Query 006662
Match_columns 636
No_of_seqs 692 out of 3256
Neff 6.3
Searched_HMMs 29240
Date Mon Mar 25 05:36:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006662.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006662hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3h2b_A SAM-dependent methyltra 99.6 1.8E-14 6.2E-19 139.5 13.1 135 220-359 43-178 (203)
2 4hg2_A Methyltransferase type 99.6 9.3E-15 3.2E-19 149.4 10.6 110 202-321 27-136 (257)
3 3l8d_A Methyltransferase; stru 99.5 3.4E-14 1.2E-18 140.9 12.6 157 204-371 43-205 (242)
4 1pjz_A Thiopurine S-methyltran 99.5 1.9E-14 6.4E-19 141.1 9.5 107 208-319 14-139 (203)
5 3ujc_A Phosphoethanolamine N-m 99.5 1.2E-13 4.2E-18 138.5 15.5 118 199-321 38-160 (266)
6 2p7i_A Hypothetical protein; p 99.5 9E-14 3.1E-18 137.5 14.2 136 220-360 44-196 (250)
7 1vl5_A Unknown conserved prote 99.5 6.8E-14 2.3E-18 141.0 12.7 110 206-321 27-141 (260)
8 3dh0_A SAM dependent methyltra 99.5 1.6E-13 5.4E-18 134.2 14.9 154 207-371 28-194 (219)
9 2o57_A Putative sarcosine dime 99.5 1E-13 3.6E-18 142.4 13.4 116 200-321 62-188 (297)
10 3dli_A Methyltransferase; PSI- 99.5 4.7E-14 1.6E-18 140.7 10.1 150 201-358 25-179 (240)
11 3g5l_A Putative S-adenosylmeth 99.5 1.1E-13 3.8E-18 138.7 12.7 109 207-321 35-146 (253)
12 1nkv_A Hypothetical protein YJ 99.5 1.4E-13 4.8E-18 137.8 13.5 114 201-321 21-141 (256)
13 3dlc_A Putative S-adenosyl-L-m 99.5 4.2E-13 1.4E-17 130.2 16.4 152 201-359 29-199 (219)
14 1xtp_A LMAJ004091AAA; SGPP, st 99.5 8.6E-14 2.9E-18 139.0 11.7 150 203-359 80-234 (254)
15 3jwg_A HEN1, methyltransferase 99.5 3.4E-13 1.2E-17 132.2 15.7 161 202-372 15-212 (219)
16 3hnr_A Probable methyltransfer 99.5 1.4E-13 4.7E-18 134.8 12.7 107 208-321 37-146 (220)
17 3i9f_A Putative type 11 methyl 99.5 2.1E-13 7.1E-18 128.3 11.6 134 210-359 11-144 (170)
18 3lcc_A Putative methyl chlorid 99.5 5.2E-13 1.8E-17 132.5 14.5 129 220-359 68-203 (235)
19 4gek_A TRNA (CMO5U34)-methyltr 99.5 2.7E-13 9.4E-18 138.7 12.8 100 215-321 69-179 (261)
20 3bus_A REBM, methyltransferase 99.5 4.6E-13 1.6E-17 135.5 14.1 116 200-321 45-167 (273)
21 2gb4_A Thiopurine S-methyltran 99.4 6.4E-13 2.2E-17 135.3 14.6 98 220-320 70-191 (252)
22 3kkz_A Uncharacterized protein 99.4 1.1E-12 3.9E-17 132.8 16.4 113 202-321 31-151 (267)
23 1xxl_A YCGJ protein; structura 99.4 4.2E-13 1.4E-17 134.0 13.0 112 204-321 9-125 (239)
24 3ccf_A Cyclopropane-fatty-acyl 99.4 5.9E-13 2E-17 135.8 14.0 108 207-321 48-155 (279)
25 3e23_A Uncharacterized protein 99.4 2.9E-13 1E-17 132.0 11.0 132 220-359 45-178 (211)
26 2p35_A Trans-aconitate 2-methy 99.4 3.9E-13 1.3E-17 134.6 12.0 110 205-321 22-133 (259)
27 2yqz_A Hypothetical protein TT 99.4 6.1E-13 2.1E-17 133.3 13.4 97 219-319 40-140 (263)
28 3vc1_A Geranyl diphosphate 2-C 99.4 1.2E-12 4.1E-17 136.1 16.1 110 205-321 105-222 (312)
29 3ege_A Putative methyltransfer 99.4 3.3E-13 1.1E-17 136.7 11.1 112 202-321 20-131 (261)
30 1y8c_A S-adenosylmethionine-de 99.4 1.2E-12 4.3E-17 129.3 14.3 116 202-321 21-143 (246)
31 3dtn_A Putative methyltransfer 99.4 1.1E-12 3.7E-17 129.8 13.8 114 202-321 29-149 (234)
32 2xvm_A Tellurite resistance pr 99.4 9.1E-13 3.1E-17 126.3 12.8 108 208-321 24-137 (199)
33 3jwh_A HEN1; methyltransferase 99.4 7.8E-13 2.7E-17 129.6 12.6 113 202-320 15-141 (217)
34 3thr_A Glycine N-methyltransfe 99.4 3.5E-13 1.2E-17 138.0 10.6 114 202-321 43-176 (293)
35 2avn_A Ubiquinone/menaquinone 99.4 8.1E-13 2.8E-17 133.6 12.6 99 219-321 55-153 (260)
36 3cgg_A SAM-dependent methyltra 99.4 4.4E-12 1.5E-16 120.5 16.7 122 220-359 48-171 (195)
37 3f4k_A Putative methyltransfer 99.4 5.9E-13 2E-17 133.4 11.1 113 202-321 31-151 (257)
38 3pfg_A N-methyltransferase; N, 99.4 8.8E-13 3E-17 133.1 12.4 97 220-320 52-151 (263)
39 3bkw_A MLL3908 protein, S-aden 99.4 1.4E-12 4.7E-17 129.2 13.4 109 207-321 34-145 (243)
40 2ex4_A Adrenal gland protein A 99.4 7E-13 2.4E-17 132.2 11.1 134 219-359 80-221 (241)
41 3e8s_A Putative SAM dependent 99.4 1.6E-12 5.6E-17 126.7 13.5 145 207-359 43-205 (227)
42 3cc8_A Putative methyltransfer 99.4 2.3E-12 7.8E-17 125.9 14.6 144 207-359 24-181 (230)
43 3ou2_A SAM-dependent methyltra 99.4 9.6E-13 3.3E-17 128.0 11.7 109 206-321 35-147 (218)
44 4htf_A S-adenosylmethionine-de 99.4 1E-12 3.5E-17 134.3 12.1 99 219-321 69-174 (285)
45 4e2x_A TCAB9; kijanose, tetron 99.4 7.4E-14 2.5E-18 151.0 3.8 153 201-359 92-249 (416)
46 2gs9_A Hypothetical protein TT 99.4 1.5E-12 5E-17 126.8 12.6 97 218-321 36-133 (211)
47 3ofk_A Nodulation protein S; N 99.4 1.2E-12 4.3E-17 127.8 12.0 110 206-322 41-156 (216)
48 1kpg_A CFA synthase;, cyclopro 99.4 2E-12 7E-17 132.1 13.5 112 202-321 50-169 (287)
49 3mgg_A Methyltransferase; NYSG 99.4 2.7E-12 9.1E-17 130.3 14.0 99 219-321 38-143 (276)
50 3g5t_A Trans-aconitate 3-methy 99.4 1.9E-12 6.6E-17 133.5 12.9 111 202-320 23-149 (299)
51 1dus_A MJ0882; hypothetical pr 99.4 5.6E-12 1.9E-16 119.7 15.0 118 198-321 34-158 (194)
52 1ve3_A Hypothetical protein PH 99.4 3E-12 1E-16 125.4 12.6 100 219-321 39-143 (227)
53 2kw5_A SLR1183 protein; struct 99.3 5E-12 1.7E-16 122.2 12.8 97 221-322 32-133 (202)
54 3sm3_A SAM-dependent methyltra 99.3 4.5E-12 1.5E-16 124.4 12.6 100 220-323 32-144 (235)
55 3hem_A Cyclopropane-fatty-acyl 99.3 5.8E-12 2E-16 130.1 14.0 112 201-321 57-184 (302)
56 3ocj_A Putative exported prote 99.3 1.3E-11 4.4E-16 127.9 16.4 97 220-321 120-228 (305)
57 3mti_A RRNA methylase; SAM-dep 99.3 8.2E-12 2.8E-16 119.1 13.2 99 220-321 24-136 (185)
58 2aot_A HMT, histamine N-methyl 99.3 3.2E-12 1.1E-16 131.7 10.8 100 218-321 52-173 (292)
59 3gu3_A Methyltransferase; alph 99.3 8.3E-12 2.8E-16 128.1 13.6 113 203-322 8-128 (284)
60 2fk8_A Methoxy mycolic acid sy 99.3 5.7E-12 1.9E-16 131.0 12.4 112 202-321 76-195 (318)
61 4fsd_A Arsenic methyltransfera 99.3 8.2E-12 2.8E-16 134.1 14.0 98 220-321 85-204 (383)
62 2p8j_A S-adenosylmethionine-de 99.3 4.9E-12 1.7E-16 122.5 11.1 99 220-321 25-129 (209)
63 3bxo_A N,N-dimethyltransferase 99.3 5.6E-12 1.9E-16 124.4 11.5 99 219-321 41-142 (239)
64 1vlm_A SAM-dependent methyltra 99.3 7.4E-12 2.5E-16 123.1 12.2 130 220-359 49-184 (219)
65 3m70_A Tellurite resistance pr 99.3 1.1E-11 3.7E-16 126.7 13.4 97 220-320 122-223 (286)
66 2pxx_A Uncharacterized protein 99.3 5E-12 1.7E-16 122.4 10.3 113 202-321 30-160 (215)
67 3htx_A HEN1; HEN1, small RNA m 99.3 1.2E-11 4E-16 142.8 14.8 123 195-323 700-837 (950)
68 3grz_A L11 mtase, ribosomal pr 99.3 2.2E-11 7.5E-16 118.2 13.5 146 199-372 41-198 (205)
69 3iv6_A Putative Zn-dependent a 99.3 8.7E-12 3E-16 127.8 10.9 111 204-321 33-149 (261)
70 3p9n_A Possible methyltransfer 99.3 1.9E-11 6.4E-16 117.5 11.9 132 185-321 12-154 (189)
71 2a14_A Indolethylamine N-methy 99.3 4.8E-12 1.6E-16 128.7 7.8 148 206-359 43-234 (263)
72 1zx0_A Guanidinoacetate N-meth 99.3 9.9E-12 3.4E-16 123.8 9.7 113 201-320 46-170 (236)
73 2i62_A Nicotinamide N-methyltr 99.3 7.8E-12 2.7E-16 125.4 9.0 146 208-359 46-235 (265)
74 3g07_A 7SK snRNA methylphospha 99.3 7.7E-12 2.6E-16 129.3 9.0 100 219-321 47-221 (292)
75 3g2m_A PCZA361.24; SAM-depende 99.3 1.1E-11 3.8E-16 127.8 10.2 113 203-322 70-192 (299)
76 1wzn_A SAM-dependent methyltra 99.3 3.2E-11 1.1E-15 120.5 13.2 99 219-321 42-146 (252)
77 2g72_A Phenylethanolamine N-me 99.3 7.8E-12 2.7E-16 128.3 8.7 151 203-359 56-252 (289)
78 3e05_A Precorrin-6Y C5,15-meth 99.3 1.6E-10 5.5E-15 112.1 17.6 129 202-356 26-161 (204)
79 2vdw_A Vaccinia virus capping 99.2 1.7E-11 5.8E-16 128.0 10.6 100 219-321 49-170 (302)
80 2zfu_A Nucleomethylin, cerebra 99.2 6.1E-11 2.1E-15 115.8 13.0 119 220-371 69-192 (215)
81 3njr_A Precorrin-6Y methylase; 99.2 2.2E-10 7.5E-15 112.3 16.9 107 204-321 43-155 (204)
82 1ri5_A MRNA capping enzyme; me 99.2 2.4E-11 8.3E-16 123.9 10.1 99 220-321 66-175 (298)
83 3m33_A Uncharacterized protein 99.2 1.7E-11 5.8E-16 121.4 8.7 88 220-317 50-139 (226)
84 3bgv_A MRNA CAP guanine-N7 met 99.2 2.4E-11 8.2E-16 126.2 9.9 114 204-321 20-156 (313)
85 3hm2_A Precorrin-6Y C5,15-meth 99.2 1.7E-10 5.9E-15 108.5 14.8 109 202-321 11-128 (178)
86 3mq2_A 16S rRNA methyltransfer 99.2 3.1E-11 1.1E-15 118.3 9.9 136 220-359 29-180 (218)
87 3dmg_A Probable ribosomal RNA 99.2 6.2E-11 2.1E-15 127.8 13.0 117 202-321 217-341 (381)
88 3d2l_A SAM-dependent methyltra 99.2 8.3E-11 2.8E-15 116.3 13.0 111 202-321 21-138 (243)
89 1p91_A Ribosomal RNA large sub 99.2 3.7E-11 1.3E-15 121.5 10.5 92 219-321 86-179 (269)
90 3bkx_A SAM-dependent methyltra 99.2 3.6E-11 1.2E-15 121.7 9.9 113 203-321 30-160 (275)
91 3ggd_A SAM-dependent methyltra 99.2 3.5E-11 1.2E-15 119.9 9.0 99 220-321 58-164 (245)
92 3lbf_A Protein-L-isoaspartate 99.2 1.2E-10 4.3E-15 113.1 12.7 109 202-322 63-176 (210)
93 2yxd_A Probable cobalt-precorr 99.2 3.3E-10 1.1E-14 106.5 14.8 108 201-321 20-132 (183)
94 3hp7_A Hemolysin, putative; st 99.2 2.6E-10 8.9E-15 118.6 15.2 132 219-358 86-227 (291)
95 1vbf_A 231AA long hypothetical 99.2 1.3E-10 4.6E-15 114.6 12.4 109 202-322 56-167 (231)
96 3orh_A Guanidinoacetate N-meth 99.2 2.7E-11 9.4E-16 121.4 7.4 112 202-320 47-170 (236)
97 2r3s_A Uncharacterized protein 99.2 4.1E-10 1.4E-14 117.5 16.1 111 204-321 151-272 (335)
98 3evz_A Methyltransferase; NYSG 99.2 8.4E-10 2.9E-14 108.8 17.5 120 220-358 57-201 (230)
99 1yzh_A TRNA (guanine-N(7)-)-me 99.2 2.3E-10 8E-15 112.1 13.4 98 220-321 43-157 (214)
100 2fca_A TRNA (guanine-N(7)-)-me 99.2 1.7E-10 5.8E-15 113.7 12.3 98 220-321 40-154 (213)
101 3q87_B N6 adenine specific DNA 99.2 1.9E-10 6.5E-15 109.3 12.1 113 220-359 25-145 (170)
102 2ift_A Putative methylase HI07 99.2 1E-10 3.5E-15 114.2 10.5 116 201-323 37-166 (201)
103 1xdz_A Methyltransferase GIDB; 99.1 5.3E-10 1.8E-14 111.8 15.2 116 220-358 72-197 (240)
104 3lpm_A Putative methyltransfer 99.1 4.4E-10 1.5E-14 113.7 14.8 118 197-321 31-177 (259)
105 2nxc_A L11 mtase, ribosomal pr 99.1 1.5E-10 5.2E-15 117.3 11.1 115 220-359 122-240 (254)
106 3v97_A Ribosomal RNA large sub 99.1 1.2E-10 4.1E-15 134.7 11.7 123 477-601 540-679 (703)
107 1ws6_A Methyltransferase; stru 99.1 6.1E-11 2.1E-15 110.7 7.5 116 199-322 22-149 (171)
108 1l3i_A Precorrin-6Y methyltran 99.1 7.7E-10 2.6E-14 104.6 14.7 110 202-321 19-135 (192)
109 3eey_A Putative rRNA methylase 99.1 3.6E-10 1.2E-14 108.8 12.6 102 215-321 21-140 (197)
110 3dxy_A TRNA (guanine-N(7)-)-me 99.1 3.6E-10 1.2E-14 112.3 12.7 98 220-321 36-151 (218)
111 2fhp_A Methylase, putative; al 99.1 2.3E-10 7.7E-15 108.6 10.8 127 187-321 15-155 (187)
112 4dcm_A Ribosomal RNA large sub 99.1 5.5E-10 1.9E-14 120.0 14.9 152 195-370 201-366 (375)
113 3uwp_A Histone-lysine N-methyl 99.1 7.3E-11 2.5E-15 127.7 7.9 118 197-321 154-289 (438)
114 3gwz_A MMCR; methyltransferase 99.1 7.6E-10 2.6E-14 118.1 15.6 108 206-321 192-308 (369)
115 2fyt_A Protein arginine N-meth 99.1 2.6E-10 9E-15 120.7 11.8 111 202-318 50-169 (340)
116 3fpf_A Mtnas, putative unchara 99.1 5.6E-10 1.9E-14 116.2 13.4 101 210-321 116-223 (298)
117 1af7_A Chemotaxis receptor met 99.1 3.5E-10 1.2E-14 116.6 11.6 99 219-320 106-252 (274)
118 2pwy_A TRNA (adenine-N(1)-)-me 99.1 1.1E-09 3.6E-14 109.6 14.6 105 206-321 86-199 (258)
119 2fpo_A Methylase YHHF; structu 99.1 5.5E-10 1.9E-14 109.1 12.1 115 200-321 37-161 (202)
120 1ej0_A FTSJ; methyltransferase 99.1 2E-10 6.8E-15 106.7 8.3 104 206-321 11-137 (180)
121 1fbn_A MJ fibrillarin homologu 99.1 1.4E-09 4.9E-14 107.9 15.0 90 220-319 76-177 (230)
122 2qe6_A Uncharacterized protein 99.1 6.8E-10 2.3E-14 114.1 12.8 115 203-321 63-197 (274)
123 1i9g_A Hypothetical protein RV 99.1 1.2E-09 4.2E-14 110.9 14.6 106 205-321 88-204 (280)
124 3q7e_A Protein arginine N-meth 99.1 7.1E-10 2.4E-14 117.8 13.1 111 203-319 53-172 (349)
125 2pjd_A Ribosomal RNA small sub 99.1 4.1E-10 1.4E-14 119.1 11.2 116 199-321 179-304 (343)
126 3g89_A Ribosomal RNA small sub 99.1 1.5E-09 5.1E-14 110.0 14.9 118 218-358 80-207 (249)
127 2esr_A Methyltransferase; stru 99.1 1.6E-10 5.5E-15 109.3 7.2 114 201-321 15-139 (177)
128 2ld4_A Anamorsin; methyltransf 99.1 2.9E-10 9.8E-15 107.8 8.9 112 219-355 13-128 (176)
129 1nt2_A Fibrillarin-like PRE-rR 99.1 5.3E-10 1.8E-14 110.3 11.2 94 220-321 59-162 (210)
130 3mcz_A O-methyltransferase; ad 99.1 4.7E-10 1.6E-14 118.2 11.5 159 207-371 169-350 (352)
131 3i53_A O-methyltransferase; CO 99.1 3.9E-10 1.3E-14 118.1 10.7 97 219-321 170-275 (332)
132 2b3t_A Protein methyltransfera 99.0 2.2E-09 7.4E-14 109.6 15.5 114 201-321 95-239 (276)
133 3dp7_A SAM-dependent methyltra 99.0 7.3E-10 2.5E-14 118.0 12.4 98 219-321 180-288 (363)
134 2yxe_A Protein-L-isoaspartate 99.0 7.8E-10 2.7E-14 107.8 11.6 106 203-321 64-178 (215)
135 2frn_A Hypothetical protein PH 99.0 9.3E-10 3.2E-14 113.1 12.6 151 185-359 96-253 (278)
136 3ckk_A TRNA (guanine-N(7)-)-me 99.0 5.4E-10 1.8E-14 112.3 10.5 98 220-321 48-169 (235)
137 1yb2_A Hypothetical protein TA 99.0 1.1E-09 3.8E-14 111.9 12.6 103 207-321 101-212 (275)
138 4dzr_A Protein-(glutamine-N5) 99.0 1.3E-10 4.5E-15 112.1 5.3 115 201-320 14-165 (215)
139 3p2e_A 16S rRNA methylase; met 99.0 4.5E-10 1.5E-14 112.1 9.3 97 220-319 26-138 (225)
140 3mb5_A SAM-dependent methyltra 99.0 2.4E-09 8.1E-14 107.3 14.3 105 205-321 82-195 (255)
141 3r0q_C Probable protein argini 99.0 1.5E-09 5.2E-14 116.4 13.7 112 202-320 49-169 (376)
142 3sso_A Methyltransferase; macr 99.0 2.8E-10 9.5E-15 122.8 7.6 129 219-357 217-361 (419)
143 2y1w_A Histone-arginine methyl 99.0 8.8E-10 3E-14 116.9 11.2 112 202-320 36-155 (348)
144 3opn_A Putative hemolysin; str 99.0 1E-09 3.5E-14 110.3 11.0 145 206-359 26-180 (232)
145 1dl5_A Protein-L-isoaspartate 99.0 8.8E-10 3E-14 115.2 11.0 107 203-321 62-176 (317)
146 1qzz_A RDMB, aclacinomycin-10- 99.0 1.1E-09 3.9E-14 116.1 11.7 107 207-321 173-288 (374)
147 2ip2_A Probable phenazine-spec 99.0 1.1E-09 3.8E-14 114.5 11.4 108 205-321 157-273 (334)
148 1x19_A CRTF-related protein; m 99.0 1.6E-09 5.5E-14 114.8 12.5 109 205-321 179-296 (359)
149 1jsx_A Glucose-inhibited divis 99.0 1.4E-09 4.8E-14 105.3 11.0 109 204-321 50-166 (207)
150 3bzb_A Uncharacterized protein 99.0 3E-09 1E-13 109.4 14.0 116 200-321 63-206 (281)
151 3fzg_A 16S rRNA methylase; met 99.0 4.2E-10 1.4E-14 110.0 7.1 110 201-319 36-151 (200)
152 3lst_A CALO1 methyltransferase 99.0 1.9E-09 6.4E-14 114.0 12.8 106 207-321 175-287 (348)
153 1i1n_A Protein-L-isoaspartate 99.0 2.4E-09 8.3E-14 105.3 12.4 104 207-322 66-184 (226)
154 3gdh_A Trimethylguanosine synt 99.0 5.2E-11 1.8E-15 118.5 0.3 95 220-319 80-180 (241)
155 4df3_A Fibrillarin-like rRNA/T 99.0 1.6E-09 5.4E-14 109.2 11.1 101 212-320 73-182 (233)
156 1fp1_D Isoliquiritigenin 2'-O- 99.0 1E-09 3.5E-14 117.1 10.3 93 219-320 210-306 (372)
157 2ozv_A Hypothetical protein AT 99.0 1.9E-09 6.6E-14 109.6 11.6 109 208-321 28-171 (260)
158 3reo_A (ISO)eugenol O-methyltr 99.0 1.2E-09 4.1E-14 116.7 10.5 95 219-321 204-301 (368)
159 3tfw_A Putative O-methyltransf 99.0 1E-08 3.4E-13 103.3 16.7 95 220-321 65-171 (248)
160 3ntv_A MW1564 protein; rossman 99.0 3.7E-09 1.3E-13 105.2 13.3 106 206-320 61-176 (232)
161 1g6q_1 HnRNP arginine N-methyl 99.0 3.3E-09 1.1E-13 111.6 13.2 112 202-319 24-144 (328)
162 1jg1_A PIMT;, protein-L-isoasp 99.0 1.8E-09 6.3E-14 107.3 10.6 107 202-321 77-190 (235)
163 3p9c_A Caffeic acid O-methyltr 99.0 1.6E-09 5.6E-14 115.6 10.8 95 219-321 202-299 (364)
164 2pbf_A Protein-L-isoaspartate 99.0 2.2E-09 7.7E-14 105.6 10.7 104 206-321 68-194 (227)
165 1tw3_A COMT, carminomycin 4-O- 99.0 2.4E-09 8.1E-14 113.2 11.6 108 207-322 174-290 (360)
166 2ipx_A RRNA 2'-O-methyltransfe 98.9 1.9E-09 6.6E-14 106.9 9.9 94 220-321 79-183 (233)
167 2yvl_A TRMI protein, hypotheti 98.9 4.5E-09 1.5E-13 104.4 12.4 105 206-321 81-191 (248)
168 1o9g_A RRNA methyltransferase; 98.9 1.7E-09 5.7E-14 108.6 9.3 114 203-321 38-215 (250)
169 2bm8_A Cephalosporin hydroxyla 98.9 8.9E-10 3E-14 110.6 7.2 95 220-321 83-188 (236)
170 1o54_A SAM-dependent O-methylt 98.9 8.5E-09 2.9E-13 105.2 14.3 104 206-321 102-214 (277)
171 3e8s_A Putative SAM dependent 98.9 2.3E-09 7.7E-14 104.3 9.5 136 477-619 53-227 (227)
172 1u2z_A Histone-lysine N-methyl 98.9 4E-09 1.4E-13 115.3 12.2 113 202-321 228-360 (433)
173 2plw_A Ribosomal RNA methyltra 98.9 2E-09 6.9E-14 103.6 8.8 92 220-321 24-155 (201)
174 3dr5_A Putative O-methyltransf 98.9 1.6E-08 5.6E-13 100.5 15.3 93 221-320 59-163 (221)
175 3u81_A Catechol O-methyltransf 98.9 3E-09 1E-13 104.8 9.8 108 207-321 49-171 (221)
176 2gpy_A O-methyltransferase; st 98.9 4.1E-09 1.4E-13 104.4 10.7 107 205-320 43-160 (233)
177 3bwc_A Spermidine synthase; SA 98.9 6.6E-09 2.3E-13 108.3 12.6 99 219-321 96-211 (304)
178 3tr6_A O-methyltransferase; ce 98.9 4.7E-09 1.6E-13 103.0 10.8 94 221-321 67-175 (225)
179 1g8a_A Fibrillarin-like PRE-rR 98.9 1.4E-08 4.8E-13 100.0 13.6 94 220-320 75-178 (227)
180 1r18_A Protein-L-isoaspartate( 98.9 6.6E-09 2.2E-13 102.6 11.2 104 205-321 71-195 (227)
181 4a6d_A Hydroxyindole O-methylt 98.9 4E-08 1.4E-12 104.3 17.7 145 206-359 169-330 (353)
182 1fp2_A Isoflavone O-methyltran 98.9 5E-09 1.7E-13 110.8 10.0 93 220-321 190-289 (352)
183 3b3j_A Histone-arginine methyl 98.9 5.1E-09 1.7E-13 116.1 10.4 111 202-319 144-262 (480)
184 1ne2_A Hypothetical protein TA 98.9 2.7E-08 9.1E-13 96.1 14.1 92 219-319 52-145 (200)
185 3duw_A OMT, O-methyltransferas 98.9 2.4E-08 8E-13 98.0 13.8 105 208-321 50-168 (223)
186 2b25_A Hypothetical protein; s 98.8 6.1E-09 2.1E-13 109.4 10.0 106 205-321 94-220 (336)
187 3c3p_A Methyltransferase; NP_9 98.8 6E-09 2.1E-13 101.6 9.3 93 220-320 58-160 (210)
188 3tma_A Methyltransferase; thum 98.8 7E-09 2.4E-13 109.9 10.2 113 204-321 191-318 (354)
189 1ixk_A Methyltransferase; open 98.8 2E-08 6.7E-13 105.2 13.2 110 207-321 109-247 (315)
190 2vdv_E TRNA (guanine-N(7)-)-me 98.8 1.3E-08 4.4E-13 102.1 11.3 98 220-321 51-174 (246)
191 4azs_A Methyltransferase WBDD; 98.8 2E-09 6.7E-14 121.7 5.5 99 218-320 66-173 (569)
192 2hnk_A SAM-dependent O-methylt 98.8 6.4E-08 2.2E-12 96.4 15.7 105 207-320 51-181 (239)
193 3id6_C Fibrillarin-like rRNA/T 98.8 2.3E-08 7.9E-13 100.6 12.5 106 206-321 63-182 (232)
194 2igt_A SAM dependent methyltra 98.8 1.5E-08 5.2E-13 107.0 11.6 114 204-321 140-273 (332)
195 3hnr_A Probable methyltransfer 98.8 4E-09 1.4E-13 102.9 6.3 133 476-619 45-212 (220)
196 3dmg_A Probable ribosomal RNA 98.8 2.4E-07 8.4E-12 99.6 20.7 112 476-592 233-355 (381)
197 2h00_A Methyltransferase 10 do 98.8 3.3E-09 1.1E-13 106.5 5.7 98 219-319 66-191 (254)
198 4dcm_A Ribosomal RNA large sub 98.8 3.9E-07 1.3E-11 97.8 22.1 114 477-592 223-349 (375)
199 2wa2_A Non-structural protein 98.8 3.3E-09 1.1E-13 109.4 5.7 92 220-321 84-194 (276)
200 2xvm_A Tellurite resistance pr 98.8 5.5E-09 1.9E-13 99.8 6.6 118 477-602 33-171 (199)
201 1kpg_A CFA synthase;, cyclopro 98.8 9.4E-09 3.2E-13 104.7 8.7 108 467-579 56-168 (287)
202 3adn_A Spermidine synthase; am 98.8 1.9E-08 6.6E-13 104.6 11.1 98 219-320 84-198 (294)
203 2oxt_A Nucleoside-2'-O-methylt 98.8 4.5E-09 1.5E-13 107.8 6.2 92 220-321 76-186 (265)
204 3tm4_A TRNA (guanine N2-)-meth 98.8 4.5E-08 1.5E-12 104.8 14.3 129 203-359 205-348 (373)
205 3h2b_A SAM-dependent methyltra 98.8 1.2E-08 4E-13 98.4 8.4 135 477-618 42-194 (203)
206 3pfg_A N-methyltransferase; N, 98.8 1.6E-08 5.4E-13 101.8 9.7 135 477-619 51-249 (263)
207 3jwg_A HEN1, methyltransferase 98.8 2.2E-08 7.5E-13 97.8 10.4 140 477-619 30-210 (219)
208 3i9f_A Putative type 11 methyl 98.8 1.2E-08 4E-13 95.6 7.8 131 475-619 16-160 (170)
209 1nv8_A HEMK protein; class I a 98.8 6.2E-08 2.1E-12 100.0 13.9 114 201-321 108-250 (284)
210 3a27_A TYW2, uncharacterized p 98.8 5.2E-08 1.8E-12 99.8 13.2 93 220-321 121-220 (272)
211 3hem_A Cyclopropane-fatty-acyl 98.8 1.1E-08 3.7E-13 105.4 8.1 110 466-579 63-183 (302)
212 2nyu_A Putative ribosomal RNA 98.8 2E-08 6.8E-13 96.1 9.3 93 220-321 24-146 (196)
213 3giw_A Protein of unknown func 98.8 1.1E-08 3.9E-13 105.3 8.1 114 203-321 64-201 (277)
214 1xj5_A Spermidine synthase 1; 98.7 3.3E-08 1.1E-12 104.6 11.8 98 219-320 121-235 (334)
215 4hc4_A Protein arginine N-meth 98.7 4.6E-08 1.6E-12 105.2 13.0 116 201-319 68-188 (376)
216 3dli_A Methyltransferase; PSI- 98.7 6.6E-09 2.3E-13 103.2 5.7 97 477-579 42-140 (240)
217 3ofk_A Nodulation protein S; N 98.7 1.6E-08 5.6E-13 98.3 8.4 99 475-579 50-154 (216)
218 1zg3_A Isoflavanone 4'-O-methy 98.7 1.4E-08 4.7E-13 107.6 8.4 93 220-321 195-294 (358)
219 3cbg_A O-methyltransferase; cy 98.7 6E-08 2.1E-12 96.5 12.6 94 221-321 75-183 (232)
220 2zfu_A Nucleomethylin, cerebra 98.7 8.1E-08 2.8E-12 93.4 13.1 148 448-619 27-191 (215)
221 1y8c_A S-adenosylmethionine-de 98.7 5E-08 1.7E-12 96.0 11.7 98 476-578 37-141 (246)
222 2avd_A Catechol-O-methyltransf 98.7 8.1E-08 2.8E-12 94.4 13.1 95 220-321 71-180 (229)
223 3mti_A RRNA methylase; SAM-dep 98.7 1.6E-08 5.6E-13 96.1 7.7 139 477-618 23-183 (185)
224 3dou_A Ribosomal RNA large sub 98.7 2.8E-08 9.6E-13 96.5 9.4 93 220-321 27-140 (191)
225 3r3h_A O-methyltransferase, SA 98.7 1.5E-08 5E-13 102.1 7.6 95 220-321 62-171 (242)
226 3ocj_A Putative exported prote 98.7 1.9E-08 6.4E-13 104.0 8.4 137 477-619 119-304 (305)
227 2p7i_A Hypothetical protein; p 98.7 7.9E-09 2.7E-13 101.8 5.3 96 477-579 43-141 (250)
228 3gjy_A Spermidine synthase; AP 98.7 3.5E-08 1.2E-12 103.7 10.4 97 220-320 91-200 (317)
229 1zq9_A Probable dimethyladenos 98.7 1.6E-08 5.4E-13 104.4 7.7 107 202-316 14-143 (285)
230 3ajd_A Putative methyltransfer 98.7 4.4E-08 1.5E-12 100.3 10.6 108 209-321 76-212 (274)
231 1xtp_A LMAJ004091AAA; SGPP, st 98.7 7.9E-09 2.7E-13 102.9 4.8 130 466-601 84-235 (254)
232 3dlc_A Putative S-adenosyl-L-m 98.7 2.8E-08 9.5E-13 96.0 8.6 94 479-579 46-148 (219)
233 1uir_A Polyamine aminopropyltr 98.7 4E-08 1.4E-12 102.9 10.3 98 219-320 78-195 (314)
234 2pt6_A Spermidine synthase; tr 98.7 6E-08 2.1E-12 102.0 11.6 99 219-321 117-231 (321)
235 1iy9_A Spermidine synthase; ro 98.7 5.3E-08 1.8E-12 100.1 10.7 98 219-320 76-189 (275)
236 1wy7_A Hypothetical protein PH 98.7 6E-07 2E-11 86.7 17.6 93 219-319 50-148 (207)
237 1inl_A Spermidine synthase; be 98.7 1E-07 3.4E-12 99.0 12.8 99 219-321 91-206 (296)
238 2o07_A Spermidine synthase; st 98.7 4.2E-08 1.4E-12 102.4 9.8 98 219-320 96-209 (304)
239 4e2x_A TCAB9; kijanose, tetron 98.7 1.2E-08 4E-13 110.1 5.8 144 450-601 81-250 (416)
240 1sui_A Caffeoyl-COA O-methyltr 98.7 2.9E-08 1E-12 100.2 8.3 94 220-320 81-190 (247)
241 2fk8_A Methoxy mycolic acid sy 98.7 2.8E-08 9.7E-13 102.9 8.4 101 475-579 89-194 (318)
242 4hg2_A Methyltransferase type 98.7 1E-08 3.5E-13 104.5 4.9 94 477-578 40-134 (257)
243 3ou2_A SAM-dependent methyltra 98.7 1.5E-08 5.2E-13 98.1 5.9 100 477-580 47-147 (218)
244 2qm3_A Predicted methyltransfe 98.7 2.6E-07 8.9E-12 98.8 16.0 96 219-320 173-278 (373)
245 2b2c_A Spermidine synthase; be 98.7 3.9E-08 1.3E-12 103.2 9.3 98 219-320 109-222 (314)
246 1vl5_A Unknown conserved prote 98.7 2.2E-08 7.6E-13 100.5 6.9 97 475-579 36-140 (260)
247 1xdz_A Methyltransferase GIDB; 98.7 1.4E-07 4.9E-12 94.0 12.6 161 452-623 47-223 (240)
248 2i7c_A Spermidine synthase; tr 98.7 6.4E-08 2.2E-12 99.8 10.1 99 219-321 79-193 (283)
249 3kkz_A Uncharacterized protein 98.6 3.4E-08 1.1E-12 99.7 7.5 97 475-579 45-150 (267)
250 3e05_A Precorrin-6Y C5,15-meth 98.6 8E-08 2.7E-12 93.0 9.9 147 443-600 10-164 (204)
251 2cmg_A Spermidine synthase; tr 98.6 8.8E-08 3E-12 97.9 10.6 90 219-320 73-171 (262)
252 2yxd_A Probable cobalt-precorr 98.6 4.3E-08 1.5E-12 91.9 7.5 110 477-601 36-154 (183)
253 3orh_A Guanidinoacetate N-meth 98.6 1.5E-08 5E-13 101.5 4.4 101 476-578 60-169 (236)
254 3ujc_A Phosphoethanolamine N-m 98.6 1.1E-08 3.9E-13 102.1 3.5 99 475-579 54-159 (266)
255 3e23_A Uncharacterized protein 98.6 3.8E-08 1.3E-12 95.5 7.1 119 477-601 44-179 (211)
256 1dus_A MJ0882; hypothetical pr 98.6 3.1E-08 1.1E-12 93.6 6.2 132 476-618 52-193 (194)
257 2yxl_A PH0851 protein, 450AA l 98.6 1.9E-07 6.6E-12 102.4 13.4 109 207-321 250-390 (450)
258 3njr_A Precorrin-6Y methylase; 98.6 8.1E-08 2.8E-12 93.9 9.2 143 443-599 25-175 (204)
259 3thr_A Glycine N-methyltransfe 98.6 2E-08 6.8E-13 102.5 5.0 100 477-580 58-176 (293)
260 2p41_A Type II methyltransfera 98.6 2.2E-08 7.6E-13 104.6 5.4 99 220-321 84-192 (305)
261 1nkv_A Hypothetical protein YJ 98.6 2.9E-08 9.9E-13 99.0 5.8 96 476-579 36-140 (256)
262 3l8d_A Methyltransferase; stru 98.6 3.1E-08 1.1E-12 97.8 5.9 118 477-600 54-196 (242)
263 3g5l_A Putative S-adenosylmeth 98.6 4.9E-08 1.7E-12 97.4 7.3 106 466-579 35-145 (253)
264 3f4k_A Putative methyltransfer 98.6 3.9E-08 1.3E-12 98.1 6.5 95 477-579 47-150 (257)
265 1xxl_A YCGJ protein; structura 98.6 4.4E-08 1.5E-12 97.4 6.9 98 475-579 20-124 (239)
266 2i62_A Nicotinamide N-methyltr 98.6 1.2E-07 4.2E-12 94.6 10.1 142 475-619 55-261 (265)
267 2b78_A Hypothetical protein SM 98.6 1.3E-07 4.5E-12 101.7 11.0 99 220-321 214-332 (385)
268 3dh0_A SAM dependent methyltra 98.6 5.8E-08 2E-12 94.5 7.5 135 475-619 36-193 (219)
269 3c3y_A Pfomt, O-methyltransfer 98.6 9.6E-08 3.3E-12 95.6 9.2 94 220-320 72-181 (237)
270 2o57_A Putative sarcosine dime 98.6 4.8E-08 1.6E-12 100.0 7.1 96 476-579 82-187 (297)
271 3eey_A Putative rRNA methylase 98.6 6.6E-08 2.2E-12 92.8 7.6 142 477-620 23-189 (197)
272 1vlm_A SAM-dependent methyltra 98.6 9.5E-08 3.2E-12 93.6 8.9 110 477-599 48-183 (219)
273 4htf_A S-adenosylmethionine-de 98.6 5.5E-08 1.9E-12 99.1 7.4 107 466-580 60-174 (285)
274 3ccf_A Cyclopropane-fatty-acyl 98.6 6.1E-08 2.1E-12 98.6 7.6 97 475-579 56-154 (279)
275 3hp7_A Hemolysin, putative; st 98.6 1.2E-07 4.2E-12 98.5 9.9 134 476-619 85-250 (291)
276 1mjf_A Spermidine synthase; sp 98.6 1.1E-07 3.6E-12 98.0 9.3 97 219-320 76-193 (281)
277 3hm2_A Precorrin-6Y C5,15-meth 98.6 1.3E-07 4.3E-12 88.7 9.0 116 475-599 24-148 (178)
278 4gek_A TRNA (CMO5U34)-methyltr 98.6 2.5E-08 8.6E-13 101.8 4.5 103 477-580 71-179 (261)
279 2ex4_A Adrenal gland protein A 98.6 2.9E-08 1E-12 98.6 4.9 123 476-602 79-223 (241)
280 4dmg_A Putative uncharacterize 98.6 3.1E-07 1.1E-11 99.3 13.2 99 220-321 216-327 (393)
281 3k6r_A Putative transferase PH 98.6 4.9E-07 1.7E-11 93.3 14.1 149 185-357 96-251 (278)
282 3grz_A L11 mtase, ribosomal pr 98.6 6E-08 2E-12 93.8 6.8 117 477-602 61-183 (205)
283 3lec_A NADB-rossmann superfami 98.6 3.3E-07 1.1E-11 92.1 12.4 127 205-360 12-146 (230)
284 3lcc_A Putative methyl chlorid 98.6 2.2E-07 7.5E-12 91.8 10.8 121 478-602 68-205 (235)
285 3bus_A REBM, methyltransferase 98.6 3.7E-08 1.3E-12 99.3 5.3 100 475-579 60-166 (273)
286 3gu3_A Methyltransferase; alph 98.6 9.2E-08 3.2E-12 97.8 8.0 99 475-581 21-128 (284)
287 2yqz_A Hypothetical protein TT 98.6 1.2E-07 4.1E-12 94.6 8.5 95 476-578 39-140 (263)
288 3gnl_A Uncharacterized protein 98.5 3.9E-07 1.3E-11 92.3 12.2 127 205-360 12-146 (244)
289 3m70_A Tellurite resistance pr 98.5 4.6E-08 1.6E-12 99.7 5.4 117 477-601 121-257 (286)
290 3mgg_A Methyltransferase; NYSG 98.5 4.6E-08 1.6E-12 98.9 5.3 98 475-579 36-142 (276)
291 1sqg_A SUN protein, FMU protei 98.5 2E-07 7E-12 101.5 10.7 110 206-321 236-375 (429)
292 3g5t_A Trans-aconitate 3-methy 98.5 8.2E-08 2.8E-12 98.7 7.1 96 475-577 35-147 (299)
293 2h1r_A Dimethyladenosine trans 98.5 1.7E-07 5.7E-12 97.5 9.5 87 202-296 28-119 (299)
294 3evz_A Methyltransferase; NYSG 98.5 1.6E-07 5.5E-12 92.3 8.9 138 477-618 56-219 (230)
295 1wzn_A SAM-dependent methyltra 98.5 1E-07 3.5E-12 94.9 7.2 114 459-579 25-145 (252)
296 3sm3_A SAM-dependent methyltra 98.5 1.2E-07 4.3E-12 92.5 7.7 100 477-579 31-141 (235)
297 3ege_A Putative methyltransfer 98.5 7.9E-08 2.7E-12 97.0 6.3 97 475-579 33-130 (261)
298 3dtn_A Putative methyltransfer 98.5 1E-07 3.5E-12 93.8 6.9 101 475-579 43-148 (234)
299 3c0k_A UPF0064 protein YCCW; P 98.5 6.1E-07 2.1E-11 96.6 13.5 100 220-322 222-341 (396)
300 3bkw_A MLL3908 protein, S-aden 98.5 7.4E-08 2.5E-12 95.0 5.8 98 475-579 42-144 (243)
301 1pjz_A Thiopurine S-methyltran 98.5 4.4E-08 1.5E-12 95.5 4.2 121 477-602 23-174 (203)
302 1zx0_A Guanidinoacetate N-meth 98.5 4.5E-08 1.5E-12 97.2 4.3 102 476-580 60-171 (236)
303 2gs9_A Hypothetical protein TT 98.5 1.9E-07 6.4E-12 90.4 8.6 96 476-580 36-133 (211)
304 1l3i_A Precorrin-6Y methyltran 98.5 1.1E-07 3.7E-12 89.6 6.7 116 476-601 33-157 (192)
305 1jsx_A Glucose-inhibited divis 98.5 1.7E-07 5.8E-12 90.5 8.2 129 477-619 66-205 (207)
306 3jwh_A HEN1; methyltransferase 98.5 2.2E-07 7.4E-12 90.7 8.9 104 477-582 30-144 (217)
307 2aot_A HMT, histamine N-methyl 98.5 6E-08 2E-12 99.6 5.1 101 475-579 51-172 (292)
308 3d2l_A SAM-dependent methyltra 98.5 2.7E-07 9.3E-12 90.9 9.6 95 478-578 35-136 (243)
309 3vc1_A Geranyl diphosphate 2-C 98.5 1.2E-07 4E-12 98.3 7.2 107 466-579 107-221 (312)
310 3m6w_A RRNA methylase; rRNA me 98.5 2E-07 6.9E-12 102.8 9.1 109 208-321 93-230 (464)
311 2f8l_A Hypothetical protein LM 98.5 3E-07 1E-11 97.0 10.1 100 218-321 130-257 (344)
312 3kr9_A SAM-dependent methyltra 98.5 7.4E-07 2.5E-11 89.3 12.3 125 206-360 7-140 (225)
313 2pxx_A Uncharacterized protein 98.5 5E-08 1.7E-12 94.0 3.6 135 477-618 43-197 (215)
314 2p35_A Trans-aconitate 2-methy 98.5 1.5E-07 5.2E-12 93.8 7.2 105 467-579 25-132 (259)
315 3cgg_A SAM-dependent methyltra 98.5 2.6E-07 8.8E-12 87.3 8.3 137 477-619 47-195 (195)
316 3g89_A Ribosomal RNA small sub 98.5 4E-07 1.4E-11 92.1 10.2 163 451-623 56-233 (249)
317 2kw5_A SLR1183 protein; struct 98.5 2E-07 6.9E-12 89.6 7.5 93 479-579 32-131 (202)
318 2avn_A Ubiquinone/menaquinone 98.5 1.7E-07 5.8E-12 94.3 7.3 96 477-580 55-153 (260)
319 3frh_A 16S rRNA methylase; met 98.5 2.7E-07 9.3E-12 93.2 8.6 98 217-319 104-205 (253)
320 3cc8_A Putative methyltransfer 98.5 1.2E-07 4E-12 92.3 5.8 98 476-580 32-131 (230)
321 2as0_A Hypothetical protein PH 98.5 7.1E-07 2.4E-11 96.0 12.4 99 220-321 219-336 (396)
322 3lpm_A Putative methyltransfer 98.5 4E-07 1.4E-11 91.9 9.7 122 476-599 49-196 (259)
323 3bxo_A N,N-dimethyltransferase 98.5 6.7E-08 2.3E-12 95.0 3.8 118 455-579 21-141 (239)
324 2frx_A Hypothetical protein YE 98.5 6.1E-07 2.1E-11 99.4 11.8 109 208-321 107-247 (479)
325 3opn_A Putative hemolysin; str 98.5 5.7E-07 1.9E-11 90.2 10.5 134 476-619 37-202 (232)
326 1qam_A ERMC' methyltransferase 98.4 4.9E-07 1.7E-11 91.1 9.8 85 202-292 16-104 (244)
327 2jjq_A Uncharacterized RNA met 98.4 1.8E-06 6.3E-11 94.1 14.9 92 220-320 292-387 (425)
328 1uwv_A 23S rRNA (uracil-5-)-me 98.4 9.8E-07 3.3E-11 96.3 12.8 110 201-320 271-389 (433)
329 3fpf_A Mtnas, putative unchara 98.4 2.1E-07 7.3E-12 96.8 7.2 132 475-618 121-263 (298)
330 2yx1_A Hypothetical protein MJ 98.4 1E-06 3.4E-11 93.0 12.3 90 220-321 197-292 (336)
331 2a14_A Indolethylamine N-methy 98.4 2.5E-07 8.5E-12 93.7 7.1 123 475-599 54-233 (263)
332 1wxx_A TT1595, hypothetical pr 98.4 6.5E-07 2.2E-11 96.0 10.6 100 219-321 210-326 (382)
333 4dzr_A Protein-(glutamine-N5) 98.4 2.4E-07 8.1E-12 89.1 6.2 141 476-619 30-205 (215)
334 2nxc_A L11 mtase, ribosomal pr 98.4 3.2E-07 1.1E-11 92.8 7.4 126 477-618 121-254 (254)
335 3v97_A Ribosomal RNA large sub 98.4 7.1E-07 2.4E-11 103.3 11.2 100 220-322 541-659 (703)
336 3m4x_A NOL1/NOP2/SUN family pr 98.4 1E-06 3.5E-11 97.0 11.7 109 208-321 97-235 (456)
337 3lcv_B Sisomicin-gentamicin re 98.4 2.7E-07 9.4E-12 94.1 6.5 110 202-319 120-235 (281)
338 1yub_A Ermam, rRNA methyltrans 98.4 1.7E-08 5.8E-13 101.5 -2.5 110 204-320 17-145 (245)
339 1ve3_A Hypothetical protein PH 98.4 3.6E-07 1.2E-11 89.1 7.0 99 477-581 39-144 (227)
340 2gb4_A Thiopurine S-methyltran 98.4 2E-07 6.9E-12 94.5 5.4 121 477-602 69-225 (252)
341 3ggd_A SAM-dependent methyltra 98.4 1.2E-07 4E-12 94.2 3.6 99 477-579 57-163 (245)
342 3g2m_A PCZA361.24; SAM-depende 98.4 1.5E-07 5.1E-12 96.7 4.5 95 479-579 85-190 (299)
343 2ih2_A Modification methylase 98.4 4.5E-07 1.6E-11 97.4 8.4 110 202-321 25-165 (421)
344 2p8j_A S-adenosylmethionine-de 98.4 2.8E-07 9.5E-12 88.8 6.0 97 477-579 24-128 (209)
345 3r0q_C Probable protein argini 98.4 4.6E-07 1.6E-11 97.1 7.6 100 475-578 62-168 (376)
346 3gru_A Dimethyladenosine trans 98.4 1.1E-06 3.8E-11 91.4 10.3 86 202-292 36-124 (295)
347 1nt2_A Fibrillarin-like PRE-rR 98.4 7.4E-07 2.5E-11 87.7 8.4 97 476-578 57-160 (210)
348 2b3t_A Protein methyltransfera 98.3 6.4E-07 2.2E-11 91.2 7.8 136 477-618 110-275 (276)
349 3iv6_A Putative Zn-dependent a 98.3 4E-07 1.4E-11 93.1 6.3 121 475-600 44-173 (261)
350 2vdw_A Vaccinia virus capping 98.3 1.8E-07 6.3E-12 97.4 3.7 103 477-581 49-171 (302)
351 4fsd_A Arsenic methyltransfera 98.3 2.3E-07 8E-12 99.4 4.1 118 476-599 83-246 (383)
352 3g07_A 7SK snRNA methylphospha 98.3 7.7E-08 2.6E-12 99.2 0.2 102 476-579 46-220 (292)
353 3q87_B N6 adenine specific DNA 98.3 1.6E-06 5.6E-11 81.9 9.3 128 478-617 25-160 (170)
354 2fca_A TRNA (guanine-N(7)-)-me 98.3 8.1E-07 2.8E-11 87.3 7.3 118 477-599 39-174 (213)
355 2okc_A Type I restriction enzy 98.3 1.6E-06 5.5E-11 94.9 10.4 114 202-321 157-308 (445)
356 3bkx_A SAM-dependent methyltra 98.3 1E-06 3.5E-11 88.8 8.2 111 462-579 30-159 (275)
357 2g72_A Phenylethanolamine N-me 98.3 2.7E-07 9.1E-12 94.4 3.8 122 476-599 71-251 (289)
358 2fyt_A Protein arginine N-meth 98.3 4.3E-07 1.5E-11 96.0 5.5 97 476-576 64-168 (340)
359 2frn_A Hypothetical protein PH 98.3 1E-06 3.6E-11 90.3 8.1 115 477-600 126-253 (278)
360 1ri5_A MRNA capping enzyme; me 98.3 3E-07 1E-11 93.4 3.8 101 477-581 65-176 (298)
361 3tfw_A Putative O-methyltransf 98.3 2.2E-06 7.6E-11 86.1 10.0 133 477-619 64-225 (248)
362 3ntv_A MW1564 protein; rossman 98.3 1.1E-06 3.7E-11 87.3 7.6 130 477-619 72-231 (232)
363 1yzh_A TRNA (guanine-N(7)-)-me 98.3 1.7E-06 6E-11 84.3 8.5 122 477-600 42-178 (214)
364 3q7e_A Protein arginine N-meth 98.3 4.4E-07 1.5E-11 96.2 4.5 98 477-578 67-172 (349)
365 3dxy_A TRNA (guanine-N(7)-)-me 98.2 6.9E-07 2.3E-11 88.5 5.1 116 476-593 34-165 (218)
366 2xyq_A Putative 2'-O-methyl tr 98.2 2.5E-06 8.7E-11 88.5 9.6 87 220-321 65-172 (290)
367 3duw_A OMT, O-methyltransferas 98.2 1.2E-06 4.2E-11 85.7 6.8 133 477-619 59-222 (223)
368 2ld4_A Anamorsin; methyltransf 98.2 1.3E-06 4.6E-11 82.3 6.7 131 475-625 11-174 (176)
369 3m33_A Uncharacterized protein 98.2 3.5E-07 1.2E-11 90.2 2.8 110 477-598 49-161 (226)
370 2bm8_A Cephalosporin hydroxyla 98.2 8.6E-07 3E-11 88.8 5.7 111 478-598 83-213 (236)
371 2esr_A Methyltransferase; stru 98.2 5E-07 1.7E-11 85.1 3.2 99 477-581 32-140 (177)
372 3tr6_A O-methyltransferase; ce 98.2 1.4E-06 4.7E-11 85.3 6.4 129 477-619 65-224 (225)
373 3ckk_A TRNA (guanine-N(7)-)-me 98.2 2.1E-06 7.1E-11 86.0 7.5 116 476-595 46-185 (235)
374 3bgv_A MRNA CAP guanine-N7 met 98.2 7.4E-07 2.5E-11 92.3 3.7 103 477-581 35-157 (313)
375 3b5i_A S-adenosyl-L-methionine 98.2 3.7E-06 1.3E-10 90.2 9.3 102 219-321 53-226 (374)
376 3p9n_A Possible methyltransfer 98.2 1.1E-06 3.9E-11 83.8 4.8 123 450-580 22-154 (189)
377 3dp7_A SAM-dependent methyltra 98.2 1.6E-06 5.4E-11 92.2 6.2 99 476-579 179-287 (363)
378 1g6q_1 HnRNP arginine N-methyl 98.2 1.1E-06 3.7E-11 92.4 4.7 97 477-577 39-143 (328)
379 3u81_A Catechol O-methyltransf 98.2 8E-07 2.8E-11 87.3 3.5 133 477-619 59-213 (221)
380 1qzz_A RDMB, aclacinomycin-10- 98.1 4.5E-06 1.5E-10 88.3 9.2 140 475-619 181-356 (374)
381 1ej0_A FTSJ; methyltransferase 98.1 5.1E-06 1.7E-10 76.6 7.9 130 477-618 23-177 (180)
382 3tqs_A Ribosomal RNA small sub 98.1 5.1E-06 1.7E-10 84.6 8.5 83 202-290 15-104 (255)
383 1g8a_A Fibrillarin-like PRE-rR 98.1 8.4E-06 2.9E-10 80.0 9.7 132 476-619 73-227 (227)
384 2ift_A Putative methylase HI07 98.1 1.3E-06 4.3E-11 85.0 3.5 99 478-582 55-166 (201)
385 1ws6_A Methyltransferase; stru 98.1 6.8E-07 2.3E-11 83.0 1.3 97 477-581 42-149 (171)
386 3i53_A O-methyltransferase; CO 98.1 4.2E-06 1.4E-10 87.4 7.4 139 470-618 164-331 (332)
387 2ip2_A Probable phenazine-spec 98.1 4.5E-06 1.5E-10 87.0 7.7 105 467-579 160-272 (334)
388 1yb2_A Hypothetical protein TA 98.1 3.9E-06 1.3E-10 85.4 6.9 111 475-598 109-231 (275)
389 2qfm_A Spermine synthase; sper 98.1 8.4E-06 2.9E-10 86.9 9.7 101 217-320 187-314 (364)
390 2r3s_A Uncharacterized protein 98.1 4.9E-06 1.7E-10 86.4 7.6 137 476-619 165-335 (335)
391 3lbf_A Protein-L-isoaspartate 98.1 1.7E-06 5.7E-11 83.7 3.7 94 475-581 76-176 (210)
392 2pwy_A TRNA (adenine-N(1)-)-me 98.1 9.8E-06 3.4E-10 80.6 9.4 109 476-597 96-217 (258)
393 3evf_A RNA-directed RNA polyme 98.1 1.5E-05 5E-10 81.8 10.7 120 198-321 56-185 (277)
394 2ozv_A Hypothetical protein AT 98.1 1.1E-05 3.8E-10 81.7 9.9 121 476-598 36-188 (260)
395 3bt7_A TRNA (uracil-5-)-methyl 98.1 2.1E-05 7.2E-10 83.9 12.4 107 202-321 200-327 (369)
396 2vdv_E TRNA (guanine-N(7)-)-me 98.0 2.4E-06 8.2E-11 85.5 4.4 117 477-596 50-191 (246)
397 3p2e_A 16S rRNA methylase; met 98.0 2.6E-06 8.7E-11 84.8 4.6 98 477-577 25-137 (225)
398 2fhp_A Methylase, putative; al 98.0 1.9E-06 6.6E-11 81.2 3.5 99 477-581 45-156 (187)
399 2oxt_A Nucleoside-2'-O-methylt 98.0 1.7E-06 6E-11 88.4 3.4 134 477-618 75-227 (265)
400 3mb5_A SAM-dependent methyltra 98.0 4.6E-06 1.6E-10 83.2 6.4 107 475-595 92-211 (255)
401 1vbf_A 231AA long hypothetical 98.0 2E-06 6.9E-11 84.4 3.6 93 476-581 70-167 (231)
402 3ldu_A Putative methylase; str 98.0 1.5E-05 5.2E-10 85.7 10.7 113 203-321 182-345 (385)
403 2plw_A Ribosomal RNA methyltra 98.0 9.8E-06 3.4E-10 77.6 8.2 132 477-618 23-195 (201)
404 1fbn_A MJ fibrillarin homologu 98.0 4.8E-06 1.6E-10 82.3 6.2 96 476-578 74-177 (230)
405 1o9g_A RRNA methyltransferase; 98.0 3.6E-06 1.2E-10 84.2 5.3 103 476-581 51-216 (250)
406 2y1w_A Histone-arginine methyl 98.0 5.4E-06 1.8E-10 87.7 6.9 96 476-578 50-154 (348)
407 3id6_C Fibrillarin-like rRNA/T 98.0 8.8E-06 3E-10 81.8 8.1 95 475-578 75-180 (232)
408 2gpy_A O-methyltransferase; st 98.0 2.1E-06 7.2E-11 84.7 3.4 95 477-579 55-160 (233)
409 3gwz_A MMCR; methyltransferase 98.0 1.7E-05 5.7E-10 84.4 10.5 142 470-619 197-369 (369)
410 1p91_A Ribosomal RNA large sub 98.0 2.1E-06 7.3E-11 86.4 3.3 90 476-580 85-179 (269)
411 3sso_A Methyltransferase; macr 98.0 6.9E-07 2.4E-11 96.5 -0.5 127 461-599 203-362 (419)
412 3fut_A Dimethyladenosine trans 98.0 2.2E-05 7.5E-10 80.6 10.7 85 202-292 33-120 (271)
413 2ipx_A RRNA 2'-O-methyltransfe 98.0 1.1E-05 3.8E-10 79.6 8.1 134 476-618 77-231 (233)
414 3dou_A Ribosomal RNA large sub 98.0 4.3E-06 1.5E-10 81.0 4.8 134 477-619 26-181 (191)
415 3k0b_A Predicted N6-adenine-sp 98.0 2.1E-05 7.3E-10 84.9 10.8 113 203-321 188-351 (393)
416 1tw3_A COMT, carminomycin 4-O- 98.0 9E-06 3.1E-10 85.6 7.6 140 475-619 182-356 (360)
417 3ldg_A Putative uncharacterize 98.0 4.2E-05 1.4E-09 82.4 12.8 113 203-321 181-344 (384)
418 3mcz_A O-methyltransferase; ad 98.0 7E-06 2.4E-10 86.2 6.6 143 466-619 169-349 (352)
419 2pjd_A Ribosomal RNA small sub 98.0 5.3E-06 1.8E-10 87.5 5.6 132 477-619 197-337 (343)
420 3htx_A HEN1; HEN1, small RNA m 98.0 1.4E-05 4.7E-10 92.9 9.4 101 477-579 722-834 (950)
421 2avd_A Catechol-O-methyltransf 98.0 9.1E-06 3.1E-10 79.6 6.8 129 477-619 70-229 (229)
422 3c3p_A Methyltransferase; NP_9 97.9 6.2E-06 2.1E-10 80.0 5.4 94 477-579 57-160 (210)
423 3lst_A CALO1 methyltransferase 97.9 8E-06 2.7E-10 86.0 6.3 105 468-579 177-286 (348)
424 1mjf_A Spermidine synthase; sp 97.9 1E-05 3.5E-10 83.1 6.9 139 477-619 76-239 (281)
425 2p41_A Type II methyltransfera 97.9 2E-06 6.7E-11 89.8 1.5 98 477-578 83-190 (305)
426 3mq2_A 16S rRNA methyltransfer 97.9 6E-06 2E-10 80.4 4.8 119 476-600 27-180 (218)
427 2dul_A N(2),N(2)-dimethylguano 97.9 2.2E-05 7.6E-10 84.3 9.4 93 220-320 49-164 (378)
428 2qe6_A Uncharacterized protein 97.9 1.6E-05 5.5E-10 81.4 8.0 102 476-580 77-197 (274)
429 3r3h_A O-methyltransferase, SA 97.9 1.8E-05 6.1E-10 79.4 8.1 130 477-619 61-220 (242)
430 2yvl_A TRMI protein, hypotheti 97.9 1.1E-05 3.8E-10 79.7 6.5 104 477-594 92-206 (248)
431 1x19_A CRTF-related protein; m 97.9 1.1E-05 3.9E-10 85.0 6.8 102 471-579 186-295 (359)
432 1nv8_A HEMK protein; class I a 97.9 6.9E-06 2.3E-10 84.6 4.8 131 477-619 124-282 (284)
433 2efj_A 3,7-dimethylxanthine me 97.9 2.4E-05 8.2E-10 84.1 9.1 102 219-321 53-226 (384)
434 3dr5_A Putative O-methyltransf 97.9 2.1E-05 7.1E-10 77.9 7.8 129 477-620 57-214 (221)
435 2wa2_A Non-structural protein 97.9 5.3E-06 1.8E-10 85.4 3.3 95 477-578 83-192 (276)
436 3gdh_A Trimethylguanosine synt 97.9 4.4E-07 1.5E-11 89.9 -4.7 95 477-579 79-181 (241)
437 2hnk_A SAM-dependent O-methylt 97.9 1.4E-05 4.7E-10 79.4 6.2 130 477-620 61-232 (239)
438 2ar0_A M.ecoki, type I restric 97.9 2.6E-05 8.7E-10 87.6 9.0 115 202-321 155-313 (541)
439 3cbg_A O-methyltransferase; cy 97.9 1.3E-05 4.3E-10 79.7 5.8 130 477-619 73-232 (232)
440 2b9e_A NOL1/NOP2/SUN domain fa 97.9 0.00011 3.8E-09 76.7 13.2 108 208-321 94-235 (309)
441 1iy9_A Spermidine synthase; ro 97.8 3.3E-05 1.1E-09 79.1 8.9 143 476-620 75-237 (275)
442 2b25_A Hypothetical protein; s 97.8 1.3E-05 4.4E-10 84.0 5.9 107 477-592 106-233 (336)
443 3uzu_A Ribosomal RNA small sub 97.8 1.9E-05 6.6E-10 81.4 7.1 73 203-280 29-106 (279)
444 1i1n_A Protein-L-isoaspartate 97.8 3.8E-06 1.3E-10 82.3 1.4 93 477-580 78-183 (226)
445 3bwc_A Spermidine synthase; SA 97.8 2.5E-05 8.5E-10 81.2 7.5 142 476-619 95-258 (304)
446 1inl_A Spermidine synthase; be 97.8 2.5E-05 8.7E-10 80.8 7.4 142 477-620 91-253 (296)
447 2igt_A SAM dependent methyltra 97.8 1.1E-05 3.6E-10 85.2 4.6 120 477-599 154-299 (332)
448 3ftd_A Dimethyladenosine trans 97.8 7.8E-05 2.7E-09 75.4 10.6 83 202-290 17-103 (249)
449 2pt6_A Spermidine synthase; tr 97.8 3.2E-05 1.1E-09 81.2 7.8 142 477-621 117-279 (321)
450 1o54_A SAM-dependent O-methylt 97.8 3.5E-05 1.2E-09 78.3 7.8 109 477-598 113-233 (277)
451 1sui_A Caffeoyl-COA O-methyltr 97.8 2.3E-05 7.8E-10 78.9 6.3 95 477-579 80-190 (247)
452 4df3_A Fibrillarin-like rRNA/T 97.8 2.7E-05 9.3E-10 78.3 6.8 94 475-579 76-182 (233)
453 1xj5_A Spermidine synthase 1; 97.8 2.4E-05 8E-10 82.7 6.4 101 476-578 120-234 (334)
454 2fpo_A Methylase YHHF; structu 97.8 1.3E-05 4.3E-10 77.9 3.9 99 477-581 55-162 (202)
455 1ixk_A Methyltransferase; open 97.8 2E-05 6.7E-10 82.4 5.6 120 476-597 118-268 (315)
456 2yxe_A Protein-L-isoaspartate 97.8 1.2E-05 4.2E-10 77.8 3.7 95 476-581 77-179 (215)
457 2b2c_A Spermidine synthase; be 97.7 3.4E-05 1.2E-09 80.8 7.2 140 477-619 109-269 (314)
458 2nyu_A Putative ribosomal RNA 97.7 5.5E-05 1.9E-09 71.9 8.0 137 477-618 23-186 (196)
459 3adn_A Spermidine synthase; am 97.7 7E-05 2.4E-09 77.6 9.4 143 476-620 83-246 (294)
460 3fzg_A 16S rRNA methylase; met 97.7 1.1E-05 3.9E-10 78.8 3.1 142 464-618 40-197 (200)
461 1dl5_A Protein-L-isoaspartate 97.7 9.4E-06 3.2E-10 84.5 2.4 95 476-580 75-176 (317)
462 3khk_A Type I restriction-modi 97.7 9.6E-05 3.3E-09 83.0 10.5 114 202-321 231-396 (544)
463 1wy7_A Hypothetical protein PH 97.7 0.00016 5.4E-09 69.5 10.7 117 476-600 49-171 (207)
464 3uwp_A Histone-lysine N-methyl 97.7 2E-05 6.7E-10 85.5 4.6 100 475-580 172-289 (438)
465 1fp1_D Isoliquiritigenin 2'-O- 97.7 1.3E-05 4.5E-10 85.1 3.3 97 475-579 208-306 (372)
466 1i9g_A Hypothetical protein RV 97.7 4.7E-05 1.6E-09 76.9 7.1 109 477-597 100-223 (280)
467 1m6e_X S-adenosyl-L-methionnin 97.7 2.1E-05 7.3E-10 83.8 4.5 103 218-321 51-210 (359)
468 2r6z_A UPF0341 protein in RSP 97.7 4.9E-05 1.7E-09 77.4 6.8 81 208-293 75-172 (258)
469 3reo_A (ISO)eugenol O-methyltr 97.7 3.6E-05 1.2E-09 81.9 6.1 97 475-579 202-300 (368)
470 1jg1_A PIMT;, protein-L-isoasp 97.7 1.2E-05 3.9E-10 79.7 1.9 92 476-580 91-190 (235)
471 3axs_A Probable N(2),N(2)-dime 97.7 0.00012 4.1E-09 79.0 9.9 93 220-320 54-158 (392)
472 2i7c_A Spermidine synthase; tr 97.6 0.00011 3.8E-09 75.5 9.1 142 476-619 78-239 (283)
473 3c3y_A Pfomt, O-methyltransfer 97.6 4.6E-05 1.6E-09 75.9 5.9 95 477-579 71-181 (237)
474 3c0k_A UPF0064 protein YCCW; P 97.6 4.9E-05 1.7E-09 81.7 6.4 121 477-599 221-365 (396)
475 3b3j_A Histone-arginine methyl 97.6 1.8E-05 6.3E-10 87.5 3.1 96 476-577 158-261 (480)
476 1ne2_A Hypothetical protein TA 97.6 9.7E-05 3.3E-09 70.8 7.8 111 476-595 51-162 (200)
477 3bzb_A Uncharacterized protein 97.6 4.1E-05 1.4E-09 78.4 5.4 96 477-577 80-203 (281)
478 4auk_A Ribosomal RNA large sub 97.6 0.0019 6.6E-08 68.9 18.2 119 219-356 212-333 (375)
479 3a27_A TYW2, uncharacterized p 97.6 3.4E-05 1.2E-09 78.7 4.4 113 477-599 120-246 (272)
480 3lkd_A Type I restriction-modi 97.6 0.0003 1E-08 79.0 12.3 117 202-321 203-359 (542)
481 1m6y_A S-adenosyl-methyltransf 97.6 6.6E-05 2.2E-09 78.2 6.5 82 204-290 14-106 (301)
482 1fp2_A Isoflavone O-methyltran 97.6 1.9E-05 6.4E-10 83.2 2.4 96 476-579 188-288 (352)
483 1u2z_A Histone-lysine N-methyl 97.6 3.5E-05 1.2E-09 84.2 4.5 100 475-580 241-360 (433)
484 4hc4_A Protein arginine N-meth 97.6 6E-05 2E-09 80.9 5.9 99 477-578 84-188 (376)
485 2o07_A Spermidine synthase; st 97.5 8.7E-05 3E-09 77.2 6.7 142 476-619 95-256 (304)
486 3tma_A Methyltransferase; thum 97.5 0.00012 3.9E-09 77.4 7.7 140 475-618 202-353 (354)
487 1qyr_A KSGA, high level kasuga 97.5 7.1E-05 2.4E-09 75.9 5.7 83 203-292 8-100 (252)
488 2pbf_A Protein-L-isoaspartate 97.5 3.9E-05 1.3E-09 75.1 3.6 93 477-580 81-194 (227)
489 2oyr_A UPF0341 protein YHIQ; a 97.5 5.8E-05 2E-09 77.0 4.9 103 207-314 77-194 (258)
490 1uir_A Polyamine aminopropyltr 97.5 7.5E-05 2.6E-09 77.9 5.9 141 477-620 78-243 (314)
491 3p9c_A Caffeic acid O-methyltr 97.5 6.5E-05 2.2E-09 79.9 5.4 97 475-579 200-298 (364)
492 1wxx_A TT1595, hypothetical pr 97.5 5.2E-05 1.8E-09 81.1 4.7 122 477-601 210-353 (382)
493 1af7_A Chemotaxis receptor met 97.5 4E-05 1.4E-09 78.8 3.6 120 450-579 86-252 (274)
494 3gjy_A Spermidine synthase; AP 97.5 0.00014 4.6E-09 76.4 7.2 142 477-621 90-249 (317)
495 1r18_A Protein-L-isoaspartate( 97.5 3.9E-05 1.3E-09 75.3 2.7 93 477-580 85-195 (227)
496 3gcz_A Polyprotein; flavivirus 97.5 7.9E-05 2.7E-09 76.5 5.0 114 202-321 76-202 (282)
497 2cmg_A Spermidine synthase; tr 97.5 0.00048 1.6E-08 70.1 10.8 130 476-620 72-217 (262)
498 4dmg_A Putative uncharacterize 97.4 9.5E-05 3.2E-09 79.8 5.6 122 477-601 215-354 (393)
499 3ajd_A Putative methyltransfer 97.4 5.8E-05 2E-09 76.9 3.6 99 477-578 84-210 (274)
500 2h00_A Methyltransferase 10 do 97.4 2.3E-05 7.8E-10 78.3 -0.4 101 476-577 65-190 (254)
No 1
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.56 E-value=1.8e-14 Score=139.49 Aligned_cols=135 Identities=12% Similarity=0.041 Sum_probs=106.2
Q ss_pred cEEEEeCCCCcHHHHHHhhcCCEEEEcCcCCchHHHHHHHHHcCCCeEEEEeccccCCCCCCCeeEEEecccccccc-cC
Q 006662 220 RTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALERGVPALIGVMASIRLPYPSRAFDMAHCSRCLIPWG-QY 298 (636)
Q Consensus 220 r~VLDIGCGtG~~a~~La~~~v~vv~i~p~Dis~a~l~~A~erg~~~~~~~~d~~~Lpf~~~sFDlV~~s~~L~h~~-~d 298 (636)
.+|||||||+|.++..|++++..++++ |+++.+++.++++...+.+..++...+++++++||+|++..+++|+. .+
T Consensus 43 ~~vLDiGcG~G~~~~~l~~~~~~v~gv---D~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~ 119 (203)
T 3h2b_A 43 GVILDVGSGTGRWTGHLASLGHQIEGL---EPATRLVELARQTHPSVTFHHGTITDLSDSPKRWAGLLAWYSLIHMGPGE 119 (203)
T ss_dssp SCEEEETCTTCHHHHHHHHTTCCEEEE---CCCHHHHHHHHHHCTTSEEECCCGGGGGGSCCCEEEEEEESSSTTCCTTT
T ss_pred CeEEEecCCCCHHHHHHHhcCCeEEEE---eCCHHHHHHHHHhCCCCeEEeCcccccccCCCCeEEEEehhhHhcCCHHH
Confidence 389999999999999999998777777 99999999999988889999999999999899999999999997775 35
Q ss_pred hHHHHHHHHhcccCCcEEEEEeCCCCccccccCCCCchhhhHHHHHHHHHHHHHhceEeec
Q 006662 299 DGLYLIEVDRVLRPGGYWILSGPPVNWESHWKGWNRTTEDLKSEQNGIETIARSLCWKKLI 359 (636)
Q Consensus 299 ~~~~L~el~RvLKPGG~Liis~p~~~w~~~~~~W~~t~e~l~~~~~~ie~la~~l~Wk~v~ 359 (636)
...+++++.++|||||++++..+.......... ..........+.+.++++..+|+.+.
T Consensus 120 ~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~Gf~~~~ 178 (203)
T 3h2b_A 120 LPDALVALRMAVEDGGGLLMSFFSGPSLEPMYH--PVATAYRWPLPELAQALETAGFQVTS 178 (203)
T ss_dssp HHHHHHHHHHTEEEEEEEEEEEECCSSCEEECC--SSSCEEECCHHHHHHHHHHTTEEEEE
T ss_pred HHHHHHHHHHHcCCCcEEEEEEccCCchhhhhc--hhhhhccCCHHHHHHHHHHCCCcEEE
Confidence 689999999999999999998753332111110 00011112245677888889998765
No 2
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.55 E-value=9.3e-15 Score=149.38 Aligned_cols=110 Identities=23% Similarity=0.267 Sum_probs=93.4
Q ss_pred HHHHHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhcCCEEEEcCcCCchHHHHHHHHHcCCCeEEEEeccccCCCCCC
Q 006662 202 DAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALERGVPALIGVMASIRLPYPSR 281 (636)
Q Consensus 202 ~~~id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~~v~vv~i~p~Dis~a~l~~A~erg~~~~~~~~d~~~Lpf~~~ 281 (636)
.+.++.|.+..+ ...+|||||||+|.++..|++++..++++ |+|+.|++.|++ ..++.+.+++.+.+|++++
T Consensus 27 ~~l~~~l~~~~~----~~~~vLDvGcGtG~~~~~l~~~~~~v~gv---D~s~~ml~~a~~-~~~v~~~~~~~e~~~~~~~ 98 (257)
T 4hg2_A 27 RALFRWLGEVAP----ARGDALDCGCGSGQASLGLAEFFERVHAV---DPGEAQIRQALR-HPRVTYAVAPAEDTGLPPA 98 (257)
T ss_dssp HHHHHHHHHHSS----CSSEEEEESCTTTTTHHHHHTTCSEEEEE---ESCHHHHHTCCC-CTTEEEEECCTTCCCCCSS
T ss_pred HHHHHHHHHhcC----CCCCEEEEcCCCCHHHHHHHHhCCEEEEE---eCcHHhhhhhhh-cCCceeehhhhhhhcccCC
Confidence 445566666543 22489999999999999999998888777 999999988854 4578999999999999999
Q ss_pred CeeEEEecccccccccChHHHHHHHHhcccCCcEEEEEeC
Q 006662 282 AFDMAHCSRCLIPWGQYDGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 282 sFDlV~~s~~L~h~~~d~~~~L~el~RvLKPGG~Liis~p 321 (636)
+||+|+|..++ ||. ++..++.++.|+|||||.|++...
T Consensus 99 sfD~v~~~~~~-h~~-~~~~~~~e~~rvLkpgG~l~~~~~ 136 (257)
T 4hg2_A 99 SVDVAIAAQAM-HWF-DLDRFWAELRRVARPGAVFAAVTY 136 (257)
T ss_dssp CEEEEEECSCC-TTC-CHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cccEEEEeeeh-hHh-hHHHHHHHHHHHcCCCCEEEEEEC
Confidence 99999999999 776 678999999999999999999864
No 3
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.53 E-value=3.4e-14 Score=140.94 Aligned_cols=157 Identities=17% Similarity=0.160 Sum_probs=114.2
Q ss_pred HHHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhcCCEEEEcCcCCchHHHHHHHHHc--CCCeEEEEeccccCCCCCC
Q 006662 204 YIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALER--GVPALIGVMASIRLPYPSR 281 (636)
Q Consensus 204 ~id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~~v~vv~i~p~Dis~a~l~~A~er--g~~~~~~~~d~~~Lpf~~~ 281 (636)
.++.+.+.++ ++. +|||||||+|.++..+++++..++++ |+++.+++.++++ ..++.+...|...++++++
T Consensus 43 ~~~~l~~~~~--~~~--~vLDiG~G~G~~~~~l~~~~~~v~~v---D~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~ 115 (242)
T 3l8d_A 43 IIPFFEQYVK--KEA--EVLDVGCGDGYGTYKLSRTGYKAVGV---DISEVMIQKGKERGEGPDLSFIKGDLSSLPFENE 115 (242)
T ss_dssp HHHHHHHHSC--TTC--EEEEETCTTSHHHHHHHHTTCEEEEE---ESCHHHHHHHHTTTCBTTEEEEECBTTBCSSCTT
T ss_pred HHHHHHHHcC--CCC--eEEEEcCCCCHHHHHHHHcCCeEEEE---ECCHHHHHHHHhhcccCCceEEEcchhcCCCCCC
Confidence 4445555442 333 89999999999999999998877777 9999999999877 3568899999999999999
Q ss_pred CeeEEEecccccccccChHHHHHHHHhcccCCcEEEEEeCCCCccccccCC----CCchhhhHHHHHHHHHHHHHhceEe
Q 006662 282 AFDMAHCSRCLIPWGQYDGLYLIEVDRVLRPGGYWILSGPPVNWESHWKGW----NRTTEDLKSEQNGIETIARSLCWKK 357 (636)
Q Consensus 282 sFDlV~~s~~L~h~~~d~~~~L~el~RvLKPGG~Liis~p~~~w~~~~~~W----~~t~e~l~~~~~~ie~la~~l~Wk~ 357 (636)
+||+|++..+++|+ +++..++.++.++|||||++++..+..........| .............++++++..+|+.
T Consensus 116 ~fD~v~~~~~l~~~-~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~ 194 (242)
T 3l8d_A 116 QFEAIMAINSLEWT-EEPLRALNEIKRVLKSDGYACIAILGPTAKPRENSYPRLYGKDVVCNTMMPWEFEQLVKEQGFKV 194 (242)
T ss_dssp CEEEEEEESCTTSS-SCHHHHHHHHHHHEEEEEEEEEEEECTTCGGGGGGGGGGGTCCCSSCCCCHHHHHHHHHHTTEEE
T ss_pred CccEEEEcChHhhc-cCHHHHHHHHHHHhCCCeEEEEEEcCCcchhhhhhhhhhccccccccCCCHHHHHHHHHHcCCEE
Confidence 99999999999666 588999999999999999999987432211110000 0000001122346788889999988
Q ss_pred ecccccEEEEeCCC
Q 006662 358 LIQKKDLAIWQKPT 371 (636)
Q Consensus 358 v~~~~~~aIWqKp~ 371 (636)
+.. ..+|..+.
T Consensus 195 ~~~---~~~~~~~~ 205 (242)
T 3l8d_A 195 VDG---IGVYKRGV 205 (242)
T ss_dssp EEE---EEEECTTC
T ss_pred EEe---ecccccCc
Confidence 754 33455443
No 4
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.52 E-value=1.9e-14 Score=141.07 Aligned_cols=107 Identities=13% Similarity=0.051 Sum_probs=86.4
Q ss_pred HHHhhccCCCCCcEEEEeCCCCcHHHHHHhhcCCEEEEcCcCCchHHHHHHHHHc-----------------CCCeEEEE
Q 006662 208 IGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALER-----------------GVPALIGV 270 (636)
Q Consensus 208 L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~~v~vv~i~p~Dis~a~l~~A~er-----------------g~~~~~~~ 270 (636)
+.+.+...++. +|||+|||+|.++.+|++++..++++ |+|+.|++.|+++ ..++.+.+
T Consensus 14 ~~~~l~~~~~~--~vLD~GCG~G~~~~~la~~g~~V~gv---D~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 88 (203)
T 1pjz_A 14 YWSSLNVVPGA--RVLVPLCGKSQDMSWLSGQGYHVVGA---ELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWC 88 (203)
T ss_dssp HHHHHCCCTTC--EEEETTTCCSHHHHHHHHHCCEEEEE---EECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEE
T ss_pred HHHhcccCCCC--EEEEeCCCCcHhHHHHHHCCCeEEEE---eCCHHHHHHHHHHccCCcccccccccccccCCccEEEE
Confidence 33334444444 99999999999999999998888888 9999999999865 24678999
Q ss_pred eccccCCCCC-CCeeEEEecccccccccCh-HHHHHHHHhcccCCcEEEEE
Q 006662 271 MASIRLPYPS-RAFDMAHCSRCLIPWGQYD-GLYLIEVDRVLRPGGYWILS 319 (636)
Q Consensus 271 ~d~~~Lpf~~-~sFDlV~~s~~L~h~~~d~-~~~L~el~RvLKPGG~Liis 319 (636)
+|...+++++ ++||+|++..+++++..+. ..+++++.|+|||||++++.
T Consensus 89 ~d~~~l~~~~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~ 139 (203)
T 1pjz_A 89 GDFFALTARDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLI 139 (203)
T ss_dssp ECCSSSTHHHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEE
T ss_pred CccccCCcccCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 9999998775 8999999988887665322 57999999999999984444
No 5
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.52 E-value=1.2e-13 Score=138.46 Aligned_cols=118 Identities=17% Similarity=0.263 Sum_probs=99.0
Q ss_pred ccHHHHHHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhc-CCEEEEcCcCCchHHHHHHHHHcC---CCeEEEEeccc
Q 006662 199 RGADAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR-NILAVSFAPRDTHEAQVQFALERG---VPALIGVMASI 274 (636)
Q Consensus 199 ~g~~~~id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~-~v~vv~i~p~Dis~a~l~~A~erg---~~~~~~~~d~~ 274 (636)
.+.....+.+.+.+...++. +|||||||+|.++..++++ +..++++ |+++.+++.++++. ..+.+...|..
T Consensus 38 ~~~~~~~~~~~~~~~~~~~~--~vLdiG~G~G~~~~~l~~~~~~~v~~v---D~s~~~~~~a~~~~~~~~~~~~~~~d~~ 112 (266)
T 3ujc_A 38 SGGLEATKKILSDIELNENS--KVLDIGSGLGGGCMYINEKYGAHTHGI---DICSNIVNMANERVSGNNKIIFEANDIL 112 (266)
T ss_dssp TTHHHHHHHHTTTCCCCTTC--EEEEETCTTSHHHHHHHHHHCCEEEEE---ESCHHHHHHHHHTCCSCTTEEEEECCTT
T ss_pred cchHHHHHHHHHhcCCCCCC--EEEEECCCCCHHHHHHHHHcCCEEEEE---eCCHHHHHHHHHHhhcCCCeEEEECccc
Confidence 33444556666666555554 9999999999999999997 7777777 99999999998875 46889999999
Q ss_pred cCCCCCCCeeEEEecccccccc-cChHHHHHHHHhcccCCcEEEEEeC
Q 006662 275 RLPYPSRAFDMAHCSRCLIPWG-QYDGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 275 ~Lpf~~~sFDlV~~s~~L~h~~-~d~~~~L~el~RvLKPGG~Liis~p 321 (636)
.+|+++++||+|++..+++|+. .++..+++++.|+|||||++++..+
T Consensus 113 ~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 160 (266)
T 3ujc_A 113 TKEFPENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDY 160 (266)
T ss_dssp TCCCCTTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cCCCCCCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 9999999999999999997763 4568999999999999999999875
No 6
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.52 E-value=9e-14 Score=137.45 Aligned_cols=136 Identities=14% Similarity=0.013 Sum_probs=102.4
Q ss_pred cEEEEeCCCCcHHHHHHhhcCCEEEEcCcCCchHHHHHHHHHcCC-CeEEEEeccccCCCCCCCeeEEEecccccccccC
Q 006662 220 RTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALERGV-PALIGVMASIRLPYPSRAFDMAHCSRCLIPWGQY 298 (636)
Q Consensus 220 r~VLDIGCGtG~~a~~La~~~v~vv~i~p~Dis~a~l~~A~erg~-~~~~~~~d~~~Lpf~~~sFDlV~~s~~L~h~~~d 298 (636)
.+|||||||+|.++..+++.+..++++ |+++.+++.|+++.. ++.+...+...+ +++++||+|++..+++|+ ++
T Consensus 44 ~~vLDiGcG~G~~~~~l~~~~~~v~gv---D~s~~~~~~a~~~~~~~v~~~~~d~~~~-~~~~~fD~v~~~~~l~~~-~~ 118 (250)
T 2p7i_A 44 GNLLELGSFKGDFTSRLQEHFNDITCV---EASEEAISHAQGRLKDGITYIHSRFEDA-QLPRRYDNIVLTHVLEHI-DD 118 (250)
T ss_dssp SCEEEESCTTSHHHHHHTTTCSCEEEE---ESCHHHHHHHHHHSCSCEEEEESCGGGC-CCSSCEEEEEEESCGGGC-SS
T ss_pred CcEEEECCCCCHHHHHHHHhCCcEEEE---eCCHHHHHHHHHhhhCCeEEEEccHHHc-CcCCcccEEEEhhHHHhh-cC
Confidence 379999999999999999987766677 899999999988765 688888888777 577899999999999766 48
Q ss_pred hHHHHHHHH-hcccCCcEEEEEeCCCCccc--------cccCCCC-chhh------hHHHHHHHHHHHHHhceEeecc
Q 006662 299 DGLYLIEVD-RVLRPGGYWILSGPPVNWES--------HWKGWNR-TTED------LKSEQNGIETIARSLCWKKLIQ 360 (636)
Q Consensus 299 ~~~~L~el~-RvLKPGG~Liis~p~~~w~~--------~~~~W~~-t~e~------l~~~~~~ie~la~~l~Wk~v~~ 360 (636)
+..+++++. |+|||||+++++.|...... ....|.. .... .....+.+.++++..+|+.+..
T Consensus 119 ~~~~l~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 196 (250)
T 2p7i_A 119 PVALLKRINDDWLAEGGRLFLVCPNANAVSRQIAVKMGIISHNSAVTEAEFAHGHRCTYALDTLERDASRAGLQVTYR 196 (250)
T ss_dssp HHHHHHHHHHTTEEEEEEEEEEEECTTCHHHHHHHHTTSSSSTTCCCHHHHHTTCCCCCCHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHhcCCCCEEEEEcCChHHHHHHHHHHcCccccchhcccccccccccccCCHHHHHHHHHHCCCeEEEE
Confidence 899999999 99999999999986443210 0000000 0000 0113456778888888987654
No 7
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.51 E-value=6.8e-14 Score=141.02 Aligned_cols=110 Identities=18% Similarity=0.258 Sum_probs=91.5
Q ss_pred HHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhcCCEEEEcCcCCchHHHHHHHHHc----C-CCeEEEEeccccCCCCC
Q 006662 206 DDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALER----G-VPALIGVMASIRLPYPS 280 (636)
Q Consensus 206 d~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~~v~vv~i~p~Dis~a~l~~A~er----g-~~~~~~~~d~~~Lpf~~ 280 (636)
+.+.+.+...++. +|||||||+|.++..+++++..++++ |+++.+++.|+++ + .++.+..+|...+|+++
T Consensus 27 ~~l~~~l~~~~~~--~vLDiGcG~G~~~~~l~~~~~~v~gv---D~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~~~~ 101 (260)
T 1vl5_A 27 AKLMQIAALKGNE--EVLDVATGGGHVANAFAPFVKKVVAF---DLTEDILKVARAFIEGNGHQQVEYVQGDAEQMPFTD 101 (260)
T ss_dssp HHHHHHHTCCSCC--EEEEETCTTCHHHHHHGGGSSEEEEE---ESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCCSCT
T ss_pred HHHHHHhCCCCCC--EEEEEeCCCCHHHHHHHHhCCEEEEE---eCCHHHHHHHHHHHHhcCCCceEEEEecHHhCCCCC
Confidence 3455555555444 99999999999999999987777777 8899999888754 3 35889999999999999
Q ss_pred CCeeEEEecccccccccChHHHHHHHHhcccCCcEEEEEeC
Q 006662 281 RAFDMAHCSRCLIPWGQYDGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 281 ~sFDlV~~s~~L~h~~~d~~~~L~el~RvLKPGG~Liis~p 321 (636)
++||+|+++.+++|+ +++..+|.++.|+|||||+|++..+
T Consensus 102 ~~fD~V~~~~~l~~~-~d~~~~l~~~~r~LkpgG~l~~~~~ 141 (260)
T 1vl5_A 102 ERFHIVTCRIAAHHF-PNPASFVSEAYRVLKKGGQLLLVDN 141 (260)
T ss_dssp TCEEEEEEESCGGGC-SCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCEEEEEEhhhhHhc-CCHHHHHHHHHHHcCCCCEEEEEEc
Confidence 999999999999665 5889999999999999999999754
No 8
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.51 E-value=1.6e-13 Score=134.22 Aligned_cols=154 Identities=17% Similarity=0.140 Sum_probs=112.2
Q ss_pred HHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhcC---CEEEEcCcCCchHHHHHHHHHc----CC-CeEEEEeccccCCC
Q 006662 207 DIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRN---ILAVSFAPRDTHEAQVQFALER----GV-PALIGVMASIRLPY 278 (636)
Q Consensus 207 ~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~~---v~vv~i~p~Dis~a~l~~A~er----g~-~~~~~~~d~~~Lpf 278 (636)
.+.+.+...++. +|||+|||+|.++..+++.+ ..++++ |+++.+++.++++ +. ++.+...|...+++
T Consensus 28 ~~~~~~~~~~~~--~vLDiG~G~G~~~~~l~~~~~~~~~v~~v---D~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~ 102 (219)
T 3dh0_A 28 KVLKEFGLKEGM--TVLDVGTGAGFYLPYLSKMVGEKGKVYAI---DVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPL 102 (219)
T ss_dssp HHHHHHTCCTTC--EEEESSCTTCTTHHHHHHHHTTTCEEEEE---ESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSS
T ss_pred HHHHHhCCCCCC--EEEEEecCCCHHHHHHHHHhCCCcEEEEE---ECCHHHHHHHHHHHHHcCCCcEEEEecccccCCC
Confidence 445555555554 99999999999999999875 566677 8899998888654 32 58899999999999
Q ss_pred CCCCeeEEEecccccccccChHHHHHHHHhcccCCcEEEEEeCCCCccccccCCCCchhhhHHHHHHHHHHHHHhceEee
Q 006662 279 PSRAFDMAHCSRCLIPWGQYDGLYLIEVDRVLRPGGYWILSGPPVNWESHWKGWNRTTEDLKSEQNGIETIARSLCWKKL 358 (636)
Q Consensus 279 ~~~sFDlV~~s~~L~h~~~d~~~~L~el~RvLKPGG~Liis~p~~~w~~~~~~W~~t~e~l~~~~~~ie~la~~l~Wk~v 358 (636)
++++||+|+++.+++|+ .++..+++++.++|||||++++..+....... ..........+.+.++++..+|+.+
T Consensus 103 ~~~~fD~v~~~~~l~~~-~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~~Gf~~~ 176 (219)
T 3dh0_A 103 PDNTVDFIFMAFTFHEL-SEPLKFLEELKRVAKPFAYLAIIDWKKEERDK-----GPPPEEVYSEWEVGLILEDAGIRVG 176 (219)
T ss_dssp CSSCEEEEEEESCGGGC-SSHHHHHHHHHHHEEEEEEEEEEEECSSCCSS-----SCCGGGSCCHHHHHHHHHHTTCEEE
T ss_pred CCCCeeEEEeehhhhhc-CCHHHHHHHHHHHhCCCeEEEEEEeccccccc-----CCchhcccCHHHHHHHHHHCCCEEE
Confidence 99999999999999666 58899999999999999999998642221111 0111111234567788889999876
Q ss_pred cccc-----cEEEEeCCC
Q 006662 359 IQKK-----DLAIWQKPT 371 (636)
Q Consensus 359 ~~~~-----~~aIWqKp~ 371 (636)
.... ...+.+|+.
T Consensus 177 ~~~~~~~~~~~~~~~k~~ 194 (219)
T 3dh0_A 177 RVVEVGKYCFGVYAMIVK 194 (219)
T ss_dssp EEEEETTTEEEEEEECC-
T ss_pred EEEeeCCceEEEEEEecc
Confidence 5321 245667764
No 9
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.50 E-value=1e-13 Score=142.40 Aligned_cols=116 Identities=15% Similarity=0.213 Sum_probs=96.4
Q ss_pred cHHHHHHHHHHhh----ccCCCCCcEEEEeCCCCcHHHHHHhhc-CCEEEEcCcCCchHHHHHHHHHc----C--CCeEE
Q 006662 200 GADAYIDDIGKLI----NLKDGSIRTAIDTGCGVASWGAYLMSR-NILAVSFAPRDTHEAQVQFALER----G--VPALI 268 (636)
Q Consensus 200 g~~~~id~L~~lL----~l~~g~~r~VLDIGCGtG~~a~~La~~-~v~vv~i~p~Dis~a~l~~A~er----g--~~~~~ 268 (636)
......+.+.+.+ ...++. +|||||||+|.++..+++. +..++++ |+++.+++.|+++ + ..+.+
T Consensus 62 ~~~~~~~~l~~~l~~~~~~~~~~--~vLDiGcG~G~~~~~l~~~~~~~v~gv---D~s~~~~~~a~~~~~~~~~~~~~~~ 136 (297)
T 2o57_A 62 ASLRTDEWLASELAMTGVLQRQA--KGLDLGAGYGGAARFLVRKFGVSIDCL---NIAPVQNKRNEEYNNQAGLADNITV 136 (297)
T ss_dssp HHHHHHHHHHHHHHHTTCCCTTC--EEEEETCTTSHHHHHHHHHHCCEEEEE---ESCHHHHHHHHHHHHHHTCTTTEEE
T ss_pred HHHHHHHHHHHHhhhccCCCCCC--EEEEeCCCCCHHHHHHHHHhCCEEEEE---eCCHHHHHHHHHHHHhcCCCcceEE
Confidence 3445556666666 444444 9999999999999999987 7777777 8899999888754 3 35889
Q ss_pred EEeccccCCCCCCCeeEEEecccccccccChHHHHHHHHhcccCCcEEEEEeC
Q 006662 269 GVMASIRLPYPSRAFDMAHCSRCLIPWGQYDGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 269 ~~~d~~~Lpf~~~sFDlV~~s~~L~h~~~d~~~~L~el~RvLKPGG~Liis~p 321 (636)
..+|...+|+++++||+|++..+++|+. ++..+++++.|+|||||++++..+
T Consensus 137 ~~~d~~~~~~~~~~fD~v~~~~~l~~~~-~~~~~l~~~~~~LkpgG~l~~~~~ 188 (297)
T 2o57_A 137 KYGSFLEIPCEDNSYDFIWSQDAFLHSP-DKLKVFQECARVLKPRGVMAITDP 188 (297)
T ss_dssp EECCTTSCSSCTTCEEEEEEESCGGGCS-CHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEcCcccCCCCCCCEeEEEecchhhhcC-CHHHHHHHHHHHcCCCeEEEEEEe
Confidence 9999999999999999999999997775 689999999999999999999875
No 10
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.49 E-value=4.7e-14 Score=140.71 Aligned_cols=150 Identities=13% Similarity=0.157 Sum_probs=106.5
Q ss_pred HHHHHHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhcCCEEEEcCcCCchHHHHHHHHHcCCCeEEEEeccccC--CC
Q 006662 201 ADAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALERGVPALIGVMASIRL--PY 278 (636)
Q Consensus 201 ~~~~id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~~v~vv~i~p~Dis~a~l~~A~erg~~~~~~~~d~~~L--pf 278 (636)
.+...+.+.+.++... ...+|||||||+|.++..+++.+..++++ |+++.+++.++++ +.+...+.... ++
T Consensus 25 ~~~~~~~~~~~l~~~~-~~~~vLDiGcG~G~~~~~l~~~~~~v~gv---D~s~~~~~~a~~~---~~~~~~d~~~~~~~~ 97 (240)
T 3dli_A 25 RELVKARLRRYIPYFK-GCRRVLDIGCGRGEFLELCKEEGIESIGV---DINEDMIKFCEGK---FNVVKSDAIEYLKSL 97 (240)
T ss_dssp HHHHHHHHGGGGGGTT-TCSCEEEETCTTTHHHHHHHHHTCCEEEE---CSCHHHHHHHHTT---SEEECSCHHHHHHTS
T ss_pred HHHHHHHHHHHHhhhc-CCCeEEEEeCCCCHHHHHHHhCCCcEEEE---ECCHHHHHHHHhh---cceeeccHHHHhhhc
Confidence 4555556666655322 23489999999999999999988777777 9999999999877 67777777664 78
Q ss_pred CCCCeeEEEecccccccccCh--HHHHHHHHhcccCCcEEEEEeCCCCcccccc-CCCCchhhhHHHHHHHHHHHHHhce
Q 006662 279 PSRAFDMAHCSRCLIPWGQYD--GLYLIEVDRVLRPGGYWILSGPPVNWESHWK-GWNRTTEDLKSEQNGIETIARSLCW 355 (636)
Q Consensus 279 ~~~sFDlV~~s~~L~h~~~d~--~~~L~el~RvLKPGG~Liis~p~~~w~~~~~-~W~~t~e~l~~~~~~ie~la~~l~W 355 (636)
++++||+|++..+++|+. ++ ..+++++.++|||||++++..+......... .|...........+.+.++++..+|
T Consensus 98 ~~~~fD~i~~~~~l~~~~-~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf 176 (240)
T 3dli_A 98 PDKYLDGVMISHFVEHLD-PERLFELLSLCYSKMKYSSYIVIESPNPTSLYSLINFYIDPTHKKPVHPETLKFILEYLGF 176 (240)
T ss_dssp CTTCBSEEEEESCGGGSC-GGGHHHHHHHHHHHBCTTCCEEEEEECTTSHHHHHHHTTSTTCCSCCCHHHHHHHHHHHTC
T ss_pred CCCCeeEEEECCchhhCC-cHHHHHHHHHHHHHcCCCcEEEEEeCCcchhHHHHHHhcCccccccCCHHHHHHHHHHCCC
Confidence 899999999999997765 44 8999999999999999999976433210000 0101111111123557778888888
Q ss_pred Eee
Q 006662 356 KKL 358 (636)
Q Consensus 356 k~v 358 (636)
+.+
T Consensus 177 ~~~ 179 (240)
T 3dli_A 177 RDV 179 (240)
T ss_dssp EEE
T ss_pred eEE
Confidence 754
No 11
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.49 E-value=1.1e-13 Score=138.75 Aligned_cols=109 Identities=17% Similarity=0.151 Sum_probs=92.7
Q ss_pred HHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhcCC-EEEEcCcCCchHHHHHHHHHcC--CCeEEEEeccccCCCCCCCe
Q 006662 207 DIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNI-LAVSFAPRDTHEAQVQFALERG--VPALIGVMASIRLPYPSRAF 283 (636)
Q Consensus 207 ~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~~v-~vv~i~p~Dis~a~l~~A~erg--~~~~~~~~d~~~Lpf~~~sF 283 (636)
.+.+.++..++ .+|||||||+|.++..+++.+. .++++ |+++.+++.++++. ..+.+..+|...+++++++|
T Consensus 35 ~l~~~~~~~~~--~~vLD~GcG~G~~~~~l~~~~~~~v~~v---D~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~f 109 (253)
T 3g5l_A 35 ELKKMLPDFNQ--KTVLDLGCGFGWHCIYAAEHGAKKVLGI---DLSERMLTEAKRKTTSPVVCYEQKAIEDIAIEPDAY 109 (253)
T ss_dssp HHHTTCCCCTT--CEEEEETCTTCHHHHHHHHTTCSEEEEE---ESCHHHHHHHHHHCCCTTEEEEECCGGGCCCCTTCE
T ss_pred HHHHhhhccCC--CEEEEECCCCCHHHHHHHHcCCCEEEEE---ECCHHHHHHHHHhhccCCeEEEEcchhhCCCCCCCe
Confidence 44555543333 4999999999999999999976 67777 99999999998774 46889999999999999999
Q ss_pred eEEEecccccccccChHHHHHHHHhcccCCcEEEEEeC
Q 006662 284 DMAHCSRCLIPWGQYDGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 284 DlV~~s~~L~h~~~d~~~~L~el~RvLKPGG~Liis~p 321 (636)
|+|++..+++|+ .++..+++++.++|||||+++++.+
T Consensus 110 D~v~~~~~l~~~-~~~~~~l~~~~~~LkpgG~l~~~~~ 146 (253)
T 3g5l_A 110 NVVLSSLALHYI-ASFDDICKKVYINLKSSGSFIFSVE 146 (253)
T ss_dssp EEEEEESCGGGC-SCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEEEchhhhhh-hhHHHHHHHHHHHcCCCcEEEEEeC
Confidence 999999999666 6889999999999999999999854
No 12
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.49 E-value=1.4e-13 Score=137.84 Aligned_cols=114 Identities=18% Similarity=0.223 Sum_probs=94.7
Q ss_pred HHHHHHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhc-CCEEEEcCcCCchHHHHHHHHHc----CC--CeEEEEecc
Q 006662 201 ADAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR-NILAVSFAPRDTHEAQVQFALER----GV--PALIGVMAS 273 (636)
Q Consensus 201 ~~~~id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~-~v~vv~i~p~Dis~a~l~~A~er----g~--~~~~~~~d~ 273 (636)
....++.+.+.+...++. +|||||||+|.++..+++. +..++++ |+++.+++.|+++ +. ++.+..+|.
T Consensus 21 ~~~~~~~l~~~~~~~~~~--~VLDiGcG~G~~~~~la~~~~~~v~gv---D~s~~~l~~a~~~~~~~~~~~~v~~~~~d~ 95 (256)
T 1nkv_A 21 TEEKYATLGRVLRMKPGT--RILDLGSGSGEMLCTWARDHGITGTGI---DMSSLFTAQAKRRAEELGVSERVHFIHNDA 95 (256)
T ss_dssp CHHHHHHHHHHTCCCTTC--EEEEETCTTCHHHHHHHHHTCCEEEEE---ESCHHHHHHHHHHHHHTTCTTTEEEEESCC
T ss_pred CHHHHHHHHHhcCCCCCC--EEEEECCCCCHHHHHHHHhcCCeEEEE---eCCHHHHHHHHHHHHhcCCCcceEEEECCh
Confidence 355667777777666555 9999999999999999987 6667777 8899998888654 33 488999999
Q ss_pred ccCCCCCCCeeEEEecccccccccChHHHHHHHHhcccCCcEEEEEeC
Q 006662 274 IRLPYPSRAFDMAHCSRCLIPWGQYDGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 274 ~~Lpf~~~sFDlV~~s~~L~h~~~d~~~~L~el~RvLKPGG~Liis~p 321 (636)
..+++ +++||+|+|..+++|+. ++..+++++.|+|||||++++..+
T Consensus 96 ~~~~~-~~~fD~V~~~~~~~~~~-~~~~~l~~~~r~LkpgG~l~~~~~ 141 (256)
T 1nkv_A 96 AGYVA-NEKCDVAACVGATWIAG-GFAGAEELLAQSLKPGGIMLIGEP 141 (256)
T ss_dssp TTCCC-SSCEEEEEEESCGGGTS-SSHHHHHHHTTSEEEEEEEEEEEE
T ss_pred HhCCc-CCCCCEEEECCChHhcC-CHHHHHHHHHHHcCCCeEEEEecC
Confidence 88887 78999999999996654 789999999999999999999865
No 13
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.49 E-value=4.2e-13 Score=130.17 Aligned_cols=152 Identities=15% Similarity=0.169 Sum_probs=108.6
Q ss_pred HHHHHHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhc-CCEEEEcCcCCchHHHHHHHHHc----C--CCeEEEEecc
Q 006662 201 ADAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR-NILAVSFAPRDTHEAQVQFALER----G--VPALIGVMAS 273 (636)
Q Consensus 201 ~~~~id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~-~v~vv~i~p~Dis~a~l~~A~er----g--~~~~~~~~d~ 273 (636)
.....+.+.+.+...+ .+|||||||+|.++..++++ +..++++ |+++.+++.|+++ + ..+.+...|.
T Consensus 29 ~~~~~~~~~~~~~~~~---~~vLdiG~G~G~~~~~l~~~~~~~v~~~---D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~ 102 (219)
T 3dlc_A 29 YPIIAENIINRFGITA---GTCIDIGSGPGALSIALAKQSDFSIRAL---DFSKHMNEIALKNIADANLNDRIQIVQGDV 102 (219)
T ss_dssp HHHHHHHHHHHHCCCE---EEEEEETCTTSHHHHHHHHHSEEEEEEE---ESCHHHHHHHHHHHHHTTCTTTEEEEECBT
T ss_pred cHHHHHHHHHhcCCCC---CEEEEECCCCCHHHHHHHHcCCCeEEEE---ECCHHHHHHHHHHHHhccccCceEEEEcCH
Confidence 3445556666654332 28999999999999999987 5455555 8899999888765 3 3588999999
Q ss_pred ccCCCCCCCeeEEEecccccccccChHHHHHHHHhcccCCcEEEEEeCCCCccc----------cccCCCCch--hhhHH
Q 006662 274 IRLPYPSRAFDMAHCSRCLIPWGQYDGLYLIEVDRVLRPGGYWILSGPPVNWES----------HWKGWNRTT--EDLKS 341 (636)
Q Consensus 274 ~~Lpf~~~sFDlV~~s~~L~h~~~d~~~~L~el~RvLKPGG~Liis~p~~~w~~----------~~~~W~~t~--e~l~~ 341 (636)
..+++++++||+|+++.+++|+ .++..+++++.++|||||++++..+...... ....|.... .....
T Consensus 103 ~~~~~~~~~~D~v~~~~~l~~~-~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (219)
T 3dlc_A 103 HNIPIEDNYADLIVSRGSVFFW-EDVATAFREIYRILKSGGKTYIGGGFGNKELRDSISAEMIRKNPDWKEFNRKNISQE 181 (219)
T ss_dssp TBCSSCTTCEEEEEEESCGGGC-SCHHHHHHHHHHHEEEEEEEEEEECCSSHHHHHHHHHHHHHHCTTHHHHHHHHSSHH
T ss_pred HHCCCCcccccEEEECchHhhc-cCHHHHHHHHHHhCCCCCEEEEEeccCcHHHHHHHHHHHHHhHHHHHhhhhhccccC
Confidence 9999999999999999999666 6889999999999999999999864222100 000111100 00111
Q ss_pred HHHHHHHHHHHhceEeec
Q 006662 342 EQNGIETIARSLCWKKLI 359 (636)
Q Consensus 342 ~~~~ie~la~~l~Wk~v~ 359 (636)
..+.+.++++..+|+.+.
T Consensus 182 ~~~~~~~~l~~aGf~~v~ 199 (219)
T 3dlc_A 182 NVERFQNVLDEIGISSYE 199 (219)
T ss_dssp HHHHHHHHHHHHTCSSEE
T ss_pred CHHHHHHHHHHcCCCeEE
Confidence 336678888888887553
No 14
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.49 E-value=8.6e-14 Score=139.04 Aligned_cols=150 Identities=9% Similarity=0.057 Sum_probs=105.7
Q ss_pred HHHHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhcC-CEEEEcCcCCchHHHHHHHHHcC---CCeEEEEeccccCCC
Q 006662 203 AYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRN-ILAVSFAPRDTHEAQVQFALERG---VPALIGVMASIRLPY 278 (636)
Q Consensus 203 ~~id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~~-v~vv~i~p~Dis~a~l~~A~erg---~~~~~~~~d~~~Lpf 278 (636)
..+..+.+.+...+ ..+|||||||+|.++..+++++ ..++.+ |+++.+++.++++. ..+.+...+...+++
T Consensus 80 ~~~~~~l~~l~~~~--~~~vLDiG~G~G~~~~~l~~~~~~~v~~v---D~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~ 154 (254)
T 1xtp_A 80 EGSRNFIASLPGHG--TSRALDCGAGIGRITKNLLTKLYATTDLL---EPVKHMLEEAKRELAGMPVGKFILASMETATL 154 (254)
T ss_dssp HHHHHHHHTSTTCC--CSEEEEETCTTTHHHHHTHHHHCSEEEEE---ESCHHHHHHHHHHTTTSSEEEEEESCGGGCCC
T ss_pred HHHHHHHHhhcccC--CCEEEEECCCcCHHHHHHHHhhcCEEEEE---eCCHHHHHHHHHHhccCCceEEEEccHHHCCC
Confidence 34444555544333 3499999999999999998874 345555 88999999998775 357888889988999
Q ss_pred CCCCeeEEEeccccccccc-ChHHHHHHHHhcccCCcEEEEEeCCCCccccccCCCCchhhhHHHHHHHHHHHHHhceEe
Q 006662 279 PSRAFDMAHCSRCLIPWGQ-YDGLYLIEVDRVLRPGGYWILSGPPVNWESHWKGWNRTTEDLKSEQNGIETIARSLCWKK 357 (636)
Q Consensus 279 ~~~sFDlV~~s~~L~h~~~-d~~~~L~el~RvLKPGG~Liis~p~~~w~~~~~~W~~t~e~l~~~~~~ie~la~~l~Wk~ 357 (636)
++++||+|++..+++|+.. +...+++++.++|||||++++..+.......... ..........+.+.++++..+|+.
T Consensus 155 ~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~aGf~~ 232 (254)
T 1xtp_A 155 PPNTYDLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKENCSTGDRFLVD--KEDSSLTRSDIHYKRLFNESGVRV 232 (254)
T ss_dssp CSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC--CCEEEE--TTTTEEEBCHHHHHHHHHHHTCCE
T ss_pred CCCCeEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCcccceec--ccCCcccCCHHHHHHHHHHCCCEE
Confidence 8899999999999977753 4589999999999999999998742211110000 000111123455777888888876
Q ss_pred ec
Q 006662 358 LI 359 (636)
Q Consensus 358 v~ 359 (636)
+.
T Consensus 233 ~~ 234 (254)
T 1xtp_A 233 VK 234 (254)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 15
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.49 E-value=3.4e-13 Score=132.24 Aligned_cols=161 Identities=11% Similarity=0.114 Sum_probs=111.3
Q ss_pred HHHHHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhcC--CEEEEcCcCCchHHHHHHHHHcCC----------CeEEE
Q 006662 202 DAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRN--ILAVSFAPRDTHEAQVQFALERGV----------PALIG 269 (636)
Q Consensus 202 ~~~id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~~--v~vv~i~p~Dis~a~l~~A~erg~----------~~~~~ 269 (636)
....+.+.+.+...++. +|||||||+|.++..+++++ ..++++ |+++.+++.|+++.. .+.+.
T Consensus 15 ~~~~~~l~~~l~~~~~~--~vLDiGcG~G~~~~~l~~~~~~~~v~gv---D~s~~~~~~a~~~~~~~~~~~~~~~~v~~~ 89 (219)
T 3jwg_A 15 QQRLGTVVAVLKSVNAK--KVIDLGCGEGNLLSLLLKDKSFEQITGV---DVSYSVLERAKDRLKIDRLPEMQRKRISLF 89 (219)
T ss_dssp HHHHHHHHHHHHHTTCC--EEEEETCTTCHHHHHHHTSTTCCEEEEE---ESCHHHHHHHHHHHTGGGSCHHHHTTEEEE
T ss_pred HHHHHHHHHHHhhcCCC--EEEEecCCCCHHHHHHHhcCCCCEEEEE---ECCHHHHHHHHHHHHhhccccccCcceEEE
Confidence 44455666666544444 99999999999999999875 566677 889999999876521 67888
Q ss_pred EeccccCCCCCCCeeEEEecccccccccCh--HHHHHHHHhcccCCcEEEEEeCCCCccccccC------------CCCc
Q 006662 270 VMASIRLPYPSRAFDMAHCSRCLIPWGQYD--GLYLIEVDRVLRPGGYWILSGPPVNWESHWKG------------WNRT 335 (636)
Q Consensus 270 ~~d~~~Lpf~~~sFDlV~~s~~L~h~~~d~--~~~L~el~RvLKPGG~Liis~p~~~w~~~~~~------------W~~t 335 (636)
..|...+++++++||+|+|..+++|+. ++ ..+++++.++|||||+++.... ..+...+.. +.-+
T Consensus 90 ~~d~~~~~~~~~~fD~V~~~~~l~~~~-~~~~~~~l~~~~~~LkpgG~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (219)
T 3jwg_A 90 QSSLVYRDKRFSGYDAATVIEVIEHLD-ENRLQAFEKVLFEFTRPQTVIVSTPN-KEYNFHYGNLFEGNLRHRDHRFEWT 167 (219)
T ss_dssp ECCSSSCCGGGTTCSEEEEESCGGGCC-HHHHHHHHHHHHTTTCCSEEEEEEEB-GGGGGCCCCT-----GGGCCTTSBC
T ss_pred eCcccccccccCCCCEEEEHHHHHhCC-HHHHHHHHHHHHHhhCCCEEEEEccc-hhhhhhhcccCcccccccCceeeec
Confidence 888888888788999999999997774 44 6899999999999996655432 222111100 0012
Q ss_pred hhhhHHHHHHHHHHHHHhceEeecc-----------cccEEEEeCCCC
Q 006662 336 TEDLKSEQNGIETIARSLCWKKLIQ-----------KKDLAIWQKPTN 372 (636)
Q Consensus 336 ~e~l~~~~~~ie~la~~l~Wk~v~~-----------~~~~aIWqKp~~ 372 (636)
.++ ..+.++++++..+|+.... ..+++|+.|-..
T Consensus 168 ~~~---l~~~~~~l~~~~Gf~v~~~~~g~~~~~~g~~~qi~~~~~~~~ 212 (219)
T 3jwg_A 168 RKE---FQTWAVKVAEKYGYSVRFLQIGEIDDEFGSPTQMGVFTLGAG 212 (219)
T ss_dssp HHH---HHHHHHHHHHHHTEEEEEEEESCCCTTSCCSEEEEEEEECC-
T ss_pred HHH---HHHHHHHHHHHCCcEEEEEecCCccccCCCCeEEEEEeccCC
Confidence 222 2233557888889976532 223678877653
No 16
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.49 E-value=1.4e-13 Score=134.76 Aligned_cols=107 Identities=13% Similarity=0.102 Sum_probs=90.0
Q ss_pred HHHhhccCCCCCcEEEEeCCCCcHHHHHHhhcCCEEEEcCcCCchHHHHHHHHHcCC-CeEEEEeccccCCCCCCCeeEE
Q 006662 208 IGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALERGV-PALIGVMASIRLPYPSRAFDMA 286 (636)
Q Consensus 208 L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~~v~vv~i~p~Dis~a~l~~A~erg~-~~~~~~~d~~~Lpf~~~sFDlV 286 (636)
+.+.+...++. +|||||||+|.++..+++++..++++ |+++.+++.++++.. .+.+..+|...++++ ++||+|
T Consensus 37 ~l~~~~~~~~~--~vLDiGcG~G~~~~~l~~~~~~v~~v---D~s~~~~~~a~~~~~~~~~~~~~d~~~~~~~-~~fD~v 110 (220)
T 3hnr_A 37 ILEDVVNKSFG--NVLEFGVGTGNLTNKLLLAGRTVYGI---EPSREMRMIAKEKLPKEFSITEGDFLSFEVP-TSIDTI 110 (220)
T ss_dssp HHHHHHHTCCS--EEEEECCTTSHHHHHHHHTTCEEEEE---CSCHHHHHHHHHHSCTTCCEESCCSSSCCCC-SCCSEE
T ss_pred HHHHhhccCCC--eEEEeCCCCCHHHHHHHhCCCeEEEE---eCCHHHHHHHHHhCCCceEEEeCChhhcCCC-CCeEEE
Confidence 33344334444 89999999999999999998877777 999999999988765 678888899999888 999999
Q ss_pred EecccccccccChHH--HHHHHHhcccCCcEEEEEeC
Q 006662 287 HCSRCLIPWGQYDGL--YLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 287 ~~s~~L~h~~~d~~~--~L~el~RvLKPGG~Liis~p 321 (636)
++..+++|+. ++.. +++++.++|||||++++..+
T Consensus 111 ~~~~~l~~~~-~~~~~~~l~~~~~~LkpgG~l~i~~~ 146 (220)
T 3hnr_A 111 VSTYAFHHLT-DDEKNVAIAKYSQLLNKGGKIVFADT 146 (220)
T ss_dssp EEESCGGGSC-HHHHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred EECcchhcCC-hHHHHHHHHHHHHhcCCCCEEEEEec
Confidence 9999996664 5555 99999999999999999975
No 17
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.47 E-value=2.1e-13 Score=128.32 Aligned_cols=134 Identities=13% Similarity=0.074 Sum_probs=99.3
Q ss_pred HhhccCCCCCcEEEEeCCCCcHHHHHHhhcCCEEEEcCcCCchHHHHHHHHHcCCCeEEEEeccccCCCCCCCeeEEEec
Q 006662 210 KLINLKDGSIRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALERGVPALIGVMASIRLPYPSRAFDMAHCS 289 (636)
Q Consensus 210 ~lL~l~~g~~r~VLDIGCGtG~~a~~La~~~v~vv~i~p~Dis~a~l~~A~erg~~~~~~~~d~~~Lpf~~~sFDlV~~s 289 (636)
+.+...++. +|||+|||+|.++..+++.+..++++ |+++.+++.++++...+.+...+ +++++++||+|+++
T Consensus 11 ~~~~~~~~~--~vLDiG~G~G~~~~~l~~~~~~v~~v---D~s~~~~~~a~~~~~~v~~~~~d---~~~~~~~~D~v~~~ 82 (170)
T 3i9f_A 11 PNIFEGKKG--VIVDYGCGNGFYCKYLLEFATKLYCI---DINVIALKEVKEKFDSVITLSDP---KEIPDNSVDFILFA 82 (170)
T ss_dssp HHHHSSCCE--EEEEETCTTCTTHHHHHTTEEEEEEE---CSCHHHHHHHHHHCTTSEEESSG---GGSCTTCEEEEEEE
T ss_pred HhcCcCCCC--eEEEECCCCCHHHHHHHhhcCeEEEE---eCCHHHHHHHHHhCCCcEEEeCC---CCCCCCceEEEEEc
Confidence 334444444 89999999999999999986455566 99999999998886678888777 77888999999999
Q ss_pred ccccccccChHHHHHHHHhcccCCcEEEEEeCCCCccccccCCCCchhhhHHHHHHHHHHHHHhceEeec
Q 006662 290 RCLIPWGQYDGLYLIEVDRVLRPGGYWILSGPPVNWESHWKGWNRTTEDLKSEQNGIETIARSLCWKKLI 359 (636)
Q Consensus 290 ~~L~h~~~d~~~~L~el~RvLKPGG~Liis~p~~~w~~~~~~W~~t~e~l~~~~~~ie~la~~l~Wk~v~ 359 (636)
.+++|+ +++..+++++.++|||||++++..+........ .. .......+++.++++ +|+.+.
T Consensus 83 ~~l~~~-~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~l~--Gf~~~~ 144 (170)
T 3i9f_A 83 NSFHDM-DDKQHVISEVKRILKDDGRVIIIDWRKENTGIG----PP-LSIRMDEKDYMGWFS--NFVVEK 144 (170)
T ss_dssp SCSTTC-SCHHHHHHHHHHHEEEEEEEEEEEECSSCCSSS----SC-GGGCCCHHHHHHHTT--TEEEEE
T ss_pred cchhcc-cCHHHHHHHHHHhcCCCCEEEEEEcCccccccC----ch-HhhhcCHHHHHHHHh--CcEEEE
Confidence 999666 588999999999999999999986532211111 11 111122345666666 887765
No 18
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.46 E-value=5.2e-13 Score=132.53 Aligned_cols=129 Identities=16% Similarity=0.119 Sum_probs=99.2
Q ss_pred cEEEEeCCCCcHHHHHHhhcCCEEEEcCcCCchHHHHHHHHHcCC------CeEEEEeccccCCCCCCCeeEEEeccccc
Q 006662 220 RTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALERGV------PALIGVMASIRLPYPSRAFDMAHCSRCLI 293 (636)
Q Consensus 220 r~VLDIGCGtG~~a~~La~~~v~vv~i~p~Dis~a~l~~A~erg~------~~~~~~~d~~~Lpf~~~sFDlV~~s~~L~ 293 (636)
.+|||||||+|.++..|++.+..++++ |+++.+++.|+++.. .+.+..+|...++ ++++||+|+++.+++
T Consensus 68 ~~vLDiGcG~G~~~~~l~~~~~~v~gv---D~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~fD~v~~~~~l~ 143 (235)
T 3lcc_A 68 GRALVPGCGGGHDVVAMASPERFVVGL---DISESALAKANETYGSSPKAEYFSFVKEDVFTWR-PTELFDLIFDYVFFC 143 (235)
T ss_dssp EEEEEETCTTCHHHHHHCBTTEEEEEE---CSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCC-CSSCEEEEEEESSTT
T ss_pred CCEEEeCCCCCHHHHHHHhCCCeEEEE---ECCHHHHHHHHHHhhccCCCcceEEEECchhcCC-CCCCeeEEEEChhhh
Confidence 489999999999999999988777777 999999999987643 3788888888876 456999999999996
Q ss_pred cccc-ChHHHHHHHHhcccCCcEEEEEeCCCCccccccCCCCchhhhHHHHHHHHHHHHHhceEeec
Q 006662 294 PWGQ-YDGLYLIEVDRVLRPGGYWILSGPPVNWESHWKGWNRTTEDLKSEQNGIETIARSLCWKKLI 359 (636)
Q Consensus 294 h~~~-d~~~~L~el~RvLKPGG~Liis~p~~~w~~~~~~W~~t~e~l~~~~~~ie~la~~l~Wk~v~ 359 (636)
++.. +...++.++.++|||||++++...+.........|.. ..+.+.++++..+|+.+.
T Consensus 144 ~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~~Gf~~~~ 203 (235)
T 3lcc_A 144 AIEPEMRPAWAKSMYELLKPDGELITLMYPITDHVGGPPYKV-------DVSTFEEVLVPIGFKAVS 203 (235)
T ss_dssp TSCGGGHHHHHHHHHHHEEEEEEEEEEECCCSCCCSCSSCCC-------CHHHHHHHHGGGTEEEEE
T ss_pred cCCHHHHHHHHHHHHHHCCCCcEEEEEEecccccCCCCCccC-------CHHHHHHHHHHcCCeEEE
Confidence 6643 4488999999999999999998764432221112222 234577788888887654
No 19
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.46 E-value=2.7e-13 Score=138.67 Aligned_cols=100 Identities=17% Similarity=0.175 Sum_probs=82.1
Q ss_pred CCCCCcEEEEeCCCCcHHHHHHhhc----CCEEEEcCcCCchHHHHHHHHHc----C--CCeEEEEeccccCCCCCCCee
Q 006662 215 KDGSIRTAIDTGCGVASWGAYLMSR----NILAVSFAPRDTHEAQVQFALER----G--VPALIGVMASIRLPYPSRAFD 284 (636)
Q Consensus 215 ~~g~~r~VLDIGCGtG~~a~~La~~----~v~vv~i~p~Dis~a~l~~A~er----g--~~~~~~~~d~~~Lpf~~~sFD 284 (636)
.++. +|||||||+|.++..|+++ +..++++ |+|+.|++.|+++ + .++.+..+|...+|++ .||
T Consensus 69 ~~~~--~vLDlGcGtG~~~~~la~~~~~~~~~v~gv---D~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~~--~~d 141 (261)
T 4gek_A 69 QPGT--QVYDLGCSLGAATLSVRRNIHHDNCKIIAI---DNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAIE--NAS 141 (261)
T ss_dssp CTTC--EEEEETCTTTHHHHHHHHTCCSSSCEEEEE---ESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCCC--SEE
T ss_pred CCCC--EEEEEeCCCCHHHHHHHHhcCCCCCEEEEE---ECCHHHHHHHHHHHHhhccCceEEEeeccccccccc--ccc
Confidence 4454 9999999999999999876 5567777 9999999999865 2 3578899998888775 599
Q ss_pred EEEecccccccccCh-HHHHHHHHhcccCCcEEEEEeC
Q 006662 285 MAHCSRCLIPWGQYD-GLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 285 lV~~s~~L~h~~~d~-~~~L~el~RvLKPGG~Liis~p 321 (636)
+|+++.+++++.+.. ..+|++++|+|||||.|+++.+
T Consensus 142 ~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~ 179 (261)
T 4gek_A 142 MVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEK 179 (261)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEec
Confidence 999999996554222 5789999999999999999864
No 20
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.45 E-value=4.6e-13 Score=135.52 Aligned_cols=116 Identities=25% Similarity=0.434 Sum_probs=95.9
Q ss_pred cHHHHHHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhc-CCEEEEcCcCCchHHHHHHHHHc----CC--CeEEEEec
Q 006662 200 GADAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR-NILAVSFAPRDTHEAQVQFALER----GV--PALIGVMA 272 (636)
Q Consensus 200 g~~~~id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~-~v~vv~i~p~Dis~a~l~~A~er----g~--~~~~~~~d 272 (636)
......+.+.+.++..++. +|||||||+|.++..++++ +..++++ |+++.+++.++++ +. .+.+...|
T Consensus 45 ~~~~~~~~l~~~~~~~~~~--~vLDiGcG~G~~~~~l~~~~~~~v~gv---D~s~~~~~~a~~~~~~~~~~~~~~~~~~d 119 (273)
T 3bus_A 45 ATDRLTDEMIALLDVRSGD--RVLDVGCGIGKPAVRLATARDVRVTGI---SISRPQVNQANARATAAGLANRVTFSYAD 119 (273)
T ss_dssp HHHHHHHHHHHHSCCCTTC--EEEEESCTTSHHHHHHHHHSCCEEEEE---ESCHHHHHHHHHHHHHTTCTTTEEEEECC
T ss_pred HHHHHHHHHHHhcCCCCCC--EEEEeCCCCCHHHHHHHHhcCCEEEEE---eCCHHHHHHHHHHHHhcCCCcceEEEECc
Confidence 3455566666666655555 9999999999999999985 6667777 8899998888754 33 48889999
Q ss_pred cccCCCCCCCeeEEEecccccccccChHHHHHHHHhcccCCcEEEEEeC
Q 006662 273 SIRLPYPSRAFDMAHCSRCLIPWGQYDGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 273 ~~~Lpf~~~sFDlV~~s~~L~h~~~d~~~~L~el~RvLKPGG~Liis~p 321 (636)
...+|+++++||+|++..+++|+ +++..+++++.++|||||++++..+
T Consensus 120 ~~~~~~~~~~fD~v~~~~~l~~~-~~~~~~l~~~~~~L~pgG~l~i~~~ 167 (273)
T 3bus_A 120 AMDLPFEDASFDAVWALESLHHM-PDRGRALREMARVLRPGGTVAIADF 167 (273)
T ss_dssp TTSCCSCTTCEEEEEEESCTTTS-SCHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred cccCCCCCCCccEEEEechhhhC-CCHHHHHHHHHHHcCCCeEEEEEEe
Confidence 99999999999999999999665 5789999999999999999999864
No 21
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.45 E-value=6.4e-13 Score=135.27 Aligned_cols=98 Identities=15% Similarity=0.111 Sum_probs=83.9
Q ss_pred cEEEEeCCCCcHHHHHHhhcCCEEEEcCcCCchHHHHHHHHHcC----------------------CCeEEEEeccccCC
Q 006662 220 RTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALERG----------------------VPALIGVMASIRLP 277 (636)
Q Consensus 220 r~VLDIGCGtG~~a~~La~~~v~vv~i~p~Dis~a~l~~A~erg----------------------~~~~~~~~d~~~Lp 277 (636)
.+|||+|||+|..+.+|+++|..++++ |+|+.+++.|+++. .++.+.++|...++
T Consensus 70 ~~vLD~GCG~G~~~~~La~~G~~V~gv---D~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l~ 146 (252)
T 2gb4_A 70 LRVFFPLCGKAIEMKWFADRGHTVVGV---EISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDLP 146 (252)
T ss_dssp CEEEETTCTTCTHHHHHHHTTCEEEEE---CSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTGG
T ss_pred CeEEEeCCCCcHHHHHHHHCCCeEEEE---ECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccCC
Confidence 489999999999999999999888888 99999999986542 46789999999988
Q ss_pred CCC-CCeeEEEecccccccccCh-HHHHHHHHhcccCCcEEEEEe
Q 006662 278 YPS-RAFDMAHCSRCLIPWGQYD-GLYLIEVDRVLRPGGYWILSG 320 (636)
Q Consensus 278 f~~-~sFDlV~~s~~L~h~~~d~-~~~L~el~RvLKPGG~Liis~ 320 (636)
+++ ++||+|++..+++++.... ..+++++.|+|||||+|++.+
T Consensus 147 ~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~ 191 (252)
T 2gb4_A 147 RANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAV 191 (252)
T ss_dssp GGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred cccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEE
Confidence 764 8999999998887765433 679999999999999997553
No 22
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.45 E-value=1.1e-12 Score=132.75 Aligned_cols=113 Identities=18% Similarity=0.156 Sum_probs=93.1
Q ss_pred HHHHHHHHHhhc-cCCCCCcEEEEeCCCCcHHHHHHhhcC-CEEEEcCcCCchHHHHHHHHHc----CC--CeEEEEecc
Q 006662 202 DAYIDDIGKLIN-LKDGSIRTAIDTGCGVASWGAYLMSRN-ILAVSFAPRDTHEAQVQFALER----GV--PALIGVMAS 273 (636)
Q Consensus 202 ~~~id~L~~lL~-l~~g~~r~VLDIGCGtG~~a~~La~~~-v~vv~i~p~Dis~a~l~~A~er----g~--~~~~~~~d~ 273 (636)
......+.+.+. +.++ .+|||||||+|.++..+++.+ ..++++ |+++.+++.|+++ +. .+.+...|.
T Consensus 31 ~~~~~~~l~~l~~~~~~--~~vLDiGcG~G~~~~~la~~~~~~v~gv---D~s~~~~~~a~~~~~~~~~~~~v~~~~~d~ 105 (267)
T 3kkz_A 31 PEVTLKALSFIDNLTEK--SLIADIGCGTGGQTMVLAGHVTGQVTGL---DFLSGFIDIFNRNARQSGLQNRVTGIVGSM 105 (267)
T ss_dssp HHHHHHHHTTCCCCCTT--CEEEEETCTTCHHHHHHHTTCSSEEEEE---ESCHHHHHHHHHHHHHTTCTTTEEEEECCT
T ss_pred HHHHHHHHHhcccCCCC--CEEEEeCCCCCHHHHHHHhccCCEEEEE---eCCHHHHHHHHHHHHHcCCCcCcEEEEcCh
Confidence 444555666665 3334 499999999999999999984 466777 8899999888755 33 489999999
Q ss_pred ccCCCCCCCeeEEEecccccccccChHHHHHHHHhcccCCcEEEEEeC
Q 006662 274 IRLPYPSRAFDMAHCSRCLIPWGQYDGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 274 ~~Lpf~~~sFDlV~~s~~L~h~~~d~~~~L~el~RvLKPGG~Liis~p 321 (636)
..+|+++++||+|++..+++|+ ++..+++++.++|||||++++..+
T Consensus 106 ~~~~~~~~~fD~i~~~~~~~~~--~~~~~l~~~~~~LkpgG~l~~~~~ 151 (267)
T 3kkz_A 106 DDLPFRNEELDLIWSEGAIYNI--GFERGLNEWRKYLKKGGYLAVSEC 151 (267)
T ss_dssp TSCCCCTTCEEEEEESSCGGGT--CHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred hhCCCCCCCEEEEEEcCCceec--CHHHHHHHHHHHcCCCCEEEEEEe
Confidence 9999999999999999999666 789999999999999999999875
No 23
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.45 E-value=4.2e-13 Score=134.03 Aligned_cols=112 Identities=19% Similarity=0.246 Sum_probs=93.5
Q ss_pred HHHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhcCCEEEEcCcCCchHHHHHHHHHc----C-CCeEEEEeccccCCC
Q 006662 204 YIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALER----G-VPALIGVMASIRLPY 278 (636)
Q Consensus 204 ~id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~~v~vv~i~p~Dis~a~l~~A~er----g-~~~~~~~~d~~~Lpf 278 (636)
....+.+.+...++. +|||||||+|.++..+++.+..++++ |+++.+++.++++ + .++.+...+...+|+
T Consensus 9 ~~~~~~~~~~~~~~~--~vLDiGcG~G~~~~~l~~~~~~v~~v---D~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~ 83 (239)
T 1xxl_A 9 SLGLMIKTAECRAEH--RVLDIGAGAGHTALAFSPYVQECIGV---DATKEMVEVASSFAQEKGVENVRFQQGTAESLPF 83 (239)
T ss_dssp HHHHHHHHHTCCTTC--EEEEESCTTSHHHHHHGGGSSEEEEE---ESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCS
T ss_pred CcchHHHHhCcCCCC--EEEEEccCcCHHHHHHHHhCCEEEEE---ECCHHHHHHHHHHHHHcCCCCeEEEecccccCCC
Confidence 334555666666555 99999999999999999987777777 8899998887654 3 358888999999999
Q ss_pred CCCCeeEEEecccccccccChHHHHHHHHhcccCCcEEEEEeC
Q 006662 279 PSRAFDMAHCSRCLIPWGQYDGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 279 ~~~sFDlV~~s~~L~h~~~d~~~~L~el~RvLKPGG~Liis~p 321 (636)
++++||+|++..+++|+. ++..++.++.++|||||++++..+
T Consensus 84 ~~~~fD~v~~~~~l~~~~-~~~~~l~~~~~~LkpgG~l~~~~~ 125 (239)
T 1xxl_A 84 PDDSFDIITCRYAAHHFS-DVRKAVREVARVLKQDGRFLLVDH 125 (239)
T ss_dssp CTTCEEEEEEESCGGGCS-CHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCcEEEEEECCchhhcc-CHHHHHHHHHHHcCCCcEEEEEEc
Confidence 999999999999997764 889999999999999999999864
No 24
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.44 E-value=5.9e-13 Score=135.84 Aligned_cols=108 Identities=15% Similarity=0.204 Sum_probs=91.6
Q ss_pred HHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhcCCEEEEcCcCCchHHHHHHHHHcCCCeEEEEeccccCCCCCCCeeEE
Q 006662 207 DIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALERGVPALIGVMASIRLPYPSRAFDMA 286 (636)
Q Consensus 207 ~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~~v~vv~i~p~Dis~a~l~~A~erg~~~~~~~~d~~~Lpf~~~sFDlV 286 (636)
.+.+.+...++. +|||||||+|.++..+++.+..++++ |+++.+++.++++..++.+..+|...+|+ +++||+|
T Consensus 48 ~l~~~l~~~~~~--~vLDiGcG~G~~~~~l~~~~~~v~gv---D~s~~~~~~a~~~~~~~~~~~~d~~~~~~-~~~fD~v 121 (279)
T 3ccf_A 48 DLLQLLNPQPGE--FILDLGCGTGQLTEKIAQSGAEVLGT---DNAATMIEKARQNYPHLHFDVADARNFRV-DKPLDAV 121 (279)
T ss_dssp HHHHHHCCCTTC--EEEEETCTTSHHHHHHHHTTCEEEEE---ESCHHHHHHHHHHCTTSCEEECCTTTCCC-SSCEEEE
T ss_pred HHHHHhCCCCCC--EEEEecCCCCHHHHHHHhCCCeEEEE---ECCHHHHHHHHhhCCCCEEEECChhhCCc-CCCcCEE
Confidence 344555444444 99999999999999999987777777 99999999998887678888899988887 5799999
Q ss_pred EecccccccccChHHHHHHHHhcccCCcEEEEEeC
Q 006662 287 HCSRCLIPWGQYDGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 287 ~~s~~L~h~~~d~~~~L~el~RvLKPGG~Liis~p 321 (636)
++..++++ ..++..++.++.|+|||||++++..+
T Consensus 122 ~~~~~l~~-~~d~~~~l~~~~~~LkpgG~l~~~~~ 155 (279)
T 3ccf_A 122 FSNAMLHW-VKEPEAAIASIHQALKSGGRFVAEFG 155 (279)
T ss_dssp EEESCGGG-CSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEcchhhh-CcCHHHHHHHHHHhcCCCcEEEEEec
Confidence 99999954 45889999999999999999999865
No 25
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.44 E-value=2.9e-13 Score=131.96 Aligned_cols=132 Identities=17% Similarity=0.156 Sum_probs=98.9
Q ss_pred cEEEEeCCCCcHHHHHHhhcCCEEEEcCcCCchHHHHHHHHHcCCCeEEEEeccccCCCCCCCeeEEEeccccccccc-C
Q 006662 220 RTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALERGVPALIGVMASIRLPYPSRAFDMAHCSRCLIPWGQ-Y 298 (636)
Q Consensus 220 r~VLDIGCGtG~~a~~La~~~v~vv~i~p~Dis~a~l~~A~erg~~~~~~~~d~~~Lpf~~~sFDlV~~s~~L~h~~~-d 298 (636)
.+|||||||+|.++..+++.+..++++ |+++.+++.++++. .+.+..++...++ ++++||+|+++.+++|+.. +
T Consensus 45 ~~vLDiGcG~G~~~~~l~~~~~~v~~v---D~s~~~~~~a~~~~-~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~~~~~~ 119 (211)
T 3e23_A 45 AKILELGCGAGYQAEAMLAAGFDVDAT---DGSPELAAEASRRL-GRPVRTMLFHQLD-AIDAYDAVWAHACLLHVPRDE 119 (211)
T ss_dssp CEEEESSCTTSHHHHHHHHTTCEEEEE---ESCHHHHHHHHHHH-TSCCEECCGGGCC-CCSCEEEEEECSCGGGSCHHH
T ss_pred CcEEEECCCCCHHHHHHHHcCCeEEEE---CCCHHHHHHHHHhc-CCceEEeeeccCC-CCCcEEEEEecCchhhcCHHH
Confidence 489999999999999999998877777 99999999998763 3456677888888 7889999999999977652 4
Q ss_pred hHHHHHHHHhcccCCcEEEEEeCCCCccccccCCCCchhhhHHHHHHHHHHHHHhc-eEeec
Q 006662 299 DGLYLIEVDRVLRPGGYWILSGPPVNWESHWKGWNRTTEDLKSEQNGIETIARSLC-WKKLI 359 (636)
Q Consensus 299 ~~~~L~el~RvLKPGG~Liis~p~~~w~~~~~~W~~t~e~l~~~~~~ie~la~~l~-Wk~v~ 359 (636)
...+++++.++|||||++++..+......... +... ......+.+.++++..+ |+.+.
T Consensus 120 ~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~l~~aG~f~~~~ 178 (211)
T 3e23_A 120 LADVLKLIWRALKPGGLFYASYKSGEGEGRDK-LARY--YNYPSEEWLRARYAEAGTWASVA 178 (211)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEECCSSCEECT-TSCE--ECCCCHHHHHHHHHHHCCCSEEE
T ss_pred HHHHHHHHHHhcCCCcEEEEEEcCCCcccccc-cchh--ccCCCHHHHHHHHHhCCCcEEEE
Confidence 47899999999999999999975433221110 0000 00113455777888888 87654
No 26
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.44 E-value=3.9e-13 Score=134.61 Aligned_cols=110 Identities=17% Similarity=0.173 Sum_probs=92.8
Q ss_pred HHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhc--CCEEEEcCcCCchHHHHHHHHHcCCCeEEEEeccccCCCCCCC
Q 006662 205 IDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR--NILAVSFAPRDTHEAQVQFALERGVPALIGVMASIRLPYPSRA 282 (636)
Q Consensus 205 id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~--~v~vv~i~p~Dis~a~l~~A~erg~~~~~~~~d~~~Lpf~~~s 282 (636)
...+.+.+...++ .+|||||||+|.++..++++ +..++++ |+++.+++.++++..++.+...|...++ ++++
T Consensus 22 ~~~l~~~~~~~~~--~~vLdiG~G~G~~~~~l~~~~~~~~v~~~---D~s~~~~~~a~~~~~~~~~~~~d~~~~~-~~~~ 95 (259)
T 2p35_A 22 ARDLLAQVPLERV--LNGYDLGCGPGNSTELLTDRYGVNVITGI---DSDDDMLEKAADRLPNTNFGKADLATWK-PAQK 95 (259)
T ss_dssp HHHHHTTCCCSCC--SSEEEETCTTTHHHHHHHHHHCTTSEEEE---ESCHHHHHHHHHHSTTSEEEECCTTTCC-CSSC
T ss_pred HHHHHHhcCCCCC--CEEEEecCcCCHHHHHHHHhCCCCEEEEE---ECCHHHHHHHHHhCCCcEEEECChhhcC-ccCC
Confidence 3455555544444 48999999999999999987 6666677 8899999999888777899999998888 7889
Q ss_pred eeEEEecccccccccChHHHHHHHHhcccCCcEEEEEeC
Q 006662 283 FDMAHCSRCLIPWGQYDGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 283 FDlV~~s~~L~h~~~d~~~~L~el~RvLKPGG~Liis~p 321 (636)
||+|+++.++++ .+++..++.++.++|||||++++..+
T Consensus 96 fD~v~~~~~l~~-~~~~~~~l~~~~~~L~pgG~l~~~~~ 133 (259)
T 2p35_A 96 ADLLYANAVFQW-VPDHLAVLSQLMDQLESGGVLAVQMP 133 (259)
T ss_dssp EEEEEEESCGGG-STTHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred cCEEEEeCchhh-CCCHHHHHHHHHHhcCCCeEEEEEeC
Confidence 999999999954 46889999999999999999999975
No 27
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.44 E-value=6.1e-13 Score=133.33 Aligned_cols=97 Identities=16% Similarity=0.173 Sum_probs=86.3
Q ss_pred CcEEEEeCCCCcHHHHHHhhcCCEEEEcCcCCchHHHHHHHHHc----CCCeEEEEeccccCCCCCCCeeEEEecccccc
Q 006662 219 IRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALER----GVPALIGVMASIRLPYPSRAFDMAHCSRCLIP 294 (636)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~~v~vv~i~p~Dis~a~l~~A~er----g~~~~~~~~d~~~Lpf~~~sFDlV~~s~~L~h 294 (636)
..+|||||||+|.++..+++.+..++++ |+++.+++.++++ ..++.+...|...+++++++||+|++..++++
T Consensus 40 ~~~vLDiG~G~G~~~~~l~~~~~~v~~v---D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 116 (263)
T 2yqz_A 40 EPVFLELGVGTGRIALPLIARGYRYIAL---DADAAMLEVFRQKIAGVDRKVQVVQADARAIPLPDESVHGVIVVHLWHL 116 (263)
T ss_dssp CCEEEEETCTTSTTHHHHHTTTCEEEEE---ESCHHHHHHHHHHTTTSCTTEEEEESCTTSCCSCTTCEEEEEEESCGGG
T ss_pred CCEEEEeCCcCCHHHHHHHHCCCEEEEE---ECCHHHHHHHHHHhhccCCceEEEEcccccCCCCCCCeeEEEECCchhh
Confidence 3499999999999999999988777777 9999999999876 35688999999999998999999999999955
Q ss_pred cccChHHHHHHHHhcccCCcEEEEE
Q 006662 295 WGQYDGLYLIEVDRVLRPGGYWILS 319 (636)
Q Consensus 295 ~~~d~~~~L~el~RvLKPGG~Liis 319 (636)
.+++..++.++.++|||||++++.
T Consensus 117 -~~~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 117 -VPDWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp -CTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred -cCCHHHHHHHHHHHCCCCcEEEEE
Confidence 458899999999999999999998
No 28
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.44 E-value=1.2e-12 Score=136.10 Aligned_cols=110 Identities=16% Similarity=0.162 Sum_probs=92.2
Q ss_pred HHHHHHhhc-cCCCCCcEEEEeCCCCcHHHHHHhhc-CCEEEEcCcCCchHHHHHHHHHc----CC--CeEEEEeccccC
Q 006662 205 IDDIGKLIN-LKDGSIRTAIDTGCGVASWGAYLMSR-NILAVSFAPRDTHEAQVQFALER----GV--PALIGVMASIRL 276 (636)
Q Consensus 205 id~L~~lL~-l~~g~~r~VLDIGCGtG~~a~~La~~-~v~vv~i~p~Dis~a~l~~A~er----g~--~~~~~~~d~~~L 276 (636)
.+.+.+.+. ..++. +|||||||+|.++..++++ +..++++ |+++.+++.|+++ +. .+.+..+|...+
T Consensus 105 ~~~l~~~l~~~~~~~--~vLDiGcG~G~~~~~la~~~~~~v~gv---D~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 179 (312)
T 3vc1_A 105 AEFLMDHLGQAGPDD--TLVDAGCGRGGSMVMAHRRFGSRVEGV---TLSAAQADFGNRRARELRIDDHVRSRVCNMLDT 179 (312)
T ss_dssp HHHHHTTSCCCCTTC--EEEEESCTTSHHHHHHHHHHCCEEEEE---ESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSC
T ss_pred HHHHHHHhccCCCCC--EEEEecCCCCHHHHHHHHHcCCEEEEE---eCCHHHHHHHHHHHHHcCCCCceEEEECChhcC
Confidence 344556555 44444 9999999999999999998 7777777 8899999888754 33 488999999999
Q ss_pred CCCCCCeeEEEecccccccccChHHHHHHHHhcccCCcEEEEEeC
Q 006662 277 PYPSRAFDMAHCSRCLIPWGQYDGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 277 pf~~~sFDlV~~s~~L~h~~~d~~~~L~el~RvLKPGG~Liis~p 321 (636)
|+++++||+|++..+++|+ +...+++++.++|||||++++..+
T Consensus 180 ~~~~~~fD~V~~~~~l~~~--~~~~~l~~~~~~LkpgG~l~~~~~ 222 (312)
T 3vc1_A 180 PFDKGAVTASWNNESTMYV--DLHDLFSEHSRFLKVGGRYVTITG 222 (312)
T ss_dssp CCCTTCEEEEEEESCGGGS--CHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCCCCEeEEEECCchhhC--CHHHHHHHHHHHcCCCcEEEEEEc
Confidence 9999999999999999666 489999999999999999999864
No 29
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.43 E-value=3.3e-13 Score=136.67 Aligned_cols=112 Identities=18% Similarity=0.194 Sum_probs=96.0
Q ss_pred HHHHHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhcCCEEEEcCcCCchHHHHHHHHHcCCCeEEEEeccccCCCCCC
Q 006662 202 DAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALERGVPALIGVMASIRLPYPSR 281 (636)
Q Consensus 202 ~~~id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~~v~vv~i~p~Dis~a~l~~A~erg~~~~~~~~d~~~Lpf~~~ 281 (636)
....+.+.+.++..++. +|||||||+|.++..+++.+..++++ |+++.+++.++++. ++.+.+.|...+|++++
T Consensus 20 ~~~~~~l~~~~~~~~~~--~vLDiGcG~G~~~~~l~~~~~~v~gv---D~s~~~~~~a~~~~-~~~~~~~d~~~~~~~~~ 93 (261)
T 3ege_A 20 IRIVNAIINLLNLPKGS--VIADIGAGTGGYSVALANQGLFVYAV---EPSIVMRQQAVVHP-QVEWFTGYAENLALPDK 93 (261)
T ss_dssp HHHHHHHHHHHCCCTTC--EEEEETCTTSHHHHHHHTTTCEEEEE---CSCHHHHHSSCCCT-TEEEECCCTTSCCSCTT
T ss_pred HHHHHHHHHHhCCCCCC--EEEEEcCcccHHHHHHHhCCCEEEEE---eCCHHHHHHHHhcc-CCEEEECchhhCCCCCC
Confidence 34666777777655544 99999999999999999988888888 99999998886655 78999999999999999
Q ss_pred CeeEEEecccccccccChHHHHHHHHhcccCCcEEEEEeC
Q 006662 282 AFDMAHCSRCLIPWGQYDGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 282 sFDlV~~s~~L~h~~~d~~~~L~el~RvLKPGG~Liis~p 321 (636)
+||+|++..+++|+ .++..+++++.|+|| ||++++..+
T Consensus 94 ~fD~v~~~~~l~~~-~~~~~~l~~~~~~Lk-gG~~~~~~~ 131 (261)
T 3ege_A 94 SVDGVISILAIHHF-SHLEKSFQEMQRIIR-DGTIVLLTF 131 (261)
T ss_dssp CBSEEEEESCGGGC-SSHHHHHHHHHHHBC-SSCEEEEEE
T ss_pred CEeEEEEcchHhhc-cCHHHHHHHHHHHhC-CcEEEEEEc
Confidence 99999999999776 688999999999999 998888764
No 30
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.42 E-value=1.2e-12 Score=129.33 Aligned_cols=116 Identities=17% Similarity=0.175 Sum_probs=93.2
Q ss_pred HHHHHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhcCCEEEEcCcCCchHHHHHHHHHc----CCCeEEEEeccccCC
Q 006662 202 DAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALER----GVPALIGVMASIRLP 277 (636)
Q Consensus 202 ~~~id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~~v~vv~i~p~Dis~a~l~~A~er----g~~~~~~~~d~~~Lp 277 (636)
+...+.+.+++........+|||||||+|.++..+++.+..++++ |+++.+++.++++ +..+.+...|...++
T Consensus 21 ~~~~~~~~~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~---D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~ 97 (246)
T 1y8c_A 21 KKWSDFIIEKCVENNLVFDDYLDLACGTGNLTENLCPKFKNTWAV---DLSQEMLSEAENKFRSQGLKPRLACQDISNLN 97 (246)
T ss_dssp HHHHHHHHHHHHTTTCCTTEEEEETCTTSTTHHHHGGGSSEEEEE---CSCHHHHHHHHHHHHHTTCCCEEECCCGGGCC
T ss_pred HHHHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHCCCcEEEE---ECCHHHHHHHHHHHhhcCCCeEEEecccccCC
Confidence 445556666665432234599999999999999999998777777 8999999888755 336788888988888
Q ss_pred CCCCCeeEEEecc-cccccc--cChHHHHHHHHhcccCCcEEEEEeC
Q 006662 278 YPSRAFDMAHCSR-CLIPWG--QYDGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 278 f~~~sFDlV~~s~-~L~h~~--~d~~~~L~el~RvLKPGG~Liis~p 321 (636)
++ ++||+|++.. +++|+. .+...+++++.++|||||++++..+
T Consensus 98 ~~-~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 143 (246)
T 1y8c_A 98 IN-RKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFDIN 143 (246)
T ss_dssp CS-CCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred cc-CCceEEEEcCccccccCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 77 8899999998 997763 3458899999999999999999754
No 31
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.42 E-value=1.1e-12 Score=129.79 Aligned_cols=114 Identities=15% Similarity=0.170 Sum_probs=92.6
Q ss_pred HHHHHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhc--CCEEEEcCcCCchHHHHHHHHHcCC---CeEEEEeccccC
Q 006662 202 DAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR--NILAVSFAPRDTHEAQVQFALERGV---PALIGVMASIRL 276 (636)
Q Consensus 202 ~~~id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~--~v~vv~i~p~Dis~a~l~~A~erg~---~~~~~~~d~~~L 276 (636)
+...+.+.+++.. .....+|||||||+|.++..+++. +..++++ |+++.+++.|+++.. .+.+...|...+
T Consensus 29 ~~~~~~~~~~~~~-~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~v---D~s~~~~~~a~~~~~~~~~~~~~~~d~~~~ 104 (234)
T 3dtn_A 29 DDFYGVSVSIASV-DTENPDILDLGAGTGLLSAFLMEKYPEATFTLV---DMSEKMLEIAKNRFRGNLKVKYIEADYSKY 104 (234)
T ss_dssp HHHHHHHHHTCCC-SCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEE---ESCHHHHHHHHHHTCSCTTEEEEESCTTTC
T ss_pred HHHHHHHHHHhhc-CCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEE---ECCHHHHHHHHHhhccCCCEEEEeCchhcc
Confidence 4444566666652 223459999999999999999998 6677777 999999999987643 688899999998
Q ss_pred CCCCCCeeEEEecccccccccChH--HHHHHHHhcccCCcEEEEEeC
Q 006662 277 PYPSRAFDMAHCSRCLIPWGQYDG--LYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 277 pf~~~sFDlV~~s~~L~h~~~d~~--~~L~el~RvLKPGG~Liis~p 321 (636)
+++ ++||+|++..+++|+. ++. .+++++.|+|||||++++..+
T Consensus 105 ~~~-~~fD~v~~~~~l~~~~-~~~~~~~l~~~~~~LkpgG~l~~~~~ 149 (234)
T 3dtn_A 105 DFE-EKYDMVVSALSIHHLE-DEDKKELYKRSYSILKESGIFINADL 149 (234)
T ss_dssp CCC-SCEEEEEEESCGGGSC-HHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCC-CCceEEEEeCccccCC-HHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 887 8999999999997764 443 699999999999999999864
No 32
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.42 E-value=9.1e-13 Score=126.31 Aligned_cols=108 Identities=16% Similarity=0.274 Sum_probs=87.6
Q ss_pred HHHhhccCCCCCcEEEEeCCCCcHHHHHHhhcCCEEEEcCcCCchHHHHHHHHHc----CC-CeEEEEeccccCCCCCCC
Q 006662 208 IGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALER----GV-PALIGVMASIRLPYPSRA 282 (636)
Q Consensus 208 L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~~v~vv~i~p~Dis~a~l~~A~er----g~-~~~~~~~d~~~Lpf~~~s 282 (636)
+.+.+...++. +|||+|||+|.++..+++.+..++++ |+++.+++.++++ +. ++.+...|...+++ +++
T Consensus 24 l~~~~~~~~~~--~vLdiG~G~G~~~~~l~~~~~~v~~v---D~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~-~~~ 97 (199)
T 2xvm_A 24 VLEAVKVVKPG--KTLDLGCGNGRNSLYLAANGYDVDAW---DKNAMSIANVERIKSIENLDNLHTRVVDLNNLTF-DRQ 97 (199)
T ss_dssp HHHHTTTSCSC--EEEEETCTTSHHHHHHHHTTCEEEEE---ESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCC-CCC
T ss_pred HHHHhhccCCC--eEEEEcCCCCHHHHHHHHCCCeEEEE---ECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCC-CCC
Confidence 44445444444 99999999999999999998777777 8898888887653 33 68888899888888 789
Q ss_pred eeEEEeccccccccc-ChHHHHHHHHhcccCCcEEEEEeC
Q 006662 283 FDMAHCSRCLIPWGQ-YDGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 283 FDlV~~s~~L~h~~~-d~~~~L~el~RvLKPGG~Liis~p 321 (636)
||+|++..+++|+.. +...++.++.++|||||++++..+
T Consensus 98 ~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 137 (199)
T 2xvm_A 98 YDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAA 137 (199)
T ss_dssp EEEEEEESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred ceEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEe
Confidence 999999999976643 458899999999999999888653
No 33
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.42 E-value=7.8e-13 Score=129.65 Aligned_cols=113 Identities=13% Similarity=0.103 Sum_probs=90.1
Q ss_pred HHHHHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhcC--CEEEEcCcCCchHHHHHHHHHcCC----------CeEEE
Q 006662 202 DAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRN--ILAVSFAPRDTHEAQVQFALERGV----------PALIG 269 (636)
Q Consensus 202 ~~~id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~~--v~vv~i~p~Dis~a~l~~A~erg~----------~~~~~ 269 (636)
....+.+.+.+...++. +|||||||+|.++..+++++ ..++++ |+++.+++.|+++.. .+.+.
T Consensus 15 ~~~~~~l~~~l~~~~~~--~vLDiGcG~G~~~~~l~~~~~~~~v~gv---D~s~~~~~~a~~~~~~~~~~~~~~~~v~~~ 89 (217)
T 3jwh_A 15 QQRMNGVVAALKQSNAR--RVIDLGCGQGNLLKILLKDSFFEQITGV---DVSYRSLEIAQERLDRLRLPRNQWERLQLI 89 (217)
T ss_dssp HHHHHHHHHHHHHTTCC--EEEEETCTTCHHHHHHHHCTTCSEEEEE---ESCHHHHHHHHHHHTTCCCCHHHHTTEEEE
T ss_pred HHHHHHHHHHHHhcCCC--EEEEeCCCCCHHHHHHHhhCCCCEEEEE---ECCHHHHHHHHHHHHHhcCCcccCcceEEE
Confidence 34455666666555544 99999999999999999875 466677 889999999876621 57888
Q ss_pred EeccccCCCCCCCeeEEEecccccccccCh--HHHHHHHHhcccCCcEEEEEe
Q 006662 270 VMASIRLPYPSRAFDMAHCSRCLIPWGQYD--GLYLIEVDRVLRPGGYWILSG 320 (636)
Q Consensus 270 ~~d~~~Lpf~~~sFDlV~~s~~L~h~~~d~--~~~L~el~RvLKPGG~Liis~ 320 (636)
..|...++.+.++||+|+++.+++|+. ++ ..+++++.++|||||++++..
T Consensus 90 ~~d~~~~~~~~~~fD~v~~~~~l~~~~-~~~~~~~l~~~~~~LkpgG~li~~~ 141 (217)
T 3jwh_A 90 QGALTYQDKRFHGYDAATVIEVIEHLD-LSRLGAFERVLFEFAQPKIVIVTTP 141 (217)
T ss_dssp ECCTTSCCGGGCSCSEEEEESCGGGCC-HHHHHHHHHHHHTTTCCSEEEEEEE
T ss_pred eCCcccccccCCCcCEEeeHHHHHcCC-HHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 888877777778999999999997774 44 789999999999999777664
No 34
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.42 E-value=3.5e-13 Score=137.98 Aligned_cols=114 Identities=18% Similarity=0.290 Sum_probs=94.6
Q ss_pred HHHHHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhcCCEEEEcCcCCchHHHHHHHHHcC---------CCeEEEEec
Q 006662 202 DAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALERG---------VPALIGVMA 272 (636)
Q Consensus 202 ~~~id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~~v~vv~i~p~Dis~a~l~~A~erg---------~~~~~~~~d 272 (636)
..+.+.+.+.+...++. +|||||||+|.++..|++.+..++++ |+++.+++.|+++. ..+.+...+
T Consensus 43 ~~~~~~l~~~l~~~~~~--~vLDiGcG~G~~~~~l~~~~~~v~gv---D~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d 117 (293)
T 3thr_A 43 AEYKAWLLGLLRQHGCH--RVLDVACGTGVDSIMLVEEGFSVTSV---DASDKMLKYALKERWNRRKEPAFDKWVIEEAN 117 (293)
T ss_dssp HHHHHHHHHHHHHTTCC--EEEETTCTTSHHHHHHHHTTCEEEEE---ESCHHHHHHHHHHHHHTTTSHHHHTCEEEECC
T ss_pred HHHHHHHHHHhcccCCC--EEEEecCCCCHHHHHHHHCCCeEEEE---ECCHHHHHHHHHhhhhcccccccceeeEeecC
Confidence 55666677777655544 89999999999999999998877777 99999999887541 346778888
Q ss_pred cccCC---CCCCCeeEEEec-ccccccccC-------hHHHHHHHHhcccCCcEEEEEeC
Q 006662 273 SIRLP---YPSRAFDMAHCS-RCLIPWGQY-------DGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 273 ~~~Lp---f~~~sFDlV~~s-~~L~h~~~d-------~~~~L~el~RvLKPGG~Liis~p 321 (636)
...++ +++++||+|+|. .+++|+. + ...+++++.++|||||+|++..+
T Consensus 118 ~~~~~~~~~~~~~fD~V~~~g~~l~~~~-~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 176 (293)
T 3thr_A 118 WLTLDKDVPAGDGFDAVICLGNSFAHLP-DSKGDQSEHRLALKNIASMVRPGGLLVIDHR 176 (293)
T ss_dssp GGGHHHHSCCTTCEEEEEECTTCGGGSC-CSSSSSHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred hhhCccccccCCCeEEEEEcChHHhhcC-ccccCHHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 88877 888999999998 7886765 5 68999999999999999999976
No 35
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.41 E-value=8.1e-13 Score=133.59 Aligned_cols=99 Identities=25% Similarity=0.408 Sum_probs=87.7
Q ss_pred CcEEEEeCCCCcHHHHHHhhcCCEEEEcCcCCchHHHHHHHHHcCCCeEEEEeccccCCCCCCCeeEEEecccccccccC
Q 006662 219 IRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALERGVPALIGVMASIRLPYPSRAFDMAHCSRCLIPWGQY 298 (636)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~~v~vv~i~p~Dis~a~l~~A~erg~~~~~~~~d~~~Lpf~~~sFDlV~~s~~L~h~~~d 298 (636)
..+|||||||+|.++..+++.+..++++ |+++.+++.++++.... +...+...+++++++||+|++..++.|+..+
T Consensus 55 ~~~vLDiGcG~G~~~~~l~~~~~~v~gv---D~s~~~l~~a~~~~~~~-~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~~ 130 (260)
T 2avn_A 55 PCRVLDLGGGTGKWSLFLQERGFEVVLV---DPSKEMLEVAREKGVKN-VVEAKAEDLPFPSGAFEAVLALGDVLSYVEN 130 (260)
T ss_dssp CCEEEEETCTTCHHHHHHHTTTCEEEEE---ESCHHHHHHHHHHTCSC-EEECCTTSCCSCTTCEEEEEECSSHHHHCSC
T ss_pred CCeEEEeCCCcCHHHHHHHHcCCeEEEE---eCCHHHHHHHHhhcCCC-EEECcHHHCCCCCCCEEEEEEcchhhhcccc
Confidence 3489999999999999999998777777 99999999998876533 7778888899989999999999888788778
Q ss_pred hHHHHHHHHhcccCCcEEEEEeC
Q 006662 299 DGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 299 ~~~~L~el~RvLKPGG~Liis~p 321 (636)
+..+++++.++|||||.+++..+
T Consensus 131 ~~~~l~~~~~~LkpgG~l~~~~~ 153 (260)
T 2avn_A 131 KDKAFSEIRRVLVPDGLLIATVD 153 (260)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHcCCCeEEEEEeC
Confidence 89999999999999999999876
No 36
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.41 E-value=4.4e-12 Score=120.46 Aligned_cols=122 Identities=15% Similarity=0.078 Sum_probs=97.0
Q ss_pred cEEEEeCCCCcHHHHHHhhcCCEEEEcCcCCchHHHHHHHHHcCCCeEEEEeccccCCCCCCCeeEEEec-ccccccc-c
Q 006662 220 RTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALERGVPALIGVMASIRLPYPSRAFDMAHCS-RCLIPWG-Q 297 (636)
Q Consensus 220 r~VLDIGCGtG~~a~~La~~~v~vv~i~p~Dis~a~l~~A~erg~~~~~~~~d~~~Lpf~~~sFDlV~~s-~~L~h~~-~ 297 (636)
.+|||+|||+|.++..+++.+..++++ |+++.+++.++++..++.+...+...+++++++||+|+++ .++++.. +
T Consensus 48 ~~vLdiG~G~G~~~~~l~~~~~~v~~~---D~~~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~~~~~~~~~~~ 124 (195)
T 3cgg_A 48 AKILDAGCGQGRIGGYLSKQGHDVLGT---DLDPILIDYAKQDFPEARWVVGDLSVDQISETDFDLIVSAGNVMGFLAED 124 (195)
T ss_dssp CEEEEETCTTTHHHHHHHHTTCEEEEE---ESCHHHHHHHHHHCTTSEEEECCTTTSCCCCCCEEEEEECCCCGGGSCHH
T ss_pred CeEEEECCCCCHHHHHHHHCCCcEEEE---cCCHHHHHHHHHhCCCCcEEEcccccCCCCCCceeEEEECCcHHhhcChH
Confidence 389999999999999999998777777 8999999999988777888889988888888999999998 5664443 2
Q ss_pred ChHHHHHHHHhcccCCcEEEEEeCCCCccccccCCCCchhhhHHHHHHHHHHHHHhceEeec
Q 006662 298 YDGLYLIEVDRVLRPGGYWILSGPPVNWESHWKGWNRTTEDLKSEQNGIETIARSLCWKKLI 359 (636)
Q Consensus 298 d~~~~L~el~RvLKPGG~Liis~p~~~w~~~~~~W~~t~e~l~~~~~~ie~la~~l~Wk~v~ 359 (636)
+...++.++.++|+|||.+++..+.... .....+.++++..+|+.+.
T Consensus 125 ~~~~~l~~~~~~l~~~G~l~~~~~~~~~---------------~~~~~~~~~l~~~Gf~~~~ 171 (195)
T 3cgg_A 125 GREPALANIHRALGADGRAVIGFGAGRG---------------WVFGDFLEVAERVGLELEN 171 (195)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEEETTSS---------------CCHHHHHHHHHHHTEEEEE
T ss_pred HHHHHHHHHHHHhCCCCEEEEEeCCCCC---------------cCHHHHHHHHHHcCCEEee
Confidence 2378999999999999999998652210 1133466677777887653
No 37
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.41 E-value=5.9e-13 Score=133.36 Aligned_cols=113 Identities=17% Similarity=0.181 Sum_probs=92.3
Q ss_pred HHHHHHHHHhhc-cCCCCCcEEEEeCCCCcHHHHHHhhcCC-EEEEcCcCCchHHHHHHHHHc----CC--CeEEEEecc
Q 006662 202 DAYIDDIGKLIN-LKDGSIRTAIDTGCGVASWGAYLMSRNI-LAVSFAPRDTHEAQVQFALER----GV--PALIGVMAS 273 (636)
Q Consensus 202 ~~~id~L~~lL~-l~~g~~r~VLDIGCGtG~~a~~La~~~v-~vv~i~p~Dis~a~l~~A~er----g~--~~~~~~~d~ 273 (636)
......+.+.+. +.++. +|||||||+|.++..+++... .++++ |+++.+++.++++ +. .+.+...|.
T Consensus 31 ~~~~~~~l~~l~~~~~~~--~vLDiG~G~G~~~~~l~~~~~~~v~~v---D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~ 105 (257)
T 3f4k_A 31 PEATRKAVSFINELTDDA--KIADIGCGTGGQTLFLADYVKGQITGI---DLFPDFIEIFNENAVKANCADRVKGITGSM 105 (257)
T ss_dssp HHHHHHHHTTSCCCCTTC--EEEEETCTTSHHHHHHHHHCCSEEEEE---ESCHHHHHHHHHHHHHTTCTTTEEEEECCT
T ss_pred HHHHHHHHHHHhcCCCCC--eEEEeCCCCCHHHHHHHHhCCCeEEEE---ECCHHHHHHHHHHHHHcCCCCceEEEECCh
Confidence 444555666553 34444 999999999999999999853 66666 8899999887654 33 288999999
Q ss_pred ccCCCCCCCeeEEEecccccccccChHHHHHHHHhcccCCcEEEEEeC
Q 006662 274 IRLPYPSRAFDMAHCSRCLIPWGQYDGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 274 ~~Lpf~~~sFDlV~~s~~L~h~~~d~~~~L~el~RvLKPGG~Liis~p 321 (636)
..+|+++++||+|++..+++|+ ++..+++++.++|||||++++..+
T Consensus 106 ~~~~~~~~~fD~v~~~~~l~~~--~~~~~l~~~~~~L~pgG~l~~~~~ 151 (257)
T 3f4k_A 106 DNLPFQNEELDLIWSEGAIYNI--GFERGMNEWSKYLKKGGFIAVSEA 151 (257)
T ss_dssp TSCSSCTTCEEEEEEESCSCCC--CHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred hhCCCCCCCEEEEEecChHhhc--CHHHHHHHHHHHcCCCcEEEEEEe
Confidence 9999999999999999999666 688999999999999999999975
No 38
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.41 E-value=8.8e-13 Score=133.10 Aligned_cols=97 Identities=13% Similarity=0.117 Sum_probs=85.5
Q ss_pred cEEEEeCCCCcHHHHHHhhcCCEEEEcCcCCchHHHHHHHHHcCCCeEEEEeccccCCCCCCCeeEEEecc-cccccc--
Q 006662 220 RTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALERGVPALIGVMASIRLPYPSRAFDMAHCSR-CLIPWG-- 296 (636)
Q Consensus 220 r~VLDIGCGtG~~a~~La~~~v~vv~i~p~Dis~a~l~~A~erg~~~~~~~~d~~~Lpf~~~sFDlV~~s~-~L~h~~-- 296 (636)
.+|||||||+|.++..+++++..++++ |+++.+++.|+++...+.+..+|...+++ +++||+|+|.. +++|+.
T Consensus 52 ~~vLDiGcG~G~~~~~l~~~~~~v~gv---D~s~~~~~~a~~~~~~~~~~~~d~~~~~~-~~~fD~v~~~~~~l~~~~~~ 127 (263)
T 3pfg_A 52 ASLLDVACGTGMHLRHLADSFGTVEGL---ELSADMLAIARRRNPDAVLHHGDMRDFSL-GRRFSAVTCMFSSIGHLAGQ 127 (263)
T ss_dssp CEEEEETCTTSHHHHHHTTTSSEEEEE---ESCHHHHHHHHHHCTTSEEEECCTTTCCC-SCCEEEEEECTTGGGGSCHH
T ss_pred CcEEEeCCcCCHHHHHHHHcCCeEEEE---ECCHHHHHHHHhhCCCCEEEECChHHCCc-cCCcCEEEEcCchhhhcCCH
Confidence 489999999999999999998777777 99999999999887788999999988887 78999999998 886664
Q ss_pred cChHHHHHHHHhcccCCcEEEEEe
Q 006662 297 QYDGLYLIEVDRVLRPGGYWILSG 320 (636)
Q Consensus 297 ~d~~~~L~el~RvLKPGG~Liis~ 320 (636)
.+...+++++.++|||||+|++..
T Consensus 128 ~~~~~~l~~~~~~L~pgG~l~i~~ 151 (263)
T 3pfg_A 128 AELDAALERFAAHVLPDGVVVVEP 151 (263)
T ss_dssp HHHHHHHHHHHHTEEEEEEEEECC
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEe
Confidence 244689999999999999999974
No 39
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.41 E-value=1.4e-12 Score=129.21 Aligned_cols=109 Identities=20% Similarity=0.281 Sum_probs=92.4
Q ss_pred HHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhcCC-EEEEcCcCCchHHHHHHHHHcCC--CeEEEEeccccCCCCCCCe
Q 006662 207 DIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNI-LAVSFAPRDTHEAQVQFALERGV--PALIGVMASIRLPYPSRAF 283 (636)
Q Consensus 207 ~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~~v-~vv~i~p~Dis~a~l~~A~erg~--~~~~~~~d~~~Lpf~~~sF 283 (636)
.+.++++..++. +|||||||+|.++..+++++. .++++ |+++.+++.++++.. .+.+...|...+++++++|
T Consensus 34 ~l~~~~~~~~~~--~vLdiG~G~G~~~~~l~~~~~~~v~~v---D~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~f 108 (243)
T 3bkw_A 34 ALRAMLPEVGGL--RIVDLGCGFGWFCRWAHEHGASYVLGL---DLSEKMLARARAAGPDTGITYERADLDKLHLPQDSF 108 (243)
T ss_dssp HHHHHSCCCTTC--EEEEETCTTCHHHHHHHHTTCSEEEEE---ESCHHHHHHHHHTSCSSSEEEEECCGGGCCCCTTCE
T ss_pred HHHHhccccCCC--EEEEEcCcCCHHHHHHHHCCCCeEEEE---cCCHHHHHHHHHhcccCCceEEEcChhhccCCCCCc
Confidence 455555544444 999999999999999999877 77777 899999999987753 4788888998888888999
Q ss_pred eEEEecccccccccChHHHHHHHHhcccCCcEEEEEeC
Q 006662 284 DMAHCSRCLIPWGQYDGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 284 DlV~~s~~L~h~~~d~~~~L~el~RvLKPGG~Liis~p 321 (636)
|+|++..+++|+ +++..+++++.++|||||+++++.+
T Consensus 109 D~v~~~~~l~~~-~~~~~~l~~~~~~L~pgG~l~~~~~ 145 (243)
T 3bkw_A 109 DLAYSSLALHYV-EDVARLFRTVHQALSPGGHFVFSTE 145 (243)
T ss_dssp EEEEEESCGGGC-SCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred eEEEEecccccc-chHHHHHHHHHHhcCcCcEEEEEeC
Confidence 999999999666 5889999999999999999999864
No 40
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.40 E-value=7e-13 Score=132.23 Aligned_cols=134 Identities=13% Similarity=0.029 Sum_probs=98.6
Q ss_pred CcEEEEeCCCCcHHHHHHhhcC-CEEEEcCcCCchHHHHHHHHHcCC-----CeEEEEeccccCCCCCCCeeEEEecccc
Q 006662 219 IRTAIDTGCGVASWGAYLMSRN-ILAVSFAPRDTHEAQVQFALERGV-----PALIGVMASIRLPYPSRAFDMAHCSRCL 292 (636)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~~-v~vv~i~p~Dis~a~l~~A~erg~-----~~~~~~~d~~~Lpf~~~sFDlV~~s~~L 292 (636)
..+|||||||+|.++..+++++ ..++++ |+++.+++.|+++.. .+.+...+...+++++++||+|++..++
T Consensus 80 ~~~vLDiGcG~G~~~~~l~~~~~~~v~~v---D~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 156 (241)
T 2ex4_A 80 TSCALDCGAGIGRITKRLLLPLFREVDMV---DITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWIQWVI 156 (241)
T ss_dssp CSEEEEETCTTTHHHHHTTTTTCSEEEEE---ESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCSSCEEEEEEESCG
T ss_pred CCEEEEECCCCCHHHHHHHHhcCCEEEEE---eCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCCCCCCEEEEEEcchh
Confidence 4599999999999999998874 356666 889999999987642 3678888888888888899999999999
Q ss_pred cccccCh--HHHHHHHHhcccCCcEEEEEeCCCCccccccCCCCchhhhHHHHHHHHHHHHHhceEeec
Q 006662 293 IPWGQYD--GLYLIEVDRVLRPGGYWILSGPPVNWESHWKGWNRTTEDLKSEQNGIETIARSLCWKKLI 359 (636)
Q Consensus 293 ~h~~~d~--~~~L~el~RvLKPGG~Liis~p~~~w~~~~~~W~~t~e~l~~~~~~ie~la~~l~Wk~v~ 359 (636)
+|+. ++ ..+++++.++|||||++++..+...... .|...........+++.++++..+|+.+.
T Consensus 157 ~~~~-~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~aGf~~~~ 221 (241)
T 2ex4_A 157 GHLT-DQHLAEFLRRCKGSLRPNGIIVIKDNMAQEGV---ILDDVDSSVCRDLDVVRRIICSAGLSLLA 221 (241)
T ss_dssp GGSC-HHHHHHHHHHHHHHEEEEEEEEEEEEEBSSSE---EEETTTTEEEEBHHHHHHHHHHTTCCEEE
T ss_pred hhCC-HHHHHHHHHHHHHhcCCCeEEEEEEccCCCcc---eecccCCcccCCHHHHHHHHHHcCCeEEE
Confidence 7765 43 4899999999999999999865221100 01111111111345677788888887654
No 41
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.40 E-value=1.6e-12 Score=126.70 Aligned_cols=145 Identities=17% Similarity=0.108 Sum_probs=102.6
Q ss_pred HHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhcCCEEEEcCcCCchHHHHHHHHHcCCCeEEEEeccccC---CCCC-CC
Q 006662 207 DIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALERGVPALIGVMASIRL---PYPS-RA 282 (636)
Q Consensus 207 ~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~~v~vv~i~p~Dis~a~l~~A~erg~~~~~~~~d~~~L---pf~~-~s 282 (636)
.+.+.+....+ .+|||||||+|.++..+++.+..++++ |+++.+++.++++ ....+...+...+ ++.. ++
T Consensus 43 ~~~~~~~~~~~--~~vLdiG~G~G~~~~~l~~~~~~v~~v---D~s~~~~~~a~~~-~~~~~~~~~~~~~~~~~~~~~~~ 116 (227)
T 3e8s_A 43 AILLAILGRQP--ERVLDLGCGEGWLLRALADRGIEAVGV---DGDRTLVDAARAA-GAGEVHLASYAQLAEAKVPVGKD 116 (227)
T ss_dssp HHHHHHHHTCC--SEEEEETCTTCHHHHHHHTTTCEEEEE---ESCHHHHHHHHHT-CSSCEEECCHHHHHTTCSCCCCC
T ss_pred HHHHHhhcCCC--CEEEEeCCCCCHHHHHHHHCCCEEEEE---cCCHHHHHHHHHh-cccccchhhHHhhcccccccCCC
Confidence 44444444444 499999999999999999998877777 9999999999887 4456666666655 5544 45
Q ss_pred eeEEEecccccccccChHHHHHHHHhcccCCcEEEEEeCCCCcccc---ccC-----CCCc------hhhhHHHHHHHHH
Q 006662 283 FDMAHCSRCLIPWGQYDGLYLIEVDRVLRPGGYWILSGPPVNWESH---WKG-----WNRT------TEDLKSEQNGIET 348 (636)
Q Consensus 283 FDlV~~s~~L~h~~~d~~~~L~el~RvLKPGG~Liis~p~~~w~~~---~~~-----W~~t------~e~l~~~~~~ie~ 348 (636)
||+|+++.+++ ..++..+++++.++|||||++++..+....... ... |... ........+++.+
T Consensus 117 fD~v~~~~~l~--~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (227)
T 3e8s_A 117 YDLICANFALL--HQDIIELLSAMRTLLVPGGALVIQTLHPWSVADGDYQDGWREESFAGFAGDWQPMPWYFRTLASWLN 194 (227)
T ss_dssp EEEEEEESCCC--SSCCHHHHHHHHHTEEEEEEEEEEECCTTTTCTTCCSCEEEEECCTTSSSCCCCEEEEECCHHHHHH
T ss_pred ccEEEECchhh--hhhHHHHHHHHHHHhCCCeEEEEEecCccccCccccccccchhhhhccccCcccceEEEecHHHHHH
Confidence 99999999995 568899999999999999999999763221110 000 1110 0001113456778
Q ss_pred HHHHhceEeec
Q 006662 349 IARSLCWKKLI 359 (636)
Q Consensus 349 la~~l~Wk~v~ 359 (636)
+++..+|+.+.
T Consensus 195 ~l~~aGf~~~~ 205 (227)
T 3e8s_A 195 ALDMAGLRLVS 205 (227)
T ss_dssp HHHHTTEEEEE
T ss_pred HHHHcCCeEEE
Confidence 88899997764
No 42
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.40 E-value=2.3e-12 Score=125.92 Aligned_cols=144 Identities=17% Similarity=0.141 Sum_probs=102.6
Q ss_pred HHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhcCCEEEEcCcCCchHHHHHHHHHcCCCeEEEEecccc--CCCCCCCee
Q 006662 207 DIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALERGVPALIGVMASIR--LPYPSRAFD 284 (636)
Q Consensus 207 ~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~~v~vv~i~p~Dis~a~l~~A~erg~~~~~~~~d~~~--Lpf~~~sFD 284 (636)
.+.+.++ . ...+|||+|||+|.++..+++.+..++++ |+++.+++.++++.. .+...+... +++++++||
T Consensus 24 ~l~~~~~-~--~~~~vLdiG~G~G~~~~~l~~~~~~~~~~---D~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~fD 95 (230)
T 3cc8_A 24 NLLKHIK-K--EWKEVLDIGCSSGALGAAIKENGTRVSGI---EAFPEAAEQAKEKLD--HVVLGDIETMDMPYEEEQFD 95 (230)
T ss_dssp HHHTTCC-T--TCSEEEEETCTTSHHHHHHHTTTCEEEEE---ESSHHHHHHHHTTSS--EEEESCTTTCCCCSCTTCEE
T ss_pred HHHHHhc-c--CCCcEEEeCCCCCHHHHHHHhcCCeEEEE---eCCHHHHHHHHHhCC--cEEEcchhhcCCCCCCCccC
Confidence 3445544 2 33499999999999999999987766677 999999999987653 566677665 677788999
Q ss_pred EEEecccccccccChHHHHHHHHhcccCCcEEEEEeCCCCccc-----cccCCCCc-------hhhhHHHHHHHHHHHHH
Q 006662 285 MAHCSRCLIPWGQYDGLYLIEVDRVLRPGGYWILSGPPVNWES-----HWKGWNRT-------TEDLKSEQNGIETIARS 352 (636)
Q Consensus 285 lV~~s~~L~h~~~d~~~~L~el~RvLKPGG~Liis~p~~~w~~-----~~~~W~~t-------~e~l~~~~~~ie~la~~ 352 (636)
+|++..+++|+. ++..++.++.++|+|||+++++.|...... ....|... ........+++.++++.
T Consensus 96 ~v~~~~~l~~~~-~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 174 (230)
T 3cc8_A 96 CVIFGDVLEHLF-DPWAVIEKVKPYIKQNGVILASIPNVSHISVLAPLLAGNWTYTEYGLLDKTHIRFFTFNEMLRMFLK 174 (230)
T ss_dssp EEEEESCGGGSS-CHHHHHHHTGGGEEEEEEEEEEEECTTSHHHHHHHHTTCCCCBSSSTTBTTCCCCCCHHHHHHHHHH
T ss_pred EEEECChhhhcC-CHHHHHHHHHHHcCCCCEEEEEeCCcchHHHHHHHhcCCceeccCCCCCcceEEEecHHHHHHHHHH
Confidence 999999996664 789999999999999999999976432110 00111110 00011234567788888
Q ss_pred hceEeec
Q 006662 353 LCWKKLI 359 (636)
Q Consensus 353 l~Wk~v~ 359 (636)
.+|+.+.
T Consensus 175 ~Gf~~~~ 181 (230)
T 3cc8_A 175 AGYSISK 181 (230)
T ss_dssp TTEEEEE
T ss_pred cCCeEEE
Confidence 8887654
No 43
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.40 E-value=9.6e-13 Score=127.97 Aligned_cols=109 Identities=14% Similarity=0.117 Sum_probs=91.1
Q ss_pred HHHHHhhc-cCCCCCcEEEEeCCCCcHHHHHHhhcCCEEEEcCcCCchHHHHHHHHHcC-CCeEEEEeccccCCCCCCCe
Q 006662 206 DDIGKLIN-LKDGSIRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALERG-VPALIGVMASIRLPYPSRAF 283 (636)
Q Consensus 206 d~L~~lL~-l~~g~~r~VLDIGCGtG~~a~~La~~~v~vv~i~p~Dis~a~l~~A~erg-~~~~~~~~d~~~Lpf~~~sF 283 (636)
..+.+.+. ..++. +|||||||+|.++..+++++..++++ |+++.+++.+++.+ .++.+...|...+ +++++|
T Consensus 35 ~~~~~~l~~~~~~~--~vLdiG~G~G~~~~~l~~~~~~v~~~---D~s~~~~~~a~~~~~~~~~~~~~d~~~~-~~~~~~ 108 (218)
T 3ou2_A 35 PAALERLRAGNIRG--DVLELASGTGYWTRHLSGLADRVTAL---DGSAEMIAEAGRHGLDNVEFRQQDLFDW-TPDRQW 108 (218)
T ss_dssp HHHHHHHTTTTSCS--EEEEESCTTSHHHHHHHHHSSEEEEE---ESCHHHHHHHGGGCCTTEEEEECCTTSC-CCSSCE
T ss_pred HHHHHHHhcCCCCC--eEEEECCCCCHHHHHHHhcCCeEEEE---eCCHHHHHHHHhcCCCCeEEEecccccC-CCCCce
Confidence 34444444 33333 99999999999999999998877777 99999999998876 5688999998887 788999
Q ss_pred eEEEecccccccccCh--HHHHHHHHhcccCCcEEEEEeC
Q 006662 284 DMAHCSRCLIPWGQYD--GLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 284 DlV~~s~~L~h~~~d~--~~~L~el~RvLKPGG~Liis~p 321 (636)
|+|+++.+++|+. ++ ..+++++.++|||||.+++..+
T Consensus 109 D~v~~~~~l~~~~-~~~~~~~l~~~~~~L~pgG~l~~~~~ 147 (218)
T 3ou2_A 109 DAVFFAHWLAHVP-DDRFEAFWESVRSAVAPGGVVEFVDV 147 (218)
T ss_dssp EEEEEESCGGGSC-HHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred eEEEEechhhcCC-HHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 9999999997765 44 7899999999999999999865
No 44
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.40 E-value=1e-12 Score=134.33 Aligned_cols=99 Identities=18% Similarity=0.071 Sum_probs=86.8
Q ss_pred CcEEEEeCCCCcHHHHHHhhcCCEEEEcCcCCchHHHHHHHHHc----C--CCeEEEEeccccCC-CCCCCeeEEEeccc
Q 006662 219 IRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALER----G--VPALIGVMASIRLP-YPSRAFDMAHCSRC 291 (636)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~~v~vv~i~p~Dis~a~l~~A~er----g--~~~~~~~~d~~~Lp-f~~~sFDlV~~s~~ 291 (636)
..+|||||||+|.++..+++.+..++++ |+++.+++.|+++ + ..+.+..+|...++ +++++||+|++..+
T Consensus 69 ~~~vLDiGcG~G~~~~~l~~~~~~v~gv---D~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~ 145 (285)
T 4htf_A 69 KLRVLDAGGGEGQTAIKMAERGHQVILC---DLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHAV 145 (285)
T ss_dssp CCEEEEETCTTCHHHHHHHHTTCEEEEE---ESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCEEEEEEESC
T ss_pred CCEEEEeCCcchHHHHHHHHCCCEEEEE---ECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCceEEEECch
Confidence 4589999999999999999998877777 8899999988765 3 34788889998887 78899999999999
Q ss_pred ccccccChHHHHHHHHhcccCCcEEEEEeC
Q 006662 292 LIPWGQYDGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 292 L~h~~~d~~~~L~el~RvLKPGG~Liis~p 321 (636)
++|+ +++..+++++.++|||||++++..+
T Consensus 146 l~~~-~~~~~~l~~~~~~LkpgG~l~~~~~ 174 (285)
T 4htf_A 146 LEWV-ADPRSVLQTLWSVLRPGGVLSLMFY 174 (285)
T ss_dssp GGGC-SCHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred hhcc-cCHHHHHHHHHHHcCCCeEEEEEEe
Confidence 9665 5889999999999999999999865
No 45
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.40 E-value=7.4e-14 Score=151.02 Aligned_cols=153 Identities=11% Similarity=0.104 Sum_probs=108.3
Q ss_pred HHHHHHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhcCCEEEEcCcCCchHHHHHHHHHcCCCeEE---EEeccccCC
Q 006662 201 ADAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALERGVPALI---GVMASIRLP 277 (636)
Q Consensus 201 ~~~~id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~~v~vv~i~p~Dis~a~l~~A~erg~~~~~---~~~d~~~Lp 277 (636)
...+.+.+.+.+...++. +|||||||+|.++..+++++..++++ |+++.+++.|++++.+... ...+...++
T Consensus 92 ~~~~~~~l~~~~~~~~~~--~VLDiGcG~G~~~~~l~~~g~~v~gv---D~s~~~~~~a~~~~~~~~~~~~~~~~~~~l~ 166 (416)
T 4e2x_A 92 FAMLARDFLATELTGPDP--FIVEIGCNDGIMLRTIQEAGVRHLGF---EPSSGVAAKAREKGIRVRTDFFEKATADDVR 166 (416)
T ss_dssp HHHHHHHHHHTTTCSSSC--EEEEETCTTTTTHHHHHHTTCEEEEE---CCCHHHHHHHHTTTCCEECSCCSHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCC--EEEEecCCCCHHHHHHHHcCCcEEEE---CCCHHHHHHHHHcCCCcceeeechhhHhhcc
Confidence 344556666666544444 99999999999999999998888888 9999999999988655432 223445566
Q ss_pred CCCCCeeEEEecccccccccChHHHHHHHHhcccCCcEEEEEeCCCCccccccCCCCc--hhhhHHHHHHHHHHHHHhce
Q 006662 278 YPSRAFDMAHCSRCLIPWGQYDGLYLIEVDRVLRPGGYWILSGPPVNWESHWKGWNRT--TEDLKSEQNGIETIARSLCW 355 (636)
Q Consensus 278 f~~~sFDlV~~s~~L~h~~~d~~~~L~el~RvLKPGG~Liis~p~~~w~~~~~~W~~t--~e~l~~~~~~ie~la~~l~W 355 (636)
+++++||+|++..+++|+. ++..+++++.|+|||||++++..+..........|... ........+.++.+++..+|
T Consensus 167 ~~~~~fD~I~~~~vl~h~~-d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~aGf 245 (416)
T 4e2x_A 167 RTEGPANVIYAANTLCHIP-YVQSVLEGVDALLAPDGVFVFEDPYLGDIVAKTSFDQIFDEHFFLFSATSVQGMAQRCGF 245 (416)
T ss_dssp HHHCCEEEEEEESCGGGCT-THHHHHHHHHHHEEEEEEEEEEEECHHHHHHHTCGGGCSTTCCEECCHHHHHHHHHHTTE
T ss_pred cCCCCEEEEEECChHHhcC-CHHHHHHHHHHHcCCCeEEEEEeCChHHhhhhcchhhhhhhhhhcCCHHHHHHHHHHcCC
Confidence 7789999999999997775 89999999999999999999987632110000000000 00011234567888888998
Q ss_pred Eeec
Q 006662 356 KKLI 359 (636)
Q Consensus 356 k~v~ 359 (636)
+.+.
T Consensus 246 ~~~~ 249 (416)
T 4e2x_A 246 ELVD 249 (416)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7654
No 46
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.40 E-value=1.5e-12 Score=126.77 Aligned_cols=97 Identities=25% Similarity=0.304 Sum_probs=85.0
Q ss_pred CCcEEEEeCCCCcHHHHHHhhcCC-EEEEcCcCCchHHHHHHHHHcCCCeEEEEeccccCCCCCCCeeEEEecccccccc
Q 006662 218 SIRTAIDTGCGVASWGAYLMSRNI-LAVSFAPRDTHEAQVQFALERGVPALIGVMASIRLPYPSRAFDMAHCSRCLIPWG 296 (636)
Q Consensus 218 ~~r~VLDIGCGtG~~a~~La~~~v-~vv~i~p~Dis~a~l~~A~erg~~~~~~~~d~~~Lpf~~~sFDlV~~s~~L~h~~ 296 (636)
...+|||||||+|.++..+ +. .++++ |+++.+++.++++...+.+...+...+|+++++||+|++..+++|+
T Consensus 36 ~~~~vLdiG~G~G~~~~~l---~~~~v~~v---D~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~- 108 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL---PYPQKVGV---EPSEAMLAVGRRRAPEATWVRAWGEALPFPGESFDVVLLFTTLEFV- 108 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC---CCSEEEEE---CCCHHHHHHHHHHCTTSEEECCCTTSCCSCSSCEEEEEEESCTTTC-
T ss_pred CCCeEEEECCCCCHhHHhC---CCCeEEEE---eCCHHHHHHHHHhCCCcEEEEcccccCCCCCCcEEEEEEcChhhhc-
Confidence 3449999999999999888 55 56666 8999999999888767788888998999999999999999999665
Q ss_pred cChHHHHHHHHhcccCCcEEEEEeC
Q 006662 297 QYDGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 297 ~d~~~~L~el~RvLKPGG~Liis~p 321 (636)
+++..+++++.++|||||.++++.+
T Consensus 109 ~~~~~~l~~~~~~L~pgG~l~i~~~ 133 (211)
T 2gs9_A 109 EDVERVLLEARRVLRPGGALVVGVL 133 (211)
T ss_dssp SCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHcCCCCEEEEEec
Confidence 4889999999999999999999976
No 47
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.39 E-value=1.2e-12 Score=127.75 Aligned_cols=110 Identities=12% Similarity=0.177 Sum_probs=88.8
Q ss_pred HHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhcCCEEEEcCcCCchHHHHHHHHHcC---CCeEEEEeccccCCCCCCC
Q 006662 206 DDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALERG---VPALIGVMASIRLPYPSRA 282 (636)
Q Consensus 206 d~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~~v~vv~i~p~Dis~a~l~~A~erg---~~~~~~~~d~~~Lpf~~~s 282 (636)
..+...+...+ ..+|||||||+|.++..+++.+..++++ |+++.+++.++++. .++.+...|...++ ++++
T Consensus 41 ~~l~~~~~~~~--~~~vLDiGcG~G~~~~~l~~~~~~v~~v---D~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~-~~~~ 114 (216)
T 3ofk_A 41 QLLRLSLSSGA--VSNGLEIGCAAGAFTEKLAPHCKRLTVI---DVMPRAIGRACQRTKRWSHISWAATDILQFS-TAEL 114 (216)
T ss_dssp HHHHHHTTTSS--EEEEEEECCTTSHHHHHHGGGEEEEEEE---ESCHHHHHHHHHHTTTCSSEEEEECCTTTCC-CSCC
T ss_pred HHHHHHcccCC--CCcEEEEcCCCCHHHHHHHHcCCEEEEE---ECCHHHHHHHHHhcccCCCeEEEEcchhhCC-CCCC
Confidence 33444443333 4489999999999999999987666666 99999999998764 35788999988888 6789
Q ss_pred eeEEEecccccccccCh---HHHHHHHHhcccCCcEEEEEeCC
Q 006662 283 FDMAHCSRCLIPWGQYD---GLYLIEVDRVLRPGGYWILSGPP 322 (636)
Q Consensus 283 FDlV~~s~~L~h~~~d~---~~~L~el~RvLKPGG~Liis~p~ 322 (636)
||+|+++.+++|+. ++ ..++.++.++|||||+++++.+.
T Consensus 115 fD~v~~~~~l~~~~-~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 156 (216)
T 3ofk_A 115 FDLIVVAEVLYYLE-DMTQMRTAIDNMVKMLAPGGHLVFGSAR 156 (216)
T ss_dssp EEEEEEESCGGGSS-SHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred ccEEEEccHHHhCC-CHHHHHHHHHHHHHHcCCCCEEEEEecC
Confidence 99999999996665 54 57899999999999999998763
No 48
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.39 E-value=2e-12 Score=132.07 Aligned_cols=112 Identities=16% Similarity=0.158 Sum_probs=90.0
Q ss_pred HHHHHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhh-cCCEEEEcCcCCchHHHHHHHHHc----C--CCeEEEEeccc
Q 006662 202 DAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMS-RNILAVSFAPRDTHEAQVQFALER----G--VPALIGVMASI 274 (636)
Q Consensus 202 ~~~id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~-~~v~vv~i~p~Dis~a~l~~A~er----g--~~~~~~~~d~~ 274 (636)
...++.+.+.+...++. +|||||||+|.++..+++ .+..++++ |+++.+++.++++ + ..+.+...|..
T Consensus 50 ~~~~~~~~~~~~~~~~~--~vLDiGcG~G~~~~~l~~~~~~~v~gv---d~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~ 124 (287)
T 1kpg_A 50 IAKIDLALGKLGLQPGM--TLLDVGCGWGATMMRAVEKYDVNVVGL---TLSKNQANHVQQLVANSENLRSKRVLLAGWE 124 (287)
T ss_dssp HHHHHHHHTTTTCCTTC--EEEEETCTTSHHHHHHHHHHCCEEEEE---ESCHHHHHHHHHHHHTCCCCSCEEEEESCGG
T ss_pred HHHHHHHHHHcCCCCcC--EEEEECCcccHHHHHHHHHcCCEEEEE---ECCHHHHHHHHHHHHhcCCCCCeEEEECChh
Confidence 34455566665555554 999999999999999995 47777777 8899999988765 2 25788888887
Q ss_pred cCCCCCCCeeEEEecccccccc-cChHHHHHHHHhcccCCcEEEEEeC
Q 006662 275 RLPYPSRAFDMAHCSRCLIPWG-QYDGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 275 ~Lpf~~~sFDlV~~s~~L~h~~-~d~~~~L~el~RvLKPGG~Liis~p 321 (636)
.+| ++||+|++..+++|+. .+...+++++.|+|||||++++..+
T Consensus 125 ~~~---~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 169 (287)
T 1kpg_A 125 QFD---EPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTI 169 (287)
T ss_dssp GCC---CCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred hCC---CCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 765 7899999999998875 3668999999999999999999865
No 49
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.38 E-value=2.7e-12 Score=130.30 Aligned_cols=99 Identities=21% Similarity=0.281 Sum_probs=85.9
Q ss_pred CcEEEEeCCCCcHHHHHHhhc--CCEEEEcCcCCchHHHHHHHHHc----C-CCeEEEEeccccCCCCCCCeeEEEeccc
Q 006662 219 IRTAIDTGCGVASWGAYLMSR--NILAVSFAPRDTHEAQVQFALER----G-VPALIGVMASIRLPYPSRAFDMAHCSRC 291 (636)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~--~v~vv~i~p~Dis~a~l~~A~er----g-~~~~~~~~d~~~Lpf~~~sFDlV~~s~~ 291 (636)
..+|||||||+|.++..+++. +..++++ |+++.+++.++++ + .++.+...|...+++++++||+|++..+
T Consensus 38 ~~~vLDiG~G~G~~~~~l~~~~~~~~v~~v---D~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 114 (276)
T 3mgg_A 38 GAKVLEAGCGIGAQTVILAKNNPDAEITSI---DISPESLEKARENTEKNGIKNVKFLQANIFSLPFEDSSFDHIFVCFV 114 (276)
T ss_dssp TCEEEETTCTTSHHHHHHHHHCTTSEEEEE---ESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCSCTTCEEEEEEESC
T ss_pred CCeEEEecCCCCHHHHHHHHhCCCCEEEEE---ECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCCCCCCeeEEEEech
Confidence 349999999999999999988 5677777 8899998888754 3 3588899999999999999999999999
Q ss_pred ccccccChHHHHHHHHhcccCCcEEEEEeC
Q 006662 292 LIPWGQYDGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 292 L~h~~~d~~~~L~el~RvLKPGG~Liis~p 321 (636)
++|+ +++..++.++.++|||||++++..+
T Consensus 115 l~~~-~~~~~~l~~~~~~L~pgG~l~~~~~ 143 (276)
T 3mgg_A 115 LEHL-QSPEEALKSLKKVLKPGGTITVIEG 143 (276)
T ss_dssp GGGC-SCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hhhc-CCHHHHHHHHHHHcCCCcEEEEEEc
Confidence 9665 5888999999999999999999875
No 50
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.38 E-value=1.9e-12 Score=133.49 Aligned_cols=111 Identities=14% Similarity=0.120 Sum_probs=91.3
Q ss_pred HHHHHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhh---cCCEEEEcCcCCchHHHHHHHHHc-------CCCeEEEEe
Q 006662 202 DAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMS---RNILAVSFAPRDTHEAQVQFALER-------GVPALIGVM 271 (636)
Q Consensus 202 ~~~id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~---~~v~vv~i~p~Dis~a~l~~A~er-------g~~~~~~~~ 271 (636)
..+.+.+.+++. . ...+|||||||+|.++..|++ .+..++++ |+++.+++.|+++ ..++.+.++
T Consensus 23 ~~~~~~l~~~~~-~--~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gv---D~s~~~~~~a~~~~~~~~~~~~~v~~~~~ 96 (299)
T 3g5t_A 23 SDFYKMIDEYHD-G--ERKLLVDVGCGPGTATLQMAQELKPFEQIIGS---DLSATMIKTAEVIKEGSPDTYKNVSFKIS 96 (299)
T ss_dssp HHHHHHHHHHCC-S--CCSEEEEETCTTTHHHHHHHHHSSCCSEEEEE---ESCHHHHHHHHHHHHHCC-CCTTEEEEEC
T ss_pred HHHHHHHHHHhc-C--CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEE---eCCHHHHHHHHHHHHhccCCCCceEEEEc
Confidence 445556665543 2 344999999999999999994 56677777 8999999988765 457899999
Q ss_pred ccccCCCCC------CCeeEEEecccccccccChHHHHHHHHhcccCCcEEEEEe
Q 006662 272 ASIRLPYPS------RAFDMAHCSRCLIPWGQYDGLYLIEVDRVLRPGGYWILSG 320 (636)
Q Consensus 272 d~~~Lpf~~------~sFDlV~~s~~L~h~~~d~~~~L~el~RvLKPGG~Liis~ 320 (636)
|...+++++ ++||+|+++.+++|+ ++..++.++.++|||||+|++..
T Consensus 97 d~~~~~~~~~~~~~~~~fD~V~~~~~l~~~--~~~~~l~~~~~~LkpgG~l~i~~ 149 (299)
T 3g5t_A 97 SSDDFKFLGADSVDKQKIDMITAVECAHWF--DFEKFQRSAYANLRKDGTIAIWG 149 (299)
T ss_dssp CTTCCGGGCTTTTTSSCEEEEEEESCGGGS--CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CHHhCCccccccccCCCeeEEeHhhHHHHh--CHHHHHHHHHHhcCCCcEEEEEe
Confidence 999988877 899999999999555 88999999999999999999953
No 51
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.38 E-value=5.6e-12 Score=119.66 Aligned_cols=118 Identities=12% Similarity=0.063 Sum_probs=90.6
Q ss_pred cccHHHHHHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhcCCEEEEcCcCCchHHHHHHHHHc----CCC---eEEEE
Q 006662 198 PRGADAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALER----GVP---ALIGV 270 (636)
Q Consensus 198 ~~g~~~~id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~~v~vv~i~p~Dis~a~l~~A~er----g~~---~~~~~ 270 (636)
+...+...+.+.+.+...++. +|||+|||+|.++..+++.+..++++ |+++.+++.++++ +.+ +.+..
T Consensus 34 ~~~~~~~~~~l~~~~~~~~~~--~vLdiG~G~G~~~~~~~~~~~~v~~~---D~~~~~~~~a~~~~~~~~~~~~~~~~~~ 108 (194)
T 1dus_A 34 YGKVDKGTKILVENVVVDKDD--DILDLGCGYGVIGIALADEVKSTTMA---DINRRAIKLAKENIKLNNLDNYDIRVVH 108 (194)
T ss_dssp TTSCCHHHHHHHHHCCCCTTC--EEEEETCTTSHHHHHHGGGSSEEEEE---ESCHHHHHHHHHHHHHTTCTTSCEEEEE
T ss_pred ccccchHHHHHHHHcccCCCC--eEEEeCCCCCHHHHHHHHcCCeEEEE---ECCHHHHHHHHHHHHHcCCCccceEEEE
Confidence 333334556677777655444 99999999999999999987766777 8898988888754 333 78888
Q ss_pred eccccCCCCCCCeeEEEecccccccccChHHHHHHHHhcccCCcEEEEEeC
Q 006662 271 MASIRLPYPSRAFDMAHCSRCLIPWGQYDGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 271 ~d~~~Lpf~~~sFDlV~~s~~L~h~~~d~~~~L~el~RvLKPGG~Liis~p 321 (636)
.|... ++++++||+|+++..+++...+...+++++.++|+|||.+++..+
T Consensus 109 ~d~~~-~~~~~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 158 (194)
T 1dus_A 109 SDLYE-NVKDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQ 158 (194)
T ss_dssp CSTTT-TCTTSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred Cchhc-ccccCCceEEEECCCcccchhHHHHHHHHHHHHcCCCCEEEEEEC
Confidence 77765 455778999999887743233457899999999999999999975
No 52
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.36 E-value=3e-12 Score=125.43 Aligned_cols=100 Identities=22% Similarity=0.286 Sum_probs=83.8
Q ss_pred CcEEEEeCCCCcHHHHHHhhcCCEEEEcCcCCchHHHHHHHHHc----CCCeEEEEeccccCCCCCCCeeEEEecccccc
Q 006662 219 IRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALER----GVPALIGVMASIRLPYPSRAFDMAHCSRCLIP 294 (636)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~~v~vv~i~p~Dis~a~l~~A~er----g~~~~~~~~d~~~Lpf~~~sFDlV~~s~~L~h 294 (636)
..+|||+|||+|.++..+++.+..++++ |+++.+++.++++ +..+.+...|...+++++++||+|+++.++++
T Consensus 39 ~~~vLDlG~G~G~~~~~l~~~~~~v~~v---D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~ 115 (227)
T 1ve3_A 39 RGKVLDLACGVGGFSFLLEDYGFEVVGV---DISEDMIRKAREYAKSRESNVEFIVGDARKLSFEDKTFDYVIFIDSIVH 115 (227)
T ss_dssp CCEEEEETCTTSHHHHHHHHTTCEEEEE---ESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCSCTTCEEEEEEESCGGG
T ss_pred CCeEEEEeccCCHHHHHHHHcCCEEEEE---ECCHHHHHHHHHHHHhcCCCceEEECchhcCCCCCCcEEEEEEcCchHh
Confidence 4499999999999999999987766666 8899998888754 36688899999888888889999999988432
Q ss_pred c-ccChHHHHHHHHhcccCCcEEEEEeC
Q 006662 295 W-GQYDGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 295 ~-~~d~~~~L~el~RvLKPGG~Liis~p 321 (636)
+ ..+...+++++.++|||||.+++..+
T Consensus 116 ~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 143 (227)
T 1ve3_A 116 FEPLELNQVFKEVRRVLKPSGKFIMYFT 143 (227)
T ss_dssp CCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHcCCCcEEEEEec
Confidence 2 23557899999999999999999865
No 53
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.35 E-value=5e-12 Score=122.17 Aligned_cols=97 Identities=18% Similarity=0.154 Sum_probs=82.5
Q ss_pred EEEEeCCCCcHHHHHHhhcCCEEEEcCcCCchHHHHHHHHHc----CCCeEEEEeccccCCCCCCCeeEEEecccccccc
Q 006662 221 TAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALER----GVPALIGVMASIRLPYPSRAFDMAHCSRCLIPWG 296 (636)
Q Consensus 221 ~VLDIGCGtG~~a~~La~~~v~vv~i~p~Dis~a~l~~A~er----g~~~~~~~~d~~~Lpf~~~sFDlV~~s~~L~h~~ 296 (636)
+|||||||+|.++..+++.+..++++ |+++.+++.++++ +..+.+...|...+++++++||+|+++.. |+.
T Consensus 32 ~vLdiGcG~G~~~~~l~~~~~~v~~v---D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~--~~~ 106 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASLGYEVTAV---DQSSVGLAKAKQLAQEKGVKITTVQSNLADFDIVADAWEGIVSIFC--HLP 106 (202)
T ss_dssp EEEECCCSCTHHHHHHHTTTCEEEEE---CSSHHHHHHHHHHHHHHTCCEEEECCBTTTBSCCTTTCSEEEEECC--CCC
T ss_pred CEEEECCCCCHhHHHHHhCCCeEEEE---ECCHHHHHHHHHHHHhcCCceEEEEcChhhcCCCcCCccEEEEEhh--cCC
Confidence 89999999999999999998877777 8899999888765 45788888898888888899999999643 443
Q ss_pred -cChHHHHHHHHhcccCCcEEEEEeCC
Q 006662 297 -QYDGLYLIEVDRVLRPGGYWILSGPP 322 (636)
Q Consensus 297 -~d~~~~L~el~RvLKPGG~Liis~p~ 322 (636)
.+...++.++.++|||||++++..+.
T Consensus 107 ~~~~~~~l~~~~~~L~pgG~l~~~~~~ 133 (202)
T 2kw5_A 107 SSLRQQLYPKVYQGLKPGGVFILEGFA 133 (202)
T ss_dssp HHHHHHHHHHHHTTCCSSEEEEEEEEC
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 34588999999999999999999753
No 54
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.35 E-value=4.5e-12 Score=124.43 Aligned_cols=100 Identities=24% Similarity=0.296 Sum_probs=86.4
Q ss_pred cEEEEeCCCCcHHHHHHhhcCCEEEEcCcCCchHHHHHHHHHcCC----------CeEEEEeccccCCCCCCCeeEEEec
Q 006662 220 RTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALERGV----------PALIGVMASIRLPYPSRAFDMAHCS 289 (636)
Q Consensus 220 r~VLDIGCGtG~~a~~La~~~v~vv~i~p~Dis~a~l~~A~erg~----------~~~~~~~d~~~Lpf~~~sFDlV~~s 289 (636)
.+|||+|||+|.++..+++.+..++++ |+++.+++.++++.. .+.+...+...+++++++||+|++.
T Consensus 32 ~~vLdiG~G~G~~~~~l~~~~~~v~~v---D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~ 108 (235)
T 3sm3_A 32 DEILDIGCGSGKISLELASKGYSVTGI---DINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAVMQ 108 (235)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCEEEEE---ESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEEEE
T ss_pred CeEEEECCCCCHHHHHHHhCCCeEEEE---ECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEEEc
Confidence 389999999999999999998877777 999999999987532 3678888998999989999999999
Q ss_pred ccccccccChH---HHHHHHHhcccCCcEEEEEeCCC
Q 006662 290 RCLIPWGQYDG---LYLIEVDRVLRPGGYWILSGPPV 323 (636)
Q Consensus 290 ~~L~h~~~d~~---~~L~el~RvLKPGG~Liis~p~~ 323 (636)
.+++|+. ++. .+++++.++|||||++++..+..
T Consensus 109 ~~l~~~~-~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 144 (235)
T 3sm3_A 109 AFLTSVP-DPKERSRIIKEVFRVLKPGAYLYLVEFGQ 144 (235)
T ss_dssp SCGGGCC-CHHHHHHHHHHHHHHEEEEEEEEEEEEBC
T ss_pred chhhcCC-CHHHHHHHHHHHHHHcCCCeEEEEEECCc
Confidence 9996664 665 89999999999999999987643
No 55
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.34 E-value=5.8e-12 Score=130.08 Aligned_cols=112 Identities=13% Similarity=0.109 Sum_probs=90.3
Q ss_pred HHHHHHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhc-CCEEEEcCcCCchHHHHHHHHHc----CC--CeEEEEecc
Q 006662 201 ADAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR-NILAVSFAPRDTHEAQVQFALER----GV--PALIGVMAS 273 (636)
Q Consensus 201 ~~~~id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~-~v~vv~i~p~Dis~a~l~~A~er----g~--~~~~~~~d~ 273 (636)
....++.+.+.+...++. +|||||||+|.++..++++ +..++++ |+++.+++.|+++ +. .+.+...|.
T Consensus 57 ~~~~~~~~~~~~~~~~~~--~vLDiGcG~G~~~~~la~~~~~~v~gv---D~s~~~~~~a~~~~~~~~~~~~v~~~~~d~ 131 (302)
T 3hem_A 57 QYAKRKLALDKLNLEPGM--TLLDIGCGWGSTMRHAVAEYDVNVIGL---TLSENQYAHDKAMFDEVDSPRRKEVRIQGW 131 (302)
T ss_dssp HHHHHHHHHHTTCCCTTC--EEEEETCTTSHHHHHHHHHHCCEEEEE---ECCHHHHHHHHHHHHHSCCSSCEEEEECCG
T ss_pred HHHHHHHHHHHcCCCCcC--EEEEeeccCcHHHHHHHHhCCCEEEEE---ECCHHHHHHHHHHHHhcCCCCceEEEECCH
Confidence 344555566666555555 9999999999999999998 7777777 9999999988765 33 477888887
Q ss_pred ccCCCCCCCeeEEEecccccccccCh---------HHHHHHHHhcccCCcEEEEEeC
Q 006662 274 IRLPYPSRAFDMAHCSRCLIPWGQYD---------GLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 274 ~~Lpf~~~sFDlV~~s~~L~h~~~d~---------~~~L~el~RvLKPGG~Liis~p 321 (636)
..+ +++||+|++..+++|+. ++ ..+++++.++|||||++++...
T Consensus 132 ~~~---~~~fD~v~~~~~~~~~~-d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 184 (302)
T 3hem_A 132 EEF---DEPVDRIVSLGAFEHFA-DGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTI 184 (302)
T ss_dssp GGC---CCCCSEEEEESCGGGTT-CCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEE
T ss_pred HHc---CCCccEEEEcchHHhcC-ccccccchhHHHHHHHHHHHhcCCCcEEEEEEE
Confidence 765 68999999999997774 32 7899999999999999999864
No 56
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.34 E-value=1.3e-11 Score=127.91 Aligned_cols=97 Identities=16% Similarity=0.070 Sum_probs=80.8
Q ss_pred cEEEEeCCCCcHHHHHHhh--c-CCEEEEcCcCCchHHHHHHHHHcCC----C--eEEEEeccccCCCCCCCeeEEEecc
Q 006662 220 RTAIDTGCGVASWGAYLMS--R-NILAVSFAPRDTHEAQVQFALERGV----P--ALIGVMASIRLPYPSRAFDMAHCSR 290 (636)
Q Consensus 220 r~VLDIGCGtG~~a~~La~--~-~v~vv~i~p~Dis~a~l~~A~erg~----~--~~~~~~d~~~Lpf~~~sFDlV~~s~ 290 (636)
.+|||||||+|.++..++. . +..++++ |+++.+++.|+++.. . +.+..+|...++++ ++||+|+++.
T Consensus 120 ~~vLDiGcG~G~~~~~la~~~~~~~~v~gv---D~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~ 195 (305)
T 3ocj_A 120 CVVASVPCGWMSELLALDYSACPGVQLVGI---DYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTR-EGYDLLTSNG 195 (305)
T ss_dssp CEEEETTCTTCHHHHTSCCTTCTTCEEEEE---ESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCC-SCEEEEECCS
T ss_pred CEEEEecCCCCHHHHHHHHhcCCCCeEEEE---ECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCcc-CCeEEEEECC
Confidence 4899999999999999952 2 5566677 889999999886532 2 88999999999988 9999999999
Q ss_pred cccccccChH---HHHHHHHhcccCCcEEEEEeC
Q 006662 291 CLIPWGQYDG---LYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 291 ~L~h~~~d~~---~~L~el~RvLKPGG~Liis~p 321 (636)
+++|+. ++. .+++++.++|||||+++++..
T Consensus 196 ~~~~~~-~~~~~~~~l~~~~~~LkpgG~l~i~~~ 228 (305)
T 3ocj_A 196 LNIYEP-DDARVTELYRRFWQALKPGGALVTSFL 228 (305)
T ss_dssp SGGGCC-CHHHHHHHHHHHHHHEEEEEEEEEECC
T ss_pred hhhhcC-CHHHHHHHHHHHHHhcCCCeEEEEEec
Confidence 996665 554 489999999999999999863
No 57
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.33 E-value=8.2e-12 Score=119.13 Aligned_cols=99 Identities=16% Similarity=0.109 Sum_probs=75.8
Q ss_pred cEEEEeCCCCcHHHHHHhhcCCEEEEcCcCCchHHHHHHHHHc----C-CCeEEEEeccccCC-CCCCCeeEEEeccccc
Q 006662 220 RTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALER----G-VPALIGVMASIRLP-YPSRAFDMAHCSRCLI 293 (636)
Q Consensus 220 r~VLDIGCGtG~~a~~La~~~v~vv~i~p~Dis~a~l~~A~er----g-~~~~~~~~d~~~Lp-f~~~sFDlV~~s~~L~ 293 (636)
.+|||+|||+|.++..|++++..++++ |+++.+++.|+++ + .++.+...+...++ +.+++||+|+++....
T Consensus 24 ~~vLDiGcG~G~~~~~la~~~~~v~~v---D~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~~~~~~ 100 (185)
T 3mti_A 24 SIVVDATMGNGNDTAFLAGLSKKVYAF---DVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAAIFNLGYL 100 (185)
T ss_dssp CEEEESCCTTSHHHHHHHTTSSEEEEE---ESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEEEEEEEC--
T ss_pred CEEEEEcCCCCHHHHHHHHhCCEEEEE---ECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCEEEEeCCCC
Confidence 499999999999999999987777777 9999999888754 3 35777776666543 5578899999874332
Q ss_pred cc--------ccChHHHHHHHHhcccCCcEEEEEeC
Q 006662 294 PW--------GQYDGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 294 h~--------~~d~~~~L~el~RvLKPGG~Liis~p 321 (636)
+. ..+...++.++.++|||||++++...
T Consensus 101 ~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 136 (185)
T 3mti_A 101 PSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIY 136 (185)
T ss_dssp ---------CHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEe
Confidence 22 12235788999999999999999864
No 58
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.33 E-value=3.2e-12 Score=131.70 Aligned_cols=100 Identities=11% Similarity=0.017 Sum_probs=73.4
Q ss_pred CCcEEEEeCCCCcHHHHHH----hhc--CCE--EEEcCcCCchHHHHHHHHHc-----CC-CeEE--EEeccccCC----
Q 006662 218 SIRTAIDTGCGVASWGAYL----MSR--NIL--AVSFAPRDTHEAQVQFALER-----GV-PALI--GVMASIRLP---- 277 (636)
Q Consensus 218 ~~r~VLDIGCGtG~~a~~L----a~~--~v~--vv~i~p~Dis~a~l~~A~er-----g~-~~~~--~~~d~~~Lp---- 277 (636)
...+|||||||+|.++..+ +.+ ++. ++++ |+|+.|++.|+++ +. ++.+ ...+...++
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~v---D~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 128 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVV---EPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRML 128 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEE---CSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHH
T ss_pred CCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEE---eCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhc
Confidence 3458999999999766543 332 442 2555 8899999988765 22 2333 344444433
Q ss_pred --CCCCCeeEEEecccccccccChHHHHHHHHhcccCCcEEEEEeC
Q 006662 278 --YPSRAFDMAHCSRCLIPWGQYDGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 278 --f~~~sFDlV~~s~~L~h~~~d~~~~L~el~RvLKPGG~Liis~p 321 (636)
+++++||+|+++.+++| .+++..+|+++.|+|||||+|++..+
T Consensus 129 ~~~~~~~fD~V~~~~~l~~-~~d~~~~l~~~~r~LkpgG~l~i~~~ 173 (292)
T 2aot_A 129 EKKELQKWDFIHMIQMLYY-VKDIPATLKFFHSLLGTNAKMLIIVV 173 (292)
T ss_dssp TTTCCCCEEEEEEESCGGG-CSCHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred cccCCCceeEEEEeeeeee-cCCHHHHHHHHHHHcCCCcEEEEEEe
Confidence 56889999999999955 46899999999999999999999854
No 59
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.32 E-value=8.3e-12 Score=128.07 Aligned_cols=113 Identities=19% Similarity=0.231 Sum_probs=91.0
Q ss_pred HHHHHHHHhh-ccCCCCCcEEEEeCCCCcHHHHHHhhc---CCEEEEcCcCCchHHHHHHHHHc----CCCeEEEEeccc
Q 006662 203 AYIDDIGKLI-NLKDGSIRTAIDTGCGVASWGAYLMSR---NILAVSFAPRDTHEAQVQFALER----GVPALIGVMASI 274 (636)
Q Consensus 203 ~~id~L~~lL-~l~~g~~r~VLDIGCGtG~~a~~La~~---~v~vv~i~p~Dis~a~l~~A~er----g~~~~~~~~d~~ 274 (636)
.+++.+.+.+ ...++ .+|||||||+|.++..+++. +..++++ |+++.+++.|+++ +.++.+.+.|..
T Consensus 8 ~~~~~~~~~~~~~~~~--~~vLDiGcG~G~~~~~l~~~~~~~~~v~gv---D~s~~~~~~a~~~~~~~~~~v~~~~~d~~ 82 (284)
T 3gu3_A 8 DYVSFLVNTVWKITKP--VHIVDYGCGYGYLGLVLMPLLPEGSKYTGI---DSGETLLAEARELFRLLPYDSEFLEGDAT 82 (284)
T ss_dssp HHHHHHHHTTSCCCSC--CEEEEETCTTTHHHHHHTTTSCTTCEEEEE---ESCHHHHHHHHHHHHSSSSEEEEEESCTT
T ss_pred HHHHHHHHHHhccCCC--CeEEEecCCCCHHHHHHHHhCCCCCEEEEE---ECCHHHHHHHHHHHHhcCCceEEEEcchh
Confidence 3444555444 33333 49999999999999999987 4667777 8899999888765 336888999998
Q ss_pred cCCCCCCCeeEEEecccccccccChHHHHHHHHhcccCCcEEEEEeCC
Q 006662 275 RLPYPSRAFDMAHCSRCLIPWGQYDGLYLIEVDRVLRPGGYWILSGPP 322 (636)
Q Consensus 275 ~Lpf~~~sFDlV~~s~~L~h~~~d~~~~L~el~RvLKPGG~Liis~p~ 322 (636)
.++++ ++||+|++..+++|+ +++..+++++.++|||||++++..+.
T Consensus 83 ~~~~~-~~fD~v~~~~~l~~~-~~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 83 EIELN-DKYDIAICHAFLLHM-TTPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp TCCCS-SCEEEEEEESCGGGC-SSHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred hcCcC-CCeeEEEECChhhcC-CCHHHHHHHHHHHcCCCCEEEEEecc
Confidence 88874 699999999999655 58899999999999999999999875
No 60
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.32 E-value=5.7e-12 Score=130.97 Aligned_cols=112 Identities=13% Similarity=0.146 Sum_probs=90.8
Q ss_pred HHHHHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhc-CCEEEEcCcCCchHHHHHHHHHc----CC--CeEEEEeccc
Q 006662 202 DAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR-NILAVSFAPRDTHEAQVQFALER----GV--PALIGVMASI 274 (636)
Q Consensus 202 ~~~id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~-~v~vv~i~p~Dis~a~l~~A~er----g~--~~~~~~~d~~ 274 (636)
...++.+.+.+...++. +|||||||+|.++..+++. +..++++ |+++.+++.|+++ +. .+.+...|..
T Consensus 76 ~~~~~~~~~~~~~~~~~--~vLDiGcG~G~~~~~la~~~~~~v~gv---D~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 150 (318)
T 2fk8_A 76 YAKVDLNLDKLDLKPGM--TLLDIGCGWGTTMRRAVERFDVNVIGL---TLSKNQHARCEQVLASIDTNRSRQVLLQGWE 150 (318)
T ss_dssp HHHHHHHHTTSCCCTTC--EEEEESCTTSHHHHHHHHHHCCEEEEE---ESCHHHHHHHHHHHHTSCCSSCEEEEESCGG
T ss_pred HHHHHHHHHhcCCCCcC--EEEEEcccchHHHHHHHHHCCCEEEEE---ECCHHHHHHHHHHHHhcCCCCceEEEECChH
Confidence 34455566655555554 9999999999999999988 7777777 8999999988765 32 4788888887
Q ss_pred cCCCCCCCeeEEEecccccccc-cChHHHHHHHHhcccCCcEEEEEeC
Q 006662 275 RLPYPSRAFDMAHCSRCLIPWG-QYDGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 275 ~Lpf~~~sFDlV~~s~~L~h~~-~d~~~~L~el~RvLKPGG~Liis~p 321 (636)
.+| ++||+|++..+++|+. ++...+++++.++|||||++++..+
T Consensus 151 ~~~---~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 195 (318)
T 2fk8_A 151 DFA---EPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSS 195 (318)
T ss_dssp GCC---CCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred HCC---CCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 765 7899999999997775 3668999999999999999999875
No 61
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.32 E-value=8.2e-12 Score=134.14 Aligned_cols=98 Identities=20% Similarity=0.161 Sum_probs=85.3
Q ss_pred cEEEEeCCCCcHHHHHHhhc---CCEEEEcCcCCchHHHHHHHHHc---------C----CCeEEEEeccccC------C
Q 006662 220 RTAIDTGCGVASWGAYLMSR---NILAVSFAPRDTHEAQVQFALER---------G----VPALIGVMASIRL------P 277 (636)
Q Consensus 220 r~VLDIGCGtG~~a~~La~~---~v~vv~i~p~Dis~a~l~~A~er---------g----~~~~~~~~d~~~L------p 277 (636)
.+|||||||+|.++..+++. +..++++ |+++.+++.|+++ | .++.+...|...+ +
T Consensus 85 ~~VLDlGcG~G~~~~~la~~~~~~~~v~gv---D~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~ 161 (383)
T 4fsd_A 85 ATVLDLGCGTGRDVYLASKLVGEHGKVIGV---DMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEG 161 (383)
T ss_dssp CEEEEESCTTSHHHHHHHHHHTTTCEEEEE---ECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCC
T ss_pred CEEEEecCccCHHHHHHHHHhCCCCEEEEE---ECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCC
Confidence 49999999999999999885 4566777 8899999999876 4 5789999998887 8
Q ss_pred CCCCCeeEEEecccccccccChHHHHHHHHhcccCCcEEEEEeC
Q 006662 278 YPSRAFDMAHCSRCLIPWGQYDGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 278 f~~~sFDlV~~s~~L~h~~~d~~~~L~el~RvLKPGG~Liis~p 321 (636)
+++++||+|+++.+++++ +++..+|+++.|+|||||+|+++.+
T Consensus 162 ~~~~~fD~V~~~~~l~~~-~d~~~~l~~~~r~LkpgG~l~i~~~ 204 (383)
T 4fsd_A 162 VPDSSVDIVISNCVCNLS-TNKLALFKEIHRVLRDGGELYFSDV 204 (383)
T ss_dssp CCTTCEEEEEEESCGGGC-SCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCCCEEEEEEccchhcC-CCHHHHHHHHHHHcCCCCEEEEEEe
Confidence 999999999999999554 5889999999999999999999864
No 62
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.32 E-value=4.9e-12 Score=122.50 Aligned_cols=99 Identities=16% Similarity=0.167 Sum_probs=82.5
Q ss_pred cEEEEeCCCCcHH-HHHHhhcCCEEEEcCcCCchHHHHHHHHHc----CCCeEEEEeccccCCCCCCCeeEEEecccccc
Q 006662 220 RTAIDTGCGVASW-GAYLMSRNILAVSFAPRDTHEAQVQFALER----GVPALIGVMASIRLPYPSRAFDMAHCSRCLIP 294 (636)
Q Consensus 220 r~VLDIGCGtG~~-a~~La~~~v~vv~i~p~Dis~a~l~~A~er----g~~~~~~~~d~~~Lpf~~~sFDlV~~s~~L~h 294 (636)
.+|||+|||+|.+ ...+++.+..++++ |+++.+++.++++ +..+.+...|...+++++++||+|++..+++|
T Consensus 25 ~~vLDiGcG~G~~~~~~~~~~~~~v~~v---D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 101 (209)
T 2p8j_A 25 KTVLDCGAGGDLPPLSIFVEDGYKTYGI---EISDLQLKKAENFSRENNFKLNISKGDIRKLPFKDESMSFVYSYGTIFH 101 (209)
T ss_dssp SEEEEESCCSSSCTHHHHHHTTCEEEEE---ECCHHHHHHHHHHHHHHTCCCCEEECCTTSCCSCTTCEEEEEECSCGGG
T ss_pred CEEEEECCCCCHHHHHHHHhCCCEEEEE---ECCHHHHHHHHHHHHhcCCceEEEECchhhCCCCCCceeEEEEcChHHh
Confidence 4899999999987 45556667777777 8899998887654 45678888899899998899999999999977
Q ss_pred cc-cChHHHHHHHHhcccCCcEEEEEeC
Q 006662 295 WG-QYDGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 295 ~~-~d~~~~L~el~RvLKPGG~Liis~p 321 (636)
+. .+...+++++.++|||||++++..+
T Consensus 102 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 129 (209)
T 2p8j_A 102 MRKNDVKEAIDEIKRVLKPGGLACINFL 129 (209)
T ss_dssp SCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 64 3458999999999999999999864
No 63
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.32 E-value=5.6e-12 Score=124.44 Aligned_cols=99 Identities=14% Similarity=0.094 Sum_probs=83.2
Q ss_pred CcEEEEeCCCCcHHHHHHhhcCCEEEEcCcCCchHHHHHHHHHcCCCeEEEEeccccCCCCCCCeeEEEecc-cccccc-
Q 006662 219 IRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALERGVPALIGVMASIRLPYPSRAFDMAHCSR-CLIPWG- 296 (636)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~~v~vv~i~p~Dis~a~l~~A~erg~~~~~~~~d~~~Lpf~~~sFDlV~~s~-~L~h~~- 296 (636)
..+|||||||+|.++..+++++..++++ |+++.+++.++++..++.+...|...+++ +++||+|+|.. +++|+.
T Consensus 41 ~~~vLdiG~G~G~~~~~l~~~~~~v~~~---D~s~~~~~~a~~~~~~~~~~~~d~~~~~~-~~~~D~v~~~~~~~~~~~~ 116 (239)
T 3bxo_A 41 ASSLLDVACGTGTHLEHFTKEFGDTAGL---ELSEDMLTHARKRLPDATLHQGDMRDFRL-GRKFSAVVSMFSSVGYLKT 116 (239)
T ss_dssp CCEEEEETCTTSHHHHHHHHHHSEEEEE---ESCHHHHHHHHHHCTTCEEEECCTTTCCC-SSCEEEEEECTTGGGGCCS
T ss_pred CCeEEEecccCCHHHHHHHHhCCcEEEE---eCCHHHHHHHHHhCCCCEEEECCHHHccc-CCCCcEEEEcCchHhhcCC
Confidence 3489999999999999999987666666 89999999999887778899999888887 67899999755 775553
Q ss_pred -cChHHHHHHHHhcccCCcEEEEEeC
Q 006662 297 -QYDGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 297 -~d~~~~L~el~RvLKPGG~Liis~p 321 (636)
.+...+++++.++|||||++++..+
T Consensus 117 ~~~~~~~l~~~~~~L~pgG~l~~~~~ 142 (239)
T 3bxo_A 117 TEELGAAVASFAEHLEPGGVVVVEPW 142 (239)
T ss_dssp HHHHHHHHHHHHHTEEEEEEEEECCC
T ss_pred HHHHHHHHHHHHHhcCCCeEEEEEec
Confidence 2337899999999999999999854
No 64
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.32 E-value=7.4e-12 Score=123.14 Aligned_cols=130 Identities=15% Similarity=0.180 Sum_probs=96.1
Q ss_pred cEEEEeCCCCcHHHHHHhhcCCEEEEcCcCCchHHHHHHHHHcCCCeEEEEeccccCCCCCCCeeEEEecccccccccCh
Q 006662 220 RTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALERGVPALIGVMASIRLPYPSRAFDMAHCSRCLIPWGQYD 299 (636)
Q Consensus 220 r~VLDIGCGtG~~a~~La~~~v~vv~i~p~Dis~a~l~~A~erg~~~~~~~~d~~~Lpf~~~sFDlV~~s~~L~h~~~d~ 299 (636)
.+|||||||+|.++..+++. +++ |+++.+++.++++ .+.+...+...+++++++||+|++..+++|+ +++
T Consensus 49 ~~vLDiG~G~G~~~~~l~~~----~~v---D~s~~~~~~a~~~--~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~-~~~ 118 (219)
T 1vlm_A 49 GRGVEIGVGTGRFAVPLKIK----IGV---EPSERMAEIARKR--GVFVLKGTAENLPLKDESFDFALMVTTICFV-DDP 118 (219)
T ss_dssp SCEEEETCTTSTTHHHHTCC----EEE---ESCHHHHHHHHHT--TCEEEECBTTBCCSCTTCEEEEEEESCGGGS-SCH
T ss_pred CcEEEeCCCCCHHHHHHHHH----hcc---CCCHHHHHHHHhc--CCEEEEcccccCCCCCCCeeEEEEcchHhhc-cCH
Confidence 48999999999999999887 344 7899999999887 5678888888889888999999999999665 588
Q ss_pred HHHHHHHHhcccCCcEEEEEeCCCCcc--ccc----cCCCCchhhhHHHHHHHHHHHHHhceEeec
Q 006662 300 GLYLIEVDRVLRPGGYWILSGPPVNWE--SHW----KGWNRTTEDLKSEQNGIETIARSLCWKKLI 359 (636)
Q Consensus 300 ~~~L~el~RvLKPGG~Liis~p~~~w~--~~~----~~W~~t~e~l~~~~~~ie~la~~l~Wk~v~ 359 (636)
..++.++.++|+|||++++..+...-. ... .+............+++.++++..+|+.+.
T Consensus 119 ~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~ 184 (219)
T 1vlm_A 119 ERALKEAYRILKKGGYLIVGIVDRESFLGREYEKNKEKSVFYKNARFFSTEELMDLMRKAGFEEFK 184 (219)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEECSSSHHHHHHHHTTTC-CCSTTCCCCCHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHcCCCcEEEEEEeCCccHHHHHHHHHhcCcchhcccccCCHHHHHHHHHHCCCeEEE
Confidence 999999999999999999987533210 000 000000000011345677888888887654
No 65
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.31 E-value=1.1e-11 Score=126.73 Aligned_cols=97 Identities=15% Similarity=0.218 Sum_probs=82.8
Q ss_pred cEEEEeCCCCcHHHHHHhhcCCEEEEcCcCCchHHHHHHHHHc----CCCeEEEEeccccCCCCCCCeeEEEeccccccc
Q 006662 220 RTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALER----GVPALIGVMASIRLPYPSRAFDMAHCSRCLIPW 295 (636)
Q Consensus 220 r~VLDIGCGtG~~a~~La~~~v~vv~i~p~Dis~a~l~~A~er----g~~~~~~~~d~~~Lpf~~~sFDlV~~s~~L~h~ 295 (636)
.+|||+|||+|.++..+++++..++++ |+++.+++.++++ +.++.+...|...+++ +++||+|+++.+++|+
T Consensus 122 ~~vLD~GcG~G~~~~~l~~~g~~v~~v---D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~-~~~fD~i~~~~~~~~~ 197 (286)
T 3m70_A 122 CKVLDLGCGQGRNSLYLSLLGYDVTSW---DHNENSIAFLNETKEKENLNISTALYDINAANI-QENYDFIVSTVVFMFL 197 (286)
T ss_dssp CEEEEESCTTCHHHHHHHHTTCEEEEE---ESCHHHHHHHHHHHHHTTCCEEEEECCGGGCCC-CSCEEEEEECSSGGGS
T ss_pred CcEEEECCCCCHHHHHHHHCCCeEEEE---ECCHHHHHHHHHHHHHcCCceEEEEeccccccc-cCCccEEEEccchhhC
Confidence 389999999999999999998877777 8899998887654 4578899999888877 7899999999999766
Q ss_pred ccC-hHHHHHHHHhcccCCcEEEEEe
Q 006662 296 GQY-DGLYLIEVDRVLRPGGYWILSG 320 (636)
Q Consensus 296 ~~d-~~~~L~el~RvLKPGG~Liis~ 320 (636)
... ...+++++.++|||||++++..
T Consensus 198 ~~~~~~~~l~~~~~~LkpgG~l~i~~ 223 (286)
T 3m70_A 198 NRERVPSIIKNMKEHTNVGGYNLIVA 223 (286)
T ss_dssp CGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 433 2689999999999999988864
No 66
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.31 E-value=5e-12 Score=122.37 Aligned_cols=113 Identities=21% Similarity=0.205 Sum_probs=89.4
Q ss_pred HHHHHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhcCC-EEEEcCcCCchHHHHHHHHHcC---CCeEEEEeccccCC
Q 006662 202 DAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNI-LAVSFAPRDTHEAQVQFALERG---VPALIGVMASIRLP 277 (636)
Q Consensus 202 ~~~id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~~v-~vv~i~p~Dis~a~l~~A~erg---~~~~~~~~d~~~Lp 277 (636)
..+.+.+.+.+ .++ .+|||+|||+|.++..+++.+. .++++ |+++.+++.++++. ..+.+...|...++
T Consensus 30 ~~~~~~l~~~~--~~~--~~vLdiGcG~G~~~~~l~~~~~~~v~~~---D~s~~~~~~a~~~~~~~~~i~~~~~d~~~~~ 102 (215)
T 2pxx_A 30 SSFRALLEPEL--RPE--DRILVLGCGNSALSYELFLGGFPNVTSV---DYSSVVVAAMQACYAHVPQLRWETMDVRKLD 102 (215)
T ss_dssp HHHHHHHGGGC--CTT--CCEEEETCTTCSHHHHHHHTTCCCEEEE---ESCHHHHHHHHHHTTTCTTCEEEECCTTSCC
T ss_pred HHHHHHHHHhc--CCC--CeEEEECCCCcHHHHHHHHcCCCcEEEE---eCCHHHHHHHHHhcccCCCcEEEEcchhcCC
Confidence 34444444443 333 4899999999999999999865 56666 88999999998764 35788889988888
Q ss_pred CCCCCeeEEEecccccccc--------------cChHHHHHHHHhcccCCcEEEEEeC
Q 006662 278 YPSRAFDMAHCSRCLIPWG--------------QYDGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 278 f~~~sFDlV~~s~~L~h~~--------------~d~~~~L~el~RvLKPGG~Liis~p 321 (636)
+++++||+|++..++++.. .+...++.++.++|||||.+++..+
T Consensus 103 ~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 160 (215)
T 2pxx_A 103 FPSASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTS 160 (215)
T ss_dssp SCSSCEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred CCCCcccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeC
Confidence 8889999999988775443 2347899999999999999999976
No 67
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.31 E-value=1.2e-11 Score=142.81 Aligned_cols=123 Identities=17% Similarity=0.153 Sum_probs=98.2
Q ss_pred CCCcccHHHHHHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhcC---CEEEEcCcCCchHHHHHHHHHc---------
Q 006662 195 TMFPRGADAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRN---ILAVSFAPRDTHEAQVQFALER--------- 262 (636)
Q Consensus 195 ~~f~~g~~~~id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~~---v~vv~i~p~Dis~a~l~~A~er--------- 262 (636)
.+.+.-....++.+.+.+...++. +|||||||+|.++..|++.+ ..++++ |+++.+++.|+++
T Consensus 700 tFsPPL~eqRle~LLelL~~~~g~--rVLDVGCGTG~lai~LAr~g~p~a~VtGV---DIS~emLe~AReRLa~~lnAkr 774 (950)
T 3htx_A 700 FFKPPLSKQRVEYALKHIRESSAS--TLVDFGCGSGSLLDSLLDYPTSLQTIIGV---DISPKGLARAAKMLHVKLNKEA 774 (950)
T ss_dssp CSSSCHHHHHHHHHHHHHHHSCCS--EEEEETCSSSHHHHHHTSSCCCCCEEEEE---ESCHHHHHHHHHHHHHHTTTTC
T ss_pred cCCchHHHHHHHHHHHHhcccCCC--EEEEECCCCCHHHHHHHHhCCCCCeEEEE---ECCHHHHHHHHHHhhhccchhh
Confidence 334444455666677777655554 99999999999999999986 677777 9999999999762
Q ss_pred -C-CCeEEEEeccccCCCCCCCeeEEEecccccccccCh-HHHHHHHHhcccCCcEEEEEeCCC
Q 006662 263 -G-VPALIGVMASIRLPYPSRAFDMAHCSRCLIPWGQYD-GLYLIEVDRVLRPGGYWILSGPPV 323 (636)
Q Consensus 263 -g-~~~~~~~~d~~~Lpf~~~sFDlV~~s~~L~h~~~d~-~~~L~el~RvLKPGG~Liis~p~~ 323 (636)
+ .++.+.++|...+++++++||+|++..+++|+.+.. ..+++++.|+|||| .++++.|..
T Consensus 775 ~gl~nVefiqGDa~dLp~~d~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN~ 837 (950)
T 3htx_A 775 CNVKSATLYDGSILEFDSRLHDVDIGTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPNY 837 (950)
T ss_dssp SSCSEEEEEESCTTSCCTTSCSCCEEEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECBG
T ss_pred cCCCceEEEECchHhCCcccCCeeEEEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEecCc
Confidence 2 358899999999999999999999999997776322 46899999999999 888887644
No 68
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.29 E-value=2.2e-11 Score=118.23 Aligned_cols=146 Identities=14% Similarity=0.037 Sum_probs=99.7
Q ss_pred ccHHHHHHHHHHhhc--cCCCCCcEEEEeCCCCcHHHHHHhhcCC-EEEEcCcCCchHHHHHHHHHc----CCC-eEEEE
Q 006662 199 RGADAYIDDIGKLIN--LKDGSIRTAIDTGCGVASWGAYLMSRNI-LAVSFAPRDTHEAQVQFALER----GVP-ALIGV 270 (636)
Q Consensus 199 ~g~~~~id~L~~lL~--l~~g~~r~VLDIGCGtG~~a~~La~~~v-~vv~i~p~Dis~a~l~~A~er----g~~-~~~~~ 270 (636)
.+.......+.+.+. ..++ .+|||+|||+|.++..+++.+. .++++ |+++.+++.|+++ +.. +.+..
T Consensus 41 ~~~~~~~~~~~~~l~~~~~~~--~~vLDiG~G~G~~~~~l~~~~~~~v~~v---D~s~~~~~~a~~~~~~~~~~~v~~~~ 115 (205)
T 3grz_A 41 TGNHQTTQLAMLGIERAMVKP--LTVADVGTGSGILAIAAHKLGAKSVLAT---DISDESMTAAEENAALNGIYDIALQK 115 (205)
T ss_dssp -CCHHHHHHHHHHHHHHCSSC--CEEEEETCTTSHHHHHHHHTTCSEEEEE---ESCHHHHHHHHHHHHHTTCCCCEEEE
T ss_pred CCCCccHHHHHHHHHHhccCC--CEEEEECCCCCHHHHHHHHCCCCEEEEE---ECCHHHHHHHHHHHHHcCCCceEEEe
Confidence 333444444555444 2333 4999999999999999998854 66666 8899999888754 433 77777
Q ss_pred eccccCCCCCCCeeEEEecccccccccChHHHHHHHHhcccCCcEEEEEeCCCCccccccCCCCchhhhHHHHHHHHHHH
Q 006662 271 MASIRLPYPSRAFDMAHCSRCLIPWGQYDGLYLIEVDRVLRPGGYWILSGPPVNWESHWKGWNRTTEDLKSEQNGIETIA 350 (636)
Q Consensus 271 ~d~~~Lpf~~~sFDlV~~s~~L~h~~~d~~~~L~el~RvLKPGG~Liis~p~~~w~~~~~~W~~t~e~l~~~~~~ie~la 350 (636)
.|... +.+++||+|+++..+++ ...+++++.++|||||+++++.... . ..+.+.+++
T Consensus 116 ~d~~~--~~~~~fD~i~~~~~~~~----~~~~l~~~~~~L~~gG~l~~~~~~~-------------~----~~~~~~~~~ 172 (205)
T 3grz_A 116 TSLLA--DVDGKFDLIVANILAEI----LLDLIPQLDSHLNEDGQVIFSGIDY-------------L----QLPKIEQAL 172 (205)
T ss_dssp SSTTT--TCCSCEEEEEEESCHHH----HHHHGGGSGGGEEEEEEEEEEEEEG-------------G----GHHHHHHHH
T ss_pred ccccc--cCCCCceEEEECCcHHH----HHHHHHHHHHhcCCCCEEEEEecCc-------------c----cHHHHHHHH
Confidence 77654 44689999999877633 3688999999999999999985411 0 133466777
Q ss_pred HHhceEeeccc--cc--EEEEeCCCC
Q 006662 351 RSLCWKKLIQK--KD--LAIWQKPTN 372 (636)
Q Consensus 351 ~~l~Wk~v~~~--~~--~aIWqKp~~ 372 (636)
+..+|+.+... ++ ..+.++|.+
T Consensus 173 ~~~Gf~~~~~~~~~~w~~~~~~~~~~ 198 (205)
T 3grz_A 173 AENSFQIDLKMRAGRWIGLAISRKHE 198 (205)
T ss_dssp HHTTEEEEEEEEETTEEEEEEEECC-
T ss_pred HHcCCceEEeeccCCEEEEEEecccc
Confidence 78888776422 22 345555554
No 69
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.28 E-value=8.7e-12 Score=127.81 Aligned_cols=111 Identities=14% Similarity=0.006 Sum_probs=85.4
Q ss_pred HHHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhcCCEEEEcCcCCchHHHHHHHHHcCCCeEEEEeccccCCC-----
Q 006662 204 YIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALERGVPALIGVMASIRLPY----- 278 (636)
Q Consensus 204 ~id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~~v~vv~i~p~Dis~a~l~~A~erg~~~~~~~~d~~~Lpf----- 278 (636)
.++.+.+.+...++. +|||||||+|.++..|++++..++++ |+++.|++.|+++.... +...+...++.
T Consensus 33 ~~~~il~~l~l~~g~--~VLDlGcGtG~~a~~La~~g~~V~gv---D~S~~ml~~Ar~~~~~~-~v~~~~~~~~~~~~~~ 106 (261)
T 3iv6_A 33 DRENDIFLENIVPGS--TVAVIGASTRFLIEKALERGASVTVF---DFSQRMCDDLAEALADR-CVTIDLLDITAEIPKE 106 (261)
T ss_dssp HHHHHHHTTTCCTTC--EEEEECTTCHHHHHHHHHTTCEEEEE---ESCHHHHHHHHHHTSSS-CCEEEECCTTSCCCGG
T ss_pred HHHHHHHhcCCCCcC--EEEEEeCcchHHHHHHHhcCCEEEEE---ECCHHHHHHHHHHHHhc-cceeeeeecccccccc
Confidence 345566666666555 99999999999999999998887777 99999999998775332 22233333333
Q ss_pred CCCCeeEEEecccccccccC-hHHHHHHHHhcccCCcEEEEEeC
Q 006662 279 PSRAFDMAHCSRCLIPWGQY-DGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 279 ~~~sFDlV~~s~~L~h~~~d-~~~~L~el~RvLKPGG~Liis~p 321 (636)
.+++||+|+++.+++|+..+ ...++.++.++| |||.++++.+
T Consensus 107 ~~~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~~ 149 (261)
T 3iv6_A 107 LAGHFDFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRASVK 149 (261)
T ss_dssp GTTCCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEEEE
T ss_pred cCCCccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEEec
Confidence 25789999999999777533 367999999999 9999999965
No 70
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.27 E-value=1.9e-11 Score=117.50 Aligned_cols=132 Identities=13% Similarity=0.099 Sum_probs=92.5
Q ss_pred CCceecCCCCCCCcccHHHHHHHHHHhhccC-CCCCcEEEEeCCCCcHHHHHHhhcCC-EEEEcCcCCchHHHHHHHHHc
Q 006662 185 GDRFSFPGGGTMFPRGADAYIDDIGKLINLK-DGSIRTAIDTGCGVASWGAYLMSRNI-LAVSFAPRDTHEAQVQFALER 262 (636)
Q Consensus 185 g~~~~F~ggg~~f~~g~~~~id~L~~lL~l~-~g~~r~VLDIGCGtG~~a~~La~~~v-~vv~i~p~Dis~a~l~~A~er 262 (636)
|..+..+. .. +....+...+.+.+.+... .....+|||+|||+|.++..+++++. .++++ |+++.+++.|+++
T Consensus 12 g~~l~~~~-~~-~rp~~~~~~~~l~~~l~~~~~~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~v---D~~~~~~~~a~~~ 86 (189)
T 3p9n_A 12 GRRIAVPP-RG-TRPTTDRVRESLFNIVTARRDLTGLAVLDLYAGSGALGLEALSRGAASVLFV---ESDQRSAAVIARN 86 (189)
T ss_dssp TCEEECCS-CC-C---CHHHHHHHHHHHHHHSCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEE---ECCHHHHHHHHHH
T ss_pred CcEecCCC-CC-CccCcHHHHHHHHHHHHhccCCCCCEEEEeCCCcCHHHHHHHHCCCCeEEEE---ECCHHHHHHHHHH
Confidence 33444544 22 2333455556666665431 12234899999999999998888754 56666 8899998888754
Q ss_pred ----CC-CeEEEEeccccCC--CCCCCeeEEEecccccccccChHHHHHHHHh--cccCCcEEEEEeC
Q 006662 263 ----GV-PALIGVMASIRLP--YPSRAFDMAHCSRCLIPWGQYDGLYLIEVDR--VLRPGGYWILSGP 321 (636)
Q Consensus 263 ----g~-~~~~~~~d~~~Lp--f~~~sFDlV~~s~~L~h~~~d~~~~L~el~R--vLKPGG~Liis~p 321 (636)
+. ++.+..+|...++ +++++||+|+++..+++..++...++.++.+ +|+|||++++..+
T Consensus 87 ~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~i~~~~p~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~ 154 (189)
T 3p9n_A 87 IEALGLSGATLRRGAVAAVVAAGTTSPVDLVLADPPYNVDSADVDAILAALGTNGWTREGTVAVVERA 154 (189)
T ss_dssp HHHHTCSCEEEEESCHHHHHHHCCSSCCSEEEECCCTTSCHHHHHHHHHHHHHSSSCCTTCEEEEEEE
T ss_pred HHHcCCCceEEEEccHHHHHhhccCCCccEEEECCCCCcchhhHHHHHHHHHhcCccCCCeEEEEEec
Confidence 33 5788888877654 4578999999988764433456889999999 9999999999865
No 71
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.27 E-value=4.8e-12 Score=128.67 Aligned_cols=148 Identities=11% Similarity=-0.047 Sum_probs=93.9
Q ss_pred HHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhcCC-EEEEcCcCCchHHHHHHHHHcC---C-----------------
Q 006662 206 DDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNI-LAVSFAPRDTHEAQVQFALERG---V----------------- 264 (636)
Q Consensus 206 d~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~~v-~vv~i~p~Dis~a~l~~A~erg---~----------------- 264 (636)
+.+.+++......+.+|||||||+|.++..++..+. .++++ |+|+.+++.|+++. .
T Consensus 43 ~~~~~~~~~~~~~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~---D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~ 119 (263)
T 2a14_A 43 ECLHKTFGPGGLQGDTLIDIGSGPTIYQVLAACDSFQDITLS---DFTDRNREELEKWLKKEPGAYDWTPAVKFACELEG 119 (263)
T ss_dssp HHHHHHHSTTSCCEEEEEESSCTTCCGGGTTGGGTEEEEEEE---ESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTT
T ss_pred HHHHHHhcCCCCCCceEEEeCCCccHHHHHHHHhhhcceeec---cccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCC
Confidence 344444432223345899999999988888777765 35555 88999988876431 0
Q ss_pred --------------Ce-EEEEecccc-CCC---CCCCeeEEEecccccccccC---hHHHHHHHHhcccCCcEEEEEeCC
Q 006662 265 --------------PA-LIGVMASIR-LPY---PSRAFDMAHCSRCLIPWGQY---DGLYLIEVDRVLRPGGYWILSGPP 322 (636)
Q Consensus 265 --------------~~-~~~~~d~~~-Lpf---~~~sFDlV~~s~~L~h~~~d---~~~~L~el~RvLKPGG~Liis~p~ 322 (636)
.+ .+..+|... .|+ ..++||+|+++.+++|...+ ...+++++.|+|||||+|++++..
T Consensus 120 ~~~~~~~~~~~~~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~ 199 (263)
T 2a14_A 120 NSGRWEEKEEKLRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTL 199 (263)
T ss_dssp CGGGHHHHHHHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEES
T ss_pred CCcchhhHHHHHHhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEee
Confidence 12 266777766 343 35789999999999765433 368999999999999999999641
Q ss_pred -CCccccccCCCCchhhhHHHHHHHHHHHHHhceEeec
Q 006662 323 -VNWESHWKGWNRTTEDLKSEQNGIETIARSLCWKKLI 359 (636)
Q Consensus 323 -~~w~~~~~~W~~t~e~l~~~~~~ie~la~~l~Wk~v~ 359 (636)
..+... .. ..........+++.++++..+++.+.
T Consensus 200 ~~~~~~~-g~--~~~~~~~~~~~~l~~~l~~aGF~i~~ 234 (263)
T 2a14_A 200 RLPSYMV-GK--REFSCVALEKGEVEQAVLDAGFDIEQ 234 (263)
T ss_dssp SCCEEEE-TT--EEEECCCCCHHHHHHHHHHTTEEEEE
T ss_pred cCcccee-CC--eEeeccccCHHHHHHHHHHCCCEEEE
Confidence 111100 00 00000111234567777777886543
No 72
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.26 E-value=9.9e-12 Score=123.78 Aligned_cols=113 Identities=13% Similarity=0.098 Sum_probs=84.9
Q ss_pred HHHHHHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhcCC-EEEEcCcCCchHHHHHHHHHcC----CCeEEEEecccc
Q 006662 201 ADAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNI-LAVSFAPRDTHEAQVQFALERG----VPALIGVMASIR 275 (636)
Q Consensus 201 ~~~~id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~~v-~vv~i~p~Dis~a~l~~A~erg----~~~~~~~~d~~~ 275 (636)
...+.+.+.+.+. .+ ..+|||||||+|.++..+++.+. .++++ |+++.+++.|+++. .++.+..++...
T Consensus 46 ~~~~~~~l~~~~~-~~--~~~vLDiGcGtG~~~~~l~~~~~~~v~gv---D~s~~~l~~a~~~~~~~~~~v~~~~~d~~~ 119 (236)
T 1zx0_A 46 ETPYMHALAAAAS-SK--GGRVLEVGFGMAIAASKVQEAPIDEHWII---ECNDGVFQRLRDWAPRQTHKVIPLKGLWED 119 (236)
T ss_dssp GHHHHHHHHHHHT-TT--CEEEEEECCTTSHHHHHHHTSCEEEEEEE---ECCHHHHHHHHHHGGGCSSEEEEEESCHHH
T ss_pred HHHHHHHHHhhcC-CC--CCeEEEEeccCCHHHHHHHhcCCCeEEEE---cCCHHHHHHHHHHHHhcCCCeEEEecCHHH
Confidence 3445555655542 23 34899999999999999988654 45555 99999999988653 457888888888
Q ss_pred C--CCCCCCeeEEEe-cccccccc----cChHHHHHHHHhcccCCcEEEEEe
Q 006662 276 L--PYPSRAFDMAHC-SRCLIPWG----QYDGLYLIEVDRVLRPGGYWILSG 320 (636)
Q Consensus 276 L--pf~~~sFDlV~~-s~~L~h~~----~d~~~~L~el~RvLKPGG~Liis~ 320 (636)
+ ++++++||+|++ .+.+ +.. .+...+++++.|+|||||+|++..
T Consensus 120 ~~~~~~~~~fD~V~~d~~~~-~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~ 170 (236)
T 1zx0_A 120 VAPTLPDGHFDGILYDTYPL-SEETWHTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp HGGGSCTTCEEEEEECCCCC-BGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred hhcccCCCceEEEEECCccc-chhhhhhhhHHHHHHHHHHhcCCCeEEEEEe
Confidence 7 899999999999 5554 221 112477999999999999999874
No 73
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.26 E-value=7.8e-12 Score=125.37 Aligned_cols=146 Identities=12% Similarity=0.058 Sum_probs=98.1
Q ss_pred HHHhhccCCCCCcEEEEeCCCCcHHHHHHhhcCC-EEEEcCcCCchHHHHHHHHHcCC--C-------------------
Q 006662 208 IGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNI-LAVSFAPRDTHEAQVQFALERGV--P------------------- 265 (636)
Q Consensus 208 L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~~v-~vv~i~p~Dis~a~l~~A~erg~--~------------------- 265 (636)
+.+++......+.+|||||||+|.++..+++.+. .++++ |+++.+++.++++.. +
T Consensus 46 l~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~gv---D~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (265)
T 2i62_A 46 LFKIFCLGAVKGELLIDIGSGPTIYQLLSACESFTEIIVS---DYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNR 122 (265)
T ss_dssp HHHHHHSSSCCEEEEEEESCTTCCGGGTTGGGTEEEEEEE---ESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTC
T ss_pred HHHHhcccccCCCEEEEECCCccHHHHHHhhcccCeEEEe---cCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccc
Confidence 3344433223345899999999999999998876 56666 889999998875521 1
Q ss_pred -------------e-EEEEeccccCC-CCC---CCeeEEEeccccccccc---ChHHHHHHHHhcccCCcEEEEEeCCC-
Q 006662 266 -------------A-LIGVMASIRLP-YPS---RAFDMAHCSRCLIPWGQ---YDGLYLIEVDRVLRPGGYWILSGPPV- 323 (636)
Q Consensus 266 -------------~-~~~~~d~~~Lp-f~~---~sFDlV~~s~~L~h~~~---d~~~~L~el~RvLKPGG~Liis~p~~- 323 (636)
+ .+..+|....+ +++ ++||+|+++.++++... +...++.++.++|||||+|++.....
T Consensus 123 ~~~~~~~~~l~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~ 202 (265)
T 2i62_A 123 MKGPEKEEKLRRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALKS 202 (265)
T ss_dssp SCHHHHHHHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSC
T ss_pred cchHHHHHHhhhhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCCC
Confidence 5 77888877654 355 89999999999964433 45789999999999999999987421
Q ss_pred CccccccCCCCchhhhHHHHHHHHHHHHHhceEeec
Q 006662 324 NWESHWKGWNRTTEDLKSEQNGIETIARSLCWKKLI 359 (636)
Q Consensus 324 ~w~~~~~~W~~t~e~l~~~~~~ie~la~~l~Wk~v~ 359 (636)
.+..... ..........+.+.++++..+|+.+.
T Consensus 203 ~~~~~~~---~~~~~~~~~~~~~~~~l~~aGf~~~~ 235 (265)
T 2i62_A 203 SYYMIGE---QKFSSLPLGWETVRDAVEEAGYTIEQ 235 (265)
T ss_dssp CEEEETT---EEEECCCCCHHHHHHHHHHTTCEEEE
T ss_pred ceEEcCC---ccccccccCHHHHHHHHHHCCCEEEE
Confidence 1110000 00000111234567778888887654
No 74
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.26 E-value=7.7e-12 Score=129.29 Aligned_cols=100 Identities=17% Similarity=0.151 Sum_probs=80.0
Q ss_pred CcEEEEeCCCCcHHHHHHhhc--CCEEEEcCcCCchHHHHHHHHHcC---------------------------------
Q 006662 219 IRTAIDTGCGVASWGAYLMSR--NILAVSFAPRDTHEAQVQFALERG--------------------------------- 263 (636)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~--~v~vv~i~p~Dis~a~l~~A~erg--------------------------------- 263 (636)
..+|||||||+|.++..|+++ +..++++ |+++.+++.|+++.
T Consensus 47 ~~~VLDiGCG~G~~~~~la~~~~~~~v~gv---Dis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (292)
T 3g07_A 47 GRDVLDLGCNVGHLTLSIACKWGPSRMVGL---DIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKR 123 (292)
T ss_dssp TSEEEEESCTTCHHHHHHHHHTCCSEEEEE---ESCHHHHHHHHHTC---------------------------------
T ss_pred CCcEEEeCCCCCHHHHHHHHHcCCCEEEEE---CCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccc
Confidence 459999999999999999997 5667777 99999999997652
Q ss_pred ------------------------------CCeEEEEeccccCC-----CCCCCeeEEEecccccccc---c--ChHHHH
Q 006662 264 ------------------------------VPALIGVMASIRLP-----YPSRAFDMAHCSRCLIPWG---Q--YDGLYL 303 (636)
Q Consensus 264 ------------------------------~~~~~~~~d~~~Lp-----f~~~sFDlV~~s~~L~h~~---~--d~~~~L 303 (636)
.++.+..+|....+ +.+++||+|+|..+++++. . +...++
T Consensus 124 ~~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l 203 (292)
T 3g07_A 124 SCFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMF 203 (292)
T ss_dssp ------------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHH
T ss_pred ccccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHH
Confidence 24677777765443 5678999999999884432 1 337899
Q ss_pred HHHHhcccCCcEEEEEeC
Q 006662 304 IEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 304 ~el~RvLKPGG~Liis~p 321 (636)
+++.++|||||+|++...
T Consensus 204 ~~~~~~LkpGG~lil~~~ 221 (292)
T 3g07_A 204 RRIYRHLRPGGILVLEPQ 221 (292)
T ss_dssp HHHHHHEEEEEEEEEECC
T ss_pred HHHHHHhCCCcEEEEecC
Confidence 999999999999999854
No 75
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.26 E-value=1.1e-11 Score=127.75 Aligned_cols=113 Identities=11% Similarity=0.031 Sum_probs=89.1
Q ss_pred HHHHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhcCCEEEEcCcCCchHHHHHHHHHcC--------CCeEEEEeccc
Q 006662 203 AYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALERG--------VPALIGVMASI 274 (636)
Q Consensus 203 ~~id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~~v~vv~i~p~Dis~a~l~~A~erg--------~~~~~~~~d~~ 274 (636)
.....+.+.+.... .+|||||||+|.++..|++++..++++ |+++.+++.|+++. .++.+.++|..
T Consensus 70 ~~~~~~~~~~~~~~---~~vLDlGcG~G~~~~~l~~~~~~v~gv---D~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~ 143 (299)
T 3g2m_A 70 SEAREFATRTGPVS---GPVLELAAGMGRLTFPFLDLGWEVTAL---ELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMS 143 (299)
T ss_dssp HHHHHHHHHHCCCC---SCEEEETCTTTTTHHHHHTTTCCEEEE---ESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTT
T ss_pred HHHHHHHHhhCCCC---CcEEEEeccCCHHHHHHHHcCCeEEEE---ECCHHHHHHHHHHHhhcccccccceEEEeCchh
Confidence 34455555554322 279999999999999999998777777 88999999887652 45889999999
Q ss_pred cCCCCCCCeeEEEecccccccccC--hHHHHHHHHhcccCCcEEEEEeCC
Q 006662 275 RLPYPSRAFDMAHCSRCLIPWGQY--DGLYLIEVDRVLRPGGYWILSGPP 322 (636)
Q Consensus 275 ~Lpf~~~sFDlV~~s~~L~h~~~d--~~~~L~el~RvLKPGG~Liis~p~ 322 (636)
.+++ +++||+|+|...+.++.+. ...+|+++.++|||||+|++..+.
T Consensus 144 ~~~~-~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 192 (299)
T 3g2m_A 144 AFAL-DKRFGTVVISSGSINELDEADRRGLYASVREHLEPGGKFLLSLAM 192 (299)
T ss_dssp BCCC-SCCEEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred cCCc-CCCcCEEEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEeec
Confidence 9887 6899999976554465532 378999999999999999999753
No 76
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.26 E-value=3.2e-11 Score=120.45 Aligned_cols=99 Identities=21% Similarity=0.291 Sum_probs=81.0
Q ss_pred CcEEEEeCCCCcHHHHHHhhcCCEEEEcCcCCchHHHHHHHHHc----CCCeEEEEeccccCCCCCCCeeEEEecccccc
Q 006662 219 IRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALER----GVPALIGVMASIRLPYPSRAFDMAHCSRCLIP 294 (636)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~~v~vv~i~p~Dis~a~l~~A~er----g~~~~~~~~d~~~Lpf~~~sFDlV~~s~~L~h 294 (636)
..+|||+|||+|.++..+++.+..++++ |+++.+++.|+++ +.++.+..+|...++++ ++||+|+|.....+
T Consensus 42 ~~~vLDlGcG~G~~~~~l~~~~~~v~gv---D~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~~~~~ 117 (252)
T 1wzn_A 42 VRRVLDLACGTGIPTLELAERGYEVVGL---DLHEEMLRVARRKAKERNLKIEFLQGDVLEIAFK-NEFDAVTMFFSTIM 117 (252)
T ss_dssp CCEEEEETCTTCHHHHHHHHTTCEEEEE---ESCHHHHHHHHHHHHHTTCCCEEEESCGGGCCCC-SCEEEEEECSSGGG
T ss_pred CCEEEEeCCCCCHHHHHHHHCCCeEEEE---ECCHHHHHHHHHHHHhcCCceEEEECChhhcccC-CCccEEEEcCCchh
Confidence 3499999999999999999998877777 8999999888754 45688889998888765 68999998754333
Q ss_pred cc--cChHHHHHHHHhcccCCcEEEEEeC
Q 006662 295 WG--QYDGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 295 ~~--~d~~~~L~el~RvLKPGG~Liis~p 321 (636)
+. .+...+++++.++|||||.+++..+
T Consensus 118 ~~~~~~~~~~l~~~~~~L~pgG~li~~~~ 146 (252)
T 1wzn_A 118 YFDEEDLRKLFSKVAEALKPGGVFITDFP 146 (252)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cCCHHHHHHHHHHHHHHcCCCeEEEEecc
Confidence 33 2337899999999999999999865
No 77
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.25 E-value=7.8e-12 Score=128.32 Aligned_cols=151 Identities=16% Similarity=0.057 Sum_probs=95.1
Q ss_pred HHHHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhc-CCEEEEcCcCCchHHHHHHHHHcCC-----------------
Q 006662 203 AYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR-NILAVSFAPRDTHEAQVQFALERGV----------------- 264 (636)
Q Consensus 203 ~~id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~-~v~vv~i~p~Dis~a~l~~A~erg~----------------- 264 (636)
...+.+.+.+......+.+|||||||+|.+...++.. +..++++ |+++.+++.|+++..
T Consensus 56 ~~~~~l~~~l~~~~~~~~~vLDiGcG~G~~~~l~~~~~~~~v~gv---D~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~ 132 (289)
T 2g72_A 56 WKLRCLAQTFATGEVSGRTLIDIGSGPTVYQLLSACSHFEDITMT---DFLEVNRQELGRWLQEEPGAFNWSMYSQHACL 132 (289)
T ss_dssp HHHHHHHHHHHTSCSCCSEEEEETCTTCCGGGTTGGGGCSEEEEE---CSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCCCeEEEECCCcChHHHHhhccCCCeEEEe---CCCHHHHHHHHHHHhhCcccccchhhhhHHHH
Confidence 3345555555433223459999999999955444442 5566777 899999988765311
Q ss_pred ------------------CeEEEEecccc-CCC-----CCCCeeEEEeccccccccc---ChHHHHHHHHhcccCCcEEE
Q 006662 265 ------------------PALIGVMASIR-LPY-----PSRAFDMAHCSRCLIPWGQ---YDGLYLIEVDRVLRPGGYWI 317 (636)
Q Consensus 265 ------------------~~~~~~~d~~~-Lpf-----~~~sFDlV~~s~~L~h~~~---d~~~~L~el~RvLKPGG~Li 317 (636)
...+..+|... +|+ ++++||+|+|+.++++... ++..+|+++.|+|||||+|+
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~ 212 (289)
T 2g72_A 133 IEGKGECWQDKERQLRARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLL 212 (289)
T ss_dssp HHCSCCCHHHHHHHHHHHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEE
T ss_pred hcCcccchhhhHHHHHhhhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEE
Confidence 02355557766 664 3467999999999966433 46899999999999999999
Q ss_pred EEeC-CCCccccccCCCCchhhhHHHHHHHHHHHHHhceEeec
Q 006662 318 LSGP-PVNWESHWKGWNRTTEDLKSEQNGIETIARSLCWKKLI 359 (636)
Q Consensus 318 is~p-~~~w~~~~~~W~~t~e~l~~~~~~ie~la~~l~Wk~v~ 359 (636)
+... ...|..... ..........+.+.++++..+|+.+.
T Consensus 213 ~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~l~~aGf~~~~ 252 (289)
T 2g72_A 213 LIGALEESWYLAGE---ARLTVVPVSEEEVREALVRSGYKVRD 252 (289)
T ss_dssp EEEEESCCEEEETT---EEEECCCCCHHHHHHHHHHTTEEEEE
T ss_pred EEEecCcceEEcCC---eeeeeccCCHHHHHHHHHHcCCeEEE
Confidence 9852 111111000 00000111234577778888887653
No 78
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.25 E-value=1.6e-10 Score=112.15 Aligned_cols=129 Identities=12% Similarity=-0.032 Sum_probs=95.5
Q ss_pred HHHHHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhcC--CEEEEcCcCCchHHHHHHHHHc----C-CCeEEEEeccc
Q 006662 202 DAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRN--ILAVSFAPRDTHEAQVQFALER----G-VPALIGVMASI 274 (636)
Q Consensus 202 ~~~id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~~--v~vv~i~p~Dis~a~l~~A~er----g-~~~~~~~~d~~ 274 (636)
+.....+.+.+...++. +|||+|||+|.++..+++.+ ..++++ |+++.+++.|+++ + ..+.+...|..
T Consensus 26 ~~i~~~~l~~l~~~~~~--~vLDiG~G~G~~~~~la~~~~~~~v~~v---D~s~~~~~~a~~~~~~~~~~~v~~~~~d~~ 100 (204)
T 3e05_A 26 QEVRAVTLSKLRLQDDL--VMWDIGAGSASVSIEASNLMPNGRIFAL---ERNPQYLGFIRDNLKKFVARNVTLVEAFAP 100 (204)
T ss_dssp HHHHHHHHHHTTCCTTC--EEEEETCTTCHHHHHHHHHCTTSEEEEE---ECCHHHHHHHHHHHHHHTCTTEEEEECCTT
T ss_pred HHHHHHHHHHcCCCCCC--EEEEECCCCCHHHHHHHHHCCCCEEEEE---eCCHHHHHHHHHHHHHhCCCcEEEEeCChh
Confidence 33434556666655555 99999999999999999986 666677 8899999888754 3 35778888875
Q ss_pred cCCCCCCCeeEEEecccccccccChHHHHHHHHhcccCCcEEEEEeCCCCccccccCCCCchhhhHHHHHHHHHHHHHhc
Q 006662 275 RLPYPSRAFDMAHCSRCLIPWGQYDGLYLIEVDRVLRPGGYWILSGPPVNWESHWKGWNRTTEDLKSEQNGIETIARSLC 354 (636)
Q Consensus 275 ~Lpf~~~sFDlV~~s~~L~h~~~d~~~~L~el~RvLKPGG~Liis~p~~~w~~~~~~W~~t~e~l~~~~~~ie~la~~l~ 354 (636)
......++||+|++...+. +...++.++.++|||||++++..+.. ...+.+.+.++..+
T Consensus 101 ~~~~~~~~~D~i~~~~~~~----~~~~~l~~~~~~LkpgG~l~~~~~~~-----------------~~~~~~~~~l~~~g 159 (204)
T 3e05_A 101 EGLDDLPDPDRVFIGGSGG----MLEEIIDAVDRRLKSEGVIVLNAVTL-----------------DTLTKAVEFLEDHG 159 (204)
T ss_dssp TTCTTSCCCSEEEESCCTT----CHHHHHHHHHHHCCTTCEEEEEECBH-----------------HHHHHHHHHHHHTT
T ss_pred hhhhcCCCCCEEEECCCCc----CHHHHHHHHHHhcCCCeEEEEEeccc-----------------ccHHHHHHHHHHCC
Confidence 5443447899999987662 66899999999999999999986511 12334556677778
Q ss_pred eE
Q 006662 355 WK 356 (636)
Q Consensus 355 Wk 356 (636)
|+
T Consensus 160 ~~ 161 (204)
T 3e05_A 160 YM 161 (204)
T ss_dssp CE
T ss_pred Cc
Confidence 73
No 79
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.24 E-value=1.7e-11 Score=127.96 Aligned_cols=100 Identities=10% Similarity=-0.034 Sum_probs=75.4
Q ss_pred CcEEEEeCCCCcHHHHHHhhc-CCEEEEcCcCCchHHHHHHHHHcC----CC-------eEEEEecc------ccC--CC
Q 006662 219 IRTAIDTGCGVASWGAYLMSR-NILAVSFAPRDTHEAQVQFALERG----VP-------ALIGVMAS------IRL--PY 278 (636)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~-~v~vv~i~p~Dis~a~l~~A~erg----~~-------~~~~~~d~------~~L--pf 278 (636)
+.+|||||||+|..+..++.. +..++++ |+|+.+++.|+++. .. +.+.+.+. ..+ ++
T Consensus 49 ~~~VLDlGCG~G~~l~~~~~~~~~~v~Gi---D~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~ 125 (302)
T 2vdw_A 49 KRKVLAIDFGNGADLEKYFYGEIALLVAT---DPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVF 125 (302)
T ss_dssp CCEEEETTCTTTTTHHHHHHTTCSEEEEE---ESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTC
T ss_pred CCeEEEEecCCcHhHHHHHhcCCCeEEEE---ECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccc
Confidence 358999999999766666555 4567777 99999999998652 21 34556655 323 46
Q ss_pred CCCCeeEEEecccccccc--cChHHHHHHHHhcccCCcEEEEEeC
Q 006662 279 PSRAFDMAHCSRCLIPWG--QYDGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 279 ~~~sFDlV~~s~~L~h~~--~d~~~~L~el~RvLKPGG~Liis~p 321 (636)
++++||+|+|..++++.. .+...+++++.|+|||||+|+++.+
T Consensus 126 ~~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~ 170 (302)
T 2vdw_A 126 YFGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTM 170 (302)
T ss_dssp CSSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cCCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 678999999999885432 2447999999999999999999976
No 80
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.23 E-value=6.1e-11 Score=115.77 Aligned_cols=119 Identities=19% Similarity=0.238 Sum_probs=88.2
Q ss_pred cEEEEeCCCCcHHHHHHhhcCCEEEEcCcCCchHHHHHHHHHcCCCeEEEEeccccCCCCCCCeeEEEecccccccccCh
Q 006662 220 RTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALERGVPALIGVMASIRLPYPSRAFDMAHCSRCLIPWGQYD 299 (636)
Q Consensus 220 r~VLDIGCGtG~~a~~La~~~v~vv~i~p~Dis~a~l~~A~erg~~~~~~~~d~~~Lpf~~~sFDlV~~s~~L~h~~~d~ 299 (636)
.+|||||||+|.++..++ ..+.++++++. .+.+..++...+++++++||+|++..++ |+ .++
T Consensus 69 ~~vLDiG~G~G~~~~~l~-~~v~~~D~s~~---------------~~~~~~~d~~~~~~~~~~fD~v~~~~~l-~~-~~~ 130 (215)
T 2zfu_A 69 LVVADFGCGDCRLASSIR-NPVHCFDLASL---------------DPRVTVCDMAQVPLEDESVDVAVFCLSL-MG-TNI 130 (215)
T ss_dssp SCEEEETCTTCHHHHHCC-SCEEEEESSCS---------------STTEEESCTTSCSCCTTCEEEEEEESCC-CS-SCH
T ss_pred CeEEEECCcCCHHHHHhh-ccEEEEeCCCC---------------CceEEEeccccCCCCCCCEeEEEEehhc-cc-cCH
Confidence 489999999999998885 34555555442 3456778888889989999999999999 54 688
Q ss_pred HHHHHHHHhcccCCcEEEEEeCCCCccccccCCCCchhhhHHHHHHHHHHHHHhceEeecccc-----cEEEEeCCC
Q 006662 300 GLYLIEVDRVLRPGGYWILSGPPVNWESHWKGWNRTTEDLKSEQNGIETIARSLCWKKLIQKK-----DLAIWQKPT 371 (636)
Q Consensus 300 ~~~L~el~RvLKPGG~Liis~p~~~w~~~~~~W~~t~e~l~~~~~~ie~la~~l~Wk~v~~~~-----~~aIWqKp~ 371 (636)
..++.++.++|+|||++++..+...+ . ..+.+.++++..+|+.+.... .+.+++|..
T Consensus 131 ~~~l~~~~~~L~~gG~l~i~~~~~~~--------~-------~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~~k~~ 192 (215)
T 2zfu_A 131 RDFLEEANRVLKPGGLLKVAEVSSRF--------E-------DVRTFLRAVTKLGFKIVSKDLTNSHFFLFDFQKTG 192 (215)
T ss_dssp HHHHHHHHHHEEEEEEEEEEECGGGC--------S-------CHHHHHHHHHHTTEEEEEEECCSTTCEEEEEEECS
T ss_pred HHHHHHHHHhCCCCeEEEEEEcCCCC--------C-------CHHHHHHHHHHCCCEEEEEecCCCeEEEEEEEecC
Confidence 99999999999999999998652211 0 234567788888998765321 245666654
No 81
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.22 E-value=2.2e-10 Score=112.30 Aligned_cols=107 Identities=9% Similarity=-0.044 Sum_probs=83.8
Q ss_pred HHHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhcCCEEEEcCcCCchHHHHHHHHHc----CC--CeEEEEeccccCC
Q 006662 204 YIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALER----GV--PALIGVMASIRLP 277 (636)
Q Consensus 204 ~id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~~v~vv~i~p~Dis~a~l~~A~er----g~--~~~~~~~d~~~Lp 277 (636)
....+.+.+...++. +|||+|||+|.++..+++++..++++ |+++.+++.|+++ +. .+.+...|.....
T Consensus 43 ~~~~~l~~l~~~~~~--~vLDlGcG~G~~~~~la~~~~~v~~v---D~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~ 117 (204)
T 3njr_A 43 MRALTLAALAPRRGE--LLWDIGGGSGSVSVEWCLAGGRAITI---EPRADRIENIQKNIDTYGLSPRMRAVQGTAPAAL 117 (204)
T ss_dssp HHHHHHHHHCCCTTC--EEEEETCTTCHHHHHHHHTTCEEEEE---ESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGG
T ss_pred HHHHHHHhcCCCCCC--EEEEecCCCCHHHHHHHHcCCEEEEE---eCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhc
Confidence 334455666555555 99999999999999999997777777 8899999888755 33 4788888877633
Q ss_pred CCCCCeeEEEecccccccccChHHHHHHHHhcccCCcEEEEEeC
Q 006662 278 YPSRAFDMAHCSRCLIPWGQYDGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 278 f~~~sFDlV~~s~~L~h~~~d~~~~L~el~RvLKPGG~Liis~p 321 (636)
.....||+|++...+ +.. ++.++.++|||||++++...
T Consensus 118 ~~~~~~D~v~~~~~~-----~~~-~l~~~~~~LkpgG~lv~~~~ 155 (204)
T 3njr_A 118 ADLPLPEAVFIGGGG-----SQA-LYDRLWEWLAPGTRIVANAV 155 (204)
T ss_dssp TTSCCCSEEEECSCC-----CHH-HHHHHHHHSCTTCEEEEEEC
T ss_pred ccCCCCCEEEECCcc-----cHH-HHHHHHHhcCCCcEEEEEec
Confidence 334579999987644 456 99999999999999999865
No 82
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.22 E-value=2.4e-11 Score=123.89 Aligned_cols=99 Identities=21% Similarity=0.258 Sum_probs=82.3
Q ss_pred cEEEEeCCCCcHHHHHHhhcCC-EEEEcCcCCchHHHHHHHHHcC----C--CeEEEEeccccCCC-CCCCeeEEEeccc
Q 006662 220 RTAIDTGCGVASWGAYLMSRNI-LAVSFAPRDTHEAQVQFALERG----V--PALIGVMASIRLPY-PSRAFDMAHCSRC 291 (636)
Q Consensus 220 r~VLDIGCGtG~~a~~La~~~v-~vv~i~p~Dis~a~l~~A~erg----~--~~~~~~~d~~~Lpf-~~~sFDlV~~s~~ 291 (636)
.+|||||||+|.++..+++.+. .++++ |+++.+++.|+++. . .+.+..+|...+++ ++++||+|++..+
T Consensus 66 ~~vLDiGcG~G~~~~~l~~~~~~~v~gv---D~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~ 142 (298)
T 1ri5_A 66 DSVLDLGCGKGGDLLKYERAGIGEYYGV---DIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQFS 142 (298)
T ss_dssp CEEEEETCTTTTTHHHHHHHTCSEEEEE---ESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEESC
T ss_pred CeEEEECCCCCHHHHHHHHCCCCEEEEE---ECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEECch
Confidence 4999999999999999988764 66677 88999998887652 2 36888889888888 6889999999999
Q ss_pred cccc---ccChHHHHHHHHhcccCCcEEEEEeC
Q 006662 292 LIPW---GQYDGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 292 L~h~---~~d~~~~L~el~RvLKPGG~Liis~p 321 (636)
+++. ..+...+++++.++|||||++++..+
T Consensus 143 l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 175 (298)
T 1ri5_A 143 FHYAFSTSESLDIAQRNIARHLRPGGYFIMTVP 175 (298)
T ss_dssp GGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred hhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 8552 23447899999999999999999976
No 83
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.22 E-value=1.7e-11 Score=121.42 Aligned_cols=88 Identities=13% Similarity=0.178 Sum_probs=78.7
Q ss_pred cEEEEeCCCCcHHHHHHhhcCCEEEEcCcCCchHHHHHHHHHcCCCeEEEEecc-ccCCCC-CCCeeEEEeccccccccc
Q 006662 220 RTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALERGVPALIGVMAS-IRLPYP-SRAFDMAHCSRCLIPWGQ 297 (636)
Q Consensus 220 r~VLDIGCGtG~~a~~La~~~v~vv~i~p~Dis~a~l~~A~erg~~~~~~~~d~-~~Lpf~-~~sFDlV~~s~~L~h~~~ 297 (636)
.+|||||||+|.++..+++.+..++++ |+++.+++.++++..++.+...|. ..+|++ +++||+|+++ .
T Consensus 50 ~~vLDiGcG~G~~~~~l~~~~~~v~~v---D~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~-------~ 119 (226)
T 3m33_A 50 TRVLEAGCGHGPDAARFGPQAARWAAY---DFSPELLKLARANAPHADVYEWNGKGELPAGLGAPFGLIVSR-------R 119 (226)
T ss_dssp CEEEEESCTTSHHHHHHGGGSSEEEEE---ESCHHHHHHHHHHCTTSEEEECCSCSSCCTTCCCCEEEEEEE-------S
T ss_pred CeEEEeCCCCCHHHHHHHHcCCEEEEE---ECCHHHHHHHHHhCCCceEEEcchhhccCCcCCCCEEEEEeC-------C
Confidence 489999999999999999998877777 999999999998877889999998 678888 8999999987 2
Q ss_pred ChHHHHHHHHhcccCCcEEE
Q 006662 298 YDGLYLIEVDRVLRPGGYWI 317 (636)
Q Consensus 298 d~~~~L~el~RvLKPGG~Li 317 (636)
++..++.++.++|||||.++
T Consensus 120 ~~~~~l~~~~~~LkpgG~l~ 139 (226)
T 3m33_A 120 GPTSVILRLPELAAPDAHFL 139 (226)
T ss_dssp CCSGGGGGHHHHEEEEEEEE
T ss_pred CHHHHHHHHHHHcCCCcEEE
Confidence 45678999999999999999
No 84
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.21 E-value=2.4e-11 Score=126.22 Aligned_cols=114 Identities=21% Similarity=0.250 Sum_probs=84.7
Q ss_pred HHHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhc-CCEEEEcCcCCchHHHHHHHHHcC------------CCeEEEE
Q 006662 204 YIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR-NILAVSFAPRDTHEAQVQFALERG------------VPALIGV 270 (636)
Q Consensus 204 ~id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~-~v~vv~i~p~Dis~a~l~~A~erg------------~~~~~~~ 270 (636)
.++.+.+.+........+|||||||+|.++..+++. ...++++ |+++.+++.|+++. ..+.+.+
T Consensus 20 l~~~~~~~l~~~~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~gv---D~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~ 96 (313)
T 3bgv_A 20 LIGEFLEKVRQKKKRDITVLDLGCGKGGDLLKWKKGRINKLVCT---DIADVSVKQCQQRYEDMKNRRDSEYIFSAEFIT 96 (313)
T ss_dssp HHHHHHHHHHHTC--CCEEEEETCTTTTTHHHHHHTTCSEEEEE---ESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEE
T ss_pred HHHHHHHHhhhccCCCCEEEEECCCCcHHHHHHHhcCCCEEEEE---eCCHHHHHHHHHHHHHhhhcccccccceEEEEE
Confidence 334444444332123348999999999999999876 4456666 88999998887542 2478888
Q ss_pred eccccCC----CC--CCCeeEEEecccccccc-cC---hHHHHHHHHhcccCCcEEEEEeC
Q 006662 271 MASIRLP----YP--SRAFDMAHCSRCLIPWG-QY---DGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 271 ~d~~~Lp----f~--~~sFDlV~~s~~L~h~~-~d---~~~~L~el~RvLKPGG~Liis~p 321 (636)
+|...++ ++ +++||+|+|+.++ ||. .+ ...++.++.++|||||+|+++.+
T Consensus 97 ~D~~~~~~~~~~~~~~~~fD~V~~~~~l-~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 156 (313)
T 3bgv_A 97 ADSSKELLIDKFRDPQMCFDICSCQFVC-HYSFESYEQADMMLRNACERLSPGGYFIGTTP 156 (313)
T ss_dssp CCTTTSCSTTTCSSTTCCEEEEEEETCG-GGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred ecccccchhhhcccCCCCEEEEEEecch-hhccCCHHHHHHHHHHHHHHhCCCcEEEEecC
Confidence 8888876 53 4599999999988 554 33 36899999999999999999976
No 85
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.21 E-value=1.7e-10 Score=108.53 Aligned_cols=109 Identities=17% Similarity=0.067 Sum_probs=80.7
Q ss_pred HHHHHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhc--CCEEEEcCcCCchHHHHHHHHHc----CC--CeEEEEecc
Q 006662 202 DAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR--NILAVSFAPRDTHEAQVQFALER----GV--PALIGVMAS 273 (636)
Q Consensus 202 ~~~id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~--~v~vv~i~p~Dis~a~l~~A~er----g~--~~~~~~~d~ 273 (636)
+.....+.+.+...++. +|||+|||+|.++..+++. +..++.+ |+++.+++.|+++ +. .+ +...+.
T Consensus 11 ~~~~~~~~~~~~~~~~~--~vldiG~G~G~~~~~l~~~~~~~~v~~v---D~~~~~~~~a~~~~~~~~~~~~~-~~~~d~ 84 (178)
T 3hm2_A 11 QHVRALAISALAPKPHE--TLWDIGGGSGSIAIEWLRSTPQTTAVCF---EISEERRERILSNAINLGVSDRI-AVQQGA 84 (178)
T ss_dssp HHHHHHHHHHHCCCTTE--EEEEESTTTTHHHHHHHTTSSSEEEEEE---CSCHHHHHHHHHHHHTTTCTTSE-EEECCT
T ss_pred HHHHHHHHHHhcccCCC--eEEEeCCCCCHHHHHHHHHCCCCeEEEE---eCCHHHHHHHHHHHHHhCCCCCE-EEecch
Confidence 33445566666555444 9999999999999999988 5556666 9999999988754 33 35 555554
Q ss_pred c-cCCCCCCCeeEEEecccccccccChHHHHHHHHhcccCCcEEEEEeC
Q 006662 274 I-RLPYPSRAFDMAHCSRCLIPWGQYDGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 274 ~-~Lpf~~~sFDlV~~s~~L~h~~~d~~~~L~el~RvLKPGG~Liis~p 321 (636)
. .++...++||+|++...+++ ..+++++.++|||||++++...
T Consensus 85 ~~~~~~~~~~~D~i~~~~~~~~-----~~~l~~~~~~L~~gG~l~~~~~ 128 (178)
T 3hm2_A 85 PRAFDDVPDNPDVIFIGGGLTA-----PGVFAAAWKRLPVGGRLVANAV 128 (178)
T ss_dssp TGGGGGCCSCCSEEEECC-TTC-----TTHHHHHHHTCCTTCEEEEEEC
T ss_pred HhhhhccCCCCCEEEECCcccH-----HHHHHHHHHhcCCCCEEEEEee
Confidence 2 33333388999999988844 5799999999999999999865
No 86
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.21 E-value=3.1e-11 Score=118.25 Aligned_cols=136 Identities=17% Similarity=0.149 Sum_probs=89.3
Q ss_pred cEEEEeCCCCcHHHHHHhhc--CCEEEEcCcCCchHHHHHH----HHH----cCC-CeEEEEeccccCCCCCCCeeEEEe
Q 006662 220 RTAIDTGCGVASWGAYLMSR--NILAVSFAPRDTHEAQVQF----ALE----RGV-PALIGVMASIRLPYPSRAFDMAHC 288 (636)
Q Consensus 220 r~VLDIGCGtG~~a~~La~~--~v~vv~i~p~Dis~a~l~~----A~e----rg~-~~~~~~~d~~~Lpf~~~sFDlV~~ 288 (636)
.+|||||||+|.++..|+++ +..++++ |+++.+++. |++ .+. ++.+.++|...+|+++++ |.|+.
T Consensus 29 ~~vLDiGcG~G~~~~~la~~~p~~~v~gv---D~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~-d~v~~ 104 (218)
T 3mq2_A 29 DVVLDVGTGDGKHPYKVARQNPSRLVVAL---DADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPLSGV-GELHV 104 (218)
T ss_dssp EEEEEESCTTCHHHHHHHHHCTTEEEEEE---ESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSCCCE-EEEEE
T ss_pred CEEEEecCCCCHHHHHHHHHCCCCEEEEE---ECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCCCCC-CEEEE
Confidence 38999999999999999998 5566666 777776553 221 232 688999999999988777 87774
Q ss_pred cccc---c-ccccChHHHHHHHHhcccCCcEEEEEeCCCCccccccCCCC-chhhhHHHHHHHHHHHHHhceEeec
Q 006662 289 SRCL---I-PWGQYDGLYLIEVDRVLRPGGYWILSGPPVNWESHWKGWNR-TTEDLKSEQNGIETIARSLCWKKLI 359 (636)
Q Consensus 289 s~~L---~-h~~~d~~~~L~el~RvLKPGG~Liis~p~~~w~~~~~~W~~-t~e~l~~~~~~ie~la~~l~Wk~v~ 359 (636)
.... + |+..++..+++++.|+|||||.++++.....|......... .........+.+..++...+|+...
T Consensus 105 ~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~i~~ 180 (218)
T 3mq2_A 105 LMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVALNLHAWRPSVPEVGEHPEPTPDSADEWLAPRYAEAGWKLAD 180 (218)
T ss_dssp ESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEEEGGGBTTBCGGGTTCCCCCHHHHHHHHHHHHHHTTEEEEE
T ss_pred EccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEeccccccccccccccCCccchHHHHHHHHHHHHHcCCCcee
Confidence 3322 1 23446689999999999999999997543333221110000 0011112233477788888887643
No 87
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.21 E-value=6.2e-11 Score=127.75 Aligned_cols=117 Identities=15% Similarity=0.081 Sum_probs=89.7
Q ss_pred HHHHHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhcCCEEEEcCcCCchHHHHHHHHHc----CCCeEEEEeccccCC
Q 006662 202 DAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALER----GVPALIGVMASIRLP 277 (636)
Q Consensus 202 ~~~id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~~v~vv~i~p~Dis~a~l~~A~er----g~~~~~~~~d~~~Lp 277 (636)
+.+.+.+.+.+........+|||+|||+|.++..+++++..++.+ |+++.+++.|+++ +..+.+...|....+
T Consensus 217 ~~ll~~l~~~l~~~~~~~~~VLDlGcG~G~~~~~la~~g~~V~gv---Dis~~al~~A~~n~~~~~~~v~~~~~D~~~~~ 293 (381)
T 3dmg_A 217 LLLLEALQERLGPEGVRGRQVLDLGAGYGALTLPLARMGAEVVGV---EDDLASVLSLQKGLEANALKAQALHSDVDEAL 293 (381)
T ss_dssp HHHHHHHHHHHCTTTTTTCEEEEETCTTSTTHHHHHHTTCEEEEE---ESBHHHHHHHHHHHHHTTCCCEEEECSTTTTS
T ss_pred HHHHHHHHHhhcccCCCCCEEEEEeeeCCHHHHHHHHcCCEEEEE---ECCHHHHHHHHHHHHHcCCCeEEEEcchhhcc
Confidence 334444444432112233489999999999999999998777777 8899999888754 456888888988887
Q ss_pred CCCCCeeEEEeccccccc----ccChHHHHHHHHhcccCCcEEEEEeC
Q 006662 278 YPSRAFDMAHCSRCLIPW----GQYDGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 278 f~~~sFDlV~~s~~L~h~----~~d~~~~L~el~RvLKPGG~Liis~p 321 (636)
.++++||+|+++..+++. ..+...++.++.++|||||.++++..
T Consensus 294 ~~~~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n 341 (381)
T 3dmg_A 294 TEEARFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVSN 341 (381)
T ss_dssp CTTCCEEEEEECCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ccCCCeEEEEECCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEEEc
Confidence 777899999999888441 22347899999999999999999965
No 88
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.21 E-value=8.3e-11 Score=116.31 Aligned_cols=111 Identities=17% Similarity=0.175 Sum_probs=87.6
Q ss_pred HHHHHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhcCCEEEEcCcCCchHHHHHHHHHc----CCCeEEEEeccccCC
Q 006662 202 DAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALER----GVPALIGVMASIRLP 277 (636)
Q Consensus 202 ~~~id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~~v~vv~i~p~Dis~a~l~~A~er----g~~~~~~~~d~~~Lp 277 (636)
....+.+.+.++ ++ .+|||+|||+|.++..+++. ..++++ |+++.+++.|+++ +..+.+...|...++
T Consensus 21 ~~~~~~~~~~~~--~~--~~vLdiG~G~G~~~~~l~~~-~~v~~v---D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~ 92 (243)
T 3d2l_A 21 PEWVAWVLEQVE--PG--KRIADIGCGTGTATLLLADH-YEVTGV---DLSEEMLEIAQEKAMETNRHVDFWVQDMRELE 92 (243)
T ss_dssp HHHHHHHHHHSC--TT--CEEEEESCTTCHHHHHHTTT-SEEEEE---ESCHHHHHHHHHHHHHTTCCCEEEECCGGGCC
T ss_pred HHHHHHHHHHcC--CC--CeEEEecCCCCHHHHHHhhC-CeEEEE---ECCHHHHHHHHHhhhhcCCceEEEEcChhhcC
Confidence 345555655543 33 48999999999999999988 666666 8899999888754 456788888988888
Q ss_pred CCCCCeeEEEecc-cccccc--cChHHHHHHHHhcccCCcEEEEEeC
Q 006662 278 YPSRAFDMAHCSR-CLIPWG--QYDGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 278 f~~~sFDlV~~s~-~L~h~~--~d~~~~L~el~RvLKPGG~Liis~p 321 (636)
++ ++||+|++.. +++|+. .+...+++++.++|||||.+++..+
T Consensus 93 ~~-~~fD~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 138 (243)
T 3d2l_A 93 LP-EPVDAITILCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFDVH 138 (243)
T ss_dssp CS-SCEEEEEECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CC-CCcCEEEEeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEEcC
Confidence 76 7899999986 776653 2337899999999999999999865
No 89
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.20 E-value=3.7e-11 Score=121.50 Aligned_cols=92 Identities=24% Similarity=0.391 Sum_probs=80.8
Q ss_pred CcEEEEeCCCCcHHHHHHhhc--CCEEEEcCcCCchHHHHHHHHHcCCCeEEEEeccccCCCCCCCeeEEEecccccccc
Q 006662 219 IRTAIDTGCGVASWGAYLMSR--NILAVSFAPRDTHEAQVQFALERGVPALIGVMASIRLPYPSRAFDMAHCSRCLIPWG 296 (636)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~--~v~vv~i~p~Dis~a~l~~A~erg~~~~~~~~d~~~Lpf~~~sFDlV~~s~~L~h~~ 296 (636)
..+|||||||+|.++..+++. +..++++ |+++.+++.|+++...+.+...+...+|+++++||+|+++.+.
T Consensus 86 ~~~vLdiG~G~G~~~~~l~~~~~~~~v~~v---D~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~~---- 158 (269)
T 1p91_A 86 ATAVLDIGCGEGYYTHAFADALPEITTFGL---DVSKVAIKAAAKRYPQVTFCVASSHRLPFSDTSMDAIIRIYAP---- 158 (269)
T ss_dssp CCEEEEETCTTSTTHHHHHHTCTTSEEEEE---ESCHHHHHHHHHHCTTSEEEECCTTSCSBCTTCEEEEEEESCC----
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCeEEEE---eCCHHHHHHHHHhCCCcEEEEcchhhCCCCCCceeEEEEeCCh----
Confidence 348999999999999999987 6677777 9999999999998878889999998999988999999987653
Q ss_pred cChHHHHHHHHhcccCCcEEEEEeC
Q 006662 297 QYDGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 297 ~d~~~~L~el~RvLKPGG~Liis~p 321 (636)
.++.++.|+|||||.+++..+
T Consensus 159 ----~~l~~~~~~L~pgG~l~~~~~ 179 (269)
T 1p91_A 159 ----CKAEELARVVKPGGWVITATP 179 (269)
T ss_dssp ----CCHHHHHHHEEEEEEEEEEEE
T ss_pred ----hhHHHHHHhcCCCcEEEEEEc
Confidence 257999999999999999976
No 90
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.19 E-value=3.6e-11 Score=121.70 Aligned_cols=113 Identities=13% Similarity=0.082 Sum_probs=83.7
Q ss_pred HHHHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhc-C--CEEEEcCcCCchHH------HHHHHHHc----C--CCeE
Q 006662 203 AYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR-N--ILAVSFAPRDTHEA------QVQFALER----G--VPAL 267 (636)
Q Consensus 203 ~~id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~-~--v~vv~i~p~Dis~a------~l~~A~er----g--~~~~ 267 (636)
.....+.+.+...++. +|||||||+|.++..++++ + ..++++ |+++. +++.|+++ + ..+.
T Consensus 30 ~~~~~l~~~~~~~~~~--~vLDiGcG~G~~~~~l~~~~g~~~~v~gv---D~s~~~~~~~~~~~~a~~~~~~~~~~~~v~ 104 (275)
T 3bkx_A 30 AHRLAIAEAWQVKPGE--KILEIGCGQGDLSAVLADQVGSSGHVTGI---DIASPDYGAPLTLGQAWNHLLAGPLGDRLT 104 (275)
T ss_dssp HHHHHHHHHHTCCTTC--EEEEESCTTSHHHHHHHHHHCTTCEEEEE---CSSCTTCCSSSCHHHHHHHHHTSTTGGGEE
T ss_pred HHHHHHHHHcCCCCCC--EEEEeCCCCCHHHHHHHHHhCCCCEEEEE---ECCccccccHHHHHHHHHHHHhcCCCCceE
Confidence 3444556666555555 9999999999999999987 3 666677 55554 55555443 2 2477
Q ss_pred EEEec---cccCCCCCCCeeEEEecccccccccChHHHHHHHHhcccCCcEEEEEeC
Q 006662 268 IGVMA---SIRLPYPSRAFDMAHCSRCLIPWGQYDGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 268 ~~~~d---~~~Lpf~~~sFDlV~~s~~L~h~~~d~~~~L~el~RvLKPGG~Liis~p 321 (636)
+...| ...+|+++++||+|++..+++|+. ++..+++.+.++++|||++++...
T Consensus 105 ~~~~d~~~~~~~~~~~~~fD~v~~~~~l~~~~-~~~~~~~~~~~l~~~gG~l~~~~~ 160 (275)
T 3bkx_A 105 VHFNTNLSDDLGPIADQHFDRVVLAHSLWYFA-SANALALLFKNMAAVCDHVDVAEW 160 (275)
T ss_dssp EECSCCTTTCCGGGTTCCCSEEEEESCGGGSS-CHHHHHHHHHHHTTTCSEEEEEEE
T ss_pred EEECChhhhccCCCCCCCEEEEEEccchhhCC-CHHHHHHHHHHHhCCCCEEEEEEe
Confidence 88777 556677889999999999996664 677777777777788999999864
No 91
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.18 E-value=3.5e-11 Score=119.87 Aligned_cols=99 Identities=11% Similarity=0.031 Sum_probs=81.2
Q ss_pred cEEEEeCCCCcHHHHHHhhcCCEEEEcCcCCchHHHHHHHHHcCC--CeEEEEeccccCCCCC-----CCeeEEEecccc
Q 006662 220 RTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALERGV--PALIGVMASIRLPYPS-----RAFDMAHCSRCL 292 (636)
Q Consensus 220 r~VLDIGCGtG~~a~~La~~~v~vv~i~p~Dis~a~l~~A~erg~--~~~~~~~d~~~Lpf~~-----~sFDlV~~s~~L 292 (636)
.+|||||||+|.++..|++.+..++++ |+++.+++.++++.. ++.+.++|...+++.. ..||+|++..++
T Consensus 58 ~~vLD~GcG~G~~~~~la~~~~~v~gv---D~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~~~~~ 134 (245)
T 3ggd_A 58 LPLIDFACGNGTQTKFLSQFFPRVIGL---DVSKSALEIAAKENTAANISYRLLDGLVPEQAAQIHSEIGDANIYMRTGF 134 (245)
T ss_dssp SCEEEETCTTSHHHHHHHHHSSCEEEE---ESCHHHHHHHHHHSCCTTEEEEECCTTCHHHHHHHHHHHCSCEEEEESSS
T ss_pred CeEEEEcCCCCHHHHHHHHhCCCEEEE---ECCHHHHHHHHHhCcccCceEEECcccccccccccccccCccEEEEcchh
Confidence 489999999999999999987666666 889999999987743 6788888887765432 349999999999
Q ss_pred ccccc-ChHHHHHHHHhcccCCcEEEEEeC
Q 006662 293 IPWGQ-YDGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 293 ~h~~~-d~~~~L~el~RvLKPGG~Liis~p 321 (636)
++... +...+++++.++|||||++++...
T Consensus 135 ~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 164 (245)
T 3ggd_A 135 HHIPVEKRELLGQSLRILLGKQGAMYLIEL 164 (245)
T ss_dssp TTSCGGGHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred hcCCHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 66543 448999999999999999988864
No 92
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.18 E-value=1.2e-10 Score=113.12 Aligned_cols=109 Identities=15% Similarity=0.054 Sum_probs=87.4
Q ss_pred HHHHHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhcCCEEEEcCcCCchHHHHHHHHHc----CC-CeEEEEeccccC
Q 006662 202 DAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALER----GV-PALIGVMASIRL 276 (636)
Q Consensus 202 ~~~id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~~v~vv~i~p~Dis~a~l~~A~er----g~-~~~~~~~d~~~L 276 (636)
......+.+.+...++. +|||||||+|.++..+++.+..++++ |+++.+++.|+++ +. ++.+...|....
T Consensus 63 ~~~~~~~~~~l~~~~~~--~vLdiG~G~G~~~~~la~~~~~v~~v---D~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~ 137 (210)
T 3lbf_A 63 PYMVARMTELLELTPQS--RVLEIGTGSGYQTAILAHLVQHVCSV---ERIKGLQWQARRRLKNLDLHNVSTRHGDGWQG 137 (210)
T ss_dssp HHHHHHHHHHTTCCTTC--EEEEECCTTSHHHHHHHHHSSEEEEE---ESCHHHHHHHHHHHHHTTCCSEEEEESCGGGC
T ss_pred HHHHHHHHHhcCCCCCC--EEEEEcCCCCHHHHHHHHhCCEEEEE---ecCHHHHHHHHHHHHHcCCCceEEEECCcccC
Confidence 34455666666655555 99999999999999999987777777 8899999888764 32 578888888777
Q ss_pred CCCCCCeeEEEecccccccccChHHHHHHHHhcccCCcEEEEEeCC
Q 006662 277 PYPSRAFDMAHCSRCLIPWGQYDGLYLIEVDRVLRPGGYWILSGPP 322 (636)
Q Consensus 277 pf~~~sFDlV~~s~~L~h~~~d~~~~L~el~RvLKPGG~Liis~p~ 322 (636)
+.++++||+|++..+++++. + ++.++|||||++++..+.
T Consensus 138 ~~~~~~~D~i~~~~~~~~~~-~------~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 138 WQARAPFDAIIVTAAPPEIP-T------ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp CGGGCCEEEEEESSBCSSCC-T------HHHHTEEEEEEEEEEECS
T ss_pred CccCCCccEEEEccchhhhh-H------HHHHhcccCcEEEEEEcC
Confidence 66678999999999886655 2 689999999999999774
No 93
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.17 E-value=3.3e-10 Score=106.55 Aligned_cols=108 Identities=11% Similarity=0.070 Sum_probs=86.1
Q ss_pred HHHHHHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhcCCEEEEcCcCCchHHHHHHHHHc----C-CCeEEEEecccc
Q 006662 201 ADAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALER----G-VPALIGVMASIR 275 (636)
Q Consensus 201 ~~~~id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~~v~vv~i~p~Dis~a~l~~A~er----g-~~~~~~~~d~~~ 275 (636)
.....+.+.+.+...++. +|||+|||+|.++..+++.+..++++ |+++.+++.++++ + .++.+...|...
T Consensus 20 ~~~~~~~~~~~~~~~~~~--~vLdiG~G~G~~~~~l~~~~~~v~~v---D~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~ 94 (183)
T 2yxd_A 20 KEEIRAVSIGKLNLNKDD--VVVDVGCGSGGMTVEIAKRCKFVYAI---DYLDGAIEVTKQNLAKFNIKNCQIIKGRAED 94 (183)
T ss_dssp CHHHHHHHHHHHCCCTTC--EEEEESCCCSHHHHHHHTTSSEEEEE---ECSHHHHHHHHHHHHHTTCCSEEEEESCHHH
T ss_pred HHHHHHHHHHHcCCCCCC--EEEEeCCCCCHHHHHHHhcCCeEEEE---eCCHHHHHHHHHHHHHcCCCcEEEEECCccc
Confidence 355556677776655554 99999999999999999976677777 8899998888755 3 357888888766
Q ss_pred CCCCCCCeeEEEecccccccccChHHHHHHHHhcccCCcEEEEEeC
Q 006662 276 LPYPSRAFDMAHCSRCLIPWGQYDGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 276 Lpf~~~sFDlV~~s~~L~h~~~d~~~~L~el~RvLKPGG~Liis~p 321 (636)
++++++||+|+++.+ .+...++.++.++ |||.+++..+
T Consensus 95 -~~~~~~~D~i~~~~~-----~~~~~~l~~~~~~--~gG~l~~~~~ 132 (183)
T 2yxd_A 95 -VLDKLEFNKAFIGGT-----KNIEKIIEILDKK--KINHIVANTI 132 (183)
T ss_dssp -HGGGCCCSEEEECSC-----SCHHHHHHHHHHT--TCCEEEEEES
T ss_pred -cccCCCCcEEEECCc-----ccHHHHHHHHhhC--CCCEEEEEec
Confidence 667789999999876 4668899999999 9999999975
No 94
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.17 E-value=2.6e-10 Score=118.56 Aligned_cols=132 Identities=14% Similarity=0.152 Sum_probs=90.1
Q ss_pred CcEEEEeCCCCcHHHHHHhhcCC-EEEEcCcCCchHHHHHHHHHcCCCeEEE-EeccccCC---CCCCCeeEEEeccccc
Q 006662 219 IRTAIDTGCGVASWGAYLMSRNI-LAVSFAPRDTHEAQVQFALERGVPALIG-VMASIRLP---YPSRAFDMAHCSRCLI 293 (636)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~~v-~vv~i~p~Dis~a~l~~A~erg~~~~~~-~~d~~~Lp---f~~~sFDlV~~s~~L~ 293 (636)
..+|||||||||.++..|++++. .++++ |+++.|++.+.++...+... ..+...++ ++..+||+|++..+++
T Consensus 86 g~~vLDiGcGTG~~t~~L~~~ga~~V~aV---Dvs~~mL~~a~r~~~rv~~~~~~ni~~l~~~~l~~~~fD~v~~d~sf~ 162 (291)
T 3hp7_A 86 DMITIDIGASTGGFTDVMLQNGAKLVYAV---DVGTNQLVWKLRQDDRVRSMEQYNFRYAEPVDFTEGLPSFASIDVSFI 162 (291)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTCSEEEEE---CSSSSCSCHHHHTCTTEEEECSCCGGGCCGGGCTTCCCSEEEECCSSS
T ss_pred ccEEEecCCCccHHHHHHHhCCCCEEEEE---ECCHHHHHHHHHhCcccceecccCceecchhhCCCCCCCEEEEEeeHh
Confidence 34899999999999999999864 56666 77888887765544443322 22333333 3445699999988774
Q ss_pred ccccChHHHHHHHHhcccCCcEEEEEeCCCCccccc-----cCCCCchhhhHHHHHHHHHHHHHhceEee
Q 006662 294 PWGQYDGLYLIEVDRVLRPGGYWILSGPPVNWESHW-----KGWNRTTEDLKSEQNGIETIARSLCWKKL 358 (636)
Q Consensus 294 h~~~d~~~~L~el~RvLKPGG~Liis~p~~~w~~~~-----~~W~~t~e~l~~~~~~ie~la~~l~Wk~v 358 (636)
+. ..+|.++.|+|||||.|++...| .|.... .+.-+.........+++.+++...+|+..
T Consensus 163 sl----~~vL~e~~rvLkpGG~lv~lvkP-qfe~~~~~~~~~G~vrd~~~~~~~~~~v~~~~~~~Gf~v~ 227 (291)
T 3hp7_A 163 SL----NLILPALAKILVDGGQVVALVKP-QFEAGREQIGKNGIVRESSIHEKVLETVTAFAVDYGFSVK 227 (291)
T ss_dssp CG----GGTHHHHHHHSCTTCEEEEEECG-GGTSCGGGCC-CCCCCCHHHHHHHHHHHHHHHHHTTEEEE
T ss_pred hH----HHHHHHHHHHcCcCCEEEEEECc-ccccChhhcCCCCccCCHHHHHHHHHHHHHHHHHCCCEEE
Confidence 33 68999999999999999997432 121110 12233345555667778888889999764
No 95
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.17 E-value=1.3e-10 Score=114.57 Aligned_cols=109 Identities=14% Similarity=0.034 Sum_probs=85.8
Q ss_pred HHHHHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhcCCEEEEcCcCCchHHHHHHHHHcCC---CeEEEEeccccCCC
Q 006662 202 DAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALERGV---PALIGVMASIRLPY 278 (636)
Q Consensus 202 ~~~id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~~v~vv~i~p~Dis~a~l~~A~erg~---~~~~~~~d~~~Lpf 278 (636)
....+.+.+.+...++. +|||||||+|.++..+++.+..++++ |+++.+++.++++.. ++.+...|......
T Consensus 56 ~~~~~~~~~~~~~~~~~--~vLdiG~G~G~~~~~l~~~~~~v~~v---D~~~~~~~~a~~~~~~~~~v~~~~~d~~~~~~ 130 (231)
T 1vbf_A 56 LNLGIFMLDELDLHKGQ--KVLEIGTGIGYYTALIAEIVDKVVSV---EINEKMYNYASKLLSYYNNIKLILGDGTLGYE 130 (231)
T ss_dssp HHHHHHHHHHTTCCTTC--EEEEECCTTSHHHHHHHHHSSEEEEE---ESCHHHHHHHHHHHTTCSSEEEEESCGGGCCG
T ss_pred HHHHHHHHHhcCCCCCC--EEEEEcCCCCHHHHHHHHHcCEEEEE---eCCHHHHHHHHHHHhhcCCeEEEECCcccccc
Confidence 34555666666555555 99999999999999999987666677 889999999887632 57888888766333
Q ss_pred CCCCeeEEEecccccccccChHHHHHHHHhcccCCcEEEEEeCC
Q 006662 279 PSRAFDMAHCSRCLIPWGQYDGLYLIEVDRVLRPGGYWILSGPP 322 (636)
Q Consensus 279 ~~~sFDlV~~s~~L~h~~~d~~~~L~el~RvLKPGG~Liis~p~ 322 (636)
.+++||+|++..+++++. .++.++|||||++++..++
T Consensus 131 ~~~~fD~v~~~~~~~~~~-------~~~~~~L~pgG~l~~~~~~ 167 (231)
T 1vbf_A 131 EEKPYDRVVVWATAPTLL-------CKPYEQLKEGGIMILPIGV 167 (231)
T ss_dssp GGCCEEEEEESSBBSSCC-------HHHHHTEEEEEEEEEEECS
T ss_pred cCCCccEEEECCcHHHHH-------HHHHHHcCCCcEEEEEEcC
Confidence 467899999999986654 4789999999999999763
No 96
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.17 E-value=2.7e-11 Score=121.43 Aligned_cols=112 Identities=13% Similarity=0.082 Sum_probs=81.3
Q ss_pred HHHHHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhcCC-EEEEcCcCCchHHHHHHHHHc----CCCeEEEEeccccC
Q 006662 202 DAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNI-LAVSFAPRDTHEAQVQFALER----GVPALIGVMASIRL 276 (636)
Q Consensus 202 ~~~id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~~v-~vv~i~p~Dis~a~l~~A~er----g~~~~~~~~d~~~L 276 (636)
..+.+.+++.+. .+ +.+|||||||+|..+.++++... .++.+ |+++.+++.|+++ +..+.+..++...+
T Consensus 47 ~~~m~~~a~~~~-~~--G~rVLdiG~G~G~~~~~~~~~~~~~v~~i---d~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~ 120 (236)
T 3orh_A 47 TPYMHALAAAAS-SK--GGRVLEVGFGMAIAASKVQEAPIDEHWII---ECNDGVFQRLRDWAPRQTHKVIPLKGLWEDV 120 (236)
T ss_dssp HHHHHHHHHHHT-TT--CEEEEEECCTTSHHHHHHTTSCEEEEEEE---ECCHHHHHHHHHHGGGCSSEEEEEESCHHHH
T ss_pred HHHHHHHHHhhc-cC--CCeEEEECCCccHHHHHHHHhCCcEEEEE---eCCHHHHHHHHHHHhhCCCceEEEeehHHhh
Confidence 445556666553 23 34899999999999999998743 34444 8899999998765 34466666665443
Q ss_pred --CCCCCCeeEEEe-----cccccccccChHHHHHHHHhcccCCcEEEEEe
Q 006662 277 --PYPSRAFDMAHC-----SRCLIPWGQYDGLYLIEVDRVLRPGGYWILSG 320 (636)
Q Consensus 277 --pf~~~sFDlV~~-----s~~L~h~~~d~~~~L~el~RvLKPGG~Liis~ 320 (636)
++++++||.|+. ...+.|. .+...++.++.|+|||||.|++..
T Consensus 121 ~~~~~~~~FD~i~~D~~~~~~~~~~~-~~~~~~~~e~~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 121 APTLPDGHFDGILYDTYPLSEETWHT-HQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp GGGSCTTCEEEEEECCCCCBGGGTTT-HHHHHHHHTHHHHEEEEEEEEECC
T ss_pred cccccccCCceEEEeeeecccchhhh-cchhhhhhhhhheeCCCCEEEEEe
Confidence 578899999975 3334333 356889999999999999998863
No 97
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.16 E-value=4.1e-10 Score=117.49 Aligned_cols=111 Identities=16% Similarity=0.147 Sum_probs=86.7
Q ss_pred HHHHHHHhhcc--CCCCCcEEEEeCCCCcHHHHHHhhc--CCEEEEcCcCCchHHHHHHHHHc----CC--CeEEEEecc
Q 006662 204 YIDDIGKLINL--KDGSIRTAIDTGCGVASWGAYLMSR--NILAVSFAPRDTHEAQVQFALER----GV--PALIGVMAS 273 (636)
Q Consensus 204 ~id~L~~lL~l--~~g~~r~VLDIGCGtG~~a~~La~~--~v~vv~i~p~Dis~a~l~~A~er----g~--~~~~~~~d~ 273 (636)
....+.+.++. .+ ..+|||||||+|.++..++++ +..++.+ |++ .+++.|+++ +. .+.+...|.
T Consensus 151 ~~~~~~~~~~~~~~~--~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~---D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~ 224 (335)
T 2r3s_A 151 PAQLIAQLVNENKIE--PLKVLDISASHGLFGIAVAQHNPNAEIFGV---DWA-SVLEVAKENARIQGVASRYHTIAGSA 224 (335)
T ss_dssp HHHHHHHHHTC--CC--CSEEEEETCTTCHHHHHHHHHCTTCEEEEE---ECH-HHHHHHHHHHHHHTCGGGEEEEESCT
T ss_pred hHHHHHHhcccccCC--CCEEEEECCCcCHHHHHHHHHCCCCeEEEE---ecH-HHHHHHHHHHHhcCCCcceEEEeccc
Confidence 33455555544 33 349999999999999999987 5666666 888 888887754 32 488888888
Q ss_pred ccCCCCCCCeeEEEecccccccccCh-HHHHHHHHhcccCCcEEEEEeC
Q 006662 274 IRLPYPSRAFDMAHCSRCLIPWGQYD-GLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 274 ~~Lpf~~~sFDlV~~s~~L~h~~~d~-~~~L~el~RvLKPGG~Liis~p 321 (636)
...+++.+ ||+|++..+++++.+.. ..+++++.++|+|||++++..+
T Consensus 225 ~~~~~~~~-~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 272 (335)
T 2r3s_A 225 FEVDYGND-YDLVLLPNFLHHFDVATCEQLLRKIKTALAVEGKVIVFDF 272 (335)
T ss_dssp TTSCCCSC-EEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ccCCCCCC-CcEEEEcchhccCCHHHHHHHHHHHHHhCCCCcEEEEEee
Confidence 77777655 99999999998775322 7899999999999999999875
No 98
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.16 E-value=8.4e-10 Score=108.77 Aligned_cols=120 Identities=17% Similarity=0.087 Sum_probs=87.8
Q ss_pred cEEEEeCCC-CcHHHHHHhhc-CCEEEEcCcCCchHHHHHHHHHc----CCCeEEEEeccccC-CCCCCCeeEEEecccc
Q 006662 220 RTAIDTGCG-VASWGAYLMSR-NILAVSFAPRDTHEAQVQFALER----GVPALIGVMASIRL-PYPSRAFDMAHCSRCL 292 (636)
Q Consensus 220 r~VLDIGCG-tG~~a~~La~~-~v~vv~i~p~Dis~a~l~~A~er----g~~~~~~~~d~~~L-pf~~~sFDlV~~s~~L 292 (636)
.+|||+||| +|.++..+++. +..++++ |+++.+++.|+++ +.++.+..+|...+ ++++++||+|+++..+
T Consensus 57 ~~vLDlG~G~~G~~~~~la~~~~~~v~~v---D~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~I~~npp~ 133 (230)
T 3evz_A 57 EVALEIGTGHTAMMALMAEKFFNCKVTAT---EVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVVEGTFDVIFSAPPY 133 (230)
T ss_dssp CEEEEECCTTTCHHHHHHHHHHCCEEEEE---ECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTCCSCEEEEEECCCC
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCCEEEEE---ECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhhcccCceeEEEECCCC
Confidence 499999999 99999999998 7777777 8899999888654 45678888886433 4667899999998665
Q ss_pred ccccc------------------ChHHHHHHHHhcccCCcEEEEEeCCCCccccccCCCCchhhhHHHHHHHHHHHHHhc
Q 006662 293 IPWGQ------------------YDGLYLIEVDRVLRPGGYWILSGPPVNWESHWKGWNRTTEDLKSEQNGIETIARSLC 354 (636)
Q Consensus 293 ~h~~~------------------d~~~~L~el~RvLKPGG~Liis~p~~~w~~~~~~W~~t~e~l~~~~~~ie~la~~l~ 354 (636)
++... ....++.++.++|||||++++..+.. . ...+.+.+.++..+
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~------------~----~~~~~~~~~l~~~g 197 (230)
T 3evz_A 134 YDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDK------------E----KLLNVIKERGIKLG 197 (230)
T ss_dssp C---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESC------------H----HHHHHHHHHHHHTT
T ss_pred cCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEeccc------------H----hHHHHHHHHHHHcC
Confidence 33221 02678999999999999999985411 1 12344666777778
Q ss_pred eEee
Q 006662 355 WKKL 358 (636)
Q Consensus 355 Wk~v 358 (636)
|+..
T Consensus 198 ~~~~ 201 (230)
T 3evz_A 198 YSVK 201 (230)
T ss_dssp CEEE
T ss_pred CceE
Confidence 8543
No 99
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.16 E-value=2.3e-10 Score=112.09 Aligned_cols=98 Identities=15% Similarity=0.264 Sum_probs=79.1
Q ss_pred cEEEEeCCCCcHHHHHHhhc--CCEEEEcCcCCchHHHHHHHHHc----C-CCeEEEEeccccCC--CCCCCeeEEEecc
Q 006662 220 RTAIDTGCGVASWGAYLMSR--NILAVSFAPRDTHEAQVQFALER----G-VPALIGVMASIRLP--YPSRAFDMAHCSR 290 (636)
Q Consensus 220 r~VLDIGCGtG~~a~~La~~--~v~vv~i~p~Dis~a~l~~A~er----g-~~~~~~~~d~~~Lp--f~~~sFDlV~~s~ 290 (636)
.+|||||||+|.++..+++. +..++++ |+++.+++.|+++ + .++.+..+|...++ +++++||+|+++.
T Consensus 43 ~~vLDiGcG~G~~~~~la~~~p~~~v~gv---D~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~D~i~~~~ 119 (214)
T 1yzh_A 43 PIHVEVGSGKGAFVSGMAKQNPDINYIGI---DIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLNF 119 (214)
T ss_dssp CEEEEESCTTSHHHHHHHHHCTTSEEEEE---ESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCTTCCSEEEEES
T ss_pred CeEEEEccCcCHHHHHHHHHCCCCCEEEE---EcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCCCCCCEEEEEC
Confidence 48999999999999999987 4566777 8899998887654 3 36888888988877 7788999999986
Q ss_pred ccccccc--------ChHHHHHHHHhcccCCcEEEEEeC
Q 006662 291 CLIPWGQ--------YDGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 291 ~L~h~~~--------d~~~~L~el~RvLKPGG~Liis~p 321 (636)
.. +|.. ....++.++.++|||||.+++...
T Consensus 120 ~~-~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 157 (214)
T 1yzh_A 120 SD-PWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTD 157 (214)
T ss_dssp CC-CCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEES
T ss_pred CC-CccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeC
Confidence 54 4432 125799999999999999999853
No 100
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.15 E-value=1.7e-10 Score=113.73 Aligned_cols=98 Identities=12% Similarity=0.201 Sum_probs=79.1
Q ss_pred cEEEEeCCCCcHHHHHHhhc--CCEEEEcCcCCchHHHHHHHHHc----CC-CeEEEEeccccCC--CCCCCeeEEEecc
Q 006662 220 RTAIDTGCGVASWGAYLMSR--NILAVSFAPRDTHEAQVQFALER----GV-PALIGVMASIRLP--YPSRAFDMAHCSR 290 (636)
Q Consensus 220 r~VLDIGCGtG~~a~~La~~--~v~vv~i~p~Dis~a~l~~A~er----g~-~~~~~~~d~~~Lp--f~~~sFDlV~~s~ 290 (636)
.+|||||||+|.++..|++. +..++++ |+++.+++.|+++ +. ++.+..+|...++ +++++||.|+++.
T Consensus 40 ~~vLDiGcG~G~~~~~la~~~p~~~v~gi---D~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~~~~~d~v~~~~ 116 (213)
T 2fca_A 40 PIHIEVGTGKGQFISGMAKQNPDINYIGI---ELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLNF 116 (213)
T ss_dssp CEEEEECCTTSHHHHHHHHHCTTSEEEEE---CSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEES
T ss_pred ceEEEEecCCCHHHHHHHHHCCCCCEEEE---EechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCcCCcCEEEEEC
Confidence 38999999999999999987 5667777 9999999888754 33 5888888887776 7788999998865
Q ss_pred cccccccC--------hHHHHHHHHhcccCCcEEEEEeC
Q 006662 291 CLIPWGQY--------DGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 291 ~L~h~~~d--------~~~~L~el~RvLKPGG~Liis~p 321 (636)
.. +|... ...++.++.++|||||.|++...
T Consensus 117 ~~-p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td 154 (213)
T 2fca_A 117 SD-PWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTD 154 (213)
T ss_dssp CC-CCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEES
T ss_pred CC-CCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeC
Confidence 44 44321 25799999999999999999853
No 101
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.15 E-value=1.9e-10 Score=109.33 Aligned_cols=113 Identities=12% Similarity=0.021 Sum_probs=86.0
Q ss_pred cEEEEeCCCCcHHHHHHhhcCCEEEEcCcCCchHHHHHHHHHcCCCeEEEEeccccCCCCCCCeeEEEecccccccccC-
Q 006662 220 RTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALERGVPALIGVMASIRLPYPSRAFDMAHCSRCLIPWGQY- 298 (636)
Q Consensus 220 r~VLDIGCGtG~~a~~La~~~v~vv~i~p~Dis~a~l~~A~erg~~~~~~~~d~~~Lpf~~~sFDlV~~s~~L~h~~~d- 298 (636)
.+|||+|||+|.++..+++++ .++++ |+++.+++. ..++.+..+|... ++++++||+|+++..+++..+.
T Consensus 25 ~~vLD~GcG~G~~~~~l~~~~-~v~gv---D~s~~~~~~----~~~~~~~~~d~~~-~~~~~~fD~i~~n~~~~~~~~~~ 95 (170)
T 3q87_B 25 KIVLDLGTSTGVITEQLRKRN-TVVST---DLNIRALES----HRGGNLVRADLLC-SINQESVDVVVFNPPYVPDTDDP 95 (170)
T ss_dssp CEEEEETCTTCHHHHHHTTTS-EEEEE---ESCHHHHHT----CSSSCEEECSTTT-TBCGGGCSEEEECCCCBTTCCCT
T ss_pred CeEEEeccCccHHHHHHHhcC-cEEEE---ECCHHHHhc----ccCCeEEECChhh-hcccCCCCEEEECCCCccCCccc
Confidence 389999999999999999998 77777 999999887 3456778888766 6677899999998887443322
Q ss_pred -------hHHHHHHHHhcccCCcEEEEEeCCCCccccccCCCCchhhhHHHHHHHHHHHHHhceEeec
Q 006662 299 -------DGLYLIEVDRVLRPGGYWILSGPPVNWESHWKGWNRTTEDLKSEQNGIETIARSLCWKKLI 359 (636)
Q Consensus 299 -------~~~~L~el~RvLKPGG~Liis~p~~~w~~~~~~W~~t~e~l~~~~~~ie~la~~l~Wk~v~ 359 (636)
...++.++.+.| |||.+++..+.. ...+.+.++++..+|+...
T Consensus 96 ~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~-----------------~~~~~l~~~l~~~gf~~~~ 145 (170)
T 3q87_B 96 IIGGGYLGREVIDRFVDAV-TVGMLYLLVIEA-----------------NRPKEVLARLEERGYGTRI 145 (170)
T ss_dssp TTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGG-----------------GCHHHHHHHHHHTTCEEEE
T ss_pred cccCCcchHHHHHHHHhhC-CCCEEEEEEecC-----------------CCHHHHHHHHHHCCCcEEE
Confidence 257889999999 999999986411 0123466677778887543
No 102
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.15 E-value=1e-10 Score=114.22 Aligned_cols=116 Identities=12% Similarity=0.071 Sum_probs=84.7
Q ss_pred HHHHHHHHHHhhccC-CCCCcEEEEeCCCCcHHHHHHhhcCC-EEEEcCcCCchHHHHHHHHHc----CC---CeEEEEe
Q 006662 201 ADAYIDDIGKLINLK-DGSIRTAIDTGCGVASWGAYLMSRNI-LAVSFAPRDTHEAQVQFALER----GV---PALIGVM 271 (636)
Q Consensus 201 ~~~~id~L~~lL~l~-~g~~r~VLDIGCGtG~~a~~La~~~v-~vv~i~p~Dis~a~l~~A~er----g~---~~~~~~~ 271 (636)
.+.+.+.+.+.+... ++. +|||+|||+|.++..++.++. .++++ |+++.+++.|+++ +. .+.+..+
T Consensus 37 ~~~~~~~l~~~l~~~~~~~--~vLDlGcGtG~~~~~~~~~~~~~v~gv---D~s~~~l~~a~~~~~~~~~~~~~v~~~~~ 111 (201)
T 2ift_A 37 GDRVKETLFNWLMPYIHQS--ECLDGFAGSGSLGFEALSRQAKKVTFL---ELDKTVANQLKKNLQTLKCSSEQAEVINQ 111 (201)
T ss_dssp -CHHHHHHHHHHHHHHTTC--EEEETTCTTCHHHHHHHHTTCSEEEEE---CSCHHHHHHHHHHHHHTTCCTTTEEEECS
T ss_pred HHHHHHHHHHHHHHhcCCC--eEEEcCCccCHHHHHHHHccCCEEEEE---ECCHHHHHHHHHHHHHhCCCccceEEEEC
Confidence 344455555555432 344 899999999999999887764 66667 9999999988754 33 6788888
Q ss_pred ccccCCC--CCCC-eeEEEecccccccccChHHHHHHH--HhcccCCcEEEEEeCCC
Q 006662 272 ASIRLPY--PSRA-FDMAHCSRCLIPWGQYDGLYLIEV--DRVLRPGGYWILSGPPV 323 (636)
Q Consensus 272 d~~~Lpf--~~~s-FDlV~~s~~L~h~~~d~~~~L~el--~RvLKPGG~Liis~p~~ 323 (636)
|...+.. ++++ ||+|++...+ + ..+...++.++ .++|||||.++++..+.
T Consensus 112 d~~~~~~~~~~~~~fD~I~~~~~~-~-~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~ 166 (201)
T 2ift_A 112 SSLDFLKQPQNQPHFDVVFLDPPF-H-FNLAEQAISLLCENNWLKPNALIYVETEKD 166 (201)
T ss_dssp CHHHHTTSCCSSCCEEEEEECCCS-S-SCHHHHHHHHHHHTTCEEEEEEEEEEEESS
T ss_pred CHHHHHHhhccCCCCCEEEECCCC-C-CccHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 8766432 3678 9999998775 3 23457888888 77899999999987533
No 103
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.14 E-value=5.3e-10 Score=111.77 Aligned_cols=116 Identities=10% Similarity=0.062 Sum_probs=86.6
Q ss_pred cEEEEeCCCCcHHHHHHhh--cCCEEEEcCcCCchHHHHHHHHHc----CC-CeEEEEeccccCCCC---CCCeeEEEec
Q 006662 220 RTAIDTGCGVASWGAYLMS--RNILAVSFAPRDTHEAQVQFALER----GV-PALIGVMASIRLPYP---SRAFDMAHCS 289 (636)
Q Consensus 220 r~VLDIGCGtG~~a~~La~--~~v~vv~i~p~Dis~a~l~~A~er----g~-~~~~~~~d~~~Lpf~---~~sFDlV~~s 289 (636)
.+|||||||+|.++..++. .+..++++ |+++.+++.|+++ +. ++.+..++...++++ +++||+|++.
T Consensus 72 ~~vLDiG~G~G~~~~~la~~~~~~~v~~v---D~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~ 148 (240)
T 1xdz_A 72 NTICDVGAGAGFPSLPIKICFPHLHVTIV---DSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVTAR 148 (240)
T ss_dssp CEEEEECSSSCTTHHHHHHHCTTCEEEEE---ESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEEEEE
T ss_pred CEEEEecCCCCHHHHHHHHhCCCCEEEEE---eCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccEEEEe
Confidence 4899999999999999985 35666667 8899888887653 43 588888888887764 6799999996
Q ss_pred ccccccccChHHHHHHHHhcccCCcEEEEEeCCCCccccccCCCCchhhhHHHHHHHHHHHHHhceEee
Q 006662 290 RCLIPWGQYDGLYLIEVDRVLRPGGYWILSGPPVNWESHWKGWNRTTEDLKSEQNGIETIARSLCWKKL 358 (636)
Q Consensus 290 ~~L~h~~~d~~~~L~el~RvLKPGG~Liis~p~~~w~~~~~~W~~t~e~l~~~~~~ie~la~~l~Wk~v 358 (636)
.+ .+...++.++.++|||||+|++.... ...+ ....+.+.++..+++..
T Consensus 149 ~~-----~~~~~~l~~~~~~LkpgG~l~~~~g~-----------~~~~----~~~~~~~~l~~~g~~~~ 197 (240)
T 1xdz_A 149 AV-----ARLSVLSELCLPLVKKNGLFVALKAA-----------SAEE----ELNAGKKAITTLGGELE 197 (240)
T ss_dssp CC-----SCHHHHHHHHGGGEEEEEEEEEEECC------------CHH----HHHHHHHHHHHTTEEEE
T ss_pred cc-----CCHHHHHHHHHHhcCCCCEEEEEeCC-----------CchH----HHHHHHHHHHHcCCeEe
Confidence 52 46689999999999999999987321 1111 23345566777777654
No 104
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.14 E-value=4.4e-10 Score=113.73 Aligned_cols=118 Identities=17% Similarity=0.105 Sum_probs=86.5
Q ss_pred CcccHHHHHHHHHHhhccC-CCCCcEEEEeCCCCcHHHHHHhhcCC-EEEEcCcCCchHHHHHHHHHc----CC--CeEE
Q 006662 197 FPRGADAYIDDIGKLINLK-DGSIRTAIDTGCGVASWGAYLMSRNI-LAVSFAPRDTHEAQVQFALER----GV--PALI 268 (636)
Q Consensus 197 f~~g~~~~id~L~~lL~l~-~g~~r~VLDIGCGtG~~a~~La~~~v-~vv~i~p~Dis~a~l~~A~er----g~--~~~~ 268 (636)
|..+.+.. .+..++... ++. +|||+|||+|.++..+++++. .++++ |+++.+++.|+++ +. .+.+
T Consensus 31 ~~~~~d~~--ll~~~~~~~~~~~--~vLDlG~G~G~~~~~la~~~~~~v~gv---Di~~~~~~~a~~n~~~~~~~~~v~~ 103 (259)
T 3lpm_A 31 FSFSIDAV--LLAKFSYLPIRKG--KIIDLCSGNGIIPLLLSTRTKAKIVGV---EIQERLADMAKRSVAYNQLEDQIEI 103 (259)
T ss_dssp BCCCHHHH--HHHHHCCCCSSCC--EEEETTCTTTHHHHHHHTTCCCEEEEE---CCSHHHHHHHHHHHHHTTCTTTEEE
T ss_pred ccCcHHHH--HHHHHhcCCCCCC--EEEEcCCchhHHHHHHHHhcCCcEEEE---ECCHHHHHHHHHHHHHCCCcccEEE
Confidence 34455643 355555544 444 999999999999999999854 56666 9999999888754 33 3788
Q ss_pred EEeccccCC--CCCCCeeEEEeccccccc----c---------------cChHHHHHHHHhcccCCcEEEEEeC
Q 006662 269 GVMASIRLP--YPSRAFDMAHCSRCLIPW----G---------------QYDGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 269 ~~~d~~~Lp--f~~~sFDlV~~s~~L~h~----~---------------~d~~~~L~el~RvLKPGG~Liis~p 321 (636)
...|...++ +++++||+|+++..+... . .+...++.++.++|||||+|++..+
T Consensus 104 ~~~D~~~~~~~~~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 177 (259)
T 3lpm_A 104 IEYDLKKITDLIPKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHR 177 (259)
T ss_dssp ECSCGGGGGGTSCTTCEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EECcHHHhhhhhccCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEc
Confidence 888887765 557899999997654222 0 1125699999999999999999865
No 105
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.13 E-value=1.5e-10 Score=117.35 Aligned_cols=115 Identities=16% Similarity=0.096 Sum_probs=84.5
Q ss_pred cEEEEeCCCCcHHHHHHhhcCCEEEEcCcCCchHHHHHHHHHc----CCCeEEEEeccccCCCCCCCeeEEEeccccccc
Q 006662 220 RTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALER----GVPALIGVMASIRLPYPSRAFDMAHCSRCLIPW 295 (636)
Q Consensus 220 r~VLDIGCGtG~~a~~La~~~v~vv~i~p~Dis~a~l~~A~er----g~~~~~~~~d~~~Lpf~~~sFDlV~~s~~L~h~ 295 (636)
.+|||+|||+|.++..+++.+..++++ |+++.+++.++++ +..+.+...+... ++++++||+|+++...++
T Consensus 122 ~~VLDiGcG~G~l~~~la~~g~~v~gv---Di~~~~v~~a~~n~~~~~~~v~~~~~d~~~-~~~~~~fD~Vv~n~~~~~- 196 (254)
T 2nxc_A 122 DKVLDLGTGSGVLAIAAEKLGGKALGV---DIDPMVLPQAEANAKRNGVRPRFLEGSLEA-ALPFGPFDLLVANLYAEL- 196 (254)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCEEEEE---ESCGGGHHHHHHHHHHTTCCCEEEESCHHH-HGGGCCEEEEEEECCHHH-
T ss_pred CEEEEecCCCcHHHHHHHHhCCeEEEE---ECCHHHHHHHHHHHHHcCCcEEEEECChhh-cCcCCCCCEEEECCcHHH-
Confidence 499999999999999999987666666 7777777777653 4446677666544 245678999999765422
Q ss_pred ccChHHHHHHHHhcccCCcEEEEEeCCCCccccccCCCCchhhhHHHHHHHHHHHHHhceEeec
Q 006662 296 GQYDGLYLIEVDRVLRPGGYWILSGPPVNWESHWKGWNRTTEDLKSEQNGIETIARSLCWKKLI 359 (636)
Q Consensus 296 ~~d~~~~L~el~RvLKPGG~Liis~p~~~w~~~~~~W~~t~e~l~~~~~~ie~la~~l~Wk~v~ 359 (636)
...++.++.++|||||++++++... ...+.+.++++..+|+.+.
T Consensus 197 ---~~~~l~~~~~~LkpgG~lils~~~~-----------------~~~~~v~~~l~~~Gf~~~~ 240 (254)
T 2nxc_A 197 ---HAALAPRYREALVPGGRALLTGILK-----------------DRAPLVREAMAGAGFRPLE 240 (254)
T ss_dssp ---HHHHHHHHHHHEEEEEEEEEEEEEG-----------------GGHHHHHHHHHHTTCEEEE
T ss_pred ---HHHHHHHHHHHcCCCCEEEEEeecc-----------------CCHHHHHHHHHHCCCEEEE
Confidence 3689999999999999999986411 1134566777778887654
No 106
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.13 E-value=1.2e-10 Score=134.72 Aligned_cols=123 Identities=15% Similarity=0.162 Sum_probs=75.5
Q ss_pred cceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhh----ccc----chhh-ccccccCCCCCccceeeecc
Q 006662 477 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GLI----GTYQ-NWCEAMSTYPRTYDLIHADS 547 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gli----~~~~-~~ce~~~~yp~t~Dl~H~~~ 547 (636)
...|||+|||+|+|+-+++..+- -.|+.+|.++..+..+.+. |+- -+++ |..+.+.....+||+|-++-
T Consensus 540 g~~VLDlg~GtG~~sl~aa~~ga--~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~DP 617 (703)
T 3v97_A 540 GKDFLNLFSYTGSATVHAGLGGA--RSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDP 617 (703)
T ss_dssp TCEEEEESCTTCHHHHHHHHTTC--SEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEECC
T ss_pred CCcEEEeeechhHHHHHHHHCCC--CEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccEEEECC
Confidence 46899999999999998877653 2456667777788777664 332 1121 22121222347899998865
Q ss_pred c-cccC-------CCCcCHHHHHHHHhhcccCCcEEEEEeCHHHHHHHHHHHhcCCCceEEe
Q 006662 548 I-FSLY-------KDRCEMEDVLLEMDRILRPEGSVIIRDDVDILVKIKSITDGMEWEGRIA 601 (636)
Q Consensus 548 ~-fs~~-------~~~c~~~~~l~e~dRiLrPgG~~i~~d~~~~~~~~~~~~~~~~W~~~~~ 601 (636)
- |+.. ...-+...++.++-|+|+|||.++++-.......-.+.+....++....
T Consensus 618 P~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~~~~~~~~~~l~~~g~~~~~i 679 (703)
T 3v97_A 618 PTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEI 679 (703)
T ss_dssp CSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECCTTCCCCHHHHHHTTEEEEEC
T ss_pred ccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCcccccCHHHHHHcCCceeee
Confidence 3 3311 1112456889999999999999999854421111233444455554443
No 107
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.13 E-value=6.1e-11 Score=110.70 Aligned_cols=116 Identities=17% Similarity=0.183 Sum_probs=85.2
Q ss_pred ccHHHHHHHHHHhhccC--CCCCcEEEEeCCCCcHHHHHHhhcCCEEEEcCcCCchHHHHHHHHHc----CCCeEEEEec
Q 006662 199 RGADAYIDDIGKLINLK--DGSIRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALER----GVPALIGVMA 272 (636)
Q Consensus 199 ~g~~~~id~L~~lL~l~--~g~~r~VLDIGCGtG~~a~~La~~~v~vv~i~p~Dis~a~l~~A~er----g~~~~~~~~d 272 (636)
...+...+.+.+.+... ++. +|||+|||+|.++..+++++..++++ |+++.+++.|+++ +.++.+...|
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~--~vLD~GcG~G~~~~~l~~~~~~v~~v---D~~~~~~~~a~~~~~~~~~~~~~~~~d 96 (171)
T 1ws6_A 22 PSPVRLRKALFDYLRLRYPRRG--RFLDPFAGSGAVGLEAASEGWEAVLV---EKDPEAVRLLKENVRRTGLGARVVALP 96 (171)
T ss_dssp CCCHHHHHHHHHHHHHHCTTCC--EEEEETCSSCHHHHHHHHTTCEEEEE---CCCHHHHHHHHHHHHHHTCCCEEECSC
T ss_pred CCHHHHHHHHHHHHHhhccCCC--eEEEeCCCcCHHHHHHHHCCCeEEEE---eCCHHHHHHHHHHHHHcCCceEEEecc
Confidence 33455666666666432 344 89999999999999999988766666 9999999888754 3367777777
Q ss_pred ccc-CC-C--CCCCeeEEEecccccccccChHHHHHHHH--hcccCCcEEEEEeCC
Q 006662 273 SIR-LP-Y--PSRAFDMAHCSRCLIPWGQYDGLYLIEVD--RVLRPGGYWILSGPP 322 (636)
Q Consensus 273 ~~~-Lp-f--~~~sFDlV~~s~~L~h~~~d~~~~L~el~--RvLKPGG~Liis~p~ 322 (636)
... ++ . ..++||+|+++..++ .+...++..+. ++|||||.++++.+.
T Consensus 97 ~~~~~~~~~~~~~~~D~i~~~~~~~---~~~~~~~~~~~~~~~L~~gG~~~~~~~~ 149 (171)
T 1ws6_A 97 VEVFLPEAKAQGERFTVAFMAPPYA---MDLAALFGELLASGLVEAGGLYVLQHPK 149 (171)
T ss_dssp HHHHHHHHHHTTCCEEEEEECCCTT---SCTTHHHHHHHHHTCEEEEEEEEEEEET
T ss_pred HHHHHHhhhccCCceEEEEECCCCc---hhHHHHHHHHHhhcccCCCcEEEEEeCC
Confidence 655 22 1 134899999987663 34456777777 999999999998763
No 108
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.12 E-value=7.7e-10 Score=104.60 Aligned_cols=110 Identities=17% Similarity=0.098 Sum_probs=84.2
Q ss_pred HHHHHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhcCCEEEEcCcCCchHHHHHHHHHc----CC--CeEEEEecccc
Q 006662 202 DAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALER----GV--PALIGVMASIR 275 (636)
Q Consensus 202 ~~~id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~~v~vv~i~p~Dis~a~l~~A~er----g~--~~~~~~~d~~~ 275 (636)
......+.+.+...++. +|||+|||+|.++..+++.+..++.+ |+++.+++.++++ +. .+.+...+...
T Consensus 19 ~~~~~~~~~~~~~~~~~--~vldiG~G~G~~~~~l~~~~~~v~~~---D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 93 (192)
T 1l3i_A 19 MEVRCLIMCLAEPGKND--VAVDVGCGTGGVTLELAGRVRRVYAI---DRNPEAISTTEMNLQRHGLGDNVTLMEGDAPE 93 (192)
T ss_dssp HHHHHHHHHHHCCCTTC--EEEEESCTTSHHHHHHHTTSSEEEEE---ESCHHHHHHHHHHHHHTTCCTTEEEEESCHHH
T ss_pred HHHHHHHHHhcCCCCCC--EEEEECCCCCHHHHHHHHhcCEEEEE---ECCHHHHHHHHHHHHHcCCCcceEEEecCHHH
Confidence 44555666666555555 99999999999999999987666666 8888888888753 33 56777777655
Q ss_pred CCCCC-CCeeEEEecccccccccChHHHHHHHHhcccCCcEEEEEeC
Q 006662 276 LPYPS-RAFDMAHCSRCLIPWGQYDGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 276 Lpf~~-~sFDlV~~s~~L~h~~~d~~~~L~el~RvLKPGG~Liis~p 321 (636)
+++. ++||+|++...+. +...++.++.++|+|||.+++..+
T Consensus 94 -~~~~~~~~D~v~~~~~~~----~~~~~l~~~~~~l~~gG~l~~~~~ 135 (192)
T 1l3i_A 94 -ALCKIPDIDIAVVGGSGG----ELQEILRIIKDKLKPGGRIIVTAI 135 (192)
T ss_dssp -HHTTSCCEEEEEESCCTT----CHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred -hcccCCCCCEEEECCchH----HHHHHHHHHHHhcCCCcEEEEEec
Confidence 3333 5899999987663 447899999999999999999865
No 109
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.12 E-value=3.6e-10 Score=108.77 Aligned_cols=102 Identities=19% Similarity=0.197 Sum_probs=79.3
Q ss_pred CCCCCcEEEEeCCCCcHHHHHHhhc---CCEEEEcCcCCchHHHHHHHHHc----C--CCeEEEEeccccCC-CCCCCee
Q 006662 215 KDGSIRTAIDTGCGVASWGAYLMSR---NILAVSFAPRDTHEAQVQFALER----G--VPALIGVMASIRLP-YPSRAFD 284 (636)
Q Consensus 215 ~~g~~r~VLDIGCGtG~~a~~La~~---~v~vv~i~p~Dis~a~l~~A~er----g--~~~~~~~~d~~~Lp-f~~~sFD 284 (636)
.++. +|||+|||+|.++..++++ ...++++ |+++.+++.|+++ + .++.+...|...++ +.+++||
T Consensus 21 ~~~~--~vLDlGcG~G~~~~~l~~~~~~~~~v~~v---D~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD 95 (197)
T 3eey_A 21 KEGD--TVVDATCGNGNDTAFLASLVGENGRVFGF---DIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVK 95 (197)
T ss_dssp CTTC--EEEESCCTTSHHHHHHHHHHCTTCEEEEE---CSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEE
T ss_pred CCCC--EEEEcCCCCCHHHHHHHHHhCCCCEEEEE---ECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCce
Confidence 4444 9999999999999999987 2466666 8899999888755 2 35788888887776 6678999
Q ss_pred EEEecccccccc-----c---ChHHHHHHHHhcccCCcEEEEEeC
Q 006662 285 MAHCSRCLIPWG-----Q---YDGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 285 lV~~s~~L~h~~-----~---d~~~~L~el~RvLKPGG~Liis~p 321 (636)
+|+++..+.+.. . +...++.++.++|||||++++...
T Consensus 96 ~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~ 140 (197)
T 3eey_A 96 AVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIY 140 (197)
T ss_dssp EEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEc
Confidence 999976552211 1 225799999999999999999864
No 110
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.12 E-value=3.6e-10 Score=112.27 Aligned_cols=98 Identities=14% Similarity=0.215 Sum_probs=77.8
Q ss_pred cEEEEeCCCCcHHHHHHhhc--CCEEEEcCcCCchHHHHHHHHHc----CC-CeEEEEeccccC-C--CCCCCeeEEEec
Q 006662 220 RTAIDTGCGVASWGAYLMSR--NILAVSFAPRDTHEAQVQFALER----GV-PALIGVMASIRL-P--YPSRAFDMAHCS 289 (636)
Q Consensus 220 r~VLDIGCGtG~~a~~La~~--~v~vv~i~p~Dis~a~l~~A~er----g~-~~~~~~~d~~~L-p--f~~~sFDlV~~s 289 (636)
.+|||||||+|.++..+++. +..++++ |+++.+++.|+++ +. ++.+..+|...+ + +++++||.|+++
T Consensus 36 ~~vLDiGcG~G~~~~~lA~~~p~~~v~gi---D~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~ 112 (218)
T 3dxy_A 36 PVTLEIGFGMGASLVAMAKDRPEQDFLGI---EVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLF 112 (218)
T ss_dssp CEEEEESCTTCHHHHHHHHHCTTSEEEEE---CSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEE
T ss_pred CeEEEEeeeChHHHHHHHHHCCCCeEEEE---EecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEe
Confidence 48999999999999999987 4556677 8899988887644 33 588888887663 4 788999999997
Q ss_pred ccccccccCh--------HHHHHHHHhcccCCcEEEEEeC
Q 006662 290 RCLIPWGQYD--------GLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 290 ~~L~h~~~d~--------~~~L~el~RvLKPGG~Liis~p 321 (636)
+.. +|.... ..++.++.|+|||||+|+++..
T Consensus 113 ~~~-p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td 151 (218)
T 3dxy_A 113 FPD-PWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATD 151 (218)
T ss_dssp SCC-CCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEES
T ss_pred CCC-CccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeC
Confidence 654 554332 2599999999999999999864
No 111
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.11 E-value=2.3e-10 Score=108.58 Aligned_cols=127 Identities=17% Similarity=0.088 Sum_probs=89.7
Q ss_pred ceecCCCCCCCcccHHHHHHHHHHhhc-cCCCCCcEEEEeCCCCcHHHHHHhhcC-CEEEEcCcCCchHHHHHHHHHc--
Q 006662 187 RFSFPGGGTMFPRGADAYIDDIGKLIN-LKDGSIRTAIDTGCGVASWGAYLMSRN-ILAVSFAPRDTHEAQVQFALER-- 262 (636)
Q Consensus 187 ~~~F~ggg~~f~~g~~~~id~L~~lL~-l~~g~~r~VLDIGCGtG~~a~~La~~~-v~vv~i~p~Dis~a~l~~A~er-- 262 (636)
.+..+.+. ......+.+.+.+.+.+. ..++ .+|||+|||+|.++..+++++ ..++++ |+++.+++.|+++
T Consensus 15 ~~~~~~~~-~~rp~~~~~~~~~~~~l~~~~~~--~~vLD~GcG~G~~~~~~~~~~~~~v~~v---D~~~~~~~~a~~~~~ 88 (187)
T 2fhp_A 15 RLKALDGD-NTRPTTDKVKESIFNMIGPYFDG--GMALDLYSGSGGLAIEAVSRGMDKSICI---EKNFAALKVIKENIA 88 (187)
T ss_dssp BCCCCCCC-SSCCCCHHHHHHHHHHHCSCCSS--CEEEETTCTTCHHHHHHHHTTCSEEEEE---ESCHHHHHHHHHHHH
T ss_pred cccCCCCC-CcCcCHHHHHHHHHHHHHhhcCC--CCEEEeCCccCHHHHHHHHcCCCEEEEE---ECCHHHHHHHHHHHH
Confidence 34444333 233445666777777764 2233 489999999999999988875 466666 8898998888654
Q ss_pred --CC--CeEEEEeccccC----CCCCCCeeEEEecccccccccChHHHHHHH--HhcccCCcEEEEEeC
Q 006662 263 --GV--PALIGVMASIRL----PYPSRAFDMAHCSRCLIPWGQYDGLYLIEV--DRVLRPGGYWILSGP 321 (636)
Q Consensus 263 --g~--~~~~~~~d~~~L----pf~~~sFDlV~~s~~L~h~~~d~~~~L~el--~RvLKPGG~Liis~p 321 (636)
+. .+.+...|.... ++++++||+|+++..+ + .......+..+ .++|+|||++++..+
T Consensus 89 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~~~~~-~-~~~~~~~~~~l~~~~~L~~gG~l~~~~~ 155 (187)
T 2fhp_A 89 ITKEPEKFEVRKMDANRALEQFYEEKLQFDLVLLDPPY-A-KQEIVSQLEKMLERQLLTNEAVIVCETD 155 (187)
T ss_dssp HHTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEECCCG-G-GCCHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred HhCCCcceEEEECcHHHHHHHHHhcCCCCCEEEECCCC-C-chhHHHHHHHHHHhcccCCCCEEEEEeC
Confidence 32 477888876552 2236789999998765 3 23556777777 899999999999875
No 112
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.11 E-value=5.5e-10 Score=120.01 Aligned_cols=152 Identities=12% Similarity=0.067 Sum_probs=102.9
Q ss_pred CCCcccHHHHHHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhc--CCEEEEcCcCCchHHHHHHHHHc----CC----
Q 006662 195 TMFPRGADAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR--NILAVSFAPRDTHEAQVQFALER----GV---- 264 (636)
Q Consensus 195 ~~f~~g~~~~id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~--~v~vv~i~p~Dis~a~l~~A~er----g~---- 264 (636)
.+.....+...+.+.+.++...+ .+|||+|||+|.++..++++ +..++++ |+++.+++.++++ +.
T Consensus 201 ~Fs~~~~d~~~~~ll~~l~~~~~--~~VLDlGcG~G~~s~~la~~~p~~~V~gv---D~s~~al~~Ar~n~~~ngl~~~~ 275 (375)
T 4dcm_A 201 VFSRTGLDIGARFFMQHLPENLE--GEIVDLGCGNGVIGLTLLDKNPQAKVVFV---DESPMAVASSRLNVETNMPEALD 275 (375)
T ss_dssp CTTCSSCCHHHHHHHHTCCCSCC--SEEEEETCTTCHHHHHHHHHCTTCEEEEE---ESCHHHHHHHHHHHHHHCGGGGG
T ss_pred cccCCcccHHHHHHHHhCcccCC--CeEEEEeCcchHHHHHHHHHCCCCEEEEE---ECcHHHHHHHHHHHHHcCCCcCc
Confidence 33333445555566777665444 48999999999999999998 5667777 8899999888754 32
Q ss_pred CeEEEEeccccCCCCCCCeeEEEeccccccc--c-cCh-HHHHHHHHhcccCCcEEEEEeCCCCccccccCCCCchhhhH
Q 006662 265 PALIGVMASIRLPYPSRAFDMAHCSRCLIPW--G-QYD-GLYLIEVDRVLRPGGYWILSGPPVNWESHWKGWNRTTEDLK 340 (636)
Q Consensus 265 ~~~~~~~d~~~Lpf~~~sFDlV~~s~~L~h~--~-~d~-~~~L~el~RvLKPGG~Liis~p~~~w~~~~~~W~~t~e~l~ 340 (636)
.+.+...|... ++++++||+|+++..+++. . ... ..++.++.++|||||.++++.+... .+
T Consensus 276 ~v~~~~~D~~~-~~~~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n~~~-------------~~- 340 (375)
T 4dcm_A 276 RCEFMINNALS-GVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHL-------------DY- 340 (375)
T ss_dssp GEEEEECSTTT-TCCTTCEEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEEEETTS-------------CH-
T ss_pred eEEEEechhhc-cCCCCCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEECCc-------------CH-
Confidence 36777777765 5677899999999887432 1 122 4689999999999999999864211 01
Q ss_pred HHHHHHHHHHHHhceEeecccccEEEEeCC
Q 006662 341 SEQNGIETIARSLCWKKLIQKKDLAIWQKP 370 (636)
Q Consensus 341 ~~~~~ie~la~~l~Wk~v~~~~~~aIWqKp 370 (636)
...+++.+. ..+.+.+.....|.+..
T Consensus 341 --~~~l~~~fg--~~~~~a~~~~F~V~~~~ 366 (375)
T 4dcm_A 341 --FHKLKKIFG--NCTTIATNNKFVVLKAV 366 (375)
T ss_dssp --HHHHHHHHS--CCEEEEECSSEEEEEEE
T ss_pred --HHHHHHhcC--CEEEEeeCCCEEEEEEc
Confidence 122334443 35666666666666543
No 113
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.11 E-value=7.3e-11 Score=127.68 Aligned_cols=118 Identities=14% Similarity=0.122 Sum_probs=91.5
Q ss_pred CcccHHHHHHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhc-CC-EEEEcCcCCchHHHHHHHHHc-----------C
Q 006662 197 FPRGADAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR-NI-LAVSFAPRDTHEAQVQFALER-----------G 263 (636)
Q Consensus 197 f~~g~~~~id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~-~v-~vv~i~p~Dis~a~l~~A~er-----------g 263 (636)
+.+.....+..+.+.+.+.++. +|||||||+|.++..++.. +. .++++ |+++.+++.|+++ +
T Consensus 154 YGEt~~~~i~~il~~l~l~~gd--~VLDLGCGtG~l~l~lA~~~g~~kVvGI---DiS~~~lelAr~n~e~frkr~~~~G 228 (438)
T 3uwp_A 154 YGETSFDLVAQMIDEIKMTDDD--LFVDLGSGVGQVVLQVAAATNCKHHYGV---EKADIPAKYAETMDREFRKWMKWYG 228 (438)
T ss_dssp GGGTHHHHHHHHHHHHCCCTTC--EEEEESCTTSHHHHHHHHHCCCSEEEEE---ECCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cCCCCHHHHHHHHHhcCCCCCC--EEEEeCCCCCHHHHHHHHHCCCCEEEEE---eCCHHHHHHHHHHHHHHHHHHHHhC
Confidence 4455666777788887777766 9999999999999999865 44 36666 8888777776531 3
Q ss_pred ---CCeEEEEeccccCCCCC--CCeeEEEecccccccccChHHHHHHHHhcccCCcEEEEEeC
Q 006662 264 ---VPALIGVMASIRLPYPS--RAFDMAHCSRCLIPWGQYDGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 264 ---~~~~~~~~d~~~Lpf~~--~sFDlV~~s~~L~h~~~d~~~~L~el~RvLKPGG~Liis~p 321 (636)
.++.+..+|+..+|+.+ ..||+|+++..+ + .++....|.++.|+|||||.|++..+
T Consensus 229 l~~~rVefi~GD~~~lp~~d~~~~aDVVf~Nn~~-F-~pdl~~aL~Ei~RvLKPGGrIVssE~ 289 (438)
T 3uwp_A 229 KKHAEYTLERGDFLSEEWRERIANTSVIFVNNFA-F-GPEVDHQLKERFANMKEGGRIVSSKP 289 (438)
T ss_dssp BCCCEEEEEECCTTSHHHHHHHHTCSEEEECCTT-C-CHHHHHHHHHHHTTSCTTCEEEESSC
T ss_pred CCCCCeEEEECcccCCccccccCCccEEEEcccc-c-CchHHHHHHHHHHcCCCCcEEEEeec
Confidence 35889999998888754 479999998765 3 34668889999999999999998754
No 114
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.11 E-value=7.6e-10 Score=118.13 Aligned_cols=108 Identities=17% Similarity=0.183 Sum_probs=83.3
Q ss_pred HHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhc--CCEEEEcCcCCchHHHHHHHHHc----C--CCeEEEEeccccCC
Q 006662 206 DDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR--NILAVSFAPRDTHEAQVQFALER----G--VPALIGVMASIRLP 277 (636)
Q Consensus 206 d~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~--~v~vv~i~p~Dis~a~l~~A~er----g--~~~~~~~~d~~~Lp 277 (636)
..+.+.++... ..+|||||||+|.++..++++ +..++.+ |+ +.+++.|+++ + ..+.+...|.. .+
T Consensus 192 ~~l~~~~~~~~--~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~---D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~-~~ 264 (369)
T 3gwz_A 192 GQVAAAYDFSG--AATAVDIGGGRGSLMAAVLDAFPGLRGTLL---ER-PPVAEEARELLTGRGLADRCEILPGDFF-ET 264 (369)
T ss_dssp HHHHHHSCCTT--CSEEEEETCTTSHHHHHHHHHCTTCEEEEE---EC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-TC
T ss_pred HHHHHhCCCcc--CcEEEEeCCCccHHHHHHHHHCCCCeEEEE---cC-HHHHHHHHHhhhhcCcCCceEEeccCCC-CC
Confidence 34444444333 359999999999999999987 5566666 88 7888777653 3 35888888876 56
Q ss_pred CCCCCeeEEEecccccccccCh-HHHHHHHHhcccCCcEEEEEeC
Q 006662 278 YPSRAFDMAHCSRCLIPWGQYD-GLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 278 f~~~sFDlV~~s~~L~h~~~d~-~~~L~el~RvLKPGG~Liis~p 321 (636)
++. .||+|++..++++|.+.. ..+|+++.++|||||++++..+
T Consensus 265 ~p~-~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~ 308 (369)
T 3gwz_A 265 IPD-GADVYLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVIDN 308 (369)
T ss_dssp CCS-SCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEE
T ss_pred CCC-CceEEEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 666 899999999997775332 4799999999999999999864
No 115
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.10 E-value=2.6e-10 Score=120.73 Aligned_cols=111 Identities=14% Similarity=0.128 Sum_probs=82.8
Q ss_pred HHHHHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhcCC-EEEEcCcCCchHHHHHHHHHc----C--CCeEEEEeccc
Q 006662 202 DAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNI-LAVSFAPRDTHEAQVQFALER----G--VPALIGVMASI 274 (636)
Q Consensus 202 ~~~id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~~v-~vv~i~p~Dis~a~l~~A~er----g--~~~~~~~~d~~ 274 (636)
..+.+.+.+.+...++. +|||||||+|.++..+++.+. .++++ |+++ +++.|+++ + ..+.+..++..
T Consensus 50 ~~~~~~i~~~~~~~~~~--~VLDiGcGtG~ls~~la~~g~~~v~gv---D~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~ 123 (340)
T 2fyt_A 50 ESYRDFIYQNPHIFKDK--VVLDVGCGTGILSMFAAKAGAKKVLGV---DQSE-ILYQAMDIIRLNKLEDTITLIKGKIE 123 (340)
T ss_dssp HHHHHHHHHCGGGTTTC--EEEEETCTTSHHHHHHHHTTCSEEEEE---ESST-HHHHHHHHHHHTTCTTTEEEEESCTT
T ss_pred HHHHHHHHhhhhhcCCC--EEEEeeccCcHHHHHHHHcCCCEEEEE---ChHH-HHHHHHHHHHHcCCCCcEEEEEeeHH
Confidence 44555666665555555 999999999999999999864 56666 6664 66666543 3 35888999999
Q ss_pred cCCCCCCCeeEEEeccccc--ccccChHHHHHHHHhcccCCcEEEE
Q 006662 275 RLPYPSRAFDMAHCSRCLI--PWGQYDGLYLIEVDRVLRPGGYWIL 318 (636)
Q Consensus 275 ~Lpf~~~sFDlV~~s~~L~--h~~~d~~~~L~el~RvLKPGG~Lii 318 (636)
.+++++++||+|++..+.. +...+...++.++.|+|||||.++.
T Consensus 124 ~~~~~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 169 (340)
T 2fyt_A 124 EVHLPVEKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVYP 169 (340)
T ss_dssp TSCCSCSCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEES
T ss_pred HhcCCCCcEEEEEEcCchhhccCHHHHHHHHHHHHhhcCCCcEEEc
Confidence 9998888999999876321 2233447899999999999999983
No 116
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.09 E-value=5.6e-10 Score=116.21 Aligned_cols=101 Identities=12% Similarity=0.081 Sum_probs=80.0
Q ss_pred HhhccCCCCCcEEEEeCCCCcHHHHH-Hhhc-CCEEEEcCcCCchHHHHHHHHHc----CC-CeEEEEeccccCCCCCCC
Q 006662 210 KLINLKDGSIRTAIDTGCGVASWGAY-LMSR-NILAVSFAPRDTHEAQVQFALER----GV-PALIGVMASIRLPYPSRA 282 (636)
Q Consensus 210 ~lL~l~~g~~r~VLDIGCGtG~~a~~-La~~-~v~vv~i~p~Dis~a~l~~A~er----g~-~~~~~~~d~~~Lpf~~~s 282 (636)
.++.+.++. +|||||||+|.++.. +++. +..++++ |+++++++.|+++ +. ++.+..+|...++ +++
T Consensus 116 ~la~l~~g~--rVLDIGcG~G~~ta~~lA~~~ga~V~gI---Dis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~--d~~ 188 (298)
T 3fpf_A 116 ALGRFRRGE--RAVFIGGGPLPLTGILLSHVYGMRVNVV---EIEPDIAELSRKVIEGLGVDGVNVITGDETVID--GLE 188 (298)
T ss_dssp HHTTCCTTC--EEEEECCCSSCHHHHHHHHTTCCEEEEE---ESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGG--GCC
T ss_pred HHcCCCCcC--EEEEECCCccHHHHHHHHHccCCEEEEE---ECCHHHHHHHHHHHHhcCCCCeEEEECchhhCC--CCC
Confidence 445555555 999999999977654 4443 7777777 9999999998765 43 5788888888775 689
Q ss_pred eeEEEecccccccccChHHHHHHHHhcccCCcEEEEEeC
Q 006662 283 FDMAHCSRCLIPWGQYDGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 283 FDlV~~s~~L~h~~~d~~~~L~el~RvLKPGG~Liis~p 321 (636)
||+|++... .++...+++++.|+|||||.|++...
T Consensus 189 FDvV~~~a~----~~d~~~~l~el~r~LkPGG~Lvv~~~ 223 (298)
T 3fpf_A 189 FDVLMVAAL----AEPKRRVFRNIHRYVDTETRIIYRTY 223 (298)
T ss_dssp CSEEEECTT----CSCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred cCEEEECCC----ccCHHHHHHHHHHHcCCCcEEEEEcC
Confidence 999998553 35778999999999999999999864
No 117
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.09 E-value=3.5e-10 Score=116.61 Aligned_cols=99 Identities=12% Similarity=0.105 Sum_probs=76.7
Q ss_pred CcEEEEeCCCCcH----HHHHHhhc------CCEEEEcCcCCchHHHHHHHHHcC-------------------------
Q 006662 219 IRTAIDTGCGVAS----WGAYLMSR------NILAVSFAPRDTHEAQVQFALERG------------------------- 263 (636)
Q Consensus 219 ~r~VLDIGCGtG~----~a~~La~~------~v~vv~i~p~Dis~a~l~~A~erg------------------------- 263 (636)
..+|||+|||+|. ++..|++. +..++++ |+|+.+++.|+++.
T Consensus 106 ~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~at---Dis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~ 182 (274)
T 1af7_A 106 EYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFAS---DIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPH 182 (274)
T ss_dssp CEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEE---ESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTS
T ss_pred CcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEE---ECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCC
Confidence 3589999999997 56666654 2345555 99999999998641
Q ss_pred -----------CCeEEEEeccccCCCC-CCCeeEEEecccccccccCh-HHHHHHHHhcccCCcEEEEEe
Q 006662 264 -----------VPALIGVMASIRLPYP-SRAFDMAHCSRCLIPWGQYD-GLYLIEVDRVLRPGGYWILSG 320 (636)
Q Consensus 264 -----------~~~~~~~~d~~~Lpf~-~~sFDlV~~s~~L~h~~~d~-~~~L~el~RvLKPGG~Liis~ 320 (636)
..+.|...|....|++ .+.||+|+|..+++++.+.. ..++.++.+.|+|||+|++..
T Consensus 183 ~~~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~lg~ 252 (274)
T 1af7_A 183 EGLVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAGH 252 (274)
T ss_dssp CSEEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEECT
T ss_pred CCceeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEEEe
Confidence 1367788887776665 57899999999997775322 789999999999999999863
No 118
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.08 E-value=1.1e-09 Score=109.63 Aligned_cols=105 Identities=14% Similarity=0.158 Sum_probs=85.4
Q ss_pred HHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhc---CCEEEEcCcCCchHHHHHHHHHc-----C-CCeEEEEeccccC
Q 006662 206 DDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR---NILAVSFAPRDTHEAQVQFALER-----G-VPALIGVMASIRL 276 (636)
Q Consensus 206 d~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~---~v~vv~i~p~Dis~a~l~~A~er-----g-~~~~~~~~d~~~L 276 (636)
..+.+.+...++. +|||+|||+|.++..+++. +..++.+ |+++.+++.|+++ + ..+.+...|....
T Consensus 86 ~~~~~~~~~~~~~--~vLdiG~G~G~~~~~l~~~~~~~~~v~~~---D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~ 160 (258)
T 2pwy_A 86 SAMVTLLDLAPGM--RVLEAGTGSGGLTLFLARAVGEKGLVESY---EARPHHLAQAERNVRAFWQVENVRFHLGKLEEA 160 (258)
T ss_dssp HHHHHHTTCCTTC--EEEEECCTTSHHHHHHHHHHCTTSEEEEE---ESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGC
T ss_pred HHHHHHcCCCCCC--EEEEECCCcCHHHHHHHHHhCCCCEEEEE---eCCHHHHHHHHHHHHHhcCCCCEEEEECchhhc
Confidence 4556666655555 9999999999999999987 5667777 8899998888765 4 3578888888888
Q ss_pred CCCCCCeeEEEecccccccccChHHHHHHHHhcccCCcEEEEEeC
Q 006662 277 PYPSRAFDMAHCSRCLIPWGQYDGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 277 pf~~~sFDlV~~s~~L~h~~~d~~~~L~el~RvLKPGG~Liis~p 321 (636)
++++++||+|++. . +++..++.++.++|+|||++++..+
T Consensus 161 ~~~~~~~D~v~~~-----~-~~~~~~l~~~~~~L~~gG~l~~~~~ 199 (258)
T 2pwy_A 161 ELEEAAYDGVALD-----L-MEPWKVLEKAALALKPDRFLVAYLP 199 (258)
T ss_dssp CCCTTCEEEEEEE-----S-SCGGGGHHHHHHHEEEEEEEEEEES
T ss_pred CCCCCCcCEEEEC-----C-cCHHHHHHHHHHhCCCCCEEEEEeC
Confidence 8888899999983 2 3566899999999999999999976
No 119
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.08 E-value=5.5e-10 Score=109.05 Aligned_cols=115 Identities=10% Similarity=0.029 Sum_probs=85.8
Q ss_pred cHHHHHHHHHHhhccC-CCCCcEEEEeCCCCcHHHHHHhhcCC-EEEEcCcCCchHHHHHHHHHc----CC-CeEEEEec
Q 006662 200 GADAYIDDIGKLINLK-DGSIRTAIDTGCGVASWGAYLMSRNI-LAVSFAPRDTHEAQVQFALER----GV-PALIGVMA 272 (636)
Q Consensus 200 g~~~~id~L~~lL~l~-~g~~r~VLDIGCGtG~~a~~La~~~v-~vv~i~p~Dis~a~l~~A~er----g~-~~~~~~~d 272 (636)
..+...+.+.+.+... ++. +|||+|||+|.++..++.++. .++++ |+++.+++.|+++ +. ++.+...|
T Consensus 37 ~~~~~~~~l~~~l~~~~~~~--~vLDlgcG~G~~~~~l~~~~~~~V~~v---D~s~~~l~~a~~~~~~~~~~~v~~~~~D 111 (202)
T 2fpo_A 37 TTDRVRETLFNWLAPVIVDA--QCLDCFAGSGALGLEALSRYAAGATLI---EMDRAVSQQLIKNLATLKAGNARVVNSN 111 (202)
T ss_dssp -CHHHHHHHHHHHHHHHTTC--EEEETTCTTCHHHHHHHHTTCSEEEEE---CSCHHHHHHHHHHHHHTTCCSEEEECSC
T ss_pred CHHHHHHHHHHHHHhhcCCC--eEEEeCCCcCHHHHHHHhcCCCEEEEE---ECCHHHHHHHHHHHHHcCCCcEEEEECC
Confidence 3455556666666432 444 899999999999999888764 66667 9999999988754 33 67888888
Q ss_pred ccc-CCCCCCCeeEEEecccccccccChHHHHHHHHh--cccCCcEEEEEeC
Q 006662 273 SIR-LPYPSRAFDMAHCSRCLIPWGQYDGLYLIEVDR--VLRPGGYWILSGP 321 (636)
Q Consensus 273 ~~~-Lpf~~~sFDlV~~s~~L~h~~~d~~~~L~el~R--vLKPGG~Liis~p 321 (636)
... ++..+++||+|++...+ +. .....++.++.+ +|+|||+++++..
T Consensus 112 ~~~~~~~~~~~fD~V~~~~p~-~~-~~~~~~l~~l~~~~~L~pgG~l~i~~~ 161 (202)
T 2fpo_A 112 AMSFLAQKGTPHNIVFVDPPF-RR-GLLEETINLLEDNGWLADEALIYVESE 161 (202)
T ss_dssp HHHHHSSCCCCEEEEEECCSS-ST-TTHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred HHHHHhhcCCCCCEEEECCCC-CC-CcHHHHHHHHHhcCccCCCcEEEEEEC
Confidence 766 56667899999998764 32 355778888865 6999999999864
No 120
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.07 E-value=2e-10 Score=106.73 Aligned_cols=104 Identities=17% Similarity=0.167 Sum_probs=75.9
Q ss_pred HHHHHhhc-cCCCCCcEEEEeCCCCcHHHHHHhhc---CCEEEEcCcCCchHHHHHHHHHcCCCeEEEEeccccCC----
Q 006662 206 DDIGKLIN-LKDGSIRTAIDTGCGVASWGAYLMSR---NILAVSFAPRDTHEAQVQFALERGVPALIGVMASIRLP---- 277 (636)
Q Consensus 206 d~L~~lL~-l~~g~~r~VLDIGCGtG~~a~~La~~---~v~vv~i~p~Dis~a~l~~A~erg~~~~~~~~d~~~Lp---- 277 (636)
..+.+.+. ..++. +|||+|||+|.++..+++. +..++++ |+++ +++. ..+.+...|....+
T Consensus 11 ~~~~~~~~~~~~~~--~vLd~G~G~G~~~~~l~~~~~~~~~v~~~---D~~~-~~~~-----~~~~~~~~d~~~~~~~~~ 79 (180)
T 1ej0_A 11 DEIQQSDKLFKPGM--TVVDLGAAPGGWSQYVVTQIGGKGRIIAC---DLLP-MDPI-----VGVDFLQGDFRDELVMKA 79 (180)
T ss_dssp HHHHHHHCCCCTTC--EEEEESCTTCHHHHHHHHHHCTTCEEEEE---ESSC-CCCC-----TTEEEEESCTTSHHHHHH
T ss_pred HHHHHHhCCCCCCC--eEEEeCCCCCHHHHHHHHHhCCCCeEEEE---ECcc-cccc-----CcEEEEEcccccchhhhh
Confidence 34444443 33444 9999999999999999887 3455555 5554 3222 45778888887766
Q ss_pred ----CCCCCeeEEEecccccccccCh-----------HHHHHHHHhcccCCcEEEEEeC
Q 006662 278 ----YPSRAFDMAHCSRCLIPWGQYD-----------GLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 278 ----f~~~sFDlV~~s~~L~h~~~d~-----------~~~L~el~RvLKPGG~Liis~p 321 (636)
+++++||+|+++..+ ++.... ..++.++.++|+|||.+++..+
T Consensus 80 ~~~~~~~~~~D~i~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 137 (180)
T 1ej0_A 80 LLERVGDSKVQVVMSDMAP-NMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVF 137 (180)
T ss_dssp HHHHHTTCCEEEEEECCCC-CCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hhccCCCCceeEEEECCCc-cccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 677899999998877 444444 5889999999999999999865
No 121
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.07 E-value=1.4e-09 Score=107.87 Aligned_cols=90 Identities=8% Similarity=0.055 Sum_probs=72.6
Q ss_pred cEEEEeCCCCcHHHHHHhhc-C-CEEEEcCcCCchHHHHHHHHHcC---CCeEEEEecccc----CCCCCCCeeEEEecc
Q 006662 220 RTAIDTGCGVASWGAYLMSR-N-ILAVSFAPRDTHEAQVQFALERG---VPALIGVMASIR----LPYPSRAFDMAHCSR 290 (636)
Q Consensus 220 r~VLDIGCGtG~~a~~La~~-~-v~vv~i~p~Dis~a~l~~A~erg---~~~~~~~~d~~~----Lpf~~~sFDlV~~s~ 290 (636)
.+|||+|||+|.++..+++. + ..++++ |+++.+++.++++. .++.+...|... +++. ++||+|++
T Consensus 76 ~~VLDlGcG~G~~~~~la~~~~~~~v~gv---D~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~-~~~D~v~~-- 149 (230)
T 1fbn_A 76 SKILYLGASAGTTPSHVADIADKGIVYAI---EYAPRIMRELLDACAERENIIPILGDANKPQEYANIV-EKVDVIYE-- 149 (230)
T ss_dssp CEEEEESCCSSHHHHHHHHHTTTSEEEEE---ESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTS-CCEEEEEE--
T ss_pred CEEEEEcccCCHHHHHHHHHcCCcEEEEE---ECCHHHHHHHHHHhhcCCCeEEEECCCCCcccccccC-ccEEEEEE--
Confidence 48999999999999999987 3 566677 88999998876542 457788888776 6766 78999983
Q ss_pred cccccccCh---HHHHHHHHhcccCCcEEEEE
Q 006662 291 CLIPWGQYD---GLYLIEVDRVLRPGGYWILS 319 (636)
Q Consensus 291 ~L~h~~~d~---~~~L~el~RvLKPGG~Liis 319 (636)
+. .++ ..++.++.++|||||++++.
T Consensus 150 ---~~-~~~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 150 ---DV-AQPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp ---CC-CSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ---ec-CChhHHHHHHHHHHHhCCCCcEEEEE
Confidence 22 244 67899999999999999997
No 122
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.07 E-value=6.8e-10 Score=114.08 Aligned_cols=115 Identities=10% Similarity=-0.026 Sum_probs=84.8
Q ss_pred HHHHHHHHhhccCCCCCcEEEEeCCCC---cHHHHHHhhc--CCEEEEcCcCCchHHHHHHHHHcC---CCeEEEEeccc
Q 006662 203 AYIDDIGKLINLKDGSIRTAIDTGCGV---ASWGAYLMSR--NILAVSFAPRDTHEAQVQFALERG---VPALIGVMASI 274 (636)
Q Consensus 203 ~~id~L~~lL~l~~g~~r~VLDIGCGt---G~~a~~La~~--~v~vv~i~p~Dis~a~l~~A~erg---~~~~~~~~d~~ 274 (636)
.+++.+.+.+.... ...+|||||||+ |.++..+.+. +..++.+ |+++.+++.|+++. ..+.+..+|..
T Consensus 63 ~~~~~~~~~l~~~~-~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~v---D~sp~~l~~Ar~~~~~~~~v~~~~~D~~ 138 (274)
T 2qe6_A 63 KVLVRGVRFLAGEA-GISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYV---DIDPMVLTHGRALLAKDPNTAVFTADVR 138 (274)
T ss_dssp HHHHHHHHHHHTTT-CCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEE---ESSHHHHHHHHHHHTTCTTEEEEECCTT
T ss_pred HHHHHHHHHHhhcc-CCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEE---ECChHHHHHHHHhcCCCCCeEEEEeeCC
Confidence 34444445443222 235899999999 9887766654 5667777 88999999987653 35788888875
Q ss_pred cCC-----------CCCCCeeEEEecccccccccC-hHHHHHHHHhcccCCcEEEEEeC
Q 006662 275 RLP-----------YPSRAFDMAHCSRCLIPWGQY-DGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 275 ~Lp-----------f~~~sFDlV~~s~~L~h~~~d-~~~~L~el~RvLKPGG~Liis~p 321 (636)
..+ ++..+||+|+++.+++|+.++ ...+++++.++|||||+|+++..
T Consensus 139 ~~~~~~~~~~~~~~~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~ 197 (274)
T 2qe6_A 139 DPEYILNHPDVRRMIDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSL 197 (274)
T ss_dssp CHHHHHHSHHHHHHCCTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred CchhhhccchhhccCCCCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEe
Confidence 421 333589999999999666543 68999999999999999999975
No 123
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.07 E-value=1.2e-09 Score=110.93 Aligned_cols=106 Identities=17% Similarity=0.151 Sum_probs=85.6
Q ss_pred HHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhc---CCEEEEcCcCCchHHHHHHHHHc-----C---CCeEEEEecc
Q 006662 205 IDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR---NILAVSFAPRDTHEAQVQFALER-----G---VPALIGVMAS 273 (636)
Q Consensus 205 id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~---~v~vv~i~p~Dis~a~l~~A~er-----g---~~~~~~~~d~ 273 (636)
+..+.+.+...++. +|||+|||+|.++..+++. +..++.+ |+++.+++.|+++ + .++.+...|.
T Consensus 88 ~~~i~~~~~~~~~~--~vLdiG~G~G~~~~~l~~~~~~~~~v~~v---D~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~ 162 (280)
T 1i9g_A 88 AAQIVHEGDIFPGA--RVLEAGAGSGALTLSLLRAVGPAGQVISY---EQRADHAEHARRNVSGCYGQPPDNWRLVVSDL 162 (280)
T ss_dssp HHHHHHHTTCCTTC--EEEEECCTTSHHHHHHHHHHCTTSEEEEE---CSCHHHHHHHHHHHHHHHTSCCTTEEEECSCG
T ss_pred HHHHHHHcCCCCCC--EEEEEcccccHHHHHHHHHhCCCCEEEEE---eCCHHHHHHHHHHHHHhcCCCCCcEEEEECch
Confidence 34566666655555 9999999999999999986 5667777 8899998888754 3 3678888898
Q ss_pred ccCCCCCCCeeEEEecccccccccChHHHHHHHHhcccCCcEEEEEeC
Q 006662 274 IRLPYPSRAFDMAHCSRCLIPWGQYDGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 274 ~~Lpf~~~sFDlV~~s~~L~h~~~d~~~~L~el~RvLKPGG~Liis~p 321 (636)
...++++++||+|++.. .++..++.++.++|+|||++++..+
T Consensus 163 ~~~~~~~~~~D~v~~~~------~~~~~~l~~~~~~L~pgG~l~~~~~ 204 (280)
T 1i9g_A 163 ADSELPDGSVDRAVLDM------LAPWEVLDAVSRLLVAGGVLMVYVA 204 (280)
T ss_dssp GGCCCCTTCEEEEEEES------SCGGGGHHHHHHHEEEEEEEEEEES
T ss_pred HhcCCCCCceeEEEECC------cCHHHHHHHHHHhCCCCCEEEEEeC
Confidence 88888888999999832 2556899999999999999999976
No 124
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.06 E-value=7.1e-10 Score=117.77 Aligned_cols=111 Identities=13% Similarity=0.132 Sum_probs=82.4
Q ss_pred HHHHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhcCC-EEEEcCcCCchHHHHHHHHH----cCCC--eEEEEecccc
Q 006662 203 AYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNI-LAVSFAPRDTHEAQVQFALE----RGVP--ALIGVMASIR 275 (636)
Q Consensus 203 ~~id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~~v-~vv~i~p~Dis~a~l~~A~e----rg~~--~~~~~~d~~~ 275 (636)
.+.+.+.+.....++. +|||||||+|.++..+++.+. .++++ |+++ +++.|++ ++.. +.+..++...
T Consensus 53 ~~~~~i~~~~~~~~~~--~VLDvGcG~G~~~~~la~~g~~~v~gv---D~s~-~l~~a~~~~~~~~~~~~v~~~~~d~~~ 126 (349)
T 3q7e_A 53 TYRNSMFHNRHLFKDK--VVLDVGSGTGILCMFAAKAGARKVIGI---ECSS-ISDYAVKIVKANKLDHVVTIIKGKVEE 126 (349)
T ss_dssp HHHHHHHTCHHHHTTC--EEEEESCTTSHHHHHHHHTTCSEEEEE---ECST-HHHHHHHHHHHTTCTTTEEEEESCTTT
T ss_pred HHHHHHHhccccCCCC--EEEEEeccchHHHHHHHHCCCCEEEEE---CcHH-HHHHHHHHHHHcCCCCcEEEEECcHHH
Confidence 3444444433334444 899999999999999999854 66666 6663 6666553 3443 8999999999
Q ss_pred CCCCCCCeeEEEeccccc--ccccChHHHHHHHHhcccCCcEEEEE
Q 006662 276 LPYPSRAFDMAHCSRCLI--PWGQYDGLYLIEVDRVLRPGGYWILS 319 (636)
Q Consensus 276 Lpf~~~sFDlV~~s~~L~--h~~~d~~~~L~el~RvLKPGG~Liis 319 (636)
+++++++||+|++..+.. +.......++.++.|+|||||+++..
T Consensus 127 ~~~~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 172 (349)
T 3q7e_A 127 VELPVEKVDIIISEWMGYCLFYESMLNTVLHARDKWLAPDGLIFPD 172 (349)
T ss_dssp CCCSSSCEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred ccCCCCceEEEEEccccccccCchhHHHHHHHHHHhCCCCCEEccc
Confidence 999989999999965432 33456688999999999999999854
No 125
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.06 E-value=4.1e-10 Score=119.12 Aligned_cols=116 Identities=16% Similarity=0.119 Sum_probs=84.8
Q ss_pred ccHHHHHHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhcC--CEEEEcCcCCchHHHHHHHHHc----CCCeEEEEec
Q 006662 199 RGADAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRN--ILAVSFAPRDTHEAQVQFALER----GVPALIGVMA 272 (636)
Q Consensus 199 ~g~~~~id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~~--v~vv~i~p~Dis~a~l~~A~er----g~~~~~~~~d 272 (636)
...+...+.+.+.+....+ .+|||+|||+|.++..+++.+ ..++.+ |+++.+++.++++ +....+...|
T Consensus 179 ~~~d~~~~~ll~~l~~~~~--~~VLDlGcG~G~~~~~la~~~~~~~v~~v---D~s~~~l~~a~~~~~~~~~~~~~~~~d 253 (343)
T 2pjd_A 179 DGLDVGSQLLLSTLTPHTK--GKVLDVGCGAGVLSVAFARHSPKIRLTLC---DVSAPAVEASRATLAANGVEGEVFASN 253 (343)
T ss_dssp SSCCHHHHHHHHHSCTTCC--SBCCBTTCTTSHHHHHHHHHCTTCBCEEE---ESBHHHHHHHHHHHHHTTCCCEEEECS
T ss_pred CCCcHHHHHHHHhcCcCCC--CeEEEecCccCHHHHHHHHHCCCCEEEEE---ECCHHHHHHHHHHHHHhCCCCEEEEcc
Confidence 3344455566666643333 389999999999999999874 344555 8888888887654 4556666666
Q ss_pred cccCCCCCCCeeEEEeccccccc----ccChHHHHHHHHhcccCCcEEEEEeC
Q 006662 273 SIRLPYPSRAFDMAHCSRCLIPW----GQYDGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 273 ~~~Lpf~~~sFDlV~~s~~L~h~----~~d~~~~L~el~RvLKPGG~Liis~p 321 (636)
... +.+++||+|+++..+++. ..+...+++++.++|||||.+++..+
T Consensus 254 ~~~--~~~~~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 304 (343)
T 2pjd_A 254 VFS--EVKGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVAN 304 (343)
T ss_dssp TTT--TCCSCEEEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred ccc--cccCCeeEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEc
Confidence 544 346799999999888431 22347899999999999999999865
No 126
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.06 E-value=1.5e-09 Score=110.00 Aligned_cols=118 Identities=18% Similarity=0.064 Sum_probs=86.9
Q ss_pred CCcEEEEeCCCCcHHHHHHhhc--CCEEEEcCcCCchHHHHHHHHHc----CC-CeEEEEeccccCCCC---CCCeeEEE
Q 006662 218 SIRTAIDTGCGVASWGAYLMSR--NILAVSFAPRDTHEAQVQFALER----GV-PALIGVMASIRLPYP---SRAFDMAH 287 (636)
Q Consensus 218 ~~r~VLDIGCGtG~~a~~La~~--~v~vv~i~p~Dis~a~l~~A~er----g~-~~~~~~~d~~~Lpf~---~~sFDlV~ 287 (636)
...+|||||||+|..+..++.. +..++.+ |+++.++++++++ +. ++.+..++...++.. .++||+|+
T Consensus 80 ~~~~vLDiG~G~G~~~i~la~~~~~~~v~~v---D~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~ 156 (249)
T 3g89_A 80 GPLRVLDLGTGAGFPGLPLKIVRPELELVLV---DATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAV 156 (249)
T ss_dssp SSCEEEEETCTTTTTHHHHHHHCTTCEEEEE---ESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEE
T ss_pred CCCEEEEEcCCCCHHHHHHHHHCCCCEEEEE---ECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEEE
Confidence 3459999999999999999876 5566677 8899999888754 44 488888888877653 47899999
Q ss_pred ecccccccccChHHHHHHHHhcccCCcEEEEEeCCCCccccccCCCCchhhhHHHHHHHHHHHHHhceEee
Q 006662 288 CSRCLIPWGQYDGLYLIEVDRVLRPGGYWILSGPPVNWESHWKGWNRTTEDLKSEQNGIETIARSLCWKKL 358 (636)
Q Consensus 288 ~s~~L~h~~~d~~~~L~el~RvLKPGG~Liis~p~~~w~~~~~~W~~t~e~l~~~~~~ie~la~~l~Wk~v 358 (636)
+..+ .+...++.++.++|||||+|++.... ...++ ...+...++.++++..
T Consensus 157 s~a~-----~~~~~ll~~~~~~LkpgG~l~~~~g~-----------~~~~e----~~~~~~~l~~~G~~~~ 207 (249)
T 3g89_A 157 ARAV-----APLCVLSELLLPFLEVGGAAVAMKGP-----------RVEEE----LAPLPPALERLGGRLG 207 (249)
T ss_dssp EESS-----CCHHHHHHHHGGGEEEEEEEEEEECS-----------CCHHH----HTTHHHHHHHHTEEEE
T ss_pred ECCc-----CCHHHHHHHHHHHcCCCeEEEEEeCC-----------CcHHH----HHHHHHHHHHcCCeEE
Confidence 9543 24578999999999999999886421 11222 2335556667788654
No 127
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.06 E-value=1.6e-10 Score=109.31 Aligned_cols=114 Identities=13% Similarity=0.070 Sum_probs=81.4
Q ss_pred HHHHHHHHHHhhc-cCCCCCcEEEEeCCCCcHHHHHHhhcC-CEEEEcCcCCchHHHHHHHHHc----CC--CeEEEEec
Q 006662 201 ADAYIDDIGKLIN-LKDGSIRTAIDTGCGVASWGAYLMSRN-ILAVSFAPRDTHEAQVQFALER----GV--PALIGVMA 272 (636)
Q Consensus 201 ~~~~id~L~~lL~-l~~g~~r~VLDIGCGtG~~a~~La~~~-v~vv~i~p~Dis~a~l~~A~er----g~--~~~~~~~d 272 (636)
.+...+.+.+.+. ...+ .+|||+|||+|.++..+++++ ..++++ |+++.+++.|+++ +. .+.+...|
T Consensus 15 ~~~~~~~~~~~l~~~~~~--~~vLDlGcG~G~~~~~l~~~~~~~v~~v---D~~~~~~~~a~~~~~~~~~~~~~~~~~~d 89 (177)
T 2esr_A 15 SDKVRGAIFNMIGPYFNG--GRVLDLFAGSGGLAIEAVSRGMSAAVLV---EKNRKAQAIIQDNIIMTKAENRFTLLKME 89 (177)
T ss_dssp ---CHHHHHHHHCSCCCS--CEEEEETCTTCHHHHHHHHTTCCEEEEE---CCCHHHHHHHHHHHHTTTCGGGEEEECSC
T ss_pred HHHHHHHHHHHHHhhcCC--CeEEEeCCCCCHHHHHHHHcCCCEEEEE---ECCHHHHHHHHHHHHHcCCCCceEEEECc
Confidence 3444555666654 3333 489999999999999999885 466677 8999999988754 22 36777777
Q ss_pred ccc-CCCCCCCeeEEEecccccccccChHHHHHHHH--hcccCCcEEEEEeC
Q 006662 273 SIR-LPYPSRAFDMAHCSRCLIPWGQYDGLYLIEVD--RVLRPGGYWILSGP 321 (636)
Q Consensus 273 ~~~-Lpf~~~sFDlV~~s~~L~h~~~d~~~~L~el~--RvLKPGG~Liis~p 321 (636)
... ++..++.||+|+++..+ +. ......+..+. ++|+|||++++..+
T Consensus 90 ~~~~~~~~~~~fD~i~~~~~~-~~-~~~~~~~~~l~~~~~L~~gG~l~~~~~ 139 (177)
T 2esr_A 90 AERAIDCLTGRFDLVFLDPPY-AK-ETIVATIEALAAKNLLSEQVMVVCETD 139 (177)
T ss_dssp HHHHHHHBCSCEEEEEECCSS-HH-HHHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred HHHhHHhhcCCCCEEEECCCC-Cc-chHHHHHHHHHhCCCcCCCcEEEEEEC
Confidence 665 34445679999998655 22 23356777776 99999999999865
No 128
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.06 E-value=2.9e-10 Score=107.78 Aligned_cols=112 Identities=14% Similarity=0.032 Sum_probs=83.5
Q ss_pred CcEEEEeCCCCcHHHHHHhhcCCEEEEcCcCCchHHHHHHHHHcCC-CeEEEEeccccCCC---CCCCeeEEEecccccc
Q 006662 219 IRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALERGV-PALIGVMASIRLPY---PSRAFDMAHCSRCLIP 294 (636)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~~v~vv~i~p~Dis~a~l~~A~erg~-~~~~~~~d~~~Lpf---~~~sFDlV~~s~~L~h 294 (636)
+.+|||||||. + .+ |+++.|++.|+++.. .+.+.++|...+++ ++++||+|+|+.+++|
T Consensus 13 g~~vL~~~~g~-----------v---~v---D~s~~ml~~a~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V~~~~~l~~ 75 (176)
T 2ld4_A 13 GQFVAVVWDKS-----------S---PV---EALKGLVDKLQALTGNEGRVSVENIKQLLQSAHKESSFDIILSGLVPGS 75 (176)
T ss_dssp TSEEEEEECTT-----------S---CH---HHHHHHHHHHHHHTTTTSEEEEEEGGGGGGGCCCSSCEEEEEECCSTTC
T ss_pred CCEEEEecCCc-----------e---ee---eCCHHHHHHHHHhcccCcEEEEechhcCccccCCCCCEeEEEECChhhh
Confidence 34999999996 1 23 999999999987743 47888899988887 7899999999999966
Q ss_pred cccChHHHHHHHHhcccCCcEEEEEeCCCCccccccCCCCchhhhHHHHHHHHHHHHHhce
Q 006662 295 WGQYDGLYLIEVDRVLRPGGYWILSGPPVNWESHWKGWNRTTEDLKSEQNGIETIARSLCW 355 (636)
Q Consensus 295 ~~~d~~~~L~el~RvLKPGG~Liis~p~~~w~~~~~~W~~t~e~l~~~~~~ie~la~~l~W 355 (636)
+..+...+++++.|+|||||+|++..+....... ..|..+ .+++.++++..+|
T Consensus 76 ~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~-~~~~~~-------~~~~~~~l~~aGf 128 (176)
T 2ld4_A 76 TTLHSAEILAEIARILRPGGCLFLKEPVETAVDN-NSKVKT-------ASKLCSALTLSGL 128 (176)
T ss_dssp CCCCCHHHHHHHHHHEEEEEEEEEEEEEESSSCS-SSSSCC-------HHHHHHHHHHTTC
T ss_pred cccCHHHHHHHHHHHCCCCEEEEEEccccccccc-ccccCC-------HHHHHHHHHHCCC
Confidence 5367899999999999999999997652211110 112222 2445666777777
No 129
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.06 E-value=5.3e-10 Score=110.33 Aligned_cols=94 Identities=7% Similarity=-0.018 Sum_probs=68.2
Q ss_pred cEEEEeCCCCcHHHHHHhhcC--CEEEEcCcCCchHHHH----HHHHHcCCCeEEEEeccccC----CCCCCCeeEEEec
Q 006662 220 RTAIDTGCGVASWGAYLMSRN--ILAVSFAPRDTHEAQV----QFALERGVPALIGVMASIRL----PYPSRAFDMAHCS 289 (636)
Q Consensus 220 r~VLDIGCGtG~~a~~La~~~--v~vv~i~p~Dis~a~l----~~A~erg~~~~~~~~d~~~L----pf~~~sFDlV~~s 289 (636)
.+|||+|||+|.++..+++.. ..++++ |+++.++ +.++++ .++.+...|.... +++ ++||+|+++
T Consensus 59 ~~VLDlGcGtG~~~~~la~~~~~~~V~gv---D~s~~~l~~~~~~a~~~-~~v~~~~~d~~~~~~~~~~~-~~fD~V~~~ 133 (210)
T 1nt2_A 59 ERVLYLGAASGTTVSHLADIVDEGIIYAV---EYSAKPFEKLLELVRER-NNIIPLLFDASKPWKYSGIV-EKVDLIYQD 133 (210)
T ss_dssp CEEEEETCTTSHHHHHHHHHTTTSEEEEE---CCCHHHHHHHHHHHHHC-SSEEEECSCTTCGGGTTTTC-CCEEEEEEC
T ss_pred CEEEEECCcCCHHHHHHHHHcCCCEEEEE---ECCHHHHHHHHHHHhcC-CCeEEEEcCCCCchhhcccc-cceeEEEEe
Confidence 499999999999999998863 456666 8888654 444433 3566666676552 444 789999997
Q ss_pred ccccccccChHHHHHHHHhcccCCcEEEEEeC
Q 006662 290 RCLIPWGQYDGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 290 ~~L~h~~~d~~~~L~el~RvLKPGG~Liis~p 321 (636)
. . ...+...++.++.|+|||||+|+++.+
T Consensus 134 ~-~--~~~~~~~~l~~~~r~LkpgG~l~i~~~ 162 (210)
T 1nt2_A 134 I-A--QKNQIEILKANAEFFLKEKGEVVIMVK 162 (210)
T ss_dssp C-C--STTHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred c-c--ChhHHHHHHHHHHHHhCCCCEEEEEEe
Confidence 3 2 122234569999999999999999853
No 130
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.06 E-value=4.7e-10 Score=118.23 Aligned_cols=159 Identities=14% Similarity=0.118 Sum_probs=101.1
Q ss_pred HHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhc--CCEEEEcCcCCchHHHHHHHHHc----CC--CeEEEEeccccCC-
Q 006662 207 DIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR--NILAVSFAPRDTHEAQVQFALER----GV--PALIGVMASIRLP- 277 (636)
Q Consensus 207 ~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~--~v~vv~i~p~Dis~a~l~~A~er----g~--~~~~~~~d~~~Lp- 277 (636)
.+.+.++..+ ...+|||||||+|.++..++++ +..++.+ |+ +.+++.++++ +. .+.+..+|....+
T Consensus 169 ~~l~~~~~~~-~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~---D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 243 (352)
T 3mcz_A 169 DVVSELGVFA-RARTVIDLAGGHGTYLAQVLRRHPQLTGQIW---DL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARN 243 (352)
T ss_dssp HHHHTCGGGT-TCCEEEEETCTTCHHHHHHHHHCTTCEEEEE---EC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGG
T ss_pred HHHHhCCCcC-CCCEEEEeCCCcCHHHHHHHHhCCCCeEEEE---EC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcc
Confidence 3444444444 1359999999999999999987 4566666 55 3455555432 33 4788888877765
Q ss_pred CCCCCeeEEEecccccccccCh-HHHHHHHHhcccCCcEEEEEeCCCCccccccCCCCch----------hhhHHHHHHH
Q 006662 278 YPSRAFDMAHCSRCLIPWGQYD-GLYLIEVDRVLRPGGYWILSGPPVNWESHWKGWNRTT----------EDLKSEQNGI 346 (636)
Q Consensus 278 f~~~sFDlV~~s~~L~h~~~d~-~~~L~el~RvLKPGG~Liis~p~~~w~~~~~~W~~t~----------e~l~~~~~~i 346 (636)
+..+.||+|++..++++|.+.. ..+++++.++|||||++++..+...-... ..+.... .......+++
T Consensus 244 ~~~~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~t~~e~ 322 (352)
T 3mcz_A 244 FEGGAADVVMLNDCLHYFDAREAREVIGHAAGLVKPGGALLILTMTMNDDRV-TPALSADFSLHMMVNTNHGELHPTPWI 322 (352)
T ss_dssp GTTCCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCCTTSS-SSHHHHHHHHHHHHHSTTCCCCCHHHH
T ss_pred cCCCCccEEEEecccccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCC-CCchHHHhhHHHHhhCCCCCcCCHHHH
Confidence 2345699999999998876322 78999999999999999998642111000 0000000 0001124557
Q ss_pred HHHHHHhceEeeccc---ccEEEEeCCC
Q 006662 347 ETIARSLCWKKLIQK---KDLAIWQKPT 371 (636)
Q Consensus 347 e~la~~l~Wk~v~~~---~~~aIWqKp~ 371 (636)
+++++..+|+.+... ..+.+-+||.
T Consensus 323 ~~ll~~aGf~~~~~~~g~~~l~~a~kp~ 350 (352)
T 3mcz_A 323 AGVVRDAGLAVGERSIGRYTLLIGQRSS 350 (352)
T ss_dssp HHHHHHTTCEEEEEEETTEEEEEEECCC
T ss_pred HHHHHHCCCceeeeccCceEEEEEecCC
Confidence 788889999877521 1245556663
No 131
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.06 E-value=3.9e-10 Score=118.11 Aligned_cols=97 Identities=19% Similarity=0.223 Sum_probs=79.0
Q ss_pred CcEEEEeCCCCcHHHHHHhhc--CCEEEEcCcCCchHHHHHHHHHc----C--CCeEEEEeccccCCCCCCCeeEEEecc
Q 006662 219 IRTAIDTGCGVASWGAYLMSR--NILAVSFAPRDTHEAQVQFALER----G--VPALIGVMASIRLPYPSRAFDMAHCSR 290 (636)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~--~v~vv~i~p~Dis~a~l~~A~er----g--~~~~~~~~d~~~Lpf~~~sFDlV~~s~ 290 (636)
..+|||||||+|.++..++++ +..++.+ |+ +.+++.|+++ + ..+.+...|.. .+++. +||+|++..
T Consensus 170 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~---D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~~p~-~~D~v~~~~ 243 (332)
T 3i53_A 170 LGHVVDVGGGSGGLLSALLTAHEDLSGTVL---DL-QGPASAAHRRFLDTGLSGRAQVVVGSFF-DPLPA-GAGGYVLSA 243 (332)
T ss_dssp GSEEEEETCTTSHHHHHHHHHCTTCEEEEE---EC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-SCCCC-SCSEEEEES
T ss_pred CCEEEEeCCChhHHHHHHHHHCCCCeEEEe---cC-HHHHHHHHHhhhhcCcCcCeEEecCCCC-CCCCC-CCcEEEEeh
Confidence 459999999999999999986 4566666 88 7888777653 3 35888888876 56665 899999999
Q ss_pred cccccccCh-HHHHHHHHhcccCCcEEEEEeC
Q 006662 291 CLIPWGQYD-GLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 291 ~L~h~~~d~-~~~L~el~RvLKPGG~Liis~p 321 (636)
++++|.++. ..+++++.++|||||++++..+
T Consensus 244 vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 275 (332)
T 3i53_A 244 VLHDWDDLSAVAILRRCAEAAGSGGVVLVIEA 275 (332)
T ss_dssp CGGGSCHHHHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred hhccCCHHHHHHHHHHHHHhcCCCCEEEEEee
Confidence 998886432 7899999999999999999875
No 132
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.05 E-value=2.2e-09 Score=109.64 Aligned_cols=114 Identities=14% Similarity=0.133 Sum_probs=83.4
Q ss_pred HHHHHHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhc--CCEEEEcCcCCchHHHHHHHHHc----CC-CeEEEEecc
Q 006662 201 ADAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR--NILAVSFAPRDTHEAQVQFALER----GV-PALIGVMAS 273 (636)
Q Consensus 201 ~~~~id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~--~v~vv~i~p~Dis~a~l~~A~er----g~-~~~~~~~d~ 273 (636)
.+..++.+.+.+. .+ ..+|||+|||+|.++..+++. +..++++ |+++.+++.++++ +. ++.+...|.
T Consensus 95 te~l~~~~l~~~~-~~--~~~vLDlG~GsG~~~~~la~~~~~~~v~~v---D~s~~~l~~a~~n~~~~~~~~v~~~~~d~ 168 (276)
T 2b3t_A 95 TECLVEQALARLP-EQ--PCRILDLGTGTGAIALALASERPDCEIIAV---DRMPDAVSLAQRNAQHLAIKNIHILQSDW 168 (276)
T ss_dssp HHHHHHHHHHHSC-SS--CCEEEEETCTTSHHHHHHHHHCTTSEEEEE---CSSHHHHHHHHHHHHHHTCCSEEEECCST
T ss_pred HHHHHHHHHHhcc-cC--CCEEEEecCCccHHHHHHHHhCCCCEEEEE---ECCHHHHHHHHHHHHHcCCCceEEEEcch
Confidence 4556666666654 23 348999999999999999975 5566666 8999999888755 43 477887776
Q ss_pred ccCCCCCCCeeEEEeccccccc-------------c-----------cChHHHHHHHHhcccCCcEEEEEeC
Q 006662 274 IRLPYPSRAFDMAHCSRCLIPW-------------G-----------QYDGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 274 ~~Lpf~~~sFDlV~~s~~L~h~-------------~-----------~d~~~~L~el~RvLKPGG~Liis~p 321 (636)
.. ++++++||+|+++..++.. + .....++.++.++|||||++++..+
T Consensus 169 ~~-~~~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~ 239 (276)
T 2b3t_A 169 FS-ALAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHG 239 (276)
T ss_dssp TG-GGTTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECC
T ss_pred hh-hcccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 55 3446789999998543221 1 1226788999999999999999853
No 133
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.05 E-value=7.3e-10 Score=117.99 Aligned_cols=98 Identities=13% Similarity=0.168 Sum_probs=80.2
Q ss_pred CcEEEEeCCCCcHHHHHHhhc--CCEEEEcCcCCchHHHHHHHHHc----C--CCeEEEEeccccC--CCCCCCeeEEEe
Q 006662 219 IRTAIDTGCGVASWGAYLMSR--NILAVSFAPRDTHEAQVQFALER----G--VPALIGVMASIRL--PYPSRAFDMAHC 288 (636)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~--~v~vv~i~p~Dis~a~l~~A~er----g--~~~~~~~~d~~~L--pf~~~sFDlV~~ 288 (636)
..+|||||||+|.++..++++ +..++.+ |+ +.+++.|+++ + ..+.+..+|.... |++ ++||+|++
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~---D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p-~~~D~v~~ 254 (363)
T 3dp7_A 180 PKRLLDIGGNTGKWATQCVQYNKEVEVTIV---DL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFP-TGFDAVWM 254 (363)
T ss_dssp CSEEEEESCTTCHHHHHHHHHSTTCEEEEE---EC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCC-CCCSEEEE
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCEEEEE---eC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCCC-CCcCEEEE
Confidence 358999999999999999985 5666666 77 7888888765 2 2478888888775 566 78999999
Q ss_pred cccccccccCh-HHHHHHHHhcccCCcEEEEEeC
Q 006662 289 SRCLIPWGQYD-GLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 289 s~~L~h~~~d~-~~~L~el~RvLKPGG~Liis~p 321 (636)
..++++|.++. ..+|+++.++|||||++++..+
T Consensus 255 ~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (363)
T 3dp7_A 255 SQFLDCFSEEEVISILTRVAQSIGKDSKVYIMET 288 (363)
T ss_dssp ESCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred echhhhCCHHHHHHHHHHHHHhcCCCcEEEEEee
Confidence 99998886433 5889999999999999999864
No 134
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.05 E-value=7.8e-10 Score=107.85 Aligned_cols=106 Identities=18% Similarity=0.161 Sum_probs=81.5
Q ss_pred HHHHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhcC---CEEEEcCcCCchHHHHHHHHHc----C-CCeEEEEeccc
Q 006662 203 AYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRN---ILAVSFAPRDTHEAQVQFALER----G-VPALIGVMASI 274 (636)
Q Consensus 203 ~~id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~~---v~vv~i~p~Dis~a~l~~A~er----g-~~~~~~~~d~~ 274 (636)
.....+.+.+...++. +|||||||+|.++..+++.. ..++.+ |+++.+++.++++ + .++.+...+..
T Consensus 64 ~~~~~~~~~~~~~~~~--~vLdiG~G~G~~~~~l~~~~~~~~~v~~v---D~~~~~~~~a~~~~~~~~~~~v~~~~~d~~ 138 (215)
T 2yxe_A 64 HMVGMMCELLDLKPGM--KVLEIGTGCGYHAAVTAEIVGEDGLVVSI---ERIPELAEKAERTLRKLGYDNVIVIVGDGT 138 (215)
T ss_dssp HHHHHHHHHTTCCTTC--EEEEECCTTSHHHHHHHHHHCTTSEEEEE---ESCHHHHHHHHHHHHHHTCTTEEEEESCGG
T ss_pred HHHHHHHHhhCCCCCC--EEEEECCCccHHHHHHHHHhCCCCEEEEE---eCCHHHHHHHHHHHHHcCCCCeEEEECCcc
Confidence 3445566666555555 99999999999999999874 666677 8898998888754 3 24777777764
Q ss_pred cCCCC-CCCeeEEEecccccccccChHHHHHHHHhcccCCcEEEEEeC
Q 006662 275 RLPYP-SRAFDMAHCSRCLIPWGQYDGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 275 ~Lpf~-~~sFDlV~~s~~L~h~~~d~~~~L~el~RvLKPGG~Liis~p 321 (636)
. +++ .++||+|++..+++++. .++.++|||||.+++..+
T Consensus 139 ~-~~~~~~~fD~v~~~~~~~~~~-------~~~~~~L~pgG~lv~~~~ 178 (215)
T 2yxe_A 139 L-GYEPLAPYDRIYTTAAGPKIP-------EPLIRQLKDGGKLLMPVG 178 (215)
T ss_dssp G-CCGGGCCEEEEEESSBBSSCC-------HHHHHTEEEEEEEEEEES
T ss_pred c-CCCCCCCeeEEEECCchHHHH-------HHHHHHcCCCcEEEEEEC
Confidence 3 333 67899999999986654 489999999999999976
No 135
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.04 E-value=9.3e-10 Score=113.10 Aligned_cols=151 Identities=10% Similarity=0.059 Sum_probs=101.6
Q ss_pred CCceecCCCCCCCcccHHHHHHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhcCC-EEEEcCcCCchHHHHHHHHHc-
Q 006662 185 GDRFSFPGGGTMFPRGADAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNI-LAVSFAPRDTHEAQVQFALER- 262 (636)
Q Consensus 185 g~~~~F~ggg~~f~~g~~~~id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~~v-~vv~i~p~Dis~a~l~~A~er- 262 (636)
|-.|.+.-...+|..........+.+++ .++. +|||+|||+|.++..+++.+. .++++ |+++.+++.|+++
T Consensus 96 g~~f~~d~~~~~f~~~~~~~~~~l~~~~--~~~~--~VLDlgcG~G~~~~~la~~~~~~V~~v---D~s~~~~~~a~~n~ 168 (278)
T 2frn_A 96 GIKYKLDVAKIMFSPANVKERVRMAKVA--KPDE--LVVDMFAGIGHLSLPIAVYGKAKVIAI---EKDPYTFKFLVENI 168 (278)
T ss_dssp TEEEEEETTTSCCCGGGHHHHHHHHHHC--CTTC--EEEETTCTTTTTHHHHHHHTCCEEEEE---CCCHHHHHHHHHHH
T ss_pred CEEEEEEccceeEcCCcHHHHHHHHHhC--CCCC--EEEEecccCCHHHHHHHHhCCCEEEEE---ECCHHHHHHHHHHH
Confidence 3344442223444444344444555553 3344 899999999999999999865 46677 9999999888754
Q ss_pred ---CCC--eEEEEeccccCCCCCCCeeEEEecccccccccChHHHHHHHHhcccCCcEEEEEeCCCCccccccCCCCchh
Q 006662 263 ---GVP--ALIGVMASIRLPYPSRAFDMAHCSRCLIPWGQYDGLYLIEVDRVLRPGGYWILSGPPVNWESHWKGWNRTTE 337 (636)
Q Consensus 263 ---g~~--~~~~~~d~~~Lpf~~~sFDlV~~s~~L~h~~~d~~~~L~el~RvLKPGG~Liis~p~~~w~~~~~~W~~t~e 337 (636)
+.. +.+..+|...++. +++||+|++... .....++.++.++|||||++++....... .
T Consensus 169 ~~n~~~~~v~~~~~D~~~~~~-~~~fD~Vi~~~p-----~~~~~~l~~~~~~LkpgG~l~~~~~~~~~-----------~ 231 (278)
T 2frn_A 169 HLNKVEDRMSAYNMDNRDFPG-ENIADRILMGYV-----VRTHEFIPKALSIAKDGAIIHYHNTVPEK-----------L 231 (278)
T ss_dssp HHTTCTTTEEEECSCTTTCCC-CSCEEEEEECCC-----SSGGGGHHHHHHHEEEEEEEEEEEEEEGG-----------G
T ss_pred HHcCCCceEEEEECCHHHhcc-cCCccEEEECCc-----hhHHHHHHHHHHHCCCCeEEEEEEeeccc-----------c
Confidence 432 7788888888776 788999998543 23367899999999999999998642100 0
Q ss_pred hhHHHHHHHHHHHHHhceEeec
Q 006662 338 DLKSEQNGIETIARSLCWKKLI 359 (636)
Q Consensus 338 ~l~~~~~~ie~la~~l~Wk~v~ 359 (636)
......+.+.+.++..+|+...
T Consensus 232 ~~~~~~~~i~~~~~~~G~~~~~ 253 (278)
T 2frn_A 232 MPREPFETFKRITKEYGYDVEK 253 (278)
T ss_dssp TTTTTHHHHHHHHHHTTCEEEE
T ss_pred ccccHHHHHHHHHHHcCCeeEE
Confidence 0012234567778888886543
No 136
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.04 E-value=5.4e-10 Score=112.31 Aligned_cols=98 Identities=18% Similarity=0.177 Sum_probs=75.5
Q ss_pred cEEEEeCCCCcHHHHHHhhc--CCEEEEcCcCCchHHHHHHHHHc----------C-CCeEEEEecccc-CC--CCCCCe
Q 006662 220 RTAIDTGCGVASWGAYLMSR--NILAVSFAPRDTHEAQVQFALER----------G-VPALIGVMASIR-LP--YPSRAF 283 (636)
Q Consensus 220 r~VLDIGCGtG~~a~~La~~--~v~vv~i~p~Dis~a~l~~A~er----------g-~~~~~~~~d~~~-Lp--f~~~sF 283 (636)
.+|||||||+|.++..|++. +..++++ |+++.+++.|+++ + .++.+..+|+.. ++ +++++|
T Consensus 48 ~~vLDiGcG~G~~~~~la~~~p~~~v~Gi---Dis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~ 124 (235)
T 3ckk_A 48 VEFADIGCGYGGLLVELSPLFPDTLILGL---EIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQL 124 (235)
T ss_dssp EEEEEETCTTCHHHHHHGGGSTTSEEEEE---ESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCE
T ss_pred CeEEEEccCCcHHHHHHHHHCCCCeEEEE---ECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCe
Confidence 48999999999999999987 4566677 8899998877532 2 358888888876 66 788999
Q ss_pred eEEEecccccccccC--------hHHHHHHHHhcccCCcEEEEEeC
Q 006662 284 DMAHCSRCLIPWGQY--------DGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 284 DlV~~s~~L~h~~~d--------~~~~L~el~RvLKPGG~Liis~p 321 (636)
|.|++...- +|... ...++.++.++|||||.|++...
T Consensus 125 D~v~~~~~d-p~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td 169 (235)
T 3ckk_A 125 TKMFFLFPD-PHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITD 169 (235)
T ss_dssp EEEEEESCC------------CCCHHHHHHHHHHEEEEEEEEEEES
T ss_pred eEEEEeCCC-chhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeC
Confidence 999876543 34211 14799999999999999999854
No 137
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.03 E-value=1.1e-09 Score=111.87 Aligned_cols=103 Identities=12% Similarity=0.139 Sum_probs=79.7
Q ss_pred HHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhc---CCEEEEcCcCCchHHHHHHHHHc-----C-CCeEEEEeccccCC
Q 006662 207 DIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR---NILAVSFAPRDTHEAQVQFALER-----G-VPALIGVMASIRLP 277 (636)
Q Consensus 207 ~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~---~v~vv~i~p~Dis~a~l~~A~er-----g-~~~~~~~~d~~~Lp 277 (636)
.+.+.+...++. +|||+|||+|.++..+++. +..++++ |+++.+++.|+++ + .++.+...|... +
T Consensus 101 ~~~~~~~~~~~~--~VLD~G~G~G~~~~~la~~~~~~~~v~~v---D~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~-~ 174 (275)
T 1yb2_A 101 YIIMRCGLRPGM--DILEVGVGSGNMSSYILYALNGKGTLTVV---ERDEDNLKKAMDNLSEFYDIGNVRTSRSDIAD-F 174 (275)
T ss_dssp -----CCCCTTC--EEEEECCTTSHHHHHHHHHHTTSSEEEEE---CSCHHHHHHHHHHHHTTSCCTTEEEECSCTTT-C
T ss_pred HHHHHcCCCCcC--EEEEecCCCCHHHHHHHHHcCCCCEEEEE---ECCHHHHHHHHHHHHhcCCCCcEEEEECchhc-c
Confidence 445555555555 9999999999999999987 6677777 8899999888755 3 357888888766 6
Q ss_pred CCCCCeeEEEecccccccccChHHHHHHHHhcccCCcEEEEEeC
Q 006662 278 YPSRAFDMAHCSRCLIPWGQYDGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 278 f~~~sFDlV~~s~~L~h~~~d~~~~L~el~RvLKPGG~Liis~p 321 (636)
+++++||+|++. . +++..++.++.++|||||++++..+
T Consensus 175 ~~~~~fD~Vi~~-----~-~~~~~~l~~~~~~LkpgG~l~i~~~ 212 (275)
T 1yb2_A 175 ISDQMYDAVIAD-----I-PDPWNHVQKIASMMKPGSVATFYLP 212 (275)
T ss_dssp CCSCCEEEEEEC-----C-SCGGGSHHHHHHTEEEEEEEEEEES
T ss_pred CcCCCccEEEEc-----C-cCHHHHHHHHHHHcCCCCEEEEEeC
Confidence 677899999982 2 3667899999999999999999976
No 138
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.03 E-value=1.3e-10 Score=112.12 Aligned_cols=115 Identities=14% Similarity=0.086 Sum_probs=68.8
Q ss_pred HHHHHHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhc--CCEEEEcCcCCchHHHHHHHHHcCC----CeEEEEeccc
Q 006662 201 ADAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR--NILAVSFAPRDTHEAQVQFALERGV----PALIGVMASI 274 (636)
Q Consensus 201 ~~~~id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~--~v~vv~i~p~Dis~a~l~~A~erg~----~~~~~~~d~~ 274 (636)
.+..++.+.+.+... ....+|||+|||+|.++..+++. +..++++ |+++.+++.++++.. ++.+..+|..
T Consensus 14 ~~~~~~~~~~~l~~~-~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~v---D~~~~~~~~a~~~~~~~~~~~~~~~~d~~ 89 (215)
T 4dzr_A 14 TEVLVEEAIRFLKRM-PSGTRVIDVGTGSGCIAVSIALACPGVSVTAV---DLSMDALAVARRNAERFGAVVDWAAADGI 89 (215)
T ss_dssp HHHHHHHHHHHHTTC-CTTEEEEEEESSBCHHHHHHHHHCTTEEEEEE---ECC-------------------CCHHHHH
T ss_pred HHHHHHHHHHHhhhc-CCCCEEEEecCCHhHHHHHHHHhCCCCeEEEE---ECCHHHHHHHHHHHHHhCCceEEEEcchH
Confidence 344556666666431 23349999999999999999998 4456666 888888888875532 3555666655
Q ss_pred cCCCCC-----CCeeEEEeccccccccc------C-------------------hHHHHHHHHhcccCCcE-EEEEe
Q 006662 275 RLPYPS-----RAFDMAHCSRCLIPWGQ------Y-------------------DGLYLIEVDRVLRPGGY-WILSG 320 (636)
Q Consensus 275 ~Lpf~~-----~sFDlV~~s~~L~h~~~------d-------------------~~~~L~el~RvLKPGG~-Liis~ 320 (636)
. ++++ ++||+|+++..+++... . ...+++++.++|||||+ +++..
T Consensus 90 ~-~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 165 (215)
T 4dzr_A 90 E-WLIERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEV 165 (215)
T ss_dssp H-HHHHHHHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEEC
T ss_pred h-hhhhhhhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEE
Confidence 5 5554 89999999755422110 0 05678899999999999 55553
No 139
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.03 E-value=4.5e-10 Score=112.07 Aligned_cols=97 Identities=16% Similarity=0.134 Sum_probs=69.4
Q ss_pred cEEEEeCCCCcHHHHHHhhc--CCEEEEcCcCCch-HHHHHHH---HHc----CC-CeEEEEeccccCCCC-CCCeeEEE
Q 006662 220 RTAIDTGCGVASWGAYLMSR--NILAVSFAPRDTH-EAQVQFA---LER----GV-PALIGVMASIRLPYP-SRAFDMAH 287 (636)
Q Consensus 220 r~VLDIGCGtG~~a~~La~~--~v~vv~i~p~Dis-~a~l~~A---~er----g~-~~~~~~~d~~~Lpf~-~~sFDlV~ 287 (636)
.+|||||||+|.++..|+++ +..++++ |++ +.+++.| +++ +. ++.+..++...+|.. .+.+|.|+
T Consensus 26 ~~vLDiGCG~G~~~~~la~~~~~~~v~Gv---D~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~~~~d~v~~i~ 102 (225)
T 3p2e_A 26 RVHIDLGTGDGRNIYKLAINDQNTFYIGI---DPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFELKNIADSIS 102 (225)
T ss_dssp EEEEEETCTTSHHHHHHHHTCTTEEEEEE---CSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCGGGTTCEEEEE
T ss_pred CEEEEEeccCcHHHHHHHHhCCCCEEEEE---eCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhhhccCeEEEEE
Confidence 48999999999999999954 5566666 888 6666555 432 33 588888898888632 25677776
Q ss_pred ecccc----cccccChHHHHHHHHhcccCCcEEEEE
Q 006662 288 CSRCL----IPWGQYDGLYLIEVDRVLRPGGYWILS 319 (636)
Q Consensus 288 ~s~~L----~h~~~d~~~~L~el~RvLKPGG~Liis 319 (636)
++... .+...+...++.++.|+|||||+|++.
T Consensus 103 ~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~ 138 (225)
T 3p2e_A 103 ILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFV 138 (225)
T ss_dssp EESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEE
T ss_pred EeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEE
Confidence 65432 112223357899999999999999994
No 140
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.02 E-value=2.4e-09 Score=107.32 Aligned_cols=105 Identities=17% Similarity=0.263 Sum_probs=83.7
Q ss_pred HHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhc---CCEEEEcCcCCchHHHHHHHHHc----CC-C-eEEEEecccc
Q 006662 205 IDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR---NILAVSFAPRDTHEAQVQFALER----GV-P-ALIGVMASIR 275 (636)
Q Consensus 205 id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~---~v~vv~i~p~Dis~a~l~~A~er----g~-~-~~~~~~d~~~ 275 (636)
...+.+.+...++. +|||+|||+|.++..+++. +..++++ |+++.+++.|+++ +. + +.+...|...
T Consensus 82 ~~~i~~~~~~~~~~--~vldiG~G~G~~~~~l~~~~~~~~~v~~~---D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 156 (255)
T 3mb5_A 82 AALIVAYAGISPGD--FIVEAGVGSGALTLFLANIVGPEGRVVSY---EIREDFAKLAWENIKWAGFDDRVTIKLKDIYE 156 (255)
T ss_dssp HHHHHHHTTCCTTC--EEEEECCTTSHHHHHHHHHHCTTSEEEEE---CSCHHHHHHHHHHHHHHTCTTTEEEECSCGGG
T ss_pred HHHHHHhhCCCCCC--EEEEecCCchHHHHHHHHHhCCCeEEEEE---ecCHHHHHHHHHHHHHcCCCCceEEEECchhh
Confidence 34566666655555 9999999999999999988 5677777 8899999888765 43 3 7888888764
Q ss_pred CCCCCCCeeEEEecccccccccChHHHHHHHHhcccCCcEEEEEeC
Q 006662 276 LPYPSRAFDMAHCSRCLIPWGQYDGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 276 Lpf~~~sFDlV~~s~~L~h~~~d~~~~L~el~RvLKPGG~Liis~p 321 (636)
++++++||+|++.. +++..++.++.++|||||++++..+
T Consensus 157 -~~~~~~~D~v~~~~------~~~~~~l~~~~~~L~~gG~l~~~~~ 195 (255)
T 3mb5_A 157 -GIEEENVDHVILDL------PQPERVVEHAAKALKPGGFFVAYTP 195 (255)
T ss_dssp -CCCCCSEEEEEECS------SCGGGGHHHHHHHEEEEEEEEEEES
T ss_pred -ccCCCCcCEEEECC------CCHHHHHHHHHHHcCCCCEEEEEEC
Confidence 37788999999832 3557899999999999999999876
No 141
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.02 E-value=1.5e-09 Score=116.39 Aligned_cols=112 Identities=15% Similarity=0.114 Sum_probs=83.2
Q ss_pred HHHHHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhcCC-EEEEcCcCCchHHHHHHHHH----cCC--CeEEEEeccc
Q 006662 202 DAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNI-LAVSFAPRDTHEAQVQFALE----RGV--PALIGVMASI 274 (636)
Q Consensus 202 ~~~id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~~v-~vv~i~p~Dis~a~l~~A~e----rg~--~~~~~~~d~~ 274 (636)
+.+.+.+.+.+...++. +|||||||+|.++..+++++. .++++ |++ .+++.|++ ++. .+.+..++..
T Consensus 49 ~~~~~~i~~~~~~~~~~--~VLDlGcGtG~ls~~la~~g~~~V~gv---D~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~ 122 (376)
T 3r0q_C 49 DAYFNAVFQNKHHFEGK--TVLDVGTGSGILAIWSAQAGARKVYAV---EAT-KMADHARALVKANNLDHIVEVIEGSVE 122 (376)
T ss_dssp HHHHHHHHTTTTTTTTC--EEEEESCTTTHHHHHHHHTTCSEEEEE---ESS-TTHHHHHHHHHHTTCTTTEEEEESCGG
T ss_pred HHHHHHHHhccccCCCC--EEEEeccCcCHHHHHHHhcCCCEEEEE---ccH-HHHHHHHHHHHHcCCCCeEEEEECchh
Confidence 44555555544444444 999999999999999999876 66666 666 66666543 343 3789999999
Q ss_pred cCCCCCCCeeEEEecccccccc--cChHHHHHHHHhcccCCcEEEEEe
Q 006662 275 RLPYPSRAFDMAHCSRCLIPWG--QYDGLYLIEVDRVLRPGGYWILSG 320 (636)
Q Consensus 275 ~Lpf~~~sFDlV~~s~~L~h~~--~d~~~~L~el~RvLKPGG~Liis~ 320 (636)
.++++ ++||+|++..+.+... .....++.++.++|||||+++++.
T Consensus 123 ~~~~~-~~~D~Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~~ 169 (376)
T 3r0q_C 123 DISLP-EKVDVIISEWMGYFLLRESMFDSVISARDRWLKPTGVMYPSH 169 (376)
T ss_dssp GCCCS-SCEEEEEECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEESSE
T ss_pred hcCcC-CcceEEEEcChhhcccchHHHHHHHHHHHhhCCCCeEEEEec
Confidence 88877 8899999966442222 345789999999999999998864
No 142
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.02 E-value=2.8e-10 Score=122.80 Aligned_cols=129 Identities=9% Similarity=0.066 Sum_probs=84.4
Q ss_pred CcEEEEeCCC------CcHHHHHHhhc---CCEEEEcCcCCchHHHHHHHHHcCCCeEEEEeccccCCCC------CCCe
Q 006662 219 IRTAIDTGCG------VASWGAYLMSR---NILAVSFAPRDTHEAQVQFALERGVPALIGVMASIRLPYP------SRAF 283 (636)
Q Consensus 219 ~r~VLDIGCG------tG~~a~~La~~---~v~vv~i~p~Dis~a~l~~A~erg~~~~~~~~d~~~Lpf~------~~sF 283 (636)
..+||||||| +|..+..++++ +..++++ |+++.+. ....++.+.++|...+|+. +++|
T Consensus 217 ~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GV---DiSp~m~----~~~~rI~fv~GDa~dlpf~~~l~~~d~sF 289 (419)
T 3sso_A 217 QVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGL---DIMDKSH----VDELRIRTIQGDQNDAEFLDRIARRYGPF 289 (419)
T ss_dssp CCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEE---ESSCCGG----GCBTTEEEEECCTTCHHHHHHHHHHHCCE
T ss_pred CCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEE---ECCHHHh----hcCCCcEEEEecccccchhhhhhcccCCc
Confidence 3589999999 77666666654 4455555 5555542 2345789999999988877 7899
Q ss_pred eEEEecccccccccChHHHHHHHHhcccCCcEEEEEeCC-CCccccccCCCCchhhhHHHHHHHHHHHHHhceEe
Q 006662 284 DMAHCSRCLIPWGQYDGLYLIEVDRVLRPGGYWILSGPP-VNWESHWKGWNRTTEDLKSEQNGIETIARSLCWKK 357 (636)
Q Consensus 284 DlV~~s~~L~h~~~d~~~~L~el~RvLKPGG~Liis~p~-~~w~~~~~~W~~t~e~l~~~~~~ie~la~~l~Wk~ 357 (636)
|+|+|.. . |+..+...+|+++.|+|||||+|++.... ..|... .+-...........+.++++...+.|+.
T Consensus 290 DlVisdg-s-H~~~d~~~aL~el~rvLKPGGvlVi~Dl~tsy~p~f-~G~~~~~~~~~tii~~lk~l~D~l~~~~ 361 (419)
T 3sso_A 290 DIVIDDG-S-HINAHVRTSFAALFPHVRPGGLYVIEDMWTAYWPGF-GGQADPQECSGTSLGLLKSLIDAIQHQE 361 (419)
T ss_dssp EEEEECS-C-CCHHHHHHHHHHHGGGEEEEEEEEEECGGGGGCTBT-TCCSSTTCCTTSHHHHHHHHHHHHTGGG
T ss_pred cEEEECC-c-ccchhHHHHHHHHHHhcCCCeEEEEEecccccCccc-CCCccCCcchhHHHHHHHHHHHHhcccc
Confidence 9999964 3 44456789999999999999999998542 222221 1111101122334455666666665543
No 143
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.01 E-value=8.8e-10 Score=116.92 Aligned_cols=112 Identities=12% Similarity=0.068 Sum_probs=84.0
Q ss_pred HHHHHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhcCC-EEEEcCcCCchHHHHHHHHH----cCC--CeEEEEeccc
Q 006662 202 DAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNI-LAVSFAPRDTHEAQVQFALE----RGV--PALIGVMASI 274 (636)
Q Consensus 202 ~~~id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~~v-~vv~i~p~Dis~a~l~~A~e----rg~--~~~~~~~d~~ 274 (636)
..+.+.+.+.+...++. +|||||||+|.++..+++.+. .++++ |+++ +++.|++ .+. .+.+...+..
T Consensus 36 ~~y~~~i~~~l~~~~~~--~VLDiGcGtG~ls~~la~~g~~~V~~v---D~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~ 109 (348)
T 2y1w_A 36 GTYQRAILQNHTDFKDK--IVLDVGCGSGILSFFAAQAGARKIYAV---EAST-MAQHAEVLVKSNNLTDRIVVIPGKVE 109 (348)
T ss_dssp HHHHHHHHHTGGGTTTC--EEEEETCTTSHHHHHHHHTTCSEEEEE---ECST-HHHHHHHHHHHTTCTTTEEEEESCTT
T ss_pred HHHHHHHHhccccCCcC--EEEEcCCCccHHHHHHHhCCCCEEEEE---CCHH-HHHHHHHHHHHcCCCCcEEEEEcchh
Confidence 44566677666555555 999999999999999998854 56666 5553 5555543 343 5888888888
Q ss_pred cCCCCCCCeeEEEecccccccccC-hHHHHHHHHhcccCCcEEEEEe
Q 006662 275 RLPYPSRAFDMAHCSRCLIPWGQY-DGLYLIEVDRVLRPGGYWILSG 320 (636)
Q Consensus 275 ~Lpf~~~sFDlV~~s~~L~h~~~d-~~~~L~el~RvLKPGG~Liis~ 320 (636)
.++++ ++||+|++..+++|+... ....+.++.++|||||.+++..
T Consensus 110 ~~~~~-~~~D~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 155 (348)
T 2y1w_A 110 EVSLP-EQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPTI 155 (348)
T ss_dssp TCCCS-SCEEEEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESCE
T ss_pred hCCCC-CceeEEEEeCchhcCChHHHHHHHHHHHhhcCCCeEEEEec
Confidence 87766 579999999887777533 3678889999999999998753
No 144
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.01 E-value=1e-09 Score=110.27 Aligned_cols=145 Identities=13% Similarity=0.132 Sum_probs=86.3
Q ss_pred HHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhcCC-EEEEcCcCCchHHHHHHHHHcCCCeEEEEe-ccccC---CCCC
Q 006662 206 DDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNI-LAVSFAPRDTHEAQVQFALERGVPALIGVM-ASIRL---PYPS 280 (636)
Q Consensus 206 d~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~~v-~vv~i~p~Dis~a~l~~A~erg~~~~~~~~-d~~~L---pf~~ 280 (636)
+.+.+.+... ....+|||||||+|.++..|++++. .++++ |+++.|++.|+++...+..... +...+ .++.
T Consensus 26 ~~~L~~~~~~-~~g~~VLDiGcGtG~~t~~la~~g~~~V~gv---Dis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (232)
T 3opn_A 26 EKALKEFHLE-INGKTCLDIGSSTGGFTDVMLQNGAKLVYAL---DVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQ 101 (232)
T ss_dssp HHHHHHTTCC-CTTCEEEEETCTTSHHHHHHHHTTCSEEEEE---CSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCS
T ss_pred HHHHHHcCCC-CCCCEEEEEccCCCHHHHHHHhcCCCEEEEE---cCCHHHHHHHHHhCccccccccceEEEeCHhHcCc
Confidence 3444444332 2234899999999999999999874 66677 8888888887776544332211 11111 1122
Q ss_pred CCeeEEEecccccccccChHHHHHHHHhcccCCcEEEEEeCCCCccccc-----cCCCCchhhhHHHHHHHHHHHHHhce
Q 006662 281 RAFDMAHCSRCLIPWGQYDGLYLIEVDRVLRPGGYWILSGPPVNWESHW-----KGWNRTTEDLKSEQNGIETIARSLCW 355 (636)
Q Consensus 281 ~sFDlV~~s~~L~h~~~d~~~~L~el~RvLKPGG~Liis~p~~~w~~~~-----~~W~~t~e~l~~~~~~ie~la~~l~W 355 (636)
..||.+.+..++.++ ..++.++.|+|||||+|++...+ .+...+ .+.-+.........+++.++++..+|
T Consensus 102 ~~~d~~~~D~v~~~l----~~~l~~i~rvLkpgG~lv~~~~p-~~e~~~~~~~~~G~~~d~~~~~~~~~~l~~~l~~aGf 176 (232)
T 3opn_A 102 GRPSFTSIDVSFISL----DLILPPLYEILEKNGEVAALIKP-QFEAGREQVGKNGIIRDPKVHQMTIEKVLKTATQLGF 176 (232)
T ss_dssp CCCSEEEECCSSSCG----GGTHHHHHHHSCTTCEEEEEECH-HHHSCHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHTE
T ss_pred CCCCEEEEEEEhhhH----HHHHHHHHHhccCCCEEEEEECc-ccccCHHHhCcCCeecCcchhHHHHHHHHHHHHHCCC
Confidence 224555444444333 57999999999999999997421 111110 11111222333456678888999999
Q ss_pred Eeec
Q 006662 356 KKLI 359 (636)
Q Consensus 356 k~v~ 359 (636)
+.+.
T Consensus 177 ~v~~ 180 (232)
T 3opn_A 177 SVKG 180 (232)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7643
No 145
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.01 E-value=8.8e-10 Score=115.21 Aligned_cols=107 Identities=14% Similarity=0.080 Sum_probs=84.0
Q ss_pred HHHHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhcCC---EEEEcCcCCchHHHHHHHHHc----CC-CeEEEEeccc
Q 006662 203 AYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNI---LAVSFAPRDTHEAQVQFALER----GV-PALIGVMASI 274 (636)
Q Consensus 203 ~~id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~~v---~vv~i~p~Dis~a~l~~A~er----g~-~~~~~~~d~~ 274 (636)
...+.+.+.+...++. +|||||||+|.++..+++.+. .++++ |+++.+++.|+++ +. ++.+...|..
T Consensus 62 ~~~~~l~~~l~~~~~~--~VLDiGcG~G~~~~~la~~~~~~~~v~gv---D~s~~~~~~a~~~~~~~g~~~v~~~~~d~~ 136 (317)
T 1dl5_A 62 SLMALFMEWVGLDKGM--RVLEIGGGTGYNAAVMSRVVGEKGLVVSV---EYSRKICEIAKRNVERLGIENVIFVCGDGY 136 (317)
T ss_dssp HHHHHHHHHTTCCTTC--EEEEECCTTSHHHHHHHHHHCTTCEEEEE---ESCHHHHHHHHHHHHHTTCCSEEEEESCGG
T ss_pred HHHHHHHHhcCCCCcC--EEEEecCCchHHHHHHHHhcCCCCEEEEE---ECCHHHHHHHHHHHHHcCCCCeEEEECChh
Confidence 4556677777666655 999999999999999998733 36666 8888998888755 33 4788888887
Q ss_pred cCCCCCCCeeEEEecccccccccChHHHHHHHHhcccCCcEEEEEeC
Q 006662 275 RLPYPSRAFDMAHCSRCLIPWGQYDGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 275 ~Lpf~~~sFDlV~~s~~L~h~~~d~~~~L~el~RvLKPGG~Liis~p 321 (636)
..+.++++||+|++..++++.. .++.++|||||.+++...
T Consensus 137 ~~~~~~~~fD~Iv~~~~~~~~~-------~~~~~~LkpgG~lvi~~~ 176 (317)
T 1dl5_A 137 YGVPEFSPYDVIFVTVGVDEVP-------ETWFTQLKEGGRVIVPIN 176 (317)
T ss_dssp GCCGGGCCEEEEEECSBBSCCC-------HHHHHHEEEEEEEEEEBC
T ss_pred hccccCCCeEEEEEcCCHHHHH-------HHHHHhcCCCcEEEEEEC
Confidence 7655567899999999986654 578899999999999864
No 146
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.00 E-value=1.1e-09 Score=116.11 Aligned_cols=107 Identities=21% Similarity=0.267 Sum_probs=82.1
Q ss_pred HHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhc--CCEEEEcCcCCchHHHHHHHHHc----CC--CeEEEEeccccCCC
Q 006662 207 DIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR--NILAVSFAPRDTHEAQVQFALER----GV--PALIGVMASIRLPY 278 (636)
Q Consensus 207 ~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~--~v~vv~i~p~Dis~a~l~~A~er----g~--~~~~~~~d~~~Lpf 278 (636)
.+.+.++..++ .+|||||||+|.++..++++ +..++.+ |+ +.+++.|+++ +. .+.+...|... ++
T Consensus 173 ~~~~~~~~~~~--~~vlDvG~G~G~~~~~l~~~~~~~~~~~~---D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~ 245 (374)
T 1qzz_A 173 APADAYDWSAV--RHVLDVGGGNGGMLAAIALRAPHLRGTLV---EL-AGPAERARRRFADAGLADRVTVAEGDFFK-PL 245 (374)
T ss_dssp HHHHTSCCTTC--CEEEEETCTTSHHHHHHHHHCTTCEEEEE---EC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS-CC
T ss_pred HHHHhCCCCCC--CEEEEECCCcCHHHHHHHHHCCCCEEEEE---eC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-cC
Confidence 44444444433 49999999999999999987 4666676 88 7888887653 33 47888888754 44
Q ss_pred CCCCeeEEEecccccccccCh-HHHHHHHHhcccCCcEEEEEeC
Q 006662 279 PSRAFDMAHCSRCLIPWGQYD-GLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 279 ~~~sFDlV~~s~~L~h~~~d~-~~~L~el~RvLKPGG~Liis~p 321 (636)
+. .||+|++..++++|.+.. ..+++++.++|||||++++..+
T Consensus 246 ~~-~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 246 PV-TADVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp SC-CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CC-CCCEEEEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 44 399999999998776332 4899999999999999999865
No 147
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.00 E-value=1.1e-09 Score=114.48 Aligned_cols=108 Identities=16% Similarity=0.190 Sum_probs=79.7
Q ss_pred HHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhc--CCEEEEcCcCCchHHHHHHHHHc------CCCeEEEEeccccC
Q 006662 205 IDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR--NILAVSFAPRDTHEAQVQFALER------GVPALIGVMASIRL 276 (636)
Q Consensus 205 id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~--~v~vv~i~p~Dis~a~l~~A~er------g~~~~~~~~d~~~L 276 (636)
...+.+.++... .+|||||||+|.++..++++ +..++.+ |+ +.+++.|+++ ...+.+...|...
T Consensus 157 ~~~~~~~~~~~~---~~vlDvG~G~G~~~~~l~~~~p~~~~~~~---D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~- 228 (334)
T 2ip2_A 157 FHEIPRLLDFRG---RSFVDVGGGSGELTKAILQAEPSARGVML---DR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ- 228 (334)
T ss_dssp HHHHHHHSCCTT---CEEEEETCTTCHHHHHHHHHCTTCEEEEE---EC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT-
T ss_pred HHHHHHhCCCCC---CEEEEeCCCchHHHHHHHHHCCCCEEEEe---Cc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC-
Confidence 344555544433 59999999999999999987 4444444 55 4555555443 2357888888766
Q ss_pred CCCCCCeeEEEecccccccccCh-HHHHHHHHhcccCCcEEEEEeC
Q 006662 277 PYPSRAFDMAHCSRCLIPWGQYD-GLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 277 pf~~~sFDlV~~s~~L~h~~~d~-~~~L~el~RvLKPGG~Liis~p 321 (636)
+++ ++||+|++..++++|.+.. ..+++++.++|||||++++..+
T Consensus 229 ~~~-~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 273 (334)
T 2ip2_A 229 EVP-SNGDIYLLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIER 273 (334)
T ss_dssp CCC-SSCSEEEEESCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEEC
T ss_pred CCC-CCCCEEEEchhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 555 6799999999998886332 4899999999999999999865
No 148
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.00 E-value=1.6e-09 Score=114.79 Aligned_cols=109 Identities=17% Similarity=0.218 Sum_probs=83.2
Q ss_pred HHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhc--CCEEEEcCcCCchHHHHHHHHHc----CC--CeEEEEeccccC
Q 006662 205 IDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR--NILAVSFAPRDTHEAQVQFALER----GV--PALIGVMASIRL 276 (636)
Q Consensus 205 id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~--~v~vv~i~p~Dis~a~l~~A~er----g~--~~~~~~~d~~~L 276 (636)
.+.+.+.++..++ .+|||||||+|.++..++++ +..++.+ |+ +.+++.|+++ +. .+.+...|....
T Consensus 179 ~~~l~~~~~~~~~--~~vLDvG~G~G~~~~~l~~~~p~~~~~~~---D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 252 (359)
T 1x19_A 179 IQLLLEEAKLDGV--KKMIDVGGGIGDISAAMLKHFPELDSTIL---NL-PGAIDLVNENAAEKGVADRMRGIAVDIYKE 252 (359)
T ss_dssp HHHHHHHCCCTTC--CEEEEESCTTCHHHHHHHHHCTTCEEEEE---EC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTS
T ss_pred HHHHHHhcCCCCC--CEEEEECCcccHHHHHHHHHCCCCeEEEE---ec-HHHHHHHHHHHHhcCCCCCEEEEeCccccC
Confidence 3455555554443 49999999999999999987 4556666 66 6666666543 33 388898998887
Q ss_pred CCCCCCeeEEEecccccccccC-hHHHHHHHHhcccCCcEEEEEeC
Q 006662 277 PYPSRAFDMAHCSRCLIPWGQY-DGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 277 pf~~~sFDlV~~s~~L~h~~~d-~~~~L~el~RvLKPGG~Liis~p 321 (636)
++++. |+|++..++++|.++ ...+++++.++|||||++++...
T Consensus 253 ~~~~~--D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~ 296 (359)
T 1x19_A 253 SYPEA--DAVLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILDM 296 (359)
T ss_dssp CCCCC--SEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEE
T ss_pred CCCCC--CEEEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEec
Confidence 77654 999999999888643 47899999999999999988763
No 149
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.00 E-value=1.4e-09 Score=105.26 Aligned_cols=109 Identities=14% Similarity=0.009 Sum_probs=80.5
Q ss_pred HHHHHHHhhccCC-CCCcEEEEeCCCCcHHHHHHhhc--CCEEEEcCcCCchHHHHHHHHHc----CC-CeEEEEecccc
Q 006662 204 YIDDIGKLINLKD-GSIRTAIDTGCGVASWGAYLMSR--NILAVSFAPRDTHEAQVQFALER----GV-PALIGVMASIR 275 (636)
Q Consensus 204 ~id~L~~lL~l~~-g~~r~VLDIGCGtG~~a~~La~~--~v~vv~i~p~Dis~a~l~~A~er----g~-~~~~~~~d~~~ 275 (636)
+.+.+.+.+...+ ....+|||+|||+|.++..++.. +..++++ |+++.+++.++++ +. ++.+...+...
T Consensus 50 ~~~~~~~~l~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~v---D~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~ 126 (207)
T 1jsx_A 50 LVRHILDSIVVAPYLQGERFIDVGTGPGLPGIPLSIVRPEAHFTLL---DSLGKRVRFLRQVQHELKLENIEPVQSRVEE 126 (207)
T ss_dssp HHHHHHHHHHHGGGCCSSEEEEETCTTTTTHHHHHHHCTTSEEEEE---ESCHHHHHHHHHHHHHTTCSSEEEEECCTTT
T ss_pred HHHHHHhhhhhhhhcCCCeEEEECCCCCHHHHHHHHHCCCCEEEEE---eCCHHHHHHHHHHHHHcCCCCeEEEecchhh
Confidence 4444444443221 01238999999999999999986 5566666 8888888888654 33 37888888777
Q ss_pred CCCCCCCeeEEEecccccccccChHHHHHHHHhcccCCcEEEEEeC
Q 006662 276 LPYPSRAFDMAHCSRCLIPWGQYDGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 276 Lpf~~~sFDlV~~s~~L~h~~~d~~~~L~el~RvLKPGG~Liis~p 321 (636)
++ +.++||+|++.. + .+...++.++.++|+|||++++...
T Consensus 127 ~~-~~~~~D~i~~~~-~----~~~~~~l~~~~~~L~~gG~l~~~~~ 166 (207)
T 1jsx_A 127 FP-SEPPFDGVISRA-F----ASLNDMVSWCHHLPGEQGRFYALKG 166 (207)
T ss_dssp SC-CCSCEEEEECSC-S----SSHHHHHHHHTTSEEEEEEEEEEES
T ss_pred CC-ccCCcCEEEEec-c----CCHHHHHHHHHHhcCCCcEEEEEeC
Confidence 65 457899999854 2 3557999999999999999999843
No 150
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.00 E-value=3e-09 Score=109.37 Aligned_cols=116 Identities=16% Similarity=0.048 Sum_probs=81.8
Q ss_pred cHHHHHHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhcCC-EEEEcCcCCc-hHHHHHHHHHcC--------------
Q 006662 200 GADAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNI-LAVSFAPRDT-HEAQVQFALERG-------------- 263 (636)
Q Consensus 200 g~~~~id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~~v-~vv~i~p~Di-s~a~l~~A~erg-------------- 263 (636)
+.....+.+.+......+. +|||||||+|.++..+++.+. .++++ |+ ++.+++.++++.
T Consensus 63 ~~~~l~~~l~~~~~~~~~~--~vLDlG~G~G~~~~~~a~~~~~~v~~~---D~s~~~~~~~a~~n~~~N~~~~~~~~~~~ 137 (281)
T 3bzb_A 63 GARALADTLCWQPELIAGK--TVCELGAGAGLVSIVAFLAGADQVVAT---DYPDPEILNSLESNIREHTANSCSSETVK 137 (281)
T ss_dssp HHHHHHHHHHHCGGGTTTC--EEEETTCTTSHHHHHHHHTTCSEEEEE---ECSCHHHHHHHHHHHHTTCC---------
T ss_pred HHHHHHHHHHhcchhcCCC--eEEEecccccHHHHHHHHcCCCEEEEE---eCCCHHHHHHHHHHHHHhhhhhcccccCC
Confidence 3444555555544334444 899999999999999998875 67777 88 788888876542
Q ss_pred -CCeEEEEeccccCC--C----CCCCeeEEEecccccccccChHHHHHHHHhccc---C--CcEEEEEeC
Q 006662 264 -VPALIGVMASIRLP--Y----PSRAFDMAHCSRCLIPWGQYDGLYLIEVDRVLR---P--GGYWILSGP 321 (636)
Q Consensus 264 -~~~~~~~~d~~~Lp--f----~~~sFDlV~~s~~L~h~~~d~~~~L~el~RvLK---P--GG~Liis~p 321 (636)
..+.+...+..... + ++++||+|+++.++++ ..+...++..+.++|+ | ||.+++...
T Consensus 138 ~~~v~~~~~~~~~~~~~~~~~~~~~~fD~Ii~~dvl~~-~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~ 206 (281)
T 3bzb_A 138 RASPKVVPYRWGDSPDSLQRCTGLQRFQVVLLADLLSF-HQAHDALLRSVKMLLALPANDPTAVALVTFT 206 (281)
T ss_dssp -CCCEEEECCTTSCTHHHHHHHSCSSBSEEEEESCCSC-GGGHHHHHHHHHHHBCCTTTCTTCEEEEEEC
T ss_pred CCCeEEEEecCCCccHHHHhhccCCCCCEEEEeCcccC-hHHHHHHHHHHHHHhcccCCCCCCEEEEEEE
Confidence 12444433322211 1 3578999999998855 4567899999999999 9 998877643
No 151
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=98.99 E-value=4.2e-10 Score=110.03 Aligned_cols=110 Identities=12% Similarity=0.214 Sum_probs=82.7
Q ss_pred HHHHHHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhc--CCEEEEcCcCCchHHHHHHHHHc----CCCeEEEEeccc
Q 006662 201 ADAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR--NILAVSFAPRDTHEAQVQFALER----GVPALIGVMASI 274 (636)
Q Consensus 201 ~~~~id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~--~v~vv~i~p~Dis~a~l~~A~er----g~~~~~~~~d~~ 274 (636)
.+.+.+.+.++++ + ..+|||+|||+|.++..++.. ++.++.+ |+++.++++++++ |+...+...+..
T Consensus 36 ld~fY~~~~~~l~--~--~~~VLDlGCG~GplAl~l~~~~p~a~~~A~---Di~~~~leiar~~~~~~g~~~~v~~~d~~ 108 (200)
T 3fzg_A 36 LNDFYTYVFGNIK--H--VSSILDFGCGFNPLALYQWNENEKIIYHAY---DIDRAEIAFLSSIIGKLKTTIKYRFLNKE 108 (200)
T ss_dssp HHHHHHHHHHHSC--C--CSEEEEETCTTHHHHHHHHCSSCCCEEEEE---CSCHHHHHHHHHHHHHSCCSSEEEEECCH
T ss_pred HHHHHHHHHhhcC--C--CCeEEEecCCCCHHHHHHHhcCCCCEEEEE---eCCHHHHHHHHHHHHhcCCCccEEEeccc
Confidence 4556666666652 2 348999999999999999877 5566666 9999999998754 555344445554
Q ss_pred cCCCCCCCeeEEEecccccccccChHHHHHHHHhcccCCcEEEEE
Q 006662 275 RLPYPSRAFDMAHCSRCLIPWGQYDGLYLIEVDRVLRPGGYWILS 319 (636)
Q Consensus 275 ~Lpf~~~sFDlV~~s~~L~h~~~d~~~~L~el~RvLKPGG~Liis 319 (636)
.. .+.++||+|+...++++. ++.+..+.++.+.|||||+||-.
T Consensus 109 ~~-~~~~~~DvVLa~k~LHlL-~~~~~al~~v~~~L~pggvfISf 151 (200)
T 3fzg_A 109 SD-VYKGTYDVVFLLKMLPVL-KQQDVNILDFLQLFHTQNFVISF 151 (200)
T ss_dssp HH-HTTSEEEEEEEETCHHHH-HHTTCCHHHHHHTCEEEEEEEEE
T ss_pred cc-CCCCCcChhhHhhHHHhh-hhhHHHHHHHHHHhCCCCEEEEe
Confidence 43 466889999999999666 56667777999999999988665
No 152
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=98.99 E-value=1.9e-09 Score=113.99 Aligned_cols=106 Identities=18% Similarity=0.167 Sum_probs=76.6
Q ss_pred HHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhc--CCEEEEcCcCCchHHHHHHHH--Hc--CCCeEEEEeccccCCCCC
Q 006662 207 DIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR--NILAVSFAPRDTHEAQVQFAL--ER--GVPALIGVMASIRLPYPS 280 (636)
Q Consensus 207 ~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~--~v~vv~i~p~Dis~a~l~~A~--er--g~~~~~~~~d~~~Lpf~~ 280 (636)
.+.+.++..+ ..+|||||||+|.++..++++ +..++.+ |+++. +..+. +. ...+.+..+|.. .+++
T Consensus 175 ~~~~~~~~~~--~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~---D~~~~-~~~~~~~~~~~~~~v~~~~~d~~-~~~p- 246 (348)
T 3lst_A 175 ILARAGDFPA--TGTVADVGGGRGGFLLTVLREHPGLQGVLL---DRAEV-VARHRLDAPDVAGRWKVVEGDFL-REVP- 246 (348)
T ss_dssp HHHHHSCCCS--SEEEEEETCTTSHHHHHHHHHCTTEEEEEE---ECHHH-HTTCCCCCGGGTTSEEEEECCTT-TCCC-
T ss_pred HHHHhCCccC--CceEEEECCccCHHHHHHHHHCCCCEEEEe---cCHHH-hhcccccccCCCCCeEEEecCCC-CCCC-
Confidence 3444444443 349999999999999999986 4455566 66533 32111 01 124788888875 4555
Q ss_pred CCeeEEEecccccccccCh-HHHHHHHHhcccCCcEEEEEeC
Q 006662 281 RAFDMAHCSRCLIPWGQYD-GLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 281 ~sFDlV~~s~~L~h~~~d~-~~~L~el~RvLKPGG~Liis~p 321 (636)
+||+|++..++++|.+.. ..+|+++.++|||||+|++...
T Consensus 247 -~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~ 287 (348)
T 3lst_A 247 -HADVHVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVIDA 287 (348)
T ss_dssp -CCSEEEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEEC
T ss_pred -CCcEEEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 899999999998886333 6899999999999999999864
No 153
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=98.99 E-value=2.4e-09 Score=105.30 Aligned_cols=104 Identities=19% Similarity=0.161 Sum_probs=78.8
Q ss_pred HHHHhhc--cCCCCCcEEEEeCCCCcHHHHHHhhc-C--CEEEEcCcCCchHHHHHHHHHc----C------CCeEEEEe
Q 006662 207 DIGKLIN--LKDGSIRTAIDTGCGVASWGAYLMSR-N--ILAVSFAPRDTHEAQVQFALER----G------VPALIGVM 271 (636)
Q Consensus 207 ~L~~lL~--l~~g~~r~VLDIGCGtG~~a~~La~~-~--v~vv~i~p~Dis~a~l~~A~er----g------~~~~~~~~ 271 (636)
.+.+.+. ..++ .+|||||||+|.++..+++. + ..++++ |+++.+++.++++ + .++.+...
T Consensus 66 ~~l~~l~~~~~~~--~~vLDiG~G~G~~~~~la~~~~~~~~v~~v---D~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~ 140 (226)
T 1i1n_A 66 YALELLFDQLHEG--AKALDVGSGSGILTACFARMVGCTGKVIGI---DHIKELVDDSVNNVRKDDPTLLSSGRVQLVVG 140 (226)
T ss_dssp HHHHHTTTTSCTT--CEEEEETCTTSHHHHHHHHHHCTTCEEEEE---ESCHHHHHHHHHHHHHHCTHHHHTSSEEEEES
T ss_pred HHHHHHHhhCCCC--CEEEEEcCCcCHHHHHHHHHhCCCcEEEEE---eCCHHHHHHHHHHHHhhcccccCCCcEEEEEC
Confidence 4445554 3344 49999999999999999876 3 466666 8888888887643 2 25788888
Q ss_pred ccccCCCCCCCeeEEEecccccccccChHHHHHHHHhcccCCcEEEEEeCC
Q 006662 272 ASIRLPYPSRAFDMAHCSRCLIPWGQYDGLYLIEVDRVLRPGGYWILSGPP 322 (636)
Q Consensus 272 d~~~Lpf~~~sFDlV~~s~~L~h~~~d~~~~L~el~RvLKPGG~Liis~p~ 322 (636)
|....+...++||+|++...+.++. .++.++|||||+++++.++
T Consensus 141 d~~~~~~~~~~fD~i~~~~~~~~~~-------~~~~~~LkpgG~lv~~~~~ 184 (226)
T 1i1n_A 141 DGRMGYAEEAPYDAIHVGAAAPVVP-------QALIDQLKPGGRLILPVGP 184 (226)
T ss_dssp CGGGCCGGGCCEEEEEECSBBSSCC-------HHHHHTEEEEEEEEEEESC
T ss_pred CcccCcccCCCcCEEEECCchHHHH-------HHHHHhcCCCcEEEEEEec
Confidence 8776655567899999988775543 6889999999999998753
No 154
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=98.98 E-value=5.2e-11 Score=118.45 Aligned_cols=95 Identities=15% Similarity=0.199 Sum_probs=78.6
Q ss_pred cEEEEeCCCCcHHHHHHhhcCCEEEEcCcCCchHHHHHHHHHc----CC--CeEEEEeccccCCCCCCCeeEEEeccccc
Q 006662 220 RTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALER----GV--PALIGVMASIRLPYPSRAFDMAHCSRCLI 293 (636)
Q Consensus 220 r~VLDIGCGtG~~a~~La~~~v~vv~i~p~Dis~a~l~~A~er----g~--~~~~~~~d~~~Lpf~~~sFDlV~~s~~L~ 293 (636)
.+|||+|||+|.++..+++.+..++++ |+++.+++.|+++ +. ++.+..+|...++ ++++||+|+++..++
T Consensus 80 ~~vLD~gcG~G~~~~~la~~~~~v~~v---D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~D~v~~~~~~~ 155 (241)
T 3gdh_A 80 DVVVDAFCGVGGNTIQFALTGMRVIAI---DIDPVKIALARNNAEVYGIADKIEFICGDFLLLA-SFLKADVVFLSPPWG 155 (241)
T ss_dssp SEEEETTCTTSHHHHHHHHTTCEEEEE---ESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHG-GGCCCSEEEECCCCS
T ss_pred CEEEECccccCHHHHHHHHcCCEEEEE---ECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhc-ccCCCCEEEECCCcC
Confidence 389999999999999999998777777 9999999888654 43 5888888887776 567999999998885
Q ss_pred ccccChHHHHHHHHhcccCCcEEEEE
Q 006662 294 PWGQYDGLYLIEVDRVLRPGGYWILS 319 (636)
Q Consensus 294 h~~~d~~~~L~el~RvLKPGG~Liis 319 (636)
+ ..+....+.++.++|+|||++++.
T Consensus 156 ~-~~~~~~~~~~~~~~L~pgG~~i~~ 180 (241)
T 3gdh_A 156 G-PDYATAETFDIRTMMSPDGFEIFR 180 (241)
T ss_dssp S-GGGGGSSSBCTTTSCSSCHHHHHH
T ss_pred C-cchhhhHHHHHHhhcCCcceeHHH
Confidence 4 445555778899999999997775
No 155
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=98.98 E-value=1.6e-09 Score=109.24 Aligned_cols=101 Identities=10% Similarity=0.033 Sum_probs=76.2
Q ss_pred hccCCCCCcEEEEeCCCCcHHHHHHhhc-C--CEEEEcCcCCchHHHHHHHHHcC---CCeEEEEeccc---cCCCCCCC
Q 006662 212 INLKDGSIRTAIDTGCGVASWGAYLMSR-N--ILAVSFAPRDTHEAQVQFALERG---VPALIGVMASI---RLPYPSRA 282 (636)
Q Consensus 212 L~l~~g~~r~VLDIGCGtG~~a~~La~~-~--v~vv~i~p~Dis~a~l~~A~erg---~~~~~~~~d~~---~Lpf~~~s 282 (636)
+.+++|. +|||+|||+|.++..+++. + -.+.++ |+++.+++.++++. .++.....+.. ..++..++
T Consensus 73 l~ikpG~--~VldlG~G~G~~~~~la~~VG~~G~V~av---D~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~~~~~~~ 147 (233)
T 4df3_A 73 LPVKEGD--RILYLGIASGTTASHMSDIIGPRGRIYGV---EFAPRVMRDLLTVVRDRRNIFPILGDARFPEKYRHLVEG 147 (233)
T ss_dssp CCCCTTC--EEEEETCTTSHHHHHHHHHHCTTCEEEEE---ECCHHHHHHHHHHSTTCTTEEEEESCTTCGGGGTTTCCC
T ss_pred cCCCCCC--EEEEecCcCCHHHHHHHHHhCCCceEEEE---eCCHHHHHHHHHhhHhhcCeeEEEEeccCccccccccce
Confidence 4466676 9999999999999999986 2 345555 88899988876553 34566655543 34566789
Q ss_pred eeEEEecccccccccChHHHHHHHHhcccCCcEEEEEe
Q 006662 283 FDMAHCSRCLIPWGQYDGLYLIEVDRVLRPGGYWILSG 320 (636)
Q Consensus 283 FDlV~~s~~L~h~~~d~~~~L~el~RvLKPGG~Liis~ 320 (636)
+|+|++.. +.+.+...++.++.++|||||+++++.
T Consensus 148 vDvVf~d~---~~~~~~~~~l~~~~r~LKpGG~lvI~i 182 (233)
T 4df3_A 148 VDGLYADV---AQPEQAAIVVRNARFFLRDGGYMLMAI 182 (233)
T ss_dssp EEEEEECC---CCTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEEEec---cCChhHHHHHHHHHHhccCCCEEEEEE
Confidence 99998754 333456789999999999999999974
No 156
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=98.98 E-value=1e-09 Score=117.06 Aligned_cols=93 Identities=19% Similarity=0.194 Sum_probs=76.5
Q ss_pred CcEEEEeCCCCcHHHHHHhhc--CCEEEEcCcCCchHHHHHHHHHcCCCeEEEEeccccCCCCCCCeeEEEecccccccc
Q 006662 219 IRTAIDTGCGVASWGAYLMSR--NILAVSFAPRDTHEAQVQFALERGVPALIGVMASIRLPYPSRAFDMAHCSRCLIPWG 296 (636)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~--~v~vv~i~p~Dis~a~l~~A~erg~~~~~~~~d~~~Lpf~~~sFDlV~~s~~L~h~~ 296 (636)
..+|||||||+|.++..++++ ++.++.+ |+ +.+++.+++. ..+.+..+|... +++. ||+|++..++++|.
T Consensus 210 ~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~---D~-~~~~~~a~~~-~~v~~~~~d~~~-~~~~--~D~v~~~~~lh~~~ 281 (372)
T 1fp1_D 210 ISTLVDVGGGSGRNLELIISKYPLIKGINF---DL-PQVIENAPPL-SGIEHVGGDMFA-SVPQ--GDAMILKAVCHNWS 281 (372)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTCEEEEE---EC-HHHHTTCCCC-TTEEEEECCTTT-CCCC--EEEEEEESSGGGSC
T ss_pred CCEEEEeCCCCcHHHHHHHHHCCCCeEEEe---Ch-HHHHHhhhhc-CCCEEEeCCccc-CCCC--CCEEEEecccccCC
Confidence 359999999999999999987 4566666 77 7777776543 458888888766 6664 99999999997775
Q ss_pred cChH--HHHHHHHhcccCCcEEEEEe
Q 006662 297 QYDG--LYLIEVDRVLRPGGYWILSG 320 (636)
Q Consensus 297 ~d~~--~~L~el~RvLKPGG~Liis~ 320 (636)
++. .+|+++.++|||||++++..
T Consensus 282 -d~~~~~~l~~~~~~L~pgG~l~i~e 306 (372)
T 1fp1_D 282 -DEKCIEFLSNCHKALSPNGKVIIVE 306 (372)
T ss_dssp -HHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred -HHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 554 89999999999999999985
No 157
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=98.98 E-value=1.9e-09 Score=109.56 Aligned_cols=109 Identities=12% Similarity=0.070 Sum_probs=81.0
Q ss_pred HHHhhccCCCCCcEEEEeCCCCcHHHHHHhhcC--CEEEEcCcCCchHHHHHHHHHcCCC---------eEEEEeccccC
Q 006662 208 IGKLINLKDGSIRTAIDTGCGVASWGAYLMSRN--ILAVSFAPRDTHEAQVQFALERGVP---------ALIGVMASIRL 276 (636)
Q Consensus 208 L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~~--v~vv~i~p~Dis~a~l~~A~erg~~---------~~~~~~d~~~L 276 (636)
+..++...++ .+|||+|||+|.++..++++. ..++++ |+++.+++.|+++... +.+...|....
T Consensus 28 L~~~~~~~~~--~~VLDlG~G~G~~~l~la~~~~~~~v~gv---Di~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~ 102 (260)
T 2ozv_A 28 LASLVADDRA--CRIADLGAGAGAAGMAVAARLEKAEVTLY---ERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLR 102 (260)
T ss_dssp HHHTCCCCSC--EEEEECCSSSSHHHHHHHHHCTTEEEEEE---ESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCC
T ss_pred HHHHhcccCC--CEEEEeCChHhHHHHHHHHhCCCCeEEEE---ECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHH
Confidence 4455544443 489999999999999999884 455555 8999999999865322 77888887766
Q ss_pred -------CCCCCCeeEEEeccccccc-----------------ccChHHHHHHHHhcccCCcEEEEEeC
Q 006662 277 -------PYPSRAFDMAHCSRCLIPW-----------------GQYDGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 277 -------pf~~~sFDlV~~s~~L~h~-----------------~~d~~~~L~el~RvLKPGG~Liis~p 321 (636)
++++++||+|+++..+... ......+++++.++|||||+|++..+
T Consensus 103 ~~~~~~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 171 (260)
T 2ozv_A 103 AKARVEAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISR 171 (260)
T ss_dssp HHHHHHTTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred hhhhhhhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEc
Confidence 3567899999998443211 12246889999999999999999865
No 158
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=98.97 E-value=1.2e-09 Score=116.71 Aligned_cols=95 Identities=18% Similarity=0.133 Sum_probs=77.2
Q ss_pred CcEEEEeCCCCcHHHHHHhhc--CCEEEEcCcCCchHHHHHHHHHcCCCeEEEEeccccCCCCCCCeeEEEecccccccc
Q 006662 219 IRTAIDTGCGVASWGAYLMSR--NILAVSFAPRDTHEAQVQFALERGVPALIGVMASIRLPYPSRAFDMAHCSRCLIPWG 296 (636)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~--~v~vv~i~p~Dis~a~l~~A~erg~~~~~~~~d~~~Lpf~~~sFDlV~~s~~L~h~~ 296 (636)
..+|||||||+|.++..++++ +..++.+ |+ +.+++.++++ ..+.+..+|... |++.+ |+|++..++|+|.
T Consensus 204 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~---D~-~~~~~~a~~~-~~v~~~~~d~~~-~~p~~--D~v~~~~vlh~~~ 275 (368)
T 3reo_A 204 LTTIVDVGGGTGAVASMIVAKYPSINAINF---DL-PHVIQDAPAF-SGVEHLGGDMFD-GVPKG--DAIFIKWICHDWS 275 (368)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTCEEEEE---EC-HHHHTTCCCC-TTEEEEECCTTT-CCCCC--SEEEEESCGGGBC
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCEEEEE---eh-HHHHHhhhhc-CCCEEEecCCCC-CCCCC--CEEEEechhhcCC
Confidence 459999999999999999986 5666666 77 6777666543 468888888776 77754 9999999998887
Q ss_pred cCh-HHHHHHHHhcccCCcEEEEEeC
Q 006662 297 QYD-GLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 297 ~d~-~~~L~el~RvLKPGG~Liis~p 321 (636)
++. ..+|+++.++|||||++++...
T Consensus 276 ~~~~~~~l~~~~~~L~pgG~l~i~e~ 301 (368)
T 3reo_A 276 DEHCLKLLKNCYAALPDHGKVIVAEY 301 (368)
T ss_dssp HHHHHHHHHHHHHHSCTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 443 5899999999999999999864
No 159
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=98.97 E-value=1e-08 Score=103.35 Aligned_cols=95 Identities=18% Similarity=0.176 Sum_probs=74.6
Q ss_pred cEEEEeCCCCcHHHHHHhhc---CCEEEEcCcCCchHHHHHHHHHc----CC--CeEEEEecccc-CCCC--CCCeeEEE
Q 006662 220 RTAIDTGCGVASWGAYLMSR---NILAVSFAPRDTHEAQVQFALER----GV--PALIGVMASIR-LPYP--SRAFDMAH 287 (636)
Q Consensus 220 r~VLDIGCGtG~~a~~La~~---~v~vv~i~p~Dis~a~l~~A~er----g~--~~~~~~~d~~~-Lpf~--~~sFDlV~ 287 (636)
.+|||||||+|..+..+++. +..++++ |+++.+++.|+++ +. .+.+..+|... ++.. .++||+|+
T Consensus 65 ~~VLdiG~G~G~~~~~la~~~~~~~~v~~v---D~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V~ 141 (248)
T 3tfw_A 65 KRILEIGTLGGYSTIWMARELPADGQLLTL---EADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLIF 141 (248)
T ss_dssp SEEEEECCTTSHHHHHHHTTSCTTCEEEEE---ECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEEE
T ss_pred CEEEEecCCchHHHHHHHHhCCCCCEEEEE---ECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEEE
Confidence 39999999999999999987 5667777 8899998888755 43 47888888755 3432 34899999
Q ss_pred ecccccccccChHHHHHHHHhcccCCcEEEEEeC
Q 006662 288 CSRCLIPWGQYDGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 288 ~s~~L~h~~~d~~~~L~el~RvLKPGG~Liis~p 321 (636)
+... ..+...++.++.++|||||++++...
T Consensus 142 ~d~~----~~~~~~~l~~~~~~LkpGG~lv~~~~ 171 (248)
T 3tfw_A 142 IDAD----KPNNPHYLRWALRYSRPGTLIIGDNV 171 (248)
T ss_dssp ECSC----GGGHHHHHHHHHHTCCTTCEEEEECC
T ss_pred ECCc----hHHHHHHHHHHHHhcCCCeEEEEeCC
Confidence 8543 23446899999999999999999754
No 160
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=98.97 E-value=3.7e-09 Score=105.23 Aligned_cols=106 Identities=15% Similarity=0.216 Sum_probs=79.8
Q ss_pred HHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhh--cCCEEEEcCcCCchHHHHHHHHHc----CC--CeEEEEeccccC-
Q 006662 206 DDIGKLINLKDGSIRTAIDTGCGVASWGAYLMS--RNILAVSFAPRDTHEAQVQFALER----GV--PALIGVMASIRL- 276 (636)
Q Consensus 206 d~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~--~~v~vv~i~p~Dis~a~l~~A~er----g~--~~~~~~~d~~~L- 276 (636)
..+..++...++. +|||||||+|.++..|++ .+..++++ |+++.+++.|+++ +. .+.+..+|....
T Consensus 61 ~~l~~~~~~~~~~--~vLDiG~G~G~~~~~la~~~~~~~v~~v---D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 135 (232)
T 3ntv_A 61 DLIKQLIRMNNVK--NILEIGTAIGYSSMQFASISDDIHVTTI---ERNETMIQYAKQNLATYHFENQVRIIEGNALEQF 135 (232)
T ss_dssp HHHHHHHHHHTCC--EEEEECCSSSHHHHHHHTTCTTCEEEEE---ECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCH
T ss_pred HHHHHHHhhcCCC--EEEEEeCchhHHHHHHHHhCCCCEEEEE---ECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHH
Confidence 3444444444444 899999999999999998 35666666 8899998888754 33 588888887553
Q ss_pred C-CCCCCeeEEEecccccccccChHHHHHHHHhcccCCcEEEEEe
Q 006662 277 P-YPSRAFDMAHCSRCLIPWGQYDGLYLIEVDRVLRPGGYWILSG 320 (636)
Q Consensus 277 p-f~~~sFDlV~~s~~L~h~~~d~~~~L~el~RvLKPGG~Liis~ 320 (636)
+ ..+++||+|++... ..+...++.++.++|||||+|++..
T Consensus 136 ~~~~~~~fD~V~~~~~----~~~~~~~l~~~~~~LkpgG~lv~d~ 176 (232)
T 3ntv_A 136 ENVNDKVYDMIFIDAA----KAQSKKFFEIYTPLLKHQGLVITDN 176 (232)
T ss_dssp HHHTTSCEEEEEEETT----SSSHHHHHHHHGGGEEEEEEEEEEC
T ss_pred HhhccCCccEEEEcCc----HHHHHHHHHHHHHhcCCCeEEEEee
Confidence 3 33689999997643 3355789999999999999999864
No 161
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=98.96 E-value=3.3e-09 Score=111.59 Aligned_cols=112 Identities=16% Similarity=0.171 Sum_probs=82.1
Q ss_pred HHHHHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhcCC-EEEEcCcCCchHHHHHHHHH----cCC--CeEEEEeccc
Q 006662 202 DAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNI-LAVSFAPRDTHEAQVQFALE----RGV--PALIGVMASI 274 (636)
Q Consensus 202 ~~~id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~~v-~vv~i~p~Dis~a~l~~A~e----rg~--~~~~~~~d~~ 274 (636)
..+.+.+.+.+...++. +|||||||+|.++..+++.+. .++++ |++ .+++.|++ ++. .+.+...+..
T Consensus 24 ~~y~~ai~~~~~~~~~~--~VLDiGcGtG~ls~~la~~g~~~v~~v---D~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~ 97 (328)
T 1g6q_1 24 LSYRNAIIQNKDLFKDK--IVLDVGCGTGILSMFAAKHGAKHVIGV---DMS-SIIEMAKELVELNGFSDKITLLRGKLE 97 (328)
T ss_dssp HHHHHHHHHHHHHHTTC--EEEEETCTTSHHHHHHHHTCCSEEEEE---ESS-THHHHHHHHHHHTTCTTTEEEEESCTT
T ss_pred HHHHHHHHhhHhhcCCC--EEEEecCccHHHHHHHHHCCCCEEEEE---ChH-HHHHHHHHHHHHcCCCCCEEEEECchh
Confidence 44555565555445555 899999999999999998864 56666 556 35555543 343 4788889998
Q ss_pred cCCCCCCCeeEEEecccccc--cccChHHHHHHHHhcccCCcEEEEE
Q 006662 275 RLPYPSRAFDMAHCSRCLIP--WGQYDGLYLIEVDRVLRPGGYWILS 319 (636)
Q Consensus 275 ~Lpf~~~sFDlV~~s~~L~h--~~~d~~~~L~el~RvLKPGG~Liis 319 (636)
.+++++++||+|++...... .......++.++.++|||||.++..
T Consensus 98 ~~~~~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li~~ 144 (328)
T 1g6q_1 98 DVHLPFPKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIFPD 144 (328)
T ss_dssp TSCCSSSCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred hccCCCCcccEEEEeCchhhcccHHHHHHHHHHHHhhcCCCeEEEEe
Confidence 88888889999999754322 2334578999999999999999843
No 162
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=98.96 E-value=1.8e-09 Score=107.33 Aligned_cols=107 Identities=17% Similarity=0.186 Sum_probs=80.9
Q ss_pred HHHHHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhcC-CEEEEcCcCCchHHHHHHHHHc----CC-CeEEEEecccc
Q 006662 202 DAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRN-ILAVSFAPRDTHEAQVQFALER----GV-PALIGVMASIR 275 (636)
Q Consensus 202 ~~~id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~~-v~vv~i~p~Dis~a~l~~A~er----g~-~~~~~~~d~~~ 275 (636)
......+.+.+...++. +|||||||+|.++..+++.. ..++.+ |+++.+++.|+++ +. ++.+...|. .
T Consensus 77 ~~~~~~~~~~l~~~~~~--~vLdiG~G~G~~~~~la~~~~~~v~~v---D~~~~~~~~a~~~~~~~~~~~v~~~~~d~-~ 150 (235)
T 1jg1_A 77 PHMVAIMLEIANLKPGM--NILEVGTGSGWNAALISEIVKTDVYTI---ERIPELVEFAKRNLERAGVKNVHVILGDG-S 150 (235)
T ss_dssp HHHHHHHHHHHTCCTTC--CEEEECCTTSHHHHHHHHHHCSCEEEE---ESCHHHHHHHHHHHHHTTCCSEEEEESCG-G
T ss_pred HHHHHHHHHhcCCCCCC--EEEEEeCCcCHHHHHHHHHhCCEEEEE---eCCHHHHHHHHHHHHHcCCCCcEEEECCc-c
Confidence 33455666666655555 89999999999999999874 555566 8888888888754 32 477777776 4
Q ss_pred CCCCCC-CeeEEEecccccccccChHHHHHHHHhcccCCcEEEEEeC
Q 006662 276 LPYPSR-AFDMAHCSRCLIPWGQYDGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 276 Lpf~~~-sFDlV~~s~~L~h~~~d~~~~L~el~RvLKPGG~Liis~p 321 (636)
.+++++ .||+|++..++.++. .++.++|||||.+++..+
T Consensus 151 ~~~~~~~~fD~Ii~~~~~~~~~-------~~~~~~L~pgG~lvi~~~ 190 (235)
T 1jg1_A 151 KGFPPKAPYDVIIVTAGAPKIP-------EPLIEQLKIGGKLIIPVG 190 (235)
T ss_dssp GCCGGGCCEEEEEECSBBSSCC-------HHHHHTEEEEEEEEEEEC
T ss_pred cCCCCCCCccEEEECCcHHHHH-------HHHHHhcCCCcEEEEEEe
Confidence 555544 499999998885554 478999999999999976
No 163
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=98.96 E-value=1.6e-09 Score=115.57 Aligned_cols=95 Identities=21% Similarity=0.169 Sum_probs=77.3
Q ss_pred CcEEEEeCCCCcHHHHHHhhc--CCEEEEcCcCCchHHHHHHHHHcCCCeEEEEeccccCCCCCCCeeEEEecccccccc
Q 006662 219 IRTAIDTGCGVASWGAYLMSR--NILAVSFAPRDTHEAQVQFALERGVPALIGVMASIRLPYPSRAFDMAHCSRCLIPWG 296 (636)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~--~v~vv~i~p~Dis~a~l~~A~erg~~~~~~~~d~~~Lpf~~~sFDlV~~s~~L~h~~ 296 (636)
..+|||||||+|.++..++++ +..++.+ |+ +.+++.|++. ..+.+..+|... |++.+ |+|++..++++|.
T Consensus 202 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~---D~-~~~~~~a~~~-~~v~~~~~D~~~-~~p~~--D~v~~~~vlh~~~ 273 (364)
T 3p9c_A 202 LGTLVDVGGGVGATVAAIAAHYPTIKGVNF---DL-PHVISEAPQF-PGVTHVGGDMFK-EVPSG--DTILMKWILHDWS 273 (364)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTCEEEEE---EC-HHHHTTCCCC-TTEEEEECCTTT-CCCCC--SEEEEESCGGGSC
T ss_pred CCEEEEeCCCCCHHHHHHHHHCCCCeEEEe---cC-HHHHHhhhhc-CCeEEEeCCcCC-CCCCC--CEEEehHHhccCC
Confidence 359999999999999999986 5566666 77 6677666443 468899889877 77754 9999999998886
Q ss_pred cCh-HHHHHHHHhcccCCcEEEEEeC
Q 006662 297 QYD-GLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 297 ~d~-~~~L~el~RvLKPGG~Liis~p 321 (636)
++. ..+|+++.++|||||+|++...
T Consensus 274 d~~~~~~L~~~~~~L~pgG~l~i~e~ 299 (364)
T 3p9c_A 274 DQHCATLLKNCYDALPAHGKVVLVQC 299 (364)
T ss_dssp HHHHHHHHHHHHHHSCTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 433 6899999999999999999864
No 164
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=98.95 E-value=2.2e-09 Score=105.61 Aligned_cols=104 Identities=20% Similarity=0.141 Sum_probs=79.4
Q ss_pred HHHHHhhc--cCCCCCcEEEEeCCCCcHHHHHHhhcC-------CEEEEcCcCCchHHHHHHHHHc----C------CCe
Q 006662 206 DDIGKLIN--LKDGSIRTAIDTGCGVASWGAYLMSRN-------ILAVSFAPRDTHEAQVQFALER----G------VPA 266 (636)
Q Consensus 206 d~L~~lL~--l~~g~~r~VLDIGCGtG~~a~~La~~~-------v~vv~i~p~Dis~a~l~~A~er----g------~~~ 266 (636)
..+.+.+. ..++. +|||||||+|.++..+++.. ..++++ |+++.+++.|+++ + .++
T Consensus 68 ~~~~~~l~~~~~~~~--~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~v---D~~~~~~~~a~~~~~~~~~~~~~~~~v 142 (227)
T 2pbf_A 68 ALSLKRLINVLKPGS--RAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGL---ERVKDLVNFSLENIKRDKPELLKIDNF 142 (227)
T ss_dssp HHHHHHHTTTSCTTC--EEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEE---ESCHHHHHHHHHHHHHHCGGGGSSTTE
T ss_pred HHHHHHHHhhCCCCC--EEEEECCCCCHHHHHHHHHhcccCCCCCEEEEE---eCCHHHHHHHHHHHHHcCccccccCCE
Confidence 34444442 33444 99999999999999999864 366677 8888888888754 2 357
Q ss_pred EEEEeccccCC----CCCCCeeEEEecccccccccChHHHHHHHHhcccCCcEEEEEeC
Q 006662 267 LIGVMASIRLP----YPSRAFDMAHCSRCLIPWGQYDGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 267 ~~~~~d~~~Lp----f~~~sFDlV~~s~~L~h~~~d~~~~L~el~RvLKPGG~Liis~p 321 (636)
.+...|..... ...++||+|++...+.+. +.++.++|||||++++..+
T Consensus 143 ~~~~~d~~~~~~~~~~~~~~fD~I~~~~~~~~~-------~~~~~~~LkpgG~lv~~~~ 194 (227)
T 2pbf_A 143 KIIHKNIYQVNEEEKKELGLFDAIHVGASASEL-------PEILVDLLAENGKLIIPIE 194 (227)
T ss_dssp EEEECCGGGCCHHHHHHHCCEEEEEECSBBSSC-------CHHHHHHEEEEEEEEEEEE
T ss_pred EEEECChHhcccccCccCCCcCEEEECCchHHH-------HHHHHHhcCCCcEEEEEEc
Confidence 88888877755 556789999998887543 3788999999999999865
No 165
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=98.95 E-value=2.4e-09 Score=113.17 Aligned_cols=108 Identities=20% Similarity=0.278 Sum_probs=80.4
Q ss_pred HHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhc--CCEEEEcCcCCchHHHHHHHHHc----CC--CeEEEEeccccCCC
Q 006662 207 DIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR--NILAVSFAPRDTHEAQVQFALER----GV--PALIGVMASIRLPY 278 (636)
Q Consensus 207 ~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~--~v~vv~i~p~Dis~a~l~~A~er----g~--~~~~~~~d~~~Lpf 278 (636)
.+.+.++..++ .+|||||||+|.++..++++ ++.++++ |+ +.+++.|+++ +. .+.+...|... ++
T Consensus 174 ~l~~~~~~~~~--~~vLDvG~G~G~~~~~l~~~~~~~~~~~~---D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~ 246 (360)
T 1tw3_A 174 APAAAYDWTNV--RHVLDVGGGKGGFAAAIARRAPHVSATVL---EM-AGTVDTARSYLKDEGLSDRVDVVEGDFFE-PL 246 (360)
T ss_dssp HHHHHSCCTTC--SEEEEETCTTSHHHHHHHHHCTTCEEEEE---EC-TTHHHHHHHHHHHTTCTTTEEEEECCTTS-CC
T ss_pred HHHHhCCCccC--cEEEEeCCcCcHHHHHHHHhCCCCEEEEe---cC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-CC
Confidence 34444444444 49999999999999999987 4566666 65 5666666543 33 57888888754 44
Q ss_pred CCCCeeEEEecccccccccCh-HHHHHHHHhcccCCcEEEEEeCC
Q 006662 279 PSRAFDMAHCSRCLIPWGQYD-GLYLIEVDRVLRPGGYWILSGPP 322 (636)
Q Consensus 279 ~~~sFDlV~~s~~L~h~~~d~-~~~L~el~RvLKPGG~Liis~p~ 322 (636)
+. .||+|++..++++|.+.. ..+++++.++|||||++++..+.
T Consensus 247 ~~-~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 247 PR-KADAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp SS-CEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CC-CccEEEEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 44 499999999998876332 58999999999999999998763
No 166
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=98.94 E-value=1.9e-09 Score=106.94 Aligned_cols=94 Identities=11% Similarity=0.114 Sum_probs=71.3
Q ss_pred cEEEEeCCCCcHHHHHHhhc---CCEEEEcCcCCchHHH----HHHHHHcCCCeEEEEecccc---CCCCCCCeeEEEec
Q 006662 220 RTAIDTGCGVASWGAYLMSR---NILAVSFAPRDTHEAQ----VQFALERGVPALIGVMASIR---LPYPSRAFDMAHCS 289 (636)
Q Consensus 220 r~VLDIGCGtG~~a~~La~~---~v~vv~i~p~Dis~a~----l~~A~erg~~~~~~~~d~~~---Lpf~~~sFDlV~~s 289 (636)
.+|||+|||+|.++..|+++ +..++++ |+++.+ ++.|+++ .++.+..+|... +++.+++||+|++.
T Consensus 79 ~~vLDlG~G~G~~~~~la~~~g~~~~v~gv---D~s~~~i~~~~~~a~~~-~~v~~~~~d~~~~~~~~~~~~~~D~V~~~ 154 (233)
T 2ipx_A 79 AKVLYLGAASGTTVSHVSDIVGPDGLVYAV---EFSHRSGRDLINLAKKR-TNIIPVIEDARHPHKYRMLIAMVDVIFAD 154 (233)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTCEEEEE---CCCHHHHHHHHHHHHHC-TTEEEECSCTTCGGGGGGGCCCEEEEEEC
T ss_pred CEEEEEcccCCHHHHHHHHHhCCCcEEEEE---ECCHHHHHHHHHHhhcc-CCeEEEEcccCChhhhcccCCcEEEEEEc
Confidence 49999999999999999987 2566666 888664 4444443 567888888766 45567899999995
Q ss_pred ccccccccCh-HHHHHHHHhcccCCcEEEEEeC
Q 006662 290 RCLIPWGQYD-GLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 290 ~~L~h~~~d~-~~~L~el~RvLKPGG~Liis~p 321 (636)
.. ..+. ..++.++.++|||||+++++..
T Consensus 155 ~~----~~~~~~~~~~~~~~~LkpgG~l~i~~~ 183 (233)
T 2ipx_A 155 VA----QPDQTRIVALNAHTFLRNGGHFVISIK 183 (233)
T ss_dssp CC----CTTHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CC----CccHHHHHHHHHHHHcCCCeEEEEEEc
Confidence 43 2233 5568899999999999999754
No 167
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=98.94 E-value=4.5e-09 Score=104.38 Aligned_cols=105 Identities=18% Similarity=0.081 Sum_probs=82.3
Q ss_pred HHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhcCCEEEEcCcCCchHHHHHHHHHc----C--CCeEEEEeccccCCCC
Q 006662 206 DDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALER----G--VPALIGVMASIRLPYP 279 (636)
Q Consensus 206 d~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~~v~vv~i~p~Dis~a~l~~A~er----g--~~~~~~~~d~~~Lpf~ 279 (636)
..+.+.+...++. +|||+|||+|.++..+++.+..++.+ |+++.+++.|+++ + ..+.+...|.....++
T Consensus 81 ~~~~~~~~~~~~~--~vldiG~G~G~~~~~l~~~~~~v~~v---D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~ 155 (248)
T 2yvl_A 81 FYIALKLNLNKEK--RVLEFGTGSGALLAVLSEVAGEVWTF---EAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVP 155 (248)
T ss_dssp HHHHHHTTCCTTC--EEEEECCTTSHHHHHHHHHSSEEEEE---CSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCC
T ss_pred HHHHHhcCCCCCC--EEEEeCCCccHHHHHHHHhCCEEEEE---ecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccC
Confidence 3555566555555 99999999999999999886666677 8899999888764 3 3577777777664436
Q ss_pred CCCeeEEEecccccccccChHHHHHHHHhcccCCcEEEEEeC
Q 006662 280 SRAFDMAHCSRCLIPWGQYDGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 280 ~~sFDlV~~s~~L~h~~~d~~~~L~el~RvLKPGG~Liis~p 321 (636)
+++||+|++.. +++..++.++.++|||||.+++..+
T Consensus 156 ~~~~D~v~~~~------~~~~~~l~~~~~~L~~gG~l~~~~~ 191 (248)
T 2yvl_A 156 EGIFHAAFVDV------REPWHYLEKVHKSLMEGAPVGFLLP 191 (248)
T ss_dssp TTCBSEEEECS------SCGGGGHHHHHHHBCTTCEEEEEES
T ss_pred CCcccEEEECC------cCHHHHHHHHHHHcCCCCEEEEEeC
Confidence 67899999832 3566889999999999999999976
No 168
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=98.94 E-value=1.7e-09 Score=108.63 Aligned_cols=114 Identities=11% Similarity=-0.055 Sum_probs=77.9
Q ss_pred HHHHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhc----CCEEEEcCcCCchHHHHHHHHHcC--C-------C----
Q 006662 203 AYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR----NILAVSFAPRDTHEAQVQFALERG--V-------P---- 265 (636)
Q Consensus 203 ~~id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~----~v~vv~i~p~Dis~a~l~~A~erg--~-------~---- 265 (636)
..++.+.+.+.. ....+|||+|||+|.++..+++. +..++++ |+++.+++.|+++. . .
T Consensus 38 ~l~~~~l~~~~~--~~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gv---Dis~~~l~~A~~~~~~~~~~~~~~~~~~~ 112 (250)
T 1o9g_A 38 EIFQRALARLPG--DGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIAS---DVDPAPLELAAKNLALLSPAGLTARELER 112 (250)
T ss_dssp HHHHHHHHTSSC--CSCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEE---ESCHHHHHHHHHHHHTTSHHHHHHHHHHH
T ss_pred HHHHHHHHhccc--CCCCeEEECCCCCCHHHHHHHHHhccCCCeEEEE---ECCHHHHHHHHHHHHHhhhccccccchhh
Confidence 344444443321 23458999999999999999876 3445555 88999988887431 1 1
Q ss_pred ---------------------eE-------------EEEeccccCCC-----CCCCeeEEEeccccccccc--------C
Q 006662 266 ---------------------AL-------------IGVMASIRLPY-----PSRAFDMAHCSRCLIPWGQ--------Y 298 (636)
Q Consensus 266 ---------------------~~-------------~~~~d~~~Lpf-----~~~sFDlV~~s~~L~h~~~--------d 298 (636)
+. +...|...... ..++||+|+|+..+++... .
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~ 192 (250)
T 1o9g_A 113 REQSERFGKPSYLEAAQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQP 192 (250)
T ss_dssp HHHHHHHCCHHHHHHHHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHH
T ss_pred hhhhhhcccccchhhhhhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccH
Confidence 33 77777655321 3458999999876644332 1
Q ss_pred hHHHHHHHHhcccCCcEEEEEeC
Q 006662 299 DGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 299 ~~~~L~el~RvLKPGG~Liis~p 321 (636)
...++.++.++|+|||+++++..
T Consensus 193 ~~~~l~~~~~~LkpgG~l~~~~~ 215 (250)
T 1o9g_A 193 VAGLLRSLASALPAHAVIAVTDR 215 (250)
T ss_dssp HHHHHHHHHHHSCTTCEEEEEES
T ss_pred HHHHHHHHHHhcCCCcEEEEeCc
Confidence 25899999999999999999644
No 169
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=98.94 E-value=8.9e-10 Score=110.64 Aligned_cols=95 Identities=13% Similarity=0.065 Sum_probs=72.8
Q ss_pred cEEEEeCCCCcHHHHHHhhc------CCEEEEcCcCCchHHHHHHHHHcCCCeEEEEeccccC---CCCC-CCeeEEEec
Q 006662 220 RTAIDTGCGVASWGAYLMSR------NILAVSFAPRDTHEAQVQFALERGVPALIGVMASIRL---PYPS-RAFDMAHCS 289 (636)
Q Consensus 220 r~VLDIGCGtG~~a~~La~~------~v~vv~i~p~Dis~a~l~~A~erg~~~~~~~~d~~~L---pf~~-~sFDlV~~s 289 (636)
.+|||||||+|..+..|++. +..++++ |+++.+++.|+....++.+..+|.... ++.. .+||+|++.
T Consensus 83 ~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gv---D~s~~~l~~a~~~~~~v~~~~gD~~~~~~l~~~~~~~fD~I~~d 159 (236)
T 2bm8_A 83 RTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGI---DRDLSRCQIPASDMENITLHQGDCSDLTTFEHLREMAHPLIFID 159 (236)
T ss_dssp SEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEE---ESCCTTCCCCGGGCTTEEEEECCSSCSGGGGGGSSSCSSEEEEE
T ss_pred CEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEE---eCChHHHHHHhccCCceEEEECcchhHHHHHhhccCCCCEEEEC
Confidence 38999999999999999886 5566666 667777666654445688888888774 5433 479999986
Q ss_pred ccccccccChHHHHHHHHh-cccCCcEEEEEeC
Q 006662 290 RCLIPWGQYDGLYLIEVDR-VLRPGGYWILSGP 321 (636)
Q Consensus 290 ~~L~h~~~d~~~~L~el~R-vLKPGG~Liis~p 321 (636)
.. | .+...++.++.| +|||||+|++...
T Consensus 160 ~~--~--~~~~~~l~~~~r~~LkpGG~lv~~d~ 188 (236)
T 2bm8_A 160 NA--H--ANTFNIMKWAVDHLLEEGDYFIIEDM 188 (236)
T ss_dssp SS--C--SSHHHHHHHHHHHTCCTTCEEEECSC
T ss_pred Cc--h--HhHHHHHHHHHHhhCCCCCEEEEEeC
Confidence 54 3 256789999998 9999999999753
No 170
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=98.93 E-value=8.5e-09 Score=105.17 Aligned_cols=104 Identities=20% Similarity=0.259 Sum_probs=82.3
Q ss_pred HHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhc---CCEEEEcCcCCchHHHHHHHHHc----CC--CeEEEEeccccC
Q 006662 206 DDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR---NILAVSFAPRDTHEAQVQFALER----GV--PALIGVMASIRL 276 (636)
Q Consensus 206 d~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~---~v~vv~i~p~Dis~a~l~~A~er----g~--~~~~~~~d~~~L 276 (636)
..+.+.+...++. +|||+|||+|.++..+++. +..++.+ |+++.+++.|+++ +. .+.+...|....
T Consensus 102 ~~i~~~~~~~~~~--~VLDiG~G~G~~~~~la~~~~~~~~v~~v---D~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 176 (277)
T 1o54_A 102 SFIAMMLDVKEGD--RIIDTGVGSGAMCAVLARAVGSSGKVFAY---EKREEFAKLAESNLTKWGLIERVTIKVRDISEG 176 (277)
T ss_dssp HHHHHHTTCCTTC--EEEEECCTTSHHHHHHHHHTTTTCEEEEE---CCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC
T ss_pred HHHHHHhCCCCCC--EEEEECCcCCHHHHHHHHHhCCCcEEEEE---ECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc
Confidence 4555666655555 9999999999999999987 4566777 8899999888765 33 577777777665
Q ss_pred CCCCCCeeEEEecccccccccChHHHHHHHHhcccCCcEEEEEeC
Q 006662 277 PYPSRAFDMAHCSRCLIPWGQYDGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 277 pf~~~sFDlV~~s~~L~h~~~d~~~~L~el~RvLKPGG~Liis~p 321 (636)
+++++||+|++.. +++..++.++.++|+|||.+++..+
T Consensus 177 -~~~~~~D~V~~~~------~~~~~~l~~~~~~L~pgG~l~~~~~ 214 (277)
T 1o54_A 177 -FDEKDVDALFLDV------PDPWNYIDKCWEALKGGGRFATVCP 214 (277)
T ss_dssp -CSCCSEEEEEECC------SCGGGTHHHHHHHEEEEEEEEEEES
T ss_pred -ccCCccCEEEECC------cCHHHHHHHHHHHcCCCCEEEEEeC
Confidence 6677899999842 3556899999999999999999975
No 171
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=98.93 E-value=2.3e-09 Score=104.30 Aligned_cols=136 Identities=18% Similarity=0.204 Sum_probs=98.3
Q ss_pred cceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhhcccchhhcccccc---CCCC-CccceeeeccccccC
Q 006662 477 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERGLIGTYQNWCEAM---STYP-RTYDLIHADSIFSLY 552 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRgli~~~~~~ce~~---~~yp-~t~Dl~H~~~~fs~~ 552 (636)
..+|||+|||.|.++.+|++.+. +|+.+|.++.++..+.+++.+.....-.+.+ ...+ .+||+|.+..++.
T Consensus 53 ~~~vLdiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~~l~-- 127 (227)
T 3e8s_A 53 PERVLDLGCGEGWLLRALADRGI---EAVGVDGDRTLVDAARAAGAGEVHLASYAQLAEAKVPVGKDYDLICANFALL-- 127 (227)
T ss_dssp CSEEEEETCTTCHHHHHHHTTTC---EEEEEESCHHHHHHHHHTCSSCEEECCHHHHHTTCSCCCCCEEEEEEESCCC--
T ss_pred CCEEEEeCCCCCHHHHHHHHCCC---EEEEEcCCHHHHHHHHHhcccccchhhHHhhcccccccCCCccEEEECchhh--
Confidence 48999999999999999999865 6677788888999999996544433111222 2234 5699999988777
Q ss_pred CCCcCHHHHHHHHhhcccCCcEEEEEeCH--------------------------------HHHHHHHHHHhcCCCceEE
Q 006662 553 KDRCEMEDVLLEMDRILRPEGSVIIRDDV--------------------------------DILVKIKSITDGMEWEGRI 600 (636)
Q Consensus 553 ~~~c~~~~~l~e~dRiLrPgG~~i~~d~~--------------------------------~~~~~~~~~~~~~~W~~~~ 600 (636)
..+...+|-++-|+|||||++++.+.. -....+.++++.-.+++.-
T Consensus 128 --~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~ 205 (227)
T 3e8s_A 128 --HQDIIELLSAMRTLLVPGGALVIQTLHPWSVADGDYQDGWREESFAGFAGDWQPMPWYFRTLASWLNALDMAGLRLVS 205 (227)
T ss_dssp --SSCCHHHHHHHHHTEEEEEEEEEEECCTTTTCTTCCSCEEEEECCTTSSSCCCCEEEEECCHHHHHHHHHHTTEEEEE
T ss_pred --hhhHHHHHHHHHHHhCCCeEEEEEecCccccCccccccccchhhhhccccCcccceEEEecHHHHHHHHHHcCCeEEE
Confidence 246689999999999999999997531 0457888888888888875
Q ss_pred eccCCCCC---CcceEEEEEec
Q 006662 601 ADHENGPR---QREKILFANKK 619 (636)
Q Consensus 601 ~~~e~~~~---~~~~~l~~~K~ 619 (636)
+.....+. ...-+++++|+
T Consensus 206 ~~~~~~~~~~~~~~~~~va~k~ 227 (227)
T 3e8s_A 206 LQEPQHPQSAVPQSLLMVAERH 227 (227)
T ss_dssp EECCCCTTCSSCSCEEEEEEEC
T ss_pred EecCCCCCCCCceeEEEEeecC
Confidence 43221111 13456777774
No 172
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=98.92 E-value=4e-09 Score=115.28 Aligned_cols=113 Identities=15% Similarity=0.145 Sum_probs=80.4
Q ss_pred HHHHHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhc-C-CEEEEcCcCCchHHHHHHH-------HHc----C---CC
Q 006662 202 DAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR-N-ILAVSFAPRDTHEAQVQFA-------LER----G---VP 265 (636)
Q Consensus 202 ~~~id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~-~-v~vv~i~p~Dis~a~l~~A-------~er----g---~~ 265 (636)
...+..+.+.+...++. +|||||||+|.++..+++. + ..++++ |+++.+++.| +++ + .+
T Consensus 228 p~~v~~ml~~l~l~~g~--~VLDLGCGsG~la~~LA~~~g~~~V~GV---Dis~~~l~~A~~Ml~~ar~~~~~~Gl~~~n 302 (433)
T 1u2z_A 228 PNFLSDVYQQCQLKKGD--TFMDLGSGVGNCVVQAALECGCALSFGC---EIMDDASDLTILQYEELKKRCKLYGMRLNN 302 (433)
T ss_dssp HHHHHHHHHHTTCCTTC--EEEEESCTTSHHHHHHHHHHCCSEEEEE---ECCHHHHHHHHHHHHHHHHHHHHTTBCCCC
T ss_pred HHHHHHHHHhcCCCCCC--EEEEeCCCcCHHHHHHHHHCCCCEEEEE---eCCHHHHHHHHHhHHHHHHHHHHcCCCCCc
Confidence 34455666666655555 9999999999999999986 3 345666 7777776666 433 4 35
Q ss_pred eEEEEeccccCC--C--CCCCeeEEEecccccccccChHHHHHHHHhcccCCcEEEEEeC
Q 006662 266 ALIGVMASIRLP--Y--PSRAFDMAHCSRCLIPWGQYDGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 266 ~~~~~~d~~~Lp--f--~~~sFDlV~~s~~L~h~~~d~~~~L~el~RvLKPGG~Liis~p 321 (636)
+.+..++....+ + ..++||+|+++..+ +.++...+|.++.++|||||.+++..+
T Consensus 303 V~~i~gD~~~~~~~~~~~~~~FDvIvvn~~l--~~~d~~~~L~el~r~LKpGG~lVi~d~ 360 (433)
T 1u2z_A 303 VEFSLKKSFVDNNRVAELIPQCDVILVNNFL--FDEDLNKKVEKILQTAKVGCKIISLKS 360 (433)
T ss_dssp EEEEESSCSTTCHHHHHHGGGCSEEEECCTT--CCHHHHHHHHHHHTTCCTTCEEEESSC
T ss_pred eEEEEcCccccccccccccCCCCEEEEeCcc--ccccHHHHHHHHHHhCCCCeEEEEeec
Confidence 677665543221 2 24689999997666 334667889999999999999999854
No 173
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=98.92 E-value=2e-09 Score=103.64 Aligned_cols=92 Identities=13% Similarity=0.134 Sum_probs=66.5
Q ss_pred cEEEEeCCCCcHHHHHHhhc----CCEEEEcCcCCchHHHHHHHHHcCCCeEEEEeccccCC------------------
Q 006662 220 RTAIDTGCGVASWGAYLMSR----NILAVSFAPRDTHEAQVQFALERGVPALIGVMASIRLP------------------ 277 (636)
Q Consensus 220 r~VLDIGCGtG~~a~~La~~----~v~vv~i~p~Dis~a~l~~A~erg~~~~~~~~d~~~Lp------------------ 277 (636)
.+|||+|||+|.++..++++ +..++++ |+++.+ ....+.+..+|....+
T Consensus 24 ~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gv---D~s~~~------~~~~v~~~~~d~~~~~~~~~~~~~~i~~~~~~~~ 94 (201)
T 2plw_A 24 KIILDIGCYPGSWCQVILERTKNYKNKIIGI---DKKIMD------PIPNVYFIQGEIGKDNMNNIKNINYIDNMNNNSV 94 (201)
T ss_dssp EEEEEESCTTCHHHHHHHHHTTTSCEEEEEE---ESSCCC------CCTTCEEEECCTTTTSSCCC-----------CHH
T ss_pred CEEEEeCCCCCHHHHHHHHHcCCCCceEEEE---eCCccC------CCCCceEEEccccchhhhhhccccccccccchhh
Confidence 48999999999999999976 2444555 444311 1234677888877766
Q ss_pred -------CCCCCeeEEEeccccccccc----Ch-------HHHHHHHHhcccCCcEEEEEeC
Q 006662 278 -------YPSRAFDMAHCSRCLIPWGQ----YD-------GLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 278 -------f~~~sFDlV~~s~~L~h~~~----d~-------~~~L~el~RvLKPGG~Liis~p 321 (636)
+++++||+|++..++ ++.. +. ..++.++.++|||||.|++...
T Consensus 95 ~~~~~~~~~~~~fD~v~~~~~~-~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 155 (201)
T 2plw_A 95 DYKLKEILQDKKIDIILSDAAV-PCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMY 155 (201)
T ss_dssp HHHHHHHHTTCCEEEEEECCCC-CCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHhhcCCCcccEEEeCCCc-CCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEe
Confidence 567799999998776 4421 11 1378899999999999999753
No 174
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=98.91 E-value=1.6e-08 Score=100.46 Aligned_cols=93 Identities=14% Similarity=0.139 Sum_probs=72.6
Q ss_pred EEEEeCCCCcHHHHHHhhc---CCEEEEcCcCCchHHHHHHHHHc----CC---CeEEEEeccccC-C-CCCCCeeEEEe
Q 006662 221 TAIDTGCGVASWGAYLMSR---NILAVSFAPRDTHEAQVQFALER----GV---PALIGVMASIRL-P-YPSRAFDMAHC 288 (636)
Q Consensus 221 ~VLDIGCGtG~~a~~La~~---~v~vv~i~p~Dis~a~l~~A~er----g~---~~~~~~~d~~~L-p-f~~~sFDlV~~ 288 (636)
+|||||||+|..+..|++. +..++.+ |+++.+++.|+++ +. .+.+..+|.... + +++++||+|++
T Consensus 59 ~vLdiG~G~G~~~~~la~~~~~~~~v~~v---D~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~V~~ 135 (221)
T 3dr5_A 59 GAIAITPAAGLVGLYILNGLADNTTLTCI---DPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQLVFG 135 (221)
T ss_dssp EEEEESTTHHHHHHHHHHHSCTTSEEEEE---CSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEEEEE
T ss_pred CEEEEcCCchHHHHHHHHhCCCCCEEEEE---ECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCeEEE
Confidence 8999999999999999985 5566777 8899998888654 33 377887776543 2 34689999998
Q ss_pred cccccccccChHHHHHHHHhcccCCcEEEEEe
Q 006662 289 SRCLIPWGQYDGLYLIEVDRVLRPGGYWILSG 320 (636)
Q Consensus 289 s~~L~h~~~d~~~~L~el~RvLKPGG~Liis~ 320 (636)
.... .+...++.++.++|||||++++..
T Consensus 136 d~~~----~~~~~~l~~~~~~LkpGG~lv~dn 163 (221)
T 3dr5_A 136 QVSP----MDLKALVDAAWPLLRRGGALVLAD 163 (221)
T ss_dssp CCCT----TTHHHHHHHHHHHEEEEEEEEETT
T ss_pred cCcH----HHHHHHHHHHHHHcCCCcEEEEeC
Confidence 6432 344679999999999999999964
No 175
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=98.91 E-value=3e-09 Score=104.76 Aligned_cols=108 Identities=15% Similarity=0.104 Sum_probs=77.3
Q ss_pred HHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhc---CCEEEEcCcCCchHHHHHHHHHc----CC--CeEEEEecccc-C
Q 006662 207 DIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR---NILAVSFAPRDTHEAQVQFALER----GV--PALIGVMASIR-L 276 (636)
Q Consensus 207 ~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~---~v~vv~i~p~Dis~a~l~~A~er----g~--~~~~~~~d~~~-L 276 (636)
.+..++...++. +|||||||+|..+..+++. +..++++ |+++.+++.|+++ +. .+.+..+|... +
T Consensus 49 ~l~~l~~~~~~~--~vLdiG~G~G~~~~~la~~~~~~~~v~~v---D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l 123 (221)
T 3u81_A 49 IMDAVIREYSPS--LVLELGAYCGYSAVRMARLLQPGARLLTM---EINPDCAAITQQMLNFAGLQDKVTILNGASQDLI 123 (221)
T ss_dssp HHHHHHHHHCCS--EEEEECCTTSHHHHHHHTTSCTTCEEEEE---ESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHG
T ss_pred HHHHHHHhcCCC--EEEEECCCCCHHHHHHHHhCCCCCEEEEE---eCChHHHHHHHHHHHHcCCCCceEEEECCHHHHH
Confidence 334444333444 8999999999999999984 5666677 8899998888754 33 37888888644 3
Q ss_pred CCC-----CCCeeEEEecccccccccChHHHHHHHHhcccCCcEEEEEeC
Q 006662 277 PYP-----SRAFDMAHCSRCLIPWGQYDGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 277 pf~-----~~sFDlV~~s~~L~h~~~d~~~~L~el~RvLKPGG~Liis~p 321 (636)
+.. .++||+|++.....++. +...++.++ ++|||||++++...
T Consensus 124 ~~~~~~~~~~~fD~V~~d~~~~~~~-~~~~~~~~~-~~LkpgG~lv~~~~ 171 (221)
T 3u81_A 124 PQLKKKYDVDTLDMVFLDHWKDRYL-PDTLLLEKC-GLLRKGTVLLADNV 171 (221)
T ss_dssp GGTTTTSCCCCCSEEEECSCGGGHH-HHHHHHHHT-TCCCTTCEEEESCC
T ss_pred HHHHHhcCCCceEEEEEcCCcccch-HHHHHHHhc-cccCCCeEEEEeCC
Confidence 322 27899999977664443 334567777 99999999998753
No 176
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=98.91 E-value=4.1e-09 Score=104.41 Aligned_cols=107 Identities=13% Similarity=0.193 Sum_probs=81.6
Q ss_pred HHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhc--CCEEEEcCcCCchHHHHHHHHHc----CC--CeEEEEeccccC
Q 006662 205 IDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR--NILAVSFAPRDTHEAQVQFALER----GV--PALIGVMASIRL 276 (636)
Q Consensus 205 id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~--~v~vv~i~p~Dis~a~l~~A~er----g~--~~~~~~~d~~~L 276 (636)
...+..++...++. +|||||||+|.++..+++. +..++.+ |+++.+++.|+++ +. .+.+..+|....
T Consensus 43 ~~~l~~~~~~~~~~--~vLdiG~G~G~~~~~la~~~~~~~v~~v---D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 117 (233)
T 2gpy_A 43 MESLLHLLKMAAPA--RILEIGTAIGYSAIRMAQALPEATIVSI---ERDERRYEEAHKHVKALGLESRIELLFGDALQL 117 (233)
T ss_dssp HHHHHHHHHHHCCS--EEEEECCTTSHHHHHHHHHCTTCEEEEE---CCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGS
T ss_pred HHHHHHHHhccCCC--EEEEecCCCcHHHHHHHHHCCCCEEEEE---ECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHH
Confidence 34444555444444 8999999999999999987 5666677 8899999888765 43 477887776653
Q ss_pred -CCC--CCCeeEEEecccccccccChHHHHHHHHhcccCCcEEEEEe
Q 006662 277 -PYP--SRAFDMAHCSRCLIPWGQYDGLYLIEVDRVLRPGGYWILSG 320 (636)
Q Consensus 277 -pf~--~~sFDlV~~s~~L~h~~~d~~~~L~el~RvLKPGG~Liis~ 320 (636)
+.. +++||+|++.... .+...++.++.++|||||.+++..
T Consensus 118 ~~~~~~~~~fD~I~~~~~~----~~~~~~l~~~~~~L~pgG~lv~~~ 160 (233)
T 2gpy_A 118 GEKLELYPLFDVLFIDAAK----GQYRRFFDMYSPMVRPGGLILSDN 160 (233)
T ss_dssp HHHHTTSCCEEEEEEEGGG----SCHHHHHHHHGGGEEEEEEEEEET
T ss_pred HHhcccCCCccEEEECCCH----HHHHHHHHHHHHHcCCCeEEEEEc
Confidence 332 5789999987654 356789999999999999999974
No 177
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=98.90 E-value=6.6e-09 Score=108.28 Aligned_cols=99 Identities=15% Similarity=0.147 Sum_probs=74.8
Q ss_pred CcEEEEeCCCCcHHHHHHhhc--CCEEEEcCcCCchHHHHHHHHHcC---------CCeEEEEeccccCCC--CCCCeeE
Q 006662 219 IRTAIDTGCGVASWGAYLMSR--NILAVSFAPRDTHEAQVQFALERG---------VPALIGVMASIRLPY--PSRAFDM 285 (636)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~--~v~vv~i~p~Dis~a~l~~A~erg---------~~~~~~~~d~~~Lpf--~~~sFDl 285 (636)
+.+|||||||+|.++..+++. ...++.+ |+++.+++.|+++. ..+.+...|....+. ++++||+
T Consensus 96 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~v---Did~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDv 172 (304)
T 3bwc_A 96 PERVLIIGGGDGGVLREVLRHGTVEHCDLV---DIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDV 172 (304)
T ss_dssp CCEEEEEECTTSHHHHHHHTCTTCCEEEEE---ESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEE
T ss_pred CCeEEEEcCCCCHHHHHHHhCCCCCEEEEE---ECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeE
Confidence 459999999999999999987 3355555 88999999887653 357888888766543 4789999
Q ss_pred EEecccccccccCh----HHHHHHHHhcccCCcEEEEEeC
Q 006662 286 AHCSRCLIPWGQYD----GLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 286 V~~s~~L~h~~~d~----~~~L~el~RvLKPGG~Liis~p 321 (636)
|++.... ++.+.. ..+++++.++|||||.+++...
T Consensus 173 Ii~d~~~-~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 211 (304)
T 3bwc_A 173 VIIDTTD-PAGPASKLFGEAFYKDVLRILKPDGICCNQGE 211 (304)
T ss_dssp EEEECC----------CCHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EEECCCC-ccccchhhhHHHHHHHHHHhcCCCcEEEEecC
Confidence 9996654 332222 5889999999999999999864
No 178
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.90 E-value=4.7e-09 Score=103.01 Aligned_cols=94 Identities=17% Similarity=0.158 Sum_probs=72.9
Q ss_pred EEEEeCCCCcHHHHHHhhc---CCEEEEcCcCCchHHHHHHHHHc----CC--CeEEEEeccccC-C-CC----CCCeeE
Q 006662 221 TAIDTGCGVASWGAYLMSR---NILAVSFAPRDTHEAQVQFALER----GV--PALIGVMASIRL-P-YP----SRAFDM 285 (636)
Q Consensus 221 ~VLDIGCGtG~~a~~La~~---~v~vv~i~p~Dis~a~l~~A~er----g~--~~~~~~~d~~~L-p-f~----~~sFDl 285 (636)
+|||||||+|.++..+++. +..++.+ |+++.+++.|+++ +. .+.+..++.... + +. .++||+
T Consensus 67 ~vLdiG~G~G~~~~~la~~~~~~~~v~~v---D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~ 143 (225)
T 3tr6_A 67 KVIDIGTFTGYSAIAMGLALPKDGTLITC---DVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYDL 143 (225)
T ss_dssp EEEEECCTTSHHHHHHHTTCCTTCEEEEE---ESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEEE
T ss_pred EEEEeCCcchHHHHHHHHhCCCCCEEEEE---eCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCccE
Confidence 8999999999999999987 5666677 8899988888654 33 378888776432 2 11 178999
Q ss_pred EEecccccccccChHHHHHHHHhcccCCcEEEEEeC
Q 006662 286 AHCSRCLIPWGQYDGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 286 V~~s~~L~h~~~d~~~~L~el~RvLKPGG~Liis~p 321 (636)
|++... ..+...++.++.++|||||++++...
T Consensus 144 v~~~~~----~~~~~~~l~~~~~~L~pgG~lv~~~~ 175 (225)
T 3tr6_A 144 IYIDAD----KANTDLYYEESLKLLREGGLIAVDNV 175 (225)
T ss_dssp EEECSC----GGGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred EEECCC----HHHHHHHHHHHHHhcCCCcEEEEeCC
Confidence 996542 33457899999999999999999854
No 179
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=98.88 E-value=1.4e-08 Score=99.98 Aligned_cols=94 Identities=6% Similarity=0.009 Sum_probs=70.4
Q ss_pred cEEEEeCCCCcHHHHHHhhc-C--CEEEEcCcCCchHHHHHHHHHc---CCCeEEEEeccccCC---CCCCCeeEEEecc
Q 006662 220 RTAIDTGCGVASWGAYLMSR-N--ILAVSFAPRDTHEAQVQFALER---GVPALIGVMASIRLP---YPSRAFDMAHCSR 290 (636)
Q Consensus 220 r~VLDIGCGtG~~a~~La~~-~--v~vv~i~p~Dis~a~l~~A~er---g~~~~~~~~d~~~Lp---f~~~sFDlV~~s~ 290 (636)
.+|||+|||+|.++..++++ + ..++++ |+++.+++.+.++ ..++.+...|..... ...++||+|++..
T Consensus 75 ~~vLDlG~G~G~~~~~la~~~~~~~~v~~v---D~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~~~ 151 (227)
T 1g8a_A 75 KSVLYLGIASGTTASHVSDIVGWEGKIFGI---EFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIFEDV 151 (227)
T ss_dssp CEEEEETTTSTTHHHHHHHHHCTTSEEEEE---ESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEEEECC
T ss_pred CEEEEEeccCCHHHHHHHHHhCCCeEEEEE---ECCHHHHHHHHHHHhccCCCEEEEccCCCcchhhcccCCceEEEECC
Confidence 49999999999999999976 2 566666 8888877766543 246788888876531 1235899999864
Q ss_pred cccccccCh-HHHHHHHHhcccCCcEEEEEe
Q 006662 291 CLIPWGQYD-GLYLIEVDRVLRPGGYWILSG 320 (636)
Q Consensus 291 ~L~h~~~d~-~~~L~el~RvLKPGG~Liis~ 320 (636)
. ..+. ..++.++.++|||||++++..
T Consensus 152 ~----~~~~~~~~l~~~~~~LkpgG~l~~~~ 178 (227)
T 1g8a_A 152 A----QPTQAKILIDNAEVYLKRGGYGMIAV 178 (227)
T ss_dssp C----STTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred C----CHhHHHHHHHHHHHhcCCCCEEEEEE
Confidence 3 2233 455999999999999999983
No 180
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=98.88 E-value=6.6e-09 Score=102.65 Aligned_cols=104 Identities=18% Similarity=0.181 Sum_probs=77.9
Q ss_pred HHHHHHhhc--cCCCCCcEEEEeCCCCcHHHHHHhhc-C-------CEEEEcCcCCchHHHHHHHHHc----------CC
Q 006662 205 IDDIGKLIN--LKDGSIRTAIDTGCGVASWGAYLMSR-N-------ILAVSFAPRDTHEAQVQFALER----------GV 264 (636)
Q Consensus 205 id~L~~lL~--l~~g~~r~VLDIGCGtG~~a~~La~~-~-------v~vv~i~p~Dis~a~l~~A~er----------g~ 264 (636)
...+.+.+. ..++. +|||||||+|.++..+++. + ..++.+ |+++.+++.|+++ ..
T Consensus 71 ~~~~~~~l~~~~~~~~--~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~v---D~~~~~~~~a~~~~~~~~~~~~~~~ 145 (227)
T 1r18_A 71 HAFALEYLRDHLKPGA--RILDVGSGSGYLTACFYRYIKAKGVDADTRIVGI---EHQAELVRRSKANLNTDDRSMLDSG 145 (227)
T ss_dssp HHHHHHHTTTTCCTTC--EEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEE---ESCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhhCCCCC--EEEEECCCccHHHHHHHHhcccccCCccCEEEEE---EcCHHHHHHHHHHHHhcCccccCCC
Confidence 344555552 33444 9999999999999999885 3 356666 8888888887654 23
Q ss_pred CeEEEEeccccCCCCC-CCeeEEEecccccccccChHHHHHHHHhcccCCcEEEEEeC
Q 006662 265 PALIGVMASIRLPYPS-RAFDMAHCSRCLIPWGQYDGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 265 ~~~~~~~d~~~Lpf~~-~sFDlV~~s~~L~h~~~d~~~~L~el~RvLKPGG~Liis~p 321 (636)
++.+...|... ++++ ++||+|++...+.+.. .++.++|||||++++...
T Consensus 146 ~v~~~~~d~~~-~~~~~~~fD~I~~~~~~~~~~-------~~~~~~LkpgG~lvi~~~ 195 (227)
T 1r18_A 146 QLLIVEGDGRK-GYPPNAPYNAIHVGAAAPDTP-------TELINQLASGGRLIVPVG 195 (227)
T ss_dssp SEEEEESCGGG-CCGGGCSEEEEEECSCBSSCC-------HHHHHTEEEEEEEEEEES
T ss_pred ceEEEECCccc-CCCcCCCccEEEECCchHHHH-------HHHHHHhcCCCEEEEEEe
Confidence 57788887765 5554 7899999998885543 789999999999999865
No 181
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.87 E-value=4e-08 Score=104.32 Aligned_cols=145 Identities=15% Similarity=0.107 Sum_probs=96.9
Q ss_pred HHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhc--CCEEEEcCcCCchHHHHHHHHHcC-----CCeEEEEeccccCCC
Q 006662 206 DDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR--NILAVSFAPRDTHEAQVQFALERG-----VPALIGVMASIRLPY 278 (636)
Q Consensus 206 d~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~--~v~vv~i~p~Dis~a~l~~A~erg-----~~~~~~~~d~~~Lpf 278 (636)
..+.+.++.... .+|||||||+|.++..++++ +..++.+ |. +.+++.|+++. ..+.+..+|....|.
T Consensus 169 ~~~~~~~~~~~~--~~v~DvGgG~G~~~~~l~~~~p~~~~~~~---dl-p~v~~~a~~~~~~~~~~rv~~~~gD~~~~~~ 242 (353)
T 4a6d_A 169 RSVLTAFDLSVF--PLMCDLGGGAGALAKECMSLYPGCKITVF---DI-PEVVWTAKQHFSFQEEEQIDFQEGDFFKDPL 242 (353)
T ss_dssp HHHHHSSCGGGC--SEEEEETCTTSHHHHHHHHHCSSCEEEEE---EC-HHHHHHHHHHSCC--CCSEEEEESCTTTSCC
T ss_pred HHHHHhcCcccC--CeEEeeCCCCCHHHHHHHHhCCCceeEec---cC-HHHHHHHHHhhhhcccCceeeecCccccCCC
Confidence 344444444443 48999999999999999998 4555555 55 46677776542 357888888776655
Q ss_pred CCCCeeEEEecccccccccCh-HHHHHHHHhcccCCcEEEEEeCCCCccccccCCCCchhhhH---------HHHHHHHH
Q 006662 279 PSRAFDMAHCSRCLIPWGQYD-GLYLIEVDRVLRPGGYWILSGPPVNWESHWKGWNRTTEDLK---------SEQNGIET 348 (636)
Q Consensus 279 ~~~sFDlV~~s~~L~h~~~d~-~~~L~el~RvLKPGG~Liis~p~~~w~~~~~~W~~t~e~l~---------~~~~~ie~ 348 (636)
+ .+|+|++..+||+|.++. ..+|+++.+.|+|||.++|...-..-. ...++....-++. ...+++++
T Consensus 243 ~--~~D~~~~~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~~~-~~~~~~~~~~dl~ml~~~~g~ert~~e~~~ 319 (353)
T 4a6d_A 243 P--EADLYILARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLLDED-RRGPLLTQLYSLNMLVQTEGQERTPTHYHM 319 (353)
T ss_dssp C--CCSEEEEESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEECCCCTT-SCCCHHHHHHHHHHHHSSSCCCCCHHHHHH
T ss_pred C--CceEEEeeeecccCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeCCC-CCCCHHHHHHHHHHHHhCCCcCCCHHHHHH
Confidence 5 479999999998887444 678999999999999999986422100 0000000001111 12456778
Q ss_pred HHHHhceEeec
Q 006662 349 IARSLCWKKLI 359 (636)
Q Consensus 349 la~~l~Wk~v~ 359 (636)
+++..+|+.+.
T Consensus 320 ll~~AGf~~v~ 330 (353)
T 4a6d_A 320 LLSSAGFRDFQ 330 (353)
T ss_dssp HHHHHTCEEEE
T ss_pred HHHHCCCceEE
Confidence 88899998654
No 182
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.86 E-value=5e-09 Score=110.81 Aligned_cols=93 Identities=13% Similarity=0.110 Sum_probs=76.5
Q ss_pred cEEEEeCCCCcHHHHHHhhc--CCEEEEcCcCCchHHHHHHHHHcCCCeEEEEeccccCCCCCCCeeEEEeccccccccc
Q 006662 220 RTAIDTGCGVASWGAYLMSR--NILAVSFAPRDTHEAQVQFALERGVPALIGVMASIRLPYPSRAFDMAHCSRCLIPWGQ 297 (636)
Q Consensus 220 r~VLDIGCGtG~~a~~La~~--~v~vv~i~p~Dis~a~l~~A~erg~~~~~~~~d~~~Lpf~~~sFDlV~~s~~L~h~~~ 297 (636)
.+|||||||+|.++..++++ +..++.+ |+ +.+++.|++. ..+.+..+|... +++. ||+|++..++++|.
T Consensus 190 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~---D~-~~~~~~a~~~-~~v~~~~~d~~~-~~p~--~D~v~~~~~lh~~~- 260 (352)
T 1fp2_A 190 ESIVDVGGGTGTTAKIICETFPKLKCIVF---DR-PQVVENLSGS-NNLTYVGGDMFT-SIPN--ADAVLLKYILHNWT- 260 (352)
T ss_dssp SEEEEETCTTSHHHHHHHHHCTTCEEEEE---EC-HHHHTTCCCB-TTEEEEECCTTT-CCCC--CSEEEEESCGGGSC-
T ss_pred ceEEEeCCCccHHHHHHHHHCCCCeEEEe---eC-HHHHhhcccC-CCcEEEeccccC-CCCC--ccEEEeehhhccCC-
Confidence 49999999999999999987 5566666 88 7888777553 348888888755 6653 99999999998885
Q ss_pred ChH--HHHHHHHhcccC---CcEEEEEeC
Q 006662 298 YDG--LYLIEVDRVLRP---GGYWILSGP 321 (636)
Q Consensus 298 d~~--~~L~el~RvLKP---GG~Liis~p 321 (636)
++. .+|+++.++||| ||++++..+
T Consensus 261 d~~~~~~l~~~~~~L~p~~~gG~l~i~e~ 289 (352)
T 1fp2_A 261 DKDCLRILKKCKEAVTNDGKRGKVTIIDM 289 (352)
T ss_dssp HHHHHHHHHHHHHHHSGGGCCCEEEEEEC
T ss_pred HHHHHHHHHHHHHhCCCCCCCcEEEEEEe
Confidence 554 899999999999 999999864
No 183
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=98.86 E-value=5.1e-09 Score=116.06 Aligned_cols=111 Identities=12% Similarity=0.070 Sum_probs=81.9
Q ss_pred HHHHHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhcC-CEEEEcCcCCchHHHHHHHHHc----CC--CeEEEEeccc
Q 006662 202 DAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRN-ILAVSFAPRDTHEAQVQFALER----GV--PALIGVMASI 274 (636)
Q Consensus 202 ~~~id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~~-v~vv~i~p~Dis~a~l~~A~er----g~--~~~~~~~d~~ 274 (636)
+.+.+.+.+.+...++. +|||||||+|.++..+++.+ ..++++ |+++ +++.|+++ +. .+.+..++..
T Consensus 144 ~~~~~~il~~l~~~~~~--~VLDiGcGtG~la~~la~~~~~~V~gv---D~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~ 217 (480)
T 3b3j_A 144 GTYQRAILQNHTDFKDK--IVLDVGCGSGILSFFAAQAGARKIYAV---EAST-MAQHAEVLVKSNNLTDRIVVIPGKVE 217 (480)
T ss_dssp HHHHHHHHHTGGGTTTC--EEEEESCSTTHHHHHHHHTTCSEEEEE---ECHH-HHHHHHHHHHHTTCTTTEEEEESCTT
T ss_pred HHHHHHHHHhhhhcCCC--EEEEecCcccHHHHHHHHcCCCEEEEE---EcHH-HHHHHHHHHHHcCCCCcEEEEECchh
Confidence 34455565555444444 99999999999999999875 366666 7787 77666543 43 5888888888
Q ss_pred cCCCCCCCeeEEEecccccccccC-hHHHHHHHHhcccCCcEEEEE
Q 006662 275 RLPYPSRAFDMAHCSRCLIPWGQY-DGLYLIEVDRVLRPGGYWILS 319 (636)
Q Consensus 275 ~Lpf~~~sFDlV~~s~~L~h~~~d-~~~~L~el~RvLKPGG~Liis 319 (636)
.++++ ++||+|+++..++++..+ ....+.++.++|||||++++.
T Consensus 218 ~~~~~-~~fD~Ivs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~~ 262 (480)
T 3b3j_A 218 EVSLP-EQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPT 262 (480)
T ss_dssp TCCCS-SCEEEEECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEESC
T ss_pred hCccC-CCeEEEEEeCchHhcCcHHHHHHHHHHHHhcCCCCEEEEE
Confidence 87765 589999998776565422 256777899999999999864
No 184
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=98.85 E-value=2.7e-08 Score=96.06 Aligned_cols=92 Identities=11% Similarity=-0.046 Sum_probs=70.3
Q ss_pred CcEEEEeCCCCcHHHHHHhhcCC-EEEEcCcCCchHHHHHHHHHcCCCeEEEEeccccCCCCCCCeeEEEeccccccccc
Q 006662 219 IRTAIDTGCGVASWGAYLMSRNI-LAVSFAPRDTHEAQVQFALERGVPALIGVMASIRLPYPSRAFDMAHCSRCLIPWGQ 297 (636)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~~v-~vv~i~p~Dis~a~l~~A~erg~~~~~~~~d~~~Lpf~~~sFDlV~~s~~L~h~~~ 297 (636)
..+|||+|||+|.++..+++.+. .++++ |+++.+++.|+++..++.+..+|...++ ++||+|+++..++++..
T Consensus 52 ~~~vlD~gcG~G~~~~~l~~~~~~~v~~v---D~~~~~~~~a~~~~~~~~~~~~d~~~~~---~~~D~v~~~~p~~~~~~ 125 (200)
T 1ne2_A 52 GRSVIDAGTGNGILACGSYLLGAESVTAF---DIDPDAIETAKRNCGGVNFMVADVSEIS---GKYDTWIMNPPFGSVVK 125 (200)
T ss_dssp TSEEEEETCTTCHHHHHHHHTTBSEEEEE---ESCHHHHHHHHHHCTTSEEEECCGGGCC---CCEEEEEECCCC-----
T ss_pred CCEEEEEeCCccHHHHHHHHcCCCEEEEE---ECCHHHHHHHHHhcCCCEEEECcHHHCC---CCeeEEEECCCchhccC
Confidence 34899999999999999998854 46666 8899999999887657788888888765 68999999998866643
Q ss_pred Ch-HHHHHHHHhcccCCcEEEEE
Q 006662 298 YD-GLYLIEVDRVLRPGGYWILS 319 (636)
Q Consensus 298 d~-~~~L~el~RvLKPGG~Liis 319 (636)
.. ..++.++.++| |+ +++.
T Consensus 126 ~~~~~~l~~~~~~~--g~-~~~~ 145 (200)
T 1ne2_A 126 HSDRAFIDKAFETS--MW-IYSI 145 (200)
T ss_dssp --CHHHHHHHHHHE--EE-EEEE
T ss_pred chhHHHHHHHHHhc--Cc-EEEE
Confidence 22 57899999998 55 4444
No 185
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=98.85 E-value=2.4e-08 Score=97.98 Aligned_cols=105 Identities=13% Similarity=0.136 Sum_probs=76.8
Q ss_pred HHHhhccCCCCCcEEEEeCCCCcHHHHHHhhc---CCEEEEcCcCCchHHHHHHHHHc----CC--CeEEEEeccccC-C
Q 006662 208 IGKLINLKDGSIRTAIDTGCGVASWGAYLMSR---NILAVSFAPRDTHEAQVQFALER----GV--PALIGVMASIRL-P 277 (636)
Q Consensus 208 L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~---~v~vv~i~p~Dis~a~l~~A~er----g~--~~~~~~~d~~~L-p 277 (636)
+..++...++. +|||||||+|.++..+++. +..++++ |+++.+++.|+++ +. .+.+..+|.... +
T Consensus 50 l~~l~~~~~~~--~vLdiG~G~G~~~~~la~~~~~~~~v~~v---D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 124 (223)
T 3duw_A 50 LQLLVQIQGAR--NILEIGTLGGYSTIWLARGLSSGGRVVTL---EASEKHADIARSNIERANLNDRVEVRTGLALDSLQ 124 (223)
T ss_dssp HHHHHHHHTCS--EEEEECCTTSHHHHHHHTTCCSSCEEEEE---ESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHH
T ss_pred HHHHHHhhCCC--EEEEecCCccHHHHHHHHhCCCCCEEEEE---ECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHH
Confidence 33333334444 8999999999999999987 5666677 8888888887654 33 378888876442 1
Q ss_pred -CC---CCCeeEEEecccccccccChHHHHHHHHhcccCCcEEEEEeC
Q 006662 278 -YP---SRAFDMAHCSRCLIPWGQYDGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 278 -f~---~~sFDlV~~s~~L~h~~~d~~~~L~el~RvLKPGG~Liis~p 321 (636)
++ .++||+|++.... .....++.++.++|||||++++...
T Consensus 125 ~~~~~~~~~fD~v~~d~~~----~~~~~~l~~~~~~L~pgG~lv~~~~ 168 (223)
T 3duw_A 125 QIENEKYEPFDFIFIDADK----QNNPAYFEWALKLSRPGTVIIGDNV 168 (223)
T ss_dssp HHHHTTCCCCSEEEECSCG----GGHHHHHHHHHHTCCTTCEEEEESC
T ss_pred HHHhcCCCCcCEEEEcCCc----HHHHHHHHHHHHhcCCCcEEEEeCC
Confidence 11 2679999986542 2446899999999999999998754
No 186
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=98.85 E-value=6.1e-09 Score=109.41 Aligned_cols=106 Identities=16% Similarity=0.137 Sum_probs=77.6
Q ss_pred HHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhc-C--CEEEEcCcCCchHHHHHHHHHcC----------------CC
Q 006662 205 IDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR-N--ILAVSFAPRDTHEAQVQFALERG----------------VP 265 (636)
Q Consensus 205 id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~-~--v~vv~i~p~Dis~a~l~~A~erg----------------~~ 265 (636)
...+.+.+...++. +|||+|||+|.++..+++. + ..++++ |+++.+++.|+++. .+
T Consensus 94 ~~~~l~~l~~~~g~--~VLDiG~G~G~~~~~la~~~g~~~~v~~v---D~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~ 168 (336)
T 2b25_A 94 INMILSMMDINPGD--TVLEAGSGSGGMSLFLSKAVGSQGRVISF---EVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDN 168 (336)
T ss_dssp HHHHHHHHTCCTTC--EEEEECCTTSHHHHHHHHHHCTTCEEEEE---ESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCC
T ss_pred HHHHHHhcCCCCCC--EEEEeCCCcCHHHHHHHHHhCCCceEEEE---eCCHHHHHHHHHHHHHhhcccccccccccCCc
Confidence 34555566555555 9999999999999999986 4 566677 88988888887541 35
Q ss_pred eEEEEeccccC--CCCCCCeeEEEecccccccccChHHHHHHHHhcccCCcEEEEEeC
Q 006662 266 ALIGVMASIRL--PYPSRAFDMAHCSRCLIPWGQYDGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 266 ~~~~~~d~~~L--pf~~~sFDlV~~s~~L~h~~~d~~~~L~el~RvLKPGG~Liis~p 321 (636)
+.+...|.... ++++++||+|++... ++..++.++.++|||||.|++..+
T Consensus 169 v~~~~~d~~~~~~~~~~~~fD~V~~~~~------~~~~~l~~~~~~LkpgG~lv~~~~ 220 (336)
T 2b25_A 169 VDFIHKDISGATEDIKSLTFDAVALDML------NPHVTLPVFYPHLKHGGVCAVYVV 220 (336)
T ss_dssp EEEEESCTTCCC-------EEEEEECSS------STTTTHHHHGGGEEEEEEEEEEES
T ss_pred eEEEECChHHcccccCCCCeeEEEECCC------CHHHHHHHHHHhcCCCcEEEEEeC
Confidence 78888888776 466778999998532 333489999999999999998865
No 187
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=98.85 E-value=6e-09 Score=101.56 Aligned_cols=93 Identities=14% Similarity=0.118 Sum_probs=72.9
Q ss_pred cEEEEeCCCCcHHHHHHhhc---CCEEEEcCcCCchHHHHHHHHHc----CC--CeEEEEeccccC-CCCCCCeeEEEec
Q 006662 220 RTAIDTGCGVASWGAYLMSR---NILAVSFAPRDTHEAQVQFALER----GV--PALIGVMASIRL-PYPSRAFDMAHCS 289 (636)
Q Consensus 220 r~VLDIGCGtG~~a~~La~~---~v~vv~i~p~Dis~a~l~~A~er----g~--~~~~~~~d~~~L-pf~~~sFDlV~~s 289 (636)
.+|||||||+|..+..+++. +..++.+ |+++.+++.|+++ +. .+.+..++.... +..++ ||+|++.
T Consensus 58 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~v---D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~~ 133 (210)
T 3c3p_A 58 QLVVVPGDGLGCASWWFARAISISSRVVMI---DPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRD-IDILFMD 133 (210)
T ss_dssp SEEEEESCGGGHHHHHHHTTSCTTCEEEEE---ESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCS-EEEEEEE
T ss_pred CEEEEEcCCccHHHHHHHHhCCCCCEEEEE---ECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCC-CCEEEEc
Confidence 38999999999999999987 4566666 8899998888754 32 377887777543 54456 9999986
Q ss_pred ccccccccChHHHHHHHHhcccCCcEEEEEe
Q 006662 290 RCLIPWGQYDGLYLIEVDRVLRPGGYWILSG 320 (636)
Q Consensus 290 ~~L~h~~~d~~~~L~el~RvLKPGG~Liis~ 320 (636)
.. ..+...++.++.++|||||++++..
T Consensus 134 ~~----~~~~~~~l~~~~~~LkpgG~lv~~~ 160 (210)
T 3c3p_A 134 CD----VFNGADVLERMNRCLAKNALLIAVN 160 (210)
T ss_dssp TT----TSCHHHHHHHHGGGEEEEEEEEEES
T ss_pred CC----hhhhHHHHHHHHHhcCCCeEEEEEC
Confidence 32 2355789999999999999999874
No 188
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=98.84 E-value=7e-09 Score=109.93 Aligned_cols=113 Identities=17% Similarity=0.015 Sum_probs=85.5
Q ss_pred HHHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhcC---CEEEEcCcCCchHHHHHHHHHc----CC-CeEEEEecccc
Q 006662 204 YIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRN---ILAVSFAPRDTHEAQVQFALER----GV-PALIGVMASIR 275 (636)
Q Consensus 204 ~id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~~---v~vv~i~p~Dis~a~l~~A~er----g~-~~~~~~~d~~~ 275 (636)
....+..++...++. +|||+|||+|.++..++... ..++++ |+++.+++.|+++ +. .+.+.+.|...
T Consensus 191 la~~l~~~~~~~~~~--~vLD~gcGsG~~~ie~a~~~~~~~~v~g~---Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~ 265 (354)
T 3tma_A 191 LAQALLRLADARPGM--RVLDPFTGSGTIALEAASTLGPTSPVYAG---DLDEKRLGLAREAALASGLSWIRFLRADARH 265 (354)
T ss_dssp HHHHHHHHTTCCTTC--CEEESSCTTSHHHHHHHHHHCTTSCEEEE---ESCHHHHHHHHHHHHHTTCTTCEEEECCGGG
T ss_pred HHHHHHHHhCCCCCC--EEEeCCCCcCHHHHHHHHhhCCCceEEEE---ECCHHHHHHHHHHHHHcCCCceEEEeCChhh
Confidence 444555555555444 89999999999999999864 566666 8888998888754 43 58899999999
Q ss_pred CCCCCCCeeEEEecccccccccC-------hHHHHHHHHhcccCCcEEEEEeC
Q 006662 276 LPYPSRAFDMAHCSRCLIPWGQY-------DGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 276 Lpf~~~sFDlV~~s~~L~h~~~d-------~~~~L~el~RvLKPGG~Liis~p 321 (636)
++.+.+.||+|+++..+.....+ ...++.++.++|||||.+++..+
T Consensus 266 ~~~~~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~ 318 (354)
T 3tma_A 266 LPRFFPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTL 318 (354)
T ss_dssp GGGTCCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEES
T ss_pred CccccCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 88877889999997654221111 15788999999999999999976
No 189
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=98.83 E-value=2e-08 Score=105.20 Aligned_cols=110 Identities=18% Similarity=0.147 Sum_probs=80.1
Q ss_pred HHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhc---CCEEEEcCcCCchHHHHHHHHHc----CC-CeEEEEeccccCCC
Q 006662 207 DIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR---NILAVSFAPRDTHEAQVQFALER----GV-PALIGVMASIRLPY 278 (636)
Q Consensus 207 ~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~---~v~vv~i~p~Dis~a~l~~A~er----g~-~~~~~~~d~~~Lpf 278 (636)
.+..++...++. +|||+|||+|..+..+++. +..++++ |+++.+++.++++ +. ++.+...|...++.
T Consensus 109 l~~~~l~~~~g~--~VLDlg~G~G~~t~~la~~~~~~~~v~av---D~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~ 183 (315)
T 1ixk_A 109 YPPVALDPKPGE--IVADMAAAPGGKTSYLAQLMRNDGVIYAF---DVDENRLRETRLNLSRLGVLNVILFHSSSLHIGE 183 (315)
T ss_dssp HHHHHHCCCTTC--EEEECCSSCSHHHHHHHHHTTTCSEEEEE---CSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGG
T ss_pred HHHHHhCCCCCC--EEEEeCCCCCHHHHHHHHHhCCCCEEEEE---cCCHHHHHHHHHHHHHhCCCeEEEEECChhhccc
Confidence 344555555555 9999999999999999975 2556666 8899988887654 44 57888888877765
Q ss_pred CCCCeeEEEecc------cccccc-------cC--------hHHHHHHHHhcccCCcEEEEEeC
Q 006662 279 PSRAFDMAHCSR------CLIPWG-------QY--------DGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 279 ~~~sFDlV~~s~------~L~h~~-------~d--------~~~~L~el~RvLKPGG~Liis~p 321 (636)
.+++||+|++.. ++.+.. .+ ...+|.++.++|||||++++++.
T Consensus 184 ~~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stc 247 (315)
T 1ixk_A 184 LNVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTC 247 (315)
T ss_dssp GCCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred ccccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeC
Confidence 567899999732 221111 00 14789999999999999999865
No 190
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=98.83 E-value=1.3e-08 Score=102.10 Aligned_cols=98 Identities=18% Similarity=0.183 Sum_probs=74.0
Q ss_pred cEEEEeCCCCcHHHHHHhhcC--CEEEEcCcCCchHHHHHHHHHc------------C-CCeEEEEecccc-CC--CCCC
Q 006662 220 RTAIDTGCGVASWGAYLMSRN--ILAVSFAPRDTHEAQVQFALER------------G-VPALIGVMASIR-LP--YPSR 281 (636)
Q Consensus 220 r~VLDIGCGtG~~a~~La~~~--v~vv~i~p~Dis~a~l~~A~er------------g-~~~~~~~~d~~~-Lp--f~~~ 281 (636)
.+|||||||+|.++..+++.+ ..++++ |+++.+++.++++ + .++.+..+|... ++ ++.+
T Consensus 51 ~~vLDiGcG~G~~~~~la~~~~~~~v~gv---D~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~ 127 (246)
T 2vdv_E 51 VTIADIGCGFGGLMIDLSPAFPEDLILGM---EIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKG 127 (246)
T ss_dssp EEEEEETCTTSHHHHHHHHHSTTSEEEEE---ESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTT
T ss_pred CEEEEEcCCCCHHHHHHHHhCCCCCEEEE---EcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhcccc
Confidence 489999999999999999874 456666 8888888877542 3 368888888775 66 7788
Q ss_pred CeeEEEecccccccccCh--------HHHHHHHHhcccCCcEEEEEeC
Q 006662 282 AFDMAHCSRCLIPWGQYD--------GLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 282 sFDlV~~s~~L~h~~~d~--------~~~L~el~RvLKPGG~Liis~p 321 (636)
+||.|+....- .|.... ..++.++.++|+|||+|++...
T Consensus 128 ~~d~v~~~~p~-p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~td 174 (246)
T 2vdv_E 128 QLSKMFFCFPD-PHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTITD 174 (246)
T ss_dssp CEEEEEEESCC-CC------CSSCCCHHHHHHHHHHEEEEEEEEEEES
T ss_pred ccCEEEEECCC-cccccchhHHhhccHHHHHHHHHHcCCCCEEEEEec
Confidence 99999864321 221100 4799999999999999999753
No 191
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.82 E-value=2e-09 Score=121.68 Aligned_cols=99 Identities=13% Similarity=0.044 Sum_probs=80.2
Q ss_pred CCcEEEEeCCCCcHHHHHHhhcCCEEEEcCcCCchHHHHHHHHH----cC-CCeEEEEeccccC--CCCCCCeeEEEecc
Q 006662 218 SIRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALE----RG-VPALIGVMASIRL--PYPSRAFDMAHCSR 290 (636)
Q Consensus 218 ~~r~VLDIGCGtG~~a~~La~~~v~vv~i~p~Dis~a~l~~A~e----rg-~~~~~~~~d~~~L--pf~~~sFDlV~~s~ 290 (636)
.+.+|||||||.|.++..|+++|..++++ |.++.+++.|+. .+ .++.+.+.+++.+ ++++++||+|+|..
T Consensus 66 ~~~~vLDvGCG~G~~~~~la~~ga~V~gi---D~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~e 142 (569)
T 4azs_A 66 RPLNVLDLGCAQGFFSLSLASKGATIVGI---DFQQENINVCRALAEENPDFAAEFRVGRIEEVIAALEEGEFDLAIGLS 142 (569)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTCEEEEE---ESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHHCCTTSCSEEEEES
T ss_pred CCCeEEEECCCCcHHHHHHHhCCCEEEEE---CCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhhccCCCccEEEECc
Confidence 34589999999999999999999999888 999999988763 34 5688999988877 46788999999999
Q ss_pred cccccccChH--HHHHHHHhcccCCcEEEEEe
Q 006662 291 CLIPWGQYDG--LYLIEVDRVLRPGGYWILSG 320 (636)
Q Consensus 291 ~L~h~~~d~~--~~L~el~RvLKPGG~Liis~ 320 (636)
+++|.. ++. ..+..+.+.|+++|..++..
T Consensus 143 ~~ehv~-~~~~~~~~~~~~~tl~~~~~~~~~~ 173 (569)
T 4azs_A 143 VFHHIV-HLHGIDEVKRLLSRLADVTQAVILE 173 (569)
T ss_dssp CHHHHH-HHHCHHHHHHHHHHHHHHSSEEEEE
T ss_pred chhcCC-CHHHHHHHHHHHHHhccccceeeEE
Confidence 998875 453 34556777888888766653
No 192
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=98.81 E-value=6.4e-08 Score=96.37 Aligned_cols=105 Identities=15% Similarity=0.190 Sum_probs=77.0
Q ss_pred HHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhc---CCEEEEcCcCCchHHHHHHHHHc----CC--CeEEEEecccc-C
Q 006662 207 DIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR---NILAVSFAPRDTHEAQVQFALER----GV--PALIGVMASIR-L 276 (636)
Q Consensus 207 ~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~---~v~vv~i~p~Dis~a~l~~A~er----g~--~~~~~~~d~~~-L 276 (636)
.+..++...++. +|||||||+|.++..+++. +..++.+ |+++.+++.|+++ +. .+.+..+|... +
T Consensus 51 ~l~~l~~~~~~~--~VLdiG~G~G~~~~~la~~~~~~~~v~~v---D~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~ 125 (239)
T 2hnk_A 51 FLNILTKISGAK--RIIEIGTFTGYSSLCFASALPEDGKILCC---DVSEEWTNVARKYWKENGLENKIFLKLGSALETL 125 (239)
T ss_dssp HHHHHHHHHTCS--EEEEECCTTCHHHHHHHHHSCTTCEEEEE---ESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHH
T ss_pred HHHHHHHhhCcC--EEEEEeCCCCHHHHHHHHhCCCCCEEEEE---ECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHH
Confidence 344444444444 8999999999999999987 4566666 8888888888755 33 26777776543 1
Q ss_pred C--------------CCC--CCeeEEEecccccccccChHHHHHHHHhcccCCcEEEEEe
Q 006662 277 P--------------YPS--RAFDMAHCSRCLIPWGQYDGLYLIEVDRVLRPGGYWILSG 320 (636)
Q Consensus 277 p--------------f~~--~sFDlV~~s~~L~h~~~d~~~~L~el~RvLKPGG~Liis~ 320 (636)
+ |++ ++||+|++.... .+...++.++.++|||||++++..
T Consensus 126 ~~~~~~~~~~~~~~~f~~~~~~fD~I~~~~~~----~~~~~~l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 126 QVLIDSKSAPSWASDFAFGPSSIDLFFLDADK----ENYPNYYPLILKLLKPGGLLIADN 181 (239)
T ss_dssp HHHHHCSSCCGGGTTTCCSTTCEEEEEECSCG----GGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred HHHHhhcccccccccccCCCCCcCEEEEeCCH----HHHHHHHHHHHHHcCCCeEEEEEc
Confidence 2 333 789999987543 234689999999999999999974
No 193
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=98.81 E-value=2.3e-08 Score=100.64 Aligned_cols=106 Identities=12% Similarity=0.017 Sum_probs=72.5
Q ss_pred HHHHHhhc---cCCCCCcEEEEeCCCCcHHHHHHhhc---CCEEEEcCcCCchHHHH----HHHHHcCCCeEEEEecccc
Q 006662 206 DDIGKLIN---LKDGSIRTAIDTGCGVASWGAYLMSR---NILAVSFAPRDTHEAQV----QFALERGVPALIGVMASIR 275 (636)
Q Consensus 206 d~L~~lL~---l~~g~~r~VLDIGCGtG~~a~~La~~---~v~vv~i~p~Dis~a~l----~~A~erg~~~~~~~~d~~~ 275 (636)
..+...+. +.++. +|||+|||+|.++..+++. .-.++++ |+++.++ +.++++ .++.+..+|...
T Consensus 63 ~~ll~~l~~~~l~~g~--~VLDlG~GtG~~t~~la~~v~~~G~V~av---D~s~~~l~~l~~~a~~r-~nv~~i~~Da~~ 136 (232)
T 3id6_C 63 GAILKGLKTNPIRKGT--KVLYLGAASGTTISHVSDIIELNGKAYGV---EFSPRVVRELLLVAQRR-PNIFPLLADARF 136 (232)
T ss_dssp HHHHTTCSCCSCCTTC--EEEEETCTTSHHHHHHHHHHTTTSEEEEE---ECCHHHHHHHHHHHHHC-TTEEEEECCTTC
T ss_pred HHHHhhhhhcCCCCCC--EEEEEeecCCHHHHHHHHHhCCCCEEEEE---ECcHHHHHHHHHHhhhc-CCeEEEEccccc
Confidence 34444443 44555 9999999999999999876 2355555 7777664 444444 467888888754
Q ss_pred CC---CCCCCeeEEEecccccccccChH-HHHHHHHhcccCCcEEEEEeC
Q 006662 276 LP---YPSRAFDMAHCSRCLIPWGQYDG-LYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 276 Lp---f~~~sFDlV~~s~~L~h~~~d~~-~~L~el~RvLKPGG~Liis~p 321 (636)
.. ...++||+|++.... ++.. .++..+.++|||||+|+++..
T Consensus 137 ~~~~~~~~~~~D~I~~d~a~----~~~~~il~~~~~~~LkpGG~lvisik 182 (232)
T 3id6_C 137 PQSYKSVVENVDVLYVDIAQ----PDQTDIAIYNAKFFLKVNGDMLLVIK 182 (232)
T ss_dssp GGGTTTTCCCEEEEEECCCC----TTHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred chhhhccccceEEEEecCCC----hhHHHHHHHHHHHhCCCCeEEEEEEc
Confidence 32 124689999997543 3443 445566779999999999854
No 194
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=98.81 E-value=1.5e-08 Score=107.04 Aligned_cols=114 Identities=9% Similarity=0.003 Sum_probs=81.0
Q ss_pred HHHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhcCCEEEEcCcCCchHHHHHHHHHc----CC---CeEEEEeccccC
Q 006662 204 YIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALER----GV---PALIGVMASIRL 276 (636)
Q Consensus 204 ~id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~~v~vv~i~p~Dis~a~l~~A~er----g~---~~~~~~~d~~~L 276 (636)
..+.+.+.+.. .+...+|||+|||+|.++..+++.+..++++ |+++.+++.|+++ +. .+.+...|...+
T Consensus 140 ~~~~l~~~~~~-~~~~~~VLDlgcGtG~~sl~la~~ga~V~~V---D~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~ 215 (332)
T 2igt_A 140 HWEWLKNAVET-ADRPLKVLNLFGYTGVASLVAAAAGAEVTHV---DASKKAIGWAKENQVLAGLEQAPIRWICEDAMKF 215 (332)
T ss_dssp HHHHHHHHHHH-SSSCCEEEEETCTTCHHHHHHHHTTCEEEEE---CSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHH
T ss_pred HHHHHHHHHHh-cCCCCcEEEcccccCHHHHHHHHcCCEEEEE---ECCHHHHHHHHHHHHHcCCCccceEEEECcHHHH
Confidence 33445555531 1223489999999999999999988777777 9999999988754 33 277888876554
Q ss_pred CC----CCCCeeEEEecccc---------cccccChHHHHHHHHhcccCCcEEEEEeC
Q 006662 277 PY----PSRAFDMAHCSRCL---------IPWGQYDGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 277 pf----~~~sFDlV~~s~~L---------~h~~~d~~~~L~el~RvLKPGG~Liis~p 321 (636)
.. ..++||+|++.... .++..+...++.++.++|+|||+|++...
T Consensus 216 l~~~~~~~~~fD~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~ 273 (332)
T 2igt_A 216 IQREERRGSTYDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTA 273 (332)
T ss_dssp HHHHHHHTCCBSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEE
T ss_pred HHHHHhcCCCceEEEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEEC
Confidence 21 15689999995431 11222346889999999999999888753
No 195
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=98.80 E-value=4e-09 Score=102.88 Aligned_cols=133 Identities=14% Similarity=0.205 Sum_probs=93.1
Q ss_pred CcceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhhcc--cchhhccccccCC--CCCccceeeecccccc
Q 006662 476 RYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERGL--IGTYQNWCEAMST--YPRTYDLIHADSIFSL 551 (636)
Q Consensus 476 ~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRgl--i~~~~~~ce~~~~--yp~t~Dl~H~~~~fs~ 551 (636)
...+|||+|||.|.++.+|++.+. +|+.+|.++.++..+.++-- +..+. ..+.. ++.+||+|.+.++|..
T Consensus 45 ~~~~vLDiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~---~d~~~~~~~~~fD~v~~~~~l~~ 118 (220)
T 3hnr_A 45 SFGNVLEFGVGTGNLTNKLLLAGR---TVYGIEPSREMRMIAKEKLPKEFSITE---GDFLSFEVPTSIDTIVSTYAFHH 118 (220)
T ss_dssp CCSEEEEECCTTSHHHHHHHHTTC---EEEEECSCHHHHHHHHHHSCTTCCEES---CCSSSCCCCSCCSEEEEESCGGG
T ss_pred CCCeEEEeCCCCCHHHHHHHhCCC---eEEEEeCCHHHHHHHHHhCCCceEEEe---CChhhcCCCCCeEEEEECcchhc
Confidence 467999999999999999998854 67777887788888888732 22222 22222 3389999999888875
Q ss_pred CCCCcCHHHHHHHHhhcccCCcEEEEEeCH----H---------------------------HHHHHHHHHhcCCCceEE
Q 006662 552 YKDRCEMEDVLLEMDRILRPEGSVIIRDDV----D---------------------------ILVKIKSITDGMEWEGRI 600 (636)
Q Consensus 552 ~~~~c~~~~~l~e~dRiLrPgG~~i~~d~~----~---------------------------~~~~~~~~~~~~~W~~~~ 600 (636)
..+. ....+|.|+-|+|||||.+++.+.. . ....++++++.-.+++..
T Consensus 119 ~~~~-~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v~~ 197 (220)
T 3hnr_A 119 LTDD-EKNVAIAKYSQLLNKGGKIVFADTIFADQDAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQTIFENNGFHVTF 197 (220)
T ss_dssp SCHH-HHHHHHHHHHHHSCTTCEEEEEEECBSSHHHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHHHHHHTTEEEEE
T ss_pred CChH-HHHHHHHHHHHhcCCCCEEEEEeccccChHHHHHHHHHHHhCCCccchhhcchhhcCCHHHHHHHHHHCCCEEEE
Confidence 5432 1234999999999999999998521 1 125677778888887665
Q ss_pred eccCCCCCCcceEEEEEec
Q 006662 601 ADHENGPRQREKILFANKK 619 (636)
Q Consensus 601 ~~~e~~~~~~~~~l~~~K~ 619 (636)
.... .-.-++.++|+
T Consensus 198 ~~~~----~~~w~~~~~~~ 212 (220)
T 3hnr_A 198 TRLN----HFVWVMEATKQ 212 (220)
T ss_dssp EECS----SSEEEEEEEEC
T ss_pred eecc----ceEEEEeehhh
Confidence 5433 23456666664
No 196
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=98.80 E-value=2.4e-07 Score=99.65 Aligned_cols=112 Identities=16% Similarity=0.182 Sum_probs=77.1
Q ss_pred CcceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhh----cc-cchhhccccccCC-CC-Cccceeeeccc
Q 006662 476 RYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GL-IGTYQNWCEAMST-YP-RTYDLIHADSI 548 (636)
Q Consensus 476 ~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl-i~~~~~~ce~~~~-yp-~t~Dl~H~~~~ 548 (636)
...+|||+|||.|.++.+|++.+. .|+.+|.+..++..+.++ |+ +-+++ +..+.. .+ .+||+|-++..
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~g~---~V~gvDis~~al~~A~~n~~~~~~~v~~~~--~D~~~~~~~~~~fD~Ii~npp 307 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARMGA---EVVGVEDDLASVLSLQKGLEANALKAQALH--SDVDEALTEEARFDIIVTNPP 307 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHTTC---EEEEEESBHHHHHHHHHHHHHTTCCCEEEE--CSTTTTSCTTCCEEEEEECCC
T ss_pred CCCEEEEEeeeCCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHHcCCCeEEEE--cchhhccccCCCeEEEEECCc
Confidence 356899999999999999998864 667777776777776654 22 22222 112221 23 79999999888
Q ss_pred cccCCC--CcCHHHHHHHHhhcccCCcEEEEEeCH--HHHHHHHHHHh
Q 006662 549 FSLYKD--RCEMEDVLLEMDRILRPEGSVIIRDDV--DILVKIKSITD 592 (636)
Q Consensus 549 fs~~~~--~c~~~~~l~e~dRiLrPgG~~i~~d~~--~~~~~~~~~~~ 592 (636)
|..... .-....++-++-|+|||||.++|..+. .....+++...
T Consensus 308 ~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~~l~~~~~l~~~f~ 355 (381)
T 3dmg_A 308 FHVGGAVILDVAQAFVNVAAARLRPGGVFFLVSNPFLKYEPLLEEKFG 355 (381)
T ss_dssp CCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEECTTSCHHHHHHHHHS
T ss_pred hhhcccccHHHHHHHHHHHHHhcCcCcEEEEEEcCCCChHHHHHHhhc
Confidence 865332 234568999999999999999997543 24445555544
No 197
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=98.80 E-value=3.3e-09 Score=106.49 Aligned_cols=98 Identities=12% Similarity=0.178 Sum_probs=67.1
Q ss_pred CcEEEEeCCCCcHHHHHHhhc--CCEEEEcCcCCchHHHHHHHHHc----CC--CeEEEEeccccC---CCC---CCCee
Q 006662 219 IRTAIDTGCGVASWGAYLMSR--NILAVSFAPRDTHEAQVQFALER----GV--PALIGVMASIRL---PYP---SRAFD 284 (636)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~--~v~vv~i~p~Dis~a~l~~A~er----g~--~~~~~~~d~~~L---pf~---~~sFD 284 (636)
..+|||+|||+|.++..++++ +..++++ |+++.+++.|+++ +. .+.+..+|.... +++ +++||
T Consensus 66 ~~~vLDlG~G~G~~~~~la~~~~~~~v~gv---D~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD 142 (254)
T 2h00_A 66 LRRGIDIGTGASCIYPLLGATLNGWYFLAT---EVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYD 142 (254)
T ss_dssp CCEEEEESCTTTTHHHHHHHHHHCCEEEEE---ESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBS
T ss_pred CCEEEEeCCChhHHHHHHHHhCCCCeEEEE---ECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCccc
Confidence 458999999999999999876 5666677 8899999888754 33 278888886542 444 26899
Q ss_pred EEEeccccccccc-------------Ch-HHHHHHHHhcccCCcEEEEE
Q 006662 285 MAHCSRCLIPWGQ-------------YD-GLYLIEVDRVLRPGGYWILS 319 (636)
Q Consensus 285 lV~~s~~L~h~~~-------------d~-~~~L~el~RvLKPGG~Liis 319 (636)
+|+++..+++... .+ ..++.++.|+|||||.+.+.
T Consensus 143 ~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~ 191 (254)
T 2h00_A 143 FCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFV 191 (254)
T ss_dssp EEEECCCCC-------------------------CTTTTHHHHTHHHHH
T ss_pred EEEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEE
Confidence 9999866543320 11 24567888999998887665
No 198
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=98.80 E-value=3.9e-07 Score=97.82 Aligned_cols=114 Identities=15% Similarity=0.099 Sum_probs=74.3
Q ss_pred cceEeeecccchhhhhhhcCCC-eEEEEecCCCCCccchHHHHhh----cccc---hhhccccccCCCC-Cccceeeecc
Q 006662 477 YRNLLDMNAYLGGFAAALVDDP-LWVMNTVPVEAKINTLGVIYER----GLIG---TYQNWCEAMSTYP-RTYDLIHADS 547 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~~~-v~~mnv~~~~~~~~~l~~~~eR----gli~---~~~~~ce~~~~yp-~t~Dl~H~~~ 547 (636)
..+|||+|||+|.++.+|++.. - ..|+.+|.++.++..+.++ |+-. +--.+...+..+| .+||+|-++.
T Consensus 223 ~~~VLDlGcG~G~~s~~la~~~p~--~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~~~~~~fD~Ii~np 300 (375)
T 4dcm_A 223 EGEIVDLGCGNGVIGLTLLDKNPQ--AKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNP 300 (375)
T ss_dssp CSEEEEETCTTCHHHHHHHHHCTT--CEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTTCCTTCEEEEEECC
T ss_pred CCeEEEEeCcchHHHHHHHHHCCC--CEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhccCCCCCeeEEEECC
Confidence 4789999999999999998762 1 2455666666677666543 3321 1002233444555 7999999988
Q ss_pred ccccC--CCCcCHHHHHHHHhhcccCCcEEEEEeCH--HHHHHHHHHHh
Q 006662 548 IFSLY--KDRCEMEDVLLEMDRILRPEGSVIIRDDV--DILVKIKSITD 592 (636)
Q Consensus 548 ~fs~~--~~~c~~~~~l~e~dRiLrPgG~~i~~d~~--~~~~~~~~~~~ 592 (636)
.|... ..+-....+|.++-|+|||||.++|..+. .....++++..
T Consensus 301 pfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n~~~~~~~~l~~~fg 349 (375)
T 4dcm_A 301 PFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFG 349 (375)
T ss_dssp CC-------CCHHHHHHHHHHHHEEEEEEEEEEEETTSCHHHHHHHHHS
T ss_pred CcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEECCcCHHHHHHHhcC
Confidence 87532 22333457899999999999999996432 34555666555
No 199
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.79 E-value=3.3e-09 Score=109.40 Aligned_cols=92 Identities=18% Similarity=0.173 Sum_probs=64.0
Q ss_pred cEEEEeCCCCcHHHHHHhhc-CCEEEEcCcCCchHHHHHHHHHcC-------CCeEEE--EeccccCCCCCCCeeEEEec
Q 006662 220 RTAIDTGCGVASWGAYLMSR-NILAVSFAPRDTHEAQVQFALERG-------VPALIG--VMASIRLPYPSRAFDMAHCS 289 (636)
Q Consensus 220 r~VLDIGCGtG~~a~~La~~-~v~vv~i~p~Dis~a~l~~A~erg-------~~~~~~--~~d~~~Lpf~~~sFDlV~~s 289 (636)
.+|||+|||+|.++..++++ .+.++++ ++ ++..+.++. .++.+. ++|...+| +++||+|+|.
T Consensus 84 ~~VLDlGcGtG~~s~~la~~~~V~gVD~-----s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~Vvsd 155 (276)
T 2wa2_A 84 GTVVDLGCGRGSWSYYAASQPNVREVKA-----YT-LGTSGHEKPRLVETFGWNLITFKSKVDVTKME--PFQADTVLCD 155 (276)
T ss_dssp EEEEEESCTTCHHHHHHHTSTTEEEEEE-----EC-CCCTTSCCCCCCCCTTGGGEEEECSCCGGGCC--CCCCSEEEEC
T ss_pred CEEEEeccCCCHHHHHHHHcCCEEEEEC-----ch-hhhhhhhchhhhhhcCCCeEEEeccCcHhhCC--CCCcCEEEEC
Confidence 49999999999999999987 3444444 43 222222221 146777 77887765 6789999997
Q ss_pred ccccccccCh----H---HHHHHHHhcccCCc--EEEEEeC
Q 006662 290 RCLIPWGQYD----G---LYLIEVDRVLRPGG--YWILSGP 321 (636)
Q Consensus 290 ~~L~h~~~d~----~---~~L~el~RvLKPGG--~Liis~p 321 (636)
.+ ++..++ . .+|.++.++||||| .|++...
T Consensus 156 ~~--~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~ 194 (276)
T 2wa2_A 156 IG--ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVL 194 (276)
T ss_dssp CC--CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEES
T ss_pred CC--cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeC
Confidence 66 222221 1 37899999999999 9998754
No 200
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=98.79 E-value=5.5e-09 Score=99.78 Aligned_cols=118 Identities=15% Similarity=0.225 Sum_probs=83.1
Q ss_pred cceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhh----cc--cchhh-ccccccCCCCCccceeeecccc
Q 006662 477 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GL--IGTYQ-NWCEAMSTYPRTYDLIHADSIF 549 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl--i~~~~-~~ce~~~~yp~t~Dl~H~~~~f 549 (636)
..+|||+|||.|.++..|++.+. +|+.+|.++.++..+.++ |+ +-..+ |.. .+.. +.+||+|.+.++|
T Consensus 33 ~~~vLdiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~-~~~~-~~~~D~v~~~~~l 107 (199)
T 2xvm_A 33 PGKTLDLGCGNGRNSLYLAANGY---DVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLN-NLTF-DRQYDFILSTVVL 107 (199)
T ss_dssp SCEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGG-GCCC-CCCEEEEEEESCG
T ss_pred CCeEEEEcCCCCHHHHHHHHCCC---eEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchh-hCCC-CCCceEEEEcchh
Confidence 45999999999999999988754 667777776777777654 33 22222 222 2222 7899999998887
Q ss_pred ccCCCCcCHHHHHHHHhhcccCCcEEEEEeCH--------------HHHHHHHHHHhcCCCceEEec
Q 006662 550 SLYKDRCEMEDVLLEMDRILRPEGSVIIRDDV--------------DILVKIKSITDGMEWEGRIAD 602 (636)
Q Consensus 550 s~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~~--------------~~~~~~~~~~~~~~W~~~~~~ 602 (636)
.... .-+...+|-++.|+|+|||.+++.+.. -....++++++. |++....
T Consensus 108 ~~~~-~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--f~~~~~~ 171 (199)
T 2xvm_A 108 MFLE-AKTIPGLIANMQRCTKPGGYNLIVAAMDTADYPCTVGFPFAFKEGELRRYYEG--WERVKYN 171 (199)
T ss_dssp GGSC-GGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCCSCCSCCBCTTHHHHHTTT--SEEEEEE
T ss_pred hhCC-HHHHHHHHHHHHHhcCCCeEEEEEEeeccCCcCCCCCCCCccCHHHHHHHhcC--CeEEEec
Confidence 7543 235689999999999999998875311 033566777776 8776543
No 201
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=98.78 E-value=9.4e-09 Score=104.75 Aligned_cols=108 Identities=14% Similarity=0.140 Sum_probs=78.7
Q ss_pred hhhccCCCCCcceEeeecccchhhhhhhcC-CCeEEEEecCCCCCccchHHHHhh----cccchhhccccccCCCCCccc
Q 006662 467 VDYQLAQPGRYRNLLDMNAYLGGFAAALVD-DPLWVMNTVPVEAKINTLGVIYER----GLIGTYQNWCEAMSTYPRTYD 541 (636)
Q Consensus 467 ~~~~l~~~~~~r~vlD~~~g~ggfaa~l~~-~~v~~mnv~~~~~~~~~l~~~~eR----gli~~~~~~ce~~~~yp~t~D 541 (636)
++..+.. ....+|||+|||.|+++.+|++ .+. +|+.+|.++.++..+.++ |+..-+.-.+..+..+|.+||
T Consensus 56 ~~~~~~~-~~~~~vLDiGcG~G~~~~~l~~~~~~---~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~fD 131 (287)
T 1kpg_A 56 ALGKLGL-QPGMTLLDVGCGWGATMMRAVEKYDV---NVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFDEPVD 131 (287)
T ss_dssp HHTTTTC-CTTCEEEEETCTTSHHHHHHHHHHCC---EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCCCCCS
T ss_pred HHHHcCC-CCcCEEEEECCcccHHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCCCCee
Confidence 3333333 3467899999999999999984 454 677778777888888776 442222222233445679999
Q ss_pred eeeeccccccCCCCcCHHHHHHHHhhcccCCcEEEEEe
Q 006662 542 LIHADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRD 579 (636)
Q Consensus 542 l~H~~~~fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d 579 (636)
+|.+.++|..... -+...+|-|+-|+|||||.+++.+
T Consensus 132 ~v~~~~~l~~~~~-~~~~~~l~~~~~~LkpgG~l~~~~ 168 (287)
T 1kpg_A 132 RIVSIGAFEHFGH-ERYDAFFSLAHRLLPADGVMLLHT 168 (287)
T ss_dssp EEEEESCGGGTCT-TTHHHHHHHHHHHSCTTCEEEEEE
T ss_pred EEEEeCchhhcCh-HHHHHHHHHHHHhcCCCCEEEEEE
Confidence 9999888876532 356899999999999999999975
No 202
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=98.78 E-value=1.9e-08 Score=104.57 Aligned_cols=98 Identities=14% Similarity=0.191 Sum_probs=70.3
Q ss_pred CcEEEEeCCCCcHHHHHHhhc--CCEEEEcCcCCchHHHHHHHHHc----------CCCeEEEEeccccC-CCCCCCeeE
Q 006662 219 IRTAIDTGCGVASWGAYLMSR--NILAVSFAPRDTHEAQVQFALER----------GVPALIGVMASIRL-PYPSRAFDM 285 (636)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~--~v~vv~i~p~Dis~a~l~~A~er----------g~~~~~~~~d~~~L-pf~~~sFDl 285 (636)
+++|||||||+|.++..+++. ...++.+ |+++.+++.|+++ ...+.+..+|.... ...+++||+
T Consensus 84 ~~~VLdiG~G~G~~~~~l~~~~~~~~V~~V---Did~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDv 160 (294)
T 3adn_A 84 AKHVLIIGGGDGAMLREVTRHKNVESITMV---EIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDV 160 (294)
T ss_dssp CCEEEEESCTTCHHHHHHHTCTTCCEEEEE---CSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEE
T ss_pred CCEEEEEeCChhHHHHHHHhCCCCCEEEEE---ECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccE
Confidence 459999999999999999987 2344455 8888888888754 23567777776543 345688999
Q ss_pred EEecccccccccCh----HHHHHHHHhcccCCcEEEEEe
Q 006662 286 AHCSRCLIPWGQYD----GLYLIEVDRVLRPGGYWILSG 320 (636)
Q Consensus 286 V~~s~~L~h~~~d~----~~~L~el~RvLKPGG~Liis~ 320 (636)
|++.... ++.... ..+++++.++|+|||.|++..
T Consensus 161 Ii~D~~~-p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 198 (294)
T 3adn_A 161 IISDCTD-PIGPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp EEECC-----------CCHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEECCCC-ccCcchhccHHHHHHHHHHhcCCCCEEEEec
Confidence 9995433 333222 679999999999999999975
No 203
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.78 E-value=4.5e-09 Score=107.78 Aligned_cols=92 Identities=16% Similarity=0.130 Sum_probs=63.4
Q ss_pred cEEEEeCCCCcHHHHHHhhc-CCEEEEcCcCCchHHHHHHHHHcC-------CCeEEE--EeccccCCCCCCCeeEEEec
Q 006662 220 RTAIDTGCGVASWGAYLMSR-NILAVSFAPRDTHEAQVQFALERG-------VPALIG--VMASIRLPYPSRAFDMAHCS 289 (636)
Q Consensus 220 r~VLDIGCGtG~~a~~La~~-~v~vv~i~p~Dis~a~l~~A~erg-------~~~~~~--~~d~~~Lpf~~~sFDlV~~s 289 (636)
.+|||||||+|.++..++++ .+.++++++ ++..+.++. .++.+. ++|+..++ +++||+|+|.
T Consensus 76 ~~VLDlGcGtG~~s~~la~~~~V~gvD~s~------m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~V~sd 147 (265)
T 2oxt_A 76 GRVVDLGCGRGGWSYYAASRPHVMDVRAYT------LGVGGHEVPRITESYGWNIVKFKSRVDIHTLP--VERTDVIMCD 147 (265)
T ss_dssp EEEEEESCTTSHHHHHHHTSTTEEEEEEEC------CCCSSCCCCCCCCBTTGGGEEEECSCCTTTSC--CCCCSEEEEC
T ss_pred CEEEEeCcCCCHHHHHHHHcCcEEEEECch------hhhhhhhhhhhhhccCCCeEEEecccCHhHCC--CCCCcEEEEe
Confidence 49999999999999999987 344444443 211121111 146777 77877765 6789999997
Q ss_pred ccccccccCh----H---HHHHHHHhcccCCc--EEEEEeC
Q 006662 290 RCLIPWGQYD----G---LYLIEVDRVLRPGG--YWILSGP 321 (636)
Q Consensus 290 ~~L~h~~~d~----~---~~L~el~RvLKPGG--~Liis~p 321 (636)
.+ +...++ . .+|.++.++||||| .|++...
T Consensus 148 ~~--~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~ 186 (265)
T 2oxt_A 148 VG--ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVL 186 (265)
T ss_dssp CC--CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEES
T ss_pred Cc--ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeC
Confidence 65 222222 1 37899999999999 9999754
No 204
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=98.78 E-value=4.5e-08 Score=104.84 Aligned_cols=129 Identities=15% Similarity=0.055 Sum_probs=90.1
Q ss_pred HHHHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhcCC--EEEEcCcCCchHHHHHHHHHc----CC--CeEEEEeccc
Q 006662 203 AYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNI--LAVSFAPRDTHEAQVQFALER----GV--PALIGVMASI 274 (636)
Q Consensus 203 ~~id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~~v--~vv~i~p~Dis~a~l~~A~er----g~--~~~~~~~d~~ 274 (636)
.....+..+. ..++. +|||+|||+|.++..++..+. .++++ |+++.+++.|+++ +. .+.+.++|..
T Consensus 205 ~la~~l~~~~-~~~~~--~vLD~gCGsG~~~i~~a~~~~~~~v~g~---Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~ 278 (373)
T 3tm4_A 205 SIANAMIELA-ELDGG--SVLDPMCGSGTILIELALRRYSGEIIGI---EKYRKHLIGAEMNALAAGVLDKIKFIQGDAT 278 (373)
T ss_dssp HHHHHHHHHH-TCCSC--CEEETTCTTCHHHHHHHHTTCCSCEEEE---ESCHHHHHHHHHHHHHTTCGGGCEEEECCGG
T ss_pred HHHHHHHHhh-cCCCC--EEEEccCcCcHHHHHHHHhCCCCeEEEE---eCCHHHHHHHHHHHHHcCCCCceEEEECChh
Confidence 3444455554 34444 899999999999999999865 56666 8899999888754 44 5789999999
Q ss_pred cCCCCCCCeeEEEeccccccccc------Ch-HHHHHHHHhcccCCcEEEEEeCCCCccccccCCCCchhhhHHHHHHHH
Q 006662 275 RLPYPSRAFDMAHCSRCLIPWGQ------YD-GLYLIEVDRVLRPGGYWILSGPPVNWESHWKGWNRTTEDLKSEQNGIE 347 (636)
Q Consensus 275 ~Lpf~~~sFDlV~~s~~L~h~~~------d~-~~~L~el~RvLKPGG~Liis~p~~~w~~~~~~W~~t~e~l~~~~~~ie 347 (636)
.+++++++||+|+++..+..... +. ..++.++.++| ||.+++..+ . .+.++
T Consensus 279 ~~~~~~~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~~-------------~-------~~~~~ 336 (373)
T 3tm4_A 279 QLSQYVDSVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVL--EKRGVFITT-------------E-------KKAIE 336 (373)
T ss_dssp GGGGTCSCEEEEEEECCCC------CCHHHHHHHHHHHHHHHE--EEEEEEEES-------------C-------HHHHH
T ss_pred hCCcccCCcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHc--CCeEEEEEC-------------C-------HHHHH
Confidence 99988899999999765422211 11 56788999988 455555433 0 12355
Q ss_pred HHHHHhceEeec
Q 006662 348 TIARSLCWKKLI 359 (636)
Q Consensus 348 ~la~~l~Wk~v~ 359 (636)
+.+...+|+...
T Consensus 337 ~~~~~~G~~~~~ 348 (373)
T 3tm4_A 337 EAIAENGFEIIH 348 (373)
T ss_dssp HHHHHTTEEEEE
T ss_pred HHHHHcCCEEEE
Confidence 667778887654
No 205
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.77 E-value=1.2e-08 Score=98.44 Aligned_cols=135 Identities=11% Similarity=0.066 Sum_probs=98.4
Q ss_pred cceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhhcc-cchhh-ccccccCCCCCccceeeeccccccCCC
Q 006662 477 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERGL-IGTYQ-NWCEAMSTYPRTYDLIHADSIFSLYKD 554 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRgl-i~~~~-~~ce~~~~yp~t~Dl~H~~~~fs~~~~ 554 (636)
..+|||+|||.|.++.+|++.+. +|+.+|.++.++..+.++.- +..+. |. +.++.-+.+||+|.+.++|....
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l~~~~- 116 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLGH---QIEGLEPATRLVELARQTHPSVTFHHGTI-TDLSDSPKRWAGLLAWYSLIHMG- 116 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTTC---CEEEECCCHHHHHHHHHHCTTSEEECCCG-GGGGGSCCCEEEEEEESSSTTCC-
T ss_pred CCeEEEecCCCCHHHHHHHhcCC---eEEEEeCCHHHHHHHHHhCCCCeEEeCcc-cccccCCCCeEEEEehhhHhcCC-
Confidence 45899999999999999988854 56667777789999888732 12222 22 22322238999999988777543
Q ss_pred CcCHHHHHHHHhhcccCCcEEEEEeCH----------------HHHHHHHHHHhcCCCceEEeccCCCCCCcceEEEEEe
Q 006662 555 RCEMEDVLLEMDRILRPEGSVIIRDDV----------------DILVKIKSITDGMEWEGRIADHENGPRQREKILFANK 618 (636)
Q Consensus 555 ~c~~~~~l~e~dRiLrPgG~~i~~d~~----------------~~~~~~~~~~~~~~W~~~~~~~e~~~~~~~~~l~~~K 618 (636)
.-+...+|-++-|+|||||.+++.+.. -....++++++...|++.......+ .+...|...|
T Consensus 117 ~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~--~p~~~l~~~~ 194 (203)
T 3h2b_A 117 PGELPDALVALRMAVEDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQALETAGFQVTSSHWDPR--FPHAYLTAEA 194 (203)
T ss_dssp TTTHHHHHHHHHHTEEEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHHHHTTEEEEEEEECTT--SSEEEEEEEE
T ss_pred HHHHHHHHHHHHHHcCCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHHHHCCCcEEEEEecCC--Ccchhhhhhh
Confidence 336789999999999999999998521 1357888999999999887665544 4555555554
No 206
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=98.77 E-value=1.6e-08 Score=101.78 Aligned_cols=135 Identities=12% Similarity=0.064 Sum_probs=99.4
Q ss_pred cceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhhcc-cchhh-ccccccCCCCCccceeeecc-ccccCC
Q 006662 477 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERGL-IGTYQ-NWCEAMSTYPRTYDLIHADS-IFSLYK 553 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRgl-i~~~~-~~ce~~~~yp~t~Dl~H~~~-~fs~~~ 553 (636)
..+|||+|||.|.++..|++... +|+.+|.++.++..+.++.- +..+. |.. .+. ++.+||+|.+.+ +|....
T Consensus 51 ~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~-~~~-~~~~fD~v~~~~~~l~~~~ 125 (263)
T 3pfg_A 51 AASLLDVACGTGMHLRHLADSFG---TVEGLELSADMLAIARRRNPDAVLHHGDMR-DFS-LGRRFSAVTCMFSSIGHLA 125 (263)
T ss_dssp CCEEEEETCTTSHHHHHHTTTSS---EEEEEESCHHHHHHHHHHCTTSEEEECCTT-TCC-CSCCEEEEEECTTGGGGSC
T ss_pred CCcEEEeCCcCCHHHHHHHHcCC---eEEEEECCHHHHHHHHhhCCCCEEEECChH-HCC-ccCCcCEEEEcCchhhhcC
Confidence 47899999999999999998854 67777888789999888732 12222 221 222 268999999987 777655
Q ss_pred CCcCHHHHHHHHhhcccCCcEEEEEeC----------------------------------------------H------
Q 006662 554 DRCEMEDVLLEMDRILRPEGSVIIRDD----------------------------------------------V------ 581 (636)
Q Consensus 554 ~~c~~~~~l~e~dRiLrPgG~~i~~d~----------------------------------------------~------ 581 (636)
+.-+...+|-++.|+|||||.++|.+- .
T Consensus 126 ~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (263)
T 3pfg_A 126 GQAELDAALERFAAHVLPDGVVVVEPWWFPENFTPGYVAAGTVEAGGTTVTRVSHSSREGEATRIEVHYLVAGPDRGITH 205 (263)
T ss_dssp HHHHHHHHHHHHHHTEEEEEEEEECCCCCTTTCCTTEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEETTTEEEE
T ss_pred CHHHHHHHHHHHHHhcCCCcEEEEEeccChhhccccccccceeccCCceeEEEEEEEecCcEEEEEEEEEEecCCCcEEE
Confidence 445667899999999999999999520 0
Q ss_pred ---------HHHHHHHHHHhcCCCceEEeccCCCCCCcceEEEEEec
Q 006662 582 ---------DILVKIKSITDGMEWEGRIADHENGPRQREKILFANKK 619 (636)
Q Consensus 582 ---------~~~~~~~~~~~~~~W~~~~~~~e~~~~~~~~~l~~~K~ 619 (636)
-..+.++++++.-.+++...... .....+.+++|+
T Consensus 206 ~~~~~~~~~~t~~el~~ll~~aGF~v~~~~~~---~~~~~~~va~K~ 249 (263)
T 3pfg_A 206 HEESHRITLFTREQYERAFTAAGLSVEFMPGG---PSGRGLFTGLPG 249 (263)
T ss_dssp EEEEEEEECCCHHHHHHHHHHTTEEEEEESST---TTSSCEEEEEEC
T ss_pred EEEEEEEEeecHHHHHHHHHHCCCEEEEeeCC---CCCceeEEEecC
Confidence 02578899999988887755333 235678999997
No 207
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=98.77 E-value=2.2e-08 Score=97.77 Aligned_cols=140 Identities=11% Similarity=0.133 Sum_probs=93.9
Q ss_pred cceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhhc----c-------cchhh-ccccccCCCCCccceee
Q 006662 477 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERG----L-------IGTYQ-NWCEAMSTYPRTYDLIH 544 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRg----l-------i~~~~-~~ce~~~~yp~t~Dl~H 544 (636)
..+|||+|||.|.++.+|++..- ..+|+.+|.++.++..+.++- + +..+. |. +....-+.+||+|.
T Consensus 30 ~~~vLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~-~~~~~~~~~fD~V~ 107 (219)
T 3jwg_A 30 AKKVIDLGCGEGNLLSLLLKDKS-FEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSL-VYRDKRFSGYDAAT 107 (219)
T ss_dssp CCEEEEETCTTCHHHHHHHTSTT-CCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCS-SSCCGGGTTCSEEE
T ss_pred CCEEEEecCCCCHHHHHHHhcCC-CCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcc-cccccccCCCCEEE
Confidence 56999999999999999988631 136677777778888887762 1 22222 22 11111237999999
Q ss_pred eccccccCCCCcCHHHHHHHHhhcccCCcEEEEEeCHHH----------------------HHHHH----HHHhcCCCce
Q 006662 545 ADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDDVDI----------------------LVKIK----SITDGMEWEG 598 (636)
Q Consensus 545 ~~~~fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~~~~----------------------~~~~~----~~~~~~~W~~ 598 (636)
+..++.... .-++..+|-++-|+|||||.+|+....+. ...++ ++++.-.+++
T Consensus 108 ~~~~l~~~~-~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~Gf~v 186 (219)
T 3jwg_A 108 VIEVIEHLD-ENRLQAFEKVLFEFTRPQTVIVSTPNKEYNFHYGNLFEGNLRHRDHRFEWTRKEFQTWAVKVAEKYGYSV 186 (219)
T ss_dssp EESCGGGCC-HHHHHHHHHHHHTTTCCSEEEEEEEBGGGGGCCCCT-----GGGCCTTSBCHHHHHHHHHHHHHHHTEEE
T ss_pred EHHHHHhCC-HHHHHHHHHHHHHhhCCCEEEEEccchhhhhhhcccCcccccccCceeeecHHHHHHHHHHHHHHCCcEE
Confidence 988887653 22346899999999999998887643321 12333 7777777887
Q ss_pred EEec---cCCCCCCcceEEEEEec
Q 006662 599 RIAD---HENGPRQREKILFANKK 619 (636)
Q Consensus 599 ~~~~---~e~~~~~~~~~l~~~K~ 619 (636)
.... ....--.+.+|.|++|.
T Consensus 187 ~~~~~g~~~~~~g~~~qi~~~~~~ 210 (219)
T 3jwg_A 187 RFLQIGEIDDEFGSPTQMGVFTLG 210 (219)
T ss_dssp EEEEESCCCTTSCCSEEEEEEEEC
T ss_pred EEEecCCccccCCCCeEEEEEecc
Confidence 7552 22222247899999995
No 208
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=98.76 E-value=1.2e-08 Score=95.64 Aligned_cols=131 Identities=17% Similarity=0.177 Sum_probs=93.2
Q ss_pred CCcceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhhcccchhhccccccCCCC-CccceeeeccccccCC
Q 006662 475 GRYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERGLIGTYQNWCEAMSTYP-RTYDLIHADSIFSLYK 553 (636)
Q Consensus 475 ~~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRgli~~~~~~ce~~~~yp-~t~Dl~H~~~~fs~~~ 553 (636)
....+|||+|||.|.++.+|.+.. . +|+.+|.++.++..+.++ . .-+.-.+.. .++| .+||+|.+..++....
T Consensus 16 ~~~~~vLDiG~G~G~~~~~l~~~~--~-~v~~vD~s~~~~~~a~~~-~-~~v~~~~~d-~~~~~~~~D~v~~~~~l~~~~ 89 (170)
T 3i9f_A 16 GKKGVIVDYGCGNGFYCKYLLEFA--T-KLYCIDINVIALKEVKEK-F-DSVITLSDP-KEIPDNSVDFILFANSFHDMD 89 (170)
T ss_dssp SCCEEEEEETCTTCTTHHHHHTTE--E-EEEEECSCHHHHHHHHHH-C-TTSEEESSG-GGSCTTCEEEEEEESCSTTCS
T ss_pred CCCCeEEEECCCCCHHHHHHHhhc--C-eEEEEeCCHHHHHHHHHh-C-CCcEEEeCC-CCCCCCceEEEEEccchhccc
Confidence 346789999999999999999885 2 788888888899999888 2 212211222 4555 7999999988887553
Q ss_pred CCcCHHHHHHHHhhcccCCcEEEEEeCHH-------------HHHHHHHHHhcCCCceEEeccCCCCCCcceEEEEEec
Q 006662 554 DRCEMEDVLLEMDRILRPEGSVIIRDDVD-------------ILVKIKSITDGMEWEGRIADHENGPRQREKILFANKK 619 (636)
Q Consensus 554 ~~c~~~~~l~e~dRiLrPgG~~i~~d~~~-------------~~~~~~~~~~~~~W~~~~~~~e~~~~~~~~~l~~~K~ 619 (636)
+...+|-|+-|+|||||.+++.+... ....++++++ .|+......- + .....+++.|+
T Consensus 90 ---~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--Gf~~~~~~~~-~--~~~~~l~~~~~ 160 (170)
T 3i9f_A 90 ---DKQHVISEVKRILKDDGRVIIIDWRKENTGIGPPLSIRMDEKDYMGWFS--NFVVEKRFNP-T--PYHFGLVLKRK 160 (170)
T ss_dssp ---CHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSSCGGGCCCHHHHHHHTT--TEEEEEEECS-S--TTEEEEEEEEC
T ss_pred ---CHHHHHHHHHHhcCCCCEEEEEEcCccccccCchHhhhcCHHHHHHHHh--CcEEEEccCC-C--CceEEEEEecC
Confidence 56899999999999999999985211 2345666666 5655432221 1 24677887775
No 209
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=98.76 E-value=6.2e-08 Score=99.98 Aligned_cols=114 Identities=16% Similarity=0.164 Sum_probs=82.7
Q ss_pred HHHHHHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhc-CCEEEEcCcCCchHHHHHHHHHc----CC--CeEEEEecc
Q 006662 201 ADAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR-NILAVSFAPRDTHEAQVQFALER----GV--PALIGVMAS 273 (636)
Q Consensus 201 ~~~~id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~-~v~vv~i~p~Dis~a~l~~A~er----g~--~~~~~~~d~ 273 (636)
.+.+++.+.+.+...++. +|||+|||+|.++..+++. +..++++ |+++.+++.|+++ +. .+.+...|.
T Consensus 108 te~lv~~~l~~~~~~~~~--~vLDlG~GsG~~~~~la~~~~~~v~~v---Dis~~al~~A~~n~~~~~l~~~v~~~~~D~ 182 (284)
T 1nv8_A 108 TEELVELALELIRKYGIK--TVADIGTGSGAIGVSVAKFSDAIVFAT---DVSSKAVEIARKNAERHGVSDRFFVRKGEF 182 (284)
T ss_dssp HHHHHHHHHHHHHHHTCC--EEEEESCTTSHHHHHHHHHSSCEEEEE---ESCHHHHHHHHHHHHHTTCTTSEEEEESST
T ss_pred HHHHHHHHHHHhcccCCC--EEEEEeCchhHHHHHHHHCCCCEEEEE---ECCHHHHHHHHHHHHHcCCCCceEEEECcc
Confidence 455666676666533433 8999999999999999988 6667777 8999999988754 33 278888887
Q ss_pred ccCCCCCCCe---eEEEeccccccc----------c--------cChHHHHHHHH-hcccCCcEEEEEeC
Q 006662 274 IRLPYPSRAF---DMAHCSRCLIPW----------G--------QYDGLYLIEVD-RVLRPGGYWILSGP 321 (636)
Q Consensus 274 ~~Lpf~~~sF---DlV~~s~~L~h~----------~--------~d~~~~L~el~-RvLKPGG~Liis~p 321 (636)
.. +++ ++| |+|+++.-.+.. . .+...+++++. +.|+|||++++...
T Consensus 183 ~~-~~~-~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~ 250 (284)
T 1nv8_A 183 LE-PFK-EKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIG 250 (284)
T ss_dssp TG-GGG-GGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECC
T ss_pred hh-hcc-cccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEEC
Confidence 65 222 478 999997322111 0 11127899999 99999999999754
No 210
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=98.76 E-value=5.2e-08 Score=99.77 Aligned_cols=93 Identities=10% Similarity=0.068 Sum_probs=75.0
Q ss_pred cEEEEeCCCCcHHHHHHhhcC--CEEEEcCcCCchHHHHHHHHHc----CC-CeEEEEeccccCCCCCCCeeEEEecccc
Q 006662 220 RTAIDTGCGVASWGAYLMSRN--ILAVSFAPRDTHEAQVQFALER----GV-PALIGVMASIRLPYPSRAFDMAHCSRCL 292 (636)
Q Consensus 220 r~VLDIGCGtG~~a~~La~~~--v~vv~i~p~Dis~a~l~~A~er----g~-~~~~~~~d~~~Lpf~~~sFDlV~~s~~L 292 (636)
.+|||+|||+|.++..+++.. ..++++ |+++.+++.|+++ +. ++.+..+|....+. .++||+|++....
T Consensus 121 ~~VLDlgcG~G~~s~~la~~~~~~~V~~v---D~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~~~-~~~~D~Vi~d~p~ 196 (272)
T 3a27_A 121 EVVVDMFAGIGYFTIPLAKYSKPKLVYAI---EKNPTAYHYLCENIKLNKLNNVIPILADNRDVEL-KDVADRVIMGYVH 196 (272)
T ss_dssp CEEEETTCTTTTTHHHHHHHTCCSEEEEE---ECCHHHHHHHHHHHHHTTCSSEEEEESCGGGCCC-TTCEEEEEECCCS
T ss_pred CEEEEecCcCCHHHHHHHHhCCCCEEEEE---eCCHHHHHHHHHHHHHcCCCCEEEEECChHHcCc-cCCceEEEECCcc
Confidence 399999999999999999873 366667 8888888887653 33 57788888877744 6789999987643
Q ss_pred cccccChHHHHHHHHhcccCCcEEEEEeC
Q 006662 293 IPWGQYDGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 293 ~h~~~d~~~~L~el~RvLKPGG~Liis~p 321 (636)
+...++.++.++|+|||.++++..
T Consensus 197 -----~~~~~l~~~~~~LkpgG~l~~s~~ 220 (272)
T 3a27_A 197 -----KTHKFLDKTFEFLKDRGVIHYHET 220 (272)
T ss_dssp -----SGGGGHHHHHHHEEEEEEEEEEEE
T ss_pred -----cHHHHHHHHHHHcCCCCEEEEEEc
Confidence 446789999999999999999854
No 211
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=98.75 E-value=1.1e-08 Score=105.45 Aligned_cols=110 Identities=12% Similarity=0.097 Sum_probs=80.0
Q ss_pred HhhhccCCCCCcceEeeecccchhhhhhhcCC-CeEEEEecCCCCCccchHHHHhh----cccchhhccccccCCCCCcc
Q 006662 466 SVDYQLAQPGRYRNLLDMNAYLGGFAAALVDD-PLWVMNTVPVEAKINTLGVIYER----GLIGTYQNWCEAMSTYPRTY 540 (636)
Q Consensus 466 ~~~~~l~~~~~~r~vlD~~~g~ggfaa~l~~~-~v~~mnv~~~~~~~~~l~~~~eR----gli~~~~~~ce~~~~yp~t~ 540 (636)
.++..+.. ....+|||+|||.|+++.+|++. + .+|+.+|.++.++..+.++ |+-+-++-.+..+..++.+|
T Consensus 63 ~~~~~~~~-~~~~~vLDiGcG~G~~~~~la~~~~---~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~f 138 (302)
T 3hem_A 63 LALDKLNL-EPGMTLLDIGCGWGSTMRHAVAEYD---VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEFDEPV 138 (302)
T ss_dssp HHHHTTCC-CTTCEEEEETCTTSHHHHHHHHHHC---CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGCCCCC
T ss_pred HHHHHcCC-CCcCEEEEeeccCcHHHHHHHHhCC---CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHcCCCc
Confidence 34443433 44678999999999999999887 6 3677778877888888776 44222221222223348999
Q ss_pred ceeeeccccccCCCC------cCHHHHHHHHhhcccCCcEEEEEe
Q 006662 541 DLIHADSIFSLYKDR------CEMEDVLLEMDRILRPEGSVIIRD 579 (636)
Q Consensus 541 Dl~H~~~~fs~~~~~------c~~~~~l~e~dRiLrPgG~~i~~d 579 (636)
|+|.+.++|....+. -..+.+|-++.|+|||||.++|.+
T Consensus 139 D~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 183 (302)
T 3hem_A 139 DRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHT 183 (302)
T ss_dssp SEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEE
T ss_pred cEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEE
Confidence 999999888765332 456899999999999999999975
No 212
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=98.75 E-value=2e-08 Score=96.09 Aligned_cols=93 Identities=15% Similarity=0.111 Sum_probs=64.2
Q ss_pred cEEEEeCCCCcHHHHHHhhc-C----------CEEEEcCcCCchHHHHHHHHHcCCCeEEE-EeccccCC--------CC
Q 006662 220 RTAIDTGCGVASWGAYLMSR-N----------ILAVSFAPRDTHEAQVQFALERGVPALIG-VMASIRLP--------YP 279 (636)
Q Consensus 220 r~VLDIGCGtG~~a~~La~~-~----------v~vv~i~p~Dis~a~l~~A~erg~~~~~~-~~d~~~Lp--------f~ 279 (636)
.+|||+|||+|.++..++++ + ..++++ |+++.+ ....+.+. ..|....+ ++
T Consensus 24 ~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~v---D~s~~~------~~~~~~~~~~~d~~~~~~~~~~~~~~~ 94 (196)
T 2nyu_A 24 LRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGV---DLLHIF------PLEGATFLCPADVTDPRTSQRILEVLP 94 (196)
T ss_dssp CEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEE---CSSCCC------CCTTCEEECSCCTTSHHHHHHHHHHSG
T ss_pred CEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEE---echhcc------cCCCCeEEEeccCCCHHHHHHHHHhcC
Confidence 49999999999999999987 3 556666 555421 11235666 66654432 34
Q ss_pred CCCeeEEEeccccc---ccccCh-------HHHHHHHHhcccCCcEEEEEeC
Q 006662 280 SRAFDMAHCSRCLI---PWGQYD-------GLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 280 ~~sFDlV~~s~~L~---h~~~d~-------~~~L~el~RvLKPGG~Liis~p 321 (636)
+++||+|+|..+++ ++..+. ..++.++.++|||||.|++...
T Consensus 95 ~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 146 (196)
T 2nyu_A 95 GRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTW 146 (196)
T ss_dssp GGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEec
Confidence 56899999966442 221222 3789999999999999999864
No 213
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.75 E-value=1.1e-08 Score=105.27 Aligned_cols=114 Identities=11% Similarity=0.058 Sum_probs=78.1
Q ss_pred HHHHHHHHhhccCCCCCcEEEEeCCCC--cHHHHHHhhc---CCEEEEcCcCCchHHHHHHHHHcCC-----CeEEEEec
Q 006662 203 AYIDDIGKLINLKDGSIRTAIDTGCGV--ASWGAYLMSR---NILAVSFAPRDTHEAQVQFALERGV-----PALIGVMA 272 (636)
Q Consensus 203 ~~id~L~~lL~l~~g~~r~VLDIGCGt--G~~a~~La~~---~v~vv~i~p~Dis~a~l~~A~erg~-----~~~~~~~d 272 (636)
.+.....+++.... ..+.|||||||+ +..+..++++ +..++.+ |.++.|++.|+++.. .+.+..+|
T Consensus 64 ~fl~rav~~l~~~~-g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~V---D~sp~mLa~Ar~~l~~~~~~~~~~v~aD 139 (277)
T 3giw_A 64 DWMNRAVAHLAKEA-GIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYV---DNDPIVLTLSQGLLASTPEGRTAYVEAD 139 (277)
T ss_dssp HHHHHHHHHHHHTS-CCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEE---ECCHHHHHTTHHHHCCCSSSEEEEEECC
T ss_pred HHHHHHHHHhcccc-CCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEE---eCChHHHHHHHHHhccCCCCcEEEEEec
Confidence 34444455553222 246899999997 3344444443 5677777 999999998876521 37888888
Q ss_pred cccCC----CC--CCCee-----EEEecccccccccC---hHHHHHHHHhcccCCcEEEEEeC
Q 006662 273 SIRLP----YP--SRAFD-----MAHCSRCLIPWGQY---DGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 273 ~~~Lp----f~--~~sFD-----lV~~s~~L~h~~~d---~~~~L~el~RvLKPGG~Liis~p 321 (636)
...++ .+ .+.|| .|+++.+| ||..+ +..+++++.+.|+|||+|+++..
T Consensus 140 ~~~~~~~l~~~~~~~~~D~~~p~av~~~avL-H~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~ 201 (277)
T 3giw_A 140 MLDPASILDAPELRDTLDLTRPVALTVIAIV-HFVLDEDDAVGIVRRLLEPLPSGSYLAMSIG 201 (277)
T ss_dssp TTCHHHHHTCHHHHTTCCTTSCCEEEEESCG-GGSCGGGCHHHHHHHHHTTSCTTCEEEEEEE
T ss_pred ccChhhhhcccccccccCcCCcchHHhhhhH-hcCCchhhHHHHHHHHHHhCCCCcEEEEEec
Confidence 76642 11 34555 57788888 55445 46899999999999999999964
No 214
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=98.75 E-value=3.3e-08 Score=104.65 Aligned_cols=98 Identities=13% Similarity=0.111 Sum_probs=74.7
Q ss_pred CcEEEEeCCCCcHHHHHHhhc--CCEEEEcCcCCchHHHHHHHHHcC---------CCeEEEEeccccC--CCCCCCeeE
Q 006662 219 IRTAIDTGCGVASWGAYLMSR--NILAVSFAPRDTHEAQVQFALERG---------VPALIGVMASIRL--PYPSRAFDM 285 (636)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~--~v~vv~i~p~Dis~a~l~~A~erg---------~~~~~~~~d~~~L--pf~~~sFDl 285 (636)
..+|||||||+|.++..++++ ...++.+ |+++.+++.|+++. ..+.+..+|.... .+++++||+
T Consensus 121 ~~~VLdIG~G~G~~a~~la~~~~~~~V~~V---Dis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDl 197 (334)
T 1xj5_A 121 PKKVLVIGGGDGGVLREVARHASIEQIDMC---EIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDA 197 (334)
T ss_dssp CCEEEEETCSSSHHHHHHTTCTTCCEEEEE---ESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEE
T ss_pred CCEEEEECCCccHHHHHHHHcCCCCEEEEE---ECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccE
Confidence 459999999999999999987 3455566 88999999887642 3578888886553 234678999
Q ss_pred EEecccccccc--cC--hHHHHHHHHhcccCCcEEEEEe
Q 006662 286 AHCSRCLIPWG--QY--DGLYLIEVDRVLRPGGYWILSG 320 (636)
Q Consensus 286 V~~s~~L~h~~--~d--~~~~L~el~RvLKPGG~Liis~ 320 (636)
|++.... ++. .+ ...+++++.++|+|||.|++..
T Consensus 198 Ii~d~~~-p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 235 (334)
T 1xj5_A 198 VIVDSSD-PIGPAKELFEKPFFQSVARALRPGGVVCTQA 235 (334)
T ss_dssp EEECCCC-TTSGGGGGGSHHHHHHHHHHEEEEEEEEEEC
T ss_pred EEECCCC-ccCcchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 9986432 221 11 2689999999999999999974
No 215
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=98.75 E-value=4.6e-08 Score=105.16 Aligned_cols=116 Identities=14% Similarity=0.097 Sum_probs=77.8
Q ss_pred HHHHHHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhcCC-EEEEcCcCCchHHHHHHHHHcCC--CeEEEEeccccCC
Q 006662 201 ADAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNI-LAVSFAPRDTHEAQVQFALERGV--PALIGVMASIRLP 277 (636)
Q Consensus 201 ~~~~id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~~v-~vv~i~p~Dis~a~l~~A~erg~--~~~~~~~d~~~Lp 277 (636)
.+.|.+.|.+.....+++ +|||||||+|.++...++.|. .+++++..++...+.+.++.++. .+.+...+...+.
T Consensus 68 t~aY~~Ai~~~~~~~~~k--~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~~~~~a~~~~~~n~~~~~i~~i~~~~~~~~ 145 (376)
T 4hc4_A 68 TDAYRLGILRNWAALRGK--TVLDVGAGTGILSIFCAQAGARRVYAVEASAIWQQAREVVRFNGLEDRVHVLPGPVETVE 145 (376)
T ss_dssp HHHHHHHHHTTHHHHTTC--EEEEETCTTSHHHHHHHHTTCSEEEEEECSTTHHHHHHHHHHTTCTTTEEEEESCTTTCC
T ss_pred HHHHHHHHHhCHHhcCCC--EEEEeCCCccHHHHHHHHhCCCEEEEEeChHHHHHHHHHHHHcCCCceEEEEeeeeeeec
Confidence 355655565433333455 899999999999988888863 45555332233334444555554 4788888888887
Q ss_pred CCCCCeeEEEeccccc--ccccChHHHHHHHHhcccCCcEEEEE
Q 006662 278 YPSRAFDMAHCSRCLI--PWGQYDGLYLIEVDRVLRPGGYWILS 319 (636)
Q Consensus 278 f~~~sFDlV~~s~~L~--h~~~d~~~~L~el~RvLKPGG~Liis 319 (636)
++ +.||+|+|...-. ........++....|+|||||.++-+
T Consensus 146 lp-e~~DvivsE~~~~~l~~e~~l~~~l~a~~r~Lkp~G~~iP~ 188 (376)
T 4hc4_A 146 LP-EQVDAIVSEWMGYGLLHESMLSSVLHARTKWLKEGGLLLPA 188 (376)
T ss_dssp CS-SCEEEEECCCCBTTBTTTCSHHHHHHHHHHHEEEEEEEESC
T ss_pred CC-ccccEEEeecccccccccchhhhHHHHHHhhCCCCceECCc
Confidence 77 5799999843221 22223478889999999999998764
No 216
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=98.74 E-value=6.6e-09 Score=103.23 Aligned_cols=97 Identities=11% Similarity=0.191 Sum_probs=75.6
Q ss_pred cceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhhcccchhh-ccccccCCCC-CccceeeeccccccCCC
Q 006662 477 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERGLIGTYQ-NWCEAMSTYP-RTYDLIHADSIFSLYKD 554 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRgli~~~~-~~ce~~~~yp-~t~Dl~H~~~~fs~~~~ 554 (636)
..+|||+|||.|.++.+|++.+. +|+.+|.++.++..+.++ +..+. |..+-..++| .+||+|.+.++|....
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~--~~~~~~d~~~~~~~~~~~~fD~i~~~~~l~~~~- 115 (240)
T 3dli_A 42 CRRVLDIGCGRGEFLELCKEEGI---ESIGVDINEDMIKFCEGK--FNVVKSDAIEYLKSLPDKYLDGVMISHFVEHLD- 115 (240)
T ss_dssp CSCEEEETCTTTHHHHHHHHHTC---CEEEECSCHHHHHHHHTT--SEEECSCHHHHHHTSCTTCBSEEEEESCGGGSC-
T ss_pred CCeEEEEeCCCCHHHHHHHhCCC---cEEEEECCHHHHHHHHhh--cceeeccHHHHhhhcCCCCeeEEEECCchhhCC-
Confidence 57899999999999999988754 456778777899998888 33332 2222233566 8999999988887654
Q ss_pred CcCHHHHHHHHhhcccCCcEEEEEe
Q 006662 555 RCEMEDVLLEMDRILRPEGSVIIRD 579 (636)
Q Consensus 555 ~c~~~~~l~e~dRiLrPgG~~i~~d 579 (636)
.-++..+|-++.|+|||||++++..
T Consensus 116 ~~~~~~~l~~~~~~LkpgG~l~~~~ 140 (240)
T 3dli_A 116 PERLFELLSLCYSKMKYSSYIVIES 140 (240)
T ss_dssp GGGHHHHHHHHHHHBCTTCCEEEEE
T ss_pred cHHHHHHHHHHHHHcCCCcEEEEEe
Confidence 2356899999999999999999974
No 217
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=98.74 E-value=1.6e-08 Score=98.34 Aligned_cols=99 Identities=18% Similarity=0.319 Sum_probs=77.6
Q ss_pred CCcceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhhcc----cchhhccccccCCC--CCccceeeeccc
Q 006662 475 GRYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERGL----IGTYQNWCEAMSTY--PRTYDLIHADSI 548 (636)
Q Consensus 475 ~~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRgl----i~~~~~~ce~~~~y--p~t~Dl~H~~~~ 548 (636)
....+|||+|||.|.++.+|++.. .+|+.+|.++.++..+.++.- +..++ ..+..+ +.+||+|.+.++
T Consensus 50 ~~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~---~d~~~~~~~~~fD~v~~~~~ 123 (216)
T 3ofk_A 50 GAVSNGLEIGCAAGAFTEKLAPHC---KRLTVIDVMPRAIGRACQRTKRWSHISWAA---TDILQFSTAELFDLIVVAEV 123 (216)
T ss_dssp SSEEEEEEECCTTSHHHHHHGGGE---EEEEEEESCHHHHHHHHHHTTTCSSEEEEE---CCTTTCCCSCCEEEEEEESC
T ss_pred CCCCcEEEEcCCCCHHHHHHHHcC---CEEEEEECCHHHHHHHHHhcccCCCeEEEE---cchhhCCCCCCccEEEEccH
Confidence 567899999999999999999884 478888888888988888742 22222 222223 489999999988
Q ss_pred cccCCCCcCHHHHHHHHhhcccCCcEEEEEe
Q 006662 549 FSLYKDRCEMEDVLLEMDRILRPEGSVIIRD 579 (636)
Q Consensus 549 fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d 579 (636)
|....+.-.+..+|-++.|+|||||.+++.+
T Consensus 124 l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 154 (216)
T 3ofk_A 124 LYYLEDMTQMRTAIDNMVKMLAPGGHLVFGS 154 (216)
T ss_dssp GGGSSSHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred HHhCCCHHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 8766655455678999999999999999975
No 218
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.74 E-value=1.4e-08 Score=107.65 Aligned_cols=93 Identities=14% Similarity=0.127 Sum_probs=75.0
Q ss_pred cEEEEeCCCCcHHHHHHhhc--CCEEEEcCcCCchHHHHHHHHHcCCCeEEEEeccccCCCCCCCeeEEEeccccccccc
Q 006662 220 RTAIDTGCGVASWGAYLMSR--NILAVSFAPRDTHEAQVQFALERGVPALIGVMASIRLPYPSRAFDMAHCSRCLIPWGQ 297 (636)
Q Consensus 220 r~VLDIGCGtG~~a~~La~~--~v~vv~i~p~Dis~a~l~~A~erg~~~~~~~~d~~~Lpf~~~sFDlV~~s~~L~h~~~ 297 (636)
.+|||||||+|.++..++++ +..++.+ |+ +.+++.+++. ..+.+...|... +++ .||+|++..++++|.
T Consensus 195 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~---D~-~~~~~~a~~~-~~v~~~~~d~~~-~~~--~~D~v~~~~vlh~~~- 265 (358)
T 1zg3_A 195 ESLVDVGGGTGGVTKLIHEIFPHLKCTVF---DQ-PQVVGNLTGN-ENLNFVGGDMFK-SIP--SADAVLLKWVLHDWN- 265 (358)
T ss_dssp SEEEEETCTTSHHHHHHHHHCTTSEEEEE---EC-HHHHSSCCCC-SSEEEEECCTTT-CCC--CCSEEEEESCGGGSC-
T ss_pred CEEEEECCCcCHHHHHHHHHCCCCeEEEe---cc-HHHHhhcccC-CCcEEEeCccCC-CCC--CceEEEEcccccCCC-
Confidence 48999999999999999987 4566666 77 4677666442 347888888766 666 499999999997775
Q ss_pred ChH--HHHHHHHhcccC---CcEEEEEeC
Q 006662 298 YDG--LYLIEVDRVLRP---GGYWILSGP 321 (636)
Q Consensus 298 d~~--~~L~el~RvLKP---GG~Liis~p 321 (636)
++. .+|+++.++||| ||++++..+
T Consensus 266 d~~~~~~l~~~~~~L~p~~~gG~l~i~e~ 294 (358)
T 1zg3_A 266 DEQSLKILKNSKEAISHKGKDGKVIIIDI 294 (358)
T ss_dssp HHHHHHHHHHHHHHTGGGGGGCEEEEEEC
T ss_pred HHHHHHHHHHHHHhCCCCCCCcEEEEEEe
Confidence 554 999999999999 999999864
No 219
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=98.74 E-value=6e-08 Score=96.54 Aligned_cols=94 Identities=14% Similarity=0.128 Sum_probs=72.2
Q ss_pred EEEEeCCCCcHHHHHHhhc---CCEEEEcCcCCchHHHHHHHHHc----CC--CeEEEEecccc----CCCCC--CCeeE
Q 006662 221 TAIDTGCGVASWGAYLMSR---NILAVSFAPRDTHEAQVQFALER----GV--PALIGVMASIR----LPYPS--RAFDM 285 (636)
Q Consensus 221 ~VLDIGCGtG~~a~~La~~---~v~vv~i~p~Dis~a~l~~A~er----g~--~~~~~~~d~~~----Lpf~~--~sFDl 285 (636)
+|||||||+|..+..+++. +..++.+ |+++.+++.|+++ +. .+.+..++... ++..+ ++||+
T Consensus 75 ~vLdiG~G~G~~~~~la~~~~~~~~v~~i---D~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD~ 151 (232)
T 3cbg_A 75 QVLEIGVFRGYSALAMALQLPPDGQIIAC---DQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFDL 151 (232)
T ss_dssp EEEEECCTTSHHHHHHHTTSCTTCEEEEE---ESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEEE
T ss_pred EEEEecCCCCHHHHHHHHhCCCCCEEEEE---ECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcCE
Confidence 8999999999999999986 4566666 8888888888654 33 36777777532 33333 78999
Q ss_pred EEecccccccccChHHHHHHHHhcccCCcEEEEEeC
Q 006662 286 AHCSRCLIPWGQYDGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 286 V~~s~~L~h~~~d~~~~L~el~RvLKPGG~Liis~p 321 (636)
|++... ..+...++.++.++|||||++++...
T Consensus 152 V~~d~~----~~~~~~~l~~~~~~LkpgG~lv~~~~ 183 (232)
T 3cbg_A 152 IFIDAD----KRNYPRYYEIGLNLLRRGGLMVIDNV 183 (232)
T ss_dssp EEECSC----GGGHHHHHHHHHHTEEEEEEEEEECT
T ss_pred EEECCC----HHHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 998653 23447899999999999999999753
No 220
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.73 E-value=8.1e-08 Score=93.44 Aligned_cols=148 Identities=14% Similarity=0.145 Sum_probs=97.8
Q ss_pred hcchhhHHHHHHHHHHHHH------------hhhccCCCCCcceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchH
Q 006662 448 EMFREDTALWKKRVTYYKS------------VDYQLAQPGRYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLG 515 (636)
Q Consensus 448 ~~f~~d~~~w~~~v~~y~~------------~~~~l~~~~~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~ 515 (636)
+.|.++...|......|.. ++..+.......+|||+|||.|.++..|. ..|..+-+.+.
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~-~~v~~~D~s~~-------- 97 (215)
T 2zfu_A 27 RLFQEDPEAFLLYHRGFQSQVKKWPLQPVDRIARDLRQRPASLVVADFGCGDCRLASSIR-NPVHCFDLASL-------- 97 (215)
T ss_dssp HHHHHCHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHTSCTTSCEEEETCTTCHHHHHCC-SCEEEEESSCS--------
T ss_pred HHHHHhHHHHHHHHHHHHhhhcccchhHHHHHHHHHhccCCCCeEEEECCcCCHHHHHhh-ccEEEEeCCCC--------
Confidence 4466677777765555543 22222211345789999999999999985 44544444332
Q ss_pred HHHhhcccchhh-ccccccCCCC-CccceeeeccccccCCCCcCHHHHHHHHhhcccCCcEEEEEeCHH---HHHHHHHH
Q 006662 516 VIYERGLIGTYQ-NWCEAMSTYP-RTYDLIHADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDDVD---ILVKIKSI 590 (636)
Q Consensus 516 ~~~eRgli~~~~-~~ce~~~~yp-~t~Dl~H~~~~fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~~~---~~~~~~~~ 590 (636)
. +.+.. |. +.+ ++| .+||+|.+..++. . -+...+|.|+.|+|+|||.+++.+... ....+.++
T Consensus 98 -----~-~~~~~~d~-~~~-~~~~~~fD~v~~~~~l~---~-~~~~~~l~~~~~~L~~gG~l~i~~~~~~~~~~~~~~~~ 165 (215)
T 2zfu_A 98 -----D-PRVTVCDM-AQV-PLEDESVDVAVFCLSLM---G-TNIRDFLEEANRVLKPGGLLKVAEVSSRFEDVRTFLRA 165 (215)
T ss_dssp -----S-TTEEESCT-TSC-SCCTTCEEEEEEESCCC---S-SCHHHHHHHHHHHEEEEEEEEEEECGGGCSCHHHHHHH
T ss_pred -----C-ceEEEecc-ccC-CCCCCCEeEEEEehhcc---c-cCHHHHHHHHHHhCCCCeEEEEEEcCCCCCCHHHHHHH
Confidence 1 11111 11 222 344 7999999988773 1 467899999999999999999987554 45778888
Q ss_pred HhcCCCceEEeccCCCCCCcceEEEEEec
Q 006662 591 TDGMEWEGRIADHENGPRQREKILFANKK 619 (636)
Q Consensus 591 ~~~~~W~~~~~~~e~~~~~~~~~l~~~K~ 619 (636)
++...++....+... ..-.+++++|.
T Consensus 166 l~~~Gf~~~~~~~~~---~~~~~~~~~k~ 191 (215)
T 2zfu_A 166 VTKLGFKIVSKDLTN---SHFFLFDFQKT 191 (215)
T ss_dssp HHHTTEEEEEEECCS---TTCEEEEEEEC
T ss_pred HHHCCCEEEEEecCC---CeEEEEEEEec
Confidence 888888876654432 23478888886
No 221
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=98.73 E-value=5e-08 Score=96.04 Aligned_cols=98 Identities=17% Similarity=0.188 Sum_probs=73.4
Q ss_pred CcceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhhc----c-cchhh-ccccccCCCCCccceeeecc-c
Q 006662 476 RYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERG----L-IGTYQ-NWCEAMSTYPRTYDLIHADS-I 548 (636)
Q Consensus 476 ~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRg----l-i~~~~-~~ce~~~~yp~t~Dl~H~~~-~ 548 (636)
...+|||+|||.|.++..|++.+. +++.+|.++.++..+.++- + +..++ |.. .+ +++.+||+|.+.+ +
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~~~---~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~-~~-~~~~~fD~v~~~~~~ 111 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPKFK---NTWAVDLSQEMLSEAENKFRSQGLKPRLACQDIS-NL-NINRKFDLITCCLDS 111 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGGSS---EEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGG-GC-CCSCCEEEEEECTTG
T ss_pred CCCeEEEeCCCCCHHHHHHHHCCC---cEEEEECCHHHHHHHHHHHhhcCCCeEEEecccc-cC-CccCCceEEEEcCcc
Confidence 356899999999999999998854 5677788778888887762 1 22222 221 11 2458999999987 8
Q ss_pred cccCCCCcCHHHHHHHHhhcccCCcEEEEE
Q 006662 549 FSLYKDRCEMEDVLLEMDRILRPEGSVIIR 578 (636)
Q Consensus 549 fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~ 578 (636)
|....+.-+...+|.++-|+|+|||.+++.
T Consensus 112 l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 141 (246)
T 1y8c_A 112 TNYIIDSDDLKKYFKAVSNHLKEGGVFIFD 141 (246)
T ss_dssp GGGCCSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred ccccCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 876544446789999999999999999984
No 222
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=98.73 E-value=8.1e-08 Score=94.38 Aligned_cols=95 Identities=15% Similarity=0.132 Sum_probs=71.1
Q ss_pred cEEEEeCCCCcHHHHHHhhc---CCEEEEcCcCCchHHHHHHHHHc----CC--CeEEEEeccccC-C-CC----CCCee
Q 006662 220 RTAIDTGCGVASWGAYLMSR---NILAVSFAPRDTHEAQVQFALER----GV--PALIGVMASIRL-P-YP----SRAFD 284 (636)
Q Consensus 220 r~VLDIGCGtG~~a~~La~~---~v~vv~i~p~Dis~a~l~~A~er----g~--~~~~~~~d~~~L-p-f~----~~sFD 284 (636)
.+|||||||+|.++..+++. +..++.+ |+++.+++.|+++ +. .+.+..+|.... + +. .++||
T Consensus 71 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~v---D~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D 147 (229)
T 2avd_A 71 KKALDLGTFTGYSALALALALPADGRVVTC---EVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTFD 147 (229)
T ss_dssp CEEEEECCTTSHHHHHHHTTSCTTCEEEEE---ESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCEE
T ss_pred CEEEEEcCCccHHHHHHHHhCCCCCEEEEE---ECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCcc
Confidence 38999999999999999985 4556666 7788888777654 33 577877775432 1 11 16899
Q ss_pred EEEecccccccccChHHHHHHHHhcccCCcEEEEEeC
Q 006662 285 MAHCSRCLIPWGQYDGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 285 lV~~s~~L~h~~~d~~~~L~el~RvLKPGG~Liis~p 321 (636)
+|++... ..+...++.++.++|||||++++...
T Consensus 148 ~v~~d~~----~~~~~~~l~~~~~~L~pgG~lv~~~~ 180 (229)
T 2avd_A 148 VAVVDAD----KENCSAYYERCLQLLRPGGILAVLRV 180 (229)
T ss_dssp EEEECSC----STTHHHHHHHHHHHEEEEEEEEEECC
T ss_pred EEEECCC----HHHHHHHHHHHHHHcCCCeEEEEECC
Confidence 9998643 23447899999999999999999753
No 223
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=98.72 E-value=1.6e-08 Score=96.06 Aligned_cols=139 Identities=12% Similarity=0.049 Sum_probs=89.0
Q ss_pred cceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhh----cc--cchhhccccccCCC-CCccceeeec-cc
Q 006662 477 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GL--IGTYQNWCEAMSTY-PRTYDLIHAD-SI 548 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl--i~~~~~~ce~~~~y-p~t~Dl~H~~-~~ 548 (636)
..+|||+|||.|.++..|++.. -.|+.+|.++.++..+.++ |+ +-..++-.+.+..+ +.+||+|.++ +.
T Consensus 23 ~~~vLDiGcG~G~~~~~la~~~---~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~~~~~ 99 (185)
T 3mti_A 23 ESIVVDATMGNGNDTAFLAGLS---KKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAAIFNLGY 99 (185)
T ss_dssp TCEEEESCCTTSHHHHHHHTTS---SEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEEEEEEEC-
T ss_pred CCEEEEEcCCCCHHHHHHHHhC---CEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCEEEEeCCC
Confidence 5689999999999999999883 4667778887888887665 44 33444333444445 4889999765 33
Q ss_pred cccC-----CCCcCHHHHHHHHhhcccCCcEEEEEeC------HHHHHHHHHHHhcCC---CceEEeccCCCCCCcceEE
Q 006662 549 FSLY-----KDRCEMEDVLLEMDRILRPEGSVIIRDD------VDILVKIKSITDGME---WEGRIADHENGPRQREKIL 614 (636)
Q Consensus 549 fs~~-----~~~c~~~~~l~e~dRiLrPgG~~i~~d~------~~~~~~~~~~~~~~~---W~~~~~~~e~~~~~~~~~l 614 (636)
+... ...-.....|-|+-|+|||||.+++..- .+....+.+.+..+. |.+.....-+....+..++
T Consensus 100 ~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 179 (185)
T 3mti_A 100 LPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYYGHDGGDMEKDAVLEYVIGLDQRVFTAMLYQPLNQINTPPFLV 179 (185)
T ss_dssp ----------CHHHHHHHHHHHHHHEEEEEEEEEEEC------CHHHHHHHHHHHHSCTTTEEEEEEEESSCSSCCCEEE
T ss_pred CCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeCCCCCCHHHHHHHHHHHHhCCCceEEEEEehhhccCCCCCeEE
Confidence 2210 0112234788999999999999999642 234456666666665 6665444333333445555
Q ss_pred EEEe
Q 006662 615 FANK 618 (636)
Q Consensus 615 ~~~K 618 (636)
+..|
T Consensus 180 ~i~~ 183 (185)
T 3mti_A 180 MLEK 183 (185)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 5555
No 224
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=98.72 E-value=2.8e-08 Score=96.53 Aligned_cols=93 Identities=16% Similarity=0.059 Sum_probs=64.9
Q ss_pred cEEEEeCCCCcHHHHHHhhcCCEEEEcCcCCchHHHHHHHHHcCCCeEEEEeccccCCCC-----------CCCeeEEEe
Q 006662 220 RTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALERGVPALIGVMASIRLPYP-----------SRAFDMAHC 288 (636)
Q Consensus 220 r~VLDIGCGtG~~a~~La~~~v~vv~i~p~Dis~a~l~~A~erg~~~~~~~~d~~~Lpf~-----------~~sFDlV~~ 288 (636)
.+|||+|||+|.++..+++++..++++ |+++.. ....+.+.++|....+.. .++||+|+|
T Consensus 27 ~~VLDlG~G~G~~s~~la~~~~~V~gv---D~~~~~------~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~D~Vls 97 (191)
T 3dou_A 27 DAVIEIGSSPGGWTQVLNSLARKIISI---DLQEME------EIAGVRFIRCDIFKETIFDDIDRALREEGIEKVDDVVS 97 (191)
T ss_dssp CEEEEESCTTCHHHHHHTTTCSEEEEE---ESSCCC------CCTTCEEEECCTTSSSHHHHHHHHHHHHTCSSEEEEEE
T ss_pred CEEEEEeecCCHHHHHHHHcCCcEEEE---eccccc------cCCCeEEEEccccCHHHHHHHHHHhhcccCCcceEEec
Confidence 499999999999999999986655555 444321 123578888887765421 148999999
Q ss_pred cccccc---cccC-------hHHHHHHHHhcccCCcEEEEEeC
Q 006662 289 SRCLIP---WGQY-------DGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 289 s~~L~h---~~~d-------~~~~L~el~RvLKPGG~Liis~p 321 (636)
...... +..+ ...++..+.++|||||.|++...
T Consensus 98 d~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~ 140 (191)
T 3dou_A 98 DAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQF 140 (191)
T ss_dssp CCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEc
Confidence 653310 1111 14678889999999999998754
No 225
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=98.72 E-value=1.5e-08 Score=102.10 Aligned_cols=95 Identities=11% Similarity=0.051 Sum_probs=66.6
Q ss_pred cEEEEeCCCCcHHHHHHhhc---CCEEEEcCcCCchHHHHHHHH----HcCC--CeEEEEeccccC-CCC-----CCCee
Q 006662 220 RTAIDTGCGVASWGAYLMSR---NILAVSFAPRDTHEAQVQFAL----ERGV--PALIGVMASIRL-PYP-----SRAFD 284 (636)
Q Consensus 220 r~VLDIGCGtG~~a~~La~~---~v~vv~i~p~Dis~a~l~~A~----erg~--~~~~~~~d~~~L-pf~-----~~sFD 284 (636)
.+|||||||+|..+..|++. +..++++ |+++.+++.|+ +.+. .+.+..+|.... +.. .++||
T Consensus 62 ~~VLDiG~G~G~~t~~la~~~~~~~~v~~i---D~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD 138 (242)
T 3r3h_A 62 KKVLELGTFTGYSALAMSLALPDDGQVITC---DINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFD 138 (242)
T ss_dssp SEEEEEESCCSHHHHHHHHTSCTTCEEEEE---ECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEE
T ss_pred CEEEEeeCCcCHHHHHHHHhCCCCCEEEEE---ECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEe
Confidence 38999999999999999984 3344444 44444433332 3343 578888887543 221 47899
Q ss_pred EEEecccccccccChHHHHHHHHhcccCCcEEEEEeC
Q 006662 285 MAHCSRCLIPWGQYDGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 285 lV~~s~~L~h~~~d~~~~L~el~RvLKPGG~Liis~p 321 (636)
+|++... ..+...++.++.++|||||++++...
T Consensus 139 ~V~~d~~----~~~~~~~l~~~~~~LkpGG~lv~d~~ 171 (242)
T 3r3h_A 139 FIFIDAD----KTNYLNYYELALKLVTPKGLIAIDNI 171 (242)
T ss_dssp EEEEESC----GGGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred EEEEcCC----hHHhHHHHHHHHHhcCCCeEEEEECC
Confidence 9998653 23446799999999999999999743
No 226
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=98.71 E-value=1.9e-08 Score=104.04 Aligned_cols=137 Identities=12% Similarity=0.068 Sum_probs=95.7
Q ss_pred cceEeeecccchhhhhhhc--CCCeEEEEecCCCCCccchHHHHhhc----c---cchhh-ccccccCCCCCccceeeec
Q 006662 477 YRNLLDMNAYLGGFAAALV--DDPLWVMNTVPVEAKINTLGVIYERG----L---IGTYQ-NWCEAMSTYPRTYDLIHAD 546 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~--~~~v~~mnv~~~~~~~~~l~~~~eRg----l---i~~~~-~~ce~~~~yp~t~Dl~H~~ 546 (636)
..+|||+|||.|.++.+|+ ..+- .+|+.+|.++.++..+.++. + +-+++ |..+ .+++.+||+|.++
T Consensus 119 ~~~vLDiGcG~G~~~~~la~~~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~--~~~~~~fD~v~~~ 194 (305)
T 3ocj_A 119 GCVVASVPCGWMSELLALDYSACPG--VQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWK--LDTREGYDLLTSN 194 (305)
T ss_dssp TCEEEETTCTTCHHHHTSCCTTCTT--CEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGG--CCCCSCEEEEECC
T ss_pred CCEEEEecCCCCHHHHHHHHhcCCC--CeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhc--CCccCCeEEEEEC
Confidence 5689999999999999995 3322 35667777778888877653 2 22222 2222 1245999999998
Q ss_pred cccccCCCCcCHHHHHHHHhhcccCCcEEEEEeCH---------------------------------------HHHHHH
Q 006662 547 SIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDDV---------------------------------------DILVKI 587 (636)
Q Consensus 547 ~~fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~~---------------------------------------~~~~~~ 587 (636)
+++....+.-....+|-|+-|+|||||.+++.+-. .....+
T Consensus 195 ~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (305)
T 3ocj_A 195 GLNIYEPDDARVTELYRRFWQALKPGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTRLIQPRWNALRTHAQT 274 (305)
T ss_dssp SSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHHTTCCSCCCCCCHHHH
T ss_pred ChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCCcccccccceeeccccchhhhhhhHHHHHHhhhhhccCCHHHH
Confidence 88776555544456899999999999999998611 135678
Q ss_pred HHHHhcCCCceEEeccCCCCCCcceEEEEEec
Q 006662 588 KSITDGMEWEGRIADHENGPRQREKILFANKK 619 (636)
Q Consensus 588 ~~~~~~~~W~~~~~~~e~~~~~~~~~l~~~K~ 619 (636)
.++++.-.++....... ....-..++++|+
T Consensus 275 ~~~l~~aGF~~v~~~~~--~~~~~~~v~a~Kp 304 (305)
T 3ocj_A 275 RAQLEEAGFTDLRFEDD--RARLFPTVIARKP 304 (305)
T ss_dssp HHHHHHTTCEEEEEECC--TTSSSCEEEEECC
T ss_pred HHHHHHCCCEEEEEEcc--cCceeeEEEEecC
Confidence 88888888887654432 2234568888885
No 227
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=98.71 E-value=7.9e-09 Score=101.76 Aligned_cols=96 Identities=21% Similarity=0.265 Sum_probs=73.0
Q ss_pred cceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhhcc--cchhhccccccCCCCCccceeeeccccccCCC
Q 006662 477 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERGL--IGTYQNWCEAMSTYPRTYDLIHADSIFSLYKD 554 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRgl--i~~~~~~ce~~~~yp~t~Dl~H~~~~fs~~~~ 554 (636)
..+|||+|||.|.++..|++... +|+.+|.++.++..+.++-- +..++.-.+.+ ..+.+||+|++.+++....
T Consensus 43 ~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~v~~~~~d~~~~-~~~~~fD~v~~~~~l~~~~- 117 (250)
T 2p7i_A 43 PGNLLELGSFKGDFTSRLQEHFN---DITCVEASEEAISHAQGRLKDGITYIHSRFEDA-QLPRRYDNIVLTHVLEHID- 117 (250)
T ss_dssp SSCEEEESCTTSHHHHHHTTTCS---CEEEEESCHHHHHHHHHHSCSCEEEEESCGGGC-CCSSCEEEEEEESCGGGCS-
T ss_pred CCcEEEECCCCCHHHHHHHHhCC---cEEEEeCCHHHHHHHHHhhhCCeEEEEccHHHc-CcCCcccEEEEhhHHHhhc-
Confidence 34699999999999999988753 56777888788888888732 22222111222 2348999999988887654
Q ss_pred CcCHHHHHHHHh-hcccCCcEEEEEe
Q 006662 555 RCEMEDVLLEMD-RILRPEGSVIIRD 579 (636)
Q Consensus 555 ~c~~~~~l~e~d-RiLrPgG~~i~~d 579 (636)
+.+.+|.|+. |+|||||++++.+
T Consensus 118 --~~~~~l~~~~~~~LkpgG~l~i~~ 141 (250)
T 2p7i_A 118 --DPVALLKRINDDWLAEGGRLFLVC 141 (250)
T ss_dssp --SHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred --CHHHHHHHHHHHhcCCCCEEEEEc
Confidence 4589999999 9999999999986
No 228
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=98.71 E-value=3.5e-08 Score=103.69 Aligned_cols=97 Identities=12% Similarity=0.092 Sum_probs=74.9
Q ss_pred cEEEEeCCCCcHHHHHHhhc--CCEEEEcCcCCchHHHHHHHHHcC-----CCeEEEEeccccC--CCCCCCeeEEEecc
Q 006662 220 RTAIDTGCGVASWGAYLMSR--NILAVSFAPRDTHEAQVQFALERG-----VPALIGVMASIRL--PYPSRAFDMAHCSR 290 (636)
Q Consensus 220 r~VLDIGCGtG~~a~~La~~--~v~vv~i~p~Dis~a~l~~A~erg-----~~~~~~~~d~~~L--pf~~~sFDlV~~s~ 290 (636)
.+|||||||+|.++.+++++ ++.++.+ |+++.+++.|+++. ..+.+...|.... .+++++||+|++..
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~v~~V---Eidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~ 167 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSRNTVV---ELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRDV 167 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCEEEEE---ESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEECC
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcEEEEE---ECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEECC
Confidence 48999999999999999984 5555555 88999999998763 3478888886553 34568999999854
Q ss_pred cccccc-cC---hHHHHHHHHhcccCCcEEEEEe
Q 006662 291 CLIPWG-QY---DGLYLIEVDRVLRPGGYWILSG 320 (636)
Q Consensus 291 ~L~h~~-~d---~~~~L~el~RvLKPGG~Liis~ 320 (636)
.. +.. .. ...+++++.++|+|||+|++..
T Consensus 168 ~~-~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~ 200 (317)
T 3gjy_A 168 FA-GAITPQNFTTVEFFEHCHRGLAPGGLYVANC 200 (317)
T ss_dssp ST-TSCCCGGGSBHHHHHHHHHHEEEEEEEEEEE
T ss_pred CC-ccccchhhhHHHHHHHHHHhcCCCcEEEEEe
Confidence 33 221 11 2689999999999999999875
No 229
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.71 E-value=1.6e-08 Score=104.43 Aligned_cols=107 Identities=17% Similarity=0.116 Sum_probs=78.7
Q ss_pred HHHHHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhcCCEEEEcCcCCchHHHHHHHHHcC------CCeEEEEecccc
Q 006662 202 DAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALERG------VPALIGVMASIR 275 (636)
Q Consensus 202 ~~~id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~~v~vv~i~p~Dis~a~l~~A~erg------~~~~~~~~d~~~ 275 (636)
...++.+.+.+...++. +|||||||+|.++..|++++..++++ |+++.+++.++++. .++.+..+|...
T Consensus 14 ~~i~~~i~~~~~~~~~~--~VLDiG~G~G~lt~~L~~~~~~v~~v---D~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~ 88 (285)
T 1zq9_A 14 PLIINSIIDKAALRPTD--VVLEVGPGTGNMTVKLLEKAKKVVAC---ELDPRLVAELHKRVQGTPVASKLQVLVGDVLK 88 (285)
T ss_dssp HHHHHHHHHHTCCCTTC--EEEEECCTTSTTHHHHHHHSSEEEEE---ESCHHHHHHHHHHHTTSTTGGGEEEEESCTTT
T ss_pred HHHHHHHHHhcCCCCCC--EEEEEcCcccHHHHHHHhhCCEEEEE---ECCHHHHHHHHHHHHhcCCCCceEEEEcceec
Confidence 34566777777665555 99999999999999999988777777 88999998887652 257888888887
Q ss_pred CCCCCCCeeEEEecccccccccCh-HHHH--------------HHH--HhcccCCcEE
Q 006662 276 LPYPSRAFDMAHCSRCLIPWGQYD-GLYL--------------IEV--DRVLRPGGYW 316 (636)
Q Consensus 276 Lpf~~~sFDlV~~s~~L~h~~~d~-~~~L--------------~el--~RvLKPGG~L 316 (636)
++++ +||+|+++..+ ++.... ..++ +|+ .++|+|||.+
T Consensus 89 ~~~~--~fD~vv~nlpy-~~~~~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~ 143 (285)
T 1zq9_A 89 TDLP--FFDTCVANLPY-QISSPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKL 143 (285)
T ss_dssp SCCC--CCSEEEEECCG-GGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTT
T ss_pred ccch--hhcEEEEecCc-ccchHHHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCcc
Confidence 7765 79999997655 444221 1222 233 3688999876
No 230
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=98.70 E-value=4.4e-08 Score=100.28 Aligned_cols=108 Identities=12% Similarity=-0.002 Sum_probs=79.4
Q ss_pred HHhhccCCCCCcEEEEeCCCCcHHHHHHhhc--C-CEEEEcCcCCchHHHHHHHHHc----CC-CeEEEEeccccCCC--
Q 006662 209 GKLINLKDGSIRTAIDTGCGVASWGAYLMSR--N-ILAVSFAPRDTHEAQVQFALER----GV-PALIGVMASIRLPY-- 278 (636)
Q Consensus 209 ~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~--~-v~vv~i~p~Dis~a~l~~A~er----g~-~~~~~~~d~~~Lpf-- 278 (636)
..++...++. +|||+|||+|..+..+++. + ..++++ |+++.+++.++++ +. ++.+...|...++.
T Consensus 76 ~~~l~~~~g~--~VLDlgaG~G~~t~~la~~~~~~~~v~av---D~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~ 150 (274)
T 3ajd_A 76 PIVLNPREDD--FILDMCAAPGGKTTHLAQLMKNKGTIVAV---EISKTRTKALKSNINRMGVLNTIIINADMRKYKDYL 150 (274)
T ss_dssp HHHHCCCTTC--EEEETTCTTCHHHHHHHHHTTTCSEEEEE---ESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHH
T ss_pred HHHhCCCCcC--EEEEeCCCccHHHHHHHHHcCCCCEEEEE---CCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhh
Confidence 3444445555 9999999999999999974 3 566666 8888888877654 44 57888888776654
Q ss_pred --CCCCeeEEEeccccc-----------------ccccChHHHHHHHHhcccCCcEEEEEeC
Q 006662 279 --PSRAFDMAHCSRCLI-----------------PWGQYDGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 279 --~~~sFDlV~~s~~L~-----------------h~~~d~~~~L~el~RvLKPGG~Liis~p 321 (636)
..++||+|++..... ........++.++.++|||||++++++.
T Consensus 151 ~~~~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stc 212 (274)
T 3ajd_A 151 LKNEIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTC 212 (274)
T ss_dssp HHTTCCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEES
T ss_pred hhccccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEEC
Confidence 367899999852111 1123447899999999999999999875
No 231
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=98.70 E-value=7.9e-09 Score=102.86 Aligned_cols=130 Identities=16% Similarity=0.124 Sum_probs=90.8
Q ss_pred HhhhccCCCCCcceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhhc----ccchhh-ccccccCCCC-Cc
Q 006662 466 SVDYQLAQPGRYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERG----LIGTYQ-NWCEAMSTYP-RT 539 (636)
Q Consensus 466 ~~~~~l~~~~~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRg----li~~~~-~~ce~~~~yp-~t 539 (636)
.++..+.. ....+|||+|||.|.++.+|++.. ..+|+.+|.++.++..+.++- -+-.++ |+. .+ ++| .+
T Consensus 84 ~~l~~l~~-~~~~~vLDiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~-~~-~~~~~~ 158 (254)
T 1xtp_A 84 NFIASLPG-HGTSRALDCGAGIGRITKNLLTKL--YATTDLLEPVKHMLEEAKRELAGMPVGKFILASME-TA-TLPPNT 158 (254)
T ss_dssp HHHHTSTT-CCCSEEEEETCTTTHHHHHTHHHH--CSEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGG-GC-CCCSSC
T ss_pred HHHHhhcc-cCCCEEEEECCCcCHHHHHHHHhh--cCEEEEEeCCHHHHHHHHHHhccCCceEEEEccHH-HC-CCCCCC
Confidence 33444443 457899999999999999998764 234666677778888888773 223332 322 22 344 89
Q ss_pred cceeeeccccccCCCCcCHHHHHHHHhhcccCCcEEEEEeCH----------------HHHHHHHHHHhcCCCceEEe
Q 006662 540 YDLIHADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDDV----------------DILVKIKSITDGMEWEGRIA 601 (636)
Q Consensus 540 ~Dl~H~~~~fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~~----------------~~~~~~~~~~~~~~W~~~~~ 601 (636)
||+|.+.+++..... -+...+|.++.|+|||||+++|.+.. -....++++++...++....
T Consensus 159 fD~v~~~~~l~~~~~-~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~ 235 (254)
T 1xtp_A 159 YDLIVIQWTAIYLTD-ADFVKFFKHCQQALTPNGYIFFKENCSTGDRFLVDKEDSSLTRSDIHYKRLFNESGVRVVKE 235 (254)
T ss_dssp EEEEEEESCGGGSCH-HHHHHHHHHHHHHEEEEEEEEEEEEBC--CCEEEETTTTEEEBCHHHHHHHHHHHTCCEEEE
T ss_pred eEEEEEcchhhhCCH-HHHHHHHHHHHHhcCCCeEEEEEecCCCcccceecccCCcccCCHHHHHHHHHHCCCEEEEe
Confidence 999999888775532 24679999999999999999998731 02366777777777776644
No 232
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=98.70 E-value=2.8e-08 Score=95.96 Aligned_cols=94 Identities=17% Similarity=0.242 Sum_probs=72.3
Q ss_pred eEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhh----cc---cchhh-ccccccCCCC-Cccceeeecccc
Q 006662 479 NLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GL---IGTYQ-NWCEAMSTYP-RTYDLIHADSIF 549 (636)
Q Consensus 479 ~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl---i~~~~-~~ce~~~~yp-~t~Dl~H~~~~f 549 (636)
+|||+|||.|.++..|++.+ ..+|+.+|.++.++..+.++ |+ +..++ |. +.+ ++| .+||+|.+.+++
T Consensus 46 ~vLdiG~G~G~~~~~l~~~~--~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~-~~~-~~~~~~~D~v~~~~~l 121 (219)
T 3dlc_A 46 TCIDIGSGPGALSIALAKQS--DFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDV-HNI-PIEDNYADLIVSRGSV 121 (219)
T ss_dssp EEEEETCTTSHHHHHHHHHS--EEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBT-TBC-SSCTTCEEEEEEESCG
T ss_pred EEEEECCCCCHHHHHHHHcC--CCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCH-HHC-CCCcccccEEEECchH
Confidence 99999999999999998873 24677778877888888777 44 22222 22 222 244 899999998887
Q ss_pred ccCCCCcCHHHHHHHHhhcccCCcEEEEEe
Q 006662 550 SLYKDRCEMEDVLLEMDRILRPEGSVIIRD 579 (636)
Q Consensus 550 s~~~~~c~~~~~l~e~dRiLrPgG~~i~~d 579 (636)
... -+...+|-|+-|+|||||.+++.+
T Consensus 122 ~~~---~~~~~~l~~~~~~L~pgG~l~~~~ 148 (219)
T 3dlc_A 122 FFW---EDVATAFREIYRILKSGGKTYIGG 148 (219)
T ss_dssp GGC---SCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhc---cCHHHHHHHHHHhCCCCCEEEEEe
Confidence 765 356899999999999999999975
No 233
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=98.69 E-value=4e-08 Score=102.88 Aligned_cols=98 Identities=16% Similarity=0.104 Sum_probs=75.0
Q ss_pred CcEEEEeCCCCcHHHHHHhhc--CCEEEEcCcCCchHHHHHHHHHcC----------CCeEEEEecccc-CCCCCCCeeE
Q 006662 219 IRTAIDTGCGVASWGAYLMSR--NILAVSFAPRDTHEAQVQFALERG----------VPALIGVMASIR-LPYPSRAFDM 285 (636)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~--~v~vv~i~p~Dis~a~l~~A~erg----------~~~~~~~~d~~~-Lpf~~~sFDl 285 (636)
..+|||||||+|.++..++++ ...++.+ |+++.+++.|+++. ..+.+..+|... ++..+++||+
T Consensus 78 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~v---Did~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~ 154 (314)
T 1uir_A 78 PKRVLIVGGGEGATLREVLKHPTVEKAVMV---DIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDV 154 (314)
T ss_dssp CCEEEEEECTTSHHHHHHTTSTTCCEEEEE---ESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEE
T ss_pred CCeEEEEcCCcCHHHHHHHhcCCCCEEEEE---ECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccE
Confidence 359999999999999999987 3455555 88889988887542 357888888755 3445678999
Q ss_pred EEeccccccc---cc--C--hHHHHHHHHhcccCCcEEEEEe
Q 006662 286 AHCSRCLIPW---GQ--Y--DGLYLIEVDRVLRPGGYWILSG 320 (636)
Q Consensus 286 V~~s~~L~h~---~~--d--~~~~L~el~RvLKPGG~Liis~ 320 (636)
|++.... ++ .+ . ...+++++.++|||||.+++..
T Consensus 155 Ii~d~~~-~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 195 (314)
T 1uir_A 155 VIIDLTD-PVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQT 195 (314)
T ss_dssp EEEECCC-CBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEECCCC-cccccCcchhccHHHHHHHHHHhcCCCcEEEEEc
Confidence 9997554 44 11 1 2689999999999999999974
No 234
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.69 E-value=6e-08 Score=101.97 Aligned_cols=99 Identities=12% Similarity=0.082 Sum_probs=74.5
Q ss_pred CcEEEEeCCCCcHHHHHHhhc--CCEEEEcCcCCchHHHHHHHHHcC---------CCeEEEEecccc-CCCCCCCeeEE
Q 006662 219 IRTAIDTGCGVASWGAYLMSR--NILAVSFAPRDTHEAQVQFALERG---------VPALIGVMASIR-LPYPSRAFDMA 286 (636)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~--~v~vv~i~p~Dis~a~l~~A~erg---------~~~~~~~~d~~~-Lpf~~~sFDlV 286 (636)
+.+|||||||+|.++..+++. ...++.+ |+++.+++.|+++. ..+.+...|... ++..+++||+|
T Consensus 117 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~v---Dis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvI 193 (321)
T 2pt6_A 117 PKNVLVVGGGDGGIIRELCKYKSVENIDIC---EIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVI 193 (321)
T ss_dssp CCEEEEEECTTCHHHHHHTTCTTCCEEEEE---ESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEE
T ss_pred CCEEEEEcCCccHHHHHHHHcCCCCEEEEE---ECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEE
Confidence 358999999999999999987 3455556 88999999998653 247778777654 23345789999
Q ss_pred EecccccccccC--h--HHHHHHHHhcccCCcEEEEEeC
Q 006662 287 HCSRCLIPWGQY--D--GLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 287 ~~s~~L~h~~~d--~--~~~L~el~RvLKPGG~Liis~p 321 (636)
++... .++... . ..+++++.++|||||.+++...
T Consensus 194 i~d~~-~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 231 (321)
T 2pt6_A 194 IVDSS-DPIGPAETLFNQNFYEKIYNALKPNGYCVAQCE 231 (321)
T ss_dssp EEECC-CSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EECCc-CCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 98643 233211 1 6899999999999999999753
No 235
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=98.69 E-value=5.3e-08 Score=100.08 Aligned_cols=98 Identities=10% Similarity=0.128 Sum_probs=74.8
Q ss_pred CcEEEEeCCCCcHHHHHHhhc-C-CEEEEcCcCCchHHHHHHHHHcC---------CCeEEEEecccc-CCCCCCCeeEE
Q 006662 219 IRTAIDTGCGVASWGAYLMSR-N-ILAVSFAPRDTHEAQVQFALERG---------VPALIGVMASIR-LPYPSRAFDMA 286 (636)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~-~-v~vv~i~p~Dis~a~l~~A~erg---------~~~~~~~~d~~~-Lpf~~~sFDlV 286 (636)
+.+|||||||+|.++.+++++ + ..++.+ |+++.+++.|+++. ..+.+...|... ++..+++||+|
T Consensus 76 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~v---Eid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~I 152 (275)
T 1iy9_A 76 PEHVLVVGGGDGGVIREILKHPSVKKATLV---DIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVI 152 (275)
T ss_dssp CCEEEEESCTTCHHHHHHTTCTTCSEEEEE---ESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEE
T ss_pred CCEEEEECCchHHHHHHHHhCCCCceEEEE---ECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEE
Confidence 459999999999999999987 3 355555 88999999887642 357888888654 34446789999
Q ss_pred EecccccccccC----hHHHHHHHHhcccCCcEEEEEe
Q 006662 287 HCSRCLIPWGQY----DGLYLIEVDRVLRPGGYWILSG 320 (636)
Q Consensus 287 ~~s~~L~h~~~d----~~~~L~el~RvLKPGG~Liis~ 320 (636)
++.... ++... ...+++++.++|+|||.+++..
T Consensus 153 i~d~~~-~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~ 189 (275)
T 1iy9_A 153 MVDSTE-PVGPAVNLFTKGFYAGIAKALKEDGIFVAQT 189 (275)
T ss_dssp EESCSS-CCSCCCCCSTTHHHHHHHHHEEEEEEEEEEC
T ss_pred EECCCC-CCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 995443 33221 2579999999999999999985
No 236
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=98.69 E-value=6e-07 Score=86.72 Aligned_cols=93 Identities=8% Similarity=0.014 Sum_probs=71.5
Q ss_pred CcEEEEeCCCCcHHHHHHhhcCC-EEEEcCcCCchHHHHHHHHHcC----CCeEEEEeccccCCCCCCCeeEEEeccccc
Q 006662 219 IRTAIDTGCGVASWGAYLMSRNI-LAVSFAPRDTHEAQVQFALERG----VPALIGVMASIRLPYPSRAFDMAHCSRCLI 293 (636)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~~v-~vv~i~p~Dis~a~l~~A~erg----~~~~~~~~d~~~Lpf~~~sFDlV~~s~~L~ 293 (636)
..+|||+|||+|.++..+++.+. .++++ |+++.+++.++++. .++.+...|...++ ++||+|+++..++
T Consensus 50 ~~~vlD~g~G~G~~~~~l~~~~~~~v~~v---D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~---~~~D~v~~~~p~~ 123 (207)
T 1wy7_A 50 GKVVADLGAGTGVLSYGALLLGAKEVICV---EVDKEAVDVLIENLGEFKGKFKVFIGDVSEFN---SRVDIVIMNPPFG 123 (207)
T ss_dssp TCEEEEETCTTCHHHHHHHHTTCSEEEEE---ESCHHHHHHHHHHTGGGTTSEEEEESCGGGCC---CCCSEEEECCCCS
T ss_pred cCEEEEeeCCCCHHHHHHHHcCCCEEEEE---ECCHHHHHHHHHHHHHcCCCEEEEECchHHcC---CCCCEEEEcCCCc
Confidence 34999999999999999998854 46666 88999999887653 36788888887764 4899999988775
Q ss_pred ccccCh-HHHHHHHHhcccCCcEEEEE
Q 006662 294 PWGQYD-GLYLIEVDRVLRPGGYWILS 319 (636)
Q Consensus 294 h~~~d~-~~~L~el~RvLKPGG~Liis 319 (636)
...... ..++.++.++| ||.+++.
T Consensus 124 ~~~~~~~~~~l~~~~~~l--~~~~~~~ 148 (207)
T 1wy7_A 124 SQRKHADRPFLLKAFEIS--DVVYSIH 148 (207)
T ss_dssp SSSTTTTHHHHHHHHHHC--SEEEEEE
T ss_pred cccCCchHHHHHHHHHhc--CcEEEEE
Confidence 544222 67899999998 5554443
No 237
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=98.68 E-value=1e-07 Score=99.02 Aligned_cols=99 Identities=11% Similarity=0.051 Sum_probs=72.7
Q ss_pred CcEEEEeCCCCcHHHHHHhhc-C-CEEEEcCcCCchHHHHHHHHHcC---------CCeEEEEecccc-CCCCCCCeeEE
Q 006662 219 IRTAIDTGCGVASWGAYLMSR-N-ILAVSFAPRDTHEAQVQFALERG---------VPALIGVMASIR-LPYPSRAFDMA 286 (636)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~-~-v~vv~i~p~Dis~a~l~~A~erg---------~~~~~~~~d~~~-Lpf~~~sFDlV 286 (636)
..+|||||||+|.++..++++ + ..++.+ |+++.+++.|+++. ..+.+...|... ++..+++||+|
T Consensus 91 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~v---Did~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 167 (296)
T 1inl_A 91 PKKVLIIGGGDGGTLREVLKHDSVEKAILC---EVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVI 167 (296)
T ss_dssp CCEEEEEECTTCHHHHHHTTSTTCSEEEEE---ESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEE
T ss_pred CCEEEEEcCCcCHHHHHHHhcCCCCEEEEE---ECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEE
Confidence 359999999999999999987 2 455555 88889998887642 357888887654 34446789999
Q ss_pred Eeccccccccc-----ChHHHHHHHHhcccCCcEEEEEeC
Q 006662 287 HCSRCLIPWGQ-----YDGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 287 ~~s~~L~h~~~-----d~~~~L~el~RvLKPGG~Liis~p 321 (636)
++...- ++.. ....+++++.++|+|||.+++...
T Consensus 168 i~d~~~-~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 206 (296)
T 1inl_A 168 IIDSTD-PTAGQGGHLFTEEFYQACYDALKEDGVFSAETE 206 (296)
T ss_dssp EEEC-----------CCSHHHHHHHHHHEEEEEEEEEECC
T ss_pred EEcCCC-cccCchhhhhHHHHHHHHHHhcCCCcEEEEEcc
Confidence 985322 3111 126899999999999999999853
No 238
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=98.68 E-value=4.2e-08 Score=102.40 Aligned_cols=98 Identities=16% Similarity=0.152 Sum_probs=72.7
Q ss_pred CcEEEEeCCCCcHHHHHHhhcC--CEEEEcCcCCchHHHHHHHHHc---------CCCeEEEEecccc-CCCCCCCeeEE
Q 006662 219 IRTAIDTGCGVASWGAYLMSRN--ILAVSFAPRDTHEAQVQFALER---------GVPALIGVMASIR-LPYPSRAFDMA 286 (636)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~~--v~vv~i~p~Dis~a~l~~A~er---------g~~~~~~~~d~~~-Lpf~~~sFDlV 286 (636)
..+|||||||+|.++..++++. ..++.+ |+++.+++.|+++ ...+.+...|... ++..+++||+|
T Consensus 96 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~v---Did~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~I 172 (304)
T 2o07_A 96 PRKVLIIGGGDGGVLREVVKHPSVESVVQC---EIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVI 172 (304)
T ss_dssp CCEEEEEECTTSHHHHHHTTCTTCCEEEEE---ESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEE
T ss_pred CCEEEEECCCchHHHHHHHHcCCCCEEEEE---ECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEE
Confidence 4599999999999999999873 455555 8899999888764 2357788887654 34456789999
Q ss_pred EecccccccccC----hHHHHHHHHhcccCCcEEEEEe
Q 006662 287 HCSRCLIPWGQY----DGLYLIEVDRVLRPGGYWILSG 320 (636)
Q Consensus 287 ~~s~~L~h~~~d----~~~~L~el~RvLKPGG~Liis~ 320 (636)
++.... ++.+. ...+++++.++|+|||.+++..
T Consensus 173 i~d~~~-~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 209 (304)
T 2o07_A 173 ITDSSD-PMGPAESLFKESYYQLMKTALKEDGVLCCQG 209 (304)
T ss_dssp EEECC------------CHHHHHHHHHEEEEEEEEEEE
T ss_pred EECCCC-CCCcchhhhHHHHHHHHHhccCCCeEEEEec
Confidence 985433 33211 1468999999999999999975
No 239
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=98.68 E-value=1.2e-08 Score=110.15 Aligned_cols=144 Identities=11% Similarity=0.158 Sum_probs=105.9
Q ss_pred chhhHHHHHHHHHHHHH-hhhccCCCCCcceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhhcccchhhc
Q 006662 450 FREDTALWKKRVTYYKS-VDYQLAQPGRYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERGLIGTYQN 528 (636)
Q Consensus 450 f~~d~~~w~~~v~~y~~-~~~~l~~~~~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRgli~~~~~ 528 (636)
+...+..|.++...+.. ++..+.. ....+|||+|||.|.++.+|.+.+. +|+.+|.+.+++..+.++|+-.....
T Consensus 81 ~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~VLDiGcG~G~~~~~l~~~g~---~v~gvD~s~~~~~~a~~~~~~~~~~~ 156 (416)
T 4e2x_A 81 HSSGSSVMREHFAMLARDFLATELT-GPDPFIVEIGCNDGIMLRTIQEAGV---RHLGFEPSSGVAAKAREKGIRVRTDF 156 (416)
T ss_dssp CGGGCHHHHHHHHHHHHHHHHTTTC-SSSCEEEEETCTTTTTHHHHHHTTC---EEEEECCCHHHHHHHHTTTCCEECSC
T ss_pred cCcCCHHHHHHHHHHHHHHHHHhCC-CCCCEEEEecCCCCHHHHHHHHcCC---cEEEECCCHHHHHHHHHcCCCcceee
Confidence 44556678888776654 3344444 4567999999999999999998865 77888888899999999987332211
Q ss_pred c----ccccCCCC-CccceeeeccccccCCCCcCHHHHHHHHhhcccCCcEEEEEeCH----------H----------H
Q 006662 529 W----CEAMSTYP-RTYDLIHADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDDV----------D----------I 583 (636)
Q Consensus 529 ~----ce~~~~yp-~t~Dl~H~~~~fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~~----------~----------~ 583 (636)
+ .+.+ +++ .+||+|.+.++|.... +...+|-|+.|+|||||.+++.... + .
T Consensus 157 ~~~~~~~~l-~~~~~~fD~I~~~~vl~h~~---d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~s 232 (416)
T 4e2x_A 157 FEKATADDV-RRTEGPANVIYAANTLCHIP---YVQSVLEGVDALLAPDGVFVFEDPYLGDIVAKTSFDQIFDEHFFLFS 232 (416)
T ss_dssp CSHHHHHHH-HHHHCCEEEEEEESCGGGCT---THHHHHHHHHHHEEEEEEEEEEEECHHHHHHHTCGGGCSTTCCEECC
T ss_pred echhhHhhc-ccCCCCEEEEEECChHHhcC---CHHHHHHHHHHHcCCCeEEEEEeCChHHhhhhcchhhhhhhhhhcCC
Confidence 1 1112 243 8999999999988665 6799999999999999999997431 0 2
Q ss_pred HHHHHHHHhcCCCceEEe
Q 006662 584 LVKIKSITDGMEWEGRIA 601 (636)
Q Consensus 584 ~~~~~~~~~~~~W~~~~~ 601 (636)
...+++++++-.+++...
T Consensus 233 ~~~l~~ll~~aGf~~~~~ 250 (416)
T 4e2x_A 233 ATSVQGMAQRCGFELVDV 250 (416)
T ss_dssp HHHHHHHHHHTTEEEEEE
T ss_pred HHHHHHHHHHcCCEEEEE
Confidence 257788888877776543
No 240
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=98.68 E-value=2.9e-08 Score=100.19 Aligned_cols=94 Identities=10% Similarity=0.058 Sum_probs=72.2
Q ss_pred cEEEEeCCCCcHHHHHHhhc---CCEEEEcCcCCchHHHHHHHHHc----CC--CeEEEEeccccC-C-C-----CCCCe
Q 006662 220 RTAIDTGCGVASWGAYLMSR---NILAVSFAPRDTHEAQVQFALER----GV--PALIGVMASIRL-P-Y-----PSRAF 283 (636)
Q Consensus 220 r~VLDIGCGtG~~a~~La~~---~v~vv~i~p~Dis~a~l~~A~er----g~--~~~~~~~d~~~L-p-f-----~~~sF 283 (636)
.+|||||||+|..+..+++. +..++.+ |+++.+++.|+++ +. .+.+..++.... + + ++++|
T Consensus 81 ~~VLeiG~G~G~~~~~la~~~~~~~~v~~i---D~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~f 157 (247)
T 1sui_A 81 KNTMEIGVYTGYSLLATALAIPEDGKILAM---DINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSY 157 (247)
T ss_dssp CEEEEECCGGGHHHHHHHHHSCTTCEEEEE---ESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCB
T ss_pred CEEEEeCCCcCHHHHHHHHhCCCCCEEEEE---ECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCCE
Confidence 38999999999999999986 5566666 7788888877653 33 467777776542 3 2 25789
Q ss_pred eEEEecccccccccChHHHHHHHHhcccCCcEEEEEe
Q 006662 284 DMAHCSRCLIPWGQYDGLYLIEVDRVLRPGGYWILSG 320 (636)
Q Consensus 284 DlV~~s~~L~h~~~d~~~~L~el~RvLKPGG~Liis~ 320 (636)
|+|++... ..+...++.++.++|||||++++..
T Consensus 158 D~V~~d~~----~~~~~~~l~~~~~~LkpGG~lv~d~ 190 (247)
T 1sui_A 158 DFIFVDAD----KDNYLNYHKRLIDLVKVGGVIGYDN 190 (247)
T ss_dssp SEEEECSC----STTHHHHHHHHHHHBCTTCCEEEEC
T ss_pred EEEEEcCc----hHHHHHHHHHHHHhCCCCeEEEEec
Confidence 99998643 2355789999999999999999874
No 241
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=98.68 E-value=2.8e-08 Score=102.95 Aligned_cols=101 Identities=14% Similarity=0.145 Sum_probs=76.2
Q ss_pred CCcceEeeecccchhhhhhhcCC-CeEEEEecCCCCCccchHHHHhh----cccchhhccccccCCCCCccceeeecccc
Q 006662 475 GRYRNLLDMNAYLGGFAAALVDD-PLWVMNTVPVEAKINTLGVIYER----GLIGTYQNWCEAMSTYPRTYDLIHADSIF 549 (636)
Q Consensus 475 ~~~r~vlD~~~g~ggfaa~l~~~-~v~~mnv~~~~~~~~~l~~~~eR----gli~~~~~~ce~~~~yp~t~Dl~H~~~~f 549 (636)
....+|||+|||.|.++..|++. +. +|+.+|.++.++..+.++ |+-..+.-.+..+..+|.+||+|.+.++|
T Consensus 89 ~~~~~vLDiGcG~G~~~~~la~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~fD~v~~~~~l 165 (318)
T 2fk8_A 89 KPGMTLLDIGCGWGTTMRRAVERFDV---NVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFAEPVDRIVSIEAF 165 (318)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCC---EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCCCCCSEEEEESCG
T ss_pred CCcCEEEEEcccchHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCCCCcCEEEEeChH
Confidence 34668999999999999999876 54 667777777888888877 44221222223344557999999998887
Q ss_pred ccCCCCcCHHHHHHHHhhcccCCcEEEEEe
Q 006662 550 SLYKDRCEMEDVLLEMDRILRPEGSVIIRD 579 (636)
Q Consensus 550 s~~~~~c~~~~~l~e~dRiLrPgG~~i~~d 579 (636)
..... -+...+|-|+-|+|||||.+++.+
T Consensus 166 ~~~~~-~~~~~~l~~~~~~LkpgG~l~~~~ 194 (318)
T 2fk8_A 166 EHFGH-ENYDDFFKRCFNIMPADGRMTVQS 194 (318)
T ss_dssp GGTCG-GGHHHHHHHHHHHSCTTCEEEEEE
T ss_pred HhcCH-HHHHHHHHHHHHhcCCCcEEEEEE
Confidence 75432 356899999999999999999975
No 242
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=98.67 E-value=1e-08 Score=104.51 Aligned_cols=94 Identities=14% Similarity=0.112 Sum_probs=71.4
Q ss_pred cceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhhcccchhhccccccCCCC-CccceeeeccccccCCCC
Q 006662 477 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERGLIGTYQNWCEAMSTYP-RTYDLIHADSIFSLYKDR 555 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRgli~~~~~~ce~~~~yp-~t~Dl~H~~~~fs~~~~~ 555 (636)
-.+|||+|||+|.++..|+++.- +|+.+|.++.++..+.++.-+...+.=.|.++ +| .+||+|.|..+|..
T Consensus 40 ~~~vLDvGcGtG~~~~~l~~~~~---~v~gvD~s~~ml~~a~~~~~v~~~~~~~e~~~-~~~~sfD~v~~~~~~h~---- 111 (257)
T 4hg2_A 40 RGDALDCGCGSGQASLGLAEFFE---RVHAVDPGEAQIRQALRHPRVTYAVAPAEDTG-LPPASVDVAIAAQAMHW---- 111 (257)
T ss_dssp SSEEEEESCTTTTTHHHHHTTCS---EEEEEESCHHHHHTCCCCTTEEEEECCTTCCC-CCSSCEEEEEECSCCTT----
T ss_pred CCCEEEEcCCCCHHHHHHHHhCC---EEEEEeCcHHhhhhhhhcCCceeehhhhhhhc-ccCCcccEEEEeeehhH----
Confidence 35799999999999999998853 66777888788877766543443332224443 54 89999999777732
Q ss_pred cCHHHHHHHHhhcccCCcEEEEE
Q 006662 556 CEMEDVLLEMDRILRPEGSVIIR 578 (636)
Q Consensus 556 c~~~~~l~e~dRiLrPgG~~i~~ 578 (636)
.+.+..+.|+.|||||||.+++-
T Consensus 112 ~~~~~~~~e~~rvLkpgG~l~~~ 134 (257)
T 4hg2_A 112 FDLDRFWAELRRVARPGAVFAAV 134 (257)
T ss_dssp CCHHHHHHHHHHHEEEEEEEEEE
T ss_pred hhHHHHHHHHHHHcCCCCEEEEE
Confidence 46789999999999999999875
No 243
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=98.67 E-value=1.5e-08 Score=98.08 Aligned_cols=100 Identities=14% Similarity=0.142 Sum_probs=74.2
Q ss_pred cceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhhcccchhhccccccCCCC-CccceeeeccccccCCCC
Q 006662 477 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERGLIGTYQNWCEAMSTYP-RTYDLIHADSIFSLYKDR 555 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRgli~~~~~~ce~~~~yp-~t~Dl~H~~~~fs~~~~~ 555 (636)
..+|||+|||.|.++.+|++.+. +|+.+|.++.++..+.++|+..+--.-+.....+| .+||+|.+.+++....+
T Consensus 47 ~~~vLdiG~G~G~~~~~l~~~~~---~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~l~~~~~- 122 (218)
T 3ou2_A 47 RGDVLELASGTGYWTRHLSGLAD---RVTALDGSAEMIAEAGRHGLDNVEFRQQDLFDWTPDRQWDAVFFAHWLAHVPD- 122 (218)
T ss_dssp CSEEEEESCTTSHHHHHHHHHSS---EEEEEESCHHHHHHHGGGCCTTEEEEECCTTSCCCSSCEEEEEEESCGGGSCH-
T ss_pred CCeEEEECCCCCHHHHHHHhcCC---eEEEEeCCHHHHHHHHhcCCCCeEEEecccccCCCCCceeEEEEechhhcCCH-
Confidence 45999999999999999988744 56677777789999998775221111111222244 89999999887775543
Q ss_pred cCHHHHHHHHhhcccCCcEEEEEeC
Q 006662 556 CEMEDVLLEMDRILRPEGSVIIRDD 580 (636)
Q Consensus 556 c~~~~~l~e~dRiLrPgG~~i~~d~ 580 (636)
-.+..+|-++-|+|||||.+++.+.
T Consensus 123 ~~~~~~l~~~~~~L~pgG~l~~~~~ 147 (218)
T 3ou2_A 123 DRFEAFWESVRSAVAPGGVVEFVDV 147 (218)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 2357899999999999999999853
No 244
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=98.67 E-value=2.6e-07 Score=98.79 Aligned_cols=96 Identities=14% Similarity=-0.045 Sum_probs=75.7
Q ss_pred CcEEEEeCCCCcHHHHHHhhcC--CEEEEcCcCCchHHHHHHHHHc----CC-CeEEEEecccc-CCC-CCCCeeEEEec
Q 006662 219 IRTAIDTGCGVASWGAYLMSRN--ILAVSFAPRDTHEAQVQFALER----GV-PALIGVMASIR-LPY-PSRAFDMAHCS 289 (636)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~~--v~vv~i~p~Dis~a~l~~A~er----g~-~~~~~~~d~~~-Lpf-~~~sFDlV~~s 289 (636)
+.+|||+| |+|.++..++..+ ..++.+ |+++.+++.|+++ +. ++.+..+|... +|. .+++||+|+++
T Consensus 173 ~~~VLDlG-G~G~~~~~la~~~~~~~v~~v---Di~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~~~~~~fD~Vi~~ 248 (373)
T 2qm3_A 173 NKDIFVLG-DDDLTSIALMLSGLPKRIAVL---DIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPDYALHKFDTFITD 248 (373)
T ss_dssp TCEEEEES-CTTCHHHHHHHHTCCSEEEEE---CSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCTTTSSCBSEEEEC
T ss_pred CCEEEEEC-CCCHHHHHHHHhCCCCEEEEE---ECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchhhccCCccEEEEC
Confidence 35999999 9999999998875 467777 9999999988755 44 68888888877 664 45789999998
Q ss_pred ccccccccChHHHHHHHHhcccCCcE-EEEEe
Q 006662 290 RCLIPWGQYDGLYLIEVDRVLRPGGY-WILSG 320 (636)
Q Consensus 290 ~~L~h~~~d~~~~L~el~RvLKPGG~-Liis~ 320 (636)
..+... ....++.++.++|||||. ++++.
T Consensus 249 ~p~~~~--~~~~~l~~~~~~LkpgG~~~~~~~ 278 (373)
T 2qm3_A 249 PPETLE--AIRAFVGRGIATLKGPRCAGYFGI 278 (373)
T ss_dssp CCSSHH--HHHHHHHHHHHTBCSTTCEEEEEE
T ss_pred CCCchH--HHHHHHHHHHHHcccCCeEEEEEE
Confidence 765332 247899999999999994 46654
No 245
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.67 E-value=3.9e-08 Score=103.19 Aligned_cols=98 Identities=13% Similarity=0.066 Sum_probs=71.2
Q ss_pred CcEEEEeCCCCcHHHHHHhhc--CCEEEEcCcCCchHHHHHHHHHcC---------CCeEEEEecccc-CCCCCCCeeEE
Q 006662 219 IRTAIDTGCGVASWGAYLMSR--NILAVSFAPRDTHEAQVQFALERG---------VPALIGVMASIR-LPYPSRAFDMA 286 (636)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~--~v~vv~i~p~Dis~a~l~~A~erg---------~~~~~~~~d~~~-Lpf~~~sFDlV 286 (636)
..+|||||||+|.++..+++. ...++.+ |+++.+++.|+++. ..+.+...|... ++..+++||+|
T Consensus 109 ~~~VLdIG~G~G~~~~~l~~~~~~~~v~~v---Did~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~I 185 (314)
T 2b2c_A 109 PKRVLIIGGGDGGILREVLKHESVEKVTMC---EIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVI 185 (314)
T ss_dssp CCEEEEESCTTSHHHHHHTTCTTCCEEEEE---CSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEE
T ss_pred CCEEEEEcCCcCHHHHHHHHcCCCCEEEEE---ECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEE
Confidence 358999999999999999987 3455566 99999999998653 246777777654 33356789999
Q ss_pred EecccccccccCh----HHHHHHHHhcccCCcEEEEEe
Q 006662 287 HCSRCLIPWGQYD----GLYLIEVDRVLRPGGYWILSG 320 (636)
Q Consensus 287 ~~s~~L~h~~~d~----~~~L~el~RvLKPGG~Liis~ 320 (636)
++... .++.+.. ..+++++.++|+|||.+++..
T Consensus 186 i~d~~-~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 186 ITDSS-DPVGPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp EECCC--------------HHHHHHHHEEEEEEEEEEC
T ss_pred EEcCC-CCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 98553 2433222 578999999999999999985
No 246
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=98.66 E-value=2.2e-08 Score=100.49 Aligned_cols=97 Identities=18% Similarity=0.230 Sum_probs=73.8
Q ss_pred CCcceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhh----cc--cchhh-ccccccCCCC-Cccceeeec
Q 006662 475 GRYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GL--IGTYQ-NWCEAMSTYP-RTYDLIHAD 546 (636)
Q Consensus 475 ~~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl--i~~~~-~~ce~~~~yp-~t~Dl~H~~ 546 (636)
....+|||+|||.|.++..|++..- .|+.+|.++.++..+.++ |+ +-... |. +.+ ++| .+||+|.+.
T Consensus 36 ~~~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~-~~l-~~~~~~fD~V~~~ 110 (260)
T 1vl5_A 36 KGNEEVLDVATGGGHVANAFAPFVK---KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDA-EQM-PFTDERFHIVTCR 110 (260)
T ss_dssp CSCCEEEEETCTTCHHHHHHGGGSS---EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC--CC-CSCTTCEEEEEEE
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhCC---EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecH-HhC-CCCCCCEEEEEEh
Confidence 4467999999999999999988742 778888887888887765 43 22222 22 222 355 899999998
Q ss_pred cccccCCCCcCHHHHHHHHhhcccCCcEEEEEe
Q 006662 547 SIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRD 579 (636)
Q Consensus 547 ~~fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d 579 (636)
.++.... +.+.+|-|+-|+|||||++++.+
T Consensus 111 ~~l~~~~---d~~~~l~~~~r~LkpgG~l~~~~ 140 (260)
T 1vl5_A 111 IAAHHFP---NPASFVSEAYRVLKKGGQLLLVD 140 (260)
T ss_dssp SCGGGCS---CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhhHhcC---CHHHHHHHHHHHcCCCCEEEEEE
Confidence 7776553 56899999999999999999974
No 247
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=98.66 E-value=1.4e-07 Score=93.99 Aligned_cols=161 Identities=12% Similarity=0.071 Sum_probs=101.1
Q ss_pred hhHHHHHHHHHHHHHhhhccCCCCCcceEeeecccchhhhhhhc--CCCeEEEEecCCCCCccchHHHHhh----cc--c
Q 006662 452 EDTALWKKRVTYYKSVDYQLAQPGRYRNLLDMNAYLGGFAAALV--DDPLWVMNTVPVEAKINTLGVIYER----GL--I 523 (636)
Q Consensus 452 ~d~~~w~~~v~~y~~~~~~l~~~~~~r~vlD~~~g~ggfaa~l~--~~~v~~mnv~~~~~~~~~l~~~~eR----gl--i 523 (636)
...+.|.+++.....++..+.. ....+|||+|||.|.++..|+ ..+. .|+.+|.++.++.++.++ |+ +
T Consensus 47 ~~~~~~~~~~~d~l~~~~~~~~-~~~~~vLDiG~G~G~~~~~la~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~v 122 (240)
T 1xdz_A 47 EKKEVYLKHFYDSITAAFYVDF-NQVNTICDVGAGAGFPSLPIKICFPHL---HVTIVDSLNKRITFLEKLSEALQLENT 122 (240)
T ss_dssp SHHHHHHHTHHHHHGGGGTSCG-GGCCEEEEECSSSCTTHHHHHHHCTTC---EEEEEESCHHHHHHHHHHHHHHTCSSE
T ss_pred CHHHHHHHHHHHHHhHHHhccc-CCCCEEEEecCCCCHHHHHHHHhCCCC---EEEEEeCCHHHHHHHHHHHHHcCCCCE
Confidence 3445666665433333322221 235689999999999988887 3332 456667776777777653 54 3
Q ss_pred chhhccccccCC---CCCccceeeeccccccCCCCcCHHHHHHHHhhcccCCcEEEEEeC---HHHHHHHHHHHhcCCCc
Q 006662 524 GTYQNWCEAMST---YPRTYDLIHADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDD---VDILVKIKSITDGMEWE 597 (636)
Q Consensus 524 ~~~~~~ce~~~~---yp~t~Dl~H~~~~fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~---~~~~~~~~~~~~~~~W~ 597 (636)
-+++.=.+.+.. .+.+||+|.+..+ .+++.++-++.|+|||||.+++.+. .+.+..+.+.++...++
T Consensus 123 ~~~~~d~~~~~~~~~~~~~fD~V~~~~~-------~~~~~~l~~~~~~LkpgG~l~~~~g~~~~~~~~~~~~~l~~~g~~ 195 (240)
T 1xdz_A 123 TFCHDRAETFGQRKDVRESYDIVTARAV-------ARLSVLSELCLPLVKKNGLFVALKAASAEEELNAGKKAITTLGGE 195 (240)
T ss_dssp EEEESCHHHHTTCTTTTTCEEEEEEECC-------SCHHHHHHHHGGGEEEEEEEEEEECC-CHHHHHHHHHHHHHTTEE
T ss_pred EEEeccHHHhcccccccCCccEEEEecc-------CCHHHHHHHHHHhcCCCCEEEEEeCCCchHHHHHHHHHHHHcCCe
Confidence 344321223332 2578999998663 4578999999999999999999753 44566677777778887
Q ss_pred eEEecc--CCCCCCcceEEEEEecCCCC
Q 006662 598 GRIADH--ENGPRQREKILFANKKYWTA 623 (636)
Q Consensus 598 ~~~~~~--e~~~~~~~~~l~~~K~~w~~ 623 (636)
...... -......-.+++++|.=.++
T Consensus 196 ~~~~~~~~~~~~~~~~~l~~~~k~~~~~ 223 (240)
T 1xdz_A 196 LENIHSFKLPIEESDRNIMVIRKIKNTP 223 (240)
T ss_dssp EEEEEEEECTTTCCEEEEEEEEECSCCC
T ss_pred EeEEEEEecCCCCCceEEEEEEecCCCC
Confidence 653221 11112345677777764443
No 248
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.65 E-value=6.4e-08 Score=99.80 Aligned_cols=99 Identities=11% Similarity=0.107 Sum_probs=74.7
Q ss_pred CcEEEEeCCCCcHHHHHHhhcC--CEEEEcCcCCchHHHHHHHHHcC---------CCeEEEEeccccC-CCCCCCeeEE
Q 006662 219 IRTAIDTGCGVASWGAYLMSRN--ILAVSFAPRDTHEAQVQFALERG---------VPALIGVMASIRL-PYPSRAFDMA 286 (636)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~~--v~vv~i~p~Dis~a~l~~A~erg---------~~~~~~~~d~~~L-pf~~~sFDlV 286 (636)
+.+|||||||+|.++..+++.. ..++.+ |+++.+++.|+++. ..+.+...|.... +..+++||+|
T Consensus 79 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~v---Did~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 155 (283)
T 2i7c_A 79 PKNVLVVGGGDGGIIRELCKYKSVENIDIC---EIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVI 155 (283)
T ss_dssp CCEEEEEECTTSHHHHHHTTCTTCCEEEEE---ESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEE
T ss_pred CCeEEEEeCCcCHHHHHHHHcCCCCEEEEE---ECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEE
Confidence 4599999999999999999873 455555 88999999998653 3467887776542 2236789999
Q ss_pred EecccccccccCh----HHHHHHHHhcccCCcEEEEEeC
Q 006662 287 HCSRCLIPWGQYD----GLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 287 ~~s~~L~h~~~d~----~~~L~el~RvLKPGG~Liis~p 321 (636)
++.... ++.... ..+++++.++|+|||.+++...
T Consensus 156 i~d~~~-~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~ 193 (283)
T 2i7c_A 156 IVDSSD-PIGPAETLFNQNFYEKIYNALKPNGYCVAQCE 193 (283)
T ss_dssp EEECCC-TTTGGGGGSSHHHHHHHHHHEEEEEEEEEECC
T ss_pred EEcCCC-CCCcchhhhHHHHHHHHHHhcCCCcEEEEECC
Confidence 985433 332221 5899999999999999999854
No 249
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=98.64 E-value=3.4e-08 Score=99.71 Aligned_cols=97 Identities=14% Similarity=0.214 Sum_probs=73.8
Q ss_pred CCcceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhh----cc---cchhh-ccccccCCCC-Cccceeee
Q 006662 475 GRYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GL---IGTYQ-NWCEAMSTYP-RTYDLIHA 545 (636)
Q Consensus 475 ~~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl---i~~~~-~~ce~~~~yp-~t~Dl~H~ 545 (636)
....+|||+|||.|.++..|++.+- .+|+.+|.++.++..+.++ |+ +-+.. |+ +.++ +| .+||+|.+
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~-~~~~-~~~~~fD~i~~ 120 (267)
T 3kkz_A 45 TEKSLIADIGCGTGGQTMVLAGHVT--GQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSM-DDLP-FRNEELDLIWS 120 (267)
T ss_dssp CTTCEEEEETCTTCHHHHHHHTTCS--SEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCT-TSCC-CCTTCEEEEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHhccC--CEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcCh-hhCC-CCCCCEEEEEE
Confidence 3467999999999999999998843 3566777777888887766 43 22222 22 2232 43 89999999
Q ss_pred ccccccCCCCcCHHHHHHHHhhcccCCcEEEEEe
Q 006662 546 DSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRD 579 (636)
Q Consensus 546 ~~~fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d 579 (636)
.++|... +.+.+|.++.|+|||||++++.+
T Consensus 121 ~~~~~~~----~~~~~l~~~~~~LkpgG~l~~~~ 150 (267)
T 3kkz_A 121 EGAIYNI----GFERGLNEWRKYLKKGGYLAVSE 150 (267)
T ss_dssp SSCGGGT----CHHHHHHHHGGGEEEEEEEEEEE
T ss_pred cCCceec----CHHHHHHHHHHHcCCCCEEEEEE
Confidence 8888654 57899999999999999999985
No 250
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=98.64 E-value=8e-08 Score=92.99 Aligned_cols=147 Identities=14% Similarity=0.090 Sum_probs=97.1
Q ss_pred cCcchhcchhhHHHHHHHHHHHHHhhhccCCCCCcceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhh--
Q 006662 443 DGVTAEMFREDTALWKKRVTYYKSVDYQLAQPGRYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER-- 520 (636)
Q Consensus 443 ~~~~~~~f~~d~~~w~~~v~~y~~~~~~l~~~~~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR-- 520 (636)
+|+..+.|..+...-++.+.. .++..+.. ....+|||+|||.|.++..|++..- ..+|+.+|.++.++..+.++
T Consensus 10 ~g~~d~~f~~~g~~~~~~i~~--~~l~~l~~-~~~~~vLDiG~G~G~~~~~la~~~~-~~~v~~vD~s~~~~~~a~~~~~ 85 (204)
T 3e05_A 10 GIDDDEFATAKKLITKQEVRA--VTLSKLRL-QDDLVMWDIGAGSASVSIEASNLMP-NGRIFALERNPQYLGFIRDNLK 85 (204)
T ss_dssp CCCGGGSCCCTTTSCCHHHHH--HHHHHTTC-CTTCEEEEETCTTCHHHHHHHHHCT-TSEEEEEECCHHHHHHHHHHHH
T ss_pred CCCCcHHhccCCcCChHHHHH--HHHHHcCC-CCCCEEEEECCCCCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHH
Confidence 456666777755543333432 12222333 4467999999999999999987630 02456667776788887765
Q ss_pred --cc--cchhh-ccccccCCCCCccceeeeccccccCCCCcCHHHHHHHHhhcccCCcEEEEEe-CHHHHHHHHHHHhcC
Q 006662 521 --GL--IGTYQ-NWCEAMSTYPRTYDLIHADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRD-DVDILVKIKSITDGM 594 (636)
Q Consensus 521 --gl--i~~~~-~~ce~~~~yp~t~Dl~H~~~~fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d-~~~~~~~~~~~~~~~ 594 (636)
|+ +-+++ |..+.+. ....||+|-+++.+. +++.+|-++-|+|||||.+++.. ..+....+.++++..
T Consensus 86 ~~~~~~v~~~~~d~~~~~~-~~~~~D~i~~~~~~~------~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~l~~~ 158 (204)
T 3e05_A 86 KFVARNVTLVEAFAPEGLD-DLPDPDRVFIGGSGG------MLEEIIDAVDRRLKSEGVIVLNAVTLDTLTKAVEFLEDH 158 (204)
T ss_dssp HHTCTTEEEEECCTTTTCT-TSCCCSEEEESCCTT------CHHHHHHHHHHHCCTTCEEEEEECBHHHHHHHHHHHHHT
T ss_pred HhCCCcEEEEeCChhhhhh-cCCCCCEEEECCCCc------CHHHHHHHHHHhcCCCeEEEEEecccccHHHHHHHHHHC
Confidence 44 22222 2222221 126799998866553 67899999999999999999985 446778888888888
Q ss_pred CCceEE
Q 006662 595 EWEGRI 600 (636)
Q Consensus 595 ~W~~~~ 600 (636)
.|++.+
T Consensus 159 g~~~~~ 164 (204)
T 3e05_A 159 GYMVEV 164 (204)
T ss_dssp TCEEEE
T ss_pred CCceeE
Confidence 886543
No 251
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.64 E-value=8.8e-08 Score=97.90 Aligned_cols=90 Identities=10% Similarity=0.004 Sum_probs=70.5
Q ss_pred CcEEEEeCCCCcHHHHHHhhcCCEEEEcCcCCchHHHHHHHHHcC---------CCeEEEEeccccCCCCCCCeeEEEec
Q 006662 219 IRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALERG---------VPALIGVMASIRLPYPSRAFDMAHCS 289 (636)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~~v~vv~i~p~Dis~a~l~~A~erg---------~~~~~~~~d~~~Lpf~~~sFDlV~~s 289 (636)
+.+|||||||+|.++..+++.+..++.+ |+++.+++.|+++. ..+.+...|..... ++||+|++.
T Consensus 73 ~~~VL~iG~G~G~~~~~ll~~~~~v~~v---eid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~---~~fD~Ii~d 146 (262)
T 2cmg_A 73 LKEVLIVDGFDLELAHQLFKYDTHIDFV---QADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI---KKYDLIFCL 146 (262)
T ss_dssp CCEEEEESSCCHHHHHHHTTSSCEEEEE---CSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC---CCEEEEEES
T ss_pred CCEEEEEeCCcCHHHHHHHhCCCEEEEE---ECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH---hhCCEEEEC
Confidence 4599999999999999998875344444 89999999886542 24677777766544 789999985
Q ss_pred ccccccccChHHHHHHHHhcccCCcEEEEEe
Q 006662 290 RCLIPWGQYDGLYLIEVDRVLRPGGYWILSG 320 (636)
Q Consensus 290 ~~L~h~~~d~~~~L~el~RvLKPGG~Liis~ 320 (636)
. .++..+++++.++|||||.+++..
T Consensus 147 ~------~dp~~~~~~~~~~L~pgG~lv~~~ 171 (262)
T 2cmg_A 147 Q------EPDIHRIDGLKRMLKEDGVFISVA 171 (262)
T ss_dssp S------CCCHHHHHHHHTTEEEEEEEEEEE
T ss_pred C------CChHHHHHHHHHhcCCCcEEEEEc
Confidence 2 355569999999999999999974
No 252
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=98.63 E-value=4.3e-08 Score=91.91 Aligned_cols=110 Identities=7% Similarity=0.084 Sum_probs=84.3
Q ss_pred cceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhh----cc--cchhh-ccccccCCCC-Cccceeeeccc
Q 006662 477 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GL--IGTYQ-NWCEAMSTYP-RTYDLIHADSI 548 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl--i~~~~-~~ce~~~~yp-~t~Dl~H~~~~ 548 (636)
..+|||+|||.|.++.+|++.. .+|+.+|.++.++..+.++ |+ +-+++ |+.+ .+| .+||+|.++++
T Consensus 36 ~~~vLdiG~G~G~~~~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~---~~~~~~~D~i~~~~~ 109 (183)
T 2yxd_A 36 DDVVVDVGCGSGGMTVEIAKRC---KFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAED---VLDKLEFNKAFIGGT 109 (183)
T ss_dssp TCEEEEESCCCSHHHHHHHTTS---SEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHH---HGGGCCCSEEEECSC
T ss_pred CCEEEEeCCCCCHHHHHHHhcC---CeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccc---cccCCCCcEEEECCc
Confidence 5689999999999999998843 3566667776788877766 43 22222 3333 344 68999999766
Q ss_pred cccCCCCcCHHHHHHHHhhcccCCcEEEEEe-CHHHHHHHHHHHhcCCCceEEe
Q 006662 549 FSLYKDRCEMEDVLLEMDRILRPEGSVIIRD-DVDILVKIKSITDGMEWEGRIA 601 (636)
Q Consensus 549 fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d-~~~~~~~~~~~~~~~~W~~~~~ 601 (636)
..++.+|-++.|+ |||.+++.+ ..+....+.+.++...|++...
T Consensus 110 -------~~~~~~l~~~~~~--~gG~l~~~~~~~~~~~~~~~~l~~~g~~~~~~ 154 (183)
T 2yxd_A 110 -------KNIEKIIEILDKK--KINHIVANTIVLENAAKIINEFESRGYNVDAV 154 (183)
T ss_dssp -------SCHHHHHHHHHHT--TCCEEEEEESCHHHHHHHHHHHHHTTCEEEEE
T ss_pred -------ccHHHHHHHHhhC--CCCEEEEEecccccHHHHHHHHHHcCCeEEEE
Confidence 5678999999999 999999987 5677788888888888988765
No 253
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.63 E-value=1.5e-08 Score=101.50 Aligned_cols=101 Identities=14% Similarity=0.155 Sum_probs=75.9
Q ss_pred CcceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhhcc-----cchh-hccccccCCCC-Cccceeeeccc
Q 006662 476 RYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERGL-----IGTY-QNWCEAMSTYP-RTYDLIHADSI 548 (636)
Q Consensus 476 ~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRgl-----i~~~-~~~ce~~~~yp-~t~Dl~H~~~~ 548 (636)
....|||+|||.|.++.+|++... -+|+.+|.++.++..+.++.- +-++ .+|-+-...+| .+||.|..+.+
T Consensus 60 ~G~rVLdiG~G~G~~~~~~~~~~~--~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~FD~i~~D~~ 137 (236)
T 3orh_A 60 KGGRVLEVGFGMAIAASKVQEAPI--DEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTY 137 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHTTSCE--EEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCC
T ss_pred CCCeEEEECCCccHHHHHHHHhCC--cEEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhcccccccCCceEEEeee
Confidence 357899999999999999998754 466677777789998887643 1122 24444455676 88999988777
Q ss_pred cccCC--CCcCHHHHHHHHhhcccCCcEEEEE
Q 006662 549 FSLYK--DRCEMEDVLLEMDRILRPEGSVIIR 578 (636)
Q Consensus 549 fs~~~--~~c~~~~~l~e~dRiLrPgG~~i~~ 578 (636)
.+.+. +.-+.+.++-|+-|+|||||.|++-
T Consensus 138 ~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~ 169 (236)
T 3orh_A 138 PLSEETWHTHQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp CCBGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred ecccchhhhcchhhhhhhhhheeCCCCEEEEE
Confidence 66543 3345678999999999999999985
No 254
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=98.63 E-value=1.1e-08 Score=102.06 Aligned_cols=99 Identities=19% Similarity=0.273 Sum_probs=75.2
Q ss_pred CCcceEeeecccchhhhhhhcCC-CeEEEEecCCCCCccchHHHHhhcc----cchhh-ccccccCCCC-Cccceeeecc
Q 006662 475 GRYRNLLDMNAYLGGFAAALVDD-PLWVMNTVPVEAKINTLGVIYERGL----IGTYQ-NWCEAMSTYP-RTYDLIHADS 547 (636)
Q Consensus 475 ~~~r~vlD~~~g~ggfaa~l~~~-~v~~mnv~~~~~~~~~l~~~~eRgl----i~~~~-~~ce~~~~yp-~t~Dl~H~~~ 547 (636)
....+|||+|||.|.++.+|++. + .+|+.+|.++.++..+.++.- +-..+ |..+ + ++| .+||+|++.+
T Consensus 54 ~~~~~vLdiG~G~G~~~~~l~~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~-~-~~~~~~fD~v~~~~ 128 (266)
T 3ujc_A 54 NENSKVLDIGSGLGGGCMYINEKYG---AHTHGIDICSNIVNMANERVSGNNKIIFEANDILT-K-EFPENNFDLIYSRD 128 (266)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHC---CEEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTT-C-CCCTTCEEEEEEES
T ss_pred CCCCEEEEECCCCCHHHHHHHHHcC---CEEEEEeCCHHHHHHHHHHhhcCCCeEEEECcccc-C-CCCCCcEEEEeHHH
Confidence 45679999999999999999886 4 366777877789999888752 22222 3222 2 454 8999999988
Q ss_pred ccccCCCCcCHHHHHHHHhhcccCCcEEEEEe
Q 006662 548 IFSLYKDRCEMEDVLLEMDRILRPEGSVIIRD 579 (636)
Q Consensus 548 ~fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d 579 (636)
+|.... .-+...+|-|+-|+|||||.+++.+
T Consensus 129 ~l~~~~-~~~~~~~l~~~~~~L~pgG~l~~~~ 159 (266)
T 3ujc_A 129 AILALS-LENKNKLFQKCYKWLKPTGTLLITD 159 (266)
T ss_dssp CGGGSC-HHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHhcC-hHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 877552 1356799999999999999999985
No 255
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=98.62 E-value=3.8e-08 Score=95.47 Aligned_cols=119 Identities=16% Similarity=0.145 Sum_probs=86.8
Q ss_pred cceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhh-cccchhhccccccCCCCCccceeeeccccccCCCC
Q 006662 477 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER-GLIGTYQNWCEAMSTYPRTYDLIHADSIFSLYKDR 555 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR-gli~~~~~~ce~~~~yp~t~Dl~H~~~~fs~~~~~ 555 (636)
..+|||+|||.|.++.+|++.+. +|+.+|.++.++..+.++ ++--...|. +.+. .+.+||+|.+.+++.... .
T Consensus 44 ~~~vLDiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~d~-~~~~-~~~~fD~v~~~~~l~~~~-~ 117 (211)
T 3e23_A 44 GAKILELGCGAGYQAEAMLAAGF---DVDATDGSPELAAEASRRLGRPVRTMLF-HQLD-AIDAYDAVWAHACLLHVP-R 117 (211)
T ss_dssp TCEEEESSCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHTSCCEECCG-GGCC-CCSCEEEEEECSCGGGSC-H
T ss_pred CCcEEEECCCCCHHHHHHHHcCC---eEEEECCCHHHHHHHHHhcCCceEEeee-ccCC-CCCcEEEEEecCchhhcC-H
Confidence 56899999999999999998854 567778777889888888 432111122 2233 448999999988776543 2
Q ss_pred cCHHHHHHHHhhcccCCcEEEEEeCH---------------HHHHHHHHHHhcCC-CceEEe
Q 006662 556 CEMEDVLLEMDRILRPEGSVIIRDDV---------------DILVKIKSITDGME-WEGRIA 601 (636)
Q Consensus 556 c~~~~~l~e~dRiLrPgG~~i~~d~~---------------~~~~~~~~~~~~~~-W~~~~~ 601 (636)
-+...+|-|+-|+|||||++++.... -....++++++.-. ++....
T Consensus 118 ~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~f~~~~~ 179 (211)
T 3e23_A 118 DELADVLKLIWRALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARYAEAGTWASVAV 179 (211)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHHHHHCCCSEEEE
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHHHHHHhCCCcEEEEE
Confidence 25678999999999999999997321 14567778877777 776643
No 256
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=98.62 E-value=3.1e-08 Score=93.64 Aligned_cols=132 Identities=14% Similarity=0.192 Sum_probs=86.1
Q ss_pred CcceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhh----cc----cchhh-ccccccCCCCCccceeeec
Q 006662 476 RYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GL----IGTYQ-NWCEAMSTYPRTYDLIHAD 546 (636)
Q Consensus 476 ~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl----i~~~~-~~ce~~~~yp~t~Dl~H~~ 546 (636)
...+|||+|||.|.++.+|++.. -+|+.+|.++.++..+.++ |+ +-+.+ |+.+.+. +.+||+|.++
T Consensus 52 ~~~~vLdiG~G~G~~~~~~~~~~---~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~--~~~~D~v~~~ 126 (194)
T 1dus_A 52 KDDDILDLGCGYGVIGIALADEV---KSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVK--DRKYNKIITN 126 (194)
T ss_dssp TTCEEEEETCTTSHHHHHHGGGS---SEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCT--TSCEEEEEEC
T ss_pred CCCeEEEeCCCCCHHHHHHHHcC---CeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcccc--cCCceEEEEC
Confidence 46789999999999999998873 3666777776788777766 43 22222 3322211 4789999997
Q ss_pred cccccCCCCcCHHHHHHHHhhcccCCcEEEEEeCH-HHHHHHHHHHhcCCCceEEeccCCCCCCcceEEEEEe
Q 006662 547 SIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDDV-DILVKIKSITDGMEWEGRIADHENGPRQREKILFANK 618 (636)
Q Consensus 547 ~~fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~~-~~~~~~~~~~~~~~W~~~~~~~e~~~~~~~~~l~~~K 618 (636)
..|.. ..-....+|-++-|+|+|||.+++.+.. +....+.+.++..-+++.+.... ..-.++.++|
T Consensus 127 ~~~~~--~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~----~~~~~~~~~k 193 (194)
T 1dus_A 127 PPIRA--GKEVLHRIIEEGKELLKDNGEIWVVIQTKQGAKSLAKYMKDVFGNVETVTIK----GGYRVLKSKK 193 (194)
T ss_dssp CCSTT--CHHHHHHHHHHHHHHEEEEEEEEEEEESTHHHHHHHHHHHHHHSCCEEEEEE----TTEEEEEEEC
T ss_pred CCccc--chhHHHHHHHHHHHHcCCCCEEEEEECCCCChHHHHHHHHHHhcceEEEecC----CcEEEEEEee
Confidence 76542 1234578999999999999999998643 33344555544443445544333 1345566554
No 257
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=98.62 E-value=1.9e-07 Score=102.39 Aligned_cols=109 Identities=17% Similarity=0.131 Sum_probs=80.5
Q ss_pred HHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhc--C-CEEEEcCcCCchHHHHHHHHHc----CC-CeEEEEeccccCC-
Q 006662 207 DIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR--N-ILAVSFAPRDTHEAQVQFALER----GV-PALIGVMASIRLP- 277 (636)
Q Consensus 207 ~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~--~-v~vv~i~p~Dis~a~l~~A~er----g~-~~~~~~~d~~~Lp- 277 (636)
.+..++...++. +|||+|||+|..+..+++. + ..++++ |+++.+++.++++ +. ++.+...|...++
T Consensus 250 l~~~~l~~~~g~--~VLDlgaG~G~~t~~la~~~~~~~~v~a~---D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~ 324 (450)
T 2yxl_A 250 VASIVLDPKPGE--TVVDLAAAPGGKTTHLAELMKNKGKIYAF---DVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPE 324 (450)
T ss_dssp HHHHHHCCCTTC--EEEESSCTTCHHHHHHHHHTTTCSEEEEE---CSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSS
T ss_pred HHHHhcCCCCcC--EEEEeCCCccHHHHHHHHHcCCCCEEEEE---cCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcch
Confidence 344555555555 9999999999999999985 2 566666 8899988877654 54 5788888887776
Q ss_pred -CCCCCeeEEEe------cccccccccCh----------------HHHHHHHHhcccCCcEEEEEeC
Q 006662 278 -YPSRAFDMAHC------SRCLIPWGQYD----------------GLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 278 -f~~~sFDlV~~------s~~L~h~~~d~----------------~~~L~el~RvLKPGG~Liis~p 321 (636)
+++++||+|++ ..++ +..++. ..++.++.++|||||++++++.
T Consensus 325 ~~~~~~fD~Vl~D~Pcsg~g~~-~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tc 390 (450)
T 2yxl_A 325 IIGEEVADKVLLDAPCTSSGTI-GKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTC 390 (450)
T ss_dssp SSCSSCEEEEEEECCCCCGGGT-TTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEES
T ss_pred hhccCCCCEEEEcCCCCCCeee-ccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 55578999996 2222 212221 4689999999999999999875
No 258
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=98.62 E-value=8.1e-08 Score=93.90 Aligned_cols=143 Identities=11% Similarity=0.061 Sum_probs=91.9
Q ss_pred cCcchhcchhhHHHHHHHHHHHHHhhhccCCCCCcceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhh--
Q 006662 443 DGVTAEMFREDTALWKKRVTYYKSVDYQLAQPGRYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER-- 520 (636)
Q Consensus 443 ~~~~~~~f~~d~~~w~~~v~~y~~~~~~l~~~~~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR-- 520 (636)
+|+..+.|..+...-++.+... ++..+.. ....+|||+|||.|.++.+|++.+ ..|+.+|.++.++..+.++
T Consensus 25 ~g~~d~~f~~~~~~~~~~~~~~--~l~~l~~-~~~~~vLDlGcG~G~~~~~la~~~---~~v~~vD~s~~~~~~a~~~~~ 98 (204)
T 3njr_A 25 PGRPESAFAHDGQITKSPMRAL--TLAALAP-RRGELLWDIGGGSGSVSVEWCLAG---GRAITIEPRADRIENIQKNID 98 (204)
T ss_dssp SCCCGGGSCCSSCCCCHHHHHH--HHHHHCC-CTTCEEEEETCTTCHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHH
T ss_pred CCCCHHHhhcCCCCCcHHHHHH--HHHhcCC-CCCCEEEEecCCCCHHHHHHHHcC---CEEEEEeCCHHHHHHHHHHHH
Confidence 4555666654443333344321 2222333 346789999999999999998873 3567777777888887765
Q ss_pred --cccchhhccccccCC-CC--CccceeeeccccccCCCCcCHHHHHHHHhhcccCCcEEEEEe-CHHHHHHHHHHHhcC
Q 006662 521 --GLIGTYQNWCEAMST-YP--RTYDLIHADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRD-DVDILVKIKSITDGM 594 (636)
Q Consensus 521 --gli~~~~~~ce~~~~-yp--~t~Dl~H~~~~fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d-~~~~~~~~~~~~~~~ 594 (636)
|+-+-+.-.+..+.. .+ ..||+|-+++.+ +.+ ++-++-|+|||||.+++.. ..+....+.+.++..
T Consensus 99 ~~g~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~~-------~~~-~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~~~ 170 (204)
T 3njr_A 99 TYGLSPRMRAVQGTAPAALADLPLPEAVFIGGGG-------SQA-LYDRLWEWLAPGTRIVANAVTLESETLLTQLHARH 170 (204)
T ss_dssp HTTCTTTEEEEESCTTGGGTTSCCCSEEEECSCC-------CHH-HHHHHHHHSCTTCEEEEEECSHHHHHHHHHHHHHH
T ss_pred HcCCCCCEEEEeCchhhhcccCCCCCEEEECCcc-------cHH-HHHHHHHhcCCCcEEEEEecCcccHHHHHHHHHhC
Confidence 443111111222222 22 479998875522 456 9999999999999999975 456777777777777
Q ss_pred CCceE
Q 006662 595 EWEGR 599 (636)
Q Consensus 595 ~W~~~ 599 (636)
.+++.
T Consensus 171 g~~i~ 175 (204)
T 3njr_A 171 GGQLL 175 (204)
T ss_dssp CSEEE
T ss_pred CCcEE
Confidence 66655
No 259
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=98.61 E-value=2e-08 Score=102.52 Aligned_cols=100 Identities=19% Similarity=0.288 Sum_probs=74.5
Q ss_pred cceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhhc----ccch------hh-ccccccC--CCC-Cccce
Q 006662 477 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERG----LIGT------YQ-NWCEAMS--TYP-RTYDL 542 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRg----li~~------~~-~~ce~~~--~yp-~t~Dl 542 (636)
..+|||+|||.|.++..|++.+. +|+.+|.++.++..+.++. .-.. .. |+. .+. -++ .+||+
T Consensus 58 ~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~~~~fD~ 133 (293)
T 3thr_A 58 CHRVLDVACGTGVDSIMLVEEGF---SVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWL-TLDKDVPAGDGFDA 133 (293)
T ss_dssp CCEEEETTCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGG-GHHHHSCCTTCEEE
T ss_pred CCEEEEecCCCCHHHHHHHHCCC---eEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChh-hCccccccCCCeEE
Confidence 56899999999999999998865 7888898888999887753 1111 11 111 111 044 89999
Q ss_pred eeec-cccccCCC----CcCHHHHHHHHhhcccCCcEEEEEeC
Q 006662 543 IHAD-SIFSLYKD----RCEMEDVLLEMDRILRPEGSVIIRDD 580 (636)
Q Consensus 543 ~H~~-~~fs~~~~----~c~~~~~l~e~dRiLrPgG~~i~~d~ 580 (636)
|+|. .+|....+ .-....+|-++.|+|||||++++...
T Consensus 134 V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 176 (293)
T 3thr_A 134 VICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHR 176 (293)
T ss_dssp EEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 9997 57765444 44578999999999999999999864
No 260
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.61 E-value=2.2e-08 Score=104.60 Aligned_cols=99 Identities=15% Similarity=0.130 Sum_probs=62.5
Q ss_pred cEEEEeCCCCcHHHHHHhhcC-CEEEEcCcCCchHHHHHHHH-Hc-C-CCeEEEEe-ccccCCCCCCCeeEEEeccccc-
Q 006662 220 RTAIDTGCGVASWGAYLMSRN-ILAVSFAPRDTHEAQVQFAL-ER-G-VPALIGVM-ASIRLPYPSRAFDMAHCSRCLI- 293 (636)
Q Consensus 220 r~VLDIGCGtG~~a~~La~~~-v~vv~i~p~Dis~a~l~~A~-er-g-~~~~~~~~-d~~~Lpf~~~sFDlV~~s~~L~- 293 (636)
.+|||||||+|.++..+++++ +.++++.... +..++..+. +. + ..+.+... |...++ .++||+|+|..+..
T Consensus 84 ~~VLDlGcG~G~~s~~la~~~~V~gvD~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~D~~~l~--~~~fD~V~sd~~~~~ 160 (305)
T 2p41_A 84 GKVVDLGCGRGGWSYYCGGLKNVREVKGLTKG-GPGHEEPIPMSTYGWNLVRLQSGVDVFFIP--PERCDTLLCDIGESS 160 (305)
T ss_dssp EEEEEETCTTSHHHHHHHTSTTEEEEEEECCC-STTSCCCCCCCSTTGGGEEEECSCCTTTSC--CCCCSEEEECCCCCC
T ss_pred CEEEEEcCCCCHHHHHHHhcCCEEEEeccccC-chhHHHHHHhhhcCCCCeEEEeccccccCC--cCCCCEEEECCcccc
Confidence 499999999999999999983 4444441000 111111111 11 1 23667666 665554 56899999976652
Q ss_pred -ccccChH---HHHHHHHhcccCCcEEEEEeC
Q 006662 294 -PWGQYDG---LYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 294 -h~~~d~~---~~L~el~RvLKPGG~Liis~p 321 (636)
++..+.. .+|.++.++|||||.|++..+
T Consensus 161 g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~ 192 (305)
T 2p41_A 161 PNPTVEAGRTLRVLNLVENWLSNNTQFCVKVL 192 (305)
T ss_dssp SSHHHHHHHHHHHHHHHHHHCCTTCEEEEEES
T ss_pred CcchhhHHHHHHHHHHHHHHhCCCCEEEEEeC
Confidence 2222222 478899999999999998754
No 261
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=98.61 E-value=2.9e-08 Score=98.98 Aligned_cols=96 Identities=11% Similarity=0.137 Sum_probs=71.2
Q ss_pred CcceEeeecccchhhhhhhcCC-CeEEEEecCCCCCccchHHHHhh----cc---cchhh-ccccccCCCCCccceeeec
Q 006662 476 RYRNLLDMNAYLGGFAAALVDD-PLWVMNTVPVEAKINTLGVIYER----GL---IGTYQ-NWCEAMSTYPRTYDLIHAD 546 (636)
Q Consensus 476 ~~r~vlD~~~g~ggfaa~l~~~-~v~~mnv~~~~~~~~~l~~~~eR----gl---i~~~~-~~ce~~~~yp~t~Dl~H~~ 546 (636)
...+|||+|||.|.++.+|++. +. +|+.+|.++.++..+.++ |+ +.+.+ |+. .+.. +.+||+|.+.
T Consensus 36 ~~~~VLDiGcG~G~~~~~la~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~-~~~~-~~~fD~V~~~ 110 (256)
T 1nkv_A 36 PGTRILDLGSGSGEMLCTWARDHGI---TGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAA-GYVA-NEKCDVAACV 110 (256)
T ss_dssp TTCEEEEETCTTCHHHHHHHHHTCC---EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCT-TCCC-SSCEEEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhcCC---eEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChH-hCCc-CCCCCEEEEC
Confidence 3668999999999999999865 32 456677777888887665 44 22222 222 2222 6899999997
Q ss_pred cccccCCCCcCHHHHHHHHhhcccCCcEEEEEe
Q 006662 547 SIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRD 579 (636)
Q Consensus 547 ~~fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d 579 (636)
+++-... +...+|-|+-|+|||||.+++.+
T Consensus 111 ~~~~~~~---~~~~~l~~~~r~LkpgG~l~~~~ 140 (256)
T 1nkv_A 111 GATWIAG---GFAGAEELLAQSLKPGGIMLIGE 140 (256)
T ss_dssp SCGGGTS---SSHHHHHHHTTSEEEEEEEEEEE
T ss_pred CChHhcC---CHHHHHHHHHHHcCCCeEEEEec
Confidence 7775444 46899999999999999999985
No 262
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=98.60 E-value=3.1e-08 Score=97.80 Aligned_cols=118 Identities=16% Similarity=0.072 Sum_probs=85.7
Q ss_pred cceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhhcccchhhccccccC--CC-CCccceeeeccccccCC
Q 006662 477 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERGLIGTYQNWCEAMS--TY-PRTYDLIHADSIFSLYK 553 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRgli~~~~~~ce~~~--~y-p~t~Dl~H~~~~fs~~~ 553 (636)
..+|||+|||.|.++.+|++.+. +|+.+|.++.++..+.+++...-++-.+..+. ++ +.+||+|.+.++|....
T Consensus 54 ~~~vLDiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~ 130 (242)
T 3l8d_A 54 EAEVLDVGCGDGYGTYKLSRTGY---KAVGVDISEVMIQKGKERGEGPDLSFIKGDLSSLPFENEQFEAIMAINSLEWTE 130 (242)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHTTTCBTTEEEEECBTTBCSSCTTCEEEEEEESCTTSSS
T ss_pred CCeEEEEcCCCCHHHHHHHHcCC---eEEEEECCHHHHHHHHhhcccCCceEEEcchhcCCCCCCCccEEEEcChHhhcc
Confidence 45899999999999999998865 56777877789999998853221111122222 24 38999999988887553
Q ss_pred CCcCHHHHHHHHhhcccCCcEEEEEeCH----------------------HHHHHHHHHHhcCCCceEE
Q 006662 554 DRCEMEDVLLEMDRILRPEGSVIIRDDV----------------------DILVKIKSITDGMEWEGRI 600 (636)
Q Consensus 554 ~~c~~~~~l~e~dRiLrPgG~~i~~d~~----------------------~~~~~~~~~~~~~~W~~~~ 600 (636)
+...+|.++.|+|||||.++|.+.. -....++++++...+++..
T Consensus 131 ---~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 196 (242)
T 3l8d_A 131 ---EPLRALNEIKRVLKSDGYACIAILGPTAKPRENSYPRLYGKDVVCNTMMPWEFEQLVKEQGFKVVD 196 (242)
T ss_dssp ---CHHHHHHHHHHHEEEEEEEEEEEECTTCGGGGGGGGGGGTCCCSSCCCCHHHHHHHHHHTTEEEEE
T ss_pred ---CHHHHHHHHHHHhCCCeEEEEEEcCCcchhhhhhhhhhccccccccCCCHHHHHHHHHHcCCEEEE
Confidence 5579999999999999999998511 0124677777777777653
No 263
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=98.60 E-value=4.9e-08 Score=97.43 Aligned_cols=106 Identities=12% Similarity=0.155 Sum_probs=78.5
Q ss_pred HhhhccCCCCCcceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhhcc---cchhh-ccccccCCCC-Ccc
Q 006662 466 SVDYQLAQPGRYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERGL---IGTYQ-NWCEAMSTYP-RTY 540 (636)
Q Consensus 466 ~~~~~l~~~~~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRgl---i~~~~-~~ce~~~~yp-~t~ 540 (636)
.++..+.. ....+|||+|||.|.++.+|++.+.- +|+.+|.++.++..+.++.- +.... |. +.++ +| .+|
T Consensus 35 ~l~~~~~~-~~~~~vLD~GcG~G~~~~~l~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~-~~~~-~~~~~f 109 (253)
T 3g5l_A 35 ELKKMLPD-FNQKTVLDLGCGFGWHCIYAAEHGAK--KVLGIDLSERMLTEAKRKTTSPVVCYEQKAI-EDIA-IEPDAY 109 (253)
T ss_dssp HHHTTCCC-CTTCEEEEETCTTCHHHHHHHHTTCS--EEEEEESCHHHHHHHHHHCCCTTEEEEECCG-GGCC-CCTTCE
T ss_pred HHHHhhhc-cCCCEEEEECCCCCHHHHHHHHcCCC--EEEEEECCHHHHHHHHHhhccCCeEEEEcch-hhCC-CCCCCe
Confidence 33433443 45789999999999999999887542 66777887789998888753 22221 22 2232 44 899
Q ss_pred ceeeeccccccCCCCcCHHHHHHHHhhcccCCcEEEEEe
Q 006662 541 DLIHADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRD 579 (636)
Q Consensus 541 Dl~H~~~~fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d 579 (636)
|+|.+.++|... -+...+|-++-|+|||||.+++..
T Consensus 110 D~v~~~~~l~~~---~~~~~~l~~~~~~LkpgG~l~~~~ 145 (253)
T 3g5l_A 110 NVVLSSLALHYI---ASFDDICKKVYINLKSSGSFIFSV 145 (253)
T ss_dssp EEEEEESCGGGC---SCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEEchhhhhh---hhHHHHHHHHHHHcCCCcEEEEEe
Confidence 999998888765 356899999999999999999973
No 264
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=98.60 E-value=3.9e-08 Score=98.11 Aligned_cols=95 Identities=14% Similarity=0.202 Sum_probs=71.9
Q ss_pred cceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhh----cc---cchhh-ccccccCCCC-Cccceeeecc
Q 006662 477 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GL---IGTYQ-NWCEAMSTYP-RTYDLIHADS 547 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl---i~~~~-~~ce~~~~yp-~t~Dl~H~~~ 547 (636)
..+|||+|||.|.++..|++..- -.|+.+|.++.++..+.++ |+ +-+++ |+ +.++ +| .+||+|++.+
T Consensus 47 ~~~vLDiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~-~~~~-~~~~~fD~v~~~~ 122 (257)
T 3f4k_A 47 DAKIADIGCGTGGQTLFLADYVK--GQITGIDLFPDFIEIFNENAVKANCADRVKGITGSM-DNLP-FQNEELDLIWSEG 122 (257)
T ss_dssp TCEEEEETCTTSHHHHHHHHHCC--SEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCT-TSCS-SCTTCEEEEEEES
T ss_pred CCeEEEeCCCCCHHHHHHHHhCC--CeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECCh-hhCC-CCCCCEEEEEecC
Confidence 56999999999999999987631 1667777777788877665 44 22222 32 2332 33 8999999988
Q ss_pred ccccCCCCcCHHHHHHHHhhcccCCcEEEEEe
Q 006662 548 IFSLYKDRCEMEDVLLEMDRILRPEGSVIIRD 579 (636)
Q Consensus 548 ~fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d 579 (636)
++... +.+.+|-++-|+|||||++++.+
T Consensus 123 ~l~~~----~~~~~l~~~~~~L~pgG~l~~~~ 150 (257)
T 3f4k_A 123 AIYNI----GFERGMNEWSKYLKKGGFIAVSE 150 (257)
T ss_dssp CSCCC----CHHHHHHHHHTTEEEEEEEEEEE
T ss_pred hHhhc----CHHHHHHHHHHHcCCCcEEEEEE
Confidence 87654 57899999999999999999986
No 265
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=98.60 E-value=4.4e-08 Score=97.42 Aligned_cols=98 Identities=20% Similarity=0.340 Sum_probs=73.5
Q ss_pred CCcceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhh----cc--cchhhccccccCCCC-Cccceeeecc
Q 006662 475 GRYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GL--IGTYQNWCEAMSTYP-RTYDLIHADS 547 (636)
Q Consensus 475 ~~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl--i~~~~~~ce~~~~yp-~t~Dl~H~~~ 547 (636)
....+|||+|||.|.++.+|++..- +|+.+|.++.++..+.++ |+ +-+.+.=.+.+ +++ .+||+|.+..
T Consensus 20 ~~~~~vLDiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~-~~~~~~fD~v~~~~ 95 (239)
T 1xxl_A 20 RAEHRVLDIGAGAGHTALAFSPYVQ---ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESL-PFPDDSFDIITCRY 95 (239)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGGSS---EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBC-CSCTTCEEEEEEES
T ss_pred CCCCEEEEEccCcCHHHHHHHHhCC---EEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccC-CCCCCcEEEEEECC
Confidence 4477999999999999999988743 677778877888877665 43 22222111333 244 8999999987
Q ss_pred ccccCCCCcCHHHHHHHHhhcccCCcEEEEEe
Q 006662 548 IFSLYKDRCEMEDVLLEMDRILRPEGSVIIRD 579 (636)
Q Consensus 548 ~fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d 579 (636)
++.... +.+.+|.|+.|+|||||++++.+
T Consensus 96 ~l~~~~---~~~~~l~~~~~~LkpgG~l~~~~ 124 (239)
T 1xxl_A 96 AAHHFS---DVRKAVREVARVLKQDGRFLLVD 124 (239)
T ss_dssp CGGGCS---CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred chhhcc---CHHHHHHHHHHHcCCCcEEEEEE
Confidence 776553 56899999999999999999975
No 266
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=98.60 E-value=1.2e-07 Score=94.59 Aligned_cols=142 Identities=9% Similarity=0.032 Sum_probs=93.3
Q ss_pred CCcceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhhcc--------------------------------
Q 006662 475 GRYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERGL-------------------------------- 522 (636)
Q Consensus 475 ~~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRgl-------------------------------- 522 (636)
....+|||+|||.|.++..|++... .+|+.+|.++.++..+.++--
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 132 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLSACESF--TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKL 132 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTTGGGTE--EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHH
T ss_pred cCCCEEEEECCCccHHHHHHhhccc--CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHh
Confidence 4467999999999999999988765 577888888788888765421
Q ss_pred ---c-chhh-ccccccCC-CC---CccceeeeccccccCC-CCcCHHHHHHHHhhcccCCcEEEEEeCHH----------
Q 006662 523 ---I-GTYQ-NWCEAMST-YP---RTYDLIHADSIFSLYK-DRCEMEDVLLEMDRILRPEGSVIIRDDVD---------- 582 (636)
Q Consensus 523 ---i-~~~~-~~ce~~~~-yp---~t~Dl~H~~~~fs~~~-~~c~~~~~l~e~dRiLrPgG~~i~~d~~~---------- 582 (636)
+ ..++ |..+ ..+ -+ .+||+|.+..++.... +.-+...+|-++-|+|||||++|+.+...
T Consensus 133 ~~~v~~~~~~d~~~-~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~ 211 (265)
T 2i62_A 133 RRAIKQVLKCDVTQ-SQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALKSSYYMIGEQK 211 (265)
T ss_dssp HHHEEEEEECCTTS-SSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEE
T ss_pred hhhheeEEEeeecc-CCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCCCceEEcCCcc
Confidence 2 2221 2222 222 23 7999999987776322 12245789999999999999999976211
Q ss_pred ------HHHHHHHHHhcCCCceEEeccCCC-------CCCcceEEEEEec
Q 006662 583 ------ILVKIKSITDGMEWEGRIADHENG-------PRQREKILFANKK 619 (636)
Q Consensus 583 ------~~~~~~~~~~~~~W~~~~~~~e~~-------~~~~~~~l~~~K~ 619 (636)
..+.+.++++...+++........ .....-+++++|+
T Consensus 212 ~~~~~~~~~~~~~~l~~aGf~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~ 261 (265)
T 2i62_A 212 FSSLPLGWETVRDAVEEAGYTIEQFEVISQNYSSTTSNNEGLFSLVGRKP 261 (265)
T ss_dssp EECCCCCHHHHHHHHHHTTCEEEEEEEECCCCCTTTBCCCCEEEEEEECC
T ss_pred ccccccCHHHHHHHHHHCCCEEEEEEEecccCCccccccceEEEEEeccc
Confidence 234777777777777654332211 1113446777774
No 267
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=98.60 E-value=1.3e-07 Score=101.74 Aligned_cols=99 Identities=13% Similarity=0.055 Sum_probs=71.3
Q ss_pred cEEEEeCCCCcHHHHHHhhcCC-EEEEcCcCCchHHHHHHHHHc----CC---CeEEEEecccc-CCC---CCCCeeEEE
Q 006662 220 RTAIDTGCGVASWGAYLMSRNI-LAVSFAPRDTHEAQVQFALER----GV---PALIGVMASIR-LPY---PSRAFDMAH 287 (636)
Q Consensus 220 r~VLDIGCGtG~~a~~La~~~v-~vv~i~p~Dis~a~l~~A~er----g~---~~~~~~~d~~~-Lpf---~~~sFDlV~ 287 (636)
.+|||+|||+|.++..+++.+. .++++ |+++.+++.|+++ +. ++.+..+|... ++. ...+||+|+
T Consensus 214 ~~VLDl~cGtG~~sl~la~~ga~~V~~v---D~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii 290 (385)
T 2b78_A 214 KTVLNLFSYTAAFSVAAAMGGAMATTSV---DLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIII 290 (385)
T ss_dssp CEEEEETCTTTHHHHHHHHTTBSEEEEE---ESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred CeEEEEeeccCHHHHHHHHCCCCEEEEE---ECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEEE
Confidence 3899999999999999998764 55666 7777787777643 43 57888888655 221 245899999
Q ss_pred eccccc----ccccCh----HHHHHHHHhcccCCcEEEEEeC
Q 006662 288 CSRCLI----PWGQYD----GLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 288 ~s~~L~----h~~~d~----~~~L~el~RvLKPGG~Liis~p 321 (636)
+..... ....+. ..++.++.++|+|||+++++..
T Consensus 291 ~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~ 332 (385)
T 2b78_A 291 IDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTN 332 (385)
T ss_dssp ECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred ECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 854331 111122 3577888999999999999975
No 268
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=98.59 E-value=5.8e-08 Score=94.47 Aligned_cols=135 Identities=16% Similarity=0.123 Sum_probs=93.9
Q ss_pred CCcceEeeecccchhhhhhhcCCC--eEEEEecCCCCCccchHHHHhh----cc--cchhh-ccccccCCCC-Cccceee
Q 006662 475 GRYRNLLDMNAYLGGFAAALVDDP--LWVMNTVPVEAKINTLGVIYER----GL--IGTYQ-NWCEAMSTYP-RTYDLIH 544 (636)
Q Consensus 475 ~~~r~vlD~~~g~ggfaa~l~~~~--v~~mnv~~~~~~~~~l~~~~eR----gl--i~~~~-~~ce~~~~yp-~t~Dl~H 544 (636)
....+|||+|||.|.++.+|++.. - ..|+.+|.++.++..+.++ |+ +-... |. +.+. ++ .+||+|.
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~-~~~~-~~~~~fD~v~ 111 (219)
T 3dh0_A 36 KEGMTVLDVGTGAGFYLPYLSKMVGEK--GKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEE-NKIP-LPDNTVDFIF 111 (219)
T ss_dssp CTTCEEEESSCTTCTTHHHHHHHHTTT--CEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBT-TBCS-SCSSCEEEEE
T ss_pred CCCCEEEEEecCCCHHHHHHHHHhCCC--cEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeccc-ccCC-CCCCCeeEEE
Confidence 336689999999999999997652 1 1456667766788777766 32 22222 22 2222 44 7899999
Q ss_pred eccccccCCCCcCHHHHHHHHhhcccCCcEEEEEeCH-------------HHHHHHHHHHhcCCCceEEeccCCCCCCcc
Q 006662 545 ADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDDV-------------DILVKIKSITDGMEWEGRIADHENGPRQRE 611 (636)
Q Consensus 545 ~~~~fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~~-------------~~~~~~~~~~~~~~W~~~~~~~e~~~~~~~ 611 (636)
+.++|.... +...+|-|+-|+|||||.+++.+.. -....+.++++...++......- + ...
T Consensus 112 ~~~~l~~~~---~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~-~--~~~ 185 (219)
T 3dh0_A 112 MAFTFHELS---EPLKFLEELKRVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILEDAGIRVGRVVEV-G--KYC 185 (219)
T ss_dssp EESCGGGCS---SHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHHTTCEEEEEEEE-T--TTE
T ss_pred eehhhhhcC---CHHHHHHHHHHHhCCCeEEEEEEecccccccCCchhcccCHHHHHHHHHHCCCEEEEEEee-C--Cce
Confidence 988887654 4689999999999999999998521 13577888888888886543222 1 256
Q ss_pred eEEEEEec
Q 006662 612 KILFANKK 619 (636)
Q Consensus 612 ~~l~~~K~ 619 (636)
.+++++|+
T Consensus 186 ~~~~~~k~ 193 (219)
T 3dh0_A 186 FGVYAMIV 193 (219)
T ss_dssp EEEEEECC
T ss_pred EEEEEEec
Confidence 77888885
No 269
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=98.59 E-value=9.6e-08 Score=95.58 Aligned_cols=94 Identities=11% Similarity=0.045 Sum_probs=72.1
Q ss_pred cEEEEeCCCCcHHHHHHhhc---CCEEEEcCcCCchHHHHHHHHHc----CC--CeEEEEeccccC-C-C-----CCCCe
Q 006662 220 RTAIDTGCGVASWGAYLMSR---NILAVSFAPRDTHEAQVQFALER----GV--PALIGVMASIRL-P-Y-----PSRAF 283 (636)
Q Consensus 220 r~VLDIGCGtG~~a~~La~~---~v~vv~i~p~Dis~a~l~~A~er----g~--~~~~~~~d~~~L-p-f-----~~~sF 283 (636)
.+|||||||+|..+..+++. +..++.+ |+++.+++.|+++ +. .+.+..+|.... + + +.++|
T Consensus 72 ~~VLeiG~G~G~~~~~la~~~~~~~~v~~i---D~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~f 148 (237)
T 3c3y_A 72 KKTIEVGVFTGYSLLLTALSIPDDGKITAI---DFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGSY 148 (237)
T ss_dssp CEEEEECCTTSHHHHHHHHHSCTTCEEEEE---ESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCE
T ss_pred CEEEEeCCCCCHHHHHHHHhCCCCCEEEEE---ECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCc
Confidence 38999999999999999986 5566667 8888888888644 43 367777776442 2 2 25789
Q ss_pred eEEEecccccccccChHHHHHHHHhcccCCcEEEEEe
Q 006662 284 DMAHCSRCLIPWGQYDGLYLIEVDRVLRPGGYWILSG 320 (636)
Q Consensus 284 DlV~~s~~L~h~~~d~~~~L~el~RvLKPGG~Liis~ 320 (636)
|+|++.. ...+...+++++.++|||||++++..
T Consensus 149 D~I~~d~----~~~~~~~~l~~~~~~L~pGG~lv~d~ 181 (237)
T 3c3y_A 149 DFGFVDA----DKPNYIKYHERLMKLVKVGGIVAYDN 181 (237)
T ss_dssp EEEEECS----CGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred CEEEECC----chHHHHHHHHHHHHhcCCCeEEEEec
Confidence 9999853 23344789999999999999999874
No 270
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=98.59 E-value=4.8e-08 Score=100.01 Aligned_cols=96 Identities=27% Similarity=0.306 Sum_probs=72.8
Q ss_pred CcceEeeecccchhhhhhhcCC-CeEEEEecCCCCCccchHHHHhh----cc---cchhh-ccccccCCCC-Cccceeee
Q 006662 476 RYRNLLDMNAYLGGFAAALVDD-PLWVMNTVPVEAKINTLGVIYER----GL---IGTYQ-NWCEAMSTYP-RTYDLIHA 545 (636)
Q Consensus 476 ~~r~vlD~~~g~ggfaa~l~~~-~v~~mnv~~~~~~~~~l~~~~eR----gl---i~~~~-~~ce~~~~yp-~t~Dl~H~ 545 (636)
...+|||+|||.|.++..|++. +. +|+.+|.++.++..+.++ |+ +...+ |. +.+ ++| .+||+|.+
T Consensus 82 ~~~~vLDiGcG~G~~~~~l~~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~-~~~-~~~~~~fD~v~~ 156 (297)
T 2o57_A 82 RQAKGLDLGAGYGGAARFLVRKFGV---SIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSF-LEI-PCEDNSYDFIWS 156 (297)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCC---EEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCT-TSC-SSCTTCEEEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhCC---EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCc-ccC-CCCCCCEeEEEe
Confidence 3679999999999999999876 54 667777777888877665 43 22222 22 122 344 79999999
Q ss_pred ccccccCCCCcCHHHHHHHHhhcccCCcEEEEEe
Q 006662 546 DSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRD 579 (636)
Q Consensus 546 ~~~fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d 579 (636)
.+++....+ ...+|-|+-|+|||||.+++.+
T Consensus 157 ~~~l~~~~~---~~~~l~~~~~~LkpgG~l~~~~ 187 (297)
T 2o57_A 157 QDAFLHSPD---KLKVFQECARVLKPRGVMAITD 187 (297)
T ss_dssp ESCGGGCSC---HHHHHHHHHHHEEEEEEEEEEE
T ss_pred cchhhhcCC---HHHHHHHHHHHcCCCeEEEEEE
Confidence 888876654 6899999999999999999985
No 271
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=98.59 E-value=6.6e-08 Score=92.80 Aligned_cols=142 Identities=10% Similarity=0.018 Sum_probs=96.0
Q ss_pred cceEeeecccchhhhhhhcCC--CeEEEEecCCCCCccchHHHHhh----cc---cchhhccccccC-CCCCccceeeec
Q 006662 477 YRNLLDMNAYLGGFAAALVDD--PLWVMNTVPVEAKINTLGVIYER----GL---IGTYQNWCEAMS-TYPRTYDLIHAD 546 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~~--~v~~mnv~~~~~~~~~l~~~~eR----gl---i~~~~~~ce~~~-~yp~t~Dl~H~~ 546 (636)
..+|||+|||.|.++.+|++. +- -+|+.+|.++.++..+.++ |+ +-+++.=.+.+. ..+.+||+|-++
T Consensus 23 ~~~vLDlGcG~G~~~~~l~~~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~ 100 (197)
T 3eey_A 23 GDTVVDATCGNGNDTAFLASLVGEN--GRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVMFN 100 (197)
T ss_dssp TCEEEESCCTTSHHHHHHHHHHCTT--CEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEEEE
T ss_pred CCEEEEcCCCCCHHHHHHHHHhCCC--CEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEEEc
Confidence 458999999999999998775 22 1566778777888887766 33 333331123344 335899999987
Q ss_pred ccc-ccC-----CCCcCHHHHHHHHhhcccCCcEEEEEe------CHHHHHHHHHHHhcCC---CceEEeccCCCCCCcc
Q 006662 547 SIF-SLY-----KDRCEMEDVLLEMDRILRPEGSVIIRD------DVDILVKIKSITDGME---WEGRIADHENGPRQRE 611 (636)
Q Consensus 547 ~~f-s~~-----~~~c~~~~~l~e~dRiLrPgG~~i~~d------~~~~~~~~~~~~~~~~---W~~~~~~~e~~~~~~~ 611 (636)
..| ... ...-+...+|.++-|+|||||.+++.+ ..+....+.+.++.+. |.+.....-+.+..+.
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~~~~~~~~~~~pp 180 (197)
T 3eey_A 101 LGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYYGGDTGFEEKEKVLEFLKGVDQKKFIVQRTDFINQANCPP 180 (197)
T ss_dssp ESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECCBTTTBSHHHHHHHHHHTTSCTTTEEEEEEEETTCCSCCC
T ss_pred CCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEccCCCCcHHHHHHHHHHHHhCCCCcEEEEEEEeccCccCCC
Confidence 554 110 111123479999999999999999975 1234566666666655 8887766666666678
Q ss_pred eEEEEEecC
Q 006662 612 KILFANKKY 620 (636)
Q Consensus 612 ~~l~~~K~~ 620 (636)
.++|.+|..
T Consensus 181 ~~~~~~~~~ 189 (197)
T 3eey_A 181 ILVCIEKIS 189 (197)
T ss_dssp EEEEEEECC
T ss_pred eEEEEEEcc
Confidence 888888854
No 272
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.59 E-value=9.5e-08 Score=93.61 Aligned_cols=110 Identities=17% Similarity=0.184 Sum_probs=80.6
Q ss_pred cceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhhcccchhh-ccccccCCCC-CccceeeeccccccCCC
Q 006662 477 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERGLIGTYQ-NWCEAMSTYP-RTYDLIHADSIFSLYKD 554 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRgli~~~~-~~ce~~~~yp-~t~Dl~H~~~~fs~~~~ 554 (636)
..+|||+|||.|.++..|.+. +.+|.++.++..+.++++ .++. |. +.+ +++ .+||+|.+.+++....
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~-------~~vD~s~~~~~~a~~~~~-~~~~~d~-~~~-~~~~~~fD~v~~~~~l~~~~- 116 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK-------IGVEPSERMAEIARKRGV-FVLKGTA-ENL-PLKDESFDFALMVTTICFVD- 116 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC-------EEEESCHHHHHHHHHTTC-EEEECBT-TBC-CSCTTCEEEEEEESCGGGSS-
T ss_pred CCcEEEeCCCCCHHHHHHHHH-------hccCCCHHHHHHHHhcCC-EEEEccc-ccC-CCCCCCeeEEEEcchHhhcc-
Confidence 568999999999999999887 445666688899988854 2222 22 222 244 7999999988876543
Q ss_pred CcCHHHHHHHHhhcccCCcEEEEEeCHH------------------------HHHHHHHHHhcCCCceE
Q 006662 555 RCEMEDVLLEMDRILRPEGSVIIRDDVD------------------------ILVKIKSITDGMEWEGR 599 (636)
Q Consensus 555 ~c~~~~~l~e~dRiLrPgG~~i~~d~~~------------------------~~~~~~~~~~~~~W~~~ 599 (636)
+...+|.++-|+|+|||.+++.+... ....++++++...++..
T Consensus 117 --~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~ 183 (219)
T 1vlm_A 117 --DPERALKEAYRILKKGGYLIVGIVDRESFLGREYEKNKEKSVFYKNARFFSTEELMDLMRKAGFEEF 183 (219)
T ss_dssp --CHHHHHHHHHHHEEEEEEEEEEEECSSSHHHHHHHHTTTC-CCSTTCCCCCHHHHHHHHHHTTCEEE
T ss_pred --CHHHHHHHHHHHcCCCcEEEEEEeCCccHHHHHHHHHhcCcchhcccccCCHHHHHHHHHHCCCeEE
Confidence 46899999999999999999974210 23566677777777664
No 273
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=98.59 E-value=5.5e-08 Score=99.06 Aligned_cols=107 Identities=14% Similarity=0.155 Sum_probs=78.9
Q ss_pred HhhhccCCCCCcceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhh----cc---cchhhccccccCCC-C
Q 006662 466 SVDYQLAQPGRYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GL---IGTYQNWCEAMSTY-P 537 (636)
Q Consensus 466 ~~~~~l~~~~~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl---i~~~~~~ce~~~~y-p 537 (636)
.++..+.. . ..+|||+|||.|.++..|++.+. +|+.+|.++.++..+.++ |+ +..++.=.+.+..+ +
T Consensus 60 ~~l~~~~~-~-~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 134 (285)
T 4htf_A 60 RVLAEMGP-Q-KLRVLDAGGGEGQTAIKMAERGH---QVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLE 134 (285)
T ss_dssp HHHHHTCS-S-CCEEEEETCTTCHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCS
T ss_pred HHHHhcCC-C-CCEEEEeCCcchHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcC
Confidence 44444444 2 46899999999999999998854 567777777888888776 44 22333112334434 4
Q ss_pred CccceeeeccccccCCCCcCHHHHHHHHhhcccCCcEEEEEeC
Q 006662 538 RTYDLIHADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDD 580 (636)
Q Consensus 538 ~t~Dl~H~~~~fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~ 580 (636)
.+||+|.+.+++.... +...+|-|+.|+|||||.+++.+.
T Consensus 135 ~~fD~v~~~~~l~~~~---~~~~~l~~~~~~LkpgG~l~~~~~ 174 (285)
T 4htf_A 135 TPVDLILFHAVLEWVA---DPRSVLQTLWSVLRPGGVLSLMFY 174 (285)
T ss_dssp SCEEEEEEESCGGGCS---CHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CCceEEEECchhhccc---CHHHHHHHHHHHcCCCeEEEEEEe
Confidence 8999999988887654 458999999999999999999863
No 274
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=98.58 E-value=6.1e-08 Score=98.55 Aligned_cols=97 Identities=9% Similarity=0.139 Sum_probs=73.3
Q ss_pred CCcceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhhcc-cchhh-ccccccCCCCCccceeeeccccccC
Q 006662 475 GRYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERGL-IGTYQ-NWCEAMSTYPRTYDLIHADSIFSLY 552 (636)
Q Consensus 475 ~~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRgl-i~~~~-~~ce~~~~yp~t~Dl~H~~~~fs~~ 552 (636)
....+|||+|||.|.++.+|++.+. +|+.+|.++.++..+.++.- +.... |. +.+ +++.+||+|++..+|...
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~d~-~~~-~~~~~fD~v~~~~~l~~~ 130 (279)
T 3ccf_A 56 QPGEFILDLGCGTGQLTEKIAQSGA---EVLGTDNAATMIEKARQNYPHLHFDVADA-RNF-RVDKPLDAVFSNAMLHWV 130 (279)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHCTTSCEEECCT-TTC-CCSSCEEEEEEESCGGGC
T ss_pred CCCCEEEEecCCCCHHHHHHHhCCC---eEEEEECCHHHHHHHHhhCCCCEEEECCh-hhC-CcCCCcCEEEEcchhhhC
Confidence 3467999999999999999988543 66777777788988887731 11221 22 222 247899999998877654
Q ss_pred CCCcCHHHHHHHHhhcccCCcEEEEEe
Q 006662 553 KDRCEMEDVLLEMDRILRPEGSVIIRD 579 (636)
Q Consensus 553 ~~~c~~~~~l~e~dRiLrPgG~~i~~d 579 (636)
. +.+.+|.|+-|+|||||++++..
T Consensus 131 ~---d~~~~l~~~~~~LkpgG~l~~~~ 154 (279)
T 3ccf_A 131 K---EPEAAIASIHQALKSGGRFVAEF 154 (279)
T ss_dssp S---CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred c---CHHHHHHHHHHhcCCCcEEEEEe
Confidence 3 56899999999999999999974
No 275
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=98.58 E-value=1.2e-07 Score=98.45 Aligned_cols=134 Identities=15% Similarity=0.166 Sum_probs=91.9
Q ss_pred CcceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhh--cccc----hhhccccccCCCC-Cccceeeeccc
Q 006662 476 RYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER--GLIG----TYQNWCEAMSTYP-RTYDLIHADSI 548 (636)
Q Consensus 476 ~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR--gli~----~~~~~ce~~~~yp-~t~Dl~H~~~~ 548 (636)
..++|||+|||+|+|+..|++.+. -.|+.+|.+++||...+.+ .++. -..... ...+| .+||++-++-.
T Consensus 85 ~g~~vLDiGcGTG~~t~~L~~~ga--~~V~aVDvs~~mL~~a~r~~~rv~~~~~~ni~~l~--~~~l~~~~fD~v~~d~s 160 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVMLQNGA--KLVYAVDVGTNQLVWKLRQDDRVRSMEQYNFRYAE--PVDFTEGLPSFASIDVS 160 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTC--SEEEEECSSSSCSCHHHHTCTTEEEECSCCGGGCC--GGGCTTCCCSEEEECCS
T ss_pred cccEEEecCCCccHHHHHHHhCCC--CEEEEEECCHHHHHHHHHhCcccceecccCceecc--hhhCCCCCCCEEEEEee
Confidence 467999999999999999988753 3566778887899886542 1111 111111 12245 45999999877
Q ss_pred cccCCCCcCHHHHHHHHhhcccCCcEEEEEeC----------------------HHHHHHHHHHHhcCCCceEEec--cC
Q 006662 549 FSLYKDRCEMEDVLLEMDRILRPEGSVIIRDD----------------------VDILVKIKSITDGMEWEGRIAD--HE 604 (636)
Q Consensus 549 fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~----------------------~~~~~~~~~~~~~~~W~~~~~~--~e 604 (636)
|. .+..+|-|+.|+|||||.+++-.. ...+.++.+.+....|.+.-.+ .-
T Consensus 161 f~------sl~~vL~e~~rvLkpGG~lv~lvkPqfe~~~~~~~~~G~vrd~~~~~~~~~~v~~~~~~~Gf~v~~~~~spi 234 (291)
T 3hp7_A 161 FI------SLNLILPALAKILVDGGQVVALVKPQFEAGREQIGKNGIVRESSIHEKVLETVTAFAVDYGFSVKGLDFSPI 234 (291)
T ss_dssp SS------CGGGTHHHHHHHSCTTCEEEEEECGGGTSCGGGCC-CCCCCCHHHHHHHHHHHHHHHHHTTEEEEEEEECSS
T ss_pred Hh------hHHHHHHHHHHHcCcCCEEEEEECcccccChhhcCCCCccCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCC
Confidence 75 348899999999999999988611 1256778888888999876443 22
Q ss_pred CCCC-CcceEEEEEec
Q 006662 605 NGPR-QREKILFANKK 619 (636)
Q Consensus 605 ~~~~-~~~~~l~~~K~ 619 (636)
.|+. +.|-++.++|.
T Consensus 235 ~g~~gn~e~l~~~~~~ 250 (291)
T 3hp7_A 235 QGGHGNIEFLAHLEKT 250 (291)
T ss_dssp CCGGGCCCEEEEEEEC
T ss_pred CCCCcCHHHHHHhhhc
Confidence 3333 45777777663
No 276
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=98.58 E-value=1.1e-07 Score=97.97 Aligned_cols=97 Identities=12% Similarity=0.132 Sum_probs=71.7
Q ss_pred CcEEEEeCCCCcHHHHHHhhcC-CEEEEcCcCCchHHHHHHHHHcC---------------CCeEEEEecccc-CCCCCC
Q 006662 219 IRTAIDTGCGVASWGAYLMSRN-ILAVSFAPRDTHEAQVQFALERG---------------VPALIGVMASIR-LPYPSR 281 (636)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~~-v~vv~i~p~Dis~a~l~~A~erg---------------~~~~~~~~d~~~-Lpf~~~ 281 (636)
+.+|||||||+|.++..+++++ ..++.+ |+++.+++.|+++. ..+.+...|... ++. ++
T Consensus 76 ~~~VLdiG~G~G~~~~~l~~~~~~~v~~v---Did~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~~ 151 (281)
T 1mjf_A 76 PKRVLVIGGGDGGTVREVLQHDVDEVIMV---EIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-NR 151 (281)
T ss_dssp CCEEEEEECTTSHHHHHHTTSCCSEEEEE---ESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-CC
T ss_pred CCeEEEEcCCcCHHHHHHHhCCCCEEEEE---ECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhcc-cC
Confidence 3589999999999999999884 345555 88999999887652 246777777543 222 57
Q ss_pred CeeEEEecccccccccC----hHHHHHHHHhcccCCcEEEEEe
Q 006662 282 AFDMAHCSRCLIPWGQY----DGLYLIEVDRVLRPGGYWILSG 320 (636)
Q Consensus 282 sFDlV~~s~~L~h~~~d----~~~~L~el~RvLKPGG~Liis~ 320 (636)
+||+|++.... ++... ...+++++.++|+|||.+++..
T Consensus 152 ~fD~Ii~d~~~-~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 193 (281)
T 1mjf_A 152 GFDVIIADSTD-PVGPAKVLFSEEFYRYVYDALNNPGIYVTQA 193 (281)
T ss_dssp CEEEEEEECCC-CC-----TTSHHHHHHHHHHEEEEEEEEEEE
T ss_pred CeeEEEECCCC-CCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 89999986543 33211 2678999999999999999974
No 277
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=98.58 E-value=1.3e-07 Score=88.73 Aligned_cols=116 Identities=16% Similarity=0.110 Sum_probs=82.4
Q ss_pred CCcceEeeecccchhhhhhhcCC-CeEEEEecCCCCCccchHHHHhh----ccc-c-hhh-ccccccCCCCCccceeeec
Q 006662 475 GRYRNLLDMNAYLGGFAAALVDD-PLWVMNTVPVEAKINTLGVIYER----GLI-G-TYQ-NWCEAMSTYPRTYDLIHAD 546 (636)
Q Consensus 475 ~~~r~vlD~~~g~ggfaa~l~~~-~v~~mnv~~~~~~~~~l~~~~eR----gli-~-~~~-~~ce~~~~yp~t~Dl~H~~ 546 (636)
....+|||+|||.|.++.+|++. +- ..|+.+|.++.++..+.++ |+- . .++ |..+.+...+.+||+|.+.
T Consensus 24 ~~~~~vldiG~G~G~~~~~l~~~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~i~~~ 101 (178)
T 3hm2_A 24 KPHETLWDIGGGSGSIAIEWLRSTPQ--TTAVCFEISEERRERILSNAINLGVSDRIAVQQGAPRAFDDVPDNPDVIFIG 101 (178)
T ss_dssp CTTEEEEEESTTTTHHHHHHHTTSSS--EEEEEECSCHHHHHHHHHHHHTTTCTTSEEEECCTTGGGGGCCSCCSEEEEC
T ss_pred cCCCeEEEeCCCCCHHHHHHHHHCCC--CeEEEEeCCHHHHHHHHHHHHHhCCCCCEEEecchHhhhhccCCCCCEEEEC
Confidence 34679999999999999999876 22 3566777777788888765 442 1 222 3334444333789999987
Q ss_pred cccccCCCCcCHHHHHHHHhhcccCCcEEEEEeC-HHHHHHHHHHHhcCCCceE
Q 006662 547 SIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDD-VDILVKIKSITDGMEWEGR 599 (636)
Q Consensus 547 ~~fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~-~~~~~~~~~~~~~~~W~~~ 599 (636)
+.+.. ..+|-++.|+|||||.+++.+. .+....+.++.+...+++.
T Consensus 102 ~~~~~-------~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (178)
T 3hm2_A 102 GGLTA-------PGVFAAAWKRLPVGGRLVANAVTVESEQMLWALRKQFGGTIS 148 (178)
T ss_dssp C-TTC-------TTHHHHHHHTCCTTCEEEEEECSHHHHHHHHHHHHHHCCEEE
T ss_pred CcccH-------HHHHHHHHHhcCCCCEEEEEeeccccHHHHHHHHHHcCCeeE
Confidence 66643 6799999999999999999864 4556666677666666554
No 278
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=98.58 E-value=2.5e-08 Score=101.75 Aligned_cols=103 Identities=8% Similarity=0.112 Sum_probs=74.1
Q ss_pred cceEeeecccchhhhhhhcCC-CeEEEEecCCCCCccchHHHHhh----cccchhhccccccCCCC-Cccceeeeccccc
Q 006662 477 YRNLLDMNAYLGGFAAALVDD-PLWVMNTVPVEAKINTLGVIYER----GLIGTYQNWCEAMSTYP-RTYDLIHADSIFS 550 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~~-~v~~mnv~~~~~~~~~l~~~~eR----gli~~~~~~ce~~~~yp-~t~Dl~H~~~~fs 550 (636)
..+|||+|||+|.++.+|++. +---.+|+.+|.++.+++.+.+| |+..-+.-.|..+..+| ..||+|.+..++.
T Consensus 71 ~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~~~~d~v~~~~~l~ 150 (261)
T 4gek_A 71 GTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAIENASMVVLNFTLQ 150 (261)
T ss_dssp TCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCCCSEEEEEEESCGG
T ss_pred CCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccccccccccceeeeeee
Confidence 468999999999999888754 10112567788888999998876 44332333345566676 7799998876655
Q ss_pred cCCCCcCHHHHHHHHhhcccCCcEEEEEeC
Q 006662 551 LYKDRCEMEDVLLEMDRILRPEGSVIIRDD 580 (636)
Q Consensus 551 ~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~ 580 (636)
... .-+...+|-|+-|+|||||.+|++|.
T Consensus 151 ~~~-~~~~~~~l~~i~~~LkpGG~lii~e~ 179 (261)
T 4gek_A 151 FLE-PSERQALLDKIYQGLNPGGALVLSEK 179 (261)
T ss_dssp GSC-HHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ecC-chhHhHHHHHHHHHcCCCcEEEEEec
Confidence 432 22346799999999999999999863
No 279
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=98.58 E-value=2.9e-08 Score=98.59 Aligned_cols=123 Identities=17% Similarity=0.181 Sum_probs=87.2
Q ss_pred CcceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhhcc------cchhh-ccccccCCCCCccceeeeccc
Q 006662 476 RYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERGL------IGTYQ-NWCEAMSTYPRTYDLIHADSI 548 (636)
Q Consensus 476 ~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRgl------i~~~~-~~ce~~~~yp~t~Dl~H~~~~ 548 (636)
...+|||+|||.|.++.+|++.. ..+|+.+|.++.++..+.++.- +-.+. |+ +.+..-+.+||+|.+..+
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~ 155 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL--FREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGL-QDFTPEPDSYDVIWIQWV 155 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT--CSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCG-GGCCCCSSCEEEEEEESC
T ss_pred CCCEEEEECCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcCh-hhcCCCCCCEEEEEEcch
Confidence 46799999999999999998875 2356777877788888877642 11222 21 222222368999999887
Q ss_pred cccCCCCcCHHHHHHHHhhcccCCcEEEEEeCHH---------------HHHHHHHHHhcCCCceEEec
Q 006662 549 FSLYKDRCEMEDVLLEMDRILRPEGSVIIRDDVD---------------ILVKIKSITDGMEWEGRIAD 602 (636)
Q Consensus 549 fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~~~---------------~~~~~~~~~~~~~W~~~~~~ 602 (636)
+....+. .+..+|.++-|+|||||.+++.+... ....+.++++...++.....
T Consensus 156 l~~~~~~-~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~ 223 (241)
T 2ex4_A 156 IGHLTDQ-HLAEFLRRCKGSLRPNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRIICSAGLSLLAEE 223 (241)
T ss_dssp GGGSCHH-HHHHHHHHHHHHEEEEEEEEEEEEEBSSSEEEETTTTEEEEBHHHHHHHHHHTTCCEEEEE
T ss_pred hhhCCHH-HHHHHHHHHHHhcCCCeEEEEEEccCCCcceecccCCcccCCHHHHHHHHHHcCCeEEEee
Confidence 7654331 24689999999999999999976311 35678888888888776543
No 280
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=98.58 E-value=3.1e-07 Score=99.28 Aligned_cols=99 Identities=13% Similarity=0.029 Sum_probs=73.0
Q ss_pred cEEEEeCCCCcHHHHHHhhcCCEEEEcCcCCchHHHHHHHHHc----CCCeEEEEeccccC-CCCCCCeeEEEecccccc
Q 006662 220 RTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALER----GVPALIGVMASIRL-PYPSRAFDMAHCSRCLIP 294 (636)
Q Consensus 220 r~VLDIGCGtG~~a~~La~~~v~vv~i~p~Dis~a~l~~A~er----g~~~~~~~~d~~~L-pf~~~sFDlV~~s~~L~h 294 (636)
.+|||+|||+|.++..+++.+..++++ |+++.+++.|+++ +....+...|.... +...+.||+|++......
T Consensus 216 ~~VLDlg~GtG~~sl~~a~~ga~V~av---Dis~~al~~a~~n~~~ng~~~~~~~~D~~~~l~~~~~~fD~Ii~dpP~f~ 292 (393)
T 4dmg_A 216 ERVLDVYSYVGGFALRAARKGAYALAV---DKDLEALGVLDQAALRLGLRVDIRHGEALPTLRGLEGPFHHVLLDPPTLV 292 (393)
T ss_dssp CEEEEESCTTTHHHHHHHHTTCEEEEE---ESCHHHHHHHHHHHHHHTCCCEEEESCHHHHHHTCCCCEEEEEECCCCCC
T ss_pred CeEEEcccchhHHHHHHHHcCCeEEEE---ECCHHHHHHHHHHHHHhCCCCcEEEccHHHHHHHhcCCCCEEEECCCcCC
Confidence 399999999999999999988776677 9999999888654 55556667776553 222334999998643211
Q ss_pred c--------ccChHHHHHHHHhcccCCcEEEEEeC
Q 006662 295 W--------GQYDGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 295 ~--------~~d~~~~L~el~RvLKPGG~Liis~p 321 (636)
. ..+...++..+.++|||||+|++...
T Consensus 293 ~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~ 327 (393)
T 4dmg_A 293 KRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSC 327 (393)
T ss_dssp SSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 1 11224788999999999999997754
No 281
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=98.57 E-value=4.9e-07 Score=93.32 Aligned_cols=149 Identities=10% Similarity=0.086 Sum_probs=98.0
Q ss_pred CCceecCCCCCCCcccHHHHHHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhcC-CEEEEcCcCCchHHHHHHHHHc-
Q 006662 185 GDRFSFPGGGTMFPRGADAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRN-ILAVSFAPRDTHEAQVQFALER- 262 (636)
Q Consensus 185 g~~~~F~ggg~~f~~g~~~~id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~~-v~vv~i~p~Dis~a~l~~A~er- 262 (636)
|-.|.+--..++|-.+...-...+.+++ .+|. +|||+|||+|.++..+++++ ..++.+ |+++.+++.++++
T Consensus 96 G~~~~~D~~k~~f~~~~~~er~ri~~~~--~~g~--~VlD~~aG~G~~~i~~a~~g~~~V~av---D~np~a~~~~~~N~ 168 (278)
T 3k6r_A 96 GIKYKLDVAKIMFSPANVKERVRMAKVA--KPDE--LVVDMFAGIGHLSLPIAVYGKAKVIAI---EKDPYTFKFLVENI 168 (278)
T ss_dssp TEEEEEETTTSCCCGGGHHHHHHHHHHC--CTTC--EEEETTCTTTTTTHHHHHHTCCEEEEE---CCCHHHHHHHHHHH
T ss_pred CEEEEEeccceEEcCCcHHHHHHHHHhc--CCCC--EEEEecCcCcHHHHHHHHhcCCeEEEE---ECCHHHHHHHHHHH
Confidence 3334443344555555554445666654 4555 99999999999999999886 466666 8898888877644
Q ss_pred ---CC--CeEEEEeccccCCCCCCCeeEEEecccccccccChHHHHHHHHhcccCCcEEEEEeCCCCccccccCCCCchh
Q 006662 263 ---GV--PALIGVMASIRLPYPSRAFDMAHCSRCLIPWGQYDGLYLIEVDRVLRPGGYWILSGPPVNWESHWKGWNRTTE 337 (636)
Q Consensus 263 ---g~--~~~~~~~d~~~Lpf~~~sFDlV~~s~~L~h~~~d~~~~L~el~RvLKPGG~Liis~p~~~w~~~~~~W~~t~e 337 (636)
++ .+.+..+|...++ +.+.||.|+++.. .....++..+.++|||||++.+...... ..
T Consensus 169 ~~N~v~~~v~~~~~D~~~~~-~~~~~D~Vi~~~p-----~~~~~~l~~a~~~lk~gG~ih~~~~~~e-----------~~ 231 (278)
T 3k6r_A 169 HLNKVEDRMSAYNMDNRDFP-GENIADRILMGYV-----VRTHEFIPKALSIAKDGAIIHYHNTVPE-----------KL 231 (278)
T ss_dssp HHTTCTTTEEEECSCTTTCC-CCSCEEEEEECCC-----SSGGGGHHHHHHHEEEEEEEEEEEEEEG-----------GG
T ss_pred HHcCCCCcEEEEeCcHHHhc-cccCCCEEEECCC-----CcHHHHHHHHHHHcCCCCEEEEEeeecc-----------cc
Confidence 44 3677778877665 3578999987532 2335688889999999999877532100 00
Q ss_pred hhHHHHHHHHHHHHHhceEe
Q 006662 338 DLKSEQNGIETIARSLCWKK 357 (636)
Q Consensus 338 ~l~~~~~~ie~la~~l~Wk~ 357 (636)
......+.++++++..+++.
T Consensus 232 ~~~~~~e~i~~~~~~~g~~v 251 (278)
T 3k6r_A 232 MPREPFETFKRITKEYGYDV 251 (278)
T ss_dssp TTTTTHHHHHHHHHHTTCEE
T ss_pred cchhHHHHHHHHHHHcCCcE
Confidence 01122345667778888764
No 282
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=98.57 E-value=6e-08 Score=93.82 Aligned_cols=117 Identities=17% Similarity=0.156 Sum_probs=85.7
Q ss_pred cceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhh----cccchhhccccccCC-CCCccceeeecccccc
Q 006662 477 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GLIGTYQNWCEAMST-YPRTYDLIHADSIFSL 551 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gli~~~~~~ce~~~~-yp~t~Dl~H~~~~fs~ 551 (636)
..+|||+|||.|.++.+|++.+. .+|+.+|.++.++..+.++ |+-. +.-.+..+.. .+.+||+|.++.++.
T Consensus 61 ~~~vLDiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~~~~~fD~i~~~~~~~- 136 (205)
T 3grz_A 61 PLTVADVGTGSGILAIAAHKLGA--KSVLATDISDESMTAAEENAALNGIYD-IALQKTSLLADVDGKFDLIVANILAE- 136 (205)
T ss_dssp CCEEEEETCTTSHHHHHHHHTTC--SEEEEEESCHHHHHHHHHHHHHTTCCC-CEEEESSTTTTCCSCEEEEEEESCHH-
T ss_pred CCEEEEECCCCCHHHHHHHHCCC--CEEEEEECCHHHHHHHHHHHHHcCCCc-eEEEeccccccCCCCceEEEECCcHH-
Confidence 46899999999999999988764 4667777777788887776 4422 2212222333 359999999976653
Q ss_pred CCCCcCHHHHHHHHhhcccCCcEEEEEe-CHHHHHHHHHHHhcCCCceEEec
Q 006662 552 YKDRCEMEDVLLEMDRILRPEGSVIIRD-DVDILVKIKSITDGMEWEGRIAD 602 (636)
Q Consensus 552 ~~~~c~~~~~l~e~dRiLrPgG~~i~~d-~~~~~~~~~~~~~~~~W~~~~~~ 602 (636)
.+..+|.++-|+|||||++++.+ ..+....+.++++...++.....
T Consensus 137 -----~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~Gf~~~~~~ 183 (205)
T 3grz_A 137 -----ILLDLIPQLDSHLNEDGQVIFSGIDYLQLPKIEQALAENSFQIDLKM 183 (205)
T ss_dssp -----HHHHHGGGSGGGEEEEEEEEEEEEEGGGHHHHHHHHHHTTEEEEEEE
T ss_pred -----HHHHHHHHHHHhcCCCCEEEEEecCcccHHHHHHHHHHcCCceEEee
Confidence 25788999999999999999975 34456778888888777776543
No 283
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=98.57 E-value=3.3e-07 Score=92.05 Aligned_cols=127 Identities=11% Similarity=0.090 Sum_probs=90.2
Q ss_pred HHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhcCC--EEEEcCcCCchHHHHHHHHHc----CC--CeEEEEeccccC
Q 006662 205 IDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNI--LAVSFAPRDTHEAQVQFALER----GV--PALIGVMASIRL 276 (636)
Q Consensus 205 id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~~v--~vv~i~p~Dis~a~l~~A~er----g~--~~~~~~~d~~~L 276 (636)
++.+.++++ ++. +|||||||+|.++..+++.+. .++.+ |+++.+++.|+++ +. .+.+..+|....
T Consensus 12 L~~i~~~v~--~g~--~VlDIGtGsG~l~i~la~~~~~~~V~Av---Di~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~ 84 (230)
T 3lec_A 12 LQKVANYVP--KGA--RLLDVGSDHAYLPIFLLQMGYCDFAIAG---EVVNGPYQSALKNVSEHGLTSKIDVRLANGLSA 84 (230)
T ss_dssp HHHHHTTSC--TTE--EEEEETCSTTHHHHHHHHTTCEEEEEEE---ESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGG
T ss_pred HHHHHHhCC--CCC--EEEEECCchHHHHHHHHHhCCCCEEEEE---ECCHHHHHHHHHHHHHcCCCCcEEEEECchhhc
Confidence 345555542 343 899999999999999999863 34444 8899998888754 43 478888887776
Q ss_pred CCCCCCeeEEEecccccccccChHHHHHHHHhcccCCcEEEEEeCCCCccccccCCCCchhhhHHHHHHHHHHHHHhceE
Q 006662 277 PYPSRAFDMAHCSRCLIPWGQYDGLYLIEVDRVLRPGGYWILSGPPVNWESHWKGWNRTTEDLKSEQNGIETIARSLCWK 356 (636)
Q Consensus 277 pf~~~sFDlV~~s~~L~h~~~d~~~~L~el~RvLKPGG~Liis~p~~~w~~~~~~W~~t~e~l~~~~~~ie~la~~l~Wk 356 (636)
..+++.||+|+.....-. --..++.+..+.|+++|+|+++.. .. ...+.+.....+|.
T Consensus 85 ~~~~~~~D~IviaGmGg~---lI~~IL~~~~~~l~~~~~lIlqp~------------~~-------~~~lr~~L~~~Gf~ 142 (230)
T 3lec_A 85 FEEADNIDTITICGMGGR---LIADILNNDIDKLQHVKTLVLQPN------------NR-------EDDLRKWLAANDFE 142 (230)
T ss_dssp CCGGGCCCEEEEEEECHH---HHHHHHHHTGGGGTTCCEEEEEES------------SC-------HHHHHHHHHHTTEE
T ss_pred cccccccCEEEEeCCchH---HHHHHHHHHHHHhCcCCEEEEECC------------CC-------hHHHHHHHHHCCCE
Confidence 655557999886554311 125788889999999999999953 10 23466677778897
Q ss_pred eecc
Q 006662 357 KLIQ 360 (636)
Q Consensus 357 ~v~~ 360 (636)
.+.+
T Consensus 143 i~~E 146 (230)
T 3lec_A 143 IVAE 146 (230)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7654
No 284
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=98.56 E-value=2.2e-07 Score=91.77 Aligned_cols=121 Identities=14% Similarity=0.068 Sum_probs=88.3
Q ss_pred ceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhhc----ccchhhccccccCCC--CCccceeeecccccc
Q 006662 478 RNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERG----LIGTYQNWCEAMSTY--PRTYDLIHADSIFSL 551 (636)
Q Consensus 478 r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRg----li~~~~~~ce~~~~y--p~t~Dl~H~~~~fs~ 551 (636)
.+|||+|||.|.++.+|++.+. +|+.+|.++.++..+.++. +..-+.-.+..+..+ +.+||+|.+.++|..
T Consensus 68 ~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~l~~ 144 (235)
T 3lcc_A 68 GRALVPGCGGGHDVVAMASPER---FVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRPTELFDLIFDYVFFCA 144 (235)
T ss_dssp EEEEEETCTTCHHHHHHCBTTE---EEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCCCSSCEEEEEEESSTTT
T ss_pred CCEEEeCCCCCHHHHHHHhCCC---eEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCCCCCCeeEEEEChhhhc
Confidence 4999999999999999988754 5677788878888887764 212122222333333 379999999888875
Q ss_pred CCCCcCHHHHHHHHhhcccCCcEEEEEeCH-----------HHHHHHHHHHhcCCCceEEec
Q 006662 552 YKDRCEMEDVLLEMDRILRPEGSVIIRDDV-----------DILVKIKSITDGMEWEGRIAD 602 (636)
Q Consensus 552 ~~~~c~~~~~l~e~dRiLrPgG~~i~~d~~-----------~~~~~~~~~~~~~~W~~~~~~ 602 (636)
.. .-+...+|-++-|+|||||++++.+-. -....++++++...|+....+
T Consensus 145 ~~-~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 205 (235)
T 3lcc_A 145 IE-PEMRPAWAKSMYELLKPDGELITLMYPITDHVGGPPYKVDVSTFEEVLVPIGFKAVSVE 205 (235)
T ss_dssp SC-GGGHHHHHHHHHHHEEEEEEEEEEECCCSCCCSCSSCCCCHHHHHHHHGGGTEEEEEEE
T ss_pred CC-HHHHHHHHHHHHHHCCCCcEEEEEEecccccCCCCCccCCHHHHHHHHHHcCCeEEEEE
Confidence 53 346789999999999999999986321 134678888888888876443
No 285
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=98.56 E-value=3.7e-08 Score=99.29 Aligned_cols=100 Identities=21% Similarity=0.254 Sum_probs=72.4
Q ss_pred CCcceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhh----cccchhhcccccc--CCCC-Cccceeeecc
Q 006662 475 GRYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GLIGTYQNWCEAM--STYP-RTYDLIHADS 547 (636)
Q Consensus 475 ~~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gli~~~~~~ce~~--~~yp-~t~Dl~H~~~ 547 (636)
....+|||+|||.|.++..|++.. ..+|+.+|.++.++..+.++ |+..-+.-.+..+ .++| .+||+|.+.+
T Consensus 60 ~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 137 (273)
T 3bus_A 60 RSGDRVLDVGCGIGKPAVRLATAR--DVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPFEDASFDAVWALE 137 (273)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHS--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCTTCEEEEEEES
T ss_pred CCCCEEEEeCCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCCCCCCccEEEEec
Confidence 346799999999999999997641 13666777777788877765 5422111111222 2344 7999999988
Q ss_pred ccccCCCCcCHHHHHHHHhhcccCCcEEEEEe
Q 006662 548 IFSLYKDRCEMEDVLLEMDRILRPEGSVIIRD 579 (636)
Q Consensus 548 ~fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d 579 (636)
+|.... +.+.+|-|+-|+|||||.+++.+
T Consensus 138 ~l~~~~---~~~~~l~~~~~~L~pgG~l~i~~ 166 (273)
T 3bus_A 138 SLHHMP---DRGRALREMARVLRPGGTVAIAD 166 (273)
T ss_dssp CTTTSS---CHHHHHHHHHTTEEEEEEEEEEE
T ss_pred hhhhCC---CHHHHHHHHHHHcCCCeEEEEEE
Confidence 887554 35899999999999999999985
No 286
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=98.55 E-value=9.2e-08 Score=97.81 Aligned_cols=99 Identities=12% Similarity=0.095 Sum_probs=72.7
Q ss_pred CCcceEeeecccchhhhhhhcCC---CeEEEEecCCCCCccchHHHHhh----cc-cchhh-ccccccCCCCCccceeee
Q 006662 475 GRYRNLLDMNAYLGGFAAALVDD---PLWVMNTVPVEAKINTLGVIYER----GL-IGTYQ-NWCEAMSTYPRTYDLIHA 545 (636)
Q Consensus 475 ~~~r~vlD~~~g~ggfaa~l~~~---~v~~mnv~~~~~~~~~l~~~~eR----gl-i~~~~-~~ce~~~~yp~t~Dl~H~ 545 (636)
....+|||+|||.|.++..|++. +. +|+.+|.++.++..+.++ ++ +-.+. |.. . .+++.+||+|++
T Consensus 21 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~-~-~~~~~~fD~v~~ 95 (284)
T 3gu3_A 21 TKPVHIVDYGCGYGYLGLVLMPLLPEGS---KYTGIDSGETLLAEARELFRLLPYDSEFLEGDAT-E-IELNDKYDIAIC 95 (284)
T ss_dssp CSCCEEEEETCTTTHHHHHHTTTSCTTC---EEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTT-T-CCCSSCEEEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCC---EEEEEECCHHHHHHHHHHHHhcCCceEEEEcchh-h-cCcCCCeeEEEE
Confidence 34679999999999999999876 22 455667766777777665 11 22222 322 2 234789999999
Q ss_pred ccccccCCCCcCHHHHHHHHhhcccCCcEEEEEeCH
Q 006662 546 DSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDDV 581 (636)
Q Consensus 546 ~~~fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~~ 581 (636)
..++.... +.+.+|.++-|+|||||++++.+..
T Consensus 96 ~~~l~~~~---~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 96 HAFLLHMT---TPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp ESCGGGCS---SHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CChhhcCC---CHHHHHHHHHHHcCCCCEEEEEecc
Confidence 88877553 5589999999999999999988654
No 287
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=98.55 E-value=1.2e-07 Score=94.58 Aligned_cols=95 Identities=19% Similarity=0.300 Sum_probs=72.8
Q ss_pred CcceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhhc--c---cchhh-ccccccCCCC-Cccceeeeccc
Q 006662 476 RYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERG--L---IGTYQ-NWCEAMSTYP-RTYDLIHADSI 548 (636)
Q Consensus 476 ~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRg--l---i~~~~-~~ce~~~~yp-~t~Dl~H~~~~ 548 (636)
...+|||+|||.|.++..|++.+. +|+.+|.++.++..+.++- . +-..+ |+ +.++ +| .+||+|++..+
T Consensus 39 ~~~~vLDiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~-~~~~-~~~~~fD~v~~~~~ 113 (263)
T 2yqz_A 39 EEPVFLELGVGTGRIALPLIARGY---RYIALDADAAMLEVFRQKIAGVDRKVQVVQADA-RAIP-LPDESVHGVIVVHL 113 (263)
T ss_dssp SCCEEEEETCTTSTTHHHHHTTTC---EEEEEESCHHHHHHHHHHTTTSCTTEEEEESCT-TSCC-SCTTCEEEEEEESC
T ss_pred CCCEEEEeCCcCCHHHHHHHHCCC---EEEEEECCHHHHHHHHHHhhccCCceEEEEccc-ccCC-CCCCCeeEEEECCc
Confidence 467899999999999999998853 6777788878999888872 1 22222 22 2232 44 79999999877
Q ss_pred cccCCCCcCHHHHHHHHhhcccCCcEEEEE
Q 006662 549 FSLYKDRCEMEDVLLEMDRILRPEGSVIIR 578 (636)
Q Consensus 549 fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~ 578 (636)
|.... +.+.+|.|+-|+|||||++++.
T Consensus 114 l~~~~---~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 114 WHLVP---DWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp GGGCT---THHHHHHHHHHHEEEEEEEEEE
T ss_pred hhhcC---CHHHHHHHHHHHCCCCcEEEEE
Confidence 76554 5689999999999999999986
No 288
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=98.55 E-value=3.9e-07 Score=92.35 Aligned_cols=127 Identities=13% Similarity=0.060 Sum_probs=88.9
Q ss_pred HHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhcCC--EEEEcCcCCchHHHHHHHHHc----CC--CeEEEEeccccC
Q 006662 205 IDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNI--LAVSFAPRDTHEAQVQFALER----GV--PALIGVMASIRL 276 (636)
Q Consensus 205 id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~~v--~vv~i~p~Dis~a~l~~A~er----g~--~~~~~~~d~~~L 276 (636)
++.+.++++ ++. +|||||||+|.++..+++.+. .++.+ |+++.+++.|+++ +. .+.+..+|....
T Consensus 12 L~~i~~~v~--~g~--~VlDIGtGsG~l~i~la~~~~~~~V~av---Di~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~ 84 (244)
T 3gnl_A 12 LEKVASYIT--KNE--RIADIGSDHAYLPCFAVKNQTASFAIAG---EVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAV 84 (244)
T ss_dssp HHHHHTTCC--SSE--EEEEETCSTTHHHHHHHHTTSEEEEEEE---ESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGG
T ss_pred HHHHHHhCC--CCC--EEEEECCccHHHHHHHHHhCCCCEEEEE---ECCHHHHHHHHHHHHHcCCCceEEEEecchhhc
Confidence 345555543 343 899999999999999999863 34455 8899999888755 44 378888887665
Q ss_pred CCCCCCeeEEEecccccccccChHHHHHHHHhcccCCcEEEEEeCCCCccccccCCCCchhhhHHHHHHHHHHHHHhceE
Q 006662 277 PYPSRAFDMAHCSRCLIPWGQYDGLYLIEVDRVLRPGGYWILSGPPVNWESHWKGWNRTTEDLKSEQNGIETIARSLCWK 356 (636)
Q Consensus 277 pf~~~sFDlV~~s~~L~h~~~d~~~~L~el~RvLKPGG~Liis~p~~~w~~~~~~W~~t~e~l~~~~~~ie~la~~l~Wk 356 (636)
..++..||+|+.....-. --..++.+..+.|+++|+|+++.. . ....+.+.....+|.
T Consensus 85 ~~~~~~~D~IviagmGg~---lI~~IL~~~~~~L~~~~~lIlq~~------------~-------~~~~lr~~L~~~Gf~ 142 (244)
T 3gnl_A 85 IEKKDAIDTIVIAGMGGT---LIRTILEEGAAKLAGVTKLILQPN------------I-------AAWQLREWSEQNNWL 142 (244)
T ss_dssp CCGGGCCCEEEEEEECHH---HHHHHHHHTGGGGTTCCEEEEEES------------S-------CHHHHHHHHHHHTEE
T ss_pred cCccccccEEEEeCCchH---HHHHHHHHHHHHhCCCCEEEEEcC------------C-------ChHHHHHHHHHCCCE
Confidence 544446999987554311 125788899999999999999953 0 023455666777887
Q ss_pred eecc
Q 006662 357 KLIQ 360 (636)
Q Consensus 357 ~v~~ 360 (636)
.+.+
T Consensus 143 i~~E 146 (244)
T 3gnl_A 143 ITSE 146 (244)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6543
No 289
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=98.55 E-value=4.6e-08 Score=99.73 Aligned_cols=117 Identities=18% Similarity=0.191 Sum_probs=83.1
Q ss_pred cceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhh----cc-cchhh-ccccccCCCCCccceeeeccccc
Q 006662 477 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GL-IGTYQ-NWCEAMSTYPRTYDLIHADSIFS 550 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl-i~~~~-~~ce~~~~yp~t~Dl~H~~~~fs 550 (636)
..+|||+|||.|.++.+|++.+. +|+.+|.++.++..+.++ |+ +-.++ |.. .+.. +.+||+|.+..+|.
T Consensus 121 ~~~vLD~GcG~G~~~~~l~~~g~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~-~~~~-~~~fD~i~~~~~~~ 195 (286)
T 3m70_A 121 PCKVLDLGCGQGRNSLYLSLLGY---DVTSWDHNENSIAFLNETKEKENLNISTALYDIN-AANI-QENYDFIVSTVVFM 195 (286)
T ss_dssp SCEEEEESCTTCHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGG-GCCC-CSCEEEEEECSSGG
T ss_pred CCcEEEECCCCCHHHHHHHHCCC---eEEEEECCHHHHHHHHHHHHHcCCceEEEEeccc-cccc-cCCccEEEEccchh
Confidence 56899999999999999998865 677778877788777665 43 22221 221 1222 68999999998887
Q ss_pred cCCCCcCHHHHHHHHhhcccCCcEEEEEeCH--------------HHHHHHHHHHhcCCCceEEe
Q 006662 551 LYKDRCEMEDVLLEMDRILRPEGSVIIRDDV--------------DILVKIKSITDGMEWEGRIA 601 (636)
Q Consensus 551 ~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~~--------------~~~~~~~~~~~~~~W~~~~~ 601 (636)
.. +.-.+..+|-++-|+|||||.++|.... -....++++... |++...
T Consensus 196 ~~-~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~ 257 (286)
T 3m70_A 196 FL-NRERVPSIIKNMKEHTNVGGYNLIVAAMSTDDVPCPLPFSFTFAENELKEYYKD--WEFLEY 257 (286)
T ss_dssp GS-CGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCSSCCSCCBCTTHHHHHTTT--SEEEEE
T ss_pred hC-CHHHHHHHHHHHHHhcCCCcEEEEEEecCCCCCCCCCCccccCCHHHHHHHhcC--CEEEEE
Confidence 44 3346779999999999999998774211 013466677666 887654
No 290
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=98.54 E-value=4.6e-08 Score=98.93 Aligned_cols=98 Identities=15% Similarity=0.283 Sum_probs=71.8
Q ss_pred CCcceEeeecccchhhhhhhcCC--CeEEEEecCCCCCccchHHHHhh----cc--cchhh-ccccccCCCCCccceeee
Q 006662 475 GRYRNLLDMNAYLGGFAAALVDD--PLWVMNTVPVEAKINTLGVIYER----GL--IGTYQ-NWCEAMSTYPRTYDLIHA 545 (636)
Q Consensus 475 ~~~r~vlD~~~g~ggfaa~l~~~--~v~~mnv~~~~~~~~~l~~~~eR----gl--i~~~~-~~ce~~~~yp~t~Dl~H~ 545 (636)
....+|||+|||.|.++..|++. +. .|+.+|.++.++..+.++ |+ +-... |. +.++.-+.+||+|++
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~ 111 (276)
T 3mgg_A 36 PPGAKVLEAGCGIGAQTVILAKNNPDA---EITSIDISPESLEKARENTEKNGIKNVKFLQANI-FSLPFEDSSFDHIFV 111 (276)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHHCTTS---EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCG-GGCCSCTTCEEEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCC---EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEccc-ccCCCCCCCeeEEEE
Confidence 34679999999999999999876 33 556667776788877766 44 22222 22 222222489999999
Q ss_pred ccccccCCCCcCHHHHHHHHhhcccCCcEEEEEe
Q 006662 546 DSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRD 579 (636)
Q Consensus 546 ~~~fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d 579 (636)
..++.... +.+.+|-++.|+|||||++++.+
T Consensus 112 ~~~l~~~~---~~~~~l~~~~~~L~pgG~l~~~~ 142 (276)
T 3mgg_A 112 CFVLEHLQ---SPEEALKSLKKVLKPGGTITVIE 142 (276)
T ss_dssp ESCGGGCS---CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred echhhhcC---CHHHHHHHHHHHcCCCcEEEEEE
Confidence 88877554 45799999999999999999975
No 291
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=98.54 E-value=2e-07 Score=101.50 Aligned_cols=110 Identities=12% Similarity=0.083 Sum_probs=78.0
Q ss_pred HHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhcC--CEEEEcCcCCchHHHHHHHHHc----CCCeEEEEeccccCC--
Q 006662 206 DDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRN--ILAVSFAPRDTHEAQVQFALER----GVPALIGVMASIRLP-- 277 (636)
Q Consensus 206 d~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~~--v~vv~i~p~Dis~a~l~~A~er----g~~~~~~~~d~~~Lp-- 277 (636)
..+..++...++. +|||+|||+|..+..+++.. ..++++ |+++.+++.++++ +.++.+...|...++
T Consensus 236 ~~~~~~l~~~~g~--~VLDlgaG~G~~t~~la~~~~~~~v~a~---D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~~~~ 310 (429)
T 1sqg_A 236 QGCMTWLAPQNGE--HILDLCAAPGGKTTHILEVAPEAQVVAV---DIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQW 310 (429)
T ss_dssp HTHHHHHCCCTTC--EEEEESCTTCHHHHHHHHHCTTCEEEEE---ESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHHH
T ss_pred HHHHHHcCCCCcC--eEEEECCCchHHHHHHHHHcCCCEEEEE---CCCHHHHHHHHHHHHHcCCCeEEEeCchhhchhh
Confidence 3455555555555 99999999999999999863 455555 6666666655443 666788888877765
Q ss_pred CCCCCeeEEEec------ccccccccCh----------------HHHHHHHHhcccCCcEEEEEeC
Q 006662 278 YPSRAFDMAHCS------RCLIPWGQYD----------------GLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 278 f~~~sFDlV~~s------~~L~h~~~d~----------------~~~L~el~RvLKPGG~Liis~p 321 (636)
+++++||+|++. .++ +..++. ..++.++.++|||||++++++.
T Consensus 311 ~~~~~fD~Vl~D~Pcsg~g~~-~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystc 375 (429)
T 1sqg_A 311 CGEQQFDRILLDAPCSATGVI-RRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATC 375 (429)
T ss_dssp HTTCCEEEEEEECCCCCGGGT-TTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEES
T ss_pred cccCCCCEEEEeCCCCccccc-CCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 566789999962 122 111121 3789999999999999999975
No 292
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=98.54 E-value=8.2e-08 Score=98.69 Aligned_cols=96 Identities=13% Similarity=0.124 Sum_probs=70.8
Q ss_pred CCcceEeeecccchhhhhhhcC---CCeEEEEecCCCCCccchHHHHhh-----cccchhhccccccCC--C-C------
Q 006662 475 GRYRNLLDMNAYLGGFAAALVD---DPLWVMNTVPVEAKINTLGVIYER-----GLIGTYQNWCEAMST--Y-P------ 537 (636)
Q Consensus 475 ~~~r~vlD~~~g~ggfaa~l~~---~~v~~mnv~~~~~~~~~l~~~~eR-----gli~~~~~~ce~~~~--y-p------ 537 (636)
....+|||+|||.|.++..|++ .. .+|+.+|.++.++..+.++ |...-++-.+..+.. + .
T Consensus 35 ~~~~~vLDiGcG~G~~~~~la~~~~~~---~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~ 111 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTATLQMAQELKPF---EQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDK 111 (299)
T ss_dssp SCCSEEEEETCTTTHHHHHHHHHSSCC---SEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTS
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCC---CEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccC
Confidence 3478999999999999999994 43 3667778887888888876 332222111122222 2 2
Q ss_pred CccceeeeccccccCCCCcCHHHHHHHHhhcccCCcEEEE
Q 006662 538 RTYDLIHADSIFSLYKDRCEMEDVLLEMDRILRPEGSVII 577 (636)
Q Consensus 538 ~t~Dl~H~~~~fs~~~~~c~~~~~l~e~dRiLrPgG~~i~ 577 (636)
.+||+|++..++... +...+|.++.|+|||||.+++
T Consensus 112 ~~fD~V~~~~~l~~~----~~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 112 QKIDMITAVECAHWF----DFEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp SCEEEEEEESCGGGS----CHHHHHHHHHHHEEEEEEEEE
T ss_pred CCeeEEeHhhHHHHh----CHHHHHHHHHHhcCCCcEEEE
Confidence 699999998877654 789999999999999999998
No 293
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.54 E-value=1.7e-07 Score=97.47 Aligned_cols=87 Identities=16% Similarity=0.259 Sum_probs=63.7
Q ss_pred HHHHHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhcCCEEEEcCcCCchHHHHHHHHHc----C-CCeEEEEeccccC
Q 006662 202 DAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALER----G-VPALIGVMASIRL 276 (636)
Q Consensus 202 ~~~id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~~v~vv~i~p~Dis~a~l~~A~er----g-~~~~~~~~d~~~L 276 (636)
...++.+.+.+...++. +|||||||+|.++..|++++..++++ |+++.+++.++++ + .++.+..+|...+
T Consensus 28 ~~i~~~i~~~~~~~~~~--~VLDiG~G~G~lt~~La~~~~~v~~v---Di~~~~~~~a~~~~~~~~~~~v~~~~~D~~~~ 102 (299)
T 2h1r_A 28 PGILDKIIYAAKIKSSD--IVLEIGCGTGNLTVKLLPLAKKVITI---DIDSRMISEVKKRCLYEGYNNLEVYEGDAIKT 102 (299)
T ss_dssp HHHHHHHHHHHCCCTTC--EEEEECCTTSTTHHHHTTTSSEEEEE---CSCHHHHHHHHHHHHHTTCCCEEC----CCSS
T ss_pred HHHHHHHHHhcCCCCcC--EEEEEcCcCcHHHHHHHhcCCEEEEE---ECCHHHHHHHHHHHHHcCCCceEEEECchhhC
Confidence 34566677777655554 99999999999999999987777777 8899999888754 3 3578888888777
Q ss_pred CCCCCCeeEEEecccccccc
Q 006662 277 PYPSRAFDMAHCSRCLIPWG 296 (636)
Q Consensus 277 pf~~~sFDlV~~s~~L~h~~ 296 (636)
+++ +||+|+++... ++.
T Consensus 103 ~~~--~~D~Vv~n~py-~~~ 119 (299)
T 2h1r_A 103 VFP--KFDVCTANIPY-KIS 119 (299)
T ss_dssp CCC--CCSEEEEECCG-GGH
T ss_pred Ccc--cCCEEEEcCCc-ccc
Confidence 654 79999997655 444
No 294
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=98.54 E-value=1.6e-07 Score=92.29 Aligned_cols=138 Identities=14% Similarity=0.043 Sum_probs=95.4
Q ss_pred cceEeeeccc-chhhhhhhcCCCeEEEEecCCCCCccchHHHHhh----cc-cchhh-ccccccCCCC-Cccceeeeccc
Q 006662 477 YRNLLDMNAY-LGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GL-IGTYQ-NWCEAMSTYP-RTYDLIHADSI 548 (636)
Q Consensus 477 ~r~vlD~~~g-~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl-i~~~~-~~ce~~~~yp-~t~Dl~H~~~~ 548 (636)
..+|||+||| .|.++..|++.. ..+|+.+|.++.++..+.++ |+ +.+++ |+ +.+..+| .+||+|-++-.
T Consensus 56 ~~~vLDlG~G~~G~~~~~la~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~-~~~~~~~~~~fD~I~~npp 132 (230)
T 3evz_A 56 GEVALEIGTGHTAMMALMAEKFF--NCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNG-GIIKGVVEGTFDVIFSAPP 132 (230)
T ss_dssp SCEEEEECCTTTCHHHHHHHHHH--CCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSS-CSSTTTCCSCEEEEEECCC
T ss_pred CCEEEEcCCCHHHHHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCc-hhhhhcccCceeEEEECCC
Confidence 5789999999 999999988762 23567777777788777654 43 22332 21 2355565 89999998755
Q ss_pred cccCC----------------CCcCHHHHHHHHhhcccCCcEEEEE--eCHHHHHHHHHHHhcCCCceEEeccCCCCCCc
Q 006662 549 FSLYK----------------DRCEMEDVLLEMDRILRPEGSVIIR--DDVDILVKIKSITDGMEWEGRIADHENGPRQR 610 (636)
Q Consensus 549 fs~~~----------------~~c~~~~~l~e~dRiLrPgG~~i~~--d~~~~~~~~~~~~~~~~W~~~~~~~e~~~~~~ 610 (636)
|.... ....+..+|-++-|+|||||.+++. ...+....+.+.++...|++.......|. .-
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~g~-~~ 211 (230)
T 3evz_A 133 YYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKEKLLNVIKERGIKLGYSVKDIKFKVGT-RW 211 (230)
T ss_dssp CC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCHHHHHHHHHHHHHTTCEEEEEEECCCC--C
T ss_pred CcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccHhHHHHHHHHHHHcCCceEEEEecCCC-eE
Confidence 53211 1122478999999999999999984 34467788888899999988876555443 34
Q ss_pred ceEEEEEe
Q 006662 611 EKILFANK 618 (636)
Q Consensus 611 ~~~l~~~K 618 (636)
-.+|+.+|
T Consensus 212 ~~~l~f~~ 219 (230)
T 3evz_A 212 RHSLIFFK 219 (230)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEec
Confidence 55666665
No 295
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.53 E-value=1e-07 Score=94.91 Aligned_cols=114 Identities=18% Similarity=0.254 Sum_probs=76.8
Q ss_pred HHHHHHHHhhhccCCCCCcceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhh----cc-cchhh-ccccc
Q 006662 459 KRVTYYKSVDYQLAQPGRYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GL-IGTYQ-NWCEA 532 (636)
Q Consensus 459 ~~v~~y~~~~~~l~~~~~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl-i~~~~-~~ce~ 532 (636)
..+.....++..+.. ....+|||+|||.|.++..|++.+. +|+.+|.++.++..+.++ |+ +-.++ |..+
T Consensus 25 ~~~~~~~~~~~~~~~-~~~~~vLDlGcG~G~~~~~l~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~- 99 (252)
T 1wzn_A 25 AEIDFVEEIFKEDAK-REVRRVLDLACGTGIPTLELAERGY---EVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLE- 99 (252)
T ss_dssp HHHHHHHHHHHHTCS-SCCCEEEEETCTTCHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGG-
T ss_pred HHHHHHHHHHHHhcc-cCCCEEEEeCCCCCHHHHHHHHCCC---eEEEEECCHHHHHHHHHHHHhcCCceEEEECChhh-
Confidence 334444444444433 3457999999999999999998865 677888887888888765 32 22222 2222
Q ss_pred cCCCCCccceeeecc-ccccCCCCcCHHHHHHHHhhcccCCcEEEEEe
Q 006662 533 MSTYPRTYDLIHADS-IFSLYKDRCEMEDVLLEMDRILRPEGSVIIRD 579 (636)
Q Consensus 533 ~~~yp~t~Dl~H~~~-~fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d 579 (636)
+ .++.+||+|.+.. .+. +.+.-+...+|.++-|+|+|||.+|+.-
T Consensus 100 ~-~~~~~fD~v~~~~~~~~-~~~~~~~~~~l~~~~~~L~pgG~li~~~ 145 (252)
T 1wzn_A 100 I-AFKNEFDAVTMFFSTIM-YFDEEDLRKLFSKVAEALKPGGVFITDF 145 (252)
T ss_dssp C-CCCSCEEEEEECSSGGG-GSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred c-ccCCCccEEEEcCCchh-cCCHHHHHHHHHHHHHHcCCCeEEEEec
Confidence 1 2458899998742 222 2233356789999999999999999864
No 296
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=98.52 E-value=1.2e-07 Score=92.53 Aligned_cols=100 Identities=14% Similarity=0.233 Sum_probs=73.5
Q ss_pred cceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhhcc-cch-------hhccccccCC--C-CCccceeee
Q 006662 477 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERGL-IGT-------YQNWCEAMST--Y-PRTYDLIHA 545 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRgl-i~~-------~~~~ce~~~~--y-p~t~Dl~H~ 545 (636)
..+|||+|||.|.++.+|++.+. +|+.+|.++.++..+.++.- .+. ..-.+..+.. + +.+||+|.+
T Consensus 31 ~~~vLdiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~ 107 (235)
T 3sm3_A 31 DDEILDIGCGSGKISLELASKGY---SVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAVM 107 (235)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEEE
T ss_pred CCeEEEECCCCCHHHHHHHhCCC---eEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEEE
Confidence 56899999999999999998854 67777877788888877432 111 1111222222 3 389999999
Q ss_pred ccccccCCCCcCHHHHHHHHhhcccCCcEEEEEe
Q 006662 546 DSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRD 579 (636)
Q Consensus 546 ~~~fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d 579 (636)
.+++....+.-....+|-++-|+|||||.+++.+
T Consensus 108 ~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 141 (235)
T 3sm3_A 108 QAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVE 141 (235)
T ss_dssp ESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEE
Confidence 8888766554444589999999999999999975
No 297
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=98.52 E-value=7.9e-08 Score=97.00 Aligned_cols=97 Identities=21% Similarity=0.352 Sum_probs=72.5
Q ss_pred CCcceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhhcccchhhccccccCCCC-CccceeeeccccccCC
Q 006662 475 GRYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERGLIGTYQNWCEAMSTYP-RTYDLIHADSIFSLYK 553 (636)
Q Consensus 475 ~~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRgli~~~~~~ce~~~~yp-~t~Dl~H~~~~fs~~~ 553 (636)
....+|||+|||.|.++..|++.+. +|+.+|.++.++..+.++.-+..++.=.+.++ +| .+||+||+.+++...
T Consensus 33 ~~~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~d~~~~~-~~~~~fD~v~~~~~l~~~- 107 (261)
T 3ege_A 33 PKGSVIADIGAGTGGYSVALANQGL---FVYAVEPSIVMRQQAVVHPQVEWFTGYAENLA-LPDKSVDGVISILAIHHF- 107 (261)
T ss_dssp CTTCEEEEETCTTSHHHHHHHTTTC---EEEEECSCHHHHHSSCCCTTEEEECCCTTSCC-SCTTCBSEEEEESCGGGC-
T ss_pred CCCCEEEEEcCcccHHHHHHHhCCC---EEEEEeCCHHHHHHHHhccCCEEEECchhhCC-CCCCCEeEEEEcchHhhc-
Confidence 3467999999999999999998654 66777777677776666643333332223333 54 899999998887655
Q ss_pred CCcCHHHHHHHHhhcccCCcEEEEEe
Q 006662 554 DRCEMEDVLLEMDRILRPEGSVIIRD 579 (636)
Q Consensus 554 ~~c~~~~~l~e~dRiLrPgG~~i~~d 579 (636)
-+.+.+|-|+-|+|| ||++++.+
T Consensus 108 --~~~~~~l~~~~~~Lk-gG~~~~~~ 130 (261)
T 3ege_A 108 --SHLEKSFQEMQRIIR-DGTIVLLT 130 (261)
T ss_dssp --SSHHHHHHHHHHHBC-SSCEEEEE
T ss_pred --cCHHHHHHHHHHHhC-CcEEEEEE
Confidence 456899999999999 99888864
No 298
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=98.52 E-value=1e-07 Score=93.81 Aligned_cols=101 Identities=18% Similarity=0.175 Sum_probs=72.3
Q ss_pred CCcceEeeecccchhhhhhhcCC--CeEEEEecCCCCCccchHHHHhhcc-cchhhccccccCCC--CCccceeeecccc
Q 006662 475 GRYRNLLDMNAYLGGFAAALVDD--PLWVMNTVPVEAKINTLGVIYERGL-IGTYQNWCEAMSTY--PRTYDLIHADSIF 549 (636)
Q Consensus 475 ~~~r~vlD~~~g~ggfaa~l~~~--~v~~mnv~~~~~~~~~l~~~~eRgl-i~~~~~~ce~~~~y--p~t~Dl~H~~~~f 549 (636)
....+|||+|||.|.++.+|++. +. +|+.+|.++.++..+.++-- .+-+.-.+..+..+ +.+||+|.+..++
T Consensus 43 ~~~~~vLDiG~G~G~~~~~l~~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~l 119 (234)
T 3dtn_A 43 TENPDILDLGAGTGLLSAFLMEKYPEA---TFTLVDMSEKMLEIAKNRFRGNLKVKYIEADYSKYDFEEKYDMVVSALSI 119 (234)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHCTTC---EEEEEESCHHHHHHHHHHTCSCTTEEEEESCTTTCCCCSCEEEEEEESCG
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCC---eEEEEECCHHHHHHHHHhhccCCCEEEEeCchhccCCCCCceEEEEeCcc
Confidence 44689999999999999999876 32 56667777788888887721 11111222333333 3899999998877
Q ss_pred ccCCCCcCHHHHHHHHhhcccCCcEEEEEe
Q 006662 550 SLYKDRCEMEDVLLEMDRILRPEGSVIIRD 579 (636)
Q Consensus 550 s~~~~~c~~~~~l~e~dRiLrPgG~~i~~d 579 (636)
.... .-....+|-|+-|+|||||.+++.+
T Consensus 120 ~~~~-~~~~~~~l~~~~~~LkpgG~l~~~~ 148 (234)
T 3dtn_A 120 HHLE-DEDKKELYKRSYSILKESGIFINAD 148 (234)
T ss_dssp GGSC-HHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccCC-HHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 7552 2123469999999999999999986
No 299
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=98.52 E-value=6.1e-07 Score=96.63 Aligned_cols=100 Identities=12% Similarity=0.030 Sum_probs=75.3
Q ss_pred cEEEEeCCCCcHHHHHHhhcC-CEEEEcCcCCchHHHHHHHHHc----CC---CeEEEEeccccCCC----CCCCeeEEE
Q 006662 220 RTAIDTGCGVASWGAYLMSRN-ILAVSFAPRDTHEAQVQFALER----GV---PALIGVMASIRLPY----PSRAFDMAH 287 (636)
Q Consensus 220 r~VLDIGCGtG~~a~~La~~~-v~vv~i~p~Dis~a~l~~A~er----g~---~~~~~~~d~~~Lpf----~~~sFDlV~ 287 (636)
.+|||+|||+|.++..+++.+ ..++++ |+++.+++.|+++ +. ++.+..+|...... ..++||+|+
T Consensus 222 ~~VLDl~cG~G~~sl~la~~g~~~V~~v---D~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii 298 (396)
T 3c0k_A 222 KRVLNCFSYTGGFAVSALMGGCSQVVSV---DTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIV 298 (396)
T ss_dssp CEEEEESCTTCSHHHHHHHTTCSEEEEE---ESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred CeEEEeeccCCHHHHHHHHCCCCEEEEE---ECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEEE
Confidence 389999999999999999985 366666 8899998887654 45 57888888755421 146899999
Q ss_pred ecccc--------cccccChHHHHHHHHhcccCCcEEEEEeCC
Q 006662 288 CSRCL--------IPWGQYDGLYLIEVDRVLRPGGYWILSGPP 322 (636)
Q Consensus 288 ~s~~L--------~h~~~d~~~~L~el~RvLKPGG~Liis~p~ 322 (636)
+.... .........++.++.++|+|||+++++..+
T Consensus 299 ~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 341 (396)
T 3c0k_A 299 MDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCS 341 (396)
T ss_dssp ECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred ECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 86422 111123368899999999999999998753
No 300
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=98.52 E-value=7.4e-08 Score=94.98 Aligned_cols=98 Identities=12% Similarity=0.210 Sum_probs=73.9
Q ss_pred CCcceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhhcc---cchhh-ccccccCCCC-Cccceeeecccc
Q 006662 475 GRYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERGL---IGTYQ-NWCEAMSTYP-RTYDLIHADSIF 549 (636)
Q Consensus 475 ~~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRgl---i~~~~-~~ce~~~~yp-~t~Dl~H~~~~f 549 (636)
....+|||+|||.|.++.+|++.+. -+|+.+|.++.++..+.++.- +...+ |. +.++ +| .+||+|.+..++
T Consensus 42 ~~~~~vLdiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~-~~~~-~~~~~fD~v~~~~~l 117 (243)
T 3bkw_A 42 VGGLRIVDLGCGFGWFCRWAHEHGA--SYVLGLDLSEKMLARARAAGPDTGITYERADL-DKLH-LPQDSFDLAYSSLAL 117 (243)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTC--SEEEEEESCHHHHHHHHHTSCSSSEEEEECCG-GGCC-CCTTCEEEEEEESCG
T ss_pred cCCCEEEEEcCcCCHHHHHHHHCCC--CeEEEEcCCHHHHHHHHHhcccCCceEEEcCh-hhcc-CCCCCceEEEEeccc
Confidence 3467999999999999999988754 156666777788888888753 22222 22 2222 44 899999998877
Q ss_pred ccCCCCcCHHHHHHHHhhcccCCcEEEEEe
Q 006662 550 SLYKDRCEMEDVLLEMDRILRPEGSVIIRD 579 (636)
Q Consensus 550 s~~~~~c~~~~~l~e~dRiLrPgG~~i~~d 579 (636)
.... +...+|-++-|+|||||.+++.+
T Consensus 118 ~~~~---~~~~~l~~~~~~L~pgG~l~~~~ 144 (243)
T 3bkw_A 118 HYVE---DVARLFRTVHQALSPGGHFVFST 144 (243)
T ss_dssp GGCS---CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cccc---hHHHHHHHHHHhcCcCcEEEEEe
Confidence 6543 56899999999999999999975
No 301
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=98.52 E-value=4.4e-08 Score=95.54 Aligned_cols=121 Identities=10% Similarity=0.065 Sum_probs=83.6
Q ss_pred cceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhhc-c--------------cchhhccccccCCCC----
Q 006662 477 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERG-L--------------IGTYQNWCEAMSTYP---- 537 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRg-l--------------i~~~~~~ce~~~~yp---- 537 (636)
..+|||+|||.|.++.+|++++. .|+.+|.++.++..+.+|- + ..-+.-.|..+...|
T Consensus 23 ~~~vLD~GCG~G~~~~~la~~g~---~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~~ 99 (203)
T 1pjz_A 23 GARVLVPLCGKSQDMSWLSGQGY---HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARDI 99 (203)
T ss_dssp TCEEEETTTCCSHHHHHHHHHCC---EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHHH
T ss_pred CCEEEEeCCCCcHhHHHHHHCCC---eEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcccC
Confidence 56899999999999999998764 6888899989999998872 1 111222233444444
Q ss_pred CccceeeeccccccCCCCcCHHHHHHHHhhcccCCcE-EEEE-eCH----------HHHHHHHHHHhcCCCceEEec
Q 006662 538 RTYDLIHADSIFSLYKDRCEMEDVLLEMDRILRPEGS-VIIR-DDV----------DILVKIKSITDGMEWEGRIAD 602 (636)
Q Consensus 538 ~t~Dl~H~~~~fs~~~~~c~~~~~l~e~dRiLrPgG~-~i~~-d~~----------~~~~~~~~~~~~~~W~~~~~~ 602 (636)
.+||+|-+.++|.... ..+.+.++-||-|+|||||. +++. +-. -..+.+++++.. .|++....
T Consensus 100 ~~fD~v~~~~~l~~l~-~~~~~~~l~~~~r~LkpgG~~~l~~~~~~~~~~~~~~~~~~~~el~~~~~~-gf~i~~~~ 174 (203)
T 1pjz_A 100 GHCAAFYDRAAMIALP-ADMRERYVQHLEALMPQACSGLLITLEYDQALLEGPPFSVPQTWLHRVMSG-NWEVTKVG 174 (203)
T ss_dssp HSEEEEEEESCGGGSC-HHHHHHHHHHHHHHSCSEEEEEEEEESSCSSSSSSCCCCCCHHHHHHTSCS-SEEEEEEE
T ss_pred CCEEEEEECcchhhCC-HHHHHHHHHHHHHHcCCCcEEEEEEEecCccccCCCCCCCCHHHHHHHhcC-CcEEEEec
Confidence 6899999877775443 23456789999999999998 3333 110 024567777776 67765443
No 302
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.52 E-value=4.5e-08 Score=97.16 Aligned_cols=102 Identities=15% Similarity=0.196 Sum_probs=72.7
Q ss_pred CcceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhhcc-----cchhh-ccccccCCCC-Cccceeeeccc
Q 006662 476 RYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERGL-----IGTYQ-NWCEAMSTYP-RTYDLIHADSI 548 (636)
Q Consensus 476 ~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRgl-----i~~~~-~~ce~~~~yp-~t~Dl~H~~~~ 548 (636)
...+|||+|||+|.++.+|++.+. -+|+.+|.++.++..+.++.- +-+++ |+.+-..++| .+||+|.++ .
T Consensus 60 ~~~~vLDiGcGtG~~~~~l~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~d-~ 136 (236)
T 1zx0_A 60 KGGRVLEVGFGMAIAASKVQEAPI--DEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYD-T 136 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHHTSCE--EEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEEC-C
T ss_pred CCCeEEEEeccCCHHHHHHHhcCC--CeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhcccCCCceEEEEEC-C
Confidence 357899999999999999988654 377788888899999888652 22222 3333233565 899999883 2
Q ss_pred ccc---CCCCcCHHHHHHHHhhcccCCcEEEEEeC
Q 006662 549 FSL---YKDRCEMEDVLLEMDRILRPEGSVIIRDD 580 (636)
Q Consensus 549 fs~---~~~~c~~~~~l~e~dRiLrPgG~~i~~d~ 580 (636)
|+. ..+.-..+.+|-|+-|+|||||.+++.+-
T Consensus 137 ~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 171 (236)
T 1zx0_A 137 YPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNL 171 (236)
T ss_dssp CCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCH
T ss_pred cccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEec
Confidence 221 11223345789999999999999998753
No 303
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=98.51 E-value=1.9e-07 Score=90.45 Aligned_cols=96 Identities=27% Similarity=0.408 Sum_probs=70.2
Q ss_pred CcceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhhc-ccchhhccccccCCCC-CccceeeeccccccCC
Q 006662 476 RYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERG-LIGTYQNWCEAMSTYP-RTYDLIHADSIFSLYK 553 (636)
Q Consensus 476 ~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRg-li~~~~~~ce~~~~yp-~t~Dl~H~~~~fs~~~ 553 (636)
...+|||+|||.|.++..| . . -+|+.+|.++.++..+.++. -+..++.-.+.+ ++| .+||+|.+.+++....
T Consensus 36 ~~~~vLdiG~G~G~~~~~l-~--~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~-~~~~~~fD~v~~~~~l~~~~ 109 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL-P--Y--PQKVGVEPSEAMLAVGRRRAPEATWVRAWGEAL-PFPGESFDVVLLFTTLEFVE 109 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC-C--C--SEEEEECCCHHHHHHHHHHCTTSEEECCCTTSC-CSCSSCEEEEEEESCTTTCS
T ss_pred CCCeEEEECCCCCHhHHhC-C--C--CeEEEEeCCHHHHHHHHHhCCCcEEEEcccccC-CCCCCcEEEEEEcChhhhcC
Confidence 3568999999999999998 2 2 15566677778888888873 122222111222 244 7999999988876544
Q ss_pred CCcCHHHHHHHHhhcccCCcEEEEEeC
Q 006662 554 DRCEMEDVLLEMDRILRPEGSVIIRDD 580 (636)
Q Consensus 554 ~~c~~~~~l~e~dRiLrPgG~~i~~d~ 580 (636)
+...+|.|+.|+|||||.+++.+.
T Consensus 110 ---~~~~~l~~~~~~L~pgG~l~i~~~ 133 (211)
T 2gs9_A 110 ---DVERVLLEARRVLRPGGALVVGVL 133 (211)
T ss_dssp ---CHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ---CHHHHHHHHHHHcCCCCEEEEEec
Confidence 578999999999999999999853
No 304
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=98.51 E-value=1.1e-07 Score=89.65 Aligned_cols=116 Identities=14% Similarity=0.222 Sum_probs=83.4
Q ss_pred CcceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhh----cc---cchhh-ccccccCCCCCccceeeecc
Q 006662 476 RYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GL---IGTYQ-NWCEAMSTYPRTYDLIHADS 547 (636)
Q Consensus 476 ~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl---i~~~~-~~ce~~~~yp~t~Dl~H~~~ 547 (636)
...+|||+|||.|.++..|++.. .+|+.+|.++..+..+.++ |+ +-+++ |+.+.+.. ...||+|-+++
T Consensus 33 ~~~~vldiG~G~G~~~~~l~~~~---~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~~D~v~~~~ 108 (192)
T 1l3i_A 33 KNDVAVDVGCGTGGVTLELAGRV---RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCK-IPDIDIAVVGG 108 (192)
T ss_dssp TTCEEEEESCTTSHHHHHHHTTS---SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTT-SCCEEEEEESC
T ss_pred CCCEEEEECCCCCHHHHHHHHhc---CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhccc-CCCCCEEEECC
Confidence 35799999999999999998876 4667777776777777663 33 22222 22221211 14899999876
Q ss_pred ccccCCCCcCHHHHHHHHhhcccCCcEEEEEeC-HHHHHHHHHHHhcCCCceEEe
Q 006662 548 IFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDD-VDILVKIKSITDGMEWEGRIA 601 (636)
Q Consensus 548 ~fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~-~~~~~~~~~~~~~~~W~~~~~ 601 (636)
.+. .+..+|-++.|+|+|||.+++.+. .+....+.++++...|++...
T Consensus 109 ~~~------~~~~~l~~~~~~l~~gG~l~~~~~~~~~~~~~~~~l~~~g~~~~~~ 157 (192)
T 1l3i_A 109 SGG------ELQEILRIIKDKLKPGGRIIVTAILLETKFEAMECLRDLGFDVNIT 157 (192)
T ss_dssp CTT------CHHHHHHHHHHTEEEEEEEEEEECBHHHHHHHHHHHHHTTCCCEEE
T ss_pred chH------HHHHHHHHHHHhcCCCcEEEEEecCcchHHHHHHHHHHCCCceEEE
Confidence 652 468999999999999999999764 567778888888777766543
No 305
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=98.51 E-value=1.7e-07 Score=90.48 Aligned_cols=129 Identities=9% Similarity=0.082 Sum_probs=84.9
Q ss_pred cceEeeecccchhhhhhhcCC-CeEEEEecCCCCCccchHHHHhh----cc--cchhhccccccCCC--CCccceeeecc
Q 006662 477 YRNLLDMNAYLGGFAAALVDD-PLWVMNTVPVEAKINTLGVIYER----GL--IGTYQNWCEAMSTY--PRTYDLIHADS 547 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~~-~v~~mnv~~~~~~~~~l~~~~eR----gl--i~~~~~~ce~~~~y--p~t~Dl~H~~~ 547 (636)
..+|||+|||.|.++.+|+.. +- .+|+.+|.++.++..+.++ |+ +-+++ ..+..+ +.+||+|.+++
T Consensus 66 ~~~vLDiG~G~G~~~~~l~~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~---~d~~~~~~~~~~D~i~~~~ 140 (207)
T 1jsx_A 66 GERFIDVGTGPGLPGIPLSIVRPE--AHFTLLDSLGKRVRFLRQVQHELKLENIEPVQ---SRVEEFPSEPPFDGVISRA 140 (207)
T ss_dssp SSEEEEETCTTTTTHHHHHHHCTT--SEEEEEESCHHHHHHHHHHHHHTTCSSEEEEE---CCTTTSCCCSCEEEEECSC
T ss_pred CCeEEEECCCCCHHHHHHHHHCCC--CEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEe---cchhhCCccCCcCEEEEec
Confidence 358999999999999998764 22 2556667666777777654 44 23332 222233 27899998854
Q ss_pred ccccCCCCcCHHHHHHHHhhcccCCcEEEEEeCHHHHHHHHHHHhcCCCceEEec--cCCCCCCcceEEEEEec
Q 006662 548 IFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDDVDILVKIKSITDGMEWEGRIAD--HENGPRQREKILFANKK 619 (636)
Q Consensus 548 ~fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~~~~~~~~~~~~~~~~W~~~~~~--~e~~~~~~~~~l~~~K~ 619 (636)
+ ...+.++-++-|+|+|||++++......-+.++++.+ .|+..... .-....+...+++++|.
T Consensus 141 ~-------~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~k~ 205 (207)
T 1jsx_A 141 F-------ASLNDMVSWCHHLPGEQGRFYALKGQMPEDEIALLPE--EYQVESVVKLQVPALDGERHLVVIKAN 205 (207)
T ss_dssp S-------SSHHHHHHHHTTSEEEEEEEEEEESSCCHHHHHTSCT--TEEEEEEEEEECC--CCEEEEEEEEEC
T ss_pred c-------CCHHHHHHHHHHhcCCCcEEEEEeCCCchHHHHHHhc--CCceeeeeeeccCCCCCceEEEEEEec
Confidence 3 4568999999999999999999866555556666655 67654311 11122245677777764
No 306
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=98.51 E-value=2.2e-07 Score=90.68 Aligned_cols=104 Identities=15% Similarity=0.215 Sum_probs=72.4
Q ss_pred cceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhh----cccc----hhhccccccC--CCC-Cccceeee
Q 006662 477 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GLIG----TYQNWCEAMS--TYP-RTYDLIHA 545 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gli~----~~~~~ce~~~--~yp-~t~Dl~H~ 545 (636)
..+|||+|||.|.++.+|++..- ..+|+.+|.++.++..+.++ |+-. -+.-.+..+. ..+ .+||+|.+
T Consensus 30 ~~~vLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~ 108 (217)
T 3jwh_A 30 ARRVIDLGCGQGNLLKILLKDSF-FEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQDKRFHGYDAATV 108 (217)
T ss_dssp CCEEEEETCTTCHHHHHHHHCTT-CSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCGGGCSCSEEEE
T ss_pred CCEEEEeCCCCCHHHHHHHhhCC-CCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccccccCCCcCEEee
Confidence 56999999999999999987521 02566677777888888776 2210 1111122222 222 79999999
Q ss_pred ccccccCCCCcCHHHHHHHHhhcccCCcEEEEEeCHH
Q 006662 546 DSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDDVD 582 (636)
Q Consensus 546 ~~~fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~~~ 582 (636)
..+|... ..-++..+|-++-|+|||||.+++.+..+
T Consensus 109 ~~~l~~~-~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 144 (217)
T 3jwh_A 109 IEVIEHL-DLSRLGAFERVLFEFAQPKIVIVTTPNIE 144 (217)
T ss_dssp ESCGGGC-CHHHHHHHHHHHHTTTCCSEEEEEEEBHH
T ss_pred HHHHHcC-CHHHHHHHHHHHHHHcCCCEEEEEccCcc
Confidence 8888755 22345789999999999999998886543
No 307
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=98.51 E-value=6e-08 Score=99.63 Aligned_cols=101 Identities=15% Similarity=0.202 Sum_probs=69.6
Q ss_pred CCcceEeeecccchhhhhh----hcC--CCeEEEEecCCCCCccchHHHHhh-----cccchhhccc----cccC-----
Q 006662 475 GRYRNLLDMNAYLGGFAAA----LVD--DPLWVMNTVPVEAKINTLGVIYER-----GLIGTYQNWC----EAMS----- 534 (636)
Q Consensus 475 ~~~r~vlD~~~g~ggfaa~----l~~--~~v~~mnv~~~~~~~~~l~~~~eR-----gli~~~~~~c----e~~~----- 534 (636)
....+|||+|||.|.++.. |.. ..+ ...++.+|.+..++..+.++ |+-.+--.|. +.+.
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~-~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 129 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGV-CINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLE 129 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTC-EEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHT
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCc-eeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhcc
Confidence 3466899999999986643 322 233 23457778888899988876 3311111121 2232
Q ss_pred CCC-CccceeeeccccccCCCCcCHHHHHHHHhhcccCCcEEEEEe
Q 006662 535 TYP-RTYDLIHADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRD 579 (636)
Q Consensus 535 ~yp-~t~Dl~H~~~~fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d 579 (636)
.++ .+||+|+|..++-... +.+..|.||-|+|||||++++..
T Consensus 130 ~~~~~~fD~V~~~~~l~~~~---d~~~~l~~~~r~LkpgG~l~i~~ 172 (292)
T 2aot_A 130 KKELQKWDFIHMIQMLYYVK---DIPATLKFFHSLLGTNAKMLIIV 172 (292)
T ss_dssp TTCCCCEEEEEEESCGGGCS---CHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ccCCCceeEEEEeeeeeecC---CHHHHHHHHHHHcCCCcEEEEEE
Confidence 243 8999999977776554 56899999999999999999963
No 308
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=98.50 E-value=2.7e-07 Score=90.87 Aligned_cols=95 Identities=15% Similarity=0.284 Sum_probs=71.8
Q ss_pred ceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhhcc-----cchhh-ccccccCCCCCccceeeecc-ccc
Q 006662 478 RNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERGL-----IGTYQ-NWCEAMSTYPRTYDLIHADS-IFS 550 (636)
Q Consensus 478 r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRgl-----i~~~~-~~ce~~~~yp~t~Dl~H~~~-~fs 550 (636)
.+|||+|||.|.++..|++. .+|+.+|.++.++..+.++.- +...+ |..+ + ++|.+||+|.+.. ++.
T Consensus 35 ~~vLdiG~G~G~~~~~l~~~----~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~-~-~~~~~fD~v~~~~~~~~ 108 (243)
T 3d2l_A 35 KRIADIGCGTGTATLLLADH----YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRE-L-ELPEPVDAITILCDSLN 108 (243)
T ss_dssp CEEEEESCTTCHHHHHHTTT----SEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGG-C-CCSSCEEEEEECTTGGG
T ss_pred CeEEEecCCCCHHHHHHhhC----CeEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhh-c-CCCCCcCEEEEeCCchh
Confidence 78999999999999999887 477788888788888877631 22222 2211 1 2458999999865 666
Q ss_pred cCCCCcCHHHHHHHHhhcccCCcEEEEE
Q 006662 551 LYKDRCEMEDVLLEMDRILRPEGSVIIR 578 (636)
Q Consensus 551 ~~~~~c~~~~~l~e~dRiLrPgG~~i~~ 578 (636)
...+.-+...+|-++-|+|||||.+++.
T Consensus 109 ~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 136 (243)
T 3d2l_A 109 YLQTEADVKQTFDSAARLLTDGGKLLFD 136 (243)
T ss_dssp GCCSHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred hcCCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 5555556778999999999999999984
No 309
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=98.50 E-value=1.2e-07 Score=98.32 Aligned_cols=107 Identities=14% Similarity=0.094 Sum_probs=75.8
Q ss_pred HhhhccCCCCCcceEeeecccchhhhhhhcCC-CeEEEEecCCCCCccchHHHHhh----cccchhhccccccC--CCC-
Q 006662 466 SVDYQLAQPGRYRNLLDMNAYLGGFAAALVDD-PLWVMNTVPVEAKINTLGVIYER----GLIGTYQNWCEAMS--TYP- 537 (636)
Q Consensus 466 ~~~~~l~~~~~~r~vlD~~~g~ggfaa~l~~~-~v~~mnv~~~~~~~~~l~~~~eR----gli~~~~~~ce~~~--~yp- 537 (636)
.++..+..-....+|||+|||.|.++..|++. + ..|+.+|.++.++..+.++ |+-+-+.-.+..+. ++|
T Consensus 107 ~l~~~l~~~~~~~~vLDiGcG~G~~~~~la~~~~---~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~ 183 (312)
T 3vc1_A 107 FLMDHLGQAGPDDTLVDAGCGRGGSMVMAHRRFG---SRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFDK 183 (312)
T ss_dssp HHHTTSCCCCTTCEEEEESCTTSHHHHHHHHHHC---CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCT
T ss_pred HHHHHhccCCCCCEEEEecCCCCHHHHHHHHHcC---CEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCCC
Confidence 34444441145779999999999999999876 4 3566677777788877764 44221111122222 254
Q ss_pred CccceeeeccccccCCCCcCHHHHHHHHhhcccCCcEEEEEe
Q 006662 538 RTYDLIHADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRD 579 (636)
Q Consensus 538 ~t~Dl~H~~~~fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d 579 (636)
.+||+|.+.++|... +...+|-|+.|+|||||.+++.+
T Consensus 184 ~~fD~V~~~~~l~~~----~~~~~l~~~~~~LkpgG~l~~~~ 221 (312)
T 3vc1_A 184 GAVTASWNNESTMYV----DLHDLFSEHSRFLKVGGRYVTIT 221 (312)
T ss_dssp TCEEEEEEESCGGGS----CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCEeEEEECCchhhC----CHHHHHHHHHHHcCCCcEEEEEE
Confidence 899999998887754 28999999999999999999974
No 310
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=98.49 E-value=2e-07 Score=102.77 Aligned_cols=109 Identities=23% Similarity=0.312 Sum_probs=77.8
Q ss_pred HHHhhccCCCCCcEEEEeCCCCcHHHHHHhhc---CCEEEEcCcCCchHHHHHHHHHc----CCCeEEEEeccccCC-CC
Q 006662 208 IGKLINLKDGSIRTAIDTGCGVASWGAYLMSR---NILAVSFAPRDTHEAQVQFALER----GVPALIGVMASIRLP-YP 279 (636)
Q Consensus 208 L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~---~v~vv~i~p~Dis~a~l~~A~er----g~~~~~~~~d~~~Lp-f~ 279 (636)
+..++...++. +|||+|||+|..+..+++. ...++++ |+++.+++.++++ +..+.+...|...++ +.
T Consensus 93 ~a~~L~~~~g~--~VLDlgaGpG~kt~~LA~~~~~~g~V~Av---Dis~~~l~~a~~n~~r~G~~v~~~~~Da~~l~~~~ 167 (464)
T 3m6w_A 93 VGVLLDPKPGE--RVLDLAAAPGGKTTHLAARMGGKGLLLAN---EVDGKRVRGLLENVERWGAPLAVTQAPPRALAEAF 167 (464)
T ss_dssp HHHHHCCCTTC--EEEESSCTTCHHHHHHHHHTTTCSEEEEE---CSCHHHHHHHHHHHHHHCCCCEEECSCHHHHHHHH
T ss_pred HHHhcCcCCCC--EEEEEcCCcCHHHHHHHHhCCCCCEEEEE---ECCHHHHHHHHHHHHHcCCeEEEEECCHHHhhhhc
Confidence 34455555555 9999999999999999976 2456666 8899998887654 555777777776665 34
Q ss_pred CCCeeEEEe----c--cccc-------ccccC--------hHHHHHHHHhcccCCcEEEEEeC
Q 006662 280 SRAFDMAHC----S--RCLI-------PWGQY--------DGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 280 ~~sFDlV~~----s--~~L~-------h~~~d--------~~~~L~el~RvLKPGG~Liis~p 321 (636)
+++||+|++ + .++. .|..+ ...++.++.++|||||+|++++.
T Consensus 168 ~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTC 230 (464)
T 3m6w_A 168 GTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTC 230 (464)
T ss_dssp CSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEES
T ss_pred cccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 678999995 1 1111 11111 15689999999999999999875
No 311
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.49 E-value=3e-07 Score=97.01 Aligned_cols=100 Identities=16% Similarity=0.211 Sum_probs=75.1
Q ss_pred CCcEEEEeCCCCcHHHHHHhhcC-------CEEEEcCcCCchHHHHHHHHHc----CCCeEEEEeccccCCCCCCCeeEE
Q 006662 218 SIRTAIDTGCGVASWGAYLMSRN-------ILAVSFAPRDTHEAQVQFALER----GVPALIGVMASIRLPYPSRAFDMA 286 (636)
Q Consensus 218 ~~r~VLDIGCGtG~~a~~La~~~-------v~vv~i~p~Dis~a~l~~A~er----g~~~~~~~~d~~~Lpf~~~sFDlV 286 (636)
...+|||+|||+|.++..+++.. ..+.++ |+++.+++.|+.+ +..+.+..+|... +.+.+.||+|
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~Gi---Di~~~~~~~a~~n~~~~g~~~~i~~~D~l~-~~~~~~fD~I 205 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGV---DVDDLLISLALVGADLQRQKMTLLHQDGLA-NLLVDPVDVV 205 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEE---ESCHHHHHHHHHHHHHHTCCCEEEESCTTS-CCCCCCEEEE
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEE---ECCHHHHHHHHHHHHhCCCCceEEECCCCC-ccccCCccEE
Confidence 34589999999999999888752 344444 8888888888653 5567788877655 3346789999
Q ss_pred EecccccccccCh-----------------HHHHHHHHhcccCCcEEEEEeC
Q 006662 287 HCSRCLIPWGQYD-----------------GLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 287 ~~s~~L~h~~~d~-----------------~~~L~el~RvLKPGG~Liis~p 321 (636)
+++..+.++..+. ..++.++.+.|+|||++++..|
T Consensus 206 i~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p 257 (344)
T 2f8l_A 206 ISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVP 257 (344)
T ss_dssp EEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEEC
Confidence 9987764332111 2579999999999999999986
No 312
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=98.49 E-value=7.4e-07 Score=89.25 Aligned_cols=125 Identities=13% Similarity=0.115 Sum_probs=85.7
Q ss_pred HHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhcCC--EEEEcCcCCchHHHHHHHHHc----CC--CeEEEEeccccCC
Q 006662 206 DDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNI--LAVSFAPRDTHEAQVQFALER----GV--PALIGVMASIRLP 277 (636)
Q Consensus 206 d~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~~v--~vv~i~p~Dis~a~l~~A~er----g~--~~~~~~~d~~~Lp 277 (636)
+.+.+++ .++. +|||||||+|.++..+++.+. .++.+ |+++.+++.|+++ +. .+.+...|... +
T Consensus 7 ~~l~~~v--~~g~--~VlDIGtGsG~l~i~la~~~~~~~V~av---Di~~~al~~A~~N~~~~gl~~~i~~~~~d~l~-~ 78 (225)
T 3kr9_A 7 ELVASFV--SQGA--ILLDVGSDHAYLPIELVERGQIKSAIAG---EVVEGPYQSAVKNVEAHGLKEKIQVRLANGLA-A 78 (225)
T ss_dssp HHHHTTS--CTTE--EEEEETCSTTHHHHHHHHTTSEEEEEEE---ESSHHHHHHHHHHHHHTTCTTTEEEEECSGGG-G
T ss_pred HHHHHhC--CCCC--EEEEeCCCcHHHHHHHHHhCCCCEEEEE---ECCHHHHHHHHHHHHHcCCCceEEEEECchhh-h
Confidence 3445544 2343 899999999999999999863 34445 8898988888754 44 37777777632 2
Q ss_pred CCCC-CeeEEEecccccccccChHHHHHHHHhcccCCcEEEEEeCCCCccccccCCCCchhhhHHHHHHHHHHHHHhceE
Q 006662 278 YPSR-AFDMAHCSRCLIPWGQYDGLYLIEVDRVLRPGGYWILSGPPVNWESHWKGWNRTTEDLKSEQNGIETIARSLCWK 356 (636)
Q Consensus 278 f~~~-sFDlV~~s~~L~h~~~d~~~~L~el~RvLKPGG~Liis~p~~~w~~~~~~W~~t~e~l~~~~~~ie~la~~l~Wk 356 (636)
++.+ .||+|+.....-. -...++.+....|+|+|+|+++.. . ....+.+.....+|.
T Consensus 79 l~~~~~~D~IviaG~Gg~---~i~~Il~~~~~~L~~~~~lVlq~~------------~-------~~~~vr~~L~~~Gf~ 136 (225)
T 3kr9_A 79 FEETDQVSVITIAGMGGR---LIARILEEGLGKLANVERLILQPN------------N-------REDDLRIWLQDHGFQ 136 (225)
T ss_dssp CCGGGCCCEEEEEEECHH---HHHHHHHHTGGGCTTCCEEEEEES------------S-------CHHHHHHHHHHTTEE
T ss_pred cccCcCCCEEEEcCCChH---HHHHHHHHHHHHhCCCCEEEEECC------------C-------CHHHHHHHHHHCCCE
Confidence 3333 6999987553311 125788999999999999999843 0 123456667778897
Q ss_pred eecc
Q 006662 357 KLIQ 360 (636)
Q Consensus 357 ~v~~ 360 (636)
.+.+
T Consensus 137 i~~e 140 (225)
T 3kr9_A 137 IVAE 140 (225)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7654
No 313
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=98.48 E-value=5e-08 Score=94.03 Aligned_cols=135 Identities=14% Similarity=0.138 Sum_probs=87.9
Q ss_pred cceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhhcc----cchhh-ccccccCCCC-Cccceeeeccccc
Q 006662 477 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERGL----IGTYQ-NWCEAMSTYP-RTYDLIHADSIFS 550 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRgl----i~~~~-~~ce~~~~yp-~t~Dl~H~~~~fs 550 (636)
..+|||+|||.|.++..|++.+.- +|+.+|.++.++..+.++.- +-+.+ |.. .+ +++ .+||+|.+.++|.
T Consensus 43 ~~~vLdiGcG~G~~~~~l~~~~~~--~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~~-~~-~~~~~~fD~v~~~~~~~ 118 (215)
T 2pxx_A 43 EDRILVLGCGNSALSYELFLGGFP--NVTSVDYSSVVVAAMQACYAHVPQLRWETMDVR-KL-DFPSASFDVVLEKGTLD 118 (215)
T ss_dssp TCCEEEETCTTCSHHHHHHHTTCC--CEEEEESCHHHHHHHHHHTTTCTTCEEEECCTT-SC-CSCSSCEEEEEEESHHH
T ss_pred CCeEEEECCCCcHHHHHHHHcCCC--cEEEEeCCHHHHHHHHHhcccCCCcEEEEcchh-cC-CCCCCcccEEEECcchh
Confidence 568999999999999999877531 56666777778888877631 22222 222 22 344 7999999988875
Q ss_pred cCC------------CCcCHHHHHHHHhhcccCCcEEEEEeCHHHHHHHHHHH--hcCCCceEEeccCCCCCCcceEEEE
Q 006662 551 LYK------------DRCEMEDVLLEMDRILRPEGSVIIRDDVDILVKIKSIT--DGMEWEGRIADHENGPRQREKILFA 616 (636)
Q Consensus 551 ~~~------------~~c~~~~~l~e~dRiLrPgG~~i~~d~~~~~~~~~~~~--~~~~W~~~~~~~e~~~~~~~~~l~~ 616 (636)
... +.-+...+|.|+-|+|||||.+++.+....- ....++ ....|.......+++. .-.+.++
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 195 (215)
T 2pxx_A 119 ALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAAPH-FRTRHYAQAYYGWSLRHATYGSGF--HFHLYLM 195 (215)
T ss_dssp HHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCHH-HHHHHHCCGGGCEEEEEEEESGGG--CEEEEEE
T ss_pred hhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCCcH-HHHHHHhccccCcEEEEEEecCcc--eEEEEEE
Confidence 332 1224578999999999999999998754321 122332 3446876654443332 3446666
Q ss_pred Ee
Q 006662 617 NK 618 (636)
Q Consensus 617 ~K 618 (636)
+|
T Consensus 196 ~~ 197 (215)
T 2pxx_A 196 HK 197 (215)
T ss_dssp EE
T ss_pred Ee
Confidence 65
No 314
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=98.48 E-value=1.5e-07 Score=93.76 Aligned_cols=105 Identities=16% Similarity=0.099 Sum_probs=74.2
Q ss_pred hhhccCCCCCcceEeeecccchhhhhhhcCC--CeEEEEecCCCCCccchHHHHhhcc-cchhhccccccCCCCCcccee
Q 006662 467 VDYQLAQPGRYRNLLDMNAYLGGFAAALVDD--PLWVMNTVPVEAKINTLGVIYERGL-IGTYQNWCEAMSTYPRTYDLI 543 (636)
Q Consensus 467 ~~~~l~~~~~~r~vlD~~~g~ggfaa~l~~~--~v~~mnv~~~~~~~~~l~~~~eRgl-i~~~~~~ce~~~~yp~t~Dl~ 543 (636)
++..+.. ....+|||+|||.|.++..|.+. +. +|+.+|.++.++..+.++.- +-..+.=.+.++ .+.+||+|
T Consensus 25 l~~~~~~-~~~~~vLdiG~G~G~~~~~l~~~~~~~---~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~-~~~~fD~v 99 (259)
T 2p35_A 25 LLAQVPL-ERVLNGYDLGCGPGNSTELLTDRYGVN---VITGIDSDDDMLEKAADRLPNTNFGKADLATWK-PAQKADLL 99 (259)
T ss_dssp HHTTCCC-SCCSSEEEETCTTTHHHHHHHHHHCTT---SEEEEESCHHHHHHHHHHSTTSEEEECCTTTCC-CSSCEEEE
T ss_pred HHHhcCC-CCCCEEEEecCcCCHHHHHHHHhCCCC---EEEEEECCHHHHHHHHHhCCCcEEEECChhhcC-ccCCcCEE
Confidence 3333433 44678999999999999998765 32 34555666788888888721 112221112333 34899999
Q ss_pred eeccccccCCCCcCHHHHHHHHhhcccCCcEEEEEe
Q 006662 544 HADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRD 579 (636)
Q Consensus 544 H~~~~fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d 579 (636)
++..+|.... +.+.+|.|+.|+|||||++++..
T Consensus 100 ~~~~~l~~~~---~~~~~l~~~~~~L~pgG~l~~~~ 132 (259)
T 2p35_A 100 YANAVFQWVP---DHLAVLSQLMDQLESGGVLAVQM 132 (259)
T ss_dssp EEESCGGGST---THHHHHHHHGGGEEEEEEEEEEE
T ss_pred EEeCchhhCC---CHHHHHHHHHHhcCCCeEEEEEe
Confidence 9988777553 56899999999999999999985
No 315
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.48 E-value=2.6e-07 Score=87.31 Aligned_cols=137 Identities=13% Similarity=0.100 Sum_probs=91.7
Q ss_pred cceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhhcc-cchhh-ccccccCCCC-Cccceeeec-cccccC
Q 006662 477 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERGL-IGTYQ-NWCEAMSTYP-RTYDLIHAD-SIFSLY 552 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRgl-i~~~~-~~ce~~~~yp-~t~Dl~H~~-~~fs~~ 552 (636)
..+|||+|||.|.++..|.+.+. +|+.+|.++.++..+.++.- +..++ |..+ + ++| .+||+|.++ .++...
T Consensus 47 ~~~vLdiG~G~G~~~~~l~~~~~---~v~~~D~~~~~~~~a~~~~~~~~~~~~d~~~-~-~~~~~~~D~i~~~~~~~~~~ 121 (195)
T 3cgg_A 47 GAKILDAGCGQGRIGGYLSKQGH---DVLGTDLDPILIDYAKQDFPEARWVVGDLSV-D-QISETDFDLIVSAGNVMGFL 121 (195)
T ss_dssp TCEEEEETCTTTHHHHHHHHTTC---EEEEEESCHHHHHHHHHHCTTSEEEECCTTT-S-CCCCCCEEEEEECCCCGGGS
T ss_pred CCeEEEECCCCCHHHHHHHHCCC---cEEEEcCCHHHHHHHHHhCCCCcEEEccccc-C-CCCCCceeEEEECCcHHhhc
Confidence 56899999999999999988754 66777777678887777631 22222 2221 1 244 789999997 455543
Q ss_pred CCCcCHHHHHHHHhhcccCCcEEEEEeCHH---HHHHHHHHHhcCCCceEEeccC--CCC---CCcceEEEEEec
Q 006662 553 KDRCEMEDVLLEMDRILRPEGSVIIRDDVD---ILVKIKSITDGMEWEGRIADHE--NGP---RQREKILFANKK 619 (636)
Q Consensus 553 ~~~c~~~~~l~e~dRiLrPgG~~i~~d~~~---~~~~~~~~~~~~~W~~~~~~~e--~~~---~~~~~~l~~~K~ 619 (636)
..-+...+|.++-|+|+|||.+++..... ....+.++++...+++...... ..+ ..+.-+++++|+
T Consensus 122 -~~~~~~~~l~~~~~~l~~~G~l~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~~~~~~~v~~k~ 195 (195)
T 3cgg_A 122 -AEDGREPALANIHRALGADGRAVIGFGAGRGWVFGDFLEVAERVGLELENAFESWDLKPFVQGSEFLVAVFTKK 195 (195)
T ss_dssp -CHHHHHHHHHHHHHHEEEEEEEEEEEETTSSCCHHHHHHHHHHHTEEEEEEESSTTCCBCCTTCSEEEEEEEEC
T ss_pred -ChHHHHHHHHHHHHHhCCCCEEEEEeCCCCCcCHHHHHHHHHHcCCEEeeeecccccCcCCCCCcEEEEEEecC
Confidence 22235789999999999999999975432 4567777777777776643221 111 234557777774
No 316
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=98.48 E-value=4e-07 Score=92.09 Aligned_cols=163 Identities=12% Similarity=0.013 Sum_probs=103.1
Q ss_pred hhhHHHHHHHHHHHHHhhhccCCCCCcceEeeecccchhhhhhhcCC-CeEEEEecCCCCCccchHHHHhh----cc--c
Q 006662 451 REDTALWKKRVTYYKSVDYQLAQPGRYRNLLDMNAYLGGFAAALVDD-PLWVMNTVPVEAKINTLGVIYER----GL--I 523 (636)
Q Consensus 451 ~~d~~~w~~~v~~y~~~~~~l~~~~~~r~vlD~~~g~ggfaa~l~~~-~v~~mnv~~~~~~~~~l~~~~eR----gl--i 523 (636)
....+.|.+++..-..++..+.. ....+|||+|||.|..+..|+.. +- ..|+.+|.++.++.++.+. |+ +
T Consensus 56 ~~~~~~~~~~~~ds~~~l~~~~~-~~~~~vLDiG~G~G~~~i~la~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~l~~v 132 (249)
T 3g89_A 56 RGEEEVVVKHFLDSLTLLRLPLW-QGPLRVLDLGTGAGFPGLPLKIVRPE--LELVLVDATRKKVAFVERAIEVLGLKGA 132 (249)
T ss_dssp -CHHHHHHHHHHHHHGGGGSSCC-CSSCEEEEETCTTTTTHHHHHHHCTT--CEEEEEESCHHHHHHHHHHHHHHTCSSE
T ss_pred CCHHHHhhceeeechhhhccccc-CCCCEEEEEcCCCCHHHHHHHHHCCC--CEEEEEECCHHHHHHHHHHHHHhCCCce
Confidence 34456777766543343433333 34678999999999998887653 22 2455667666777776654 55 3
Q ss_pred chhhccccccCC---CCCccceeeeccccccCCCCcCHHHHHHHHhhcccCCcEEEEEe---CHHHHHHHHHHHhcCCCc
Q 006662 524 GTYQNWCEAMST---YPRTYDLIHADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRD---DVDILVKIKSITDGMEWE 597 (636)
Q Consensus 524 ~~~~~~ce~~~~---yp~t~Dl~H~~~~fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d---~~~~~~~~~~~~~~~~W~ 597 (636)
-+++.-.+.+.. ++.+||+|-+..+ .+++.++-++-|+|||||.+++-. ..+.+..+++.++.+.|+
T Consensus 133 ~~~~~d~~~~~~~~~~~~~fD~I~s~a~-------~~~~~ll~~~~~~LkpgG~l~~~~g~~~~~e~~~~~~~l~~~G~~ 205 (249)
T 3g89_A 133 RALWGRAEVLAREAGHREAYARAVARAV-------APLCVLSELLLPFLEVGGAAVAMKGPRVEEELAPLPPALERLGGR 205 (249)
T ss_dssp EEEECCHHHHTTSTTTTTCEEEEEEESS-------CCHHHHHHHHGGGEEEEEEEEEEECSCCHHHHTTHHHHHHHHTEE
T ss_pred EEEECcHHHhhcccccCCCceEEEECCc-------CCHHHHHHHHHHHcCCCeEEEEEeCCCcHHHHHHHHHHHHHcCCe
Confidence 344422233332 3479999988543 467899999999999999998854 356777777778888887
Q ss_pred eEEec-c-CCCCCCcceEEEEEecCCCC
Q 006662 598 GRIAD-H-ENGPRQREKILFANKKYWTA 623 (636)
Q Consensus 598 ~~~~~-~-e~~~~~~~~~l~~~K~~w~~ 623 (636)
..-.. - -.+....-.+++.+|.=.++
T Consensus 206 ~~~~~~~~~p~~~~~R~l~~~~k~~~t~ 233 (249)
T 3g89_A 206 LGEVLALQLPLSGEARHLVVLEKTAPTP 233 (249)
T ss_dssp EEEEEEEECTTTCCEEEEEEEEECSCCC
T ss_pred EEEEEEeeCCCCCCcEEEEEEEeCCCCC
Confidence 65322 1 11222334566677755444
No 317
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=98.47 E-value=2e-07 Score=89.60 Aligned_cols=93 Identities=18% Similarity=0.176 Sum_probs=68.7
Q ss_pred eEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhh----cc-cchhh-ccccccCCCC-Cccceeeecccccc
Q 006662 479 NLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GL-IGTYQ-NWCEAMSTYP-RTYDLIHADSIFSL 551 (636)
Q Consensus 479 ~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl-i~~~~-~~ce~~~~yp-~t~Dl~H~~~~fs~ 551 (636)
+|||+|||.|.++.+|++.+. +|+.+|.++.++..+.++ |+ +..+. |. +.+ .+| .+||+|.+. |..
T Consensus 32 ~vLdiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~-~~~-~~~~~~fD~v~~~--~~~ 104 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASLGY---EVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNL-ADF-DIVADAWEGIVSI--FCH 104 (202)
T ss_dssp EEEECCCSCTHHHHHHHTTTC---EEEEECSSHHHHHHHHHHHHHHTCCEEEECCBT-TTB-SCCTTTCSEEEEE--CCC
T ss_pred CEEEECCCCCHhHHHHHhCCC---eEEEEECCHHHHHHHHHHHHhcCCceEEEEcCh-hhc-CCCcCCccEEEEE--hhc
Confidence 999999999999999998864 777788887888888776 33 22222 21 222 244 799999883 332
Q ss_pred CCCCcCHHHHHHHHhhcccCCcEEEEEe
Q 006662 552 YKDRCEMEDVLLEMDRILRPEGSVIIRD 579 (636)
Q Consensus 552 ~~~~c~~~~~l~e~dRiLrPgG~~i~~d 579 (636)
+ ..-+...+|.++-|+|||||.+++.+
T Consensus 105 ~-~~~~~~~~l~~~~~~L~pgG~l~~~~ 131 (202)
T 2kw5_A 105 L-PSSLRQQLYPKVYQGLKPGGVFILEG 131 (202)
T ss_dssp C-CHHHHHHHHHHHHTTCCSSEEEEEEE
T ss_pred C-CHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 2 33356789999999999999999984
No 318
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.47 E-value=1.7e-07 Score=94.35 Aligned_cols=96 Identities=22% Similarity=0.352 Sum_probs=72.1
Q ss_pred cceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhhcccchhh--ccccccCCCC-CccceeeeccccccCC
Q 006662 477 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERGLIGTYQ--NWCEAMSTYP-RTYDLIHADSIFSLYK 553 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRgli~~~~--~~ce~~~~yp-~t~Dl~H~~~~fs~~~ 553 (636)
..+|||+|||.|.++..|.+.+. +|+.+|.++.++..+.++.. +.+. |. +.+ ++| .+||+|-+.+++-.+.
T Consensus 55 ~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~l~~a~~~~~-~~~~~~d~-~~~-~~~~~~fD~v~~~~~~~~~~ 128 (260)
T 2avn_A 55 PCRVLDLGGGTGKWSLFLQERGF---EVVLVDPSKEMLEVAREKGV-KNVVEAKA-EDL-PFPSGAFEAVLALGDVLSYV 128 (260)
T ss_dssp CCEEEEETCTTCHHHHHHHTTTC---EEEEEESCHHHHHHHHHHTC-SCEEECCT-TSC-CSCTTCEEEEEECSSHHHHC
T ss_pred CCeEEEeCCCcCHHHHHHHHcCC---eEEEEeCCHHHHHHHHhhcC-CCEEECcH-HHC-CCCCCCEEEEEEcchhhhcc
Confidence 56899999999999999998864 67777888889999988865 2111 11 222 244 7999999876443332
Q ss_pred CCcCHHHHHHHHhhcccCCcEEEEEeC
Q 006662 554 DRCEMEDVLLEMDRILRPEGSVIIRDD 580 (636)
Q Consensus 554 ~~c~~~~~l~e~dRiLrPgG~~i~~d~ 580 (636)
. +...+|-|+.|+|||||.+++...
T Consensus 129 ~--~~~~~l~~~~~~LkpgG~l~~~~~ 153 (260)
T 2avn_A 129 E--NKDKAFSEIRRVLVPDGLLIATVD 153 (260)
T ss_dssp S--CHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred c--cHHHHHHHHHHHcCCCeEEEEEeC
Confidence 2 278999999999999999999754
No 319
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.47 E-value=2.7e-07 Score=93.21 Aligned_cols=98 Identities=13% Similarity=0.048 Sum_probs=74.4
Q ss_pred CCCcEEEEeCCCCcHHHHHHhhcCCEEEEcCcCCchHHHHHHHHHc----CCCeEEEEeccccCCCCCCCeeEEEecccc
Q 006662 217 GSIRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALER----GVPALIGVMASIRLPYPSRAFDMAHCSRCL 292 (636)
Q Consensus 217 g~~r~VLDIGCGtG~~a~~La~~~v~vv~i~p~Dis~a~l~~A~er----g~~~~~~~~d~~~Lpf~~~sFDlV~~s~~L 292 (636)
+.+.+|||||||+|.++..+. ....++.+ |++..++++++++ +.+..+.+.|....+.+. +||+|++.-++
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~-~~~~y~a~---DId~~~i~~ar~~~~~~g~~~~~~v~D~~~~~~~~-~~DvvLllk~l 178 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER-GIASVWGC---DIHQGLGDVITPFAREKDWDFTFALQDVLCAPPAE-AGDLALIFKLL 178 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT-TCSEEEEE---ESBHHHHHHHHHHHHHTTCEEEEEECCTTTSCCCC-BCSEEEEESCH
T ss_pred CCCCeEEEecCCccHHHHHhc-cCCeEEEE---eCCHHHHHHHHHHHHhcCCCceEEEeecccCCCCC-CcchHHHHHHH
Confidence 345699999999999999888 55555666 8899999888654 677888888887777654 89999999888
Q ss_pred cccccChHHHHHHHHhcccCCcEEEEE
Q 006662 293 IPWGQYDGLYLIEVDRVLRPGGYWILS 319 (636)
Q Consensus 293 ~h~~~d~~~~L~el~RvLKPGG~Liis 319 (636)
++..........++...|+++|.++-.
T Consensus 179 h~LE~q~~~~~~~ll~aL~~~~vvVsf 205 (253)
T 3frh_A 179 PLLEREQAGSAMALLQSLNTPRMAVSF 205 (253)
T ss_dssp HHHHHHSTTHHHHHHHHCBCSEEEEEE
T ss_pred HHhhhhchhhHHHHHHHhcCCCEEEEc
Confidence 555433334444888899999766554
No 320
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=98.47 E-value=1.2e-07 Score=92.28 Aligned_cols=98 Identities=12% Similarity=0.161 Sum_probs=75.5
Q ss_pred CcceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhhcccchhh-ccccccCCCC-CccceeeeccccccCC
Q 006662 476 RYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERGLIGTYQ-NWCEAMSTYP-RTYDLIHADSIFSLYK 553 (636)
Q Consensus 476 ~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRgli~~~~-~~ce~~~~yp-~t~Dl~H~~~~fs~~~ 553 (636)
...+|||+|||.|.++.+|.+.+ .+++.+|.++.++..+.++.. ..++ |..+...+++ .+||+|.+.+++....
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~~---~~~~~~D~~~~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~fD~v~~~~~l~~~~ 107 (230)
T 3cc8_A 32 EWKEVLDIGCSSGALGAAIKENG---TRVSGIEAFPEAAEQAKEKLD-HVVLGDIETMDMPYEEEQFDCVIFGDVLEHLF 107 (230)
T ss_dssp TCSEEEEETCTTSHHHHHHHTTT---CEEEEEESSHHHHHHHHTTSS-EEEESCTTTCCCCSCTTCEEEEEEESCGGGSS
T ss_pred CCCcEEEeCCCCCHHHHHHHhcC---CeEEEEeCCHHHHHHHHHhCC-cEEEcchhhcCCCCCCCccCEEEECChhhhcC
Confidence 46799999999999999999886 467777887778888877753 2222 3332224555 8999999988887554
Q ss_pred CCcCHHHHHHHHhhcccCCcEEEEEeC
Q 006662 554 DRCEMEDVLLEMDRILRPEGSVIIRDD 580 (636)
Q Consensus 554 ~~c~~~~~l~e~dRiLrPgG~~i~~d~ 580 (636)
+.+.+|.++-|+|+|||++++...
T Consensus 108 ---~~~~~l~~~~~~L~~gG~l~~~~~ 131 (230)
T 3cc8_A 108 ---DPWAVIEKVKPYIKQNGVILASIP 131 (230)
T ss_dssp ---CHHHHHHHTGGGEEEEEEEEEEEE
T ss_pred ---CHHHHHHHHHHHcCCCCEEEEEeC
Confidence 458999999999999999999753
No 321
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=98.47 E-value=7.1e-07 Score=96.00 Aligned_cols=99 Identities=11% Similarity=-0.005 Sum_probs=74.5
Q ss_pred cEEEEeCCCCcHHHHHHhhcCC-EEEEcCcCCchHHHHHHHHHc----CC--CeEEEEeccccCCC----CCCCeeEEEe
Q 006662 220 RTAIDTGCGVASWGAYLMSRNI-LAVSFAPRDTHEAQVQFALER----GV--PALIGVMASIRLPY----PSRAFDMAHC 288 (636)
Q Consensus 220 r~VLDIGCGtG~~a~~La~~~v-~vv~i~p~Dis~a~l~~A~er----g~--~~~~~~~d~~~Lpf----~~~sFDlV~~ 288 (636)
.+|||+|||+|.++..+++.+. .++++ |+++.+++.|+++ +. ++.+..+|...... ..++||+|++
T Consensus 219 ~~VLDl~~G~G~~~~~la~~g~~~v~~v---D~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~ 295 (396)
T 2as0_A 219 DRVLDVFTYTGGFAIHAAIAGADEVIGI---DKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVL 295 (396)
T ss_dssp CEEEETTCTTTHHHHHHHHTTCSEEEEE---ESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CeEEEecCCCCHHHHHHHHCCCCEEEEE---eCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEEE
Confidence 4999999999999999999854 66666 8898888887644 44 57888888755421 2578999998
Q ss_pred ccccccc--------ccChHHHHHHHHhcccCCcEEEEEeC
Q 006662 289 SRCLIPW--------GQYDGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 289 s~~L~h~--------~~d~~~~L~el~RvLKPGG~Liis~p 321 (636)
....... ..+...++.++.++|+|||+++++..
T Consensus 296 dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 336 (396)
T 2as0_A 296 DPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSC 336 (396)
T ss_dssp CCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEEC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEC
Confidence 5432111 12235788999999999999999865
No 322
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=98.46 E-value=4e-07 Score=91.91 Aligned_cols=122 Identities=16% Similarity=0.195 Sum_probs=89.1
Q ss_pred CcceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhh----cc---cchhh-ccccccCCCC-Cccceeeec
Q 006662 476 RYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GL---IGTYQ-NWCEAMSTYP-RTYDLIHAD 546 (636)
Q Consensus 476 ~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl---i~~~~-~~ce~~~~yp-~t~Dl~H~~ 546 (636)
...+|||+|||.|.++..|+++.-. +|+.+|.++.++..+.++ |+ +-+++ |..+....++ .+||+|-++
T Consensus 49 ~~~~vLDlG~G~G~~~~~la~~~~~--~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii~n 126 (259)
T 3lpm_A 49 RKGKIIDLCSGNGIIPLLLSTRTKA--KIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIVTCN 126 (259)
T ss_dssp SCCEEEETTCTTTHHHHHHHTTCCC--EEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEEEEEEC
T ss_pred CCCEEEEcCCchhHHHHHHHHhcCC--cEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCccEEEEC
Confidence 3678999999999999999887432 677888877788777665 44 33333 4333333354 899999997
Q ss_pred cccccC-----------------CCCcCHHHHHHHHhhcccCCcEEEEEeCHHHHHHHHHHHhcCCCceE
Q 006662 547 SIFSLY-----------------KDRCEMEDVLLEMDRILRPEGSVIIRDDVDILVKIKSITDGMEWEGR 599 (636)
Q Consensus 547 ~~fs~~-----------------~~~c~~~~~l~e~dRiLrPgG~~i~~d~~~~~~~~~~~~~~~~W~~~ 599 (636)
--|... ...+.++.++.++-|+|||||.+++--..+.+..+.+.++...|...
T Consensus 127 pPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~~~~~~~~ 196 (259)
T 3lpm_A 127 PPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRPERLLDIIDIMRKYRLEPK 196 (259)
T ss_dssp CCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEECTTTHHHHHHHHHHTTEEEE
T ss_pred CCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcHHHHHHHHHHHHHCCCceE
Confidence 554221 22356778999999999999999998777777888888888888765
No 323
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=98.46 E-value=6.7e-08 Score=95.04 Aligned_cols=118 Identities=14% Similarity=0.117 Sum_probs=80.5
Q ss_pred HHHHHHHHHHHHhhhccCCCCCcceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhhcc-cchhh-ccccc
Q 006662 455 ALWKKRVTYYKSVDYQLAQPGRYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERGL-IGTYQ-NWCEA 532 (636)
Q Consensus 455 ~~w~~~v~~y~~~~~~l~~~~~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRgl-i~~~~-~~ce~ 532 (636)
..|......+..++..... ...+|||+|||.|.++..|++... +|+.+|.++.++..+.++.- +..++ |.. .
T Consensus 21 ~~~~~~~~~~~~~l~~~~~--~~~~vLdiG~G~G~~~~~l~~~~~---~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~-~ 94 (239)
T 3bxo_A 21 KDYAAEASDIADLVRSRTP--EASSLLDVACGTGTHLEHFTKEFG---DTAGLELSEDMLTHARKRLPDATLHQGDMR-D 94 (239)
T ss_dssp CCHHHHHHHHHHHHHHHCT--TCCEEEEETCTTSHHHHHHHHHHS---EEEEEESCHHHHHHHHHHCTTCEEEECCTT-T
T ss_pred hhHHHHHHHHHHHHHHhcC--CCCeEEEecccCCHHHHHHHHhCC---cEEEEeCCHHHHHHHHHhCCCCEEEECCHH-H
Confidence 3455555544454433222 256899999999999999987643 56777887789988888731 22222 221 2
Q ss_pred cCCCCCccceeee-ccccccCCCCcCHHHHHHHHhhcccCCcEEEEEe
Q 006662 533 MSTYPRTYDLIHA-DSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRD 579 (636)
Q Consensus 533 ~~~yp~t~Dl~H~-~~~fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d 579 (636)
++ ++.+||+|.| .++|....+.-+...+|.++-|+|||||.+++.+
T Consensus 95 ~~-~~~~~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 141 (239)
T 3bxo_A 95 FR-LGRKFSAVVSMFSSVGYLKTTEELGAAVASFAEHLEPGGVVVVEP 141 (239)
T ss_dssp CC-CSSCEEEEEECTTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred cc-cCCCCcEEEEcCchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 22 2689999995 4466654444466799999999999999999974
No 324
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=98.46 E-value=6.1e-07 Score=99.36 Aligned_cols=109 Identities=13% Similarity=0.120 Sum_probs=78.0
Q ss_pred HHHhhccC--CCCCcEEEEeCCCCcHHHHHHhhc---CCEEEEcCcCCchHHHHHHHHHc----CC-CeEEEEeccccCC
Q 006662 208 IGKLINLK--DGSIRTAIDTGCGVASWGAYLMSR---NILAVSFAPRDTHEAQVQFALER----GV-PALIGVMASIRLP 277 (636)
Q Consensus 208 L~~lL~l~--~g~~r~VLDIGCGtG~~a~~La~~---~v~vv~i~p~Dis~a~l~~A~er----g~-~~~~~~~d~~~Lp 277 (636)
+..++... ++. +|||+|||+|..+..+++. ...++++ |+++.+++.++++ +. ++.+...|...++
T Consensus 107 ~~~~L~~~~~~g~--~VLDl~aGpG~kt~~lA~~~~~~g~V~av---Dis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~ 181 (479)
T 2frx_A 107 PVAALFADGNAPQ--RVMDVAAAPGSKTTQISARMNNEGAILAN---EFSASRVKVLHANISRCGISNVALTHFDGRVFG 181 (479)
T ss_dssp HHHHHTTTTCCCS--EEEESSCTTSHHHHHHHHHTTTCSEEEEE---CSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHH
T ss_pred HHHHhCcccCCCC--EEEEeCCCCCHHHHHHHHhCCCCCEEEEE---ECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhh
Confidence 34445444 444 9999999999999999986 2456666 8899998887654 44 5778878877665
Q ss_pred C-CCCCeeEEEec------cccc-------ccccC--------hHHHHHHHHhcccCCcEEEEEeC
Q 006662 278 Y-PSRAFDMAHCS------RCLI-------PWGQY--------DGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 278 f-~~~sFDlV~~s------~~L~-------h~~~d--------~~~~L~el~RvLKPGG~Liis~p 321 (636)
. .+++||+|++. .++. +|..+ ...+|.++.++|||||+|++++.
T Consensus 182 ~~~~~~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTc 247 (479)
T 2frx_A 182 AAVPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTC 247 (479)
T ss_dssp HHSTTCEEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred hhccccCCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecc
Confidence 3 45789999972 1121 11110 14689999999999999999875
No 325
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=98.45 E-value=5.7e-07 Score=90.15 Aligned_cols=134 Identities=14% Similarity=0.166 Sum_probs=86.8
Q ss_pred CcceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhhcc-cc-----hhhccc-cccCCCCCccceeeeccc
Q 006662 476 RYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERGL-IG-----TYQNWC-EAMSTYPRTYDLIHADSI 548 (636)
Q Consensus 476 ~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRgl-i~-----~~~~~c-e~~~~yp~t~Dl~H~~~~ 548 (636)
...+|||+|||+|+|+..|++.+. -.|+.+|.+++++..+..+.- +. .+...+ +.+.. .-||.+-++.+
T Consensus 37 ~g~~VLDiGcGtG~~t~~la~~g~--~~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~--~~~d~~~~D~v 112 (232)
T 3opn_A 37 NGKTCLDIGSSTGGFTDVMLQNGA--KLVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQ--GRPSFTSIDVS 112 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTC--SEEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCS--CCCSEEEECCS
T ss_pred CCCEEEEEccCCCHHHHHHHhcCC--CEEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHcCc--CCCCEEEEEEE
Confidence 356899999999999999998864 267778888889988766432 11 111111 22222 12344444445
Q ss_pred cccCCCCcCHHHHHHHHhhcccCCcEEEEEeC-------------------H---HHHHHHHHHHhcCCCceEEeccC--
Q 006662 549 FSLYKDRCEMEDVLLEMDRILRPEGSVIIRDD-------------------V---DILVKIKSITDGMEWEGRIADHE-- 604 (636)
Q Consensus 549 fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~-------------------~---~~~~~~~~~~~~~~W~~~~~~~e-- 604 (636)
|+. +..+|-|+-|+|||||.+++... . .....+.++++...|++.-.+..
T Consensus 113 ~~~------l~~~l~~i~rvLkpgG~lv~~~~p~~e~~~~~~~~~G~~~d~~~~~~~~~~l~~~l~~aGf~v~~~~~~pi 186 (232)
T 3opn_A 113 FIS------LDLILPPLYEILEKNGEVAALIKPQFEAGREQVGKNGIIRDPKVHQMTIEKVLKTATQLGFSVKGLTFSPI 186 (232)
T ss_dssp SSC------GGGTHHHHHHHSCTTCEEEEEECHHHHSCHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHTEEEEEEEECSS
T ss_pred hhh------HHHHHHHHHHhccCCCEEEEEECcccccCHHHhCcCCeecCcchhHHHHHHHHHHHHHCCCEEEEEEEccC
Confidence 543 37899999999999999998611 1 24566777788888887754432
Q ss_pred CCCC-CcceEEEEEec
Q 006662 605 NGPR-QREKILFANKK 619 (636)
Q Consensus 605 ~~~~-~~~~~l~~~K~ 619 (636)
.|+. +.|.++.++|.
T Consensus 187 ~g~~gn~e~l~~~~~~ 202 (232)
T 3opn_A 187 KGGAGNVEFLVHLLKD 202 (232)
T ss_dssp CBTTTBCCEEEEEEES
T ss_pred CCCCCCHHHHHHHhhc
Confidence 2222 45677777773
No 326
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.44 E-value=4.9e-07 Score=91.05 Aligned_cols=85 Identities=12% Similarity=0.156 Sum_probs=65.6
Q ss_pred HHHHHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhcCCEEEEcCcCCchHHHHHHHHHcC---CCeEEEEeccccCCC
Q 006662 202 DAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALERG---VPALIGVMASIRLPY 278 (636)
Q Consensus 202 ~~~id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~~v~vv~i~p~Dis~a~l~~A~erg---~~~~~~~~d~~~Lpf 278 (636)
...++.+.+.+...++. +|||||||+|.++..+++++..++++ |+++.+++.++++. .++.+..+|...+++
T Consensus 16 ~~~~~~i~~~~~~~~~~--~VLDiG~G~G~lt~~l~~~~~~v~~v---D~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~~ 90 (244)
T 1qam_A 16 KHNIDKIMTNIRLNEHD--NIFEIGSGKGHFTLELVQRCNFVTAI---EIDHKLCKTTENKLVDHDNFQVLNKDILQFKF 90 (244)
T ss_dssp HHHHHHHHTTCCCCTTC--EEEEECCTTSHHHHHHHHHSSEEEEE---CSCHHHHHHHHHHTTTCCSEEEECCCGGGCCC
T ss_pred HHHHHHHHHhCCCCCCC--EEEEEeCCchHHHHHHHHcCCeEEEE---ECCHHHHHHHHHhhccCCCeEEEEChHHhCCc
Confidence 44566777776655554 89999999999999999998777777 99999999988764 368889999999888
Q ss_pred CC-CCeeEEEecccc
Q 006662 279 PS-RAFDMAHCSRCL 292 (636)
Q Consensus 279 ~~-~sFDlV~~s~~L 292 (636)
++ ..| .|+++..+
T Consensus 91 ~~~~~~-~vv~nlPy 104 (244)
T 1qam_A 91 PKNQSY-KIFGNIPY 104 (244)
T ss_dssp CSSCCC-EEEEECCG
T ss_pred ccCCCe-EEEEeCCc
Confidence 74 456 45555433
No 327
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.44 E-value=1.8e-06 Score=94.14 Aligned_cols=92 Identities=21% Similarity=0.272 Sum_probs=70.0
Q ss_pred cEEEEeCCCCcHHHHHHhhcCCEEEEcCcCCchHHHHHHHHHc----CCCeEEEEeccccCCCCCCCeeEEEeccccccc
Q 006662 220 RTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALER----GVPALIGVMASIRLPYPSRAFDMAHCSRCLIPW 295 (636)
Q Consensus 220 r~VLDIGCGtG~~a~~La~~~v~vv~i~p~Dis~a~l~~A~er----g~~~~~~~~d~~~Lpf~~~sFDlV~~s~~L~h~ 295 (636)
.+|||+|||+|.++..|++.+..++++ |+++.+++.|+++ +..+.+..+|...+... +||+|++......
T Consensus 292 ~~VLDlgcG~G~~sl~la~~~~~V~gv---D~s~~ai~~A~~n~~~ngl~v~~~~~d~~~~~~~--~fD~Vv~dPPr~g- 365 (425)
T 2jjq_A 292 EKILDMYSGVGTFGIYLAKRGFNVKGF---DSNEFAIEMARRNVEINNVDAEFEVASDREVSVK--GFDTVIVDPPRAG- 365 (425)
T ss_dssp SEEEEETCTTTHHHHHHHHTTCEEEEE---ESCHHHHHHHHHHHHHHTCCEEEEECCTTTCCCT--TCSEEEECCCTTC-
T ss_pred CEEEEeeccchHHHHHHHHcCCEEEEE---ECCHHHHHHHHHHHHHcCCcEEEEECChHHcCcc--CCCEEEEcCCccc-
Confidence 489999999999999999987777777 8899998888654 44578888888776432 8999998653311
Q ss_pred ccChHHHHHHHHhcccCCcEEEEEe
Q 006662 296 GQYDGLYLIEVDRVLRPGGYWILSG 320 (636)
Q Consensus 296 ~~d~~~~L~el~RvLKPGG~Liis~ 320 (636)
....++..+. .|+|||.++++.
T Consensus 366 --~~~~~~~~l~-~l~p~givyvsc 387 (425)
T 2jjq_A 366 --LHPRLVKRLN-REKPGVIVYVSC 387 (425)
T ss_dssp --SCHHHHHHHH-HHCCSEEEEEES
T ss_pred --hHHHHHHHHH-hcCCCcEEEEEC
Confidence 1234666654 599999999994
No 328
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.44 E-value=9.8e-07 Score=96.33 Aligned_cols=110 Identities=13% Similarity=0.139 Sum_probs=80.5
Q ss_pred HHHHHHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhcCCEEEEcCcCCchHHHHHHHHHc----CC-CeEEEEecccc
Q 006662 201 ADAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALER----GV-PALIGVMASIR 275 (636)
Q Consensus 201 ~~~~id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~~v~vv~i~p~Dis~a~l~~A~er----g~-~~~~~~~d~~~ 275 (636)
.+.+++.+.+.+...++. +|||+|||+|.++..|++.+..++++ |+++.+++.|+++ +. ++.+..+|...
T Consensus 271 ~e~l~~~~~~~l~~~~~~--~VLDlgcG~G~~~~~la~~~~~V~gv---D~s~~al~~A~~n~~~~~~~~v~f~~~d~~~ 345 (433)
T 1uwv_A 271 NQKMVARALEWLDVQPED--RVLDLFCGMGNFTLPLATQAASVVGV---EGVPALVEKGQQNARLNGLQNVTFYHENLEE 345 (433)
T ss_dssp HHHHHHHHHHHHTCCTTC--EEEEESCTTTTTHHHHHTTSSEEEEE---ESCHHHHHHHHHHHHHTTCCSEEEEECCTTS
T ss_pred HHHHHHHHHHhhcCCCCC--EEEECCCCCCHHHHHHHhhCCEEEEE---eCCHHHHHHHHHHHHHcCCCceEEEECCHHH
Confidence 445666666666544444 89999999999999999987777777 8899999888654 33 58888888766
Q ss_pred ----CCCCCCCeeEEEecccccccccChHHHHHHHHhcccCCcEEEEEe
Q 006662 276 ----LPYPSRAFDMAHCSRCLIPWGQYDGLYLIEVDRVLRPGGYWILSG 320 (636)
Q Consensus 276 ----Lpf~~~sFDlV~~s~~L~h~~~d~~~~L~el~RvLKPGG~Liis~ 320 (636)
+++++++||+|++..-... . ..++..+.+ ++|++.++++.
T Consensus 346 ~l~~~~~~~~~fD~Vv~dPPr~g---~-~~~~~~l~~-~~p~~ivyvsc 389 (433)
T 1uwv_A 346 DVTKQPWAKNGFDKVLLDPARAG---A-AGVMQQIIK-LEPIRIVYVSC 389 (433)
T ss_dssp CCSSSGGGTTCCSEEEECCCTTC---C-HHHHHHHHH-HCCSEEEEEES
T ss_pred HhhhhhhhcCCCCEEEECCCCcc---H-HHHHHHHHh-cCCCeEEEEEC
Confidence 3456678999998653311 1 345555543 78999999884
No 329
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=98.44 E-value=2.1e-07 Score=96.78 Aligned_cols=132 Identities=11% Similarity=0.081 Sum_probs=85.7
Q ss_pred CCcceEeeecccchhhhhhhcCC-CeEEEEecCCCCCccchHHHHhh----cccchhhccccccCCCC-Cccceeeeccc
Q 006662 475 GRYRNLLDMNAYLGGFAAALVDD-PLWVMNTVPVEAKINTLGVIYER----GLIGTYQNWCEAMSTYP-RTYDLIHADSI 548 (636)
Q Consensus 475 ~~~r~vlD~~~g~ggfaa~l~~~-~v~~mnv~~~~~~~~~l~~~~eR----gli~~~~~~ce~~~~yp-~t~Dl~H~~~~ 548 (636)
....+|||+|||.|++++.++.+ + .-.|+.+|.++.++..+.++ |+ .-+.-.+.....+| .+||+|.+.++
T Consensus 121 ~~g~rVLDIGcG~G~~ta~~lA~~~--ga~V~gIDis~~~l~~Ar~~~~~~gl-~~v~~v~gDa~~l~d~~FDvV~~~a~ 197 (298)
T 3fpf_A 121 RRGERAVFIGGGPLPLTGILLSHVY--GMRVNVVEIEPDIAELSRKVIEGLGV-DGVNVITGDETVIDGLEFDVLMVAAL 197 (298)
T ss_dssp CTTCEEEEECCCSSCHHHHHHHHTT--CCEEEEEESSHHHHHHHHHHHHHHTC-CSEEEEESCGGGGGGCCCSEEEECTT
T ss_pred CCcCEEEEECCCccHHHHHHHHHcc--CCEEEEEECCHHHHHHHHHHHHhcCC-CCeEEEECchhhCCCCCcCEEEECCC
Confidence 34789999999999987665322 1 13566667777888888776 66 32322333334455 89999987443
Q ss_pred cccCCCCcCHHHHHHHHhhcccCCcEEEEEeCHHH---H-HHH-HHHHhcCCCceEEeccCCCCCCcceEEEEEe
Q 006662 549 FSLYKDRCEMEDVLLEMDRILRPEGSVIIRDDVDI---L-VKI-KSITDGMEWEGRIADHENGPRQREKILFANK 618 (636)
Q Consensus 549 fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~~~~---~-~~~-~~~~~~~~W~~~~~~~e~~~~~~~~~l~~~K 618 (636)
.-+.+.++-|+-|+|||||.+++++.... + ..+ ....+ .|+....-+-.+. ....|.+++|
T Consensus 198 ------~~d~~~~l~el~r~LkPGG~Lvv~~~~~~r~~l~~~v~~~~~~--gf~~~~~~~p~~~-v~N~vv~a~k 263 (298)
T 3fpf_A 198 ------AEPKRRVFRNIHRYVDTETRIIYRTYTGMRAILYAPVSDDDIT--GFRRAGVVLPSGK-VNNTSVLVFK 263 (298)
T ss_dssp ------CSCHHHHHHHHHHHCCTTCEEEEEECCGGGGGSSCCCCTGGGT--TEEEEEEECCCTT-CCCEEEEEEE
T ss_pred ------ccCHHHHHHHHHHHcCCCcEEEEEcCcchhhhccccCChhhhh--hhhheeEECCCCC-cCcEEEEEEc
Confidence 24668999999999999999999974211 0 001 11222 5666654444333 3467888888
No 330
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=98.43 E-value=1e-06 Score=93.03 Aligned_cols=90 Identities=7% Similarity=0.019 Sum_probs=71.6
Q ss_pred cEEEEeCCCCcHHHHHHhhcCCEEEEcCcCCchHHHHHHHHHc----CC--CeEEEEeccccCCCCCCCeeEEEeccccc
Q 006662 220 RTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALER----GV--PALIGVMASIRLPYPSRAFDMAHCSRCLI 293 (636)
Q Consensus 220 r~VLDIGCGtG~~a~~La~~~v~vv~i~p~Dis~a~l~~A~er----g~--~~~~~~~d~~~Lpf~~~sFDlV~~s~~L~ 293 (636)
.+|||+|||+|.++.. ++....++++ |+++.+++.++++ +. ++.+..+|..... ++||+|++....
T Consensus 197 ~~VLDlg~G~G~~~l~-a~~~~~V~~v---D~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~---~~fD~Vi~dpP~- 268 (336)
T 2yx1_A 197 DVVVDMFAGVGPFSIA-CKNAKKIYAI---DINPHAIELLKKNIKLNKLEHKIIPILSDVREVD---VKGNRVIMNLPK- 268 (336)
T ss_dssp CEEEETTCTTSHHHHH-TTTSSEEEEE---ESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC---CCEEEEEECCTT-
T ss_pred CEEEEccCccCHHHHh-ccCCCEEEEE---ECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc---CCCcEEEECCcH-
Confidence 3899999999999999 8865666677 8898888887654 43 5788888887765 789999985322
Q ss_pred ccccChHHHHHHHHhcccCCcEEEEEeC
Q 006662 294 PWGQYDGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 294 h~~~d~~~~L~el~RvLKPGG~Liis~p 321 (636)
....++.++.++|+|||.+++...
T Consensus 269 ----~~~~~l~~~~~~L~~gG~l~~~~~ 292 (336)
T 2yx1_A 269 ----FAHKFIDKALDIVEEGGVIHYYTI 292 (336)
T ss_dssp ----TGGGGHHHHHHHEEEEEEEEEEEE
T ss_pred ----hHHHHHHHHHHHcCCCCEEEEEEe
Confidence 224789999999999999999754
No 331
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=98.42 E-value=2.5e-07 Score=93.72 Aligned_cols=123 Identities=7% Similarity=-0.011 Sum_probs=82.8
Q ss_pred CCcceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhhc-----c---------------------------
Q 006662 475 GRYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERG-----L--------------------------- 522 (636)
Q Consensus 475 ~~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRg-----l--------------------------- 522 (636)
....+|||+|||.|.+...++..+. -+|+.+|.++.++..+.++- -
T Consensus 54 ~~g~~vLDiGCG~G~~~~~~~~~~~--~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~ 131 (263)
T 2a14_A 54 LQGDTLIDIGSGPTIYQVLAACDSF--QDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKL 131 (263)
T ss_dssp CCEEEEEESSCTTCCGGGTTGGGTE--EEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHH
T ss_pred CCCceEEEeCCCccHHHHHHHHhhh--cceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHH
Confidence 3467899999999999888887765 47888898888888776531 0
Q ss_pred ---cc-hhh-cccc--ccCCC-CCccceeeeccccccC-CCCcCHHHHHHHHhhcccCCcEEEEEeCHH-----------
Q 006662 523 ---IG-TYQ-NWCE--AMSTY-PRTYDLIHADSIFSLY-KDRCEMEDVLLEMDRILRPEGSVIIRDDVD----------- 582 (636)
Q Consensus 523 ---i~-~~~-~~ce--~~~~y-p~t~Dl~H~~~~fs~~-~~~c~~~~~l~e~dRiLrPgG~~i~~d~~~----------- 582 (636)
|. +++ |..+ .+... ..+||+|-+..++... .+.-++..+|-+|-|+|||||++|+++...
T Consensus 132 ~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~~~~~~~~g~~~~ 211 (263)
T 2a14_A 132 RAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTLRLPSYMVGKREF 211 (263)
T ss_dssp HHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEE
T ss_pred HhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEeecCccceeCCeEe
Confidence 00 111 2222 11112 2689999998777642 333456789999999999999999985211
Q ss_pred -----HHHHHHHHHhcCCCceE
Q 006662 583 -----ILVKIKSITDGMEWEGR 599 (636)
Q Consensus 583 -----~~~~~~~~~~~~~W~~~ 599 (636)
..+.+.+++..-..++.
T Consensus 212 ~~~~~~~~~l~~~l~~aGF~i~ 233 (263)
T 2a14_A 212 SCVALEKGEVEQAVLDAGFDIE 233 (263)
T ss_dssp ECCCCCHHHHHHHHHHTTEEEE
T ss_pred eccccCHHHHHHHHHHCCCEEE
Confidence 23466676666555544
No 332
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=98.42 E-value=6.5e-07 Score=96.02 Aligned_cols=100 Identities=15% Similarity=0.084 Sum_probs=73.8
Q ss_pred CcEEEEeCCCCcHHHHHHhhcCCEEEEcCcCCchHHHHHHHHHc----CC-CeEEEEeccccCCC----CCCCeeEEEec
Q 006662 219 IRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALER----GV-PALIGVMASIRLPY----PSRAFDMAHCS 289 (636)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~~v~vv~i~p~Dis~a~l~~A~er----g~-~~~~~~~d~~~Lpf----~~~sFDlV~~s 289 (636)
..+|||+|||+|.++..+++....++++ |+++.+++.|+++ +. ++.+..+|...... ..++||+|++.
T Consensus 210 ~~~VLDlg~G~G~~~~~la~~~~~v~~v---D~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~d 286 (382)
T 1wxx_A 210 GERALDVFSYAGGFALHLALGFREVVAV---DSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVLD 286 (382)
T ss_dssp EEEEEEETCTTTHHHHHHHHHEEEEEEE---ESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCeEEEeeeccCHHHHHHHHhCCEEEEE---ECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEEC
Confidence 3489999999999999999874445555 8899998888654 33 37888888755421 25789999985
Q ss_pred ccccccc--------cChHHHHHHHHhcccCCcEEEEEeC
Q 006662 290 RCLIPWG--------QYDGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 290 ~~L~h~~--------~d~~~~L~el~RvLKPGG~Liis~p 321 (636)
.-..... .....++.++.++|+|||+++++..
T Consensus 287 pP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 326 (382)
T 1wxx_A 287 PPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASC 326 (382)
T ss_dssp CCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 4321111 2235788999999999999999975
No 333
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=98.41 E-value=2.4e-07 Score=89.09 Aligned_cols=141 Identities=10% Similarity=0.055 Sum_probs=79.3
Q ss_pred CcceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhh----cc-cchh-hccccccCC---CCCccceeeec
Q 006662 476 RYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GL-IGTY-QNWCEAMST---YPRTYDLIHAD 546 (636)
Q Consensus 476 ~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl-i~~~-~~~ce~~~~---yp~t~Dl~H~~ 546 (636)
...+|||+|||.|.++.+|++..- ..+|+.+|.++.++..+.++ |+ +-++ .|+.+.+.. .+.+||+|.++
T Consensus 30 ~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~n 108 (215)
T 4dzr_A 30 SGTRVIDVGTGSGCIAVSIALACP-GVSVTAVDLSMDALAVARRNAERFGAVVDWAAADGIEWLIERAERGRPWHAIVSN 108 (215)
T ss_dssp TTEEEEEEESSBCHHHHHHHHHCT-TEEEEEEECC-------------------CCHHHHHHHHHHHHHTTCCBSEEEEC
T ss_pred CCCEEEEecCCHhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHHhCCceEEEEcchHhhhhhhhhccCcccEEEEC
Confidence 367999999999999999987610 13556666665666666554 22 2222 244442222 23799999986
Q ss_pred cccccCC-------------CCcC----------HHHHHHHHhhcccCCcE-EEEEeCHHHHHHHHHHHh--cCCCceEE
Q 006662 547 SIFSLYK-------------DRCE----------MEDVLLEMDRILRPEGS-VIIRDDVDILVKIKSITD--GMEWEGRI 600 (636)
Q Consensus 547 ~~fs~~~-------------~~c~----------~~~~l~e~dRiLrPgG~-~i~~d~~~~~~~~~~~~~--~~~W~~~~ 600 (636)
--|.... .... +..++-++.|+|||||+ +++.-.......+.+++. ...|....
T Consensus 109 pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~l~~~~~gf~~~~ 188 (215)
T 4dzr_A 109 PPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVGHNQADEVARLFAPWRERGFRVR 188 (215)
T ss_dssp CCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECTTSCHHHHHHHTGGGGGGTEECC
T ss_pred CCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEECCccHHHHHHHHHHhhcCCceEE
Confidence 5543211 1111 16888999999999999 777655555667777777 55554321
Q ss_pred eccCCCCCCcceEEEEEec
Q 006662 601 ADHENGPRQREKILFANKK 619 (636)
Q Consensus 601 ~~~e~~~~~~~~~l~~~K~ 619 (636)
.-. ...+.+++++++|.
T Consensus 189 ~~~--~~~~~~r~~~~~~~ 205 (215)
T 4dzr_A 189 KVK--DLRGIDRVIAVTRE 205 (215)
T ss_dssp EEE--CTTSCEEEEEEEEC
T ss_pred EEE--ecCCCEEEEEEEEc
Confidence 111 12245889998874
No 334
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=98.40 E-value=3.2e-07 Score=92.76 Aligned_cols=126 Identities=15% Similarity=0.105 Sum_probs=89.4
Q ss_pred cceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhh----cc-cchhh-ccccccCCCC-Cccceeeecccc
Q 006662 477 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GL-IGTYQ-NWCEAMSTYP-RTYDLIHADSIF 549 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl-i~~~~-~~ce~~~~yp-~t~Dl~H~~~~f 549 (636)
..+|||+|||.|.++.++++.+. +|+.+|.++..+..+.++ |+ +.+++ |+.+ .+| ..||+|.++.++
T Consensus 121 ~~~VLDiGcG~G~l~~~la~~g~---~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~---~~~~~~fD~Vv~n~~~ 194 (254)
T 2nxc_A 121 GDKVLDLGTGSGVLAIAAEKLGG---KALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEA---ALPFGPFDLLVANLYA 194 (254)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTC---EEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHH---HGGGCCEEEEEEECCH
T ss_pred CCEEEEecCCCcHHHHHHHHhCC---eEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhh---cCcCCCCCEEEECCcH
Confidence 46899999999999999988765 777778877888888775 43 22222 2222 243 789999986544
Q ss_pred ccCCCCcCHHHHHHHHhhcccCCcEEEEEeC-HHHHHHHHHHHhcCCCceEEeccCCCCCCcceEEEEEe
Q 006662 550 SLYKDRCEMEDVLLEMDRILRPEGSVIIRDD-VDILVKIKSITDGMEWEGRIADHENGPRQREKILFANK 618 (636)
Q Consensus 550 s~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~-~~~~~~~~~~~~~~~W~~~~~~~e~~~~~~~~~l~~~K 618 (636)
. .+..++-++-|+|||||++++++. ......+.++++...++....... +.-..++++|
T Consensus 195 ~------~~~~~l~~~~~~LkpgG~lils~~~~~~~~~v~~~l~~~Gf~~~~~~~~----~~W~~l~~~k 254 (254)
T 2nxc_A 195 E------LHAALAPRYREALVPGGRALLTGILKDRAPLVREAMAGAGFRPLEEAAE----GEWVLLAYGR 254 (254)
T ss_dssp H------HHHHHHHHHHHHEEEEEEEEEEEEEGGGHHHHHHHHHHTTCEEEEEEEE----TTEEEEEEEC
T ss_pred H------HHHHHHHHHHHHcCCCCEEEEEeeccCCHHHHHHHHHHCCCEEEEEecc----CCeEEEEEEC
Confidence 2 257899999999999999999853 345677888888877877644333 1234555554
No 335
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.40 E-value=7.1e-07 Score=103.26 Aligned_cols=100 Identities=13% Similarity=0.112 Sum_probs=76.0
Q ss_pred cEEEEeCCCCcHHHHHHhhcCCE-EEEcCcCCchHHHHHHHHHc----CC---CeEEEEecccc-CCCCCCCeeEEEecc
Q 006662 220 RTAIDTGCGVASWGAYLMSRNIL-AVSFAPRDTHEAQVQFALER----GV---PALIGVMASIR-LPYPSRAFDMAHCSR 290 (636)
Q Consensus 220 r~VLDIGCGtG~~a~~La~~~v~-vv~i~p~Dis~a~l~~A~er----g~---~~~~~~~d~~~-Lpf~~~sFDlV~~s~ 290 (636)
.+|||+|||+|.++..++..+.. ++++ |+++.+++.|+++ +. .+.+..+|... ++...++||+|++..
T Consensus 541 ~~VLDlg~GtG~~sl~aa~~ga~~V~aV---D~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~DP 617 (703)
T 3v97_A 541 KDFLNLFSYTGSATVHAGLGGARSTTTV---DMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDP 617 (703)
T ss_dssp CEEEEESCTTCHHHHHHHHTTCSEEEEE---ESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEECC
T ss_pred CcEEEeeechhHHHHHHHHCCCCEEEEE---eCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccEEEECC
Confidence 38999999999999999988653 6666 8899999888754 43 47888888765 444567899999854
Q ss_pred ccc----------ccccChHHHHHHHHhcccCCcEEEEEeCC
Q 006662 291 CLI----------PWGQYDGLYLIEVDRVLRPGGYWILSGPP 322 (636)
Q Consensus 291 ~L~----------h~~~d~~~~L~el~RvLKPGG~Liis~p~ 322 (636)
-.. ....+...++.++.++|+|||+|+++...
T Consensus 618 P~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 618 PTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNK 659 (703)
T ss_dssp CSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred ccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 221 11223357899999999999999999763
No 336
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=98.40 E-value=1e-06 Score=96.97 Aligned_cols=109 Identities=19% Similarity=0.134 Sum_probs=76.7
Q ss_pred HHHhhccCCCCCcEEEEeCCCCcHHHHHHhhc---CCEEEEcCcCCchHHHHHHHHHc----CC-CeEEEEeccccCC-C
Q 006662 208 IGKLINLKDGSIRTAIDTGCGVASWGAYLMSR---NILAVSFAPRDTHEAQVQFALER----GV-PALIGVMASIRLP-Y 278 (636)
Q Consensus 208 L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~---~v~vv~i~p~Dis~a~l~~A~er----g~-~~~~~~~d~~~Lp-f 278 (636)
+..++...++. +|||+|||+|..+..+++. ...++.+ |+++.+++.++++ +. ++.+...|...++ .
T Consensus 97 ~~~~L~~~~g~--~VLDlcaGpGgkt~~lA~~~~~~g~V~Av---Dis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~~~ 171 (456)
T 3m4x_A 97 VGTAAAAKPGE--KVLDLCAAPGGKSTQLAAQMKGKGLLVTN---EIFPKRAKILSENIERWGVSNAIVTNHAPAELVPH 171 (456)
T ss_dssp HHHHHCCCTTC--EEEESSCTTCHHHHHHHHHHTTCSEEEEE---CSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHHH
T ss_pred HHHHcCCCCCC--EEEEECCCcCHHHHHHHHHcCCCCEEEEE---eCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhhhh
Confidence 44455555555 9999999999999999876 2456666 8898888877644 44 4677777776654 3
Q ss_pred CCCCeeEEEeccc---ccccccCh------------------HHHHHHHHhcccCCcEEEEEeC
Q 006662 279 PSRAFDMAHCSRC---LIPWGQYD------------------GLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 279 ~~~sFDlV~~s~~---L~h~~~d~------------------~~~L~el~RvLKPGG~Liis~p 321 (636)
.+++||+|++..- .-.+..++ ..+|.++.++|||||+|++++-
T Consensus 172 ~~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTC 235 (456)
T 3m4x_A 172 FSGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTC 235 (456)
T ss_dssp HTTCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEES
T ss_pred ccccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 4578999997321 00111111 2679999999999999999875
No 337
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.40 E-value=2.7e-07 Score=94.14 Aligned_cols=110 Identities=16% Similarity=0.114 Sum_probs=79.4
Q ss_pred HHHHHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhc--CCEEEEcCcCCchHHHHHHHHHc----CCCeEEEEecccc
Q 006662 202 DAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR--NILAVSFAPRDTHEAQVQFALER----GVPALIGVMASIR 275 (636)
Q Consensus 202 ~~~id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~--~v~vv~i~p~Dis~a~l~~A~er----g~~~~~~~~d~~~ 275 (636)
+.+...+.+.+ +.+.+|||||||+|-++..++.. ...++.+ |+++.++++++++ +++..+.+.|...
T Consensus 120 D~fY~~i~~~i----~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~---DId~~~le~a~~~l~~~g~~~~~~v~D~~~ 192 (281)
T 3lcv_B 120 DEFYRELFRHL----PRPNTLRDLACGLNPLAAPWMGLPAETVYIAS---DIDARLVGFVDEALTRLNVPHRTNVADLLE 192 (281)
T ss_dssp HHHHHHHGGGS----CCCSEEEETTCTTGGGCCTTTTCCTTCEEEEE---ESBHHHHHHHHHHHHHTTCCEEEEECCTTT
T ss_pred HHHHHHHHhcc----CCCceeeeeccCccHHHHHHHhhCCCCEEEEE---eCCHHHHHHHHHHHHhcCCCceEEEeeecc
Confidence 34444444443 22459999999999999998776 4455566 8899999888654 6777888777654
Q ss_pred CCCCCCCeeEEEecccccccccChHHHHHHHHhcccCCcEEEEE
Q 006662 276 LPYPSRAFDMAHCSRCLIPWGQYDGLYLIEVDRVLRPGGYWILS 319 (636)
Q Consensus 276 Lpf~~~sFDlV~~s~~L~h~~~d~~~~L~el~RvLKPGG~Liis 319 (636)
-+ +.+.||+|+++-++++........+.++...|+|+|.++-.
T Consensus 193 ~~-p~~~~DvaL~lkti~~Le~q~kg~g~~ll~aL~~~~vvVSf 235 (281)
T 3lcv_B 193 DR-LDEPADVTLLLKTLPCLETQQRGSGWEVIDIVNSPNIVVTF 235 (281)
T ss_dssp SC-CCSCCSEEEETTCHHHHHHHSTTHHHHHHHHSSCSEEEEEE
T ss_pred cC-CCCCcchHHHHHHHHHhhhhhhHHHHHHHHHhCCCCEEEec
Confidence 44 56789999999988665433333333999999999988654
No 338
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.39 E-value=1.7e-08 Score=101.49 Aligned_cols=110 Identities=15% Similarity=0.131 Sum_probs=77.1
Q ss_pred HHHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhcCCEEEEcCcCCchHHHHHHHHHcC---CCeEEEEeccccCCCCC
Q 006662 204 YIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALERG---VPALIGVMASIRLPYPS 280 (636)
Q Consensus 204 ~id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~~v~vv~i~p~Dis~a~l~~A~erg---~~~~~~~~d~~~Lpf~~ 280 (636)
.++.+.+.+...++. +|||||||+|.++..+++++..++++ |+++.+++.++++. .++.+..+|...++++.
T Consensus 17 ~~~~i~~~~~~~~~~--~VLDiG~G~G~~~~~l~~~~~~v~~i---d~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~~~~ 91 (245)
T 1yub_A 17 VLNQIIKQLNLKETD--TVYEIGTGKGHLTTKLAKISKQVTSI---ELDSHLFNLSSEKLKLNTRVTLIHQDILQFQFPN 91 (245)
T ss_dssp THHHHHHHCCCCSSE--EEEECSCCCSSCSHHHHHHSSEEEES---SSSCSSSSSSSCTTTTCSEEEECCSCCTTTTCCC
T ss_pred HHHHHHHhcCCCCCC--EEEEEeCCCCHHHHHHHHhCCeEEEE---ECCHHHHHHHHHHhccCCceEEEECChhhcCccc
Confidence 445666666555444 89999999999999999988777777 88888877776542 34778888888888774
Q ss_pred -CCeeEEEecccccccc-----------cChHHHH----HHHHhcccCCcEEEEEe
Q 006662 281 -RAFDMAHCSRCLIPWG-----------QYDGLYL----IEVDRVLRPGGYWILSG 320 (636)
Q Consensus 281 -~sFDlV~~s~~L~h~~-----------~d~~~~L----~el~RvLKPGG~Liis~ 320 (636)
++| .|+++... +.. .....++ +.+.|+|+|||.+++..
T Consensus 92 ~~~f-~vv~n~Py-~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~~ 145 (245)
T 1yub_A 92 KQRY-KIVGNIPY-HLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLLL 145 (245)
T ss_dssp SSEE-EEEEECCS-SSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHHT
T ss_pred CCCc-EEEEeCCc-cccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhhh
Confidence 689 66665422 111 1222333 66889999998877664
No 339
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.39 E-value=3.6e-07 Score=89.05 Aligned_cols=99 Identities=20% Similarity=0.315 Sum_probs=71.7
Q ss_pred cceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhhc-----ccchhh-ccccccCCCC-Cccceeeecccc
Q 006662 477 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERG-----LIGTYQ-NWCEAMSTYP-RTYDLIHADSIF 549 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRg-----li~~~~-~~ce~~~~yp-~t~Dl~H~~~~f 549 (636)
..+|||+|||.|.++..|.+..- +|+.+|.++.++..+.++- -+..++ |..+ + ++| .+||+|.++.++
T Consensus 39 ~~~vLDlG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~-~-~~~~~~~D~v~~~~~~ 113 (227)
T 1ve3_A 39 RGKVLDLACGVGGFSFLLEDYGF---EVVGVDISEDMIRKAREYAKSRESNVEFIVGDARK-L-SFEDKTFDYVIFIDSI 113 (227)
T ss_dssp CCEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTS-C-CSCTTCEEEEEEESCG
T ss_pred CCeEEEEeccCCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHhcCCCceEEECchhc-C-CCCCCcEEEEEEcCch
Confidence 56899999999999999988754 6777777777888877662 122222 2221 2 244 799999998774
Q ss_pred ccCCCCcCHHHHHHHHhhcccCCcEEEEEeCH
Q 006662 550 SLYKDRCEMEDVLLEMDRILRPEGSVIIRDDV 581 (636)
Q Consensus 550 s~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~~ 581 (636)
..+. .-+...+|.++-|+|||||.+++.+..
T Consensus 114 ~~~~-~~~~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 114 VHFE-PLELNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp GGCC-HHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred HhCC-HHHHHHHHHHHHHHcCCCcEEEEEecC
Confidence 4332 234578999999999999999998653
No 340
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=98.39 E-value=2e-07 Score=94.55 Aligned_cols=121 Identities=12% Similarity=0.035 Sum_probs=84.9
Q ss_pred cceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhhc-c-------------------cchhhccccccCCC
Q 006662 477 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERG-L-------------------IGTYQNWCEAMSTY 536 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRg-l-------------------i~~~~~~ce~~~~y 536 (636)
..+|||+|||.|.++.+|++.+. +|+.+|.++.++..+.++- + -.-+.-.|..+...
T Consensus 69 ~~~vLD~GCG~G~~~~~La~~G~---~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l 145 (252)
T 2gb4_A 69 GLRVFFPLCGKAIEMKWFADRGH---TVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDL 145 (252)
T ss_dssp SCEEEETTCTTCTHHHHHHHTTC---EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTG
T ss_pred CCeEEEeCCCCcHHHHHHHHCCC---eEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccC
Confidence 46899999999999999999875 6888899989999987653 1 01111223333333
Q ss_pred C----CccceeeeccccccCCCCcCHHHHHHHHhhcccCCcEEEE-EeC--------H---HHHHHHHHHHhcCCCceEE
Q 006662 537 P----RTYDLIHADSIFSLYKDRCEMEDVLLEMDRILRPEGSVII-RDD--------V---DILVKIKSITDGMEWEGRI 600 (636)
Q Consensus 537 p----~t~Dl~H~~~~fs~~~~~c~~~~~l~e~dRiLrPgG~~i~-~d~--------~---~~~~~~~~~~~~~~W~~~~ 600 (636)
| .+||+|-+.++|.... ..+.+.++-||-|+|||||.+++ +-. . -..+.+.+++.. .|++..
T Consensus 146 ~~~~~~~FD~V~~~~~l~~l~-~~~~~~~l~~~~~~LkpGG~l~l~~~~~~~~~~~g~~~~~~~~el~~~l~~-~f~v~~ 223 (252)
T 2gb4_A 146 PRANIGKFDRIWDRGALVAIN-PGDHDRYADIILSLLRKEFQYLVAVLSYDPTKHAGPPFYVPSAELKRLFGT-KCSMQC 223 (252)
T ss_dssp GGGCCCCEEEEEESSSTTTSC-GGGHHHHHHHHHHTEEEEEEEEEEEEECCTTSCCCSSCCCCHHHHHHHHTT-TEEEEE
T ss_pred CcccCCCEEEEEEhhhhhhCC-HHHHHHHHHHHHHHcCCCeEEEEEEEecCCccCCCCCCCCCHHHHHHHhhC-CeEEEE
Confidence 2 7899999888776543 34567899999999999999964 311 0 123567777766 477764
Q ss_pred ec
Q 006662 601 AD 602 (636)
Q Consensus 601 ~~ 602 (636)
..
T Consensus 224 ~~ 225 (252)
T 2gb4_A 224 LE 225 (252)
T ss_dssp EE
T ss_pred Ee
Confidence 43
No 341
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=98.39 E-value=1.2e-07 Score=94.22 Aligned_cols=99 Identities=10% Similarity=-0.032 Sum_probs=71.3
Q ss_pred cceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhhcccchhhccccccCC------CC--Cccceeeeccc
Q 006662 477 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERGLIGTYQNWCEAMST------YP--RTYDLIHADSI 548 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRgli~~~~~~ce~~~~------yp--~t~Dl~H~~~~ 548 (636)
..+|||+|||.|.++..|++..- +|+.+|.++.++..+.++--..-+.-.+..+.. ++ ..||+|.+..+
T Consensus 57 ~~~vLD~GcG~G~~~~~la~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~~~~ 133 (245)
T 3ggd_A 57 ELPLIDFACGNGTQTKFLSQFFP---RVIGLDVSKSALEIAAKENTAANISYRLLDGLVPEQAAQIHSEIGDANIYMRTG 133 (245)
T ss_dssp TSCEEEETCTTSHHHHHHHHHSS---CEEEEESCHHHHHHHHHHSCCTTEEEEECCTTCHHHHHHHHHHHCSCEEEEESS
T ss_pred CCeEEEEcCCCCHHHHHHHHhCC---CEEEEECCHHHHHHHHHhCcccCceEEECcccccccccccccccCccEEEEcch
Confidence 56799999999999999987643 667778887888888877421111111122222 22 24999999888
Q ss_pred cccCCCCcCHHHHHHHHhhcccCCcEEEEEe
Q 006662 549 FSLYKDRCEMEDVLLEMDRILRPEGSVIIRD 579 (636)
Q Consensus 549 fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d 579 (636)
+.... .-+...+|-|+-|+|||||+++|.+
T Consensus 134 ~~~~~-~~~~~~~l~~~~~~LkpgG~l~i~~ 163 (245)
T 3ggd_A 134 FHHIP-VEKRELLGQSLRILLGKQGAMYLIE 163 (245)
T ss_dssp STTSC-GGGHHHHHHHHHHHHTTTCEEEEEE
T ss_pred hhcCC-HHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 77553 2356899999999999999988875
No 342
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=98.39 E-value=1.5e-07 Score=96.74 Aligned_cols=95 Identities=14% Similarity=0.221 Sum_probs=69.4
Q ss_pred eEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhhcc---------cchhh-ccccccCCCCCccceeeec-c
Q 006662 479 NLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERGL---------IGTYQ-NWCEAMSTYPRTYDLIHAD-S 547 (636)
Q Consensus 479 ~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRgl---------i~~~~-~~ce~~~~yp~t~Dl~H~~-~ 547 (636)
+|||+|||.|.++.+|++.+. +|+.+|.++.++..+.++-- +-++. |.. .+ +++.+||+|.+. .
T Consensus 85 ~vLDlGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~-~~-~~~~~fD~v~~~~~ 159 (299)
T 3g2m_A 85 PVLELAAGMGRLTFPFLDLGW---EVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMS-AF-ALDKRFGTVVISSG 159 (299)
T ss_dssp CEEEETCTTTTTHHHHHTTTC---CEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTT-BC-CCSCCEEEEEECHH
T ss_pred cEEEEeccCCHHHHHHHHcCC---eEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchh-cC-CcCCCcCEEEECCc
Confidence 899999999999999999863 56777877788888887622 22222 222 22 236999998863 4
Q ss_pred ccccCCCCcCHHHHHHHHhhcccCCcEEEEEe
Q 006662 548 IFSLYKDRCEMEDVLLEMDRILRPEGSVIIRD 579 (636)
Q Consensus 548 ~fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d 579 (636)
++.. .+.-++..+|-++-|+|||||.++|..
T Consensus 160 ~~~~-~~~~~~~~~l~~~~~~L~pgG~l~~~~ 190 (299)
T 3g2m_A 160 SINE-LDEADRRGLYASVREHLEPGGKFLLSL 190 (299)
T ss_dssp HHTT-SCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cccc-CCHHHHHHHHHHHHHHcCCCcEEEEEe
Confidence 4442 233346899999999999999999974
No 343
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.38 E-value=4.5e-07 Score=97.44 Aligned_cols=110 Identities=17% Similarity=0.220 Sum_probs=76.4
Q ss_pred HHHHHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhc---CCEEEEcCcCCchHHHHHHHHHcCCCeEEEEeccccCCC
Q 006662 202 DAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR---NILAVSFAPRDTHEAQVQFALERGVPALIGVMASIRLPY 278 (636)
Q Consensus 202 ~~~id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~---~v~vv~i~p~Dis~a~l~~A~erg~~~~~~~~d~~~Lpf 278 (636)
...++.+.+++....+ .+|||+|||+|.++..++++ +..++++ |+++.+++.| ..+.+...|....+
T Consensus 25 ~~l~~~~~~~~~~~~~--~~vLD~gcGtG~~~~~~~~~~~~~~~i~gv---Di~~~~~~~a----~~~~~~~~D~~~~~- 94 (421)
T 2ih2_A 25 PEVVDFMVSLAEAPRG--GRVLEPACAHGPFLRAFREAHGTAYRFVGV---EIDPKALDLP----PWAEGILADFLLWE- 94 (421)
T ss_dssp HHHHHHHHHHCCCCTT--CEEEEETCTTCHHHHHHHHHHCSCSEEEEE---ESCTTTCCCC----TTEEEEESCGGGCC-
T ss_pred HHHHHHHHHhhccCCC--CEEEECCCCChHHHHHHHHHhCCCCeEEEE---ECCHHHHHhC----CCCcEEeCChhhcC-
Confidence 4566677777654333 38999999999999999974 3444444 5565555555 35678888876654
Q ss_pred CCCCeeEEEeccccccccc---------Ch-------------------HHHHHHHHhcccCCcEEEEEeC
Q 006662 279 PSRAFDMAHCSRCLIPWGQ---------YD-------------------GLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 279 ~~~sFDlV~~s~~L~h~~~---------d~-------------------~~~L~el~RvLKPGG~Liis~p 321 (636)
+.+.||+|+++.-+..... +. ..++..+.++|+|||.+++..|
T Consensus 95 ~~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p 165 (421)
T 2ih2_A 95 PGEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVP 165 (421)
T ss_dssp CSSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ccCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEC
Confidence 3468999999743322111 11 2568899999999999999987
No 344
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=98.38 E-value=2.8e-07 Score=88.83 Aligned_cols=97 Identities=14% Similarity=0.197 Sum_probs=68.3
Q ss_pred cceEeeecccchhhh-hhhcCCCeEEEEecCCCCCccchHHHHhh----cc-cchhh-ccccccCCCC-Cccceeeeccc
Q 006662 477 YRNLLDMNAYLGGFA-AALVDDPLWVMNTVPVEAKINTLGVIYER----GL-IGTYQ-NWCEAMSTYP-RTYDLIHADSI 548 (636)
Q Consensus 477 ~r~vlD~~~g~ggfa-a~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl-i~~~~-~~ce~~~~yp-~t~Dl~H~~~~ 548 (636)
..+|||+|||.|.+. ..+...+. +|+.+|.++.++..+.++ |. +-..+ |. +.+ ++| .+||+|.+.++
T Consensus 24 ~~~vLDiGcG~G~~~~~~~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~-~~~-~~~~~~fD~v~~~~~ 98 (209)
T 2p8j_A 24 DKTVLDCGAGGDLPPLSIFVEDGY---KTYGIEISDLQLKKAENFSRENNFKLNISKGDI-RKL-PFKDESMSFVYSYGT 98 (209)
T ss_dssp CSEEEEESCCSSSCTHHHHHHTTC---EEEEEECCHHHHHHHHHHHHHHTCCCCEEECCT-TSC-CSCTTCEEEEEECSC
T ss_pred CCEEEEECCCCCHHHHHHHHhCCC---EEEEEECCHHHHHHHHHHHHhcCCceEEEECch-hhC-CCCCCceeEEEEcCh
Confidence 568999999999984 45555543 667778877888887765 22 22222 22 222 244 89999999877
Q ss_pred cccCCCCcCHHHHHHHHhhcccCCcEEEEEe
Q 006662 549 FSLYKDRCEMEDVLLEMDRILRPEGSVIIRD 579 (636)
Q Consensus 549 fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d 579 (636)
+.... .-+...+|-++-|+|||||.+++.+
T Consensus 99 l~~~~-~~~~~~~l~~~~~~LkpgG~l~~~~ 128 (209)
T 2p8j_A 99 IFHMR-KNDVKEAIDEIKRVLKPGGLACINF 128 (209)
T ss_dssp GGGSC-HHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHhCC-HHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 65432 2456799999999999999999975
No 345
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=98.36 E-value=4.6e-07 Score=97.06 Aligned_cols=100 Identities=18% Similarity=0.180 Sum_probs=71.6
Q ss_pred CCcceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhh----cc---cchhhccccccCCCCCccceeeecc
Q 006662 475 GRYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GL---IGTYQNWCEAMSTYPRTYDLIHADS 547 (636)
Q Consensus 475 ~~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl---i~~~~~~ce~~~~yp~t~Dl~H~~~ 547 (636)
....+|||+|||+|.++..|++.+. -.|+.+|.+ +++..+.++ |+ +-+++.=.+.+ .+|..||+|.++.
T Consensus 62 ~~~~~VLDlGcGtG~ls~~la~~g~--~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~D~Iv~~~ 137 (376)
T 3r0q_C 62 FEGKTVLDVGTGSGILAIWSAQAGA--RKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDI-SLPEKVDVIISEW 137 (376)
T ss_dssp TTTCEEEEESCTTTHHHHHHHHTTC--SEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGC-CCSSCEEEEEECC
T ss_pred CCCCEEEEeccCcCHHHHHHHhcCC--CEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhc-CcCCcceEEEEcC
Confidence 3467899999999999999988754 256677777 777776554 43 23333111222 2458999999966
Q ss_pred ccccCCCCcCHHHHHHHHhhcccCCcEEEEE
Q 006662 548 IFSLYKDRCEMEDVLLEMDRILRPEGSVIIR 578 (636)
Q Consensus 548 ~fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~ 578 (636)
+.......-.++.++-+++|+|+|||.+|+.
T Consensus 138 ~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~ 168 (376)
T 3r0q_C 138 MGYFLLRESMFDSVISARDRWLKPTGVMYPS 168 (376)
T ss_dssp CBTTBTTTCTHHHHHHHHHHHEEEEEEEESS
T ss_pred hhhcccchHHHHHHHHHHHhhCCCCeEEEEe
Confidence 5554444456788999999999999999885
No 346
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.36 E-value=1.1e-06 Score=91.37 Aligned_cols=86 Identities=9% Similarity=0.061 Sum_probs=68.7
Q ss_pred HHHHHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhcCCEEEEcCcCCchHHHHHHHHHc---CCCeEEEEeccccCCC
Q 006662 202 DAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALER---GVPALIGVMASIRLPY 278 (636)
Q Consensus 202 ~~~id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~~v~vv~i~p~Dis~a~l~~A~er---g~~~~~~~~d~~~Lpf 278 (636)
...++.+.+.+...++. +|||||||+|.++..|++++..++++ |+++.+++.++++ ..++.+..+|...+++
T Consensus 36 ~~i~~~Iv~~l~~~~~~--~VLEIG~G~G~lT~~La~~~~~V~aV---Eid~~li~~a~~~~~~~~~v~vi~gD~l~~~~ 110 (295)
T 3gru_A 36 KNFVNKAVESANLTKDD--VVLEIGLGKGILTEELAKNAKKVYVI---EIDKSLEPYANKLKELYNNIEIIWGDALKVDL 110 (295)
T ss_dssp HHHHHHHHHHTTCCTTC--EEEEECCTTSHHHHHHHHHSSEEEEE---ESCGGGHHHHHHHHHHCSSEEEEESCTTTSCG
T ss_pred HHHHHHHHHhcCCCCcC--EEEEECCCchHHHHHHHhcCCEEEEE---ECCHHHHHHHHHHhccCCCeEEEECchhhCCc
Confidence 34667777777666655 99999999999999999987666666 7777777777654 3578999999999998
Q ss_pred CCCCeeEEEecccc
Q 006662 279 PSRAFDMAHCSRCL 292 (636)
Q Consensus 279 ~~~sFDlV~~s~~L 292 (636)
++.+||+|+++..+
T Consensus 111 ~~~~fD~Iv~NlPy 124 (295)
T 3gru_A 111 NKLDFNKVVANLPY 124 (295)
T ss_dssp GGSCCSEEEEECCG
T ss_pred ccCCccEEEEeCcc
Confidence 88889999988654
No 347
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=98.36 E-value=7.4e-07 Score=87.69 Aligned_cols=97 Identities=21% Similarity=0.158 Sum_probs=60.3
Q ss_pred CcceEeeecccchhhhhhhcCCCeEEEEecCCCCCccch----HHHHhhcccc-hhhccccc--cCCCCCccceeeeccc
Q 006662 476 RYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTL----GVIYERGLIG-TYQNWCEA--MSTYPRTYDLIHADSI 548 (636)
Q Consensus 476 ~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l----~~~~eRgli~-~~~~~ce~--~~~yp~t~Dl~H~~~~ 548 (636)
...+|||+|||+|.++..|++.-= .-.|+.+|.++.++ ..+.++.-+- +..|..+. +..++.+||+|.++.
T Consensus 57 ~g~~VLDlGcGtG~~~~~la~~~~-~~~V~gvD~s~~~l~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~~- 134 (210)
T 1nt2_A 57 GDERVLYLGAASGTTVSHLADIVD-EGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGIVEKVDLIYQDI- 134 (210)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHTT-TSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTTTCCCEEEEEECC-
T ss_pred CCCEEEEECCcCCHHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCchhhcccccceeEEEEec-
Confidence 356899999999999988876410 01455667765543 3333332121 22232221 133458999998862
Q ss_pred cccCCCCcCHHHHHHHHhhcccCCcEEEEE
Q 006662 549 FSLYKDRCEMEDVLLEMDRILRPEGSVIIR 578 (636)
Q Consensus 549 fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~ 578 (636)
. ..-....+|.|+.|+|||||.+++.
T Consensus 135 -~---~~~~~~~~l~~~~r~LkpgG~l~i~ 160 (210)
T 1nt2_A 135 -A---QKNQIEILKANAEFFLKEKGEVVIM 160 (210)
T ss_dssp -C---STTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred -c---ChhHHHHHHHHHHHHhCCCCEEEEE
Confidence 1 1112345689999999999999997
No 348
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=98.34 E-value=6.4e-07 Score=91.23 Aligned_cols=136 Identities=12% Similarity=0.198 Sum_probs=90.3
Q ss_pred cceEeeecccchhhhhhhcCC-CeEEEEecCCCCCccchHHHHhh----cc--cchhh-ccccccCCCCCccceeeeccc
Q 006662 477 YRNLLDMNAYLGGFAAALVDD-PLWVMNTVPVEAKINTLGVIYER----GL--IGTYQ-NWCEAMSTYPRTYDLIHADSI 548 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~~-~v~~mnv~~~~~~~~~l~~~~eR----gl--i~~~~-~~ce~~~~yp~t~Dl~H~~~~ 548 (636)
..+|||+|||.|.++.+|++. +- .+|+.+|.++..+.++.++ |+ +-+++ |+.+.+. +.+||+|-++--
T Consensus 110 ~~~vLDlG~GsG~~~~~la~~~~~--~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~~~--~~~fD~Iv~npP 185 (276)
T 2b3t_A 110 PCRILDLGTGTGAIALALASERPD--CEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSALA--GQQFAMIVSNPP 185 (276)
T ss_dssp CCEEEEETCTTSHHHHHHHHHCTT--SEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGGT--TCCEEEEEECCC
T ss_pred CCEEEEecCCccHHHHHHHHhCCC--CEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhhcc--cCCccEEEECCC
Confidence 458999999999999998743 32 2566778777888887765 43 33333 4433221 478999998733
Q ss_pred cccC------------CCC----------cCHHHHHHHHhhcccCCcEEEEEeCHHHHHHHHHHHhcCCCceEEeccCCC
Q 006662 549 FSLY------------KDR----------CEMEDVLLEMDRILRPEGSVIIRDDVDILVKIKSITDGMEWEGRIADHENG 606 (636)
Q Consensus 549 fs~~------------~~~----------c~~~~~l~e~dRiLrPgG~~i~~d~~~~~~~~~~~~~~~~W~~~~~~~e~~ 606 (636)
+... ... -.+..++-++-|+|+|||++++.........++++++...|+...... .
T Consensus 186 y~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~~~Gf~~v~~~~--d 263 (276)
T 2b3t_A 186 YIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFILAGYHDVETCR--D 263 (276)
T ss_dssp CBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECCSSCHHHHHHHHHHTTCTTCCEEE--C
T ss_pred CCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEECchHHHHHHHHHHHCCCcEEEEEe--c
Confidence 3211 111 134678999999999999999987666667777777776775432111 1
Q ss_pred CCCcceEEEEEe
Q 006662 607 PRQREKILFANK 618 (636)
Q Consensus 607 ~~~~~~~l~~~K 618 (636)
-.+.+++++++|
T Consensus 264 ~~g~~r~~~~~~ 275 (276)
T 2b3t_A 264 YGDNERVTLGRY 275 (276)
T ss_dssp TTSSEEEEEEEC
T ss_pred CCCCCcEEEEEE
Confidence 225678888875
No 349
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=98.34 E-value=4e-07 Score=93.14 Aligned_cols=121 Identities=9% Similarity=-0.013 Sum_probs=82.8
Q ss_pred CCcceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhhcccchhh-cccccc----CCCCCccceeeecccc
Q 006662 475 GRYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERGLIGTYQ-NWCEAM----STYPRTYDLIHADSIF 549 (636)
Q Consensus 475 ~~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRgli~~~~-~~ce~~----~~yp~t~Dl~H~~~~f 549 (636)
....+|||+|||+|.++..|++++. .|+.+|.++.++..+.++---..++ +|.+.- ...+.+||+|-++.++
T Consensus 44 ~~g~~VLDlGcGtG~~a~~La~~g~---~V~gvD~S~~ml~~Ar~~~~~~~v~~~~~~~~~~~~~~~~~~fD~Vv~~~~l 120 (261)
T 3iv6_A 44 VPGSTVAVIGASTRFLIEKALERGA---SVTVFDFSQRMCDDLAEALADRCVTIDLLDITAEIPKELAGHFDFVLNDRLI 120 (261)
T ss_dssp CTTCEEEEECTTCHHHHHHHHHTTC---EEEEEESCHHHHHHHHHHTSSSCCEEEECCTTSCCCGGGTTCCSEEEEESCG
T ss_pred CCcCEEEEEeCcchHHHHHHHhcCC---EEEEEECCHHHHHHHHHHHHhccceeeeeecccccccccCCCccEEEEhhhh
Confidence 3467899999999999999998854 5777888888999998874211122 333211 1224789999998877
Q ss_pred ccCCCCcCHHHHHHHHhhcccCCcEEEEEeCH----HHHHHHHHHHhcCCCceEE
Q 006662 550 SLYKDRCEMEDVLLEMDRILRPEGSVIIRDDV----DILVKIKSITDGMEWEGRI 600 (636)
Q Consensus 550 s~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~~----~~~~~~~~~~~~~~W~~~~ 600 (636)
..+.. -+...+|.+|-|+| |||.++++-.. .-...++.....-.|....
T Consensus 121 ~~~~~-~~~~~~l~~l~~lL-PGG~l~lS~~~g~~~~d~~~l~~~~~~g~~~~~~ 173 (261)
T 3iv6_A 121 NRFTT-EEARRACLGMLSLV-GSGTVRASVKLGFYDIDLKLIEYGEQSGTLAKFF 173 (261)
T ss_dssp GGSCH-HHHHHHHHHHHHHH-TTSEEEEEEEBSCCHHHHHHHHHHHTTTCHHHHE
T ss_pred HhCCH-HHHHHHHHHHHHhC-cCcEEEEEeccCcccccHHHHHHHHhcCCeeeee
Confidence 65432 24668999999999 99999998432 1233444545555554443
No 350
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=98.34 E-value=1.8e-07 Score=97.36 Aligned_cols=103 Identities=13% Similarity=0.132 Sum_probs=70.9
Q ss_pred cceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhhcc-cc----------hh-hccc------cccC-CCC
Q 006662 477 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERGL-IG----------TY-QNWC------EAMS-TYP 537 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRgl-i~----------~~-~~~c------e~~~-~yp 537 (636)
..+|||+|||.|+....++..+. -+|+.+|.++.++..+.+|-- .+ .| ...+ +.+. .+|
T Consensus 49 ~~~VLDlGCG~G~~l~~~~~~~~--~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~ 126 (302)
T 2vdw_A 49 KRKVLAIDFGNGADLEKYFYGEI--ALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFY 126 (302)
T ss_dssp CCEEEETTCTTTTTHHHHHHTTC--SEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCC
T ss_pred CCeEEEEecCCcHhHHHHHhcCC--CeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhcccc
Confidence 56899999999987776665554 367888999999999988731 11 01 1111 2222 355
Q ss_pred -CccceeeeccccccCCCCcCHHHHHHHHhhcccCCcEEEEEeCH
Q 006662 538 -RTYDLIHADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDDV 581 (636)
Q Consensus 538 -~t~Dl~H~~~~fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~~ 581 (636)
.+||+|-|..++-..-+.-.+..+|-|+-|+|||||++|++...
T Consensus 127 ~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~ 171 (302)
T 2vdw_A 127 FGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTMD 171 (302)
T ss_dssp SSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 89999988654421111124689999999999999999998643
No 351
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=98.32 E-value=2.3e-07 Score=99.36 Aligned_cols=118 Identities=16% Similarity=0.182 Sum_probs=85.0
Q ss_pred CcceEeeecccchhhhhhhcCC--CeEEEEecCCCCCccchHHHHhh---------c-c----cchhh-ccccccC----
Q 006662 476 RYRNLLDMNAYLGGFAAALVDD--PLWVMNTVPVEAKINTLGVIYER---------G-L----IGTYQ-NWCEAMS---- 534 (636)
Q Consensus 476 ~~r~vlD~~~g~ggfaa~l~~~--~v~~mnv~~~~~~~~~l~~~~eR---------g-l----i~~~~-~~ce~~~---- 534 (636)
...+|||+|||.|.++..|++. +- ..|+.+|.++.++..+.++ | + +-.++ |. +.+.
T Consensus 83 ~~~~VLDlGcG~G~~~~~la~~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~-~~l~~~~~ 159 (383)
T 4fsd_A 83 EGATVLDLGCGTGRDVYLASKLVGEH--GKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFI-ENLATAEP 159 (383)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHTTT--CEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCT-TCGGGCBS
T ss_pred CCCEEEEecCccCHHHHHHHHHhCCC--CEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccH-HHhhhccc
Confidence 3578999999999999888764 21 2566777777899988887 5 2 22232 22 2221
Q ss_pred -CCC-CccceeeeccccccCCCCcCHHHHHHHHhhcccCCcEEEEEeCH-----------------------HHHHHHHH
Q 006662 535 -TYP-RTYDLIHADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDDV-----------------------DILVKIKS 589 (636)
Q Consensus 535 -~yp-~t~Dl~H~~~~fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~~-----------------------~~~~~~~~ 589 (636)
++| .+||+|+++.+|.... +.+.+|-|+-|+|||||++++.+.. -....+.+
T Consensus 160 ~~~~~~~fD~V~~~~~l~~~~---d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (383)
T 4fsd_A 160 EGVPDSSVDIVISNCVCNLST---NKLALFKEIHRVLRDGGELYFSDVYADRRLSEAAQQDPILYGECLGGALYLEDFRR 236 (383)
T ss_dssp CCCCTTCEEEEEEESCGGGCS---CHHHHHHHHHHHEEEEEEEEEEEEEESSCCCHHHHHCHHHHHTTCTTCCBHHHHHH
T ss_pred CCCCCCCEEEEEEccchhcCC---CHHHHHHHHHHHcCCCCEEEEEEeccccccCHhHhhhHHHhhcccccCCCHHHHHH
Confidence 555 7999999999888654 4689999999999999999997521 11266777
Q ss_pred HHhcCCCceE
Q 006662 590 ITDGMEWEGR 599 (636)
Q Consensus 590 ~~~~~~W~~~ 599 (636)
+++.-.++..
T Consensus 237 ll~~aGF~~v 246 (383)
T 4fsd_A 237 LVAEAGFRDV 246 (383)
T ss_dssp HHHHTTCCCE
T ss_pred HHHHCCCceE
Confidence 7777777543
No 352
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=98.31 E-value=7.7e-08 Score=99.16 Aligned_cols=102 Identities=15% Similarity=0.216 Sum_probs=72.2
Q ss_pred CcceEeeecccchhhhhhhcCC-CeEEEEecCCCCCccchHHHHhhc---------------------------------
Q 006662 476 RYRNLLDMNAYLGGFAAALVDD-PLWVMNTVPVEAKINTLGVIYERG--------------------------------- 521 (636)
Q Consensus 476 ~~r~vlD~~~g~ggfaa~l~~~-~v~~mnv~~~~~~~~~l~~~~eRg--------------------------------- 521 (636)
...+|||+|||.|.++..|++. +- ..|+.+|.++.++..+.++-
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~--~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGP--SRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKR 123 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCC--SEEEEEESCHHHHHHHHHTC---------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCC--CEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccc
Confidence 4678999999999999999875 22 26677788777888887651
Q ss_pred -------------------------------ccchhh-ccccc---cCC-CCCccceeeeccccccCC---CCcCHHHHH
Q 006662 522 -------------------------------LIGTYQ-NWCEA---MST-YPRTYDLIHADSIFSLYK---DRCEMEDVL 562 (636)
Q Consensus 522 -------------------------------li~~~~-~~ce~---~~~-yp~t~Dl~H~~~~fs~~~---~~c~~~~~l 562 (636)
-+..++ |+... +.. .+.+||+|.|.+++...+ ....+..+|
T Consensus 124 ~~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l 203 (292)
T 3g07_A 124 SCFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMF 203 (292)
T ss_dssp ------------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHH
T ss_pred ccccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHH
Confidence 111111 22211 112 348999999988764322 445678999
Q ss_pred HHHhhcccCCcEEEEEe
Q 006662 563 LEMDRILRPEGSVIIRD 579 (636)
Q Consensus 563 ~e~dRiLrPgG~~i~~d 579 (636)
-++-|+|||||++||..
T Consensus 204 ~~~~~~LkpGG~lil~~ 220 (292)
T 3g07_A 204 RRIYRHLRPGGILVLEP 220 (292)
T ss_dssp HHHHHHEEEEEEEEEEC
T ss_pred HHHHHHhCCCcEEEEec
Confidence 99999999999999974
No 353
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=98.31 E-value=1.6e-06 Score=81.93 Aligned_cols=128 Identities=13% Similarity=0.155 Sum_probs=88.6
Q ss_pred ceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhhcccchhhccccccCCCC-CccceeeeccccccCCC--
Q 006662 478 RNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERGLIGTYQNWCEAMSTYP-RTYDLIHADSIFSLYKD-- 554 (636)
Q Consensus 478 r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRgli~~~~~~ce~~~~yp-~t~Dl~H~~~~fs~~~~-- 554 (636)
.+|||+|||+|.++.+|+++. +|+.+|.++.++.. ... +.+++ +..+..++ .+||+|-++..|-....
T Consensus 25 ~~vLD~GcG~G~~~~~l~~~~----~v~gvD~s~~~~~~--~~~-~~~~~--~d~~~~~~~~~fD~i~~n~~~~~~~~~~ 95 (170)
T 3q87_B 25 KIVLDLGTSTGVITEQLRKRN----TVVSTDLNIRALES--HRG-GNLVR--ADLLCSINQESVDVVVFNPPYVPDTDDP 95 (170)
T ss_dssp CEEEEETCTTCHHHHHHTTTS----EEEEEESCHHHHHT--CSS-SCEEE--CSTTTTBCGGGCSEEEECCCCBTTCCCT
T ss_pred CeEEEeccCccHHHHHHHhcC----cEEEEECCHHHHhc--ccC-CeEEE--CChhhhcccCCCCEEEECCCCccCCccc
Confidence 489999999999999999986 88888888777776 222 22222 12223444 89999999766653221
Q ss_pred ----CcCHHHHHHHHhhcccCCcEEEEEe-CHHHHHHHHHHHhcCCCceEEeccCCCCCCcceEEEEE
Q 006662 555 ----RCEMEDVLLEMDRILRPEGSVIIRD-DVDILVKIKSITDGMEWEGRIADHENGPRQREKILFAN 617 (636)
Q Consensus 555 ----~c~~~~~l~e~dRiLrPgG~~i~~d-~~~~~~~~~~~~~~~~W~~~~~~~e~~~~~~~~~l~~~ 617 (636)
..+...++.++-|.| |||.+++.. .......+.++++...|+.......... .|++++.+
T Consensus 96 ~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~~~~~~l~~~l~~~gf~~~~~~~~~~~--~e~~~~~~ 160 (170)
T 3q87_B 96 IIGGGYLGREVIDRFVDAV-TVGMLYLLVIEANRPKEVLARLEERGYGTRILKVRKIL--GETVYIIK 160 (170)
T ss_dssp TTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGGGCHHHHHHHHHHTTCEEEEEEEEECS--SSEEEEEE
T ss_pred cccCCcchHHHHHHHHhhC-CCCEEEEEEecCCCHHHHHHHHHHCCCcEEEEEeeccC--CceEEEEE
Confidence 123346788888888 999999975 3456778888888888988755444333 45555554
No 354
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=98.31 E-value=8.1e-07 Score=87.27 Aligned_cols=118 Identities=11% Similarity=0.136 Sum_probs=80.5
Q ss_pred cceEeeecccchhhhhhhcCC-CeEEEEecCCCCCccchHHHHhh----cc--cchhh-ccccccCC-CC-Cccceeeec
Q 006662 477 YRNLLDMNAYLGGFAAALVDD-PLWVMNTVPVEAKINTLGVIYER----GL--IGTYQ-NWCEAMST-YP-RTYDLIHAD 546 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~~-~v~~mnv~~~~~~~~~l~~~~eR----gl--i~~~~-~~ce~~~~-yp-~t~Dl~H~~ 546 (636)
...|||+|||.|.++.+|++. +- .+|+.+|.+..++..+.++ |+ +-+++ |..+ +.. +| .+||.|++.
T Consensus 39 ~~~vLDiGcG~G~~~~~la~~~p~--~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~-l~~~~~~~~~d~v~~~ 115 (213)
T 2fca_A 39 NPIHIEVGTGKGQFISGMAKQNPD--INYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADT-LTDVFEPGEVKRVYLN 115 (213)
T ss_dssp CCEEEEECCTTSHHHHHHHHHCTT--SEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGG-HHHHCCTTSCCEEEEE
T ss_pred CceEEEEecCCCHHHHHHHHHCCC--CCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHH-HHhhcCcCCcCEEEEE
Confidence 457999999999999999764 22 3677888888888887765 54 33333 3322 322 44 789988763
Q ss_pred ccccc-------CCCCcCHHHHHHHHhhcccCCcEEEEE-eCHHHHHHHHHHHhcCCCceE
Q 006662 547 SIFSL-------YKDRCEMEDVLLEMDRILRPEGSVIIR-DDVDILVKIKSITDGMEWEGR 599 (636)
Q Consensus 547 ~~fs~-------~~~~c~~~~~l~e~dRiLrPgG~~i~~-d~~~~~~~~~~~~~~~~W~~~ 599 (636)
|+. .+.+-..+.+|-++-|+|+|||.+++. |..+....+.+++....|...
T Consensus 116 --~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~g~~~~ 174 (213)
T 2fca_A 116 --FSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDNRGLFEYSLKSFSEYGLLLT 174 (213)
T ss_dssp --SCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESCHHHHHHHHHHHHHHTCEEE
T ss_pred --CCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCccc
Confidence 321 112222478999999999999999986 566666666666655566543
No 355
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.30 E-value=1.6e-06 Score=94.86 Aligned_cols=114 Identities=18% Similarity=0.141 Sum_probs=80.7
Q ss_pred HHHHHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhc---------------CCEEEEcCcCCchHHHHHHHHHc----
Q 006662 202 DAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR---------------NILAVSFAPRDTHEAQVQFALER---- 262 (636)
Q Consensus 202 ~~~id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~---------------~v~vv~i~p~Dis~a~l~~A~er---- 262 (636)
...++.+.+++....+. +|||.|||+|.++..+++. ...+.++ |+++.+++.|+.+
T Consensus 157 ~~v~~~mv~~l~~~~~~--~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~---Ei~~~~~~lA~~nl~l~ 231 (445)
T 2okc_A 157 RPLIQAMVDCINPQMGE--TVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGV---DNTPLVVTLASMNLYLH 231 (445)
T ss_dssp HHHHHHHHHHHCCCTTC--CEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEE---ESCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCCCCCC--EEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEE---eCCHHHHHHHHHHHHHh
Confidence 44666777776544443 8999999999999888753 1233444 7777888777643
Q ss_pred CC---CeEEEEeccccCCCCCCCeeEEEecccccccccC----------------hHHHHHHHHhcccCCcEEEEEeC
Q 006662 263 GV---PALIGVMASIRLPYPSRAFDMAHCSRCLIPWGQY----------------DGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 263 g~---~~~~~~~d~~~Lpf~~~sFDlV~~s~~L~h~~~d----------------~~~~L~el~RvLKPGG~Liis~p 321 (636)
+. ...+..+|....+.. ..||+|+++..+.+.... ...++..+.++|||||++++..|
T Consensus 232 g~~~~~~~i~~gD~l~~~~~-~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p 308 (445)
T 2okc_A 232 GIGTDRSPIVCEDSLEKEPS-TLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLP 308 (445)
T ss_dssp TCCSSCCSEEECCTTTSCCS-SCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCcCCCCEeeCCCCCCccc-CCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEEC
Confidence 44 466777887766644 489999998766432111 13789999999999999999976
No 356
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=98.30 E-value=1e-06 Score=88.75 Aligned_cols=111 Identities=11% Similarity=0.149 Sum_probs=69.2
Q ss_pred HHHHHhhhccCCCCCcceEeeecccchhhhhhhcCC-C--eEEEEecCCCCCcc------chHHHHhh----cc---cch
Q 006662 462 TYYKSVDYQLAQPGRYRNLLDMNAYLGGFAAALVDD-P--LWVMNTVPVEAKIN------TLGVIYER----GL---IGT 525 (636)
Q Consensus 462 ~~y~~~~~~l~~~~~~r~vlD~~~g~ggfaa~l~~~-~--v~~mnv~~~~~~~~------~l~~~~eR----gl---i~~ 525 (636)
..+..++..+.. ....+|||+|||.|.++..|++. + . +|+.+|.++. ++..+.++ |+ +.+
T Consensus 30 ~~~~~l~~~~~~-~~~~~vLDiGcG~G~~~~~l~~~~g~~~---~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~ 105 (275)
T 3bkx_A 30 AHRLAIAEAWQV-KPGEKILEIGCGQGDLSAVLADQVGSSG---HVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTV 105 (275)
T ss_dssp HHHHHHHHHHTC-CTTCEEEEESCTTSHHHHHHHHHHCTTC---EEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEE
T ss_pred HHHHHHHHHcCC-CCCCEEEEeCCCCCHHHHHHHHHhCCCC---EEEEEECCccccccHHHHHHHHHHHHhcCCCCceEE
Confidence 344445444433 34678999999999999999865 1 3 3444455433 77776555 33 222
Q ss_pred hh-c-cccccCCCC-CccceeeeccccccCCCCcCHHHHHHHHhhcccCCcEEEEEe
Q 006662 526 YQ-N-WCEAMSTYP-RTYDLIHADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRD 579 (636)
Q Consensus 526 ~~-~-~ce~~~~yp-~t~Dl~H~~~~fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d 579 (636)
.+ | ....-.++| .+||+|++.+++....+ .+.++-.+.++|+|||++++.+
T Consensus 106 ~~~d~~~~~~~~~~~~~fD~v~~~~~l~~~~~---~~~~~~~~~~l~~~gG~l~~~~ 159 (275)
T 3bkx_A 106 HFNTNLSDDLGPIADQHFDRVVLAHSLWYFAS---ANALALLFKNMAAVCDHVDVAE 159 (275)
T ss_dssp ECSCCTTTCCGGGTTCCCSEEEEESCGGGSSC---HHHHHHHHHHHTTTCSEEEEEE
T ss_pred EECChhhhccCCCCCCCEEEEEEccchhhCCC---HHHHHHHHHHHhCCCCEEEEEE
Confidence 22 2 211222344 89999999888865443 3555556666666799999974
No 357
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=98.30 E-value=2.7e-07 Score=94.40 Aligned_cols=122 Identities=9% Similarity=0.053 Sum_probs=79.1
Q ss_pred CcceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhhc------------------ccc-------------
Q 006662 476 RYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERG------------------LIG------------- 524 (636)
Q Consensus 476 ~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRg------------------li~------------- 524 (636)
...+|||+|||.|.++..+...+. -+|+.+|.++.++..+.++- +-|
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 148 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSACSHF--EDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLR 148 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGGGGC--SEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHH
T ss_pred CCCeEEEECCCcChHHHHhhccCC--CeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHH
Confidence 357899999999996554444322 26777888888888766520 111
Q ss_pred -----hhh-ccccccC----CCC-CccceeeeccccccCCCC-cCHHHHHHHHhhcccCCcEEEEEeCH-----------
Q 006662 525 -----TYQ-NWCEAMS----TYP-RTYDLIHADSIFSLYKDR-CEMEDVLLEMDRILRPEGSVIIRDDV----------- 581 (636)
Q Consensus 525 -----~~~-~~ce~~~----~yp-~t~Dl~H~~~~fs~~~~~-c~~~~~l~e~dRiLrPgG~~i~~d~~----------- 581 (636)
+.+ |..+..+ .+| .+||+|-+..+|...... -+...+|-|+-|+|||||++++.+..
T Consensus 149 ~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~~~~~~~~~~~~ 228 (289)
T 2g72_A 149 ARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGALEESWYLAGEAR 228 (289)
T ss_dssp HHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEESCCEEEETTEE
T ss_pred hhhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEecCcceEEcCCee
Confidence 000 3222111 233 679999998877653322 35679999999999999999996311
Q ss_pred -----HHHHHHHHHHhcCCCceE
Q 006662 582 -----DILVKIKSITDGMEWEGR 599 (636)
Q Consensus 582 -----~~~~~~~~~~~~~~W~~~ 599 (636)
-....+.++++.-.++..
T Consensus 229 ~~~~~~~~~~l~~~l~~aGf~~~ 251 (289)
T 2g72_A 229 LTVVPVSEEEVREALVRSGYKVR 251 (289)
T ss_dssp EECCCCCHHHHHHHHHHTTEEEE
T ss_pred eeeccCCHHHHHHHHHHcCCeEE
Confidence 134667777777666654
No 358
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=98.30 E-value=4.3e-07 Score=96.03 Aligned_cols=97 Identities=18% Similarity=0.177 Sum_probs=66.9
Q ss_pred CcceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhh----cc---cchhhccccccCCCC-Cccceeeecc
Q 006662 476 RYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GL---IGTYQNWCEAMSTYP-RTYDLIHADS 547 (636)
Q Consensus 476 ~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl---i~~~~~~ce~~~~yp-~t~Dl~H~~~ 547 (636)
...+|||+|||.|.++..+++.+. -.|+.+|.+ .++..+.++ |+ +-+++.=.+.+ .+| ..||+|-+..
T Consensus 64 ~~~~VLDiGcGtG~ls~~la~~g~--~~v~gvD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~-~~~~~~~D~Ivs~~ 139 (340)
T 2fyt_A 64 KDKVVLDVGCGTGILSMFAAKAGA--KKVLGVDQS-EILYQAMDIIRLNKLEDTITLIKGKIEEV-HLPVEKVDVIISEW 139 (340)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTC--SEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTS-CCSCSCEEEEEECC
T ss_pred CCCEEEEeeccCcHHHHHHHHcCC--CEEEEEChH-HHHHHHHHHHHHcCCCCcEEEEEeeHHHh-cCCCCcEEEEEEcC
Confidence 356899999999999999988753 245566666 366666543 43 23333111222 355 8999999877
Q ss_pred ccccCCCCcCHHHHHHHHhhcccCCcEEE
Q 006662 548 IFSLYKDRCEMEDVLLEMDRILRPEGSVI 576 (636)
Q Consensus 548 ~fs~~~~~c~~~~~l~e~dRiLrPgG~~i 576 (636)
+.......-.++.+|.++.|+|||||.+|
T Consensus 140 ~~~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 140 MGYFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp CBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred chhhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 53333344457789999999999999998
No 359
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=98.29 E-value=1e-06 Score=90.26 Aligned_cols=115 Identities=11% Similarity=0.107 Sum_probs=82.7
Q ss_pred cceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhh----cccchhhccccccCCC--CCccceeeeccccc
Q 006662 477 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GLIGTYQNWCEAMSTY--PRTYDLIHADSIFS 550 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gli~~~~~~ce~~~~y--p~t~Dl~H~~~~fs 550 (636)
..+|||+|||+|+|+.++++..-- .|+.+|.++.++..+.++ |+-....-.+.....+ +.+||+|.++..+
T Consensus 126 ~~~VLDlgcG~G~~~~~la~~~~~--~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~~~~fD~Vi~~~p~- 202 (278)
T 2frn_A 126 DELVVDMFAGIGHLSLPIAVYGKA--KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENIADRILMGYVV- 202 (278)
T ss_dssp TCEEEETTCTTTTTHHHHHHHTCC--EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCSCEEEEEECCCS-
T ss_pred CCEEEEecccCCHHHHHHHHhCCC--EEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcccCCccEEEECCch-
Confidence 568999999999999999875431 466678777788777664 5532122222222223 5799999885443
Q ss_pred cCCCCcCHHHHHHHHhhcccCCcEEEEEeC-------HHHHHHHHHHHhcCCCceEE
Q 006662 551 LYKDRCEMEDVLLEMDRILRPEGSVIIRDD-------VDILVKIKSITDGMEWEGRI 600 (636)
Q Consensus 551 ~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~-------~~~~~~~~~~~~~~~W~~~~ 600 (636)
....++-++-|+|||||.+++.+. .+....+.+.++...|++..
T Consensus 203 ------~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~i~~~~~~~G~~~~~ 253 (278)
T 2frn_A 203 ------RTHEFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEYGYDVEK 253 (278)
T ss_dssp ------SGGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHTTCEEEE
T ss_pred ------hHHHHHHHHHHHCCCCeEEEEEEeeccccccccHHHHHHHHHHHcCCeeEE
Confidence 235788899999999999999643 24678888999999998876
No 360
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=98.28 E-value=3e-07 Score=93.36 Aligned_cols=101 Identities=15% Similarity=0.109 Sum_probs=72.6
Q ss_pred cceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhh----cc---cchhh-ccccccCCC--CCccceeeec
Q 006662 477 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GL---IGTYQ-NWCEAMSTY--PRTYDLIHAD 546 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl---i~~~~-~~ce~~~~y--p~t~Dl~H~~ 546 (636)
..+|||+|||.|.++.+|++.+. .+|+.+|.++.++..+.++ |+ +...+ |.. .. ++ +.+||+|.+.
T Consensus 65 ~~~vLDiGcG~G~~~~~l~~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~-~~~~~~~fD~v~~~ 140 (298)
T 1ri5_A 65 GDSVLDLGCGKGGDLLKYERAGI--GEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSY-GR-HMDLGKEFDVISSQ 140 (298)
T ss_dssp TCEEEEETCTTTTTHHHHHHHTC--SEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTT-TS-CCCCSSCEEEEEEE
T ss_pred CCeEEEECCCCCHHHHHHHHCCC--CEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCcc-cc-ccCCCCCcCEEEEC
Confidence 56899999999999999887653 2567777777888887776 22 22222 221 22 33 4799999998
Q ss_pred cccccC-CCCcCHHHHHHHHhhcccCCcEEEEEeCH
Q 006662 547 SIFSLY-KDRCEMEDVLLEMDRILRPEGSVIIRDDV 581 (636)
Q Consensus 547 ~~fs~~-~~~c~~~~~l~e~dRiLrPgG~~i~~d~~ 581 (636)
+++... .+.-+...+|-++-|+|||||.+++....
T Consensus 141 ~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 176 (298)
T 1ri5_A 141 FSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPS 176 (298)
T ss_dssp SCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred chhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 776431 33345678999999999999999998643
No 361
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=98.28 E-value=2.2e-06 Score=86.11 Aligned_cols=133 Identities=14% Similarity=0.131 Sum_probs=86.4
Q ss_pred cceEeeecccchhhhhhhcCC---CeEEEEecCCCCCccchHHHHhh----ccc---chhh-ccccccCCCC--Ccccee
Q 006662 477 YRNLLDMNAYLGGFAAALVDD---PLWVMNTVPVEAKINTLGVIYER----GLI---GTYQ-NWCEAMSTYP--RTYDLI 543 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~~---~v~~mnv~~~~~~~~~l~~~~eR----gli---~~~~-~~ce~~~~yp--~t~Dl~ 543 (636)
.++|||+|||.|.++.+|++. .. .|+.+|.++.++..+.++ |+- -++. |..+.+...+ .+||+|
T Consensus 64 ~~~VLdiG~G~G~~~~~la~~~~~~~---~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V 140 (248)
T 3tfw_A 64 AKRILEIGTLGGYSTIWMARELPADG---QLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLI 140 (248)
T ss_dssp CSEEEEECCTTSHHHHHHHTTSCTTC---EEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEE
T ss_pred CCEEEEecCCchHHHHHHHHhCCCCC---EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEE
Confidence 579999999999999999876 32 455667666788877766 552 2222 3333334444 499999
Q ss_pred eeccccccCCCCcCHHHHHHHHhhcccCCcEEEEEeCH------------HHHHHHHH----HHhcCCCceEEeccCCCC
Q 006662 544 HADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDDV------------DILVKIKS----ITDGMEWEGRIADHENGP 607 (636)
Q Consensus 544 H~~~~fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~~------------~~~~~~~~----~~~~~~W~~~~~~~e~~~ 607 (636)
.+++- .-..+.+|-++-|+|||||++++.+-. .....+++ +...-+|+..+.-.- |.
T Consensus 141 ~~d~~------~~~~~~~l~~~~~~LkpGG~lv~~~~~~~g~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~-g~ 213 (248)
T 3tfw_A 141 FIDAD------KPNNPHYLRWALRYSRPGTLIIGDNVVRDGEVVNPQSADERVQGVRQFIEMMGAEPRLTATALQTV-GT 213 (248)
T ss_dssp EECSC------GGGHHHHHHHHHHTCCTTCEEEEECCSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEEEEEEEC-ST
T ss_pred EECCc------hHHHHHHHHHHHHhcCCCeEEEEeCCCcCCcccCccccchHHHHHHHHHHHHhhCCCEEEEEeecC-CC
Confidence 88542 224567899999999999999986421 12223333 344556766654111 21
Q ss_pred CCcceEEEEEec
Q 006662 608 RQREKILFANKK 619 (636)
Q Consensus 608 ~~~~~~l~~~K~ 619 (636)
...+.+.+++|+
T Consensus 214 ~~~DG~~i~~~~ 225 (248)
T 3tfw_A 214 KGWDGFTLAWVN 225 (248)
T ss_dssp TCSEEEEEEEEC
T ss_pred CCCCeeEEEEEe
Confidence 235889999986
No 362
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=98.28 E-value=1.1e-06 Score=87.31 Aligned_cols=130 Identities=12% Similarity=0.215 Sum_probs=84.4
Q ss_pred cceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhh----cc---cchhh-ccccccC-CCCCccceeeecc
Q 006662 477 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GL---IGTYQ-NWCEAMS-TYPRTYDLIHADS 547 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl---i~~~~-~~ce~~~-~yp~t~Dl~H~~~ 547 (636)
..+|||+|||.|.++.+|++..- ...|+.+|.++.++..+.++ |+ +-+++ |..+.+. ..+.+||+|.++.
T Consensus 72 ~~~vLDiG~G~G~~~~~la~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~~ 150 (232)
T 3ntv_A 72 VKNILEIGTAIGYSSMQFASISD-DIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIFIDA 150 (232)
T ss_dssp CCEEEEECCSSSHHHHHHHTTCT-TCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEEET
T ss_pred CCEEEEEeCchhHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEEcC
Confidence 56899999999999999988310 23566667776777777654 43 23333 3333333 3468999998753
Q ss_pred ccccCCCCcCHHHHHHHHhhcccCCcEEEEEeC-----------------HHHHHHHHHH----HhcCCCceEEeccCCC
Q 006662 548 IFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDD-----------------VDILVKIKSI----TDGMEWEGRIADHENG 606 (636)
Q Consensus 548 ~fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~-----------------~~~~~~~~~~----~~~~~W~~~~~~~e~~ 606 (636)
- .-....++-++-|+|||||.+++.+- ......++++ .+.-++...+...
T Consensus 151 ~------~~~~~~~l~~~~~~LkpgG~lv~d~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~--- 221 (232)
T 3ntv_A 151 A------KAQSKKFFEIYTPLLKHQGLVITDNVLYHGFVSDIGIVRSRNVRQMVKKVQDYNEWLIKQPGYTTNFLNI--- 221 (232)
T ss_dssp T------SSSHHHHHHHHGGGEEEEEEEEEECTTGGGGGGCGGGGGCHHHHHHHHHHHHHHHHHHTCTTEEEEEECS---
T ss_pred c------HHHHHHHHHHHHHhcCCCeEEEEeeCCcCccccCcccccchhhhHHHHHHHHHHHHHhcCCCeEEEEEEc---
Confidence 2 33467899999999999999999321 1122333333 4445666665522
Q ss_pred CCCcceEEEEEec
Q 006662 607 PRQREKILFANKK 619 (636)
Q Consensus 607 ~~~~~~~l~~~K~ 619 (636)
.+.+.+++|+
T Consensus 222 ---~dG~~i~~k~ 231 (232)
T 3ntv_A 222 ---DDGLAISIKG 231 (232)
T ss_dssp ---TTCEEEEEEC
T ss_pred ---CCceEEEEEC
Confidence 3678888874
No 363
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=98.26 E-value=1.7e-06 Score=84.33 Aligned_cols=122 Identities=12% Similarity=0.150 Sum_probs=81.2
Q ss_pred cceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhh----cc--cchhh-ccccccCC-CC-Cccceeeecc
Q 006662 477 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GL--IGTYQ-NWCEAMST-YP-RTYDLIHADS 547 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl--i~~~~-~~ce~~~~-yp-~t~Dl~H~~~ 547 (636)
...|||+|||.|.++.+|++..- -.+|+.+|.++.++..+.++ |+ +-+++ |+.+ +.. +| .+||+|.++.
T Consensus 42 ~~~vLDiGcG~G~~~~~la~~~p-~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~-~~~~~~~~~~D~i~~~~ 119 (214)
T 1yzh_A 42 NPIHVEVGSGKGAFVSGMAKQNP-DINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSD-LTDYFEDGEIDRLYLNF 119 (214)
T ss_dssp CCEEEEESCTTSHHHHHHHHHCT-TSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSC-GGGTSCTTCCSEEEEES
T ss_pred CCeEEEEccCcCHHHHHHHHHCC-CCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHH-HHhhcCCCCCCEEEEEC
Confidence 45799999999999999876510 13567777777788877664 44 22333 3332 332 44 7899999863
Q ss_pred ccccC-----CCCcCHHHHHHHHhhcccCCcEEEEE-eCHHHHHHHHHHHhcCCCceEE
Q 006662 548 IFSLY-----KDRCEMEDVLLEMDRILRPEGSVIIR-DDVDILVKIKSITDGMEWEGRI 600 (636)
Q Consensus 548 ~fs~~-----~~~c~~~~~l~e~dRiLrPgG~~i~~-d~~~~~~~~~~~~~~~~W~~~~ 600 (636)
..... ..+-..+.+|-++-|+|+|||.+++. |..+....+.+++....|....
T Consensus 120 ~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~g~~~~~ 178 (214)
T 1yzh_A 120 SDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDNRGLFEYSLVSFSQYGMKLNG 178 (214)
T ss_dssp CCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHHTCEEEE
T ss_pred CCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHCCCeeee
Confidence 21111 11123468999999999999999996 4556677777776666676543
No 364
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=98.26 E-value=4.4e-07 Score=96.21 Aligned_cols=98 Identities=15% Similarity=0.176 Sum_probs=70.9
Q ss_pred cceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHh----hcc---cchhhccccccCCCC-Cccceeeeccc
Q 006662 477 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYE----RGL---IGTYQNWCEAMSTYP-RTYDLIHADSI 548 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~e----Rgl---i~~~~~~ce~~~~yp-~t~Dl~H~~~~ 548 (636)
..+|||+|||.|.++..|++.+. ..|+.+|.+ .++..+.+ .|+ +.+++.=.+.+ ++| .+||+|.+..+
T Consensus 67 ~~~VLDvGcG~G~~~~~la~~g~--~~v~gvD~s-~~l~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~fD~Iis~~~ 142 (349)
T 3q7e_A 67 DKVVLDVGSGTGILCMFAAKAGA--RKVIGIECS-SISDYAVKIVKANKLDHVVTIIKGKVEEV-ELPVEKVDIIISEWM 142 (349)
T ss_dssp TCEEEEESCTTSHHHHHHHHTTC--SEEEEEECS-THHHHHHHHHHHTTCTTTEEEEESCTTTC-CCSSSCEEEEEECCC
T ss_pred CCEEEEEeccchHHHHHHHHCCC--CEEEEECcH-HHHHHHHHHHHHcCCCCcEEEEECcHHHc-cCCCCceEEEEEccc
Confidence 57899999999999999988754 355666666 46666554 354 23333111222 456 89999999776
Q ss_pred cccCCCCcCHHHHHHHHhhcccCCcEEEEE
Q 006662 549 FSLYKDRCEMEDVLLEMDRILRPEGSVIIR 578 (636)
Q Consensus 549 fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~ 578 (636)
.......-.++.+|.+++|+|||||.+|..
T Consensus 143 ~~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 172 (349)
T 3q7e_A 143 GYCLFYESMLNTVLHARDKWLAPDGLIFPD 172 (349)
T ss_dssp BBTBTBTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred cccccCchhHHHHHHHHHHhCCCCCEEccc
Confidence 665555667889999999999999999753
No 365
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=98.24 E-value=6.9e-07 Score=88.49 Aligned_cols=116 Identities=14% Similarity=0.118 Sum_probs=75.9
Q ss_pred CcceEeeecccchhhhhhhcCC-CeEEEEecCCCCCccchHHHHhh----cc--cchhh-ccccccCC-CC-Cccceeee
Q 006662 476 RYRNLLDMNAYLGGFAAALVDD-PLWVMNTVPVEAKINTLGVIYER----GL--IGTYQ-NWCEAMST-YP-RTYDLIHA 545 (636)
Q Consensus 476 ~~r~vlD~~~g~ggfaa~l~~~-~v~~mnv~~~~~~~~~l~~~~eR----gl--i~~~~-~~ce~~~~-yp-~t~Dl~H~ 545 (636)
.-..|||+|||.|.++.+|++. +- .+|+.+|.++.++..+.++ |+ +-+++ |-.+-+.. +| .+||.|++
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~--~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~ 111 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPE--QDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQL 111 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTT--SEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEE
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCC--CeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEE
Confidence 3568999999999999999754 21 2566778777888776654 54 22222 22222221 44 89999987
Q ss_pred ccccccCCCC-----cCHHHHHHHHhhcccCCcEEEEE-eCHHHHHHHHHHHhc
Q 006662 546 DSIFSLYKDR-----CEMEDVLLEMDRILRPEGSVIIR-DDVDILVKIKSITDG 593 (636)
Q Consensus 546 ~~~fs~~~~~-----c~~~~~l~e~dRiLrPgG~~i~~-d~~~~~~~~~~~~~~ 593 (636)
+......+.+ -.-+.+|-++-|+|||||.+++. |.....+.+.+++..
T Consensus 112 ~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~~~~~~~~~~~~~~ 165 (218)
T 3dxy_A 112 FFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDWEPYAEHMLEVMSS 165 (218)
T ss_dssp ESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHT
T ss_pred eCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHh
Confidence 4222212222 22247999999999999999995 556667777776554
No 366
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.24 E-value=2.5e-06 Score=88.50 Aligned_cols=87 Identities=17% Similarity=0.070 Sum_probs=58.0
Q ss_pred cEEEEeCCCC------cHHHHHHhhc---CCEEEEcCcCCchHHHHHHHHHcCCCeEE-EEeccccCCCCCCCeeEEEec
Q 006662 220 RTAIDTGCGV------ASWGAYLMSR---NILAVSFAPRDTHEAQVQFALERGVPALI-GVMASIRLPYPSRAFDMAHCS 289 (636)
Q Consensus 220 r~VLDIGCGt------G~~a~~La~~---~v~vv~i~p~Dis~a~l~~A~erg~~~~~-~~~d~~~Lpf~~~sFDlV~~s 289 (636)
.+|||+|||+ |. ..++++ +..++++ |+++. + ..+.+ .++|...++++ ++||+|+++
T Consensus 65 ~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gv---Dis~~-v-------~~v~~~i~gD~~~~~~~-~~fD~Vvsn 130 (290)
T 2xyq_A 65 MRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDS---DLNDF-V-------SDADSTLIGDCATVHTA-NKWDLIISD 130 (290)
T ss_dssp CEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEE---ESSCC-B-------CSSSEEEESCGGGCCCS-SCEEEEEEC
T ss_pred CEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEE---ECCCC-C-------CCCEEEEECccccCCcc-CcccEEEEc
Confidence 4999999944 76 333332 3344444 44443 1 24567 88898887765 689999996
Q ss_pred ccccccc-----c-----C-hHHHHHHHHhcccCCcEEEEEeC
Q 006662 290 RCLIPWG-----Q-----Y-DGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 290 ~~L~h~~-----~-----d-~~~~L~el~RvLKPGG~Liis~p 321 (636)
... ++. + + ...+++++.|+|||||.|++..+
T Consensus 131 ~~~-~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~ 172 (290)
T 2xyq_A 131 MYD-PRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKIT 172 (290)
T ss_dssp CCC-CC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCc-cccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 432 211 0 1 14789999999999999999764
No 367
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=98.24 E-value=1.2e-06 Score=85.66 Aligned_cols=133 Identities=16% Similarity=0.137 Sum_probs=83.0
Q ss_pred cceEeeecccchhhhhhhcCC---CeEEEEecCCCCCccchHHHHhh----cc---cchhh-ccccccCCCC----Cccc
Q 006662 477 YRNLLDMNAYLGGFAAALVDD---PLWVMNTVPVEAKINTLGVIYER----GL---IGTYQ-NWCEAMSTYP----RTYD 541 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~~---~v~~mnv~~~~~~~~~l~~~~eR----gl---i~~~~-~~ce~~~~yp----~t~D 541 (636)
..+|||+|||.|.++.+|++. +. .|+.+|.++.++..+.++ |+ +-+.+ |..+.+..++ .+||
T Consensus 59 ~~~vLdiG~G~G~~~~~la~~~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD 135 (223)
T 3duw_A 59 ARNILEIGTLGGYSTIWLARGLSSGG---RVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFD 135 (223)
T ss_dssp CSEEEEECCTTSHHHHHHHTTCCSSC---EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCS
T ss_pred CCEEEEecCCccHHHHHHHHhCCCCC---EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcC
Confidence 568999999999999999876 32 456667666777776654 55 22222 3223222222 5799
Q ss_pred eeeeccccccCCCCcCHHHHHHHHhhcccCCcEEEEEeCH------------HHHHHHHH----HHhcCCCceEEeccCC
Q 006662 542 LIHADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDDV------------DILVKIKS----ITDGMEWEGRIADHEN 605 (636)
Q Consensus 542 l~H~~~~fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~~------------~~~~~~~~----~~~~~~W~~~~~~~e~ 605 (636)
+|.+++..+ ..+.+|-++-|+|||||.+++.+.. .....+++ +...-+|+..+.-.-
T Consensus 136 ~v~~d~~~~------~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~- 208 (223)
T 3duw_A 136 FIFIDADKQ------NNPAYFEWALKLSRPGTVIIGDNVVREGEVIDNTSNDPRVQGIRRFYELIAAEPRVSATALQTV- 208 (223)
T ss_dssp EEEECSCGG------GHHHHHHHHHHTCCTTCEEEEESCSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEEEEEEEE-
T ss_pred EEEEcCCcH------HHHHHHHHHHHhcCCCcEEEEeCCCcCCcccCccccchHHHHHHHHHHHHhhCCCeEEEEEecc-
Confidence 998865422 4568999999999999999986321 11223333 334446666654330
Q ss_pred CCCCcceEEEEEec
Q 006662 606 GPRQREKILFANKK 619 (636)
Q Consensus 606 ~~~~~~~~l~~~K~ 619 (636)
+..+.+.+++++|+
T Consensus 209 ~~~~~dG~~~~~~~ 222 (223)
T 3duw_A 209 GSKGYDGFIMAVVK 222 (223)
T ss_dssp ETTEEEEEEEEEEC
T ss_pred CCCCCCeeEEEEEe
Confidence 11235778888763
No 368
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=98.23 E-value=1.3e-06 Score=82.28 Aligned_cols=131 Identities=15% Similarity=0.111 Sum_probs=84.0
Q ss_pred CCcceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhhcc--cchhhccccccCC--CC-Cccceeeecccc
Q 006662 475 GRYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERGL--IGTYQNWCEAMST--YP-RTYDLIHADSIF 549 (636)
Q Consensus 475 ~~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRgl--i~~~~~~ce~~~~--yp-~t~Dl~H~~~~f 549 (636)
+....|||++||. +.+|.++.++..+.+|-- +...+.=.+.+.. +| .+||+|.+..++
T Consensus 11 ~~g~~vL~~~~g~-----------------v~vD~s~~ml~~a~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V~~~~~l 73 (176)
T 2ld4_A 11 SAGQFVAVVWDKS-----------------SPVEALKGLVDKLQALTGNEGRVSVENIKQLLQSAHKESSFDIILSGLVP 73 (176)
T ss_dssp CTTSEEEEEECTT-----------------SCHHHHHHHHHHHHHHTTTTSEEEEEEGGGGGGGCCCSSCEEEEEECCST
T ss_pred CCCCEEEEecCCc-----------------eeeeCCHHHHHHHHHhcccCcEEEEechhcCccccCCCCCEeEEEECChh
Confidence 4478999999985 126777789998888741 2222211123333 44 899999997766
Q ss_pred ccCCCCcCHHHHHHHHhhcccCCcEEEEEeCHH----------HHHHHHHHHhcCCCceEEeccCCCCCC----------
Q 006662 550 SLYKDRCEMEDVLLEMDRILRPEGSVIIRDDVD----------ILVKIKSITDGMEWEGRIADHENGPRQ---------- 609 (636)
Q Consensus 550 s~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~~~----------~~~~~~~~~~~~~W~~~~~~~e~~~~~---------- 609 (636)
... ..+.+.+|.|+-|+|||||++++.+... ....+.+.++.-.+ +.+.+....+..
T Consensus 74 ~~~--~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf-i~~~~~~~~~~~~~~~~~~~~~ 150 (176)
T 2ld4_A 74 GST--TLHSAEILAEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALTLSGL-VEVKELQREPLTPEEVQSVREH 150 (176)
T ss_dssp TCC--CCCCHHHHHHHHHHEEEEEEEEEEEEEESSSCSSSSSCCHHHHHHHHHHTTC-EEEEEEEEECCCHHHHHHHHHH
T ss_pred hhc--ccCHHHHHHHHHHHCCCCEEEEEEcccccccccccccCCHHHHHHHHHHCCC-cEeecCcccCCCHHHHHHHHHH
Confidence 543 1345899999999999999999975321 14566666665555 443332211111
Q ss_pred --------cceEEEEEecCCCCCC
Q 006662 610 --------REKILFANKKYWTAPA 625 (636)
Q Consensus 610 --------~~~~l~~~K~~w~~~~ 625 (636)
.-.+++++|+-|..++
T Consensus 151 ~g~~~~~~~~~~~~a~Kp~~~~gs 174 (176)
T 2ld4_A 151 LGHESDNLLFVQITGKKPNFEVGS 174 (176)
T ss_dssp TCCCCSSEEEEEEEEECCCSSCCS
T ss_pred hcccCCceEEEEEeccCCcccccC
Confidence 1458899999887654
No 369
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=98.23 E-value=3.5e-07 Score=90.19 Aligned_cols=110 Identities=12% Similarity=0.114 Sum_probs=76.2
Q ss_pred cceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhhcc-cchhh-ccccccCCC-CCccceeeeccccccCC
Q 006662 477 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERGL-IGTYQ-NWCEAMSTY-PRTYDLIHADSIFSLYK 553 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRgl-i~~~~-~~ce~~~~y-p~t~Dl~H~~~~fs~~~ 553 (636)
..+|||+|||.|.++.+|++.+. .|+.+|.++.++..+.++.- +.+++ |+.+.++.- +.+||+|.+.
T Consensus 49 ~~~vLDiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~------- 118 (226)
T 3m33_A 49 QTRVLEAGCGHGPDAARFGPQAA---RWAAYDFSPELLKLARANAPHADVYEWNGKGELPAGLGAPFGLIVSR------- 118 (226)
T ss_dssp TCEEEEESCTTSHHHHHHGGGSS---EEEEEESCHHHHHHHHHHCTTSEEEECCSCSSCCTTCCCCEEEEEEE-------
T ss_pred CCeEEEeCCCCCHHHHHHHHcCC---EEEEEECCHHHHHHHHHhCCCceEEEcchhhccCCcCCCCEEEEEeC-------
Confidence 46899999999999999998853 67777888889999988822 22222 443333322 4799999984
Q ss_pred CCcCHHHHHHHHhhcccCCcEEEEEeCHHHHHHHHHHHhcCCCce
Q 006662 554 DRCEMEDVLLEMDRILRPEGSVIIRDDVDILVKIKSITDGMEWEG 598 (636)
Q Consensus 554 ~~c~~~~~l~e~dRiLrPgG~~i~~d~~~~~~~~~~~~~~~~W~~ 598 (636)
-+...+|.++.|+|||||.++..........+.+.+....++.
T Consensus 119 --~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~~~Gf~~ 161 (226)
T 3m33_A 119 --RGPTSVILRLPELAAPDAHFLYVGPRLNVPEVPERLAAVGWDI 161 (226)
T ss_dssp --SCCSGGGGGHHHHEEEEEEEEEEESSSCCTHHHHHHHHTTCEE
T ss_pred --CCHHHHHHHHHHHcCCCcEEEEeCCcCCHHHHHHHHHHCCCeE
Confidence 2456889999999999999994432222334455555544443
No 370
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=98.23 E-value=8.6e-07 Score=88.76 Aligned_cols=111 Identities=14% Similarity=0.115 Sum_probs=69.4
Q ss_pred ceEeeecccchhhhhhhcCC-----CeEEEEecCCCCCccchHHHHhhcc---cchhh-ccccc--cCCCC-Cccceeee
Q 006662 478 RNLLDMNAYLGGFAAALVDD-----PLWVMNTVPVEAKINTLGVIYERGL---IGTYQ-NWCEA--MSTYP-RTYDLIHA 545 (636)
Q Consensus 478 r~vlD~~~g~ggfaa~l~~~-----~v~~mnv~~~~~~~~~l~~~~eRgl---i~~~~-~~ce~--~~~yp-~t~Dl~H~ 545 (636)
.+|||+|||.|..++.|++. +- -.|+.+|.++.++..+. ++ +-+++ |..+. +...+ .+||+|++
T Consensus 83 ~~VLDiG~GtG~~t~~la~~~~~~~~~--~~V~gvD~s~~~l~~a~--~~~~~v~~~~gD~~~~~~l~~~~~~~fD~I~~ 158 (236)
T 2bm8_A 83 RTIVELGVYNGGSLAWFRDLTKIMGID--CQVIGIDRDLSRCQIPA--SDMENITLHQGDCSDLTTFEHLREMAHPLIFI 158 (236)
T ss_dssp SEEEEECCTTSHHHHHHHHHHHHTTCC--CEEEEEESCCTTCCCCG--GGCTTEEEEECCSSCSGGGGGGSSSCSSEEEE
T ss_pred CEEEEEeCCCCHHHHHHHHhhhhcCCC--CEEEEEeCChHHHHHHh--ccCCceEEEECcchhHHHHHhhccCCCCEEEE
Confidence 58999999999999998764 11 13344444444544443 33 22222 32221 12223 37999998
Q ss_pred ccccccCCCCcCHHHHHHHHhh-cccCCcEEEEEeCH-----HHHHHHHHHHhcC--CCce
Q 006662 546 DSIFSLYKDRCEMEDVLLEMDR-ILRPEGSVIIRDDV-----DILVKIKSITDGM--EWEG 598 (636)
Q Consensus 546 ~~~fs~~~~~c~~~~~l~e~dR-iLrPgG~~i~~d~~-----~~~~~~~~~~~~~--~W~~ 598 (636)
++. + -+.+.+|.|+.| +|||||++++.|.. .....+.++++.. .++.
T Consensus 159 d~~----~--~~~~~~l~~~~r~~LkpGG~lv~~d~~~~~~~~~~~~~~~~l~~~~~~f~~ 213 (236)
T 2bm8_A 159 DNA----H--ANTFNIMKWAVDHLLEEGDYFIIEDMIPYWYRYAPQLFSEYLGAFRDVLSM 213 (236)
T ss_dssp ESS----C--SSHHHHHHHHHHHTCCTTCEEEECSCHHHHHHHCHHHHHHHHHTTTTTEEE
T ss_pred CCc----h--HhHHHHHHHHHHhhCCCCCEEEEEeCcccccccCHHHHHHHHHhCcccEEE
Confidence 654 1 267889999998 99999999997631 1123677777776 4554
No 371
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=98.21 E-value=5e-07 Score=85.10 Aligned_cols=99 Identities=18% Similarity=0.225 Sum_probs=69.5
Q ss_pred cceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhh----cc---cchhh-ccccccCCCCCccceeeeccc
Q 006662 477 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GL---IGTYQ-NWCEAMSTYPRTYDLIHADSI 548 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl---i~~~~-~~ce~~~~yp~t~Dl~H~~~~ 548 (636)
..+|||+|||.|.++.+|++.+. -+|+.+|.++.++..+.++ |+ +-+++ |+.+.+...+..||+|.++..
T Consensus 32 ~~~vLDlGcG~G~~~~~l~~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~i~~~~~ 109 (177)
T 2esr_A 32 GGRVLDLFAGSGGLAIEAVSRGM--SAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLTGRFDLVFLDPP 109 (177)
T ss_dssp SCEEEEETCTTCHHHHHHHHTTC--CEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBCSCEEEEEECCS
T ss_pred CCeEEEeCCCCCHHHHHHHHcCC--CEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhcCCCCEEEECCC
Confidence 56899999999999999988754 4667778877788877654 33 22222 333323334577999999766
Q ss_pred cccCCCCcCHHHHHHHHh--hcccCCcEEEEEeCH
Q 006662 549 FSLYKDRCEMEDVLLEMD--RILRPEGSVIIRDDV 581 (636)
Q Consensus 549 fs~~~~~c~~~~~l~e~d--RiLrPgG~~i~~d~~ 581 (636)
|.. ...+.++.++. |+|+|||.+++....
T Consensus 110 ~~~----~~~~~~~~~l~~~~~L~~gG~l~~~~~~ 140 (177)
T 2esr_A 110 YAK----ETIVATIEALAAKNLLSEQVMVVCETDK 140 (177)
T ss_dssp SHH----HHHHHHHHHHHHTTCEEEEEEEEEEEET
T ss_pred CCc----chHHHHHHHHHhCCCcCCCcEEEEEECC
Confidence 532 23466677776 999999999997543
No 372
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.20 E-value=1.4e-06 Score=85.28 Aligned_cols=129 Identities=18% Similarity=0.205 Sum_probs=83.0
Q ss_pred cceEeeecccchhhhhhhcCC-C-eEEEEecCCCCCccchHHHHhh----cc---cchhh-ccccccCCCC-----Cccc
Q 006662 477 YRNLLDMNAYLGGFAAALVDD-P-LWVMNTVPVEAKINTLGVIYER----GL---IGTYQ-NWCEAMSTYP-----RTYD 541 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~~-~-v~~mnv~~~~~~~~~l~~~~eR----gl---i~~~~-~~ce~~~~yp-----~t~D 541 (636)
..+|||+|||.|.++.+|++. + - ..|+.+|.++.++..+.++ |+ +-+++ |..+.+..++ .+||
T Consensus 65 ~~~vLdiG~G~G~~~~~la~~~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD 142 (225)
T 3tr6_A 65 AKKVIDIGTFTGYSAIAMGLALPKD--GTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYD 142 (225)
T ss_dssp CSEEEEECCTTSHHHHHHHTTCCTT--CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEE
T ss_pred CCEEEEeCCcchHHHHHHHHhCCCC--CEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCcc
Confidence 458999999999999999875 1 1 2455666666777777665 54 22222 3333333333 7899
Q ss_pred eeeeccccccCCCCcCHHHHHHHHhhcccCCcEEEEEeCH------------HHHHHHHH----HHhcCCCceEEeccCC
Q 006662 542 LIHADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDDV------------DILVKIKS----ITDGMEWEGRIADHEN 605 (636)
Q Consensus 542 l~H~~~~fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~~------------~~~~~~~~----~~~~~~W~~~~~~~e~ 605 (636)
+|.+++. .-....++-++-|+|||||++++.|-. .....+++ +...-+|+..+.-.
T Consensus 143 ~v~~~~~------~~~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~-- 214 (225)
T 3tr6_A 143 LIYIDAD------KANTDLYYEESLKLLREGGLIAVDNVLRRGQVADEENQSENNQLIRLFNQKVYKDERVDMILIPI-- 214 (225)
T ss_dssp EEEECSC------GGGHHHHHHHHHHHEEEEEEEEEECSSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEEEEECS--
T ss_pred EEEECCC------HHHHHHHHHHHHHhcCCCcEEEEeCCCcCCcccCccccChHHHHHHHHHHHHhcCCCeEEEEEEc--
Confidence 9987542 234678899999999999999997432 11223333 33444566665422
Q ss_pred CCCCcceEEEEEec
Q 006662 606 GPRQREKILFANKK 619 (636)
Q Consensus 606 ~~~~~~~~l~~~K~ 619 (636)
.+.+++++|+
T Consensus 215 ----~dG~~~~~k~ 224 (225)
T 3tr6_A 215 ----GDGLTLARKK 224 (225)
T ss_dssp ----TTCEEEEEEC
T ss_pred ----CCccEEEEEC
Confidence 4578888874
No 373
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=98.19 E-value=2.1e-06 Score=86.04 Aligned_cols=116 Identities=17% Similarity=0.169 Sum_probs=76.6
Q ss_pred CcceEeeecccchhhhhhhcCC-CeEEEEecCCCCCccchHHHHhh----------cc--cchhh-ccccccCC-CC-Cc
Q 006662 476 RYRNLLDMNAYLGGFAAALVDD-PLWVMNTVPVEAKINTLGVIYER----------GL--IGTYQ-NWCEAMST-YP-RT 539 (636)
Q Consensus 476 ~~r~vlD~~~g~ggfaa~l~~~-~v~~mnv~~~~~~~~~l~~~~eR----------gl--i~~~~-~~ce~~~~-yp-~t 539 (636)
.-..|||+|||.|.++.+|++. +- .+|+.+|.+..++..+.++ |+ +-+++ |.-+.+.. +| .+
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~~p~--~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~ 123 (235)
T 3ckk_A 46 AQVEFADIGCGYGGLLVELSPLFPD--TLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQ 123 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHGGGSTT--SEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTC
T ss_pred CCCeEEEEccCCcHHHHHHHHHCCC--CeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcC
Confidence 3568999999999999999865 22 3677778887888877543 33 22222 22111221 44 89
Q ss_pred cceeeecccccc-------CCCCcCHHHHHHHHhhcccCCcEEEEE-eCHHHHHHHHHHHhcCC
Q 006662 540 YDLIHADSIFSL-------YKDRCEMEDVLLEMDRILRPEGSVIIR-DDVDILVKIKSITDGME 595 (636)
Q Consensus 540 ~Dl~H~~~~fs~-------~~~~c~~~~~l~e~dRiLrPgG~~i~~-d~~~~~~~~~~~~~~~~ 595 (636)
||.|.+. |.. .+.|...+.+|-++-|+|||||.+++. |..+....+.+.+....
T Consensus 124 ~D~v~~~--~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~~~~~~~~~~~l~~~~ 185 (235)
T 3ckk_A 124 LTKMFFL--FPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITDVLELHDWMCTHFEEHP 185 (235)
T ss_dssp EEEEEEE--SCC-----------CCCHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHTST
T ss_pred eeEEEEe--CCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHHHHHCC
Confidence 9998752 321 122333468999999999999999985 66677777777665543
No 374
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=98.17 E-value=7.4e-07 Score=92.26 Aligned_cols=103 Identities=12% Similarity=0.024 Sum_probs=72.3
Q ss_pred cceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhhcc-------------cchhhccccccC---CC---C
Q 006662 477 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERGL-------------IGTYQNWCEAMS---TY---P 537 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRgl-------------i~~~~~~ce~~~---~y---p 537 (636)
..+|||+|||.|.++..|.+.+. -+|+.+|.++.++..+.++-- +..++.=++.+. .+ +
T Consensus 35 ~~~VLDlGcG~G~~~~~l~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 112 (313)
T 3bgv_A 35 DITVLDLGCGKGGDLLKWKKGRI--NKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQ 112 (313)
T ss_dssp CCEEEEETCTTTTTHHHHHHTTC--SEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTT
T ss_pred CCEEEEECCCCcHHHHHHHhcCC--CEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCC
Confidence 56899999999999999987653 366777887788888877621 112221122222 24 2
Q ss_pred CccceeeeccccccC-CCCcCHHHHHHHHhhcccCCcEEEEEeCH
Q 006662 538 RTYDLIHADSIFSLY-KDRCEMEDVLLEMDRILRPEGSVIIRDDV 581 (636)
Q Consensus 538 ~t~Dl~H~~~~fs~~-~~~c~~~~~l~e~dRiLrPgG~~i~~d~~ 581 (636)
.+||+|-+..++... .+.-+...+|.++-|+|||||.++++...
T Consensus 113 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 157 (313)
T 3bgv_A 113 MCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPN 157 (313)
T ss_dssp CCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred CCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCC
Confidence 599999987665432 33334578999999999999999998643
No 375
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.17 E-value=3.7e-06 Score=90.19 Aligned_cols=102 Identities=19% Similarity=0.219 Sum_probs=65.1
Q ss_pred CcEEEEeCCCCcHHHHHHhhc-------------------CCEEEEcCcCCchHHHHHHHH--H--------c----CCC
Q 006662 219 IRTAIDTGCGVASWGAYLMSR-------------------NILAVSFAPRDTHEAQVQFAL--E--------R----GVP 265 (636)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~-------------------~v~vv~i~p~Dis~a~l~~A~--e--------r----g~~ 265 (636)
..+|+|+|||+|..+..+... .+...|+...|.+.-...... + + +.-
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 468999999999888877321 122345555665433322221 0 0 011
Q ss_pred eEEEEec-cccCCCCCCCeeEEEecccccccccCh--------------------------------------HHHHHHH
Q 006662 266 ALIGVMA-SIRLPYPSRAFDMAHCSRCLIPWGQYD--------------------------------------GLYLIEV 306 (636)
Q Consensus 266 ~~~~~~d-~~~Lpf~~~sFDlV~~s~~L~h~~~d~--------------------------------------~~~L~el 306 (636)
....+.. ...-.||+++||+|+++.+| ||..+. ..+|+..
T Consensus 133 f~~gvpgSFy~rlfP~~S~d~v~Ss~aL-HWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~r 211 (374)
T 3b5i_A 133 FVAGVPGSFYRRLFPARTIDFFHSAFSL-HWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRAR 211 (374)
T ss_dssp EEEEEESCTTSCCSCTTCEEEEEEESCT-TBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecChhhhcccCCCcceEEEEeccee-eeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 1222222 23345889999999999999 886522 2468888
Q ss_pred HhcccCCcEEEEEeC
Q 006662 307 DRVLRPGGYWILSGP 321 (636)
Q Consensus 307 ~RvLKPGG~Liis~p 321 (636)
.+.|+|||.++++..
T Consensus 212 a~eL~pGG~mvl~~~ 226 (374)
T 3b5i_A 212 AAEVKRGGAMFLVCL 226 (374)
T ss_dssp HHHEEEEEEEEEEEE
T ss_pred HHHhCCCCEEEEEEe
Confidence 999999999999864
No 376
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=98.16 E-value=1.1e-06 Score=83.83 Aligned_cols=123 Identities=15% Similarity=0.156 Sum_probs=78.3
Q ss_pred chhhHHHHHHHHHHHHHhhhccCCCCCcceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhh----cc--c
Q 006662 450 FREDTALWKKRVTYYKSVDYQLAQPGRYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GL--I 523 (636)
Q Consensus 450 f~~d~~~w~~~v~~y~~~~~~l~~~~~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl--i 523 (636)
+...++...+.+-.+... ... ....+|||+|||+|.++.++++.+. -.|+.+|.++.++..+.++ |+ +
T Consensus 22 ~rp~~~~~~~~l~~~l~~---~~~-~~~~~vLDlgcG~G~~~~~~~~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~v 95 (189)
T 3p9n_A 22 TRPTTDRVRESLFNIVTA---RRD-LTGLAVLDLYAGSGALGLEALSRGA--ASVLFVESDQRSAAVIARNIEALGLSGA 95 (189)
T ss_dssp C---CHHHHHHHHHHHHH---HSC-CTTCEEEEETCTTCHHHHHHHHTTC--SEEEEEECCHHHHHHHHHHHHHHTCSCE
T ss_pred CccCcHHHHHHHHHHHHh---ccC-CCCCEEEEeCCCcCHHHHHHHHCCC--CeEEEEECCHHHHHHHHHHHHHcCCCce
Confidence 444455555555433321 111 2356899999999999997777653 2466667776788777664 43 2
Q ss_pred chhh-ccccccCCC-CCccceeeeccccccCCCCcCHHHHHHHHhh--cccCCcEEEEEeC
Q 006662 524 GTYQ-NWCEAMSTY-PRTYDLIHADSIFSLYKDRCEMEDVLLEMDR--ILRPEGSVIIRDD 580 (636)
Q Consensus 524 ~~~~-~~ce~~~~y-p~t~Dl~H~~~~fs~~~~~c~~~~~l~e~dR--iLrPgG~~i~~d~ 580 (636)
-+++ |+.+....+ +.+||+|-++..|... .-+.+.++.++.| +|+|||.+++...
T Consensus 96 ~~~~~d~~~~~~~~~~~~fD~i~~~~p~~~~--~~~~~~~l~~~~~~~~L~pgG~l~~~~~ 154 (189)
T 3p9n_A 96 TLRRGAVAAVVAAGTTSPVDLVLADPPYNVD--SADVDAILAALGTNGWTREGTVAVVERA 154 (189)
T ss_dssp EEEESCHHHHHHHCCSSCCSEEEECCCTTSC--HHHHHHHHHHHHHSSSCCTTCEEEEEEE
T ss_pred EEEEccHHHHHhhccCCCccEEEECCCCCcc--hhhHHHHHHHHHhcCccCCCeEEEEEec
Confidence 2333 322222224 4899999987665432 1356789999999 9999999999754
No 377
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=98.16 E-value=1.6e-06 Score=92.18 Aligned_cols=99 Identities=14% Similarity=0.291 Sum_probs=69.4
Q ss_pred CcceEeeecccchhhhhhhcCC--CeEEEEecCCCCCccchHHHHhh----cccchhhccc-cccC---CCCCccceeee
Q 006662 476 RYRNLLDMNAYLGGFAAALVDD--PLWVMNTVPVEAKINTLGVIYER----GLIGTYQNWC-EAMS---TYPRTYDLIHA 545 (636)
Q Consensus 476 ~~r~vlD~~~g~ggfaa~l~~~--~v~~mnv~~~~~~~~~l~~~~eR----gli~~~~~~c-e~~~---~yp~t~Dl~H~ 545 (636)
..++|||+|||.|.++.+|++. ++ .++..|. +.++..+.++ |+-+-+.--+ ..+. ++|.+||+|.+
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~~p~~---~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p~~~D~v~~ 254 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQYNKEV---EVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFPTGFDAVWM 254 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHHHSTTC---EEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCCCCCSEEEE
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCC---EEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCCCCCcCEEEE
Confidence 4689999999999999999763 33 3444555 3677777765 4422111111 2233 47889999999
Q ss_pred ccccccCCCCcCHHHHHHHHhhcccCCcEEEEEe
Q 006662 546 DSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRD 579 (636)
Q Consensus 546 ~~~fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d 579 (636)
..++..+.+. +...+|-++-|+|||||.++|.|
T Consensus 255 ~~vlh~~~~~-~~~~~l~~~~~~L~pgG~l~i~e 287 (363)
T 3dp7_A 255 SQFLDCFSEE-EVISILTRVAQSIGKDSKVYIME 287 (363)
T ss_dssp ESCSTTSCHH-HHHHHHHHHHHHCCTTCEEEEEE
T ss_pred echhhhCCHH-HHHHHHHHHHHhcCCCcEEEEEe
Confidence 8887655432 34588999999999999999975
No 378
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=98.16 E-value=1.1e-06 Score=92.38 Aligned_cols=97 Identities=18% Similarity=0.192 Sum_probs=68.6
Q ss_pred cceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhh----cc---cchhhccccccCCCC-Cccceeeeccc
Q 006662 477 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GL---IGTYQNWCEAMSTYP-RTYDLIHADSI 548 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl---i~~~~~~ce~~~~yp-~t~Dl~H~~~~ 548 (636)
..+|||+|||.|.++..+++.+. ..|+.+|.+ .++..+.++ |+ |-+++.-.+.+ .+| ..||+|.+..+
T Consensus 39 ~~~VLDiGcGtG~ls~~la~~g~--~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~-~~~~~~~D~Ivs~~~ 114 (328)
T 1g6q_1 39 DKIVLDVGCGTGILSMFAAKHGA--KHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDV-HLPFPKVDIIISEWM 114 (328)
T ss_dssp TCEEEEETCTTSHHHHHHHHTCC--SEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTS-CCSSSCEEEEEECCC
T ss_pred CCEEEEecCccHHHHHHHHHCCC--CEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhc-cCCCCcccEEEEeCc
Confidence 46899999999999999887753 245556666 566665554 54 23333111222 355 89999999776
Q ss_pred cccCCCCcCHHHHHHHHhhcccCCcEEEE
Q 006662 549 FSLYKDRCEMEDVLLEMDRILRPEGSVII 577 (636)
Q Consensus 549 fs~~~~~c~~~~~l~e~dRiLrPgG~~i~ 577 (636)
+......-.++.+|.+++|+|+|||.+|+
T Consensus 115 ~~~l~~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 115 GYFLLYESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp BTTBSTTCCHHHHHHHHHHHEEEEEEEES
T ss_pred hhhcccHHHHHHHHHHHHhhcCCCeEEEE
Confidence 55444555778999999999999999984
No 379
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=98.15 E-value=8e-07 Score=87.29 Aligned_cols=133 Identities=14% Similarity=0.122 Sum_probs=83.8
Q ss_pred cceEeeecccchhhhhhhcCC---CeEEEEecCCCCCccchHHHHhh----cc---cchhh-ccccccCCCC-----Ccc
Q 006662 477 YRNLLDMNAYLGGFAAALVDD---PLWVMNTVPVEAKINTLGVIYER----GL---IGTYQ-NWCEAMSTYP-----RTY 540 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~~---~v~~mnv~~~~~~~~~l~~~~eR----gl---i~~~~-~~ce~~~~yp-----~t~ 540 (636)
.++|||+|||.|.++.+|++. +. .|+.+|.++.++..+.++ |+ +-+++ |..+.+..++ .+|
T Consensus 59 ~~~vLdiG~G~G~~~~~la~~~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~f 135 (221)
T 3u81_A 59 PSLVLELGAYCGYSAVRMARLLQPGA---RLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTL 135 (221)
T ss_dssp CSEEEEECCTTSHHHHHHHTTSCTTC---EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCC
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCC---EEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCce
Confidence 578999999999999999873 32 455667766788777663 54 23332 3334444444 689
Q ss_pred ceeeeccccccCCCCcCHHHHHHHHhhcccCCcEEEEEeC-----HHHHHHHHHHHhcCCCceEEecc-CCCCCCcceEE
Q 006662 541 DLIHADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDD-----VDILVKIKSITDGMEWEGRIADH-ENGPRQREKIL 614 (636)
Q Consensus 541 Dl~H~~~~fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~-----~~~~~~~~~~~~~~~W~~~~~~~-e~~~~~~~~~l 614 (636)
|+|.+++....+. ....++.++ |+|||||.+++.|- .+++..++ ..=.++...+.. .......+.+.
T Consensus 136 D~V~~d~~~~~~~---~~~~~~~~~-~~LkpgG~lv~~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~~~~~~dG~~ 208 (221)
T 3u81_A 136 DMVFLDHWKDRYL---PDTLLLEKC-GLLRKGTVLLADNVIVPGTPDFLAYVR---GSSSFECTHYSSYLEYMKVVDGLE 208 (221)
T ss_dssp SEEEECSCGGGHH---HHHHHHHHT-TCCCTTCEEEESCCCCCCCHHHHHHHH---HCTTEEEEEEEEEETTTTEEEEEE
T ss_pred EEEEEcCCcccch---HHHHHHHhc-cccCCCeEEEEeCCCCcchHHHHHHHh---hCCCceEEEcccccccCCCCCceE
Confidence 9999876554432 123566677 99999999999753 23333333 334566654421 11122457888
Q ss_pred EEEec
Q 006662 615 FANKK 619 (636)
Q Consensus 615 ~~~K~ 619 (636)
+++++
T Consensus 209 ~~~~~ 213 (221)
T 3u81_A 209 KAIYQ 213 (221)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 88775
No 380
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=98.14 E-value=4.5e-06 Score=88.32 Aligned_cols=140 Identities=19% Similarity=0.187 Sum_probs=89.1
Q ss_pred CCcceEeeecccchhhhhhhcCC--CeEEEEecCCCCCccchHHHHhh----cccchhhccc-cccCCCCCccceeeecc
Q 006662 475 GRYRNLLDMNAYLGGFAAALVDD--PLWVMNTVPVEAKINTLGVIYER----GLIGTYQNWC-EAMSTYPRTYDLIHADS 547 (636)
Q Consensus 475 ~~~r~vlD~~~g~ggfaa~l~~~--~v~~mnv~~~~~~~~~l~~~~eR----gli~~~~~~c-e~~~~yp~t~Dl~H~~~ 547 (636)
....+|||+|||.|.++.+|.+. ++ .++.+|. +.++..+.++ |+-+-+.-.+ ..+...|..||+|.+.+
T Consensus 181 ~~~~~vlDvG~G~G~~~~~l~~~~~~~---~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~D~v~~~~ 256 (374)
T 1qzz_A 181 SAVRHVLDVGGGNGGMLAAIALRAPHL---RGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFKPLPVTADVVLLSF 256 (374)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHCTTC---EEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCCEEEEEEES
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCC---EEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCcCCCCCCEEEEec
Confidence 45689999999999999999765 23 3444555 4677776653 4421111111 22334676699999988
Q ss_pred ccccCCCCcCHHHHHHHHhhcccCCcEEEEEeC--H--H-----------------------HHHHHHHHHhcCCCceEE
Q 006662 548 IFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDD--V--D-----------------------ILVKIKSITDGMEWEGRI 600 (636)
Q Consensus 548 ~fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~--~--~-----------------------~~~~~~~~~~~~~W~~~~ 600 (636)
++-.+.+. ....+|-++-|+|||||+++|.|. . + ....++++++.-.++...
T Consensus 257 vl~~~~~~-~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~~~ 335 (374)
T 1qzz_A 257 VLLNWSDE-DALTILRGCVRALEPGGRLLVLDRADVEGDGADRFFSTLLDLRMLTFMGGRVRTRDEVVDLAGSAGLALAS 335 (374)
T ss_dssp CGGGSCHH-HHHHHHHHHHHHEEEEEEEEEEECCH-------HHHHHHHHHHHHHHHSCCCCCHHHHHHHHHTTTEEEEE
T ss_pred cccCCCHH-HHHHHHHHHHHhcCCCcEEEEEechhhcCCCCCcchhhhcchHHHHhCCCcCCCHHHHHHHHHHCCCceEE
Confidence 87654321 224899999999999999999876 2 1 234566677777776653
Q ss_pred eccCCCCC--CcceEEEEEec
Q 006662 601 ADHENGPR--QREKILFANKK 619 (636)
Q Consensus 601 ~~~e~~~~--~~~~~l~~~K~ 619 (636)
...-.+.. -...++.++|+
T Consensus 336 ~~~~~~~~~~~~~~~i~~~~~ 356 (374)
T 1qzz_A 336 ERTSGSTTLPFDFSILEFTAV 356 (374)
T ss_dssp EEEECCSSCSSCEEEEEEEEC
T ss_pred EEECCCCcccCCcEEEEEEEC
Confidence 32222211 11278888885
No 381
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=98.11 E-value=5.1e-06 Score=76.61 Aligned_cols=130 Identities=15% Similarity=0.169 Sum_probs=75.6
Q ss_pred cceEeeecccchhhhhhhcCC-----CeEEEEecCCCCCccchHHHHhhcccchhh-ccccccC------C-CC-Cccce
Q 006662 477 YRNLLDMNAYLGGFAAALVDD-----PLWVMNTVPVEAKINTLGVIYERGLIGTYQ-NWCEAMS------T-YP-RTYDL 542 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~~-----~v~~mnv~~~~~~~~~l~~~~eRgli~~~~-~~ce~~~------~-yp-~t~Dl 542 (636)
..+|||+|||.|.++.+|++. .|+.+-+.+ ++.. .. +...+ |+.+ .. . ++ .+||+
T Consensus 23 ~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~------~~~~---~~-~~~~~~d~~~-~~~~~~~~~~~~~~~~D~ 91 (180)
T 1ej0_A 23 GMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP------MDPI---VG-VDFLQGDFRD-ELVMKALLERVGDSKVQV 91 (180)
T ss_dssp TCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC------CCCC---TT-EEEEESCTTS-HHHHHHHHHHHTTCCEEE
T ss_pred CCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc------cccc---Cc-EEEEEccccc-chhhhhhhccCCCCceeE
Confidence 569999999999999998764 234433333 2211 11 12221 2221 11 0 44 78999
Q ss_pred eeeccccccCCCC-c-------CHHHHHHHHhhcccCCcEEEEEeCH-HHHHHHHHHHhcCCCceEE-ec-cCCCCCCcc
Q 006662 543 IHADSIFSLYKDR-C-------EMEDVLLEMDRILRPEGSVIIRDDV-DILVKIKSITDGMEWEGRI-AD-HENGPRQRE 611 (636)
Q Consensus 543 ~H~~~~fs~~~~~-c-------~~~~~l~e~dRiLrPgG~~i~~d~~-~~~~~~~~~~~~~~W~~~~-~~-~e~~~~~~~ 611 (636)
|.++..+...... - ....+|.++-|+|||||.+++.... .....+.+.++. .|+... .. ........|
T Consensus 92 i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 170 (180)
T 1ej0_A 92 VMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGEGFDEYLREIRS-LFTKVKVRKPDSSRARSRE 170 (180)
T ss_dssp EEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESSTTHHHHHHHHHH-HEEEEEEECCTTSCTTCCE
T ss_pred EEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecCCcHHHHHHHHHH-hhhhEEeecCCcccccCce
Confidence 9998877543221 0 0158899999999999999997432 223334444333 255432 22 222333568
Q ss_pred eEEEEEe
Q 006662 612 KILFANK 618 (636)
Q Consensus 612 ~~l~~~K 618 (636)
..+++++
T Consensus 171 ~~~~~~~ 177 (180)
T 1ej0_A 171 VYIVATG 177 (180)
T ss_dssp EEEEEEE
T ss_pred EEEEEcc
Confidence 8888876
No 382
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.11 E-value=5.1e-06 Score=84.59 Aligned_cols=83 Identities=13% Similarity=0.153 Sum_probs=65.6
Q ss_pred HHHHHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhcCCEEEEcCcCCchHHHHHHHHHcC---CCeEEEEeccccCCC
Q 006662 202 DAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALERG---VPALIGVMASIRLPY 278 (636)
Q Consensus 202 ~~~id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~~v~vv~i~p~Dis~a~l~~A~erg---~~~~~~~~d~~~Lpf 278 (636)
...++.+.+.+...++. +|||||||+|.++..|++++..++++ |+++.+++.++++. .++.+..+|...+++
T Consensus 15 ~~i~~~iv~~~~~~~~~--~VLEIG~G~G~lt~~La~~~~~V~av---Eid~~~~~~~~~~~~~~~~v~~i~~D~~~~~~ 89 (255)
T 3tqs_A 15 SFVLQKIVSAIHPQKTD--TLVEIGPGRGALTDYLLTECDNLALV---EIDRDLVAFLQKKYNQQKNITIYQNDALQFDF 89 (255)
T ss_dssp HHHHHHHHHHHCCCTTC--EEEEECCTTTTTHHHHTTTSSEEEEE---ECCHHHHHHHHHHHTTCTTEEEEESCTTTCCG
T ss_pred HHHHHHHHHhcCCCCcC--EEEEEcccccHHHHHHHHhCCEEEEE---ECCHHHHHHHHHHHhhCCCcEEEEcchHhCCH
Confidence 34566777777666655 99999999999999999998777777 88999999887653 468899999988876
Q ss_pred CC----CCeeEEEecc
Q 006662 279 PS----RAFDMAHCSR 290 (636)
Q Consensus 279 ~~----~sFDlV~~s~ 290 (636)
++ +.|| |+++.
T Consensus 90 ~~~~~~~~~~-vv~Nl 104 (255)
T 3tqs_A 90 SSVKTDKPLR-VVGNL 104 (255)
T ss_dssp GGSCCSSCEE-EEEEC
T ss_pred HHhccCCCeE-EEecC
Confidence 53 5688 66654
No 383
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=98.10 E-value=8.4e-06 Score=79.98 Aligned_cols=132 Identities=13% Similarity=0.066 Sum_probs=75.2
Q ss_pred CcceEeeecccchhhhhhhcCC--C-eEEEEecCCCCCccchHHHHhhc----ccchhh-cccc--ccCCCCCccceeee
Q 006662 476 RYRNLLDMNAYLGGFAAALVDD--P-LWVMNTVPVEAKINTLGVIYERG----LIGTYQ-NWCE--AMSTYPRTYDLIHA 545 (636)
Q Consensus 476 ~~r~vlD~~~g~ggfaa~l~~~--~-v~~mnv~~~~~~~~~l~~~~eRg----li~~~~-~~ce--~~~~yp~t~Dl~H~ 545 (636)
...+|||+|||.|.++.+|++. + - .|+.+|.++.++..+.++- -+-.++ |..+ .+...+.+||+|-+
T Consensus 73 ~~~~vLDlG~G~G~~~~~la~~~~~~~---~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~ 149 (227)
T 1g8a_A 73 PGKSVLYLGIASGTTASHVSDIVGWEG---KIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIFE 149 (227)
T ss_dssp TTCEEEEETTTSTTHHHHHHHHHCTTS---EEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEEEE
T ss_pred CCCEEEEEeccCCHHHHHHHHHhCCCe---EEEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcchhhcccCCceEEEE
Confidence 4568999999999999998754 1 2 3344455555555443321 122222 3222 11234578999887
Q ss_pred ccccccCCCCcCHHHHHHHHhhcccCCcEEEEEeCH---------H--HHHHHHHHHhcCCCceEE-eccCCCCC-Ccce
Q 006662 546 DSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDDV---------D--ILVKIKSITDGMEWEGRI-ADHENGPR-QREK 612 (636)
Q Consensus 546 ~~~fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~~---------~--~~~~~~~~~~~~~W~~~~-~~~e~~~~-~~~~ 612 (636)
+.. ..-....+|.++-|+|||||++++.-.. . .-..++++ ..- ++... .+.+ +. ...-
T Consensus 150 ~~~-----~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~l~~l-~~~-f~~~~~~~~~--~~~~~~~ 220 (227)
T 1g8a_A 150 DVA-----QPTQAKILIDNAEVYLKRGGYGMIAVKSRSIDVTKEPEQVFREVEREL-SEY-FEVIERLNLE--PYEKDHA 220 (227)
T ss_dssp CCC-----STTHHHHHHHHHHHHEEEEEEEEEEEEGGGTCTTSCHHHHHHHHHHHH-HTT-SEEEEEEECT--TTSSSEE
T ss_pred CCC-----CHhHHHHHHHHHHHhcCCCCEEEEEEecCCCCCCCChhhhhHHHHHHH-Hhh-ceeeeEeccC--cccCCCE
Confidence 543 1112235599999999999999995211 1 12455566 333 66542 2322 22 2345
Q ss_pred EEEEEec
Q 006662 613 ILFANKK 619 (636)
Q Consensus 613 ~l~~~K~ 619 (636)
+++++|+
T Consensus 221 ~~~~~~~ 227 (227)
T 1g8a_A 221 LFVVRKT 227 (227)
T ss_dssp EEEEECC
T ss_pred EEEEEeC
Confidence 6777763
No 384
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=98.09 E-value=1.3e-06 Score=85.00 Aligned_cols=99 Identities=12% Similarity=0.140 Sum_probs=69.5
Q ss_pred ceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhh----cc----cchhh-ccccccCCC-CCc-cceeeec
Q 006662 478 RNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GL----IGTYQ-NWCEAMSTY-PRT-YDLIHAD 546 (636)
Q Consensus 478 r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl----i~~~~-~~ce~~~~y-p~t-~Dl~H~~ 546 (636)
.+|||+|||+|.++..++.++. -.|+.+|.++.++..+.++ |+ +-+++ |..+..... +.+ ||+|-++
T Consensus 55 ~~vLDlGcGtG~~~~~~~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~ 132 (201)
T 2ift_A 55 SECLDGFAGSGSLGFEALSRQA--KKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFLD 132 (201)
T ss_dssp CEEEETTCTTCHHHHHHHHTTC--SEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEEC
T ss_pred CeEEEcCCccCHHHHHHHHccC--CEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEEC
Confidence 5899999999999998666643 3567778887888887764 33 22222 222222223 478 9999987
Q ss_pred cccccCCCCcCHHHHHHHH--hhcccCCcEEEEEeCHH
Q 006662 547 SIFSLYKDRCEMEDVLLEM--DRILRPEGSVIIRDDVD 582 (636)
Q Consensus 547 ~~fs~~~~~c~~~~~l~e~--dRiLrPgG~~i~~d~~~ 582 (636)
..|. .-..+.++-++ -|+|||||.+++.....
T Consensus 133 ~~~~----~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~ 166 (201)
T 2ift_A 133 PPFH----FNLAEQAISLLCENNWLKPNALIYVETEKD 166 (201)
T ss_dssp CCSS----SCHHHHHHHHHHHTTCEEEEEEEEEEEESS
T ss_pred CCCC----CccHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 7754 23467888888 78999999999976543
No 385
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=98.08 E-value=6.8e-07 Score=82.98 Aligned_cols=97 Identities=12% Similarity=0.158 Sum_probs=66.6
Q ss_pred cceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhh----cc-cchhh-ccccccCCCC---Cccceeeecc
Q 006662 477 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GL-IGTYQ-NWCEAMSTYP---RTYDLIHADS 547 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl-i~~~~-~~ce~~~~yp---~t~Dl~H~~~ 547 (636)
..+|||+|||.|.++.+|++... +|+.+|.++.++..+.++ |+ +-+++ |+.+.....+ .+||+|.++.
T Consensus 42 ~~~vLD~GcG~G~~~~~l~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~i~~~~ 118 (171)
T 1ws6_A 42 RGRFLDPFAGSGAVGLEAASEGW---EAVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGERFTVAFMAP 118 (171)
T ss_dssp CCEEEEETCSSCHHHHHHHHTTC---EEEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCCEEEEEECC
T ss_pred CCeEEEeCCCcCHHHHHHHHCCC---eEEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHhhhccCCceEEEEECC
Confidence 46899999999999999988754 277778877788777654 32 22222 3222222222 3799999988
Q ss_pred ccccCCCCcCHHHHHHHHh--hcccCCcEEEEEeCH
Q 006662 548 IFSLYKDRCEMEDVLLEMD--RILRPEGSVIIRDDV 581 (636)
Q Consensus 548 ~fs~~~~~c~~~~~l~e~d--RiLrPgG~~i~~d~~ 581 (636)
.|. . ..+.++.++- |+|+|||.+++....
T Consensus 119 ~~~--~---~~~~~~~~~~~~~~L~~gG~~~~~~~~ 149 (171)
T 1ws6_A 119 PYA--M---DLAALFGELLASGLVEAGGLYVLQHPK 149 (171)
T ss_dssp CTT--S---CTTHHHHHHHHHTCEEEEEEEEEEEET
T ss_pred CCc--h---hHHHHHHHHHhhcccCCCcEEEEEeCC
Confidence 776 2 3355666666 999999999997543
No 386
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=98.08 E-value=4.2e-06 Score=87.37 Aligned_cols=139 Identities=16% Similarity=0.171 Sum_probs=89.2
Q ss_pred ccCCCCCcceEeeecccchhhhhhhcCC--CeEEEEecCCCCCccchHHHHhh----cccchhhccc-cccCCCCCccce
Q 006662 470 QLAQPGRYRNLLDMNAYLGGFAAALVDD--PLWVMNTVPVEAKINTLGVIYER----GLIGTYQNWC-EAMSTYPRTYDL 542 (636)
Q Consensus 470 ~l~~~~~~r~vlD~~~g~ggfaa~l~~~--~v~~mnv~~~~~~~~~l~~~~eR----gli~~~~~~c-e~~~~yp~t~Dl 542 (636)
.+.. ....+|||+|||.|.++.+|++. ++ .++..|. +.++..+.++ |+-+-+.-.+ ..+.++|..||+
T Consensus 164 ~~~~-~~~~~vlDvG~G~G~~~~~l~~~~p~~---~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~p~~~D~ 238 (332)
T 3i53_A 164 KYDW-AALGHVVDVGGGSGGLLSALLTAHEDL---SGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFFDPLPAGAGG 238 (332)
T ss_dssp SSCC-GGGSEEEEETCTTSHHHHHHHHHCTTC---EEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCSCSE
T ss_pred hCCC-CCCCEEEEeCCChhHHHHHHHHHCCCC---eEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCCCCCCCCCcE
Confidence 3444 56789999999999999999763 32 2233355 4677766654 5422111111 223566778999
Q ss_pred eeeccccccCCCCcCHHHHHHHHhhcccCCcEEEEEeCH----------H------------HHHHHHHHHhcCCCceEE
Q 006662 543 IHADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDDV----------D------------ILVKIKSITDGMEWEGRI 600 (636)
Q Consensus 543 ~H~~~~fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~~----------~------------~~~~~~~~~~~~~W~~~~ 600 (636)
|.+..++-.+.+. ....+|-++-|+|||||+++|.|.. + ....++++++.-.++..-
T Consensus 239 v~~~~vlh~~~~~-~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~ 317 (332)
T 3i53_A 239 YVLSAVLHDWDDL-SAVAILRRCAEAAGSGGVVLVIEAVAGDEHAGTGMDLRMLTYFGGKERSLAELGELAAQAGLAVRA 317 (332)
T ss_dssp EEEESCGGGSCHH-HHHHHHHHHHHHHTTTCEEEEEECCCC---CCHHHHHHHHHHHSCCCCCHHHHHHHHHHTTEEEEE
T ss_pred EEEehhhccCCHH-HHHHHHHHHHHhcCCCCEEEEEeecCCCCCccHHHHHHHHhhCCCCCCCHHHHHHHHHHCCCEEEE
Confidence 9998887655432 3468999999999999999997641 0 134566666666666553
Q ss_pred eccCCCCCCcceEEEEEe
Q 006662 601 ADHENGPRQREKILFANK 618 (636)
Q Consensus 601 ~~~e~~~~~~~~~l~~~K 618 (636)
...-. + ..|+.++|
T Consensus 318 ~~~~~-~---~~vie~r~ 331 (332)
T 3i53_A 318 AHPIS-Y---VSIVEMTA 331 (332)
T ss_dssp EEECS-S---SEEEEEEE
T ss_pred EEECC-C---cEEEEEee
Confidence 32221 1 56777765
No 387
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=98.08 E-value=4.5e-06 Score=87.01 Aligned_cols=105 Identities=15% Similarity=0.226 Sum_probs=71.4
Q ss_pred hhhccCCCCCcceEeeecccchhhhhhhcCC-CeEEEEecCCCCCccchHHHHhh----cc---cchhhccccccCCCCC
Q 006662 467 VDYQLAQPGRYRNLLDMNAYLGGFAAALVDD-PLWVMNTVPVEAKINTLGVIYER----GL---IGTYQNWCEAMSTYPR 538 (636)
Q Consensus 467 ~~~~l~~~~~~r~vlD~~~g~ggfaa~l~~~-~v~~mnv~~~~~~~~~l~~~~eR----gl---i~~~~~~ce~~~~yp~ 538 (636)
++..+.. .. .+|||+|||.|.++.+|++. |- ..++..|. +.++..+.++ |+ +.... ...+..+|.
T Consensus 160 ~~~~~~~-~~-~~vlDvG~G~G~~~~~l~~~~p~--~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~--~d~~~~~~~ 232 (334)
T 2ip2_A 160 IPRLLDF-RG-RSFVDVGGGSGELTKAILQAEPS--ARGVMLDR-EGSLGVARDNLSSLLAGERVSLVG--GDMLQEVPS 232 (334)
T ss_dssp HHHHSCC-TT-CEEEEETCTTCHHHHHHHHHCTT--CEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEE--SCTTTCCCS
T ss_pred HHHhCCC-CC-CEEEEeCCCchHHHHHHHHHCCC--CEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEec--CCCCCCCCC
Confidence 3333444 44 89999999999999999764 21 13444555 4677776654 33 22221 122335678
Q ss_pred ccceeeeccccccCCCCcCHHHHHHHHhhcccCCcEEEEEe
Q 006662 539 TYDLIHADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRD 579 (636)
Q Consensus 539 t~Dl~H~~~~fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d 579 (636)
.||+|.+..++..+.+. ....+|-++-|+|+|||+++|.|
T Consensus 233 ~~D~v~~~~vl~~~~~~-~~~~~l~~~~~~L~pgG~l~i~e 272 (334)
T 2ip2_A 233 NGDIYLLSRIIGDLDEA-ASLRLLGNCREAMAGDGRVVVIE 272 (334)
T ss_dssp SCSEEEEESCGGGCCHH-HHHHHHHHHHHHSCTTCEEEEEE
T ss_pred CCCEEEEchhccCCCHH-HHHHHHHHHHHhcCCCCEEEEEE
Confidence 89999998888655322 33589999999999999999985
No 388
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=98.08 E-value=3.9e-06 Score=85.44 Aligned_cols=111 Identities=11% Similarity=0.059 Sum_probs=76.4
Q ss_pred CCcceEeeecccchhhhhhhcCC--CeEEEEecCCCCCccchHHHHhh-----cc--cchhh-ccccccCCCC-Ccccee
Q 006662 475 GRYRNLLDMNAYLGGFAAALVDD--PLWVMNTVPVEAKINTLGVIYER-----GL--IGTYQ-NWCEAMSTYP-RTYDLI 543 (636)
Q Consensus 475 ~~~r~vlD~~~g~ggfaa~l~~~--~v~~mnv~~~~~~~~~l~~~~eR-----gl--i~~~~-~~ce~~~~yp-~t~Dl~ 543 (636)
....+|||+|||.|+++..|++. +- ..|+.+|.++..+..+.++ |+ +-+++ |.. ..+| .+||+|
T Consensus 109 ~~~~~VLD~G~G~G~~~~~la~~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~---~~~~~~~fD~V 183 (275)
T 1yb2_A 109 RPGMDILEVGVGSGNMSSYILYALNGK--GTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIA---DFISDQMYDAV 183 (275)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHTTS--SEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTT---TCCCSCCEEEE
T ss_pred CCcCEEEEecCCCCHHHHHHHHHcCCC--CEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchh---ccCcCCCccEE
Confidence 44679999999999999999765 21 2456667776788877766 53 22222 322 2344 689998
Q ss_pred eeccccccCCCCcCHHHHHHHHhhcccCCcEEEEEeCHH-HHHHHHHHHhcCCCce
Q 006662 544 HADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDDVD-ILVKIKSITDGMEWEG 598 (636)
Q Consensus 544 H~~~~fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~~~-~~~~~~~~~~~~~W~~ 598 (636)
-+ +--+...+|-++-|+|||||.+++.+... ....+.+.++...|..
T Consensus 184 i~--------~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~l~~~Gf~~ 231 (275)
T 1yb2_A 184 IA--------DIPDPWNHVQKIASMMKPGSVATFYLPNFDQSEKTVLSLSASGMHH 231 (275)
T ss_dssp EE--------CCSCGGGSHHHHHHTEEEEEEEEEEESSHHHHHHHHHHSGGGTEEE
T ss_pred EE--------cCcCHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCeE
Confidence 77 22344689999999999999999987543 5566666655555543
No 389
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.08 E-value=8.4e-06 Score=86.92 Aligned_cols=101 Identities=12% Similarity=0.081 Sum_probs=71.0
Q ss_pred CCCcEEEEeCCCCcHHHHHHhhcCC-EEEEcCcCCchHHHHHHHHHcCC-------------CeEEEEeccccCCC----
Q 006662 217 GSIRTAIDTGCGVASWGAYLMSRNI-LAVSFAPRDTHEAQVQFALERGV-------------PALIGVMASIRLPY---- 278 (636)
Q Consensus 217 g~~r~VLDIGCGtG~~a~~La~~~v-~vv~i~p~Dis~a~l~~A~erg~-------------~~~~~~~d~~~Lpf---- 278 (636)
..+++|||||||+|.++.++++++. .++.+ |+++.+++.|++... .+.+...|....--
T Consensus 187 p~pkrVL~IGgG~G~~arellk~~~~~Vt~V---EID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~ 263 (364)
T 2qfm_A 187 YTGKDVLILGGGDGGILCEIVKLKPKMVTMV---EIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAK 263 (364)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTCCSEEEEE---ESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHH
T ss_pred CCCCEEEEEECChhHHHHHHHHCCCCEEEEE---ECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhc
Confidence 3467999999999999999998753 33334 889999999987632 36677777654321
Q ss_pred CCCCeeEEEeccccccccc-----ChHHHHHHH----HhcccCCcEEEEEe
Q 006662 279 PSRAFDMAHCSRCLIPWGQ-----YDGLYLIEV----DRVLRPGGYWILSG 320 (636)
Q Consensus 279 ~~~sFDlV~~s~~L~h~~~-----d~~~~L~el----~RvLKPGG~Liis~ 320 (636)
..++||+|++-..-.+... ....+++.+ .++|+|||.+++..
T Consensus 264 ~~~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs 314 (364)
T 2qfm_A 264 EGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQG 314 (364)
T ss_dssp HTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred cCCCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEc
Confidence 3578999998542212211 114666666 89999999999975
No 390
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=98.07 E-value=4.9e-06 Score=86.44 Aligned_cols=137 Identities=20% Similarity=0.283 Sum_probs=89.0
Q ss_pred CcceEeeecccchhhhhhhcCC-CeEEEEecCCCCCccchHHHHhh----cccchhhcccccc-C-CCCCccceeeeccc
Q 006662 476 RYRNLLDMNAYLGGFAAALVDD-PLWVMNTVPVEAKINTLGVIYER----GLIGTYQNWCEAM-S-TYPRTYDLIHADSI 548 (636)
Q Consensus 476 ~~r~vlD~~~g~ggfaa~l~~~-~v~~mnv~~~~~~~~~l~~~~eR----gli~~~~~~ce~~-~-~yp~t~Dl~H~~~~ 548 (636)
...+|||+|||.|.++.+|.+. +- ..++.+|.+ .++..+.++ |+-+-+.-.+..+ . .+|..||+|.+.++
T Consensus 165 ~~~~vlDvG~G~G~~~~~l~~~~p~--~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~v~~~~~ 241 (335)
T 2r3s_A 165 EPLKVLDISASHGLFGIAVAQHNPN--AEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEVDYGNDYDLVLLPNF 241 (335)
T ss_dssp CCSEEEEETCTTCHHHHHHHHHCTT--CEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTSCCCSCEEEEEEESC
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCC--CeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccCCCCCCCcEEEEcch
Confidence 3579999999999999999865 21 255666777 777777665 4422111111222 2 45666999999888
Q ss_pred cccCCCCcCHHHHHHHHhhcccCCcEEEEEeCHH---------------------------HHHHHHHHHhcCCCceEEe
Q 006662 549 FSLYKDRCEMEDVLLEMDRILRPEGSVIIRDDVD---------------------------ILVKIKSITDGMEWEGRIA 601 (636)
Q Consensus 549 fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~~~---------------------------~~~~~~~~~~~~~W~~~~~ 601 (636)
+..... -+...+|-++-|+|+|||+++|.|... ....++++++.-.++..-.
T Consensus 242 l~~~~~-~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ll~~aGf~~~~~ 320 (335)
T 2r3s_A 242 LHHFDV-ATCEQLLRKIKTALAVEGKVIVFDFIPNSDRITPPDAAAFSLVMLATTPNGDAYTFAEYESMFSNAGFSHSQL 320 (335)
T ss_dssp GGGSCH-HHHHHHHHHHHHHEEEEEEEEEEECCCCTTSSCSHHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHTTCSEEEE
T ss_pred hccCCH-HHHHHHHHHHHHhCCCCcEEEEEeecCCCCcCCchHHHHHHHHHHeeCCCCCcCCHHHHHHHHHHCCCCeeeE
Confidence 765422 234689999999999999999975210 1456667777777765543
Q ss_pred ccCCCCCCcceEEEEEec
Q 006662 602 DHENGPRQREKILFANKK 619 (636)
Q Consensus 602 ~~e~~~~~~~~~l~~~K~ 619 (636)
..-.+ ...+++++++
T Consensus 321 ~~~~~---~~~~i~~~~~ 335 (335)
T 2r3s_A 321 HSLPT---TQQQVIVAYK 335 (335)
T ss_dssp ECCTT---SSSEEEEEEC
T ss_pred EECCC---CceeEEEecC
Confidence 22222 3467777664
No 391
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=98.06 E-value=1.7e-06 Score=83.74 Aligned_cols=94 Identities=14% Similarity=0.056 Sum_probs=66.2
Q ss_pred CCcceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhh----cc--cchhh-ccccccCCCCCccceeeecc
Q 006662 475 GRYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GL--IGTYQ-NWCEAMSTYPRTYDLIHADS 547 (636)
Q Consensus 475 ~~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl--i~~~~-~~ce~~~~yp~t~Dl~H~~~ 547 (636)
....+|||+|||.|.++..|++.. -+|+.+|.++..+..+.++ |+ +.+.+ |..+.. .-+.+||+|.+++
T Consensus 76 ~~~~~vLdiG~G~G~~~~~la~~~---~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-~~~~~~D~i~~~~ 151 (210)
T 3lbf_A 76 TPQSRVLEIGTGSGYQTAILAHLV---QHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGW-QARAPFDAIIVTA 151 (210)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHS---SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCC-GGGCCEEEEEESS
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhC---CEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCC-ccCCCccEEEEcc
Confidence 346789999999999999998873 3566667777788887765 43 22222 222211 1137899999987
Q ss_pred ccccCCCCcCHHHHHHHHhhcccCCcEEEEEeCH
Q 006662 548 IFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDDV 581 (636)
Q Consensus 548 ~fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~~ 581 (636)
.+..... ++-|+|||||.+++.-..
T Consensus 152 ~~~~~~~---------~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 152 APPEIPT---------ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp BCSSCCT---------HHHHTEEEEEEEEEEECS
T ss_pred chhhhhH---------HHHHhcccCcEEEEEEcC
Confidence 7754432 688999999999997543
No 392
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=98.06 E-value=9.8e-06 Score=80.60 Aligned_cols=109 Identities=16% Similarity=0.112 Sum_probs=75.6
Q ss_pred CcceEeeecccchhhhhhhcCC---CeEEEEecCCCCCccchHHHHhh-----cc--cchhh-ccccccCCCC-Ccccee
Q 006662 476 RYRNLLDMNAYLGGFAAALVDD---PLWVMNTVPVEAKINTLGVIYER-----GL--IGTYQ-NWCEAMSTYP-RTYDLI 543 (636)
Q Consensus 476 ~~r~vlD~~~g~ggfaa~l~~~---~v~~mnv~~~~~~~~~l~~~~eR-----gl--i~~~~-~~ce~~~~yp-~t~Dl~ 543 (636)
...+|||+|||.|.++.+|++. .. +|+.+|.++..+..+.++ |. +-+.+ |..+. ++| .+||+|
T Consensus 96 ~~~~vLdiG~G~G~~~~~l~~~~~~~~---~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~--~~~~~~~D~v 170 (258)
T 2pwy_A 96 PGMRVLEAGTGSGGLTLFLARAVGEKG---LVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEA--ELEEAAYDGV 170 (258)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTS---EEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGC--CCCTTCEEEE
T ss_pred CCCEEEEECCCcCHHHHHHHHHhCCCC---EEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhc--CCCCCCcCEE
Confidence 3679999999999999998765 22 455556666788887776 52 22222 33322 255 789998
Q ss_pred eeccccccCCCCcCHHHHHHHHhhcccCCcEEEEEeCH-HHHHHHHHHHhcCCCc
Q 006662 544 HADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDDV-DILVKIKSITDGMEWE 597 (636)
Q Consensus 544 H~~~~fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~~-~~~~~~~~~~~~~~W~ 597 (636)
-++ --+...+|-++.|+|+|||.+++.... +.+.++.+.++...|.
T Consensus 171 ~~~--------~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~gf~ 217 (258)
T 2pwy_A 171 ALD--------LMEPWKVLEKAALALKPDRFLVAYLPNITQVLELVRAAEAHPFR 217 (258)
T ss_dssp EEE--------SSCGGGGHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHTTTTEE
T ss_pred EEC--------CcCHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCc
Confidence 872 224458899999999999999998764 3556666666666554
No 393
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.06 E-value=1.5e-05 Score=81.77 Aligned_cols=120 Identities=17% Similarity=0.145 Sum_probs=69.6
Q ss_pred cccHHHHHHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhc-CC---EEEEcCcCCchHHHHHHHHHcCCCeEEEEecc
Q 006662 198 PRGADAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR-NI---LAVSFAPRDTHEAQVQFALERGVPALIGVMAS 273 (636)
Q Consensus 198 ~~g~~~~id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~-~v---~vv~i~p~Dis~a~l~~A~erg~~~~~~~~d~ 273 (636)
...+...+.++.+...+.++. +|||+|||+|.|+.+++++ ++ .++++. .|+....+.. ...+.++.....+.
T Consensus 56 rSRaA~KL~ei~ek~~l~~~~--~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVG-vDl~~~pi~~-~~~g~~ii~~~~~~ 131 (277)
T 3evf_A 56 VSRGTAKLRWFHERGYVKLEG--RVIDLGCGRGGWCYYAAAQKEVSGVKGFTLG-RDGHEKPMNV-QSLGWNIITFKDKT 131 (277)
T ss_dssp SSTHHHHHHHHHHTTSSCCCE--EEEEETCTTCHHHHHHHTSTTEEEEEEECCC-CTTCCCCCCC-CBTTGGGEEEECSC
T ss_pred cccHHHHHHHHHHhCCCCCCC--EEEEecCCCCHHHHHHHHhcCCCcceeEEEe-ccCccccccc-CcCCCCeEEEeccc
Confidence 333333444444444344444 8999999999999998876 32 222222 2321110000 00122334444444
Q ss_pred ccCCCCCCCeeEEEeccccc---ccccChH--HHHHHHHhcccCC-cEEEEEeC
Q 006662 274 IRLPYPSRAFDMAHCSRCLI---PWGQYDG--LYLIEVDRVLRPG-GYWILSGP 321 (636)
Q Consensus 274 ~~Lpf~~~sFDlV~~s~~L~---h~~~d~~--~~L~el~RvLKPG-G~Liis~p 321 (636)
....++.+.||+|+|..+.. ++.+... .+|..+.++|+|| |.|++...
T Consensus 132 dv~~l~~~~~DlVlsD~apnsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf 185 (277)
T 3evf_A 132 DIHRLEPVKCDTLLCDIGESSSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVL 185 (277)
T ss_dssp CTTTSCCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEES
T ss_pred eehhcCCCCccEEEecCccCcCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEec
Confidence 55567788999999976552 1222211 3568889999999 99999865
No 394
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=98.06 E-value=1.1e-05 Score=81.67 Aligned_cols=121 Identities=11% Similarity=0.086 Sum_probs=80.9
Q ss_pred CcceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhh-------cc---cchhh-ccccccC-----CC-CC
Q 006662 476 RYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER-------GL---IGTYQ-NWCEAMS-----TY-PR 538 (636)
Q Consensus 476 ~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR-------gl---i~~~~-~~ce~~~-----~y-p~ 538 (636)
...+|||+|||.|.++..|+++.- ..+|+.+|.++.++..+.++ |+ +-+++ |..+... .+ +.
T Consensus 36 ~~~~VLDlG~G~G~~~l~la~~~~-~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~ 114 (260)
T 2ozv_A 36 RACRIADLGAGAGAAGMAVAARLE-KAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPDE 114 (260)
T ss_dssp SCEEEEECCSSSSHHHHHHHHHCT-TEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCTT
T ss_pred CCCEEEEeCChHhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCCC
Confidence 356899999999999998876520 14667777776777777653 33 22333 2222111 23 37
Q ss_pred ccceeeecccccc---------------CCCCcCHHHHHHHHhhcccCCcEEEEEeCHHHHHHHHHHHhcCCCce
Q 006662 539 TYDLIHADSIFSL---------------YKDRCEMEDVLLEMDRILRPEGSVIIRDDVDILVKIKSITDGMEWEG 598 (636)
Q Consensus 539 t~Dl~H~~~~fs~---------------~~~~c~~~~~l~e~dRiLrPgG~~i~~d~~~~~~~~~~~~~~~~W~~ 598 (636)
+||+|-++--|.. +...+.++.++-++-|+|+|||.+++--..+.+..+.+.++.- |..
T Consensus 115 ~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~~~-~~~ 188 (260)
T 2ozv_A 115 HFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISRPQSVAEIIAACGSR-FGG 188 (260)
T ss_dssp CEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEECGGGHHHHHHHHTTT-EEE
T ss_pred CcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEcHHHHHHHHHHHHhc-CCc
Confidence 8999999744322 1234668899999999999999999987777777777777664 653
No 395
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.06 E-value=2.1e-05 Score=83.85 Aligned_cols=107 Identities=8% Similarity=-0.032 Sum_probs=73.0
Q ss_pred HHHHHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhcCCEEEEcCcCCchHHHHHHHHHc----CC-CeEEEEeccccC
Q 006662 202 DAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALER----GV-PALIGVMASIRL 276 (636)
Q Consensus 202 ~~~id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~~v~vv~i~p~Dis~a~l~~A~er----g~-~~~~~~~d~~~L 276 (636)
..+++.+.+.+... + .+|||+|||+|.++..+++....++++ |+++.+++.|+++ +. ++.+..+|...+
T Consensus 200 ~~l~~~~~~~~~~~-~--~~vLDl~cG~G~~~l~la~~~~~V~gv---d~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~ 273 (369)
T 3bt7_A 200 IQMLEWALDVTKGS-K--GDLLELYCGNGNFSLALARNFDRVLAT---EIAKPSVAAAQYNIAANHIDNVQIIRMAAEEF 273 (369)
T ss_dssp HHHHHHHHHHTTTC-C--SEEEEESCTTSHHHHHHGGGSSEEEEE---CCCHHHHHHHHHHHHHTTCCSEEEECCCSHHH
T ss_pred HHHHHHHHHHhhcC-C--CEEEEccCCCCHHHHHHHhcCCEEEEE---ECCHHHHHHHHHHHHHcCCCceEEEECCHHHH
Confidence 34444555554332 2 479999999999999999876667777 8899998887643 43 578888776553
Q ss_pred C--CCC--------------CCeeEEEecccccccccChHHHHHHHHhcccCCcEEEEEeC
Q 006662 277 P--YPS--------------RAFDMAHCSRCLIPWGQYDGLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 277 p--f~~--------------~sFDlV~~s~~L~h~~~d~~~~L~el~RvLKPGG~Liis~p 321 (636)
. +.. .+||+|++..-.. .+..++.+.|+++|.+++...
T Consensus 274 ~~~~~~~~~~~~l~~~~~~~~~fD~Vv~dPPr~-------g~~~~~~~~l~~~g~ivyvsc 327 (369)
T 3bt7_A 274 TQAMNGVREFNRLQGIDLKSYQCETIFVDPPRS-------GLDSETEKMVQAYPRILYISC 327 (369)
T ss_dssp HHHHSSCCCCTTGGGSCGGGCCEEEEEECCCTT-------CCCHHHHHHHTTSSEEEEEES
T ss_pred HHHHhhccccccccccccccCCCCEEEECcCcc-------ccHHHHHHHHhCCCEEEEEEC
Confidence 1 121 3799998754221 233567777788888888753
No 396
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=98.04 E-value=2.4e-06 Score=85.49 Aligned_cols=117 Identities=16% Similarity=0.178 Sum_probs=74.6
Q ss_pred cceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhh------------cc--cchhh-ccccccCC-CC-Cc
Q 006662 477 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER------------GL--IGTYQ-NWCEAMST-YP-RT 539 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR------------gl--i~~~~-~~ce~~~~-yp-~t 539 (636)
...|||+|||.|+|+.+|++..- -.+|+.+|.+..++..+.++ |+ +-+++ |..+.+.. ++ .+
T Consensus 50 ~~~vLDiGcG~G~~~~~la~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~~ 128 (246)
T 2vdv_E 50 KVTIADIGCGFGGLMIDLSPAFP-EDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKGQ 128 (246)
T ss_dssp CEEEEEETCTTSHHHHHHHHHST-TSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTTC
T ss_pred CCEEEEEcCCCCHHHHHHHHhCC-CCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhccccc
Confidence 56899999999999999976521 13566777776787777654 55 22222 22222222 44 67
Q ss_pred cceeeeccccccC-------CCCcCHHHHHHHHhhcccCCcEEEE-EeCHHHHHHHHHHHhcCCC
Q 006662 540 YDLIHADSIFSLY-------KDRCEMEDVLLEMDRILRPEGSVII-RDDVDILVKIKSITDGMEW 596 (636)
Q Consensus 540 ~Dl~H~~~~fs~~-------~~~c~~~~~l~e~dRiLrPgG~~i~-~d~~~~~~~~~~~~~~~~W 596 (636)
+|.|.. .|+.- +.|-..+.+|.++.|+|+|||.+++ +|..+..+.+.+.+....+
T Consensus 129 ~d~v~~--~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~~~ 191 (246)
T 2vdv_E 129 LSKMFF--CFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTITDVKDLHEWMVKHLEEHPL 191 (246)
T ss_dssp EEEEEE--ESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHHSTT
T ss_pred cCEEEE--ECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEeccHHHHHHHHHHHHhCcC
Confidence 887653 12211 1122226899999999999999998 5776666667666555443
No 397
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=98.04 E-value=2.6e-06 Score=84.75 Aligned_cols=98 Identities=14% Similarity=0.049 Sum_probs=58.6
Q ss_pred cceEeeecccchhhhhhhcCC-CeEEEEecCCCCC-ccchHHH---H----hhcccchhhccccccCCCC----Ccccee
Q 006662 477 YRNLLDMNAYLGGFAAALVDD-PLWVMNTVPVEAK-INTLGVI---Y----ERGLIGTYQNWCEAMSTYP----RTYDLI 543 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~~-~v~~mnv~~~~~~-~~~l~~~---~----eRgli~~~~~~ce~~~~yp----~t~Dl~ 543 (636)
...|||+|||.|.++.+|++. +- .+|+.+|.+ +.+++++ . ++|+..+. -.+.....+| ..+|.+
T Consensus 25 ~~~vLDiGCG~G~~~~~la~~~~~--~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~-~~~~d~~~l~~~~~d~v~~i 101 (225)
T 3p2e_A 25 DRVHIDLGTGDGRNIYKLAINDQN--TFYIGIDPVKENLFDISKKIIKKPSKGGLSNVV-FVIAAAESLPFELKNIADSI 101 (225)
T ss_dssp SEEEEEETCTTSHHHHHHHHTCTT--EEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEE-EECCBTTBCCGGGTTCEEEE
T ss_pred CCEEEEEeccCcHHHHHHHHhCCC--CEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeE-EEEcCHHHhhhhccCeEEEE
Confidence 578999999999999999832 22 356777777 5666665 3 33552211 1112223334 334444
Q ss_pred eecccccc--CCCCcCHHHHHHHHhhcccCCcEEEE
Q 006662 544 HADSIFSL--YKDRCEMEDVLLEMDRILRPEGSVII 577 (636)
Q Consensus 544 H~~~~fs~--~~~~c~~~~~l~e~dRiLrPgG~~i~ 577 (636)
+++-.+.. ...+-+.+.+|.|+-|+|||||.++|
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i 137 (225)
T 3p2e_A 102 SILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEF 137 (225)
T ss_dssp EEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEE
T ss_pred EEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEE
Confidence 44211110 01112235789999999999999999
No 398
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=98.04 E-value=1.9e-06 Score=81.20 Aligned_cols=99 Identities=21% Similarity=0.285 Sum_probs=67.5
Q ss_pred cceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhh----cc---cchhh-ccccccCCC---CCccceeee
Q 006662 477 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GL---IGTYQ-NWCEAMSTY---PRTYDLIHA 545 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl---i~~~~-~~ce~~~~y---p~t~Dl~H~ 545 (636)
..+|||+|||.|.++.++++.+. .+|+.+|.++.++..+.++ |+ +-+++ |+.+..... +.+||+|-+
T Consensus 45 ~~~vLD~GcG~G~~~~~~~~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~ 122 (187)
T 2fhp_A 45 GGMALDLYSGSGGLAIEAVSRGM--DKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDLVLL 122 (187)
T ss_dssp SCEEEETTCTTCHHHHHHHHTTC--SEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCEEEeCCccCHHHHHHHHcCC--CEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCEEEE
Confidence 56899999999999998877653 3566667766777766543 33 22333 433322222 478999998
Q ss_pred ccccccCCCCcCHHHHHHHH--hhcccCCcEEEEEeCH
Q 006662 546 DSIFSLYKDRCEMEDVLLEM--DRILRPEGSVIIRDDV 581 (636)
Q Consensus 546 ~~~fs~~~~~c~~~~~l~e~--dRiLrPgG~~i~~d~~ 581 (636)
+..|.. -..+.++.++ .|+|+|||.+++....
T Consensus 123 ~~~~~~----~~~~~~~~~l~~~~~L~~gG~l~~~~~~ 156 (187)
T 2fhp_A 123 DPPYAK----QEIVSQLEKMLERQLLTNEAVIVCETDK 156 (187)
T ss_dssp CCCGGG----CCHHHHHHHHHHTTCEEEEEEEEEEEET
T ss_pred CCCCCc----hhHHHHHHHHHHhcccCCCCEEEEEeCC
Confidence 777541 2446666666 9999999999997543
No 399
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.04 E-value=1.7e-06 Score=88.45 Aligned_cols=134 Identities=13% Similarity=0.103 Sum_probs=71.5
Q ss_pred cceEeeecccchhhhhhhcCC-CeEEEEecCCCCCccchHHHHhhcc--------cchhhccccccCCC-CCccceeeec
Q 006662 477 YRNLLDMNAYLGGFAAALVDD-PLWVMNTVPVEAKINTLGVIYERGL--------IGTYQNWCEAMSTY-PRTYDLIHAD 546 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~~-~v~~mnv~~~~~~~~~l~~~~eRgl--------i~~~~~~ce~~~~y-p~t~Dl~H~~ 546 (636)
..+|||+|||.|+|+.+|+++ .|+.+-+.|.. ..+.++.+ +-.++. +..+..+ +.+||+|-|+
T Consensus 75 g~~VLDlGcGtG~~s~~la~~~~V~gvD~s~m~------~~a~~~~~~~~~~~~~v~~~~~-~~D~~~l~~~~fD~V~sd 147 (265)
T 2oxt_A 75 TGRVVDLGCGRGGWSYYAASRPHVMDVRAYTLG------VGGHEVPRITESYGWNIVKFKS-RVDIHTLPVERTDVIMCD 147 (265)
T ss_dssp CEEEEEESCTTSHHHHHHHTSTTEEEEEEECCC------CSSCCCCCCCCBTTGGGEEEEC-SCCTTTSCCCCCSEEEEC
T ss_pred CCEEEEeCcCCCHHHHHHHHcCcEEEEECchhh------hhhhhhhhhhhccCCCeEEEec-ccCHhHCCCCCCcEEEEe
Confidence 578999999999999998875 45555555531 00111111 111100 1222334 4899999997
Q ss_pred cccccCCCCcCHH---HHHHHHhhcccCCc--EEEEEe----CHHHHHHHHHHHhcCCCceEEeccCCCCCCcceEEEEE
Q 006662 547 SIFSLYKDRCEME---DVLLEMDRILRPEG--SVIIRD----DVDILVKIKSITDGMEWEGRIADHENGPRQREKILFAN 617 (636)
Q Consensus 547 ~~fs~~~~~c~~~---~~l~e~dRiLrPgG--~~i~~d----~~~~~~~~~~~~~~~~W~~~~~~~e~~~~~~~~~l~~~ 617 (636)
..+......-+.. .+|-++.|+||||| .|++.. ..+++..++.+.+.+. .+.+...-+-....|..+||.
T Consensus 148 ~~~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~~~~~~~~~~l~~l~~~f~-~v~~~k~~sR~~s~E~y~v~~ 226 (265)
T 2oxt_A 148 VGESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLCPYSVEVMERLSVMQRKWG-GGLVRNPYSRNSTHEMYFTSR 226 (265)
T ss_dssp CCCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESCTTSHHHHHHHHHHHHHHC-CEEECCTTSCTTCCCEEEESS
T ss_pred CcccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCCCCChhHHHHHHHHHHHcC-CEEEEEecccCCCccEEEEec
Confidence 5522111000001 27888999999999 999963 2322233333332221 223332222233467777774
Q ss_pred e
Q 006662 618 K 618 (636)
Q Consensus 618 K 618 (636)
+
T Consensus 227 ~ 227 (265)
T 2oxt_A 227 A 227 (265)
T ss_dssp C
T ss_pred C
Confidence 3
No 400
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=98.03 E-value=4.6e-06 Score=83.21 Aligned_cols=107 Identities=12% Similarity=0.120 Sum_probs=76.5
Q ss_pred CCcceEeeecccchhhhhhhcCC---CeEEEEecCCCCCccchHHHHhh----cccc---hhh-ccccccCCCC-Cccce
Q 006662 475 GRYRNLLDMNAYLGGFAAALVDD---PLWVMNTVPVEAKINTLGVIYER----GLIG---TYQ-NWCEAMSTYP-RTYDL 542 (636)
Q Consensus 475 ~~~r~vlD~~~g~ggfaa~l~~~---~v~~mnv~~~~~~~~~l~~~~eR----gli~---~~~-~~ce~~~~yp-~t~Dl 542 (636)
....+|||+|||.|.++.+|++. .. .|+.+|.++.++..+.++ |+-. +.+ |.. ..+| .+||+
T Consensus 92 ~~~~~vldiG~G~G~~~~~l~~~~~~~~---~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~---~~~~~~~~D~ 165 (255)
T 3mb5_A 92 SPGDFIVEAGVGSGALTLFLANIVGPEG---RVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIY---EGIEEENVDH 165 (255)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTS---EEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGG---GCCCCCSEEE
T ss_pred CCCCEEEEecCCchHHHHHHHHHhCCCe---EEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchh---hccCCCCcCE
Confidence 34678999999999999999766 33 445557766788887776 5532 222 333 3355 78999
Q ss_pred eeeccccccCCCCcCHHHHHHHHhhcccCCcEEEEEe-CHHHHHHHHHHHhcCC
Q 006662 543 IHADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRD-DVDILVKIKSITDGME 595 (636)
Q Consensus 543 ~H~~~~fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d-~~~~~~~~~~~~~~~~ 595 (636)
|-+ +--+...+|-++.|+|+|||.+++.. ..+...++.+.++...
T Consensus 166 v~~--------~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~g 211 (255)
T 3mb5_A 166 VIL--------DLPQPERVVEHAAKALKPGGFFVAYTPCSNQVMRLHEKLREFK 211 (255)
T ss_dssp EEE--------CSSCGGGGHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHTG
T ss_pred EEE--------CCCCHHHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcC
Confidence 877 23344678999999999999999875 4556667777766665
No 401
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=98.03 E-value=2e-06 Score=84.41 Aligned_cols=93 Identities=14% Similarity=0.083 Sum_probs=66.1
Q ss_pred CcceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhhcc----cchhh-ccccccCCCCCccceeeeccccc
Q 006662 476 RYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERGL----IGTYQ-NWCEAMSTYPRTYDLIHADSIFS 550 (636)
Q Consensus 476 ~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRgl----i~~~~-~~ce~~~~yp~t~Dl~H~~~~fs 550 (636)
...+|||+|||.|.++..|.+.. -+|+.+|.++.++..+.++.- +-+.+ |..+.+ +-+.+||+|.+++++.
T Consensus 70 ~~~~vLdiG~G~G~~~~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~v~~~~~~~ 145 (231)
T 1vbf_A 70 KGQKVLEIGTGIGYYTALIAEIV---DKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGY-EEEKPYDRVVVWATAP 145 (231)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHS---SEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCC-GGGCCEEEEEESSBBS
T ss_pred CCCEEEEEcCCCCHHHHHHHHHc---CEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCccccc-ccCCCccEEEECCcHH
Confidence 35689999999999999998865 366677777788888887731 22222 322211 1237899999987775
Q ss_pred cCCCCcCHHHHHHHHhhcccCCcEEEEEeCH
Q 006662 551 LYKDRCEMEDVLLEMDRILRPEGSVIIRDDV 581 (636)
Q Consensus 551 ~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~~ 581 (636)
... -++-|+|||||.+++....
T Consensus 146 ~~~---------~~~~~~L~pgG~l~~~~~~ 167 (231)
T 1vbf_A 146 TLL---------CKPYEQLKEGGIMILPIGV 167 (231)
T ss_dssp SCC---------HHHHHTEEEEEEEEEEECS
T ss_pred HHH---------HHHHHHcCCCcEEEEEEcC
Confidence 322 3789999999999998643
No 402
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.03 E-value=1.5e-05 Score=85.70 Aligned_cols=113 Identities=15% Similarity=0.095 Sum_probs=79.0
Q ss_pred HHHHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhcC----------------------------------------CE
Q 006662 203 AYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRN----------------------------------------IL 242 (636)
Q Consensus 203 ~~id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~~----------------------------------------v~ 242 (636)
.....+..+....++. +|||++||+|.++..++..+ ..
T Consensus 182 ~lAa~ll~~~~~~~~~--~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~ 259 (385)
T 3ldu_A 182 TLAAGLIYLTPWKAGR--VLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFK 259 (385)
T ss_dssp HHHHHHHHTSCCCTTS--CEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCC
T ss_pred HHHHHHHHhhCCCCCC--eEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCce
Confidence 3444555555444444 89999999999998887652 23
Q ss_pred EEEcCcCCchHHHHHHHHHc----CC--CeEEEEeccccCCCCCCCeeEEEeccccccccc---ChHHHHHHHHhcccC-
Q 006662 243 AVSFAPRDTHEAQVQFALER----GV--PALIGVMASIRLPYPSRAFDMAHCSRCLIPWGQ---YDGLYLIEVDRVLRP- 312 (636)
Q Consensus 243 vv~i~p~Dis~a~l~~A~er----g~--~~~~~~~d~~~Lpf~~~sFDlV~~s~~L~h~~~---d~~~~L~el~RvLKP- 312 (636)
++++ |+++.+++.|+++ ++ .+.+.+.|...++.+ .+||+|+++.-+..-.. +...+++++.++||+
T Consensus 260 V~Gv---Did~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~~~-~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~ 335 (385)
T 3ldu_A 260 IYGY---DIDEESIDIARENAEIAGVDEYIEFNVGDATQFKSE-DEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKL 335 (385)
T ss_dssp EEEE---ESCHHHHHHHHHHHHHHTCGGGEEEEECCGGGCCCS-CBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTS
T ss_pred EEEE---ECCHHHHHHHHHHHHHcCCCCceEEEECChhhcCcC-CCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhC
Confidence 4555 8899999888754 44 478899998888765 58999999875522221 124567777777776
Q ss_pred -CcEEEEEeC
Q 006662 313 -GGYWILSGP 321 (636)
Q Consensus 313 -GG~Liis~p 321 (636)
||.+++..+
T Consensus 336 ~g~~~~iit~ 345 (385)
T 3ldu_A 336 KNWSYYLITS 345 (385)
T ss_dssp BSCEEEEEES
T ss_pred CCCEEEEEEC
Confidence 888888765
No 403
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=98.02 E-value=9.8e-06 Score=77.60 Aligned_cols=132 Identities=12% Similarity=0.174 Sum_probs=72.0
Q ss_pred cceEeeecccchhhhhhhcCC-C-----eEEEEecCCCCCccchHHHHhhcccchhhccccccC----------------
Q 006662 477 YRNLLDMNAYLGGFAAALVDD-P-----LWVMNTVPVEAKINTLGVIYERGLIGTYQNWCEAMS---------------- 534 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~~-~-----v~~mnv~~~~~~~~~l~~~~eRgli~~~~~~ce~~~---------------- 534 (636)
..+|||+|||.|+++.+|+++ + |+.+-+.|... ..++.-...|+.+ ..
T Consensus 23 ~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~~---------~~~v~~~~~d~~~-~~~~~~~~~~~i~~~~~~ 92 (201)
T 2plw_A 23 NKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMDP---------IPNVYFIQGEIGK-DNMNNIKNINYIDNMNNN 92 (201)
T ss_dssp TEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCCC---------CTTCEEEECCTTT-TSSCCC-----------C
T ss_pred CCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccCC---------CCCceEEEccccc-hhhhhhccccccccccch
Confidence 468999999999999999764 2 44444444211 0121101112221 11
Q ss_pred --------CCC-CccceeeeccccccCCCC-cC-------HHHHHHHHhhcccCCcEEEEEeCH-HHHHHHHHHHhcCCC
Q 006662 535 --------TYP-RTYDLIHADSIFSLYKDR-CE-------MEDVLLEMDRILRPEGSVIIRDDV-DILVKIKSITDGMEW 596 (636)
Q Consensus 535 --------~yp-~t~Dl~H~~~~fs~~~~~-c~-------~~~~l~e~dRiLrPgG~~i~~d~~-~~~~~~~~~~~~~~W 596 (636)
.+| .+||+|.+++.+...... -+ ...+|.++-|+|||||.+++..-. +....+...++..-.
T Consensus 93 ~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~l~~~l~~~f~ 172 (201)
T 2plw_A 93 SVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYLGSQTNNLKTYLKGMFQ 172 (201)
T ss_dssp HHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTTHHHHHHHHHTTEE
T ss_pred hhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeCCCCHHHHHHHHHHHHh
Confidence 034 689999997765432100 01 124788999999999999996321 223344444444322
Q ss_pred ceEEecc-CCCCCCcceEEEEEe
Q 006662 597 EGRIADH-ENGPRQREKILFANK 618 (636)
Q Consensus 597 ~~~~~~~-e~~~~~~~~~l~~~K 618 (636)
++.+... ...+...|..+||++
T Consensus 173 ~v~~~~~~~~r~~s~e~y~v~~~ 195 (201)
T 2plw_A 173 LVHTTKPKASRNESREIYLVCKN 195 (201)
T ss_dssp EEEECCCC-----CCEEEEEEEE
T ss_pred eEEEECCcccCCcCceEEEEEec
Confidence 3333322 222345688999976
No 404
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=98.02 E-value=4.8e-06 Score=82.30 Aligned_cols=96 Identities=15% Similarity=0.118 Sum_probs=60.5
Q ss_pred CcceEeeecccchhhhhhhcCC-CeEEEEecCCCCCccchHHHHhhcc----cchh-hccccc--cCCCCCccceeeecc
Q 006662 476 RYRNLLDMNAYLGGFAAALVDD-PLWVMNTVPVEAKINTLGVIYERGL----IGTY-QNWCEA--MSTYPRTYDLIHADS 547 (636)
Q Consensus 476 ~~r~vlD~~~g~ggfaa~l~~~-~v~~mnv~~~~~~~~~l~~~~eRgl----i~~~-~~~ce~--~~~yp~t~Dl~H~~~ 547 (636)
...+|||+|||.|.++.+|++. + .-.|+.+|.++.++..+.++-- +-.. .|..+. +..++.+||+|..+
T Consensus 74 ~~~~VLDlGcG~G~~~~~la~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~~- 150 (230)
T 1fbn_A 74 RDSKILYLGASAGTTPSHVADIAD--KGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIVEKVDVIYED- 150 (230)
T ss_dssp TTCEEEEESCCSSHHHHHHHHHTT--TSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTSCCEEEEEEC-
T ss_pred CCCEEEEEcccCCHHHHHHHHHcC--CcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCcccccccCccEEEEEEe-
Confidence 3568999999999999999765 3 1245556666667766655421 1111 122111 12234789987531
Q ss_pred ccccCCCCcCHHHHHHHHhhcccCCcEEEEE
Q 006662 548 IFSLYKDRCEMEDVLLEMDRILRPEGSVIIR 578 (636)
Q Consensus 548 ~fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~ 578 (636)
+ ...-..+.+|.++.|+|||||.+++.
T Consensus 151 ~----~~~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 151 V----AQPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp C----CSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred c----CChhHHHHHHHHHHHhCCCCcEEEEE
Confidence 1 11112367899999999999999994
No 405
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=98.02 E-value=3.6e-06 Score=84.22 Aligned_cols=103 Identities=12% Similarity=0.067 Sum_probs=70.7
Q ss_pred CcceEeeecccchhhhhhhcCCC-eEEEEecCCCCCccchHHHHhh-------cc-------------------------
Q 006662 476 RYRNLLDMNAYLGGFAAALVDDP-LWVMNTVPVEAKINTLGVIYER-------GL------------------------- 522 (636)
Q Consensus 476 ~~r~vlD~~~g~ggfaa~l~~~~-v~~mnv~~~~~~~~~l~~~~eR-------gl------------------------- 522 (636)
...+|||+|||+|.++..|++.- .-..+|+.+|.++.++..+.++ |+
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQA 130 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhhh
Confidence 45789999999999999987650 0124778888887888777643 33
Q ss_pred ---cc-------------hhh-ccccccCCC------C-CccceeeeccccccCCC------CcCHHHHHHHHhhcccCC
Q 006662 523 ---IG-------------TYQ-NWCEAMSTY------P-RTYDLIHADSIFSLYKD------RCEMEDVLLEMDRILRPE 572 (636)
Q Consensus 523 ---i~-------------~~~-~~ce~~~~y------p-~t~Dl~H~~~~fs~~~~------~c~~~~~l~e~dRiLrPg 572 (636)
+. ..+ |+. ... + ..||+|-++-.|..... .-....++-++-|+|+||
T Consensus 131 ~~~v~~~~~~~~~~~~~~~~~~D~~---~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg 207 (250)
T 1o9g_A 131 ARRLRERLTAEGGALPCAIRTADVF---DPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAH 207 (250)
T ss_dssp HHHHHHHHHHTTSSCCEEEEECCTT---CGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTT
T ss_pred hhhhhhhccccccccccceeecccc---cccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCC
Confidence 11 221 222 223 3 48999999866543322 123458999999999999
Q ss_pred cEEEEEeCH
Q 006662 573 GSVIIRDDV 581 (636)
Q Consensus 573 G~~i~~d~~ 581 (636)
|++++.+..
T Consensus 208 G~l~~~~~~ 216 (250)
T 1o9g_A 208 AVIAVTDRS 216 (250)
T ss_dssp CEEEEEESS
T ss_pred cEEEEeCcc
Confidence 999997654
No 406
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=98.02 E-value=5.4e-06 Score=87.72 Aligned_cols=96 Identities=17% Similarity=0.181 Sum_probs=66.3
Q ss_pred CcceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhh----cc---cchhhccccccC--CCCCccceeeec
Q 006662 476 RYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GL---IGTYQNWCEAMS--TYPRTYDLIHAD 546 (636)
Q Consensus 476 ~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl---i~~~~~~ce~~~--~yp~t~Dl~H~~ 546 (636)
...+|||+|||.|.++..+++.+. -.|+.+|.+ .++..+.++ |+ +.+++ ..+. ..|..||+|-+.
T Consensus 50 ~~~~VLDiGcGtG~ls~~la~~g~--~~V~~vD~s-~~~~~a~~~~~~~~l~~~v~~~~---~d~~~~~~~~~~D~Ivs~ 123 (348)
T 2y1w_A 50 KDKIVLDVGCGSGILSFFAAQAGA--RKIYAVEAS-TMAQHAEVLVKSNNLTDRIVVIP---GKVEEVSLPEQVDIIISE 123 (348)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTC--SEEEEEECS-THHHHHHHHHHHTTCTTTEEEEE---SCTTTCCCSSCEEEEEEC
T ss_pred CcCEEEEcCCCccHHHHHHHhCCC--CEEEEECCH-HHHHHHHHHHHHcCCCCcEEEEE---cchhhCCCCCceeEEEEe
Confidence 356899999999999999887754 244555555 355555443 54 33332 2222 346889999998
Q ss_pred cccccCCCCcCHHHHHHHHhhcccCCcEEEEE
Q 006662 547 SIFSLYKDRCEMEDVLLEMDRILRPEGSVIIR 578 (636)
Q Consensus 547 ~~fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~ 578 (636)
.++..... -.+...+.++.|+|+|||.+++.
T Consensus 124 ~~~~~~~~-~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 124 PMGYMLFN-ERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp CCBTTBTT-TSHHHHHHHGGGGEEEEEEEESC
T ss_pred CchhcCCh-HHHHHHHHHHHhhcCCCeEEEEe
Confidence 77664432 24667888999999999999964
No 407
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=98.02 E-value=8.8e-06 Score=81.76 Aligned_cols=95 Identities=15% Similarity=0.092 Sum_probs=58.3
Q ss_pred CCcceEeeecccchhhhhhhcCC---CeEEEEecCCCCCccc----hHHHHhhc-ccchhhcccccc--CCCCCccceee
Q 006662 475 GRYRNLLDMNAYLGGFAAALVDD---PLWVMNTVPVEAKINT----LGVIYERG-LIGTYQNWCEAM--STYPRTYDLIH 544 (636)
Q Consensus 475 ~~~r~vlD~~~g~ggfaa~l~~~---~v~~mnv~~~~~~~~~----l~~~~eRg-li~~~~~~ce~~--~~yp~t~Dl~H 544 (636)
....+|||+|||.|+++.+|++. .- .|+.+|.++.+ +..+.+|. +.-+..|-.... ...+..||+|.
T Consensus 75 ~~g~~VLDlG~GtG~~t~~la~~v~~~G---~V~avD~s~~~l~~l~~~a~~r~nv~~i~~Da~~~~~~~~~~~~~D~I~ 151 (232)
T 3id6_C 75 RKGTKVLYLGAASGTTISHVSDIIELNG---KAYGVEFSPRVVRELLLVAQRRPNIFPLLADARFPQSYKSVVENVDVLY 151 (232)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHTTTS---EEEEEECCHHHHHHHHHHHHHCTTEEEEECCTTCGGGTTTTCCCEEEEE
T ss_pred CCCCEEEEEeecCCHHHHHHHHHhCCCC---EEEEEECcHHHHHHHHHHhhhcCCeEEEEcccccchhhhccccceEEEE
Confidence 44689999999999999888753 11 23444555444 34444442 222222322211 12246899998
Q ss_pred eccccccCCCCcCHHHHHHH-HhhcccCCcEEEEE
Q 006662 545 ADSIFSLYKDRCEMEDVLLE-MDRILRPEGSVIIR 578 (636)
Q Consensus 545 ~~~~fs~~~~~c~~~~~l~e-~dRiLrPgG~~i~~ 578 (636)
++..+ .+...+|.+ +.|+|||||.+++.
T Consensus 152 ~d~a~------~~~~~il~~~~~~~LkpGG~lvis 180 (232)
T 3id6_C 152 VDIAQ------PDQTDIAIYNAKFFLKVNGDMLLV 180 (232)
T ss_dssp ECCCC------TTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ecCCC------hhHHHHHHHHHHHhCCCCeEEEEE
Confidence 86432 455566654 56699999999986
No 408
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=98.01 E-value=2.1e-06 Score=84.74 Aligned_cols=95 Identities=15% Similarity=0.217 Sum_probs=68.1
Q ss_pred cceEeeecccchhhhhhhcCC-CeEEEEecCCCCCccchHHHHhh----cc---cchhh-ccccccCCC--CCccceeee
Q 006662 477 YRNLLDMNAYLGGFAAALVDD-PLWVMNTVPVEAKINTLGVIYER----GL---IGTYQ-NWCEAMSTY--PRTYDLIHA 545 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~~-~v~~mnv~~~~~~~~~l~~~~eR----gl---i~~~~-~~ce~~~~y--p~t~Dl~H~ 545 (636)
..+|||+|||.|.++.+|++. + ..+|+.+|.++..+..+.++ |+ +.+.+ |..+..... +.+||+|-+
T Consensus 55 ~~~vLdiG~G~G~~~~~la~~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~ 132 (233)
T 2gpy_A 55 PARILEIGTAIGYSAIRMAQALP--EATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLFI 132 (233)
T ss_dssp CSEEEEECCTTSHHHHHHHHHCT--TCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEEE
T ss_pred CCEEEEecCCCcHHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEEE
Confidence 468999999999999998765 1 13556667776788887776 54 23322 333322222 478999988
Q ss_pred ccccccCCCCcCHHHHHHHHhhcccCCcEEEEEe
Q 006662 546 DSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRD 579 (636)
Q Consensus 546 ~~~fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d 579 (636)
+..++ ....+|-++-|+|||||.+++.+
T Consensus 133 ~~~~~------~~~~~l~~~~~~L~pgG~lv~~~ 160 (233)
T 2gpy_A 133 DAAKG------QYRRFFDMYSPMVRPGGLILSDN 160 (233)
T ss_dssp EGGGS------CHHHHHHHHGGGEEEEEEEEEET
T ss_pred CCCHH------HHHHHHHHHHHHcCCCeEEEEEc
Confidence 66543 56889999999999999999974
No 409
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=98.01 E-value=1.7e-05 Score=84.39 Aligned_cols=142 Identities=13% Similarity=0.164 Sum_probs=90.9
Q ss_pred ccCCCCCcceEeeecccchhhhhhhcCC--CeEEEEecCCCCCccchHHHHhh----cccchhhcc-ccccCCCCCccce
Q 006662 470 QLAQPGRYRNLLDMNAYLGGFAAALVDD--PLWVMNTVPVEAKINTLGVIYER----GLIGTYQNW-CEAMSTYPRTYDL 542 (636)
Q Consensus 470 ~l~~~~~~r~vlD~~~g~ggfaa~l~~~--~v~~mnv~~~~~~~~~l~~~~eR----gli~~~~~~-ce~~~~yp~t~Dl 542 (636)
.+.. ....+|||+|||.|.++.+|++. ++ .++..|. +.++..+.++ |+-+-+.-. ...+.++|..||+
T Consensus 197 ~~~~-~~~~~vlDvG~G~G~~~~~l~~~~p~~---~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~p~~~D~ 271 (369)
T 3gwz_A 197 AYDF-SGAATAVDIGGGRGSLMAAVLDAFPGL---RGTLLER-PPVAEEARELLTGRGLADRCEILPGDFFETIPDGADV 271 (369)
T ss_dssp HSCC-TTCSEEEEETCTTSHHHHHHHHHCTTC---EEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTTCCCSSCSE
T ss_pred hCCC-ccCcEEEEeCCCccHHHHHHHHHCCCC---eEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCCCCCCCCceE
Confidence 3444 55799999999999999999764 33 2334455 3666666543 442211111 1233567778999
Q ss_pred eeeccccccCCCCcCHHHHHHHHhhcccCCcEEEEEeCH------------H------------HHHHHHHHHhcCCCce
Q 006662 543 IHADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDDV------------D------------ILVKIKSITDGMEWEG 598 (636)
Q Consensus 543 ~H~~~~fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~~------------~------------~~~~~~~~~~~~~W~~ 598 (636)
|.+.+++-.+.+. ....+|-++-|+|+|||+++|.|.. + ....++++++.-.++.
T Consensus 272 v~~~~vlh~~~d~-~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf~~ 350 (369)
T 3gwz_A 272 YLIKHVLHDWDDD-DVVRILRRIATAMKPDSRLLVIDNLIDERPAASTLFVDLLLLVLVGGAERSESEFAALLEKSGLRV 350 (369)
T ss_dssp EEEESCGGGSCHH-HHHHHHHHHHTTCCTTCEEEEEEEBCCSSCCHHHHHHHHHHHHHHSCCCBCHHHHHHHHHTTTEEE
T ss_pred EEhhhhhccCCHH-HHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhHhhHHHHhhcCCccCCHHHHHHHHHHCCCeE
Confidence 9998888554321 2247999999999999999997521 1 1355667777777776
Q ss_pred EEeccCCCCCCcceEEEEEec
Q 006662 599 RIADHENGPRQREKILFANKK 619 (636)
Q Consensus 599 ~~~~~e~~~~~~~~~l~~~K~ 619 (636)
.-.... ......|+.++|.
T Consensus 351 ~~~~~~--~~~~~svie~~~a 369 (369)
T 3gwz_A 351 ERSLPC--GAGPVRIVEIRRA 369 (369)
T ss_dssp EEEEEC--SSSSEEEEEEEEC
T ss_pred EEEEEC--CCCCcEEEEEEeC
Confidence 644321 1134678888763
No 410
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=98.01 E-value=2.1e-06 Score=86.37 Aligned_cols=90 Identities=17% Similarity=0.203 Sum_probs=64.5
Q ss_pred CcceEeeecccchhhhhhhcCC--CeEEEEecCCCCCccchHHHHhhcc-cchhh-ccccccCCCC-Cccceeeeccccc
Q 006662 476 RYRNLLDMNAYLGGFAAALVDD--PLWVMNTVPVEAKINTLGVIYERGL-IGTYQ-NWCEAMSTYP-RTYDLIHADSIFS 550 (636)
Q Consensus 476 ~~r~vlD~~~g~ggfaa~l~~~--~v~~mnv~~~~~~~~~l~~~~eRgl-i~~~~-~~ce~~~~yp-~t~Dl~H~~~~fs 550 (636)
...+|||+|||.|.++..|++. +. +|+.+|.++.++..+.+++- +-... |. +.+ +++ .+||+|.+.+.
T Consensus 85 ~~~~vLdiG~G~G~~~~~l~~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~d~-~~~-~~~~~~fD~v~~~~~-- 157 (269)
T 1p91_A 85 KATAVLDIGCGEGYYTHAFADALPEI---TTFGLDVSKVAIKAAAKRYPQVTFCVASS-HRL-PFSDTSMDAIIRIYA-- 157 (269)
T ss_dssp TCCEEEEETCTTSTTHHHHHHTCTTS---EEEEEESCHHHHHHHHHHCTTSEEEECCT-TSC-SBCTTCEEEEEEESC--
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCC---eEEEEeCCHHHHHHHHHhCCCcEEEEcch-hhC-CCCCCceeEEEEeCC--
Confidence 3568999999999999999876 33 45666777789999988862 11111 11 122 233 79999998433
Q ss_pred cCCCCcCHHHHHHHHhhcccCCcEEEEEeC
Q 006662 551 LYKDRCEMEDVLLEMDRILRPEGSVIIRDD 580 (636)
Q Consensus 551 ~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~ 580 (636)
+..|-|+.|+|||||.+++.+.
T Consensus 158 --------~~~l~~~~~~L~pgG~l~~~~~ 179 (269)
T 1p91_A 158 --------PCKAEELARVVKPGGWVITATP 179 (269)
T ss_dssp --------CCCHHHHHHHEEEEEEEEEEEE
T ss_pred --------hhhHHHHHHhcCCCcEEEEEEc
Confidence 2358999999999999999754
No 411
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.00 E-value=6.9e-07 Score=96.46 Aligned_cols=127 Identities=16% Similarity=0.142 Sum_probs=81.3
Q ss_pred HHHHHHhhhccCCCCCcceEeeeccc------chhhhhhhcCC--CeEEEEecCCCCCccchHHHHhhcccchhh-cccc
Q 006662 461 VTYYKSVDYQLAQPGRYRNLLDMNAY------LGGFAAALVDD--PLWVMNTVPVEAKINTLGVIYERGLIGTYQ-NWCE 531 (636)
Q Consensus 461 v~~y~~~~~~l~~~~~~r~vlD~~~g------~ggfaa~l~~~--~v~~mnv~~~~~~~~~l~~~~eRgli~~~~-~~ce 531 (636)
...|.+++..+.. +..+|||+||| +||....|.+. += ..|+.+|.++.+.. .... |-++. |- +
T Consensus 203 ~~~Ye~lL~~l~~--~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~--a~V~GVDiSp~m~~--~~~r-I~fv~GDa-~ 274 (419)
T 3sso_A 203 TPHYDRHFRDYRN--QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPR--GQIYGLDIMDKSHV--DELR-IRTIQGDQ-N 274 (419)
T ss_dssp HHHHHHHHGGGTT--SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTT--CEEEEEESSCCGGG--CBTT-EEEEECCT-T
T ss_pred HHHHHHHHHhhcC--CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCC--CEEEEEECCHHHhh--cCCC-cEEEEecc-c
Confidence 5568887766543 35799999999 78877777653 11 24455565545421 1111 22222 21 1
Q ss_pred ccCCC------CCccceeeeccccccCCCCcCHHHHHHHHhhcccCCcEEEEEeC------------------HHHHHHH
Q 006662 532 AMSTY------PRTYDLIHADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDD------------------VDILVKI 587 (636)
Q Consensus 532 ~~~~y------p~t~Dl~H~~~~fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~------------------~~~~~~~ 587 (636)
.++.- +.+||+|.+++.. .-.+....|.|+-|+|||||++||.|- ..+++.+
T Consensus 275 dlpf~~~l~~~d~sFDlVisdgsH----~~~d~~~aL~el~rvLKPGGvlVi~Dl~tsy~p~f~G~~~~~~~~~tii~~l 350 (419)
T 3sso_A 275 DAEFLDRIARRYGPFDIVIDDGSH----INAHVRTSFAALFPHVRPGGLYVIEDMWTAYWPGFGGQADPQECSGTSLGLL 350 (419)
T ss_dssp CHHHHHHHHHHHCCEEEEEECSCC----CHHHHHHHHHHHGGGEEEEEEEEEECGGGGGCTBTTCCSSTTCCTTSHHHHH
T ss_pred ccchhhhhhcccCCccEEEECCcc----cchhHHHHHHHHHHhcCCCeEEEEEecccccCcccCCCccCCcchhHHHHHH
Confidence 11111 3789999987542 123567899999999999999999743 2368888
Q ss_pred HHHHhcCCCceE
Q 006662 588 KSITDGMEWEGR 599 (636)
Q Consensus 588 ~~~~~~~~W~~~ 599 (636)
++++..+.|.-.
T Consensus 351 k~l~D~l~~~~~ 362 (419)
T 3sso_A 351 KSLIDAIQHQEL 362 (419)
T ss_dssp HHHHHHHTGGGS
T ss_pred HHHHHHhccccc
Confidence 899888887653
No 412
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.00 E-value=2.2e-05 Score=80.63 Aligned_cols=85 Identities=9% Similarity=0.049 Sum_probs=66.1
Q ss_pred HHHHHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhcCCEEEEcCcCCchHHHHHHHHHcC--CCeEEEEeccccCCCC
Q 006662 202 DAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALERG--VPALIGVMASIRLPYP 279 (636)
Q Consensus 202 ~~~id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~~v~vv~i~p~Dis~a~l~~A~erg--~~~~~~~~d~~~Lpf~ 279 (636)
...++.+.+.+...+ . +|||||||+|.++..|++++..++.+ |+++.+++.++++. .++.+..+|...++++
T Consensus 33 ~~i~~~Iv~~~~~~~--~-~VLEIG~G~G~lt~~L~~~~~~V~av---Eid~~~~~~l~~~~~~~~v~vi~~D~l~~~~~ 106 (271)
T 3fut_A 33 EAHLRRIVEAARPFT--G-PVFEVGPGLGALTRALLEAGAEVTAI---EKDLRLRPVLEETLSGLPVRLVFQDALLYPWE 106 (271)
T ss_dssp HHHHHHHHHHHCCCC--S-CEEEECCTTSHHHHHHHHTTCCEEEE---ESCGGGHHHHHHHTTTSSEEEEESCGGGSCGG
T ss_pred HHHHHHHHHhcCCCC--C-eEEEEeCchHHHHHHHHHcCCEEEEE---ECCHHHHHHHHHhcCCCCEEEEECChhhCChh
Confidence 345667777776544 3 79999999999999999997666666 77888888887663 3588999999888876
Q ss_pred CC-CeeEEEecccc
Q 006662 280 SR-AFDMAHCSRCL 292 (636)
Q Consensus 280 ~~-sFDlV~~s~~L 292 (636)
+. .||.|+++.-.
T Consensus 107 ~~~~~~~iv~NlPy 120 (271)
T 3fut_A 107 EVPQGSLLVANLPY 120 (271)
T ss_dssp GSCTTEEEEEEECS
T ss_pred hccCccEEEecCcc
Confidence 43 68999987644
No 413
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=97.99 E-value=1.1e-05 Score=79.61 Aligned_cols=134 Identities=15% Similarity=0.067 Sum_probs=76.0
Q ss_pred CcceEeeecccchhhhhhhcCC--CeEEEEecCCCCCcc----chHHHHhhcccchhh-ccccc--cCCCCCccceeeec
Q 006662 476 RYRNLLDMNAYLGGFAAALVDD--PLWVMNTVPVEAKIN----TLGVIYERGLIGTYQ-NWCEA--MSTYPRTYDLIHAD 546 (636)
Q Consensus 476 ~~r~vlD~~~g~ggfaa~l~~~--~v~~mnv~~~~~~~~----~l~~~~eRgli~~~~-~~ce~--~~~yp~t~Dl~H~~ 546 (636)
...+|||+|||.|.++.+|++. +- -.|+.+|.++. .+..+.++.-+-.++ |..+. +...+.+||+|.++
T Consensus 77 ~~~~vLDlG~G~G~~~~~la~~~g~~--~~v~gvD~s~~~i~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~~D~V~~~ 154 (233)
T 2ipx_A 77 PGAKVLYLGAASGTTVSHVSDIVGPD--GLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKYRMLIAMVDVIFAD 154 (233)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTT--CEEEEECCCHHHHHHHHHHHHHCTTEEEECSCTTCGGGGGGGCCCEEEEEEC
T ss_pred CCCEEEEEcccCCHHHHHHHHHhCCC--cEEEEEECCHHHHHHHHHHhhccCCeEEEEcccCChhhhcccCCcEEEEEEc
Confidence 3568999999999999999765 11 13344465533 344444432222222 33221 11124789999984
Q ss_pred cccccCCCCcCH-HHHHHHHhhcccCCcEEEEEeCHH----------HHHHHHHHHhcCCCceEE-eccCCCCCCcceEE
Q 006662 547 SIFSLYKDRCEM-EDVLLEMDRILRPEGSVIIRDDVD----------ILVKIKSITDGMEWEGRI-ADHENGPRQREKIL 614 (636)
Q Consensus 547 ~~fs~~~~~c~~-~~~l~e~dRiLrPgG~~i~~d~~~----------~~~~~~~~~~~~~W~~~~-~~~e~~~~~~~~~l 614 (636)
.. ..+. ..++.++-|+|||||.+++.-... .+.+-.++++...|+... .+.+.-+ ...-++
T Consensus 155 ~~------~~~~~~~~~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~-~~~~~v 227 (233)
T 2ipx_A 155 VA------QPDQTRIVALNAHTFLRNGGHFVISIKANCIDSTASAEAVFASEVKKMQQENMKPQEQLTLEPYE-RDHAVV 227 (233)
T ss_dssp CC------CTTHHHHHHHHHHHHEEEEEEEEEEEEHHHHCSSSCHHHHHHHHHHTTGGGTEEEEEEEECTTTS-SSEEEE
T ss_pred CC------CccHHHHHHHHHHHHcCCCeEEEEEEcccccccCCCHHHHHHHHHHHHHHCCCceEEEEecCCcc-CCcEEE
Confidence 33 2222 355778999999999999964332 122223555666676653 3333222 234566
Q ss_pred EEEe
Q 006662 615 FANK 618 (636)
Q Consensus 615 ~~~K 618 (636)
+++|
T Consensus 228 ~~~~ 231 (233)
T 2ipx_A 228 VGVY 231 (233)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 6665
No 414
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=97.98 E-value=4.3e-06 Score=81.04 Aligned_cols=134 Identities=13% Similarity=0.061 Sum_probs=72.6
Q ss_pred cceEeeecccchhhhhhhcCCC--eEEEEecCCCCCccchHHHHhhcccchhhcccccc-----CC-CC----Cccceee
Q 006662 477 YRNLLDMNAYLGGFAAALVDDP--LWVMNTVPVEAKINTLGVIYERGLIGTYQNWCEAM-----ST-YP----RTYDLIH 544 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~~~--v~~mnv~~~~~~~~~l~~~~eRgli~~~~~~ce~~-----~~-yp----~t~Dl~H 544 (636)
..+|||+|||.|+++.+|+++. |+.+-+.|.... .++--+..|..+.- .. ++ .+||+|-
T Consensus 26 g~~VLDlG~G~G~~s~~la~~~~~V~gvD~~~~~~~---------~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~D~Vl 96 (191)
T 3dou_A 26 GDAVIEIGSSPGGWTQVLNSLARKIISIDLQEMEEI---------AGVRFIRCDIFKETIFDDIDRALREEGIEKVDDVV 96 (191)
T ss_dssp TCEEEEESCTTCHHHHHHTTTCSEEEEEESSCCCCC---------TTCEEEECCTTSSSHHHHHHHHHHHHTCSSEEEEE
T ss_pred CCEEEEEeecCCHHHHHHHHcCCcEEEEeccccccC---------CCeEEEEccccCHHHHHHHHHHhhcccCCcceEEe
Confidence 6799999999999999999874 344444442110 12211111222100 00 11 4899999
Q ss_pred eccccccCCC--------CcCHHHHHHHHhhcccCCcEEEEEeC-HHHHHHHHHHHhcCCCceEEec-cCCCCCCcceEE
Q 006662 545 ADSIFSLYKD--------RCEMEDVLLEMDRILRPEGSVIIRDD-VDILVKIKSITDGMEWEGRIAD-HENGPRQREKIL 614 (636)
Q Consensus 545 ~~~~fs~~~~--------~c~~~~~l~e~dRiLrPgG~~i~~d~-~~~~~~~~~~~~~~~W~~~~~~-~e~~~~~~~~~l 614 (636)
++.-...... ....+.+|.++-|+|||||.+++..- .+....+...++..==++.++. ..+-+...|..+
T Consensus 97 sd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~~~~~~~~~~l~~~F~~v~~~kP~asR~~s~E~y~ 176 (191)
T 3dou_A 97 SDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQGDMTNDFIAIWRKNFSSYKISKPPASRGSSSEIYI 176 (191)
T ss_dssp ECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTHHHHHHHHHGGGEEEEEEECC------CCEEEE
T ss_pred cCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCCCCHHHHHHHHHHhcCEEEEECCCCccCCCceEEE
Confidence 8764332111 11234788899999999999998631 1223344444444322233322 222334579999
Q ss_pred EEEec
Q 006662 615 FANKK 619 (636)
Q Consensus 615 ~~~K~ 619 (636)
||++.
T Consensus 177 v~~~~ 181 (191)
T 3dou_A 177 MFFGF 181 (191)
T ss_dssp EEEEE
T ss_pred EEeee
Confidence 99763
No 415
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=97.98 E-value=2.1e-05 Score=84.85 Aligned_cols=113 Identities=9% Similarity=-0.005 Sum_probs=77.2
Q ss_pred HHHHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhc--C--------------------------------------CE
Q 006662 203 AYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR--N--------------------------------------IL 242 (636)
Q Consensus 203 ~~id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~--~--------------------------------------v~ 242 (636)
.+...+..+....++. .|||.+||+|.++..++.. + ..
T Consensus 188 ~lAa~ll~l~~~~~~~--~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~ 265 (393)
T 3k0b_A 188 TMAAALVLLTSWHPDR--PFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLN 265 (393)
T ss_dssp HHHHHHHHHSCCCTTS--CEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCC
T ss_pred HHHHHHHHHhCCCCCC--eEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCce
Confidence 3444555555544444 8999999999998887764 2 23
Q ss_pred EEEcCcCCchHHHHHHHHHc----CC--CeEEEEeccccCCCCCCCeeEEEeccccccccc---ChHHHHHHHHhcccC-
Q 006662 243 AVSFAPRDTHEAQVQFALER----GV--PALIGVMASIRLPYPSRAFDMAHCSRCLIPWGQ---YDGLYLIEVDRVLRP- 312 (636)
Q Consensus 243 vv~i~p~Dis~a~l~~A~er----g~--~~~~~~~d~~~Lpf~~~sFDlV~~s~~L~h~~~---d~~~~L~el~RvLKP- 312 (636)
++++ |+++.+++.|+++ ++ .+.+.+.|...++.+ .+||+|+++.-+..-.. +...+..++.++||+
T Consensus 266 V~Gv---Did~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~~-~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~ 341 (393)
T 3k0b_A 266 IIGG---DIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQTE-DEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRM 341 (393)
T ss_dssp EEEE---ESCHHHHHHHHHHHHHTTCTTCSEEEECCGGGCCCC-CCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTC
T ss_pred EEEE---ECCHHHHHHHHHHHHHcCCCCceEEEECChHhCCCC-CCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcC
Confidence 4555 8899999888754 44 378999999888765 48999999864421111 124466666667766
Q ss_pred -CcEEEEEeC
Q 006662 313 -GGYWILSGP 321 (636)
Q Consensus 313 -GG~Liis~p 321 (636)
||.+++.++
T Consensus 342 ~g~~~~iit~ 351 (393)
T 3k0b_A 342 PTWSVYVLTS 351 (393)
T ss_dssp TTCEEEEEEC
T ss_pred CCCEEEEEEC
Confidence 888888765
No 416
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=97.98 E-value=9e-06 Score=85.60 Aligned_cols=140 Identities=19% Similarity=0.239 Sum_probs=87.0
Q ss_pred CCcceEeeecccchhhhhhhcCC--CeEEEEecCCCCCccchHHHHhh----cccchhhccc-cccCCCCCccceeeecc
Q 006662 475 GRYRNLLDMNAYLGGFAAALVDD--PLWVMNTVPVEAKINTLGVIYER----GLIGTYQNWC-EAMSTYPRTYDLIHADS 547 (636)
Q Consensus 475 ~~~r~vlD~~~g~ggfaa~l~~~--~v~~mnv~~~~~~~~~l~~~~eR----gli~~~~~~c-e~~~~yp~t~Dl~H~~~ 547 (636)
....+|||+|||.|.++.+|++. ++ .++..|. +.++..+.++ |+-+-+.-.+ ..+..+|..||+|.+..
T Consensus 182 ~~~~~vLDvG~G~G~~~~~l~~~~~~~---~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~D~v~~~~ 257 (360)
T 1tw3_A 182 TNVRHVLDVGGGKGGFAAAIARRAPHV---SATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFEPLPRKADAIILSF 257 (360)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTC---EEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTSCCSSCEEEEEEES
T ss_pred ccCcEEEEeCCcCcHHHHHHHHhCCCC---EEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCCCCCCccEEEEcc
Confidence 44679999999999999998764 33 2333444 3677766653 4421111111 22345676799999988
Q ss_pred ccccCCCCcCHHHHHHHHhhcccCCcEEEEEeCH--------H------------------HHHHHHHHHhcCCCceEEe
Q 006662 548 IFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDDV--------D------------------ILVKIKSITDGMEWEGRIA 601 (636)
Q Consensus 548 ~fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~~--------~------------------~~~~~~~~~~~~~W~~~~~ 601 (636)
++..+.+. +...+|-++-|+|+|||+++|.|.. . ....++++++.-.++....
T Consensus 258 vl~~~~~~-~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~ 336 (360)
T 1tw3_A 258 VLLNWPDH-DAVRILTRCAEALEPGGRILIHERDDLHENSFNEQFTELDLRMLVFLGGALRTREKWDGLAASAGLVVEEV 336 (360)
T ss_dssp CGGGSCHH-HHHHHHHHHHHTEEEEEEEEEEECCBCGGGCCSHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEEEEEE
T ss_pred cccCCCHH-HHHHHHHHHHHhcCCCcEEEEEEEeccCCCCCcchhhhccHHHhhhcCCcCCCHHHHHHHHHHCCCeEEEE
Confidence 87654321 2357999999999999999998644 0 1245566666667766533
Q ss_pred ccCCCC--CCcceEEEEEec
Q 006662 602 DHENGP--RQREKILFANKK 619 (636)
Q Consensus 602 ~~e~~~--~~~~~~l~~~K~ 619 (636)
..-.++ .-...++.++|+
T Consensus 337 ~~~~~~~~~~~~~~i~~~~~ 356 (360)
T 1tw3_A 337 RQLPSPTIPYDLSLLVLAPA 356 (360)
T ss_dssp EEEECSSSSCEEEEEEEEEC
T ss_pred EeCCCCcccCccEEEEEEeC
Confidence 222111 011568888884
No 417
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=97.97 E-value=4.2e-05 Score=82.36 Aligned_cols=113 Identities=13% Similarity=0.041 Sum_probs=78.8
Q ss_pred HHHHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhc--C--------------------------------------CE
Q 006662 203 AYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR--N--------------------------------------IL 242 (636)
Q Consensus 203 ~~id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~--~--------------------------------------v~ 242 (636)
.+...+..+....++. .+||.+||+|.++...+.. + ..
T Consensus 181 ~LAaall~l~~~~~~~--~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~ 258 (384)
T 3ldg_A 181 NMAAAIILLSNWFPDK--PFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLD 258 (384)
T ss_dssp HHHHHHHHHTTCCTTS--CEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCC
T ss_pred HHHHHHHHHhCCCCCC--eEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCce
Confidence 3444455555444444 8999999999999887754 2 23
Q ss_pred EEEcCcCCchHHHHHHHHHc----CC--CeEEEEeccccCCCCCCCeeEEEecccccccccC---hHHHHHHHHhcccC-
Q 006662 243 AVSFAPRDTHEAQVQFALER----GV--PALIGVMASIRLPYPSRAFDMAHCSRCLIPWGQY---DGLYLIEVDRVLRP- 312 (636)
Q Consensus 243 vv~i~p~Dis~a~l~~A~er----g~--~~~~~~~d~~~Lpf~~~sFDlV~~s~~L~h~~~d---~~~~L~el~RvLKP- 312 (636)
++++ |+++.+++.|+++ ++ .+.+.+.|...++.+ .+||+|+++.-+..-..+ ...++.++.+.||+
T Consensus 259 v~Gv---Did~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~~~-~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~ 334 (384)
T 3ldg_A 259 ISGF---DFDGRMVEIARKNAREVGLEDVVKLKQMRLQDFKTN-KINGVLISNPPYGERLLDDKAVDILYNEMGETFAPL 334 (384)
T ss_dssp EEEE---ESCHHHHHHHHHHHHHTTCTTTEEEEECCGGGCCCC-CCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTC
T ss_pred EEEE---ECCHHHHHHHHHHHHHcCCCCceEEEECChHHCCcc-CCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhC
Confidence 4555 8899999888754 44 378999999888765 489999998644222222 25667777777776
Q ss_pred -CcEEEEEeC
Q 006662 313 -GGYWILSGP 321 (636)
Q Consensus 313 -GG~Liis~p 321 (636)
||.+++.++
T Consensus 335 ~g~~~~iit~ 344 (384)
T 3ldg_A 335 KTWSQFILTN 344 (384)
T ss_dssp TTSEEEEEES
T ss_pred CCcEEEEEEC
Confidence 998888865
No 418
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=97.97 E-value=7e-06 Score=86.19 Aligned_cols=143 Identities=15% Similarity=0.167 Sum_probs=90.5
Q ss_pred HhhhccCCCCC-cceEeeecccchhhhhhhcCC--CeEEEEecCCCCCccchHHHHhh----cccc---hh-hccccccC
Q 006662 466 SVDYQLAQPGR-YRNLLDMNAYLGGFAAALVDD--PLWVMNTVPVEAKINTLGVIYER----GLIG---TY-QNWCEAMS 534 (636)
Q Consensus 466 ~~~~~l~~~~~-~r~vlD~~~g~ggfaa~l~~~--~v~~mnv~~~~~~~~~l~~~~eR----gli~---~~-~~~ce~~~ 534 (636)
.++..+.. .. ..+|||+|||.|.++.+|++. ++ .++-.|.+ .++..+.++ |+-. .. +|..+.-.
T Consensus 169 ~~l~~~~~-~~~~~~vlDvG~G~G~~~~~l~~~~p~~---~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 243 (352)
T 3mcz_A 169 DVVSELGV-FARARTVIDLAGGHGTYLAQVLRRHPQL---TGQIWDLP-TTRDAARKTIHAHDLGGRVEFFEKNLLDARN 243 (352)
T ss_dssp HHHHTCGG-GTTCCEEEEETCTTCHHHHHHHHHCTTC---EEEEEECG-GGHHHHHHHHHHTTCGGGEEEEECCTTCGGG
T ss_pred HHHHhCCC-cCCCCEEEEeCCCcCHHHHHHHHhCCCC---eEEEEECH-HHHHHHHHHHHhcCCCCceEEEeCCcccCcc
Confidence 44444544 34 789999999999999999764 33 22333443 566665543 5422 11 12222111
Q ss_pred CCCCccceeeeccccccCCCCcCHHHHHHHHhhcccCCcEEEEEeCH----------H-----------------HHHHH
Q 006662 535 TYPRTYDLIHADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDDV----------D-----------------ILVKI 587 (636)
Q Consensus 535 ~yp~t~Dl~H~~~~fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~~----------~-----------------~~~~~ 587 (636)
..|..||+|.+.+++..+.+ -+...+|-++-|+|||||.++|.|.. . ....+
T Consensus 244 ~~~~~~D~v~~~~vlh~~~~-~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~ 322 (352)
T 3mcz_A 244 FEGGAADVVMLNDCLHYFDA-REAREVIGHAAGLVKPGGALLILTMTMNDDRVTPALSADFSLHMMVNTNHGELHPTPWI 322 (352)
T ss_dssp GTTCCEEEEEEESCGGGSCH-HHHHHHHHHHHHTEEEEEEEEEEEECCCTTSSSSHHHHHHHHHHHHHSTTCCCCCHHHH
T ss_pred cCCCCccEEEEecccccCCH-HHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCCchHHHhhHHHHhhCCCCCcCCHHHH
Confidence 15678999999888875532 23578999999999999999997520 0 12345
Q ss_pred HHHHhcCCCceEEeccCCCCCCcceEEEEEec
Q 006662 588 KSITDGMEWEGRIADHENGPRQREKILFANKK 619 (636)
Q Consensus 588 ~~~~~~~~W~~~~~~~e~~~~~~~~~l~~~K~ 619 (636)
+++++.-.++..... .+...+++++|+
T Consensus 323 ~~ll~~aGf~~~~~~-----~g~~~l~~a~kp 349 (352)
T 3mcz_A 323 AGVVRDAGLAVGERS-----IGRYTLLIGQRS 349 (352)
T ss_dssp HHHHHHTTCEEEEEE-----ETTEEEEEEECC
T ss_pred HHHHHHCCCceeeec-----cCceEEEEEecC
Confidence 566666666655421 235788999986
No 419
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=97.97 E-value=5.3e-06 Score=87.49 Aligned_cols=132 Identities=14% Similarity=0.074 Sum_probs=83.3
Q ss_pred cceEeeecccchhhhhhhcCCC-eEEEEecCCCCCccchHHHHhh----cccchhhccccccCCCCCccceeeecccccc
Q 006662 477 YRNLLDMNAYLGGFAAALVDDP-LWVMNTVPVEAKINTLGVIYER----GLIGTYQNWCEAMSTYPRTYDLIHADSIFSL 551 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~~~-v~~mnv~~~~~~~~~l~~~~eR----gli~~~~~~ce~~~~yp~t~Dl~H~~~~fs~ 551 (636)
..+|||+|||.|.++.+|++.. - .+|+.+|.+..++..+.++ |+-..+ .+...+...+.+||+|-++..|..
T Consensus 197 ~~~VLDlGcG~G~~~~~la~~~~~--~~v~~vD~s~~~l~~a~~~~~~~~~~~~~-~~~d~~~~~~~~fD~Iv~~~~~~~ 273 (343)
T 2pjd_A 197 KGKVLDVGCGAGVLSVAFARHSPK--IRLTLCDVSAPAVEASRATLAANGVEGEV-FASNVFSEVKGRFDMIISNPPFHD 273 (343)
T ss_dssp CSBCCBTTCTTSHHHHHHHHHCTT--CBCEEEESBHHHHHHHHHHHHHTTCCCEE-EECSTTTTCCSCEEEEEECCCCCS
T ss_pred CCeEEEecCccCHHHHHHHHHCCC--CEEEEEECCHHHHHHHHHHHHHhCCCCEE-EEccccccccCCeeEEEECCCccc
Confidence 3479999999999999987652 1 1456667766677776654 332111 122233323589999999888764
Q ss_pred CC--CCcCHHHHHHHHhhcccCCcEEEEEeCH--HHHHHHHHHHhcCCCceEEeccCCCCCCcceEEEEEec
Q 006662 552 YK--DRCEMEDVLLEMDRILRPEGSVIIRDDV--DILVKIKSITDGMEWEGRIADHENGPRQREKILFANKK 619 (636)
Q Consensus 552 ~~--~~c~~~~~l~e~dRiLrPgG~~i~~d~~--~~~~~~~~~~~~~~W~~~~~~~e~~~~~~~~~l~~~K~ 619 (636)
.. +.-..+.+|.++.|+|||||.+++.... ..-..++++.... +... .+ .+-+|+-++|.
T Consensus 274 g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~l~~~f~~~--~~~~--~~----~gf~v~~~~k~ 337 (343)
T 2pjd_A 274 GMQTSLDAAQTLIRGAVRHLNSGGELRIVANAFLPYPDVLDETFGFH--EVIA--QT----GRFKVYRAIMT 337 (343)
T ss_dssp SSHHHHHHHHHHHHHHGGGEEEEEEEEEEEETTSSHHHHHHHHHSCC--EEEE--EC----SSEEEEEEEC-
T ss_pred CccCCHHHHHHHHHHHHHhCCCCcEEEEEEcCCCCcHHHHHHhcCce--EEEe--eC----CCEEEEEEEeC
Confidence 21 1224578999999999999999997543 2334455555432 2222 11 35677777663
No 420
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=97.97 E-value=1.4e-05 Score=92.93 Aligned_cols=101 Identities=12% Similarity=0.154 Sum_probs=72.2
Q ss_pred cceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhh----------cc--cchhhccccccCCCCCccceee
Q 006662 477 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----------GL--IGTYQNWCEAMSTYPRTYDLIH 544 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----------gl--i~~~~~~ce~~~~yp~t~Dl~H 544 (636)
..+|||+|||.|.++.+|++..--...|+.+|.++.++..+.+| |+ +-.++.=.+.+...+.+||+|.
T Consensus 722 g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~~d~sFDlVV 801 (950)
T 3htx_A 722 ASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDSRLHDVDIGT 801 (950)
T ss_dssp CSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCTTSCSCCEEE
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCcccCCeeEEE
Confidence 57899999999999999998741113677778888899988773 44 2233211122333348999999
Q ss_pred eccccccCCCCcCHHHHHHHHhhcccCCcEEEEEe
Q 006662 545 ADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRD 579 (636)
Q Consensus 545 ~~~~fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d 579 (636)
+..+|....+. ....++-|+-|+|||| .+||+.
T Consensus 802 ~~eVLeHL~dp-~l~~~L~eI~RvLKPG-~LIIST 834 (950)
T 3htx_A 802 CLEVIEHMEED-QACEFGEKVLSLFHPK-LLIVST 834 (950)
T ss_dssp EESCGGGSCHH-HHHHHHHHHHHTTCCS-EEEEEE
T ss_pred EeCchhhCChH-HHHHHHHHHHHHcCCC-EEEEEe
Confidence 98888765432 2346889999999999 888864
No 421
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=97.96 E-value=9.1e-06 Score=79.60 Aligned_cols=129 Identities=16% Similarity=0.090 Sum_probs=81.4
Q ss_pred cceEeeecccchhhhhhhcCC-C-eEEEEecCCCCCccchHHHHhh----cc---cchhh-ccccccCCCC-----Cccc
Q 006662 477 YRNLLDMNAYLGGFAAALVDD-P-LWVMNTVPVEAKINTLGVIYER----GL---IGTYQ-NWCEAMSTYP-----RTYD 541 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~~-~-v~~mnv~~~~~~~~~l~~~~eR----gl---i~~~~-~~ce~~~~yp-----~t~D 541 (636)
..+|||+|||.|.++.+|++. + - ..|+.+|.++.++..+.++ |+ +-+++ |..+.+...+ .+||
T Consensus 70 ~~~vLdiG~G~G~~~~~la~~~~~~--~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D 147 (229)
T 2avd_A 70 AKKALDLGTFTGYSALALALALPAD--GRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTFD 147 (229)
T ss_dssp CCEEEEECCTTSHHHHHHHTTSCTT--CEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCEE
T ss_pred CCEEEEEcCCccHHHHHHHHhCCCC--CEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCcc
Confidence 468999999999999999874 1 1 2445556665677777654 54 22222 2222222222 6899
Q ss_pred eeeeccccccCCCCcCHHHHHHHHhhcccCCcEEEEEeC------------HHHHHHHHH----HHhcCCCceEEeccCC
Q 006662 542 LIHADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDD------------VDILVKIKS----ITDGMEWEGRIADHEN 605 (636)
Q Consensus 542 l~H~~~~fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~------------~~~~~~~~~----~~~~~~W~~~~~~~e~ 605 (636)
+|.++.. ......++-++-|+|||||.+++.+. ......+++ +...-+++..+...
T Consensus 148 ~v~~d~~------~~~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~-- 219 (229)
T 2avd_A 148 VAVVDAD------KENCSAYYERCLQLLRPGGILAVLRVLWRGKVLQPPKGDVAAECVRNLNERIRRDVRVYISLLPL-- 219 (229)
T ss_dssp EEEECSC------STTHHHHHHHHHHHEEEEEEEEEECCSGGGGGGSCCTTCHHHHHHHHHHHHHHHCTTEEEEEECS--
T ss_pred EEEECCC------HHHHHHHHHHHHHHcCCCeEEEEECCCcCCcccCcccCChHHHHHHHHHHHHhhCCCEEEEEEec--
Confidence 9988543 34567899999999999999999532 112233333 34455666666533
Q ss_pred CCCCcceEEEEEec
Q 006662 606 GPRQREKILFANKK 619 (636)
Q Consensus 606 ~~~~~~~~l~~~K~ 619 (636)
.+.+++++|.
T Consensus 220 ----~dGl~~~~k~ 229 (229)
T 2avd_A 220 ----GDGLTLAFKI 229 (229)
T ss_dssp ----TTCEEEEEEC
T ss_pred ----CCceEEEEEC
Confidence 3578888873
No 422
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=97.95 E-value=6.2e-06 Score=80.02 Aligned_cols=94 Identities=16% Similarity=0.111 Sum_probs=64.5
Q ss_pred cceEeeecccchhhhhhhcCC-C-eEEEEecCCCCCccchHHHHhh----cc---cchhh-ccccccCCCCCccceeeec
Q 006662 477 YRNLLDMNAYLGGFAAALVDD-P-LWVMNTVPVEAKINTLGVIYER----GL---IGTYQ-NWCEAMSTYPRTYDLIHAD 546 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~~-~-v~~mnv~~~~~~~~~l~~~~eR----gl---i~~~~-~~ce~~~~yp~t~Dl~H~~ 546 (636)
..+|||+|||.|.++.+|++. + - -.|+.+|.++.++..+.++ |+ +-+++ |..+.+...+. ||+|.++
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~~ 133 (210)
T 3c3p_A 57 PQLVVVPGDGLGCASWWFARAISIS--SRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRD-IDILFMD 133 (210)
T ss_dssp CSEEEEESCGGGHHHHHHHTTSCTT--CEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCS-EEEEEEE
T ss_pred CCEEEEEcCCccHHHHHHHHhCCCC--CEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCC-CCEEEEc
Confidence 468999999999999999865 1 1 2445556666677776543 44 22222 33233334457 9999875
Q ss_pred cccccCCCCcCHHHHHHHHhhcccCCcEEEEEe
Q 006662 547 SIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRD 579 (636)
Q Consensus 547 ~~fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d 579 (636)
. .....+.++-++-|+|||||.+++.+
T Consensus 134 ~------~~~~~~~~l~~~~~~LkpgG~lv~~~ 160 (210)
T 3c3p_A 134 C------DVFNGADVLERMNRCLAKNALLIAVN 160 (210)
T ss_dssp T------TTSCHHHHHHHHGGGEEEEEEEEEES
T ss_pred C------ChhhhHHHHHHHHHhcCCCeEEEEEC
Confidence 2 23467899999999999999999854
No 423
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=97.94 E-value=8e-06 Score=86.04 Aligned_cols=105 Identities=15% Similarity=0.244 Sum_probs=66.0
Q ss_pred hhccCCCCCcceEeeecccchhhhhhhcCC--CeEEEEecCCCCCccchH--HHHhhcccchhhccc-cccCCCCCccce
Q 006662 468 DYQLAQPGRYRNLLDMNAYLGGFAAALVDD--PLWVMNTVPVEAKINTLG--VIYERGLIGTYQNWC-EAMSTYPRTYDL 542 (636)
Q Consensus 468 ~~~l~~~~~~r~vlD~~~g~ggfaa~l~~~--~v~~mnv~~~~~~~~~l~--~~~eRgli~~~~~~c-e~~~~yp~t~Dl 542 (636)
+..+.. ....+|||+|||.|.++.+|++. ++ .++..|.+ ..+. .+.+.|+-+-+.--+ ..|...| +||+
T Consensus 177 ~~~~~~-~~~~~vLDvG~G~G~~~~~l~~~~p~~---~~~~~D~~-~~~~~~~~~~~~~~~~v~~~~~d~~~~~p-~~D~ 250 (348)
T 3lst_A 177 ARAGDF-PATGTVADVGGGRGGFLLTVLREHPGL---QGVLLDRA-EVVARHRLDAPDVAGRWKVVEGDFLREVP-HADV 250 (348)
T ss_dssp HHHSCC-CSSEEEEEETCTTSHHHHHHHHHCTTE---EEEEEECH-HHHTTCCCCCGGGTTSEEEEECCTTTCCC-CCSE
T ss_pred HHhCCc-cCCceEEEECCccCHHHHHHHHHCCCC---EEEEecCH-HHhhcccccccCCCCCeEEEecCCCCCCC-CCcE
Confidence 333444 56889999999999999999763 33 22333433 2222 001123322111111 2335678 9999
Q ss_pred eeeccccccCCCCcCHHHHHHHHhhcccCCcEEEEEe
Q 006662 543 IHADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRD 579 (636)
Q Consensus 543 ~H~~~~fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d 579 (636)
|.+..++-.+.+. +...+|-++-|+|||||.++|.|
T Consensus 251 v~~~~vlh~~~d~-~~~~~L~~~~~~LkpgG~l~i~e 286 (348)
T 3lst_A 251 HVLKRILHNWGDE-DSVRILTNCRRVMPAHGRVLVID 286 (348)
T ss_dssp EEEESCGGGSCHH-HHHHHHHHHHHTCCTTCEEEEEE
T ss_pred EEEehhccCCCHH-HHHHHHHHHHHhcCCCCEEEEEE
Confidence 9998877654321 23589999999999999999975
No 424
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=97.93 E-value=1e-05 Score=83.06 Aligned_cols=139 Identities=16% Similarity=0.063 Sum_probs=83.1
Q ss_pred cceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhh-----cc-----------cchhh-ccccccCCCCCc
Q 006662 477 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER-----GL-----------IGTYQ-NWCEAMSTYPRT 539 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR-----gl-----------i~~~~-~~ce~~~~yp~t 539 (636)
.++|||+|||.|+++.+|++.+. .+|+-+|..+..+..+.++ |+ +-+++ |..+.... +.+
T Consensus 76 ~~~VLdiG~G~G~~~~~l~~~~~--~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~~~ 152 (281)
T 1mjf_A 76 PKRVLVIGGGDGGTVREVLQHDV--DEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-NRG 152 (281)
T ss_dssp CCEEEEEECTTSHHHHHHTTSCC--SEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-CCC
T ss_pred CCeEEEEcCCcCHHHHHHHhCCC--CEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhcc-cCC
Confidence 47899999999999999988854 4566666666788777665 32 11111 11111122 678
Q ss_pred cceeeeccccccCCCCc-CHHHHHHHHhhcccCCcEEEEEe-----CHHHHHHHHHHHhcCCCceEEecc--CCCCCCcc
Q 006662 540 YDLIHADSIFSLYKDRC-EMEDVLLEMDRILRPEGSVIIRD-----DVDILVKIKSITDGMEWEGRIADH--ENGPRQRE 611 (636)
Q Consensus 540 ~Dl~H~~~~fs~~~~~c-~~~~~l~e~dRiLrPgG~~i~~d-----~~~~~~~~~~~~~~~~W~~~~~~~--e~~~~~~~ 611 (636)
||+|-++.........- ....++-++-|+|+|||.+++.. ..+.+..+.+.++..--.+..... ..+ .+..
T Consensus 153 fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~f~~v~~~~~~vP~~-~g~~ 231 (281)
T 1mjf_A 153 FDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQAGSVYLFTDELISAYKEMKKVFDRVYYYSFPVIGY-ASPW 231 (281)
T ss_dssp EEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEEEETTTSHHHHHHHHHHHHHHCSEEEEEEECCTTS-SSSE
T ss_pred eeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHHCCceEEEEEecCCC-CceE
Confidence 99999864422111111 12678999999999999999962 234444444444433233332211 111 2346
Q ss_pred eEEEEEec
Q 006662 612 KILFANKK 619 (636)
Q Consensus 612 ~~l~~~K~ 619 (636)
.+++|.|.
T Consensus 232 ~~~~as~~ 239 (281)
T 1mjf_A 232 AFLVGVKG 239 (281)
T ss_dssp EEEEEEES
T ss_pred EEEEeeCC
Confidence 78899886
No 425
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=97.93 E-value=2e-06 Score=89.82 Aligned_cols=98 Identities=13% Similarity=0.054 Sum_probs=57.4
Q ss_pred cceEeeecccchhhhhhhcCC-CeEEEEecCCCCCccchHHHH-h-hcc--cchhhcccc-ccCCC-CCccceeeecccc
Q 006662 477 YRNLLDMNAYLGGFAAALVDD-PLWVMNTVPVEAKINTLGVIY-E-RGL--IGTYQNWCE-AMSTY-PRTYDLIHADSIF 549 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~~-~v~~mnv~~~~~~~~~l~~~~-e-Rgl--i~~~~~~ce-~~~~y-p~t~Dl~H~~~~f 549 (636)
..+|||+|||.|+|..+|+++ .|..+-+.....+ .++..+. + .|. +-+.. . .+... +.+||+|.|+..|
T Consensus 83 g~~VLDlGcG~G~~s~~la~~~~V~gvD~~~~~~~-~~~~~~~~~~~~~~~v~~~~---~~D~~~l~~~~fD~V~sd~~~ 158 (305)
T 2p41_A 83 EGKVVDLGCGRGGWSYYCGGLKNVREVKGLTKGGP-GHEEPIPMSTYGWNLVRLQS---GVDVFFIPPERCDTLLCDIGE 158 (305)
T ss_dssp CEEEEEETCTTSHHHHHHHTSTTEEEEEEECCCST-TSCCCCCCCSTTGGGEEEEC---SCCTTTSCCCCCSEEEECCCC
T ss_pred CCEEEEEcCCCCHHHHHHHhcCCEEEEeccccCch-hHHHHHHhhhcCCCCeEEEe---ccccccCCcCCCCEEEECCcc
Confidence 579999999999999999887 3544433111111 1111110 1 111 11221 2 23333 4789999998877
Q ss_pred ccCCCCcC---HHHHHHHHhhcccCCcEEEEE
Q 006662 550 SLYKDRCE---MEDVLLEMDRILRPEGSVIIR 578 (636)
Q Consensus 550 s~~~~~c~---~~~~l~e~dRiLrPgG~~i~~ 578 (636)
+....--+ ...+|.++.|+|||||.|++.
T Consensus 159 ~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~k 190 (305)
T 2p41_A 159 SSPNPTVEAGRTLRVLNLVENWLSNNTQFCVK 190 (305)
T ss_dssp CCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred ccCcchhhHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 52111001 114788899999999999996
No 426
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=97.93 E-value=6e-06 Score=80.40 Aligned_cols=119 Identities=14% Similarity=0.086 Sum_probs=73.4
Q ss_pred CcceEeeecccchhhhhhhcCCC-eEEEEecCCCCCccchHHHH--------hhcc--cchhhccccccCCCC-Ccccee
Q 006662 476 RYRNLLDMNAYLGGFAAALVDDP-LWVMNTVPVEAKINTLGVIY--------ERGL--IGTYQNWCEAMSTYP-RTYDLI 543 (636)
Q Consensus 476 ~~r~vlD~~~g~ggfaa~l~~~~-v~~mnv~~~~~~~~~l~~~~--------eRgl--i~~~~~~ce~~~~yp-~t~Dl~ 543 (636)
...+|||+|||.|.++.+|++.. - -+|+.+|.++.++..+. .+|+ +-..+.=.+.++ ++ .+ |.+
T Consensus 27 ~~~~vLDiGcG~G~~~~~la~~~p~--~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~-~~~~~-d~v 102 (218)
T 3mq2_A 27 YDDVVLDVGTGDGKHPYKVARQNPS--RLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLP-PLSGV-GEL 102 (218)
T ss_dssp SSEEEEEESCTTCHHHHHHHHHCTT--EEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCC-SCCCE-EEE
T ss_pred CCCEEEEecCCCCHHHHHHHHHCCC--CEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCC-CCCCC-CEE
Confidence 36789999999999999998761 1 35677777777887532 2444 222221112222 33 44 766
Q ss_pred eeccccccCC----CCcCHHHHHHHHhhcccCCcEEEEEeC------------------HH-HHHHHHHHHhcCCCceEE
Q 006662 544 HADSIFSLYK----DRCEMEDVLLEMDRILRPEGSVIIRDD------------------VD-ILVKIKSITDGMEWEGRI 600 (636)
Q Consensus 544 H~~~~fs~~~----~~c~~~~~l~e~dRiLrPgG~~i~~d~------------------~~-~~~~~~~~~~~~~W~~~~ 600 (636)
.. +|+... +.-+.+.+|-|+-|+|||||.+++... .. ..+.+.+++..-.|++.-
T Consensus 103 ~~--~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~i~~ 180 (218)
T 3mq2_A 103 HV--LMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVALNLHAWRPSVPEVGEHPEPTPDSADEWLAPRYAEAGWKLAD 180 (218)
T ss_dssp EE--ESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEEEGGGBTTBCGGGTTCCCCCHHHHHHHHHHHHHHTTEEEEE
T ss_pred EE--EccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEeccccccccccccccCCccchHHHHHHHHHHHHHcCCCcee
Confidence 62 232100 011126899999999999999999621 12 233477778877887653
No 427
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=97.92 E-value=2.2e-05 Score=84.30 Aligned_cols=93 Identities=14% Similarity=0.067 Sum_probs=68.4
Q ss_pred cEEEEeCCCCcHHHHHHhhc-C-CEEEEcCcCCchHHHHHHHHHc-------------------CCC-eEEEEeccccCC
Q 006662 220 RTAIDTGCGVASWGAYLMSR-N-ILAVSFAPRDTHEAQVQFALER-------------------GVP-ALIGVMASIRLP 277 (636)
Q Consensus 220 r~VLDIGCGtG~~a~~La~~-~-v~vv~i~p~Dis~a~l~~A~er-------------------g~~-~~~~~~d~~~Lp 277 (636)
.+|||+|||+|.++..++++ + ..++.+ |+++.+++.++++ +.. +.+...|...+.
T Consensus 49 ~~VLDl~aGtG~~~l~~a~~~~~~~V~av---Di~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~ 125 (378)
T 2dul_A 49 KIVLDALSATGIRGIRFALETPAEEVWLN---DISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLM 125 (378)
T ss_dssp SEEEESSCTTSHHHHHHHHHSSCSEEEEE---ESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHH
T ss_pred CEEEECCCchhHHHHHHHHhCCCCeEEEE---ECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHH
Confidence 48999999999999999987 3 455555 8888888877643 443 667777765432
Q ss_pred C-CCCCeeEEEecccccccccChHHHHHHHHhcccCCcEEEEEe
Q 006662 278 Y-PSRAFDMAHCSRCLIPWGQYDGLYLIEVDRVLRPGGYWILSG 320 (636)
Q Consensus 278 f-~~~sFDlV~~s~~L~h~~~d~~~~L~el~RvLKPGG~Liis~ 320 (636)
. ..+.||+|+..- . .....++..+.+.|||||+++++.
T Consensus 126 ~~~~~~fD~I~lDP----~-~~~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 126 AERHRYFHFIDLDP----F-GSPMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp HHSTTCEEEEEECC----S-SCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred HhccCCCCEEEeCC----C-CCHHHHHHHHHHhcCCCCEEEEEe
Confidence 1 135799999532 1 133688999999999999988875
No 428
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=97.92 E-value=1.6e-05 Score=81.37 Aligned_cols=102 Identities=11% Similarity=0.021 Sum_probs=71.9
Q ss_pred CcceEeeecccc---hhhhhhhcCC-CeEEEEecCCCCCccchHHHHhhc----ccchhh-ccccc-----c----CCCC
Q 006662 476 RYRNLLDMNAYL---GGFAAALVDD-PLWVMNTVPVEAKINTLGVIYERG----LIGTYQ-NWCEA-----M----STYP 537 (636)
Q Consensus 476 ~~r~vlD~~~g~---ggfaa~l~~~-~v~~mnv~~~~~~~~~l~~~~eRg----li~~~~-~~ce~-----~----~~yp 537 (636)
.++.|||+|||+ |.+...+... += ..|+.+|.++.++..+.++- -+..++ |..+. . ..+|
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p~--~~v~~vD~sp~~l~~Ar~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~d 154 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNPD--ARVVYVDIDPMVLTHGRALLAKDPNTAVFTADVRDPEYILNHPDVRRMID 154 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCTT--CEEEEEESSHHHHHHHHHHHTTCTTEEEEECCTTCHHHHHHSHHHHHHCC
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCCC--CEEEEEECChHHHHHHHHhcCCCCCeEEEEeeCCCchhhhccchhhccCC
Confidence 478999999999 9887665432 21 25677788778888887762 122221 22110 0 1354
Q ss_pred -CccceeeeccccccCCCCcCHHHHHHHHhhcccCCcEEEEEeC
Q 006662 538 -RTYDLIHADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDD 580 (636)
Q Consensus 538 -~t~Dl~H~~~~fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~ 580 (636)
.+||+|-+.++|-...+. +...+|-|+-|+|||||+++|.+.
T Consensus 155 ~~~~d~v~~~~vlh~~~d~-~~~~~l~~~~~~L~pGG~l~i~~~ 197 (274)
T 2qe6_A 155 FSRPAAIMLVGMLHYLSPD-VVDRVVGAYRDALAPGSYLFMTSL 197 (274)
T ss_dssp TTSCCEEEETTTGGGSCTT-THHHHHHHHHHHSCTTCEEEEEEE
T ss_pred CCCCEEEEEechhhhCCcH-HHHHHHHHHHHhCCCCcEEEEEEe
Confidence 589999888888776655 788999999999999999999864
No 429
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=97.91 E-value=1.8e-05 Score=79.44 Aligned_cols=130 Identities=12% Similarity=0.107 Sum_probs=77.0
Q ss_pred cceEeeecccchhhhhhhcCC-----CeEEEEecCCCCCccchHHHHhhcc---cchhh-ccccccCCC-----CCccce
Q 006662 477 YRNLLDMNAYLGGFAAALVDD-----PLWVMNTVPVEAKINTLGVIYERGL---IGTYQ-NWCEAMSTY-----PRTYDL 542 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~~-----~v~~mnv~~~~~~~~~l~~~~eRgl---i~~~~-~~ce~~~~y-----p~t~Dl 542 (636)
.++|||+|||.|.++.+|++. .|+.+-+.|.-.. ...+.+-+.|+ |-+++ |..+.+..+ +.+||+
T Consensus 61 ~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~-~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD~ 139 (242)
T 3r3h_A 61 AKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTK-HAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFDF 139 (242)
T ss_dssp CSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCC-CSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEEE
T ss_pred cCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHH-HHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEeE
Confidence 569999999999999998762 2444444443222 22233333465 22222 222222333 478999
Q ss_pred eeeccccccCCCCcCHHHHHHHHhhcccCCcEEEEEeCH------------HHHHHHHHH----HhcCCCceEEeccCCC
Q 006662 543 IHADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDDV------------DILVKIKSI----TDGMEWEGRIADHENG 606 (636)
Q Consensus 543 ~H~~~~fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~~------------~~~~~~~~~----~~~~~W~~~~~~~e~~ 606 (636)
|.+++. .-....+|-++-|+|||||.+++.|-. .....++++ ...=+++..+...
T Consensus 140 V~~d~~------~~~~~~~l~~~~~~LkpGG~lv~d~~~~~g~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~--- 210 (242)
T 3r3h_A 140 IFIDAD------KTNYLNYYELALKLVTPKGLIAIDNIFWDGKVIDPNDTSGQTREIKKLNQVIKNDSRVFVSLLAI--- 210 (242)
T ss_dssp EEEESC------GGGHHHHHHHHHHHEEEEEEEEEECSSSSSCSSCTTCCCHHHHHHHHHHHHHHTCCSEEEEEESS---
T ss_pred EEEcCC------hHHhHHHHHHHHHhcCCCeEEEEECCccCCcccCccccChHHHHHHHHHHHHhhCCCEEEEEEEc---
Confidence 988653 223567889999999999999995321 122233333 3344565555422
Q ss_pred CCCcceEEEEEec
Q 006662 607 PRQREKILFANKK 619 (636)
Q Consensus 607 ~~~~~~~l~~~K~ 619 (636)
.+.+++++|+
T Consensus 211 ---~dG~~~~~k~ 220 (242)
T 3r3h_A 211 ---ADGMFLVQPI 220 (242)
T ss_dssp ---SSCEEEEEEC
T ss_pred ---cCceEEEEEc
Confidence 4678888873
No 430
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=97.91 E-value=1.1e-05 Score=79.72 Aligned_cols=104 Identities=13% Similarity=0.136 Sum_probs=74.0
Q ss_pred cceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhh----cc---cchhh-ccccccCCC-C-Cccceeeec
Q 006662 477 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GL---IGTYQ-NWCEAMSTY-P-RTYDLIHAD 546 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl---i~~~~-~~ce~~~~y-p-~t~Dl~H~~ 546 (636)
..+|||+|||.|.++.+|++. ..+|+.+|.++..+..+.++ |+ +...+ |+.+ .. + ..||+|-+
T Consensus 92 ~~~vldiG~G~G~~~~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~---~~~~~~~~D~v~~- 164 (248)
T 2yvl_A 92 EKRVLEFGTGSGALLAVLSEV---AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKD---AEVPEGIFHAAFV- 164 (248)
T ss_dssp TCEEEEECCTTSHHHHHHHHH---SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTT---SCCCTTCBSEEEE-
T ss_pred CCEEEEeCCCccHHHHHHHHh---CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhh---cccCCCcccEEEE-
Confidence 568999999999999999876 24667777777888888776 33 22222 2222 22 3 68999876
Q ss_pred cccccCCCCcCHHHHHHHHhhcccCCcEEEEEeC-HHHHHHHHHHHhcC
Q 006662 547 SIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDD-VDILVKIKSITDGM 594 (636)
Q Consensus 547 ~~fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~-~~~~~~~~~~~~~~ 594 (636)
+--+...+|-++-|+|||||.+++... .+.+.++.+.++..
T Consensus 165 -------~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~ 206 (248)
T 2yvl_A 165 -------DVREPWHYLEKVHKSLMEGAPVGFLLPTANQVIKLLESIENY 206 (248)
T ss_dssp -------CSSCGGGGHHHHHHHBCTTCEEEEEESSHHHHHHHHHHSTTT
T ss_pred -------CCcCHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhh
Confidence 223456889999999999999999876 45666666665554
No 431
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=97.90 E-value=1.1e-05 Score=85.05 Aligned_cols=102 Identities=15% Similarity=0.245 Sum_probs=69.4
Q ss_pred cCCCCCcceEeeecccchhhhhhhcCC--CeEEEEecCCCCCccchHHHHhh----cccchhhccccccC--CCCCccce
Q 006662 471 LAQPGRYRNLLDMNAYLGGFAAALVDD--PLWVMNTVPVEAKINTLGVIYER----GLIGTYQNWCEAMS--TYPRTYDL 542 (636)
Q Consensus 471 l~~~~~~r~vlD~~~g~ggfaa~l~~~--~v~~mnv~~~~~~~~~l~~~~eR----gli~~~~~~ce~~~--~yp~t~Dl 542 (636)
+.. ....+|||+|||.|.++.+|++. ++ .++.+|. +.++..+.++ |+-+-+.-.+..+. ++|. +|+
T Consensus 186 ~~~-~~~~~vLDvG~G~G~~~~~l~~~~p~~---~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~-~D~ 259 (359)
T 1x19_A 186 AKL-DGVKKMIDVGGGIGDISAAMLKHFPEL---DSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKESYPE-ADA 259 (359)
T ss_dssp CCC-TTCCEEEEESCTTCHHHHHHHHHCTTC---EEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSCCCC-CSE
T ss_pred cCC-CCCCEEEEECCcccHHHHHHHHHCCCC---eEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCCCCC-CCE
Confidence 444 45789999999999999999764 22 3344455 4777777765 55321111112222 3443 499
Q ss_pred eeeccccccCCCCcCHHHHHHHHhhcccCCcEEEEEe
Q 006662 543 IHADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRD 579 (636)
Q Consensus 543 ~H~~~~fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d 579 (636)
|.+..++..+.+ -....+|-++-|+|||||.++|.|
T Consensus 260 v~~~~vlh~~~d-~~~~~~l~~~~~~L~pgG~l~i~e 295 (359)
T 1x19_A 260 VLFCRILYSANE-QLSTIMCKKAFDAMRSGGRLLILD 295 (359)
T ss_dssp EEEESCGGGSCH-HHHHHHHHHHHTTCCTTCEEEEEE
T ss_pred EEEechhccCCH-HHHHHHHHHHHHhcCCCCEEEEEe
Confidence 999888775543 135789999999999999999876
No 432
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=97.90 E-value=6.9e-06 Score=84.63 Aligned_cols=131 Identities=11% Similarity=0.197 Sum_probs=87.4
Q ss_pred cceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhh----cc---cchhh-ccccccCCCCCcc---ceeee
Q 006662 477 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GL---IGTYQ-NWCEAMSTYPRTY---DLIHA 545 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl---i~~~~-~~ce~~~~yp~t~---Dl~H~ 545 (636)
..+|||+|||.|.++.+|++.+- .+|+.+|.++..+.++.++ |+ +-+++ ||.+. .+..| |+|-+
T Consensus 124 ~~~vLDlG~GsG~~~~~la~~~~--~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~---~~~~f~~~D~Ivs 198 (284)
T 1nv8_A 124 IKTVADIGTGSGAIGVSVAKFSD--AIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEP---FKEKFASIEMILS 198 (284)
T ss_dssp CCEEEEESCTTSHHHHHHHHHSS--CEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGG---GGGGTTTCCEEEE
T ss_pred CCEEEEEeCchhHHHHHHHHCCC--CEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhh---cccccCCCCEEEE
Confidence 34799999999999999987632 3566777777788887664 44 33333 44443 34689 99988
Q ss_pred cccccc----------CC------CCcCHHHHHHHHh-hcccCCcEEEEEeCHHHHHHHHHHHhcCCCceEEeccCCCCC
Q 006662 546 DSIFSL----------YK------DRCEMEDVLLEMD-RILRPEGSVIIRDDVDILVKIKSITDGMEWEGRIADHENGPR 608 (636)
Q Consensus 546 ~~~fs~----------~~------~~c~~~~~l~e~d-RiLrPgG~~i~~d~~~~~~~~~~~~~~~~W~~~~~~~e~~~~ 608 (636)
+--+.. +. ..++-..++.++- +.|+|||++++.-..+....+.++++.. ....|..
T Consensus 199 nPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~~~q~~~v~~~~~~~---~~~~D~~---- 271 (284)
T 1nv8_A 199 NPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIGEDQVEELKKIVSDT---VFLKDSA---- 271 (284)
T ss_dssp CCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECCTTCHHHHTTTSTTC---EEEECTT----
T ss_pred cCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEECchHHHHHHHHHHhC---CeecccC----
Confidence 622211 11 1122237889999 9999999999976666667777776665 3333333
Q ss_pred CcceEEEEEec
Q 006662 609 QREKILFANKK 619 (636)
Q Consensus 609 ~~~~~l~~~K~ 619 (636)
+.+++++++++
T Consensus 272 g~~R~~~~~~k 282 (284)
T 1nv8_A 272 GKYRFLLLNRR 282 (284)
T ss_dssp SSEEEEEEECC
T ss_pred CCceEEEEEEc
Confidence 56788888765
No 433
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=97.89 E-value=2.4e-05 Score=84.15 Aligned_cols=102 Identities=16% Similarity=0.146 Sum_probs=64.3
Q ss_pred CcEEEEeCCCCcHHHHHHhhc-------C------------C--EEEEcCcCCchHH------HHHHHH-HcC--CCeEE
Q 006662 219 IRTAIDTGCGVASWGAYLMSR-------N------------I--LAVSFAPRDTHEA------QVQFAL-ERG--VPALI 268 (636)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~-------~------------v--~vv~i~p~Dis~a------~l~~A~-erg--~~~~~ 268 (636)
..+|+|+||++|..+..+... . + ...|+...|.+.- ..+... +.+ .+..+
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~~~~f 132 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKIGSCL 132 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCTTSEE
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCCCCceE
Confidence 468999999999888877654 0 1 1123333444322 112121 222 22344
Q ss_pred EEecc---ccCCCCCCCeeEEEecccccccccChH---------------------------------------HHHHHH
Q 006662 269 GVMAS---IRLPYPSRAFDMAHCSRCLIPWGQYDG---------------------------------------LYLIEV 306 (636)
Q Consensus 269 ~~~d~---~~Lpf~~~sFDlV~~s~~L~h~~~d~~---------------------------------------~~L~el 306 (636)
..+.. ....||+++||+|+++.+| ||..+.. .+|+..
T Consensus 133 ~~gvpgSFy~rlfp~~S~d~v~Ss~aL-HWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~R 211 (384)
T 2efj_A 133 IGAMPGSFYSRLFPEESMHFLHSCYCL-HWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRIH 211 (384)
T ss_dssp EEECCSCTTSCCSCTTCEEEEEEESCT-TBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecchhhhhccCCCCceEEEEeccee-eecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 44432 3346899999999999999 8864431 125666
Q ss_pred HhcccCCcEEEEEeC
Q 006662 307 DRVLRPGGYWILSGP 321 (636)
Q Consensus 307 ~RvLKPGG~Liis~p 321 (636)
.+.|+|||.++++..
T Consensus 212 a~eL~pGG~mvl~~~ 226 (384)
T 2efj_A 212 SEELISRGRMLLTFI 226 (384)
T ss_dssp HHHEEEEEEEEEEEE
T ss_pred HHHhccCCeEEEEEe
Confidence 899999999999865
No 434
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=97.88 E-value=2.1e-05 Score=77.91 Aligned_cols=129 Identities=9% Similarity=0.077 Sum_probs=81.6
Q ss_pred cceEeeecccchhhhhhhcCC---CeEEEEecCCCCCccchHHHHhh----ccc----chhh-ccccccCCC-CCcccee
Q 006662 477 YRNLLDMNAYLGGFAAALVDD---PLWVMNTVPVEAKINTLGVIYER----GLI----GTYQ-NWCEAMSTY-PRTYDLI 543 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~~---~v~~mnv~~~~~~~~~l~~~~eR----gli----~~~~-~~ce~~~~y-p~t~Dl~ 543 (636)
..+|||+|||.|.++.+|++. +- .|+.+|.++.++..+.++ |+- -+.+ |..+.+..+ +.+||+|
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~~~~---~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~V 133 (221)
T 3dr5_A 57 STGAIAITPAAGLVGLYILNGLADNT---TLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQLV 133 (221)
T ss_dssp CCEEEEESTTHHHHHHHHHHHSCTTS---EEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEEE
T ss_pred CCCEEEEcCCchHHHHHHHHhCCCCC---EEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCeE
Confidence 448999999999999988762 22 344556666677666543 432 2222 222333445 4899999
Q ss_pred eeccccccCCCCcCHHHHHHHHhhcccCCcEEEEEeC------------HHHHHHHHHHHhcCCCc----eEEeccCCCC
Q 006662 544 HADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDD------------VDILVKIKSITDGMEWE----GRIADHENGP 607 (636)
Q Consensus 544 H~~~~fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~------------~~~~~~~~~~~~~~~W~----~~~~~~e~~~ 607 (636)
-++.. .-....++-++-|+|||||.+++.+- ......++++.+.++++ +.+. |
T Consensus 134 ~~d~~------~~~~~~~l~~~~~~LkpGG~lv~dn~~~~g~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l-----p 202 (221)
T 3dr5_A 134 FGQVS------PMDLKALVDAAWPLLRRGGALVLADALLDGTIADQTRKDRDTQAARDADEYIRSIEGAHVARL-----P 202 (221)
T ss_dssp EECCC------TTTHHHHHHHHHHHEEEEEEEEETTTTGGGTCSCSSCCCHHHHHHHHHHHHHTTCTTEEEEEE-----S
T ss_pred EEcCc------HHHHHHHHHHHHHHcCCCcEEEEeCCCCCCcCCCCCCCChHHHHHHHHHHHHhhCCCeeEEEe-----e
Confidence 87542 23456789999999999999999421 11233455555555554 3332 2
Q ss_pred CCcceEEEEEecC
Q 006662 608 RQREKILFANKKY 620 (636)
Q Consensus 608 ~~~~~~l~~~K~~ 620 (636)
..+.+++++|.+
T Consensus 203 -~gdGl~~~~~~~ 214 (221)
T 3dr5_A 203 -LGAGLTVVTKAL 214 (221)
T ss_dssp -STTCEEEEEECC
T ss_pred -ccchHHHHHHHH
Confidence 357899999976
No 435
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=97.87 E-value=5.3e-06 Score=85.40 Aligned_cols=95 Identities=14% Similarity=0.082 Sum_probs=55.9
Q ss_pred cceEeeecccchhhhhhhcCC-CeEEEEecCCCCCccchHHHHhhcc--------cchhhccccccCCC-CCccceeeec
Q 006662 477 YRNLLDMNAYLGGFAAALVDD-PLWVMNTVPVEAKINTLGVIYERGL--------IGTYQNWCEAMSTY-PRTYDLIHAD 546 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~~-~v~~mnv~~~~~~~~~l~~~~eRgl--------i~~~~~~ce~~~~y-p~t~Dl~H~~ 546 (636)
..+|||+|||.|+|+.+|+++ .|+.+-+.|. +..+.++.+ +-.+.. +..+..+ +.+||+|-|+
T Consensus 83 g~~VLDlGcGtG~~s~~la~~~~V~gVD~s~m------~~~a~~~~~~~~~~~~~v~~~~~-~~D~~~l~~~~fD~Vvsd 155 (276)
T 2wa2_A 83 KGTVVDLGCGRGSWSYYAASQPNVREVKAYTL------GTSGHEKPRLVETFGWNLITFKS-KVDVTKMEPFQADTVLCD 155 (276)
T ss_dssp CEEEEEESCTTCHHHHHHHTSTTEEEEEEECC------CCTTSCCCCCCCCTTGGGEEEEC-SCCGGGCCCCCCSEEEEC
T ss_pred CCEEEEeccCCCHHHHHHHHcCCEEEEECchh------hhhhhhchhhhhhcCCCeEEEec-cCcHhhCCCCCcCEEEEC
Confidence 678999999999999999876 4555555442 111111111 111100 1122224 4899999986
Q ss_pred cccccCCCCcCHH---HHHHHHhhcccCCc--EEEEE
Q 006662 547 SIFSLYKDRCEME---DVLLEMDRILRPEG--SVIIR 578 (636)
Q Consensus 547 ~~fs~~~~~c~~~---~~l~e~dRiLrPgG--~~i~~ 578 (636)
..+......-+.. .+|-++.|+||||| .|++.
T Consensus 156 ~~~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~ 192 (276)
T 2wa2_A 156 IGESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVK 192 (276)
T ss_dssp CCCCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEE
T ss_pred CCcCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEE
Confidence 5532111000001 37888999999999 99985
No 436
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=97.86 E-value=4.4e-07 Score=89.92 Aligned_cols=95 Identities=12% Similarity=0.169 Sum_probs=67.9
Q ss_pred cceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhh----cc---cchhh-ccccccCCCCCccceeeeccc
Q 006662 477 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GL---IGTYQ-NWCEAMSTYPRTYDLIHADSI 548 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl---i~~~~-~~ce~~~~yp~t~Dl~H~~~~ 548 (636)
..+|||+|||.|+++.+|++.+ ..|+.+|.++.++..+.++ |+ +-+++ |+.+ +. -+.+||+|.++..
T Consensus 79 ~~~vLD~gcG~G~~~~~la~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~-~~~~~D~v~~~~~ 153 (241)
T 3gdh_A 79 CDVVVDAFCGVGGNTIQFALTG---MRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLL-LA-SFLKADVVFLSPP 153 (241)
T ss_dssp CSEEEETTCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHH-HG-GGCCCSEEEECCC
T ss_pred CCEEEECccccCHHHHHHHHcC---CEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHH-hc-ccCCCCEEEECCC
Confidence 5689999999999999999886 4677778877788877655 33 22222 2222 11 2379999999888
Q ss_pred cccCCCCcCHHHHHHHHhhcccCCcEEEEEe
Q 006662 549 FSLYKDRCEMEDVLLEMDRILRPEGSVIIRD 579 (636)
Q Consensus 549 fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d 579 (636)
|...... ...+.|+.|+|+|||.+|+..
T Consensus 154 ~~~~~~~---~~~~~~~~~~L~pgG~~i~~~ 181 (241)
T 3gdh_A 154 WGGPDYA---TAETFDIRTMMSPDGFEIFRL 181 (241)
T ss_dssp CSSGGGG---GSSSBCTTTSCSSCHHHHHHH
T ss_pred cCCcchh---hhHHHHHHhhcCCcceeHHHH
Confidence 7753322 236678999999999987764
No 437
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=97.86 E-value=1.4e-05 Score=79.36 Aligned_cols=130 Identities=12% Similarity=0.150 Sum_probs=81.4
Q ss_pred cceEeeecccchhhhhhhcCC-C-eEEEEecCCCCCccchHHHHhh----ccc---chhh-ccccccCC-----------
Q 006662 477 YRNLLDMNAYLGGFAAALVDD-P-LWVMNTVPVEAKINTLGVIYER----GLI---GTYQ-NWCEAMST----------- 535 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~~-~-v~~mnv~~~~~~~~~l~~~~eR----gli---~~~~-~~ce~~~~----------- 535 (636)
..+|||+|||.|.++.+|++. + - -+|+.+|.++..+..+.++ |+- -+.+ |..+....
T Consensus 61 ~~~VLdiG~G~G~~~~~la~~~~~~--~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~ 138 (239)
T 2hnk_A 61 AKRIIEIGTFTGYSSLCFASALPED--GKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSWA 138 (239)
T ss_dssp CSEEEEECCTTCHHHHHHHHHSCTT--CEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGGG
T ss_pred cCEEEEEeCCCCHHHHHHHHhCCCC--CEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhccccccc
Confidence 468999999999999998764 1 1 2445556666677777665 542 2221 22121111
Q ss_pred --C--C-CccceeeeccccccCCCCcCHHHHHHHHhhcccCCcEEEEEeC------------HHHHHHH----HHHHhcC
Q 006662 536 --Y--P-RTYDLIHADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDD------------VDILVKI----KSITDGM 594 (636)
Q Consensus 536 --y--p-~t~Dl~H~~~~fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~------------~~~~~~~----~~~~~~~ 594 (636)
| + .+||+|.++.. .-..+.+|-++-|+|||||.+++.+- ......+ +.+.+.-
T Consensus 139 ~~f~~~~~~fD~I~~~~~------~~~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (239)
T 2hnk_A 139 SDFAFGPSSIDLFFLDAD------KENYPNYYPLILKLLKPGGLLIADNVLWDGSVADLSHQEPSTVGIRKFNELVYNDS 212 (239)
T ss_dssp TTTCCSTTCEEEEEECSC------GGGHHHHHHHHHHHEEEEEEEEEECSSGGGGGGCTTCCCHHHHHHHHHHHHHHHCT
T ss_pred ccccCCCCCcCEEEEeCC------HHHHHHHHHHHHHHcCCCeEEEEEccccCCcccCccccchHHHHHHHHHHHHhhCC
Confidence 2 2 68999987532 22456889999999999999999751 1122223 3344555
Q ss_pred CCceEEeccCCCCCCcceEEEEEecC
Q 006662 595 EWEGRIADHENGPRQREKILFANKKY 620 (636)
Q Consensus 595 ~W~~~~~~~e~~~~~~~~~l~~~K~~ 620 (636)
++.+...-. .+.+.+++|++
T Consensus 213 ~~~~~~~p~------~~g~~~~~~~~ 232 (239)
T 2hnk_A 213 LVDVSLVPI------ADGVSLVRKRL 232 (239)
T ss_dssp TEEEEEECS------TTCEEEEEECC
T ss_pred CeEEEEEEc------CCceEeeeehh
Confidence 666666533 25688888876
No 438
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=97.86 E-value=2.6e-05 Score=87.63 Aligned_cols=115 Identities=12% Similarity=0.087 Sum_probs=79.0
Q ss_pred HHHHHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhc----C----------------CEEEEcCcCCchHHHHHHHHH
Q 006662 202 DAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR----N----------------ILAVSFAPRDTHEAQVQFALE 261 (636)
Q Consensus 202 ~~~id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~----~----------------v~vv~i~p~Dis~a~l~~A~e 261 (636)
...++.+.+++....+ .+|||.+||+|.|+..+++. . ..+.++ |+++.+++.|+.
T Consensus 155 ~~iv~~mv~~l~p~~~--~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~Gi---Eid~~~~~lA~~ 229 (541)
T 2ar0_A 155 RPLIKTIIHLLKPQPR--EVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGL---ELVPGTRRLALM 229 (541)
T ss_dssp HHHHHHHHHHHCCCTT--CCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEE---ESCHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCC--CeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEE---cCCHHHHHHHHH
Confidence 3455666777654444 38999999999998887653 1 133444 778888888764
Q ss_pred c----CCC------eEEEEeccccCC-CCCCCeeEEEeccccccccc------------C-hHHHHHHHHhcccCCcEEE
Q 006662 262 R----GVP------ALIGVMASIRLP-YPSRAFDMAHCSRCLIPWGQ------------Y-DGLYLIEVDRVLRPGGYWI 317 (636)
Q Consensus 262 r----g~~------~~~~~~d~~~Lp-f~~~sFDlV~~s~~L~h~~~------------d-~~~~L~el~RvLKPGG~Li 317 (636)
+ +.. ..+..+|....+ ...+.||+|+++.-+..... + ...++..+.+.|||||+++
T Consensus 230 nl~l~gi~~~~~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a 309 (541)
T 2ar0_A 230 NCLLHDIEGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAA 309 (541)
T ss_dssp HHHTTTCCCBGGGTBSEEESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEE
T ss_pred HHHHhCCCccccccCCeEeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEE
Confidence 3 433 566777765443 34578999999865532211 1 1478999999999999999
Q ss_pred EEeC
Q 006662 318 LSGP 321 (636)
Q Consensus 318 is~p 321 (636)
+..|
T Consensus 310 ~V~p 313 (541)
T 2ar0_A 310 VVVP 313 (541)
T ss_dssp EEEE
T ss_pred EEec
Confidence 9976
No 439
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=97.86 E-value=1.3e-05 Score=79.67 Aligned_cols=130 Identities=15% Similarity=0.147 Sum_probs=80.3
Q ss_pred cceEeeecccchhhhhhhcCC-CeEEEEecCCCCCccchHHHHhh----cc---cchhh-ccccccCCCC-----Cccce
Q 006662 477 YRNLLDMNAYLGGFAAALVDD-PLWVMNTVPVEAKINTLGVIYER----GL---IGTYQ-NWCEAMSTYP-----RTYDL 542 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~~-~v~~mnv~~~~~~~~~l~~~~eR----gl---i~~~~-~~ce~~~~yp-----~t~Dl 542 (636)
.++|||+|||.|.++.+|++. +- .-.|+.+|.++..+.++.++ |+ |-++. |..+.+..+| .+||+
T Consensus 73 ~~~vLdiG~G~G~~~~~la~~~~~-~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD~ 151 (232)
T 3cbg_A 73 AKQVLEIGVFRGYSALAMALQLPP-DGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFDL 151 (232)
T ss_dssp CCEEEEECCTTSHHHHHHHTTSCT-TCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEEE
T ss_pred CCEEEEecCCCCHHHHHHHHhCCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcCE
Confidence 458999999999999998874 10 01345556666677776654 44 22222 2222222232 68999
Q ss_pred eeeccccccCCCCcCHHHHHHHHhhcccCCcEEEEEeC------------HHHHHHHHHH----HhcCCCceEEeccCCC
Q 006662 543 IHADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDD------------VDILVKIKSI----TDGMEWEGRIADHENG 606 (636)
Q Consensus 543 ~H~~~~fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~------------~~~~~~~~~~----~~~~~W~~~~~~~e~~ 606 (636)
|.+++. .-....++-++-|+|||||.+++.+- ......++++ ...-+++..+...
T Consensus 152 V~~d~~------~~~~~~~l~~~~~~LkpgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~--- 222 (232)
T 3cbg_A 152 IFIDAD------KRNYPRYYEIGLNLLRRGGLMVIDNVLWHGKVTEVDPQEAQTQVLQQFNRDLAQDERVRISVIPL--- 222 (232)
T ss_dssp EEECSC------GGGHHHHHHHHHHTEEEEEEEEEECTTGGGGGGCSSCCSHHHHHHHHHHHHHTTCTTEEEEEECS---
T ss_pred EEECCC------HHHHHHHHHHHHHHcCCCeEEEEeCCCcCCccCCcccCChHHHHHHHHHHHHhhCCCeEEEEEEc---
Confidence 987543 23457899999999999999999532 1122334443 3444566655432
Q ss_pred CCCcceEEEEEec
Q 006662 607 PRQREKILFANKK 619 (636)
Q Consensus 607 ~~~~~~~l~~~K~ 619 (636)
.+.+.+++|.
T Consensus 223 ---~dG~~~~~~~ 232 (232)
T 3cbg_A 223 ---GDGMTLALKK 232 (232)
T ss_dssp ---BTCEEEEEEC
T ss_pred ---CCeEEEEEeC
Confidence 3568888874
No 440
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=97.85 E-value=0.00011 Score=76.67 Aligned_cols=108 Identities=11% Similarity=-0.050 Sum_probs=72.3
Q ss_pred HHHhhccCCCCCcEEEEeCCCCcHHHHHHhhc---CCEEEEcCcCCchHHHHHHHHHc----CC-CeEEEEeccccCCCC
Q 006662 208 IGKLINLKDGSIRTAIDTGCGVASWGAYLMSR---NILAVSFAPRDTHEAQVQFALER----GV-PALIGVMASIRLPYP 279 (636)
Q Consensus 208 L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~---~v~vv~i~p~Dis~a~l~~A~er----g~-~~~~~~~d~~~Lpf~ 279 (636)
+..++...++. +|||+|||+|..+..+++. ...++.+ |+++.+++.++++ +. ++.+...|...++..
T Consensus 94 ~~~~l~~~~g~--~VLDlcaG~G~kt~~la~~~~~~g~V~a~---D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~~~~~ 168 (309)
T 2b9e_A 94 PAMLLDPPPGS--HVIDACAAPGNKTSHLAALLKNQGKIFAF---DLDAKRLASMATLLARAGVSCCELAEEDFLAVSPS 168 (309)
T ss_dssp HHHHHCCCTTC--EEEESSCTTCHHHHHHHHHHTTCSEEEEE---ESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSCTT
T ss_pred HHHHhCCCCCC--EEEEeCCChhHHHHHHHHHhCCCCEEEEE---eCCHHHHHHHHHHHHHcCCCeEEEEeCChHhcCcc
Confidence 33445555555 9999999999999999875 2456666 8888888877644 44 578888888776543
Q ss_pred C---CCeeEEEec------ccccc-----c----c-cCh-------HHHHHHHHhcccCCcEEEEEeC
Q 006662 280 S---RAFDMAHCS------RCLIP-----W----G-QYD-------GLYLIEVDRVLRPGGYWILSGP 321 (636)
Q Consensus 280 ~---~sFDlV~~s------~~L~h-----~----~-~d~-------~~~L~el~RvLKPGG~Liis~p 321 (636)
. ++||.|++. ..+.. | . .+. ..+|..+.++|+ ||++++++-
T Consensus 169 ~~~~~~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTC 235 (309)
T 2b9e_A 169 DPRYHEVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTC 235 (309)
T ss_dssp CGGGTTEEEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEES
T ss_pred ccccCCCCEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECC
Confidence 2 579999962 11111 1 1 111 246777888887 999999864
No 441
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=97.85 E-value=3.3e-05 Score=79.10 Aligned_cols=143 Identities=11% Similarity=0.131 Sum_probs=86.2
Q ss_pred CcceEeeecccchhhhhhhcCC-CeEEEEecCCCCCccchHHHHhh------cc----cchhh-ccccccCCCCCcccee
Q 006662 476 RYRNLLDMNAYLGGFAAALVDD-PLWVMNTVPVEAKINTLGVIYER------GL----IGTYQ-NWCEAMSTYPRTYDLI 543 (636)
Q Consensus 476 ~~r~vlD~~~g~ggfaa~l~~~-~v~~mnv~~~~~~~~~l~~~~eR------gl----i~~~~-~~ce~~~~yp~t~Dl~ 543 (636)
..++|||+|||.|+++.+++++ ++ ..|+-+|..+..+.++.+. ++ +.+++ |--+.+...+.+||+|
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~--~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~I 152 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSV--KKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVI 152 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTC--SEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEE
T ss_pred CCCEEEEECCchHHHHHHHHhCCCC--ceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEE
Confidence 3689999999999999999987 55 3444455555677777664 22 11222 1111122235889999
Q ss_pred eeccccccCCC-CcCHHHHHHHHhhcccCCcEEEEEe-----CHHHHHHHHHHHhcCCCceEEeccC--CCCCCcceEEE
Q 006662 544 HADSIFSLYKD-RCEMEDVLLEMDRILRPEGSVIIRD-----DVDILVKIKSITDGMEWEGRIADHE--NGPRQREKILF 615 (636)
Q Consensus 544 H~~~~fs~~~~-~c~~~~~l~e~dRiLrPgG~~i~~d-----~~~~~~~~~~~~~~~~W~~~~~~~e--~~~~~~~~~l~ 615 (636)
-++........ .-....++-++-|+|+|||.+++.. ..+.+..+.+.+++.=-.+...... .-+.+...+++
T Consensus 153 i~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~~~~g~w~~~~ 232 (275)
T 1iy9_A 153 MVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTDNPWFTPELITNVQRDVKEIFPITKLYTANIPTYPSGLWTFTI 232 (275)
T ss_dssp EESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTTCSEEEEEEECCTTSGGGCEEEEE
T ss_pred EECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCccccHHHHHHHHHHHHHhCCCeEEEEEecCcccCcceEEEE
Confidence 98643322111 1112578999999999999999973 2344555555555553344433211 11123467889
Q ss_pred EEecC
Q 006662 616 ANKKY 620 (636)
Q Consensus 616 ~~K~~ 620 (636)
|.|++
T Consensus 233 ask~~ 237 (275)
T 1iy9_A 233 GSKKY 237 (275)
T ss_dssp EESSC
T ss_pred eeCCC
Confidence 99974
No 442
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=97.85 E-value=1.3e-05 Score=83.97 Aligned_cols=107 Identities=11% Similarity=0.072 Sum_probs=64.0
Q ss_pred cceEeeecccchhhhhhhcCC-CeEEEEecCCCCCccchHHHHhhcc-----------------cchhh-ccccccCCCC
Q 006662 477 YRNLLDMNAYLGGFAAALVDD-PLWVMNTVPVEAKINTLGVIYERGL-----------------IGTYQ-NWCEAMSTYP 537 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~~-~v~~mnv~~~~~~~~~l~~~~eRgl-----------------i~~~~-~~ce~~~~yp 537 (636)
..+|||+|||.|.++.+|++. +- .-.|+.+|.++..+..+.++.- +-+++ |..+....++
T Consensus 106 g~~VLDiG~G~G~~~~~la~~~g~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~~~ 184 (336)
T 2b25_A 106 GDTVLEAGSGSGGMSLFLSKAVGS-QGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATEDIK 184 (336)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCT-TCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC----
T ss_pred CCEEEEeCCCcCHHHHHHHHHhCC-CceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHcccccC
Confidence 569999999999999998764 10 0134455666667777766421 22222 3333322455
Q ss_pred -CccceeeeccccccCCCCcCHHHHHHHHhhcccCCcEEEEEeC-HHHHHHHHHHHh
Q 006662 538 -RTYDLIHADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDD-VDILVKIKSITD 592 (636)
Q Consensus 538 -~t~Dl~H~~~~fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~-~~~~~~~~~~~~ 592 (636)
.+||+|.++. .....+|-++.|+|||||.+++... .+.+.++.+.++
T Consensus 185 ~~~fD~V~~~~--------~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~ 233 (336)
T 2b25_A 185 SLTFDAVALDM--------LNPHVTLPVFYPHLKHGGVCAVYVVNITQVIELLDGIR 233 (336)
T ss_dssp ---EEEEEECS--------SSTTTTHHHHGGGEEEEEEEEEEESSHHHHHHHHHHHH
T ss_pred CCCeeEEEECC--------CCHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHH
Confidence 6899998732 2223478999999999999998754 333444334333
No 443
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=97.84 E-value=1.9e-05 Score=81.36 Aligned_cols=73 Identities=15% Similarity=0.191 Sum_probs=57.9
Q ss_pred HHHHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhcCCE----EEEcCcCCchHHHHHHHHHc-CCCeEEEEeccccCC
Q 006662 203 AYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNIL----AVSFAPRDTHEAQVQFALER-GVPALIGVMASIRLP 277 (636)
Q Consensus 203 ~~id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~~v~----vv~i~p~Dis~a~l~~A~er-g~~~~~~~~d~~~Lp 277 (636)
..++.+.+.+...++. +|||||||+|.++..|++++.. ++++ |+++.+++.++++ ..++.+..+|...++
T Consensus 29 ~i~~~iv~~~~~~~~~--~VLEIG~G~G~lt~~La~~~~~~~~~V~av---Did~~~l~~a~~~~~~~v~~i~~D~~~~~ 103 (279)
T 3uzu_A 29 GVIDAIVAAIRPERGE--RMVEIGPGLGALTGPVIARLATPGSPLHAV---ELDRDLIGRLEQRFGELLELHAGDALTFD 103 (279)
T ss_dssp HHHHHHHHHHCCCTTC--EEEEECCTTSTTHHHHHHHHCBTTBCEEEE---ECCHHHHHHHHHHHGGGEEEEESCGGGCC
T ss_pred HHHHHHHHhcCCCCcC--EEEEEccccHHHHHHHHHhCCCcCCeEEEE---ECCHHHHHHHHHhcCCCcEEEECChhcCC
Confidence 4566777777666555 9999999999999999987554 6666 8899999988776 346888999998888
Q ss_pred CCC
Q 006662 278 YPS 280 (636)
Q Consensus 278 f~~ 280 (636)
+++
T Consensus 104 ~~~ 106 (279)
T 3uzu_A 104 FGS 106 (279)
T ss_dssp GGG
T ss_pred hhH
Confidence 653
No 444
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=97.83 E-value=3.8e-06 Score=82.31 Aligned_cols=93 Identities=14% Similarity=0.083 Sum_probs=60.4
Q ss_pred cceEeeecccchhhhhhhcCC-CeEEEEecCCCCCccchHHHHhhc----c-------cchhh-ccccccCCCCCcccee
Q 006662 477 YRNLLDMNAYLGGFAAALVDD-PLWVMNTVPVEAKINTLGVIYERG----L-------IGTYQ-NWCEAMSTYPRTYDLI 543 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~~-~v~~mnv~~~~~~~~~l~~~~eRg----l-------i~~~~-~~ce~~~~yp~t~Dl~ 543 (636)
..+|||+|||.|.++..|++. +- ..+|+.+|.++..+..+.++. + +-+.+ |..+.+ .-+..||+|
T Consensus 78 ~~~vLDiG~G~G~~~~~la~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~i 155 (226)
T 1i1n_A 78 GAKALDVGSGSGILTACFARMVGC-TGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGY-AEEAPYDAI 155 (226)
T ss_dssp TCEEEEETCTTSHHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCC-GGGCCEEEE
T ss_pred CCEEEEEcCCcCHHHHHHHHHhCC-CcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCc-ccCCCcCEE
Confidence 568999999999999988764 10 014555566666777765542 1 22222 222111 113689999
Q ss_pred eeccccccCCCCcCHHHHHHHHhhcccCCcEEEEEeC
Q 006662 544 HADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDD 580 (636)
Q Consensus 544 H~~~~fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~ 580 (636)
+++..+. .++-++-|+|||||.+++...
T Consensus 156 ~~~~~~~---------~~~~~~~~~LkpgG~lv~~~~ 183 (226)
T 1i1n_A 156 HVGAAAP---------VVPQALIDQLKPGGRLILPVG 183 (226)
T ss_dssp EECSBBS---------SCCHHHHHTEEEEEEEEEEES
T ss_pred EECCchH---------HHHHHHHHhcCCCcEEEEEEe
Confidence 9866552 345688999999999999753
No 445
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=97.82 E-value=2.5e-05 Score=81.16 Aligned_cols=142 Identities=15% Similarity=0.124 Sum_probs=84.3
Q ss_pred CcceEeeecccchhhhhhhcCC-CeEEEEecCCCCCccchHHHHhhc------c----cchhh-ccccccCC-CCCccce
Q 006662 476 RYRNLLDMNAYLGGFAAALVDD-PLWVMNTVPVEAKINTLGVIYERG------L----IGTYQ-NWCEAMST-YPRTYDL 542 (636)
Q Consensus 476 ~~r~vlD~~~g~ggfaa~l~~~-~v~~mnv~~~~~~~~~l~~~~eRg------l----i~~~~-~~ce~~~~-yp~t~Dl 542 (636)
...+|||+|||.|+++..|++. ++ ..|+.+|.++..+.++.++- + +-++. |..+-... -+.+||+
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~~--~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDv 172 (304)
T 3bwc_A 95 KPERVLIIGGGDGGVLREVLRHGTV--EHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDV 172 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHHTCTTC--CEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEE
T ss_pred CCCeEEEEcCCCCHHHHHHHhCCCC--CEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeE
Confidence 3579999999999999999876 34 35555666666777776642 1 11221 22221112 2578999
Q ss_pred eeeccccccCCCCcC-HHHHHHHHhhcccCCcEEEEEeC-----HHHHHHHHHHHhcCCCce-EEecc--CCCCCCcceE
Q 006662 543 IHADSIFSLYKDRCE-MEDVLLEMDRILRPEGSVIIRDD-----VDILVKIKSITDGMEWEG-RIADH--ENGPRQREKI 613 (636)
Q Consensus 543 ~H~~~~fs~~~~~c~-~~~~l~e~dRiLrPgG~~i~~d~-----~~~~~~~~~~~~~~~W~~-~~~~~--e~~~~~~~~~ 613 (636)
|-++.........-. -..++-++-|+|||||.+++... ......+.+.++...+.. ..... ..-+.+.-..
T Consensus 173 Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~GF~~v~~~~~~vP~yp~g~w~f 252 (304)
T 3bwc_A 173 VIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGESIWLDLELIEKMSRFIRETGFASVQYALMHVPTYPCGSIGT 252 (304)
T ss_dssp EEEECC---------CCHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHHHTCSEEEEEECCCTTSTTSCCEE
T ss_pred EEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHHhCCCCcEEEEEeecccccCcceEE
Confidence 998644322111111 15789999999999999999632 234556666666554543 33221 1112244568
Q ss_pred EEEEec
Q 006662 614 LFANKK 619 (636)
Q Consensus 614 l~~~K~ 619 (636)
++|.|.
T Consensus 253 ~~as~~ 258 (304)
T 3bwc_A 253 LVCSKK 258 (304)
T ss_dssp EEEESS
T ss_pred EEEeCC
Confidence 889886
No 446
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=97.81 E-value=2.5e-05 Score=80.84 Aligned_cols=142 Identities=14% Similarity=0.078 Sum_probs=82.5
Q ss_pred cceEeeecccchhhhhhhcCC-CeEEEEecCCCCCccchHHHHhh------cc----cchhh-ccccccCCCCCccceee
Q 006662 477 YRNLLDMNAYLGGFAAALVDD-PLWVMNTVPVEAKINTLGVIYER------GL----IGTYQ-NWCEAMSTYPRTYDLIH 544 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~~-~v~~mnv~~~~~~~~~l~~~~eR------gl----i~~~~-~~ce~~~~yp~t~Dl~H 544 (636)
..+|||+|||.|+++.++++. ++ .+|+.+|.++..+.++.++ ++ +.+++ |..+.....+.+||+|-
T Consensus 91 ~~~VLdiG~G~G~~~~~l~~~~~~--~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 168 (296)
T 1inl_A 91 PKKVLIIGGGDGGTLREVLKHDSV--EKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVII 168 (296)
T ss_dssp CCEEEEEECTTCHHHHHHTTSTTC--SEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEE
T ss_pred CCEEEEEcCCcCHHHHHHHhcCCC--CEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEE
Confidence 479999999999999999987 44 3555666666777777664 22 11121 21111223358899998
Q ss_pred eccccc-cCC-CCcCHHHHHHHHhhcccCCcEEEEEe-----CHHHHHHHHHHHhcCCCceEEecc--CCCCCCcceEEE
Q 006662 545 ADSIFS-LYK-DRCEMEDVLLEMDRILRPEGSVIIRD-----DVDILVKIKSITDGMEWEGRIADH--ENGPRQREKILF 615 (636)
Q Consensus 545 ~~~~fs-~~~-~~c~~~~~l~e~dRiLrPgG~~i~~d-----~~~~~~~~~~~~~~~~W~~~~~~~--e~~~~~~~~~l~ 615 (636)
++.... ... ..-....++-++-|+|+|||.+++.- ..+.+..+.+.+++.--.+..... ..-|.+...+++
T Consensus 169 ~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~~p~g~~~f~~ 248 (296)
T 1inl_A 169 IDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETEDPFYDIGWFKLAYRRISKVFPITRVYLGFMTTYPSGMWSYTF 248 (296)
T ss_dssp EEC----------CCSHHHHHHHHHHEEEEEEEEEECCCTTTTHHHHHHHHHHHHHHCSEEEEEEEECTTSTTSEEEEEE
T ss_pred EcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEccCcccCHHHHHHHHHHHHHHCCceEEEEeecCccCCCceEEEE
Confidence 753211 110 00012688999999999999999962 233334443333333233333221 111224567899
Q ss_pred EEecC
Q 006662 616 ANKKY 620 (636)
Q Consensus 616 ~~K~~ 620 (636)
|.|++
T Consensus 249 as~~~ 253 (296)
T 1inl_A 249 ASKGI 253 (296)
T ss_dssp EESSC
T ss_pred ecCCC
Confidence 99974
No 447
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=97.81 E-value=1.1e-05 Score=85.21 Aligned_cols=120 Identities=18% Similarity=0.116 Sum_probs=77.1
Q ss_pred cceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhh----cc----cchhhccccccCCC----CCccceee
Q 006662 477 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GL----IGTYQNWCEAMSTY----PRTYDLIH 544 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl----i~~~~~~ce~~~~y----p~t~Dl~H 544 (636)
..+|||+|||+|+|+.++++.+. .|+.+|.++.++..+.+. |+ +-+++.=+..+... ..+||+|-
T Consensus 154 ~~~VLDlgcGtG~~sl~la~~ga---~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii 230 (332)
T 2igt_A 154 PLKVLNLFGYTGVASLVAAAAGA---EVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDIIL 230 (332)
T ss_dssp CCEEEEETCTTCHHHHHHHHTTC---EEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEEE
T ss_pred CCcEEEcccccCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEEE
Confidence 56899999999999999988765 677788887888877664 33 22222111111111 35899987
Q ss_pred eccc-cccCC------CCcCHHHHHHHHhhcccCCcEEEEEe------C-HHHHHHHHHHHhcCCCceE
Q 006662 545 ADSI-FSLYK------DRCEMEDVLLEMDRILRPEGSVIIRD------D-VDILVKIKSITDGMEWEGR 599 (636)
Q Consensus 545 ~~~~-fs~~~------~~c~~~~~l~e~dRiLrPgG~~i~~d------~-~~~~~~~~~~~~~~~W~~~ 599 (636)
++-- |.... ..-+...++.++-|+|+|||++++.. . ......+++.++....++.
T Consensus 231 ~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~~~~~~~~~~~~~l~~a~~~~g~~v~ 299 (332)
T 2igt_A 231 TDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAYSIRASFYSMHELMRETMRGAGGVVA 299 (332)
T ss_dssp ECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEECCTTSCHHHHHHHHHHHTTTSCSEEE
T ss_pred ECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECCCCCCCHHHHHHHHHHHHHHcCCeEE
Confidence 7433 22111 11135688999999999999988753 1 2244455556666666654
No 448
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=97.80 E-value=7.8e-05 Score=75.42 Aligned_cols=83 Identities=12% Similarity=0.169 Sum_probs=63.7
Q ss_pred HHHHHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhcC-CEEEEcCcCCchHHHHHHHHHc-CCCeEEEEeccccCCCC
Q 006662 202 DAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRN-ILAVSFAPRDTHEAQVQFALER-GVPALIGVMASIRLPYP 279 (636)
Q Consensus 202 ~~~id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~~-v~vv~i~p~Dis~a~l~~A~er-g~~~~~~~~d~~~Lpf~ 279 (636)
...++.+.+.+...++. +|||||||+|.++..|++++ ..++++ |+++.+++.++++ ..++.+..+|...++++
T Consensus 17 ~~i~~~iv~~~~~~~~~--~VLDiG~G~G~lt~~L~~~~~~~v~av---Eid~~~~~~~~~~~~~~v~~i~~D~~~~~~~ 91 (249)
T 3ftd_A 17 EGVLKKIAEELNIEEGN--TVVEVGGGTGNLTKVLLQHPLKKLYVI---ELDREMVENLKSIGDERLEVINEDASKFPFC 91 (249)
T ss_dssp HHHHHHHHHHTTCCTTC--EEEEEESCHHHHHHHHTTSCCSEEEEE---CCCHHHHHHHTTSCCTTEEEECSCTTTCCGG
T ss_pred HHHHHHHHHhcCCCCcC--EEEEEcCchHHHHHHHHHcCCCeEEEE---ECCHHHHHHHHhccCCCeEEEEcchhhCChh
Confidence 44667777777665555 89999999999999999995 677777 9999999999876 23578888999888876
Q ss_pred CC--CeeEEEecc
Q 006662 280 SR--AFDMAHCSR 290 (636)
Q Consensus 280 ~~--sFDlV~~s~ 290 (636)
+. .| .|+++.
T Consensus 92 ~~~~~~-~vv~Nl 103 (249)
T 3ftd_A 92 SLGKEL-KVVGNL 103 (249)
T ss_dssp GSCSSE-EEEEEC
T ss_pred HccCCc-EEEEEC
Confidence 42 33 555554
No 449
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=97.79 E-value=3.2e-05 Score=81.15 Aligned_cols=142 Identities=17% Similarity=0.160 Sum_probs=86.2
Q ss_pred cceEeeecccchhhhhhhcCC-CeEEEEecCCCCCccchHHHHhh------cc----cchhh-ccccccCCCCCccceee
Q 006662 477 YRNLLDMNAYLGGFAAALVDD-PLWVMNTVPVEAKINTLGVIYER------GL----IGTYQ-NWCEAMSTYPRTYDLIH 544 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~~-~v~~mnv~~~~~~~~~l~~~~eR------gl----i~~~~-~~ce~~~~yp~t~Dl~H 544 (636)
..+|||+|||.|+++.++++. +. .+|+.+|.++..+.++.++ |+ +-+++ |..+.....+.+||+|-
T Consensus 117 ~~~VLdiG~G~G~~~~~l~~~~~~--~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi 194 (321)
T 2pt6_A 117 PKNVLVVGGGDGGIIRELCKYKSV--ENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 194 (321)
T ss_dssp CCEEEEEECTTCHHHHHHTTCTTC--CEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCEEEEEcCCccHHHHHHHHcCCC--CEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEE
Confidence 478999999999999999987 44 4556667666788887764 12 11121 22222222357899998
Q ss_pred eccccccCCCCcCH--HHHHHHHhhcccCCcEEEEEe-----CHHHHHHHHHHHhcCCCceEEeccC--CCCCCcceEEE
Q 006662 545 ADSIFSLYKDRCEM--EDVLLEMDRILRPEGSVIIRD-----DVDILVKIKSITDGMEWEGRIADHE--NGPRQREKILF 615 (636)
Q Consensus 545 ~~~~fs~~~~~c~~--~~~l~e~dRiLrPgG~~i~~d-----~~~~~~~~~~~~~~~~W~~~~~~~e--~~~~~~~~~l~ 615 (636)
++.. ......-.+ ..++-++-|+|+|||.+++.. ..+.+..+.+.++..--.+...... ..+.+.-.+++
T Consensus 195 ~d~~-~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~~~~g~w~f~~ 273 (321)
T 2pt6_A 195 VDSS-DPIGPAETLFNQNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYAKKLFKKVEYANISIPTYPCGCIGILC 273 (321)
T ss_dssp EECC-CSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHTTCSEEEEEEEECTTSGGGEEEEEE
T ss_pred ECCc-CCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHHCCCeEEEEEEeccccCceEEEEE
Confidence 8642 211111111 688999999999999999953 2344555555555554444433211 11112345788
Q ss_pred EEecCC
Q 006662 616 ANKKYW 621 (636)
Q Consensus 616 ~~K~~w 621 (636)
|.|.+.
T Consensus 274 as~~~~ 279 (321)
T 2pt6_A 274 CSKTDT 279 (321)
T ss_dssp EESSTT
T ss_pred eeCCCC
Confidence 998753
No 450
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=97.79 E-value=3.5e-05 Score=78.27 Aligned_cols=109 Identities=11% Similarity=0.077 Sum_probs=76.0
Q ss_pred cceEeeecccchhhhhhhcCC--CeEEEEecCCCCCccchHHHHhh----cc---cchhh-ccccccCCCC-Cccceeee
Q 006662 477 YRNLLDMNAYLGGFAAALVDD--PLWVMNTVPVEAKINTLGVIYER----GL---IGTYQ-NWCEAMSTYP-RTYDLIHA 545 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~~--~v~~mnv~~~~~~~~~l~~~~eR----gl---i~~~~-~~ce~~~~yp-~t~Dl~H~ 545 (636)
..+|||+|||.|.++.+|++. +- .+|+.+|.++..+..+.++ |+ +-.++ |..+. +| ..||+|-+
T Consensus 113 ~~~VLDiG~G~G~~~~~la~~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~~~~D~V~~ 187 (277)
T 1o54_A 113 GDRIIDTGVGSGAMCAVLARAVGSS--GKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEG---FDEKDVDALFL 187 (277)
T ss_dssp TCEEEEECCTTSHHHHHHHHHTTTT--CEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC---CSCCSEEEEEE
T ss_pred CCEEEEECCcCCHHHHHHHHHhCCC--cEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc---ccCCccCEEEE
Confidence 568999999999999988765 11 2556667766788887766 44 22222 33332 55 68999877
Q ss_pred ccccccCCCCcCHHHHHHHHhhcccCCcEEEEEeC-HHHHHHHHHHHhcCCCce
Q 006662 546 DSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDD-VDILVKIKSITDGMEWEG 598 (636)
Q Consensus 546 ~~~fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~-~~~~~~~~~~~~~~~W~~ 598 (636)
+ --+...+|-++-|+|+|||.+++.+. .+.+.++.+.++...|..
T Consensus 188 ~--------~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~l~~~gf~~ 233 (277)
T 1o54_A 188 D--------VPDPWNYIDKCWEALKGGGRFATVCPTTNQVQETLKKLQELPFIR 233 (277)
T ss_dssp C--------CSCGGGTHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHSSEEE
T ss_pred C--------CcCHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCce
Confidence 2 22345789999999999999999876 446666766666666653
No 451
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=97.78 E-value=2.3e-05 Score=78.90 Aligned_cols=95 Identities=13% Similarity=0.152 Sum_probs=63.6
Q ss_pred cceEeeecccchhhhhhhcCC-C-eEEEEecCCCCCccchHHHHhh----cc---cchhh-ccccccCCC------CCcc
Q 006662 477 YRNLLDMNAYLGGFAAALVDD-P-LWVMNTVPVEAKINTLGVIYER----GL---IGTYQ-NWCEAMSTY------PRTY 540 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~~-~-v~~mnv~~~~~~~~~l~~~~eR----gl---i~~~~-~~ce~~~~y------p~t~ 540 (636)
.++|||+|||.|.++..|++. + - -.|+.+|.++.++.++.++ |+ |-+.+ |..+....+ +.+|
T Consensus 80 ~~~VLeiG~G~G~~~~~la~~~~~~--~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~f 157 (247)
T 1sui_A 80 AKNTMEIGVYTGYSLLATALAIPED--GKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSY 157 (247)
T ss_dssp CCEEEEECCGGGHHHHHHHHHSCTT--CEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCB
T ss_pred cCEEEEeCCCcCHHHHHHHHhCCCC--CEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCCE
Confidence 468999999999999888753 1 1 2445556665677776553 55 22222 222222222 4789
Q ss_pred ceeeeccccccCCCCcCHHHHHHHHhhcccCCcEEEEEe
Q 006662 541 DLIHADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRD 579 (636)
Q Consensus 541 Dl~H~~~~fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d 579 (636)
|+|-+++- .-....++-++-|+|||||.+++.+
T Consensus 158 D~V~~d~~------~~~~~~~l~~~~~~LkpGG~lv~d~ 190 (247)
T 1sui_A 158 DFIFVDAD------KDNYLNYHKRLIDLVKVGGVIGYDN 190 (247)
T ss_dssp SEEEECSC------STTHHHHHHHHHHHBCTTCCEEEEC
T ss_pred EEEEEcCc------hHHHHHHHHHHHHhCCCCeEEEEec
Confidence 99987542 2346789999999999999999863
No 452
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=97.78 E-value=2.7e-05 Score=78.27 Aligned_cols=94 Identities=15% Similarity=0.077 Sum_probs=61.3
Q ss_pred CCcceEeeecccchhhhhhhcCC----C-eEEEEecCCCCCccchHHHH----hhcccc-hhhccccccCCC---CCccc
Q 006662 475 GRYRNLLDMNAYLGGFAAALVDD----P-LWVMNTVPVEAKINTLGVIY----ERGLIG-TYQNWCEAMSTY---PRTYD 541 (636)
Q Consensus 475 ~~~r~vlD~~~g~ggfaa~l~~~----~-v~~mnv~~~~~~~~~l~~~~----eRgli~-~~~~~ce~~~~y---p~t~D 541 (636)
....+|||+|||.|.|..+|++. + |+...+ ++.++..+. +++.+- +..|-+. ...| +.++|
T Consensus 76 kpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~-----s~~~~~~l~~~a~~~~ni~~V~~d~~~-p~~~~~~~~~vD 149 (233)
T 4df3_A 76 KEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEF-----APRVMRDLLTVVRDRRNIFPILGDARF-PEKYRHLVEGVD 149 (233)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEEC-----CHHHHHHHHHHSTTCTTEEEEESCTTC-GGGGTTTCCCEE
T ss_pred CCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeC-----CHHHHHHHHHhhHhhcCeeEEEEeccC-ccccccccceEE
Confidence 45789999999999999999863 2 555444 445665554 344333 3223332 2223 27788
Q ss_pred eeeeccccccCCCCcCHHHHHHHHhhcccCCcEEEEEe
Q 006662 542 LIHADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRD 579 (636)
Q Consensus 542 l~H~~~~fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d 579 (636)
+|.++ +. ..-+.+.+|.|+.|+|||||.++|.+
T Consensus 150 vVf~d--~~---~~~~~~~~l~~~~r~LKpGG~lvI~i 182 (233)
T 4df3_A 150 GLYAD--VA---QPEQAAIVVRNARFFLRDGGYMLMAI 182 (233)
T ss_dssp EEEEC--CC---CTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEe--cc---CChhHHHHHHHHHHhccCCCEEEEEE
Confidence 87653 11 12245678999999999999999973
No 453
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=97.77 E-value=2.4e-05 Score=82.71 Aligned_cols=101 Identities=16% Similarity=0.160 Sum_probs=67.9
Q ss_pred CcceEeeecccchhhhhhhcCC-CeEEEEecCCCCCccchHHHHhh------cc----cchhh-ccccccCCCC-Cccce
Q 006662 476 RYRNLLDMNAYLGGFAAALVDD-PLWVMNTVPVEAKINTLGVIYER------GL----IGTYQ-NWCEAMSTYP-RTYDL 542 (636)
Q Consensus 476 ~~r~vlD~~~g~ggfaa~l~~~-~v~~mnv~~~~~~~~~l~~~~eR------gl----i~~~~-~~ce~~~~yp-~t~Dl 542 (636)
..++|||+|||.|+++..|++. ++ .+|+.+|.++.++.++.++ |+ +-+++ |+.+.+..++ .+||+
T Consensus 120 ~~~~VLdIG~G~G~~a~~la~~~~~--~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDl 197 (334)
T 1xj5_A 120 NPKKVLVIGGGDGGVLREVARHASI--EQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDA 197 (334)
T ss_dssp CCCEEEEETCSSSHHHHHHTTCTTC--CEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEE
T ss_pred CCCEEEEECCCccHHHHHHHHcCCC--CEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccE
Confidence 3589999999999999999987 34 3556667766788887664 33 22222 3333223344 78999
Q ss_pred eeeccccccCCCCcC-HHHHHHHHhhcccCCcEEEEE
Q 006662 543 IHADSIFSLYKDRCE-MEDVLLEMDRILRPEGSVIIR 578 (636)
Q Consensus 543 ~H~~~~fs~~~~~c~-~~~~l~e~dRiLrPgG~~i~~ 578 (636)
|-++..-......-. ...++-++-|+|+|||.+++.
T Consensus 198 Ii~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 234 (334)
T 1xj5_A 198 VIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQ 234 (334)
T ss_dssp EEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEE
T ss_pred EEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 998543111111111 368999999999999999996
No 454
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=97.76 E-value=1.3e-05 Score=77.92 Aligned_cols=99 Identities=13% Similarity=0.125 Sum_probs=68.3
Q ss_pred cceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhh----cc--cchhh-ccccccCCCCCccceeeecccc
Q 006662 477 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GL--IGTYQ-NWCEAMSTYPRTYDLIHADSIF 549 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl--i~~~~-~~ce~~~~yp~t~Dl~H~~~~f 549 (636)
..+|||+|||+|.++.+++.++. -.|+.+|.++.++..+.++ |+ +-+++ |..+.....+.+||+|-++..|
T Consensus 55 ~~~vLDlgcG~G~~~~~l~~~~~--~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~~~fD~V~~~~p~ 132 (202)
T 2fpo_A 55 DAQCLDCFAGSGALGLEALSRYA--AGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFVDPPF 132 (202)
T ss_dssp TCEEEETTCTTCHHHHHHHHTTC--SEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSSCCCCEEEEEECCSS
T ss_pred CCeEEEeCCCcCHHHHHHHhcCC--CEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhhcCCCCCEEEECCCC
Confidence 35899999999999998766653 2677788887888887654 33 23333 3222222234789999887665
Q ss_pred ccCCCCcCHHHHHHHHh--hcccCCcEEEEEeCH
Q 006662 550 SLYKDRCEMEDVLLEMD--RILRPEGSVIIRDDV 581 (636)
Q Consensus 550 s~~~~~c~~~~~l~e~d--RiLrPgG~~i~~d~~ 581 (636)
. .-..+.++-++. |+|+|||.+++....
T Consensus 133 ~----~~~~~~~l~~l~~~~~L~pgG~l~i~~~~ 162 (202)
T 2fpo_A 133 R----RGLLEETINLLEDNGWLADEALIYVESEV 162 (202)
T ss_dssp S----TTTHHHHHHHHHHTTCEEEEEEEEEEEEG
T ss_pred C----CCcHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 4 134567777775 479999999998654
No 455
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=97.76 E-value=2e-05 Score=82.36 Aligned_cols=120 Identities=16% Similarity=0.093 Sum_probs=73.1
Q ss_pred CcceEeeecccchhhhhhhcCC--CeEEEEecCCCCCccchHHHHhh----cc--cchhhccccccCCCCCccceeeecc
Q 006662 476 RYRNLLDMNAYLGGFAAALVDD--PLWVMNTVPVEAKINTLGVIYER----GL--IGTYQNWCEAMSTYPRTYDLIHADS 547 (636)
Q Consensus 476 ~~r~vlD~~~g~ggfaa~l~~~--~v~~mnv~~~~~~~~~l~~~~eR----gl--i~~~~~~ce~~~~yp~t~Dl~H~~~ 547 (636)
...+|||+|||.|+++.+|++. +- -.|+.+|.++.++..+.++ |+ +-+++.=.+.+..++..||+|-++-
T Consensus 118 ~g~~VLDlg~G~G~~t~~la~~~~~~--~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~~~~~fD~Il~d~ 195 (315)
T 1ixk_A 118 PGEIVADMAAAPGGKTSYLAQLMRND--GVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGELNVEFDKILLDA 195 (315)
T ss_dssp TTCEEEECCSSCSHHHHHHHHHTTTC--SEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGGGCCCEEEEEEEC
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhCCC--CEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhcccccccCCEEEEeC
Confidence 3568999999999999998753 11 1355667776777777665 55 2222211122333457899999854
Q ss_pred ccccCC---CCc---------C-------HHHHHHHHhhcccCCcEEEEEe----CHHHHHHHHHHHhcCCCc
Q 006662 548 IFSLYK---DRC---------E-------MEDVLLEMDRILRPEGSVIIRD----DVDILVKIKSITDGMEWE 597 (636)
Q Consensus 548 ~fs~~~---~~c---------~-------~~~~l~e~dRiLrPgG~~i~~d----~~~~~~~~~~~~~~~~W~ 597 (636)
-.|... ..- + ...+|-++-|+|||||.++++. ..+.-..|+.+++...++
T Consensus 196 Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~~~Ene~~v~~~l~~~~~~ 268 (315)
T 1ixk_A 196 PCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLEPEENEFVIQWALDNFDVE 268 (315)
T ss_dssp CTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCCGGGTHHHHHHHHHHSSEE
T ss_pred CCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCChHHhHHHHHHHHhcCCCE
Confidence 433111 000 0 1478999999999999999952 122233455555555443
No 456
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=97.75 E-value=1.2e-05 Score=77.84 Aligned_cols=95 Identities=15% Similarity=0.029 Sum_probs=63.1
Q ss_pred CcceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhh----cc--cchhhccccccCCCC--Cccceeeecc
Q 006662 476 RYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GL--IGTYQNWCEAMSTYP--RTYDLIHADS 547 (636)
Q Consensus 476 ~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl--i~~~~~~ce~~~~yp--~t~Dl~H~~~ 547 (636)
...+|||+|||.|.++..|++..----+|+.+|.++.++..+.++ |+ +-..+ ......+| ..||+|.+++
T Consensus 77 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~--~d~~~~~~~~~~fD~v~~~~ 154 (215)
T 2yxe_A 77 PGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIV--GDGTLGYEPLAPYDRIYTTA 154 (215)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEE--SCGGGCCGGGCCEEEEEESS
T ss_pred CCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEE--CCcccCCCCCCCeeEEEECC
Confidence 356999999999999999876420001445556666788777765 33 22221 11223343 6899999977
Q ss_pred ccccCCCCcCHHHHHHHHhhcccCCcEEEEEeCH
Q 006662 548 IFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDDV 581 (636)
Q Consensus 548 ~fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~~ 581 (636)
++.... -++-|+|||||.+++....
T Consensus 155 ~~~~~~---------~~~~~~L~pgG~lv~~~~~ 179 (215)
T 2yxe_A 155 AGPKIP---------EPLIRQLKDGGKLLMPVGR 179 (215)
T ss_dssp BBSSCC---------HHHHHTEEEEEEEEEEESS
T ss_pred chHHHH---------HHHHHHcCCCcEEEEEECC
Confidence 765332 3889999999999998544
No 457
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=97.75 E-value=3.4e-05 Score=80.80 Aligned_cols=140 Identities=11% Similarity=0.115 Sum_probs=78.4
Q ss_pred cceEeeecccchhhhhhhcCC-CeEEEEecCCCCCccchHHHHhh------cc----cchhh-ccccccCCCCCccceee
Q 006662 477 YRNLLDMNAYLGGFAAALVDD-PLWVMNTVPVEAKINTLGVIYER------GL----IGTYQ-NWCEAMSTYPRTYDLIH 544 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~~-~v~~mnv~~~~~~~~~l~~~~eR------gl----i~~~~-~~ce~~~~yp~t~Dl~H 544 (636)
.++|||+|||.|+++..|++. ++ ..|+-+|..+..+.++.++ |+ +-+++ |..+.+..-+.+||+|-
T Consensus 109 ~~~VLdIG~G~G~~~~~l~~~~~~--~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 186 (314)
T 2b2c_A 109 PKRVLIIGGGDGGILREVLKHESV--EKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVII 186 (314)
T ss_dssp CCEEEEESCTTSHHHHHHTTCTTC--CEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEE
T ss_pred CCEEEEEcCCcCHHHHHHHHcCCC--CEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEE
Confidence 579999999999999999887 34 3555566666788887765 32 11111 22111122357899998
Q ss_pred eccccccCCCCcCH-HHHHHHHhhcccCCcEEEEEe-----CHHHHHHHHHHHhcCCCceEEeccCCCCC---CcceEEE
Q 006662 545 ADSIFSLYKDRCEM-EDVLLEMDRILRPEGSVIIRD-----DVDILVKIKSITDGMEWEGRIADHENGPR---QREKILF 615 (636)
Q Consensus 545 ~~~~fs~~~~~c~~-~~~l~e~dRiLrPgG~~i~~d-----~~~~~~~~~~~~~~~~W~~~~~~~e~~~~---~~~~~l~ 615 (636)
++.........-.. ..++-++-|+|||||.+++.. ..+....+.+.++.+--.+..... .-|. +.-.+++
T Consensus 187 ~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~vF~~v~~~~~-~iP~~~~g~~g~~~ 265 (314)
T 2b2c_A 187 TDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQGESVWLHLPLIAHLVAFNRKIFPAVTYAQS-IVSTYPSGSMGYLI 265 (314)
T ss_dssp ECCC-------------HHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHHHCSEEEEEEE-ECTTSGGGEEEEEE
T ss_pred EcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEECCCcccCHHHHHHHHHHHHHHCCcceEEEE-EecCcCCCceEEEE
Confidence 85422111111112 678999999999999999963 223344444444433223332211 1111 1225888
Q ss_pred EEec
Q 006662 616 ANKK 619 (636)
Q Consensus 616 ~~K~ 619 (636)
|.|.
T Consensus 266 ask~ 269 (314)
T 2b2c_A 266 CAKN 269 (314)
T ss_dssp EESS
T ss_pred EeCC
Confidence 8886
No 458
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=97.75 E-value=5.5e-05 Score=71.91 Aligned_cols=137 Identities=18% Similarity=0.124 Sum_probs=66.2
Q ss_pred cceEeeecccchhhhhhhcCC-CeE-------EEEecCCCCCccchHHHHhhcccchh--hccccc------cCCCC-Cc
Q 006662 477 YRNLLDMNAYLGGFAAALVDD-PLW-------VMNTVPVEAKINTLGVIYERGLIGTY--QNWCEA------MSTYP-RT 539 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~~-~v~-------~mnv~~~~~~~~~l~~~~eRgli~~~--~~~ce~------~~~yp-~t 539 (636)
..+|||+|||.|.++.+|++. +-- ...|+.+|.++.. . .+ ++ -.+ .|..+. ...++ .+
T Consensus 23 ~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-~--~~-~~-~~~~~~d~~~~~~~~~~~~~~~~~~ 97 (196)
T 2nyu_A 23 GLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-P--LE-GA-TFLCPADVTDPRTSQRILEVLPGRR 97 (196)
T ss_dssp TCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-C--CT-TC-EEECSCCTTSHHHHHHHHHHSGGGC
T ss_pred CCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc-c--CC-CC-eEEEeccCCCHHHHHHHHHhcCCCC
Confidence 578999999999999998764 200 0123333333111 0 00 11 111 111110 01134 68
Q ss_pred cceeeeccccccCCCC--------cCHHHHHHHHhhcccCCcEEEEEeCH-HHHHHHHHHHhcCCCceEEec-cCCCCCC
Q 006662 540 YDLIHADSIFSLYKDR--------CEMEDVLLEMDRILRPEGSVIIRDDV-DILVKIKSITDGMEWEGRIAD-HENGPRQ 609 (636)
Q Consensus 540 ~Dl~H~~~~fs~~~~~--------c~~~~~l~e~dRiLrPgG~~i~~d~~-~~~~~~~~~~~~~~W~~~~~~-~e~~~~~ 609 (636)
||+|-+++.+....+. .....+|-++-|+|||||.+++.+-. +....+.+.++..--++.... ....+..
T Consensus 98 fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~~~f~~v~~~~~~~~~~~~ 177 (196)
T 2nyu_A 98 ADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAGSQSRRLQRRLTEEFQNVRIIKPEASRKES 177 (196)
T ss_dssp EEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCSGGGHHHHHHHHHHEEEEEEECCC------
T ss_pred CcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCccHHHHHHHHHHHhcceEEECCcccCccC
Confidence 9999987654321111 11147899999999999999998421 122333333333211222221 1112224
Q ss_pred cceEEEEEe
Q 006662 610 REKILFANK 618 (636)
Q Consensus 610 ~~~~l~~~K 618 (636)
.|..+++..
T Consensus 178 ~e~~~v~~g 186 (196)
T 2nyu_A 178 SEVYFLATQ 186 (196)
T ss_dssp --EEEEEEE
T ss_pred ceEEEEeee
Confidence 577777764
No 459
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=97.74 E-value=7e-05 Score=77.63 Aligned_cols=143 Identities=9% Similarity=0.025 Sum_probs=80.1
Q ss_pred CcceEeeecccchhhhhhhcCC-CeEEEEecCCCCCccchHHHHhhc-------c----cchhh-ccccccCCCCCccce
Q 006662 476 RYRNLLDMNAYLGGFAAALVDD-PLWVMNTVPVEAKINTLGVIYERG-------L----IGTYQ-NWCEAMSTYPRTYDL 542 (636)
Q Consensus 476 ~~r~vlD~~~g~ggfaa~l~~~-~v~~mnv~~~~~~~~~l~~~~eRg-------l----i~~~~-~~ce~~~~yp~t~Dl 542 (636)
..++|||+|||.|+.+..|++. ++ -.|+-+|..+..+.++.++= + +.++. |.-+.....+.+||+
T Consensus 83 ~~~~VLdiG~G~G~~~~~l~~~~~~--~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDv 160 (294)
T 3adn_A 83 HAKHVLIIGGGDGAMLREVTRHKNV--ESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDV 160 (294)
T ss_dssp TCCEEEEESCTTCHHHHHHHTCTTC--CEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEE
T ss_pred CCCEEEEEeCChhHHHHHHHhCCCC--CEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccE
Confidence 4689999999999999999887 44 34445555556888876641 0 11111 222222223478999
Q ss_pred eeeccccccCCC-CcCHHHHHHHHhhcccCCcEEEEEe-----CHHHHHHHHHHHhcCCCceEEecc--CCCCCCcceEE
Q 006662 543 IHADSIFSLYKD-RCEMEDVLLEMDRILRPEGSVIIRD-----DVDILVKIKSITDGMEWEGRIADH--ENGPRQREKIL 614 (636)
Q Consensus 543 ~H~~~~fs~~~~-~c~~~~~l~e~dRiLrPgG~~i~~d-----~~~~~~~~~~~~~~~~W~~~~~~~--e~~~~~~~~~l 614 (636)
|-++..-..... .-.-..++-++-|+|+|||.+++.. ..+.+..+.+.++..--.+..... -..|.+...++
T Consensus 161 Ii~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~s~~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~~p~g~~~f~ 240 (294)
T 3adn_A 161 IISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLSHYFSDVGFYQAAIPTYYGGIMTFA 240 (294)
T ss_dssp EEECC----------CCHHHHHHHHHTEEEEEEEEEEEEECSSCCHHHHHHHHHHHHHCSEEEEEEEECTTSSSSEEEEE
T ss_pred EEECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEecCCcccchHHHHHHHHHHHHHCCCeEEEEEEecccCCCceEEE
Confidence 988543221111 1112678999999999999999962 223333333333332223332211 11222345788
Q ss_pred EEEecC
Q 006662 615 FANKKY 620 (636)
Q Consensus 615 ~~~K~~ 620 (636)
+|.|.+
T Consensus 241 ~as~~~ 246 (294)
T 3adn_A 241 WATDND 246 (294)
T ss_dssp EEESCT
T ss_pred EEeCCc
Confidence 898865
No 460
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=97.74 E-value=1.1e-05 Score=78.78 Aligned_cols=142 Identities=13% Similarity=0.090 Sum_probs=94.1
Q ss_pred HHHhhhccCCCCCcceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhhc----ccchhhcccccc-CCCCC
Q 006662 464 YKSVDYQLAQPGRYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERG----LIGTYQNWCEAM-STYPR 538 (636)
Q Consensus 464 y~~~~~~l~~~~~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRg----li~~~~~~ce~~-~~yp~ 538 (636)
|......+.. ..+|||+|||+|.+|.++....=-+ .+..+|-++.++.++.++- +-.-+.- ++.. ...|.
T Consensus 40 Y~~~~~~l~~---~~~VLDlGCG~GplAl~l~~~~p~a-~~~A~Di~~~~leiar~~~~~~g~~~~v~~-~d~~~~~~~~ 114 (200)
T 3fzg_A 40 YTYVFGNIKH---VSSILDFGCGFNPLALYQWNENEKI-IYHAYDIDRAEIAFLSSIIGKLKTTIKYRF-LNKESDVYKG 114 (200)
T ss_dssp HHHHHHHSCC---CSEEEEETCTTHHHHHHHHCSSCCC-EEEEECSCHHHHHHHHHHHHHSCCSSEEEE-ECCHHHHTTS
T ss_pred HHHHHhhcCC---CCeEEEecCCCCHHHHHHHhcCCCC-EEEEEeCCHHHHHHHHHHHHhcCCCccEEE-ecccccCCCC
Confidence 4444444544 7799999999999999996652112 6677788888999888763 3211111 2222 23458
Q ss_pred ccceeeeccccccCCCCcCHHHHHHHHhhcccCCcEEEEEeC-----------HHHHHHHHHHHhcCCCceEEeccCCCC
Q 006662 539 TYDLIHADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDD-----------VDILVKIKSITDGMEWEGRIADHENGP 607 (636)
Q Consensus 539 t~Dl~H~~~~fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~-----------~~~~~~~~~~~~~~~W~~~~~~~e~~~ 607 (636)
+||+|-+..++-...++ +..+.++-+.|||||.||--+. ..+-...++.+..=.|.+...+..
T Consensus 115 ~~DvVLa~k~LHlL~~~---~~al~~v~~~L~pggvfISfptksl~Gr~~gm~~~Y~~~~~~~~~~~~~~~~~~~~~--- 188 (200)
T 3fzg_A 115 TYDVVFLLKMLPVLKQQ---DVNILDFLQLFHTQNFVISFPIKSLSGKEKGMEENYQLWFESFTKGWIKILDSKVIG--- 188 (200)
T ss_dssp EEEEEEEETCHHHHHHT---TCCHHHHHHTCEEEEEEEEEECCCCC--CTTCCCCHHHHHHHHTTTTSCEEEEEEET---
T ss_pred CcChhhHhhHHHhhhhh---HHHHHHHHHHhCCCCEEEEeChHHhcCCCcchhhhHHHHHHHhccCcceeeeeeeeC---
Confidence 89987775555433322 4566689999999999998762 126677788888888888766544
Q ss_pred CCcceEEEEEe
Q 006662 608 RQREKILFANK 618 (636)
Q Consensus 608 ~~~~~~l~~~K 618 (636)
.|-+-|.+|
T Consensus 189 --nEl~y~~~~ 197 (200)
T 3fzg_A 189 --NELVYITSG 197 (200)
T ss_dssp --TEEEEEECC
T ss_pred --ceEEEEEec
Confidence 466666655
No 461
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=97.72 E-value=9.4e-06 Score=84.55 Aligned_cols=95 Identities=16% Similarity=-0.005 Sum_probs=63.3
Q ss_pred CcceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhh----cc--cchhh-ccccccCCCCCccceeeeccc
Q 006662 476 RYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GL--IGTYQ-NWCEAMSTYPRTYDLIHADSI 548 (636)
Q Consensus 476 ~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl--i~~~~-~~ce~~~~yp~t~Dl~H~~~~ 548 (636)
...+|||+|||.|.++..|++..--.-+|+.+|.++.++..+.++ |+ +-+.+ |..+ ..+-+..||+|.+++.
T Consensus 75 ~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~-~~~~~~~fD~Iv~~~~ 153 (317)
T 1dl5_A 75 KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYY-GVPEFSPYDVIFVTVG 153 (317)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGG-CCGGGCCEEEEEECSB
T ss_pred CcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhh-ccccCCCeEEEEEcCC
Confidence 356899999999999999876411001345556666788887766 55 22222 2211 1111378999999887
Q ss_pred cccCCCCcCHHHHHHHHhhcccCCcEEEEEeC
Q 006662 549 FSLYKDRCEMEDVLLEMDRILRPEGSVIIRDD 580 (636)
Q Consensus 549 fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~ 580 (636)
+.... -++.|+|||||.+++...
T Consensus 154 ~~~~~---------~~~~~~LkpgG~lvi~~~ 176 (317)
T 1dl5_A 154 VDEVP---------ETWFTQLKEGGRVIVPIN 176 (317)
T ss_dssp BSCCC---------HHHHHHEEEEEEEEEEBC
T ss_pred HHHHH---------HHHHHhcCCCcEEEEEEC
Confidence 76432 478899999999999754
No 462
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=97.71 E-value=9.6e-05 Score=83.02 Aligned_cols=114 Identities=13% Similarity=0.079 Sum_probs=77.8
Q ss_pred HHHHHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhc-----------------CCEEEEcCcCCchHHHHHHHHHc--
Q 006662 202 DAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR-----------------NILAVSFAPRDTHEAQVQFALER-- 262 (636)
Q Consensus 202 ~~~id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~-----------------~v~vv~i~p~Dis~a~l~~A~er-- 262 (636)
...++.+.+++.... .+|||.+||+|.+...+++. .. .+.+.|+++.+++.|+.+
T Consensus 231 ~~Vv~lmv~ll~p~~---~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~---~i~G~Eid~~~~~lA~~Nl~ 304 (544)
T 3khk_A 231 KSIVTLIVEMLEPYK---GRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQI---SVYGQESNPTTWKLAAMNMV 304 (544)
T ss_dssp HHHHHHHHHHHCCCS---EEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGE---EEEECCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCC---CeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhc---eEEEEeCCHHHHHHHHHHHH
Confidence 456677777765332 28999999999998877542 22 344448899998888643
Q ss_pred --CCCeEE--EEeccccCC-CCCCCeeEEEecccccc--ccc-------------------------Ch-HHHHHHHHhc
Q 006662 263 --GVPALI--GVMASIRLP-YPSRAFDMAHCSRCLIP--WGQ-------------------------YD-GLYLIEVDRV 309 (636)
Q Consensus 263 --g~~~~~--~~~d~~~Lp-f~~~sFDlV~~s~~L~h--~~~-------------------------d~-~~~L~el~Rv 309 (636)
++...+ ..+|....+ ++...||+|+++.-+.. |.. +. -.++..+.+.
T Consensus 305 l~gi~~~i~i~~gDtL~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~ 384 (544)
T 3khk_A 305 IRGIDFNFGKKNADSFLDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYH 384 (544)
T ss_dssp HTTCCCBCCSSSCCTTTSCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHT
T ss_pred HhCCCcccceeccchhcCcccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHH
Confidence 443333 555655444 45678999999765532 210 00 2688999999
Q ss_pred ccCCcEEEEEeC
Q 006662 310 LRPGGYWILSGP 321 (636)
Q Consensus 310 LKPGG~Liis~p 321 (636)
|+|||++++..|
T Consensus 385 Lk~gGr~aiVlP 396 (544)
T 3khk_A 385 LAPTGSMALLLA 396 (544)
T ss_dssp EEEEEEEEEEEE
T ss_pred hccCceEEEEec
Confidence 999999999976
No 463
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=97.71 E-value=0.00016 Score=69.54 Aligned_cols=117 Identities=13% Similarity=0.085 Sum_probs=81.4
Q ss_pred CcceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhh----cc-cchhhccccccCCCCCccceeeeccccc
Q 006662 476 RYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GL-IGTYQNWCEAMSTYPRTYDLIHADSIFS 550 (636)
Q Consensus 476 ~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl-i~~~~~~ce~~~~yp~t~Dl~H~~~~fs 550 (636)
...+|||+|||.|.++.+|++.+. -+|+.+|.++.++..+.++ |+ +.++ +..+..+|.+||+|-++..|.
T Consensus 49 ~~~~vlD~g~G~G~~~~~l~~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~---~~d~~~~~~~~D~v~~~~p~~ 123 (207)
T 1wy7_A 49 EGKVVADLGAGTGVLSYGALLLGA--KEVICVEVDKEAVDVLIENLGEFKGKFKVF---IGDVSEFNSRVDIVIMNPPFG 123 (207)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTC--SEEEEEESCHHHHHHHHHHTGGGTTSEEEE---ESCGGGCCCCCSEEEECCCCS
T ss_pred CcCEEEEeeCCCCHHHHHHHHcCC--CEEEEEECCHHHHHHHHHHHHHcCCCEEEE---ECchHHcCCCCCEEEEcCCCc
Confidence 356899999999999999987753 2566677776788777765 22 2222 233444678999999988776
Q ss_pred cCCCCcCHHHHHHHHhhcccCCcEEEEE-eCHHHHHHHHHHHhcCCCceEE
Q 006662 551 LYKDRCEMEDVLLEMDRILRPEGSVIIR-DDVDILVKIKSITDGMEWEGRI 600 (636)
Q Consensus 551 ~~~~~c~~~~~l~e~dRiLrPgG~~i~~-d~~~~~~~~~~~~~~~~W~~~~ 600 (636)
..... ....++-++-|+| ||.+++. ........+.+++....|++..
T Consensus 124 ~~~~~-~~~~~l~~~~~~l--~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ 171 (207)
T 1wy7_A 124 SQRKH-ADRPFLLKAFEIS--DVVYSIHLAKPEVRRFIEKFSWEHGFVVTH 171 (207)
T ss_dssp SSSTT-TTHHHHHHHHHHC--SEEEEEEECCHHHHHHHHHHHHHTTEEEEE
T ss_pred cccCC-chHHHHHHHHHhc--CcEEEEEeCCcCCHHHHHHHHHHCCCeEEE
Confidence 55433 3356788889998 5555444 2666777788888887777654
No 464
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=97.71 E-value=2e-05 Score=85.52 Aligned_cols=100 Identities=11% Similarity=0.058 Sum_probs=65.2
Q ss_pred CCcceEeeecccchhhhhhhcC-CCeEEEEecCCCCCccchHHHHhh-----------ccc-chhhccccccCCCC----
Q 006662 475 GRYRNLLDMNAYLGGFAAALVD-DPLWVMNTVPVEAKINTLGVIYER-----------GLI-GTYQNWCEAMSTYP---- 537 (636)
Q Consensus 475 ~~~r~vlD~~~g~ggfaa~l~~-~~v~~mnv~~~~~~~~~l~~~~eR-----------gli-~~~~~~ce~~~~yp---- 537 (636)
....+|||+|||+|.++..|+. .+. -.|+.+|.++.++.++.+. |+- +-+.-.+..+...|
T Consensus 172 ~~gd~VLDLGCGtG~l~l~lA~~~g~--~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~lp~~d~ 249 (438)
T 3uwp_A 172 TDDDLFVDLGSGVGQVVLQVAAATNC--KHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLSEEWRER 249 (438)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHCCC--SEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTTSHHHHHH
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHCCC--CEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcccCCccccc
Confidence 3467899999999999987764 343 1356667776677766542 331 11111123343333
Q ss_pred -CccceeeeccccccCCCCcCHHHHHHHHhhcccCCcEEEEEeC
Q 006662 538 -RTYDLIHADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDD 580 (636)
Q Consensus 538 -~t~Dl~H~~~~fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~ 580 (636)
..||+|-++.++ + .-++...|.|+.|+|||||.||+.+.
T Consensus 250 ~~~aDVVf~Nn~~--F--~pdl~~aL~Ei~RvLKPGGrIVssE~ 289 (438)
T 3uwp_A 250 IANTSVIFVNNFA--F--GPEVDHQLKERFANMKEGGRIVSSKP 289 (438)
T ss_dssp HHTCSEEEECCTT--C--CHHHHHHHHHHHTTSCTTCEEEESSC
T ss_pred cCCccEEEEcccc--c--CchHHHHHHHHHHcCCCCcEEEEeec
Confidence 368888775542 1 13567888999999999999999854
No 465
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=97.70 E-value=1.3e-05 Score=85.12 Aligned_cols=97 Identities=14% Similarity=0.209 Sum_probs=63.9
Q ss_pred CCcceEeeecccchhhhhhhcCC--CeEEEEecCCCCCccchHHHHhhcccchhhccccccCCCCCccceeeeccccccC
Q 006662 475 GRYRNLLDMNAYLGGFAAALVDD--PLWVMNTVPVEAKINTLGVIYERGLIGTYQNWCEAMSTYPRTYDLIHADSIFSLY 552 (636)
Q Consensus 475 ~~~r~vlD~~~g~ggfaa~l~~~--~v~~mnv~~~~~~~~~l~~~~eRgli~~~~~~ce~~~~yp~t~Dl~H~~~~fs~~ 552 (636)
....+|||+|||.|.++.+|+++ .+ .++..|. +.++..+.+..-+-... +..+.++|. ||+|.+..++..+
T Consensus 208 ~~~~~vLDvG~G~G~~~~~l~~~~~~~---~~~~~D~-~~~~~~a~~~~~v~~~~--~d~~~~~~~-~D~v~~~~~lh~~ 280 (372)
T 1fp1_D 208 EGISTLVDVGGGSGRNLELIISKYPLI---KGINFDL-PQVIENAPPLSGIEHVG--GDMFASVPQ-GDAMILKAVCHNW 280 (372)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTC---EEEEEEC-HHHHTTCCCCTTEEEEE--CCTTTCCCC-EEEEEEESSGGGS
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHCCCC---eEEEeCh-HHHHHhhhhcCCCEEEe--CCcccCCCC-CCEEEEecccccC
Confidence 44689999999999999999764 33 2333344 24554443321122111 122345666 9999998887655
Q ss_pred CCCcCHHHHHHHHhhcccCCcEEEEEe
Q 006662 553 KDRCEMEDVLLEMDRILRPEGSVIIRD 579 (636)
Q Consensus 553 ~~~c~~~~~l~e~dRiLrPgG~~i~~d 579 (636)
.+. ....+|-++-|+|||||.++|.|
T Consensus 281 ~d~-~~~~~l~~~~~~L~pgG~l~i~e 306 (372)
T 1fp1_D 281 SDE-KCIEFLSNCHKALSPNGKVIIVE 306 (372)
T ss_dssp CHH-HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CHH-HHHHHHHHHHHhcCCCCEEEEEE
Confidence 432 23489999999999999999974
No 466
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=97.69 E-value=4.7e-05 Score=76.89 Aligned_cols=109 Identities=17% Similarity=0.188 Sum_probs=72.2
Q ss_pred cceEeeecccchhhhhhhcCC--CeEEEEecCCCCCccchHHHHhh-----c-c---cchhh-ccccccCCC-CCcccee
Q 006662 477 YRNLLDMNAYLGGFAAALVDD--PLWVMNTVPVEAKINTLGVIYER-----G-L---IGTYQ-NWCEAMSTY-PRTYDLI 543 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~~--~v~~mnv~~~~~~~~~l~~~~eR-----g-l---i~~~~-~~ce~~~~y-p~t~Dl~ 543 (636)
..+|||+|||.|.++.+|++. +- .+|+.+|.++..+..+.++ | + +-+.+ |..+. .+ +.+||+|
T Consensus 100 ~~~vLdiG~G~G~~~~~l~~~~~~~--~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~--~~~~~~~D~v 175 (280)
T 1i9g_A 100 GARVLEAGAGSGALTLSLLRAVGPA--GQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADS--ELPDGSVDRA 175 (280)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTT--SEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGC--CCCTTCEEEE
T ss_pred CCEEEEEcccccHHHHHHHHHhCCC--CEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhc--CCCCCceeEE
Confidence 568999999999999999864 21 2455667766788877765 4 2 22222 33322 24 3789998
Q ss_pred eeccccccCCCCcCHHHHHHHHhhcccCCcEEEEEeC-HHHHHHHHHHHhc-CCCc
Q 006662 544 HADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDD-VDILVKIKSITDG-MEWE 597 (636)
Q Consensus 544 H~~~~fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~-~~~~~~~~~~~~~-~~W~ 597 (636)
-++ --+...+|-++-|+|+|||.+++... .+.+.++.+.++. ..|.
T Consensus 176 ~~~--------~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~l~~~~~f~ 223 (280)
T 1i9g_A 176 VLD--------MLAPWEVLDAVSRLLVAGGVLMVYVATVTQLSRIVEALRAKQCWT 223 (280)
T ss_dssp EEE--------SSCGGGGHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHHSSBC
T ss_pred EEC--------CcCHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhcCCcC
Confidence 772 22445889999999999999999764 3445555444443 4443
No 467
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=97.68 E-value=2.1e-05 Score=83.84 Aligned_cols=103 Identities=16% Similarity=0.189 Sum_probs=64.6
Q ss_pred CCcEEEEeCCCCcHHHHHHhhc--------------------CCEEEEcCcCCchHHHHHHHH-HcCCCeEEEEec---c
Q 006662 218 SIRTAIDTGCGVASWGAYLMSR--------------------NILAVSFAPRDTHEAQVQFAL-ERGVPALIGVMA---S 273 (636)
Q Consensus 218 ~~r~VLDIGCGtG~~a~~La~~--------------------~v~vv~i~p~Dis~a~l~~A~-erg~~~~~~~~d---~ 273 (636)
...+|+|+||++|..+..+... .+...|+...|.+.-...... ....+..+..+. .
T Consensus 51 ~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSF 130 (359)
T 1m6e_X 51 TRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSF 130 (359)
T ss_dssp SEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCS
T ss_pred CceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhh
Confidence 3467999999999766655433 112334445555433222111 000022333332 3
Q ss_pred ccCCCCCCCeeEEEecccccccccCh---------------------------------HHHHHHHHhcccCCcEEEEEe
Q 006662 274 IRLPYPSRAFDMAHCSRCLIPWGQYD---------------------------------GLYLIEVDRVLRPGGYWILSG 320 (636)
Q Consensus 274 ~~Lpf~~~sFDlV~~s~~L~h~~~d~---------------------------------~~~L~el~RvLKPGG~Liis~ 320 (636)
....||+++||+|+++.+| ||..+. ..+|+...+.|+|||.+++..
T Consensus 131 y~rlfp~~S~d~v~Ss~aL-HWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~ 209 (359)
T 1m6e_X 131 YGRLFPRNTLHFIHSSYSL-MWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTI 209 (359)
T ss_dssp SSCCSCTTCBSCEEEESCT-TBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEE
T ss_pred hhccCCCCceEEEEehhhh-hhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEE
Confidence 3456899999999999999 886442 134888899999999999985
Q ss_pred C
Q 006662 321 P 321 (636)
Q Consensus 321 p 321 (636)
.
T Consensus 210 ~ 210 (359)
T 1m6e_X 210 L 210 (359)
T ss_dssp E
T ss_pred e
Confidence 4
No 468
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=97.67 E-value=4.9e-05 Score=77.37 Aligned_cols=81 Identities=17% Similarity=0.144 Sum_probs=58.3
Q ss_pred HHHhhccCCCCCcEEEEeCCCCcHHHHHHhhcCCEEEEcCcCCchH-------HHHHHHHHc----C--CCeEEEEeccc
Q 006662 208 IGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHE-------AQVQFALER----G--VPALIGVMASI 274 (636)
Q Consensus 208 L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~~v~vv~i~p~Dis~-------a~l~~A~er----g--~~~~~~~~d~~ 274 (636)
+.+.+...++. +|||+|||+|.++..+++.+..++++ |+++ .+++.|+++ + ..+.+..+|..
T Consensus 75 l~~a~~~~~~~--~VLDlgcG~G~~a~~lA~~g~~V~~v---D~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~ 149 (258)
T 2r6z_A 75 IAKAVNHTAHP--TVWDATAGLGRDSFVLASLGLTVTAF---EQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAA 149 (258)
T ss_dssp HHHHTTGGGCC--CEEETTCTTCHHHHHHHHTTCCEEEE---ECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHH
T ss_pred HHHHhCcCCcC--eEEEeeCccCHHHHHHHHhCCEEEEE---ECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHH
Confidence 44444333333 89999999999999999987777777 8888 888877643 2 23788888876
Q ss_pred cC-C-CCC--CCeeEEEeccccc
Q 006662 275 RL-P-YPS--RAFDMAHCSRCLI 293 (636)
Q Consensus 275 ~L-p-f~~--~sFDlV~~s~~L~ 293 (636)
.+ + +++ ++||+|++...+.
T Consensus 150 ~~l~~~~~~~~~fD~V~~dP~~~ 172 (258)
T 2r6z_A 150 EQMPALVKTQGKPDIVYLDPMYP 172 (258)
T ss_dssp HHHHHHHHHHCCCSEEEECCCC-
T ss_pred HHHHhhhccCCCccEEEECCCCC
Confidence 63 3 444 6899999976653
No 469
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=97.67 E-value=3.6e-05 Score=81.87 Aligned_cols=97 Identities=15% Similarity=0.216 Sum_probs=64.1
Q ss_pred CCcceEeeecccchhhhhhhcCC--CeEEEEecCCCCCccchHHHHhhcccchhhccccccCCCCCccceeeeccccccC
Q 006662 475 GRYRNLLDMNAYLGGFAAALVDD--PLWVMNTVPVEAKINTLGVIYERGLIGTYQNWCEAMSTYPRTYDLIHADSIFSLY 552 (636)
Q Consensus 475 ~~~r~vlD~~~g~ggfaa~l~~~--~v~~mnv~~~~~~~~~l~~~~eRgli~~~~~~ce~~~~yp~t~Dl~H~~~~fs~~ 552 (636)
...+.|||+|||.|.++.+|++. .+ .++..|.+ .++..+.++.-+.... ...|.++|.. |+|.+..++-.+
T Consensus 202 ~~~~~vlDvG~G~G~~~~~l~~~~p~~---~~~~~D~~-~~~~~a~~~~~v~~~~--~d~~~~~p~~-D~v~~~~vlh~~ 274 (368)
T 3reo_A 202 EGLTTIVDVGGGTGAVASMIVAKYPSI---NAINFDLP-HVIQDAPAFSGVEHLG--GDMFDGVPKG-DAIFIKWICHDW 274 (368)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTC---EEEEEECH-HHHTTCCCCTTEEEEE--CCTTTCCCCC-SEEEEESCGGGB
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCC---EEEEEehH-HHHHhhhhcCCCEEEe--cCCCCCCCCC-CEEEEechhhcC
Confidence 55789999999999999999763 33 22333432 4444443332122221 1234467755 999988877655
Q ss_pred CCCcCHHHHHHHHhhcccCCcEEEEEe
Q 006662 553 KDRCEMEDVLLEMDRILRPEGSVIIRD 579 (636)
Q Consensus 553 ~~~c~~~~~l~e~dRiLrPgG~~i~~d 579 (636)
.+. +...+|-++-|+|||||.++|.|
T Consensus 275 ~~~-~~~~~l~~~~~~L~pgG~l~i~e 300 (368)
T 3reo_A 275 SDE-HCLKLLKNCYAALPDHGKVIVAE 300 (368)
T ss_dssp CHH-HHHHHHHHHHHHSCTTCEEEEEE
T ss_pred CHH-HHHHHHHHHHHHcCCCCEEEEEE
Confidence 432 34589999999999999999975
No 470
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=97.66 E-value=1.2e-05 Score=79.72 Aligned_cols=92 Identities=16% Similarity=0.153 Sum_probs=61.1
Q ss_pred CcceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhh----cc--cchhhccccccCCCC-C-ccceeeecc
Q 006662 476 RYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GL--IGTYQNWCEAMSTYP-R-TYDLIHADS 547 (636)
Q Consensus 476 ~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl--i~~~~~~ce~~~~yp-~-t~Dl~H~~~ 547 (636)
...+|||+|||.|.+++.|++..- .+|+.+|.++..+..+.++ |+ +.+.. +.....+| . .||+|.++.
T Consensus 91 ~~~~vLdiG~G~G~~~~~la~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~--~d~~~~~~~~~~fD~Ii~~~ 166 (235)
T 1jg1_A 91 PGMNILEVGTGSGWNAALISEIVK--TDVYTIERIPELVEFAKRNLERAGVKNVHVIL--GDGSKGFPPKAPYDVIIVTA 166 (235)
T ss_dssp TTCCEEEECCTTSHHHHHHHHHHC--SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEE--SCGGGCCGGGCCEEEEEECS
T ss_pred CCCEEEEEeCCcCHHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEE--CCcccCCCCCCCccEEEECC
Confidence 356899999999999999977520 2445556555677777664 33 22211 12234555 3 499999876
Q ss_pred ccccCCCCcCHHHHHHHHhhcccCCcEEEEEeC
Q 006662 548 IFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDD 580 (636)
Q Consensus 548 ~fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~ 580 (636)
.+... .-++-|+|||||.+++.-.
T Consensus 167 ~~~~~---------~~~~~~~L~pgG~lvi~~~ 190 (235)
T 1jg1_A 167 GAPKI---------PEPLIEQLKIGGKLIIPVG 190 (235)
T ss_dssp BBSSC---------CHHHHHTEEEEEEEEEEEC
T ss_pred cHHHH---------HHHHHHhcCCCcEEEEEEe
Confidence 65432 2378899999999999754
No 471
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=97.66 E-value=0.00012 Score=79.03 Aligned_cols=93 Identities=14% Similarity=0.092 Sum_probs=68.8
Q ss_pred cEEEEeCCCCcHHHHHHhhc--C-CEEEEcCcCCchHHHHHHHHHc----CCC---eEEEEeccccC-C-CCCCCeeEEE
Q 006662 220 RTAIDTGCGVASWGAYLMSR--N-ILAVSFAPRDTHEAQVQFALER----GVP---ALIGVMASIRL-P-YPSRAFDMAH 287 (636)
Q Consensus 220 r~VLDIGCGtG~~a~~La~~--~-v~vv~i~p~Dis~a~l~~A~er----g~~---~~~~~~d~~~L-p-f~~~sFDlV~ 287 (636)
.+|||++||+|.++..++.+ + ..++.+ |+++.+++.++++ +.. +.+..+|...+ . ...+.||+|+
T Consensus 54 ~~VLDlfaGtG~~sl~aa~~~~ga~~V~av---Di~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~ 130 (392)
T 3axs_A 54 VKVADPLSASGIRAIRFLLETSCVEKAYAN---DISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVD 130 (392)
T ss_dssp EEEEESSCTTSHHHHHHHHHCSCEEEEEEE---CSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEE
T ss_pred CEEEECCCcccHHHHHHHHhCCCCCEEEEE---ECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEE
Confidence 48999999999999999985 4 244555 8888888877644 443 67777776443 1 1245799999
Q ss_pred ecccccccccChHHHHHHHHhcccCCcEEEEEe
Q 006662 288 CSRCLIPWGQYDGLYLIEVDRVLRPGGYWILSG 320 (636)
Q Consensus 288 ~s~~L~h~~~d~~~~L~el~RvLKPGG~Liis~ 320 (636)
+.. + ..+..++..+.+.|+|||+++++.
T Consensus 131 lDP----~-g~~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 131 LDP----F-GTPVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp ECC----S-SCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred ECC----C-cCHHHHHHHHHHHhCCCCEEEEEe
Confidence 854 1 133578999999999999998875
No 472
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=97.65 E-value=0.00011 Score=75.48 Aligned_cols=142 Identities=15% Similarity=0.123 Sum_probs=82.7
Q ss_pred CcceEeeecccchhhhhhhcCC-CeEEEEecCCCCCccchHHHHhhc------c----cchhh-ccccccCCCCCcccee
Q 006662 476 RYRNLLDMNAYLGGFAAALVDD-PLWVMNTVPVEAKINTLGVIYERG------L----IGTYQ-NWCEAMSTYPRTYDLI 543 (636)
Q Consensus 476 ~~r~vlD~~~g~ggfaa~l~~~-~v~~mnv~~~~~~~~~l~~~~eRg------l----i~~~~-~~ce~~~~yp~t~Dl~ 543 (636)
..++|||+|||.|+++..+++. ++ .+|+-+|..+..+.++.++= + +-+++ |..+.....+.+||+|
T Consensus 78 ~~~~VLdiG~G~G~~~~~l~~~~~~--~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 155 (283)
T 2i7c_A 78 EPKNVLVVGGGDGGIIRELCKYKSV--ENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVI 155 (283)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTC--CEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEE
T ss_pred CCCeEEEEeCCcCHHHHHHHHcCCC--CEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEE
Confidence 3579999999999999999877 34 45556666656777776641 1 11111 1111112236889999
Q ss_pred eeccccccCCCCcCH-HHHHHHHhhcccCCcEEEEEe-----CHHHHHHHHHHHhcCCCceEEeccCCCCC--CcceEEE
Q 006662 544 HADSIFSLYKDRCEM-EDVLLEMDRILRPEGSVIIRD-----DVDILVKIKSITDGMEWEGRIADHENGPR--QREKILF 615 (636)
Q Consensus 544 H~~~~fs~~~~~c~~-~~~l~e~dRiLrPgG~~i~~d-----~~~~~~~~~~~~~~~~W~~~~~~~e~~~~--~~~~~l~ 615 (636)
-++.........-.. ..++-++-|+|+|||.+++.. ..+.+..+.+.+++.--.+......--.. +.-.+++
T Consensus 156 i~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vP~y~~g~~g~~~ 235 (283)
T 2i7c_A 156 IVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYAKKLFKKVEYANISIPTYPCGCIGILC 235 (283)
T ss_dssp EEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTTCSEEEEEEEECTTSGGGEEEEEE
T ss_pred EEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEECCCcccCHHHHHHHHHHHHHHCCceEEEEEEcCCcCCCcEEEEE
Confidence 986432221111111 689999999999999999973 22344444444444433333322111111 2235778
Q ss_pred EEec
Q 006662 616 ANKK 619 (636)
Q Consensus 616 ~~K~ 619 (636)
|.|.
T Consensus 236 ~s~~ 239 (283)
T 2i7c_A 236 CSKT 239 (283)
T ss_dssp EESS
T ss_pred EeCC
Confidence 8876
No 473
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=97.64 E-value=4.6e-05 Score=75.95 Aligned_cols=95 Identities=11% Similarity=0.121 Sum_probs=63.1
Q ss_pred cceEeeecccchhhhhhhcCC-C-eEEEEecCCCCCccchHHHHhh----cc---cchhh-ccccccCCC------CCcc
Q 006662 477 YRNLLDMNAYLGGFAAALVDD-P-LWVMNTVPVEAKINTLGVIYER----GL---IGTYQ-NWCEAMSTY------PRTY 540 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~~-~-v~~mnv~~~~~~~~~l~~~~eR----gl---i~~~~-~~ce~~~~y------p~t~ 540 (636)
.++|||+|||.|..+.+|++. + - -.|+.+|.++..+.++.++ |+ |-+++ |..+.+..+ +.+|
T Consensus 71 ~~~VLeiG~G~G~~~~~la~~~~~~--~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~f 148 (237)
T 3c3y_A 71 AKKTIEVGVFTGYSLLLTALSIPDD--GKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGSY 148 (237)
T ss_dssp CCEEEEECCTTSHHHHHHHHHSCTT--CEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCE
T ss_pred CCEEEEeCCCCCHHHHHHHHhCCCC--CEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCc
Confidence 568999999999999888753 1 1 2344556665677766543 55 22222 333322233 4789
Q ss_pred ceeeeccccccCCCCcCHHHHHHHHhhcccCCcEEEEEe
Q 006662 541 DLIHADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRD 579 (636)
Q Consensus 541 Dl~H~~~~fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d 579 (636)
|+|.+++- .-....++-++-|+|||||.+++.+
T Consensus 149 D~I~~d~~------~~~~~~~l~~~~~~L~pGG~lv~d~ 181 (237)
T 3c3y_A 149 DFGFVDAD------KPNYIKYHERLMKLVKVGGIVAYDN 181 (237)
T ss_dssp EEEEECSC------GGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred CEEEECCc------hHHHHHHHHHHHHhcCCCeEEEEec
Confidence 99987532 1245788999999999999999864
No 474
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=97.63 E-value=4.9e-05 Score=81.71 Aligned_cols=121 Identities=16% Similarity=0.183 Sum_probs=76.0
Q ss_pred cceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhh----cc-c---chhh-ccccccCCC---CCccceee
Q 006662 477 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GL-I---GTYQ-NWCEAMSTY---PRTYDLIH 544 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl-i---~~~~-~~ce~~~~y---p~t~Dl~H 544 (636)
..+|||+|||+|+|+.++++.+. -.|+.+|.++..+..+.+. |+ - -+++ |.-+..... ...||+|.
T Consensus 221 ~~~VLDl~cG~G~~sl~la~~g~--~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii 298 (396)
T 3c0k_A 221 NKRVLNCFSYTGGFAVSALMGGC--SQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIV 298 (396)
T ss_dssp TCEEEEESCTTCSHHHHHHHTTC--SEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred CCeEEEeeccCCHHHHHHHHCCC--CEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEEE
Confidence 46899999999999999988752 3566667776677666553 43 2 1121 111111111 35899999
Q ss_pred ecccccc------CCCCcCHHHHHHHHhhcccCCcEEEEEeCH------HHHHHHHHHHhcCCCceE
Q 006662 545 ADSIFSL------YKDRCEMEDVLLEMDRILRPEGSVIIRDDV------DILVKIKSITDGMEWEGR 599 (636)
Q Consensus 545 ~~~~fs~------~~~~c~~~~~l~e~dRiLrPgG~~i~~d~~------~~~~~~~~~~~~~~W~~~ 599 (636)
++--+.. .........++.++-++|+|||.++++... +....+++.+.....+..
T Consensus 299 ~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~ 365 (396)
T 3c0k_A 299 MDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGLMTSDLFQKIIADAAIDAGRDVQ 365 (396)
T ss_dssp ECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCEE
T ss_pred ECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCCHHHHHHHHHHHHHHcCCeEE
Confidence 8643211 112245678999999999999999997432 344555555555544444
No 475
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=97.63 E-value=1.8e-05 Score=87.53 Aligned_cols=96 Identities=18% Similarity=0.178 Sum_probs=65.6
Q ss_pred CcceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhh----cc---cchhh-ccccccCCCCCccceeeecc
Q 006662 476 RYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GL---IGTYQ-NWCEAMSTYPRTYDLIHADS 547 (636)
Q Consensus 476 ~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl---i~~~~-~~ce~~~~yp~t~Dl~H~~~ 547 (636)
...+|||+|||.|.++..|++.+. ..|+.+|.+. ++..+.++ |+ +-+++ |+-+ + .+|..||+|-++.
T Consensus 158 ~~~~VLDiGcGtG~la~~la~~~~--~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~-~-~~~~~fD~Ivs~~ 232 (480)
T 3b3j_A 158 KDKIVLDVGCGSGILSFFAAQAGA--RKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEE-V-SLPEQVDIIISEP 232 (480)
T ss_dssp TTCEEEEESCSTTHHHHHHHHTTC--SEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTT-C-CCSSCEEEEECCC
T ss_pred CCCEEEEecCcccHHHHHHHHcCC--CEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhh-C-ccCCCeEEEEEeC
Confidence 357999999999999999987754 3556666664 66555443 55 33333 2222 1 3568899999977
Q ss_pred ccccCCCCcCHHHHHHHHhhcccCCcEEEE
Q 006662 548 IFSLYKDRCEMEDVLLEMDRILRPEGSVII 577 (636)
Q Consensus 548 ~fs~~~~~c~~~~~l~e~dRiLrPgG~~i~ 577 (636)
++..... -.+...|.++.|+|+|||.+++
T Consensus 233 ~~~~~~~-e~~~~~l~~~~~~LkpgG~li~ 261 (480)
T 3b3j_A 233 MGYMLFN-ERMLESYLHAKKYLKPSGNMFP 261 (480)
T ss_dssp CHHHHTC-HHHHHHHHHGGGGEEEEEEEES
T ss_pred chHhcCc-HHHHHHHHHHHHhcCCCCEEEE
Confidence 6543322 2356677899999999999986
No 476
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=97.63 E-value=9.7e-05 Score=70.85 Aligned_cols=111 Identities=7% Similarity=-0.057 Sum_probs=71.5
Q ss_pred CcceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhhcc-cchhhccccccCCCCCccceeeeccccccCCC
Q 006662 476 RYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERGL-IGTYQNWCEAMSTYPRTYDLIHADSIFSLYKD 554 (636)
Q Consensus 476 ~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRgl-i~~~~~~ce~~~~yp~t~Dl~H~~~~fs~~~~ 554 (636)
...+|||+|||.|.++.+|++.+. ..|+.+|.++.++..+.++-- +-++ +..+..+|.+||+|-++..|....+
T Consensus 51 ~~~~vlD~gcG~G~~~~~l~~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~---~~d~~~~~~~~D~v~~~~p~~~~~~ 125 (200)
T 1ne2_A 51 GGRSVIDAGTGNGILACGSYLLGA--ESVTAFDIDPDAIETAKRNCGGVNFM---VADVSEISGKYDTWIMNPPFGSVVK 125 (200)
T ss_dssp BTSEEEEETCTTCHHHHHHHHTTB--SEEEEEESCHHHHHHHHHHCTTSEEE---ECCGGGCCCCEEEEEECCCC-----
T ss_pred CCCEEEEEeCCccHHHHHHHHcCC--CEEEEEECCHHHHHHHHHhcCCCEEE---ECcHHHCCCCeeEEEECCCchhccC
Confidence 357899999999999999987753 346667777778888877631 1222 2233335789999999888876543
Q ss_pred CcCHHHHHHHHhhcccCCcEEEEEeCHHHHHHHHHHHhcCC
Q 006662 555 RCEMEDVLLEMDRILRPEGSVIIRDDVDILVKIKSITDGME 595 (636)
Q Consensus 555 ~c~~~~~l~e~dRiLrPgG~~i~~d~~~~~~~~~~~~~~~~ 595 (636)
. ....++-++-|+| |+ +++..+......+.+++....
T Consensus 126 ~-~~~~~l~~~~~~~--g~-~~~~~~~~~~~~~~~~~~~~g 162 (200)
T 1ne2_A 126 H-SDRAFIDKAFETS--MW-IYSIGNAKARDFLRREFSARG 162 (200)
T ss_dssp ---CHHHHHHHHHHE--EE-EEEEEEGGGHHHHHHHHHHHE
T ss_pred c-hhHHHHHHHHHhc--Cc-EEEEEcCchHHHHHHHHHHCC
Confidence 2 2246788888888 55 444434445566666655544
No 477
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=97.62 E-value=4.1e-05 Score=78.38 Aligned_cols=96 Identities=8% Similarity=0.121 Sum_probs=66.3
Q ss_pred cceEeeecccchhhhhhhcCCCeEEEEecCCCC-CccchHHHHhhc---------c-------cchh-hccccccCCC--
Q 006662 477 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEA-KINTLGVIYERG---------L-------IGTY-QNWCEAMSTY-- 536 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~-~~~~l~~~~eRg---------l-------i~~~-~~~ce~~~~y-- 536 (636)
..+|||+|||.|.++.+|++.+. ..|+.+|. ++.++..+.++- + +-+. .+|.+.....
T Consensus 80 ~~~vLDlG~G~G~~~~~~a~~~~--~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 157 (281)
T 3bzb_A 80 GKTVCELGAGAGLVSIVAFLAGA--DQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQR 157 (281)
T ss_dssp TCEEEETTCTTSHHHHHHHHTTC--SEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHHH
T ss_pred CCeEEEecccccHHHHHHHHcCC--CEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHHh
Confidence 46899999999999998887753 25666777 567777765542 1 2222 3576543322
Q ss_pred ---CCccceeeeccccccCCCCcCHHHHHHHHhhccc---C--CcEEEE
Q 006662 537 ---PRTYDLIHADSIFSLYKDRCEMEDVLLEMDRILR---P--EGSVII 577 (636)
Q Consensus 537 ---p~t~Dl~H~~~~fs~~~~~c~~~~~l~e~dRiLr---P--gG~~i~ 577 (636)
+..||+|-+..++-. .-+.+.+|-++.|+|+ | ||.+++
T Consensus 158 ~~~~~~fD~Ii~~dvl~~---~~~~~~ll~~l~~~Lk~~~p~~gG~l~v 203 (281)
T 3bzb_A 158 CTGLQRFQVVLLADLLSF---HQAHDALLRSVKMLLALPANDPTAVALV 203 (281)
T ss_dssp HHSCSSBSEEEEESCCSC---GGGHHHHHHHHHHHBCCTTTCTTCEEEE
T ss_pred hccCCCCCEEEEeCcccC---hHHHHHHHHHHHHHhcccCCCCCCEEEE
Confidence 478999987454432 2346899999999999 9 997655
No 478
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=97.61 E-value=0.0019 Score=68.90 Aligned_cols=119 Identities=12% Similarity=0.050 Sum_probs=78.0
Q ss_pred CcEEEEeCCCCcHHHHHHhhcCCEEEEcCcCCchHHHHHHHHHcCCCeEEEEeccccCCCCCCCeeEEEecccccccccC
Q 006662 219 IRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALERGVPALIGVMASIRLPYPSRAFDMAHCSRCLIPWGQY 298 (636)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~~v~vv~i~p~Dis~a~l~~A~erg~~~~~~~~d~~~Lpf~~~sFDlV~~s~~L~h~~~d 298 (636)
+.+|||+||.+|.|+..+++++..+++++...+++.. .....+.+...|......+.+.||+|+|-.+ .+
T Consensus 212 G~~vlDLGAaPGGWT~~l~~rg~~V~aVD~~~l~~~l-----~~~~~V~~~~~d~~~~~~~~~~~D~vvsDm~-----~~ 281 (375)
T 4auk_A 212 GMWAVDLGACPGGWTYQLVKRNMWVYSVDNGPMAQSL-----MDTGQVTWLREDGFKFRPTRSNISWMVCDMV-----EK 281 (375)
T ss_dssp TCEEEEETCTTCHHHHHHHHTTCEEEEECSSCCCHHH-----HTTTCEEEECSCTTTCCCCSSCEEEEEECCS-----SC
T ss_pred CCEEEEeCcCCCHHHHHHHHCCCEEEEEEhhhcChhh-----ccCCCeEEEeCccccccCCCCCcCEEEEcCC-----CC
Confidence 3499999999999999999998888888655444322 2234678888888887777788999999543 35
Q ss_pred hHHHHHHHHhcccCC---cEEEEEeCCCCccccccCCCCchhhhHHHHHHHHHHHHHhceE
Q 006662 299 DGLYLIEVDRVLRPG---GYWILSGPPVNWESHWKGWNRTTEDLKSEQNGIETIARSLCWK 356 (636)
Q Consensus 299 ~~~~L~el~RvLKPG---G~Liis~p~~~w~~~~~~W~~t~e~l~~~~~~ie~la~~l~Wk 356 (636)
+...+.-+.++|..| +.++..-.+.. ...+.+......+.+.+...++.
T Consensus 282 p~~~~~l~~~wl~~~~~~~aI~~lKL~mk---------~~~~~l~~~~~~i~~~l~~~g~~ 333 (375)
T 4auk_A 282 PAKVAALMAQWLVNGWCRETIFNLKLPMK---------KRYEEVSHNLAYIQAQLDEHGIN 333 (375)
T ss_dssp HHHHHHHHHHHHHTTSCSEEEEEEECCSS---------SHHHHHHHHHHHHHHHHHHTTCC
T ss_pred hHHhHHHHHHHHhccccceEEEEEEeccc---------chHHHHHHHHHHHHHHHHhcCcc
Confidence 566666666666655 44433322211 22334444455566666655553
No 479
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=97.60 E-value=3.4e-05 Score=78.73 Aligned_cols=113 Identities=13% Similarity=0.097 Sum_probs=72.1
Q ss_pred cceEeeecccchhhhhhhcCC-CeEEEEecCCCCCccchHHHHhh----cc--cchhhccccccCCCCCccceeeecccc
Q 006662 477 YRNLLDMNAYLGGFAAALVDD-PLWVMNTVPVEAKINTLGVIYER----GL--IGTYQNWCEAMSTYPRTYDLIHADSIF 549 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~~-~v~~mnv~~~~~~~~~l~~~~eR----gl--i~~~~~~ce~~~~yp~t~Dl~H~~~~f 549 (636)
..+|||+|||+|+|+..|++. + ...|+.+|.++..+..+.+. |+ +-+++.=.+.+ ..+.+||+|-++...
T Consensus 120 ~~~VLDlgcG~G~~s~~la~~~~--~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~-~~~~~~D~Vi~d~p~ 196 (272)
T 3a27_A 120 NEVVVDMFAGIGYFTIPLAKYSK--PKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDV-ELKDVADRVIMGYVH 196 (272)
T ss_dssp TCEEEETTCTTTTTHHHHHHHTC--CSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGC-CCTTCEEEEEECCCS
T ss_pred CCEEEEecCcCCHHHHHHHHhCC--CCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHc-CccCCceEEEECCcc
Confidence 578999999999999998875 2 12345556655666666542 33 12222111222 225689999875443
Q ss_pred ccCCCCcCHHHHHHHHhhcccCCcEEEEEeCH------HHH-HHHHHHHhcCCCceE
Q 006662 550 SLYKDRCEMEDVLLEMDRILRPEGSVIIRDDV------DIL-VKIKSITDGMEWEGR 599 (636)
Q Consensus 550 s~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~~------~~~-~~~~~~~~~~~W~~~ 599 (636)
....++.++-|+|+|||.+++++.. +.. +.++.+.+.+.+++.
T Consensus 197 -------~~~~~l~~~~~~LkpgG~l~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (272)
T 3a27_A 197 -------KTHKFLDKTFEFLKDRGVIHYHETVAEKIMYERPIERLKFYAEKNGYKLI 246 (272)
T ss_dssp -------SGGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTHHHHHHHHHHHHTTEEEE
T ss_pred -------cHHHHHHHHHHHcCCCCEEEEEEcCccccccccHHHHHHHHHHHhCCeeE
Confidence 5567899999999999999998542 233 334455555555554
No 480
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=97.59 E-value=0.0003 Score=79.00 Aligned_cols=117 Identities=15% Similarity=0.130 Sum_probs=80.5
Q ss_pred HHHHHHHHHhhccC--CCCCcEEEEeCCCCcHHHHHHhhc-----CCEEEEcCcCCchHHHHHHHHHc----CC---CeE
Q 006662 202 DAYIDDIGKLINLK--DGSIRTAIDTGCGVASWGAYLMSR-----NILAVSFAPRDTHEAQVQFALER----GV---PAL 267 (636)
Q Consensus 202 ~~~id~L~~lL~l~--~g~~r~VLDIGCGtG~~a~~La~~-----~v~vv~i~p~Dis~a~l~~A~er----g~---~~~ 267 (636)
...++.+.+++... +....+|||.+||+|.+...+++. ...+.++ |+++.+.+.|+.+ +. ...
T Consensus 203 ~~Vv~lmv~ll~~~~~~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~---Eid~~~~~lA~~Nl~l~gi~~~~~~ 279 (542)
T 3lkd_A 203 QPVAKLMTQIAFLGREDKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQ---ELNTSTYNLARMNMILHGVPIENQF 279 (542)
T ss_dssp HHHHHHHHHHHHTTCTTCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEE---ESCHHHHHHHHHHHHHTTCCGGGEE
T ss_pred HHHHHHHHHHHhcccCCCCCCEEeecccchhHHHHHHHHHHHhccCceEEEE---ECcHHHHHHHHHHHHHcCCCcCccc
Confidence 44566777776522 223459999999999998888765 3444444 8888888877643 44 356
Q ss_pred EEEeccccC--C-CCCCCeeEEEeccccc-cccc--------------------C-hHHHHHHHHhccc-CCcEEEEEeC
Q 006662 268 IGVMASIRL--P-YPSRAFDMAHCSRCLI-PWGQ--------------------Y-DGLYLIEVDRVLR-PGGYWILSGP 321 (636)
Q Consensus 268 ~~~~d~~~L--p-f~~~sFDlV~~s~~L~-h~~~--------------------d-~~~~L~el~RvLK-PGG~Liis~p 321 (636)
+..+|.... | .....||+|+++.-+. .|.. + .-.++..+.+.|+ |||++.+..|
T Consensus 280 I~~gDtL~~d~p~~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP 359 (542)
T 3lkd_A 280 LHNADTLDEDWPTQEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLP 359 (542)
T ss_dssp EEESCTTTSCSCCSSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEE
T ss_pred eEecceecccccccccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEec
Confidence 778887666 3 4567899999974331 1100 0 1248899999999 9999999877
No 481
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=97.59 E-value=6.6e-05 Score=78.23 Aligned_cols=82 Identities=9% Similarity=0.075 Sum_probs=58.1
Q ss_pred HHHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhc--CCEEEEcCcCCchHHHHHHHHHcC----CCeEEEEeccccCC
Q 006662 204 YIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR--NILAVSFAPRDTHEAQVQFALERG----VPALIGVMASIRLP 277 (636)
Q Consensus 204 ~id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~--~v~vv~i~p~Dis~a~l~~A~erg----~~~~~~~~d~~~Lp 277 (636)
+.+.+.+.+...++. +|||+|||+|.++..++++ +..++++ |.++.+++.|+++. ..+.+..++...++
T Consensus 14 Ll~e~l~~L~~~~g~--~vLD~g~G~G~~s~~la~~~~~~~Vigv---D~d~~al~~A~~~~~~~g~~v~~v~~d~~~l~ 88 (301)
T 1m6y_A 14 MVREVIEFLKPEDEK--IILDCTVGEGGHSRAILEHCPGCRIIGI---DVDSEVLRIAEEKLKEFSDRVSLFKVSYREAD 88 (301)
T ss_dssp THHHHHHHHCCCTTC--EEEETTCTTSHHHHHHHHHCTTCEEEEE---ESCHHHHHHHHHHTGGGTTTEEEEECCGGGHH
T ss_pred HHHHHHHhcCCCCCC--EEEEEeCCcCHHHHHHHHHCCCCEEEEE---ECCHHHHHHHHHHHHhcCCcEEEEECCHHHHH
Confidence 344555666555555 9999999999999999987 4677777 99999999998653 35667777766554
Q ss_pred --CC---CCCeeEEEecc
Q 006662 278 --YP---SRAFDMAHCSR 290 (636)
Q Consensus 278 --f~---~~sFDlV~~s~ 290 (636)
+. .++||.|++..
T Consensus 89 ~~l~~~g~~~~D~Vl~D~ 106 (301)
T 1m6y_A 89 FLLKTLGIEKVDGILMDL 106 (301)
T ss_dssp HHHHHTTCSCEEEEEEEC
T ss_pred HHHHhcCCCCCCEEEEcC
Confidence 11 14677776543
No 482
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=97.59 E-value=1.9e-05 Score=83.25 Aligned_cols=96 Identities=14% Similarity=0.221 Sum_probs=64.2
Q ss_pred CcceEeeecccchhhhhhhcCC--CeEEEEecCCCCCccchHHHHhhcccchhhccccccCCCCCccceeeeccccccCC
Q 006662 476 RYRNLLDMNAYLGGFAAALVDD--PLWVMNTVPVEAKINTLGVIYERGLIGTYQNWCEAMSTYPRTYDLIHADSIFSLYK 553 (636)
Q Consensus 476 ~~r~vlD~~~g~ggfaa~l~~~--~v~~mnv~~~~~~~~~l~~~~eRgli~~~~~~ce~~~~yp~t~Dl~H~~~~fs~~~ 553 (636)
...+|||+|||.|.++.+|++. ++ .++..|. +.++..+.+..-+.... ...+.++|. ||+|.+..++..+.
T Consensus 188 ~~~~vlDvG~G~G~~~~~l~~~~p~~---~~~~~D~-~~~~~~a~~~~~v~~~~--~d~~~~~p~-~D~v~~~~~lh~~~ 260 (352)
T 1fp2_A 188 GLESIVDVGGGTGTTAKIICETFPKL---KCIVFDR-PQVVENLSGSNNLTYVG--GDMFTSIPN-ADAVLLKYILHNWT 260 (352)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTC---EEEEEEC-HHHHTTCCCBTTEEEEE--CCTTTCCCC-CSEEEEESCGGGSC
T ss_pred cCceEEEeCCCccHHHHHHHHHCCCC---eEEEeeC-HHHHhhcccCCCcEEEe--ccccCCCCC-ccEEEeehhhccCC
Confidence 3679999999999999999864 22 2334444 34555443321122111 122345665 99999988887664
Q ss_pred CCcCHHHHHHHHhhcccC---CcEEEEEe
Q 006662 554 DRCEMEDVLLEMDRILRP---EGSVIIRD 579 (636)
Q Consensus 554 ~~c~~~~~l~e~dRiLrP---gG~~i~~d 579 (636)
+. ....+|-++-|+||| ||+++|.|
T Consensus 261 d~-~~~~~l~~~~~~L~p~~~gG~l~i~e 288 (352)
T 1fp2_A 261 DK-DCLRILKKCKEAVTNDGKRGKVTIID 288 (352)
T ss_dssp HH-HHHHHHHHHHHHHSGGGCCCEEEEEE
T ss_pred HH-HHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 32 234899999999999 99999975
No 483
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=97.59 E-value=3.5e-05 Score=84.22 Aligned_cols=100 Identities=7% Similarity=0.096 Sum_probs=63.9
Q ss_pred CCcceEeeecccchhhhhhhcCC-CeEEEEecCCCCCccchHHH-------Hh----hcc-cchhhcc-ccccCC---C-
Q 006662 475 GRYRNLLDMNAYLGGFAAALVDD-PLWVMNTVPVEAKINTLGVI-------YE----RGL-IGTYQNW-CEAMST---Y- 536 (636)
Q Consensus 475 ~~~r~vlD~~~g~ggfaa~l~~~-~v~~mnv~~~~~~~~~l~~~-------~e----Rgl-i~~~~~~-ce~~~~---y- 536 (636)
....+|||+|||+|.+++.|++. +. ..|+.+|.+..++..+ .+ .|+ ++-+.-. +..+.. +
T Consensus 241 ~~g~~VLDLGCGsG~la~~LA~~~g~--~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~~~~~~~~ 318 (433)
T 1u2z_A 241 KKGDTFMDLGSGVGNCVVQAALECGC--ALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFVDNNRVA 318 (433)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCC--SEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCSTTCHHHH
T ss_pred CCCCEEEEeCCCcCHHHHHHHHHCCC--CEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCccccccccc
Confidence 34678999999999999999874 32 1345555555555555 33 253 1211111 123321 2
Q ss_pred --CCccceeeeccccccCCCCcCHHHHHHHHhhcccCCcEEEEEeC
Q 006662 537 --PRTYDLIHADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDD 580 (636)
Q Consensus 537 --p~t~Dl~H~~~~fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~ 580 (636)
+..||+|-++..+ + .-+++..|.|+-|+|||||.+++.+.
T Consensus 319 ~~~~~FDvIvvn~~l--~--~~d~~~~L~el~r~LKpGG~lVi~d~ 360 (433)
T 1u2z_A 319 ELIPQCDVILVNNFL--F--DEDLNKKVEKILQTAKVGCKIISLKS 360 (433)
T ss_dssp HHGGGCSEEEECCTT--C--CHHHHHHHHHHHTTCCTTCEEEESSC
T ss_pred cccCCCCEEEEeCcc--c--cccHHHHHHHHHHhCCCCeEEEEeec
Confidence 3689999875433 1 13567888999999999999999863
No 484
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=97.57 E-value=6e-05 Score=80.92 Aligned_cols=99 Identities=15% Similarity=0.164 Sum_probs=63.5
Q ss_pred cceEeeecccchhhhhhhcC---CCeEEEEecCCCCCccchHHHHhhcc---cchhhccccccCCCCCccceeeeccccc
Q 006662 477 YRNLLDMNAYLGGFAAALVD---DPLWVMNTVPVEAKINTLGVIYERGL---IGTYQNWCEAMSTYPRTYDLIHADSIFS 550 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~---~~v~~mnv~~~~~~~~~l~~~~eRgl---i~~~~~~ce~~~~yp~t~Dl~H~~~~fs 550 (636)
..+|||+|||+|.++-..++ +.|+.+-..+. -.....++.+.|+ |-+++.--+.+ ..|..+|+|=+.-+-+
T Consensus 84 ~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~~--~~~a~~~~~~n~~~~~i~~i~~~~~~~-~lpe~~DvivsE~~~~ 160 (376)
T 4hc4_A 84 GKTVLDVGAGTGILSIFCAQAGARRVYAVEASAI--WQQAREVVRFNGLEDRVHVLPGPVETV-ELPEQVDAIVSEWMGY 160 (376)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTCSEEEEEECSTT--HHHHHHHHHHTTCTTTEEEEESCTTTC-CCSSCEEEEECCCCBT
T ss_pred CCEEEEeCCCccHHHHHHHHhCCCEEEEEeChHH--HHHHHHHHHHcCCCceEEEEeeeeeee-cCCccccEEEeecccc
Confidence 45799999999987654443 34655544331 1123445556677 44444222222 3578899987644434
Q ss_pred cCCCCcCHHHHHHHHhhcccCCcEEEEE
Q 006662 551 LYKDRCEMEDVLLEMDRILRPEGSVIIR 578 (636)
Q Consensus 551 ~~~~~c~~~~~l~e~dRiLrPgG~~i~~ 578 (636)
..-....++.++...||+|+|||.+|-+
T Consensus 161 ~l~~e~~l~~~l~a~~r~Lkp~G~~iP~ 188 (376)
T 4hc4_A 161 GLLHESMLSSVLHARTKWLKEGGLLLPA 188 (376)
T ss_dssp TBTTTCSHHHHHHHHHHHEEEEEEEESC
T ss_pred cccccchhhhHHHHHHhhCCCCceECCc
Confidence 4444457899999999999999998864
No 485
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=97.55 E-value=8.7e-05 Score=77.22 Aligned_cols=142 Identities=16% Similarity=0.164 Sum_probs=79.6
Q ss_pred CcceEeeecccchhhhhhhcCC-CeEEEEecCCCCCccchHHHHhh------cc----cchhh-ccccccCCCCCcccee
Q 006662 476 RYRNLLDMNAYLGGFAAALVDD-PLWVMNTVPVEAKINTLGVIYER------GL----IGTYQ-NWCEAMSTYPRTYDLI 543 (636)
Q Consensus 476 ~~r~vlD~~~g~ggfaa~l~~~-~v~~mnv~~~~~~~~~l~~~~eR------gl----i~~~~-~~ce~~~~yp~t~Dl~ 543 (636)
..++|||+|||.|+++..|++. ++ .+|+-+|..+.++.++.++ |+ +-+++ |-.+.+...+.+||+|
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~~--~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~I 172 (304)
T 2o07_A 95 NPRKVLIIGGGDGGVLREVVKHPSV--ESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVI 172 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTC--CEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEE
T ss_pred CCCEEEEECCCchHHHHHHHHcCCC--CEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEE
Confidence 3579999999999999999987 34 3455556665677777654 22 11221 1111122235889999
Q ss_pred eeccccccCCCC-cCHHHHHHHHhhcccCCcEEEEEe-----CHHHHHHHHHHHhcCCCceEEec--cCCCCCCcceEEE
Q 006662 544 HADSIFSLYKDR-CEMEDVLLEMDRILRPEGSVIIRD-----DVDILVKIKSITDGMEWEGRIAD--HENGPRQREKILF 615 (636)
Q Consensus 544 H~~~~fs~~~~~-c~~~~~l~e~dRiLrPgG~~i~~d-----~~~~~~~~~~~~~~~~W~~~~~~--~e~~~~~~~~~l~ 615 (636)
-++......... -....++-++-|+|||||.+++.. ..+....+.+..+.+-=.+...- .-.-+.+...+++
T Consensus 173 i~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~f~~v~~~~~~vP~~~~g~~g~~~ 252 (304)
T 2o07_A 173 ITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGECQWLHLDLIKEMRQFCQSLFPVVAYAYCTIPTYPSGQIGFML 252 (304)
T ss_dssp EEECC-----------CHHHHHHHHHEEEEEEEEEEEECTTTCHHHHHHHHHHHHHHCSEEEEEEEECTTSGGGEEEEEE
T ss_pred EECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEecCCcccchHHHHHHHHHHHHhCCCceeEEEEeccccCcceEEEE
Confidence 985432211100 012468999999999999999964 12344444444333322232211 0111112346888
Q ss_pred EEec
Q 006662 616 ANKK 619 (636)
Q Consensus 616 ~~K~ 619 (636)
|.|.
T Consensus 253 as~~ 256 (304)
T 2o07_A 253 CSKN 256 (304)
T ss_dssp EESS
T ss_pred EeCC
Confidence 8886
No 486
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=97.54 E-value=0.00012 Score=77.38 Aligned_cols=140 Identities=19% Similarity=0.081 Sum_probs=81.3
Q ss_pred CCcceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhh----cc--cchhhccccccCCCCCccceeeeccc
Q 006662 475 GRYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GL--IGTYQNWCEAMSTYPRTYDLIHADSI 548 (636)
Q Consensus 475 ~~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl--i~~~~~~ce~~~~yp~t~Dl~H~~~~ 548 (636)
.....|||+|||.|+++..++...-=...|+.+|.++.++..+.++ |+ |-+.+.=.+.+......||+|-++--
T Consensus 202 ~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~~~~~~~D~Ii~npP 281 (354)
T 3tma_A 202 RPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLPRFFPEVDRILANPP 281 (354)
T ss_dssp CTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGGGTCCCCSEEEECCC
T ss_pred CCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhCccccCCCCEEEECCC
Confidence 4467999999999999877765210001345556666777777654 43 22222111222222367899999766
Q ss_pred cccCC-CCcC----HHHHHHHHhhcccCCcEEEEEeCHHHHHHHHHHHhcCCCceEEe-ccCCCCCCcceEEEEEe
Q 006662 549 FSLYK-DRCE----MEDVLLEMDRILRPEGSVIIRDDVDILVKIKSITDGMEWEGRIA-DHENGPRQREKILFANK 618 (636)
Q Consensus 549 fs~~~-~~c~----~~~~l~e~dRiLrPgG~~i~~d~~~~~~~~~~~~~~~~W~~~~~-~~e~~~~~~~~~l~~~K 618 (636)
|..-. ..-. ...++-++-|+|||||.+++...... -++++.+ ..|+.... ...+|.+. -.|++++|
T Consensus 282 yg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~~~--~~~~~~~-~g~~~~~~~~l~~g~l~-~~i~vl~r 353 (354)
T 3tma_A 282 HGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTLRPA--LLKRALP-PGFALRHARVVEQGGVY-PRVFVLEK 353 (354)
T ss_dssp SCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEESCHH--HHHHHCC-TTEEEEEEEECCBTTBC-CEEEEEEE
T ss_pred CcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeCCHH--HHHHHhh-cCcEEEEEEEEEeCCEE-EEEEEEEc
Confidence 54211 1111 25788999999999999998654432 2445555 66765422 22344433 45666665
No 487
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=97.54 E-value=7.1e-05 Score=75.89 Aligned_cols=83 Identities=13% Similarity=0.074 Sum_probs=60.4
Q ss_pred HHHHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhcCCE--EEEcCcCCchHHHHHHHHHcCC---CeEEEEeccccCC
Q 006662 203 AYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNIL--AVSFAPRDTHEAQVQFALERGV---PALIGVMASIRLP 277 (636)
Q Consensus 203 ~~id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~~v~--vv~i~p~Dis~a~l~~A~erg~---~~~~~~~d~~~Lp 277 (636)
..++.+.+.+...++. +|||||||+|.++. +.. +.. ++.+ |+++.+++.++++.. ++.+..+|...++
T Consensus 8 ~i~~~iv~~~~~~~~~--~VLEIG~G~G~lt~-l~~-~~~~~v~av---Eid~~~~~~a~~~~~~~~~v~~i~~D~~~~~ 80 (252)
T 1qyr_A 8 FVIDSIVSAINPQKGQ--AMVEIGPGLAALTE-PVG-ERLDQLTVI---ELDRDLAARLQTHPFLGPKLTIYQQDAMTFN 80 (252)
T ss_dssp HHHHHHHHHHCCCTTC--CEEEECCTTTTTHH-HHH-TTCSCEEEE---CCCHHHHHHHHTCTTTGGGEEEECSCGGGCC
T ss_pred HHHHHHHHhcCCCCcC--EEEEECCCCcHHHH-hhh-CCCCeEEEE---ECCHHHHHHHHHHhccCCceEEEECchhhCC
Confidence 3556677777665555 89999999999999 654 444 5666 889999999987642 5788888988877
Q ss_pred CCC-----CCeeEEEecccc
Q 006662 278 YPS-----RAFDMAHCSRCL 292 (636)
Q Consensus 278 f~~-----~sFDlV~~s~~L 292 (636)
+++ +..|.|+++...
T Consensus 81 ~~~~~~~~~~~~~vvsNlPY 100 (252)
T 1qyr_A 81 FGELAEKMGQPLRVFGNLPY 100 (252)
T ss_dssp HHHHHHHHTSCEEEEEECCT
T ss_pred HHHhhcccCCceEEEECCCC
Confidence 643 234677776543
No 488
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=97.53 E-value=3.9e-05 Score=75.05 Aligned_cols=93 Identities=13% Similarity=0.080 Sum_probs=61.2
Q ss_pred cceEeeecccchhhhhhhcCCCe----EEEEecCCCCCccchHHHHhh----cc-------cchhhccccccCCC-----
Q 006662 477 YRNLLDMNAYLGGFAAALVDDPL----WVMNTVPVEAKINTLGVIYER----GL-------IGTYQNWCEAMSTY----- 536 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~~~v----~~mnv~~~~~~~~~l~~~~eR----gl-------i~~~~~~ce~~~~y----- 536 (636)
..+|||+|||.|.+++.|++..- =..+|+.+|.++..+..+.++ |+ +-+.+ .......
T Consensus 81 ~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~--~d~~~~~~~~~~ 158 (227)
T 2pbf_A 81 GSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIH--KNIYQVNEEEKK 158 (227)
T ss_dssp TCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEE--CCGGGCCHHHHH
T ss_pred CCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEE--CChHhcccccCc
Confidence 56999999999999999876410 001445556666677777665 31 22221 1122222
Q ss_pred -CCccceeeeccccccCCCCcCHHHHHHHHhhcccCCcEEEEEeC
Q 006662 537 -PRTYDLIHADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDD 580 (636)
Q Consensus 537 -p~t~Dl~H~~~~fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~ 580 (636)
+..||+|+++..+. .++-++-++|+|||.+++.-.
T Consensus 159 ~~~~fD~I~~~~~~~---------~~~~~~~~~LkpgG~lv~~~~ 194 (227)
T 2pbf_A 159 ELGLFDAIHVGASAS---------ELPEILVDLLAENGKLIIPIE 194 (227)
T ss_dssp HHCCEEEEEECSBBS---------SCCHHHHHHEEEEEEEEEEEE
T ss_pred cCCCcCEEEECCchH---------HHHHHHHHhcCCCcEEEEEEc
Confidence 27899999876654 245788999999999999743
No 489
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=97.53 E-value=5.8e-05 Score=76.96 Aligned_cols=103 Identities=12% Similarity=0.075 Sum_probs=65.2
Q ss_pred HHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhcCCEEEEcCcCCchHHHHH-------HHHHc----C---CCeEEEEec
Q 006662 207 DIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQ-------FALER----G---VPALIGVMA 272 (636)
Q Consensus 207 ~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~~v~vv~i~p~Dis~a~l~-------~A~er----g---~~~~~~~~d 272 (636)
.+.+.+...++...+|||+|||+|..+..++.++..++.+ |.++.+.+ .+.++ + ..+.+..+|
T Consensus 77 ~l~~al~l~~g~~~~VLDl~~G~G~dal~lA~~g~~V~~v---E~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D 153 (258)
T 2oyr_A 77 AVAKAVGIKGDYLPDVVDATAGLGRDAFVLASVGCRVRML---ERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHAS 153 (258)
T ss_dssp HHHHHTTCBTTBCCCEEETTCTTCHHHHHHHHHTCCEEEE---ECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESC
T ss_pred HHHHHhcccCCCCCEEEEcCCcCCHHHHHHHHcCCEEEEE---ECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECC
Confidence 3455555555522489999999999999999987777777 77775433 22211 1 236788777
Q ss_pred ccc-CCCCCCCeeEEEecccccccccChHHHHHHHHhcccCCc
Q 006662 273 SIR-LPYPSRAFDMAHCSRCLIPWGQYDGLYLIEVDRVLRPGG 314 (636)
Q Consensus 273 ~~~-Lpf~~~sFDlV~~s~~L~h~~~d~~~~L~el~RvLKPGG 314 (636)
... ++.....||+|++...+ +.. ....++++..++||+.+
T Consensus 154 ~~~~L~~~~~~fDvV~lDP~y-~~~-~~saavkk~~~~lr~l~ 194 (258)
T 2oyr_A 154 SLTALTDITPRPQVVYLDPMF-PHK-QKSALVKKEMRVFQSLV 194 (258)
T ss_dssp HHHHSTTCSSCCSEEEECCCC-CCC-CC-----HHHHHHHHHS
T ss_pred HHHHHHhCcccCCEEEEcCCC-CCc-ccchHHHHHHHHHHHhh
Confidence 655 34323479999998766 333 22456777788888765
No 490
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=97.53 E-value=7.5e-05 Score=77.90 Aligned_cols=141 Identities=11% Similarity=0.031 Sum_probs=83.3
Q ss_pred cceEeeecccchhhhhhhcCC-CeEEEEecCCCCCccchHHHHhh------c-c----cchhh-ccccccCCCCCcccee
Q 006662 477 YRNLLDMNAYLGGFAAALVDD-PLWVMNTVPVEAKINTLGVIYER------G-L----IGTYQ-NWCEAMSTYPRTYDLI 543 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~~-~v~~mnv~~~~~~~~~l~~~~eR------g-l----i~~~~-~~ce~~~~yp~t~Dl~ 543 (636)
.++|||+|||.|+++.+|++. ++ .+|+-+|..+..+.++.++ | + +-+++ |..+.....+.+||+|
T Consensus 78 ~~~VLdiG~G~G~~~~~l~~~~~~--~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 155 (314)
T 1uir_A 78 PKRVLIVGGGEGATLREVLKHPTV--EKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVV 155 (314)
T ss_dssp CCEEEEEECTTSHHHHHHTTSTTC--CEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEE
T ss_pred CCeEEEEcCCcCHHHHHHHhcCCC--CEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEE
Confidence 579999999999999999887 34 3555566665677777653 1 1 11111 1111111235889999
Q ss_pred eecccccc---CC-CCcCHHHHHHHHhhcccCCcEEEEEe------CHHHHHHHHHHHhcCCCceEEecc--CCCCCCcc
Q 006662 544 HADSIFSL---YK-DRCEMEDVLLEMDRILRPEGSVIIRD------DVDILVKIKSITDGMEWEGRIADH--ENGPRQRE 611 (636)
Q Consensus 544 H~~~~fs~---~~-~~c~~~~~l~e~dRiLrPgG~~i~~d------~~~~~~~~~~~~~~~~W~~~~~~~--e~~~~~~~ 611 (636)
-++..... .. ..-....++-++-|+|+|||.+++.- ..+....+.+.++..--.+..... ... .+..
T Consensus 156 i~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vP~~-~g~~ 234 (314)
T 1uir_A 156 IIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTGMILLTHHRVHPVVHRTVREAFRYVRSYKNHIPGF-FLNF 234 (314)
T ss_dssp EEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEEEECC---CHHHHHHHHHHTTCSEEEEEEEEEGGG-TEEE
T ss_pred EECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEccCccccCHHHHHHHHHHHHHHCCceEEEEEecCCC-CCeE
Confidence 98644322 10 00013688999999999999999862 223455555555555333332211 001 1235
Q ss_pred eEEEEEecC
Q 006662 612 KILFANKKY 620 (636)
Q Consensus 612 ~~l~~~K~~ 620 (636)
.+++|.|.+
T Consensus 235 ~~~~as~~~ 243 (314)
T 1uir_A 235 GFLLASDAF 243 (314)
T ss_dssp EEEEEESSS
T ss_pred EEEEEECCC
Confidence 678898874
No 491
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=97.52 E-value=6.5e-05 Score=79.88 Aligned_cols=97 Identities=15% Similarity=0.183 Sum_probs=64.1
Q ss_pred CCcceEeeecccchhhhhhhcCC--CeEEEEecCCCCCccchHHHHhhcccchhhccccccCCCCCccceeeeccccccC
Q 006662 475 GRYRNLLDMNAYLGGFAAALVDD--PLWVMNTVPVEAKINTLGVIYERGLIGTYQNWCEAMSTYPRTYDLIHADSIFSLY 552 (636)
Q Consensus 475 ~~~r~vlD~~~g~ggfaa~l~~~--~v~~mnv~~~~~~~~~l~~~~eRgli~~~~~~ce~~~~yp~t~Dl~H~~~~fs~~ 552 (636)
....+|||+|||.|.++.+|++. ++- ++-.|.+ .++..+.++.-+.... ...|.++|.. |+|.+..++-.+
T Consensus 200 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~---~~~~D~~-~~~~~a~~~~~v~~~~--~D~~~~~p~~-D~v~~~~vlh~~ 272 (364)
T 3p9c_A 200 EGLGTLVDVGGGVGATVAAIAAHYPTIK---GVNFDLP-HVISEAPQFPGVTHVG--GDMFKEVPSG-DTILMKWILHDW 272 (364)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCE---EEEEECH-HHHTTCCCCTTEEEEE--CCTTTCCCCC-SEEEEESCGGGS
T ss_pred cCCCEEEEeCCCCCHHHHHHHHHCCCCe---EEEecCH-HHHHhhhhcCCeEEEe--CCcCCCCCCC-CEEEehHHhccC
Confidence 45789999999999999999763 332 2223332 3444433332122221 1234467755 999988777655
Q ss_pred CCCcCHHHHHHHHhhcccCCcEEEEEe
Q 006662 553 KDRCEMEDVLLEMDRILRPEGSVIIRD 579 (636)
Q Consensus 553 ~~~c~~~~~l~e~dRiLrPgG~~i~~d 579 (636)
.+. +...+|-++-|+|||||+++|.|
T Consensus 273 ~d~-~~~~~L~~~~~~L~pgG~l~i~e 298 (364)
T 3p9c_A 273 SDQ-HCATLLKNCYDALPAHGKVVLVQ 298 (364)
T ss_dssp CHH-HHHHHHHHHHHHSCTTCEEEEEE
T ss_pred CHH-HHHHHHHHHHHHcCCCCEEEEEE
Confidence 432 44689999999999999999975
No 492
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=97.52 E-value=5.2e-05 Score=81.15 Aligned_cols=122 Identities=20% Similarity=0.231 Sum_probs=78.8
Q ss_pred cceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhh----cc--cchhh-ccccccCCC---CCccceeeec
Q 006662 477 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GL--IGTYQ-NWCEAMSTY---PRTYDLIHAD 546 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl--i~~~~-~~ce~~~~y---p~t~Dl~H~~ 546 (636)
..+|||+|||+|+|+.+|++. ..+|+.+|.++..+..+.+. |+ +-+++ |.-+.+... +.+||+|.++
T Consensus 210 ~~~VLDlg~G~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~d 286 (382)
T 1wxx_A 210 GERALDVFSYAGGFALHLALG---FREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVLD 286 (382)
T ss_dssp EEEEEEETCTTTHHHHHHHHH---EEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCeEEEeeeccCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEEC
Confidence 568999999999999999876 46778888877787777664 44 22222 111111111 4689999886
Q ss_pred ccc-ccCCCC-----cCHHHHHHHHhhcccCCcEEEEEeCH------HHHHHHHHHHhcCCCceEEe
Q 006662 547 SIF-SLYKDR-----CEMEDVLLEMDRILRPEGSVIIRDDV------DILVKIKSITDGMEWEGRIA 601 (636)
Q Consensus 547 ~~f-s~~~~~-----c~~~~~l~e~dRiLrPgG~~i~~d~~------~~~~~~~~~~~~~~W~~~~~ 601 (636)
--. ...+.. -....++.++-|+|+|||.+++.... .....+++.+.....+..+.
T Consensus 287 pP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~i 353 (382)
T 1wxx_A 287 PPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSHHMTEPLFYAMVAEAAQDAHRLLRVV 353 (382)
T ss_dssp CCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEE
Confidence 432 211111 22357899999999999999997432 24455666666666555543
No 493
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=97.52 E-value=4e-05 Score=78.76 Aligned_cols=120 Identities=16% Similarity=0.227 Sum_probs=77.7
Q ss_pred chhhHHHHHHHHHHHHHhhhccCCCCCcceEeeecccchh----hhhhhcCC-CeE--EEEecCCCCCccchHHHHhhc-
Q 006662 450 FREDTALWKKRVTYYKSVDYQLAQPGRYRNLLDMNAYLGG----FAAALVDD-PLW--VMNTVPVEAKINTLGVIYERG- 521 (636)
Q Consensus 450 f~~d~~~w~~~v~~y~~~~~~l~~~~~~r~vlD~~~g~gg----faa~l~~~-~v~--~mnv~~~~~~~~~l~~~~eRg- 521 (636)
|-.|...|..-.+. +++. . +.-+|+|+|||+|- .|..|.+. +-. -..|+.+|.++.+|..+.+.-
T Consensus 86 FfRd~~~f~~l~~~---llp~--~--~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y 158 (274)
T 1af7_A 86 FFREAHHFPILAEH---ARRR--H--GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIY 158 (274)
T ss_dssp TTTTTTHHHHHHHH---HHHS--C--SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEE
T ss_pred ccCChHHHHHHHHH---ccCC--C--CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCC
Confidence 55566666543322 2332 1 23579999999997 55555543 200 027889999989999887531
Q ss_pred -------c-----------------------------cc-hhhccccccCCCC--CccceeeeccccccCCCCcCHHHHH
Q 006662 522 -------L-----------------------------IG-TYQNWCEAMSTYP--RTYDLIHADSIFSLYKDRCEMEDVL 562 (636)
Q Consensus 522 -------l-----------------------------i~-~~~~~ce~~~~yp--~t~Dl~H~~~~fs~~~~~c~~~~~l 562 (636)
+ |- ..||+.+ .+|| ..||+|-|..|+-... .-....++
T Consensus 159 ~~~~~~~~~~~~~~~~f~~~~~~~~~~~~v~~~lr~~V~F~~~dl~~--~~~~~~~~fDlI~crnvliyf~-~~~~~~vl 235 (274)
T 1af7_A 159 RLSELKTLSPQQLQRYFMRGTGPHEGLVRVRQELANYVEFSSVNLLE--KQYNVPGPFDAIFCRNVMIYFD-KTTQEDIL 235 (274)
T ss_dssp EGGGGTTSCHHHHHHHEEECCTTSCSEEEECHHHHTTEEEEECCTTC--SSCCCCCCEEEEEECSSGGGSC-HHHHHHHH
T ss_pred chhhhhcCCHHHHHHHhhccccCCCCceeechhhcccCeEEecccCC--CCCCcCCCeeEEEECCchHhCC-HHHHHHHH
Confidence 0 00 1234444 2344 7899999988875442 23457899
Q ss_pred HHHhhcccCCcEEEEEe
Q 006662 563 LEMDRILRPEGSVIIRD 579 (636)
Q Consensus 563 ~e~dRiLrPgG~~i~~d 579 (636)
-++-+.|+|||++++..
T Consensus 236 ~~~~~~L~pgG~L~lg~ 252 (274)
T 1af7_A 236 RRFVPLLKPDGLLFAGH 252 (274)
T ss_dssp HHHGGGEEEEEEEEECT
T ss_pred HHHHHHhCCCcEEEEEe
Confidence 99999999999999954
No 494
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=97.49 E-value=0.00014 Score=76.40 Aligned_cols=142 Identities=13% Similarity=0.084 Sum_probs=81.2
Q ss_pred cceEeeecccchhhhhhhcC-CCeEEEEecCCCCCccchHHHHhhc-c-----cchhh-ccccccCCCC-Cccceeeecc
Q 006662 477 YRNLLDMNAYLGGFAAALVD-DPLWVMNTVPVEAKINTLGVIYERG-L-----IGTYQ-NWCEAMSTYP-RTYDLIHADS 547 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~-~~v~~mnv~~~~~~~~~l~~~~eRg-l-----i~~~~-~~ce~~~~yp-~t~Dl~H~~~ 547 (636)
..+|||+|||.|+++.+|++ .+-. .|+-+|..+.++.++.++= + +-+++ |-.+-...++ .+||+|-++.
T Consensus 90 ~~rVLdIG~G~G~la~~la~~~p~~--~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~ 167 (317)
T 3gjy_A 90 KLRITHLGGGACTMARYFADVYPQS--RNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRDV 167 (317)
T ss_dssp GCEEEEESCGGGHHHHHHHHHSTTC--EEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEECC
T ss_pred CCEEEEEECCcCHHHHHHHHHCCCc--EEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEECC
Confidence 34999999999999999987 4321 3344455556888777651 1 11222 2222223454 8999998864
Q ss_pred ccccCCC-CcCHHHHHHHHhhcccCCcEEEEEeC--H--HHHHHHHH-HHhcCCCceEEe-ccC--CCCCCcceEEEEEe
Q 006662 548 IFSLYKD-RCEMEDVLLEMDRILRPEGSVIIRDD--V--DILVKIKS-ITDGMEWEGRIA-DHE--NGPRQREKILFANK 618 (636)
Q Consensus 548 ~fs~~~~-~c~~~~~l~e~dRiLrPgG~~i~~d~--~--~~~~~~~~-~~~~~~W~~~~~-~~e--~~~~~~~~~l~~~K 618 (636)
....+.. .-.-..++-++-|+|||||.+++.-. . ..+..+.+ +.+.+. .+.++ +.. .|......|++|.|
T Consensus 168 ~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~~~~~~~~~~~~~~tL~~vF~-~v~~~~~~~~~~g~~~gN~Vl~As~ 246 (317)
T 3gjy_A 168 FAGAITPQNFTTVEFFEHCHRGLAPGGLYVANCGDHSDLRGAKSELAGMMEVFE-HVAVIADPPMLKGRRYGNIILMGSD 246 (317)
T ss_dssp STTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEEECTTCHHHHHHHHHHHHHCS-EEEEEECHHHHTTSSCEEEEEEEES
T ss_pred CCccccchhhhHHHHHHHHHHhcCCCcEEEEEecCCcchHHHHHHHHHHHHHCC-ceEEEEecCCCCCCcCceEEEEEEC
Confidence 3222211 11126899999999999999998521 1 22222222 223332 23332 211 22223467899988
Q ss_pred cCC
Q 006662 619 KYW 621 (636)
Q Consensus 619 ~~w 621 (636)
.-.
T Consensus 247 ~pl 249 (317)
T 3gjy_A 247 TEF 249 (317)
T ss_dssp SCC
T ss_pred CCC
Confidence 654
No 495
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=97.47 E-value=3.9e-05 Score=75.34 Aligned_cols=93 Identities=17% Similarity=0.158 Sum_probs=60.2
Q ss_pred cceEeeecccchhhhhhhcCC-Ce----EEEEecCCCCCccchHHHHhhc---------c--cchhhccccccCCCC--C
Q 006662 477 YRNLLDMNAYLGGFAAALVDD-PL----WVMNTVPVEAKINTLGVIYERG---------L--IGTYQNWCEAMSTYP--R 538 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~~-~v----~~mnv~~~~~~~~~l~~~~eRg---------l--i~~~~~~ce~~~~yp--~ 538 (636)
..+|||+|||.|.+++.|++. +. ..-.|+.+|.++..+..+.++. . +-+.+ ......+| .
T Consensus 85 ~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~--~d~~~~~~~~~ 162 (227)
T 1r18_A 85 GARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVE--GDGRKGYPPNA 162 (227)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEE--SCGGGCCGGGC
T ss_pred CCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEE--CCcccCCCcCC
Confidence 568999999999999998763 10 0013445565556777766542 1 22222 11222344 6
Q ss_pred ccceeeeccccccCCCCcCHHHHHHHHhhcccCCcEEEEEeC
Q 006662 539 TYDLIHADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDD 580 (636)
Q Consensus 539 t~Dl~H~~~~fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~ 580 (636)
.||+|+++..+. .++-++-|+|||||.+++.-.
T Consensus 163 ~fD~I~~~~~~~---------~~~~~~~~~LkpgG~lvi~~~ 195 (227)
T 1r18_A 163 PYNAIHVGAAAP---------DTPTELINQLASGGRLIVPVG 195 (227)
T ss_dssp SEEEEEECSCBS---------SCCHHHHHTEEEEEEEEEEES
T ss_pred CccEEEECCchH---------HHHHHHHHHhcCCCEEEEEEe
Confidence 899999866553 234788999999999999753
No 496
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=97.47 E-value=7.9e-05 Score=76.47 Aligned_cols=114 Identities=14% Similarity=0.035 Sum_probs=64.3
Q ss_pred HHHHHHHHHhhccCCCCCcEEEEeCCCCcHHHHHHhhc-CCEEEEcCcCCchHHHHHHHHH---cCCCeEEEEeccccCC
Q 006662 202 DAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR-NILAVSFAPRDTHEAQVQFALE---RGVPALIGVMASIRLP 277 (636)
Q Consensus 202 ~~~id~L~~lL~l~~g~~r~VLDIGCGtG~~a~~La~~-~v~vv~i~p~Dis~a~l~~A~e---rg~~~~~~~~d~~~Lp 277 (636)
...+.+|.+...+.++. +|||+|||.|.|+.+++++ ++. .+.+.|+...+...+.. .+.++.....+.....
T Consensus 76 AfKL~ei~eK~~Lk~~~--~VLDLGaAPGGWsQvAa~~~gv~--sV~GvdvG~d~~~~pi~~~~~g~~ii~~~~~~dv~~ 151 (282)
T 3gcz_A 76 SAKLRWMEERGYVKPTG--IVVDLGCGRGGWSYYAASLKNVK--KVMAFTLGVQGHEKPIMRTTLGWNLIRFKDKTDVFN 151 (282)
T ss_dssp HHHHHHHHHTTSCCCCE--EEEEETCTTCHHHHHHHTSTTEE--EEEEECCCCTTSCCCCCCCBTTGGGEEEECSCCGGG
T ss_pred HHHHHHHHHhcCCCCCC--EEEEeCCCCCHHHHHHHHhcCCC--eeeeEEeccCccccccccccCCCceEEeeCCcchhh
Confidence 33334444444455544 8999999999999998865 322 11122333221111100 1112222222222234
Q ss_pred CCCCCeeEEEecccccccccCh-------HHHHHHHHhcccCC--cEEEEEeC
Q 006662 278 YPSRAFDMAHCSRCLIPWGQYD-------GLYLIEVDRVLRPG--GYWILSGP 321 (636)
Q Consensus 278 f~~~sFDlV~~s~~L~h~~~d~-------~~~L~el~RvLKPG--G~Liis~p 321 (636)
++.+.+|+|+|-.+.. .... -.+|.-+.++|+|| |.|++-..
T Consensus 152 l~~~~~DvVLSDmApn--sG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF 202 (282)
T 3gcz_A 152 MEVIPGDTLLCDIGES--SPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVL 202 (282)
T ss_dssp SCCCCCSEEEECCCCC--CSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEES
T ss_pred cCCCCcCEEEecCccC--CCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEe
Confidence 5678899999976653 2221 13566678999999 99999865
No 497
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=97.47 E-value=0.00048 Score=70.12 Aligned_cols=130 Identities=13% Similarity=0.027 Sum_probs=77.9
Q ss_pred CcceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhh------cc----cchhhccccccCCCCCccceeee
Q 006662 476 RYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER------GL----IGTYQNWCEAMSTYPRTYDLIHA 545 (636)
Q Consensus 476 ~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR------gl----i~~~~~~ce~~~~yp~t~Dl~H~ 545 (636)
..++|||+|||.|+++.++++.+ ..|+-+|..+.++.++.++ ++ +.+. ++.-..|+.+||+|-+
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~~---~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~---~~D~~~~~~~fD~Ii~ 145 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKYD---THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHA---KQLLDLDIKKYDLIFC 145 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTSS---CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEE---SSGGGSCCCCEEEEEE
T ss_pred CCCEEEEEeCCcCHHHHHHHhCC---CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEE---echHHHHHhhCCEEEE
Confidence 35799999999999999998874 3555556655676666543 11 1111 1111223388999887
Q ss_pred ccccccCCCCcCHHHHHHHHhhcccCCcEEEEEe-----CHHHHHHHHHHHhcCCCceEEeccCCCCC-CcceEEEEEec
Q 006662 546 DSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRD-----DVDILVKIKSITDGMEWEGRIADHENGPR-QREKILFANKK 619 (636)
Q Consensus 546 ~~~fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d-----~~~~~~~~~~~~~~~~W~~~~~~~e~~~~-~~~~~l~~~K~ 619 (636)
+. -+....+-++-|+|+|||.+++.. ..+.+..+.+.++..--.+.. ....-|. +...+++|.|.
T Consensus 146 d~--------~dp~~~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~~~~-~~~~vP~~g~~~~~~as~~ 216 (262)
T 2cmg_A 146 LQ--------EPDIHRIDGLKRMLKEDGVFISVAKHPLLEHVSMQNALKNMGGVFSVAMP-FVAPLRILSNKGYIYASFK 216 (262)
T ss_dssp SS--------CCCHHHHHHHHTTEEEEEEEEEEEECTTTCHHHHHHHHHHHHTTCSEEEE-ECCTTCTTCCEEEEEEESS
T ss_pred CC--------CChHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHhCCceEE-EEEccCCCcccEEEEeeCC
Confidence 51 122347889999999999999962 123344444444443222322 2232232 23457788887
Q ss_pred C
Q 006662 620 Y 620 (636)
Q Consensus 620 ~ 620 (636)
+
T Consensus 217 ~ 217 (262)
T 2cmg_A 217 T 217 (262)
T ss_dssp C
T ss_pred C
Confidence 4
No 498
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=97.45 E-value=9.5e-05 Score=79.80 Aligned_cols=122 Identities=19% Similarity=0.293 Sum_probs=77.5
Q ss_pred cceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhh----cccchh--hccccccCCCCCccceeeeccc-c
Q 006662 477 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GLIGTY--QNWCEAMSTYPRTYDLIHADSI-F 549 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gli~~~--~~~ce~~~~yp~t~Dl~H~~~~-f 549 (636)
..+|||+|||+|+|+.+++..+.- |+.+|.++.++..+.++ |+-..+ .|..+.+..++..||+|.++-- |
T Consensus 215 g~~VLDlg~GtG~~sl~~a~~ga~---V~avDis~~al~~a~~n~~~ng~~~~~~~~D~~~~l~~~~~~fD~Ii~dpP~f 291 (393)
T 4dmg_A 215 GERVLDVYSYVGGFALRAARKGAY---ALAVDKDLEALGVLDQAALRLGLRVDIRHGEALPTLRGLEGPFHHVLLDPPTL 291 (393)
T ss_dssp TCEEEEESCTTTHHHHHHHHTTCE---EEEEESCHHHHHHHHHHHHHHTCCCEEEESCHHHHHHTCCCCEEEEEECCCCC
T ss_pred CCeEEEcccchhHHHHHHHHcCCe---EEEEECCHHHHHHHHHHHHHhCCCCcEEEccHHHHHHHhcCCCCEEEECCCcC
Confidence 568999999999999999887642 66778887788777654 442111 1222222333544999998643 2
Q ss_pred ccCCC-----CcCHHHHHHHHhhcccCCcEEEEEe------CHHHHHHHHHHHhcCCCceEEe
Q 006662 550 SLYKD-----RCEMEDVLLEMDRILRPEGSVIIRD------DVDILVKIKSITDGMEWEGRIA 601 (636)
Q Consensus 550 s~~~~-----~c~~~~~l~e~dRiLrPgG~~i~~d------~~~~~~~~~~~~~~~~W~~~~~ 601 (636)
+..+. ......++.++-|+|+|||++++.. ..+....+++.+.....+..+.
T Consensus 292 ~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~~~~~~f~~~v~~a~~~~g~~~~i~ 354 (393)
T 4dmg_A 292 VKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSYHLRLEDLLEVARRAAADLGRRLRVH 354 (393)
T ss_dssp CSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHHTCCEEEE
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCHHHHHHHHHHHHHHhCCeEEEE
Confidence 21111 1133578899999999999999653 2234556666665555555443
No 499
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=97.44 E-value=5.8e-05 Score=76.93 Aligned_cols=99 Identities=18% Similarity=0.153 Sum_probs=63.0
Q ss_pred cceEeeecccchhhhhhhcC--CCeEEEEecCCCCCccchHHHHhh----cc--cchhh-ccccccCCC----CCcccee
Q 006662 477 YRNLLDMNAYLGGFAAALVD--DPLWVMNTVPVEAKINTLGVIYER----GL--IGTYQ-NWCEAMSTY----PRTYDLI 543 (636)
Q Consensus 477 ~r~vlD~~~g~ggfaa~l~~--~~v~~mnv~~~~~~~~~l~~~~eR----gl--i~~~~-~~ce~~~~y----p~t~Dl~ 543 (636)
..+|||+|||.|+++.+|++ .+- -.|+.+|.+...+..+.++ |+ +-+++ |. +.+... +..||+|
T Consensus 84 g~~VLDlgaG~G~~t~~la~~~~~~--~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~-~~~~~~~~~~~~~fD~V 160 (274)
T 3ajd_A 84 DDFILDMCAAPGGKTTHLAQLMKNK--GTIVAVEISKTRTKALKSNINRMGVLNTIIINADM-RKYKDYLLKNEIFFDKI 160 (274)
T ss_dssp TCEEEETTCTTCHHHHHHHHHTTTC--SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCH-HHHHHHHHHTTCCEEEE
T ss_pred cCEEEEeCCCccHHHHHHHHHcCCC--CEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCCh-HhcchhhhhccccCCEE
Confidence 56899999999999988875 221 1345556666677776655 54 22222 11 112221 4689999
Q ss_pred eeccccccCC---------------CCcCHHHHHHHHhhcccCCcEEEEE
Q 006662 544 HADSIFSLYK---------------DRCEMEDVLLEMDRILRPEGSVIIR 578 (636)
Q Consensus 544 H~~~~fs~~~---------------~~c~~~~~l~e~dRiLrPgG~~i~~ 578 (636)
-++--+|... -.-....+|-++-|+|||||.++++
T Consensus 161 l~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~s 210 (274)
T 3ajd_A 161 LLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYS 210 (274)
T ss_dssp EEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEE
Confidence 8873333210 0023468899999999999999996
No 500
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=97.37 E-value=2.3e-05 Score=78.30 Aligned_cols=101 Identities=12% Similarity=0.018 Sum_probs=55.5
Q ss_pred CcceEeeecccchhhhhhhcCCCeEEEEecCCCCCccchHHHHhh----cc---cchhh-cccc-ccCCCC----Cccce
Q 006662 476 RYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GL---IGTYQ-NWCE-AMSTYP----RTYDL 542 (636)
Q Consensus 476 ~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl---i~~~~-~~ce-~~~~yp----~t~Dl 542 (636)
...+|||+|||.|.++..|+++.- ...|+.+|.++.++..+.++ |+ +-+++ |..+ -+..++ .+||+
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~ 143 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLN-GWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDF 143 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSE
T ss_pred CCCEEEEeCCChhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccE
Confidence 356899999999999988876410 13566777777788877664 44 33333 2111 122344 58999
Q ss_pred eeeccccccCC---C---------CcCHHHHHHHHhhcccCCcEEEE
Q 006662 543 IHADSIFSLYK---D---------RCEMEDVLLEMDRILRPEGSVII 577 (636)
Q Consensus 543 ~H~~~~fs~~~---~---------~c~~~~~l~e~dRiLrPgG~~i~ 577 (636)
|-++--|-... . ......++-++.|+|||||.+.+
T Consensus 144 i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~ 190 (254)
T 2h00_A 144 CMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEF 190 (254)
T ss_dssp EEECCCCC-------------------------CTTTTHHHHTHHHH
T ss_pred EEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEE
Confidence 99874432111 0 01112445566666666665544
Done!