BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006664
(636 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 314 bits (804), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 151/291 (51%), Positives = 200/291 (68%), Gaps = 13/291 (4%)
Query: 6 YPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMIL 65
+ I + Y L E +G G +A V A C P E VA+K ++ E+ + + + +E Q M
Sbjct: 10 WSINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQ 69
Query: 66 VDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDG------FEEVVIATILRE 119
HPN++ + SFV LW+VM +SGGS L I+K G +E IATILRE
Sbjct: 70 CHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILRE 129
Query: 120 VLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGD--RQRMRNTFVGT 177
VL+GL+YLH +G IHRDVK+GNIL+ G++++ DFGVSA L GD R ++R TFVGT
Sbjct: 130 VLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGT 189
Query: 178 PCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGL-- 235
PCWMAPEVMEQ+ GYDFKADIWSFGITA+ELA G AP+ KYPPMKVL++TLQN PP L
Sbjct: 190 PCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLET 249
Query: 236 ---DYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSFFKQARSNEYI 283
D E +K+ KSF++MI+ CL KDP KRP+A +LL+H FF++A++ E++
Sbjct: 250 GVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAKNKEFL 300
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 309 bits (791), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 150/286 (52%), Positives = 196/286 (68%), Gaps = 13/286 (4%)
Query: 6 YPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMIL 65
+ I + Y L E +G G +A V A C P E VA+K ++ E+ + + + +E Q M
Sbjct: 5 WSINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQ 64
Query: 66 VDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDG------FEEVVIATILRE 119
HPN++ + SFV LW+VM +SGGS L I+K G +E IATILRE
Sbjct: 65 CHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILRE 124
Query: 120 VLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGD--RQRMRNTFVGT 177
VL+GL+YLH +G IHRDVK+GNIL+ G++++ DFGVSA L GD R ++R TFVGT
Sbjct: 125 VLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGT 184
Query: 178 PCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGL-- 235
PCWMAPEVMEQ+ GYDFKADIWSFGITA+ELA G AP+ KYPPMKVL++TLQN PP L
Sbjct: 185 PCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLET 244
Query: 236 ---DYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSFFKQAR 278
D E +K+ KSF++MI+ CL KDP KRP+A +LL+H FF++A+
Sbjct: 245 GVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAK 290
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 233 bits (593), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 123/278 (44%), Positives = 174/278 (62%), Gaps = 12/278 (4%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPN 70
E +T E++G+G V + + ++VA+KI+D E ++ +I +E + D P
Sbjct: 27 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 86
Query: 71 VLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHH 130
V K + S++ D LW++M ++ GGS L +L+ P +E IATILRE+LKGLDYLH
Sbjct: 87 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLE---PGPLDETQIATILREILKGLDYLHSE 143
Query: 131 GHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLH 190
IHRD+K+ N+L+ G +KL DFGV+ L D+ Q RNTFVGTP WMAPEV++Q
Sbjct: 144 KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDT---QIKRNTFVGTPFWMAPEVIKQ-S 199
Query: 191 GYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQM 250
YD KADIWS GITA+ELA G P S+ PMKVL + +N PP L + +SK K+
Sbjct: 200 AYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTL----EGNYSKPLKEF 255
Query: 251 IASCLVKDPSKRPSAKKLLKHSF-FKQARSNEYIARTL 287
+ +CL K+PS RP+AK+LLKH F + A+ Y+ +
Sbjct: 256 VEACLNKEPSFRPTAKELLKHKFILRNAKKTSYLTELI 293
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 232 bits (592), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 123/278 (44%), Positives = 174/278 (62%), Gaps = 12/278 (4%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPN 70
E +T E++G+G V + + ++VA+KI+D E ++ +I +E + D P
Sbjct: 7 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 66
Query: 71 VLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHH 130
V K + S++ D LW++M ++ GGS L +L+ P +E IATILRE+LKGLDYLH
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLE---PGPLDETQIATILREILKGLDYLHSE 123
Query: 131 GHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLH 190
IHRD+K+ N+L+ G +KL DFGV+ L D+ Q RNTFVGTP WMAPEV++Q
Sbjct: 124 KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDT---QIKRNTFVGTPFWMAPEVIKQ-S 179
Query: 191 GYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQM 250
YD KADIWS GITA+ELA G P S+ PMKVL + +N PP L + +SK K+
Sbjct: 180 AYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTL----EGNYSKPLKEF 235
Query: 251 IASCLVKDPSKRPSAKKLLKHSF-FKQARSNEYIARTL 287
+ +CL K+PS RP+AK+LLKH F + A+ Y+ +
Sbjct: 236 VEACLNKEPSFRPTAKELLKHKFILRNAKKTSYLTELI 273
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 230 bits (587), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 122/278 (43%), Positives = 173/278 (62%), Gaps = 12/278 (4%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPN 70
E +T E++G+G V + + ++VA+KI+D E ++ +I +E + D P
Sbjct: 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 81
Query: 71 VLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHH 130
V K + S++ D LW++M ++ GGS L +L+ P +E IATILRE+LKGLDYLH
Sbjct: 82 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLE---PGPLDETQIATILREILKGLDYLHSE 138
Query: 131 GHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLH 190
IHRD+K+ N+L+ G +KL DFGV+ L D+ Q RN FVGTP WMAPEV++Q
Sbjct: 139 KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDT---QIKRNXFVGTPFWMAPEVIKQ-S 194
Query: 191 GYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQM 250
YD KADIWS GITA+ELA G P S+ PMKVL + +N PP L + +SK K+
Sbjct: 195 AYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTL----EGNYSKPLKEF 250
Query: 251 IASCLVKDPSKRPSAKKLLKHSF-FKQARSNEYIARTL 287
+ +CL K+PS RP+AK+LLKH F + A+ Y+ +
Sbjct: 251 VEACLNKEPSFRPTAKELLKHKFILRNAKKTSYLTELI 288
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 230 bits (587), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 128/292 (43%), Positives = 176/292 (60%), Gaps = 18/292 (6%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPN 70
E +T + +G+G V++ + E+VA+KI+D E ++ +I +E + D P
Sbjct: 19 ELFTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 78
Query: 71 VLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHH 130
+ + S++ LW++M ++ GGS L +LK P EE IATILRE+LKGLDYLH
Sbjct: 79 ITRYFGSYLKSTKLWIIMEYLGGGSALDLLK---PGPLEETYIATILREILKGLDYLHSE 135
Query: 131 GHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLH 190
IHRD+K+ N+L+ +G +KL DFGV+ L D+ Q RN FVGTP WMAPEV++Q
Sbjct: 136 RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDT---QIKRNXFVGTPFWMAPEVIKQ-S 191
Query: 191 GYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQM 250
YDFKADIWS GITA+ELA G P S PM+VL + +N+PP L+ + SK FK+
Sbjct: 192 AYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSPPTLEGQH----SKPFKEF 247
Query: 251 IASCLVKDPSKRPSAKKLLKHSFFKQARSNEYIARTLLEGLPALGDRIKALK 302
+ +CL KDP RP+AK+LLKH F Y +T L L DR K K
Sbjct: 248 VEACLNKDPRFRPTAKELLKHKFI-----TRYTKKTSF--LTELIDRYKRWK 292
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 230 bits (587), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 122/278 (43%), Positives = 173/278 (62%), Gaps = 12/278 (4%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPN 70
E +T E++G+G V + + ++VA+KI+D E ++ +I +E + D P
Sbjct: 7 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 66
Query: 71 VLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHH 130
V K + S++ D LW++M ++ GGS L +L+ P +E IATILRE+LKGLDYLH
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLE---PGPLDETQIATILREILKGLDYLHSE 123
Query: 131 GHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLH 190
IHRD+K+ N+L+ G +KL DFGV+ L D+ Q RN FVGTP WMAPEV++Q
Sbjct: 124 KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDT---QIKRNXFVGTPFWMAPEVIKQ-S 179
Query: 191 GYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQM 250
YD KADIWS GITA+ELA G P S+ PMKVL + +N PP L + +SK K+
Sbjct: 180 AYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTL----EGNYSKPLKEF 235
Query: 251 IASCLVKDPSKRPSAKKLLKHSF-FKQARSNEYIARTL 287
+ +CL K+PS RP+AK+LLKH F + A+ Y+ +
Sbjct: 236 VEACLNKEPSFRPTAKELLKHKFILRNAKKTSYLTELI 273
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 229 bits (584), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 129/293 (44%), Positives = 178/293 (60%), Gaps = 20/293 (6%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPN 70
E +T E +G+G V + + ++VA+KI+D E ++ +I +E + D
Sbjct: 23 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSY 82
Query: 71 VLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHH 130
V K + S++ LW++M ++ GGS L +L+A F+E IAT+L+E+LKGLDYLH
Sbjct: 83 VTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAG---PFDEFQIATMLKEILKGLDYLHSE 139
Query: 131 GHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLH 190
IHRD+K+ N+L+ +G +KL DFGV+ L D+ Q RNTFVGTP WMAPEV++Q
Sbjct: 140 KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDT---QIKRNTFVGTPFWMAPEVIQQ-S 195
Query: 191 GYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQM 250
YD KADIWS GITA+ELA G P S PM+VL + +N PP L + F+KSFK+
Sbjct: 196 AYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNPPTLVGD----FTKSFKEF 251
Query: 251 IASCLVKDPSKRPSAKKLLKHSFF-KQARSNEYIARTLLEGLPALGDRIKALK 302
I +CL KDPS RP+AK+LLKH F K ++ Y L L DR K K
Sbjct: 252 IDACLNKDPSFRPTAKELLKHKFIVKNSKKTSY--------LTELIDRFKRWK 296
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 202 bits (515), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 107/269 (39%), Positives = 160/269 (59%), Gaps = 10/269 (3%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPN 70
E + + E++G+G SV++A+ +IVA+K + E SDL I +E M D P+
Sbjct: 29 EVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVE---SDLQEIIKEISIMQQCDSPH 85
Query: 71 VLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHH 130
V+K + S+ + +LW+VM + GS I++ E IATIL+ LKGL+YLH
Sbjct: 86 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRN-KTLTEDEIATILQSTLKGLEYLHFM 144
Query: 131 GHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLH 190
IHRD+K+GNIL++ G KL DFGV+ L D + RN +GTP WMAPEV++++
Sbjct: 145 RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAK---RNXVIGTPFWMAPEVIQEI- 200
Query: 191 GYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQM 250
GY+ ADIWS GITA+E+A G P++ PM+ + M N PP + + +S +F
Sbjct: 201 GYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPP--TFRKPELWSDNFTDF 258
Query: 251 IASCLVKDPSKRPSAKKLLKHSFFKQARS 279
+ CLVK P +R +A +LL+H F + A+
Sbjct: 259 VKQCLVKSPEQRATATQLLQHPFVRSAKG 287
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 189 bits (481), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 113/303 (37%), Positives = 164/303 (54%), Gaps = 26/303 (8%)
Query: 13 YTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMI-LVDHPNV 71
+ L E VG G V++ + ++ A+K++D D + I +E + H N+
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEE--EIKQEINMLKKYSHHRNI 83
Query: 72 LKSHCSFVS------DHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLD 125
+ +F+ D LW+VM F GS ++K + +E IA I RE+L+GL
Sbjct: 84 ATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLS 143
Query: 126 YLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEV 185
+LH H IHRD+K N+L+ +KL DFGVSA L + R RNTF+GTP WMAPEV
Sbjct: 144 HLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGR---RNTFIGTPYWMAPEV 200
Query: 186 MEQLHG----YDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDR 241
+ YDFK+D+WS GITA+E+A G P PM+ L + +N P L + +
Sbjct: 201 IACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRL---KSK 257
Query: 242 KFSKSFKQMIASCLVKDPSKRPSAKKLLKHSFFKQARSNEYIARTLLEGLPALGDRIKAL 301
K+SK F+ I SCLVK+ S+RP+ ++L+KH F + + NE R L+ D I
Sbjct: 258 KWSKKFQSFIESCLVKNHSQRPATEQLMKHPFIRD-QPNERQVRIQLK------DHIDRT 310
Query: 302 KKK 304
KKK
Sbjct: 311 KKK 313
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 182 bits (462), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 123/380 (32%), Positives = 176/380 (46%), Gaps = 71/380 (18%)
Query: 13 YTLYEEVGQGVS--ASVHRALCIPFNEIVAVKILDFER-DNSDLSNISREAQTMILVDHP 69
Y L +G+G +V+ A P E V V+ ++ E N ++ + E L +HP
Sbjct: 27 YELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHP 86
Query: 70 NVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHH 129
N++ +F++D+ LWVV FM+ GS ++ + DG E+ IA IL+ VLK LDY+HH
Sbjct: 87 NIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHH 146
Query: 130 HGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTF----VGTPCWMAPEV 185
G++HR VK+ +ILI V G + L + + G RQR+ + F V W++PEV
Sbjct: 147 MGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEV 206
Query: 186 MEQ-LHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGL--------- 235
++Q L GYD K+DI+S GITA ELA+GH PF P ++LL L P L
Sbjct: 207 LQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAE 266
Query: 236 --------------------------------DYERDRKFSKSFKQMIASCLVKDPSKRP 263
+ R FS F + CL ++P RP
Sbjct: 267 ELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARP 326
Query: 264 SAKKLLKHSFFKQARSNEYIARTLLEGLPALGDRIKALKKKEEDMLAQKKMPDGQKEEIS 323
SA LL HSFFKQ I R E LP L + + E S
Sbjct: 327 SASTLLNHSFFKQ------IKRRASEALPELLRPVTPITNFEG----------------S 364
Query: 324 QNEYKRGISGWNFNLEDVKA 343
Q++ GI G NLE+++
Sbjct: 365 QSQDHSGIFGLVTNLEELEV 384
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 182 bits (462), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 123/380 (32%), Positives = 176/380 (46%), Gaps = 71/380 (18%)
Query: 13 YTLYEEVGQGVS--ASVHRALCIPFNEIVAVKILDFER-DNSDLSNISREAQTMILVDHP 69
Y L +G+G +V+ A P E V V+ ++ E N ++ + E L +HP
Sbjct: 11 YELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHP 70
Query: 70 NVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHH 129
N++ +F++D+ LWVV FM+ GS ++ + DG E+ IA IL+ VLK LDY+HH
Sbjct: 71 NIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHH 130
Query: 130 HGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTF----VGTPCWMAPEV 185
G++HR VK+ +ILI V G + L + + G RQR+ + F V W++PEV
Sbjct: 131 MGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEV 190
Query: 186 MEQ-LHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGL--------- 235
++Q L GYD K+DI+S GITA ELA+GH PF P ++LL L P L
Sbjct: 191 LQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAE 250
Query: 236 --------------------------------DYERDRKFSKSFKQMIASCLVKDPSKRP 263
+ R FS F + CL ++P RP
Sbjct: 251 ELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARP 310
Query: 264 SAKKLLKHSFFKQARSNEYIARTLLEGLPALGDRIKALKKKEEDMLAQKKMPDGQKEEIS 323
SA LL HSFFKQ I R E LP L + + E S
Sbjct: 311 SASTLLNHSFFKQ------IKRRASEALPELLRPVTPITNFEG----------------S 348
Query: 324 QNEYKRGISGWNFNLEDVKA 343
Q++ GI G NLE+++
Sbjct: 349 QSQDHSGIFGLVTNLEELEV 368
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 98/266 (36%), Positives = 148/266 (55%), Gaps = 10/266 (3%)
Query: 13 YTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPNVL 72
YT +E++GQG S +V+ A+ + + VA++ ++ ++ I E M +PN++
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK-ELIINEILVMRENKNPNIV 80
Query: 73 KSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGH 132
S++ LWVVM +++GGS ++ D E IA + RE L+ L++LH +
Sbjct: 81 NYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMD---EGQIAAVCRECLQALEFLHSNQV 137
Query: 133 IHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGY 192
IHRD+KS NIL+ + G++KL DFG A + Q R+T VGTP WMAPEV+ + Y
Sbjct: 138 IHRDIKSDNILLGMDGSVKLTDFGFCAQI---TPEQSKRSTMVGTPYWMAPEVVTR-KAY 193
Query: 193 DFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIA 252
K DIWS GI A+E+ G P+ P++ L + N P L + K S F+ +
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPEL--QNPEKLSAIFRDFLN 251
Query: 253 SCLVKDPSKRPSAKKLLKHSFFKQAR 278
CL D KR SAK+LL+H F K A+
Sbjct: 252 RCLDMDVEKRGSAKELLQHQFLKIAK 277
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 171 bits (434), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 97/266 (36%), Positives = 147/266 (55%), Gaps = 10/266 (3%)
Query: 13 YTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPNVL 72
YT +E++GQG S +V+ A+ + + VA++ ++ ++ I E M +PN++
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK-ELIINEILVMRENKNPNIV 80
Query: 73 KSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGH 132
S++ LWVVM +++GGS ++ D E IA + RE L+ L++LH +
Sbjct: 81 NYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMD---EGQIAAVCRECLQALEFLHSNQV 137
Query: 133 IHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGY 192
IHRD+KS NIL+ + G++KL DFG A + Q R+ VGTP WMAPEV+ + Y
Sbjct: 138 IHRDIKSDNILLGMDGSVKLTDFGFCAQI---TPEQSKRSXMVGTPYWMAPEVVTR-KAY 193
Query: 193 DFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIA 252
K DIWS GI A+E+ G P+ P++ L + N P L + K S F+ +
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPEL--QNPEKLSAIFRDFLN 251
Query: 253 SCLVKDPSKRPSAKKLLKHSFFKQAR 278
CL D KR SAK+LL+H F K A+
Sbjct: 252 RCLEMDVEKRGSAKELLQHQFLKIAK 277
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 96/266 (36%), Positives = 148/266 (55%), Gaps = 10/266 (3%)
Query: 13 YTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPNVL 72
YT +E++GQG S +V+ A+ + + VA++ ++ ++ I E M +PN++
Sbjct: 23 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK-ELIINEILVMRENKNPNIV 81
Query: 73 KSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGH 132
S++ LWVVM +++GGS ++ D E IA + RE L+ L++LH +
Sbjct: 82 NYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMD---EGQIAAVCRECLQALEFLHSNQV 138
Query: 133 IHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGY 192
IHR++KS NIL+ + G++KL DFG A + Q R+T VGTP WMAPEV+ + Y
Sbjct: 139 IHRNIKSDNILLGMDGSVKLTDFGFCAQI---TPEQSKRSTMVGTPYWMAPEVVTR-KAY 194
Query: 193 DFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIA 252
K DIWS GI A+E+ G P+ P++ L + N P L + K S F+ +
Sbjct: 195 GPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPEL--QNPEKLSAIFRDFLN 252
Query: 253 SCLVKDPSKRPSAKKLLKHSFFKQAR 278
CL D KR SAK+L++H F K A+
Sbjct: 253 RCLEMDVEKRGSAKELIQHQFLKIAK 278
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 97/266 (36%), Positives = 147/266 (55%), Gaps = 10/266 (3%)
Query: 13 YTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPNVL 72
YT +E++GQG S +V+ A+ + + VA++ ++ ++ I E M +PN++
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK-ELIINEILVMRENKNPNIV 80
Query: 73 KSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGH 132
S++ LWVVM +++GGS ++ D E IA + RE L+ L++LH +
Sbjct: 81 NYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMD---EGQIAAVCRECLQALEFLHSNQV 137
Query: 133 IHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGY 192
IHRD+KS NIL+ + G++KL DFG A + Q R+ VGTP WMAPEV+ + Y
Sbjct: 138 IHRDIKSDNILLGMDGSVKLTDFGFCAQI---TPEQSKRSEMVGTPYWMAPEVVTR-KAY 193
Query: 193 DFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIA 252
K DIWS GI A+E+ G P+ P++ L + N P L + K S F+ +
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPEL--QNPEKLSAIFRDFLN 251
Query: 253 SCLVKDPSKRPSAKKLLKHSFFKQAR 278
CL D KR SAK+LL+H F K A+
Sbjct: 252 RCLDMDVEKRGSAKELLQHQFLKIAK 277
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 96/266 (36%), Positives = 147/266 (55%), Gaps = 10/266 (3%)
Query: 13 YTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPNVL 72
YT +E++GQG S +V+ A+ + + VA++ ++ ++ I E M +PN++
Sbjct: 23 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK-ELIINEILVMRENKNPNIV 81
Query: 73 KSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGH 132
S++ LWVVM +++GGS ++ D E IA + RE L+ L++LH +
Sbjct: 82 NYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMD---EGQIAAVCRECLQALEFLHSNQV 138
Query: 133 IHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGY 192
IHRD+KS NIL+ + G++KL DFG A + Q R+ VGTP WMAPEV+ + Y
Sbjct: 139 IHRDIKSDNILLGMDGSVKLTDFGFCAQI---TPEQSKRSXMVGTPYWMAPEVVTR-KAY 194
Query: 193 DFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIA 252
K DIWS GI A+E+ G P+ P++ L + N P L + K S F+ +
Sbjct: 195 GPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPEL--QNPEKLSAIFRDFLN 252
Query: 253 SCLVKDPSKRPSAKKLLKHSFFKQAR 278
CL D KR SAK+L++H F K A+
Sbjct: 253 RCLEMDVEKRGSAKELIQHQFLKIAK 278
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 97/284 (34%), Positives = 155/284 (54%), Gaps = 11/284 (3%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPN 70
E + + E+G G V++A + A K+++ + +L + E + + DHP
Sbjct: 19 EVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIE-TKSEEELEDYIVEIEILATCDHPY 77
Query: 71 VLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHH 130
++K ++ D LW+++ F GG+ I+ G E I + R++L+ L++LH
Sbjct: 78 IVKLLGAYYHDGKLWIMIEFCPGGAVDAIM-LELDRGLTEPQIQVVCRQMLEALNFLHSK 136
Query: 131 GHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVM--EQ 188
IHRD+K+GN+L+ + G I+L DFGVSA + + R++F+GTP WMAPEV+ E
Sbjct: 137 RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQK---RDSFIGTPYWMAPEVVMCET 193
Query: 189 LHG--YDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKS 246
+ YD+KADIWS GIT +E+A P + PM+VLL ++ PP L K+S
Sbjct: 194 MKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTL--LTPSKWSVE 251
Query: 247 FKQMIASCLVKDPSKRPSAKKLLKHSFFKQARSNEYIARTLLEG 290
F+ + L K+P RPSA +LL+H F SN+ + + E
Sbjct: 252 FRDFLKIALDKNPETRPSAAQLLEHPFVSSITSNKALRELVAEA 295
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 97/284 (34%), Positives = 155/284 (54%), Gaps = 11/284 (3%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPN 70
E + + E+G G V++A + A K+++ + +L + E + + DHP
Sbjct: 11 EVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIE-TKSEEELEDYIVEIEILATCDHPY 69
Query: 71 VLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHH 130
++K ++ D LW+++ F GG+ I+ G E I + R++L+ L++LH
Sbjct: 70 IVKLLGAYYHDGKLWIMIEFCPGGAVDAIM-LELDRGLTEPQIQVVCRQMLEALNFLHSK 128
Query: 131 GHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVM--EQ 188
IHRD+K+GN+L+ + G I+L DFGVSA + + R++F+GTP WMAPEV+ E
Sbjct: 129 RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQK---RDSFIGTPYWMAPEVVMCET 185
Query: 189 LHG--YDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKS 246
+ YD+KADIWS GIT +E+A P + PM+VLL ++ PP L K+S
Sbjct: 186 MKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTL--LTPSKWSVE 243
Query: 247 FKQMIASCLVKDPSKRPSAKKLLKHSFFKQARSNEYIARTLLEG 290
F+ + L K+P RPSA +LL+H F SN+ + + E
Sbjct: 244 FRDFLKIALDKNPETRPSAAQLLEHPFVSSITSNKALRELVAEA 287
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 166 bits (420), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 95/265 (35%), Positives = 143/265 (53%), Gaps = 16/265 (6%)
Query: 18 EVGQGVSASVHRALCIPFNEIVAVKILDF--ERDNSDLSNISREAQTMILVDHPNVLKSH 75
E+G G +V+ A + +E+VA+K + + ++ N +I +E + + + HPN ++
Sbjct: 22 EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYR 81
Query: 76 CSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHR 135
++ +H W+VM + G + L + +EV IA + L+GL YLH H IHR
Sbjct: 82 GCYLREHTAWLVMEYCLGSAS--DLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHR 139
Query: 136 DVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLH--GYD 193
DVK+GNIL+ G +KLGDFG ++ + + N FVGTP WMAPEV+ + YD
Sbjct: 140 DVKAGNILLSEPGLVKLGDFGSASIMAPA-------NXFVGTPYWMAPEVILAMDEGQYD 192
Query: 194 FKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIAS 253
K D+WS GIT +ELA P M L QN P L + +S+ F+ + S
Sbjct: 193 GKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPAL---QSGHWSEYFRNFVDS 249
Query: 254 CLVKDPSKRPSAKKLLKHSFFKQAR 278
CL K P RP+++ LLKH F + R
Sbjct: 250 CLQKIPQDRPTSEVLLKHRFVLRER 274
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 166 bits (419), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 95/265 (35%), Positives = 143/265 (53%), Gaps = 16/265 (6%)
Query: 18 EVGQGVSASVHRALCIPFNEIVAVKILDF--ERDNSDLSNISREAQTMILVDHPNVLKSH 75
E+G G +V+ A + +E+VA+K + + ++ N +I +E + + + HPN ++
Sbjct: 61 EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYR 120
Query: 76 CSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHR 135
++ +H W+VM + G + L + +EV IA + L+GL YLH H IHR
Sbjct: 121 GCYLREHTAWLVMEYCLGSAS--DLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHR 178
Query: 136 DVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLH--GYD 193
DVK+GNIL+ G +KLGDFG ++ + + N FVGTP WMAPEV+ + YD
Sbjct: 179 DVKAGNILLSEPGLVKLGDFGSASIMAPA-------NXFVGTPYWMAPEVILAMDEGQYD 231
Query: 194 FKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIAS 253
K D+WS GIT +ELA P M L QN P L + +S+ F+ + S
Sbjct: 232 GKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPAL---QSGHWSEYFRNFVDS 288
Query: 254 CLVKDPSKRPSAKKLLKHSFFKQAR 278
CL K P RP+++ LLKH F + R
Sbjct: 289 CLQKIPQDRPTSEVLLKHRFVLRER 313
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 166 bits (419), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 95/268 (35%), Positives = 153/268 (57%), Gaps = 13/268 (4%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPN 70
+ + + E+G G V++A + + A K++D + +L + E + DHPN
Sbjct: 37 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVID-TKSEEELEDYMVEIDILASCDHPN 95
Query: 71 VLKSHCSFVSDHNLWVVMPFMSGGSCLHI-LKAAYPDGFEEVVIATILREVLKGLDYLHH 129
++K +F ++NLW+++ F +GG+ + L+ P E I + ++ L L+YLH
Sbjct: 96 IVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERP--LTESQIQVVCKQTLDALNYLHD 153
Query: 130 HGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVM--- 186
+ IHRD+K+GNIL + G IKL DFGVSA ++ QR R++F+GTP WMAPEV+
Sbjct: 154 NKIIHRDLKAGNILFTLDGDIKLADFGVSAK--NTRXIQR-RDSFIGTPYWMAPEVVMCE 210
Query: 187 -EQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSK 245
+ YD+KAD+WS GIT +E+A P + PM+VLL ++ PP L + ++S
Sbjct: 211 TSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTL--AQPSRWSS 268
Query: 246 SFKQMIASCLVKDPSKRPSAKKLLKHSF 273
+FK + CL K+ R + +LL+H F
Sbjct: 269 NFKDFLKKCLEKNVDARWTTSQLLQHPF 296
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 166 bits (419), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 95/268 (35%), Positives = 153/268 (57%), Gaps = 13/268 (4%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPN 70
+ + + E+G G V++A + + A K++D + +L + E + DHPN
Sbjct: 37 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVID-TKSEEELEDYMVEIDILASCDHPN 95
Query: 71 VLKSHCSFVSDHNLWVVMPFMSGGSCLHI-LKAAYPDGFEEVVIATILREVLKGLDYLHH 129
++K +F ++NLW+++ F +GG+ + L+ P E I + ++ L L+YLH
Sbjct: 96 IVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERP--LTESQIQVVCKQTLDALNYLHD 153
Query: 130 HGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVM--- 186
+ IHRD+K+GNIL + G IKL DFGVSA ++ QR R++F+GTP WMAPEV+
Sbjct: 154 NKIIHRDLKAGNILFTLDGDIKLADFGVSAK--NTRTIQR-RDSFIGTPYWMAPEVVMCE 210
Query: 187 -EQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSK 245
+ YD+KAD+WS GIT +E+A P + PM+VLL ++ PP L + ++S
Sbjct: 211 TSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTL--AQPSRWSS 268
Query: 246 SFKQMIASCLVKDPSKRPSAKKLLKHSF 273
+FK + CL K+ R + +LL+H F
Sbjct: 269 NFKDFLKKCLEKNVDARWTTSQLLQHPF 296
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 165 bits (418), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 95/268 (35%), Positives = 152/268 (56%), Gaps = 13/268 (4%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPN 70
+ + + E+G G V++A + + A K++D + +L + E + DHPN
Sbjct: 37 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVID-TKSEEELEDYMVEIDILASCDHPN 95
Query: 71 VLKSHCSFVSDHNLWVVMPFMSGGSCLHI-LKAAYPDGFEEVVIATILREVLKGLDYLHH 129
++K +F ++NLW+++ F +GG+ + L+ P E I + ++ L L+YLH
Sbjct: 96 IVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERP--LTESQIQVVCKQTLDALNYLHD 153
Query: 130 HGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVM--- 186
+ IHRD+K+GNIL + G IKL DFGVSA ++ QR R+ F+GTP WMAPEV+
Sbjct: 154 NKIIHRDLKAGNILFTLDGDIKLADFGVSAK--NTRXIQR-RDXFIGTPYWMAPEVVMCE 210
Query: 187 -EQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSK 245
+ YD+KAD+WS GIT +E+A P + PM+VLL ++ PP L + ++S
Sbjct: 211 TSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTL--AQPSRWSS 268
Query: 246 SFKQMIASCLVKDPSKRPSAKKLLKHSF 273
+FK + CL K+ R + +LL+H F
Sbjct: 269 NFKDFLKKCLEKNVDARWTTSQLLQHPF 296
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 93/265 (35%), Positives = 151/265 (56%), Gaps = 13/265 (4%)
Query: 15 LYEEVGQ-GVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPNVLK 73
+E +G+ G V++A + + A K++D + +L + E + DHPN++K
Sbjct: 13 FWEIIGELGDFGKVYKAQNKETSVLAAAKVID-TKSEEELEDYMVEIDILASCDHPNIVK 71
Query: 74 SHCSFVSDHNLWVVMPFMSGGSCLHI-LKAAYPDGFEEVVIATILREVLKGLDYLHHHGH 132
+F ++NLW+++ F +GG+ + L+ P E I + ++ L L+YLH +
Sbjct: 72 LLDAFYYENNLWILIEFCAGGAVDAVMLELERP--LTESQIQVVCKQTLDALNYLHDNKI 129
Query: 133 IHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVM----EQ 188
IHRD+K+GNIL + G IKL DFGVSA ++ + R++F+GTP WMAPEV+ +
Sbjct: 130 IHRDLKAGNILFTLDGDIKLADFGVSAK--NTRTXIQRRDSFIGTPYWMAPEVVMCETSK 187
Query: 189 LHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFK 248
YD+KAD+WS GIT +E+A P + PM+VLL ++ PP L + ++S +FK
Sbjct: 188 DRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTL--AQPSRWSSNFK 245
Query: 249 QMIASCLVKDPSKRPSAKKLLKHSF 273
+ CL K+ R + +LL+H F
Sbjct: 246 DFLKKCLEKNVDARWTTSQLLQHPF 270
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 95/262 (36%), Positives = 136/262 (51%), Gaps = 10/262 (3%)
Query: 16 YEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPNVLKSH 75
+ ++G+G + V A ++VAVK +D R + E M H NV++ +
Sbjct: 156 FIKIGEGSTGIVCIATVRSSGKLVAVKKMDL-RKQQRRELLFNEVVIMRDYQHENVVEMY 214
Query: 76 CSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHR 135
S++ LWVVM F+ GG+ I+ E IA + VL+ L LH G IHR
Sbjct: 215 NSYLVGDELWVVMEFLEGGALTDIVTHTR---MNEEQIAAVCLAVLQALSVLHAQGVIHR 271
Query: 136 DVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFK 195
D+KS +IL+ G +KL DFG A + R R VGTP WMAPE++ +L Y +
Sbjct: 272 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR---RKXLVGTPYWMAPELISRL-PYGPE 327
Query: 196 ADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCL 255
DIWS GI +E+ G P+ PP+K + M N PP L + K S S K + L
Sbjct: 328 VDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRL--KNLHKVSPSLKGFLDRLL 385
Query: 256 VKDPSKRPSAKKLLKHSFFKQA 277
V+DP++R +A +LLKH F +A
Sbjct: 386 VRDPAQRATAAELLKHPFLAKA 407
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 95/262 (36%), Positives = 136/262 (51%), Gaps = 10/262 (3%)
Query: 16 YEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPNVLKSH 75
+ ++G+G + V A ++VAVK +D R + E M H NV++ +
Sbjct: 36 FIKIGEGSTGIVCIATVRSSGKLVAVKKMDL-RKQQRRELLFNEVVIMRDYQHENVVEMY 94
Query: 76 CSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHR 135
S++ LWVVM F+ GG+ I+ E IA + VL+ L LH G IHR
Sbjct: 95 NSYLVGDELWVVMEFLEGGALTDIVTHTR---MNEEQIAAVCLAVLQALSVLHAQGVIHR 151
Query: 136 DVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFK 195
D+KS +IL+ G +KL DFG A + R R VGTP WMAPE++ +L Y +
Sbjct: 152 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR---RKXLVGTPYWMAPELISRL-PYGPE 207
Query: 196 ADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCL 255
DIWS GI +E+ G P+ PP+K + M N PP L + K S S K + L
Sbjct: 208 VDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRL--KNLHKVSPSLKGFLDRLL 265
Query: 256 VKDPSKRPSAKKLLKHSFFKQA 277
V+DP++R +A +LLKH F +A
Sbjct: 266 VRDPAQRATAAELLKHPFLAKA 287
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 95/262 (36%), Positives = 136/262 (51%), Gaps = 10/262 (3%)
Query: 16 YEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPNVLKSH 75
+ ++G+G + V A ++VAVK +D R + E M H NV++ +
Sbjct: 79 FIKIGEGSTGIVCIATVRSSGKLVAVKKMDL-RKQQRRELLFNEVVIMRDYQHENVVEMY 137
Query: 76 CSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHR 135
S++ LWVVM F+ GG+ I+ E IA + VL+ L LH G IHR
Sbjct: 138 NSYLVGDELWVVMEFLEGGALTDIVTHTR---MNEEQIAAVCLAVLQALSVLHAQGVIHR 194
Query: 136 DVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFK 195
D+KS +IL+ G +KL DFG A + R R VGTP WMAPE++ +L Y +
Sbjct: 195 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR---RKXLVGTPYWMAPELISRLP-YGPE 250
Query: 196 ADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCL 255
DIWS GI +E+ G P+ PP+K + M N PP L + K S S K + L
Sbjct: 251 VDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRL--KNLHKVSPSLKGFLDRLL 308
Query: 256 VKDPSKRPSAKKLLKHSFFKQA 277
V+DP++R +A +LLKH F +A
Sbjct: 309 VRDPAQRATAAELLKHPFLAKA 330
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 95/262 (36%), Positives = 136/262 (51%), Gaps = 10/262 (3%)
Query: 16 YEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPNVLKSH 75
+ ++G+G + V A ++VAVK +D R + E M H NV++ +
Sbjct: 34 FIKIGEGSTGIVCIATVRSSGKLVAVKKMDL-RKQQRRELLFNEVVIMRDYQHENVVEMY 92
Query: 76 CSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHR 135
S++ LWVVM F+ GG+ I+ E IA + VL+ L LH G IHR
Sbjct: 93 NSYLVGDELWVVMEFLEGGALTDIVTHTR---MNEEQIAAVCLAVLQALSVLHAQGVIHR 149
Query: 136 DVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFK 195
D+KS +IL+ G +KL DFG A + R R VGTP WMAPE++ +L Y +
Sbjct: 150 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR---RKXLVGTPYWMAPELISRL-PYGPE 205
Query: 196 ADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCL 255
DIWS GI +E+ G P+ PP+K + M N PP L + K S S K + L
Sbjct: 206 VDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRL--KNLHKVSPSLKGFLDRLL 263
Query: 256 VKDPSKRPSAKKLLKHSFFKQA 277
V+DP++R +A +LLKH F +A
Sbjct: 264 VRDPAQRATAAELLKHPFLAKA 285
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 152 bits (384), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 95/262 (36%), Positives = 136/262 (51%), Gaps = 10/262 (3%)
Query: 16 YEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPNVLKSH 75
+ ++G+G + V A ++VAVK +D R + E M H NV++ +
Sbjct: 25 FIKIGEGSTGIVCIATVRSSGKLVAVKKMDL-RKQQRRELLFNEVVIMRDYQHENVVEMY 83
Query: 76 CSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHR 135
S++ LWVVM F+ GG+ I+ E IA + VL+ L LH G IHR
Sbjct: 84 NSYLVGDELWVVMEFLEGGALTDIVTHTR---MNEEQIAAVCLAVLQALSVLHAQGVIHR 140
Query: 136 DVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFK 195
D+KS +IL+ G +KL DFG A + R R VGTP WMAPE++ +L Y +
Sbjct: 141 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR---RKXLVGTPYWMAPELISRL-PYGPE 196
Query: 196 ADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCL 255
DIWS GI +E+ G P+ PP+K + M N PP L + K S S K + L
Sbjct: 197 VDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRL--KNLHKVSPSLKGFLDRLL 254
Query: 256 VKDPSKRPSAKKLLKHSFFKQA 277
V+DP++R +A +LLKH F +A
Sbjct: 255 VRDPAQRATAAELLKHPFLAKA 276
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 152 bits (383), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 95/262 (36%), Positives = 136/262 (51%), Gaps = 10/262 (3%)
Query: 16 YEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPNVLKSH 75
+ ++G+G + V A ++VAVK +D R + E M H NV++ +
Sbjct: 29 FIKIGEGSTGIVCIATVRSSGKLVAVKKMDL-RKQQRRELLFNEVVIMRDYQHENVVEMY 87
Query: 76 CSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHR 135
S++ LWVVM F+ GG+ I+ E IA + VL+ L LH G IHR
Sbjct: 88 NSYLVGDELWVVMEFLEGGALTDIVTHTR---MNEEQIAAVCLAVLQALSVLHAQGVIHR 144
Query: 136 DVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFK 195
D+KS +IL+ G +KL DFG A + R R VGTP WMAPE++ +L Y +
Sbjct: 145 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR---RKXLVGTPYWMAPELISRL-PYGPE 200
Query: 196 ADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCL 255
DIWS GI +E+ G P+ PP+K + M N PP L + K S S K + L
Sbjct: 201 VDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRL--KNLHKVSPSLKGFLDRLL 258
Query: 256 VKDPSKRPSAKKLLKHSFFKQA 277
V+DP++R +A +LLKH F +A
Sbjct: 259 VRDPAQRATAAELLKHPFLAKA 280
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 145 bits (365), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 95/274 (34%), Positives = 144/274 (52%), Gaps = 20/274 (7%)
Query: 18 EVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPNVLKSHCS 77
E+G G V + P ++A K++ E + + I RE Q + + P ++ + +
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 72
Query: 78 FVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHH-HGHIHRD 136
F SD + + M M GGS +LK A E ++ + V+KGL YL H +HRD
Sbjct: 73 FYSDGEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLREKHKIMHRD 130
Query: 137 VKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFKA 196
VK NIL++ RG IKL DFGVS L DS M N+FVGT +M+PE ++ H Y ++
Sbjct: 131 VKPSNILVNSRGEIKLCDFGVSGQLIDS-----MANSFVGTRSYMSPERLQGTH-YSVQS 184
Query: 197 DIWSFGITALELAHGHAPF-------SKYPPMKV--LLMTLQNAPPGLDYERDRKFSKSF 247
DIWS G++ +E+A G P PPM + LL + N PP FS F
Sbjct: 185 DIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYIVNEPP--PKLPSGVFSLEF 242
Query: 248 KQMIASCLVKDPSKRPSAKKLLKHSFFKQARSNE 281
+ + CL+K+P++R K+L+ H+F K++ + E
Sbjct: 243 QDFVNKCLIKNPAERADLKQLMVHAFIKRSDAEE 276
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/267 (35%), Positives = 142/267 (53%), Gaps = 16/267 (5%)
Query: 18 EVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPNVLKSHCS 77
E+G G V + P ++A K++ E + + I RE Q + + P ++ + +
Sbjct: 16 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 75
Query: 78 FVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHH-HGHIHRD 136
F SD + + M M GGS +LK A E ++ + V+KGL YL H +HRD
Sbjct: 76 FYSDGEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLREKHKIMHRD 133
Query: 137 VKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFKA 196
VK NIL++ RG IKL DFGVS L D M N FVGT +M+PE ++ H Y ++
Sbjct: 134 VKPSNILVNSRGEIKLCDFGVSGQLID-----EMANEFVGTRSYMSPERLQGTH-YSVQS 187
Query: 197 DIWSFGITALELAHGHAPFSKYPPMKV--LLMTLQNAPPGLDYERDRKFSKSFKQMIASC 254
DIWS G++ +E+A G P PPM + LL + N PP FS F+ + C
Sbjct: 188 DIWSMGLSLVEMAVGRYP---RPPMAIFELLDYIVNEPP--PKLPSAVFSLEFQDFVNKC 242
Query: 255 LVKDPSKRPSAKKLLKHSFFKQARSNE 281
L+K+P++R K+L+ H+F K++ + E
Sbjct: 243 LIKNPAERADLKQLMVHAFIKRSDAEE 269
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 93/267 (34%), Positives = 137/267 (51%), Gaps = 10/267 (3%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPN 70
E+ + ++G+G + V A + VAVK +D R + E M H N
Sbjct: 45 EYLANFIKIGEGSTGIVCIATEKHTGKQVAVKKMDL-RKQQRRELLFNEVVIMRDYHHDN 103
Query: 71 VLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHH 130
V+ + S++ LWVVM F+ GG+ I+ E IAT+ VL+ L YLH+
Sbjct: 104 VVDMYSSYLVGDELWVVMEFLEGGALTDIVTHTR---MNEEQIATVCLSVLRALSYLHNQ 160
Query: 131 GHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLH 190
G IHRD+KS +IL+ G IKL DFG A + + R VGTP WMAPEV+ +L
Sbjct: 161 GVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPK---RKXLVGTPYWMAPEVISRL- 216
Query: 191 GYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQM 250
Y + DIWS GI +E+ G P+ PP++ + + PP + + K S +
Sbjct: 217 PYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDSLPPRV--KDLHKVSSVLRGF 274
Query: 251 IASCLVKDPSKRPSAKKLLKHSFFKQA 277
+ LV++PS+R +A++LL H F K A
Sbjct: 275 LDLMLVREPSQRATAQELLGHPFLKLA 301
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 91/262 (34%), Positives = 134/262 (51%), Gaps = 10/262 (3%)
Query: 16 YEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPNVLKSH 75
Y ++G+G + V A VAVK++D R + E M H NV++ +
Sbjct: 50 YVKIGEGSTGIVCLAREKHSGRQVAVKMMDL-RKQQRRELLFNEVVIMRDYQHFNVVEMY 108
Query: 76 CSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHR 135
S++ LWV+M F+ GG+ I+ E IAT+ VL+ L YLH G IHR
Sbjct: 109 KSYLVGEELWVLMEFLQGGALTDIVSQVR---LNEEQIATVCEAVLQALAYLHAQGVIHR 165
Query: 136 DVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFK 195
D+KS +IL+ + G +KL DFG A + S D + R VGTP WMAPEV+ + Y +
Sbjct: 166 DIKSDSILLTLDGRVKLSDFGFCAQI--SKDVPK-RKXLVGTPYWMAPEVISR-SLYATE 221
Query: 196 ADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCL 255
DIWS GI +E+ G P+ P++ + + PP L + K S + + L
Sbjct: 222 VDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKL--KNSHKVSPVLRDFLERML 279
Query: 256 VKDPSKRPSAKKLLKHSFFKQA 277
V+DP +R +A++LL H F Q
Sbjct: 280 VRDPQERATAQELLDHPFLLQT 301
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 95/273 (34%), Positives = 145/273 (53%), Gaps = 24/273 (8%)
Query: 18 EVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPNVLKSHCS 77
E+G G V + P ++A K++ E + + I RE Q + + P ++ + +
Sbjct: 32 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 91
Query: 78 FVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHH-HGHIHRD 136
F SD + + M M GGS +LK A E ++ + V+KGL YL H +HRD
Sbjct: 92 FYSDGEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLREKHKIMHRD 149
Query: 137 VKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFKA 196
VK NIL++ RG IKL DFGVS L DS M N+FVGT +M+PE ++ H Y ++
Sbjct: 150 VKPSNILVNSRGEIKLCDFGVSGQLIDS-----MANSFVGTRSYMSPERLQGTH-YSVQS 203
Query: 197 DIWSFGITALELAHGHAPF-SKYPPMKV--LLMTLQNAPP-----GLDYERDRKFSKSFK 248
DIWS G++ +E+A G P S M + LL + N PP G+ FS F+
Sbjct: 204 DIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEPPPKLPSGV-------FSLEFQ 256
Query: 249 QMIASCLVKDPSKRPSAKKLLKHSFFKQARSNE 281
+ CL+K+P++R K+L+ H+F K++ + E
Sbjct: 257 DFVNKCLIKNPAERADLKQLMVHAFIKRSDAEE 289
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 97/306 (31%), Positives = 146/306 (47%), Gaps = 52/306 (16%)
Query: 18 EVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPNVLKSHCS 77
E+G G V + P ++A K++ E + + I RE Q + + P ++ + +
Sbjct: 75 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 134
Query: 78 FVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHH-HGHIHRD 136
F SD + + M M GGS +LK A E ++ + V+KGL YL H +HRD
Sbjct: 135 FYSDGEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLREKHKIMHRD 192
Query: 137 VKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFKA 196
VK NIL++ RG IKL DFGVS L DS M N+FVGT +M+PE ++ H Y ++
Sbjct: 193 VKPSNILVNSRGEIKLCDFGVSGQLIDS-----MANSFVGTRSYMSPERLQGTH-YSVQS 246
Query: 197 DIWSFGITALELAHGHAP----------------------------------FSKY---- 218
DIWS G++ +E+A G P S Y
Sbjct: 247 DIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDS 306
Query: 219 -PPMKV--LLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSFFK 275
PPM + LL + N PP FS F+ + CL+K+P++R K+L+ H+F K
Sbjct: 307 RPPMAIFELLDYIVNEPP--PKLPSAVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIK 364
Query: 276 QARSNE 281
++ + E
Sbjct: 365 RSDAEE 370
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 135 bits (339), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 96/290 (33%), Positives = 149/290 (51%), Gaps = 20/290 (6%)
Query: 18 EVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILV-DHPNVLKSHC 76
E+G+G SV++ + P +I+AVK + D + + + ++ D P +++ +
Sbjct: 29 EIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYG 88
Query: 77 SFVSDHNLWVVMPFMSGGSCLHILKAAYP---DGFEEVVIATILREVLKGLDYLHHHGHI 133
+ + + W+ M MS S K Y D E ++ I +K L++L + I
Sbjct: 89 ALFREGDCWICMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKI 147
Query: 134 -HRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVME---QL 189
HRD+K NIL+D G IKL DFG+S L DS + R G +MAPE ++
Sbjct: 148 IHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRD----AGCRPYMAPERIDPSASR 203
Query: 190 HGYDFKADIWSFGITALELAHGHAPFSKYPPM-KVLLMTLQNAPPGLDYERDRKFSKSFK 248
GYD ++D+WS GIT ELA G P+ K+ + L ++ PP L +R+FS SF
Sbjct: 204 QGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFI 263
Query: 249 QMIASCLVKDPSKRPSAKKLLKHSFF--KQARSNE---YIARTLLEGLPA 293
+ CL KD SKRP K+LLKH F + R+ E Y+ + +L+ +PA
Sbjct: 264 NFVNLCLTKDESKRPKYKELLKHPFILMYEERAVEVACYVCK-ILDQMPA 312
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/279 (34%), Positives = 139/279 (49%), Gaps = 31/279 (11%)
Query: 18 EVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPNVLKSH-- 75
E+G G V + ++AVK + + ++E IL+D VLKSH
Sbjct: 32 EMGSGTCGQVWKMRFRKTGHVIAVKQMR--------RSGNKEENKRILMDLDVVLKSHDC 83
Query: 76 -----C--SFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLH 128
C +F+++ ++++ M M G+C LK E ++ + ++K L YL
Sbjct: 84 PYIVQCFGTFITNTDVFIAMELM--GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLK 141
Query: 129 H-HGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVME 187
HG IHRDVK NIL+D RG IKL DFG+S L D D+ + R+ G +MAPE ++
Sbjct: 142 EKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVD--DKAKDRS--AGCAAYMAPERID 197
Query: 188 ----QLHGYDFKADIWSFGITALELAHGHAPFSKYPP-MKVLLMTLQNAPPGLDYERDRK 242
YD +AD+WS GI+ +ELA G P+ +VL LQ PP L
Sbjct: 198 PPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMG-- 255
Query: 243 FSKSFKQMIASCLVKDPSKRPSAKKLLKHSFFKQARSNE 281
FS F+ + CL KD KRP KLL+HSF K+ + E
Sbjct: 256 FSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKRYETLE 294
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 149/311 (47%), Gaps = 62/311 (19%)
Query: 18 EVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPNVLKSHCS 77
E+G G V + P ++A K++ E + + I RE Q + + P ++ + +
Sbjct: 40 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 99
Query: 78 FVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHH-HGHIHRD 136
F SD + + M M GGS +LK A E ++ + V+KGL YL H +HRD
Sbjct: 100 FYSDGEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLREKHKIMHRD 157
Query: 137 VKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFKA 196
VK NIL++ RG IKL DFGVS L DS M N+FVGT +M+PE ++ H Y ++
Sbjct: 158 VKPSNILVNSRGEIKLCDFGVSGQLIDS-----MANSFVGTRSYMSPERLQGTH-YSVQS 211
Query: 197 DIWSFGITALELAHGHAP----------------------------------FSKY---- 218
DIWS G++ +E+A G P +K+
Sbjct: 212 DIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDS 271
Query: 219 -PPMKV--LLMTLQNAPP-----GLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLK 270
PPM + LL + N PP G+ FS F+ + CL+K+P++R K+L+
Sbjct: 272 RPPMAIFELLDYIVNEPPPKLPSGV-------FSLEFQDFVNKCLIKNPAERADLKQLMV 324
Query: 271 HSFFKQARSNE 281
H+F K++ + E
Sbjct: 325 HAFIKRSDAEE 335
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/306 (31%), Positives = 146/306 (47%), Gaps = 52/306 (16%)
Query: 18 EVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPNVLKSHCS 77
E+G G V + P ++A K++ E + + I RE Q + + P ++ + +
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 72
Query: 78 FVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHH-HGHIHRD 136
F SD + + M M GGS +LK A E ++ + V+KGL YL H +HRD
Sbjct: 73 FYSDGEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLREKHKIMHRD 130
Query: 137 VKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFKA 196
VK NIL++ RG IKL DFGVS L DS M N+FVGT +M+PE ++ H Y ++
Sbjct: 131 VKPSNILVNSRGEIKLCDFGVSGQLIDS-----MANSFVGTRSYMSPERLQGTH-YSVQS 184
Query: 197 DIWSFGITALELAHGHAP----------------------------------FSKY---- 218
DIWS G++ +E+A G P S Y
Sbjct: 185 DIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDS 244
Query: 219 -PPMKV--LLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSFFK 275
PPM + LL + N PP FS F+ + CL+K+P++R K+L+ H+F K
Sbjct: 245 RPPMAIFELLDYIVNEPP--PKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIK 302
Query: 276 QARSNE 281
++ + E
Sbjct: 303 RSDAEE 308
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/306 (31%), Positives = 146/306 (47%), Gaps = 52/306 (16%)
Query: 18 EVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPNVLKSHCS 77
E+G G V + P ++A K++ E + + I RE Q + + P ++ + +
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 72
Query: 78 FVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHH-HGHIHRD 136
F SD + + M M GGS +LK A E ++ + V+KGL YL H +HRD
Sbjct: 73 FYSDGEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLREKHKIMHRD 130
Query: 137 VKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFKA 196
VK NIL++ RG IKL DFGVS L DS M N+FVGT +M+PE ++ H Y ++
Sbjct: 131 VKPSNILVNSRGEIKLCDFGVSGQLIDS-----MANSFVGTRSYMSPERLQGTH-YSVQS 184
Query: 197 DIWSFGITALELAHGHAP----------------------------------FSKY---- 218
DIWS G++ +E+A G P S Y
Sbjct: 185 DIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDS 244
Query: 219 -PPMKV--LLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSFFK 275
PPM + LL + N PP FS F+ + CL+K+P++R K+L+ H+F K
Sbjct: 245 RPPMAIFELLDYIVNEPP--PKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIK 302
Query: 276 QARSNE 281
++ + E
Sbjct: 303 RSDAEE 308
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/306 (31%), Positives = 146/306 (47%), Gaps = 52/306 (16%)
Query: 18 EVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPNVLKSHCS 77
E+G G V + P ++A K++ E + + I RE Q + + P ++ + +
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 72
Query: 78 FVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHH-HGHIHRD 136
F SD + + M M GGS +LK A E ++ + V+KGL YL H +HRD
Sbjct: 73 FYSDGEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLREKHKIMHRD 130
Query: 137 VKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFKA 196
VK NIL++ RG IKL DFGVS L DS M N+FVGT +M+PE ++ H Y ++
Sbjct: 131 VKPSNILVNSRGEIKLCDFGVSGQLIDS-----MANSFVGTRSYMSPERLQGTH-YSVQS 184
Query: 197 DIWSFGITALELAHGHAP----------------------------------FSKY---- 218
DIWS G++ +E+A G P S Y
Sbjct: 185 DIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDS 244
Query: 219 -PPMKV--LLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSFFK 275
PPM + LL + N PP FS F+ + CL+K+P++R K+L+ H+F K
Sbjct: 245 RPPMAIFELLDYIVNEPP--PKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIK 302
Query: 276 QARSNE 281
++ + E
Sbjct: 303 RSDAEE 308
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/306 (31%), Positives = 146/306 (47%), Gaps = 52/306 (16%)
Query: 18 EVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPNVLKSHCS 77
E+G G V + P ++A K++ E + + I RE Q + + P ++ + +
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 72
Query: 78 FVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHH-HGHIHRD 136
F SD + + M M GGS +LK A E ++ + V+KGL YL H +HRD
Sbjct: 73 FYSDGEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLREKHKIMHRD 130
Query: 137 VKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFKA 196
VK NIL++ RG IKL DFGVS L DS M N+FVGT +M+PE ++ H Y ++
Sbjct: 131 VKPSNILVNSRGEIKLCDFGVSGQLIDS-----MANSFVGTRSYMSPERLQGTH-YSVQS 184
Query: 197 DIWSFGITALELAHGHAP----------------------------------FSKY---- 218
DIWS G++ +E+A G P S Y
Sbjct: 185 DIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDS 244
Query: 219 -PPMKV--LLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSFFK 275
PPM + LL + N PP FS F+ + CL+K+P++R K+L+ H+F K
Sbjct: 245 RPPMAIFELLDYIVNEPP--PKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIK 302
Query: 276 QARSNE 281
++ + E
Sbjct: 303 RSDAEE 308
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 101/336 (30%), Positives = 151/336 (44%), Gaps = 61/336 (18%)
Query: 18 EVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPNVLKSHCS 77
E+G G V + P I+A K++ E + + I RE Q + + P ++ + +
Sbjct: 23 ELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 82
Query: 78 FVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHH-HGHIHRD 136
F SD + + M M GGS +LK A E ++ + VL+GL YL H +HRD
Sbjct: 83 FYSDGEISICMEHMDGGSLDQVLKEA--KRIPEEILGKVSIAVLRGLAYLREKHQIMHRD 140
Query: 137 VKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFKA 196
VK NIL++ RG IKL DFGVS L DS M N+FVGT +MAPE ++ H Y ++
Sbjct: 141 VKPSNILVNSRGEIKLCDFGVSGQLIDS-----MANSFVGTRSYMAPERLQGTH-YSVQS 194
Query: 197 DIWSFGITALELAHGHAPF----------------------------------------- 215
DIWS G++ +ELA G P
Sbjct: 195 DIWSMGLSLVELAVGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSGH 254
Query: 216 --SKYPPMKV--LLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKH 271
P M + LL + N PP + F+ F++ + CL+K+P++R K L H
Sbjct: 255 GMDSRPAMAIFELLDYIVNEPP--PKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLTNH 312
Query: 272 SFFKQARSNE-----YIARTLLEGLPALGDRIKALK 302
+F K++ E ++ +TL P R L+
Sbjct: 313 TFIKRSEVEEVDFAGWLCKTLRLNQPGTPTRTAVLE 348
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/257 (31%), Positives = 136/257 (52%), Gaps = 24/257 (9%)
Query: 54 SNISREAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGS----CLHILKAAYPDGFE 109
S + E + L+DHPN++K + F N ++VM GG +H +K F
Sbjct: 81 SKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMK------FN 134
Query: 110 EVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVR---GAIKLGDFGVSACLFDSGD 166
EV A I+++VL G+ YLH H +HRD+K N+L++ + IK+ DFG+SA +F++
Sbjct: 135 EVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSA-VFENQK 193
Query: 167 RQRMRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLM 226
+ + R +GT ++APEV+ + YD K D+WS G+ L G+ PF ++ L
Sbjct: 194 KMKER---LGTAYYIAPEVLRK--KYDEKCDVWSIGVILFILLAGYPPFGGQTDQEI-LR 247
Query: 227 TLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSFFKQARSNEYIART 286
++ D + S+ K +I L D +R SA++ L+H + K+ S + +
Sbjct: 248 KVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEMCSKK---ES 304
Query: 287 LLEGLPALGDRIKALKK 303
+E LP+L + I+ ++K
Sbjct: 305 GIE-LPSLANAIENMRK 320
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/280 (31%), Positives = 140/280 (50%), Gaps = 17/280 (6%)
Query: 13 YTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSD----LSNISREAQTMILVDH 68
Y L E +G+G + V R + + AVKI+D + S ++ REA ++ H
Sbjct: 26 YELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 69 PNVLKSHCSFVSDHNLWVVMPFMSGGS-CLHILKAAYPDGF--EEVVIATILREVLKGLD 125
P++++ ++ SD L++V FM G C I+K A GF E V + +R++L+ L
Sbjct: 86 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRA-DAGFVYSEAVASHYMRQILEALR 144
Query: 126 YLHHHGHIHRDVKSGNILIDVR---GAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMA 182
Y H + IHRDVK N+L+ + +KLGDFGV+ L +SG R VGTP +MA
Sbjct: 145 YCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGR---VGTPHFMA 201
Query: 183 PEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRK 242
PEV+++ Y D+W G+ L G PF Y + L + ++ +
Sbjct: 202 PEVVKR-EPYGKPVDVWGCGVILFILLSGCLPF--YGTKERLFEGIIKGKYKMNPRQWSH 258
Query: 243 FSKSFKQMIASCLVKDPSKRPSAKKLLKHSFFKQARSNEY 282
S+S K ++ L+ DP++R + + L H + K+ Y
Sbjct: 259 ISESAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAY 298
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 131/259 (50%), Gaps = 15/259 (5%)
Query: 12 HYTLYEEVGQGVSASVHRALCIPFNEIVAVK---ILDFERDNSDLSNISREAQTMILVDH 68
++ + +++G+G + V+RA C+ VA+K I D D ++ +E + ++H
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDL-MDAKARADCIKEIDLLKQLNH 91
Query: 69 PNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDG--FEEVVIATILREVLKGLDY 126
PNV+K + SF+ D+ L +V+ G ++K E + ++ L++
Sbjct: 92 PNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEH 151
Query: 127 LHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVM 186
+H +HRD+K N+ I G +KLGD G+ F S + ++ VGTP +M+PE +
Sbjct: 152 MHSRRVMHRDIKPANVFITATGVVKLGDLGLGR-FFSS--KTTAAHSLVGTPYYMSPERI 208
Query: 187 EQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYE--RDRKFS 244
+ +GY+FK+DIWS G E+A +PF K+ L +L DY +S
Sbjct: 209 HE-NGYNFKSDIWSLGCLLYEMAALQSPFYG---DKMNLYSLCKKIEQCDYPPLPSDHYS 264
Query: 245 KSFKQMIASCLVKDPSKRP 263
+ +Q++ C+ DP KRP
Sbjct: 265 EELRQLVNMCINPDPEKRP 283
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 128/265 (48%), Gaps = 16/265 (6%)
Query: 18 EVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQ-TMILVDHPNVLKSHC 76
E+G+G V + +P +I+AVK + ++ + + + +M VD P + +
Sbjct: 58 ELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYG 117
Query: 77 SFVSDHNLWVVMPFMSGGSCLHILKAAYPDG--FEEVVIATILREVLKGLDYLHHH-GHI 133
+ + ++W+ M M S K G E ++ I ++K L++LH I
Sbjct: 118 ALFREGDVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVI 176
Query: 134 HRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVME---QLH 190
HRDVK N+LI+ G +K+ DFG+S L DS + G +MAPE +
Sbjct: 177 HRDVKPSNVLINALGQVKMCDFGISGYLVDS----VAKTIDAGCKPYMAPERINPELNQK 232
Query: 191 GYDFKADIWSFGITALELAHGHAPFSKY-PPMKVLLMTLQNAPPGLDYERDRKFSKSFKQ 249
GY K+DIWS GIT +ELA P+ + P + L ++ P L + KFS F
Sbjct: 233 GYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPAD---KFSAEFVD 289
Query: 250 MIASCLVKDPSKRPSAKKLLKHSFF 274
+ CL K+ +RP+ +L++H FF
Sbjct: 290 FTSQCLKKNSKERPTYPELMQHPFF 314
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/218 (33%), Positives = 113/218 (51%), Gaps = 16/218 (7%)
Query: 59 EAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLH--ILKAAYPDGFEEVVIATI 116
E + +DHPN++K + F N ++VM GG IL+ F EV A I
Sbjct: 54 EVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQK----FSEVDAAVI 109
Query: 117 LREVLKGLDYLHHHGHIHRDVKSGNILIDVR---GAIKLGDFGVSACLFDSGDRQRMRNT 173
+++VL G YLH H +HRD+K N+L++ + IK+ DFG+SA F+ G + + R
Sbjct: 110 MKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAH-FEVGGKMKER-- 166
Query: 174 FVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPP 233
+GT ++APEV+ + YD K D+WS G+ L G+ PF ++ L ++
Sbjct: 167 -LGTAYYIAPEVLRK--KYDEKCDVWSCGVILYILLCGYPPFGGQTDQEI-LKRVEKGKF 222
Query: 234 GLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKH 271
D + S KQ++ L +PSKR SA++ L H
Sbjct: 223 SFDPPDWTQVSDEAKQLVKLMLTYEPSKRISAEEALNH 260
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 130/275 (47%), Gaps = 15/275 (5%)
Query: 10 AEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILD-FERDNSDLSNISREAQTMILVDH 68
AE Y + +G+G V + + AVK+++ N D S I RE + + +DH
Sbjct: 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH 80
Query: 69 PNVLKSHCSFVSDHNLWVVMPFMSGGSCL-HILKAAYPDGFEEVVIATILREVLKGLDYL 127
PN++K + ++V +GG I+K F E A I+++V G+ Y+
Sbjct: 81 PNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRK---RFSEHDAARIIKQVFSGITYM 137
Query: 128 HHHGHIHRDVKSGNILIDVRGA---IKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPE 184
H H +HRD+K NIL++ + IK+ DFG+S C F + + R +GT ++APE
Sbjct: 138 HKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTC-FQQNTKMKDR---IGTAYYIAPE 193
Query: 185 VMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFS 244
V+ YD K D+WS G+ L G PF + L ++ D + R S
Sbjct: 194 VLR--GTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDI-LKRVETGKYAFDLPQWRTIS 250
Query: 245 KSFKQMIASCLVKDPSKRPSAKKLLKHSFFKQARS 279
K +I L PS R +A + L+H + ++ S
Sbjct: 251 DDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYSS 285
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 118/244 (48%), Gaps = 15/244 (6%)
Query: 40 AVKILDFERDNSDLSNISREAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHI 99
+K ++ +R + I E + + +DHPN++K F HN+++VM GG L
Sbjct: 51 VIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLER 110
Query: 100 LKAAYPDG--FEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILI---DVRGAIKLGD 154
+ +A G E +A ++++++ L Y H +H+D+K NIL IK+ D
Sbjct: 111 IVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIID 170
Query: 155 FGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAP 214
FG+ A LF S + GT +MAPEV ++ FK DIWS G+ L G P
Sbjct: 171 FGL-AELFKSDEHS---TNAAGTALYMAPEVFKR--DVTFKCDIWSAGVVMYFLLTGCLP 224
Query: 215 FSKYPPMKVLLMTLQNAPPGLDYERD-RKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSF 273
F+ +V P +Y + R + ++ L KDP +RPSA ++L H +
Sbjct: 225 FTGTSLEEVQQKATYKEP---NYAVECRPLTPQAVDLLKQMLTKDPERRPSAAQVLHHEW 281
Query: 274 FKQA 277
FKQA
Sbjct: 282 FKQA 285
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 131/277 (47%), Gaps = 15/277 (5%)
Query: 10 AEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILD-FERDNSDLSNISREAQTMILVDH 68
AE Y + +G+G V + + AVK+++ N D S I RE + + +DH
Sbjct: 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH 80
Query: 69 PNVLKSHCSFVSDHNLWVVMPFMSGGSCL-HILKAAYPDGFEEVVIATILREVLKGLDYL 127
PN++K + ++V +GG I+K F E A I+++V G+ Y+
Sbjct: 81 PNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRK---RFSEHDAARIIKQVFSGITYM 137
Query: 128 HHHGHIHRDVKSGNILIDVRGA---IKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPE 184
H H +HRD+K NIL++ + IK+ DFG+S C F + + R +GT ++APE
Sbjct: 138 HKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTC-FQQNTKMKDR---IGTAYYIAPE 193
Query: 185 VMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFS 244
V+ YD K D+WS G+ L G PF + L ++ D + R S
Sbjct: 194 VLRGT--YDEKCDVWSAGVILYILLSGTPPFYGKNEYDI-LKRVETGKYAFDLPQWRTIS 250
Query: 245 KSFKQMIASCLVKDPSKRPSAKKLLKHSFFKQARSNE 281
K +I L PS R +A + L+H + ++ S E
Sbjct: 251 DDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYSSEE 287
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 128/265 (48%), Gaps = 16/265 (6%)
Query: 18 EVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQ-TMILVDHPNVLKSHC 76
E+G+G V + +P +I+AVK + ++ + + + +M VD P + +
Sbjct: 14 ELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYG 73
Query: 77 SFVSDHNLWVVMPFMSGGSCLHILKAAYPDG--FEEVVIATILREVLKGLDYLHHH-GHI 133
+ + ++W+ M M S K G E ++ I ++K L++LH I
Sbjct: 74 ALFREGDVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVI 132
Query: 134 HRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVME---QLH 190
HRDVK N+LI+ G +K+ DFG+S L D ++ G +MAPE +
Sbjct: 133 HRDVKPSNVLINALGQVKMCDFGISGYLVDD----VAKDIDAGCKPYMAPERINPELNQK 188
Query: 191 GYDFKADIWSFGITALELAHGHAPFSKY-PPMKVLLMTLQNAPPGLDYERDRKFSKSFKQ 249
GY K+DIWS GIT +ELA P+ + P + L ++ P L + KFS F
Sbjct: 189 GYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPAD---KFSAEFVD 245
Query: 250 MIASCLVKDPSKRPSAKKLLKHSFF 274
+ CL K+ +RP+ +L++H FF
Sbjct: 246 FTSQCLKKNSKERPTYPELMQHPFF 270
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 88/284 (30%), Positives = 135/284 (47%), Gaps = 29/284 (10%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMIL--VD- 67
E+Y E +G+GVS+ V R + P + AVKI+D S + +E + L VD
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 68 ------HPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVL 121
HPN+++ ++ ++ ++V M G L E I+R +L
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT--LSEKETRKIMRALL 134
Query: 122 KGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWM 181
+ + LH +HRD+K NIL+D IKL DFG S C D G++ R + GTP ++
Sbjct: 135 EVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFS-CQLDPGEKLR---SVCGTPSYL 190
Query: 182 APEVME-----QLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTL----QNAP 232
APE++E GY + D+WS G+ L G PF M +L M + Q
Sbjct: 191 APEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGS 250
Query: 233 PGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSFFKQ 276
P D +S + K +++ LV P KR +A++ L H FF+Q
Sbjct: 251 PEWD-----DYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 289
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 73/218 (33%), Positives = 113/218 (51%), Gaps = 16/218 (7%)
Query: 59 EAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLH--ILKAAYPDGFEEVVIATI 116
E + +DHPN++K + F N ++VM GG IL+ F EV A I
Sbjct: 71 EVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQK----FSEVDAAVI 126
Query: 117 LREVLKGLDYLHHHGHIHRDVKSGNILIDVR---GAIKLGDFGVSACLFDSGDRQRMRNT 173
+++VL G YLH H +HRD+K N+L++ + IK+ DFG+SA F+ G + + R
Sbjct: 127 MKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAH-FEVGGKMKER-- 183
Query: 174 FVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPP 233
+GT ++APEV+ + YD K D+WS G+ L G+ PF ++ L ++
Sbjct: 184 -LGTAYYIAPEVLRK--KYDEKCDVWSCGVILYILLCGYPPFGGQTDQEI-LKRVEKGKF 239
Query: 234 GLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKH 271
D + S KQ++ L +PSKR SA++ L H
Sbjct: 240 SFDPPDWTQVSDEAKQLVKLMLTYEPSKRISAEEALNH 277
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 88/284 (30%), Positives = 134/284 (47%), Gaps = 29/284 (10%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMIL--VD- 67
E+Y E +G+GVS+ V R + P + AVKI+D S + +E + L VD
Sbjct: 4 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 63
Query: 68 ------HPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVL 121
HPN+++ ++ ++ ++V M G L E I+R +L
Sbjct: 64 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT--LSEKETRKIMRALL 121
Query: 122 KGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWM 181
+ + LH +HRD+K NIL+D IKL DFG S C D G++ R GTP ++
Sbjct: 122 EVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFS-CQLDPGEKLR---EVCGTPSYL 177
Query: 182 APEVME-----QLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTL----QNAP 232
APE++E GY + D+WS G+ L G PF M +L M + Q
Sbjct: 178 APEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGS 237
Query: 233 PGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSFFKQ 276
P D +S + K +++ LV P KR +A++ L H FF+Q
Sbjct: 238 PEWD-----DYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 276
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 140/287 (48%), Gaps = 23/287 (8%)
Query: 6 YPIGAEHYTLYEE---VGQGVSASVHRALCIPFNEIVAVKILDF--ERDNSDLSNISREA 60
+ E Y Y+ +G+GVS+ V R + AVKI++ ER + + REA
Sbjct: 86 WAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREA 145
Query: 61 ---QTMIL---VDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIA 114
+T IL HP+++ S+ S +++V M G L E
Sbjct: 146 TRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKV--ALSEKETR 203
Query: 115 TILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTF 174
+I+R +L+ + +LH + +HRD+K NIL+D I+L DFG S C + G++ R
Sbjct: 204 SIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFS-CHLEPGEKLR---EL 259
Query: 175 VGTPCWMAPEV----MEQLH-GYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ 229
GTP ++APE+ M++ H GY + D+W+ G+ L G PF + +L M ++
Sbjct: 260 CGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIME 319
Query: 230 NAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSFFKQ 276
E D + S + K +I+ L DP R +A++ L+H FF++
Sbjct: 320 GQYQFSSPEWDDR-SSTVKDLISRLLQVDPEARLTAEQALQHPFFER 365
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/284 (30%), Positives = 134/284 (47%), Gaps = 29/284 (10%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMIL--VD- 67
E+Y E +G+GVS+ V R + P + AVKI+D S + +E + L VD
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 68 ------HPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVL 121
HPN+++ ++ ++ ++V M G L E I+R +L
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT--LSEKETRKIMRALL 134
Query: 122 KGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWM 181
+ + LH +HRD+K NIL+D IKL DFG S C D G++ R GTP ++
Sbjct: 135 EVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFS-CQLDPGEKLR---EVCGTPSYL 190
Query: 182 APEVME-----QLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTL----QNAP 232
APE++E GY + D+WS G+ L G PF M +L M + Q
Sbjct: 191 APEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGS 250
Query: 233 PGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSFFKQ 276
P D +S + K +++ LV P KR +A++ L H FF+Q
Sbjct: 251 PEWD-----DYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 289
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/280 (30%), Positives = 138/280 (49%), Gaps = 17/280 (6%)
Query: 13 YTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSD----LSNISREAQTMILVDH 68
Y L E +G+G + V R + + AVKI+D + S ++ REA ++ H
Sbjct: 28 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 87
Query: 69 PNVLKSHCSFVSDHNLWVVMPFMSGGS-CLHILKAAYPDGF--EEVVIATILREVLKGLD 125
P++++ ++ SD L++V FM G C I+K A GF E V + +R++L+ L
Sbjct: 88 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRA-DAGFVYSEAVASHYMRQILEALR 146
Query: 126 YLHHHGHIHRDVKSGNILIDVR---GAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMA 182
Y H + IHRDVK +L+ + +KLG FGV+ L +SG R VGTP +MA
Sbjct: 147 YCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGR---VGTPHFMA 203
Query: 183 PEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRK 242
PEV+++ Y D+W G+ L G PF Y + L + ++ +
Sbjct: 204 PEVVKR-EPYGKPVDVWGCGVILFILLSGCLPF--YGTKERLFEGIIKGKYKMNPRQWSH 260
Query: 243 FSKSFKQMIASCLVKDPSKRPSAKKLLKHSFFKQARSNEY 282
S+S K ++ L+ DP++R + + L H + K+ Y
Sbjct: 261 ISESAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAY 300
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 130/275 (47%), Gaps = 15/275 (5%)
Query: 10 AEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILD-FERDNSDLSNISREAQTMILVDH 68
AE Y + +G+G V + + AVK+++ N D S I RE + + +DH
Sbjct: 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH 80
Query: 69 PNVLKSHCSFVSDHNLWVVMPFMSGGSCL-HILKAAYPDGFEEVVIATILREVLKGLDYL 127
PN++K + ++V +GG I+K F E A I+++V G+ Y+
Sbjct: 81 PNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRK---RFSEHDAARIIKQVFSGITYM 137
Query: 128 HHHGHIHRDVKSGNILIDVRGA---IKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPE 184
H H +HRD+K NIL++ + IK+ DFG+S C F + + R +GT ++APE
Sbjct: 138 HKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTC-FQQNTKMKDR---IGTAYYIAPE 193
Query: 185 VMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFS 244
V+ YD K D+WS G+ L G PF + L ++ D + R S
Sbjct: 194 VLRGT--YDEKCDVWSAGVILYILLSGTPPFYGKNEYDI-LKRVETGKYAFDLPQWRTIS 250
Query: 245 KSFKQMIASCLVKDPSKRPSAKKLLKHSFFKQARS 279
K +I L PS R +A + L+H + ++ S
Sbjct: 251 DDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYSS 285
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/280 (30%), Positives = 138/280 (49%), Gaps = 17/280 (6%)
Query: 13 YTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSD----LSNISREAQTMILVDH 68
Y L E +G+G + V R + + AVKI+D + S ++ REA ++ H
Sbjct: 26 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 69 PNVLKSHCSFVSDHNLWVVMPFMSGGS-CLHILKAAYPDGF--EEVVIATILREVLKGLD 125
P++++ ++ SD L++V FM G C I+K A GF E V + +R++L+ L
Sbjct: 86 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRA-DAGFVYSEAVASHYMRQILEALR 144
Query: 126 YLHHHGHIHRDVKSGNILIDVR---GAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMA 182
Y H + IHRDVK +L+ + +KLG FGV+ L +SG R VGTP +MA
Sbjct: 145 YCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGR---VGTPHFMA 201
Query: 183 PEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRK 242
PEV+++ Y D+W G+ L G PF Y + L + ++ +
Sbjct: 202 PEVVKR-EPYGKPVDVWGCGVILFILLSGCLPF--YGTKERLFEGIIKGKYKMNPRQWSH 258
Query: 243 FSKSFKQMIASCLVKDPSKRPSAKKLLKHSFFKQARSNEY 282
S+S K ++ L+ DP++R + + L H + K+ Y
Sbjct: 259 ISESAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAY 298
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 134/283 (47%), Gaps = 16/283 (5%)
Query: 12 HYTLYEEVGQGVSASVH--RALCIP-FNEIVAVKILD-FERDNSDLSNISREAQTMILVD 67
H+ L + +GQG V R + P + A+K+L D E + V+
Sbjct: 29 HFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVN 88
Query: 68 HPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYL 127
HP V+K H +F ++ L++++ F+ GG L F E + L E+ GLD+L
Sbjct: 89 HPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVM--FTEEDVKFYLAELALGLDHL 146
Query: 128 HHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVME 187
H G I+RD+K NIL+D G IKL DFG+S ++ D ++ +F GT +MAPEV+
Sbjct: 147 HSLGIIYRDLKPENILLDEEGHIKLTDFGLSK---EAIDHEKKAYSFCGTVEYMAPEVVN 203
Query: 188 QLHGYDFKADIWSFGITALELAHGHAPFS---KYPPMKVLLMTLQNAPPGLDYERDRKFS 244
+ G+ AD WS+G+ E+ G PF + M ++L P L E
Sbjct: 204 R-QGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMPQFLSTEAQSLLR 262
Query: 245 KSFKQMIASCLVKDPSKRPSAKKLLKHSFFKQARSNEYIARTL 287
FK+ A+ L P A+++ +H F+ N+ R +
Sbjct: 263 ALFKRNPANRLGSGPD---GAEEIKRHVFYSTIDWNKLYRREI 302
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 140/270 (51%), Gaps = 11/270 (4%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNS-DLSNISREAQTMILVDHP 69
+ Y L+EE+G+G + V R + IP + A KI++ ++ ++ D + REA+ L+ HP
Sbjct: 4 DEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHP 63
Query: 70 NVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHH 129
N+++ H S + ++V ++GG + A + + E + ++++L+ +++ H
Sbjct: 64 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAR--EYYSEADASHCIQQILESVNHCHL 121
Query: 130 HGHIHRDVKSGNILIDVR---GAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVM 186
+G +HRD+K N+L+ + A+KL DFG++ + GD+Q F GTP +++PEV+
Sbjct: 122 NGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEV--QGDQQAWFG-FAGTPGYLSPEVL 178
Query: 187 EQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKS 246
+ Y D+W+ G+ L G+ PF ++ A E D +
Sbjct: 179 RK-DPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWD-TVTPE 236
Query: 247 FKQMIASCLVKDPSKRPSAKKLLKHSFFKQ 276
K +I L +P+KR +A + LKH + Q
Sbjct: 237 AKDLINKMLTINPAKRITASEALKHPWICQ 266
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 127/273 (46%), Gaps = 9/273 (3%)
Query: 4 KKYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTM 63
K Y ++Y L+E +G G A V A I E+VA+KI+D SDL I E + +
Sbjct: 3 KDYDELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEAL 62
Query: 64 ILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKG 123
+ H ++ + + + + +++V+ + GG + + D E + R+++
Sbjct: 63 KNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQ--DRLSEEETRVVFRQIVSA 120
Query: 124 LDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAP 183
+ Y+H G+ HRD+K N+L D +KL DFG+ C G++ T G+ + AP
Sbjct: 121 VAYVHSQGYAHRDLKPENLLFDEYHKLKLIDFGL--CAKPKGNKDYHLQTCCGSLAYAAP 178
Query: 184 EVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKF 243
E+++ +AD+WS GI L G PF M + ++ Y+ +
Sbjct: 179 ELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGK-----YDVPKWL 233
Query: 244 SKSFKQMIASCLVKDPSKRPSAKKLLKHSFFKQ 276
S S ++ L DP KR S K LL H + Q
Sbjct: 234 SPSSILLLQQMLQVDPKKRISMKNLLNHPWIMQ 266
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 131/261 (50%), Gaps = 14/261 (5%)
Query: 12 HYTLYEEVGQGVSASVHRALCIPFNEIVAVKILD-FERDNSDLSNISREAQTMILVDHPN 70
+Y L + +G+G A V A I + VAVKI+D + ++S L + RE + M +++HPN
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 71 VLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHH 130
++K ++ L++VM + SGG L A +E R+++ + Y H
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH--GRMKEKEARAKFRQIVSAVQYCHQK 132
Query: 131 GHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLH 190
+HRD+K+ N+L+D IK+ DFG S F G++ +TF G+P + APE+ Q
Sbjct: 133 FIVHRDLKAENLLLDADMNIKIADFGFSNE-FTFGNKL---DTFCGSPPYAAPELF-QGK 187
Query: 191 GYDF-KADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQ 249
YD + D+WS G+ L G PF ++ L+ Y S +
Sbjct: 188 KYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK-----YRIPFYMSTDCEN 242
Query: 250 MIASCLVKDPSKRPSAKKLLK 270
++ L+ +PSKR + ++++K
Sbjct: 243 LLKKFLILNPSKRGTLEQIMK 263
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 141/287 (49%), Gaps = 15/287 (5%)
Query: 12 HYTLYEEVGQGVSASVHRALCIPFNEIVAVKILD-FERDNSDLSNISREAQTMILVDHPN 70
+Y L + +G+G A V A I + VAVKI+D + ++S L + RE + M +++HPN
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 71 VLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHH 130
++K ++ L++VM + SGG L A +E R+++ + Y H
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH--GRMKEKEARAKFRQIVSAVQYCHQK 132
Query: 131 GHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLH 190
+HRD+K+ N+L+D IK+ DFG S F G++ +TF G+P + APE+ Q
Sbjct: 133 FIVHRDLKAENLLLDADMNIKIADFGFSNE-FTFGNKL---DTFCGSPPYAAPELF-QGK 187
Query: 191 GYDF-KADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQ 249
YD + D+WS G+ L G PF ++ L+ Y S +
Sbjct: 188 KYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK-----YRIPFYMSTDCEN 242
Query: 250 MIASCLVKDPSKRPSAKKLLKHSFFKQARSNEYIARTLLEGLPALGD 296
++ L+ +PSKR + ++++K + ++ + + +E LP D
Sbjct: 243 LLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDEL-KPYVEPLPDYKD 288
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 140/270 (51%), Gaps = 11/270 (4%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNS-DLSNISREAQTMILVDHP 69
+ Y L+EE+G+G + V R + IP + A KI++ ++ ++ D + REA+ L+ HP
Sbjct: 4 DEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHP 63
Query: 70 NVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHH 129
N+++ H S + ++V ++GG + A + + E + ++++L+ +++ H
Sbjct: 64 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAR--EYYSEADASHCIQQILESVNHCHL 121
Query: 130 HGHIHRDVKSGNILIDVR---GAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVM 186
+G +HRD+K N+L+ + A+KL DFG++ + GD+Q F GTP +++PEV+
Sbjct: 122 NGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEV--QGDQQAWFG-FAGTPGYLSPEVL 178
Query: 187 EQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKS 246
+ Y D+W+ G+ L G+ PF ++ A E D +
Sbjct: 179 RK-DPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWD-TVTPE 236
Query: 247 FKQMIASCLVKDPSKRPSAKKLLKHSFFKQ 276
K +I L +P+KR +A + LKH + Q
Sbjct: 237 AKDLINKMLTINPAKRITASEALKHPWICQ 266
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 115/232 (49%), Gaps = 12/232 (5%)
Query: 59 EAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILR 118
E ++ V+HP ++K H +F ++ L++++ F+ GG L F E + L
Sbjct: 76 ERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVM--FTEEDVKFYLA 133
Query: 119 EVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTP 178
E+ LD+LH G I+RD+K NIL+D G IKL DFG+S +S D ++ +F GT
Sbjct: 134 ELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDHEKKAYSFCGTV 190
Query: 179 CWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFS---KYPPMKVLLMTLQNAPPGL 235
+MAPEV+ + G+ AD WSFG+ E+ G PF + M ++L P L
Sbjct: 191 EYMAPEVVNR-RGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFL 249
Query: 236 DYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSFFKQARSNEYIARTL 287
E FK+ A+ L P +++ +HSFF N+ R +
Sbjct: 250 SPEAQSLLRMLFKRNPANRLGAGPD---GVEEIKRHSFFSTIDWNKLYRREI 298
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 137/281 (48%), Gaps = 19/281 (6%)
Query: 10 AEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILD-FER-DNSDLSNISREAQTMILVD 67
AE Y + + +G+G V ++ A+K+L FE SD + E M +
Sbjct: 74 AEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN 133
Query: 68 HPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHIL-KAAYPDGFEEVVIATILREVLKGLDY 126
P V++ C+F D L++VM +M GG ++++ P+ + + A EV+ LD
Sbjct: 134 SPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTA----EVVLALDA 189
Query: 127 LHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVM 186
+H G IHRDVK N+L+D G +KL DFG + ++G +T VGTP +++PEV+
Sbjct: 190 IHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETG--MVHCDTAVGTPDYISPEVL 247
Query: 187 EQLHG---YDFKADIWSFGITALELAHGHAPFSKYPPMKVL--LMTLQNAPPGLDYERDR 241
+ G Y + D WS G+ E+ G PF + +M +N+ L + D
Sbjct: 248 KSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNS---LCFPEDA 304
Query: 242 KFSKSFKQMIASCLVKDPSK--RPSAKKLLKHSFFKQARSN 280
+ SK K +I + L + R +++ +H FFK + N
Sbjct: 305 EISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFFKNDQWN 345
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 131/261 (50%), Gaps = 14/261 (5%)
Query: 12 HYTLYEEVGQGVSASVHRALCIPFNEIVAVKILD-FERDNSDLSNISREAQTMILVDHPN 70
+Y L + +G+G A V A I + VAVKI+D + ++S L + RE + M +++HPN
Sbjct: 8 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 67
Query: 71 VLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHH 130
++K ++ L++VM + SGG L A +E R+++ + Y H
Sbjct: 68 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH--GWMKEKEARAKFRQIVSAVQYCHQK 125
Query: 131 GHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLH 190
+HRD+K+ N+L+D IK+ DFG S F G++ +TF G+P + APE+ Q
Sbjct: 126 FIVHRDLKAENLLLDADMNIKIADFGFSNE-FTFGNKL---DTFCGSPPYAAPELF-QGK 180
Query: 191 GYDF-KADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQ 249
YD + D+WS G+ L G PF ++ L+ Y S +
Sbjct: 181 KYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK-----YRIPFYMSTDCEN 235
Query: 250 MIASCLVKDPSKRPSAKKLLK 270
++ L+ +PSKR + ++++K
Sbjct: 236 LLKKFLILNPSKRGTLEQIMK 256
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 131/261 (50%), Gaps = 14/261 (5%)
Query: 12 HYTLYEEVGQGVSASVHRALCIPFNEIVAVKILD-FERDNSDLSNISREAQTMILVDHPN 70
+Y L + +G+G A V A I + VAV+I+D + ++S L + RE + M +++HPN
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 71 VLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHH 130
++K ++ L++VM + SGG L A +E R+++ + Y H
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH--GRMKEKEARAKFRQIVSAVQYCHQK 132
Query: 131 GHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLH 190
+HRD+K+ N+L+D IK+ DFG S F G++ +TF G+P + APE+ Q
Sbjct: 133 FIVHRDLKAENLLLDADMNIKIADFGFSNE-FTFGNKL---DTFCGSPPYAAPELF-QGK 187
Query: 191 GYDF-KADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQ 249
YD + D+WS G+ L G PF ++ L+ Y S +
Sbjct: 188 KYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK-----YRIPFYMSTDCEN 242
Query: 250 MIASCLVKDPSKRPSAKKLLK 270
++ L+ +PSKR + ++++K
Sbjct: 243 LLKKFLILNPSKRGTLEQIMK 263
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 115/232 (49%), Gaps = 12/232 (5%)
Query: 59 EAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILR 118
E ++ V+HP ++K H +F ++ L++++ F+ GG L F E + L
Sbjct: 77 ERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVM--FTEEDVKFYLA 134
Query: 119 EVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTP 178
E+ LD+LH G I+RD+K NIL+D G IKL DFG+S +S D ++ +F GT
Sbjct: 135 ELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDHEKKAYSFCGTV 191
Query: 179 CWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFS---KYPPMKVLLMTLQNAPPGL 235
+MAPEV+ + G+ AD WSFG+ E+ G PF + M ++L P L
Sbjct: 192 EYMAPEVVNR-RGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFL 250
Query: 236 DYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSFFKQARSNEYIARTL 287
E FK+ A+ L P +++ +HSFF N+ R +
Sbjct: 251 SPEAQSLLRMLFKRNPANRLGAGPD---GVEEIKRHSFFSTIDWNKLYRREI 299
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 115/232 (49%), Gaps = 12/232 (5%)
Query: 59 EAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILR 118
E ++ V+HP ++K H +F ++ L++++ F+ GG L F E + L
Sbjct: 76 ERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVM--FTEEDVKFYLA 133
Query: 119 EVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTP 178
E+ LD+LH G I+RD+K NIL+D G IKL DFG+S +S D ++ +F GT
Sbjct: 134 ELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDHEKKAYSFCGTV 190
Query: 179 CWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFS---KYPPMKVLLMTLQNAPPGL 235
+MAPEV+ + G+ AD WSFG+ E+ G PF + M ++L P L
Sbjct: 191 EYMAPEVVNR-RGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFL 249
Query: 236 DYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSFFKQARSNEYIARTL 287
E FK+ A+ L P +++ +HSFF N+ R +
Sbjct: 250 SPEAQSLLRMLFKRNPANRLGAGPD---GVEEIKRHSFFSTIDWNKLYRREI 298
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/267 (32%), Positives = 131/267 (49%), Gaps = 33/267 (12%)
Query: 17 EEVGQGVSASVHRALCIPFNEIVAVKIL---DF--ERDNSDLSNISREAQTMILVDHPNV 71
E++G G +VHRA VAVKIL DF ER N L RE M + HPN+
Sbjct: 43 EKIGAGSFGTVHRAEW--HGSDVAVKILMEQDFHAERVNEFL----REVAIMKRLRHPNI 96
Query: 72 LKSHCSFVSDHNLWVVMPFMSGGSCLHIL-KAAYPDGFEEVVIATILREVLKGLDYLHHH 130
+ + NL +V ++S GS +L K+ + +E ++ +V KG++YLH+
Sbjct: 97 VLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR 156
Query: 131 GH--IHRDVKSGNILIDVRGAIKLGDFGVS---ACLFDSGDRQRMRNTFVGTPCWMAPEV 185
+HR++KS N+L+D + +K+ DFG+S A F S + GTP WMAPEV
Sbjct: 157 NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSS------KSAAGTPEWMAPEV 210
Query: 186 MEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYER---DRK 242
+ + K+D++SFG+ ELA P+ P +V+ A G +R R
Sbjct: 211 LRD-EPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVV------AAVGFKCKRLEIPRN 263
Query: 243 FSKSFKQMIASCLVKDPSKRPSAKKLL 269
+ +I C +P KRPS ++
Sbjct: 264 LNPQVAAIIEGCWTNEPWKRPSFATIM 290
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/264 (31%), Positives = 127/264 (48%), Gaps = 27/264 (10%)
Query: 17 EEVGQGVSASVHRALCIPFNEIVAVKIL---DF--ERDNSDLSNISREAQTMILVDHPNV 71
E++G G +VHRA VAVKIL DF ER N L RE M + HPN+
Sbjct: 43 EKIGAGSFGTVHRAEW--HGSDVAVKILMEQDFHAERVNEFL----REVAIMKRLRHPNI 96
Query: 72 LKSHCSFVSDHNLWVVMPFMSGGSCLHIL-KAAYPDGFEEVVIATILREVLKGLDYLHHH 130
+ + NL +V ++S GS +L K+ + +E ++ +V KG++YLH+
Sbjct: 97 VLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR 156
Query: 131 GH--IHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQ 188
+HRD+KS N+L+D + +K+ DFG+S GTP WMAPEV+
Sbjct: 157 NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRL---KASXFLXSKXAAGTPEWMAPEVLRD 213
Query: 189 LHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYER---DRKFSK 245
+ K+D++SFG+ ELA P+ P +V+ A G +R R +
Sbjct: 214 -EPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVV------AAVGFKCKRLEIPRNLNP 266
Query: 246 SFKQMIASCLVKDPSKRPSAKKLL 269
+I C +P KRPS ++
Sbjct: 267 QVAAIIEGCWTNEPWKRPSFATIM 290
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 122/262 (46%), Gaps = 13/262 (4%)
Query: 19 VGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPNVLKSHCSF 78
+G+G V+ + +A+K + ERD+ + E + H N+++ SF
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIP-ERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 88
Query: 79 VSDHNLWVVMPFMSGGSCLHILKAAY-PDGFEEVVIATILREVLKGLDYLHHHGHIHRDV 137
+ + + M + GGS +L++ + P E I +++L+GL YLH + +HRD+
Sbjct: 89 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDI 148
Query: 138 KSGNILIDV-RGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQL-HGYDFK 195
K N+LI+ G +K+ DFG S L TF GT +MAPE++++ GY
Sbjct: 149 KGDNVLINTYSGVLKISDFGTSKRL---AGINPCTETFTGTLQYMAPEIIDKGPRGYGKA 205
Query: 196 ADIWSFGITALELAHGHAPFSKY--PPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIAS 253
ADIWS G T +E+A G PF + P + + + P E S K I
Sbjct: 206 ADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHP----EIPESMSAEAKAFILK 261
Query: 254 CLVKDPSKRPSAKKLLKHSFFK 275
C DP KR A LL F K
Sbjct: 262 CFEPDPDKRACANDLLVDEFLK 283
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 126/263 (47%), Gaps = 18/263 (6%)
Query: 10 AEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKIL--DFERDNSDLSNISREAQTMILVD 67
++ Y L E +G G + VH A + + VAVK+L D RD S REAQ ++
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 68 HPNVLKSHCSFVSDHNL----WVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKG 123
HP ++ + + ++ ++VM ++ G + I+ P + + ++ + +
Sbjct: 71 HPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAI--EVIADACQA 128
Query: 124 LDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAP 183
L++ H +G IHRDVK NI+I A+K+ DFG++ + DSG+ +GT +++P
Sbjct: 129 LNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSP 188
Query: 184 EVMEQLHG--YDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQN--APPGLDYER 239
EQ G D ++D++S G E+ G PF+ P+ V ++ PP +E
Sbjct: 189 ---EQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHE- 244
Query: 240 DRKFSKSFKQMIASCLVKDPSKR 262
S ++ L K+P R
Sbjct: 245 --GLSADLDAVVLKALAKNPENR 265
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 129/261 (49%), Gaps = 14/261 (5%)
Query: 12 HYTLYEEVGQGVSASVHRALCIPFNEIVAVKILD-FERDNSDLSNISREAQTMILVDHPN 70
+Y L + +G+G A V A I + VAVKI+D + ++S L + RE + M +++HPN
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 71 VLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHH 130
++K ++ L++VM + SGG L A +E R+++ + Y H
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH--GRMKEKEARAKFRQIVSAVQYCHQK 132
Query: 131 GHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLH 190
+HRD+K+ N+L+D IK+ DFG S F G++ + F G P + APE+ Q
Sbjct: 133 FIVHRDLKAENLLLDADMNIKIADFGFSNE-FTFGNKL---DAFCGAPPYAAPELF-QGK 187
Query: 191 GYDF-KADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQ 249
YD + D+WS G+ L G PF ++ L+ Y S +
Sbjct: 188 KYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK-----YRIPFYMSTDCEN 242
Query: 250 MIASCLVKDPSKRPSAKKLLK 270
++ L+ +PSKR + ++++K
Sbjct: 243 LLKKFLILNPSKRGTLEQIMK 263
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 124/241 (51%), Gaps = 15/241 (6%)
Query: 48 RDNSDLSNISREAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDG 107
+ +D ++ RE Q + +DHPN++K + F ++V +GG + +
Sbjct: 65 KQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR-- 122
Query: 108 FEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGA---IKLGDFGVSACLFDS 164
F EV A I+R+VL G+ Y+H + +HRD+K N+L++ + I++ DFG+S S
Sbjct: 123 FSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS 182
Query: 165 GDRQRMRNTFVGTPCWMAPEVMEQLHG-YDFKADIWSFGITALELAHGHAPFSKYPPMKV 223
++M++ +GT ++APEV LHG YD K D+WS G+ L G PF+ +
Sbjct: 183 ---KKMKDK-IGTAYYIAPEV---LHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDI 235
Query: 224 LLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSFFKQARSNEYI 283
L ++ + + +K S+S K +I L PS R SA+ L H + Q + E I
Sbjct: 236 -LKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWI-QTYTKEQI 293
Query: 284 A 284
+
Sbjct: 294 S 294
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 129/251 (51%), Gaps = 17/251 (6%)
Query: 40 AVKILDFE--RDNSDLSNISREAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCL 97
AVK++ + +D ++ RE Q + +DHPN++K + F ++V +GG
Sbjct: 78 AVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELF 137
Query: 98 HILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGA---IKLGD 154
+ + F EV A I+R+VL G+ Y+H + +HRD+K N+L++ + I++ D
Sbjct: 138 DEIISRKR--FSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIID 195
Query: 155 FGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHG-YDFKADIWSFGITALELAHGHA 213
FG+S S ++M++ +GT ++APEV LHG YD K D+WS G+ L G
Sbjct: 196 FGLSTHFEAS---KKMKDK-IGTAYYIAPEV---LHGTYDEKCDVWSTGVILYILLSGCP 248
Query: 214 PFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSF 273
PF+ + L ++ + + +K S+S K +I L PS R SA+ L H +
Sbjct: 249 PFNGANEYDI-LKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEW 307
Query: 274 FKQARSNEYIA 284
Q + E I+
Sbjct: 308 I-QTYTKEQIS 317
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 129/275 (46%), Gaps = 15/275 (5%)
Query: 10 AEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILD-FER-DNSDLSNISREAQTMILVD 67
AE Y + + +G+G V ++ A+K+L FE SD + E M +
Sbjct: 68 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN 127
Query: 68 HPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHIL-KAAYPDGFEEVVIATILREVLKGLDY 126
P V++ +F D L++VM +M GG ++++ P+ + A EV+ LD
Sbjct: 128 SPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTA----EVVLALDA 183
Query: 127 LHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVM 186
+H G IHRDVK N+L+D G +KL DFG C+ + + +T VGTP +++PEV+
Sbjct: 184 IHSMGFIHRDVKPDNMLLDKSGHLKLADFG--TCMKMNKEGMVRCDTAVGTPDYISPEVL 241
Query: 187 EQLHG---YDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKF 243
+ G Y + D WS G+ E+ G PF + + N L + D
Sbjct: 242 KSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA-DSLVGTYSKIMNHKNSLTFPDDNDI 300
Query: 244 SKSFKQMIASCLVKDPSK--RPSAKKLLKHSFFKQ 276
SK K +I + L + R +++ +H FFK
Sbjct: 301 SKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKN 335
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 129/251 (51%), Gaps = 17/251 (6%)
Query: 40 AVKILDFE--RDNSDLSNISREAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCL 97
AVK++ + +D ++ RE Q + +DHPN++K + F ++V +GG
Sbjct: 79 AVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELF 138
Query: 98 HILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGA---IKLGD 154
+ + F EV A I+R+VL G+ Y+H + +HRD+K N+L++ + I++ D
Sbjct: 139 DEIISRKR--FSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIID 196
Query: 155 FGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHG-YDFKADIWSFGITALELAHGHA 213
FG+S S ++M++ +GT ++APEV LHG YD K D+WS G+ L G
Sbjct: 197 FGLSTHFEAS---KKMKDK-IGTAYYIAPEV---LHGTYDEKCDVWSTGVILYILLSGCP 249
Query: 214 PFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSF 273
PF+ + L ++ + + +K S+S K +I L PS R SA+ L H +
Sbjct: 250 PFNGANEYDI-LKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEW 308
Query: 274 FKQARSNEYIA 284
Q + E I+
Sbjct: 309 I-QTYTKEQIS 318
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 145/317 (45%), Gaps = 18/317 (5%)
Query: 10 AEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILD-FER-DNSDLSNISREAQTMILVD 67
AE Y + + +G+G V ++ A+K+L FE SD + E M +
Sbjct: 73 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN 132
Query: 68 HPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHIL-KAAYPDGFEEVVIATILREVLKGLDY 126
P V++ +F D L++VM +M GG ++++ P+ + A EV+ LD
Sbjct: 133 SPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTA----EVVLALDA 188
Query: 127 LHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVM 186
+H G IHRDVK N+L+D G +KL DFG C+ + + +T VGTP +++PEV+
Sbjct: 189 IHSMGFIHRDVKPDNMLLDKSGHLKLADFG--TCMKMNKEGMVRCDTAVGTPDYISPEVL 246
Query: 187 EQLHG---YDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKF 243
+ G Y + D WS G+ E+ G PF + + N L + D
Sbjct: 247 KSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA-DSLVGTYSKIMNHKNSLTFPDDNDI 305
Query: 244 SKSFKQMIASCLVKDPSK--RPSAKKLLKHSFFKQAR-SNEYIARTLLEGLPALGDRIKA 300
SK K +I + L + R +++ +H FFK + + E + T+ +P L I
Sbjct: 306 SKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQWAWETLRDTVAPVVPDLSSDIDT 365
Query: 301 --LKKKEEDMLAQKKMP 315
EED ++ P
Sbjct: 366 SNFDDLEEDKGEEETFP 382
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 130/261 (49%), Gaps = 14/261 (5%)
Query: 12 HYTLYEEVGQGVSASVHRALCIPFNEIVAVKILD-FERDNSDLSNISREAQTMILVDHPN 70
+Y L + +G+G A V A I + VAV+I+D + ++S L + RE + M +++HPN
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 71 VLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHH 130
++K ++ L++VM + SGG L A +E R+++ + Y H
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH--GRMKEKEARAKFRQIVSAVQYCHQK 132
Query: 131 GHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLH 190
+HRD+K+ N+L+D IK+ DFG S F G++ + F G+P + APE+ Q
Sbjct: 133 FIVHRDLKAENLLLDADMNIKIADFGFSNE-FTFGNKL---DEFCGSPPYAAPELF-QGK 187
Query: 191 GYDF-KADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQ 249
YD + D+WS G+ L G PF ++ L+ Y S +
Sbjct: 188 KYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK-----YRIPFYMSTDCEN 242
Query: 250 MIASCLVKDPSKRPSAKKLLK 270
++ L+ +PSKR + ++++K
Sbjct: 243 LLKKFLILNPSKRGTLEQIMK 263
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 122/262 (46%), Gaps = 13/262 (4%)
Query: 19 VGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPNVLKSHCSF 78
+G+G V+ + +A+K + ERD+ + E + H N+++ SF
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIP-ERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 74
Query: 79 VSDHNLWVVMPFMSGGSCLHILKAAY-PDGFEEVVIATILREVLKGLDYLHHHGHIHRDV 137
+ + + M + GGS +L++ + P E I +++L+GL YLH + +HRD+
Sbjct: 75 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDI 134
Query: 138 KSGNILIDV-RGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQL-HGYDFK 195
K N+LI+ G +K+ DFG S L TF GT +MAPE++++ GY
Sbjct: 135 KGDNVLINTYSGVLKISDFGTSKRL---AGINPCTETFTGTLQYMAPEIIDKGPRGYGKA 191
Query: 196 ADIWSFGITALELAHGHAPFSKY--PPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIAS 253
ADIWS G T +E+A G PF + P + + + P E S K I
Sbjct: 192 ADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHP----EIPESMSAEAKAFILK 247
Query: 254 CLVKDPSKRPSAKKLLKHSFFK 275
C DP KR A LL F K
Sbjct: 248 CFEPDPDKRACANDLLVDEFLK 269
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 129/275 (46%), Gaps = 15/275 (5%)
Query: 10 AEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILD-FER-DNSDLSNISREAQTMILVD 67
AE Y + + +G+G V ++ A+K+L FE SD + E M +
Sbjct: 73 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN 132
Query: 68 HPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHIL-KAAYPDGFEEVVIATILREVLKGLDY 126
P V++ +F D L++VM +M GG ++++ P+ + A EV+ LD
Sbjct: 133 SPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTA----EVVLALDA 188
Query: 127 LHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVM 186
+H G IHRDVK N+L+D G +KL DFG C+ + + +T VGTP +++PEV+
Sbjct: 189 IHSMGFIHRDVKPDNMLLDKSGHLKLADFG--TCMKMNKEGMVRCDTAVGTPDYISPEVL 246
Query: 187 EQLHG---YDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKF 243
+ G Y + D WS G+ E+ G PF + + N L + D
Sbjct: 247 KSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA-DSLVGTYSKIMNHKNSLTFPDDNDI 305
Query: 244 SKSFKQMIASCLVKDPSK--RPSAKKLLKHSFFKQ 276
SK K +I + L + R +++ +H FFK
Sbjct: 306 SKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKN 340
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 133/276 (48%), Gaps = 17/276 (6%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKIL--DFERDNSDLSNISREAQTMILV-D 67
E + L++ +G+G V A N+ A+K L D + D+ E + + L +
Sbjct: 17 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWE 76
Query: 68 HPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYL 127
HP + C+F + NL+ VM +++GG ++ +++ + F+ E++ GL +L
Sbjct: 77 HPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHK--FDLSRATFYAAEIILGLQFL 134
Query: 128 HHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDS-GDRQRMRNTFVGTPCWMAPEVM 186
H G ++RD+K NIL+D G IK+ DFG+ C + GD + N F GTP ++APE++
Sbjct: 135 HSKGIVYRDLKLDNILLDKDGHIKIADFGM--CKENMLGDAK--TNXFCGTPDYIAPEIL 190
Query: 187 EQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKS 246
Y+ D WSFG+ E+ G +PF ++ + P R K
Sbjct: 191 LG-QKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNP-----FYPRWLEKE 244
Query: 247 FKQMIASCLVKDPSKRPSAK-KLLKHSFFKQARSNE 281
K ++ V++P KR + + +H F++ E
Sbjct: 245 AKDLLVKLFVREPEKRLGVRGDIRQHPLFREINWEE 280
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 126/263 (47%), Gaps = 18/263 (6%)
Query: 10 AEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKIL--DFERDNSDLSNISREAQTMILVD 67
++ Y L E +G G + VH A + + VAVK+L D RD S REAQ ++
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 68 HPNVLKSHCSFVSDHNL----WVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKG 123
HP ++ + + ++ ++VM ++ G + I+ P + + ++ + +
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAI--EVIADACQA 128
Query: 124 LDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAP 183
L++ H +G IHRDVK NI+I A+K+ DFG++ + DSG+ +GT +++P
Sbjct: 129 LNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSP 188
Query: 184 EVMEQLHG--YDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQN--APPGLDYER 239
EQ G D ++D++S G E+ G PF+ P+ V ++ PP +E
Sbjct: 189 ---EQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHE- 244
Query: 240 DRKFSKSFKQMIASCLVKDPSKR 262
S ++ L K+P R
Sbjct: 245 --GLSADLDAVVLKALAKNPENR 265
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 126/261 (48%), Gaps = 14/261 (5%)
Query: 12 HYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDN-SDLSNISREAQTMILVDHPN 70
+Y L + +G+G A V A I VA+KI+D + N + L + RE + M +++HPN
Sbjct: 13 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 72
Query: 71 VLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHH 130
++K ++ L+++M + SGG L A +E + R+++ + Y H
Sbjct: 73 IVKLFEVIETEKTLYLIMEYASGGEVFDYLVAH--GRMKEKEARSKFRQIVSAVQYCHQK 130
Query: 131 GHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLH 190
+HRD+K+ N+L+D IK+ DFG S G +TF G+P + APE+ Q
Sbjct: 131 RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGK----LDTFCGSPPYAAPELF-QGK 185
Query: 191 GYDF-KADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQ 249
YD + D+WS G+ L G PF ++ L+ Y S +
Sbjct: 186 KYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK-----YRIPFYMSTDCEN 240
Query: 250 MIASCLVKDPSKRPSAKKLLK 270
++ LV +P KR + ++++K
Sbjct: 241 LLKRFLVLNPIKRGTLEQIMK 261
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 133/276 (48%), Gaps = 17/276 (6%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKIL--DFERDNSDLSNISREAQTMILV-D 67
E + L++ +G+G V A N+ A+K L D + D+ E + + L +
Sbjct: 18 EDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWE 77
Query: 68 HPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYL 127
HP + C+F + NL+ VM +++GG ++ +++ + F+ E++ GL +L
Sbjct: 78 HPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHK--FDLSRATFYAAEIILGLQFL 135
Query: 128 HHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDS-GDRQRMRNTFVGTPCWMAPEVM 186
H G ++RD+K NIL+D G IK+ DFG+ C + GD + N F GTP ++APE++
Sbjct: 136 HSKGIVYRDLKLDNILLDKDGHIKIADFGM--CKENMLGDAK--TNEFCGTPDYIAPEIL 191
Query: 187 EQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKS 246
Y+ D WSFG+ E+ G +PF ++ + P R K
Sbjct: 192 LG-QKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPF-----YPRWLEKE 245
Query: 247 FKQMIASCLVKDPSKRPSAK-KLLKHSFFKQARSNE 281
K ++ V++P KR + + +H F++ E
Sbjct: 246 AKDLLVKLFVREPEKRLGVRGDIRQHPLFREINWEE 281
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 141/295 (47%), Gaps = 29/295 (9%)
Query: 3 KKKYPIGAEHYTLYEEVGQGVSASVHRALCIPFN-----EIVAVKILDFER-----DNSD 52
KK+ IG ++ + ++G G V LC N I +K F++ DN +
Sbjct: 29 KKEGKIGESYFKV-RKLGSGAYGEV--LLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKN 85
Query: 53 LSN----ISREAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGF 108
+ I E + +DHPN++K F ++V F GG + + F
Sbjct: 86 IEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHK--F 143
Query: 109 EEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGA---IKLGDFGVSACLFDSG 165
+E A I++++L G+ YLH H +HRD+K NIL++ + + IK+ DFG+S+ F
Sbjct: 144 DECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSS-FFSKD 202
Query: 166 DRQRMRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLL 225
+ R R +GT ++APEV+++ Y+ K D+WS G+ L G+ PF + +
Sbjct: 203 YKLRDR---LGTAYYIAPEVLKK--KYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDI-I 256
Query: 226 MTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSFFKQARSN 280
++ D+ + S K++I L D +KR +A++ L + K+ +N
Sbjct: 257 KKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYANN 311
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 125/242 (51%), Gaps = 16/242 (6%)
Query: 40 AVKILDFE--RDNSDLSNISREAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCL 97
AVK++ + +D ++ RE Q + +DHPN++K + F ++V +GG
Sbjct: 61 AVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELF 120
Query: 98 HILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGA---IKLGD 154
+ + F EV A I+R+VL G+ Y+H + +HRD+K N+L++ + I++ D
Sbjct: 121 DEIISR--KRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIID 178
Query: 155 FGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHG-YDFKADIWSFGITALELAHGHA 213
FG+S S ++M++ +GT ++APEV LHG YD K D+WS G+ L G
Sbjct: 179 FGLSTHFEAS---KKMKDK-IGTAYYIAPEV---LHGTYDEKCDVWSTGVILYILLSGCP 231
Query: 214 PFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSF 273
PF+ + L ++ + + +K S+S K +I L PS R SA+ L H +
Sbjct: 232 PFNGANEYDI-LKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEW 290
Query: 274 FK 275
+
Sbjct: 291 IQ 292
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 109/212 (51%), Gaps = 10/212 (4%)
Query: 8 IGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFER--DNSDLSNISREAQTMIL 65
+ +H+ + +G+G V ++ A+K ++ ++ + +++ N+ +E Q M
Sbjct: 12 VNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQG 71
Query: 66 VDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLD 125
++HP ++ SF + ++++V+ + GG + L+ F+E + + E++ LD
Sbjct: 72 LEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNV--HFKEETVKLFICELVMALD 129
Query: 126 YLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEV 185
YL + IHRD+K NIL+D G + + DF ++A L R+ T GT +MAPE+
Sbjct: 130 YLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAML----PRETQITTMAGTKPYMAPEM 185
Query: 186 MEQLH--GYDFKADIWSFGITALELAHGHAPF 215
GY F D WS G+TA EL G P+
Sbjct: 186 FSSRKGAGYSFAVDWWSLGVTAYELLRGRRPY 217
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 140/283 (49%), Gaps = 32/283 (11%)
Query: 8 IGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILD-FERDNSD-LSNISREAQTMIL 65
+ ++ Y + E +G G + R + N AVK++D +RD S+ + + R Q
Sbjct: 24 VFSDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEILLRYGQ---- 79
Query: 66 VDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCL-HILKAAYPDGFEEVVIATILREVLKGL 124
HPN++ + ++++V M GG L IL+ + F E + +L + K +
Sbjct: 80 --HPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKF---FSEREASFVLHTIGKTV 134
Query: 125 DYLHHHGHIHRDVKSGNIL-IDVRG---AIKLGDFGVSACLFDSGDRQRMRNTFVGTPCW 180
+YLH G +HRD+K NIL +D G +++ DFG + L R N + TPC+
Sbjct: 135 EYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQL-------RAENGLLMTPCY 187
Query: 181 ----MAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYP---PMKVLLMTLQNAPP 233
+APEV+++ GYD DIWS GI + G+ PF+ P P ++ L + +
Sbjct: 188 TANFVAPEVLKR-QGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEI-LTRIGSGKF 245
Query: 234 GLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSFFKQ 276
L S++ K +++ L DP +R +AK++L+H + Q
Sbjct: 246 TLSGGNWNTVSETAKDLVSKMLHVDPHQRLTAKQVLQHPWVTQ 288
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 140/283 (49%), Gaps = 32/283 (11%)
Query: 8 IGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILD-FERDNSD-LSNISREAQTMIL 65
+ ++ Y + E +G G + R + N AVK++D +RD S+ + + R Q
Sbjct: 24 VFSDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEILLRYGQ---- 79
Query: 66 VDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCL-HILKAAYPDGFEEVVIATILREVLKGL 124
HPN++ + ++++V M GG L IL+ + F E + +L + K +
Sbjct: 80 --HPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKF---FSEREASFVLHTIGKTV 134
Query: 125 DYLHHHGHIHRDVKSGNIL-IDVRG---AIKLGDFGVSACLFDSGDRQRMRNTFVGTPCW 180
+YLH G +HRD+K NIL +D G +++ DFG + L R N + TPC+
Sbjct: 135 EYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQL-------RAENGLLMTPCY 187
Query: 181 ----MAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYP---PMKVLLMTLQNAPP 233
+APEV+++ GYD DIWS GI + G+ PF+ P P ++ L + +
Sbjct: 188 TANFVAPEVLKR-QGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEI-LTRIGSGKF 245
Query: 234 GLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSFFKQ 276
L S++ K +++ L DP +R +AK++L+H + Q
Sbjct: 246 TLSGGNWNTVSETAKDLVSKMLHVDPHQRLTAKQVLQHPWVTQ 288
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 126/263 (47%), Gaps = 18/263 (6%)
Query: 10 AEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKIL--DFERDNSDLSNISREAQTMILVD 67
++ Y L E +G G + VH A + + VAVK+L D RD S REAQ ++
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 68 HPNVLKSHCSFVSDHNL----WVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKG 123
HP ++ + + ++ ++VM ++ G + I+ P + + ++ + +
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAI--EVIADACQA 128
Query: 124 LDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAP 183
L++ H +G IHRDVK NILI A+K+ DFG++ + DSG+ +GT +++P
Sbjct: 129 LNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSP 188
Query: 184 EVMEQLHG--YDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQN--APPGLDYER 239
EQ G D ++D++S G E+ G PF+ P+ V ++ PP +E
Sbjct: 189 ---EQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHE- 244
Query: 240 DRKFSKSFKQMIASCLVKDPSKR 262
S ++ L K+P R
Sbjct: 245 --GLSADLDAVVLKALAKNPENR 265
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 126/263 (47%), Gaps = 18/263 (6%)
Query: 10 AEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKIL--DFERDNSDLSNISREAQTMILVD 67
++ Y L E +G G + VH A + + VAVK+L D RD S REAQ ++
Sbjct: 28 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 87
Query: 68 HPNVLKSHCSFVSDHNL----WVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKG 123
HP ++ + + ++ ++VM ++ G + I+ P + + ++ + +
Sbjct: 88 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAI--EVIADACQA 145
Query: 124 LDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAP 183
L++ H +G IHRDVK NI+I A+K+ DFG++ + DSG+ +GT +++P
Sbjct: 146 LNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSP 205
Query: 184 EVMEQLHG--YDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQN--APPGLDYER 239
EQ G D ++D++S G E+ G PF+ P+ V ++ PP +E
Sbjct: 206 ---EQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHE- 261
Query: 240 DRKFSKSFKQMIASCLVKDPSKR 262
S ++ L K+P R
Sbjct: 262 --GLSADLDAVVLKALAKNPENR 282
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 129/269 (47%), Gaps = 17/269 (6%)
Query: 12 HYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNS--DLSNISREAQTMILVDHP 69
HY L + +G G V VAVKIL+ ++ S + I RE Q + L HP
Sbjct: 12 HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHP 71
Query: 70 NVLKSHCSFVSDHNLWVVMPFMSGGSCL-HILKAAYPDGFEEVVIATILREVLKGLDYLH 128
+++K + + + ++VM ++SGG +I K EE+ + +++L +DY H
Sbjct: 72 HIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGR---VEEMEARRLFQQILSAVDYCH 128
Query: 129 HHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQ 188
H +HRD+K N+L+D K+ DFG+S + D G+ R T G+P + APEV+
Sbjct: 129 RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD-GEFLR---TSCGSPNYAAPEVISG 184
Query: 189 LHGYDFKADIWSFGITALELAHGHAPF-SKYPPMKVLLMTLQNAPPGLDYERDRKFSKSF 247
+ DIWS G+ L G PF ++ P TL G + ++S
Sbjct: 185 RLYAGPEVDIWSCGVILYALLCGTLPFDDEHVP------TLFKKIRGGVFYIPEYLNRSV 238
Query: 248 KQMIASCLVKDPSKRPSAKKLLKHSFFKQ 276
++ L DP KR + K + +H +FKQ
Sbjct: 239 ATLLMHMLQVDPLKRATIKDIREHEWFKQ 267
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 126/263 (47%), Gaps = 18/263 (6%)
Query: 10 AEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKIL--DFERDNSDLSNISREAQTMILVD 67
++ Y L E +G G + VH A + + VAVK+L D RD S REAQ ++
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 68 HPNVLKSHCSFVSDHNL----WVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKG 123
HP ++ + + ++ ++VM ++ G + I+ P + + ++ + +
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAI--EVIADACQA 128
Query: 124 LDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAP 183
L++ H +G IHRDVK NI+I A+K+ DFG++ + DSG+ +GT +++P
Sbjct: 129 LNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSP 188
Query: 184 EVMEQLHG--YDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQN--APPGLDYER 239
EQ G D ++D++S G E+ G PF+ P+ V ++ PP +E
Sbjct: 189 ---EQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHE- 244
Query: 240 DRKFSKSFKQMIASCLVKDPSKR 262
S ++ L K+P R
Sbjct: 245 --GLSADLDAVVLKALAKNPENR 265
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 130/269 (48%), Gaps = 17/269 (6%)
Query: 12 HYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNS--DLSNISREAQTMILVDHP 69
HY L + +G G V VAVKIL+ ++ S + I RE Q + L HP
Sbjct: 12 HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHP 71
Query: 70 NVLKSHCSFVSDHNLWVVMPFMSGGSCL-HILKAAYPDGFEEVVIATILREVLKGLDYLH 128
+++K + + + ++VM ++SGG +I K EE+ + +++L +DY H
Sbjct: 72 HIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGR---VEEMEARRLFQQILSAVDYCH 128
Query: 129 HHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQ 188
H +HRD+K N+L+D K+ DFG+S + D + +R++ G+P + APEV+
Sbjct: 129 RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG---EFLRDS-CGSPNYAAPEVISG 184
Query: 189 LHGYDFKADIWSFGITALELAHGHAPF-SKYPPMKVLLMTLQNAPPGLDYERDRKFSKSF 247
+ DIWS G+ L G PF ++ P TL G + ++S
Sbjct: 185 RLYAGPEVDIWSCGVILYALLCGTLPFDDEHVP------TLFKKIRGGVFYIPEYLNRSV 238
Query: 248 KQMIASCLVKDPSKRPSAKKLLKHSFFKQ 276
++ L DP KR + K + +H +FKQ
Sbjct: 239 ATLLMHMLQVDPLKRATIKDIREHEWFKQ 267
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 107/206 (51%), Gaps = 9/206 (4%)
Query: 12 HYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDN-SDLSNISREAQTMILVDHPN 70
+Y L + +G+G A V A + VAVKI+D + N + L + RE + M +++HPN
Sbjct: 16 NYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75
Query: 71 VLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHH 130
++K ++ L++VM + SGG L A +E R+++ + Y H
Sbjct: 76 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH--GRMKEKEARAKFRQIVSAVQYCHQK 133
Query: 131 GHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLH 190
+HRD+K+ N+L+D IK+ DFG S F G++ +TF G+P + APE+ Q
Sbjct: 134 YIVHRDLKAENLLLDGDMNIKIADFGFSNE-FTVGNKL---DTFCGSPPYAAPELF-QGK 188
Query: 191 GYDF-KADIWSFGITALELAHGHAPF 215
YD + D+WS G+ L G PF
Sbjct: 189 KYDGPEVDVWSLGVILYTLVSGSLPF 214
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 123/261 (47%), Gaps = 12/261 (4%)
Query: 14 TLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDN-SDLSNISREAQTMILVDHPNVL 72
T+ + +G G +V++ ++ VAVK+L+ L E + H N+L
Sbjct: 15 TVGQRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 71
Query: 73 KSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGH 132
+ + L +V + G S H L A+ FE + I R+ +G+DYLH
Sbjct: 72 -LFMGYSTKPQLAIVTQWCEGSSLYHHLHAS-ETKFEMKKLIDIARQTARGMDYLHAKSI 129
Query: 133 IHRDVKSGNILIDVRGAIKLGDFGVSACLFD-SGDRQRMRNTFVGTPCWMAPEV--MEQL 189
IHRD+KS NI + +K+GDFG++ SG Q G+ WMAPEV M+
Sbjct: 130 IHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQ--FEQLSGSILWMAPEVIRMQDS 187
Query: 190 HGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDR-KFSKSFK 248
+ Y F++D+++FGI EL G P+S ++ + D + R K K
Sbjct: 188 NPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMK 247
Query: 249 QMIASCLVKDPSKRPSAKKLL 269
+++A CL K +RPS ++L
Sbjct: 248 RLMAECLKKKRDERPSFPRIL 268
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 133/276 (48%), Gaps = 32/276 (11%)
Query: 13 YTLYEEVGQGVSASVHRALCIPFNEIVAVKILD-FERD-NSDLSNISREAQTMILVDHPN 70
Y + E++G G + R + N AVKI+D +RD ++ + R Q HPN
Sbjct: 24 YEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEILLRYGQ------HPN 77
Query: 71 VLKSHCSFVSDHNLWVVMPFMSGGSCL-HILKAAYPDGFEEVVIATILREVLKGLDYLHH 129
++ + ++VV M GG L IL+ + F E + +L + K ++YLH
Sbjct: 78 IITLKDVYDDGKYVYVVTELMKGGELLDKILRQKF---FSEREASAVLFTITKTVEYLHA 134
Query: 130 HGHIHRDVKSGNIL-IDVRG---AIKLGDFGVSACLFDSGDRQRMRNTFVGTPCW----M 181
G +HRD+K NIL +D G +I++ DFG + L R N + TPC+ +
Sbjct: 135 QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL-------RAENGLLMTPCYTANFV 187
Query: 182 APEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYP---PMKVLLMTLQNAPPGLDYE 238
APEV+E+ GYD DIWS G+ + G+ PF+ P P ++ L + + L
Sbjct: 188 APEVLER-QGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEI-LARIGSGKFSLSGG 245
Query: 239 RDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSFF 274
S + K +++ L DP +R +A +L+H +
Sbjct: 246 YWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWI 281
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 122/241 (50%), Gaps = 15/241 (6%)
Query: 48 RDNSDLSNISREAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDG 107
+ +D ++ RE Q + +DHPN+ K + F ++V +GG + +
Sbjct: 65 KQKTDKESLLREVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR-- 122
Query: 108 FEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGA---IKLGDFGVSACLFDS 164
F EV A I+R+VL G+ Y H + +HRD+K N+L++ + I++ DFG+S F++
Sbjct: 123 FSEVDAARIIRQVLSGITYXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTH-FEA 181
Query: 165 GDRQRMRNTFVGTPCWMAPEVMEQLHG-YDFKADIWSFGITALELAHGHAPFSKYPPMKV 223
+ + + +GT ++APEV LHG YD K D+WS G+ L G PF+ +
Sbjct: 182 SKKXKDK---IGTAYYIAPEV---LHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDI 235
Query: 224 LLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSFFKQARSNEYI 283
L ++ + + +K S+S K +I L PS R SA+ L H + Q + E I
Sbjct: 236 -LKKVEKGKYTFELPQWKKVSESAKDLIRKXLTYVPSXRISARDALDHEWI-QTYTKEQI 293
Query: 284 A 284
+
Sbjct: 294 S 294
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 108/209 (51%), Gaps = 5/209 (2%)
Query: 10 AEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHP 69
E + L + +G+G + V A+ E VAVKI+D +R NI +E +++H
Sbjct: 5 VEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 70 NVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPD-GFEEVVIATILREVLKGLDYLH 128
NV+K + + ++ + + SGG ++ PD G E +++ G+ YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 129 HHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQ 188
G HRD+K N+L+D R +K+ DFG+ A +F +R+R+ N GT ++APE++++
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGL-ATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 189 LHGYDFKADIWSFGITALELAHGHAPFSK 217
+ D+WS GI + G P+ +
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 126/267 (47%), Gaps = 15/267 (5%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNE---IVAVKILDFERDNSDLSNISR-EAQTMILV 66
E Y +++G+G S +A+ + E +K ++ R +S SR E + +
Sbjct: 24 EKYVRLQKIGEG---SFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANM 80
Query: 67 DHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDY 126
HPN+++ SF + +L++VM + GG + A F+E I ++ L +
Sbjct: 81 KHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKH 140
Query: 127 LHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVM 186
+H +HRD+KS NI + G ++LGDFG++ L + + R +GTP +++PE+
Sbjct: 141 VHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELAR---ACIGTPYYLSPEIC 197
Query: 187 EQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKS 246
E Y+ K+DIW+ G EL F ++L + + P + +S
Sbjct: 198 EN-KPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVSLH----YSYD 252
Query: 247 FKQMIASCLVKDPSKRPSAKKLLKHSF 273
+ +++ ++P RPS +L+ F
Sbjct: 253 LRSLVSQLFKRNPRDRPSVNSILEKGF 279
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 107/209 (51%), Gaps = 5/209 (2%)
Query: 10 AEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHP 69
E + L + +G+G V A+ E VAVKI+D +R NI +E +++H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 70 NVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPD-GFEEVVIATILREVLKGLDYLH 128
NV+K + + ++ + + SGG ++ PD G E +++ G+ YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 129 HHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQ 188
G HRD+K N+L+D R +K+ DFG+ A +F +R+R+ N GT ++APE++++
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGL-ATVFRYNNRERLLNKMXGTLPYVAPELLKR 180
Query: 189 LHGYDFKADIWSFGITALELAHGHAPFSK 217
+ D+WS GI + G P+ +
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 107/209 (51%), Gaps = 5/209 (2%)
Query: 10 AEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHP 69
E + L + +G+G V A+ E VAVKI+D +R NI +E +++H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 65
Query: 70 NVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPD-GFEEVVIATILREVLKGLDYLH 128
NV+K + + ++ + + SGG ++ PD G E +++ G+ YLH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 129 HHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQ 188
G HRD+K N+L+D R +K+ DFG+ A +F +R+R+ N GT ++APE++++
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGL-ATVFRYNNRERLLNKMXGTLPYVAPELLKR 181
Query: 189 LHGYDFKADIWSFGITALELAHGHAPFSK 217
+ D+WS GI + G P+ +
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 107/209 (51%), Gaps = 5/209 (2%)
Query: 10 AEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHP 69
E + L + +G+G V A+ E VAVKI+D +R NI +E +++H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 70 NVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPD-GFEEVVIATILREVLKGLDYLH 128
NV+K + + ++ + + SGG ++ PD G E +++ G+ YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 129 HHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQ 188
G HRD+K N+L+D R +K+ DFG+ A +F +R+R+ N GT ++APE++++
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGL-ATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 189 LHGYDFKADIWSFGITALELAHGHAPFSK 217
+ D+WS GI + G P+ +
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 134/268 (50%), Gaps = 11/268 (4%)
Query: 13 YTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNS-DLSNISREAQTMILVDHPNV 71
Y L+EE+G+G + V R + + A KI++ ++ ++ D + REA+ L+ HPN+
Sbjct: 33 YQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNI 92
Query: 72 LKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHG 131
++ H S + ++V ++GG + A + + E + + ++L+ ++++H H
Sbjct: 93 VRLHDSISEEGFHYLVFDLVTGGELFEDIVAR--EYYSEADASHCIHQILESVNHIHQHD 150
Query: 132 HIHRDVKSGNILIDVR---GAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQ 188
+HRD+K N+L+ + A+KL DFG++ + Q+ F GTP +++PEV+ +
Sbjct: 151 IVHRDLKPENLLLASKCKGAAVKLADFGLA---IEVQGEQQAWFGFAGTPGYLSPEVLRK 207
Query: 189 LHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFK 248
Y DIW+ G+ L G+ PF K+ A E D + K
Sbjct: 208 -DPYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWD-TVTPEAK 265
Query: 249 QMIASCLVKDPSKRPSAKKLLKHSFFKQ 276
+I L +P+KR +A + LKH + Q
Sbjct: 266 NLINQMLTINPAKRITADQALKHPWVCQ 293
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 129/270 (47%), Gaps = 19/270 (7%)
Query: 12 HYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNS--DLSNISREAQTMILVDHP 69
HY L + +G G V VAVKIL+ ++ S + I RE Q + L HP
Sbjct: 17 HYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHP 76
Query: 70 NVLKSHCSFVSDHNLWVVMPFMSGGSCL-HILKAAYPDGFEEVVIATILREVLKGLDYLH 128
+++K + + ++++VM ++SGG +I K D E + +++L G+DY H
Sbjct: 77 HIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKES---RRLFQQILSGVDYCH 133
Query: 129 HHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQ 188
H +HRD+K N+L+D K+ DFG+S + D + +R + G+P + APEV+
Sbjct: 134 RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMM---SDGEFLRXS-CGSPNYAAPEVISG 189
Query: 189 LHGYDFKADIWSFGITALELAHGHAPF--SKYPPMKVLLMTLQNAPPGLDYERDRKFSKS 246
+ DIWS G+ L G PF P + + G+ Y + + S
Sbjct: 190 RLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTL------FKKICDGIFYT-PQYLNPS 242
Query: 247 FKQMIASCLVKDPSKRPSAKKLLKHSFFKQ 276
++ L DP KR + K + +H +FKQ
Sbjct: 243 VISLLKHMLQVDPMKRATIKDIREHEWFKQ 272
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 126/261 (48%), Gaps = 14/261 (5%)
Query: 12 HYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDN-SDLSNISREAQTMILVDHPN 70
+Y L + +G+G A V A I VA+KI+D + N + L + RE + M +++HPN
Sbjct: 16 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75
Query: 71 VLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHH 130
++K ++ L+++M + SGG L A +E + R+++ + Y H
Sbjct: 76 IVKLFEVIETEKTLYLIMEYASGGEVFDYLVAH--GRMKEKEARSKFRQIVSAVQYCHQK 133
Query: 131 GHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLH 190
+HRD+K+ N+L+D IK+ DFG S F G + + F G P + APE+ Q
Sbjct: 134 RIVHRDLKAENLLLDADMNIKIADFGFSNE-FTVGGKL---DAFCGAPPYAAPELF-QGK 188
Query: 191 GYDF-KADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQ 249
YD + D+WS G+ L G PF ++ L+ Y S +
Sbjct: 189 KYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK-----YRIPFYMSTDCEN 243
Query: 250 MIASCLVKDPSKRPSAKKLLK 270
++ LV +P KR + ++++K
Sbjct: 244 LLKRFLVLNPIKRGTLEQIMK 264
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 124/265 (46%), Gaps = 20/265 (7%)
Query: 14 TLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDN-SDLSNISREAQTMILVDHPNVL 72
T+ + +G G +V++ ++ VAVK+L+ L E + H N+L
Sbjct: 27 TVGQRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 83
Query: 73 KSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGH 132
+ + L +V + G S H L A+ FE + I R+ +G+DYLH
Sbjct: 84 -LFMGYSTKPQLAIVTQWCEGSSLYHHLHASETK-FEMKKLIDIARQTARGMDYLHAKSI 141
Query: 133 IHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNT-----FVGTPCWMAPEV-- 185
IHRD+KS NI + +K+GDFG++ ++ R + G+ WMAPEV
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFGLAT------EKSRWSGSHQFEQLSGSILWMAPEVIR 195
Query: 186 MEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDR-KFS 244
M+ + Y F++D+++FGI EL G P+S ++ + D + R
Sbjct: 196 MQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCP 255
Query: 245 KSFKQMIASCLVKDPSKRPSAKKLL 269
K K+++A CL K +RPS ++L
Sbjct: 256 KRMKRLMAECLKKKRDERPSFPRIL 280
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 107/209 (51%), Gaps = 5/209 (2%)
Query: 10 AEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHP 69
E + L + +G+G V A+ E VAVKI+D +R NI +E +++H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 70 NVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPD-GFEEVVIATILREVLKGLDYLH 128
NV+K + + ++ + + SGG ++ PD G E +++ G+ YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 129 HHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQ 188
G HRD+K N+L+D R +K+ DFG+ A +F +R+R+ N GT ++APE++++
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGL-ATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 189 LHGYDFKADIWSFGITALELAHGHAPFSK 217
+ D+WS GI + G P+ +
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 107/209 (51%), Gaps = 5/209 (2%)
Query: 10 AEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHP 69
E + L + +G+G V A+ E VAVKI+D +R NI +E +++H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 70 NVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPD-GFEEVVIATILREVLKGLDYLH 128
NV+K + + ++ + + SGG ++ PD G E +++ G+ YLH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 129 HHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQ 188
G HRD+K N+L+D R +K+ DFG+ A +F +R+R+ N GT ++APE++++
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGL-ATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 189 LHGYDFKADIWSFGITALELAHGHAPFSK 217
+ D+WS GI + G P+ +
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 107/209 (51%), Gaps = 5/209 (2%)
Query: 10 AEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHP 69
E + L + +G+G V A+ E VAVKI+D +R NI +E +++H
Sbjct: 4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 63
Query: 70 NVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPD-GFEEVVIATILREVLKGLDYLH 128
NV+K + + ++ + + SGG ++ PD G E +++ G+ YLH
Sbjct: 64 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLH 120
Query: 129 HHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQ 188
G HRD+K N+L+D R +K+ DFG+ A +F +R+R+ N GT ++APE++++
Sbjct: 121 GIGITHRDIKPENLLLDERDNLKISDFGL-ATVFRYNNRERLLNKMCGTLPYVAPELLKR 179
Query: 189 LHGYDFKADIWSFGITALELAHGHAPFSK 217
+ D+WS GI + G P+ +
Sbjct: 180 REFHAEPVDVWSCGIVLTAMLAGELPWDQ 208
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 107/209 (51%), Gaps = 5/209 (2%)
Query: 10 AEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHP 69
E + L + +G+G V A+ E VAVKI+D +R NI +E +++H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 70 NVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPD-GFEEVVIATILREVLKGLDYLH 128
NV+K + + ++ + + SGG ++ PD G E +++ G+ YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 129 HHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQ 188
G HRD+K N+L+D R +K+ DFG+ A +F +R+R+ N GT ++APE++++
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGL-ATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 189 LHGYDFKADIWSFGITALELAHGHAPFSK 217
+ D+WS GI + G P+ +
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 107/209 (51%), Gaps = 5/209 (2%)
Query: 10 AEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHP 69
E + L + +G+G V A+ E VAVKI+D +R NI +E +++H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 70 NVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPD-GFEEVVIATILREVLKGLDYLH 128
NV+K + + ++ + + SGG ++ PD G E +++ G+ YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 129 HHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQ 188
G HRD+K N+L+D R +K+ DFG+ A +F +R+R+ N GT ++APE++++
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGL-ATVFRYNNRERLLNKMXGTLPYVAPELLKR 180
Query: 189 LHGYDFKADIWSFGITALELAHGHAPFSK 217
+ D+WS GI + G P+ +
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 113/218 (51%), Gaps = 9/218 (4%)
Query: 4 KKYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILD-FER-DNSDLSNISREAQ 61
K+ + E + + + +G+G V +++ A+KIL+ +E ++ + E
Sbjct: 67 KQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERD 126
Query: 62 TMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVL 121
++ D + H +F D+NL++VM + GG L +L + + D E + L E++
Sbjct: 127 VLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLL-SKFEDRLPEEMARFYLAEMV 185
Query: 122 KGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWM 181
+D +H ++HRD+K NIL+D+ G I+L DFG L + G Q + VGTP ++
Sbjct: 186 IAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQ--SSVAVGTPDYI 243
Query: 182 APEVMEQLHG----YDFKADIWSFGITALELAHGHAPF 215
+PE+++ + G Y + D WS G+ E+ +G PF
Sbjct: 244 SPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPF 281
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 107/209 (51%), Gaps = 5/209 (2%)
Query: 10 AEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHP 69
E + L + +G+G V A+ E VAVKI+D +R NI +E +++H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHE 65
Query: 70 NVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPD-GFEEVVIATILREVLKGLDYLH 128
NV+K + + ++ + + SGG ++ PD G E +++ G+ YLH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 129 HHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQ 188
G HRD+K N+L+D R +K+ DFG+ A +F +R+R+ N GT ++APE++++
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGL-ATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 189 LHGYDFKADIWSFGITALELAHGHAPFSK 217
+ D+WS GI + G P+ +
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 107/209 (51%), Gaps = 5/209 (2%)
Query: 10 AEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHP 69
E + L + +G+G V A+ E VAVKI+D +R NI +E +++H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 70 NVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPD-GFEEVVIATILREVLKGLDYLH 128
NV+K + + ++ + + SGG ++ PD G E +++ G+ YLH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 129 HHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQ 188
G HRD+K N+L+D R +K+ DFG+ A +F +R+R+ N GT ++APE++++
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGL-ATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 189 LHGYDFKADIWSFGITALELAHGHAPFSK 217
+ D+WS GI + G P+ +
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 107/209 (51%), Gaps = 5/209 (2%)
Query: 10 AEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHP 69
E + L + +G+G V A+ E VAVKI+D +R NI +E +++H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 70 NVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPD-GFEEVVIATILREVLKGLDYLH 128
NV+K + + ++ + + SGG ++ PD G E +++ G+ YLH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 129 HHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQ 188
G HRD+K N+L+D R +K+ DFG+ A +F +R+R+ N GT ++APE++++
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGL-ATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 189 LHGYDFKADIWSFGITALELAHGHAPFSK 217
+ D+WS GI + G P+ +
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 107/209 (51%), Gaps = 5/209 (2%)
Query: 10 AEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHP 69
E + L + +G+G V A+ E VAVKI+D +R NI +E +++H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 70 NVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPD-GFEEVVIATILREVLKGLDYLH 128
NV+K + + ++ + + SGG ++ PD G E +++ G+ YLH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 129 HHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQ 188
G HRD+K N+L+D R +K+ DFG+ A +F +R+R+ N GT ++APE++++
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGL-ATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 189 LHGYDFKADIWSFGITALELAHGHAPFSK 217
+ D+WS GI + G P+ +
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 107/209 (51%), Gaps = 5/209 (2%)
Query: 10 AEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHP 69
E + L + +G+G V A+ E VAVKI+D +R NI +E +++H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 70 NVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPD-GFEEVVIATILREVLKGLDYLH 128
NV+K + + ++ + + SGG ++ PD G E +++ G+ YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 129 HHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQ 188
G HRD+K N+L+D R +K+ DFG+ A +F +R+R+ N GT ++APE++++
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGL-ATVFRYNNRERLLNKMXGTLPYVAPELLKR 180
Query: 189 LHGYDFKADIWSFGITALELAHGHAPFSK 217
+ D+WS GI + G P+ +
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 107/209 (51%), Gaps = 5/209 (2%)
Query: 10 AEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHP 69
E + L + +G+G V A+ E VAVKI+D +R NI +E +++H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 70 NVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPD-GFEEVVIATILREVLKGLDYLH 128
NV+K + + ++ + + SGG ++ PD G E +++ G+ YLH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 129 HHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQ 188
G HRD+K N+L+D R +K+ DFG+ A +F +R+R+ N GT ++APE++++
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGL-ATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 189 LHGYDFKADIWSFGITALELAHGHAPFSK 217
+ D+WS GI + G P+ +
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 125/263 (47%), Gaps = 18/263 (6%)
Query: 10 AEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKIL--DFERDNSDLSNISREAQTMILVD 67
++ Y L E +G G + VH A + + VAVK+L D RD S REAQ ++
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 68 HPNVLKSHCSFVSDHNL----WVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKG 123
HP ++ + + ++ ++VM ++ G + I+ P + + ++ + +
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAI--EVIADACQA 128
Query: 124 LDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAP 183
L++ H +G IHRDVK NI+I A+K+ DFG++ + DSG+ +GT +++P
Sbjct: 129 LNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSP 188
Query: 184 EVMEQLHG--YDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQN--APPGLDYER 239
EQ G D ++D++S G E+ G PF+ P V ++ PP +E
Sbjct: 189 ---EQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQHVREDPIPPSARHE- 244
Query: 240 DRKFSKSFKQMIASCLVKDPSKR 262
S ++ L K+P R
Sbjct: 245 --GLSADLDAVVLKALAKNPENR 265
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 124/265 (46%), Gaps = 20/265 (7%)
Query: 14 TLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDN-SDLSNISREAQTMILVDHPNVL 72
T+ + +G G +V++ ++ VAVK+L+ L E + H N+L
Sbjct: 27 TVGQRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 83
Query: 73 KSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGH 132
+ + L +V + G S H L A+ FE + I R+ +G+DYLH
Sbjct: 84 -LFMGYSTAPQLAIVTQWCEGSSLYHHLHASETK-FEMKKLIDIARQTARGMDYLHAKSI 141
Query: 133 IHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNT-----FVGTPCWMAPEV-- 185
IHRD+KS NI + +K+GDFG++ ++ R + G+ WMAPEV
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFGLAT------EKSRWSGSHQFEQLSGSILWMAPEVIR 195
Query: 186 MEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDR-KFS 244
M+ + Y F++D+++FGI EL G P+S ++ + D + R
Sbjct: 196 MQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCP 255
Query: 245 KSFKQMIASCLVKDPSKRPSAKKLL 269
K K+++A CL K +RPS ++L
Sbjct: 256 KRMKRLMAECLKKKRDERPSFPRIL 280
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 107/209 (51%), Gaps = 5/209 (2%)
Query: 10 AEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHP 69
E + L + +G+G V A+ E VAVKI+D +R NI +E +++H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 70 NVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPD-GFEEVVIATILREVLKGLDYLH 128
NV+K + + ++ + + SGG ++ PD G E +++ G+ YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 129 HHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQ 188
G HRD+K N+L+D R +K+ DFG+ A +F +R+R+ N GT ++APE++++
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGL-ATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 189 LHGYDFKADIWSFGITALELAHGHAPFSK 217
+ D+WS GI + G P+ +
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 107/209 (51%), Gaps = 5/209 (2%)
Query: 10 AEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHP 69
E + L + +G+G V A+ E VAVKI+D +R NI +E +++H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 70 NVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPD-GFEEVVIATILREVLKGLDYLH 128
NV+K + + ++ + + SGG ++ PD G E +++ G+ YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 129 HHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQ 188
G HRD+K N+L+D R +K+ DFG+ A +F +R+R+ N GT ++APE++++
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGL-ATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 189 LHGYDFKADIWSFGITALELAHGHAPFSK 217
+ D+WS GI + G P+ +
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 107/209 (51%), Gaps = 5/209 (2%)
Query: 10 AEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHP 69
E + L + +G+G V A+ E VAVKI+D +R NI +E +++H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 70 NVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPD-GFEEVVIATILREVLKGLDYLH 128
NV+K + + ++ + + SGG ++ PD G E +++ G+ YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 129 HHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQ 188
G HRD+K N+L+D R +K+ DFG+ A +F +R+R+ N GT ++APE++++
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGL-ATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 189 LHGYDFKADIWSFGITALELAHGHAPFSK 217
+ D+WS GI + G P+ +
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 107/209 (51%), Gaps = 5/209 (2%)
Query: 10 AEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHP 69
E + L + +G+G V A+ E VAVKI+D +R NI +E +++H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 70 NVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPD-GFEEVVIATILREVLKGLDYLH 128
NV+K + + ++ + + SGG ++ PD G E +++ G+ YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 129 HHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQ 188
G HRD+K N+L+D R +K+ DFG+ A +F +R+R+ N GT ++APE++++
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGL-ATVFRYNNRERLLNKMXGTLPYVAPELLKR 180
Query: 189 LHGYDFKADIWSFGITALELAHGHAPFSK 217
+ D+WS GI + G P+ +
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 127/266 (47%), Gaps = 10/266 (3%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPN 70
+HY ++EE+G G VHR A K + SD + +E QTM ++ HP
Sbjct: 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFV-MTPHESDKETVRKEIQTMSVLRHPT 215
Query: 71 VLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHH 130
++ H +F D+ + ++ FMSGG + + E+ + +R+V KGL ++H +
Sbjct: 216 LVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVE-YMRQVCKGLCHMHEN 274
Query: 131 GHIHRDVKSGNILIDVRGA--IKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQ 188
++H D+K NI+ + + +KL DFG++A L D ++ GT + APEV E
Sbjct: 275 NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHL----DPKQSVKVTTGTAEFAAPEVAEG 330
Query: 189 LHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFK 248
+ D+WS G+ + L G +PF + L +++ +D S+ K
Sbjct: 331 -KPVGYYTDMWSVGVLSYILLSGLSPFGGENDDET-LRNVKSCDWNMDDSAFSGISEDGK 388
Query: 249 QMIASCLVKDPSKRPSAKKLLKHSFF 274
I L+ DP+ R + + L+H +
Sbjct: 389 DFIRKLLLADPNTRMTIHQALEHPWL 414
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 140/295 (47%), Gaps = 30/295 (10%)
Query: 7 PIGA-EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDL-SNISREAQTMI 64
P+G+ E++ E++G+G V++A E+VA+K + + + + S RE +
Sbjct: 1 PLGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 60
Query: 65 LVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGL 124
++HPN++K +++ L++V F+S + A+ G +I + L ++L+GL
Sbjct: 61 ELNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKKFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 125 DYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPE 184
+ H H +HRD+K N+LI+ GAIKL DFG++ G R V T + APE
Sbjct: 120 AFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPE 176
Query: 185 VMEQLHGYDFKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTL----QNAPPGLDY 237
++ Y DIWS G E+ A F S+ + + TL + PG+
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS 236
Query: 238 ERDRK----------FSKSF-------KQMIASCLVKDPSKRPSAKKLLKHSFFK 275
D K FSK + +++ L DP+KR SAK L H FF+
Sbjct: 237 MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 107/209 (51%), Gaps = 5/209 (2%)
Query: 10 AEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHP 69
E + L + +G+G V A+ E VAVKI+D +R NI +E +++H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 70 NVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPD-GFEEVVIATILREVLKGLDYLH 128
NV+K + + ++ + + SGG ++ PD G E +++ G+ YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 129 HHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQ 188
G HRD+K N+L+D R +K+ DFG+ A +F +R+R+ N GT ++APE++++
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGL-ATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 189 LHGYDFKADIWSFGITALELAHGHAPFSK 217
+ D+WS GI + G P+ +
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 129/267 (48%), Gaps = 12/267 (4%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPN 70
+HY ++EE+G G VHR A K + SD + +E QTM ++ HP
Sbjct: 51 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFV-MTPHESDKETVRKEIQTMSVLRHPT 109
Query: 71 VLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHH 130
++ H +F D+ + ++ FMSGG + + E+ + +R+V KGL ++H +
Sbjct: 110 LVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVE-YMRQVCKGLCHMHEN 168
Query: 131 GHIHRDVKSGNILIDVRGA--IKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVME- 187
++H D+K NI+ + + +KL DFG++A L D ++ GT + APEV E
Sbjct: 169 NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHL----DPKQSVKVTTGTAEFAAPEVAEG 224
Query: 188 QLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSF 247
+ GY D+WS G+ + L G +PF + L +++ +D S+
Sbjct: 225 KPVGY--YTDMWSVGVLSYILLSGLSPFGGENDDET-LRNVKSCDWNMDDSAFSGISEDG 281
Query: 248 KQMIASCLVKDPSKRPSAKKLLKHSFF 274
K I L+ DP+ R + + L+H +
Sbjct: 282 KDFIRKLLLADPNTRMTIHQALEHPWL 308
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 107/209 (51%), Gaps = 5/209 (2%)
Query: 10 AEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHP 69
E + L + +G+G V A+ E VAVKI+D +R NI +E +++H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 70 NVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPD-GFEEVVIATILREVLKGLDYLH 128
NV+K + + ++ + + SGG ++ PD G E +++ G+ YLH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 129 HHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQ 188
G HRD+K N+L+D R +K+ DFG+ A +F +R+R+ N GT ++APE++++
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGL-ATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 189 LHGYDFKADIWSFGITALELAHGHAPFSK 217
+ D+WS GI + G P+ +
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 140/295 (47%), Gaps = 30/295 (10%)
Query: 7 PIGA-EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDL-SNISREAQTMI 64
P+G+ E++ E++G+G V++A E+VA+K + + + + S RE +
Sbjct: 1 PLGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 60
Query: 65 LVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGL 124
++HPN++K +++ L++V F+S + A+ G +I + L ++L+GL
Sbjct: 61 ELNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 125 DYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPE 184
+ H H +HRD+K N+LI+ GAIKL DFG++ G R V T + APE
Sbjct: 120 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPE 176
Query: 185 VMEQLHGYDFKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTL----QNAPPGLDY 237
++ Y DIWS G E+ A F S+ + + TL + PG+
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS 236
Query: 238 ERDRK----------FSKSF-------KQMIASCLVKDPSKRPSAKKLLKHSFFK 275
D K FSK + +++ L DP+KR SAK L H FF+
Sbjct: 237 MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 134/266 (50%), Gaps = 11/266 (4%)
Query: 13 YTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNS-DLSNISREAQTMILVDHPNV 71
Y L+EE+G+G + V R + + + A KI++ ++ ++ D + REA+ L+ HPN+
Sbjct: 24 YQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNI 83
Query: 72 LKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHG 131
++ H S + + +++ ++GG + A + + E + ++++L+ + + H G
Sbjct: 84 VRLHDSISEEGHHYLIFDLVTGGELFEDIVAR--EYYSEADASHCIQQILEAVLHCHQMG 141
Query: 132 HIHRDVKSGNILIDVR---GAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQ 188
+HRD+K N+L+ + A+KL DFG++ + Q+ F GTP +++PEV+ +
Sbjct: 142 VVHRDLKPENLLLASKLKGAAVKLADFGLA---IEVEGEQQAWFGFAGTPGYLSPEVLRK 198
Query: 189 LHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFK 248
Y D+W+ G+ L G+ PF ++ A E D + K
Sbjct: 199 -DPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWD-TVTPEAK 256
Query: 249 QMIASCLVKDPSKRPSAKKLLKHSFF 274
+I L +PSKR +A + LKH +
Sbjct: 257 DLINKMLTINPSKRITAAEALKHPWI 282
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 135/270 (50%), Gaps = 11/270 (4%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNS-DLSNISREAQTMILVDHP 69
+ Y LYE++G+G + V R + + A KI++ ++ ++ D + REA+ L+ H
Sbjct: 4 DEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHS 63
Query: 70 NVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHH 129
N+++ H S + ++V ++GG + A + + E + ++++L+ + + H
Sbjct: 64 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAR--EYYSEADASHCIQQILEAVLHCHQ 121
Query: 130 HGHIHRDVKSGNILIDVR---GAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVM 186
G +HRD+K N+L+ + A+KL DFG++ + GD+Q F GTP +++PEV+
Sbjct: 122 MGVVHRDLKPENLLLASKCKGAAVKLADFGLA--IEVQGDQQAWFG-FAGTPGYLSPEVL 178
Query: 187 EQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKS 246
+ Y DIW+ G+ L G+ PF K+ A E D +
Sbjct: 179 RK-EAYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWD-TVTPE 236
Query: 247 FKQMIASCLVKDPSKRPSAKKLLKHSFFKQ 276
K +I L +P+KR +A + LKH + Q
Sbjct: 237 AKNLINQMLTINPAKRITAHEALKHPWVCQ 266
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 136/292 (46%), Gaps = 29/292 (9%)
Query: 9 GAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDL-SNISREAQTMILVD 67
G E++ E++G+G V++A E+VA+K + + + + S RE + ++
Sbjct: 1 GMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 68 HPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYL 127
HPN++K +++ L++V F+ + A+ G +I + L ++L+GL +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 128 HHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVME 187
H H +HRD+K N+LI+ GAIKL DFG++ G R V T + APE++
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYTHEVVTLWYRAPEILL 176
Query: 188 QLHGYDFKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTL----QNAPPGLDYERD 240
Y DIWS G E+ A F S+ + + TL + PG+ D
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 236
Query: 241 RK----------FSKSF-------KQMIASCLVKDPSKRPSAKKLLKHSFFK 275
K FSK + +++ L DP+KR SAK L H FF+
Sbjct: 237 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 105/209 (50%), Gaps = 11/209 (5%)
Query: 66 VDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLD 125
+D+P+V+ H F D ++VV+ S L + K E +R+ ++G+
Sbjct: 99 LDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRR--KAVTEPEARYFMRQTIQGVQ 156
Query: 126 YLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEV 185
YLH++ IHRD+K GN+ ++ +K+GDFG++ + G+R++ T GTP ++APEV
Sbjct: 157 YLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKK---TLCGTPNYIAPEV 213
Query: 186 MEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSK 245
+ + G+ F+ DIWS G L G PF + + +N +Y R +
Sbjct: 214 LCK-KGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKN-----EYSVPRHINP 267
Query: 246 SFKQMIASCLVKDPSKRPSAKKLLKHSFF 274
+I L DP+ RPS +LL FF
Sbjct: 268 VASALIRRMLHADPTLRPSVAELLTDEFF 296
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 137/281 (48%), Gaps = 25/281 (8%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREA---QTMIL-- 65
+HY + EE+G G A V + + A K + R +S +SRE + IL
Sbjct: 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 64
Query: 66 VDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLD 125
+ HPN++ H F + ++ +++ +SGG L A + E L+++L G+
Sbjct: 65 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFL--AEKESLTEDEATQFLKQILDGVH 122
Query: 126 YLHHHGHIHRDVKSGNILIDVRGA----IKLGDFGVSACLFDSGDRQRMRNTFVGTPCWM 181
YLH H D+K NI++ + IKL DFG++ + ++G+ +N F GTP ++
Sbjct: 123 YLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI-EAGNE--FKNIF-GTPEFV 178
Query: 182 APEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDR 241
APE++ +AD+WS G+ L G +PF + TL N ++Y+ D
Sbjct: 179 APEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGETKQE----TLTNIS-AVNYDFDE 232
Query: 242 KF----SKSFKQMIASCLVKDPSKRPSAKKLLKHSFFKQAR 278
++ S+ K I LVKDP +R + + L+HS+ K R
Sbjct: 233 EYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIR 273
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 123/268 (45%), Gaps = 22/268 (8%)
Query: 18 EVGQGVSASVHRALCIPFNEIVAVK----ILDFERDNSDLSNISREAQTMILVDHPNVLK 73
E+G+G V + +P +I AVK ++ + L ++ +T VD P +
Sbjct: 41 ELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRT---VDCPFTVT 97
Query: 74 SHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDG--FEEVVIATILREVLKGLDYLHHH- 130
+ + + ++W+ + S K G E ++ I ++K L++LH
Sbjct: 98 FYGALFREGDVWICXE-LXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL 156
Query: 131 GHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVME--- 187
IHRDVK N+LI+ G +K DFG+S L D ++ G + APE +
Sbjct: 157 SVIHRDVKPSNVLINALGQVKXCDFGISGYLVDD----VAKDIDAGCKPYXAPERINPEL 212
Query: 188 QLHGYDFKADIWSFGITALELAHGHAPFSKY-PPMKVLLMTLQNAPPGLDYERDRKFSKS 246
GY K+DIWS GIT +ELA P+ + P + L ++ P L + KFS
Sbjct: 213 NQKGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPAD---KFSAE 269
Query: 247 FKQMIASCLVKDPSKRPSAKKLLKHSFF 274
F + CL K+ +RP+ +L +H FF
Sbjct: 270 FVDFTSQCLKKNSKERPTYPELXQHPFF 297
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 131/276 (47%), Gaps = 32/276 (11%)
Query: 13 YTLYEEVGQGVSASVHRALCIPFNEIVAVKILD-FERD-NSDLSNISREAQTMILVDHPN 70
Y + E++G G + R + N AVKI+D +RD ++ + R Q HPN
Sbjct: 24 YEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPTEEIEILLRYGQ------HPN 77
Query: 71 VLKSHCSFVSDHNLWVVMPFMSGGSCL-HILKAAYPDGFEEVVIATILREVLKGLDYLHH 129
++ + ++VV GG L IL+ + F E + +L + K ++YLH
Sbjct: 78 IITLKDVYDDGKYVYVVTELXKGGELLDKILRQKF---FSEREASAVLFTITKTVEYLHA 134
Query: 130 HGHIHRDVKSGNIL-IDVRG---AIKLGDFGVSACLFDSGDRQRMRNTFVGTPCW----M 181
G +HRD+K NIL +D G +I++ DFG + L R N + TPC+ +
Sbjct: 135 QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL-------RAENGLLXTPCYTANFV 187
Query: 182 APEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYP---PMKVLLMTLQNAPPGLDYE 238
APEV+E+ GYD DIWS G+ G+ PF+ P P ++ L + + L
Sbjct: 188 APEVLER-QGYDAACDIWSLGVLLYTXLTGYTPFANGPDDTPEEI-LARIGSGKFSLSGG 245
Query: 239 RDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSFF 274
S + K +++ L DP +R +A +L+H +
Sbjct: 246 YWNSVSDTAKDLVSKXLHVDPHQRLTAALVLRHPWI 281
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 137/279 (49%), Gaps = 25/279 (8%)
Query: 11 EHYTLYEEVGQG----VSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILV 66
++YTL +G+G V +V + I A KI + + D+ +E + M +
Sbjct: 26 QYYTLENTIGRGSWGEVKIAVQKGTRI---RRAAKKIPKYFVE--DVDRFKQEIEIMKSL 80
Query: 67 DHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDY 126
DHPN+++ + +F + ++++VM +GG + + F E A I+++VL + Y
Sbjct: 81 DHPNIIRLYETFEDNTDIYLVMELCTGGELFE--RVVHKRVFRESDAARIMKDVLSAVAY 138
Query: 127 LHHHGHIHRDVKSGNILI---DVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAP 183
H HRD+K N L +KL DFG++A F G +M T VGTP +++P
Sbjct: 139 CHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAA-RFKPG---KMMRTKVGTPYYVSP 194
Query: 184 EVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQN--APPGLDYERDR 241
+V+E L+G + D WS G+ L G+ PFS +V+L + P D+
Sbjct: 195 QVLEGLYGPE--CDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDW---L 249
Query: 242 KFSKSFKQMIASCLVKDPSKRPSAKKLLKHSFFKQARSN 280
S + +I L K P +R ++ + L+H +F++ S+
Sbjct: 250 NVSPQAESLIRRLLTKSPKQRITSLQALEHEWFEKQLSS 288
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 137/279 (49%), Gaps = 25/279 (8%)
Query: 11 EHYTLYEEVGQG----VSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILV 66
++YTL +G+G V +V + I A KI + + D+ +E + M +
Sbjct: 9 QYYTLENTIGRGSWGEVKIAVQKGTRI---RRAAKKIPKYFVE--DVDRFKQEIEIMKSL 63
Query: 67 DHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDY 126
DHPN+++ + +F + ++++VM +GG + + F E A I+++VL + Y
Sbjct: 64 DHPNIIRLYETFEDNTDIYLVMELCTGGELFE--RVVHKRVFRESDAARIMKDVLSAVAY 121
Query: 127 LHHHGHIHRDVKSGNILI---DVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAP 183
H HRD+K N L +KL DFG++A F G +M T VGTP +++P
Sbjct: 122 CHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAA-RFKPG---KMMRTKVGTPYYVSP 177
Query: 184 EVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQN--APPGLDYERDR 241
+V+E L+G + D WS G+ L G+ PFS +V+L + P D+
Sbjct: 178 QVLEGLYGPE--CDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDW---L 232
Query: 242 KFSKSFKQMIASCLVKDPSKRPSAKKLLKHSFFKQARSN 280
S + +I L K P +R ++ + L+H +F++ S+
Sbjct: 233 NVSPQAESLIRRLLTKSPKQRITSLQALEHEWFEKQLSS 271
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 155/342 (45%), Gaps = 40/342 (11%)
Query: 8 IGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKIL--DFERDNSDLSNISREAQTMIL 65
+G +++ +G+G V A ++ AVK+L D + D+ E + + L
Sbjct: 20 LGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSL 79
Query: 66 V-DHPNVLKSHCSFVSDHNLWVVMPFMSGGSCL-HILKAAYPDGFEEVVIATILREVLKG 123
+HP + + C F + L+ VM F++GG + HI K+ F+E E++
Sbjct: 80 ARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRR---FDEARARFYAAEIISA 136
Query: 124 LDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAP 183
L +LH G I+RD+K N+L+D G KL DFG+ +G TF GTP ++AP
Sbjct: 137 LMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNG---VTTATFCGTPDYIAP 193
Query: 184 EVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQN--APPGLDYERDR 241
E+++++ Y D W+ G+ E+ GHAPF + L + P +E
Sbjct: 194 EILQEML-YGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPTWLHEDAT 252
Query: 242 KFSKSFKQMIASCLVKDPSKRPSA------KKLLKHSFFKQARSNEYIARTLLEGLPALG 295
KSF + K+P+ R + +L+H FFK+ + R + P
Sbjct: 253 GILKSF-------MTKNPTMRLGSLTQGGEHAILRHPFFKEIDWAQLNHRQI---EPPFR 302
Query: 296 DRIKALKK---------KEEDMLAQKKMPDGQKEEISQNEYK 328
RIK+ + KEE +L + +G I+Q+E++
Sbjct: 303 PRIKSREDVSNFDPDFIKEEPVLX--PIDEGHLPMINQDEFR 342
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 136/290 (46%), Gaps = 29/290 (10%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDL-SNISREAQTMILVDHP 69
E++ E++G+G V++A E+VA+K + + + + S RE + ++HP
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 70 NVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHH 129
N++K +++ L++V F+S + A+ G +I + L ++L+GL + H
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLSM-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 130 HGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQL 189
H +HRD+K N+LI+ GAIKL DFG++ G R V T + APE++
Sbjct: 123 HRVLHRDLKPENLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEILLGC 179
Query: 190 HGYDFKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTL----QNAPPGLDYERDRK 242
Y DIWS G E+ A F S+ + + TL + PG+ D K
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 239
Query: 243 ----------FSKSF-------KQMIASCLVKDPSKRPSAKKLLKHSFFK 275
FSK + +++ L DP+KR SAK L H FF+
Sbjct: 240 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 289
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 136/290 (46%), Gaps = 29/290 (10%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDL-SNISREAQTMILVDHP 69
E++ E++G+G V++A E+VA+K + + + + S RE + ++HP
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 70 NVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHH 129
N++K +++ L++V F+S + A+ G +I + L ++L+GL + H
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 130 HGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQL 189
H +HRD+K N+LI+ GAIKL DFG++ G R V T + APE++
Sbjct: 124 HRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEILLGC 180
Query: 190 HGYDFKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTL----QNAPPGLDYERDRK 242
Y DIWS G E+ A F S+ + + TL + PG+ D K
Sbjct: 181 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 240
Query: 243 ----------FSKSF-------KQMIASCLVKDPSKRPSAKKLLKHSFFK 275
FSK + +++ L DP+KR SAK L H FF+
Sbjct: 241 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 290
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 139/295 (47%), Gaps = 30/295 (10%)
Query: 7 PIGA-EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDL-SNISREAQTMI 64
P+G+ E++ E++G+G V++A E+VA+K + + + + S RE +
Sbjct: 2 PLGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 61
Query: 65 LVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGL 124
++HPN++K +++ L++V F+ + A+ G +I + L ++L+GL
Sbjct: 62 ELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGL 120
Query: 125 DYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPE 184
+ H H +HRD+K N+LI+ GAIKL DFG++ G R V T + APE
Sbjct: 121 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPE 177
Query: 185 VMEQLHGYDFKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTL----QNAPPGLDY 237
++ Y DIWS G E+ A F S+ + + TL + PG+
Sbjct: 178 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS 237
Query: 238 ERDRK----------FSKSF-------KQMIASCLVKDPSKRPSAKKLLKHSFFK 275
D K FSK + +++ L DP+KR SAK L H FF+
Sbjct: 238 MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 292
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 139/295 (47%), Gaps = 30/295 (10%)
Query: 7 PIGA-EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDL-SNISREAQTMI 64
P+G+ E++ E++G+G V++A E+VA+K + + + + S RE +
Sbjct: 1 PLGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 60
Query: 65 LVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGL 124
++HPN++K +++ L++V F+ + A+ G +I + L ++L+GL
Sbjct: 61 ELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 125 DYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPE 184
+ H H +HRD+K N+LI+ GAIKL DFG++ G R V T + APE
Sbjct: 120 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPE 176
Query: 185 VMEQLHGYDFKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTL----QNAPPGLDY 237
++ Y DIWS G E+ A F S+ + + TL + PG+
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS 236
Query: 238 ERDRK----------FSKSF-------KQMIASCLVKDPSKRPSAKKLLKHSFFK 275
D K FSK + +++ L DP+KR SAK L H FF+
Sbjct: 237 MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 132/282 (46%), Gaps = 26/282 (9%)
Query: 14 TLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDN-SDLSNISREAQTMILVDHPNVL 72
T+ + +G G +V++ ++ VAVK+L+ L E + H N+L
Sbjct: 38 TVGQRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 94
Query: 73 KSHCSFVSDHNLWVVMPFMSGGSC---LHILKAAYPDGFEEVVIATILREVLKGLDYLHH 129
+ + L +V + G S LHI++ FE + + I R+ +G+DYLH
Sbjct: 95 -LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQGMDYLHA 149
Query: 130 HGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFD-SGDRQRMRNTFVGTPCWMAPEV--M 186
IHRD+KS NI + +K+GDFG++ SG Q G+ WMAPEV M
Sbjct: 150 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQ--FEQLSGSILWMAPEVIRM 207
Query: 187 EQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDR-KFSK 245
+ + Y F++D+++FGI EL G P+S ++ + D + R K
Sbjct: 208 QDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPK 267
Query: 246 SFKQMIASCLVKDPSKRPSAKKLLKHSFFKQARSNEYIARTL 287
+ K+++A CL K +RP ++L S E +AR+L
Sbjct: 268 AMKRLMAECLKKKRDERPLFPQILA--------SIELLARSL 301
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 132/282 (46%), Gaps = 26/282 (9%)
Query: 14 TLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDN-SDLSNISREAQTMILVDHPNVL 72
T+ + +G G +V++ ++ VAVK+L+ L E + H N+L
Sbjct: 39 TVGQRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 95
Query: 73 KSHCSFVSDHNLWVVMPFMSGGSC---LHILKAAYPDGFEEVVIATILREVLKGLDYLHH 129
+ + L +V + G S LHI++ FE + + I R+ +G+DYLH
Sbjct: 96 -LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQGMDYLHA 150
Query: 130 HGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFD-SGDRQRMRNTFVGTPCWMAPEV--M 186
IHRD+KS NI + +K+GDFG++ SG Q G+ WMAPEV M
Sbjct: 151 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQ--FEQLSGSILWMAPEVIRM 208
Query: 187 EQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDR-KFSK 245
+ + Y F++D+++FGI EL G P+S ++ + D + R K
Sbjct: 209 QDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPK 268
Query: 246 SFKQMIASCLVKDPSKRPSAKKLLKHSFFKQARSNEYIARTL 287
+ K+++A CL K +RP ++L S E +AR+L
Sbjct: 269 AMKRLMAECLKKKRDERPLFPQILA--------SIELLARSL 302
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 132/282 (46%), Gaps = 26/282 (9%)
Query: 14 TLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDN-SDLSNISREAQTMILVDHPNVL 72
T+ + +G G +V++ ++ VAVK+L+ L E + H N+L
Sbjct: 16 TVGQRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 72
Query: 73 KSHCSFVSDHNLWVVMPFMSGGSC---LHILKAAYPDGFEEVVIATILREVLKGLDYLHH 129
+ + L +V + G S LHI++ FE + + I R+ +G+DYLH
Sbjct: 73 -LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQGMDYLHA 127
Query: 130 HGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFD-SGDRQRMRNTFVGTPCWMAPEV--M 186
IHRD+KS NI + +K+GDFG++ SG Q G+ WMAPEV M
Sbjct: 128 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQ--FEQLSGSILWMAPEVIRM 185
Query: 187 EQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDR-KFSK 245
+ + Y F++D+++FGI EL G P+S ++ + D + R K
Sbjct: 186 QDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPK 245
Query: 246 SFKQMIASCLVKDPSKRPSAKKLLKHSFFKQARSNEYIARTL 287
+ K+++A CL K +RP ++L S E +AR+L
Sbjct: 246 AMKRLMAECLKKKRDERPLFPQILA--------SIELLARSL 279
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 135/290 (46%), Gaps = 29/290 (10%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDL-SNISREAQTMILVDHP 69
E++ E++G+G V++A E+VA+K + + + + S RE + ++HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 70 NVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHH 129
N++K +++ L++V F+ + A+ G +I + L ++L+GL + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHS 121
Query: 130 HGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQL 189
H +HRD+K N+LI+ GAIKL DFG++ G R V T + APE++
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYTHEVVTLWYRAPEILLGC 178
Query: 190 HGYDFKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTL----QNAPPGLDYERDRK 242
Y DIWS G E+ A F S+ + + TL + PG+ D K
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 238
Query: 243 ----------FSKSF-------KQMIASCLVKDPSKRPSAKKLLKHSFFK 275
FSK + +++ L DP+KR SAK L H FF+
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 139/298 (46%), Gaps = 33/298 (11%)
Query: 7 PIGA----EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDL-SNISREAQ 61
P+G+ E++ E++G+G V++A E+VA+K + + + + S RE
Sbjct: 2 PLGSPEFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREIS 61
Query: 62 TMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVL 121
+ ++HPN++K +++ L++V F+ + A+ G +I + L ++L
Sbjct: 62 LLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLL 120
Query: 122 KGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWM 181
+GL + H H +HRD+K N+LI+ GAIKL DFG++ G R V T +
Sbjct: 121 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYTHEVVTLWYR 177
Query: 182 APEVMEQLHGYDFKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTL----QNAPPG 234
APE++ Y DIWS G E+ A F S+ + + TL + PG
Sbjct: 178 APEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 237
Query: 235 LDYERDRK----------FSKSF-------KQMIASCLVKDPSKRPSAKKLLKHSFFK 275
+ D K FSK + +++ L DP+KR SAK L H FF+
Sbjct: 238 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 295
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 132/282 (46%), Gaps = 26/282 (9%)
Query: 14 TLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDN-SDLSNISREAQTMILVDHPNVL 72
T+ + +G G +V++ ++ VAVK+L+ L E + H N+L
Sbjct: 16 TVGQRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 72
Query: 73 KSHCSFVSDHNLWVVMPFMSGGSC---LHILKAAYPDGFEEVVIATILREVLKGLDYLHH 129
+ + L +V + G S LHI++ FE + + I R+ +G+DYLH
Sbjct: 73 -LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQGMDYLHA 127
Query: 130 HGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFD-SGDRQRMRNTFVGTPCWMAPEV--M 186
IHRD+KS NI + +K+GDFG++ SG Q G+ WMAPEV M
Sbjct: 128 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQ--FEQLSGSILWMAPEVIRM 185
Query: 187 EQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDR-KFSK 245
+ + Y F++D+++FGI EL G P+S ++ + D + R K
Sbjct: 186 QDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPK 245
Query: 246 SFKQMIASCLVKDPSKRPSAKKLLKHSFFKQARSNEYIARTL 287
+ K+++A CL K +RP ++L S E +AR+L
Sbjct: 246 AMKRLMAECLKKKRDERPLFPQILA--------SIELLARSL 279
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 135/281 (48%), Gaps = 25/281 (8%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREA---QTMIL-- 65
+HY + EE+G G A V + + A K + R S +SRE + IL
Sbjct: 26 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILRE 85
Query: 66 VDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLD 125
+ HPN++ H F + ++ +++ +SGG L A + E L+++L G+
Sbjct: 86 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFL--AEKESLTEDEATQFLKQILDGVH 143
Query: 126 YLHHHGHIHRDVKSGNILIDVRGA----IKLGDFGVSACLFDSGDRQRMRNTFVGTPCWM 181
YLH H D+K NI++ + IKL DFG++ + ++G+ +N F GTP ++
Sbjct: 144 YLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI-EAGN--EFKNIF-GTPEFV 199
Query: 182 APEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDR 241
APE++ +AD+WS G+ L G +PF + TL N ++Y+ D
Sbjct: 200 APEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGETKQE----TLTNI-SAVNYDFDE 253
Query: 242 KF----SKSFKQMIASCLVKDPSKRPSAKKLLKHSFFKQAR 278
++ S+ K I LVKDP +R + L+HS+ K R
Sbjct: 254 EYFSNTSELAKDFIRRLLVKDPKRRMXIAQSLEHSWIKAIR 294
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 132/282 (46%), Gaps = 26/282 (9%)
Query: 14 TLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDN-SDLSNISREAQTMILVDHPNVL 72
T+ + +G G +V++ ++ VAVK+L+ L E + H N+L
Sbjct: 13 TVGQRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 69
Query: 73 KSHCSFVSDHNLWVVMPFMSGGSC---LHILKAAYPDGFEEVVIATILREVLKGLDYLHH 129
+ + L +V + G S LHI++ FE + + I R+ +G+DYLH
Sbjct: 70 -LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQGMDYLHA 124
Query: 130 HGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFD-SGDRQRMRNTFVGTPCWMAPEV--M 186
IHRD+KS NI + +K+GDFG++ SG Q G+ WMAPEV M
Sbjct: 125 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQ--FEQLSGSILWMAPEVIRM 182
Query: 187 EQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDR-KFSK 245
+ + Y F++D+++FGI EL G P+S ++ + D + R K
Sbjct: 183 QDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPK 242
Query: 246 SFKQMIASCLVKDPSKRPSAKKLLKHSFFKQARSNEYIARTL 287
+ K+++A CL K +RP ++L S E +AR+L
Sbjct: 243 AMKRLMAECLKKKRDERPLFPQILA--------SIELLARSL 276
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 119/233 (51%), Gaps = 13/233 (5%)
Query: 39 VAVKILDFERDNSDLSNISREAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLH 98
VAVK++ + D +EAQTM+ + HP ++K + ++ +++V ++S G L+
Sbjct: 35 VAVKMIKEGSMSED--EFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLN 92
Query: 99 ILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVS 158
L++ + G E + + +V +G+ +L H IHRD+ + N L+D +K+ DFG++
Sbjct: 93 YLRS-HGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMT 151
Query: 159 ACLFDSGDRQRMRNTFVGTPC-WMAPEVMEQLHGYDFKADIWSFGITALE-LAHGHAPFS 216
+ D Q + + P W APEV Y K+D+W+FGI E + G P+
Sbjct: 152 RYVLDD---QYVSSVGTKFPVKWSAPEVFHYFK-YSSKSDVWAFGILMWEVFSLGKMPYD 207
Query: 217 KYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLL 269
Y +V+L Q G R S + Q++ SC + P KRP+ ++LL
Sbjct: 208 LYTNSEVVLKVSQ----GHRLYRPHLASDTIYQIMYSCWHELPEKRPTFQQLL 256
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 126/261 (48%), Gaps = 14/261 (5%)
Query: 12 HYTLYEEVGQGVSASVHRALCIPFNEIVAVKILD-FERDNSDLSNISREAQTMILVDHPN 70
+Y L + +G+G A V A I + VAVKI+D + ++S L + RE + +++HPN
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPN 74
Query: 71 VLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHH 130
++K ++ L++V + SGG L A +E R+++ + Y H
Sbjct: 75 IVKLFEVIETEKTLYLVXEYASGGEVFDYLVAH--GRXKEKEARAKFRQIVSAVQYCHQK 132
Query: 131 GHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLH 190
+HRD+K+ N+L+D IK+ DFG S F G++ + F G P + APE+ Q
Sbjct: 133 FIVHRDLKAENLLLDADXNIKIADFGFSNE-FTFGNKL---DAFCGAPPYAAPELF-QGK 187
Query: 191 GYDF-KADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQ 249
YD + D+WS G+ L G PF ++ L+ Y S +
Sbjct: 188 KYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK-----YRIPFYXSTDCEN 242
Query: 250 MIASCLVKDPSKRPSAKKLLK 270
++ L+ +PSKR + +++ K
Sbjct: 243 LLKKFLILNPSKRGTLEQIXK 263
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 139/298 (46%), Gaps = 33/298 (11%)
Query: 7 PIGA----EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDL-SNISREAQ 61
P+G+ E++ E++G+G V++A E+VA+K + + + + S RE
Sbjct: 2 PLGSPEFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREIS 61
Query: 62 TMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVL 121
+ ++HPN++K +++ L++V F+ + A+ G +I + L ++L
Sbjct: 62 LLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLL 120
Query: 122 KGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWM 181
+GL + H H +HRD+K N+LI+ GAIKL DFG++ G R V T +
Sbjct: 121 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYTHEVVTLWYR 177
Query: 182 APEVMEQLHGYDFKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTL----QNAPPG 234
APE++ Y DIWS G E+ A F S+ + + TL + PG
Sbjct: 178 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 237
Query: 235 LDYERDRK----------FSKSF-------KQMIASCLVKDPSKRPSAKKLLKHSFFK 275
+ D K FSK + +++ L DP+KR SAK L H FF+
Sbjct: 238 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 295
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 135/290 (46%), Gaps = 29/290 (10%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDL-SNISREAQTMILVDHP 69
E++ E++G+G V++A E+VA+K + + + + S RE + ++HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 70 NVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHH 129
N++K +++ L++V F+ + A+ G +I + L ++L+GL + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 130 HGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQL 189
H +HRD+K N+LI+ GAIKL DFG++ G R V T + APE++
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYTHEVVTLWYRAPEILLGX 178
Query: 190 HGYDFKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTL----QNAPPGLDYERDRK 242
Y DIWS G E+ A F S+ + + TL + PG+ D K
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 238
Query: 243 ----------FSKSF-------KQMIASCLVKDPSKRPSAKKLLKHSFFK 275
FSK + +++ L DP+KR SAK L H FF+
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 132/282 (46%), Gaps = 26/282 (9%)
Query: 14 TLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDN-SDLSNISREAQTMILVDHPNVL 72
T+ + +G G +V++ ++ VAVK+L+ L E + H N+L
Sbjct: 11 TVGQRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 67
Query: 73 KSHCSFVSDHNLWVVMPFMSGGSC---LHILKAAYPDGFEEVVIATILREVLKGLDYLHH 129
+ + L +V + G S LHI++ FE + + I R+ +G+DYLH
Sbjct: 68 -LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQGMDYLHA 122
Query: 130 HGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFD-SGDRQRMRNTFVGTPCWMAPEV--M 186
IHRD+KS NI + +K+GDFG++ SG Q G+ WMAPEV M
Sbjct: 123 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQ--FEQLSGSILWMAPEVIRM 180
Query: 187 EQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDR-KFSK 245
+ + Y F++D+++FGI EL G P+S ++ + D + R K
Sbjct: 181 QDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPK 240
Query: 246 SFKQMIASCLVKDPSKRPSAKKLLKHSFFKQARSNEYIARTL 287
+ K+++A CL K +RP ++L S E +AR+L
Sbjct: 241 AMKRLMAECLKKKRDERPLFPQILA--------SIELLARSL 274
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 136/294 (46%), Gaps = 29/294 (9%)
Query: 7 PIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDL-SNISREAQTMIL 65
P E++ E++G+G V++A E+VA+K + + + + S RE +
Sbjct: 1 PGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 60
Query: 66 VDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLD 125
++HPN++K +++ L++V F+ + A+ G +I + L ++L+GL
Sbjct: 61 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 119
Query: 126 YLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEV 185
+ H H +HRD+K N+LI+ GAIKL DFG++ G R V T + APE+
Sbjct: 120 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEI 176
Query: 186 MEQLHGYDFKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTL----QNAPPGLDYE 238
+ Y DIWS G E+ A F S+ + + TL + PG+
Sbjct: 177 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 236
Query: 239 RDRK----------FSKSF-------KQMIASCLVKDPSKRPSAKKLLKHSFFK 275
D K FSK + +++ L DP+KR SAK L H FF+
Sbjct: 237 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 290
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 136/294 (46%), Gaps = 29/294 (9%)
Query: 7 PIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDL-SNISREAQTMIL 65
P E++ E++G+G V++A E+VA+K + + + + S RE +
Sbjct: 1 PGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 60
Query: 66 VDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLD 125
++HPN++K +++ L++V F+ + A+ G +I + L ++L+GL
Sbjct: 61 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 119
Query: 126 YLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEV 185
+ H H +HRD+K N+LI+ GAIKL DFG++ G R V T + APE+
Sbjct: 120 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEI 176
Query: 186 MEQLHGYDFKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTL----QNAPPGLDYE 238
+ Y DIWS G E+ A F S+ + + TL + PG+
Sbjct: 177 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 236
Query: 239 RDRK----------FSKSF-------KQMIASCLVKDPSKRPSAKKLLKHSFFK 275
D K FSK + +++ L DP+KR SAK L H FF+
Sbjct: 237 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 290
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 136/293 (46%), Gaps = 29/293 (9%)
Query: 8 IGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDL-SNISREAQTMILV 66
+ E++ E++G+G V++A E+VA+K + + + + S RE + +
Sbjct: 4 VDMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 63
Query: 67 DHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDY 126
+HPN++K +++ L++V F+ + A+ G +I + L ++L+GL +
Sbjct: 64 NHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 122
Query: 127 LHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVM 186
H H +HRD+K N+LI+ GAIKL DFG++ G R V T + APE++
Sbjct: 123 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYTHEVVTLWYRAPEIL 179
Query: 187 EQLHGYDFKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTL----QNAPPGLDYER 239
Y DIWS G E+ A F S+ + + TL + PG+
Sbjct: 180 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 239
Query: 240 DRK----------FSKSF-------KQMIASCLVKDPSKRPSAKKLLKHSFFK 275
D K FSK + +++ L DP+KR SAK L H FF+
Sbjct: 240 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 292
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 136/294 (46%), Gaps = 29/294 (9%)
Query: 7 PIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDL-SNISREAQTMIL 65
P E++ E++G+G V++A E+VA+K + + + + S RE +
Sbjct: 2 PGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 66 VDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLD 125
++HPN++K +++ L++V F+ + A+ G +I + L ++L+GL
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 126 YLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEV 185
+ H H +HRD+K N+LI+ GAIKL DFG++ G R V T + APE+
Sbjct: 121 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEI 177
Query: 186 MEQLHGYDFKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTL----QNAPPGLDYE 238
+ Y DIWS G E+ A F S+ + + TL + PG+
Sbjct: 178 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 237
Query: 239 RDRK----------FSKSF-------KQMIASCLVKDPSKRPSAKKLLKHSFFK 275
D K FSK + +++ L DP+KR SAK L H FF+
Sbjct: 238 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 135/290 (46%), Gaps = 29/290 (10%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDL-SNISREAQTMILVDHP 69
E++ E++G+G V++A E+VA+K + + + + S RE + ++HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 70 NVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHH 129
N++K +++ L++V F+ + A+ G +I + L ++L+GL + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 130 HGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQL 189
H +HRD+K N+LI+ GAIKL DFG++ G R V T + APE++
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYTHEVVTLWYRAPEILLGC 177
Query: 190 HGYDFKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTL----QNAPPGLDYERDRK 242
Y DIWS G E+ A F S+ + + TL + PG+ D K
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 237
Query: 243 ----------FSKSF-------KQMIASCLVKDPSKRPSAKKLLKHSFFK 275
FSK + +++ L DP+KR SAK L H FF+
Sbjct: 238 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 132/282 (46%), Gaps = 26/282 (9%)
Query: 14 TLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDN-SDLSNISREAQTMILVDHPNVL 72
T+ + +G G +V++ ++ VAVK+L+ L E + H N+L
Sbjct: 11 TVGQRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 67
Query: 73 KSHCSFVSDHNLWVVMPFMSGGSC---LHILKAAYPDGFEEVVIATILREVLKGLDYLHH 129
+ + L +V + G S LHI++ FE + + I R+ +G+DYLH
Sbjct: 68 -LFMGYSTAPQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQGMDYLHA 122
Query: 130 HGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFD-SGDRQRMRNTFVGTPCWMAPEV--M 186
IHRD+KS NI + +K+GDFG++ SG Q G+ WMAPEV M
Sbjct: 123 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQ--FEQLSGSILWMAPEVIRM 180
Query: 187 EQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDR-KFSK 245
+ + Y F++D+++FGI EL G P+S ++ + D + R K
Sbjct: 181 QDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPK 240
Query: 246 SFKQMIASCLVKDPSKRPSAKKLLKHSFFKQARSNEYIARTL 287
+ K+++A CL K +RP ++L S E +AR+L
Sbjct: 241 AMKRLMAECLKKKRDERPLFPQILA--------SIELLARSL 274
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 136/294 (46%), Gaps = 29/294 (9%)
Query: 7 PIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDL-SNISREAQTMIL 65
P E++ E++G+G V++A E+VA+K + + + + S RE +
Sbjct: 1 PGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 60
Query: 66 VDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLD 125
++HPN++K +++ L++V F+ + A+ G +I + L ++L+GL
Sbjct: 61 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 119
Query: 126 YLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEV 185
+ H H +HRD+K N+LI+ GAIKL DFG++ G R V T + APE+
Sbjct: 120 FCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEI 176
Query: 186 MEQLHGYDFKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTL----QNAPPGLDYE 238
+ Y DIWS G E+ A F S+ + + TL + PG+
Sbjct: 177 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 236
Query: 239 RDRK----------FSKSF-------KQMIASCLVKDPSKRPSAKKLLKHSFFK 275
D K FSK + +++ L DP+KR SAK L H FF+
Sbjct: 237 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 290
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 135/290 (46%), Gaps = 29/290 (10%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDL-SNISREAQTMILVDHP 69
E++ E++G+G V++A E+VA+K + + + + S RE + ++HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 70 NVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHH 129
N++K +++ L++V F+ + A+ G +I + L ++L+GL + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 130 HGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQL 189
H +HRD+K N+LI+ GAIKL DFG++ G R V T + APE++
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEILLGC 178
Query: 190 HGYDFKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTL----QNAPPGLDYERDRK 242
Y DIWS G E+ A F S+ + + TL + PG+ D K
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 238
Query: 243 ----------FSKSF-------KQMIASCLVKDPSKRPSAKKLLKHSFFK 275
FSK + +++ L DP+KR SAK L H FF+
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 135/290 (46%), Gaps = 29/290 (10%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDL-SNISREAQTMILVDHP 69
E++ E++G+G V++A E+VA+K + + + + S RE + ++HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 70 NVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHH 129
N++K +++ L++V F+ + A+ G +I + L ++L+GL + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 130 HGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQL 189
H +HRD+K N+LI+ GAIKL DFG++ G R V T + APE++
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYTHEVVTLWYRAPEILLGC 178
Query: 190 HGYDFKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTL----QNAPPGLDYERDRK 242
Y DIWS G E+ A F S+ + + TL + PG+ D K
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 238
Query: 243 ----------FSKSF-------KQMIASCLVKDPSKRPSAKKLLKHSFFK 275
FSK + +++ L DP+KR SAK L H FF+
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 135/290 (46%), Gaps = 29/290 (10%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDL-SNISREAQTMILVDHP 69
E++ E++G+G V++A E+VA+K + + + + S RE + ++HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 70 NVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHH 129
N++K +++ L++V F+ + A+ G +I + L ++L+GL + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 130 HGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQL 189
H +HRD+K N+LI+ GAIKL DFG++ G R V T + APE++
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYTHEVVTLWYRAPEILLGC 177
Query: 190 HGYDFKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTL----QNAPPGLDYERDRK 242
Y DIWS G E+ A F S+ + + TL + PG+ D K
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 237
Query: 243 ----------FSKSF-------KQMIASCLVKDPSKRPSAKKLLKHSFFK 275
FSK + +++ L DP+KR SAK L H FF+
Sbjct: 238 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 135/290 (46%), Gaps = 29/290 (10%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDL-SNISREAQTMILVDHP 69
E++ E++G+G V++A E+VA+K + + + + S RE + ++HP
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 70 NVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHH 129
N++K +++ L++V F+ + A+ G +I + L ++L+GL + H
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 130 HGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQL 189
H +HRD+K N+LI+ GAIKL DFG++ G R V T + APE++
Sbjct: 123 HRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYTHEVVTLWYRAPEILLGC 179
Query: 190 HGYDFKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTL----QNAPPGLDYERDRK 242
Y DIWS G E+ A F S+ + + TL + PG+ D K
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 239
Query: 243 ----------FSKSF-------KQMIASCLVKDPSKRPSAKKLLKHSFFK 275
FSK + +++ L DP+KR SAK L H FF+
Sbjct: 240 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 289
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 133/286 (46%), Gaps = 34/286 (11%)
Query: 14 TLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDN-SDLSNISREAQTMILVDHPNVL 72
T+ + +G G +V++ ++ VAVK+L+ L E + H N+L
Sbjct: 39 TVGQRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 95
Query: 73 KSHCSFVSDHNLWVVMPFMSGGSC---LHILKAAYPDGFEEVVIATILREVLKGLDYLHH 129
+ + L +V + G S LHI++ FE + + I R+ +G+DYLH
Sbjct: 96 -LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQGMDYLHA 150
Query: 130 HGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNT-----FVGTPCWMAPE 184
IHRD+KS NI + +K+GDFG++ ++ R + G+ WMAPE
Sbjct: 151 KSIIHRDLKSNNIFLHEDLTVKIGDFGLAT------EKSRWSGSHQFEQLSGSILWMAPE 204
Query: 185 V--MEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDR- 241
V M+ + Y F++D+++FGI EL G P+S ++ + D + R
Sbjct: 205 VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRS 264
Query: 242 KFSKSFKQMIASCLVKDPSKRPSAKKLLKHSFFKQARSNEYIARTL 287
K+ K+++A CL K +RP ++L S E +AR+L
Sbjct: 265 NCPKAMKRLMAECLKKKRDERPLFPQILA--------SIELLARSL 302
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 136/294 (46%), Gaps = 29/294 (9%)
Query: 7 PIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDL-SNISREAQTMIL 65
P E++ E++G+G V++A E+VA+K + + + + S RE +
Sbjct: 2 PGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 66 VDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLD 125
++HPN++K +++ L++V F+ + A+ G +I + L ++L+GL
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKTFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 126 YLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEV 185
+ H H +HRD+K N+LI+ GAIKL DFG++ G R V T + APE+
Sbjct: 121 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEI 177
Query: 186 MEQLHGYDFKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTL----QNAPPGLDYE 238
+ Y DIWS G E+ A F S+ + + TL + PG+
Sbjct: 178 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 237
Query: 239 RDRK----------FSKSF-------KQMIASCLVKDPSKRPSAKKLLKHSFFK 275
D K FSK + +++ L DP+KR SAK L H FF+
Sbjct: 238 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 123/262 (46%), Gaps = 14/262 (5%)
Query: 3 KKKYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFER--DNSDLSNISREA 60
+KK P E + + +G+G ++V A + + A+KIL+ + + ++RE
Sbjct: 5 RKKRP---EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRER 61
Query: 61 QTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREV 120
M +DHP +K + +F D L+ + + G L ++ F+E E+
Sbjct: 62 DVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEI 119
Query: 121 LKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCW 180
+ L+YLH G IHRD+K NIL++ I++ DFG + L +Q N FVGT +
Sbjct: 120 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL-SPESKQARANXFVGTAQY 178
Query: 181 MAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERD 240
++PE++ + +D+W+ G +L G PF + ++ L+Y+
Sbjct: 179 VSPELLTEKSACK-SSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-----LEYDFP 232
Query: 241 RKFSKSFKQMIASCLVKDPSKR 262
KF + ++ LV D +KR
Sbjct: 233 EKFFPKARDLVEKLLVLDATKR 254
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 123/262 (46%), Gaps = 14/262 (5%)
Query: 3 KKKYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFER--DNSDLSNISREA 60
+KK P E + + +G+G ++V A + + A+KIL+ + + ++RE
Sbjct: 4 RKKRP---EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRER 60
Query: 61 QTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREV 120
M +DHP +K + +F D L+ + + G L ++ F+E E+
Sbjct: 61 DVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEI 118
Query: 121 LKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCW 180
+ L+YLH G IHRD+K NIL++ I++ DFG + L +Q N FVGT +
Sbjct: 119 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL-SPESKQARANXFVGTAQY 177
Query: 181 MAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERD 240
++PE++ + +D+W+ G +L G PF + ++ L+Y+
Sbjct: 178 VSPELLTEKSACK-SSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-----LEYDFP 231
Query: 241 RKFSKSFKQMIASCLVKDPSKR 262
KF + ++ LV D +KR
Sbjct: 232 EKFFPKARDLVEKLLVLDATKR 253
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 135/290 (46%), Gaps = 29/290 (10%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDL-SNISREAQTMILVDHP 69
E++ E++G+G V++A E+VA+K + + + + S RE + ++HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 70 NVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHH 129
N++K +++ L++V F+ + A+ G +I + L ++L+GL + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 130 HGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQL 189
H +HRD+K N+LI+ GAIKL DFG++ G R V T + APE++
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEILLGC 178
Query: 190 HGYDFKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTL----QNAPPGLDYERDRK 242
Y DIWS G E+ A F S+ + + TL + PG+ D K
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 238
Query: 243 ----------FSKSF-------KQMIASCLVKDPSKRPSAKKLLKHSFFK 275
FSK + +++ L DP+KR SAK L H FF+
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 104/209 (49%), Gaps = 11/209 (5%)
Query: 66 VDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLD 125
+D+P+V+ H F D ++VV+ S L + K E +R+ ++G+
Sbjct: 99 LDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRR--KAVTEPEARYFMRQTIQGVQ 156
Query: 126 YLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEV 185
YLH++ IHRD+K GN+ ++ +K+GDFG++ + G+R++ GTP ++APEV
Sbjct: 157 YLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKK---XLCGTPNYIAPEV 213
Query: 186 MEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSK 245
+ + G+ F+ DIWS G L G PF + + +N +Y R +
Sbjct: 214 LCK-KGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKN-----EYSVPRHINP 267
Query: 246 SFKQMIASCLVKDPSKRPSAKKLLKHSFF 274
+I L DP+ RPS +LL FF
Sbjct: 268 VASALIRRMLHADPTLRPSVAELLTDEFF 296
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 135/290 (46%), Gaps = 29/290 (10%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDL-SNISREAQTMILVDHP 69
E++ E++G+G V++A E+VA+K + + + + S RE + ++HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 70 NVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHH 129
N++K +++ L++V F+ + A+ G +I + L ++L+GL + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 130 HGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQL 189
H +HRD+K N+LI+ GAIKL DFG++ G R V T + APE++
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEILLGC 178
Query: 190 HGYDFKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTL----QNAPPGLDYERDRK 242
Y DIWS G E+ A F S+ + + TL + PG+ D K
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 238
Query: 243 ----------FSKSF-------KQMIASCLVKDPSKRPSAKKLLKHSFFK 275
FSK + +++ L DP+KR SAK L H FF+
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 130/269 (48%), Gaps = 21/269 (7%)
Query: 13 YTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPNVL 72
+ E +G G + V A ++ AVK + + S+I E + + H N++
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIV 83
Query: 73 KSHCSFVSDHNLWVVMPFMSGGSCL-HILKAAYPDGFEEVVIATILREVLKGLDYLHHHG 131
+ S ++L++VM +SGG I++ + + E +T++R+VL + YLH G
Sbjct: 84 ALEDIYESPNHLYLVMQLVSGGELFDRIVEKGF---YTEKDASTLIRQVLDAVYYLHRMG 140
Query: 132 HIHRDVKSGNILI---DVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQ 188
+HRD+K N+L D I + DFG+S + GD + +T GTP ++APEV+ Q
Sbjct: 141 IVHRDLKPENLLYYSQDEESKIMISDFGLSK-MEGKGD---VMSTACGTPGYVAPEVLAQ 196
Query: 189 LHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKF----S 244
Y D WS G+ A L G+ PF K+ L+ +YE D + S
Sbjct: 197 -KPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILK-----AEYEFDSPYWDDIS 250
Query: 245 KSFKQMIASCLVKDPSKRPSAKKLLKHSF 273
S K I + + KDP+KR + ++ +H +
Sbjct: 251 DSAKDFIRNLMEKDPNKRYTCEQAARHPW 279
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 132/282 (46%), Gaps = 26/282 (9%)
Query: 14 TLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDN-SDLSNISREAQTMILVDHPNVL 72
T+ + +G G +V++ ++ VAVK+L+ L E + H N+L
Sbjct: 31 TVGQRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 87
Query: 73 KSHCSFVSDHNLWVVMPFMSGGSC---LHILKAAYPDGFEEVVIATILREVLKGLDYLHH 129
+ + L +V + G S LHI++ FE + + I R+ +G+DYLH
Sbjct: 88 -LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQGMDYLHA 142
Query: 130 HGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFD-SGDRQRMRNTFVGTPCWMAPEV--M 186
IHRD+KS NI + +K+GDFG++ SG Q G+ WMAPEV M
Sbjct: 143 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQ--FEQLSGSILWMAPEVIRM 200
Query: 187 EQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDR-KFSK 245
+ + Y F++D+++FGI EL G P+S ++ + D + R K
Sbjct: 201 QDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPK 260
Query: 246 SFKQMIASCLVKDPSKRPSAKKLLKHSFFKQARSNEYIARTL 287
+ K+++A CL K +RP ++L S E +AR+L
Sbjct: 261 AMKRLMAECLKKKRDERPLFPQILA--------SIELLARSL 294
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 124/265 (46%), Gaps = 17/265 (6%)
Query: 19 VGQGVSASVHRALCIPFNEIVAVKILDFER--DNSDLSNISREAQTMILVDHPNVLKSHC 76
+G+G ++V A + + A+KIL+ + + ++RE M +DHP +K +
Sbjct: 41 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 100
Query: 77 SFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRD 136
+F D L+ + + G L ++ F+E E++ L+YLH G IHRD
Sbjct: 101 TFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLHGKGIIHRD 158
Query: 137 VKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFKA 196
+K NIL++ I++ DFG + L +Q N+FVGT +++PE++ + +
Sbjct: 159 LKPENILLNEDMHIQITDFGTAKVL-SPESKQARANSFVGTAQYVSPELLTEKSACK-SS 216
Query: 197 DIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLV 256
D+W+ G +L G PF + ++ L+Y+ KF + ++ LV
Sbjct: 217 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-----LEYDFPEKFFPKARDLVEKLLV 271
Query: 257 KDPSKRPSAKK------LLKHSFFK 275
D +KR ++ L H FF+
Sbjct: 272 LDATKRLGCEEMEGYGPLKAHPFFE 296
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 135/290 (46%), Gaps = 29/290 (10%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDL-SNISREAQTMILVDHP 69
E++ E++G+G V++A E+VA+K + + + + S RE + ++HP
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 70 NVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHH 129
N++K +++ L++V F+ + A+ G +I + L ++L+GL + H
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 130 HGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQL 189
H +HRD+K N+LI+ GAIKL DFG++ G R V T + APE++
Sbjct: 123 HRVLHRDLKPENLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEILLGC 179
Query: 190 HGYDFKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTL----QNAPPGLDYERDRK 242
Y DIWS G E+ A F S+ + + TL + PG+ D K
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 239
Query: 243 ----------FSKSF-------KQMIASCLVKDPSKRPSAKKLLKHSFFK 275
FSK + +++ L DP+KR SAK L H FF+
Sbjct: 240 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 289
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 135/290 (46%), Gaps = 29/290 (10%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDL-SNISREAQTMILVDHP 69
E++ E++G+G V++A E+VA+K + + + + S RE + ++HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 70 NVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHH 129
N++K +++ L++V F+ + A+ G +I + L ++L+GL + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 130 HGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQL 189
H +HRD+K N+LI+ GAIKL DFG++ G R V T + APE++
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEILLGC 178
Query: 190 HGYDFKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTL----QNAPPGLDYERDRK 242
Y DIWS G E+ A F S+ + + TL + PG+ D K
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 238
Query: 243 ----------FSKSF-------KQMIASCLVKDPSKRPSAKKLLKHSFFK 275
FSK + +++ L DP+KR SAK L H FF+
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 135/290 (46%), Gaps = 29/290 (10%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDL-SNISREAQTMILVDHP 69
E++ E++G+G V++A E+VA+K + + + + S RE + ++HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 70 NVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHH 129
N++K +++ L++V F+ + A+ G +I + L ++L+GL + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 130 HGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQL 189
H +HRD+K N+LI+ GAIKL DFG++ G R V T + APE++
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEILLGC 177
Query: 190 HGYDFKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTL----QNAPPGLDYERDRK 242
Y DIWS G E+ A F S+ + + TL + PG+ D K
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 237
Query: 243 ----------FSKSF-------KQMIASCLVKDPSKRPSAKKLLKHSFFK 275
FSK + +++ L DP+KR SAK L H FF+
Sbjct: 238 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 135/278 (48%), Gaps = 25/278 (8%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREA---QTMIL-- 65
+HY + EE+G G A V + + A K + R +S +SRE + IL
Sbjct: 12 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 71
Query: 66 VDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLD 125
+ HPN++ H F + ++ +++ +SGG L A + E L+++L G+
Sbjct: 72 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFL--AEKESLTEDEATQFLKQILDGVH 129
Query: 126 YLHHHGHIHRDVKSGNILIDVRGA----IKLGDFGVSACLFDSGDRQRMRNTFVGTPCWM 181
YLH H D+K NI++ + IKL DFG++ + ++G+ +N F GTP ++
Sbjct: 130 YLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI-EAGN--EFKNIF-GTPEFV 185
Query: 182 APEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDR 241
APE++ +AD+WS G+ L G +PF + TL N ++Y+ D
Sbjct: 186 APEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGETKQE----TLTNI-SAVNYDFDE 239
Query: 242 KF----SKSFKQMIASCLVKDPSKRPSAKKLLKHSFFK 275
++ S+ K I LVKDP +R + L+HS+ K
Sbjct: 240 EYFSNTSELAKDFIRRLLVKDPKRRMXIAQSLEHSWIK 277
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 104/209 (49%), Gaps = 11/209 (5%)
Query: 66 VDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLD 125
+D+P+V+ H F D ++VV+ S L + K E +R+ ++G+
Sbjct: 99 LDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRR--KAVTEPEARYFMRQTIQGVQ 156
Query: 126 YLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEV 185
YLH++ IHRD+K GN+ ++ +K+GDFG++ + G+R++ GTP ++APEV
Sbjct: 157 YLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKK---DLCGTPNYIAPEV 213
Query: 186 MEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSK 245
+ + G+ F+ DIWS G L G PF + + +N +Y R +
Sbjct: 214 LCK-KGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKN-----EYSVPRHINP 267
Query: 246 SFKQMIASCLVKDPSKRPSAKKLLKHSFF 274
+I L DP+ RPS +LL FF
Sbjct: 268 VASALIRRMLHADPTLRPSVAELLTDEFF 296
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 135/290 (46%), Gaps = 29/290 (10%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDL-SNISREAQTMILVDHP 69
E++ E++G+G V++A E+VA+K + + + + S RE + ++HP
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 70 NVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHH 129
N++K +++ L++V F+ + A+ G +I + L ++L+GL + H
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 130 HGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQL 189
H +HRD+K N+LI+ GAIKL DFG++ G R V T + APE++
Sbjct: 123 HRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEILLGC 179
Query: 190 HGYDFKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTL----QNAPPGLDYERDRK 242
Y DIWS G E+ A F S+ + + TL + PG+ D K
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 239
Query: 243 ----------FSKSF-------KQMIASCLVKDPSKRPSAKKLLKHSFFK 275
FSK + +++ L DP+KR SAK L H FF+
Sbjct: 240 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 289
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 123/262 (46%), Gaps = 14/262 (5%)
Query: 3 KKKYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFER--DNSDLSNISREA 60
+KK P E + + +G+G ++V A + + A+KIL+ + + ++RE
Sbjct: 3 RKKRP---EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRER 59
Query: 61 QTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREV 120
M +DHP +K + +F D L+ + + G L ++ F+E E+
Sbjct: 60 DVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEI 117
Query: 121 LKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCW 180
+ L+YLH G IHRD+K NIL++ I++ DFG + L +Q N FVGT +
Sbjct: 118 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL-SPESKQARANXFVGTAQY 176
Query: 181 MAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERD 240
++PE++ + +D+W+ G +L G PF + ++ L+Y+
Sbjct: 177 VSPELLTEKSACK-SSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-----LEYDFP 230
Query: 241 RKFSKSFKQMIASCLVKDPSKR 262
KF + ++ LV D +KR
Sbjct: 231 EKFFPKARDLVEKLLVLDATKR 252
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 135/290 (46%), Gaps = 29/290 (10%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDL-SNISREAQTMILVDHP 69
E++ E++G+G V++A E+VA+K + + + + S RE + ++HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 70 NVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHH 129
N++K +++ L++V F+ + A+ G +I + L ++L+GL + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 130 HGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQL 189
H +HRD+K N+LI+ GAIKL DFG++ G R V T + APE++
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEILLGC 177
Query: 190 HGYDFKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTL----QNAPPGLDYERDRK 242
Y DIWS G E+ A F S+ + + TL + PG+ D K
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 237
Query: 243 ----------FSKSF-------KQMIASCLVKDPSKRPSAKKLLKHSFFK 275
FSK + +++ L DP+KR SAK L H FF+
Sbjct: 238 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 135/287 (47%), Gaps = 24/287 (8%)
Query: 6 YPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDF-ERDNSDLSNISREAQTMI 64
+ I A L +G G +V++ ++ VAVKIL + E +
Sbjct: 31 WEIEASEVMLSTRIGSGSFGTVYKG---KWHGDVAVKILKVVDPTPEQFQAFRNEVAVLR 87
Query: 65 LVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSC---LHILKAAYPDGFEEVVIATILREVL 121
H N+L +++ NL +V + G S LH+ + F+ + I R+
Sbjct: 88 KTRHVNIL-LFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETK----FQMFQLIDIARQTA 142
Query: 122 KGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFD-SGDRQRMRNTFVGTPCW 180
+G+DYLH IHRD+KS NI + +K+GDFG++ SG +Q + T G+ W
Sbjct: 143 QGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPT--GSVLW 200
Query: 181 MAPEV--MEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYE 238
MAPEV M+ + + F++D++S+GI EL G P+S ++ + D
Sbjct: 201 MAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLS 260
Query: 239 RDRK-FSKSFKQMIASCLVKDPSKRP------SAKKLLKHSFFKQAR 278
+ K K+ K+++A C+ K +RP S+ +LL+HS K R
Sbjct: 261 KLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLPKINR 307
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 134/267 (50%), Gaps = 11/267 (4%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNS-DLSNISREAQTMILVDHP 69
E Y L+EE+G+G + V R + + + A I++ ++ ++ D + REA+ L+ HP
Sbjct: 11 EEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHP 70
Query: 70 NVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHH 129
N+++ H S + + +++ ++GG + A + + E + ++++L+ + + H
Sbjct: 71 NIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAR--EYYSEADASHCIQQILEAVLHCHQ 128
Query: 130 HGHIHRDVKSGNILIDVR---GAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVM 186
G +HR++K N+L+ + A+KL DFG++ + Q+ F GTP +++PEV+
Sbjct: 129 MGVVHRNLKPENLLLASKLKGAAVKLADFGLA---IEVEGEQQAWFGFAGTPGYLSPEVL 185
Query: 187 EQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKS 246
+ Y D+W+ G+ L G+ PF ++ A E D +
Sbjct: 186 RK-DPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWD-TVTPE 243
Query: 247 FKQMIASCLVKDPSKRPSAKKLLKHSF 273
K +I L +PSKR +A + LKH +
Sbjct: 244 AKDLINKMLTINPSKRITAAEALKHPW 270
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 124/265 (46%), Gaps = 17/265 (6%)
Query: 19 VGQGVSASVHRALCIPFNEIVAVKILDFER--DNSDLSNISREAQTMILVDHPNVLKSHC 76
+G+G ++V A + + A+KIL+ + + ++RE M +DHP +K +
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 99
Query: 77 SFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRD 136
+F D L+ + + G L ++ F+E E++ L+YLH G IHRD
Sbjct: 100 TFQDDEKLYFGLSYAKNGCLLKYIRKI--GSFDETCTRFYTAEIVSALEYLHGKGIIHRD 157
Query: 137 VKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFKA 196
+K NIL++ I++ DFG + L +Q N+FVGT +++PE++ + +
Sbjct: 158 LKPENILLNEDMHIQITDFGTAKVL-SPESKQARANSFVGTAQYVSPELLTEKSASK-SS 215
Query: 197 DIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLV 256
D+W+ G +L G PF + ++ L+Y+ KF + ++ LV
Sbjct: 216 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-----LEYDFPEKFFPKARDLVEKLLV 270
Query: 257 KDPSKRPSAKK------LLKHSFFK 275
D +KR ++ L H FF+
Sbjct: 271 LDATKRLGCEEMEGYGPLKAHPFFE 295
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 133/286 (46%), Gaps = 34/286 (11%)
Query: 14 TLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDN-SDLSNISREAQTMILVDHPNVL 72
T+ + +G G +V++ ++ VAVK+L+ L E + H N+L
Sbjct: 11 TVGQRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 67
Query: 73 KSHCSFVSDHNLWVVMPFMSGGSC---LHILKAAYPDGFEEVVIATILREVLKGLDYLHH 129
+ + L +V + G S LHI++ FE + + I R+ +G+DYLH
Sbjct: 68 -LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQGMDYLHA 122
Query: 130 HGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNT-----FVGTPCWMAPE 184
IHRD+KS NI + +K+GDFG++ ++ R + G+ WMAPE
Sbjct: 123 KSIIHRDLKSNNIFLHEDLTVKIGDFGLAT------EKSRWSGSHQFEQLSGSILWMAPE 176
Query: 185 V--MEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDR- 241
V M+ + Y F++D+++FGI EL G P+S ++ + D + R
Sbjct: 177 VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRS 236
Query: 242 KFSKSFKQMIASCLVKDPSKRPSAKKLLKHSFFKQARSNEYIARTL 287
K+ K+++A CL K +RP ++L S E +AR+L
Sbjct: 237 NCPKAMKRLMAECLKKKRDERPLFPQILA--------SIELLARSL 274
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 135/290 (46%), Gaps = 29/290 (10%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDL-SNISREAQTMILVDHP 69
E++ E++G+G V++A E+VA+K + + + + S RE + ++HP
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 70 NVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHH 129
N++K +++ L++V F+ + A+ G +I + L ++L+GL + H
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 130 HGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQL 189
H +HRD+K N+LI+ GAIKL DFG++ G R V T + APE++
Sbjct: 123 HRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEILLGC 179
Query: 190 HGYDFKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTL----QNAPPGLDYERDRK 242
Y DIWS G E+ A F S+ + + TL + PG+ D K
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 239
Query: 243 ----------FSKSF-------KQMIASCLVKDPSKRPSAKKLLKHSFFK 275
FSK + +++ L DP+KR SAK L H FF+
Sbjct: 240 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 289
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 123/262 (46%), Gaps = 14/262 (5%)
Query: 3 KKKYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFER--DNSDLSNISREA 60
+KK P E + + +G+G ++V A + + A+KIL+ + + ++RE
Sbjct: 2 RKKRP---EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRER 58
Query: 61 QTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREV 120
M +DHP +K + +F D L+ + + G L ++ F+E E+
Sbjct: 59 DVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEI 116
Query: 121 LKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCW 180
+ L+YLH G IHRD+K NIL++ I++ DFG + L +Q N FVGT +
Sbjct: 117 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL-SPESKQARANXFVGTAQY 175
Query: 181 MAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERD 240
++PE++ + +D+W+ G +L G PF + ++ L+Y+
Sbjct: 176 VSPELLTEKSACK-SSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-----LEYDFP 229
Query: 241 RKFSKSFKQMIASCLVKDPSKR 262
KF + ++ LV D +KR
Sbjct: 230 EKFFPKARDLVEKLLVLDATKR 251
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 104/209 (49%), Gaps = 11/209 (5%)
Query: 66 VDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLD 125
+D+P+V+ H F D ++VV+ S L + K E +R+ ++G+
Sbjct: 83 LDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRR--KAVTEPEARYFMRQTIQGVQ 140
Query: 126 YLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEV 185
YLH++ IHRD+K GN+ ++ +K+GDFG++ + G+R++ GTP ++APEV
Sbjct: 141 YLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKK---DLCGTPNYIAPEV 197
Query: 186 MEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSK 245
+ + G+ F+ DIWS G L G PF + + +N +Y R +
Sbjct: 198 LCK-KGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKN-----EYSVPRHINP 251
Query: 246 SFKQMIASCLVKDPSKRPSAKKLLKHSFF 274
+I L DP+ RPS +LL FF
Sbjct: 252 VASALIRRMLHADPTLRPSVAELLTDEFF 280
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 135/290 (46%), Gaps = 29/290 (10%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDL-SNISREAQTMILVDHP 69
E++ E++G+G V++A E+VA+K + + + + S RE + ++HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 70 NVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHH 129
N++K +++ L++V F+ + A+ G +I + L ++L+GL + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-DLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 130 HGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQL 189
H +HRD+K N+LI+ GAIKL DFG++ G R V T + APE++
Sbjct: 122 HRVLHRDLKPENLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEILLGC 178
Query: 190 HGYDFKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTL----QNAPPGLDYERDRK 242
Y DIWS G E+ A F S+ + + TL + PG+ D K
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 238
Query: 243 ----------FSKSF-------KQMIASCLVKDPSKRPSAKKLLKHSFFK 275
FSK + +++ L DP+KR SAK L H FF+
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 123/265 (46%), Gaps = 17/265 (6%)
Query: 19 VGQGVSASVHRALCIPFNEIVAVKILDFER--DNSDLSNISREAQTMILVDHPNVLKSHC 76
+G+G ++V A + + A+KIL+ + + ++RE M +DHP +K +
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 97
Query: 77 SFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRD 136
+F D L+ + + G L ++ F+E E++ L+YLH G IHRD
Sbjct: 98 TFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLHGKGIIHRD 155
Query: 137 VKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFKA 196
+K NIL++ I++ DFG + L +Q N FVGT +++PE++ + +
Sbjct: 156 LKPENILLNEDMHIQITDFGTAKVL-SPESKQARANAFVGTAQYVSPELLTEKSACK-SS 213
Query: 197 DIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLV 256
D+W+ G +L G PF + ++ L+Y+ KF + ++ LV
Sbjct: 214 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-----LEYDFPEKFFPKARDLVEKLLV 268
Query: 257 KDPSKRPSAKK------LLKHSFFK 275
D +KR ++ L H FF+
Sbjct: 269 LDATKRLGCEEMEGYGPLKAHPFFE 293
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 123/265 (46%), Gaps = 17/265 (6%)
Query: 19 VGQGVSASVHRALCIPFNEIVAVKILDFER--DNSDLSNISREAQTMILVDHPNVLKSHC 76
+G+G ++V A + + A+KIL+ + + ++RE M +DHP +K +
Sbjct: 41 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 100
Query: 77 SFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRD 136
+F D L+ + + G L ++ F+E E++ L+YLH G IHRD
Sbjct: 101 TFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLHGKGIIHRD 158
Query: 137 VKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFKA 196
+K NIL++ I++ DFG + L +Q N FVGT +++PE++ + +
Sbjct: 159 LKPENILLNEDMHIQITDFGTAKVL-SPESKQARANXFVGTAQYVSPELLTEKSACK-SS 216
Query: 197 DIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLV 256
D+W+ G +L G PF + ++ L+Y+ KF + ++ LV
Sbjct: 217 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-----LEYDFPEKFFPKARDLVEKLLV 271
Query: 257 KDPSKRPSAKK------LLKHSFFK 275
D +KR ++ L H FF+
Sbjct: 272 LDATKRLGCEEMEGYGPLKAHPFFE 296
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 124/265 (46%), Gaps = 17/265 (6%)
Query: 19 VGQGVSASVHRALCIPFNEIVAVKILDFER--DNSDLSNISREAQTMILVDHPNVLKSHC 76
+G+G ++V A + + A+KIL+ + + ++RE M +DHP +K +
Sbjct: 37 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 96
Query: 77 SFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRD 136
+F D L+ + + G L ++ F+E E++ L+YLH G IHRD
Sbjct: 97 TFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLHGKGIIHRD 154
Query: 137 VKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFKA 196
+K NIL++ I++ DFG + L +Q N+FVGT +++PE++ + +
Sbjct: 155 LKPENILLNEDMHIQITDFGTAKVL-SPESKQARANSFVGTAQYVSPELLTEKSACK-SS 212
Query: 197 DIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLV 256
D+W+ G +L G PF + ++ L+Y+ KF + ++ LV
Sbjct: 213 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-----LEYDFPEKFFPKARDLVEKLLV 267
Query: 257 KDPSKRPSAKK------LLKHSFFK 275
D +KR ++ L H FF+
Sbjct: 268 LDATKRLGCEEMEGYGPLKAHPFFE 292
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 123/265 (46%), Gaps = 17/265 (6%)
Query: 19 VGQGVSASVHRALCIPFNEIVAVKILDFER--DNSDLSNISREAQTMILVDHPNVLKSHC 76
+G+G ++V A + + A+KIL+ + + ++RE M +DHP +K +
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 99
Query: 77 SFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRD 136
+F D L+ + + G L ++ F+E E++ L+YLH G IHRD
Sbjct: 100 TFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLHGKGIIHRD 157
Query: 137 VKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFKA 196
+K NIL++ I++ DFG + L +Q N FVGT +++PE++ + +
Sbjct: 158 LKPENILLNEDMHIQITDFGTAKVL-SPESKQARANXFVGTAQYVSPELLTEKSACK-SS 215
Query: 197 DIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLV 256
D+W+ G +L G PF + ++ L+Y+ KF + ++ LV
Sbjct: 216 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-----LEYDFPEKFFPKARDLVEKLLV 270
Query: 257 KDPSKRPSAKK------LLKHSFFK 275
D +KR ++ L H FF+
Sbjct: 271 LDATKRLGCEEMEGYGPLKAHPFFE 295
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 123/265 (46%), Gaps = 17/265 (6%)
Query: 19 VGQGVSASVHRALCIPFNEIVAVKILDFER--DNSDLSNISREAQTMILVDHPNVLKSHC 76
+G+G ++V A + + A+KIL+ + + ++RE M +DHP +K +
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 97
Query: 77 SFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRD 136
+F D L+ + + G L ++ F+E E++ L+YLH G IHRD
Sbjct: 98 TFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLHGKGIIHRD 155
Query: 137 VKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFKA 196
+K NIL++ I++ DFG + L +Q N FVGT +++PE++ + +
Sbjct: 156 LKPENILLNEDMHIQITDFGTAKVL-SPESKQARANXFVGTAQYVSPELLTEKSACK-SS 213
Query: 197 DIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLV 256
D+W+ G +L G PF + ++ L+Y+ KF + ++ LV
Sbjct: 214 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-----LEYDFPEKFFPKARDLVEKLLV 268
Query: 257 KDPSKRPSAKK------LLKHSFFK 275
D +KR ++ L H FF+
Sbjct: 269 LDATKRLGCEEMEGYGPLKAHPFFE 293
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 123/265 (46%), Gaps = 17/265 (6%)
Query: 19 VGQGVSASVHRALCIPFNEIVAVKILDFER--DNSDLSNISREAQTMILVDHPNVLKSHC 76
+G+G ++V A + + A+KIL+ + + ++RE M +DHP +K +
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 99
Query: 77 SFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRD 136
+F D L+ + + G L ++ F+E E++ L+YLH G IHRD
Sbjct: 100 TFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLHGKGIIHRD 157
Query: 137 VKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFKA 196
+K NIL++ I++ DFG + L +Q N FVGT +++PE++ + +
Sbjct: 158 LKPENILLNEDMHIQITDFGTAKVL-SPESKQARANXFVGTAQYVSPELLTEKSACK-SS 215
Query: 197 DIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLV 256
D+W+ G +L G PF + ++ L+Y+ KF + ++ LV
Sbjct: 216 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-----LEYDFPEKFFPKARDLVEKLLV 270
Query: 257 KDPSKRPSAKK------LLKHSFFK 275
D +KR ++ L H FF+
Sbjct: 271 LDATKRLGCEEMEGYGPLKAHPFFE 295
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 123/265 (46%), Gaps = 17/265 (6%)
Query: 19 VGQGVSASVHRALCIPFNEIVAVKILDFER--DNSDLSNISREAQTMILVDHPNVLKSHC 76
+G+G ++V A + + A+KIL+ + + ++RE M +DHP +K +
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 99
Query: 77 SFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRD 136
+F D L+ + + G L ++ F+E E++ L+YLH G IHRD
Sbjct: 100 TFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLHGKGIIHRD 157
Query: 137 VKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFKA 196
+K NIL++ I++ DFG + L +Q N FVGT +++PE++ + +
Sbjct: 158 LKPENILLNEDMHIQITDFGTAKVL-SPESKQARANXFVGTAQYVSPELLTEKSACK-SS 215
Query: 197 DIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLV 256
D+W+ G +L G PF + ++ L+Y+ KF + ++ LV
Sbjct: 216 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-----LEYDFPEKFFPKARDLVEKLLV 270
Query: 257 KDPSKRPSAKK------LLKHSFFK 275
D +KR ++ L H FF+
Sbjct: 271 LDATKRLGCEEMEGYGPLKAHPFFE 295
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 123/265 (46%), Gaps = 17/265 (6%)
Query: 19 VGQGVSASVHRALCIPFNEIVAVKILDFER--DNSDLSNISREAQTMILVDHPNVLKSHC 76
+G+G ++V A + + A+KIL+ + + ++RE M +DHP +K +
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 99
Query: 77 SFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRD 136
+F D L+ + + G L ++ F+E E++ L+YLH G IHRD
Sbjct: 100 TFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLHGKGIIHRD 157
Query: 137 VKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFKA 196
+K NIL++ I++ DFG + L +Q N FVGT +++PE++ + +
Sbjct: 158 LKPENILLNEDMHIQITDFGTAKVL-SPESKQARANXFVGTAQYVSPELLTEKSAXK-SS 215
Query: 197 DIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLV 256
D+W+ G +L G PF + ++ L+Y+ KF + ++ LV
Sbjct: 216 DLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIK-----LEYDFPEKFFPKARDLVEKLLV 270
Query: 257 KDPSKRPSAKK------LLKHSFFK 275
D +KR ++ L H FF+
Sbjct: 271 LDATKRLGCEEMEGYGPLKAHPFFE 295
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 123/265 (46%), Gaps = 17/265 (6%)
Query: 19 VGQGVSASVHRALCIPFNEIVAVKILDFER--DNSDLSNISREAQTMILVDHPNVLKSHC 76
+G+G ++V A + + A+KIL+ + + ++RE M +DHP +K +
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 97
Query: 77 SFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRD 136
+F D L+ + + G L ++ F+E E++ L+YLH G IHRD
Sbjct: 98 TFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLHGKGIIHRD 155
Query: 137 VKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFKA 196
+K NIL++ I++ DFG + L +Q N FVGT +++PE++ + +
Sbjct: 156 LKPENILLNEDMHIQITDFGTAKVL-SPESKQARANXFVGTAQYVSPELLTEKSACK-SS 213
Query: 197 DIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLV 256
D+W+ G +L G PF + ++ L+Y+ KF + ++ LV
Sbjct: 214 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-----LEYDFPEKFFPKARDLVEKLLV 268
Query: 257 KDPSKRPSAKK------LLKHSFFK 275
D +KR ++ L H FF+
Sbjct: 269 LDATKRLGCEEMEGYGPLKAHPFFE 293
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 123/265 (46%), Gaps = 17/265 (6%)
Query: 19 VGQGVSASVHRALCIPFNEIVAVKILDFER--DNSDLSNISREAQTMILVDHPNVLKSHC 76
+G+G ++V A + + A+KIL+ + + ++RE M +DHP +K +
Sbjct: 37 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 96
Query: 77 SFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRD 136
+F D L+ + + G L ++ F+E E++ L+YLH G IHRD
Sbjct: 97 TFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLHGKGIIHRD 154
Query: 137 VKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFKA 196
+K NIL++ I++ DFG + L +Q N FVGT +++PE++ + +
Sbjct: 155 LKPENILLNEDMHIQITDFGTAKVL-SPESKQARANXFVGTAQYVSPELLTEKSACK-SS 212
Query: 197 DIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLV 256
D+W+ G +L G PF + ++ L+Y+ KF + ++ LV
Sbjct: 213 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-----LEYDFPEKFFPKARDLVEKLLV 267
Query: 257 KDPSKRPSAKK------LLKHSFFK 275
D +KR ++ L H FF+
Sbjct: 268 LDATKRLGCEEMEGYGPLKAHPFFE 292
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 123/265 (46%), Gaps = 17/265 (6%)
Query: 19 VGQGVSASVHRALCIPFNEIVAVKILDFER--DNSDLSNISREAQTMILVDHPNVLKSHC 76
+G+G ++V A + + A+KIL+ + + ++RE M +DHP +K +
Sbjct: 22 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 81
Query: 77 SFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRD 136
+F D L+ + + G L ++ F+E E++ L+YLH G IHRD
Sbjct: 82 TFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLHGKGIIHRD 139
Query: 137 VKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFKA 196
+K NIL++ I++ DFG + L +Q N FVGT +++PE++ + +
Sbjct: 140 LKPENILLNEDMHIQITDFGTAKVL-SPESKQARANXFVGTAQYVSPELLTEKSACK-SS 197
Query: 197 DIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLV 256
D+W+ G +L G PF + ++ L+Y+ KF + ++ LV
Sbjct: 198 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-----LEYDFPEKFFPKARDLVEKLLV 252
Query: 257 KDPSKRPSAKK------LLKHSFFK 275
D +KR ++ L H FF+
Sbjct: 253 LDATKRLGCEEMEGYGPLKAHPFFE 277
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 126/273 (46%), Gaps = 17/273 (6%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFER--DNSDLSNISREAQTMILVDH 68
E + + +G+G ++V A + + A+KIL+ + + ++RE M +DH
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 69 PNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLH 128
P +K + +F D L+ + + G L ++ F+E E++ L+YLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLH 149
Query: 129 HHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQ 188
G IHRD+K NIL++ I++ DFG + L +Q N FVGT +++PE++ +
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVL-SPESKQARANXFVGTAQYVSPELLTE 208
Query: 189 LHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFK 248
+D+W+ G +L G PF + ++ L+Y+ KF +
Sbjct: 209 KSACK-SSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIK-----LEYDFPEKFFPKAR 262
Query: 249 QMIASCLVKDPSKRPSAKK------LLKHSFFK 275
++ LV D +KR ++ L H FF+
Sbjct: 263 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 295
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 133/265 (50%), Gaps = 12/265 (4%)
Query: 10 AEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNS-DLSNISREAQTMILVDH 68
+++Y + EE+G+G + V R + A KI++ ++ ++ D + REA+ + H
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 87
Query: 69 PNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLH 128
PN+++ H S + ++V ++GG + A + + E + ++++L+ + Y H
Sbjct: 88 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR--EFYSEADASHCIQQILESIAYCH 145
Query: 129 HHGHIHRDVKSGNILIDVR---GAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEV 185
+G +HR++K N+L+ + A+KL DFG++ + DS + F GTP +++PEV
Sbjct: 146 SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS----EAWHGFAGTPGYLSPEV 201
Query: 186 MEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSK 245
+++ Y DIW+ G+ L G+ PF ++ A E D +
Sbjct: 202 LKK-DPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWD-TVTP 259
Query: 246 SFKQMIASCLVKDPSKRPSAKKLLK 270
K +I S L +P KR +A + LK
Sbjct: 260 EAKSLIDSMLTVNPKKRITADQALK 284
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 134/290 (46%), Gaps = 29/290 (10%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDL-SNISREAQTMILVDHP 69
E++ E++G+G V++A E+VA+ + + + + S RE + ++HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 70 NVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHH 129
N++K +++ L++V F+ + A+ G +I + L ++L+GL + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 130 HGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQL 189
H +HRD+K N+LI+ GAIKL DFG++ G R V T + APE++
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYTHEVVTLWYRAPEILLGC 178
Query: 190 HGYDFKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTL----QNAPPGLDYERDRK 242
Y DIWS G E+ A F S+ + + TL + PG+ D K
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 238
Query: 243 ----------FSKSF-------KQMIASCLVKDPSKRPSAKKLLKHSFFK 275
FSK + +++ L DP+KR SAK L H FF+
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 134/290 (46%), Gaps = 29/290 (10%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDL-SNISREAQTMILVDHP 69
E++ E++G+G V++A E+VA+ + + + + S RE + ++HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 70 NVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHH 129
N++K +++ L++V F+ + A+ G +I + L ++L+GL + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 130 HGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQL 189
H +HRD+K N+LI+ GAIKL DFG++ G R V T + APE++
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYTHEVVTLWYRAPEILLGC 177
Query: 190 HGYDFKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTL----QNAPPGLDYERDRK 242
Y DIWS G E+ A F S+ + + TL + PG+ D K
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 237
Query: 243 ----------FSKSF-------KQMIASCLVKDPSKRPSAKKLLKHSFFK 275
FSK + +++ L DP+KR SAK L H FF+
Sbjct: 238 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 125/273 (45%), Gaps = 17/273 (6%)
Query: 20 GQGVSASVHRALCIPFNEIVAVKILD---FERDNSDLSNISREAQTMILVDHPNVLKSHC 76
G G V + +I A+K+L R+ D ++ E + V HP ++
Sbjct: 29 GYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIY 88
Query: 77 SFVSDHNLWVVMPFMSGGSCLHILKAAYPDG-FEEVVIATILREVLKGLDYLHHHGHIHR 135
+F + L++++ ++SGG L+ +G F E L E+ L +LH G I+R
Sbjct: 89 AFQTGGKLYLILEYLSGGELFMQLER---EGIFMEDTACFYLAEISMALGHLHQKGIIYR 145
Query: 136 DVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFK 195
D+K NI+++ +G +KL DFG+ G + +TF GT +MAPE++ + G++
Sbjct: 146 DLKPENIMLNHQGHVKLTDFGLCKESIHDGT---VTHTFCGTIEYMAPEILMR-SGHNRA 201
Query: 196 ADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ---NAPPGLDYERDRKFSKSFKQMIA 252
D WS G ++ G PF+ K + L+ N PP L E K K+ A
Sbjct: 202 VDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLTQEARDLLKKLLKRNAA 261
Query: 253 SCLVKDPSKRPSAKKLLKHSFFKQARSNEYIAR 285
S L P A ++ H FF+ E +AR
Sbjct: 262 SRLGAGPG---DAGEVQAHPFFRHINWEELLAR 291
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 122/265 (46%), Gaps = 17/265 (6%)
Query: 19 VGQGVSASVHRALCIPFNEIVAVKILDFER--DNSDLSNISREAQTMILVDHPNVLKSHC 76
+G+G ++V A + + A+KIL+ + + ++RE M +DHP +K +
Sbjct: 45 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 104
Query: 77 SFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRD 136
F D L+ + + G L ++ F+E E++ L+YLH G IHRD
Sbjct: 105 CFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLHGKGIIHRD 162
Query: 137 VKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFKA 196
+K NIL++ I++ DFG + L +Q N FVGT +++PE++ + +
Sbjct: 163 LKPENILLNEDMHIQITDFGTAKVL-SPESKQARANXFVGTAQYVSPELLTEKSACK-SS 220
Query: 197 DIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLV 256
D+W+ G +L G PF + ++ L+Y+ KF + ++ LV
Sbjct: 221 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-----LEYDFPEKFFPKARDLVEKLLV 275
Query: 257 KDPSKRPSAKK------LLKHSFFK 275
D +KR ++ L H FF+
Sbjct: 276 LDATKRLGCEEMEGYGPLKAHPFFE 300
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 124/277 (44%), Gaps = 19/277 (6%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFE-------RDNSDLSNISREAQTM 63
+ Y + + +G G V A + VA+KI+ R+ N+ E + +
Sbjct: 9 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 68
Query: 64 ILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKG 123
++HP ++K +F + ++V+ M GG K +E ++L
Sbjct: 69 KKLNHPCIIKIK-NFFDAEDYYIVLELMEGGELFD--KVVGNKRLKEATCKLYFYQMLLA 125
Query: 124 LDYLHHHGHIHRDVKSGNILIDVRGA---IKLGDFGVSACLFDSGDRQRMRNTFVGTPCW 180
+ YLH +G IHRD+K N+L+ + IK+ DFG S L G+ MR T GTP +
Sbjct: 126 VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL---GETSLMR-TLCGTPTY 181
Query: 181 MAPEVMEQL--HGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYE 238
+APEV+ + GY+ D WS G+ G+ PFS++ L + + E
Sbjct: 182 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPE 241
Query: 239 RDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSFFK 275
+ S+ ++ LV DP R + ++ L+H + +
Sbjct: 242 VWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 278
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 135/288 (46%), Gaps = 25/288 (8%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISRE---AQTMIL-- 65
++Y EE+G G A V + A K + R S +SRE + IL
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 66 VDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLD 125
+ HPNV+ H + + ++ +++ ++GG L A + E L+++L G+
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVY 128
Query: 126 YLHHHGHIHRDVKSGNILIDVRGA----IKLGDFGVSACLFDSGDRQRMRNTFVGTPCWM 181
YLH H D+K NI++ R IK+ DFG++ + D G+ +N F GTP ++
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-DFGNE--FKNIF-GTPAFV 184
Query: 182 APEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYE-RD 240
APE++ +AD+WS G+ L G +PF + TL N ++YE D
Sbjct: 185 APEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE----TLANVS-AVNYEFED 238
Query: 241 RKFSKS---FKQMIASCLVKDPSKRPSAKKLLKHSFFKQARSNEYIAR 285
FS + K I LVKDP KR + + L+H + K + + ++R
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSR 286
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 124/277 (44%), Gaps = 19/277 (6%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFE-------RDNSDLSNISREAQTM 63
+ Y + + +G G V A + VA+KI+ R+ N+ E + +
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 64 ILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKG 123
++HP ++K +F + ++V+ M GG K +E ++L
Sbjct: 70 KKLNHPCIIKIK-NFFDAEDYYIVLELMEGGELFD--KVVGNKRLKEATCKLYFYQMLLA 126
Query: 124 LDYLHHHGHIHRDVKSGNILIDVRGA---IKLGDFGVSACLFDSGDRQRMRNTFVGTPCW 180
+ YLH +G IHRD+K N+L+ + IK+ DFG S L G+ MR T GTP +
Sbjct: 127 VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL---GETSLMR-TLCGTPTY 182
Query: 181 MAPEVMEQL--HGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYE 238
+APEV+ + GY+ D WS G+ G+ PFS++ L + + E
Sbjct: 183 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPE 242
Query: 239 RDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSFFK 275
+ S+ ++ LV DP R + ++ L+H + +
Sbjct: 243 VWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 279
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 104/214 (48%), Gaps = 13/214 (6%)
Query: 7 PIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFE--RDNSDLSNISREAQTMI 64
P+G + + L +G+G A V + I A+K++ E D+ D+ + E
Sbjct: 5 PLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFE 64
Query: 65 LV-DHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKA--AYPDGFEEVVIATILREVL 121
+HP ++ H F ++ L+ V+ +++GG + ++ P+ A E+
Sbjct: 65 QASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSA----EIS 120
Query: 122 KGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWM 181
L+YLH G I+RD+K N+L+D G IKL D+G+ GD + F GTP ++
Sbjct: 121 LALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD---TTSXFCGTPNYI 177
Query: 182 APEVMEQLHGYDFKADIWSFGITALELAHGHAPF 215
APE++ Y F D W+ G+ E+ G +PF
Sbjct: 178 APEILRG-EDYGFSVDWWALGVLMFEMMAGRSPF 210
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 122/265 (46%), Gaps = 17/265 (6%)
Query: 19 VGQGVSASVHRALCIPFNEIVAVKILDFER--DNSDLSNISREAQTMILVDHPNVLKSHC 76
+G+G ++ A + + A+KIL+ + + ++RE M +DHP +K +
Sbjct: 38 LGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 97
Query: 77 SFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRD 136
+F D L+ + + G L ++ F+E E++ L+YLH G IHRD
Sbjct: 98 TFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLHGKGIIHRD 155
Query: 137 VKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFKA 196
+K NIL++ I++ DFG + L +Q N FVGT +++PE++ + +
Sbjct: 156 LKPENILLNEDMHIQITDFGTAKVL-SPESKQARANXFVGTAQYVSPELLTEKSACK-SS 213
Query: 197 DIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLV 256
D+W+ G +L G PF + ++ L+Y+ KF + ++ LV
Sbjct: 214 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-----LEYDFPEKFFPKARDLVEKLLV 268
Query: 257 KDPSKRPSAKK------LLKHSFFK 275
D +KR ++ L H FF+
Sbjct: 269 LDATKRLGCEEMEGYGPLKAHPFFE 293
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 124/277 (44%), Gaps = 19/277 (6%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFE-------RDNSDLSNISREAQTM 63
+ Y + + +G G V A + VA+KI+ R+ N+ E + +
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 64 ILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKG 123
++HP ++K +F + ++V+ M GG K +E ++L
Sbjct: 70 KKLNHPCIIKIK-NFFDAEDYYIVLELMEGGELFD--KVVGNKRLKEATCKLYFYQMLLA 126
Query: 124 LDYLHHHGHIHRDVKSGNILIDVRGA---IKLGDFGVSACLFDSGDRQRMRNTFVGTPCW 180
+ YLH +G IHRD+K N+L+ + IK+ DFG S L G+ MR T GTP +
Sbjct: 127 VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL---GETSLMR-TLCGTPTY 182
Query: 181 MAPEVMEQL--HGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYE 238
+APEV+ + GY+ D WS G+ G+ PFS++ L + + E
Sbjct: 183 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPE 242
Query: 239 RDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSFFK 275
+ S+ ++ LV DP R + ++ L+H + +
Sbjct: 243 VWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 279
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 124/277 (44%), Gaps = 19/277 (6%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFE-------RDNSDLSNISREAQTM 63
+ Y + + +G G V A + VA+KI+ R+ N+ E + +
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 64 ILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKG 123
++HP ++K +F + ++V+ M GG K +E ++L
Sbjct: 70 KKLNHPCIIKIK-NFFDAEDYYIVLELMEGGELFD--KVVGNKRLKEATCKLYFYQMLLA 126
Query: 124 LDYLHHHGHIHRDVKSGNILIDVRGA---IKLGDFGVSACLFDSGDRQRMRNTFVGTPCW 180
+ YLH +G IHRD+K N+L+ + IK+ DFG S L G+ MR T GTP +
Sbjct: 127 VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL---GETSLMR-TLCGTPTY 182
Query: 181 MAPEVMEQL--HGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYE 238
+APEV+ + GY+ D WS G+ G+ PFS++ L + + E
Sbjct: 183 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPE 242
Query: 239 RDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSFFK 275
+ S+ ++ LV DP R + ++ L+H + +
Sbjct: 243 VWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 279
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 124/277 (44%), Gaps = 19/277 (6%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFE-------RDNSDLSNISREAQTM 63
+ Y + + +G G V A + VA+KI+ R+ N+ E + +
Sbjct: 16 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 75
Query: 64 ILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKG 123
++HP ++K +F + ++V+ M GG K +E ++L
Sbjct: 76 KKLNHPCIIKIK-NFFDAEDYYIVLELMEGGELFD--KVVGNKRLKEATCKLYFYQMLLA 132
Query: 124 LDYLHHHGHIHRDVKSGNILIDVRGA---IKLGDFGVSACLFDSGDRQRMRNTFVGTPCW 180
+ YLH +G IHRD+K N+L+ + IK+ DFG S L G+ MR T GTP +
Sbjct: 133 VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL---GETSLMR-TLCGTPTY 188
Query: 181 MAPEVMEQL--HGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYE 238
+APEV+ + GY+ D WS G+ G+ PFS++ L + + E
Sbjct: 189 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPE 248
Query: 239 RDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSFFK 275
+ S+ ++ LV DP R + ++ L+H + +
Sbjct: 249 VWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 285
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 104/213 (48%), Gaps = 13/213 (6%)
Query: 8 IGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFE--RDNSDLSNISREAQTMIL 65
+G + + L +G+G A V + I A++++ E D+ D+ + E
Sbjct: 49 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQ 108
Query: 66 V-DHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKA--AYPDGFEEVVIATILREVLK 122
+HP ++ H F ++ L+ V+ +++GG + ++ P+ A E+
Sbjct: 109 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSA----EISL 164
Query: 123 GLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMA 182
L+YLH G I+RD+K N+L+D G IKL D+G+ GD +TF GTP ++A
Sbjct: 165 ALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD---TTSTFCGTPNYIA 221
Query: 183 PEVMEQLHGYDFKADIWSFGITALELAHGHAPF 215
PE++ Y F D W+ G+ E+ G +PF
Sbjct: 222 PEILRG-EDYGFSVDWWALGVLMFEMMAGRSPF 253
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 124/275 (45%), Gaps = 38/275 (13%)
Query: 14 TLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERD---NSDLSNISREAQTMILVDHPN 70
TL E +G G V+RA I + VAVK + D + + N+ +EA+ ++ HPN
Sbjct: 10 TLEEIIGIGGFGKVYRAFWI--GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPN 67
Query: 71 VLKSHCSFVSDHNLWVVMPFMSGGSCLHIL--KAAYPDGFEEVVIATILREVLKGLDYLH 128
++ + + NL +VM F GG +L K PD ++ ++ +G++YLH
Sbjct: 68 IIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPD-----ILVNWAVQIARGMNYLH 122
Query: 129 HHG---HIHRDVKSGNILI-------DVRGAI-KLGDFGVSACLFDSGDRQRMRNT---F 174
IHRD+KS NILI D+ I K+ DFG++ R+ R T
Sbjct: 123 DEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLA--------REWHRTTKMSA 174
Query: 175 VGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPG 234
G WMAPEV+ + + +D+WS+G+ EL G PF + V N
Sbjct: 175 AGAYAWMAPEVI-RASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNK--- 230
Query: 235 LDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLL 269
L + F +++ C DP RPS +L
Sbjct: 231 LALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNIL 265
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 128/278 (46%), Gaps = 22/278 (7%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILD--FERDNSDLSNISREAQTMILVDH 68
++Y + EE+G G VHR + + K ++ + D + N E M + H
Sbjct: 51 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKN---EISIMNQLHH 107
Query: 69 PNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLH 128
P ++ H +F + + +++ F+SGG + AA E + +R+ +GL ++H
Sbjct: 108 PKLINLHDAFEDKYEMVLILEFLSGGELFDRI-AAEDYKMSEAEVINYMRQACEGLKHMH 166
Query: 129 HHGHIHRDVKSGNILIDVRGA--IKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVM 186
H +H D+K NI+ + + A +K+ DFG++ L + + T + APE++
Sbjct: 167 EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKL----NPDEIVKVTTATAEFAAPEIV 222
Query: 187 EQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDR----K 242
++ F D+W+ G+ L G +PF+ ++ TLQN D+E D
Sbjct: 223 DR-EPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLE----TLQNV-KRCDWEFDEDAFSS 276
Query: 243 FSKSFKQMIASCLVKDPSKRPSAKKLLKHSFFKQARSN 280
S K I + L K+P KR + L+H + K SN
Sbjct: 277 VSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDHSN 314
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 135/294 (45%), Gaps = 29/294 (9%)
Query: 7 PIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDL-SNISREAQTMIL 65
P E++ E++G+G V++A E+VA+K + + + + S RE +
Sbjct: 2 PGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 66 VDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLD 125
++HPN++K +++ L++V + + A+ G +I + L ++L+GL
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEHVDQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 126 YLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEV 185
+ H H +HRD+K N+LI+ GAIKL DFG++ G R V T + APE+
Sbjct: 121 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEI 177
Query: 186 MEQLHGYDFKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTL----QNAPPGLDYE 238
+ Y DIWS G E+ A F S+ + + TL + PG+
Sbjct: 178 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 237
Query: 239 RDRK----------FSKSF-------KQMIASCLVKDPSKRPSAKKLLKHSFFK 275
D K FSK + +++ L DP+KR SAK L H FF+
Sbjct: 238 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 131/278 (47%), Gaps = 25/278 (8%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISRE---AQTMIL-- 65
++Y EE+G GV A V + A K + R S +SRE + IL
Sbjct: 11 DYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 66 VDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLD 125
+ HPNV+ H + + ++ +++ ++GG L A + E L+++L G+
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVY 128
Query: 126 YLHHHGHIHRDVKSGNILIDVRGA----IKLGDFGVSACLFDSGDRQRMRNTFVGTPCWM 181
YLH H D+K NI++ R IK+ DFG++ + D G+ +N F GTP ++
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-DFGN--EFKNIF-GTPEFV 184
Query: 182 APEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYE-RD 240
APE++ +AD+WS G+ L G +PF + TL N ++YE D
Sbjct: 185 APEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE----TLANV-SAVNYEFED 238
Query: 241 RKFSKS---FKQMIASCLVKDPSKRPSAKKLLKHSFFK 275
FS + K I LVKDP KR + + L+H + K
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 100/207 (48%), Gaps = 11/207 (5%)
Query: 68 HPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYL 127
H +V+ H F + ++VV+ S L + K E LR+++ G YL
Sbjct: 80 HQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYL 137
Query: 128 HHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVME 187
H + IHRD+K GN+ ++ +K+GDFG++ + G+R++ T GTP ++APEV+
Sbjct: 138 HRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKK---TLCGTPNYIAPEVLS 194
Query: 188 QLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSF 247
+ G+ F+ D+WS G L G PF + L +N +Y + +
Sbjct: 195 K-KGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN-----EYSIPKHINPVA 248
Query: 248 KQMIASCLVKDPSKRPSAKKLLKHSFF 274
+I L DP+ RP+ +LL FF
Sbjct: 249 ASLIQKMLQTDPTARPTINELLNDEFF 275
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 100/207 (48%), Gaps = 11/207 (5%)
Query: 68 HPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYL 127
H +V+ H F + ++VV+ S L + K E LR+++ G YL
Sbjct: 76 HQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYL 133
Query: 128 HHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVME 187
H + IHRD+K GN+ ++ +K+GDFG++ + G+R++ T GTP ++APEV+
Sbjct: 134 HRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKK---TLCGTPNYIAPEVLS 190
Query: 188 QLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSF 247
+ G+ F+ D+WS G L G PF + L +N +Y + +
Sbjct: 191 K-KGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN-----EYSIPKHINPVA 244
Query: 248 KQMIASCLVKDPSKRPSAKKLLKHSFF 274
+I L DP+ RP+ +LL FF
Sbjct: 245 ASLIQKMLQTDPTARPTINELLNDEFF 271
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 100/207 (48%), Gaps = 11/207 (5%)
Query: 68 HPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYL 127
H +V+ H F + ++VV+ S L + K E LR+++ G YL
Sbjct: 76 HQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYL 133
Query: 128 HHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVME 187
H + IHRD+K GN+ ++ +K+GDFG++ + G+R++ T GTP ++APEV+
Sbjct: 134 HRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKK---TLCGTPNYIAPEVLS 190
Query: 188 QLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSF 247
+ G+ F+ D+WS G L G PF + L +N +Y + +
Sbjct: 191 K-KGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN-----EYSIPKHINPVA 244
Query: 248 KQMIASCLVKDPSKRPSAKKLLKHSFF 274
+I L DP+ RP+ +LL FF
Sbjct: 245 ASLIQKMLQTDPTARPTINELLNDEFF 271
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 135/288 (46%), Gaps = 25/288 (8%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISRE---AQTMIL-- 65
++Y EE+G G A V + A K + R S +SRE + IL
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 66 VDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLD 125
+ HPNV+ H + + ++ +++ ++GG L A + E L+++L G+
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVY 128
Query: 126 YLHHHGHIHRDVKSGNILIDVRGA----IKLGDFGVSACLFDSGDRQRMRNTFVGTPCWM 181
YLH H D+K NI++ R IK+ DFG++ + D G+ +N F GTP ++
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-DFGNE--FKNIF-GTPEFV 184
Query: 182 APEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYE-RD 240
APE++ +AD+WS G+ L G +PF + TL N ++YE D
Sbjct: 185 APEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE----TLANVS-AVNYEFED 238
Query: 241 RKFSKS---FKQMIASCLVKDPSKRPSAKKLLKHSFFKQARSNEYIAR 285
FS + K I LVKDP KR + + L+H + K + + ++R
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSR 286
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 133/265 (50%), Gaps = 12/265 (4%)
Query: 10 AEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNS-DLSNISREAQTMILVDH 68
+++Y + EE+G+G + V R + A KI++ ++ ++ D + REA+ + H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 69 PNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLH 128
PN+++ H S + ++V ++GG + A + + E + ++++L+ + Y H
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR--EFYSEADASHCIQQILESIAYCH 122
Query: 129 HHGHIHRDVKSGNILIDVR---GAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEV 185
+G +HR++K N+L+ + A+KL DFG++ + DS + F GTP +++PEV
Sbjct: 123 SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS----EAWHGFAGTPGYLSPEV 178
Query: 186 MEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSK 245
+++ Y DIW+ G+ L G+ PF ++ A E D +
Sbjct: 179 LKK-DPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWD-TVTP 236
Query: 246 SFKQMIASCLVKDPSKRPSAKKLLK 270
K +I S L +P KR +A + LK
Sbjct: 237 EAKSLIDSMLTVNPKKRITADQALK 261
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 133/265 (50%), Gaps = 12/265 (4%)
Query: 10 AEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNS-DLSNISREAQTMILVDH 68
+++Y + EE+G+G + V R + A KI++ ++ ++ D + REA+ + H
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 63
Query: 69 PNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLH 128
PN+++ H S + ++V ++GG + A + + E + ++++L+ + Y H
Sbjct: 64 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR--EFYSEADASHCIQQILESIAYCH 121
Query: 129 HHGHIHRDVKSGNILIDVR---GAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEV 185
+G +HR++K N+L+ + A+KL DFG++ + DS + F GTP +++PEV
Sbjct: 122 SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS----EAWHGFAGTPGYLSPEV 177
Query: 186 MEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSK 245
+++ Y DIW+ G+ L G+ PF ++ A E D +
Sbjct: 178 LKK-DPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWD-TVTP 235
Query: 246 SFKQMIASCLVKDPSKRPSAKKLLK 270
K +I S L +P KR +A + LK
Sbjct: 236 EAKSLIDSMLTVNPKKRITADQALK 260
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 133/265 (50%), Gaps = 12/265 (4%)
Query: 10 AEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNS-DLSNISREAQTMILVDH 68
+++Y + EE+G+G + V R + A KI++ ++ ++ D + REA+ + H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 69 PNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLH 128
PN+++ H S + ++V ++GG + A + + E + ++++L+ + Y H
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR--EFYSEADASHCIQQILESIAYCH 122
Query: 129 HHGHIHRDVKSGNILIDVR---GAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEV 185
+G +HR++K N+L+ + A+KL DFG++ + DS + F GTP +++PEV
Sbjct: 123 SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS----EAWHGFAGTPGYLSPEV 178
Query: 186 MEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSK 245
+++ Y DIW+ G+ L G+ PF ++ A E D +
Sbjct: 179 LKK-DPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWD-TVTP 236
Query: 246 SFKQMIASCLVKDPSKRPSAKKLLK 270
K +I S L +P KR +A + LK
Sbjct: 237 EAKSLIDSMLTVNPKKRITADQALK 261
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 122/265 (46%), Gaps = 17/265 (6%)
Query: 19 VGQGVSASVHRALCIPFNEIVAVKILDFER--DNSDLSNISREAQTMILVDHPNVLKSHC 76
+G+G ++V A + + A+KIL+ + + ++RE M +DHP +K +
Sbjct: 43 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 102
Query: 77 SFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRD 136
+F D L+ + + G L ++ F+E E++ L+YLH G IHRD
Sbjct: 103 TFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLHGKGIIHRD 160
Query: 137 VKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFKA 196
+K NIL++ I++ DFG + L +Q N FVGT +++PE++ + +
Sbjct: 161 LKPENILLNEDMHIQITDFGTAKVL-SPESKQARANXFVGTAQYVSPELLTEKSACK-SS 218
Query: 197 DIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLV 256
D+W+ G +L G PF + ++ L+Y+ F + ++ LV
Sbjct: 219 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-----LEYDFPAAFFPKARDLVEKLLV 273
Query: 257 KDPSKRPSAKK------LLKHSFFK 275
D +KR ++ L H FF+
Sbjct: 274 LDATKRLGCEEMEGYGPLKAHPFFE 298
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 103/213 (48%), Gaps = 13/213 (6%)
Query: 8 IGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFE--RDNSDLSNISREAQTMIL 65
+G + + L +G+G A V + I A+K++ E D+ D+ + E
Sbjct: 17 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ 76
Query: 66 V-DHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKA--AYPDGFEEVVIATILREVLK 122
+HP ++ H F ++ L+ V+ +++GG + ++ P+ A E+
Sbjct: 77 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSA----EISL 132
Query: 123 GLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMA 182
L+YLH G I+RD+K N+L+D G IKL D+G+ GD + F GTP ++A
Sbjct: 133 ALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD---TTSXFCGTPNYIA 189
Query: 183 PEVMEQLHGYDFKADIWSFGITALELAHGHAPF 215
PE++ Y F D W+ G+ E+ G +PF
Sbjct: 190 PEILRG-EDYGFSVDWWALGVLMFEMMAGRSPF 221
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 135/288 (46%), Gaps = 25/288 (8%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISRE---AQTMIL-- 65
++Y EE+G G A V + A K + R S +SRE + IL
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 66 VDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLD 125
+ HPNV+ H + + ++ +++ ++GG L A + E L+++L G+
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVY 128
Query: 126 YLHHHGHIHRDVKSGNILIDVRGA----IKLGDFGVSACLFDSGDRQRMRNTFVGTPCWM 181
YLH H D+K NI++ R IK+ DFG++ + D G+ +N F GTP ++
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-DFGNE--FKNIF-GTPEFV 184
Query: 182 APEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYE-RD 240
APE++ +AD+WS G+ L G +PF + TL N ++YE D
Sbjct: 185 APEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE----TLANVS-AVNYEFED 238
Query: 241 RKFSKS---FKQMIASCLVKDPSKRPSAKKLLKHSFFKQARSNEYIAR 285
FS + K I LVKDP KR + + L+H + K + + ++R
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSR 286
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 126/267 (47%), Gaps = 19/267 (7%)
Query: 18 EVGQGVSASVHRALCIPFN-EIVAVKILDFERDNSDLSNISREAQTMILVDHPNVLKSHC 76
E+G+G +V++ L E+ ++ D + S+ EA+ + + HPN+++ +
Sbjct: 33 EIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYD 92
Query: 77 SFVS----DHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGH 132
S+ S + +V + G+ LK + V+ + R++LKGL +LH
Sbjct: 93 SWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIK--VLRSWCRQILKGLQFLHTRTP 150
Query: 133 --IHRDVKSGNILIDV-RGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQL 189
IHRD+K NI I G++K+GD G++ R +GTP + APE E+
Sbjct: 151 PIIHRDLKCDNIFITGPTGSVKIGDLGLATL-----KRASFAKAVIGTPEFXAPEXYEE- 204
Query: 190 HGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQ 249
YD D+++FG LE A P+S+ + + + + D+ K+
Sbjct: 205 -KYDESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSGVKPASF--DKVAIPEVKE 261
Query: 250 MIASCLVKDPSKRPSAKKLLKHSFFKQ 276
+I C+ ++ +R S K LL H+FF++
Sbjct: 262 IIEGCIRQNKDERYSIKDLLNHAFFQE 288
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 128/287 (44%), Gaps = 20/287 (6%)
Query: 2 DKKKYPIGA-EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFE-------RDNSDL 53
D+ YP + Y + + +G G V A + VA++I+ R+
Sbjct: 139 DQSVYPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPA 198
Query: 54 SNISREAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVI 113
N+ E + + ++HP ++K +F + ++V+ M GG K +E
Sbjct: 199 LNVETEIEILKKLNHPCIIKIK-NFFDAEDYYIVLELMEGGELFD--KVVGNKRLKEATC 255
Query: 114 ATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGA---IKLGDFGVSACLFDSGDRQRM 170
++L + YLH +G IHRD+K N+L+ + IK+ DFG S L G+ M
Sbjct: 256 KLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL---GETSLM 312
Query: 171 RNTFVGTPCWMAPEVMEQL--HGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTL 228
R T GTP ++APEV+ + GY+ D WS G+ G+ PFS++ L +
Sbjct: 313 R-TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI 371
Query: 229 QNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSFFK 275
+ E + S+ ++ LV DP R + ++ L+H + +
Sbjct: 372 TSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 418
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 134/290 (46%), Gaps = 29/290 (10%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDL-SNISREAQTMILVDHP 69
E++ E++G+G V++A E+VA+K + + + + S RE + ++HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 70 NVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHH 129
N++K +++ L++V + + A+ G +I + L ++L+GL + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEHVHQ-DLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 130 HGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQL 189
H +HRD+K N+LI+ GAIKL DFG++ G R V T + APE++
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYTHEVVTLWYRAPEILLGC 177
Query: 190 HGYDFKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTL----QNAPPGLDYERDRK 242
Y DIWS G E+ A F S+ + + TL + PG+ D K
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 237
Query: 243 ----------FSKSF-------KQMIASCLVKDPSKRPSAKKLLKHSFFK 275
FSK + +++ L DP+KR SAK L H FF+
Sbjct: 238 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 128/287 (44%), Gaps = 20/287 (6%)
Query: 2 DKKKYPIGA-EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFE-------RDNSDL 53
D+ YP + Y + + +G G V A + VA++I+ R+
Sbjct: 125 DQSVYPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPA 184
Query: 54 SNISREAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVI 113
N+ E + + ++HP ++K +F + ++V+ M GG K +E
Sbjct: 185 LNVETEIEILKKLNHPCIIKIK-NFFDAEDYYIVLELMEGGELFD--KVVGNKRLKEATC 241
Query: 114 ATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGA---IKLGDFGVSACLFDSGDRQRM 170
++L + YLH +G IHRD+K N+L+ + IK+ DFG S L G+ M
Sbjct: 242 KLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL---GETSLM 298
Query: 171 RNTFVGTPCWMAPEVMEQL--HGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTL 228
R T GTP ++APEV+ + GY+ D WS G+ G+ PFS++ L +
Sbjct: 299 R-TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI 357
Query: 229 QNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSFFK 275
+ E + S+ ++ LV DP R + ++ L+H + +
Sbjct: 358 TSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 404
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 129/279 (46%), Gaps = 23/279 (8%)
Query: 1 MDKKKYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKIL---DFERDNSDLSNIS 57
M+ KK E + + +G+G +V+ A I+A+K+L E+ + +
Sbjct: 1 MESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLR 59
Query: 58 REAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATIL 117
RE + + HPN+L+ + F +++++ + G+ L+ F+E AT +
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYI 117
Query: 118 REVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGT 177
E+ L Y H IHRD+K N+L+ G +K+ DFG S S R T GT
Sbjct: 118 TELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RRTTLCGT 172
Query: 178 PCWMAPEVME-QLHGYDFKADIWSFGITALELAHGHAPF--SKYPPMKVLLMTLQNAPPG 234
++ PE++E ++H D K D+WS G+ E G PF + Y + ++ P
Sbjct: 173 LDYLPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 230
Query: 235 LDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSF 273
E R +I+ L +PS+RP +++L+H +
Sbjct: 231 FVTEGAR-------DLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 135/288 (46%), Gaps = 25/288 (8%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISRE---AQTMIL-- 65
++Y EE+G G A V + A K + R S +SRE + IL
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 66 VDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLD 125
+ HPNV+ H + + ++ +++ ++GG L A + E L+++L G+
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVY 128
Query: 126 YLHHHGHIHRDVKSGNILIDVRGA----IKLGDFGVSACLFDSGDRQRMRNTFVGTPCWM 181
YLH H D+K NI++ R IK+ DFG++ + D G+ +N F GTP ++
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-DFGNE--FKNIF-GTPEFV 184
Query: 182 APEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYE-RD 240
APE++ +AD+WS G+ L G +PF + TL N ++YE D
Sbjct: 185 APEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE----TLANVS-AVNYEFED 238
Query: 241 RKFSKS---FKQMIASCLVKDPSKRPSAKKLLKHSFFKQARSNEYIAR 285
FS + K I LVKDP KR + + L+H + K + + ++R
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSR 286
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 135/288 (46%), Gaps = 25/288 (8%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISRE---AQTMIL-- 65
++Y EE+G G A V + A K + R S +SRE + IL
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 66 VDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLD 125
+ HPNV+ H + + ++ +++ ++GG L A + E L+++L G+
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVY 128
Query: 126 YLHHHGHIHRDVKSGNILIDVRGA----IKLGDFGVSACLFDSGDRQRMRNTFVGTPCWM 181
YLH H D+K NI++ R IK+ DFG++ + D G+ +N F GTP ++
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-DFGNE--FKNIF-GTPEFV 184
Query: 182 APEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYE-RD 240
APE++ +AD+WS G+ L G +PF + TL N ++YE D
Sbjct: 185 APEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE----TLANVS-AVNYEFED 238
Query: 241 RKFSKS---FKQMIASCLVKDPSKRPSAKKLLKHSFFKQARSNEYIAR 285
FS + K I LVKDP KR + + L+H + K + + ++R
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSR 286
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 124/273 (45%), Gaps = 17/273 (6%)
Query: 20 GQGVSASVHRALCIPFNEIVAVKILD---FERDNSDLSNISREAQTMILVDHPNVLKSHC 76
G G V + +I A+K+L R+ D ++ E + V HP ++
Sbjct: 29 GYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIY 88
Query: 77 SFVSDHNLWVVMPFMSGGSCLHILKAAYPDG-FEEVVIATILREVLKGLDYLHHHGHIHR 135
+F + L++++ ++SGG L+ +G F E L E+ L +LH G I+R
Sbjct: 89 AFQTGGKLYLILEYLSGGELFMQLER---EGIFMEDTACFYLAEISMALGHLHQKGIIYR 145
Query: 136 DVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFK 195
D+K NI+++ +G +KL DFG+ G + + F GT +MAPE++ + G++
Sbjct: 146 DLKPENIMLNHQGHVKLTDFGLCKESIHDGT---VTHXFCGTIEYMAPEILMR-SGHNRA 201
Query: 196 ADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ---NAPPGLDYERDRKFSKSFKQMIA 252
D WS G ++ G PF+ K + L+ N PP L E K K+ A
Sbjct: 202 VDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLTQEARDLLKKLLKRNAA 261
Query: 253 SCLVKDPSKRPSAKKLLKHSFFKQARSNEYIAR 285
S L P A ++ H FF+ E +AR
Sbjct: 262 SRLGAGPG---DAGEVQAHPFFRHINWEELLAR 291
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 129/279 (46%), Gaps = 23/279 (8%)
Query: 1 MDKKKYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKIL---DFERDNSDLSNIS 57
M+ KK E + + +G+G +V+ A I+A+K+L E+ + +
Sbjct: 3 MESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLR 61
Query: 58 REAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATIL 117
RE + + HPN+L+ + F +++++ + G+ L+ F+E AT +
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYI 119
Query: 118 REVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGT 177
E+ L Y H IHRD+K N+L+ G +K+ DFG S S R T GT
Sbjct: 120 TELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RRTTLCGT 174
Query: 178 PCWMAPEVME-QLHGYDFKADIWSFGITALELAHGHAPF--SKYPPMKVLLMTLQNAPPG 234
++ PE++E ++H D K D+WS G+ E G PF + Y + ++ P
Sbjct: 175 LDYLPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 232
Query: 235 LDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSF 273
E R +I+ L +PS+RP +++L+H +
Sbjct: 233 FVTEGAR-------DLISRLLKHNPSQRPMLREVLEHPW 264
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 128/279 (45%), Gaps = 23/279 (8%)
Query: 1 MDKKKYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKIL---DFERDNSDLSNIS 57
M+ KK E + + +G+G +V+ A I+A+K+L E+ + +
Sbjct: 3 MESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLR 61
Query: 58 REAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATIL 117
RE + + HPN+L+ + F +++++ + G L+ F+E AT +
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKL--SKFDEQRTATYI 119
Query: 118 REVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGT 177
E+ L Y H IHRD+K N+L+ G +K+ DFG S S R T GT
Sbjct: 120 TELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RRTTLCGT 174
Query: 178 PCWMAPEVME-QLHGYDFKADIWSFGITALELAHGHAPF--SKYPPMKVLLMTLQNAPPG 234
++ PE++E ++H D K D+WS G+ E G PF + Y + ++ P
Sbjct: 175 LDYLPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 232
Query: 235 LDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSF 273
E R +I+ L +PS+RP +++L+H +
Sbjct: 233 FVTEGAR-------DLISRLLKHNPSQRPMLREVLEHPW 264
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 129/284 (45%), Gaps = 35/284 (12%)
Query: 2 DKKKYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKIL---DFERDNSDLSNISR 58
+ KK E + + +G+G +V+ A I+A+K+L E+ + + R
Sbjct: 25 ESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRR 83
Query: 59 EAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILR 118
E + + HPN+L+ + F +++++ + G+ L+ F+E AT +
Sbjct: 84 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYIT 141
Query: 119 EVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTP 178
E+ L Y H IHRD+K N+L+ G +K+ DFG S S R T GT
Sbjct: 142 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RRTTLCGTL 196
Query: 179 CWMAPEVME-QLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDY 237
++ PE++E ++H D K D+WS G+ E G PF T Q Y
Sbjct: 197 DYLPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGKPPFEA--------NTYQET-----Y 241
Query: 238 ERDRKFSKSF--------KQMIASCLVKDPSKRPSAKKLLKHSF 273
+R + +F + +I+ L +PS+RP +++L+H +
Sbjct: 242 KRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 285
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 103/213 (48%), Gaps = 13/213 (6%)
Query: 8 IGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFE--RDNSDLSNISREAQTMIL 65
+G + + L +G+G A V + I A+K++ E D+ D+ + E
Sbjct: 2 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ 61
Query: 66 V-DHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKA--AYPDGFEEVVIATILREVLK 122
+HP ++ H F ++ L+ V+ +++GG + ++ P+ A E+
Sbjct: 62 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSA----EISL 117
Query: 123 GLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMA 182
L+YLH G I+RD+K N+L+D G IKL D+G+ GD + F GTP ++A
Sbjct: 118 ALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD---TTSXFCGTPNYIA 174
Query: 183 PEVMEQLHGYDFKADIWSFGITALELAHGHAPF 215
PE++ Y F D W+ G+ E+ G +PF
Sbjct: 175 PEILRG-EDYGFSVDWWALGVLMFEMMAGRSPF 206
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 120/254 (47%), Gaps = 14/254 (5%)
Query: 14 TLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPNVLK 73
T+ ++G G V+ + ++ VAVK L + D ++ +EA M + HPN+++
Sbjct: 14 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL--KEDTMEVEEFLKEAAVMKEIKHPNLVQ 71
Query: 74 SHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHI 133
+ ++++ FM+ G+ L L+ VV+ + ++ ++YL I
Sbjct: 72 LLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFI 131
Query: 134 HRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYD 193
HRD+ + N L+ +K+ DFG+S + +GD W APE + + +
Sbjct: 132 HRDLAARNCLVGENHLVKVADFGLSRLM--TGDTXTAHAGAKFPIKWTAPESL-AYNKFS 188
Query: 194 FKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTLQNAPPGLDY--ERDRKFSKSFKQM 250
K+D+W+FG+ E+A +G +P+ P +V + + DY ER + ++
Sbjct: 189 IKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEK------DYRMERPEGCPEKVYEL 242
Query: 251 IASCLVKDPSKRPS 264
+ +C +PS RPS
Sbjct: 243 MRACWQWNPSDRPS 256
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 131/288 (45%), Gaps = 39/288 (13%)
Query: 17 EEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVD-HPNVLKSH 75
E +G+G A V A+ + + AVKI++ + +S S + RE +T+ + N+L+
Sbjct: 19 ELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSR-SRVFREVETLYQCQGNKNILELI 77
Query: 76 CSFVSDHNLWVVMPFMSGGSCL-HILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIH 134
F D ++V + GGS L HI K + F E + ++R+V LD+LH G H
Sbjct: 78 EFFEDDTRFYLVFEKLQGGSILAHIQKQKH---FNEREASRVVRDVAAALDFLHTKGIAH 134
Query: 135 RDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTF-------VGTPC----WMAP 183
RD+K NIL + + V C FD G ++ N+ + TPC +MAP
Sbjct: 135 RDLKPENILCESPEKVS----PVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAP 190
Query: 184 EVME----QLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKV--------------LL 225
EV+E Q YD + D+WS G+ + G+ PF + L
Sbjct: 191 EVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLF 250
Query: 226 MTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSF 273
++Q + S K +I+ LV+D +R SA ++L+H +
Sbjct: 251 ESIQEGKYEFPDKDWAHISSEAKDLISKLLVRDAKQRLSAAQVLQHPW 298
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 100/207 (48%), Gaps = 11/207 (5%)
Query: 68 HPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYL 127
H +V+ H F + ++VV+ S L + K E LR+++ G YL
Sbjct: 98 HQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYL 155
Query: 128 HHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVME 187
H + IHRD+K GN+ ++ +K+GDFG++ + G+R+++ GTP ++APEV+
Sbjct: 156 HRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGTPNYIAPEVLS 212
Query: 188 QLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSF 247
+ G+ F+ D+WS G L G PF + L +N +Y + +
Sbjct: 213 K-KGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN-----EYSIPKHINPVA 266
Query: 248 KQMIASCLVKDPSKRPSAKKLLKHSFF 274
+I L DP+ RP+ +LL FF
Sbjct: 267 ASLIQKMLQTDPTARPTINELLNDEFF 293
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 126/269 (46%), Gaps = 21/269 (7%)
Query: 13 YTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPNVL 72
Y + +G G + V A ++VA+K + E ++ E + + HPN++
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 73 KSHCSFVSDHNLWVVMPFMSGGSCL-HILKAAYPDGFEEVVIATILREVLKGLDYLHHHG 131
+ S +L+++M +SGG I++ + + E + ++ +VL + YLH G
Sbjct: 80 ALDDIYESGGHLYLIMQLVSGGELFDRIVEKGF---YTERDASRLIFQVLDAVKYLHDLG 136
Query: 132 HIHRDVKSGNIL---IDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQ 188
+HRD+K N+L +D I + DFG+S D + +T GTP ++APEV+ Q
Sbjct: 137 IVHRDLKPENLLYYSLDEDSKIMISDFGLSKM----EDPGSVLSTACGTPGYVAPEVLAQ 192
Query: 189 LHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKF----S 244
Y D WS G+ A L G+ PF K+ L+ +YE D + S
Sbjct: 193 -KPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKA-----EYEFDSPYWDDIS 246
Query: 245 KSFKQMIASCLVKDPSKRPSAKKLLKHSF 273
S K I + KDP KR + ++ L+H +
Sbjct: 247 DSAKDFIRHLMEKDPEKRFTCEQALQHPW 275
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 100/207 (48%), Gaps = 11/207 (5%)
Query: 68 HPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYL 127
H +V+ H F + ++VV+ S L + K E LR+++ G YL
Sbjct: 100 HQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYL 157
Query: 128 HHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVME 187
H + IHRD+K GN+ ++ +K+GDFG++ + G+R+++ GTP ++APEV+
Sbjct: 158 HRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGTPNYIAPEVLS 214
Query: 188 QLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSF 247
+ G+ F+ D+WS G L G PF + L +N +Y + +
Sbjct: 215 K-KGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN-----EYSIPKHINPVA 268
Query: 248 KQMIASCLVKDPSKRPSAKKLLKHSFF 274
+I L DP+ RP+ +LL FF
Sbjct: 269 ASLIQKMLQTDPTARPTINELLNDEFF 295
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 128/278 (46%), Gaps = 23/278 (8%)
Query: 2 DKKKYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKIL---DFERDNSDLSNISR 58
+ KK E + + +G+G +V+ A I+A+K+L E+ + + R
Sbjct: 16 ESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRR 74
Query: 59 EAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILR 118
E + + HPN+L+ + F +++++ + G+ L+ F+E AT +
Sbjct: 75 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYIT 132
Query: 119 EVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTP 178
E+ L Y H IHRD+K N+L+ G +K+ DFG S S R T GT
Sbjct: 133 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RRTTLCGTL 187
Query: 179 CWMAPEVME-QLHGYDFKADIWSFGITALELAHGHAPF--SKYPPMKVLLMTLQNAPPGL 235
++ PE++E ++H D K D+WS G+ E G PF + Y + ++ P
Sbjct: 188 DYLPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF 245
Query: 236 DYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSF 273
E R +I+ L +PS+RP +++L+H +
Sbjct: 246 VTEGAR-------DLISRLLKHNPSQRPMLREVLEHPW 276
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 126/274 (45%), Gaps = 23/274 (8%)
Query: 10 AEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHP 69
++ Y L +++G G NE+VAVK + ER +N+ RE + HP
Sbjct: 18 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYI--ERGEKIAANVKREIINHRSLRHP 75
Query: 70 NVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHH 129
N+++ ++ +L +VM + SGG + A F E ++++ G+ Y H
Sbjct: 76 NIVRFKEVILTPTHLAIVMEYASGGELFERICNA--GRFSEDEARFFFQQLISGVSYCHA 133
Query: 130 HGHIHRDVKSGNILIDVRGA--IKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVME 187
HRD+K N L+D A +K+ DFG S S + VGTP ++APEV+
Sbjct: 134 MQVCHRDLKLENTLLDGSPAPRLKICDFGYSK----SSVLHSQPKSTVGTPAYIAPEVLL 189
Query: 188 QLHGYDFK-ADIWSFGITALELAHGHAPFSKYPPMKVL------LMTLQNAPPGLDYERD 240
+ YD K AD+WS G+T + G PF K ++ +Q A P DY
Sbjct: 190 KKE-YDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIP--DYVH- 245
Query: 241 RKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSFF 274
S + +I+ V DP+KR S ++ H +F
Sbjct: 246 --ISPECRHLISRIFVADPAKRISIPEIRNHEWF 277
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 126/269 (46%), Gaps = 21/269 (7%)
Query: 13 YTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPNVL 72
Y + +G G + V A ++VA+K + E ++ E + + HPN++
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 73 KSHCSFVSDHNLWVVMPFMSGGSCL-HILKAAYPDGFEEVVIATILREVLKGLDYLHHHG 131
+ S +L+++M +SGG I++ + + E + ++ +VL + YLH G
Sbjct: 80 ALDDIYESGGHLYLIMQLVSGGELFDRIVEKGF---YTERDASRLIFQVLDAVKYLHDLG 136
Query: 132 HIHRDVKSGNIL---IDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQ 188
+HRD+K N+L +D I + DFG+S D + +T GTP ++APEV+ Q
Sbjct: 137 IVHRDLKPENLLYYSLDEDSKIMISDFGLSKM----EDPGSVLSTACGTPGYVAPEVLAQ 192
Query: 189 LHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKF----S 244
Y D WS G+ A L G+ PF K+ L+ +YE D + S
Sbjct: 193 -KPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKA-----EYEFDSPYWDDIS 246
Query: 245 KSFKQMIASCLVKDPSKRPSAKKLLKHSF 273
S K I + KDP KR + ++ L+H +
Sbjct: 247 DSAKDFIRHLMEKDPEKRFTCEQALQHPW 275
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 123/267 (46%), Gaps = 14/267 (5%)
Query: 1 MDKKKYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREA 60
M K+ + T+ ++G G V+ + ++ VAVK L + D ++ +EA
Sbjct: 1 MSLDKWEMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTL--KEDTMEVEEFLKEA 58
Query: 61 QTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREV 120
M + HPN+++ + +++ FM+ G+ L L+ VV+ + ++
Sbjct: 59 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQI 118
Query: 121 LKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCW 180
++YL IHRD+ + N L+ +K+ DFG+S + +GD W
Sbjct: 119 SSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM--TGDTXTAHAGAKFPIKW 176
Query: 181 MAPEVMEQLHGYDFKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTLQNAPPGLDY-- 237
APE + + + K+D+W+FG+ E+A +G +P+ P +V + + DY
Sbjct: 177 TAPESL-AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEK------DYRM 229
Query: 238 ERDRKFSKSFKQMIASCLVKDPSKRPS 264
ER + +++ +C +PS RPS
Sbjct: 230 ERPEGCPEKVYELMRACWQWNPSDRPS 256
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 126/269 (46%), Gaps = 21/269 (7%)
Query: 13 YTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPNVL 72
Y + +G G + V A ++VA+K + E ++ E + + HPN++
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 73 KSHCSFVSDHNLWVVMPFMSGGSCL-HILKAAYPDGFEEVVIATILREVLKGLDYLHHHG 131
+ S +L+++M +SGG I++ + + E + ++ +VL + YLH G
Sbjct: 80 ALDDIYESGGHLYLIMQLVSGGELFDRIVEKGF---YTERDASRLIFQVLDAVKYLHDLG 136
Query: 132 HIHRDVKSGNIL---IDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQ 188
+HRD+K N+L +D I + DFG+S D + +T GTP ++APEV+ Q
Sbjct: 137 IVHRDLKPENLLYYSLDEDSKIMISDFGLSKM----EDPGSVLSTACGTPGYVAPEVLAQ 192
Query: 189 LHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKF----S 244
Y D WS G+ A L G+ PF K+ L+ +YE D + S
Sbjct: 193 -KPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKA-----EYEFDSPYWDDIS 246
Query: 245 KSFKQMIASCLVKDPSKRPSAKKLLKHSF 273
S K I + KDP KR + ++ L+H +
Sbjct: 247 DSAKDFIRHLMEKDPEKRFTCEQALQHPW 275
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 130/278 (46%), Gaps = 25/278 (8%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISRE---AQTMIL-- 65
++Y EE+G G A V + A K + R S +SRE + IL
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 66 VDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLD 125
+ HPNV+ H + + ++ +++ ++GG L A + E L+++L G+
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVY 128
Query: 126 YLHHHGHIHRDVKSGNILIDVRGA----IKLGDFGVSACLFDSGDRQRMRNTFVGTPCWM 181
YLH H D+K NI++ R IK+ DFG++ + D G+ +N F GTP ++
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-DFGN--EFKNIF-GTPEFV 184
Query: 182 APEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYE-RD 240
APE++ +AD+WS G+ L G +PF + TL N ++YE D
Sbjct: 185 APEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE----TLANV-SAVNYEFED 238
Query: 241 RKFSKS---FKQMIASCLVKDPSKRPSAKKLLKHSFFK 275
FS + K I LVKDP KR + + L+H + K
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 129/279 (46%), Gaps = 23/279 (8%)
Query: 1 MDKKKYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKIL---DFERDNSDLSNIS 57
M+ KK E + + +G+G +V+ A I+A+K+L E+ + +
Sbjct: 1 MESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLR 59
Query: 58 REAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATIL 117
RE + + HPN+L+ + F +++++ + G+ L+ F+E AT +
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYI 117
Query: 118 REVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGT 177
E+ L Y H IHRD+K N+L+ G +K+ DFG S S R T GT
Sbjct: 118 TELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RRTTLCGT 172
Query: 178 PCWMAPEVME-QLHGYDFKADIWSFGITALELAHGHAPF--SKYPPMKVLLMTLQNAPPG 234
++ PE++E ++H D K D+WS G+ E G PF + Y + ++ P
Sbjct: 173 LDYLPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 230
Query: 235 LDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSF 273
E R +I+ L +PS+RP +++L+H +
Sbjct: 231 FVTEGAR-------DLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 109/237 (45%), Gaps = 25/237 (10%)
Query: 59 EAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILR 118
E + +V HP +++ +F ++++M ++ GG +L+ + F V
Sbjct: 56 ERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKS--QRFPNPVAKFYAA 113
Query: 119 EVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTP 178
EV L+YLH I+RD+K NIL+D G IK+ DFG + + D + GTP
Sbjct: 114 EVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD------VTYXLCGTP 167
Query: 179 CWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ---NAPPGL 235
++APEV+ Y+ D WSFGI E+ G+ PF MK L PP
Sbjct: 168 DYIAPEVVST-KPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPF- 225
Query: 236 DYERDRKFSKSFKQMIASCLVKDPSKR-----PSAKKLLKHSFFKQARSNEYIARTL 287
F++ K +++ + +D S+R + + H +FK+ + ++R +
Sbjct: 226 -------FNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEVVWEKLLSRNI 275
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 100/207 (48%), Gaps = 11/207 (5%)
Query: 68 HPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYL 127
H +V+ H F + ++VV+ S L + K E LR+++ G YL
Sbjct: 74 HQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYL 131
Query: 128 HHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVME 187
H + IHRD+K GN+ ++ +K+GDFG++ + G+R+++ GTP ++APEV+
Sbjct: 132 HRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGTPNYIAPEVLS 188
Query: 188 QLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSF 247
+ G+ F+ D+WS G L G PF + L +N +Y + +
Sbjct: 189 K-KGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN-----EYSIPKHINPVA 242
Query: 248 KQMIASCLVKDPSKRPSAKKLLKHSFF 274
+I L DP+ RP+ +LL FF
Sbjct: 243 ASLIQKMLQTDPTARPTINELLNDEFF 269
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 128/275 (46%), Gaps = 25/275 (9%)
Query: 10 AEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHP 69
++ Y L +++G G NE+VAVK + ER N+ RE + HP
Sbjct: 18 SDRYELVKDIGAGNFGVARLMRDKQANELVAVKYI--ERGEKIDENVKREIINHRSLRHP 75
Query: 70 NVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHH 129
N+++ ++ +L +VM + SGG + A F E ++++ G+ Y H
Sbjct: 76 NIVRFKEVILTPTHLAIVMEYASGGELFERICNA--GRFSEDEARFFFQQLISGVSYAHA 133
Query: 130 HGHIHRDVKSGNILIDVRGA--IKLGDFGVS-ACLFDSGDRQRMRNTFVGTPCWMAPEVM 186
HRD+K N L+D A +K+ DFG S A + S + + VGTP ++APEV+
Sbjct: 134 MQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPK-----SAVGTPAYIAPEVL 188
Query: 187 EQLHGYDFK-ADIWSFGITALELAHGHAPFSKYPPMKVL------LMTLQNAPPGLDYER 239
+ YD K AD+WS G+T + G PF K ++ +Q A P DY
Sbjct: 189 LK-KEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIP--DYVH 245
Query: 240 DRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSFF 274
S + +I+ V DP+KR S ++ H +F
Sbjct: 246 ---ISPECRHLISRIFVADPAKRISIPEIRNHEWF 277
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 111/218 (50%), Gaps = 9/218 (4%)
Query: 4 KKYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILD-FER-DNSDLSNISREAQ 61
K+ + E + + + +G+G V I A+KIL+ +E ++ + E
Sbjct: 83 KEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERD 142
Query: 62 TMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVL 121
++ D + H +F +++L++VM + GG L +L + + D E + + E++
Sbjct: 143 VLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLL-SKFEDKLPEDMARFYIGEMV 201
Query: 122 KGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWM 181
+D +H ++HRD+K N+L+DV G I+L DFG +CL + D + VGTP ++
Sbjct: 202 LAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFG--SCLKMNDDGTVQSSVAVGTPDYI 259
Query: 182 APEVMEQLHG----YDFKADIWSFGITALELAHGHAPF 215
+PE+++ + Y + D WS G+ E+ +G PF
Sbjct: 260 SPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPF 297
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 130/278 (46%), Gaps = 25/278 (8%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISRE---AQTMIL-- 65
++Y EE+G G A V + A K + R S +SRE + IL
Sbjct: 10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 69
Query: 66 VDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLD 125
+ HPNV+ H + + ++ +++ ++GG L A + E L+++L G+
Sbjct: 70 IQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVY 127
Query: 126 YLHHHGHIHRDVKSGNILIDVRGA----IKLGDFGVSACLFDSGDRQRMRNTFVGTPCWM 181
YLH H D+K NI++ R IK+ DFG++ + D G+ +N F GTP ++
Sbjct: 128 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-DFGN--EFKNIF-GTPEFV 183
Query: 182 APEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYE-RD 240
APE++ +AD+WS G+ L G +PF + TL N ++YE D
Sbjct: 184 APEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE----TLANV-SAVNYEFED 237
Query: 241 RKFSKS---FKQMIASCLVKDPSKRPSAKKLLKHSFFK 275
FS + K I LVKDP KR + + L+H + K
Sbjct: 238 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 275
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 111/218 (50%), Gaps = 9/218 (4%)
Query: 4 KKYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILD-FER-DNSDLSNISREAQ 61
K+ + E + + + +G+G V I A+KIL+ +E ++ + E
Sbjct: 67 KEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERD 126
Query: 62 TMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVL 121
++ D + H +F +++L++VM + GG L +L + + D E + + E++
Sbjct: 127 VLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLL-SKFEDKLPEDMARFYIGEMV 185
Query: 122 KGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWM 181
+D +H ++HRD+K N+L+DV G I+L DFG +CL + D + VGTP ++
Sbjct: 186 LAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFG--SCLKMNDDGTVQSSVAVGTPDYI 243
Query: 182 APEVMEQLHG----YDFKADIWSFGITALELAHGHAPF 215
+PE+++ + Y + D WS G+ E+ +G PF
Sbjct: 244 SPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPF 281
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 130/278 (46%), Gaps = 25/278 (8%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISRE---AQTMIL-- 65
++Y EE+G G A V + A K + R S +SRE + IL
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 66 VDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLD 125
+ HPNV+ H + + ++ +++ ++GG L A + E L+++L G+
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVY 128
Query: 126 YLHHHGHIHRDVKSGNILIDVRGA----IKLGDFGVSACLFDSGDRQRMRNTFVGTPCWM 181
YLH H D+K NI++ R IK+ DFG++ + D G+ +N F GTP ++
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-DFGN--EFKNIF-GTPEFV 184
Query: 182 APEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYE-RD 240
APE++ +AD+WS G+ L G +PF + TL N ++YE D
Sbjct: 185 APEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE----TLANV-SAVNYEFED 238
Query: 241 RKFSKS---FKQMIASCLVKDPSKRPSAKKLLKHSFFK 275
FS + K I LVKDP KR + + L+H + K
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 130/278 (46%), Gaps = 25/278 (8%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISRE---AQTMIL-- 65
++Y EE+G G A V + A K + R S +SRE + IL
Sbjct: 10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 69
Query: 66 VDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLD 125
+ HPNV+ H + + ++ +++ ++GG L A + E L+++L G+
Sbjct: 70 IQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVY 127
Query: 126 YLHHHGHIHRDVKSGNILIDVRGA----IKLGDFGVSACLFDSGDRQRMRNTFVGTPCWM 181
YLH H D+K NI++ R IK+ DFG++ + D G+ +N F GTP ++
Sbjct: 128 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-DFGN--EFKNIF-GTPEFV 183
Query: 182 APEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYE-RD 240
APE++ +AD+WS G+ L G +PF + TL N ++YE D
Sbjct: 184 APEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE----TLANV-SAVNYEFED 237
Query: 241 RKFSKS---FKQMIASCLVKDPSKRPSAKKLLKHSFFK 275
FS + K I LVKDP KR + + L+H + K
Sbjct: 238 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 275
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 130/278 (46%), Gaps = 25/278 (8%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISRE---AQTMIL-- 65
++Y EE+G G A V + A K + R S +SRE + IL
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 66 VDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLD 125
+ HPNV+ H + + ++ +++ ++GG L A + E L+++L G+
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVY 128
Query: 126 YLHHHGHIHRDVKSGNILIDVRGA----IKLGDFGVSACLFDSGDRQRMRNTFVGTPCWM 181
YLH H D+K NI++ R IK+ DFG++ + D G+ +N F GTP ++
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-DFGN--EFKNIF-GTPEFV 184
Query: 182 APEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYE-RD 240
APE++ +AD+WS G+ L G +PF + TL N ++YE D
Sbjct: 185 APEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE----TLANV-SAVNYEFED 238
Query: 241 RKFSKS---FKQMIASCLVKDPSKRPSAKKLLKHSFFK 275
FS + K I LVKDP KR + + L+H + K
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 130/278 (46%), Gaps = 25/278 (8%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISRE---AQTMIL-- 65
++Y EE+G G A V + A K + R S +SRE + IL
Sbjct: 11 DYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 66 VDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLD 125
+ HPNV+ H + + ++ +++ ++GG L A + E L+++L G+
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVY 128
Query: 126 YLHHHGHIHRDVKSGNILIDVRGA----IKLGDFGVSACLFDSGDRQRMRNTFVGTPCWM 181
YLH H D+K NI++ R IK+ DFG++ + D G+ +N F GTP ++
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-DFGN--EFKNIF-GTPEFV 184
Query: 182 APEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYE-RD 240
APE++ +AD+WS G+ L G +PF + TL N ++YE D
Sbjct: 185 APEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE----TLANV-SAVNYEFED 238
Query: 241 RKFSKS---FKQMIASCLVKDPSKRPSAKKLLKHSFFK 275
FS + K I LVKDP KR + + L+H + K
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 123/267 (46%), Gaps = 14/267 (5%)
Query: 1 MDKKKYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREA 60
M K+ + T+ ++G G V+ + ++ VAVK L + D ++ +EA
Sbjct: 1 MSLDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL--KEDTMEVEEFLKEA 58
Query: 61 QTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREV 120
M + HPN+++ + +++ FM+ G+ L L+ VV+ + ++
Sbjct: 59 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQI 118
Query: 121 LKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCW 180
++YL IHRD+ + N L+ +K+ DFG+S + +GD W
Sbjct: 119 SSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM--TGDTFTAHAGAKFPIKW 176
Query: 181 MAPEVMEQLHGYDFKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTLQNAPPGLDY-- 237
APE + + + K+D+W+FG+ E+A +G +P+ P +V + + DY
Sbjct: 177 TAPESL-AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEK------DYRM 229
Query: 238 ERDRKFSKSFKQMIASCLVKDPSKRPS 264
ER + +++ +C +PS RPS
Sbjct: 230 ERPEGCPEKVYELMRACWQWNPSDRPS 256
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 130/278 (46%), Gaps = 25/278 (8%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISRE---AQTMIL-- 65
++Y EE+G G A V + A K + R S +SRE + IL
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 66 VDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLD 125
+ HPNV+ H + + ++ +++ ++GG L A + E L+++L G+
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVY 128
Query: 126 YLHHHGHIHRDVKSGNILIDVRGA----IKLGDFGVSACLFDSGDRQRMRNTFVGTPCWM 181
YLH H D+K NI++ R IK+ DFG++ + D G+ +N F GTP ++
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-DFGN--EFKNIF-GTPEFV 184
Query: 182 APEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYE-RD 240
APE++ +AD+WS G+ L G +PF + TL N ++YE D
Sbjct: 185 APEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE----TLANV-SAVNYEFED 238
Query: 241 RKFSKS---FKQMIASCLVKDPSKRPSAKKLLKHSFFK 275
FS + K I LVKDP KR + + L+H + K
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 129/275 (46%), Gaps = 15/275 (5%)
Query: 10 AEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHP 69
++ + + E+G+G ++ V+R + A+K+L + D + E ++ + HP
Sbjct: 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVL---KKTVDKKIVRTEIGVLLRLSHP 108
Query: 70 NVLKSHCSFVSDHNLWVVMPFMSGGSCL-HILKAAYPDGFEEVVIATILREVLKGLDYLH 128
N++K F + + +V+ ++GG I++ Y + E A ++++L+ + YLH
Sbjct: 109 NIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGY---YSERDAADAVKQILEAVAYLH 165
Query: 129 HHGHIHRDVKSGNILIDV---RGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEV 185
+G +HRD+K N+L +K+ DFG+S + + Q + T GTP + APE+
Sbjct: 166 ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIV----EHQVLMKTVCGTPGYCAPEI 221
Query: 186 MEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSK 245
+ Y + D+WS GI L G PF + + + N + S
Sbjct: 222 LRGC-AYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSL 280
Query: 246 SFKQMIASCLVKDPSKRPSAKKLLKHSFFKQARSN 280
+ K ++ +V DP KR + + L+H + +N
Sbjct: 281 NAKDLVRKLIVLDPKKRLTTFQALQHPWVTGKAAN 315
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 120/266 (45%), Gaps = 14/266 (5%)
Query: 19 VGQGVSASVHRALCIPFNEIVAVKILDFE--RDNSDLSNISREAQTMILVDHPNVLKSHC 76
+G+G A V+RA I VA+K++D + + + E + + HP++L+ +
Sbjct: 19 LGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYN 78
Query: 77 SFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRD 136
F + +++V+ G LK F E + +++ G+ YLH HG +HRD
Sbjct: 79 YFEDSNYVYLVLEMCHNGEMNRYLKNRVKP-FSENEARHFMHQIITGMLYLHSHGILHRD 137
Query: 137 VKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQ-LHGYDFK 195
+ N+L+ IK+ DFG++ L ++ T GTP +++PE+ + HG +
Sbjct: 138 LTLSNLLLTRNMNIKIADFGLATQLKMPHEKHY---TLCGTPNYISPEIATRSAHG--LE 192
Query: 196 ADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCL 255
+D+WS G L G PF L N DYE S K +I L
Sbjct: 193 SDVWSLGCMFYTLLIGRPPFDTDTVKNTL-----NKVVLADYEMPSFLSIEAKDLIHQLL 247
Query: 256 VKDPSKRPSAKKLLKHSFFKQARSNE 281
++P+ R S +L H F + S +
Sbjct: 248 RRNPADRLSLSSVLDHPFMSRNSSTK 273
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 140/291 (48%), Gaps = 32/291 (10%)
Query: 13 YTLYEEV-GQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVD-HPN 70
Y L E+V G+G A V + + ++ AVKI++ ++ S + RE + + H N
Sbjct: 14 YQLQEDVLGEGAHARVQTCINLITSQEYAVKIIE-KQPGHIRSRVFREVEMLYQCQGHRN 72
Query: 71 VLKSHCSFVSDHNLWVVMPFMSGGSCL-HILKAAYPDGFEEVVIATILREVLKGLDYLHH 129
VL+ F + ++V M GGS L HI K + F E+ + ++++V LD+LH+
Sbjct: 73 VLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRH---FNELEASVVVQDVASALDFLHN 129
Query: 130 HGHIHRDVKSGNILID---VRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPC----WMA 182
G HRD+K NIL + +K+ DFG+ + + +GD + + TPC +MA
Sbjct: 130 KGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMA 189
Query: 183 PEVMEQLHG----YDFKADIWSFGITALELAHGHAPF-------------SKYPPMKVLL 225
PEV+E YD + D+WS G+ L G+ PF P + +L
Sbjct: 190 PEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNML 249
Query: 226 M-TLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSFFK 275
++Q + S + K +I+ LV+D +R SA ++L+H + +
Sbjct: 250 FESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQ 300
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 130/264 (49%), Gaps = 18/264 (6%)
Query: 17 EEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPNVLKSHC 76
E +G G VH+ +A KI+ R D + E M +DH N+++ +
Sbjct: 95 EILGGGRFGQVHKCEETATGLKLAAKIIK-TRGMKDKEEVKNEISVMNQLDHANLIQLYD 153
Query: 77 SFVSDHNLWVVMPFMSGGSCL-HILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHR 135
+F S +++ +VM ++ GG I+ +Y E+ ++++ +G+ ++H +H
Sbjct: 154 AFESKNDIVLVMEYVDGGELFDRIIDESY--NLTELDTILFMKQICEGIRHMHQMYILHL 211
Query: 136 DVKSGNILIDVRGA--IKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYD 193
D+K NIL R A IK+ DFG++ R++++ F GTP ++APEV+ YD
Sbjct: 212 DLKPENILCVNRDAKQIKIIDFGLARRY---KPREKLKVNF-GTPEFLAPEVV----NYD 263
Query: 194 FKA---DIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQM 250
F + D+WS G+ A L G +PF + L L L+ E + S+ K+
Sbjct: 264 FVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILA-CRWDLEDEEFQDISEEAKEF 322
Query: 251 IASCLVKDPSKRPSAKKLLKHSFF 274
I+ L+K+ S R SA + LKH +
Sbjct: 323 ISKLLIKEKSWRISASEALKHPWL 346
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 126/269 (46%), Gaps = 21/269 (7%)
Query: 13 YTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPNVL 72
Y + +G G + V A ++VA+K + + ++ E + + HPN++
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 73 KSHCSFVSDHNLWVVMPFMSGGSCL-HILKAAYPDGFEEVVIATILREVLKGLDYLHHHG 131
+ S +L+++M +SGG I++ + + E + ++ +VL + YLH G
Sbjct: 80 ALDDIYESGGHLYLIMQLVSGGELFDRIVEKGF---YTERDASRLIFQVLDAVKYLHDLG 136
Query: 132 HIHRDVKSGNIL---IDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQ 188
+HRD+K N+L +D I + DFG+S D + +T GTP ++APEV+ Q
Sbjct: 137 IVHRDLKPENLLYYSLDEDSKIMISDFGLSKM----EDPGSVLSTACGTPGYVAPEVLAQ 192
Query: 189 LHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKF----S 244
Y D WS G+ A L G+ PF K+ L+ +YE D + S
Sbjct: 193 -KPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKA-----EYEFDSPYWDDIS 246
Query: 245 KSFKQMIASCLVKDPSKRPSAKKLLKHSF 273
S K I + KDP KR + ++ L+H +
Sbjct: 247 DSAKDFIRHLMEKDPEKRFTCEQALQHPW 275
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 128/276 (46%), Gaps = 23/276 (8%)
Query: 4 KKYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKIL---DFERDNSDLSNISREA 60
KK E + + +G+G +V+ A I+A+K+L E+ + + RE
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREV 60
Query: 61 QTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREV 120
+ + HPN+L+ + F +++++ + G+ L+ F+E AT + E+
Sbjct: 61 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITEL 118
Query: 121 LKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCW 180
L Y H IHRD+K N+L+ G +K+ DFG S S R+T GT +
Sbjct: 119 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RRDTLCGTLDY 173
Query: 181 MAPEVME-QLHGYDFKADIWSFGITALELAHGHAPF--SKYPPMKVLLMTLQNAPPGLDY 237
+ PE++E ++H D K D+WS G+ E G PF + Y + ++ P
Sbjct: 174 LPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVT 231
Query: 238 ERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSF 273
E R +I+ L +PS+RP +++L+H +
Sbjct: 232 EGAR-------DLISRLLKHNPSQRPMLREVLEHPW 260
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 129/284 (45%), Gaps = 35/284 (12%)
Query: 2 DKKKYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKIL---DFERDNSDLSNISR 58
+ KK E + + +G+G +V+ A I+A+K+L E+ + + R
Sbjct: 25 ESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRR 83
Query: 59 EAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILR 118
E + + HPN+L+ + F +++++ + G+ L+ F+E AT +
Sbjct: 84 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYIT 141
Query: 119 EVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTP 178
E+ L Y H IHRD+K N+L+ G +K+ DFG S S R+ GT
Sbjct: 142 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RRDDLCGTL 196
Query: 179 CWMAPEVME-QLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDY 237
++ PE++E ++H D K D+WS G+ E G PF T Q Y
Sbjct: 197 DYLPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGKPPFEA--------NTYQET-----Y 241
Query: 238 ERDRKFSKSF--------KQMIASCLVKDPSKRPSAKKLLKHSF 273
+R + +F + +I+ L +PS+RP +++L+H +
Sbjct: 242 KRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 285
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 130/285 (45%), Gaps = 35/285 (12%)
Query: 1 MDKKKYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKIL---DFERDNSDLSNIS 57
M+ KK E + + +G+G +V+ A I+A+K+L E+ + +
Sbjct: 1 MESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLR 59
Query: 58 REAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATIL 117
RE + + HPN+L+ + F +++++ + G+ L+ F+E AT +
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYI 117
Query: 118 REVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGT 177
E+ L Y H IHRD+K N+L+ G +K+ +FG S S R T GT
Sbjct: 118 TELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSS-----RRTTLCGT 172
Query: 178 PCWMAPEVME-QLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLD 236
++ PE++E ++H D K D+WS G+ E G PF T Q
Sbjct: 173 LDYLPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGKPPFEA--------NTYQET----- 217
Query: 237 YERDRKFSKSF--------KQMIASCLVKDPSKRPSAKKLLKHSF 273
Y+R + +F + +I+ L +PS+RP +++L+H +
Sbjct: 218 YKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 125/274 (45%), Gaps = 23/274 (8%)
Query: 10 AEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHP 69
++ Y L +++G G NE+VAVK + ER N+ RE + HP
Sbjct: 17 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYI--ERGEKIDENVKREIINHRSLRHP 74
Query: 70 NVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHH 129
N+++ ++ +L +VM + SGG + A F E ++++ G+ Y H
Sbjct: 75 NIVRFKEVILTPTHLAIVMEYASGGELFERICNA--GRFSEDEARFFFQQLISGVSYCHA 132
Query: 130 HGHIHRDVKSGNILIDVRGA--IKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVME 187
HRD+K N L+D A +K+ DFG S S + VGTP ++APEV+
Sbjct: 133 MQVCHRDLKLENTLLDGSPAPRLKICDFGYSK----SSVLHSQPKSTVGTPAYIAPEVLL 188
Query: 188 QLHGYDFK-ADIWSFGITALELAHGHAPFSKYPPMKVL------LMTLQNAPPGLDYERD 240
+ YD K AD+WS G+T + G PF K ++ +Q A P DY
Sbjct: 189 K-KEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIP--DYVH- 244
Query: 241 RKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSFF 274
S + +I+ V DP+KR S ++ H +F
Sbjct: 245 --ISPECRHLISRIFVADPAKRISIPEIRNHEWF 276
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 125/277 (45%), Gaps = 21/277 (7%)
Query: 2 DKKKYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKIL---DFERDNSDLSNISR 58
+ KK E + + +G+G +V+ A I+A+K+L E+ + + R
Sbjct: 4 ESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRR 62
Query: 59 EAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILR 118
E + + HPN+L+ + F +++++ + G+ L+ F+E AT +
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYIT 120
Query: 119 EVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTP 178
E+ L Y H IHRD+K N+L+ G +K+ DFG S S R T GT
Sbjct: 121 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RRTTLCGTL 175
Query: 179 CWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPF--SKYPPMKVLLMTLQNAPPGLD 236
++ PE +E +D K D+WS G+ E G PF + Y + ++ P
Sbjct: 176 DYLPPEXIEG-RXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV 234
Query: 237 YERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSF 273
E R +I+ L +PS+RP +++L+H +
Sbjct: 235 TEGAR-------DLISRLLKHNPSQRPXLREVLEHPW 264
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 126/270 (46%), Gaps = 21/270 (7%)
Query: 17 EEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDL-SNISREAQTMILVDH-PNVLKS 74
+E+G+G A V + + + A K L R D + I E + L P V+
Sbjct: 35 KELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINL 94
Query: 75 HCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIH 134
H + + + +++ + +GG + + E + +++++L+G+ YLH + +H
Sbjct: 95 HEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVH 154
Query: 135 RDVKSGNILIDV---RGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHG 191
D+K NIL+ G IK+ DFG+S + G +R +GTP ++APE++
Sbjct: 155 LDLKPQNILLSSIYPLGDIKIVDFGMSRKI---GHACELRE-IMGTPEYLAPEIL----N 206
Query: 192 YD---FKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDY--ERDRKFSKS 246
YD D+W+ GI A L +PF + L Q +DY E S+
Sbjct: 207 YDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQ---VNVDYSEETFSSVSQL 263
Query: 247 FKQMIASCLVKDPSKRPSAKKLLKHSFFKQ 276
I S LVK+P KRP+A+ L HS+ +Q
Sbjct: 264 ATDFIQSLLVKNPEKRPTAEICLSHSWLQQ 293
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 127/279 (45%), Gaps = 23/279 (8%)
Query: 1 MDKKKYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKIL---DFERDNSDLSNIS 57
M+ KK E + + +G+G +V+ A I+A+K+L E+ + +
Sbjct: 3 MESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLR 61
Query: 58 REAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATIL 117
RE + + HPN+L+ + F +++++ + G L+ F+E AT +
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKL--SKFDEQRTATYI 119
Query: 118 REVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGT 177
E+ L Y H IHRD+K N+L+ G +K+ DFG S S R GT
Sbjct: 120 TELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RRXXLXGT 174
Query: 178 PCWMAPEVME-QLHGYDFKADIWSFGITALELAHGHAPF--SKYPPMKVLLMTLQNAPPG 234
++ PE++E ++H D K D+WS G+ E G PF + Y + ++ P
Sbjct: 175 LDYLPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 232
Query: 235 LDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSF 273
E R +I+ L +PS+RP +++L+H +
Sbjct: 233 FVTEGAR-------DLISRLLKHNPSQRPMLREVLEHPW 264
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 128/276 (46%), Gaps = 23/276 (8%)
Query: 4 KKYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKIL---DFERDNSDLSNISREA 60
KK E + + +G+G +V+ A I+A+K+L E+ + + RE
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREV 60
Query: 61 QTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREV 120
+ + HPN+L+ + F +++++ + G+ L+ F+E AT + E+
Sbjct: 61 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITEL 118
Query: 121 LKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCW 180
L Y H IHRD+K N+L+ G +K+ DFG S C S R T GT +
Sbjct: 119 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-CHAPSS----RRTTLSGTLDY 173
Query: 181 MAPEVME-QLHGYDFKADIWSFGITALELAHGHAPF--SKYPPMKVLLMTLQNAPPGLDY 237
+ PE++E ++H D K D+WS G+ E G PF + Y + ++ P
Sbjct: 174 LPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVT 231
Query: 238 ERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSF 273
E R +I+ L +PS+RP +++L+H +
Sbjct: 232 EGAR-------DLISRLLKHNPSQRPMLREVLEHPW 260
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 112/242 (46%), Gaps = 16/242 (6%)
Query: 52 DLSNISREAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEV 111
++++ E++ + HP + +F + L VM + +GG L F E
Sbjct: 48 EVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERV--FTEE 105
Query: 112 VIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMR 171
E++ L+YLH ++RD+K N+++D G IK+ DFG+ C D M+
Sbjct: 106 RARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGL--CKEGISDGATMK 163
Query: 172 NTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNA 231
TF GTP ++APEV+E + Y D W G+ E+ G PF ++ + L
Sbjct: 164 -TFCGTPEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILME- 220
Query: 232 PPGLDYERDRKFSKSFKQMIASCLVKDPSKR----PS-AKKLLKHSFFKQARSNEYIART 286
+ R S K ++A L KDP +R PS AK++++H FF + + +
Sbjct: 221 ----EIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKK 276
Query: 287 LL 288
LL
Sbjct: 277 LL 278
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 113/242 (46%), Gaps = 16/242 (6%)
Query: 52 DLSNISREAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEV 111
++++ E++ + HP + +F + L VM + +GG L + F E
Sbjct: 51 EVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL--SRERVFTEE 108
Query: 112 VIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMR 171
E++ L+YLH ++RD+K N+++D G IK+ DFG+ C D M+
Sbjct: 109 RARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGL--CKEGISDGATMK 166
Query: 172 NTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNA 231
TF GTP ++APEV+E + Y D W G+ E+ G PF ++ + L
Sbjct: 167 -TFCGTPEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILME- 223
Query: 232 PPGLDYERDRKFSKSFKQMIASCLVKDPSKR----PS-AKKLLKHSFFKQARSNEYIART 286
+ R S K ++A L KDP +R PS AK++++H FF + + +
Sbjct: 224 ----EIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKK 279
Query: 287 LL 288
LL
Sbjct: 280 LL 281
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 112/242 (46%), Gaps = 16/242 (6%)
Query: 52 DLSNISREAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEV 111
++++ E++ + HP + +F + L VM + +GG L F E
Sbjct: 48 EVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERV--FTEE 105
Query: 112 VIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMR 171
E++ L+YLH ++RD+K N+++D G IK+ DFG+ C D M+
Sbjct: 106 RARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGL--CKEGISDGATMK 163
Query: 172 NTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNA 231
TF GTP ++APEV+E + Y D W G+ E+ G PF ++ + L
Sbjct: 164 -TFCGTPEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILME- 220
Query: 232 PPGLDYERDRKFSKSFKQMIASCLVKDPSKR----PS-AKKLLKHSFFKQARSNEYIART 286
+ R S K ++A L KDP +R PS AK++++H FF + + +
Sbjct: 221 ----EIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKK 276
Query: 287 LL 288
LL
Sbjct: 277 LL 278
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 107/221 (48%), Gaps = 10/221 (4%)
Query: 12 HYTLYEEVGQGVSASVHRALCIPF----NEIVAVKILDFERDNSDLSNISREAQTMILVD 67
H +++G+G SV P E+VAVK L + L + RE + + +
Sbjct: 14 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH-LRDFEREIEILKSLQ 72
Query: 68 HPNVLKSH--CSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLD 125
H N++K C NL ++M ++ GS L+A + + + + + ++ KG++
Sbjct: 73 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQA-HAERIDHIKLLQYTSQICKGME 131
Query: 126 YLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEV 185
YL +IHRD+ + NIL++ +K+GDFG++ L + +++ W APE
Sbjct: 132 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 191
Query: 186 MEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLM 226
+ + + +D+WSFG+ EL + SK PP + + M
Sbjct: 192 LTE-SKFSVASDVWSFGVVLYEL-FTYIEKSKSPPAEFMRM 230
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 124/275 (45%), Gaps = 18/275 (6%)
Query: 7 PIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDF-ERDNSDLSNISREAQTMIL 65
P AE Y + +G G + +I+ K LD+ ++ + E +
Sbjct: 2 PSRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRE 61
Query: 66 VDHPNVLKSHCSFVSDHN--LWVVMPFMSGGSCLHILKAAYPDG--FEEVVIATILREVL 121
+ HPN+++ + + N L++VM + GG ++ + +E + ++ ++
Sbjct: 62 LKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLT 121
Query: 122 KGLDYLHHH---GH--IHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVG 176
L H GH +HRD+K N+ +D + +KLGDFG++ L TFVG
Sbjct: 122 LALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL---NHDTSFAKTFVG 178
Query: 177 TPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLD 236
TP +M+PE M ++ Y+ K+DIWS G EL PF+ + ++ + +
Sbjct: 179 TPYYMSPEQMNRM-SYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIP 237
Query: 237 YERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKH 271
Y ++S ++I L RPS +++L++
Sbjct: 238 Y----RYSDELNEIITRMLNLKDYHRPSVEEILEN 268
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 124/275 (45%), Gaps = 18/275 (6%)
Query: 7 PIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDF-ERDNSDLSNISREAQTMIL 65
P AE Y + +G G + +I+ K LD+ ++ + E +
Sbjct: 2 PSRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRE 61
Query: 66 VDHPNVLKSHCSFVSDHN--LWVVMPFMSGGSCLHILKAAYPDG--FEEVVIATILREVL 121
+ HPN+++ + + N L++VM + GG ++ + +E + ++ ++
Sbjct: 62 LKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLT 121
Query: 122 KGLDYLHHH---GH--IHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVG 176
L H GH +HRD+K N+ +D + +KLGDFG++ L D FVG
Sbjct: 122 LALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDED---FAKEFVG 178
Query: 177 TPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLD 236
TP +M+PE M ++ Y+ K+DIWS G EL PF+ + ++ + +
Sbjct: 179 TPYYMSPEQMNRM-SYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIP 237
Query: 237 YERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKH 271
Y ++S ++I L RPS +++L++
Sbjct: 238 Y----RYSDELNEIITRMLNLKDYHRPSVEEILEN 268
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 129/278 (46%), Gaps = 25/278 (8%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISRE---AQTMIL-- 65
++Y EE+G G A V + A K + R S +SRE + IL
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 66 VDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLD 125
+ HPNV+ H + + ++ ++ ++GG L A + E L+++L G+
Sbjct: 71 IQHPNVITLHEVYENKTDVILIGELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVY 128
Query: 126 YLHHHGHIHRDVKSGNILIDVRGA----IKLGDFGVSACLFDSGDRQRMRNTFVGTPCWM 181
YLH H D+K NI++ R IK+ DFG++ + D G+ +N F GTP ++
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-DFGN--EFKNIF-GTPEFV 184
Query: 182 APEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYE-RD 240
APE++ +AD+WS G+ L G +PF + TL N ++YE D
Sbjct: 185 APEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE----TLANV-SAVNYEFED 238
Query: 241 RKFSKS---FKQMIASCLVKDPSKRPSAKKLLKHSFFK 275
FS + K I LVKDP KR + + L+H + K
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 116/252 (46%), Gaps = 10/252 (3%)
Query: 14 TLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPNVLK 73
T+ ++G G V+ + ++ VAVK L + D ++ +EA M + HPN+++
Sbjct: 17 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL--KEDTMEVEEFLKEAAVMKEIKHPNLVQ 74
Query: 74 SHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHI 133
+ ++++ FM+ G+ L L+ VV+ + ++ ++YL I
Sbjct: 75 LLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFI 134
Query: 134 HRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYD 193
HRD+ + N L+ +K+ DFG+S + +GD W APE + + +
Sbjct: 135 HRDLAARNCLVGENHLVKVADFGLSRLM--TGDTXTAHAGAKFPIKWTAPESL-AYNKFS 191
Query: 194 FKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIA 252
K+D+W+FG+ E+A +G +P+ P L + ER + +++
Sbjct: 192 IKSDVWAFGVLLWEIATYGMSPY----PGIDLSQVYELLEKDYRMERPEGCPEKVYELMR 247
Query: 253 SCLVKDPSKRPS 264
+C +PS RPS
Sbjct: 248 ACWQWNPSDRPS 259
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 129/285 (45%), Gaps = 35/285 (12%)
Query: 1 MDKKKYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKIL---DFERDNSDLSNIS 57
M+ KK E + + +G+G +V+ A I+A+K+L E+ + +
Sbjct: 1 MESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLR 59
Query: 58 REAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATIL 117
RE + + HPN+L+ + F +++++ + G+ L+ F+E AT +
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYI 117
Query: 118 REVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGT 177
E+ L Y H IHRD+K N+L+ G +K+ DFG S S R GT
Sbjct: 118 TELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RRXXLCGT 172
Query: 178 PCWMAPEVME-QLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLD 236
++ PE++E ++H D K D+WS G+ E G PF T Q
Sbjct: 173 LDYLPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGKPPFEA--------NTYQET----- 217
Query: 237 YERDRKFSKSF--------KQMIASCLVKDPSKRPSAKKLLKHSF 273
Y+R + +F + +I+ L +PS+RP +++L+H +
Sbjct: 218 YKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 128/278 (46%), Gaps = 23/278 (8%)
Query: 2 DKKKYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKIL---DFERDNSDLSNISR 58
+ KK E + + +G+G +V+ A I+A+K+L E+ + + R
Sbjct: 1 ESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRR 59
Query: 59 EAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILR 118
E + + HPN+L+ + F +++++ + G+ L+ F+E AT +
Sbjct: 60 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYIT 117
Query: 119 EVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTP 178
E+ L Y H IHRD+K N+L+ G +K+ +FG S S R T GT
Sbjct: 118 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSS-----RRTTLCGTL 172
Query: 179 CWMAPEVME-QLHGYDFKADIWSFGITALELAHGHAPF--SKYPPMKVLLMTLQNAPPGL 235
++ PE++E ++H D K D+WS G+ E G PF + Y + ++ P
Sbjct: 173 DYLPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF 230
Query: 236 DYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSF 273
E R +I+ L +PS+RP +++L+H +
Sbjct: 231 VTEGAR-------DLISRLLKHNPSQRPMLREVLEHPW 261
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 105/221 (47%), Gaps = 10/221 (4%)
Query: 12 HYTLYEEVGQGVSASVHRALCIPF----NEIVAVKILDFERDNSDLSNISREAQTMILVD 67
H ++G+G SV P E+VAVK L + L + RE + + +
Sbjct: 14 HLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH-LRDFEREIEILKSLQ 72
Query: 68 HPNVLKSH--CSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLD 125
H N++K C NL ++M F+ GS L+ + + + + + ++ KG++
Sbjct: 73 HDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQK-HKERIDHIKLLQYTSQICKGME 131
Query: 126 YLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEV 185
YL +IHRD+ + NIL++ +K+GDFG++ L + +++ W APE
Sbjct: 132 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 191
Query: 186 MEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLM 226
+ + + +D+WSFG+ EL + SK PP + + M
Sbjct: 192 LTE-SKFSVASDVWSFGVVLYEL-FTYIEKSKSPPAEFMRM 230
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 125/269 (46%), Gaps = 23/269 (8%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKIL---DFERDNSDLSNISREAQTMILVD 67
E + + +G+G +V+ A I+A+K+L E+ + + RE + +
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLR 66
Query: 68 HPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYL 127
HPN+L+ + F +++++ + G+ L+ F+E AT + E+ L Y
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYC 124
Query: 128 HHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVME 187
H IHRD+K N+L+ G +K+ DFG S S R T GT ++ PE++E
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RRTTLCGTLDYLPPEMIE 179
Query: 188 -QLHGYDFKADIWSFGITALELAHGHAPF--SKYPPMKVLLMTLQNAPPGLDYERDRKFS 244
++H D K D+WS G+ E G PF + Y + ++ P E R
Sbjct: 180 GRMH--DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGAR--- 234
Query: 245 KSFKQMIASCLVKDPSKRPSAKKLLKHSF 273
+I+ L +PS+RP +++L+H +
Sbjct: 235 ----DLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 123/266 (46%), Gaps = 19/266 (7%)
Query: 19 VGQGVSASVHRALCIPFNEIVAVKIL--DFERDNSDLSNISREAQTMILVDHPNVLKS-H 75
+G+G V A E+ A+KIL D + D+ E + + L+D P L H
Sbjct: 27 LGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQLH 86
Query: 76 CSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHR 135
F + L+ VM +++GG ++ ++ F+E E+ GL +LH G I+R
Sbjct: 87 SCFQTVDRLYFVMEYVNGGDLMYHIQQV--GKFKEPQAVFYAAEISIGLFFLHKRGIIYR 144
Query: 136 DVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFK 195
D+K N+++D G IK+ DFG+ G R F GTP ++APE++ Y
Sbjct: 145 DLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTR---EFCGTPDYIAPEII-AYQPYGKS 200
Query: 196 ADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCL 255
D W++G+ E+ G PF ++ +++ + + SK + +
Sbjct: 201 VDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEH-----NVSYPKSLSKEAVSICKGLM 255
Query: 256 VKDPSKR----PSAKK-LLKHSFFKQ 276
K P+KR P ++ + +H+FF++
Sbjct: 256 TKHPAKRLGCGPEGERDVREHAFFRR 281
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 119/271 (43%), Gaps = 16/271 (5%)
Query: 1 MDKKKYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREA 60
+ K + I E L ++GQG V +N V I + N +EA
Sbjct: 175 LAKDAWEIPRESLRLEVKLGQGCFGEVWMGT---WNGTTRVAIKTLKPGNMSPEAFLQEA 231
Query: 61 QTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREV 120
Q M + H +++ + + VS+ +++V +MS GS L LK + + ++
Sbjct: 232 QVMKKLRHEKLVQLY-AVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQI 290
Query: 121 LKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPC- 179
G+ Y+ ++HRD+++ NIL+ K+ DFG+ + D+ R F P
Sbjct: 291 ASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKF---PIK 347
Query: 180 WMAPEVMEQLHG-YDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLDY 237
W APE L+G + K+D+WSFGI EL G P YP M V L G
Sbjct: 348 WTAPEAA--LYGRFTIKSDVWSFGILLTELTTKGRVP---YPGM-VNREVLDQVERGYRM 401
Query: 238 ERDRKFSKSFKQMIASCLVKDPSKRPSAKKL 268
+ +S ++ C KDP +RP+ + L
Sbjct: 402 PCPPECPESLHDLMCQCWRKDPEERPTFEYL 432
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 116/252 (46%), Gaps = 10/252 (3%)
Query: 14 TLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPNVLK 73
T+ ++G G V+ + ++ VAVK L + D ++ +EA M + HPN+++
Sbjct: 16 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL--KEDTMEVEEFLKEAAVMKEIKHPNLVQ 73
Query: 74 SHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHI 133
+ ++++ FM+ G+ L L+ VV+ + ++ ++YL I
Sbjct: 74 LLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFI 133
Query: 134 HRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYD 193
HRD+ + N L+ +K+ DFG+S + +GD W APE + + +
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAHAGAKFPIKWTAPESL-AYNKFS 190
Query: 194 FKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIA 252
K+D+W+FG+ E+A +G +P+ P L + ER + +++
Sbjct: 191 IKSDVWAFGVLLWEIATYGMSPY----PGIDLSQVYELLEKDYRMERPEGCPEKVYELMR 246
Query: 253 SCLVKDPSKRPS 264
+C +PS RPS
Sbjct: 247 ACWQWNPSDRPS 258
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 116/252 (46%), Gaps = 10/252 (3%)
Query: 14 TLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPNVLK 73
T+ ++G G V+ + ++ VAVK L + D ++ +EA M + HPN+++
Sbjct: 16 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL--KEDTMEVEEFLKEAAVMKEIKHPNLVQ 73
Query: 74 SHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHI 133
+ ++++ FM+ G+ L L+ VV+ + ++ ++YL I
Sbjct: 74 LLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFI 133
Query: 134 HRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYD 193
HRD+ + N L+ +K+ DFG+S + +GD W APE + + +
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAHAGAKFPIKWTAPESL-AYNKFS 190
Query: 194 FKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIA 252
K+D+W+FG+ E+A +G +P+ P L + ER + +++
Sbjct: 191 IKSDVWAFGVLLWEIATYGMSPY----PGIDLSQVYELLEKDYRMERPEGCPEKVYELMR 246
Query: 253 SCLVKDPSKRPS 264
+C +PS RPS
Sbjct: 247 ACWQWNPSDRPS 258
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 121/280 (43%), Gaps = 35/280 (12%)
Query: 4 KKYPIGAEHYTLYEEVGQGVSASVHRALCI-PFNEIVAVKILDFERDNSD--LSNISREA 60
+ Y I E L +G+G VH+ + + P N +AV I + SD +EA
Sbjct: 383 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEA 442
Query: 61 QTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILR-- 118
TM DHP+++K ++++ +W++M + G L+ F + + IL
Sbjct: 443 LTMRQFDHPHIVKL-IGVITENPVWIIMELCTLGELRSFLQVR---KFSLDLASLILYAY 498
Query: 119 EVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTP 178
++ L YL +HRD+ + N+L+ +KLGDFG+S + DS + + P
Sbjct: 499 QLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKL---P 555
Query: 179 C-WMAPEVMEQLHGYDFKADIWSFGITALE-LAHGHAPFSKYPPMKVL--------LMTL 228
WMAPE + + +D+W FG+ E L HG PF V+ L
Sbjct: 556 IKWMAPESI-NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMP 614
Query: 229 QNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKL 268
N PP L ++ C DPS+RP +L
Sbjct: 615 PNCPPTL------------YSLMTKCWAYDPSRRPRFTEL 642
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 117/227 (51%), Gaps = 19/227 (8%)
Query: 69 PNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLH 128
P ++ H +F ++ L +++ +++GG L + + F E + + E++ L++LH
Sbjct: 119 PFLVTLHYAFQTETKLHLILDYINGGELFTHL--SQRERFTEHEVQIYVGEIVLALEHLH 176
Query: 129 HHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQ 188
G I+RD+K NIL+D G + L DFG+S F + + +R + F GT +MAP+++
Sbjct: 177 KLGIIYRDIKLENILLDSNGHVVLTDFGLSKE-FVADETERAYD-FCGTIEYMAPDIVRG 234
Query: 189 L-HGYDFKADIWSFGITALELAHGHAPFS----KYPPMKVLLMTLQNAPPGLDYERDRKF 243
G+D D WS G+ EL G +PF+ K ++ L++ PP ++
Sbjct: 235 GDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPP-----YPQEM 289
Query: 244 SKSFKQMIASCLVKDPSKR-----PSAKKLLKHSFFKQARSNEYIAR 285
S K +I L+KDP KR A ++ +H FF++ ++ A+
Sbjct: 290 SALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKINWDDLAAK 336
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 116/252 (46%), Gaps = 10/252 (3%)
Query: 14 TLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPNVLK 73
T+ ++G G V+ + ++ VAVK L + D ++ +EA M + HPN+++
Sbjct: 21 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL--KEDTMEVEEFLKEAAVMKEIKHPNLVQ 78
Query: 74 SHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHI 133
+ ++++ FM+ G+ L L+ VV+ + ++ ++YL I
Sbjct: 79 LLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFI 138
Query: 134 HRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYD 193
HRD+ + N L+ +K+ DFG+S + +GD W APE + + +
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAHAGAKFPIKWTAPESL-AYNKFS 195
Query: 194 FKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIA 252
K+D+W+FG+ E+A +G +P+ P L + ER + +++
Sbjct: 196 IKSDVWAFGVLLWEIATYGMSPY----PGIDLSQVYELLEKDYRMERPEGCPEKVYELMR 251
Query: 253 SCLVKDPSKRPS 264
+C +PS RPS
Sbjct: 252 ACWQWNPSDRPS 263
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 133/289 (46%), Gaps = 29/289 (10%)
Query: 5 KYPIGAEHYTLYEEVGQGVSASVHRALCIPFNE-------IVAVKILDFERDNSDLSNIS 57
K+ + TL + +G+G V A + ++ VAVK+L + DLS++
Sbjct: 29 KWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLV 88
Query: 58 REAQTMILV-DHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVV---- 112
E + M ++ H N++ + D L+V++ + S G+ L+A P G E
Sbjct: 89 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINR 148
Query: 113 ----------IATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLF 162
+ + ++ +G++YL IHRD+ + N+L+ +K+ DFG++ +
Sbjct: 149 VPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDIN 208
Query: 163 DSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALEL-AHGHAPFSKYPPM 221
+ ++ N + WMAPE + Y ++D+WSFG+ E+ G +P+ P+
Sbjct: 209 NIDXXKKTTNGRLPVK-WMAPEALFD-RVYTHQSDVWSFGVLMWEIFTLGGSPYPGI-PV 265
Query: 222 KVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLK 270
+ L L+ G ++ + M+ C PS+RP+ K+L++
Sbjct: 266 EELFKLLKE---GHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 137/293 (46%), Gaps = 37/293 (12%)
Query: 5 KYPIGAEHYTLYEEVGQGVSASVHRALCIPFNE-------IVAVKILDFERDNSDLSNIS 57
K+ + TL + +G+G V A + ++ VAVK+L + DLS++
Sbjct: 29 KWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLV 88
Query: 58 REAQTMILV-DHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDG--------- 107
E + M ++ H N++ + D L+V++ + S G+ L+A P G
Sbjct: 89 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 148
Query: 108 -------FEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSAC 160
F+++V T ++ +G++YL IHRD+ + N+L+ +K+ DFG++
Sbjct: 149 VPEEQMTFKDLVSCTY--QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR- 205
Query: 161 LFDSGDRQRMRNTFVGT-PC-WMAPEVMEQLHGYDFKADIWSFGITALEL-AHGHAPFSK 217
D + +NT G P WMAPE + Y ++D+WSFG+ E+ G +P+
Sbjct: 206 --DINNIDYYKNTTNGRLPVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIFTLGGSPYPG 262
Query: 218 YPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLK 270
P++ L L+ G ++ + M+ C PS+RP+ K+L++
Sbjct: 263 I-PVEELFKLLKE---GHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 119/271 (43%), Gaps = 16/271 (5%)
Query: 1 MDKKKYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREA 60
+ K + I E L ++GQG V +N V I + +EA
Sbjct: 8 LAKDAWEIPRESLRLEVKLGQGCFGEVWMGT---WNGTTRVAIKTLKPGTMSPEAFLQEA 64
Query: 61 QTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREV 120
Q M + H +++ + + VS+ +++V+ +MS GS L LK + + ++
Sbjct: 65 QVMKKLRHEKLVQLY-AVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQI 123
Query: 121 LKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPC- 179
G+ Y+ ++HRD+++ NIL+ K+ DFG++ + D+ R F P
Sbjct: 124 ASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKF---PIK 180
Query: 180 WMAPEVMEQLHG-YDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLDY 237
W APE L+G + K+D+WSFGI EL G P+ P V L G
Sbjct: 181 WTAPEA--ALYGRFTIKSDVWSFGILLTELTTKGRVPY----PGMVNREVLDQVERGYRM 234
Query: 238 ERDRKFSKSFKQMIASCLVKDPSKRPSAKKL 268
+ +S ++ C KDP +RP+ + L
Sbjct: 235 PCPPECPESLHDLMCQCWRKDPEERPTFEYL 265
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 136/291 (46%), Gaps = 33/291 (11%)
Query: 5 KYPIGAEHYTLYEEVGQGVSASVHRALCIPFNE-------IVAVKILDFERDNSDLSNIS 57
K+ + TL + +G+G V A + ++ VAVK+L + DLS++
Sbjct: 29 KWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLV 88
Query: 58 REAQTMILV-DHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDG--------- 107
E + M ++ H N++ + D L+V++ + S G+ L+A P G
Sbjct: 89 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 148
Query: 108 -------FEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSAC 160
F+++V T ++ +G++YL IHRD+ + N+L+ +K+ DFG++
Sbjct: 149 VPEEQMTFKDLVSCTY--QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARD 206
Query: 161 LFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALEL-AHGHAPFSKYP 219
+ + ++ N + WMAPE + Y ++D+WSFG+ E+ G +P+
Sbjct: 207 INNIDXXKKTTNGRLPVK-WMAPEALFD-RVYTHQSDVWSFGVLMWEIFTLGGSPYPGI- 263
Query: 220 PMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLK 270
P++ L L+ G ++ + M+ C PS+RP+ K+L++
Sbjct: 264 PVEELFKLLKE---GHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 121/280 (43%), Gaps = 35/280 (12%)
Query: 4 KKYPIGAEHYTLYEEVGQGVSASVHRALCI-PFNEIVAVKILDFERDNSD--LSNISREA 60
+ Y I E L +G+G VH+ + + P N +AV I + SD +EA
Sbjct: 383 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEA 442
Query: 61 QTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILR-- 118
TM DHP+++K ++++ +W++M + G L+ F + + IL
Sbjct: 443 LTMRQFDHPHIVKL-IGVITENPVWIIMELCTLGELRSFLQVR---KFSLDLASLILYAY 498
Query: 119 EVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTP 178
++ L YL +HRD+ + N+L+ +KLGDFG+S + DS + + P
Sbjct: 499 QLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL---P 555
Query: 179 C-WMAPEVMEQLHGYDFKADIWSFGITALE-LAHGHAPFSKYPPMKVL--------LMTL 228
WMAPE + + +D+W FG+ E L HG PF V+ L
Sbjct: 556 IKWMAPESI-NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMP 614
Query: 229 QNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKL 268
N PP L ++ C DPS+RP +L
Sbjct: 615 PNCPPTL------------YSLMTKCWAYDPSRRPRFTEL 642
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 115/252 (45%), Gaps = 10/252 (3%)
Query: 14 TLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPNVLK 73
T+ ++G G V+ + ++ VAVK L + D ++ +EA M + HPN+++
Sbjct: 21 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL--KEDTMEVEEFLKEAAVMKEIKHPNLVQ 78
Query: 74 SHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHI 133
+ +++ FM+ G+ L L+ VV+ + ++ ++YL I
Sbjct: 79 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFI 138
Query: 134 HRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYD 193
HRD+ + N L+ +K+ DFG+S + +GD W APE + + +
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAHAGAKFPIKWTAPESL-AYNKFS 195
Query: 194 FKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIA 252
K+D+W+FG+ E+A +G +P+ P L + ER + +++
Sbjct: 196 IKSDVWAFGVLLWEIATYGMSPY----PGIDLSQVYELLEKDYRMERPEGCPEKVYELMR 251
Query: 253 SCLVKDPSKRPS 264
+C +PS RPS
Sbjct: 252 ACWQWNPSDRPS 263
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 120/279 (43%), Gaps = 33/279 (11%)
Query: 4 KKYPIGAEHYTLYEEVGQGVSASVHRALCI-PFNEIVAVKILDFERDNSD--LSNISREA 60
+ Y I E L +G+G VH+ + + P N +AV I + SD +EA
Sbjct: 5 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEA 64
Query: 61 QTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKA-AYPDGFEEVVIATILRE 119
TM DHP+++K ++++ +W++M + G L+ Y +++ +
Sbjct: 65 LTMRQFDHPHIVKL-IGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAY--Q 121
Query: 120 VLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPC 179
+ L YL +HRD+ + N+L+ +KLGDFG+S + DS + + P
Sbjct: 122 LSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL---PI 178
Query: 180 -WMAPEVMEQLHGYDFKADIWSFGITALE-LAHGHAPFSKYPPMKVL--------LMTLQ 229
WMAPE + + +D+W FG+ E L HG PF V+ L
Sbjct: 179 KWMAPESI-NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPP 237
Query: 230 NAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKL 268
N PP L ++ C DPS+RP +L
Sbjct: 238 NCPPTL------------YSLMTKCWAYDPSRRPRFTEL 264
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 127/278 (45%), Gaps = 23/278 (8%)
Query: 2 DKKKYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKIL---DFERDNSDLSNISR 58
+ KK E + + +G+G +V+ A I+A+K+L E+ + + R
Sbjct: 1 ESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRR 59
Query: 59 EAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILR 118
E + + HPN+L+ + F +++++ + G+ L+ F+E AT +
Sbjct: 60 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYIT 117
Query: 119 EVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTP 178
E+ L Y H IHRD+K N+L+ G +K+ DFG S S R GT
Sbjct: 118 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RRXXLCGTL 172
Query: 179 CWMAPEVME-QLHGYDFKADIWSFGITALELAHGHAPF--SKYPPMKVLLMTLQNAPPGL 235
++ PE++E ++H D K D+WS G+ E G PF + Y + ++ P
Sbjct: 173 DYLPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF 230
Query: 236 DYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSF 273
E R +I+ L +PS+RP +++L+H +
Sbjct: 231 VTEGAR-------DLISRLLKHNPSQRPMLREVLEHPW 261
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 115/252 (45%), Gaps = 10/252 (3%)
Query: 14 TLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPNVLK 73
T+ ++G G V+ + ++ VAVK L + D ++ +EA M + HPN+++
Sbjct: 21 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL--KEDTMEVEEFLKEAAVMKEIKHPNLVQ 78
Query: 74 SHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHI 133
+ +++ FM+ G+ L L+ VV+ + ++ ++YL I
Sbjct: 79 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFI 138
Query: 134 HRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYD 193
HRD+ + N L+ +K+ DFG+S + +GD W APE + + +
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAHAGAKFPIKWTAPESL-AYNKFS 195
Query: 194 FKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIA 252
K+D+W+FG+ E+A +G +P+ P L + ER + +++
Sbjct: 196 IKSDVWAFGVLLWEIATYGMSPY----PGIDLSQVYELLEKDYRMERPEGCPEKVYELMR 251
Query: 253 SCLVKDPSKRPS 264
+C +PS RPS
Sbjct: 252 ACWQWNPSDRPS 263
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 126/275 (45%), Gaps = 35/275 (12%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKIL---DFERDNSDLSNISREAQTMILVD 67
E + + +G+G +V+ A I+A+K+L E+ + + RE + +
Sbjct: 7 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLR 65
Query: 68 HPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYL 127
HPN+L+ + F +++++ + G+ L+ F+E AT + E+ L Y
Sbjct: 66 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYC 123
Query: 128 HHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVME 187
H IHRD+K N+L+ G +K+ DFG S S R T GT ++ PE++E
Sbjct: 124 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RRTTLCGTLDYLPPEMIE 178
Query: 188 -QLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKS 246
++H D K D+WS G+ E G PF T Q Y+R + +
Sbjct: 179 GRMH--DEKVDLWSLGVLCYEFLVGKPPFEA--------NTYQET-----YKRISRVEFT 223
Query: 247 F--------KQMIASCLVKDPSKRPSAKKLLKHSF 273
F + +I+ L +PS+RP +++L+H +
Sbjct: 224 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 258
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 115/252 (45%), Gaps = 10/252 (3%)
Query: 14 TLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPNVLK 73
T+ ++G G V+ + ++ VAVK L + D ++ +EA M + HPN+++
Sbjct: 29 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL--KEDTMEVEEFLKEAAVMKEIKHPNLVQ 86
Query: 74 SHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHI 133
+ +++ FM+ G+ L L+ VV+ + ++ ++YL I
Sbjct: 87 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFI 146
Query: 134 HRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYD 193
HRD+ + N L+ +K+ DFG+S + +GD W APE + + +
Sbjct: 147 HRDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAHAGAKFPIKWTAPESL-AYNKFS 203
Query: 194 FKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIA 252
K+D+W+FG+ E+A +G +P+ P L + ER + +++
Sbjct: 204 IKSDVWAFGVLLWEIATYGMSPY----PGIDLSQVYELLEKDYRMERPEGCPEKVYELMR 259
Query: 253 SCLVKDPSKRPS 264
+C +PS RPS
Sbjct: 260 ACWQWNPSDRPS 271
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 120/279 (43%), Gaps = 33/279 (11%)
Query: 4 KKYPIGAEHYTLYEEVGQGVSASVHRALCI-PFNEIVAVKILDFERDNSD--LSNISREA 60
+ Y I E L +G+G VH+ + + P N +AV I + SD +EA
Sbjct: 6 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEA 65
Query: 61 QTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKA-AYPDGFEEVVIATILRE 119
TM DHP+++K ++++ +W++M + G L+ Y +++ +
Sbjct: 66 LTMRQFDHPHIVKL-IGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAY--Q 122
Query: 120 VLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPC 179
+ L YL +HRD+ + N+L+ +KLGDFG+S + DS + + P
Sbjct: 123 LSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL---PI 179
Query: 180 -WMAPEVMEQLHGYDFKADIWSFGITALE-LAHGHAPFSKYPPMKVL--------LMTLQ 229
WMAPE + + +D+W FG+ E L HG PF V+ L
Sbjct: 180 KWMAPESI-NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPP 238
Query: 230 NAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKL 268
N PP L ++ C DPS+RP +L
Sbjct: 239 NCPPTL------------YSLMTKCWAYDPSRRPRFTEL 265
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 106/221 (47%), Gaps = 10/221 (4%)
Query: 12 HYTLYEEVGQGVSASVHRALCIPF----NEIVAVKILDFERDNSDLSNISREAQTMILVD 67
H +++G+G SV P E+VAVK L + L + RE + + +
Sbjct: 10 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH-LRDFEREIEILKSLQ 68
Query: 68 HPNVLKSH--CSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLD 125
H N++K C NL ++M ++ GS L+ + + + + + ++ KG++
Sbjct: 69 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICKGME 127
Query: 126 YLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEV 185
YL +IHRD+ + NIL++ +K+GDFG++ L + +++ W APE
Sbjct: 128 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 187
Query: 186 MEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLM 226
+ + + +D+WSFG+ EL + SK PP + + M
Sbjct: 188 LTE-SKFSVASDVWSFGVVLYEL-FTYIEKSKSPPAEFMRM 226
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 115/252 (45%), Gaps = 10/252 (3%)
Query: 14 TLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPNVLK 73
T+ ++G G V+ + ++ VAVK L + D ++ +EA M + HPN+++
Sbjct: 16 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL--KEDTMEVEEFLKEAAVMKEIKHPNLVQ 73
Query: 74 SHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHI 133
+ +++ FM+ G+ L L+ VV+ + ++ ++YL I
Sbjct: 74 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFI 133
Query: 134 HRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYD 193
HRD+ + N L+ +K+ DFG+S + +GD W APE + + +
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAHAGAKFPIKWTAPESL-AYNKFS 190
Query: 194 FKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIA 252
K+D+W+FG+ E+A +G +P+ P L + ER + +++
Sbjct: 191 IKSDVWAFGVLLWEIATYGMSPY----PGIDLSQVYELLEKDYRMERPEGCPEKVYELMR 246
Query: 253 SCLVKDPSKRPS 264
+C +PS RPS
Sbjct: 247 ACWQWNPSDRPS 258
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 115/252 (45%), Gaps = 10/252 (3%)
Query: 14 TLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPNVLK 73
T+ ++G G V+ + ++ VAVK L + D ++ +EA M + HPN+++
Sbjct: 21 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL--KEDTMEVEEFLKEAAVMKEIKHPNLVQ 78
Query: 74 SHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHI 133
+ +++ FM+ G+ L L+ VV+ + ++ ++YL I
Sbjct: 79 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFI 138
Query: 134 HRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYD 193
HRD+ + N L+ +K+ DFG+S + +GD W APE + + +
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAHAGAKFPIKWTAPESL-AYNKFS 195
Query: 194 FKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIA 252
K+D+W+FG+ E+A +G +P+ P L + ER + +++
Sbjct: 196 IKSDVWAFGVLLWEIATYGMSPY----PGIDLSQVYELLEKDYRMERPEGCPEKVYELMR 251
Query: 253 SCLVKDPSKRPS 264
+C +PS RPS
Sbjct: 252 ACWQWNPSDRPS 263
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 115/252 (45%), Gaps = 10/252 (3%)
Query: 14 TLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPNVLK 73
T+ ++G G V+ + ++ VAVK L + D ++ +EA M + HPN+++
Sbjct: 21 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL--KEDTMEVEEFLKEAAVMKEIKHPNLVQ 78
Query: 74 SHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHI 133
+ +++ FM+ G+ L L+ VV+ + ++ ++YL I
Sbjct: 79 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFI 138
Query: 134 HRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYD 193
HRD+ + N L+ +K+ DFG+S + +GD W APE + + +
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLM--TGDTXTAHAGAKFPIKWTAPESL-AYNKFS 195
Query: 194 FKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIA 252
K+D+W+FG+ E+A +G +P+ P L + ER + +++
Sbjct: 196 IKSDVWAFGVLLWEIATYGMSPY----PGIDLSQVYELLEKDYRMERPEGCPEKVYELMR 251
Query: 253 SCLVKDPSKRPS 264
+C +PS RPS
Sbjct: 252 ACWQWNPSDRPS 263
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 106/221 (47%), Gaps = 10/221 (4%)
Query: 12 HYTLYEEVGQGVSASVHRALCIPF----NEIVAVKILDFERDNSDLSNISREAQTMILVD 67
H +++G+G SV P E+VAVK L + L + RE + + +
Sbjct: 9 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH-LRDFEREIEILKSLQ 67
Query: 68 HPNVLKSH--CSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLD 125
H N++K C NL ++M ++ GS L+ + + + + + ++ KG++
Sbjct: 68 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICKGME 126
Query: 126 YLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEV 185
YL +IHRD+ + NIL++ +K+GDFG++ L + +++ W APE
Sbjct: 127 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 186
Query: 186 MEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLM 226
+ + + +D+WSFG+ EL + SK PP + + M
Sbjct: 187 LTE-SKFSVASDVWSFGVVLYEL-FTYIEKSKSPPAEFMRM 225
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 106/221 (47%), Gaps = 10/221 (4%)
Query: 12 HYTLYEEVGQGVSASVHRALCIPF----NEIVAVKILDFERDNSDLSNISREAQTMILVD 67
H +++G+G SV P E+VAVK L + L + RE + + +
Sbjct: 15 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH-LRDFEREIEILKSLQ 73
Query: 68 HPNVLKSH--CSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLD 125
H N++K C NL ++M ++ GS L+ + + + + + ++ KG++
Sbjct: 74 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICKGME 132
Query: 126 YLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEV 185
YL +IHRD+ + NIL++ +K+GDFG++ L + +++ W APE
Sbjct: 133 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 192
Query: 186 MEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLM 226
+ + + +D+WSFG+ EL + SK PP + + M
Sbjct: 193 LTE-SKFSVASDVWSFGVVLYEL-FTYIEKSKSPPAEFMRM 231
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 115/252 (45%), Gaps = 10/252 (3%)
Query: 14 TLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPNVLK 73
T+ ++G G V+ + ++ VAVK L + D ++ +EA M + HPN+++
Sbjct: 18 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL--KEDTMEVEEFLKEAAVMKEIKHPNLVQ 75
Query: 74 SHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHI 133
+ +++ FM+ G+ L L+ VV+ + ++ ++YL I
Sbjct: 76 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFI 135
Query: 134 HRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYD 193
HRD+ + N L+ +K+ DFG+S + +GD W APE + + +
Sbjct: 136 HRDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAHAGAKFPIKWTAPESL-AYNKFS 192
Query: 194 FKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIA 252
K+D+W+FG+ E+A +G +P+ P L + ER + +++
Sbjct: 193 IKSDVWAFGVLLWEIATYGMSPY----PGIDLSQVYELLEKDYRMERPEGCPEKVYELMR 248
Query: 253 SCLVKDPSKRPS 264
+C +PS RPS
Sbjct: 249 ACWQWNPSDRPS 260
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 106/221 (47%), Gaps = 10/221 (4%)
Query: 12 HYTLYEEVGQGVSASVHRALCIPF----NEIVAVKILDFERDNSDLSNISREAQTMILVD 67
H +++G+G SV P E+VAVK L + L + RE + + +
Sbjct: 14 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH-LRDFEREIEILKSLQ 72
Query: 68 HPNVLKSH--CSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLD 125
H N++K C NL ++M ++ GS L+ + + + + + ++ KG++
Sbjct: 73 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICKGME 131
Query: 126 YLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEV 185
YL +IHRD+ + NIL++ +K+GDFG++ L + +++ W APE
Sbjct: 132 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 191
Query: 186 MEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLM 226
+ + + +D+WSFG+ EL + SK PP + + M
Sbjct: 192 LTE-SKFSVASDVWSFGVVLYEL-FTYIEKSKSPPAEFMRM 230
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 118/271 (43%), Gaps = 16/271 (5%)
Query: 1 MDKKKYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREA 60
+ K + I E L ++GQG V +N V I + +EA
Sbjct: 8 LAKDAWEIPRESLRLEVKLGQGCFGEVWMGT---WNGTTRVAIKTLKPGTMSPEAFLQEA 64
Query: 61 QTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREV 120
Q M + H +++ + + VS+ +++V +MS GS L LK + + ++
Sbjct: 65 QVMKKIRHEKLVQLY-AVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQI 123
Query: 121 LKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPC- 179
G+ Y+ ++HRD+++ NIL+ K+ DFG++ + D+ R F P
Sbjct: 124 ASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF---PIK 180
Query: 180 WMAPEVMEQLHG-YDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLDY 237
W APE L+G + K+D+WSFGI EL G P+ P V L G
Sbjct: 181 WTAPEA--ALYGRFTIKSDVWSFGILLTELTTKGRVPY----PGMVNREVLDQVERGYRM 234
Query: 238 ERDRKFSKSFKQMIASCLVKDPSKRPSAKKL 268
+ +S ++ C KDP +RP+ + L
Sbjct: 235 PCPPECPESLHDLMCQCWRKDPEERPTFEYL 265
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 106/221 (47%), Gaps = 10/221 (4%)
Query: 12 HYTLYEEVGQGVSASVHRALCIPF----NEIVAVKILDFERDNSDLSNISREAQTMILVD 67
H +++G+G SV P E+VAVK L + L + RE + + +
Sbjct: 42 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH-LRDFEREIEILKSLQ 100
Query: 68 HPNVLKSH--CSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLD 125
H N++K C NL ++M ++ GS L+ + + + + + ++ KG++
Sbjct: 101 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICKGME 159
Query: 126 YLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEV 185
YL +IHRD+ + NIL++ +K+GDFG++ L + +++ W APE
Sbjct: 160 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 219
Query: 186 MEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLM 226
+ + + +D+WSFG+ EL + SK PP + + M
Sbjct: 220 LTE-SKFSVASDVWSFGVVLYEL-FTYIEKSKSPPAEFMRM 258
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 121/280 (43%), Gaps = 35/280 (12%)
Query: 4 KKYPIGAEHYTLYEEVGQGVSASVHRALCI-PFNEIVAVKILDFERDNSD--LSNISREA 60
+ Y I E L +G+G VH+ + + P N +AV I + SD +EA
Sbjct: 3 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEA 62
Query: 61 QTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILR-- 118
TM DHP+++K ++++ +W++M + G L+ F + + IL
Sbjct: 63 LTMRQFDHPHIVK-LIGVITENPVWIIMELCTLGELRSFLQVR---KFSLDLASLILYAY 118
Query: 119 EVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTP 178
++ L YL +HRD+ + N+L+ +KLGDFG+S + DS + + P
Sbjct: 119 QLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKL---P 175
Query: 179 C-WMAPEVMEQLHGYDFKADIWSFGITALE-LAHGHAPFSKYPPMKVL--------LMTL 228
WMAPE + + +D+W FG+ E L HG PF V+ L
Sbjct: 176 IKWMAPESI-NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMP 234
Query: 229 QNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKL 268
N PP L ++ C DPS+RP +L
Sbjct: 235 PNCPPTL------------YSLMTKCWAYDPSRRPRFTEL 262
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 120/279 (43%), Gaps = 33/279 (11%)
Query: 4 KKYPIGAEHYTLYEEVGQGVSASVHRALCI-PFNEIVAVKILDFERDNSD--LSNISREA 60
+ Y I E L +G+G VH+ + + P N +AV I + SD +EA
Sbjct: 31 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEA 90
Query: 61 QTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKA-AYPDGFEEVVIATILRE 119
TM DHP+++K ++++ +W++M + G L+ Y +++ +
Sbjct: 91 LTMRQFDHPHIVK-LIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAY--Q 147
Query: 120 VLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPC 179
+ L YL +HRD+ + N+L+ +KLGDFG+S + DS + + P
Sbjct: 148 LSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL---PI 204
Query: 180 -WMAPEVMEQLHGYDFKADIWSFGITALE-LAHGHAPFSKYPPMKVL--------LMTLQ 229
WMAPE + + +D+W FG+ E L HG PF V+ L
Sbjct: 205 KWMAPESI-NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPP 263
Query: 230 NAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKL 268
N PP L ++ C DPS+RP +L
Sbjct: 264 NCPPTL------------YSLMTKCWAYDPSRRPRFTEL 290
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 115/252 (45%), Gaps = 10/252 (3%)
Query: 14 TLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPNVLK 73
T+ ++G G V+ + ++ VAVK L + D ++ +EA M + HPN+++
Sbjct: 16 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL--KEDTMEVEEFLKEAAVMKEIKHPNLVQ 73
Query: 74 SHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHI 133
+ +++ FM+ G+ L L+ VV+ + ++ ++YL I
Sbjct: 74 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFI 133
Query: 134 HRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYD 193
HRD+ + N L+ +K+ DFG+S + +GD W APE + + +
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAHAGAKFPIKWTAPESL-AYNKFS 190
Query: 194 FKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIA 252
K+D+W+FG+ E+A +G +P+ P L + ER + +++
Sbjct: 191 IKSDVWAFGVLLWEIATYGMSPY----PGIDLSQVYELLEKDYRMERPEGCPEKVYELMR 246
Query: 253 SCLVKDPSKRPS 264
+C +PS RPS
Sbjct: 247 ACWQWNPSDRPS 258
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 126/275 (45%), Gaps = 35/275 (12%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKIL---DFERDNSDLSNISREAQTMILVD 67
E + + +G+G +V+ A I+A+K+L E+ + + RE + +
Sbjct: 12 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLR 70
Query: 68 HPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYL 127
HPN+L+ + F +++++ + G+ L+ F+E AT + E+ L Y
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYC 128
Query: 128 HHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVME 187
H IHRD+K N+L+ G +K+ DFG S S R T GT ++ PE++E
Sbjct: 129 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RRTTLCGTLDYLPPEMIE 183
Query: 188 -QLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKS 246
++H D K D+WS G+ E G PF T Q Y+R + +
Sbjct: 184 GRMH--DEKVDLWSLGVLCYEFLVGKPPFEA--------NTYQET-----YKRISRVEFT 228
Query: 247 F--------KQMIASCLVKDPSKRPSAKKLLKHSF 273
F + +I+ L +PS+RP +++L+H +
Sbjct: 229 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 263
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 106/221 (47%), Gaps = 10/221 (4%)
Query: 12 HYTLYEEVGQGVSASVHRALCIPF----NEIVAVKILDFERDNSDLSNISREAQTMILVD 67
H +++G+G SV P E+VAVK L + L + RE + + +
Sbjct: 11 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH-LRDFEREIEILKSLQ 69
Query: 68 HPNVLKSH--CSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLD 125
H N++K C NL ++M ++ GS L+ + + + + + ++ KG++
Sbjct: 70 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICKGME 128
Query: 126 YLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEV 185
YL +IHRD+ + NIL++ +K+GDFG++ L + +++ W APE
Sbjct: 129 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 188
Query: 186 MEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLM 226
+ + + +D+WSFG+ EL + SK PP + + M
Sbjct: 189 LTE-SKFSVASDVWSFGVVLYEL-FTYIEKSKSPPAEFMRM 227
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 111/242 (45%), Gaps = 16/242 (6%)
Query: 52 DLSNISREAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEV 111
++++ E++ + HP + +F + L VM + +GG L F E
Sbjct: 53 EVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERV--FTEE 110
Query: 112 VIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMR 171
E++ L+YLH ++RD+K N+++D G IK+ DFG+ C D M+
Sbjct: 111 RARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGL--CKEGISDGATMK 168
Query: 172 NTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNA 231
F GTP ++APEV+E + Y D W G+ E+ G PF ++ + L
Sbjct: 169 -XFCGTPEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILME- 225
Query: 232 PPGLDYERDRKFSKSFKQMIASCLVKDPSKR----PS-AKKLLKHSFFKQARSNEYIART 286
+ R S K ++A L KDP +R PS AK++++H FF + + +
Sbjct: 226 ----EIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKK 281
Query: 287 LL 288
LL
Sbjct: 282 LL 283
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 119/271 (43%), Gaps = 16/271 (5%)
Query: 1 MDKKKYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREA 60
+ K + I E L ++GQG V +N V I + +EA
Sbjct: 8 LAKDAWEIPRESLRLEVKLGQGCFGEVWMGT---WNGTTRVAIKTLKPGTMSPEAFLQEA 64
Query: 61 QTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREV 120
Q M + H +++ + + VS+ +++V+ +MS GS L LK + + ++
Sbjct: 65 QVMKKLRHEKLVQLY-AVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQI 123
Query: 121 LKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPC- 179
G+ Y+ ++HRD+++ NIL+ K+ DFG++ + D+ R F P
Sbjct: 124 ASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF---PIK 180
Query: 180 WMAPEVMEQLHG-YDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLDY 237
W APE L+G + K+D+WSFGI EL G P+ P V L G
Sbjct: 181 WTAPEA--ALYGRFTIKSDVWSFGILLTELTTKGRVPY----PGMVNREVLDQVERGYRM 234
Query: 238 ERDRKFSKSFKQMIASCLVKDPSKRPSAKKL 268
+ +S ++ C KDP +RP+ + L
Sbjct: 235 PCPPECPESLHDLMCQCWRKDPEERPTFEYL 265
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 106/221 (47%), Gaps = 10/221 (4%)
Query: 12 HYTLYEEVGQGVSASVHRALCIPF----NEIVAVKILDFERDNSDLSNISREAQTMILVD 67
H +++G+G SV P E+VAVK L + L + RE + + +
Sbjct: 16 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH-LRDFEREIEILKSLQ 74
Query: 68 HPNVLKSH--CSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLD 125
H N++K C NL ++M ++ GS L+ + + + + + ++ KG++
Sbjct: 75 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICKGME 133
Query: 126 YLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEV 185
YL +IHRD+ + NIL++ +K+GDFG++ L + +++ W APE
Sbjct: 134 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 193
Query: 186 MEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLM 226
+ + + +D+WSFG+ EL + SK PP + + M
Sbjct: 194 LTE-SKFSVASDVWSFGVVLYEL-FTYIEKSKSPPAEFMRM 232
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 106/221 (47%), Gaps = 10/221 (4%)
Query: 12 HYTLYEEVGQGVSASVHRALCIPF----NEIVAVKILDFERDNSDLSNISREAQTMILVD 67
H +++G+G SV P E+VAVK L + L + RE + + +
Sbjct: 18 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH-LRDFEREIEILKSLQ 76
Query: 68 HPNVLKSH--CSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLD 125
H N++K C NL ++M ++ GS L+ + + + + + ++ KG++
Sbjct: 77 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICKGME 135
Query: 126 YLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEV 185
YL +IHRD+ + NIL++ +K+GDFG++ L + +++ W APE
Sbjct: 136 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 195
Query: 186 MEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLM 226
+ + + +D+WSFG+ EL + SK PP + + M
Sbjct: 196 LTE-SKFSVASDVWSFGVVLYEL-FTYIEKSKSPPAEFMRM 234
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 118/271 (43%), Gaps = 16/271 (5%)
Query: 1 MDKKKYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREA 60
+ K + I E L ++GQG V +N V I + +EA
Sbjct: 8 LAKDAWEIPRESLRLEVKLGQGCFGEVWMGT---WNGTTRVAIKTLKPGTMSPEAFLQEA 64
Query: 61 QTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREV 120
Q M + H +++ + + VS+ +++VM +MS G L LK + + ++
Sbjct: 65 QVMKKLRHEKLVQLY-AVVSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQI 123
Query: 121 LKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPC- 179
G+ Y+ ++HRD+++ NIL+ K+ DFG++ + D+ R F P
Sbjct: 124 ASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF---PIK 180
Query: 180 WMAPEVMEQLHG-YDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLDY 237
W APE L+G + K+D+WSFGI EL G P+ P V L G
Sbjct: 181 WTAPEA--ALYGRFTIKSDVWSFGILLTELTTKGRVPY----PGMVNREVLDQVERGYRM 234
Query: 238 ERDRKFSKSFKQMIASCLVKDPSKRPSAKKL 268
+ +S ++ C KDP +RP+ + L
Sbjct: 235 PCPPECPESLHDLMCQCWRKDPEERPTFEYL 265
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 106/221 (47%), Gaps = 10/221 (4%)
Query: 12 HYTLYEEVGQGVSASVHRALCIPF----NEIVAVKILDFERDNSDLSNISREAQTMILVD 67
H +++G+G SV P E+VAVK L + L + RE + + +
Sbjct: 11 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH-LRDFEREIEILKSLQ 69
Query: 68 HPNVLKSH--CSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLD 125
H N++K C NL ++M ++ GS L+ + + + + + ++ KG++
Sbjct: 70 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICKGME 128
Query: 126 YLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEV 185
YL +IHRD+ + NIL++ +K+GDFG++ L + +++ W APE
Sbjct: 129 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 188
Query: 186 MEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLM 226
+ + + +D+WSFG+ EL + SK PP + + M
Sbjct: 189 LTE-SKFSVASDVWSFGVVLYEL-FTYIEKSKSPPAEFMRM 227
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 115/252 (45%), Gaps = 10/252 (3%)
Query: 14 TLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPNVLK 73
T+ ++G G V+ + ++ VAVK L + D ++ +EA M + HPN+++
Sbjct: 20 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL--KEDTMEVEEFLKEAAVMKEIKHPNLVQ 77
Query: 74 SHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHI 133
+ +++ FM+ G+ L L+ VV+ + ++ ++YL I
Sbjct: 78 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFI 137
Query: 134 HRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYD 193
HRD+ + N L+ +K+ DFG+S + +GD W APE + + +
Sbjct: 138 HRDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAHAGAKFPIKWTAPESL-AYNKFS 194
Query: 194 FKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIA 252
K+D+W+FG+ E+A +G +P+ P L + ER + +++
Sbjct: 195 IKSDVWAFGVLLWEIATYGMSPY----PGIDLSQVYELLEKDYRMERPEGCPEKVYELMR 250
Query: 253 SCLVKDPSKRPS 264
+C +PS RPS
Sbjct: 251 ACWQWNPSDRPS 262
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 115/252 (45%), Gaps = 10/252 (3%)
Query: 14 TLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPNVLK 73
T+ ++G G V+ + ++ VAVK L + D ++ +EA M + HPN+++
Sbjct: 18 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL--KEDTMEVEEFLKEAAVMKEIKHPNLVQ 75
Query: 74 SHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHI 133
+ +++ FM+ G+ L L+ VV+ + ++ ++YL I
Sbjct: 76 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFI 135
Query: 134 HRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYD 193
HRD+ + N L+ +K+ DFG+S + +GD W APE + + +
Sbjct: 136 HRDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAHAGAKFPIKWTAPESL-AYNKFS 192
Query: 194 FKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIA 252
K+D+W+FG+ E+A +G +P+ P L + ER + +++
Sbjct: 193 IKSDVWAFGVLLWEIATYGMSPY----PGIDLSQVYELLEKDYRMERPEGCPEKVYELMR 248
Query: 253 SCLVKDPSKRPS 264
+C +PS RPS
Sbjct: 249 ACWQWNPSDRPS 260
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 120/279 (43%), Gaps = 33/279 (11%)
Query: 4 KKYPIGAEHYTLYEEVGQGVSASVHRALCI-PFNEIVAVKILDFERDNSD--LSNISREA 60
+ Y I E L +G+G VH+ + + P N +AV I + SD +EA
Sbjct: 3 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEA 62
Query: 61 QTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKA-AYPDGFEEVVIATILRE 119
TM DHP+++K ++++ +W++M + G L+ Y +++ +
Sbjct: 63 LTMRQFDHPHIVKL-IGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAY--Q 119
Query: 120 VLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPC 179
+ L YL +HRD+ + N+L+ +KLGDFG+S + DS + + P
Sbjct: 120 LSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL---PI 176
Query: 180 -WMAPEVMEQLHGYDFKADIWSFGITALE-LAHGHAPFSKYPPMKVL--------LMTLQ 229
WMAPE + + +D+W FG+ E L HG PF V+ L
Sbjct: 177 KWMAPESI-NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPP 235
Query: 230 NAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKL 268
N PP L ++ C DPS+RP +L
Sbjct: 236 NCPPTL------------YSLMTKCWAYDPSRRPRFTEL 262
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 121/280 (43%), Gaps = 35/280 (12%)
Query: 4 KKYPIGAEHYTLYEEVGQGVSASVHRALCI-PFNEIVAVKILDFERDNSD--LSNISREA 60
+ Y I E L +G+G VH+ + + P N +AV I + SD +EA
Sbjct: 3 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEA 62
Query: 61 QTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILR-- 118
TM DHP+++K ++++ +W++M + G L+ F + + IL
Sbjct: 63 LTMRQFDHPHIVKL-IGVITENPVWIIMELCTLGELRSFLQV---RKFSLDLASLILYAY 118
Query: 119 EVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTP 178
++ L YL +HRD+ + N+L+ +KLGDFG+S + DS + + P
Sbjct: 119 QLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKL---P 175
Query: 179 C-WMAPEVMEQLHGYDFKADIWSFGITALE-LAHGHAPFSKYPPMKVL--------LMTL 228
WMAPE + + +D+W FG+ E L HG PF V+ L
Sbjct: 176 IKWMAPESI-NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMP 234
Query: 229 QNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKL 268
N PP L ++ C DPS+RP +L
Sbjct: 235 PNCPPTL------------YSLMTKCWAYDPSRRPRFTEL 262
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 120/279 (43%), Gaps = 33/279 (11%)
Query: 4 KKYPIGAEHYTLYEEVGQGVSASVHRALCI-PFNEIVAVKILDFERDNSD--LSNISREA 60
+ Y I E L +G+G VH+ + + P N +AV I + SD +EA
Sbjct: 3 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEA 62
Query: 61 QTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKA-AYPDGFEEVVIATILRE 119
TM DHP+++K ++++ +W++M + G L+ Y +++ +
Sbjct: 63 LTMRQFDHPHIVKL-IGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAY--Q 119
Query: 120 VLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPC 179
+ L YL +HRD+ + N+L+ +KLGDFG+S + DS + + P
Sbjct: 120 LSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL---PI 176
Query: 180 -WMAPEVMEQLHGYDFKADIWSFGITALE-LAHGHAPFSKYPPMKVL--------LMTLQ 229
WMAPE + + +D+W FG+ E L HG PF V+ L
Sbjct: 177 KWMAPESI-NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPP 235
Query: 230 NAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKL 268
N PP L ++ C DPS+RP +L
Sbjct: 236 NCPPTL------------YSLMTKCWAYDPSRRPRFTEL 262
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 106/221 (47%), Gaps = 10/221 (4%)
Query: 12 HYTLYEEVGQGVSASVHRALCIPF----NEIVAVKILDFERDNSDLSNISREAQTMILVD 67
H +++G+G SV P E+VAVK L + L + RE + + +
Sbjct: 17 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH-LRDFEREIEILKSLQ 75
Query: 68 HPNVLKSH--CSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLD 125
H N++K C NL ++M ++ GS L+ + + + + + ++ KG++
Sbjct: 76 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICKGME 134
Query: 126 YLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEV 185
YL +IHRD+ + NIL++ +K+GDFG++ L + +++ W APE
Sbjct: 135 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 194
Query: 186 MEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLM 226
+ + + +D+WSFG+ EL + SK PP + + M
Sbjct: 195 LTE-SKFSVASDVWSFGVVLYEL-FTYIEKSKSPPAEFMRM 233
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 116/267 (43%), Gaps = 24/267 (8%)
Query: 17 EEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPNVLKSHC 76
E +G+G + E++ +K L D +E + M ++HPNVLK
Sbjct: 16 EVLGKGCFGQAIKVTHRETGEVMVMKEL-IRFDEETQRTFLKEVKVMRCLEHPNVLKFIG 74
Query: 77 SFVSDHNLWVVMPFMSGGSCLHILKAA---YPDGFEEVVIATILREVLKGLDYLHHHGHI 133
D L + ++ GG+ I+K+ YP + V A +++ G+ YLH I
Sbjct: 75 VLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWS-QRVSFA---KDIASGMAYLHSMNII 130
Query: 134 HRDVKSGNILIDVRGAIKLGDFGVSACLFDSG------------DRQRMRNTFVGTPCWM 181
HRD+ S N L+ + + DFG++ + D DR++ R T VG P WM
Sbjct: 131 HRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKK-RYTVVGNPYWM 189
Query: 182 APEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDR 241
APE++ YD K D++SFGI E+ Y P + + L N LD
Sbjct: 190 APEMING-RSYDEKVDVFSFGIVLCEIIGRVNADPDYLP-RTMDFGL-NVRGFLDRYCPP 246
Query: 242 KFSKSFKQMIASCLVKDPSKRPSAKKL 268
SF + C DP KRPS KL
Sbjct: 247 NCPPSFFPITVRCCDLDPEKRPSFVKL 273
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 120/279 (43%), Gaps = 33/279 (11%)
Query: 4 KKYPIGAEHYTLYEEVGQGVSASVHRALCI-PFNEIVAVKILDFERDNSD--LSNISREA 60
+ Y I E L +G+G VH+ + + P N +AV I + SD +EA
Sbjct: 8 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEA 67
Query: 61 QTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKA-AYPDGFEEVVIATILRE 119
TM DHP+++K ++++ +W++M + G L+ Y +++ +
Sbjct: 68 LTMRQFDHPHIVK-LIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAY--Q 124
Query: 120 VLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPC 179
+ L YL +HRD+ + N+L+ +KLGDFG+S + DS + + P
Sbjct: 125 LSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL---PI 181
Query: 180 -WMAPEVMEQLHGYDFKADIWSFGITALE-LAHGHAPFSKYPPMKVL--------LMTLQ 229
WMAPE + + +D+W FG+ E L HG PF V+ L
Sbjct: 182 KWMAPESI-NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPP 240
Query: 230 NAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKL 268
N PP L ++ C DPS+RP +L
Sbjct: 241 NCPPTL------------YSLMTKCWAYDPSRRPRFTEL 267
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 111/242 (45%), Gaps = 16/242 (6%)
Query: 52 DLSNISREAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEV 111
++++ E++ + HP + +F + L VM + +GG L F E
Sbjct: 48 EVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERV--FTEE 105
Query: 112 VIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMR 171
E++ L+YLH ++RD+K N+++D G IK+ DFG+ C D M+
Sbjct: 106 RARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGL--CKEGISDGATMK 163
Query: 172 NTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNA 231
F GTP ++APEV+E + Y D W G+ E+ G PF ++ + L
Sbjct: 164 -XFCGTPEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILME- 220
Query: 232 PPGLDYERDRKFSKSFKQMIASCLVKDPSKR----PS-AKKLLKHSFFKQARSNEYIART 286
+ R S K ++A L KDP +R PS AK++++H FF + + +
Sbjct: 221 ----EIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKK 276
Query: 287 LL 288
LL
Sbjct: 277 LL 278
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 133/302 (44%), Gaps = 39/302 (12%)
Query: 16 YEEV---GQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPNVL 72
+EE+ GQG V +A + A+K LS I E + ++H V+
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIK--KIRHTEEKLSTILSEVMLLASLNHQYVV 65
Query: 73 KSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIAT------------ILREV 120
+ + +++ N M + S L I +G +I + + R++
Sbjct: 66 RYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQI 125
Query: 121 LKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN-------- 172
L+ L Y+H G IHRD+K NI ID +K+GDFG++ + S D ++ +
Sbjct: 126 LEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSD 185
Query: 173 ---TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ 229
+ +GT ++A EV++ Y+ K D++S GI E+ + PFS +L L+
Sbjct: 186 NLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILKKLR 242
Query: 230 NA----PPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSFFKQARSNEYIAR 285
+ PP D D K K K++I + DP+KRP A+ LL + +E I
Sbjct: 243 SVSIEFPPDFD---DNKM-KVEKKIIRLLIDHDPNKRPGARTLLNSGWLPVKHQDEVIKE 298
Query: 286 TL 287
L
Sbjct: 299 AL 300
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 115/252 (45%), Gaps = 10/252 (3%)
Query: 14 TLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPNVLK 73
T+ ++G G V+ + ++ VAVK L + D ++ +EA M + HPN+++
Sbjct: 17 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL--KEDTMEVEEFLKEAAVMKEIKHPNLVQ 74
Query: 74 SHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHI 133
+ +++ FM+ G+ L L+ VV+ + ++ ++YL I
Sbjct: 75 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFI 134
Query: 134 HRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYD 193
HRD+ + N L+ +K+ DFG+S + +GD W APE + + +
Sbjct: 135 HRDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAPAGAKFPIKWTAPESL-AYNKFS 191
Query: 194 FKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIA 252
K+D+W+FG+ E+A +G +P+ P L + ER + +++
Sbjct: 192 IKSDVWAFGVLLWEIATYGMSPY----PGIDLSQVYELLEKDYRMERPEGCPEKVYELMR 247
Query: 253 SCLVKDPSKRPS 264
+C +PS RPS
Sbjct: 248 ACWQWNPSDRPS 259
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 119/277 (42%), Gaps = 33/277 (11%)
Query: 6 YPIGAEHYTLYEEVGQGVSASVHRALCI-PFNEIVAVKILDFERDNSD--LSNISREAQT 62
Y I E L +G+G VH+ + + P N +AV I + SD +EA T
Sbjct: 2 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALT 61
Query: 63 MILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKA-AYPDGFEEVVIATILREVL 121
M DHP+++K ++++ +W++M + G L+ Y +++ ++
Sbjct: 62 MRQFDHPHIVKL-IGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAY--QLS 118
Query: 122 KGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPC-W 180
L YL +HRD+ + N+L+ +KLGDFG+S + DS + + P W
Sbjct: 119 TALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL---PIKW 175
Query: 181 MAPEVMEQLHGYDFKADIWSFGITALE-LAHGHAPFSKYPPMKVL--------LMTLQNA 231
MAPE + + +D+W FG+ E L HG PF V+ L N
Sbjct: 176 MAPESI-NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNC 234
Query: 232 PPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKL 268
PP L ++ C DPS+RP +L
Sbjct: 235 PPTL------------YSLMTKCWAYDPSRRPRFTEL 259
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 126/275 (45%), Gaps = 35/275 (12%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKIL---DFERDNSDLSNISREAQTMILVD 67
E + + +G+G +V+ A I+A+K+L E+ + + RE + +
Sbjct: 5 EDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLR 63
Query: 68 HPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYL 127
HPN+L+ + F +++++ + G+ L+ F+E AT + E+ L Y
Sbjct: 64 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYC 121
Query: 128 HHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVME 187
H IHRD+K N+L+ G +K+ DFG S S R T GT ++ PE++E
Sbjct: 122 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RRTTLCGTLDYLPPEMIE 176
Query: 188 -QLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKS 246
++H D K D+WS G+ E G PF T Q Y+R + +
Sbjct: 177 GRMH--DEKVDLWSLGVLCYEFLVGKPPFEA--------NTYQET-----YKRISRVEFT 221
Query: 247 F--------KQMIASCLVKDPSKRPSAKKLLKHSF 273
F + +I+ L +PS+RP +++L+H +
Sbjct: 222 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 256
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 111/242 (45%), Gaps = 16/242 (6%)
Query: 52 DLSNISREAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEV 111
++++ E++ + HP + +F + L VM + +GG L F E
Sbjct: 48 EVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERV--FTEE 105
Query: 112 VIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMR 171
E++ L+YLH ++RD+K N+++D G IK+ DFG+ C D M+
Sbjct: 106 RARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGL--CKEGISDGATMK 163
Query: 172 NTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNA 231
F GTP ++APEV+E + Y D W G+ E+ G PF ++ + L
Sbjct: 164 -XFCGTPEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILME- 220
Query: 232 PPGLDYERDRKFSKSFKQMIASCLVKDPSKR----PS-AKKLLKHSFFKQARSNEYIART 286
+ R S K ++A L KDP +R PS AK++++H FF + + +
Sbjct: 221 ----EIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKK 276
Query: 287 LL 288
LL
Sbjct: 277 LL 278
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 139/291 (47%), Gaps = 32/291 (10%)
Query: 13 YTLYEEV-GQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVD-HPN 70
Y L E+V G+G A V + + ++ AVKI++ ++ S + RE + + H N
Sbjct: 14 YQLQEDVLGEGAHARVQTCINLITSQEYAVKIIE-KQPGHIRSRVFREVEMLYQCQGHRN 72
Query: 71 VLKSHCSFVSDHNLWVVMPFMSGGSCL-HILKAAYPDGFEEVVIATILREVLKGLDYLHH 129
VL+ F + ++V M GGS L HI K + F E+ + ++++V LD+LH+
Sbjct: 73 VLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRH---FNELEASVVVQDVASALDFLHN 129
Query: 130 HGHIHRDVKSGNILID---VRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPC----WMA 182
G HRD+K NIL + +K+ DF + + + +GD + + TPC +MA
Sbjct: 130 KGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMA 189
Query: 183 PEVMEQLHG----YDFKADIWSFGITALELAHGHAPF-------------SKYPPMKVLL 225
PEV+E YD + D+WS G+ L G+ PF P + +L
Sbjct: 190 PEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNML 249
Query: 226 M-TLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSFFK 275
++Q + S + K +I+ LV+D +R SA ++L+H + +
Sbjct: 250 FESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQ 300
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 136/291 (46%), Gaps = 33/291 (11%)
Query: 5 KYPIGAEHYTLYEEVGQGVSASVHRALCIPFNE-------IVAVKILDFERDNSDLSNIS 57
K+ + TL + +G+G V A + ++ VAVK+L + DLS++
Sbjct: 75 KWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLV 134
Query: 58 REAQTMILV-DHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDG--------- 107
E + M ++ H N++ + D L+V++ + S G+ L+A P G
Sbjct: 135 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 194
Query: 108 -------FEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSAC 160
F+++V T ++ +G++YL IHRD+ + N+L+ +K+ DFG++
Sbjct: 195 VPEEQMTFKDLVSCTY--QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARD 252
Query: 161 LFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALEL-AHGHAPFSKYP 219
+ + ++ N + WMAPE + Y ++D+WSFG+ E+ G +P+
Sbjct: 253 INNIDYYKKTTNGRLPVK-WMAPEALFD-RVYTHQSDVWSFGVLMWEIFTLGGSPYPGI- 309
Query: 220 PMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLK 270
P++ L L+ G ++ + M+ C PS+RP+ K+L++
Sbjct: 310 PVEELFKLLKE---GHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 357
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 115/252 (45%), Gaps = 10/252 (3%)
Query: 14 TLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPNVLK 73
T+ ++G G V+ + ++ VAVK L + D ++ +EA M + HPN+++
Sbjct: 16 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL--KEDTMEVEEFLKEAAVMKEIKHPNLVQ 73
Query: 74 SHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHI 133
+ +++ FM+ G+ L L+ VV+ + ++ ++YL I
Sbjct: 74 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFI 133
Query: 134 HRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYD 193
HRD+ + N L+ +K+ DFG+S + +GD W APE + + +
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAHAGAKFPIKWTAPESL-AYNKFS 190
Query: 194 FKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIA 252
K+D+W+FG+ E+A +G +P+ P L + ER + +++
Sbjct: 191 IKSDVWAFGVLLWEIATYGMSPY----PGIDLSQVYELLEKDYRMERPEGCPEKVYELMR 246
Query: 253 SCLVKDPSKRPS 264
+C +PS RPS
Sbjct: 247 ACWQWNPSDRPS 258
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 124/274 (45%), Gaps = 23/274 (8%)
Query: 10 AEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHP 69
++ Y L +++G G NE+VAVK + ER N+ RE + HP
Sbjct: 18 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYI--ERGEKIDENVKREIINHRSLRHP 75
Query: 70 NVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHH 129
N+++ ++ +L +VM + SGG + A F E ++++ G+ Y H
Sbjct: 76 NIVRFKEVILTPTHLAIVMEYASGGELFERICNA--GRFSEDEARFFFQQLISGVSYCHA 133
Query: 130 HGHIHRDVKSGNILIDVRGA--IKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVME 187
HRD+K N L+D A +K+ FG S S + VGTP ++APEV+
Sbjct: 134 MQVCHRDLKLENTLLDGSPAPRLKICAFGYSK----SSVLHSQPKSTVGTPAYIAPEVLL 189
Query: 188 QLHGYDFK-ADIWSFGITALELAHGHAPFSKYPPMKVL------LMTLQNAPPGLDYERD 240
+ YD K AD+WS G+T + G PF K ++ +Q A P DY
Sbjct: 190 K-KEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIP--DYVH- 245
Query: 241 RKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSFF 274
S + +I+ V DP+KR S ++ H +F
Sbjct: 246 --ISPECRHLISRIFVADPAKRISIPEIRNHEWF 277
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 126/276 (45%), Gaps = 23/276 (8%)
Query: 4 KKYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKIL---DFERDNSDLSNISREA 60
KK E + + +G+G +V+ A I+A+K+L E+ + + RE
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREV 60
Query: 61 QTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREV 120
+ + HPN+L+ + F +++++ + G+ L+ F+E AT + E+
Sbjct: 61 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITEL 118
Query: 121 LKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCW 180
L Y H IHRD+K N+L+ G +K+ DFG S S R GT +
Sbjct: 119 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RRTDLCGTLDY 173
Query: 181 MAPEVME-QLHGYDFKADIWSFGITALELAHGHAPF--SKYPPMKVLLMTLQNAPPGLDY 237
+ PE++E ++H D K D+WS G+ E G PF + Y + ++ P
Sbjct: 174 LPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVT 231
Query: 238 ERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSF 273
E R +I+ L +PS+RP +++L+H +
Sbjct: 232 EGAR-------DLISRLLKHNPSQRPMLREVLEHPW 260
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 123/275 (44%), Gaps = 18/275 (6%)
Query: 7 PIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDF-ERDNSDLSNISREAQTMIL 65
P AE Y + +G G + +I+ K LD+ ++ + E +
Sbjct: 2 PSRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRE 61
Query: 66 VDHPNVLKSHCSFVSDHN--LWVVMPFMSGGSCLHILKAAYPDG--FEEVVIATILREVL 121
+ HPN+++ + + N L++VM + GG ++ + +E + ++ ++
Sbjct: 62 LKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLT 121
Query: 122 KGLDYLHHH---GH--IHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVG 176
L H GH +HRD+K N+ +D + +KLGDFG++ L FVG
Sbjct: 122 LALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL---NHDTSFAKAFVG 178
Query: 177 TPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLD 236
TP +M+PE M ++ Y+ K+DIWS G EL PF+ + ++ + +
Sbjct: 179 TPYYMSPEQMNRM-SYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIP 237
Query: 237 YERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKH 271
Y ++S ++I L RPS +++L++
Sbjct: 238 Y----RYSDELNEIITRMLNLKDYHRPSVEEILEN 268
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 105/218 (48%), Gaps = 16/218 (7%)
Query: 12 HYTLYEEVGQGVSASVHRALCIPFNEI---VAVKILDFER--DNSDLSNISREAQTMILV 66
H +E + + S R + + E A+KILD ++ + + E + + V
Sbjct: 39 HLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 67 DHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDY 126
+ P ++K SF + NL++VM +M GG L+ F E +++ +Y
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRI--GRFSEPHARFYAAQIVLTFEY 156
Query: 127 LHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN-TFVGTPCWMAPEV 185
LH I+RD+K N+LID +G IK+ DFG + R + R GTP ++APE+
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIKVADFGFAK-------RVKGRTWXLCGTPEYLAPEI 209
Query: 186 MEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKV 223
+ GY+ D W+ G+ E+A G+ PF P+++
Sbjct: 210 ILS-KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 105/218 (48%), Gaps = 16/218 (7%)
Query: 12 HYTLYEEVGQGVSASVHRALCIPFNEI---VAVKILDFER--DNSDLSNISREAQTMILV 66
H +E + + S R + + E A+KILD ++ + + E + + V
Sbjct: 39 HLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 67 DHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDY 126
+ P ++K SF + NL++VM +M GG L+ F E +++ +Y
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRI--GRFSEPHARFYAAQIVLTFEY 156
Query: 127 LHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN-TFVGTPCWMAPEV 185
LH I+RD+K N+LID +G IK+ DFG + R + R GTP ++APE+
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIKVADFGFAK-------RVKGRTWXLCGTPEYLAPEI 209
Query: 186 MEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKV 223
+ GY+ D W+ G+ E+A G+ PF P+++
Sbjct: 210 ILS-KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 111/242 (45%), Gaps = 16/242 (6%)
Query: 52 DLSNISREAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEV 111
++++ E++ + HP + +F + L VM + +GG L F E
Sbjct: 48 EVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERV--FTEE 105
Query: 112 VIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMR 171
E++ L+YLH ++RD+K N+++D G IK+ DFG+ C D M+
Sbjct: 106 RARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGL--CKEGISDGATMK 163
Query: 172 NTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNA 231
F GTP ++APEV+E + Y D W G+ E+ G PF ++ + L
Sbjct: 164 -XFCGTPEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILME- 220
Query: 232 PPGLDYERDRKFSKSFKQMIASCLVKDPSKR----PS-AKKLLKHSFFKQARSNEYIART 286
+ R S K ++A L KDP +R PS AK++++H FF + + +
Sbjct: 221 ----EIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKK 276
Query: 287 LL 288
LL
Sbjct: 277 LL 278
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 115/252 (45%), Gaps = 10/252 (3%)
Query: 14 TLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPNVLK 73
T+ ++G G V+ + ++ VAVK L + D ++ +EA M + HPN+++
Sbjct: 18 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL--KEDTMEVEEFLKEAAVMKEIKHPNLVQ 75
Query: 74 SHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHI 133
+ +++ FM+ G+ L L+ VV+ + ++ ++YL I
Sbjct: 76 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFI 135
Query: 134 HRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYD 193
HRD+ + N L+ +K+ DFG+S + +GD W APE + + +
Sbjct: 136 HRDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAPAGAKFPIKWTAPESL-AYNKFS 192
Query: 194 FKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIA 252
K+D+W+FG+ E+A +G +P+ P L + ER + +++
Sbjct: 193 IKSDVWAFGVLLWEIATYGMSPY----PGIDLSQVYELLEKDYRMERPEGCPEKVYELMR 248
Query: 253 SCLVKDPSKRPS 264
+C +PS RPS
Sbjct: 249 ACWQWNPSDRPS 260
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 126/276 (45%), Gaps = 23/276 (8%)
Query: 4 KKYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKIL---DFERDNSDLSNISREA 60
KK E + + +G+G +V+ A I+A+K+L E+ + + RE
Sbjct: 1 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREV 59
Query: 61 QTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREV 120
+ + HPN+L+ + F +++++ + G+ L+ F+E AT + E+
Sbjct: 60 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITEL 117
Query: 121 LKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCW 180
L Y H IHRD+K N+L+ G +K+ DFG S S R GT +
Sbjct: 118 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RRTDLCGTLDY 172
Query: 181 MAPEVME-QLHGYDFKADIWSFGITALELAHGHAPF--SKYPPMKVLLMTLQNAPPGLDY 237
+ PE++E ++H D K D+WS G+ E G PF + Y + ++ P
Sbjct: 173 LPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVT 230
Query: 238 ERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSF 273
E R +I+ L +PS+RP +++L+H +
Sbjct: 231 EGAR-------DLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 118/271 (43%), Gaps = 16/271 (5%)
Query: 1 MDKKKYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREA 60
+ K + I E L ++GQG V +N V I + +EA
Sbjct: 8 LAKDAWEIPRESLRLEVKLGQGCFGEVWMGT---WNGTTRVAIKTLKPGTMSPEAFLQEA 64
Query: 61 QTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREV 120
Q M + H +++ + + VS+ +++V +MS GS L LK + + ++
Sbjct: 65 QVMKKLRHEKLVQLY-AVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQI 123
Query: 121 LKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPC- 179
G+ Y+ ++HRD+++ NIL+ K+ DFG++ + D+ R F P
Sbjct: 124 ASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF---PIK 180
Query: 180 WMAPEVMEQLHG-YDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLDY 237
W APE L+G + K+D+WSFGI EL G P+ P V L G
Sbjct: 181 WTAPEA--ALYGRFTIKSDVWSFGILLTELTTKGRVPY----PGMVNREVLDQVERGYRM 234
Query: 238 ERDRKFSKSFKQMIASCLVKDPSKRPSAKKL 268
+ +S ++ C KDP +RP+ + L
Sbjct: 235 PCPPECPESLHDLMCQCWRKDPEERPTFEYL 265
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 126/276 (45%), Gaps = 23/276 (8%)
Query: 4 KKYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKIL---DFERDNSDLSNISREA 60
KK E + + +G+G +V+ A I+A+K+L E+ + + RE
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREV 64
Query: 61 QTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREV 120
+ + HPN+L+ + F +++++ + G+ L+ F+E AT + E+
Sbjct: 65 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITEL 122
Query: 121 LKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCW 180
L Y H IHRD+K N+L+ G +K+ DFG S S R GT +
Sbjct: 123 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RRTDLCGTLDY 177
Query: 181 MAPEVME-QLHGYDFKADIWSFGITALELAHGHAPF--SKYPPMKVLLMTLQNAPPGLDY 237
+ PE++E ++H D K D+WS G+ E G PF + Y + ++ P
Sbjct: 178 LPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVT 235
Query: 238 ERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSF 273
E R +I+ L +PS+RP +++L+H +
Sbjct: 236 EGAR-------DLISRLLKHNPSQRPMLREVLEHPW 264
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 115/252 (45%), Gaps = 10/252 (3%)
Query: 14 TLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPNVLK 73
T+ ++G G V+ + ++ VAVK L + D ++ +EA M + HPN+++
Sbjct: 16 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL--KEDTMEVEEFLKEAAVMKEIKHPNLVQ 73
Query: 74 SHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHI 133
+ +++ FM+ G+ L L+ VV+ + ++ ++YL I
Sbjct: 74 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFI 133
Query: 134 HRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYD 193
HRD+ + N L+ +K+ DFG+S + +GD W APE + + +
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAHAGAKFPIKWTAPESL-AYNKFS 190
Query: 194 FKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIA 252
K+D+W+FG+ E+A +G +P+ P L + ER + +++
Sbjct: 191 IKSDVWAFGVLLWEIATYGMSPY----PGIDLSQVYELLEKDYRMERPEGCPEKVYELMR 246
Query: 253 SCLVKDPSKRPS 264
+C +PS RPS
Sbjct: 247 ACWQWNPSDRPS 258
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 106/221 (47%), Gaps = 10/221 (4%)
Query: 12 HYTLYEEVGQGVSASVHRALCIPF----NEIVAVKILDFERDNSDLSNISREAQTMILVD 67
H +++G+G SV P E+VAVK L + L + RE + + +
Sbjct: 29 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE-EHLRDFEREIEILKSLQ 87
Query: 68 HPNVLKSH--CSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLD 125
H N++K C NL ++M ++ GS L+ + + + + + ++ KG++
Sbjct: 88 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICKGME 146
Query: 126 YLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEV 185
YL +IHRD+ + NIL++ +K+GDFG++ L + +++ W APE
Sbjct: 147 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 206
Query: 186 MEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLM 226
+ + + +D+WSFG+ EL + SK PP + + M
Sbjct: 207 LTE-SKFSVASDVWSFGVVLYEL-FTYIEKSKSPPAEFMRM 245
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 106/221 (47%), Gaps = 10/221 (4%)
Query: 12 HYTLYEEVGQGVSASVHRALCIPF----NEIVAVKILDFERDNSDLSNISREAQTMILVD 67
H +++G+G SV P E+VAVK L + L + RE + + +
Sbjct: 29 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE-EHLRDFEREIEILKSLQ 87
Query: 68 HPNVLKSH--CSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLD 125
H N++K C NL ++M ++ GS L+ + + + + + ++ KG++
Sbjct: 88 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICKGME 146
Query: 126 YLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEV 185
YL +IHRD+ + NIL++ +K+GDFG++ L + +++ W APE
Sbjct: 147 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 206
Query: 186 MEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLM 226
+ + + +D+WSFG+ EL + SK PP + + M
Sbjct: 207 LTE-SKFSVASDVWSFGVVLYEL-FTYIEKSKSPPAEFMRM 245
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 136/291 (46%), Gaps = 33/291 (11%)
Query: 5 KYPIGAEHYTLYEEVGQGVSASVHRALCIPFNE-------IVAVKILDFERDNSDLSNIS 57
K+ + TL + +G+G V A + ++ VAVK+L + DLS++
Sbjct: 29 KWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLV 88
Query: 58 REAQTMILV-DHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDG--------- 107
E + M ++ H N++ + D L+V++ + S G+ L+A P G
Sbjct: 89 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINR 148
Query: 108 -------FEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSAC 160
F+++V T ++ +G++YL IHRD+ + N+L+ +K+ DFG++
Sbjct: 149 VPEEQMTFKDLVSCTY--QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARD 206
Query: 161 LFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALEL-AHGHAPFSKYP 219
+ + ++ N + WMAPE + Y ++D+WSFG+ E+ G +P+
Sbjct: 207 INNIDYYKKTTNGRLPVK-WMAPEALFD-RVYTHQSDVWSFGVLMWEIFTLGGSPYPGI- 263
Query: 220 PMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLK 270
P++ L L+ G ++ + M+ C PS+RP+ K+L++
Sbjct: 264 PVEELFKLLKE---GHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 117/269 (43%), Gaps = 16/269 (5%)
Query: 3 KKKYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQT 62
K + I E L ++GQG V +N V I + +EAQ
Sbjct: 1 KDAWEIPRESLRLEVKLGQGCFGEVWMGT---WNGTTRVAIKTLKPGTMSPEAFLQEAQV 57
Query: 63 MILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLK 122
M + H +++ + + VS+ +++V +MS GS L LK + + ++
Sbjct: 58 MKKLRHEKLVQLY-AVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIAS 116
Query: 123 GLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPC-WM 181
G+ Y+ ++HRD+++ NIL+ K+ DFG++ + D+ R F P W
Sbjct: 117 GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF---PIKWT 173
Query: 182 APEVMEQLHG-YDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLDYER 239
APE L+G + K+D+WSFGI EL G P+ P V L G
Sbjct: 174 APEA--ALYGRFTIKSDVWSFGILLTELTTKGRVPY----PGMVNREVLDQVERGYRMPC 227
Query: 240 DRKFSKSFKQMIASCLVKDPSKRPSAKKL 268
+ +S ++ C KDP +RP+ + L
Sbjct: 228 PPECPESLHDLMCQCWRKDPEERPTFEYL 256
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 136/291 (46%), Gaps = 33/291 (11%)
Query: 5 KYPIGAEHYTLYEEVGQGVSASVHRALCIPFNE-------IVAVKILDFERDNSDLSNIS 57
K+ + TL + +G+G V A + ++ VAVK+L + DLS++
Sbjct: 16 KWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLV 75
Query: 58 REAQTMILV-DHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDG--------- 107
E + M ++ H N++ + D L+V++ + S G+ L+A P G
Sbjct: 76 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 135
Query: 108 -------FEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSAC 160
F+++V T ++ +G++YL IHRD+ + N+L+ +K+ DFG++
Sbjct: 136 VPEEQMTFKDLVSCTY--QLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLARD 193
Query: 161 LFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALEL-AHGHAPFSKYP 219
+ + ++ N + WMAPE + Y ++D+WSFG+ E+ G +P+
Sbjct: 194 INNIDYYKKTTNGRLPVK-WMAPEALFD-RVYTHQSDVWSFGVLMWEIFTLGGSPYPGI- 250
Query: 220 PMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLK 270
P++ L L+ G ++ + M+ C PS+RP+ K+L++
Sbjct: 251 PVEELFKLLKE---GHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 298
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 118/271 (43%), Gaps = 16/271 (5%)
Query: 1 MDKKKYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREA 60
+ K + I E L ++GQG V +N V I + +EA
Sbjct: 8 LAKDAWEIPRESLRLEVKLGQGCFGEVWMGT---WNGTTRVAIKTLKPGTMSPEAFLQEA 64
Query: 61 QTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREV 120
Q M + H +++ + + VS+ +++V +MS GS L LK + + ++
Sbjct: 65 QVMKKLRHEKLVQLY-AVVSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQI 123
Query: 121 LKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPC- 179
G+ Y+ ++HRD+++ NIL+ K+ DFG++ + D+ R F P
Sbjct: 124 ASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF---PIK 180
Query: 180 WMAPEVMEQLHG-YDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLDY 237
W APE L+G + K+D+WSFGI EL G P+ P V L G
Sbjct: 181 WTAPEA--ALYGRFTIKSDVWSFGILLTELTTKGRVPY----PGMVNREVLDQVERGYRM 234
Query: 238 ERDRKFSKSFKQMIASCLVKDPSKRPSAKKL 268
+ +S ++ C KDP +RP+ + L
Sbjct: 235 PCPPECPESLHDLMCQCWRKDPEERPTFEYL 265
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 130/284 (45%), Gaps = 40/284 (14%)
Query: 7 PIGAEHYTLYE-----EVGQGVSASVHRALCIPFNEIVAVKIL---DFERDNSDLSNISR 58
P+G+ + L + +G+G +V+ A I+A+K+L E+ + + R
Sbjct: 2 PLGSRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRR 60
Query: 59 EAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILR 118
E + + HPN+L+ + F +++++ + G+ L+ F+E AT +
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYIT 118
Query: 119 EVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTP 178
E+ L Y H IHRD+K N+L+ G +K+ DFG S S R+ GT
Sbjct: 119 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RRDDLCGTL 173
Query: 179 CWMAPEVME-QLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDY 237
++ PE++E ++H D K D+WS G+ E G PF T Q Y
Sbjct: 174 DYLPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGKPPFEA--------NTYQET-----Y 218
Query: 238 ERDRKFSKSF--------KQMIASCLVKDPSKRPSAKKLLKHSF 273
+R + +F + +I+ L +PS+RP +++L+H +
Sbjct: 219 KRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 136/291 (46%), Gaps = 33/291 (11%)
Query: 5 KYPIGAEHYTLYEEVGQGVSASVHRALCIPFNE-------IVAVKILDFERDNSDLSNIS 57
K+ + TL + +G+G V A + ++ VAVK+L + DLS++
Sbjct: 29 KWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLV 88
Query: 58 REAQTMILV-DHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDG--------- 107
E + M ++ H N++ + D L+V++ + S G+ L+A P G
Sbjct: 89 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 148
Query: 108 -------FEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSAC 160
F+++V T ++ +G++YL IHRD+ + N+L+ +K+ DFG++
Sbjct: 149 VPEEQMTFKDLVSCTY--QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARD 206
Query: 161 LFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALEL-AHGHAPFSKYP 219
+ + ++ N + WMAPE + Y ++D+WSFG+ E+ G +P+
Sbjct: 207 INNIDYYKKTTNGRLPVK-WMAPEALFD-RVYTHQSDVWSFGVLMWEIFTLGGSPYPGI- 263
Query: 220 PMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLK 270
P++ L L+ G ++ + M+ C PS+RP+ K+L++
Sbjct: 264 PVEELFKLLKE---GHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 136/291 (46%), Gaps = 33/291 (11%)
Query: 5 KYPIGAEHYTLYEEVGQGVSASVHRALCIPFNE-------IVAVKILDFERDNSDLSNIS 57
K+ + TL + +G+G V A + ++ VAVK+L + DLS++
Sbjct: 29 KWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLV 88
Query: 58 REAQTMILV-DHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDG--------- 107
E + M ++ H N++ + D L+V++ + S G+ L+A P G
Sbjct: 89 SEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 148
Query: 108 -------FEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSAC 160
F+++V T ++ +G++YL IHRD+ + N+L+ +K+ DFG++
Sbjct: 149 VPEEQMTFKDLVSCTY--QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARD 206
Query: 161 LFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALEL-AHGHAPFSKYP 219
+ + ++ N + WMAPE + Y ++D+WSFG+ E+ G +P+
Sbjct: 207 INNIDYYKKTTNGRLPVK-WMAPEALFD-RVYTHQSDVWSFGVLMWEIFTLGGSPYPGI- 263
Query: 220 PMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLK 270
P++ L L+ G ++ + M+ C PS+RP+ K+L++
Sbjct: 264 PVEELFKLLKE---GHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 124/269 (46%), Gaps = 23/269 (8%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKIL---DFERDNSDLSNISREAQTMILVD 67
E + + +G+G +V+ A I+A+K+L E+ + + RE + +
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLR 66
Query: 68 HPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYL 127
HPN+L+ + F +++++ + G+ L+ F+E AT + E+ L Y
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYC 124
Query: 128 HHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVME 187
H IHRD+K N+L+ G +K+ DFG S S R GT ++ PE++E
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RRTELCGTLDYLPPEMIE 179
Query: 188 -QLHGYDFKADIWSFGITALELAHGHAPF--SKYPPMKVLLMTLQNAPPGLDYERDRKFS 244
++H D K D+WS G+ E G PF + Y + ++ P E R
Sbjct: 180 GRMH--DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGAR--- 234
Query: 245 KSFKQMIASCLVKDPSKRPSAKKLLKHSF 273
+I+ L +PS+RP +++L+H +
Sbjct: 235 ----DLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 136/291 (46%), Gaps = 33/291 (11%)
Query: 5 KYPIGAEHYTLYEEVGQGVSASVHRALCIPFNE-------IVAVKILDFERDNSDLSNIS 57
K+ + TL + +G+G V A + ++ VAVK+L + DLS++
Sbjct: 18 KWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLV 77
Query: 58 REAQTMILV-DHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDG--------- 107
E + M ++ H N++ + D L+V++ + S G+ L+A P G
Sbjct: 78 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 137
Query: 108 -------FEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSAC 160
F+++V T ++ +G++YL IHRD+ + N+L+ +K+ DFG++
Sbjct: 138 VPEEQMTFKDLVSCTY--QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARD 195
Query: 161 LFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALEL-AHGHAPFSKYP 219
+ + ++ N + WMAPE + Y ++D+WSFG+ E+ G +P+
Sbjct: 196 INNIDYYKKTTNGRLPVK-WMAPEALFD-RVYTHQSDVWSFGVLMWEIFTLGGSPYPGI- 252
Query: 220 PMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLK 270
P++ L L+ G ++ + M+ C PS+RP+ K+L++
Sbjct: 253 PVEELFKLLKE---GHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 300
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 136/291 (46%), Gaps = 33/291 (11%)
Query: 5 KYPIGAEHYTLYEEVGQGVSASVHRALCIPFNE-------IVAVKILDFERDNSDLSNIS 57
K+ + TL + +G+G V A + ++ VAVK+L + DLS++
Sbjct: 21 KWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLV 80
Query: 58 REAQTMILV-DHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDG--------- 107
E + M ++ H N++ + D L+V++ + S G+ L+A P G
Sbjct: 81 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 140
Query: 108 -------FEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSAC 160
F+++V T ++ +G++YL IHRD+ + N+L+ +K+ DFG++
Sbjct: 141 VPEEQMTFKDLVSCTY--QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARD 198
Query: 161 LFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALEL-AHGHAPFSKYP 219
+ + ++ N + WMAPE + Y ++D+WSFG+ E+ G +P+
Sbjct: 199 INNIDYYKKTTNGRLPVK-WMAPEALFD-RVYTHQSDVWSFGVLMWEIFTLGGSPYPGI- 255
Query: 220 PMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLK 270
P++ L L+ G ++ + M+ C PS+RP+ K+L++
Sbjct: 256 PVEELFKLLKE---GHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 303
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 127/274 (46%), Gaps = 23/274 (8%)
Query: 10 AEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHP 69
++ Y L +++G G NE+VAVK + ER N+ RE + HP
Sbjct: 18 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYI--ERGEKIDENVKREIINHRSLRHP 75
Query: 70 NVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHH 129
N+++ ++ +L +VM + SGG + A F E ++++ G+ Y H
Sbjct: 76 NIVRFKEVILTPTHLAIVMEYASGGELFERICNA--GRFSEDEARFFFQQLISGVSYCHA 133
Query: 130 HGHIHRDVKSGNILIDVRGA--IKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVME 187
HRD+K N L+D A +K+ FG S S + ++T VGTP ++APEV+
Sbjct: 134 MQVCHRDLKLENTLLDGSPAPRLKICAFGYSKS---SVLHSQPKDT-VGTPAYIAPEVLL 189
Query: 188 QLHGYDFK-ADIWSFGITALELAHGHAPFSKYPPMKVL------LMTLQNAPPGLDYERD 240
+ YD K AD+WS G+T + G PF K ++ +Q A P DY
Sbjct: 190 K-KEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIP--DYVH- 245
Query: 241 RKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSFF 274
S + +I+ V DP+KR S ++ H +F
Sbjct: 246 --ISPECRHLISRIFVADPAKRISIPEIRNHEWF 277
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 136/291 (46%), Gaps = 33/291 (11%)
Query: 5 KYPIGAEHYTLYEEVGQGVSASVHRALCIPFNE-------IVAVKILDFERDNSDLSNIS 57
K+ + TL + +G+G V A + ++ VAVK+L + DLS++
Sbjct: 29 KWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLV 88
Query: 58 REAQTMILV-DHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDG--------- 107
E + M ++ H N++ + D L+V++ + S G+ L+A P G
Sbjct: 89 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINR 148
Query: 108 -------FEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSAC 160
F+++V T ++ +G++YL IHRD+ + N+L+ +K+ DFG++
Sbjct: 149 VPEEQMTFKDLVSCTY--QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARD 206
Query: 161 LFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALEL-AHGHAPFSKYP 219
+ + ++ N + WMAPE + Y ++D+WSFG+ E+ G +P+
Sbjct: 207 INNIDYYKKTTNGRLPVK-WMAPEALFD-RVYTHQSDVWSFGVLMWEIFTLGGSPYPGI- 263
Query: 220 PMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLK 270
P++ L L+ G ++ + M+ C PS+RP+ K+L++
Sbjct: 264 PVEELFKLLKE---GHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 124/283 (43%), Gaps = 44/283 (15%)
Query: 12 HYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFER----------------------- 48
YTL +E+G+G V A N A+K+L ++
Sbjct: 14 QYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGC 73
Query: 49 --DNSDLSNISREAQTMILVDHPNVLKSHCSFVSDHN---LWVVMPFMSGGSCLHI--LK 101
+ + +E + +DHPNV+K + D N L++V ++ G + + LK
Sbjct: 74 IQPRGPIEQVYQEIAILKKLDHPNVVKL-VEVLDDPNEDHLYMVFELVNQGPVMEVPTLK 132
Query: 102 AAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACL 161
D ++++KG++YLH+ IHRD+K N+L+ G IK+ DFGVS
Sbjct: 133 PLSEDQAR-----FYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEF 187
Query: 162 FDSGDRQRMRNTFVGTPCWMAPEVMEQLHG-YDFKA-DIWSFGITALELAHGHAPFSKYP 219
G + NT VGTP +MAPE + + + KA D+W+ G+T G PF
Sbjct: 188 --KGSDALLSNT-VGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMD-- 242
Query: 220 PMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKR 262
+++ + + L++ ++ K +I L K+P R
Sbjct: 243 -ERIMCLHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESR 284
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 136/291 (46%), Gaps = 33/291 (11%)
Query: 5 KYPIGAEHYTLYEEVGQGVSASVHRALCIPFNE-------IVAVKILDFERDNSDLSNIS 57
K+ + TL + +G+G V A + ++ VAVK+L + DLS++
Sbjct: 29 KWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLV 88
Query: 58 REAQTMILV-DHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDG--------- 107
E + M ++ H N++ + D L+V++ + S G+ L+A P G
Sbjct: 89 SEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 148
Query: 108 -------FEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSAC 160
F+++V T ++ +G++YL IHRD+ + N+L+ +K+ DFG++
Sbjct: 149 VPEEQMTFKDLVSCTY--QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARD 206
Query: 161 LFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALEL-AHGHAPFSKYP 219
+ + ++ N + WMAPE + Y ++D+WSFG+ E+ G +P+
Sbjct: 207 INNIDYYKKTTNGRLPVK-WMAPEALFD-RVYTHQSDVWSFGVLMWEIFTLGGSPYPGI- 263
Query: 220 PMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLK 270
P++ L L+ G ++ + M+ C PS+RP+ K+L++
Sbjct: 264 PVEELFKLLKE---GHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 115/252 (45%), Gaps = 10/252 (3%)
Query: 14 TLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPNVLK 73
T+ ++G G V+ + ++ VAVK L + D ++ +EA M + HPN+++
Sbjct: 220 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL--KEDTMEVEEFLKEAAVMKEIKHPNLVQ 277
Query: 74 SHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHI 133
+ +++ FM+ G+ L L+ VV+ + ++ ++YL I
Sbjct: 278 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFI 337
Query: 134 HRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYD 193
HR++ + N L+ +K+ DFG+S + +GD W APE + + +
Sbjct: 338 HRNLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAHAGAKFPIKWTAPESL-AYNKFS 394
Query: 194 FKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIA 252
K+D+W+FG+ E+A +G +P+ P L + ER + +++
Sbjct: 395 IKSDVWAFGVLLWEIATYGMSPY----PGIDLSQVYELLEKDYRMERPEGCPEKVYELMR 450
Query: 253 SCLVKDPSKRPS 264
+C +PS RPS
Sbjct: 451 ACWQWNPSDRPS 462
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 128/275 (46%), Gaps = 25/275 (9%)
Query: 10 AEHYTLYEEVGQGVSASVHRALCIPFN-EIVAVKILDFERDNSDLSNISREAQTMILVDH 68
++ Y +++G G + V R + E+VAVK + ER + N+ RE + H
Sbjct: 19 SDRYDFVKDIGSG-NFGVARLMRDKLTKELVAVKYI--ERGAAIDENVQREIINHRSLRH 75
Query: 69 PNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLH 128
PN+++ ++ +L ++M + SGG + A F E +++L G+ Y H
Sbjct: 76 PNIVRFKEVILTPTHLAIIMEYASGGELYERICNA--GRFSEDEARFFFQQLLSGVSYCH 133
Query: 129 HHGHIHRDVKSGNILIDVRGA--IKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVM 186
HRD+K N L+D A +K+ DFG S S + VGTP ++APEV+
Sbjct: 134 SMQICHRDLKLENTLLDGSPAPRLKICDFGYSK----SSVLHSQPKSTVGTPAYIAPEVL 189
Query: 187 EQLHGYDFK-ADIWSFGITALELAHGHAPFS------KYPPMKVLLMTLQNAPPGLDYER 239
+ YD K AD+WS G+T + G PF Y +++++ + P
Sbjct: 190 LR-QEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPD----- 243
Query: 240 DRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSFF 274
D + S +I+ V DP+ R S ++ HS+F
Sbjct: 244 DIRISPECCHLISRIFVADPATRISIPEIKTHSWF 278
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 125/261 (47%), Gaps = 25/261 (9%)
Query: 17 EEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPNVLKSHC 76
E VG+G V +A + VA+K ++ E S+ E + + V+HPN++K +
Sbjct: 15 EVVGRGAFGVVCKAKWRAKD--VAIKQIESE---SERKAFIVELRQLSRVNHPNIVKLYG 69
Query: 77 SFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIA-TILREVLKGLDYLHH---HGH 132
+ ++ L VM + GGS ++L A P + A + + +G+ YLH
Sbjct: 70 ACLNPVCL--VMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKAL 127
Query: 133 IHRDVKSGNILIDVRGAI-KLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHG 191
IHRD+K N+L+ G + K+ DFG +AC D Q G+ WMAPEV E
Sbjct: 128 IHRDLKPPNLLLVAGGTVLKICDFG-TAC-----DIQTHMTNNKGSAAWMAPEVFEG-SN 180
Query: 192 YDFKADIWSFGITALELAHGHAPFSKY--PPMKVLLMTLQNAPPGLDYERDRKFSKSFKQ 249
Y K D++S+GI E+ PF + P +++ P L + K +
Sbjct: 181 YSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLI----KNLPKPIES 236
Query: 250 MIASCLVKDPSKRPSAKKLLK 270
++ C KDPS+RPS ++++K
Sbjct: 237 LMTRCWSKDPSQRPSMEEIVK 257
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 126/275 (45%), Gaps = 35/275 (12%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKIL---DFERDNSDLSNISREAQTMILVD 67
E + + +G+G +V+ A I+A+K+L E+ + + RE + +
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLR 66
Query: 68 HPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYL 127
HPN+L+ + F +++++ + G+ L+ F+E AT + E+ L Y
Sbjct: 67 HPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYC 124
Query: 128 HHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVME 187
H IHRD+K N+L+ G +K+ DFG S S R GT ++ PE++E
Sbjct: 125 HSKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RRAALCGTLDYLPPEMIE 179
Query: 188 -QLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKS 246
++H D K D+WS G+ E G PF T Q+ Y+R + +
Sbjct: 180 GRMH--DEKVDLWSLGVLCYEFLVGKPPFEA--------NTYQDT-----YKRISRVEFT 224
Query: 247 F--------KQMIASCLVKDPSKRPSAKKLLKHSF 273
F + +I+ L +PS+RP +++L+H +
Sbjct: 225 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 126/286 (44%), Gaps = 23/286 (8%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPN 70
E Y + E++G+G VHR + + K + + +D + +E + + H N
Sbjct: 5 EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK--GTDQVLVKKEISILNIARHRN 62
Query: 71 VLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFE--EVVIATILREVLKGLDYLH 128
+L H SF S L ++ F+SG L I + FE E I + + +V + L +LH
Sbjct: 63 ILHLHESFESMEELVMIFEFISG---LDIFERINTSAFELNEREIVSYVHQVCEALQFLH 119
Query: 129 HHGHIHRDVKSGNILIDVR--GAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVM 186
H H D++ NI+ R IK+ +FG A GD R+ T P + APEV
Sbjct: 120 SHNIGHFDIRPENIIYQTRRSSTIKIIEFG-QARQLKPGDNFRLLFT---APEYYAPEV- 174
Query: 187 EQLHGYDF---KADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKF 243
H +D D+WS G L G PF ++ + + NA D E ++
Sbjct: 175 ---HQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQI-IENIMNAEYTFDEEAFKEI 230
Query: 244 SKSFKQMIASCLVKDPSKRPSAKKLLKHSFFKQA--RSNEYIARTL 287
S + LVK+ R +A + L+H + KQ R + + RTL
Sbjct: 231 SIEAMDFVDRLLVKERKSRMTASEALQHPWLKQKIERVSTKVIRTL 276
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 124/269 (46%), Gaps = 23/269 (8%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKIL---DFERDNSDLSNISREAQTMILVD 67
E + + +G+G +V+ A I+A+K+L E+ + + RE + +
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLR 69
Query: 68 HPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYL 127
HPN+L+ + F +++++ + G+ L+ F+E AT + E+ L Y
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYC 127
Query: 128 HHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVME 187
H IHRD+K N+L+ G +K+ DFG S S R GT ++ PE++E
Sbjct: 128 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RRAALCGTLDYLPPEMIE 182
Query: 188 -QLHGYDFKADIWSFGITALELAHGHAPF--SKYPPMKVLLMTLQNAPPGLDYERDRKFS 244
++H D K D+WS G+ E G PF + Y + ++ P E R
Sbjct: 183 GRMH--DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGAR--- 237
Query: 245 KSFKQMIASCLVKDPSKRPSAKKLLKHSF 273
+I+ L +PS+RP +++L+H +
Sbjct: 238 ----DLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 117/256 (45%), Gaps = 10/256 (3%)
Query: 14 TLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPNVLK 73
T+ ++G G V+ + ++ VAVK L + D ++ +EA M + HPN+++
Sbjct: 223 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL--KEDTMEVEEFLKEAAVMKEIKHPNLVQ 280
Query: 74 SHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHI 133
+ +++ FM+ G+ L L+ VV+ + ++ ++YL I
Sbjct: 281 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFI 340
Query: 134 HRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYD 193
HR++ + N L+ +K+ DFG+S + +GD W APE + + +
Sbjct: 341 HRNLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAHAGAKFPIKWTAPESL-AYNKFS 397
Query: 194 FKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIA 252
K+D+W+FG+ E+A +G +P+ P L + ER + +++
Sbjct: 398 IKSDVWAFGVLLWEIATYGMSPY----PGIDLSQVYELLEKDYRMERPEGCPEKVYELMR 453
Query: 253 SCLVKDPSKRPSAKKL 268
+C +PS RPS ++
Sbjct: 454 ACWQWNPSDRPSFAEI 469
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 136/291 (46%), Gaps = 33/291 (11%)
Query: 5 KYPIGAEHYTLYEEVGQGVSASVHRALCIPFNE-------IVAVKILDFERDNSDLSNIS 57
K+ + TL + +G+G V A + ++ VAVK+L + DLS++
Sbjct: 29 KWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLV 88
Query: 58 REAQTMILV-DHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDG--------- 107
E + M ++ H N++ + D L+V++ + S G+ L+A P G
Sbjct: 89 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 148
Query: 108 -------FEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSAC 160
F+++V T ++ +G++YL IHRD+ + N+L+ +++ DFG++
Sbjct: 149 VPEEQMTFKDLVSCTY--QLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLARD 206
Query: 161 LFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALEL-AHGHAPFSKYP 219
+ + ++ N + WMAPE + Y ++D+WSFG+ E+ G +P+
Sbjct: 207 INNIDYYKKTTNGRLPVK-WMAPEALFD-RVYTHQSDVWSFGVLMWEIFTLGGSPYPGI- 263
Query: 220 PMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLK 270
P++ L L+ G ++ + M+ C PS+RP+ K+L++
Sbjct: 264 PVEELFKLLKE---GHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 124/269 (46%), Gaps = 23/269 (8%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKIL---DFERDNSDLSNISREAQTMILVD 67
E + + +G+G +V+ A I+A+K+L E+ + + RE + +
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLR 66
Query: 68 HPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYL 127
HPN+L+ + F +++++ + G+ L+ F+E AT + E+ L Y
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYC 124
Query: 128 HHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVME 187
H IHRD+K N+L+ G +K+ DFG S S R GT ++ PE++E
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RRTDLCGTLDYLPPEMIE 179
Query: 188 -QLHGYDFKADIWSFGITALELAHGHAPF--SKYPPMKVLLMTLQNAPPGLDYERDRKFS 244
++H D K D+WS G+ E G PF + Y + ++ P E R
Sbjct: 180 GRMH--DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGAR--- 234
Query: 245 KSFKQMIASCLVKDPSKRPSAKKLLKHSF 273
+I+ L +PS+RP +++L+H +
Sbjct: 235 ----DLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 116/266 (43%), Gaps = 16/266 (6%)
Query: 6 YPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMIL 65
+ I E L ++GQG V +N V I + +EAQ M
Sbjct: 2 WEIPRESLRLEVKLGQGCFGEVWMGT---WNGTTRVAIKTLKPGTMSPEAFLQEAQVMKK 58
Query: 66 VDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLD 125
+ H +++ + + VS+ +++V +MS GS L LK + + ++ G+
Sbjct: 59 LRHEKLVQLY-AVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMA 117
Query: 126 YLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPC-WMAPE 184
Y+ ++HRD+++ NIL+ K+ DFG++ + D+ R F P W APE
Sbjct: 118 YVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF---PIKWTAPE 174
Query: 185 VMEQLHG-YDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRK 242
L+G + K+D+WSFGI EL G P+ P V L G +
Sbjct: 175 A--ALYGRFTIKSDVWSFGILLTELTTKGRVPY----PGMVNREVLDQVERGYRMPCPPE 228
Query: 243 FSKSFKQMIASCLVKDPSKRPSAKKL 268
+S ++ C KDP +RP+ + L
Sbjct: 229 CPESLHDLMCQCWRKDPEERPTFEYL 254
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 125/261 (47%), Gaps = 25/261 (9%)
Query: 17 EEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPNVLKSHC 76
E VG+G V +A + VA+K ++ E S+ E + + V+HPN++K +
Sbjct: 14 EVVGRGAFGVVCKAKWRAKD--VAIKQIESE---SERKAFIVELRQLSRVNHPNIVKLYG 68
Query: 77 SFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIA-TILREVLKGLDYLHH---HGH 132
+ ++ L VM + GGS ++L A P + A + + +G+ YLH
Sbjct: 69 ACLNPVCL--VMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKAL 126
Query: 133 IHRDVKSGNILIDVRGAI-KLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHG 191
IHRD+K N+L+ G + K+ DFG +AC D Q G+ WMAPEV E
Sbjct: 127 IHRDLKPPNLLLVAGGTVLKICDFG-TAC-----DIQTHMTNNKGSAAWMAPEVFEG-SN 179
Query: 192 YDFKADIWSFGITALELAHGHAPFSKY--PPMKVLLMTLQNAPPGLDYERDRKFSKSFKQ 249
Y K D++S+GI E+ PF + P +++ P L + K +
Sbjct: 180 YSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLI----KNLPKPIES 235
Query: 250 MIASCLVKDPSKRPSAKKLLK 270
++ C KDPS+RPS ++++K
Sbjct: 236 LMTRCWSKDPSQRPSMEEIVK 256
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 117/271 (43%), Gaps = 16/271 (5%)
Query: 1 MDKKKYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREA 60
+ K + I E L ++GQG V +N V I + +EA
Sbjct: 8 LAKDAWEIPRESLRLEVKLGQGCFGEVWMGT---WNGTTRVAIKTLKPGTMSPEAFLQEA 64
Query: 61 QTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREV 120
Q M + H +++ + + VS+ +++V +MS GS L LK + + ++
Sbjct: 65 QVMKKLRHEKLVQLY-AVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQI 123
Query: 121 LKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPC- 179
G+ Y+ ++HRD+ + NIL+ K+ DFG++ + D+ R F P
Sbjct: 124 ASGMAYVERMNYVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF---PIK 180
Query: 180 WMAPEVMEQLHG-YDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLDY 237
W APE L+G + K+D+WSFGI EL G P+ P V L G
Sbjct: 181 WTAPEA--ALYGRFTIKSDVWSFGILLTELTTKGRVPY----PGMVNREVLDQVERGYRM 234
Query: 238 ERDRKFSKSFKQMIASCLVKDPSKRPSAKKL 268
+ +S ++ C KDP +RP+ + L
Sbjct: 235 PCPPECPESLHDLMCQCWRKDPEERPTFEYL 265
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 106/221 (47%), Gaps = 10/221 (4%)
Query: 12 HYTLYEEVGQGVSASVHRALCIPF----NEIVAVKILDFERDNSDLSNISREAQTMILVD 67
H +++G+G SV P E+VAVK L + L + RE + + +
Sbjct: 11 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH-LRDFEREIEILKSLQ 69
Query: 68 HPNVLKSH--CSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLD 125
H N++K C NL ++M ++ GS L+ + + + + + ++ KG++
Sbjct: 70 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICKGME 128
Query: 126 YLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEV 185
YL +IHRD+ + NIL++ +K+GDFG++ L + +++ W APE
Sbjct: 129 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPES 188
Query: 186 MEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLM 226
+ + + +D+WSFG+ EL + SK PP + + M
Sbjct: 189 LTE-SKFSVASDVWSFGVVLYEL-FTYIEKSKSPPAEFMRM 227
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 106/218 (48%), Gaps = 16/218 (7%)
Query: 12 HYTLYEEVGQGVSASVHRALCIPFNEI---VAVKILDFER--DNSDLSNISREAQTMILV 66
H +E + + S R + + E A+KILD ++ + + E + + V
Sbjct: 40 HLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 99
Query: 67 DHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDY 126
+ P ++K SF + NL++VM ++ GG L+ F E +++ +Y
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEY 157
Query: 127 LHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN-TFVGTPCWMAPEV 185
LH I+RD+K N+LID +G I++ DFG + R + R T GTP ++APE+
Sbjct: 158 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTWTLCGTPEYLAPEI 210
Query: 186 MEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKV 223
+ GY+ D W+ G+ E+A G+ PF P+++
Sbjct: 211 ILS-KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 247
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 125/275 (45%), Gaps = 35/275 (12%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKIL---DFERDNSDLSNISREAQTMILVD 67
E + + +G+G +V+ A I+A+K+L E+ + + RE + +
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLR 66
Query: 68 HPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYL 127
HPN+L+ + F +++++ + G+ L+ F+E AT + E+ L Y
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYC 124
Query: 128 HHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVME 187
H IHRD+K N+L+ G +K+ DFG S S R GT ++ PE++E
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RRTXLCGTLDYLPPEMIE 179
Query: 188 -QLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKS 246
++H D K D+WS G+ E G PF T Q Y+R + +
Sbjct: 180 GRMH--DEKVDLWSLGVLCYEFLVGKPPFEA--------NTYQET-----YKRISRVEFT 224
Query: 247 F--------KQMIASCLVKDPSKRPSAKKLLKHSF 273
F + +I+ L +PS+RP +++L+H +
Sbjct: 225 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 117/256 (45%), Gaps = 10/256 (3%)
Query: 14 TLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPNVLK 73
T+ ++G G V+ + ++ VAVK L + D ++ +EA M + HPN+++
Sbjct: 262 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL--KEDTMEVEEFLKEAAVMKEIKHPNLVQ 319
Query: 74 SHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHI 133
+ +++ FM+ G+ L L+ VV+ + ++ ++YL I
Sbjct: 320 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFI 379
Query: 134 HRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYD 193
HR++ + N L+ +K+ DFG+S + +GD W APE + + +
Sbjct: 380 HRNLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAHAGAKFPIKWTAPESL-AYNKFS 436
Query: 194 FKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIA 252
K+D+W+FG+ E+A +G +P+ P L + ER + +++
Sbjct: 437 IKSDVWAFGVLLWEIATYGMSPY----PGIDLSQVYELLEKDYRMERPEGCPEKVYELMR 492
Query: 253 SCLVKDPSKRPSAKKL 268
+C +PS RPS ++
Sbjct: 493 ACWQWNPSDRPSFAEI 508
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 105/218 (48%), Gaps = 16/218 (7%)
Query: 12 HYTLYEEVGQGVSASVHRALCIPFNEI---VAVKILDFER--DNSDLSNISREAQTMILV 66
H +E + + S R + + E A+KILD ++ + + E + + V
Sbjct: 39 HLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 67 DHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDY 126
+ P ++K SF + NL++VM ++ GG L+ F E +++ +Y
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEY 156
Query: 127 LHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN-TFVGTPCWMAPEV 185
LH I+RD+K N+LID +G IK+ DFG + R + R GTP ++APE+
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIKVADFGFAK-------RVKGRTWXLCGTPEYLAPEI 209
Query: 186 MEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKV 223
+ GY+ D W+ G+ E+A G+ PF P+++
Sbjct: 210 ILS-KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 117/271 (43%), Gaps = 16/271 (5%)
Query: 1 MDKKKYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREA 60
+ K + I E L ++GQG V +N V I + +EA
Sbjct: 8 LAKDAWEIPRESLRLEVKLGQGCFGEVWMGT---WNGTTRVAIKTLKPGTMSPEAFLQEA 64
Query: 61 QTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREV 120
Q M + H +++ + + VS+ +++V +MS G L LK + + ++
Sbjct: 65 QVMKKLRHEKLVQLY-AVVSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQI 123
Query: 121 LKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPC- 179
G+ Y+ ++HRD+++ NIL+ K+ DFG++ + D+ R F P
Sbjct: 124 ASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF---PIK 180
Query: 180 WMAPEVMEQLHG-YDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLDY 237
W APE L+G + K+D+WSFGI EL G P+ P V L G
Sbjct: 181 WTAPEA--ALYGRFTIKSDVWSFGILLTELTTKGRVPY----PGMVNREVLDQVERGYRM 234
Query: 238 ERDRKFSKSFKQMIASCLVKDPSKRPSAKKL 268
+ +S ++ C KDP +RP+ + L
Sbjct: 235 PCPPECPESLHDLMCQCWRKDPEERPTFEYL 265
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 106/221 (47%), Gaps = 10/221 (4%)
Query: 12 HYTLYEEVGQGVSASVHRALCIPF----NEIVAVKILDFERDNSDLSNISREAQTMILVD 67
H +++G+G SV P E+VAVK L + L + RE + + +
Sbjct: 12 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE-EHLRDFEREIEILKSLQ 70
Query: 68 HPNVLKSH--CSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLD 125
H N++K C NL ++M ++ GS L+ + + + + + ++ KG++
Sbjct: 71 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICKGME 129
Query: 126 YLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEV 185
YL +IHR++ + NIL++ +K+GDFG++ L + +++ W APE
Sbjct: 130 YLGTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPES 189
Query: 186 MEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLM 226
+ + + +D+WSFG+ EL + SK PP + + M
Sbjct: 190 LTE-SKFSVASDVWSFGVVLYEL-FTYIEKSKSPPAEFMRM 228
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 118/271 (43%), Gaps = 16/271 (5%)
Query: 1 MDKKKYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREA 60
+ K + I E L ++GQG V +N V I + +EA
Sbjct: 1 LAKDAWEIPRESLRLEVKLGQGCFGEVWMGT---WNGTTRVAIKTLKPGTMSPEAFLQEA 57
Query: 61 QTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREV 120
Q M + H +++ + + VS+ +++V +MS GS L LK + + ++
Sbjct: 58 QVMKKLRHEKLVQLY-AVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQI 116
Query: 121 LKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPC- 179
G+ Y+ ++HRD+++ NIL+ K+ DFG++ + D+ R F P
Sbjct: 117 ASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF---PIK 173
Query: 180 WMAPEVMEQLHG-YDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLDY 237
W APE L+G + K+D+WSFGI EL G P+ P V L G
Sbjct: 174 WTAPEA--ALYGRFTIKSDVWSFGILLTELTTKGRVPY----PGMVNREVLDQVERGYRM 227
Query: 238 ERDRKFSKSFKQMIASCLVKDPSKRPSAKKL 268
+ +S ++ C K+P +RP+ + L
Sbjct: 228 PCPPECPESLHDLMCQCWRKEPEERPTFEYL 258
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 106/218 (48%), Gaps = 16/218 (7%)
Query: 12 HYTLYEEVGQGVSASVHRALCIPFNEI---VAVKILDFER--DNSDLSNISREAQTMILV 66
H +E + + S R + + E A+KILD ++ + + E + + V
Sbjct: 25 HLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 84
Query: 67 DHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDY 126
+ P ++K SF + NL++VM ++ GG L+ F E +++ +Y
Sbjct: 85 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEY 142
Query: 127 LHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN-TFVGTPCWMAPEV 185
LH I+RD+K N+LID +G I++ DFG + R + R T GTP ++APE+
Sbjct: 143 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTWTLCGTPEYLAPEI 195
Query: 186 MEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKV 223
+ GY+ D W+ G+ E+A G+ PF P+++
Sbjct: 196 ILS-KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 232
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 125/275 (45%), Gaps = 35/275 (12%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKIL---DFERDNSDLSNISREAQTMILVD 67
E + + +G+G +V+ A I+A+K+L E+ + + RE + +
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLR 66
Query: 68 HPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYL 127
HPN+L+ + F +++++ + G+ L+ F+E AT + E+ L Y
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYC 124
Query: 128 HHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVME 187
H IHRD+K N+L+ G +K+ DFG S S R GT ++ PE++E
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RRXXLCGTLDYLPPEMIE 179
Query: 188 -QLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKS 246
++H D K D+WS G+ E G PF T Q Y+R + +
Sbjct: 180 GRMH--DEKVDLWSLGVLCYEFLVGKPPFEA--------NTYQET-----YKRISRVEFT 224
Query: 247 F--------KQMIASCLVKDPSKRPSAKKLLKHSF 273
F + +I+ L +PS+RP +++L+H +
Sbjct: 225 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 119/271 (43%), Gaps = 16/271 (5%)
Query: 1 MDKKKYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREA 60
+ K + I E L ++GQG V +N V I + +EA
Sbjct: 174 LAKDAWEIPRESLRLEVKLGQGCFGEVWMGT---WNGTTRVAIKTLKPGTMSPEAFLQEA 230
Query: 61 QTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREV 120
Q M + H +++ + + VS+ +++V +MS GS L LK + + ++
Sbjct: 231 QVMKKLRHEKLVQLY-AVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQI 289
Query: 121 LKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPC- 179
G+ Y+ ++HRD+++ NIL+ K+ DFG++ + D+ R F P
Sbjct: 290 ASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF---PIK 346
Query: 180 WMAPEVMEQLHG-YDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLDY 237
W APE L+G + K+D+WSFGI EL G P YP M V L G
Sbjct: 347 WTAPEAA--LYGRFTIKSDVWSFGILLTELTTKGRVP---YPGM-VNREVLDQVERGYRM 400
Query: 238 ERDRKFSKSFKQMIASCLVKDPSKRPSAKKL 268
+ +S ++ C K+P +RP+ + L
Sbjct: 401 PCPPECPESLHDLMCQCWRKEPEERPTFEYL 431
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 119/252 (47%), Gaps = 27/252 (10%)
Query: 36 NEIVAVKIL--DFERDNSDLSNISREAQTMILVDHPNVLKS-HCSFVSDHNLWVVMPFMS 92
+E+ AVKIL D + D+ E + + L P L H F + L+ VM +++
Sbjct: 366 DELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVN 425
Query: 93 GGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKL 152
GG ++ ++ F+E E+ GL +L G I+RD+K N+++D G IK+
Sbjct: 426 GGDLMYHIQQV--GRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKI 483
Query: 153 GDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGH 212
DFG+ C + D + F GTP ++APE++ Y D W+FG+ E+ G
Sbjct: 484 ADFGM--CKENIWDGVTTK-XFCGTPDYIAPEII-AYQPYGKSVDWWAFGVLLYEMLAGQ 539
Query: 213 APFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSF-KQMIASC---LVKDPSKR----PS 264
APF ++ + E + + KS K+ +A C + K P KR P
Sbjct: 540 APFEGEDEDELFQSIM---------EHNVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPE 590
Query: 265 AKKLLK-HSFFK 275
++ +K H+FF+
Sbjct: 591 GERDIKEHAFFR 602
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 118/271 (43%), Gaps = 16/271 (5%)
Query: 1 MDKKKYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREA 60
+ K + I E L ++GQG V +N V I + +EA
Sbjct: 257 LAKDAWEIPRESLRLEVKLGQGCFGEVWMGT---WNGTTRVAIKTLKPGTMSPEAFLQEA 313
Query: 61 QTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREV 120
Q M + H +++ + + VS+ +++V +MS GS L LK + + ++
Sbjct: 314 QVMKKLRHEKLVQLY-AVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQI 372
Query: 121 LKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPC- 179
G+ Y+ ++HRD+++ NIL+ K+ DFG++ + D+ R F P
Sbjct: 373 ASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF---PIK 429
Query: 180 WMAPEVMEQLHG-YDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLDY 237
W APE L+G + K+D+WSFGI EL G P+ P V L G
Sbjct: 430 WTAPEAA--LYGRFTIKSDVWSFGILLTELTTKGRVPY----PGMVNREVLDQVERGYRM 483
Query: 238 ERDRKFSKSFKQMIASCLVKDPSKRPSAKKL 268
+ +S ++ C K+P +RP+ + L
Sbjct: 484 PCPPECPESLHDLMCQCWRKEPEERPTFEYL 514
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 115/238 (48%), Gaps = 20/238 (8%)
Query: 56 ISREAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIAT 115
I RE + V HPN++ H + + ++ +++ +SGG L A + E +
Sbjct: 62 IEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFL--AQKESLSEEEATS 119
Query: 116 ILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGA----IKLGDFGVSACLFDSGDRQRMR 171
++++L G++YLH H D+K NI++ + IKL DFG++ + D + +
Sbjct: 120 FIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE---FK 176
Query: 172 NTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNA 231
N F GTP ++APE++ +AD+WS G+ L G +PF + TL N
Sbjct: 177 NIF-GTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE----TLANI 230
Query: 232 PPGLDYERDRKF----SKSFKQMIASCLVKDPSKRPSAKKLLKHSFFKQARSNEYIAR 285
+ Y+ D +F S+ K I LVK+ KR + ++ L+H + + + + R
Sbjct: 231 -TAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDTQQAMVR 287
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 125/275 (45%), Gaps = 35/275 (12%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKIL---DFERDNSDLSNISREAQTMILVD 67
E + + +G+G +V+ A I+A+K+L E+ + + RE + +
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLR 66
Query: 68 HPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYL 127
HPN+L+ + F +++++ + G+ L+ F+E AT + E+ L Y
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYC 124
Query: 128 HHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVME 187
H IHRD+K N+L+ G +K+ DFG S S R GT ++ PE++E
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RRAALCGTLDYLPPEMIE 179
Query: 188 -QLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKS 246
++H D K D+WS G+ E G PF T Q Y+R + +
Sbjct: 180 GRMH--DEKVDLWSLGVLCYEFLVGKPPFEA--------NTYQET-----YKRISRVEFT 224
Query: 247 F--------KQMIASCLVKDPSKRPSAKKLLKHSF 273
F + +I+ L +PS+RP +++L+H +
Sbjct: 225 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 119/271 (43%), Gaps = 16/271 (5%)
Query: 1 MDKKKYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREA 60
+ K + I E L ++GQG V +N V I + +EA
Sbjct: 174 LAKDAWEIPRESLRLEVKLGQGCFGEVWMGT---WNGTTRVAIKTLKPGTMSPEAFLQEA 230
Query: 61 QTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREV 120
Q M + H +++ + + VS+ +++V +MS GS L LK + + ++
Sbjct: 231 QVMKKLRHEKLVQLY-AVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQI 289
Query: 121 LKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPC- 179
G+ Y+ ++HRD+++ NIL+ K+ DFG++ + D+ R F P
Sbjct: 290 ASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF---PIK 346
Query: 180 WMAPEVMEQLHG-YDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLDY 237
W APE L+G + K+D+WSFGI EL G P YP M V L G
Sbjct: 347 WTAPEAA--LYGRFTIKSDVWSFGILLTELTTKGRVP---YPGM-VNREVLDQVERGYRM 400
Query: 238 ERDRKFSKSFKQMIASCLVKDPSKRPSAKKL 268
+ +S ++ C K+P +RP+ + L
Sbjct: 401 PCPPECPESLHDLMCQCWRKEPEERPTFEYL 431
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 98/213 (46%), Gaps = 17/213 (7%)
Query: 68 HPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYL 127
HP + SF + L VM + +GG L + F E E++ LDYL
Sbjct: 210 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHL--SRERVFSEDRARFYGAEIVSALDYL 267
Query: 128 HHHGHI-HRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVM 186
H ++ +RD+K N+++D G IK+ DFG+ C D M+ TF GTP ++APEV+
Sbjct: 268 HSEKNVVYRDLKLENLMLDKDGHIKITDFGL--CKEGIKDGATMK-TFCGTPEYLAPEVL 324
Query: 187 EQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKS 246
E + Y D W G+ E+ G PF K+ + L + R
Sbjct: 325 ED-NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME-----EIRFPRTLGPE 378
Query: 247 FKQMIASCLVKDPSKR-----PSAKKLLKHSFF 274
K +++ L KDP +R AK++++H FF
Sbjct: 379 AKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 411
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 98/213 (46%), Gaps = 17/213 (7%)
Query: 68 HPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYL 127
HP + SF + L VM + +GG L + F E E++ LDYL
Sbjct: 207 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHL--SRERVFSEDRARFYGAEIVSALDYL 264
Query: 128 HHHGHI-HRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVM 186
H ++ +RD+K N+++D G IK+ DFG+ C D M+ TF GTP ++APEV+
Sbjct: 265 HSEKNVVYRDLKLENLMLDKDGHIKITDFGL--CKEGIKDGATMK-TFCGTPEYLAPEVL 321
Query: 187 EQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKS 246
E + Y D W G+ E+ G PF K+ + L + R
Sbjct: 322 ED-NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME-----EIRFPRTLGPE 375
Query: 247 FKQMIASCLVKDPSKR-----PSAKKLLKHSFF 274
K +++ L KDP +R AK++++H FF
Sbjct: 376 AKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 408
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 105/226 (46%), Gaps = 15/226 (6%)
Query: 66 VDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLD 125
V HP ++ H SF + L+ V+ +++GG + L+ F E E+ L
Sbjct: 96 VKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRE--RCFLEPRARFYAAEIASALG 153
Query: 126 YLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEV 185
YLH ++RD+K NIL+D +G I L DFG+ ++ + +TF GTP ++APEV
Sbjct: 154 YLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCK---ENIEHNSTTSTFCGTPEYLAPEV 210
Query: 186 MEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSK 245
+ + YD D W G E+ +G PF + + + N P L +
Sbjct: 211 LHK-QPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE-MYDNILNKPLQL----KPNITN 264
Query: 246 SFKQMIASCLVKDPSKRPSAK----KLLKHSFFKQARSNEYIARTL 287
S + ++ L KD +KR AK ++ H FF ++ I + +
Sbjct: 265 SARHLLEGLLQKDRTKRLGAKDDFMEIKSHVFFSLINWDDLINKKI 310
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 132/302 (43%), Gaps = 39/302 (12%)
Query: 16 YEEV---GQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPNVL 72
+EE+ GQG V +A + A+K LS I E + ++H V+
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIK--KIRHTEEKLSTILSEVMLLASLNHQYVV 65
Query: 73 KSHCSFVSDHNLWVVMPFMSGGSCLHIL------KAAYPDGFEEVV------IATILREV 120
+ + +++ N M + S L I + Y E + + R++
Sbjct: 66 RYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQI 125
Query: 121 LKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN-------- 172
L+ L Y+H G IHRD+K NI ID +K+GDFG++ + S D ++ +
Sbjct: 126 LEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSD 185
Query: 173 ---TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ 229
+ +GT ++A EV++ Y+ K D++S GI E+ + PFS +L L+
Sbjct: 186 NLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILKKLR 242
Query: 230 NA----PPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSFFKQARSNEYIAR 285
+ PP D D K K K++I + DP+KRP A+ LL + +E I
Sbjct: 243 SVSIEFPPDFD---DNKM-KVEKKIIRLLIDHDPNKRPGARTLLNSGWLPVKHQDEVIKE 298
Query: 286 TL 287
L
Sbjct: 299 AL 300
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 119/252 (47%), Gaps = 27/252 (10%)
Query: 36 NEIVAVKIL--DFERDNSDLSNISREAQTMILVDHPNVLKS-HCSFVSDHNLWVVMPFMS 92
+E+ AVKIL D + D+ E + + L P L H F + L+ VM +++
Sbjct: 45 DELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVN 104
Query: 93 GGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKL 152
GG ++ ++ F+E E+ GL +L G I+RD+K N+++D G IK+
Sbjct: 105 GGDLMYHIQQV--GRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKI 162
Query: 153 GDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGH 212
DFG+ C + D + F GTP ++APE++ Y D W+FG+ E+ G
Sbjct: 163 ADFGM--CKENIWDGVTTK-XFCGTPDYIAPEII-AYQPYGKSVDWWAFGVLLYEMLAGQ 218
Query: 213 APFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSF-KQMIASC---LVKDPSKR----PS 264
APF ++ + E + + KS K+ +A C + K P KR P
Sbjct: 219 APFEGEDEDELFQSIM---------EHNVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPE 269
Query: 265 AKKLLK-HSFFK 275
++ +K H+FF+
Sbjct: 270 GERDIKEHAFFR 281
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 109/218 (50%), Gaps = 21/218 (9%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERD---NSDLSNISREAQTMILVD 67
+ + + + +G+G + V ++ A+KI++ + D ++S E ++ D
Sbjct: 61 DDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMN-KWDMLKRGEVSCFREERDVLVNGD 119
Query: 68 HPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILR----EVLKG 123
+ + H +F ++ L++VM + GG L +L F E + A + R E++
Sbjct: 120 RRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSK-----FGERIPAEMARFYLAEIVMA 174
Query: 124 LDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAP 183
+D +H G++HRD+K NIL+D G I+L DFG +CL D VGTP +++P
Sbjct: 175 IDSVHRLGYVHRDIKPDNILLDRCGHIRLADFG--SCLKLRADGTVRSLVAVGTPDYLSP 232
Query: 184 EVMEQLHGYDF------KADIWSFGITALELAHGHAPF 215
E+++ + G + D W+ G+ A E+ +G PF
Sbjct: 233 EILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPF 270
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 106/218 (48%), Gaps = 16/218 (7%)
Query: 12 HYTLYEEVGQGVSASVHRALCIPFNEI---VAVKILDFER--DNSDLSNISREAQTMILV 66
H +E + + S R + + E A+KILD ++ ++ + E + + V
Sbjct: 39 HLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAV 98
Query: 67 DHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDY 126
+ P ++K SF + NL++VM + GG L+ F E +++ +Y
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEY 156
Query: 127 LHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN-TFVGTPCWMAPEV 185
LH I+RD+K N++ID +G IK+ DFG++ R + R GTP ++APE+
Sbjct: 157 LHSLDLIYRDLKPENLMIDQQGYIKVTDFGLAK-------RVKGRTWXLCGTPEYLAPEI 209
Query: 186 MEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKV 223
+ GY+ D W+ G+ E+A G+ PF P+++
Sbjct: 210 ILS-KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 105/218 (48%), Gaps = 16/218 (7%)
Query: 12 HYTLYEEVGQGVSASVHRALCIPFNEI---VAVKILDFER--DNSDLSNISREAQTMILV 66
H +E + + S R + + E A+KILD ++ + + E + + V
Sbjct: 39 HLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 67 DHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDY 126
+ P ++K SF + NL++VM ++ GG L+ F E +++ +Y
Sbjct: 99 NFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEY 156
Query: 127 LHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN-TFVGTPCWMAPEV 185
LH I+RD+K N+LID +G I++ DFG + R + R GTP ++APE+
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEI 209
Query: 186 MEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKV 223
+ GY+ D W+ G+ E+A G+ PF P+++
Sbjct: 210 ILS-KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 105/218 (48%), Gaps = 16/218 (7%)
Query: 12 HYTLYEEVGQGVSASVHRALCIPFNEI---VAVKILDFER--DNSDLSNISREAQTMILV 66
H +E + + S R + + E A+KILD ++ + + E + + V
Sbjct: 39 HLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 67 DHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDY 126
+ P ++K SF + NL++VM ++ GG L+ F E +++ +Y
Sbjct: 99 NFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEY 156
Query: 127 LHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN-TFVGTPCWMAPEV 185
LH I+RD+K N+LID +G I++ DFG + R + R GTP ++APE+
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEI 209
Query: 186 MEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKV 223
+ GY+ D W+ G+ E+A G+ PF P+++
Sbjct: 210 ILS-KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 98/189 (51%), Gaps = 17/189 (8%)
Query: 40 AVKILDFER--DNSDLSNISREAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCL 97
A+KILD ++ + + E + + V+ P ++K SF + NL++VM +++GG
Sbjct: 91 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 150
Query: 98 HILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGV 157
L+ F E +++ +YLH I+RD+K N+LID +G I++ DFG
Sbjct: 151 SHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 208
Query: 158 SACLFDSGDRQRMRN---TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAP 214
+ +R++ T GTP ++APE++ GY+ D W+ G+ E+A G+ P
Sbjct: 209 A---------KRVKGATWTLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPP 258
Query: 215 FSKYPPMKV 223
F P+++
Sbjct: 259 FFADQPIQI 267
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 132/289 (45%), Gaps = 29/289 (10%)
Query: 5 KYPIGAEHYTLYEEVGQGVSASVHRALCIPFNE-------IVAVKILDFERDNSDLSNIS 57
++ + + L + +G+G V A I ++ VAVK+L + DLS++
Sbjct: 22 RWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLI 81
Query: 58 REAQTMILV-DHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVV---- 112
E + M ++ H N++ + D L+V++ + S G+ L+A P G E
Sbjct: 82 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSH 141
Query: 113 ----------IATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLF 162
+ + +V +G++YL IHRD+ + N+L+ +K+ DFG++ +
Sbjct: 142 NPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIH 201
Query: 163 DSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALEL-AHGHAPFSKYPPM 221
++ N + WMAPE + Y ++D+WSFG+ E+ G +P+ P+
Sbjct: 202 HIDXXKKTTNGRLPVK-WMAPEALFD-RIYTHQSDVWSFGVLLWEIFTLGGSPYPGV-PV 258
Query: 222 KVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLK 270
+ L L+ G ++ + M+ C PS+RP+ K+L++
Sbjct: 259 EELFKLLKE---GHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 304
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 119/271 (43%), Gaps = 16/271 (5%)
Query: 1 MDKKKYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREA 60
+ K + I E L ++GQG V +N V I + +EA
Sbjct: 174 LAKDAWEIPRESLRLEVKLGQGCFGEVWMGT---WNGTTRVAIKTLKPGTMSPEAFLQEA 230
Query: 61 QTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREV 120
Q M + H +++ + + VS+ +++V +MS GS L LK + + ++
Sbjct: 231 QVMKKLRHEKLVQLY-AVVSEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQI 289
Query: 121 LKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPC- 179
G+ Y+ ++HRD+++ NIL+ K+ DFG++ + D+ R F P
Sbjct: 290 ASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF---PIK 346
Query: 180 WMAPEVMEQLHG-YDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLDY 237
W APE L+G + K+D+WSFGI EL G P YP M V L G
Sbjct: 347 WTAPEAA--LYGRFTIKSDVWSFGILLTELTTKGRVP---YPGM-VNREVLDQVERGYRM 400
Query: 238 ERDRKFSKSFKQMIASCLVKDPSKRPSAKKL 268
+ +S ++ C K+P +RP+ + L
Sbjct: 401 PCPPECPESLHDLMCQCWRKEPEERPTFEYL 431
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 105/218 (48%), Gaps = 16/218 (7%)
Query: 12 HYTLYEEVGQGVSASVHRALCIPFNEI---VAVKILDFER--DNSDLSNISREAQTMILV 66
H +E + + S R + + E A+KILD ++ + + E + + V
Sbjct: 39 HLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 67 DHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDY 126
+ P ++K SF + NL++VM ++ GG L+ F E +++ +Y
Sbjct: 99 NFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEY 156
Query: 127 LHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN-TFVGTPCWMAPEV 185
LH I+RD+K N+LID +G I++ DFG + R + R GTP ++APE+
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEI 209
Query: 186 MEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKV 223
+ GY+ D W+ G+ E+A G+ PF P+++
Sbjct: 210 ILS-KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 105/218 (48%), Gaps = 16/218 (7%)
Query: 12 HYTLYEEVGQGVSASVHRALCIPFNEI---VAVKILDFER--DNSDLSNISREAQTMILV 66
H +E + + S R + + E A+KILD ++ + + E + + V
Sbjct: 40 HLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 99
Query: 67 DHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDY 126
+ P ++K SF + NL++VM ++ GG L+ F E +++ +Y
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEY 157
Query: 127 LHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN-TFVGTPCWMAPEV 185
LH I+RD+K N+LID +G I++ DFG + R + R GTP ++APE+
Sbjct: 158 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEI 210
Query: 186 MEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKV 223
+ GY+ D W+ G+ E+A G+ PF P+++
Sbjct: 211 ILS-KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 247
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 106/218 (48%), Gaps = 16/218 (7%)
Query: 12 HYTLYEEVGQGVSASVHRALCIPFNEI---VAVKILDFER--DNSDLSNISREAQTMILV 66
H +E + + S R + + E A+KILD ++ + + E + + V
Sbjct: 39 HLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 67 DHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDY 126
+ P ++K SF + NL++VM +++GG L+ F E +++ +Y
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEY 156
Query: 127 LHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN-TFVGTPCWMAPEV 185
LH I+RD+K N+LID +G I++ DFG + R + R GTP ++APE+
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEI 209
Query: 186 MEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKV 223
+ GY+ D W+ G+ E+A G+ PF P+++
Sbjct: 210 ILS-KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 105/218 (48%), Gaps = 16/218 (7%)
Query: 12 HYTLYEEVGQGVSASVHRALCIPFNEI---VAVKILDFER--DNSDLSNISREAQTMILV 66
H +E + + S R + + E A+KILD ++ + + E + + V
Sbjct: 40 HLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 99
Query: 67 DHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDY 126
+ P ++K SF + NL++VM ++ GG L+ F E +++ +Y
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEY 157
Query: 127 LHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN-TFVGTPCWMAPEV 185
LH I+RD+K N+LID +G I++ DFG + R + R GTP ++APE+
Sbjct: 158 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEI 210
Query: 186 MEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKV 223
+ GY+ D W+ G+ E+A G+ PF P+++
Sbjct: 211 ILS-KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 247
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 117/248 (47%), Gaps = 22/248 (8%)
Query: 39 VAVKILDFERDNSDLSNISREAQTMILV-DHPNVLKSHCSFVSDHNLWVVMPFMSGGSCL 97
VAVK+L + DLS++ E + M ++ H N++ + D L+V++ + S G+
Sbjct: 48 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 107
Query: 98 HILKAAYPDGFEEVV--------------IATILREVLKGLDYLHHHGHIHRDVKSGNIL 143
L+A P G E + + +V +G++YL IHRD+ + N+L
Sbjct: 108 EYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL 167
Query: 144 IDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGI 203
+ +K+ DFG++ + ++ N + WMAPE + Y ++D+WSFG+
Sbjct: 168 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVK-WMAPEALFD-RIYTHQSDVWSFGV 225
Query: 204 TALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKR 262
E+ G +P+ P++ L L+ G ++ + M+ C PS+R
Sbjct: 226 LLWEIFTLGGSPYPGV-PVEELFKLLKE---GHRMDKPSNCTNELYMMMRDCWHAVPSQR 281
Query: 263 PSAKKLLK 270
P+ K+L++
Sbjct: 282 PTFKQLVE 289
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 105/218 (48%), Gaps = 16/218 (7%)
Query: 12 HYTLYEEVGQGVSASVHRALCIPFNEI---VAVKILDFER--DNSDLSNISREAQTMILV 66
H +E + + S R + + E A+KILD ++ + + E + + V
Sbjct: 40 HLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 99
Query: 67 DHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDY 126
+ P ++K SF + NL++VM ++ GG L+ F E +++ +Y
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEY 157
Query: 127 LHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN-TFVGTPCWMAPEV 185
LH I+RD+K N+LID +G I++ DFG + R + R GTP ++APE+
Sbjct: 158 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEI 210
Query: 186 MEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKV 223
+ GY+ D W+ G+ E+A G+ PF P+++
Sbjct: 211 ILS-KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 247
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 105/218 (48%), Gaps = 16/218 (7%)
Query: 12 HYTLYEEVGQGVSASVHRALCIPFNEI---VAVKILDFER--DNSDLSNISREAQTMILV 66
H +E + + S R + + E A+KILD ++ + + E + + V
Sbjct: 32 HLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 91
Query: 67 DHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDY 126
+ P ++K SF + NL++VM ++ GG L+ F E +++ +Y
Sbjct: 92 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEY 149
Query: 127 LHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN-TFVGTPCWMAPEV 185
LH I+RD+K N+LID +G I++ DFG + R + R GTP ++APE+
Sbjct: 150 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEI 202
Query: 186 MEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKV 223
+ GY+ D W+ G+ E+A G+ PF P+++
Sbjct: 203 ILS-KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 239
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 104/218 (47%), Gaps = 16/218 (7%)
Query: 12 HYTLYEEVGQGVSASVHRALCIPFNEI---VAVKILDFER--DNSDLSNISREAQTMILV 66
H +E + + S R + + E A+KILD ++ + + E + + V
Sbjct: 40 HLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 99
Query: 67 DHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDY 126
+ P ++K SF + NL++VM + GG L+ F E +++ +Y
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEY 157
Query: 127 LHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN-TFVGTPCWMAPEV 185
LH I+RD+K N++ID +G IK+ DFG + R + R GTP ++APE+
Sbjct: 158 LHSLDLIYRDLKPENLMIDQQGYIKVTDFGFA-------KRVKGRTWXLCGTPEYLAPEI 210
Query: 186 MEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKV 223
+ GY+ D W+ G+ E+A G+ PF P+++
Sbjct: 211 ILS-KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 247
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 96/187 (51%), Gaps = 13/187 (6%)
Query: 40 AVKILDFER--DNSDLSNISREAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCL 97
A+KILD ++ + + E + + V+ P ++K SF + NL++VM +++GG
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 98 HILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGV 157
L+ F E +++ +YLH I+RD+K N+LID +G I++ DFG
Sbjct: 130 SHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
Query: 158 SACLFDSGDRQRMRN-TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFS 216
+ R + R GTP ++APE++ GY+ D W+ G+ E+A G+ PF
Sbjct: 188 AK-------RVKGRTWXLAGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
Query: 217 KYPPMKV 223
P+++
Sbjct: 240 ADQPIQI 246
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 127/277 (45%), Gaps = 12/277 (4%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDF---ERDNSDLSNISREAQTMILVD 67
E Y + +++G G ++V+ A N VA+K + E++ + L RE +
Sbjct: 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEET-LKRFEREVHNSSQLS 69
Query: 68 HPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYL 127
H N++ D ++VM ++ G + +++ P + + T ++L G+ +
Sbjct: 70 HQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFT--NQILDGIKHA 127
Query: 128 HHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVME 187
H +HRD+K NILID +K+ DFG++ L ++ Q N +GT + +PE
Sbjct: 128 HDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQ--TNHVLGTVQYFSPE-QA 184
Query: 188 QLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSF 247
+ D DI+S GI E+ G PF+ + + + +Q++ P + + + +S
Sbjct: 185 KGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSL 244
Query: 248 KQMIASCLVKDPSKRPSAKKLLK---HSFFKQARSNE 281
+I KD + R + +K S + R+NE
Sbjct: 245 SNVILRATEKDKANRYKTIQEMKDDLSSVLHENRANE 281
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 105/218 (48%), Gaps = 16/218 (7%)
Query: 12 HYTLYEEVGQGVSASVHRALCIPFNEI---VAVKILDFER--DNSDLSNISREAQTMILV 66
H +E + + S R + + E A+KILD ++ + + E + + V
Sbjct: 32 HLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 91
Query: 67 DHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDY 126
+ P ++K SF + NL++VM ++ GG L+ F E +++ +Y
Sbjct: 92 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRI--GRFXEPHARFYAAQIVLTFEY 149
Query: 127 LHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN-TFVGTPCWMAPEV 185
LH I+RD+K N+LID +G I++ DFG + R + R GTP ++APE+
Sbjct: 150 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEI 202
Query: 186 MEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKV 223
+ GY+ D W+ G+ E+A G+ PF P+++
Sbjct: 203 ILS-KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 239
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 105/218 (48%), Gaps = 16/218 (7%)
Query: 12 HYTLYEEVGQGVSASVHRALCIPFNEI---VAVKILDFER--DNSDLSNISREAQTMILV 66
H +E + + S R + + E A+KILD ++ + + E + + V
Sbjct: 60 HLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 119
Query: 67 DHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDY 126
+ P ++K SF + NL++VM ++ GG L+ F E +++ +Y
Sbjct: 120 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEY 177
Query: 127 LHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN-TFVGTPCWMAPEV 185
LH I+RD+K N+LID +G I++ DFG + R + R GTP ++APE+
Sbjct: 178 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEI 230
Query: 186 MEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKV 223
+ GY+ D W+ G+ E+A G+ PF P+++
Sbjct: 231 ILS-KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 267
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 117/248 (47%), Gaps = 22/248 (8%)
Query: 39 VAVKILDFERDNSDLSNISREAQTMILV-DHPNVLKSHCSFVSDHNLWVVMPFMSGGSCL 97
VAVK+L + DLS++ E + M ++ H N++ + D L+V++ + S G+
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 122
Query: 98 HILKAAYPDGFEEVV--------------IATILREVLKGLDYLHHHGHIHRDVKSGNIL 143
L+A P G E + + +V +G++YL IHRD+ + N+L
Sbjct: 123 EYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL 182
Query: 144 IDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGI 203
+ +K+ DFG++ + ++ N + WMAPE + Y ++D+WSFG+
Sbjct: 183 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVK-WMAPEALFD-RIYTHQSDVWSFGV 240
Query: 204 TALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKR 262
E+ G +P+ P++ L L+ G ++ + M+ C PS+R
Sbjct: 241 LLWEIFTLGGSPYPGV-PVEELFKLLKE---GHRMDKPSNCTNELYMMMRDCWHAVPSQR 296
Query: 263 PSAKKLLK 270
P+ K+L++
Sbjct: 297 PTFKQLVE 304
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 123/269 (45%), Gaps = 31/269 (11%)
Query: 11 EHYTLY---EEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVD 67
+HY L + +G+G + + + N+ AVKI+ + +N +E + L +
Sbjct: 8 QHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKRME----ANTQKEITALKLCE 63
Query: 68 -HPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDY 126
HPN++K H F + ++VM ++GG +K F E + I+R+++ + +
Sbjct: 64 GHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKK--KHFSETEASYIMRKLVSAVSH 121
Query: 127 LHHHGHIHRDVKSGNILIDVRG---AIKLGDFGVSACLFDSGDRQRMRNTFVGTPC---- 179
+H G +HRD+K N+L IK+ DFG + D Q ++ TPC
Sbjct: 122 MHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFAR--LKPPDNQPLK-----TPCFTLH 174
Query: 180 WMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKV------LLMTLQNAPP 233
+ APE++ Q +GYD D+WS G+ + G PF + ++ ++
Sbjct: 175 YAAPELLNQ-NGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDF 233
Query: 234 GLDYERDRKFSKSFKQMIASCLVKDPSKR 262
+ E + S+ K +I L DP+KR
Sbjct: 234 SFEGEAWKNVSQEAKDLIQGLLTVDPNKR 262
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 118/271 (43%), Gaps = 16/271 (5%)
Query: 1 MDKKKYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREA 60
+ K + I E L ++GQG V +N V I + +EA
Sbjct: 5 LAKDAWEIPRESLRLEVKLGQGCFGEVWMGT---WNGTTRVAIKTLKPGTMSPEAFLQEA 61
Query: 61 QTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREV 120
Q M + H +++ + + VS+ +++V +M+ GS L LK + + ++
Sbjct: 62 QVMKKLRHEKLVQLY-AVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQI 120
Query: 121 LKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPC- 179
G+ Y+ ++HRD+++ NIL+ K+ DFG++ + D+ R F P
Sbjct: 121 ASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF---PIK 177
Query: 180 WMAPEVMEQLHG-YDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLDY 237
W APE L+G + K+D+WSFGI EL G P+ P V L G
Sbjct: 178 WTAPEA--ALYGRFTIKSDVWSFGILLTELTTKGRVPY----PGMVNREVLDQVERGYRM 231
Query: 238 ERDRKFSKSFKQMIASCLVKDPSKRPSAKKL 268
+ +S ++ C K+P +RP+ + L
Sbjct: 232 PCPPECPESLHDLMCQCWRKEPEERPTFEYL 262
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 117/248 (47%), Gaps = 22/248 (8%)
Query: 39 VAVKILDFERDNSDLSNISREAQTMILV-DHPNVLKSHCSFVSDHNLWVVMPFMSGGSCL 97
VAVK+L + DLS++ E + M ++ H N++ + D L+V++ + S G+
Sbjct: 52 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 111
Query: 98 HILKAAYPDGFEEVV--------------IATILREVLKGLDYLHHHGHIHRDVKSGNIL 143
L+A P G E + + +V +G++YL IHRD+ + N+L
Sbjct: 112 EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL 171
Query: 144 IDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGI 203
+ +K+ DFG++ + ++ N + WMAPE + Y ++D+WSFG+
Sbjct: 172 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVK-WMAPEALFD-RIYTHQSDVWSFGV 229
Query: 204 TALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKR 262
E+ G +P+ P++ L L+ G ++ + M+ C PS+R
Sbjct: 230 LLWEIFTLGGSPYPGV-PVEELFKLLKE---GHRMDKPSNCTNELYMMMRDCWHAVPSQR 285
Query: 263 PSAKKLLK 270
P+ K+L++
Sbjct: 286 PTFKQLVE 293
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 117/248 (47%), Gaps = 22/248 (8%)
Query: 39 VAVKILDFERDNSDLSNISREAQTMILV-DHPNVLKSHCSFVSDHNLWVVMPFMSGGSCL 97
VAVK+L + DLS++ E + M ++ H N++ + D L+V++ + S G+
Sbjct: 55 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 114
Query: 98 HILKAAYPDGFEEVV--------------IATILREVLKGLDYLHHHGHIHRDVKSGNIL 143
L+A P G E + + +V +G++YL IHRD+ + N+L
Sbjct: 115 EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL 174
Query: 144 IDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGI 203
+ +K+ DFG++ + ++ N + WMAPE + Y ++D+WSFG+
Sbjct: 175 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVK-WMAPEALFD-RIYTHQSDVWSFGV 232
Query: 204 TALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKR 262
E+ G +P+ P++ L L+ G ++ + M+ C PS+R
Sbjct: 233 LLWEIFTLGGSPYPGV-PVEELFKLLKE---GHRMDKPSNCTNELYMMMRDCWHAVPSQR 288
Query: 263 PSAKKLLK 270
P+ K+L++
Sbjct: 289 PTFKQLVE 296
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 117/248 (47%), Gaps = 22/248 (8%)
Query: 39 VAVKILDFERDNSDLSNISREAQTMILV-DHPNVLKSHCSFVSDHNLWVVMPFMSGGSCL 97
VAVK+L + DLS++ E + M ++ H N++ + D L+V++ + S G+
Sbjct: 56 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 115
Query: 98 HILKAAYPDGFEEVV--------------IATILREVLKGLDYLHHHGHIHRDVKSGNIL 143
L+A P G E + + +V +G++YL IHRD+ + N+L
Sbjct: 116 EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL 175
Query: 144 IDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGI 203
+ +K+ DFG++ + ++ N + WMAPE + Y ++D+WSFG+
Sbjct: 176 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVK-WMAPEALFD-RIYTHQSDVWSFGV 233
Query: 204 TALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKR 262
E+ G +P+ P++ L L+ G ++ + M+ C PS+R
Sbjct: 234 LLWEIFTLGGSPYPGV-PVEELFKLLKE---GHRMDKPSNCTNELYMMMRDCWHAVPSQR 289
Query: 263 PSAKKLLK 270
P+ K+L++
Sbjct: 290 PTFKQLVE 297
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 96/187 (51%), Gaps = 13/187 (6%)
Query: 40 AVKILDFER--DNSDLSNISREAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCL 97
A+KILD ++ + + E + + V+ P ++K SF + NL++VM +++GG
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 98 HILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGV 157
L+ F E +++ +YLH I+RD+K N+LID +G I++ DFG
Sbjct: 130 SHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
Query: 158 SACLFDSGDRQRMRN-TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFS 216
+ R + R GTP ++APE++ GY+ D W+ G+ E+A G+ PF
Sbjct: 188 AK-------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
Query: 217 KYPPMKV 223
P+++
Sbjct: 240 ADQPIQI 246
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 117/248 (47%), Gaps = 22/248 (8%)
Query: 39 VAVKILDFERDNSDLSNISREAQTMILV-DHPNVLKSHCSFVSDHNLWVVMPFMSGGSCL 97
VAVK+L + DLS++ E + M ++ H N++ + D L+V++ + S G+
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 122
Query: 98 HILKAAYPDGFEEVV--------------IATILREVLKGLDYLHHHGHIHRDVKSGNIL 143
L+A P G E + + +V +G++YL IHRD+ + N+L
Sbjct: 123 EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL 182
Query: 144 IDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGI 203
+ +K+ DFG++ + ++ N + WMAPE + Y ++D+WSFG+
Sbjct: 183 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVK-WMAPEALFD-RIYTHQSDVWSFGV 240
Query: 204 TALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKR 262
E+ G +P+ P++ L L+ G ++ + M+ C PS+R
Sbjct: 241 LLWEIFTLGGSPYPGV-PVEELFKLLKE---GHRMDKPSNCTNELYMMMRDCWHAVPSQR 296
Query: 263 PSAKKLLK 270
P+ K+L++
Sbjct: 297 PTFKQLVE 304
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 118/271 (43%), Gaps = 16/271 (5%)
Query: 1 MDKKKYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREA 60
+ K + I E L ++GQG V +N V I + +EA
Sbjct: 5 LAKDAWEIPRESLRLEVKLGQGCFGEVWMGT---WNGTTRVAIKTLKPGTMSPEAFLQEA 61
Query: 61 QTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREV 120
Q M + H +++ + + VS+ +++V +M+ GS L LK + + ++
Sbjct: 62 QVMKKLRHEKLVQLY-AVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQI 120
Query: 121 LKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPC- 179
G+ Y+ ++HRD+++ NIL+ K+ DFG++ + D+ R F P
Sbjct: 121 ASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKF---PIK 177
Query: 180 WMAPEVMEQLHG-YDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLDY 237
W APE L+G + K+D+WSFGI EL G P+ P V L G
Sbjct: 178 WTAPEA--ALYGRFTIKSDVWSFGILLTELTTKGRVPY----PGMVNREVLDQVERGYRM 231
Query: 238 ERDRKFSKSFKQMIASCLVKDPSKRPSAKKL 268
+ +S ++ C K+P +RP+ + L
Sbjct: 232 PCPPECPESLHDLMCQCWRKEPEERPTFEYL 262
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 96/187 (51%), Gaps = 13/187 (6%)
Query: 40 AVKILDFER--DNSDLSNISREAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCL 97
A+KILD ++ + + E + + V+ P ++K SF + NL++VM +++GG
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 98 HILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGV 157
L+ F E +++ +YLH I+RD+K N+LID +G I++ DFG
Sbjct: 130 SHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
Query: 158 SACLFDSGDRQRMRN-TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFS 216
+ R + R GTP ++APE++ GY+ D W+ G+ E+A G+ PF
Sbjct: 188 AK-------RVKGRTWXLXGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
Query: 217 KYPPMKV 223
P+++
Sbjct: 240 ADQPIQI 246
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 96/187 (51%), Gaps = 13/187 (6%)
Query: 40 AVKILDFER--DNSDLSNISREAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCL 97
A+KILD ++ + + E + + V+ P ++K SF + NL++VM +++GG
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 98 HILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGV 157
L+ F E +++ +YLH I+RD+K N+LID +G I++ DFG
Sbjct: 130 SHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
Query: 158 SACLFDSGDRQRMRN-TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFS 216
+ R + R GTP ++APE++ GY+ D W+ G+ E+A G+ PF
Sbjct: 188 AK-------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
Query: 217 KYPPMKV 223
P+++
Sbjct: 240 ADEPIQI 246
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 96/187 (51%), Gaps = 13/187 (6%)
Query: 40 AVKILDFER--DNSDLSNISREAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCL 97
A+KILD ++ + + E + + V+ P ++K SF + NL++VM +++GG
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 98 HILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGV 157
L+ F E +++ +YLH I+RD+K N+LID +G I++ DFG
Sbjct: 130 SHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
Query: 158 SACLFDSGDRQRMRN-TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFS 216
+ R + R GTP ++APE++ GY+ D W+ G+ E+A G+ PF
Sbjct: 188 AK-------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
Query: 217 KYPPMKV 223
P+++
Sbjct: 240 ADQPIQI 246
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 96/187 (51%), Gaps = 13/187 (6%)
Query: 40 AVKILDFER--DNSDLSNISREAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCL 97
A+KILD ++ + + E + + V+ P ++K SF + NL++VM +++GG
Sbjct: 71 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 130
Query: 98 HILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGV 157
L+ F E +++ +YLH I+RD+K N+LID +G I++ DFG
Sbjct: 131 SHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 188
Query: 158 SACLFDSGDRQRMRN-TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFS 216
+ R + R GTP ++APE++ GY+ D W+ G+ E+A G+ PF
Sbjct: 189 AK-------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 240
Query: 217 KYPPMKV 223
P+++
Sbjct: 241 ADQPIQI 247
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 96/187 (51%), Gaps = 13/187 (6%)
Query: 40 AVKILDFER--DNSDLSNISREAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCL 97
A+KILD ++ + + E + + V+ P ++K SF + NL++VM +++GG
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 98 HILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGV 157
L+ F E +++ +YLH I+RD+K N+LID +G I++ DFG
Sbjct: 130 SHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
Query: 158 SACLFDSGDRQRMRN-TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFS 216
+ R + R GTP ++APE++ GY+ D W+ G+ E+A G+ PF
Sbjct: 188 AK-------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
Query: 217 KYPPMKV 223
P+++
Sbjct: 240 ADQPIQI 246
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 96/187 (51%), Gaps = 13/187 (6%)
Query: 40 AVKILDFER--DNSDLSNISREAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCL 97
A+KILD ++ + + E + + V+ P ++K SF + NL++VM +++GG
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 98 HILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGV 157
L+ F E +++ +YLH I+RD+K N+LID +G I++ DFG
Sbjct: 130 SHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
Query: 158 SACLFDSGDRQRMRN-TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFS 216
+ R + R GTP ++APE++ GY+ D W+ G+ E+A G+ PF
Sbjct: 188 AK-------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
Query: 217 KYPPMKV 223
P+++
Sbjct: 240 ADQPIQI 246
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 88/180 (48%), Gaps = 4/180 (2%)
Query: 39 VAVKILDFERDNSDLSNISREAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLH 98
VA+K+L + +D + REAQ M +D+P +++ L +VM M+GG LH
Sbjct: 40 VAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRL-IGVCQAEALMLVME-MAGGGPLH 97
Query: 99 ILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVS 158
+ +A +L +V G+ YL +HRD+ + N+L+ R K+ DFG+S
Sbjct: 98 KFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLS 157
Query: 159 ACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALE-LAHGHAPFSK 217
L R+ W APE + + ++D+WS+G+T E L++G P+ K
Sbjct: 158 KALGADDSYYTARSAGKWPLKWYAPECI-NFRKFSSRSDVWSYGVTMWEALSYGQKPYKK 216
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 117/248 (47%), Gaps = 22/248 (8%)
Query: 39 VAVKILDFERDNSDLSNISREAQTMILV-DHPNVLKSHCSFVSDHNLWVVMPFMSGGSCL 97
VAVK+L + DLS++ E + M ++ H N++ + D L+V++ + S G+
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 122
Query: 98 HILKAAYPDGFEEVV--------------IATILREVLKGLDYLHHHGHIHRDVKSGNIL 143
L+A P G E + + +V +G++YL IHRD+ + N+L
Sbjct: 123 EYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL 182
Query: 144 IDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGI 203
+ +K+ DFG++ + ++ N + WMAPE + Y ++D+WSFG+
Sbjct: 183 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVK-WMAPEALFD-RIYTHQSDVWSFGV 240
Query: 204 TALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKR 262
E+ G +P+ P++ L L+ G ++ + M+ C PS+R
Sbjct: 241 LLWEIFTLGGSPYPGV-PVEELFKLLKE---GHRMDKPSNCTNELYMMMRDCWHAVPSQR 296
Query: 263 PSAKKLLK 270
P+ K+L++
Sbjct: 297 PTFKQLVE 304
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 96/187 (51%), Gaps = 13/187 (6%)
Query: 40 AVKILDFER--DNSDLSNISREAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCL 97
A+KILD ++ + + E + + V+ P ++K SF + NL++VM +++GG
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 98 HILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGV 157
L+ F E +++ +YLH I+RD+K N+LID +G I++ DFG
Sbjct: 130 SHLRRI--GRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
Query: 158 SACLFDSGDRQRMRN-TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFS 216
+ R + R GTP ++APE++ GY+ D W+ G+ E+A G+ PF
Sbjct: 188 AK-------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
Query: 217 KYPPMKV 223
P+++
Sbjct: 240 ADQPIQI 246
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 105/218 (48%), Gaps = 16/218 (7%)
Query: 12 HYTLYEEVGQGVSASVHRALCIPFNEI---VAVKILDFER--DNSDLSNISREAQTMILV 66
H +E + + S R + + E A+KILD ++ + + E + + V
Sbjct: 39 HLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 67 DHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDY 126
+ P ++K SF + NL++VM ++ GG L+ F E +++ +Y
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEY 156
Query: 127 LHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN-TFVGTPCWMAPEV 185
LH I+RD+K N+LID +G I++ DFG + R + R GTP ++APE+
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEI 209
Query: 186 MEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKV 223
+ GY+ D W+ G+ E+A G+ PF P+++
Sbjct: 210 ILS-KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 105/218 (48%), Gaps = 16/218 (7%)
Query: 12 HYTLYEEVGQGVSASVHRALCIPFNEI---VAVKILDFER--DNSDLSNISREAQTMILV 66
H +E + + S R + + E A+KILD ++ + + E + + V
Sbjct: 39 HLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 67 DHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDY 126
+ P ++K SF + NL++VM ++ GG L+ F E +++ +Y
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEY 156
Query: 127 LHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN-TFVGTPCWMAPEV 185
LH I+RD+K N+LID +G I++ DFG + R + R GTP ++APE+
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEI 209
Query: 186 MEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKV 223
+ GY+ D W+ G+ E+A G+ PF P+++
Sbjct: 210 ILS-KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 105/218 (48%), Gaps = 16/218 (7%)
Query: 12 HYTLYEEVGQGVSASVHRALCIPFNEI---VAVKILDFER--DNSDLSNISREAQTMILV 66
H +E + + S R + + E A+KILD ++ + + E + + V
Sbjct: 40 HLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 99
Query: 67 DHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDY 126
+ P ++K SF + NL++VM ++ GG L+ F E +++ +Y
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEY 157
Query: 127 LHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN-TFVGTPCWMAPEV 185
LH I+RD+K N+LID +G I++ DFG + R + R GTP ++APE+
Sbjct: 158 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEI 210
Query: 186 MEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKV 223
+ GY+ D W+ G+ E+A G+ PF P+++
Sbjct: 211 ILS-KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 247
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 96/187 (51%), Gaps = 13/187 (6%)
Query: 40 AVKILDFER--DNSDLSNISREAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCL 97
A+KILD ++ + + E + + V+ P ++K SF + NL++VM +++GG
Sbjct: 65 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 124
Query: 98 HILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGV 157
L+ F E +++ +YLH I+RD+K N+LID +G I++ DFG
Sbjct: 125 SHLRRI--GRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 182
Query: 158 SACLFDSGDRQRMRN-TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFS 216
+ R + R GTP ++APE++ GY+ D W+ G+ E+A G+ PF
Sbjct: 183 AK-------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 234
Query: 217 KYPPMKV 223
P+++
Sbjct: 235 ADQPIQI 241
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 105/218 (48%), Gaps = 16/218 (7%)
Query: 12 HYTLYEEVGQGVSASVHRALCIPFNEI---VAVKILDFER--DNSDLSNISREAQTMILV 66
H +E + + S R + + E A+KILD ++ + + E + + V
Sbjct: 39 HLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 67 DHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDY 126
+ P ++K SF + NL++VM ++ GG L+ F E +++ +Y
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEY 156
Query: 127 LHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN-TFVGTPCWMAPEV 185
LH I+RD+K N+LID +G I++ DFG + R + R GTP ++APE+
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEI 209
Query: 186 MEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKV 223
+ GY+ D W+ G+ E+A G+ PF P+++
Sbjct: 210 ILS-KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 105/218 (48%), Gaps = 16/218 (7%)
Query: 12 HYTLYEEVGQGVSASVHRALCIPFNEI---VAVKILDFER--DNSDLSNISREAQTMILV 66
H +E + + S R + + E A+KILD ++ + + E + + V
Sbjct: 39 HLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 67 DHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDY 126
+ P ++K SF + NL++VM ++ GG L+ F E +++ +Y
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRI--GRFXEPHARFYAAQIVLTFEY 156
Query: 127 LHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN-TFVGTPCWMAPEV 185
LH I+RD+K N+LID +G I++ DFG + R + R GTP ++APE+
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEI 209
Query: 186 MEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKV 223
+ GY+ D W+ G+ E+A G+ PF P+++
Sbjct: 210 ILS-KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 105/218 (48%), Gaps = 16/218 (7%)
Query: 12 HYTLYEEVGQGVSASVHRALCIPFNEI---VAVKILDFER--DNSDLSNISREAQTMILV 66
H +E + + S R + + E A+KILD ++ + + E + + V
Sbjct: 39 HLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 67 DHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDY 126
+ P ++K SF + NL++VM ++ GG L+ F E +++ +Y
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRI--GRFXEPHARFYAAQIVLTFEY 156
Query: 127 LHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN-TFVGTPCWMAPEV 185
LH I+RD+K N+LID +G I++ DFG + R + R GTP ++APE+
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEI 209
Query: 186 MEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKV 223
+ GY+ D W+ G+ E+A G+ PF P+++
Sbjct: 210 ILS-KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 117/248 (47%), Gaps = 22/248 (8%)
Query: 39 VAVKILDFERDNSDLSNISREAQTMILVD-HPNVLKSHCSFVSDHNLWVVMPFMSGGSCL 97
VAVK+L + DLS++ E + M ++ H N++ + D L+V++ + S G+
Sbjct: 104 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 163
Query: 98 HILKAAYPDGFEEVV--------------IATILREVLKGLDYLHHHGHIHRDVKSGNIL 143
L+A P G E + + +V +G++YL IHRD+ + N+L
Sbjct: 164 EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL 223
Query: 144 IDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGI 203
+ +K+ DFG++ + ++ N + WMAPE + Y ++D+WSFG+
Sbjct: 224 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVK-WMAPEALFD-RIYTHQSDVWSFGV 281
Query: 204 TALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKR 262
E+ G +P+ P++ L L+ G ++ + M+ C PS+R
Sbjct: 282 LLWEIFTLGGSPYPGV-PVEELFKLLKE---GHRMDKPSNCTNELYMMMRDCWHAVPSQR 337
Query: 263 PSAKKLLK 270
P+ K+L++
Sbjct: 338 PTFKQLVE 345
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 96/187 (51%), Gaps = 13/187 (6%)
Query: 40 AVKILDFER--DNSDLSNISREAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCL 97
A+KILD ++ + + E + + V+ P ++K SF + NL++VM +++GG
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 98 HILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGV 157
L+ F E +++ +YLH I+RD+K N+LID +G I++ DFG
Sbjct: 130 SHLRRI--GRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
Query: 158 SACLFDSGDRQRMRN-TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFS 216
+ R + R GTP ++APE++ GY+ D W+ G+ E+A G+ PF
Sbjct: 188 AK-------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
Query: 217 KYPPMKV 223
P+++
Sbjct: 240 ADQPIQI 246
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 96/187 (51%), Gaps = 13/187 (6%)
Query: 40 AVKILDFER--DNSDLSNISREAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCL 97
A+KILD ++ + + E + + V+ P ++K SF + NL++VM +++GG
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 98 HILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGV 157
L+ F E +++ +YLH I+RD+K N+LID +G I++ DFG
Sbjct: 130 SHLRRI--GRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
Query: 158 SACLFDSGDRQRMRN-TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFS 216
+ R + R GTP ++APE++ GY+ D W+ G+ E+A G+ PF
Sbjct: 188 AK-------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
Query: 217 KYPPMKV 223
P+++
Sbjct: 240 ADQPIQI 246
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 105/218 (48%), Gaps = 16/218 (7%)
Query: 12 HYTLYEEVGQGVSASVHRALCIPFNEI---VAVKILDFER--DNSDLSNISREAQTMILV 66
H +E + + S R + + E A+KILD ++ + + E + + V
Sbjct: 40 HLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 99
Query: 67 DHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDY 126
+ P ++K SF + NL++VM ++ GG L+ F E +++ +Y
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRI--GRFXEPHARFYAAQIVLTFEY 157
Query: 127 LHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN-TFVGTPCWMAPEV 185
LH I+RD+K N+LID +G I++ DFG + R + R GTP ++APE+
Sbjct: 158 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEI 210
Query: 186 MEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKV 223
+ GY+ D W+ G+ E+A G+ PF P+++
Sbjct: 211 ILS-KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 247
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 109/226 (48%), Gaps = 22/226 (9%)
Query: 54 SNISREAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCL-HILKAAYPDGFEEVV 112
S++ E + + H N++ + S + ++VM +SGG IL+ + E
Sbjct: 51 SSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGV---YTEKD 107
Query: 113 IATILREVLKGLDYLHHHGHIHRDVKSGNILI---DVRGAIKLGDFGVSACLFDSGDRQR 169
+ ++++VL + YLH +G +HRD+K N+L + I + DFG+S ++
Sbjct: 108 ASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKM-----EQNG 162
Query: 170 MRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ 229
+ +T GTP ++APEV+ Q Y D WS G+ L G+ PF + K+ +
Sbjct: 163 IMSTACGTPGYVAPEVLAQ-KPYSKAVDCWSIGVITYILLCGYPPFYEETESKL----FE 217
Query: 230 NAPPGLDYERDRKF----SKSFKQMIASCLVKDPSKRPSAKKLLKH 271
G YE + F S+S K I L KDP++R + +K L H
Sbjct: 218 KIKEGY-YEFESPFWDDISESAKDFICHLLEKDPNERYTCEKALSH 262
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 96/187 (51%), Gaps = 13/187 (6%)
Query: 40 AVKILDFER--DNSDLSNISREAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCL 97
A+KILD ++ + + E + + V+ P ++K SF + NL++VM +++GG
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 98 HILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGV 157
L+ F E +++ +YLH I+RD+K N+LID +G I++ DFG
Sbjct: 130 SHLRRI--GRFAEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
Query: 158 SACLFDSGDRQRMRN-TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFS 216
+ R + R GTP ++APE++ GY+ D W+ G+ E+A G+ PF
Sbjct: 188 AK-------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
Query: 217 KYPPMKV 223
P+++
Sbjct: 240 ADQPIQI 246
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 115/266 (43%), Gaps = 16/266 (6%)
Query: 6 YPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMIL 65
+ I E L ++GQG V +N V I + +EAQ M
Sbjct: 3 WEIPRESLRLEVKLGQGCFGEVWMGT---WNGTTRVAIKTLKPGTMSPEAFLQEAQVMKK 59
Query: 66 VDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLD 125
+ H +++ + + VS+ + +V +MS GS L LK + + ++ G+
Sbjct: 60 LRHEKLVQLY-AVVSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMA 118
Query: 126 YLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPC-WMAPE 184
Y+ ++HRD+++ NIL+ K+ DFG++ + D+ R F P W APE
Sbjct: 119 YVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKF---PIKWTAPE 175
Query: 185 VMEQLHG-YDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRK 242
L+G + K+D+WSFGI EL G P+ P V L G +
Sbjct: 176 A--ALYGRFTIKSDVWSFGILLTELTTKGRVPY----PGMVNREVLDQVERGYRMPCPPE 229
Query: 243 FSKSFKQMIASCLVKDPSKRPSAKKL 268
+S ++ C K+P +RP+ + L
Sbjct: 230 CPESLHDLMCQCWRKEPEERPTFEYL 255
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 118/269 (43%), Gaps = 16/269 (5%)
Query: 3 KKKYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQT 62
K + I E L + +G G V +N V I + + EAQ
Sbjct: 1 KDVWEIPRESLQLIKRLGNGQFGEVWMGT---WNGNTKVAIKTLKPGTMSPESFLEEAQI 57
Query: 63 MILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLK 122
M + H +++ + + VS+ +++V +M+ GS L LK + + + +V
Sbjct: 58 MKKLKHDKLVQLY-AVVSEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAA 116
Query: 123 GLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPC-WM 181
G+ Y+ +IHRD++S NIL+ K+ DFG++ + D+ R F P W
Sbjct: 117 GMAYIERMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKF---PIKWT 173
Query: 182 APEVMEQLHG-YDFKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTLQNAPPGLDYER 239
APE L+G + K+D+WSFGI EL G P YP M L+ G
Sbjct: 174 APEA--ALYGRFTIKSDVWSFGILLTELVTKGRVP---YPGMNN-REVLEQVERGYRMPC 227
Query: 240 DRKFSKSFKQMIASCLVKDPSKRPSAKKL 268
+ S +++ C KDP +RP+ + L
Sbjct: 228 PQDCPISLHELMIHCWKKDPEERPTFEYL 256
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 104/218 (47%), Gaps = 16/218 (7%)
Query: 12 HYTLYEEVGQGVSASVHRALCIPFNEI---VAVKILDFER--DNSDLSNISREAQTMILV 66
H +E + + S R + + E A+KILD ++ + + E + + V
Sbjct: 39 HLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 67 DHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDY 126
+ P ++K SF + NL++VM + GG L+ F E +++ +Y
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEY 156
Query: 127 LHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN-TFVGTPCWMAPEV 185
LH I+RD+K N++ID +G IK+ DFG + R + R GTP ++APE+
Sbjct: 157 LHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-------RVKGRTWXLCGTPEYLAPEI 209
Query: 186 MEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKV 223
+ GY+ D W+ G+ E+A G+ PF P+++
Sbjct: 210 ILS-KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 96/187 (51%), Gaps = 13/187 (6%)
Query: 40 AVKILDFER--DNSDLSNISREAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCL 97
A+KILD ++ + + E + + V+ P ++K SF + NL++VM +++GG
Sbjct: 57 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 116
Query: 98 HILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGV 157
L+ F E +++ +YLH I+RD+K N+LID +G I++ DFG
Sbjct: 117 SHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDEQGYIQVTDFGF 174
Query: 158 SACLFDSGDRQRMRN-TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFS 216
+ R + R GTP ++APE++ GY+ D W+ G+ E+A G+ PF
Sbjct: 175 AK-------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 226
Query: 217 KYPPMKV 223
P+++
Sbjct: 227 ADQPIQI 233
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 106/213 (49%), Gaps = 11/213 (5%)
Query: 18 EVGQGVSASVHRALCIPFN----EIVAVKILDFERDNSDLSNISREAQTMILVDHPNVLK 73
++G+G V P N E+VAVK L + S +E + + H +++K
Sbjct: 38 DLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIK 97
Query: 74 SH--CSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHG 131
C +L +VM ++ GS L + G ++++ +++ +G+ YLH
Sbjct: 98 YKGCCEDAGAASLQLVMEYVPLGSLRDYL-PRHSIGLAQLLL--FAQQICEGMAYLHAQH 154
Query: 132 HIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHG 191
+IHRD+ + N+L+D +K+GDFG++ + + + R+R W APE +++
Sbjct: 155 YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKF 214
Query: 192 YDFKADIWSFGITALELAHGHAPFSKYPPMKVL 224
Y + +D+WSFG+T EL H S+ PP K L
Sbjct: 215 Y-YASDVWSFGVTLYELL-THCDSSQSPPTKFL 245
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 106/218 (48%), Gaps = 16/218 (7%)
Query: 12 HYTLYEEVGQGVSASVHRALCIPFNEI---VAVKILDFER--DNSDLSNISREAQTMILV 66
H +E + + S R + + E A+KILD ++ ++ + E + + V
Sbjct: 39 HLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAV 98
Query: 67 DHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDY 126
+ P ++K SF + NL++VM + GG L+ F E +++ +Y
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEY 156
Query: 127 LHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN-TFVGTPCWMAPEV 185
LH I+RD+K N++ID +G I++ DFG++ R + R GTP ++APE+
Sbjct: 157 LHSLDLIYRDLKPENLMIDQQGYIQVTDFGLAK-------RVKGRTWXLCGTPEYLAPEI 209
Query: 186 MEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKV 223
+ GY+ D W+ G+ E+A G+ PF P+++
Sbjct: 210 ILS-KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 96/187 (51%), Gaps = 13/187 (6%)
Query: 40 AVKILDFER--DNSDLSNISREAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCL 97
A+KILD ++ + + E + + V+ P ++K SF + NL++VM +++GG
Sbjct: 91 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 150
Query: 98 HILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGV 157
L+ F E +++ +YLH I+RD+K N+LID +G I++ DFG
Sbjct: 151 SHLRRI--GRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 208
Query: 158 SACLFDSGDRQRMRN-TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFS 216
+ R + R GTP ++APE++ GY+ D W+ G+ E+A G+ PF
Sbjct: 209 A-------KRVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 260
Query: 217 KYPPMKV 223
P+++
Sbjct: 261 ADQPIQI 267
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 104/218 (47%), Gaps = 16/218 (7%)
Query: 12 HYTLYEEVGQGVSASVHRALCIPFNEI---VAVKILDFER--DNSDLSNISREAQTMILV 66
H +E + + S R + + E A+KILD ++ + + E + + V
Sbjct: 39 HLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 67 DHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDY 126
+ P ++K SF + NL++VM + GG L+ F E +++ +Y
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRI--GRFXEPHARFYAAQIVLTFEY 156
Query: 127 LHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN-TFVGTPCWMAPEV 185
LH I+RD+K N++ID +G IK+ DFG + R + R GTP ++APE+
Sbjct: 157 LHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-------RVKGRTWXLCGTPEYLAPEI 209
Query: 186 MEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKV 223
+ GY+ D W+ G+ E+A G+ PF P+++
Sbjct: 210 ILS-KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 103/218 (47%), Gaps = 16/218 (7%)
Query: 12 HYTLYEEVGQGVSASVHRALCIPFNEI---VAVKILDFER--DNSDLSNISREAQTMILV 66
H +E + + S R + + E A+KILD ++ + + E + V
Sbjct: 40 HLDQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAV 99
Query: 67 DHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDY 126
+ P ++K SF + NL++V+ + GG L+ F E +++ +Y
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEY 157
Query: 127 LHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN-TFVGTPCWMAPEV 185
LH I+RD+K N+LID +G IK+ DFG + R + R GTP ++APE+
Sbjct: 158 LHSLDLIYRDLKPENLLIDQQGYIKVADFGFA-------KRVKGRTWXLCGTPEYLAPEI 210
Query: 186 MEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKV 223
+ GY+ D W+ G+ E+A G+ PF P+++
Sbjct: 211 ILS-KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 247
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 102/237 (43%), Gaps = 17/237 (7%)
Query: 39 VAVKILDFERDNSDLSNISREAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLH 98
VA+K L + EA M DHPN+++ +V +M GS
Sbjct: 80 VAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDT 139
Query: 99 ILKAAYPDG-FEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGV 157
L+ DG F + + +LR V G+ YL G++HRD+ + N+L+D K+ DFG+
Sbjct: 140 FLRTH--DGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGL 197
Query: 158 SACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALE-LAHGHAPFS 216
S L D D W APE + + +D+WSFG+ E LA+G P+
Sbjct: 198 SRVLEDDPDAAXTTTGGKIPIRWTAPEAI-AFRTFSSASDVWSFGVVMWEVLAYGERPYW 256
Query: 217 KYPPMKVLLMTLQN----APPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLL 269
V+ + AP G + + Q++ C KD ++RP +++
Sbjct: 257 NMTNRDVISSVEEGYRLPAPMGCPH--------ALHQLMLDCWHKDRAQRPRFSQIV 305
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 130/301 (43%), Gaps = 53/301 (17%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDL-SNISREAQTMILVDHP 69
+ Y E++G+G +V +A +EIVA+K + + D+ + S+ RE + + H
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61
Query: 70 NVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPD---GFEEVVIATILREVLKGLDY 126
N+++ H SD L +V F C LK + + ++ + L ++LKGL +
Sbjct: 62 NIVRLHDVLHSDKKLTLVFEF-----CDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGF 116
Query: 127 LHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVM 186
H +HRD+K N+LI+ G +KL DFG++ G R + V T + P+V+
Sbjct: 117 CHSRNVLHRDLKPQNLLINRNGELKLADFGLARAF---GIPVRCYSAEVVTLWYRPPDVL 173
Query: 187 EQLHGYDFKADIWSFGITALELAHGHAPF----------------------------SKY 218
Y D+WS G ELA+ P +K
Sbjct: 174 FGAKLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKL 233
Query: 219 P-----PMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSF 273
P PM +L N P K + + + ++ + L +P +R SA++ L+H +
Sbjct: 234 PDYKPYPMYPATTSLVNVVP--------KLNATGRDLLQNLLKCNPVQRISAEEALQHPY 285
Query: 274 F 274
F
Sbjct: 286 F 286
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 126/277 (45%), Gaps = 35/277 (12%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKIL---DFERDNSDLSNISREAQTMILVD 67
E + + +G+G +V+ A I+A+K+L E+ + + RE + +
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVE-HQLRREVEIQSHLR 70
Query: 68 HPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYL 127
HPN+L+ + F +++++ + G+ L+ F+E AT + E+ L Y
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SRFDEQRTATYITELANALSYC 128
Query: 128 HHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVME 187
H IHRD+K N+L+ G +K+ DFG S S R+T GT ++ PE++E
Sbjct: 129 HSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSS-----RRDTLCGTLDYLPPEMIE 183
Query: 188 -QLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKS 246
++H D K D+WS G+ E G PF + T Q Y R + +
Sbjct: 184 GRMH--DEKVDLWSLGVLCYEFLVGMPPFEAH--------TYQET-----YRRISRVEFT 228
Query: 247 F--------KQMIASCLVKDPSKRPSAKKLLKHSFFK 275
F + +I+ L + S+R + ++L+H + K
Sbjct: 229 FPDFVTEGARDLISRLLKHNASQRLTLAEVLEHPWIK 265
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 88/180 (48%), Gaps = 4/180 (2%)
Query: 39 VAVKILDFERDNSDLSNISREAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLH 98
VA+K+L + +D + REAQ M +D+P +++ L +VM M+GG LH
Sbjct: 366 VAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRL-IGVCQAEALMLVME-MAGGGPLH 423
Query: 99 ILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVS 158
+ +A +L +V G+ YL +HR++ + N+L+ R K+ DFG+S
Sbjct: 424 KFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLS 483
Query: 159 ACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALE-LAHGHAPFSK 217
L R+ W APE + + ++D+WS+G+T E L++G P+ K
Sbjct: 484 KALGADDSYYTARSAGKWPLKWYAPECI-NFRKFSSRSDVWSYGVTMWEALSYGQKPYKK 542
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 102/237 (43%), Gaps = 17/237 (7%)
Query: 39 VAVKILDFERDNSDLSNISREAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLH 98
VA+K L + EA M DHPN+++ +V +M GS
Sbjct: 80 VAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDT 139
Query: 99 ILKAAYPDG-FEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGV 157
L+ DG F + + +LR V G+ YL G++HRD+ + N+L+D K+ DFG+
Sbjct: 140 FLRTH--DGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGL 197
Query: 158 SACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALE-LAHGHAPFS 216
S L D D W APE + + +D+WSFG+ E LA+G P+
Sbjct: 198 SRVLEDDPDAAYTTTGGKIPIRWTAPEAI-AFRTFSSASDVWSFGVVMWEVLAYGERPYW 256
Query: 217 KYPPMKVLLMTLQN----APPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLL 269
V+ + AP G + + Q++ C KD ++RP +++
Sbjct: 257 NMTNRDVISSVEEGYRLPAPMGCPH--------ALHQLMLDCWHKDRAQRPRFSQIV 305
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 96/187 (51%), Gaps = 13/187 (6%)
Query: 40 AVKILDFER--DNSDLSNISREAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCL 97
A+KILD ++ + + E + + V+ P ++K SF + NL++VM +++GG
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 98 HILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGV 157
L+ F E +++ +YLH I+RD+K N++ID +G I++ DFG
Sbjct: 130 SHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLIIDQQGYIQVTDFGF 187
Query: 158 SACLFDSGDRQRMRN-TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFS 216
+ R + R GTP ++APE++ GY+ D W+ G+ E+A G+ PF
Sbjct: 188 AK-------RVKGRTWXLCGTPEYLAPEIIIS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
Query: 217 KYPPMKV 223
P+++
Sbjct: 240 ADQPIQI 246
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 125/277 (45%), Gaps = 35/277 (12%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKIL---DFERDNSDLSNISREAQTMILVD 67
E + + +G+G +V+ A I+A+K+L E+ + + RE + +
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVE-HQLRREVEIQSHLR 70
Query: 68 HPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYL 127
HPN+L+ + F +++++ + G+ L+ F+E AT + E+ L Y
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SRFDEQRTATYITELANALSYC 128
Query: 128 HHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVME 187
H IHRD+K N+L+ G +K+ DFG S S R T GT ++ PE++E
Sbjct: 129 HSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSS-----RRTTLCGTLDYLPPEMIE 183
Query: 188 -QLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKS 246
++H D K D+WS G+ E G PF + T Q Y R + +
Sbjct: 184 GRMH--DEKVDLWSLGVLCYEFLVGMPPFEAH--------TYQET-----YRRISRVEFT 228
Query: 247 F--------KQMIASCLVKDPSKRPSAKKLLKHSFFK 275
F + +I+ L + S+R + ++L+H + K
Sbjct: 229 FPDFVTEGARDLISRLLKHNASQRLTLAEVLEHPWIK 265
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 96/187 (51%), Gaps = 13/187 (6%)
Query: 40 AVKILDFER--DNSDLSNISREAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCL 97
A+KILD ++ + + E + + V+ P ++K SF + NL++VM +++GG
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 98 HILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGV 157
L+ F E +++ +YLH I+RD+K N+LID +G I++ DFG
Sbjct: 130 SHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
Query: 158 SACLFDSGDRQRMRN-TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFS 216
+ R + R GTP ++APE++ GY+ D W+ G+ ++A G+ PF
Sbjct: 188 AK-------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYQMAAGYPPFF 239
Query: 217 KYPPMKV 223
P+++
Sbjct: 240 ADQPIQI 246
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 107/236 (45%), Gaps = 15/236 (6%)
Query: 39 VAVKILDFERDNSDLSNISREAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLH 98
VA+K L + EA M DHPN+++ + +V +M GS
Sbjct: 47 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 106
Query: 99 ILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVS 158
L+ + F + + +LR + G+ YL G++HRD+ + NILI+ K+ DFG+S
Sbjct: 107 FLRK-HDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 165
Query: 159 ACLFDSGDRQRMRNTFVG-TPC-WMAPEVMEQLHGYDFKADIWSFGITALE-LAHGHAPF 215
L D D + T G P W +PE + + +D+WS+GI E +++G P+
Sbjct: 166 RVLED--DPEAAYTTRGGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVMSYGERPY 222
Query: 216 SKYPPMKVLLMTLQNA--PPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLL 269
+ V+ + PP +D + Q++ C KD + RP ++++
Sbjct: 223 WEMSNQDVIKAVDEGYRLPPPMD------CPAALYQLMLDCWQKDRNNRPKFEQIV 272
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 103/218 (47%), Gaps = 16/218 (7%)
Query: 12 HYTLYEEVGQGVSASVHRALCIPFNEI---VAVKILDFER--DNSDLSNISREAQTMILV 66
H +E + + S R + + E A+KILD ++ + + E + + V
Sbjct: 40 HLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 99
Query: 67 DHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDY 126
+ P + K SF + NL++VM + GG L+ F E +++ +Y
Sbjct: 100 NFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEY 157
Query: 127 LHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN-TFVGTPCWMAPEV 185
LH I+RD+K N++ID +G IK+ DFG + R + R GTP ++APE+
Sbjct: 158 LHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-------RVKGRTWXLCGTPEYLAPEI 210
Query: 186 MEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKV 223
+ GY+ D W+ G+ E+A G+ PF P+++
Sbjct: 211 ILS-KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 247
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 124/282 (43%), Gaps = 29/282 (10%)
Query: 4 KKYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSD-LSNISREAQT 62
+++ I E + E +G+G V+ ++ VA++++D ERDN D L RE
Sbjct: 26 QEWDIPFEQLEIGELIGKGRFGQVYHG---RWHGEVAIRLIDIERDNEDQLKAFKREVMA 82
Query: 63 MILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIAT-----IL 117
H NV+ + +S +L ++ G + +++ A ++V+ I
Sbjct: 83 YRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDA------KIVLDVNKTRQIA 136
Query: 118 REVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSAC--LFDSGDRQRMRNTFV 175
+E++KG+ YLH G +H+D+KS N+ D G + + DFG+ + + +G R+
Sbjct: 137 QEIVKGMGYLHAKGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRREDKLRIQN 195
Query: 176 GTPCWMAPEVMEQLH--------GYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMT 227
G C +APE++ QL + +D+++ G EL PF P ++
Sbjct: 196 GWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQM 255
Query: 228 LQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLL 269
P L K ++ C + +RP+ KL+
Sbjct: 256 GTGMKPNLS---QIGMGKEISDILLFCWAFEQEERPTFTKLM 294
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 104/238 (43%), Gaps = 15/238 (6%)
Query: 38 IVAVKILDFERDNSDLSNISREAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCL 97
VA+K L + EA M DHPNV+ + ++ FM GS
Sbjct: 63 FVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLD 122
Query: 98 HILKAAYPDG-FEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFG 156
L+ DG F + + +LR + G+ YL ++HRD+ + NIL++ K+ DFG
Sbjct: 123 SFLRQN--DGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFG 180
Query: 157 VSACLFDSGDRQRMRNTFVG-TPC-WMAPEVMEQLHGYDFKADIWSFGITALE-LAHGHA 213
+S L D + G P W APE + Q + +D+WS+GI E +++G
Sbjct: 181 LSRFLEDDTSDPTYTSALGGKIPIRWTAPEAI-QYRKFTSASDVWSYGIVMWEVMSYGER 239
Query: 214 PFSKYPPMKVLLMTLQNA--PPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLL 269
P+ V+ Q+ PP +D + Q++ C KD + RP +++
Sbjct: 240 PYWDMTNQDVINAIEQDYRLPPPMDC------PSALHQLMLDCWQKDRNHRPKFGQIV 291
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 103/218 (47%), Gaps = 16/218 (7%)
Query: 12 HYTLYEEVGQGVSASVHRALCIPFNEI---VAVKILDFER--DNSDLSNISREAQTMILV 66
H +E + + S R + + E A+KILD ++ + + E + + V
Sbjct: 40 HLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 99
Query: 67 DHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDY 126
+ P + K SF + NL++VM + GG L+ F E +++ +Y
Sbjct: 100 NFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEY 157
Query: 127 LHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN-TFVGTPCWMAPEV 185
LH I+RD+K N++ID +G IK+ DFG + R + R GTP ++APE+
Sbjct: 158 LHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-------RVKGRTWXLCGTPEYLAPEI 210
Query: 186 MEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKV 223
+ GY+ D W+ G+ E+A G+ PF P+++
Sbjct: 211 ILS-KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 247
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 115/269 (42%), Gaps = 14/269 (5%)
Query: 5 KYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMI 64
K+ I T +E+G G VH + +++ I + D EA+ M+
Sbjct: 4 KWVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIE---EAEVMM 60
Query: 65 LVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGL 124
+ HP +++ + + + +V FM G L+ E ++ L +V +G+
Sbjct: 61 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCL-DVCEGM 119
Query: 125 DYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPC-WMAP 183
YL IHRD+ + N L+ IK+ DFG++ + D Q +T P W +P
Sbjct: 120 AYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD---QYTSSTGTKFPVKWASP 176
Query: 184 EVMEQLHGYDFKADIWSFGITALE-LAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRK 242
EV Y K+D+WSFG+ E + G P+ +V +++ G + R
Sbjct: 177 EVF-SFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV----VEDISTGFRLYKPRL 231
Query: 243 FSKSFKQMIASCLVKDPSKRPSAKKLLKH 271
S Q++ C + P RP+ +LL+
Sbjct: 232 ASTHVYQIMNHCWRERPEDRPAFSRLLRQ 260
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 107/236 (45%), Gaps = 15/236 (6%)
Query: 39 VAVKILDFERDNSDLSNISREAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLH 98
VA+K L + EA M DHPN+++ + +V +M GS
Sbjct: 74 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 133
Query: 99 ILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVS 158
L+ + F + + +LR + G+ YL G++HRD+ + NILI+ K+ DFG+S
Sbjct: 134 FLRK-HDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 192
Query: 159 ACLFDSGDRQRMRNTFVG-TPC-WMAPEVMEQLHGYDFKADIWSFGITALE-LAHGHAPF 215
L D D + T G P W +PE + + +D+WS+GI E +++G P+
Sbjct: 193 RVLED--DPEAAYTTRGGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVMSYGERPY 249
Query: 216 SKYPPMKVLLMTLQNA--PPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLL 269
+ V+ + PP +D + Q++ C KD + RP ++++
Sbjct: 250 WEMSNQDVIKAVDEGYRLPPPMD------CPAALYQLMLDCWQKDRNNRPKFEQIV 299
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 107/236 (45%), Gaps = 15/236 (6%)
Query: 39 VAVKILDFERDNSDLSNISREAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLH 98
VA+K L + EA M DHPN+++ + +V +M GS
Sbjct: 64 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 123
Query: 99 ILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVS 158
L+ + F + + +LR + G+ YL G++HRD+ + NILI+ K+ DFG+S
Sbjct: 124 FLRK-HDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 182
Query: 159 ACLFDSGDRQRMRNTFVG-TPC-WMAPEVMEQLHGYDFKADIWSFGITALE-LAHGHAPF 215
L D D + T G P W +PE + + +D+WS+GI E +++G P+
Sbjct: 183 RVLED--DPEAAYTTRGGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVMSYGERPY 239
Query: 216 SKYPPMKVLLMTLQNA--PPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLL 269
+ V+ + PP +D + Q++ C KD + RP ++++
Sbjct: 240 WEMSNQDVIKAVDEGYRLPPPMD------CPAALYQLMLDCWQKDRNNRPKFEQIV 289
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 103/218 (47%), Gaps = 16/218 (7%)
Query: 12 HYTLYEEVGQGVSASVHRALCIPFNEI---VAVKILDFER--DNSDLSNISREAQTMILV 66
H +E + + S R + + E A+KILD ++ + + E + + V
Sbjct: 40 HLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 99
Query: 67 DHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDY 126
+ P + K SF + NL++VM + GG L+ F E +++ +Y
Sbjct: 100 NFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRI--GRFXEPHARFYAAQIVLTFEY 157
Query: 127 LHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN-TFVGTPCWMAPEV 185
LH I+RD+K N++ID +G IK+ DFG + R + R GTP ++APE+
Sbjct: 158 LHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-------RVKGRTWXLCGTPEYLAPEI 210
Query: 186 MEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKV 223
+ GY+ D W+ G+ E+A G+ PF P+++
Sbjct: 211 ILS-KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 247
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 123/277 (44%), Gaps = 19/277 (6%)
Query: 8 IGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVD 67
I +HY +++G+G + V + A+K + + D REA L +
Sbjct: 26 IDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRI-LCHEQQDREEAQREADMHRLFN 84
Query: 68 HPNVLK--SHC--SFVSDHNLWVVMPFMSGGSCLHILKAAYPDG--FEEVVIATILREVL 121
HPN+L+ ++C + H W+++PF G+ + ++ G E I +L +
Sbjct: 85 HPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGIC 144
Query: 122 KGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGV--SACLFDSGDRQRMR-NTFVGTP 178
+GL+ +H G+ HRD+K NIL+ G L D G AC+ G RQ + +
Sbjct: 145 RGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQR 204
Query: 179 C---WMAPEVME-QLHG-YDFKADIWSFGITALELAHGHAPFSK-YPPMKVLLMTLQNAP 232
C + APE+ Q H D + D+WS G + G P+ + + + +QN
Sbjct: 205 CTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQ- 263
Query: 233 PGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLL 269
L + + S + Q++ S + DP +RP LL
Sbjct: 264 --LSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLL 298
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 107/236 (45%), Gaps = 15/236 (6%)
Query: 39 VAVKILDFERDNSDLSNISREAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLH 98
VA+K L + EA M DHPN+++ + +V +M GS
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 99 ILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVS 158
L+ + F + + +LR + G+ YL G++HRD+ + NILI+ K+ DFG+S
Sbjct: 136 FLRK-HDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 194
Query: 159 ACLFDSGDRQRMRNTFVG-TPC-WMAPEVMEQLHGYDFKADIWSFGITALE-LAHGHAPF 215
L D D + T G P W +PE + + +D+WS+GI E +++G P+
Sbjct: 195 RVLED--DPEAAYTTRGGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVMSYGERPY 251
Query: 216 SKYPPMKVLLMTLQNA--PPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLL 269
+ V+ + PP +D + Q++ C KD + RP ++++
Sbjct: 252 WEMSNQDVIKAVDEGYRLPPPMD------CPAALYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 96/213 (45%), Gaps = 17/213 (7%)
Query: 68 HPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYL 127
HP + SF + L VM + +GG L F E E++ LDYL
Sbjct: 68 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERV--FSEDRARFYGAEIVSALDYL 125
Query: 128 HHHGHI-HRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVM 186
H ++ +RD+K N+++D G IK+ DFG+ C D M+ F GTP ++APEV+
Sbjct: 126 HSEKNVVYRDLKLENLMLDKDGHIKITDFGL--CKEGIKDGATMK-XFCGTPEYLAPEVL 182
Query: 187 EQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKS 246
E + Y D W G+ E+ G PF K+ + L + R
Sbjct: 183 ED-NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME-----EIRFPRTLGPE 236
Query: 247 FKQMIASCLVKDPSKR-----PSAKKLLKHSFF 274
K +++ L KDP +R AK++++H FF
Sbjct: 237 AKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 269
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 107/236 (45%), Gaps = 15/236 (6%)
Query: 39 VAVKILDFERDNSDLSNISREAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLH 98
VA+K L + EA M DHPN+++ + +V +M GS
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 99 ILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVS 158
L+ + F + + +LR + G+ YL G++HRD+ + NILI+ K+ DFG+S
Sbjct: 136 FLRK-HDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 194
Query: 159 ACLFDSGDRQRMRNTFVG-TPC-WMAPEVMEQLHGYDFKADIWSFGITALE-LAHGHAPF 215
L D D + T G P W +PE + + +D+WS+GI E +++G P+
Sbjct: 195 RVLED--DPEAAYTTRGGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVMSYGERPY 251
Query: 216 SKYPPMKVLLMTLQNA--PPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLL 269
+ V+ + PP +D + Q++ C KD + RP ++++
Sbjct: 252 WEMSNQDVIKAVDEGYRLPPPMD------CPAALYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 107/236 (45%), Gaps = 15/236 (6%)
Query: 39 VAVKILDFERDNSDLSNISREAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLH 98
VA+K L + EA M DHPN+++ + +V +M GS
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 99 ILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVS 158
L+ + F + + +LR + G+ YL G++HRD+ + NILI+ K+ DFG+S
Sbjct: 136 FLRK-HDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 194
Query: 159 ACLFDSGDRQRMRNTFVG-TPC-WMAPEVMEQLHGYDFKADIWSFGITALE-LAHGHAPF 215
L D D + T G P W +PE + + +D+WS+GI E +++G P+
Sbjct: 195 RVLED--DPEAAYTTRGGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVMSYGERPY 251
Query: 216 SKYPPMKVLLMTLQNA--PPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLL 269
+ V+ + PP +D + Q++ C KD + RP ++++
Sbjct: 252 WEMSNQDVIKAVDEGYRLPPPMD------CPAALYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 96/213 (45%), Gaps = 17/213 (7%)
Query: 68 HPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYL 127
HP + SF + L VM + +GG L F E E++ LDYL
Sbjct: 69 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERV--FSEDRARFYGAEIVSALDYL 126
Query: 128 HHHGHI-HRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVM 186
H ++ +RD+K N+++D G IK+ DFG+ C D M+ F GTP ++APEV+
Sbjct: 127 HSEKNVVYRDLKLENLMLDKDGHIKITDFGL--CKEGIKDGATMK-XFCGTPEYLAPEVL 183
Query: 187 EQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKS 246
E + Y D W G+ E+ G PF K+ + L + R
Sbjct: 184 ED-NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME-----EIRFPRTLGPE 237
Query: 247 FKQMIASCLVKDPSKR-----PSAKKLLKHSFF 274
K +++ L KDP +R AK++++H FF
Sbjct: 238 AKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 270
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 96/213 (45%), Gaps = 17/213 (7%)
Query: 68 HPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYL 127
HP + SF + L VM + +GG L F E E++ LDYL
Sbjct: 67 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERV--FSEDRARFYGAEIVSALDYL 124
Query: 128 HHHGHI-HRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVM 186
H ++ +RD+K N+++D G IK+ DFG+ C D M+ F GTP ++APEV+
Sbjct: 125 HSEKNVVYRDLKLENLMLDKDGHIKITDFGL--CKEGIKDGATMK-XFCGTPEYLAPEVL 181
Query: 187 EQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKS 246
E + Y D W G+ E+ G PF K+ + L + R
Sbjct: 182 ED-NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME-----EIRFPRTLGPE 235
Query: 247 FKQMIASCLVKDPSKR-----PSAKKLLKHSFF 274
K +++ L KDP +R AK++++H FF
Sbjct: 236 AKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 268
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 115/269 (42%), Gaps = 14/269 (5%)
Query: 5 KYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMI 64
K+ I T +E+G G VH + +++ I + D EA+ M+
Sbjct: 2 KWVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIE---EAEVMM 58
Query: 65 LVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGL 124
+ HP +++ + + + +V FM G L+ E ++ L +V +G+
Sbjct: 59 KLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCL-DVCEGM 117
Query: 125 DYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPC-WMAP 183
YL IHRD+ + N L+ IK+ DFG++ + D Q +T P W +P
Sbjct: 118 AYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD---QYTSSTGTKFPVKWASP 174
Query: 184 EVMEQLHGYDFKADIWSFGITALE-LAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRK 242
EV Y K+D+WSFG+ E + G P+ +V +++ G + R
Sbjct: 175 EVF-SFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV----VEDISTGFRLYKPRL 229
Query: 243 FSKSFKQMIASCLVKDPSKRPSAKKLLKH 271
S Q++ C + P RP+ +LL+
Sbjct: 230 ASTHVYQIMNHCWRERPEDRPAFSRLLRQ 258
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 107/236 (45%), Gaps = 15/236 (6%)
Query: 39 VAVKILDFERDNSDLSNISREAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLH 98
VA+K L + EA M DHPN+++ + +V +M GS
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 99 ILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVS 158
L+ + F + + +LR + G+ YL G++HRD+ + NILI+ K+ DFG+S
Sbjct: 136 FLRK-HDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 194
Query: 159 ACLFDSGDRQRMRNTFVG-TPC-WMAPEVMEQLHGYDFKADIWSFGITALE-LAHGHAPF 215
L D D + T G P W +PE + + +D+WS+GI E +++G P+
Sbjct: 195 RVLED--DPEAAYTTRGGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVMSYGERPY 251
Query: 216 SKYPPMKVLLMTLQNA--PPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLL 269
+ V+ + PP +D + Q++ C KD + RP ++++
Sbjct: 252 WEMSNQDVIKAVDEGYRLPPPMD------CPAALYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 113/252 (44%), Gaps = 10/252 (3%)
Query: 14 TLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPNVLK 73
T+ ++G G V+ + ++ VAVK L + D ++ +EA M + HPN+++
Sbjct: 35 TMKHKLGGGQYGEVYVGVWKKYSLTVAVKTL--KEDTMEVEEFLKEAAVMKEIKHPNLVQ 92
Query: 74 SHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHI 133
+ ++V +M G+ L L+ + VV+ + ++ ++YL I
Sbjct: 93 LLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKKNFI 152
Query: 134 HRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYD 193
HRD+ + N L+ +K+ DFG+S + +GD W APE + + +
Sbjct: 153 HRDLAARNCLVGENHVVKVADFGLSRLM--TGDTYTAHAGAKFPIKWTAPESL-AYNTFS 209
Query: 194 FKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIA 252
K+D+W+FG+ E+A +G +P+ P L G E+ +++
Sbjct: 210 IKSDVWAFGVLLWEIATYGMSPY----PGIDLSQVYDLLEKGYRMEQPEGCPPKVYELMR 265
Query: 253 SCLVKDPSKRPS 264
+C P+ RPS
Sbjct: 266 ACWKWSPADRPS 277
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 104/218 (47%), Gaps = 16/218 (7%)
Query: 12 HYTLYEEVGQGVSASVHRALCIPFNEI---VAVKILDFER--DNSDLSNISREAQTMILV 66
H +E + + S R + + E A+KILD ++ + + E + + V
Sbjct: 39 HLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 67 DHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDY 126
+ P ++K SF + NL++VM + GG L+ F E +++ +Y
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEY 156
Query: 127 LHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN-TFVGTPCWMAPEV 185
LH I+RD+K N++ID +G I++ DFG + R + R GTP ++APE+
Sbjct: 157 LHSLDLIYRDLKPENLMIDQQGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEI 209
Query: 186 MEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKV 223
+ GY+ D W+ G+ E+A G+ PF P+++
Sbjct: 210 ILS-KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 96/202 (47%), Gaps = 6/202 (2%)
Query: 17 EEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPNVLKSHC 76
E++G G A+V++ L VA+K + + + S RE M + H N+++ +
Sbjct: 11 EKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYD 70
Query: 77 SFVSDHNLWVVMPFMSGGSCLHI---LKAAYPDGFEEVVIATILREVLKGLDYLHHHGHI 133
+++ L +V FM ++ P G E ++ ++L+GL + H + +
Sbjct: 71 VIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKIL 130
Query: 134 HRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYD 193
HRD+K N+LI+ RG +KLGDFG++ G ++ V T + AP+V+ Y
Sbjct: 131 HRDLKPQNLLINKRGQLKLGDFGLARAF---GIPVNTFSSEVVTLWYRAPDVLMGSRTYS 187
Query: 194 FKADIWSFGITALELAHGHAPF 215
DIWS G E+ G F
Sbjct: 188 TSIDIWSCGCILAEMITGKPLF 209
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 107/213 (50%), Gaps = 11/213 (5%)
Query: 18 EVGQGVSASVHRALCIPFN----EIVAVKILDFERDNSDLSNISREAQTMILVDHPNVLK 73
++G+G V P N E+VAVK L + S +E + + H +++K
Sbjct: 21 DLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIK 80
Query: 74 SH--CSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHG 131
C + +L +VM ++ GS L + G ++++ +++ +G+ YLH
Sbjct: 81 YKGCCEDQGEKSLQLVMEYVPLGSLRDYL-PRHSIGLAQLLL--FAQQICEGMAYLHSQH 137
Query: 132 HIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHG 191
+IHR++ + N+L+D +K+GDFG++ + + + R+R W APE +++
Sbjct: 138 YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKF 197
Query: 192 YDFKADIWSFGITALELAHGHAPFSKYPPMKVL 224
Y + +D+WSFG+T EL H S+ PP K L
Sbjct: 198 Y-YASDVWSFGVTLYELL-THCDSSQSPPTKFL 228
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 124/296 (41%), Gaps = 32/296 (10%)
Query: 19 VGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNIS-REAQTMILVDHPNVLKSHCS 77
VG+G V + IVA+K D+ + I+ RE + + + H N++
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEV 92
Query: 78 FVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRDV 137
++V F+ + L L+ +P+G + V+ L +++ G+ + H H IHRD+
Sbjct: 93 CKKKKRWYLVFEFVDH-TILDDLEL-FPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDI 150
Query: 138 KSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFKAD 197
K NIL+ G +KL DFG + L G+ + + V T + APE++ Y D
Sbjct: 151 KPENILVSQSGVVKLCDFGFARTLAAPGE---VYDDEVATRWYRAPELLVGDVKYGKAVD 207
Query: 198 IWSFGITALELAHGHAPF---SKYPPMKVLLMTLQNAPP-------------GLDY---- 237
+W+ G E+ G F S + ++M L N P G+
Sbjct: 208 VWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIK 267
Query: 238 ------ERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSFFKQARSNEYIARTL 287
R K S+ + CL DP KRP +LL H FF+ E ++ L
Sbjct: 268 EREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQMDGFAERFSQEL 323
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 96/203 (47%), Gaps = 9/203 (4%)
Query: 10 AEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISR----EAQTMIL 65
A+ Y + +G+G A+V++A N+IVA+K + + I+R E + +
Sbjct: 9 AKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQE 68
Query: 66 VDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLD 125
+ HPN++ +F N+ +V FM + L ++ I + L+GL+
Sbjct: 69 LSHPNIIGLLDAFGHKSNISLVFDFME--TDLEVIIKDNSLVLTPSHIKAYMLMTLQGLE 126
Query: 126 YLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEV 185
YLH H +HRD+K N+L+D G +KL DFG++ G R V T + APE+
Sbjct: 127 YLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSF---GSPNRAYXHQVVTRWYRAPEL 183
Query: 186 MEQLHGYDFKADIWSFGITALEL 208
+ Y D+W+ G EL
Sbjct: 184 LFGARMYGVGVDMWAVGCILAEL 206
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 93/178 (52%), Gaps = 10/178 (5%)
Query: 36 NEIVAVKILDFERDNSDLSNISREAQTMILVDHPNVLKSH--CSFVSDHNLWVVMPFMSG 93
E VAVK L E + ++++ +E + + + H N++K C+ + + ++M F+
Sbjct: 50 GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPS 109
Query: 94 GSCLHILKAAYPDGFEEVVIATILR---EVLKGLDYLHHHGHIHRDVKSGNILIDVRGAI 150
GS LK P ++ + L+ ++ KG+DYL ++HRD+ + N+L++ +
Sbjct: 110 GS----LKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQV 165
Query: 151 KLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALEL 208
K+GDFG++ + + +++ W APE + Q Y +D+WSFG+T EL
Sbjct: 166 KIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFY-IASDVWSFGVTLHEL 222
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 95/187 (50%), Gaps = 13/187 (6%)
Query: 40 AVKILDFER--DNSDLSNISREAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCL 97
A+KILD ++ + + E + + V+ P ++K SF + NL++VM +++GG
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 98 HILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGV 157
L+ F E +++ +YLH I+RD+K N+LID +G I++ DFG
Sbjct: 130 SHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
Query: 158 SACLFDSGDRQRMRN-TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFS 216
+ R + R GTP +APE++ GY+ D W+ G+ E+A G+ PF
Sbjct: 188 AK-------RVKGRTWXLCGTPEALAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
Query: 217 KYPPMKV 223
P+++
Sbjct: 240 ADQPIQI 246
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 107/213 (50%), Gaps = 11/213 (5%)
Query: 18 EVGQGVSASVHRALCIPFN----EIVAVKILDFERDNSDLSNISREAQTMILVDHPNVLK 73
++G+G V P N E+VAVK L + S +E + + H +++K
Sbjct: 21 DLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIK 80
Query: 74 SH--CSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHG 131
C + +L +VM ++ GS L + G ++++ +++ +G+ YLH
Sbjct: 81 YKGCCEDQGEKSLQLVMEYVPLGSLRDYL-PRHSIGLAQLLL--FAQQICEGMAYLHAQH 137
Query: 132 HIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHG 191
+IHR++ + N+L+D +K+GDFG++ + + + R+R W APE +++
Sbjct: 138 YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKF 197
Query: 192 YDFKADIWSFGITALELAHGHAPFSKYPPMKVL 224
Y + +D+WSFG+T EL H S+ PP K L
Sbjct: 198 Y-YASDVWSFGVTLYELL-THCDSSQSPPTKFL 228
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 127/291 (43%), Gaps = 31/291 (10%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDL-SNISREAQTMILVDHP 69
E Y E++G+G V++A + E A+K + E+++ + S RE + + H
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHS 60
Query: 70 NVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHH 129
N++K + + L V+ F L L G E V + L ++L G+ Y H
Sbjct: 61 NIVKLYDVIHTKKRL--VLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHD 118
Query: 130 HGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQL 189
+HRD+K N+LI+ G +K+ DFG++ G R V T + AP+V+
Sbjct: 119 RRVLHRDLKPQNLLINREGELKIADFGLARAF---GIPVRKYTHEVVTLWYRAPDVLMGS 175
Query: 190 HGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTL--------QNAP-----PGLD 236
Y DIWS G E+ +G F L+ +N P P D
Sbjct: 176 KKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYD 235
Query: 237 -----YE------RDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSFFKQ 276
YE + +S +++ L DP++R +AK+ L+H++FK+
Sbjct: 236 PNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 128/281 (45%), Gaps = 25/281 (8%)
Query: 1 MDKKKYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKIL---DFERDNSDLSNIS 57
M K+K+ I + + + +G+G +V+ A I+A+K+L E++ + +
Sbjct: 6 MPKRKFTI--DDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVE-HQLR 62
Query: 58 REAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATIL 117
RE + + HPN+L+ + F +++++ F G L+ F+E AT +
Sbjct: 63 REIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKH--GRFDEQRSATFM 120
Query: 118 REVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGT 177
E+ L Y H IHRD+K N+L+ +G +K+ DFG S S R+ M GT
Sbjct: 121 EELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHA-PSLRRRXM----CGT 175
Query: 178 PCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTLQNAPPG 234
++ PE++E +D K D+W G+ E G PF S + ++ PP
Sbjct: 176 LDYLPPEMIEG-KTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPF 234
Query: 235 LDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSFFK 275
L S K +I+ L P +R K +++H + K
Sbjct: 235 L--------SDGSKDLISKLLRYHPPQRLPLKGVMEHPWVK 267
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 109/224 (48%), Gaps = 20/224 (8%)
Query: 56 ISREAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIAT 115
I RE + V H NV+ H + + ++ +++ +SGG L A + E +
Sbjct: 62 IEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL--AQKESLSEEEATS 119
Query: 116 ILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGA----IKLGDFGVSACLFDSGDRQRMR 171
++++L G++YLH H D+K NI++ + IKL DFG++ + D + +
Sbjct: 120 FIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE---FK 176
Query: 172 NTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNA 231
N F GTP ++APE++ +AD+WS G+ L G +PF + TL N
Sbjct: 177 NIF-GTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE----TLANI 230
Query: 232 PPGLDYERDRKF----SKSFKQMIASCLVKDPSKRPSAKKLLKH 271
+ Y+ D +F S+ K I LVK+ KR + ++ L+H
Sbjct: 231 -TAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRH 273
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 127/291 (43%), Gaps = 31/291 (10%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDL-SNISREAQTMILVDHP 69
E Y E++G+G V++A + E A+K + E+++ + S RE + + H
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHS 60
Query: 70 NVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHH 129
N++K + + L V+ F L L G E V + L ++L G+ Y H
Sbjct: 61 NIVKLYDVIHTKKRL--VLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHD 118
Query: 130 HGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQL 189
+HRD+K N+LI+ G +K+ DFG++ G R V T + AP+V+
Sbjct: 119 RRVLHRDLKPQNLLINREGELKIADFGLARAF---GIPVRKYTHEVVTLWYRAPDVLMGS 175
Query: 190 HGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTL--------QNAP-----PGLD 236
Y DIWS G E+ +G F L+ +N P P D
Sbjct: 176 KKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYD 235
Query: 237 -----YE------RDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSFFKQ 276
YE + +S +++ L DP++R +AK+ L+H++FK+
Sbjct: 236 PNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 126/291 (43%), Gaps = 32/291 (10%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDL-SNISREAQTMILVDHP 69
E Y E+VG+G V++A IVA+K + + ++ + S RE + + HP
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQ-GRIVALKRIRLDAEDEGIPSTAIREISLLKELHHP 79
Query: 70 NVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHH 129
N++ S+ L +V FM L + G ++ I L ++L+G+ + H
Sbjct: 80 NIVSLIDVIHSERCLTLVFEFMEKD--LKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQ 137
Query: 130 HGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQL 189
H +HRD+K N+LI+ GA+KL DFG++ G R V T + AP+V+
Sbjct: 138 HRILHRDLKPQNLLINSDGALKLADFGLARAF---GIPVRSYTHEVVTLWYRAPDVLMGS 194
Query: 190 HGYDFKADIWSFGITALELAHGHAPF---------------------SKYPPMKVLLMTL 228
Y DIWS G E+ G F ++P ++ L +
Sbjct: 195 KKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWK 254
Query: 229 QNAPPGLDYERDRKFSKSFKQ----MIASCLVKDPSKRPSAKKLLKHSFFK 275
Q + + F Q ++++ L DP+KR SA+ + H +FK
Sbjct: 255 QRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFK 305
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 95/187 (50%), Gaps = 13/187 (6%)
Query: 40 AVKILDFER--DNSDLSNISREAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCL 97
A+KILD ++ + + E + + V+ P ++K SF + NL++VM +++GG
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 98 HILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGV 157
L+ F E +++ +YLH I+RD+K N+LID +G I++ DFG
Sbjct: 130 SHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
Query: 158 SACLFDSGDRQRMRN-TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFS 216
+ R + R GTP ++AP ++ GY+ D W+ G+ E+A G+ PF
Sbjct: 188 AK-------RVKGRTWXLCGTPEYLAPAIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
Query: 217 KYPPMKV 223
P+++
Sbjct: 240 ADQPIQI 246
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 126/291 (43%), Gaps = 32/291 (10%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDL-SNISREAQTMILVDHP 69
E Y E+VG+G V++A IVA+K + + ++ + S RE + + HP
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQ-GRIVALKRIRLDAEDEGIPSTAIREISLLKELHHP 79
Query: 70 NVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHH 129
N++ S+ L +V FM L + G ++ I L ++L+G+ + H
Sbjct: 80 NIVSLIDVIHSERCLTLVFEFMEKD--LKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQ 137
Query: 130 HGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQL 189
H +HRD+K N+LI+ GA+KL DFG++ G R V T + AP+V+
Sbjct: 138 HRILHRDLKPQNLLINSDGALKLADFGLARAF---GIPVRSYTHEVVTLWYRAPDVLMGS 194
Query: 190 HGYDFKADIWSFGITALELAHGHAPF---------------------SKYPPMKVLLMTL 228
Y DIWS G E+ G F ++P ++ L +
Sbjct: 195 KKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWK 254
Query: 229 QNAPPGLDYERDRKFSKSFKQ----MIASCLVKDPSKRPSAKKLLKHSFFK 275
Q + + F Q ++++ L DP+KR SA+ + H +FK
Sbjct: 255 QRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFK 305
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 93/177 (52%), Gaps = 10/177 (5%)
Query: 37 EIVAVKILDFERDNSDLSNISREAQTMILVDHPNVLKSH--CSFVSDHNLWVVMPFMSGG 94
E VAVK L E + ++++ +E + + + H N++K C+ + + ++M F+ G
Sbjct: 39 EQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSG 98
Query: 95 SCLHILKAAYPDGFEEVVIATILR---EVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIK 151
S LK P ++ + L+ ++ KG+DYL ++HRD+ + N+L++ +K
Sbjct: 99 S----LKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVK 154
Query: 152 LGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALEL 208
+GDFG++ + + +++ W APE + Q Y +D+WSFG+T EL
Sbjct: 155 IGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFY-IASDVWSFGVTLHEL 210
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 112/260 (43%), Gaps = 14/260 (5%)
Query: 14 TLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPNVLK 73
T +E+G G VH + +++ I + D EA+ M+ + HP +++
Sbjct: 10 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIE---EAEVMMKLSHPKLVQ 66
Query: 74 SHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHI 133
+ + + +V FM G L+ E ++ L +V +G+ YL I
Sbjct: 67 LYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCL-DVCEGMAYLEEASVI 125
Query: 134 HRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPC-WMAPEVMEQLHGY 192
HRD+ + N L+ IK+ DFG++ + D Q +T P W +PEV Y
Sbjct: 126 HRDLAARNCLVGENQVIKVSDFGMTRFVLDD---QYTSSTGTKFPVKWASPEVF-SFSRY 181
Query: 193 DFKADIWSFGITALE-LAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMI 251
K+D+WSFG+ E + G P+ +V +++ G + R S Q++
Sbjct: 182 SSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV----VEDISTGFRLYKPRLASTHVYQIM 237
Query: 252 ASCLVKDPSKRPSAKKLLKH 271
C + P RP+ +LL+
Sbjct: 238 NHCWKERPEDRPAFSRLLRQ 257
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 127/291 (43%), Gaps = 31/291 (10%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDL-SNISREAQTMILVDHP 69
E Y E++G+G V++A + E A+K + E+++ + S RE + + H
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHS 60
Query: 70 NVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHH 129
N++K + + L V+ F L L G E V + L ++L G+ Y H
Sbjct: 61 NIVKLYDVIHTKKRL--VLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHD 118
Query: 130 HGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQL 189
+HRD+K N+LI+ G +K+ DFG++ G R + T + AP+V+
Sbjct: 119 RRVLHRDLKPQNLLINREGELKIADFGLARAF---GIPVRKYTHEIVTLWYRAPDVLMGS 175
Query: 190 HGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTL--------QNAP-----PGLD 236
Y DIWS G E+ +G F L+ +N P P D
Sbjct: 176 KKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYD 235
Query: 237 -----YE------RDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSFFKQ 276
YE + +S +++ L DP++R +AK+ L+H++FK+
Sbjct: 236 PNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 126/258 (48%), Gaps = 20/258 (7%)
Query: 13 YTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFER----DNSDLSNISREAQTMILV-D 67
++++ +G+G V+ ++ A+K LD +R L+ R +++ D
Sbjct: 190 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 249
Query: 68 HPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYL 127
P ++ +F + L ++ M+GG LH + + F E + E++ GL+++
Sbjct: 250 CPFIVCMSYAFHTPDKLSFILDLMNGGD-LHYHLSQH-GVFSEADMRFYAAEIILGLEHM 307
Query: 128 HHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVME 187
H+ ++RD+K NIL+D G +++ D G+ AC F ++ + VGT +MAPEV++
Sbjct: 308 HNRFVVYRDLKPANILLDEHGHVRISDLGL-ACDFS----KKKPHASVGTHGYMAPEVLQ 362
Query: 188 QLHGYDFKADIWSFGITALELAHGHAPFSKYPPM---KVLLMTLQNAPPGLDYERDRKFS 244
+ YD AD +S G +L GH+PF ++ ++ MTL A E FS
Sbjct: 363 KGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMA-----VELPDSFS 417
Query: 245 KSFKQMIASCLVKDPSKR 262
+ ++ L +D ++R
Sbjct: 418 PELRSLLEGLLQRDVNRR 435
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 126/258 (48%), Gaps = 20/258 (7%)
Query: 13 YTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFER----DNSDLSNISREAQTMILV-D 67
++++ +G+G V+ ++ A+K LD +R L+ R +++ D
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 250
Query: 68 HPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYL 127
P ++ +F + L ++ M+GG LH + + F E + E++ GL+++
Sbjct: 251 CPFIVCMSYAFHTPDKLSFILDLMNGGD-LHYHLSQH-GVFSEADMRFYAAEIILGLEHM 308
Query: 128 HHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVME 187
H+ ++RD+K NIL+D G +++ D G+ AC F ++ + VGT +MAPEV++
Sbjct: 309 HNRFVVYRDLKPANILLDEHGHVRISDLGL-ACDFS----KKKPHASVGTHGYMAPEVLQ 363
Query: 188 QLHGYDFKADIWSFGITALELAHGHAPFSKYPPM---KVLLMTLQNAPPGLDYERDRKFS 244
+ YD AD +S G +L GH+PF ++ ++ MTL A E FS
Sbjct: 364 KGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMA-----VELPDSFS 418
Query: 245 KSFKQMIASCLVKDPSKR 262
+ ++ L +D ++R
Sbjct: 419 PELRSLLEGLLQRDVNRR 436
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 130/301 (43%), Gaps = 53/301 (17%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDL-SNISREAQTMILVDHP 69
+ Y E++G+G +V +A +EIVA+K + + D+ + S+ RE + + H
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61
Query: 70 NVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPD---GFEEVVIATILREVLKGLDY 126
N+++ H SD L +V F C LK + + ++ + L ++LKGL +
Sbjct: 62 NIVRLHDVLHSDKKLTLVFEF-----CDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGF 116
Query: 127 LHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVM 186
H +HRD+K N+LI+ G +KL +FG++ G R + V T + P+V+
Sbjct: 117 CHSRNVLHRDLKPQNLLINRNGELKLANFGLARAF---GIPVRCYSAEVVTLWYRPPDVL 173
Query: 187 EQLHGYDFKADIWSFGITALELAHGHAPF----------------------------SKY 218
Y D+WS G ELA+ P +K
Sbjct: 174 FGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKL 233
Query: 219 P-----PMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSF 273
P PM +L N P K + + + ++ + L +P +R SA++ L+H +
Sbjct: 234 PDYKPYPMYPATTSLVNVVP--------KLNATGRDLLQNLLKCNPVQRISAEEALQHPY 285
Query: 274 F 274
F
Sbjct: 286 F 286
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 107/236 (45%), Gaps = 15/236 (6%)
Query: 39 VAVKILDFERDNSDLSNISREAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLH 98
VA+K L + EA M DHPN+++ + +V +M GS
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 99 ILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVS 158
L+ + F + + +LR + G+ YL G++HRD+ + NILI+ K+ DFG++
Sbjct: 136 FLRK-HDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLA 194
Query: 159 ACLFDSGDRQRMRNTFVG-TPC-WMAPEVMEQLHGYDFKADIWSFGITALE-LAHGHAPF 215
L D D + T G P W +PE + + +D+WS+GI E +++G P+
Sbjct: 195 RVLED--DPEAAYTTRGGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVMSYGERPY 251
Query: 216 SKYPPMKVLLMTLQNA--PPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLL 269
+ V+ + PP +D + Q++ C KD + RP ++++
Sbjct: 252 WEMSNQDVIKAVDEGYRLPPPMD------CPAALYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 126/258 (48%), Gaps = 20/258 (7%)
Query: 13 YTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFER----DNSDLSNISREAQTMILV-D 67
++++ +G+G V+ ++ A+K LD +R L+ R +++ D
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 250
Query: 68 HPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYL 127
P ++ +F + L ++ M+GG LH + + F E + E++ GL+++
Sbjct: 251 CPFIVCMSYAFHTPDKLSFILDLMNGGD-LHYHLSQH-GVFSEADMRFYAAEIILGLEHM 308
Query: 128 HHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVME 187
H+ ++RD+K NIL+D G +++ D G+ AC F ++ + VGT +MAPEV++
Sbjct: 309 HNRFVVYRDLKPANILLDEHGHVRISDLGL-ACDFS----KKKPHASVGTHGYMAPEVLQ 363
Query: 188 QLHGYDFKADIWSFGITALELAHGHAPFSKYPPM---KVLLMTLQNAPPGLDYERDRKFS 244
+ YD AD +S G +L GH+PF ++ ++ MTL A E FS
Sbjct: 364 KGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMA-----VELPDSFS 418
Query: 245 KSFKQMIASCLVKDPSKR 262
+ ++ L +D ++R
Sbjct: 419 PELRSLLEGLLQRDVNRR 436
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 126/258 (48%), Gaps = 20/258 (7%)
Query: 13 YTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFER----DNSDLSNISREAQTMILV-D 67
++++ +G+G V+ ++ A+K LD +R L+ R +++ D
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 250
Query: 68 HPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYL 127
P ++ +F + L ++ M+GG LH + + F E + E++ GL+++
Sbjct: 251 CPFIVCMSYAFHTPDKLSFILDLMNGGD-LHYHLSQH-GVFSEADMRFYAAEIILGLEHM 308
Query: 128 HHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVME 187
H+ ++RD+K NIL+D G +++ D G+ AC F ++ + VGT +MAPEV++
Sbjct: 309 HNRFVVYRDLKPANILLDEHGHVRISDLGL-ACDFS----KKKPHASVGTHGYMAPEVLQ 363
Query: 188 QLHGYDFKADIWSFGITALELAHGHAPFSKYPPM---KVLLMTLQNAPPGLDYERDRKFS 244
+ YD AD +S G +L GH+PF ++ ++ MTL A E FS
Sbjct: 364 KGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMA-----VELPDSFS 418
Query: 245 KSFKQMIASCLVKDPSKR 262
+ ++ L +D ++R
Sbjct: 419 PELRSLLEGLLQRDVNRR 436
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 109/224 (48%), Gaps = 20/224 (8%)
Query: 56 ISREAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIAT 115
I RE + V H NV+ H + + ++ +++ +SGG L A + E +
Sbjct: 62 IEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL--AQKESLSEEEATS 119
Query: 116 ILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGA----IKLGDFGVSACLFDSGDRQRMR 171
++++L G++YLH H D+K NI++ + IKL DFG++ + D + +
Sbjct: 120 FIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE---FK 176
Query: 172 NTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNA 231
N F GTP ++APE++ +AD+WS G+ L G +PF + TL N
Sbjct: 177 NIF-GTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE----TLANI 230
Query: 232 PPGLDYERDRKF----SKSFKQMIASCLVKDPSKRPSAKKLLKH 271
+ Y+ D +F S+ K I LVK+ KR + ++ L+H
Sbjct: 231 -TAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRH 273
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 123/269 (45%), Gaps = 22/269 (8%)
Query: 2 DKKKYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQ 61
+K + I E L +++G G V A +N+ V + + + + EA
Sbjct: 6 EKDAWEIPRESLKLEKKLGAGQFGEVWMAT---YNKHTKVAVKTMKPGSMSVEAFLAEAN 62
Query: 62 TMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVV--IATILRE 119
M + H ++K H + V+ ++++ FM+ GS L LK+ +G ++ + + +
Sbjct: 63 VMKTLQHDKLVKLH-AVVTKEPIYIITEFMAKGSLLDFLKSD--EGSKQPLPKLIDFSAQ 119
Query: 120 VLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPC 179
+ +G+ ++ +IHRD+++ NIL+ K+ DFG++ + D+ R F P
Sbjct: 120 IAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKF---PI 176
Query: 180 -WMAPEVMEQLHGYDFKADIWSFGITALELA-HGHAPFSKYPPMK--VLLMTLQNAPPGL 235
W APE + + K+D+WSFGI +E+ +G P YP M ++ L+ G
Sbjct: 177 KWTAPEAI-NFGSFTIKSDVWSFGILLMEIVTYGRIP---YPGMSNPEVIRALER---GY 229
Query: 236 DYERDRKFSKSFKQMIASCLVKDPSKRPS 264
R + ++ C P +RP+
Sbjct: 230 RMPRPENCPEELYNIMMRCWKNRPEERPT 258
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 106/236 (44%), Gaps = 15/236 (6%)
Query: 39 VAVKILDFERDNSDLSNISREAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLH 98
VA+K L + EA M DHPN+++ + +V +M GS
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 99 ILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVS 158
L+ + F + + +LR + G+ YL G +HRD+ + NILI+ K+ DFG+S
Sbjct: 136 FLRK-HDAQFTVIQLVGMLRGIASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLS 194
Query: 159 ACLFDSGDRQRMRNTFVG-TPC-WMAPEVMEQLHGYDFKADIWSFGITALE-LAHGHAPF 215
L D D + T G P W +PE + + +D+WS+GI E +++G P+
Sbjct: 195 RVLED--DPEAAYTTRGGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVMSYGERPY 251
Query: 216 SKYPPMKVLLMTLQNA--PPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLL 269
+ V+ + PP +D + Q++ C KD + RP ++++
Sbjct: 252 WEMSNQDVIKAVDEGYRLPPPMD------CPAALYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 109/224 (48%), Gaps = 20/224 (8%)
Query: 56 ISREAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIAT 115
I RE + V H NV+ H + + ++ +++ +SGG L A + E +
Sbjct: 62 IEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL--AQKESLSEEEATS 119
Query: 116 ILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGA----IKLGDFGVSACLFDSGDRQRMR 171
++++L G++YLH H D+K NI++ + IKL DFG++ + D + +
Sbjct: 120 FIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE---FK 176
Query: 172 NTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNA 231
N F GTP ++APE++ +AD+WS G+ L G +PF + TL N
Sbjct: 177 NIF-GTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE----TLANI 230
Query: 232 PPGLDYERDRKF----SKSFKQMIASCLVKDPSKRPSAKKLLKH 271
+ Y+ D +F S+ K I LVK+ KR + ++ L+H
Sbjct: 231 -TSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRH 273
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 112/260 (43%), Gaps = 14/260 (5%)
Query: 14 TLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPNVLK 73
T +E+G G VH + +++ I + D EA+ M+ + HP +++
Sbjct: 10 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIE---EAEVMMKLSHPKLVQ 66
Query: 74 SHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHI 133
+ + + +V FM G L+ E ++ L +V +G+ YL I
Sbjct: 67 LYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCL-DVCEGMAYLEEACVI 125
Query: 134 HRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPC-WMAPEVMEQLHGY 192
HRD+ + N L+ IK+ DFG++ + D Q +T P W +PEV Y
Sbjct: 126 HRDLAARNCLVGENQVIKVSDFGMTRFVLDD---QYTSSTGTKFPVKWASPEVF-SFSRY 181
Query: 193 DFKADIWSFGITALE-LAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMI 251
K+D+WSFG+ E + G P+ +V +++ G + R S Q++
Sbjct: 182 SSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV----VEDISTGFRLYKPRLASTHVYQIM 237
Query: 252 ASCLVKDPSKRPSAKKLLKH 271
C + P RP+ +LL+
Sbjct: 238 NHCWKERPEDRPAFSRLLRQ 257
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 128/281 (45%), Gaps = 25/281 (8%)
Query: 1 MDKKKYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKIL---DFERDNSDLSNIS 57
M K+K+ I + + + +G+G +V+ A I+A+K+L E++ + +
Sbjct: 7 MPKRKFTI--DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVE-HQLR 63
Query: 58 REAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATIL 117
RE + + HPN+L+ + F +++++ F G L+ F+E AT +
Sbjct: 64 REIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKH--GRFDEQRSATFM 121
Query: 118 REVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGT 177
E+ L Y H IHRD+K N+L+ +G +K+ DFG S S R+ M GT
Sbjct: 122 EELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHA-PSLRRRXM----CGT 176
Query: 178 PCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTLQNAPPG 234
++ PE++E +D K D+W G+ E G PF S + ++ PP
Sbjct: 177 LDYLPPEMIEG-KTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPF 235
Query: 235 LDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSFFK 275
L S K +I+ L P +R K +++H + K
Sbjct: 236 L--------SDGSKDLISKLLRYHPPQRLPLKGVMEHPWVK 268
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 127/297 (42%), Gaps = 58/297 (19%)
Query: 45 DFERDNSDLSNISREA-----QTMILVDHPNVLKSHCS-FVSDHN-LWVVMPFMSGGSCL 97
DF + N+D +I + + I+ D N C +++++ ++++ +M S L
Sbjct: 72 DFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSIL 131
Query: 98 ------HILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHI-HRDVKSGNILIDVRGAI 150
+L Y VI I++ VL Y+H+ +I HRDVK NIL+D G +
Sbjct: 132 KFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRV 191
Query: 151 KLGDFGVSACLFD---SGDRQRMRNTFVGTPCWMAPEVMEQLHGYD-FKADIWSFGITAL 206
KL DFG S + D G R GT +M PE Y+ K DIWS GI
Sbjct: 192 KLSDFGESEYMVDKKIKGSR--------GTYEFMPPEFFSNESSYNGAKVDIWSLGICLY 243
Query: 207 ELAHGHAPFSKYPPMKVLLMTLQN--APPGLDYERDRK-FSKSFKQMIASC--------- 254
+ + PFS +K+ L+ L N ++Y DR F ++C
Sbjct: 244 VMFYNVVPFS----LKISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNED 299
Query: 255 -------LVKDPSKRPSAKKLLKHSFFKQARSNEYIARTLLEGLPALGDRIKALKKK 304
L K+P++R +++ LKH E++A T +E L + +KK
Sbjct: 300 IDFLKLFLRKNPAERITSEDALKH---------EWLADTNIEDLREFSKELYKKRKK 347
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 128/281 (45%), Gaps = 25/281 (8%)
Query: 1 MDKKKYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKIL---DFERDNSDLSNIS 57
M K+K+ I + + + +G+G +V+ A I+A+K+L E++ + +
Sbjct: 6 MPKRKFTI--DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVE-HQLR 62
Query: 58 REAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATIL 117
RE + + HPN+L+ + F +++++ F G L+ F+E AT +
Sbjct: 63 REIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKH--GRFDEQRSATFM 120
Query: 118 REVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGT 177
E+ L Y H IHRD+K N+L+ +G +K+ DFG S S R+ M GT
Sbjct: 121 EELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHA-PSLRRRXM----CGT 175
Query: 178 PCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTLQNAPPG 234
++ PE++E +D K D+W G+ E G PF S + ++ PP
Sbjct: 176 LDYLPPEMIEG-KTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPF 234
Query: 235 LDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSFFK 275
L S K +I+ L P +R K +++H + K
Sbjct: 235 L--------SDGSKDLISKLLRYHPPQRLPLKGVMEHPWVK 267
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 115/260 (44%), Gaps = 14/260 (5%)
Query: 14 TLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPNVLK 73
T +E+G G VH + + VA+K + + D + EA+ M+ + HP +++
Sbjct: 30 TFVQEIGSGQFGLVHLGYWLN-KDKVAIKTIKEGSMSED--DFIEEAEVMMKLSHPKLVQ 86
Query: 74 SHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHI 133
+ + + +V FM G L+ E ++ L +V +G+ YL I
Sbjct: 87 LYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCL-DVCEGMAYLEEACVI 145
Query: 134 HRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPC-WMAPEVMEQLHGY 192
HRD+ + N L+ IK+ DFG++ + D Q +T P W +PEV Y
Sbjct: 146 HRDLAARNCLVGENQVIKVSDFGMTRFVLDD---QYTSSTGTKFPVKWASPEVF-SFSRY 201
Query: 193 DFKADIWSFGITALE-LAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMI 251
K+D+WSFG+ E + G P+ +V +++ G + R S Q++
Sbjct: 202 SSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV----VEDISTGFRLYKPRLASTHVYQIM 257
Query: 252 ASCLVKDPSKRPSAKKLLKH 271
C + P RP+ +LL+
Sbjct: 258 NHCWKERPEDRPAFSRLLRQ 277
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 106/236 (44%), Gaps = 15/236 (6%)
Query: 39 VAVKILDFERDNSDLSNISREAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLH 98
VA+K L + EA M DHPN+++ + +V M GS
Sbjct: 47 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDS 106
Query: 99 ILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVS 158
L+ + F + + +LR + G+ YL G++HRD+ + NILI+ K+ DFG+S
Sbjct: 107 FLRK-HDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 165
Query: 159 ACLFDSGDRQRMRNTFVG-TPC-WMAPEVMEQLHGYDFKADIWSFGITALE-LAHGHAPF 215
L D D + T G P W +PE + + +D+WS+GI E +++G P+
Sbjct: 166 RVLED--DPEAAYTTRGGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVMSYGERPY 222
Query: 216 SKYPPMKVLLMTLQNA--PPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLL 269
+ V+ + PP +D + Q++ C KD + RP ++++
Sbjct: 223 WEMSNQDVIKAVDEGYRLPPPMD------CPAALYQLMLDCWQKDRNNRPKFEQIV 272
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 131/304 (43%), Gaps = 43/304 (14%)
Query: 10 AEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDH- 68
+ Y + E +G G V A + VA+K + D ++N R + + ++ H
Sbjct: 54 GDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDV--VTNAKRTLRELKILKHF 111
Query: 69 --------PNVLKSHCSFVSDHNLWVVMPFMSGGSCLH-ILKAAYPDGFEEVVIATILRE 119
++L+ + +++VV+ M S LH I+ ++ P E V L +
Sbjct: 112 KHDNIIAIKDILRPTVPYGEFKSVYVVLDLME--SDLHQIIHSSQPLTLEHV--RYFLYQ 167
Query: 120 VLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDS-GDRQRMRNTFVGTP 178
+L+GL Y+H IHRD+K N+L++ +K+GDFG++ L S + Q +V T
Sbjct: 168 LLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATR 227
Query: 179 CWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTLQNAPP-- 233
+ APE+M LH Y D+WS G E+ F + +++++M L P
Sbjct: 228 WYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAV 287
Query: 234 --GLDYERDRKFSKSFK-------------------QMIASCLVKDPSKRPSAKKLLKHS 272
+ ER R + +S ++ L +PS R SA L+H
Sbjct: 288 IQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHP 347
Query: 273 FFKQ 276
F +
Sbjct: 348 FLAK 351
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 106/236 (44%), Gaps = 15/236 (6%)
Query: 39 VAVKILDFERDNSDLSNISREAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLH 98
VA+K L + EA M DHPN+++ + +V +M GS
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 99 ILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVS 158
L+ + F + + +LR + G+ YL G++HRD+ + NILI+ K+ DFG+
Sbjct: 136 FLRK-HDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLG 194
Query: 159 ACLFDSGDRQRMRNTFVG-TPC-WMAPEVMEQLHGYDFKADIWSFGITALE-LAHGHAPF 215
L D D + T G P W +PE + + +D+WS+GI E +++G P+
Sbjct: 195 RVLED--DPEAAYTTRGGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVMSYGERPY 251
Query: 216 SKYPPMKVLLMTLQNA--PPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLL 269
+ V+ + PP +D + Q++ C KD + RP ++++
Sbjct: 252 WEMSNQDVIKAVDEGYRLPPPMD------CPAALYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 112/260 (43%), Gaps = 14/260 (5%)
Query: 14 TLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPNVLK 73
T +E+G G VH + +++ I + D EA+ M+ + HP +++
Sbjct: 8 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIE---EAEVMMKLSHPKLVQ 64
Query: 74 SHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHI 133
+ + + +V FM G L+ E ++ L +V +G+ YL I
Sbjct: 65 LYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCL-DVCEGMAYLEEACVI 123
Query: 134 HRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPC-WMAPEVMEQLHGY 192
HRD+ + N L+ IK+ DFG++ + D Q +T P W +PEV Y
Sbjct: 124 HRDLAARNCLVGENQVIKVSDFGMTRFVLDD---QYTSSTGTKFPVKWASPEVF-SFSRY 179
Query: 193 DFKADIWSFGITALE-LAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMI 251
K+D+WSFG+ E + G P+ +V +++ G + R S Q++
Sbjct: 180 SSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV----VEDISTGFRLYKPRLASTHVYQIM 235
Query: 252 ASCLVKDPSKRPSAKKLLKH 271
C + P RP+ +LL+
Sbjct: 236 NHCWKERPEDRPAFSRLLRQ 255
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 114/238 (47%), Gaps = 20/238 (8%)
Query: 56 ISREAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIAT 115
I RE + V H NV+ H + + ++ +++ +SGG L A + E +
Sbjct: 62 IEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL--AQKESLSEEEATS 119
Query: 116 ILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGA----IKLGDFGVSACLFDSGDRQRMR 171
++++L G++YLH H D+K NI++ + IKL DFG++ + D + +
Sbjct: 120 FIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE---FK 176
Query: 172 NTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNA 231
N F GTP ++APE++ +AD+WS G+ L G +PF + TL N
Sbjct: 177 NIF-GTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE----TLANI 230
Query: 232 PPGLDYERDRKF----SKSFKQMIASCLVKDPSKRPSAKKLLKHSFFKQARSNEYIAR 285
+ Y+ D +F S+ K I LVK+ KR + ++ L+H + + + + R
Sbjct: 231 -TSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQAMVR 287
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 134/308 (43%), Gaps = 44/308 (14%)
Query: 6 YPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMIL 65
+ +G E Y + E +G G V A + VA+K + D ++N R + + +
Sbjct: 50 FDVGDE-YEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDV--VTNAKRTLRELKI 106
Query: 66 VDH---------PNVLKSHCSFVSDHNLWVVMPFMSGGSCLH-ILKAAYPDGFEEVVIAT 115
+ H ++L+ + +++VV+ M S LH I+ ++ P E V
Sbjct: 107 LKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLME--SDLHQIIHSSQPLTLEHV--RY 162
Query: 116 ILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDS-GDRQRMRNTF 174
L ++L+GL Y+H IHRD+K N+L++ +K+GDFG++ L S + Q +
Sbjct: 163 FLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEY 222
Query: 175 VGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTLQNA 231
V T + APE+M LH Y D+WS G E+ F + +++++M L
Sbjct: 223 VATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTP 282
Query: 232 PP----GLDYERDRKFSKSFK-------------------QMIASCLVKDPSKRPSAKKL 268
P + ER R + +S ++ L +PS R SA
Sbjct: 283 SPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAA 342
Query: 269 LKHSFFKQ 276
L+H F +
Sbjct: 343 LRHPFLAK 350
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 123/304 (40%), Gaps = 37/304 (12%)
Query: 8 IGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMIL-- 65
+ Y E+G G +V++A VA+K + L IS + +L
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLP-ISTVREVALLRR 59
Query: 66 ---VDHPNVLKSH---CSFVSDHNLWVVMPFMSGGSCLHI-LKAAYPDGFEEVVIATILR 118
+HPNV++ + +D + V + F L L A P G I ++R
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMR 119
Query: 119 EVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTP 178
+ L+GLD+LH + +HRD+K NIL+ G +KL DFG++ Q + V T
Sbjct: 120 QFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIY----SYQMALDPVVVTL 175
Query: 179 CWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVL--LMTLQNAPPGLD 236
+ APEV+ Q Y D+WS G E+ F L + L PP D
Sbjct: 176 WYRAPEVLLQ-STYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDD 234
Query: 237 YERDRKFSK--------------------SFKQMIASCLVKDPSKRPSAKKLLKHSFFKQ 276
+ RD + S Q++ L +P KR SA + L+HS+ +
Sbjct: 235 WPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHK 294
Query: 277 ARSN 280
N
Sbjct: 295 DEGN 298
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 106/236 (44%), Gaps = 15/236 (6%)
Query: 39 VAVKILDFERDNSDLSNISREAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLH 98
VA+K L + EA M DHPN+++ + +V M GS
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDS 135
Query: 99 ILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVS 158
L+ + F + + +LR + G+ YL G++HRD+ + NILI+ K+ DFG+S
Sbjct: 136 FLRK-HDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 194
Query: 159 ACLFDSGDRQRMRNTFVG-TPC-WMAPEVMEQLHGYDFKADIWSFGITALE-LAHGHAPF 215
L D D + T G P W +PE + + +D+WS+GI E +++G P+
Sbjct: 195 RVLED--DPEAAYTTRGGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVMSYGERPY 251
Query: 216 SKYPPMKVLLMTLQNA--PPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLL 269
+ V+ + PP +D + Q++ C KD + RP ++++
Sbjct: 252 WEMSNQDVIKAVDEGYRLPPPMD------CPAALYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 105/224 (46%), Gaps = 13/224 (5%)
Query: 59 EAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSC-LHILKAAYPDGFEEVVIATIL 117
E Q + V+ V+ ++ + L +V+ M+GG HI GF E
Sbjct: 234 EKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQA-GFPEARAVFYA 292
Query: 118 REVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGT 177
E+ GL+ LH ++RD+K NIL+D G I++ D G+ A G + R VGT
Sbjct: 293 AEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGL-AVHVPEGQTIKGR---VGT 348
Query: 178 PCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDY 237
+MAPEV++ Y F D W+ G E+ G +PF + K+ ++ +
Sbjct: 349 VGYMAPEVVKN-ERYTFSPDWWALGCLLYEMIAGQSPFQQR-KKKIKREEVERLVKEVPE 406
Query: 238 ERDRKFSKSFKQMIASCLVKDPSKR-----PSAKKLLKHSFFKQ 276
E +FS + + + L KDP++R SA+++ +H FK+
Sbjct: 407 EYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKK 450
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 127/317 (40%), Gaps = 49/317 (15%)
Query: 13 YTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFER----DNSDLSNISREAQTMILVDH 68
Y L +GQG V A+ I A+KI++ + + D+ I E + M + H
Sbjct: 28 YHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHH 87
Query: 69 PNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPD---------------------- 106
PN+ + + + + + +VM GG L L D
Sbjct: 88 PNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNE 147
Query: 107 --------GFEEVV--------IATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGA- 149
GF E + I+ I+R++ L YLH+ G HRD+K N L +
Sbjct: 148 EAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSF 207
Query: 150 -IKLGDFGVSACLF--DSGDRQRMRNTFVGTPCWMAPEVMEQLH-GYDFKADIWSFGITA 205
IKL DFG+S + ++G+ M T GTP ++APEV+ + Y K D WS G+
Sbjct: 208 EIKLVDFGLSKEFYKLNNGEYYGM-TTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLL 266
Query: 206 LELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSA 265
L G PF + L N + S + ++++ L ++ +R A
Sbjct: 267 HLLLMGAVPFPGVNDADTISQVL-NKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDA 325
Query: 266 KKLLKHSFFKQARSNEY 282
+ L+H + Q Y
Sbjct: 326 MRALQHPWISQFSDKIY 342
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 123/269 (45%), Gaps = 22/269 (8%)
Query: 2 DKKKYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQ 61
+K + I E L +++G G V A +N+ V + + + + EA
Sbjct: 179 EKDAWEIPRESLKLEKKLGAGQFGEVWMAT---YNKHTKVAVKTMKPGSMSVEAFLAEAN 235
Query: 62 TMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVV--IATILRE 119
M + H ++K H + V+ ++++ FM+ GS L LK+ +G ++ + + +
Sbjct: 236 VMKTLQHDKLVKLH-AVVTKEPIYIITEFMAKGSLLDFLKS--DEGSKQPLPKLIDFSAQ 292
Query: 120 VLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPC 179
+ +G+ ++ +IHRD+++ NIL+ K+ DFG++ + D+ R F P
Sbjct: 293 IAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKF---PI 349
Query: 180 -WMAPEVMEQLHGYDFKADIWSFGITALEL-AHGHAPFSKYPPMK--VLLMTLQNAPPGL 235
W APE + + K+D+WSFGI +E+ +G P YP M ++ L+ G
Sbjct: 350 KWTAPEAI-NFGSFTIKSDVWSFGILLMEIVTYGRIP---YPGMSNPEVIRALER---GY 402
Query: 236 DYERDRKFSKSFKQMIASCLVKDPSKRPS 264
R + ++ C P +RP+
Sbjct: 403 RMPRPENCPEELYNIMMRCWKNRPEERPT 431
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 91/187 (48%), Gaps = 22/187 (11%)
Query: 116 ILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN--- 172
+ R++L+ L Y+H G IHR++K NI ID +K+GDFG++ + S D ++ +
Sbjct: 121 LFRQILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 173 --------TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVL 224
+ +GT ++A EV++ Y+ K D +S GI E + PFS +
Sbjct: 181 PGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIY---PFSTGXERVNI 237
Query: 225 LMTLQNA----PPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSFFKQARSN 280
L L++ PP D D K K K++I + DP+KRP A+ LL + +
Sbjct: 238 LKKLRSVSIEFPPDFD---DNK-XKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPVKHQD 293
Query: 281 EYIARTL 287
E I L
Sbjct: 294 EVIKEAL 300
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 107/228 (46%), Gaps = 14/228 (6%)
Query: 54 SNISREAQTMILVDHPNVLKSHCSFVSD--HNLWVVMPFMSGGSCLHILKAAYPDGFEEV 111
+N+ +E Q + + H NV++ ++ +++VM + G +L + F
Sbjct: 51 ANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGM-QEMLDSVPEKRFPVC 109
Query: 112 VIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACL--FDSGDRQR 169
+++ GL+YLH G +H+D+K GN+L+ G +K+ GV+ L F + D R
Sbjct: 110 QAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCR 169
Query: 170 MRNTFVGTPCWMAPEVMEQLHGYD-FKADIWSFGITALELAHGHAPFSKYPPMKVLLMTL 228
T G+P + PE+ L + FK DIWS G+T + G PF K+
Sbjct: 170 ---TSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKL----F 222
Query: 229 QNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSFFKQ 276
+N G Y ++ L +P+KR S +++ +HS+F++
Sbjct: 223 ENIGKG-SYAIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRK 269
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 109/224 (48%), Gaps = 20/224 (8%)
Query: 56 ISREAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIAT 115
I RE + V H NV+ H + + ++ +++ +SGG L A + E +
Sbjct: 62 IEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL--AQKESLSEEEATS 119
Query: 116 ILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGA----IKLGDFGVSACLFDSGDRQRMR 171
++++L G++YLH H D+K NI++ + IKL DFG++ + D + +
Sbjct: 120 FIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE---FK 176
Query: 172 NTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNA 231
N F GTP ++APE++ +AD+WS G+ L G +PF + TL N
Sbjct: 177 NIF-GTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE----TLANI 230
Query: 232 PPGLDYERDRKF----SKSFKQMIASCLVKDPSKRPSAKKLLKH 271
+ Y+ D +F S+ K I LVK+ KR + ++ L+H
Sbjct: 231 -TSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRH 273
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 118/267 (44%), Gaps = 18/267 (6%)
Query: 6 YPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMIL 65
+ + E L E +G G + V +N V + ++ + EA M
Sbjct: 8 WEVPRETLKLVERLGAGQAGEVWMGY---YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQ 64
Query: 66 VDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVV--IATILREVLKG 123
+ H +++ + + V+ ++++ +M GS + LK P G + + + + ++ +G
Sbjct: 65 LQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEG 121
Query: 124 LDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPC-WMA 182
+ ++ +IHRD+++ NIL+ + K+ DFG++ + D+ R F P W A
Sbjct: 122 MAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKF---PIKWTA 178
Query: 183 PEVMEQLHGYDFKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTLQNAPPGLDYERDR 241
PE + + K+D+WSFGI E+ HG P+ +V +QN G R
Sbjct: 179 PEAI-NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV----IQNLERGYRMVRPD 233
Query: 242 KFSKSFKQMIASCLVKDPSKRPSAKKL 268
+ Q++ C + P RP+ L
Sbjct: 234 NCPEELYQLMRLCWKERPEDRPTFDYL 260
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 109/243 (44%), Gaps = 29/243 (11%)
Query: 39 VAVKILDFERDNSDLSNISREAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLH 98
VA+K L + EA M DHPNV+ + +V+ FM G+
Sbjct: 74 VAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDA 133
Query: 99 ILKAAYPDG-FEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGV 157
L+ DG F + + +LR + G+ YL G++HRD+ + NIL++ K+ DFG+
Sbjct: 134 FLRKH--DGQFTVIQLVGMLRGIAAGMRYLADMGYVHRDLAARNILVNSNLVCKVSDFGL 191
Query: 158 SACLFDSGDRQRMRNTFVG-TPC-WMAPEVMEQLHGYDFKADIWSFGITALE-LAHGHAP 214
S + D D + + T G P W APE + Q + +D+WS+GI E +++G P
Sbjct: 192 SRVIED--DPEAVYTTTGGKIPVRWTAPEAI-QYRKFTSASDVWSYGIVMWEVMSYGERP 248
Query: 215 FSKYPPMKVL--------LMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAK 266
+ V+ L + P GL Q++ C K+ ++RP +
Sbjct: 249 YWDMSNQDVIKAIEEGYRLPAPMDCPAGL------------HQLMLDCWQKERAERPKFE 296
Query: 267 KLL 269
+++
Sbjct: 297 QIV 299
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 105/224 (46%), Gaps = 13/224 (5%)
Query: 59 EAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSC-LHILKAAYPDGFEEVVIATIL 117
E Q + V+ V+ ++ + L +V+ M+GG HI GF E
Sbjct: 234 EKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQA-GFPEARAVFYA 292
Query: 118 REVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGT 177
E+ GL+ LH ++RD+K NIL+D G I++ D G+ A G + R VGT
Sbjct: 293 AEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGL-AVHVPEGQTIKGR---VGT 348
Query: 178 PCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDY 237
+MAPEV++ Y F D W+ G E+ G +PF + K+ ++ +
Sbjct: 349 VGYMAPEVVKN-ERYTFSPDWWALGCLLYEMIAGQSPFQQR-KKKIKREEVERLVKEVPE 406
Query: 238 ERDRKFSKSFKQMIASCLVKDPSKR-----PSAKKLLKHSFFKQ 276
E +FS + + + L KDP++R SA+++ +H FK+
Sbjct: 407 EYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKK 450
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 90/203 (44%), Gaps = 18/203 (8%)
Query: 84 LWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNIL 143
L ++M M GG ++ F E A I+R++ + +LH H HRDVK N+L
Sbjct: 82 LLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLL 141
Query: 144 IDVR---GAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFKADIWS 200
+ +KL DFG F Q T TP ++APEV+ YD D+WS
Sbjct: 142 YTSKEKDAVLKLTDFG-----FAKETTQNALQTPCYTPYYVAPEVLGP-EKYDKSCDMWS 195
Query: 201 FGITALELAHGHAPF------SKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASC 254
G+ L G PF + P MK + Q P ++ + S+ KQ+I
Sbjct: 196 LGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWS---EVSEDAKQLIRLL 252
Query: 255 LVKDPSKRPSAKKLLKHSFFKQA 277
L DP++R + + + H + Q+
Sbjct: 253 LKTDPTERLTITQFMNHPWINQS 275
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 103/238 (43%), Gaps = 15/238 (6%)
Query: 38 IVAVKILDFERDNSDLSNISREAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCL 97
VA+K L + EA M DHPNV+ + ++ FM GS
Sbjct: 37 FVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLD 96
Query: 98 HILKAAYPDG-FEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFG 156
L+ DG F + + +LR + G+ YL ++HR + + NIL++ K+ DFG
Sbjct: 97 SFLRQN--DGQFTVIQLVGMLRGIAAGMKYLADMNYVHRALAARNILVNSNLVCKVSDFG 154
Query: 157 VSACLFDSGDRQRMRNTFVG-TPC-WMAPEVMEQLHGYDFKADIWSFGITALE-LAHGHA 213
+S L D + G P W APE + Q + +D+WS+GI E +++G
Sbjct: 155 LSRFLEDDTSDPTYTSALGGKIPIRWTAPEAI-QYRKFTSASDVWSYGIVMWEVMSYGER 213
Query: 214 PFSKYPPMKVLLMTLQNA--PPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLL 269
P+ V+ Q+ PP +D + Q++ C KD + RP +++
Sbjct: 214 PYWDMTNQDVINAIEQDYRLPPPMD------CPSALHQLMLDCWQKDRNHRPKFGQIV 265
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 90/203 (44%), Gaps = 18/203 (8%)
Query: 84 LWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNIL 143
L ++M M GG ++ F E A I+R++ + +LH H HRDVK N+L
Sbjct: 101 LLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLL 160
Query: 144 IDVR---GAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFKADIWS 200
+ +KL DFG F Q T TP ++APEV+ YD D+WS
Sbjct: 161 YTSKEKDAVLKLTDFG-----FAKETTQNALQTPCYTPYYVAPEVLGP-EKYDKSCDMWS 214
Query: 201 FGITALELAHGHAPF------SKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASC 254
G+ L G PF + P MK + Q P ++ + S+ KQ+I
Sbjct: 215 LGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWS---EVSEDAKQLIRLL 271
Query: 255 LVKDPSKRPSAKKLLKHSFFKQA 277
L DP++R + + + H + Q+
Sbjct: 272 LKTDPTERLTITQFMNHPWINQS 294
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 118/268 (44%), Gaps = 18/268 (6%)
Query: 5 KYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMI 64
++ + E L E +G G V +N V + ++ + EA M
Sbjct: 13 EWEVPRETLKLVERLGAGQFGEVWMGY---YNGHTKVAVKSLKQGSMSPDAFLAEANLMK 69
Query: 65 LVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVV--IATILREVLK 122
+ H +++ + + V+ ++++ +M GS + LK P G + + + + ++ +
Sbjct: 70 QLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAE 126
Query: 123 GLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPC-WM 181
G+ ++ +IHRD+++ NIL+ + K+ DFG++ + D+ R F P W
Sbjct: 127 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF---PIKWT 183
Query: 182 APEVMEQLHGYDFKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTLQNAPPGLDYERD 240
APE + + K+D+WSFGI E+ HG P+ +V +QN G R
Sbjct: 184 APEAI-NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV----IQNLERGYRMVRP 238
Query: 241 RKFSKSFKQMIASCLVKDPSKRPSAKKL 268
+ Q++ C + P RP+ L
Sbjct: 239 DNCPEELYQLMRLCWKERPEDRPTFDYL 266
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 118/268 (44%), Gaps = 18/268 (6%)
Query: 5 KYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMI 64
++ + E L E +G G V +N V + ++ + EA M
Sbjct: 15 EWEVPRETLKLVERLGAGQFGEVWMGY---YNGHTKVAVKSLKQGSMSPDAFLAEANLMK 71
Query: 65 LVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVV--IATILREVLK 122
+ H +++ + + V+ ++++ +M GS + LK P G + + + + ++ +
Sbjct: 72 QLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAE 128
Query: 123 GLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPC-WM 181
G+ ++ +IHRD+++ NIL+ + K+ DFG++ + D+ R F P W
Sbjct: 129 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF---PIKWT 185
Query: 182 APEVMEQLHGYDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLDYERD 240
APE + + K+D+WSFGI E+ HG P+ +V +QN G R
Sbjct: 186 APEAI-NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV----IQNLERGYRMVRP 240
Query: 241 RKFSKSFKQMIASCLVKDPSKRPSAKKL 268
+ Q++ C + P RP+ L
Sbjct: 241 DNCPEELYQLMRLCWKERPEDRPTFDYL 268
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 103/235 (43%), Gaps = 13/235 (5%)
Query: 39 VAVKILDFERDNSDLSNISREAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLH 98
VA+K L + EA M DHPN++ + +V +M GS
Sbjct: 53 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDT 112
Query: 99 ILKAAYPDG-FEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGV 157
LK DG F + + +LR + G+ YL G++HRD+ + NILI+ K+ DFG+
Sbjct: 113 FLKKN--DGQFTVIQLVGMLRGISAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGL 170
Query: 158 SACLFDSGDRQRMRNTFVG-TPC-WMAPEVMEQLHGYDFKADIWSFGITALE-LAHGHAP 214
S L D D + T G P W APE + + +D+WS+GI E +++G P
Sbjct: 171 SRVLED--DPEAAYTTRGGKIPIRWTAPEAI-AFRKFTSASDVWSYGIVMWEVVSYGERP 227
Query: 215 FSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLL 269
+ + V ++ G + Q++ C K+ + RP +++
Sbjct: 228 YWEMTNQDV----IKAVEEGYRLPSPMDCPAALYQLMLDCWQKERNSRPKFDEIV 278
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 122/304 (40%), Gaps = 37/304 (12%)
Query: 8 IGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMIL-- 65
+ Y E+G G +V++A VA+K + L IS + +L
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLP-ISTVREVALLRR 59
Query: 66 ---VDHPNVLKSH---CSFVSDHNLWVVMPFMSGGSCLHI-LKAAYPDGFEEVVIATILR 118
+HPNV++ + +D + V + F L L A P G I ++R
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMR 119
Query: 119 EVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTP 178
+ L+GLD+LH + +HRD+K NIL+ G +KL DFG++ Q V T
Sbjct: 120 QFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIY----SYQMALAPVVVTL 175
Query: 179 CWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVL--LMTLQNAPPGLD 236
+ APEV+ Q Y D+WS G E+ F L + L PP D
Sbjct: 176 WYRAPEVLLQ-STYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDD 234
Query: 237 YERDRKFSK--------------------SFKQMIASCLVKDPSKRPSAKKLLKHSFFKQ 276
+ RD + S Q++ L +P KR SA + L+HS+ +
Sbjct: 235 WPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHK 294
Query: 277 ARSN 280
N
Sbjct: 295 DEGN 298
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 118/268 (44%), Gaps = 18/268 (6%)
Query: 5 KYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMI 64
++ + E L E +G G V +N V + ++ + EA M
Sbjct: 7 EWEVPRETLKLVERLGAGQFGEVWMGY---YNGHTKVAVKSLKQGSMSPDAFLAEANLMK 63
Query: 65 LVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVV--IATILREVLK 122
+ H +++ + + V+ ++++ +M GS + LK P G + + + + ++ +
Sbjct: 64 QLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAE 120
Query: 123 GLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPC-WM 181
G+ ++ +IHRD+++ NIL+ + K+ DFG++ + D+ R F P W
Sbjct: 121 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF---PIKWT 177
Query: 182 APEVMEQLHGYDFKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTLQNAPPGLDYERD 240
APE + + K+D+WSFGI E+ HG P+ +V +QN G R
Sbjct: 178 APEAI-NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV----IQNLERGYRMVRP 232
Query: 241 RKFSKSFKQMIASCLVKDPSKRPSAKKL 268
+ Q++ C + P RP+ L
Sbjct: 233 DNCPEELYQLMRLCWKERPEDRPTFDYL 260
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 118/268 (44%), Gaps = 18/268 (6%)
Query: 5 KYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMI 64
++ + E L E +G G V +N V + ++ + EA M
Sbjct: 16 EWEVPRETLKLVERLGAGQFGEVWMGY---YNGHTKVAVKSLKQGSMSPDAFLAEANLMK 72
Query: 65 LVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVV--IATILREVLK 122
+ H +++ + + V+ ++++ +M GS + LK P G + + + + ++ +
Sbjct: 73 QLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAE 129
Query: 123 GLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPC-WM 181
G+ ++ +IHRD+++ NIL+ + K+ DFG++ + D+ R F P W
Sbjct: 130 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF---PIKWT 186
Query: 182 APEVMEQLHGYDFKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTLQNAPPGLDYERD 240
APE + + K+D+WSFGI E+ HG P+ +V +QN G R
Sbjct: 187 APEAI-NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV----IQNLERGYRMVRP 241
Query: 241 RKFSKSFKQMIASCLVKDPSKRPSAKKL 268
+ Q++ C + P RP+ L
Sbjct: 242 DNCPEELYQLMRLCWKERPEDRPTFDYL 269
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 105/236 (44%), Gaps = 15/236 (6%)
Query: 39 VAVKILDFERDNSDLSNISREAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLH 98
VA+K L + EA M DHPN+++ + +V M GS
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDS 135
Query: 99 ILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVS 158
L+ + F + + +LR + G+ YL G +HRD+ + NILI+ K+ DFG+S
Sbjct: 136 FLRK-HDAQFTVIQLVGMLRGIASGMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLS 194
Query: 159 ACLFDSGDRQRMRNTFVG-TPC-WMAPEVMEQLHGYDFKADIWSFGITALE-LAHGHAPF 215
L D D + T G P W +PE + + +D+WS+GI E +++G P+
Sbjct: 195 RVLED--DPEAAYTTRGGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVMSYGERPY 251
Query: 216 SKYPPMKVLLMTLQNA--PPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLL 269
+ V+ + PP +D + Q++ C KD + RP ++++
Sbjct: 252 WEMSNQDVIKAVDEGYRLPPPMD------CPAALYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 118/268 (44%), Gaps = 18/268 (6%)
Query: 5 KYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMI 64
++ + E L E +G G V +N V + ++ + EA M
Sbjct: 9 EWEVPRETLKLVERLGAGQFGEVWMGY---YNGHTKVAVKSLKQGSMSPDAFLAEANLMK 65
Query: 65 LVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVV--IATILREVLK 122
+ H +++ + + V+ ++++ +M GS + LK P G + + + + ++ +
Sbjct: 66 QLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAE 122
Query: 123 GLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPC-WM 181
G+ ++ +IHRD+++ NIL+ + K+ DFG++ + D+ R F P W
Sbjct: 123 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF---PIKWT 179
Query: 182 APEVMEQLHGYDFKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTLQNAPPGLDYERD 240
APE + + K+D+WSFGI E+ HG P+ +V +QN G R
Sbjct: 180 APEAI-NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV----IQNLERGYRMVRP 234
Query: 241 RKFSKSFKQMIASCLVKDPSKRPSAKKL 268
+ Q++ C + P RP+ L
Sbjct: 235 DNCPEELYQLMRLCWKERPEDRPTFDYL 262
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 122/304 (40%), Gaps = 37/304 (12%)
Query: 8 IGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMIL-- 65
+ Y E+G G +V++A VA+K + L IS + +L
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLP-ISTVREVALLRR 59
Query: 66 ---VDHPNVLKSH---CSFVSDHNLWVVMPFMSGGSCLHI-LKAAYPDGFEEVVIATILR 118
+HPNV++ + +D + V + F L L A P G I ++R
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMR 119
Query: 119 EVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTP 178
+ L+GLD+LH + +HRD+K NIL+ G +KL DFG++ Q V T
Sbjct: 120 QFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIY----SYQMALFPVVVTL 175
Query: 179 CWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVL--LMTLQNAPPGLD 236
+ APEV+ Q Y D+WS G E+ F L + L PP D
Sbjct: 176 WYRAPEVLLQ-STYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDD 234
Query: 237 YERDRKFSK--------------------SFKQMIASCLVKDPSKRPSAKKLLKHSFFKQ 276
+ RD + S Q++ L +P KR SA + L+HS+ +
Sbjct: 235 WPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHK 294
Query: 277 ARSN 280
N
Sbjct: 295 DEGN 298
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 126/310 (40%), Gaps = 41/310 (13%)
Query: 7 PIGAEHYTLYE---EVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSN--ISREAQ 61
P+G+ + YE E+G G +V++A VA+K + IS +
Sbjct: 2 PLGSMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVRE 61
Query: 62 TMIL-----VDHPNVLKSH---CSFVSDHNLWVVMPFMSGGSCLHI-LKAAYPDGFEEVV 112
+L +HPNV++ + +D + V + F L L A P G
Sbjct: 62 VALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAET 121
Query: 113 IATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN 172
I ++R+ L+GLD+LH + +HRD+K NIL+ G +KL DFG++ Q
Sbjct: 122 IKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIY----SYQMALT 177
Query: 173 TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVL--LMTLQN 230
V T + APEV+ Q Y D+WS G E+ F L + L
Sbjct: 178 PVVVTLWYRAPEVLLQ-STYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIG 236
Query: 231 APPGLDYERDRKFSK--------------------SFKQMIASCLVKDPSKRPSAKKLLK 270
PP D+ RD + S Q++ L +P KR SA + L+
Sbjct: 237 LPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296
Query: 271 HSFFKQARSN 280
HS+ + N
Sbjct: 297 HSYLHKDEGN 306
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 130/303 (42%), Gaps = 34/303 (11%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNIS-REAQTMILVDHP 69
E Y ++G+G V + +IVA+K D+ + I+ RE + + + HP
Sbjct: 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHP 62
Query: 70 NVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHH 129
N++ F L +V + + LH L Y G E ++ +I + L+ +++ H
Sbjct: 63 NLVNLLEVFRRKRRLHLVFEYCDH-TVLHELDR-YQRGVPEHLVKSITWQTLQAVNFCHK 120
Query: 130 HGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQL 189
H IHRDVK NILI IKL DFG + L D + V T + +PE++
Sbjct: 121 HNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSD---YYDDEVATRWYRSPELLVGD 177
Query: 190 HGYDFKADIWSFGITALELAHGHAPF----SKYPPMKVLLMTLQNAPPGLD--YERDRKF 243
Y D+W+ G EL G P S + ++ TL + P + ++ F
Sbjct: 178 TQYGPPVDVWAIGCVFAELLSG-VPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYF 236
Query: 244 SK-------------------SFKQ--MIASCLVKDPSKRPSAKKLLKHSFFKQARSNEY 282
S S+ ++ CL DP++R + ++LL H +F+ R E
Sbjct: 237 SGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENIREIED 296
Query: 283 IAR 285
+A+
Sbjct: 297 LAK 299
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 118/268 (44%), Gaps = 18/268 (6%)
Query: 5 KYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMI 64
++ + E L E +G G V +N V + ++ + EA M
Sbjct: 8 EWEVPRETLKLVERLGAGQFGEVWMGY---YNGHTKVAVKSLKQGSMSPDAFLAEANLMK 64
Query: 65 LVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVV--IATILREVLK 122
+ H +++ + + V+ ++++ +M GS + LK P G + + + + ++ +
Sbjct: 65 QLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAE 121
Query: 123 GLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPC-WM 181
G+ ++ +IHRD+++ NIL+ + K+ DFG++ + D+ R F P W
Sbjct: 122 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF---PIKWT 178
Query: 182 APEVMEQLHGYDFKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTLQNAPPGLDYERD 240
APE + + K+D+WSFGI E+ HG P+ +V +QN G R
Sbjct: 179 APEAI-NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV----IQNLERGYRMVRP 233
Query: 241 RKFSKSFKQMIASCLVKDPSKRPSAKKL 268
+ Q++ C + P RP+ L
Sbjct: 234 DNCPEELYQLMRLCWKERPEDRPTFDYL 261
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 124/279 (44%), Gaps = 33/279 (11%)
Query: 10 AEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFER-------DNSDLSNISREAQT 62
++ Y+ +G G V A+ N+ V VK + E+ ++ L ++ E
Sbjct: 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAI 82
Query: 63 MILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLK 122
+ V+H N++K F + +VM G L +P +E + + I R+++
Sbjct: 83 LSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPR-LDEPLASYIFRQLVS 141
Query: 123 GLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMA 182
+ YL IHRD+K NI+I IKL DFG +A L +R ++ TF GT + A
Sbjct: 142 AVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYL----ERGKLFYTFCGTIEYCA 197
Query: 183 PEVMEQLHGYDFKA---DIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNA--PPGLDY 237
PEV L G ++ ++WS G+T L PF + L T++ A PP L
Sbjct: 198 PEV---LMGNPYRGPELEMWSLGVTLYTLVFEENPFCE------LEETVEAAIHPPYL-- 246
Query: 238 ERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSFFKQ 276
SK +++ L P +R + +KL+ + Q
Sbjct: 247 -----VSKELMSLVSGLLQPVPERRTTLEKLVTDPWVTQ 280
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 118/268 (44%), Gaps = 18/268 (6%)
Query: 5 KYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMI 64
++ + E L E +G G V +N V + ++ + EA M
Sbjct: 13 EWEVPRETLKLVERLGAGQFGEVWMGY---YNGHTKVAVKSLKQGSMSPDAFLAEANLMK 69
Query: 65 LVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVV--IATILREVLK 122
+ H +++ + + V+ ++++ +M GS + LK P G + + + + ++ +
Sbjct: 70 QLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAE 126
Query: 123 GLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPC-WM 181
G+ ++ +IHRD+++ NIL+ + K+ DFG++ + D+ R F P W
Sbjct: 127 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF---PIKWT 183
Query: 182 APEVMEQLHGYDFKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTLQNAPPGLDYERD 240
APE + + K+D+WSFGI E+ HG P+ +V +QN G R
Sbjct: 184 APEAI-NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV----IQNLERGYRMVRP 238
Query: 241 RKFSKSFKQMIASCLVKDPSKRPSAKKL 268
+ Q++ C + P RP+ L
Sbjct: 239 DNCPEELYQLMRLCWKERPEDRPTFDYL 266
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 118/268 (44%), Gaps = 18/268 (6%)
Query: 5 KYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMI 64
++ + E L E +G G V +N V + ++ + EA M
Sbjct: 17 EWEVPRETLKLVERLGAGQFGEVWMGY---YNGHTKVAVKSLKQGSMSPDAFLAEANLMK 73
Query: 65 LVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVV--IATILREVLK 122
+ H +++ + + V+ ++++ +M GS + LK P G + + + + ++ +
Sbjct: 74 QLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAE 130
Query: 123 GLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPC-WM 181
G+ ++ +IHRD+++ NIL+ + K+ DFG++ + D+ R F P W
Sbjct: 131 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF---PIKWT 187
Query: 182 APEVMEQLHGYDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLDYERD 240
APE + + K+D+WSFGI E+ HG P+ +V +QN G R
Sbjct: 188 APEAI-NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV----IQNLERGYRMVRP 242
Query: 241 RKFSKSFKQMIASCLVKDPSKRPSAKKL 268
+ Q++ C + P RP+ L
Sbjct: 243 DNCPEELYQLMRLCWKERPEDRPTFDYL 270
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 118/268 (44%), Gaps = 18/268 (6%)
Query: 5 KYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMI 64
++ + E L E +G G V +N V + ++ + EA M
Sbjct: 12 EWEVPRETLKLVERLGAGQFGEVWMGY---YNGHTKVAVKSLKQGSMSPDAFLAEANLMK 68
Query: 65 LVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVV--IATILREVLK 122
+ H +++ + + V+ ++++ +M GS + LK P G + + + + ++ +
Sbjct: 69 QLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAE 125
Query: 123 GLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPC-WM 181
G+ ++ +IHRD+++ NIL+ + K+ DFG++ + D+ R F P W
Sbjct: 126 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF---PIKWT 182
Query: 182 APEVMEQLHGYDFKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTLQNAPPGLDYERD 240
APE + + K+D+WSFGI E+ HG P+ +V +QN G R
Sbjct: 183 APEAI-NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV----IQNLERGYRMVRP 237
Query: 241 RKFSKSFKQMIASCLVKDPSKRPSAKKL 268
+ Q++ C + P RP+ L
Sbjct: 238 DNCPEELYQLMRLCWKERPEDRPTFDYL 265
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 118/268 (44%), Gaps = 18/268 (6%)
Query: 5 KYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMI 64
++ + E L E +G G V +N V + ++ + EA M
Sbjct: 7 EWEVPRETLKLVERLGAGQFGEVWMGY---YNGHTKVAVKSLKQGSMSPDAFLAEANLMK 63
Query: 65 LVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVV--IATILREVLK 122
+ H +++ + + V+ ++++ +M GS + LK P G + + + + ++ +
Sbjct: 64 QLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAE 120
Query: 123 GLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPC-WM 181
G+ ++ +IHRD+++ NIL+ + K+ DFG++ + D+ R F P W
Sbjct: 121 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF---PIKWT 177
Query: 182 APEVMEQLHGYDFKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTLQNAPPGLDYERD 240
APE + + K+D+WSFGI E+ HG P+ +V +QN G R
Sbjct: 178 APEAI-NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV----IQNLERGYRMVRP 232
Query: 241 RKFSKSFKQMIASCLVKDPSKRPSAKKL 268
+ Q++ C + P RP+ L
Sbjct: 233 DNCPEELYQLMRLCWKERPEDRPTFDYL 260
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 120/266 (45%), Gaps = 14/266 (5%)
Query: 12 HYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFE-RDNSDL-SNISREAQTMILVDHP 69
+Y + + +G+G V A + VA+KI++ + SD+ I RE + L+ HP
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 74
Query: 70 NVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHH 129
+++K + S + +V+ + +I++ D E ++++ ++Y H
Sbjct: 75 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQR---DKMSEQEARRFFQQIISAVEYCHR 131
Query: 130 HGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQL 189
H +HRD+K N+L+D +K+ DFG+S + D T G+P + APEV+
Sbjct: 132 HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN----FLKTSCGSPNYAAPEVISGK 187
Query: 190 HGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQ 249
+ D+WS G+ + PF + VL + N Y + S
Sbjct: 188 LYAGPEVDVWSCGVILYVMLCRRLPFDD-ESIPVLFKNISNGV----YTLPKFLSPGAAG 242
Query: 250 MIASCLVKDPSKRPSAKKLLKHSFFK 275
+I L+ +P R S ++++ +FK
Sbjct: 243 LIKRMLIVNPLNRISIHEIMQDDWFK 268
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 118/268 (44%), Gaps = 18/268 (6%)
Query: 5 KYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMI 64
++ + E L E +G G V +N V + ++ + EA M
Sbjct: 2 EWEVPRETLKLVERLGAGQFGEVWMGY---YNGHTKVAVKSLKQGSMSPDAFLAEANLMK 58
Query: 65 LVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVV--IATILREVLK 122
+ H +++ + + V+ ++++ +M GS + LK P G + + + + ++ +
Sbjct: 59 QLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAE 115
Query: 123 GLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPC-WM 181
G+ ++ +IHRD+++ NIL+ + K+ DFG++ + D+ R F P W
Sbjct: 116 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF---PIKWT 172
Query: 182 APEVMEQLHGYDFKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTLQNAPPGLDYERD 240
APE + + K+D+WSFGI E+ HG P+ +V +QN G R
Sbjct: 173 APEAI-NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV----IQNLERGYRMVRP 227
Query: 241 RKFSKSFKQMIASCLVKDPSKRPSAKKL 268
+ Q++ C + P RP+ L
Sbjct: 228 DNCPEELYQLMRLCWKERPEDRPTFDYL 255
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 99/210 (47%), Gaps = 20/210 (9%)
Query: 77 SFVSDHNLWVVMPFMSGGSCLHILKAAYPD--GFEEVVIATILREVLKGLDYLHHHGHIH 134
+F + +L +VM M+GG + + D GF+E +++ GL++LH I+
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIY 312
Query: 135 RDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDF 194
RD+K N+L+D G +++ D G++ L +G Q + GTP +MAPE++ YDF
Sbjct: 313 RDLKPENVLLDDDGNVRISDLGLAVEL-KAG--QTKTKGYAGTPGFMAPELLLG-EEYDF 368
Query: 195 KADIWSFGITALELAHGHAPF----SKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQM 250
D ++ G+T E+ PF K ++ L+ A D KFS + K
Sbjct: 369 SVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPD-----KFSPASKDF 423
Query: 251 IASCLVKDPSKR-----PSAKKLLKHSFFK 275
+ L KDP KR S L H F+
Sbjct: 424 CEALLQKDPEKRLGFRDGSCDGLRTHPLFR 453
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 99/210 (47%), Gaps = 20/210 (9%)
Query: 77 SFVSDHNLWVVMPFMSGGSCLHILKAAYPD--GFEEVVIATILREVLKGLDYLHHHGHIH 134
+F + +L +VM M+GG + + D GF+E +++ GL++LH I+
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIY 312
Query: 135 RDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDF 194
RD+K N+L+D G +++ D G++ L +G Q + GTP +MAPE++ YDF
Sbjct: 313 RDLKPENVLLDDDGNVRISDLGLAVEL-KAG--QTKTKGYAGTPGFMAPELLLG-EEYDF 368
Query: 195 KADIWSFGITALELAHGHAPF----SKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQM 250
D ++ G+T E+ PF K ++ L+ A D KFS + K
Sbjct: 369 SVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPD-----KFSPASKDF 423
Query: 251 IASCLVKDPSKR-----PSAKKLLKHSFFK 275
+ L KDP KR S L H F+
Sbjct: 424 CEALLQKDPEKRLGFRDGSCDGLRTHPLFR 453
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 99/210 (47%), Gaps = 20/210 (9%)
Query: 77 SFVSDHNLWVVMPFMSGGSCLHILKAAYPD--GFEEVVIATILREVLKGLDYLHHHGHIH 134
+F + +L +VM M+GG + + D GF+E +++ GL++LH I+
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIY 312
Query: 135 RDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDF 194
RD+K N+L+D G +++ D G++ L +G Q + GTP +MAPE++ YDF
Sbjct: 313 RDLKPENVLLDDDGNVRISDLGLAVEL-KAG--QTKTKGYAGTPGFMAPELLLG-EEYDF 368
Query: 195 KADIWSFGITALELAHGHAPF----SKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQM 250
D ++ G+T E+ PF K ++ L+ A D KFS + K
Sbjct: 369 SVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPD-----KFSPASKDF 423
Query: 251 IASCLVKDPSKR-----PSAKKLLKHSFFK 275
+ L KDP KR S L H F+
Sbjct: 424 CEALLQKDPEKRLGFRDGSCDGLRTHPLFR 453
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 99/210 (47%), Gaps = 20/210 (9%)
Query: 77 SFVSDHNLWVVMPFMSGGSCLHILKAAYPD--GFEEVVIATILREVLKGLDYLHHHGHIH 134
+F + +L +VM M+GG + + D GF+E +++ GL++LH I+
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIY 312
Query: 135 RDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDF 194
RD+K N+L+D G +++ D G++ L +G Q + GTP +MAPE++ YDF
Sbjct: 313 RDLKPENVLLDDDGNVRISDLGLAVEL-KAG--QTKTKGYAGTPGFMAPELLLG-EEYDF 368
Query: 195 KADIWSFGITALELAHGHAPF----SKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQM 250
D ++ G+T E+ PF K ++ L+ A D KFS + K
Sbjct: 369 SVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPD-----KFSPASKDF 423
Query: 251 IASCLVKDPSKR-----PSAKKLLKHSFFK 275
+ L KDP KR S L H F+
Sbjct: 424 CEALLQKDPEKRLGFRDGSCDGLRTHPLFR 453
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 120/266 (45%), Gaps = 14/266 (5%)
Query: 12 HYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFE-RDNSDL-SNISREAQTMILVDHP 69
+Y + + +G+G V A + VA+KI++ + SD+ I RE + L+ HP
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 73
Query: 70 NVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHH 129
+++K + S + +V+ + +I++ D E ++++ ++Y H
Sbjct: 74 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQR---DKMSEQEARRFFQQIISAVEYCHR 130
Query: 130 HGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQL 189
H +HRD+K N+L+D +K+ DFG+S + D T G+P + APEV+
Sbjct: 131 HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN----FLKTSCGSPNYAAPEVISGK 186
Query: 190 HGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQ 249
+ D+WS G+ + PF + VL + N Y + S
Sbjct: 187 LYAGPEVDVWSCGVILYVMLCRRLPFDD-ESIPVLFKNISNGV----YTLPKFLSPGAAG 241
Query: 250 MIASCLVKDPSKRPSAKKLLKHSFFK 275
+I L+ +P R S ++++ +FK
Sbjct: 242 LIKRMLIVNPLNRISIHEIMQDDWFK 267
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 120/266 (45%), Gaps = 14/266 (5%)
Query: 12 HYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFE-RDNSDL-SNISREAQTMILVDHP 69
+Y + + +G+G V A + VA+KI++ + SD+ I RE + L+ HP
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 64
Query: 70 NVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHH 129
+++K + S + +V+ + +I++ D E ++++ ++Y H
Sbjct: 65 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQR---DKMSEQEARRFFQQIISAVEYCHR 121
Query: 130 HGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQL 189
H +HRD+K N+L+D +K+ DFG+S + D T G+P + APEV+
Sbjct: 122 HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN----FLKTSCGSPNYAAPEVISGK 177
Query: 190 HGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQ 249
+ D+WS G+ + PF + VL + N Y + S
Sbjct: 178 LYAGPEVDVWSCGVILYVMLCRRLPFDD-ESIPVLFKNISNGV----YTLPKFLSPGAAG 232
Query: 250 MIASCLVKDPSKRPSAKKLLKHSFFK 275
+I L+ +P R S ++++ +FK
Sbjct: 233 LIKRMLIVNPLNRISIHEIMQDDWFK 258
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 120/266 (45%), Gaps = 14/266 (5%)
Query: 12 HYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFE-RDNSDL-SNISREAQTMILVDHP 69
+Y + + +G+G V A + VA+KI++ + SD+ I RE + L+ HP
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 68
Query: 70 NVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHH 129
+++K + S + +V+ + +I++ D E ++++ ++Y H
Sbjct: 69 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQR---DKMSEQEARRFFQQIISAVEYCHR 125
Query: 130 HGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQL 189
H +HRD+K N+L+D +K+ DFG+S + D T G+P + APEV+
Sbjct: 126 HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN----FLKTSCGSPNYAAPEVISGK 181
Query: 190 HGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQ 249
+ D+WS G+ + PF + VL + N Y + S
Sbjct: 182 LYAGPEVDVWSCGVILYVMLCRRLPFDD-ESIPVLFKNISNGV----YTLPKFLSPGAAG 236
Query: 250 MIASCLVKDPSKRPSAKKLLKHSFFK 275
+I L+ +P R S ++++ +FK
Sbjct: 237 LIKRMLIVNPLNRISIHEIMQDDWFK 262
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 118/268 (44%), Gaps = 18/268 (6%)
Query: 5 KYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMI 64
++ + E L E +G G V +N V + ++ + EA M
Sbjct: 7 EWEVPRETLKLVERLGAGQFGEVWMGY---YNGHTKVAVKSLKQGSMSPDAFLAEANLMK 63
Query: 65 LVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVV--IATILREVLK 122
+ H +++ + + V+ ++++ +M GS + LK P G + + + + ++ +
Sbjct: 64 QLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAE 120
Query: 123 GLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPC-WM 181
G+ ++ +IHRD+++ NIL+ + K+ DFG++ + D+ R F P W
Sbjct: 121 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF---PIKWT 177
Query: 182 APEVMEQLHGYDFKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTLQNAPPGLDYERD 240
APE + + K+D+WSFGI E+ HG P+ +V +QN G R
Sbjct: 178 APEAI-NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV----IQNLERGYRMVRP 232
Query: 241 RKFSKSFKQMIASCLVKDPSKRPSAKKL 268
+ Q++ C + P RP+ L
Sbjct: 233 DNCPEELYQLMRLCWKERPEDRPTFDYL 260
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 106/213 (49%), Gaps = 11/213 (5%)
Query: 59 EAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILR 118
EA+ M+ + H +++ + ++++ +M+ G L+ L+ F+ + + +
Sbjct: 69 EAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREM-RHRFQTQQLLEMCK 127
Query: 119 EVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTP 178
+V + ++YL +HRD+ + N L++ +G +K+ DFG+S + D + + + F P
Sbjct: 128 DVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKF---P 184
Query: 179 C-WMAPEVMEQLHGYDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLD 236
W PEV+ + K+DIW+FG+ E+ + G P+ ++ + T ++ GL
Sbjct: 185 VRWSPPEVL-MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE----TAEHIAQGLR 239
Query: 237 YERDRKFSKSFKQMIASCLVKDPSKRPSAKKLL 269
R S+ ++ SC + +RP+ K LL
Sbjct: 240 LYRPHLASEKVYTIMYSCWHEKADERPTFKILL 272
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 123/285 (43%), Gaps = 24/285 (8%)
Query: 1 MDKKKYPIGAEHYTLYEEVGQGVSASVHRALCIPF-----NEIVAVKILDFERDNSDLSN 55
MD I + L E+G+G V A C +VAVK L DN+ +
Sbjct: 3 MDTFVQHIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNAR-KD 61
Query: 56 ISREAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDG-------- 107
REA+ + + H +++K + V L +V +M G L+A PD
Sbjct: 62 FHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNP 121
Query: 108 ---FEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDS 164
+ + I +++ G+ YL +HRD+ + N L+ +K+GDFG+S ++ S
Sbjct: 122 PTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVY-S 180
Query: 165 GDRQRMRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALEL-AHGHAPFSKYPPMKV 223
D R+ + WM PE + + ++D+WS G+ E+ +G P+ + +V
Sbjct: 181 TDYYRVGGHTMLPIRWMPPESI-MYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEV 239
Query: 224 LLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKL 268
+ Q G +R R + +++ C ++P R + K +
Sbjct: 240 IECITQ----GRVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGI 280
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 121/272 (44%), Gaps = 26/272 (9%)
Query: 14 TLYEEVGQGVSASVHRALC---IPFNE--IVAVKILDFERDNSDLSNISREAQTMILVDH 68
L E+G+G V A C +P + +VAVK L E S + REA+ + ++ H
Sbjct: 44 VLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALK-EASESARQDFQREAELLTMLQH 102
Query: 69 PNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPD-----GFEEVV--------IAT 115
++++ L +V +M G L++ PD G E+V +
Sbjct: 103 QHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLA 162
Query: 116 ILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFV 175
+ +V G+ YL +HRD+ + N L+ +K+GDFG+S ++ S D R+ +
Sbjct: 163 VASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIY-STDYYRVGGRTM 221
Query: 176 GTPCWMAPEVMEQLHGYDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPG 234
WM PE + + ++D+WSFG+ E+ +G P+ + + + Q G
Sbjct: 222 LPIRWMPPESI-LYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQ----G 276
Query: 235 LDYERDRKFSKSFKQMIASCLVKDPSKRPSAK 266
+ ER R ++ C ++P +R S K
Sbjct: 277 RELERPRACPPEVYAIMRGCWQREPQQRHSIK 308
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 128/307 (41%), Gaps = 38/307 (12%)
Query: 1 MDKKKYPIGAEHYTLYEEVGQGVSASVHRALCIP-FNEIVAVKILDFE--RDNSDLSNIS 57
M+K + Y E+G+G V +A + VA+K + + + LS I
Sbjct: 1 MEKDGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIR 60
Query: 58 REA--QTMILVDHPNVLKSH--CSFVS---DHNLWVVMPFMSGGSCLHILKAAYPDGFEE 110
A + + +HPNV++ C+ + L +V + ++ K P G
Sbjct: 61 EVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEP-GVPT 119
Query: 111 VVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRM 170
I ++ ++L+GLD+LH H +HRD+K NIL+ G IKL DFG++ Q
Sbjct: 120 ETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIY----SFQMA 175
Query: 171 RNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVL--LMTL 228
+ V T + APEV+ Q Y D+WS G E+ F + L ++ +
Sbjct: 176 LTSVVVTLWYRAPEVLLQ-SSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDV 234
Query: 229 QNAPPGLDYERD----------------RKFSKSF----KQMIASCLVKDPSKRPSAKKL 268
P D+ RD KF K ++ CL +P+KR SA
Sbjct: 235 IGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSA 294
Query: 269 LKHSFFK 275
L H +F+
Sbjct: 295 LSHPYFQ 301
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 121/272 (44%), Gaps = 26/272 (9%)
Query: 14 TLYEEVGQGVSASVHRALC---IPFNE--IVAVKILDFERDNSDLSNISREAQTMILVDH 68
L E+G+G V A C +P + +VAVK L E S + REA+ + ++ H
Sbjct: 15 VLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALK-EASESARQDFQREAELLTMLQH 73
Query: 69 PNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPD-----GFEEVV--------IAT 115
++++ L +V +M G L++ PD G E+V +
Sbjct: 74 QHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLA 133
Query: 116 ILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFV 175
+ +V G+ YL +HRD+ + N L+ +K+GDFG+S ++ S D R+ +
Sbjct: 134 VASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIY-STDYYRVGGRTM 192
Query: 176 GTPCWMAPEVMEQLHGYDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPG 234
WM PE + + ++D+WSFG+ E+ +G P+ + + + Q G
Sbjct: 193 LPIRWMPPESI-LYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQ----G 247
Query: 235 LDYERDRKFSKSFKQMIASCLVKDPSKRPSAK 266
+ ER R ++ C ++P +R S K
Sbjct: 248 RELERPRACPPEVYAIMRGCWQREPQQRHSIK 279
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 120/268 (44%), Gaps = 23/268 (8%)
Query: 8 IGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVD 67
IG H+ + G+ + + +R C A+K L + + RE M ++
Sbjct: 29 IGKGHFGVVYH-GEYIDQAQNRIQC-------AIKSLSRITEMQQVEAFLREGLLMRGLN 80
Query: 68 HPNVLKSHCSFVSDHNL-WVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDY 126
HPNVL + L V++P+M G L +++ + + +I+ L +V +G++Y
Sbjct: 81 HPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGL-QVARGMEY 139
Query: 127 LHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPC-WMAPEV 185
L +HRD+ + N ++D +K+ DFG++ + D ++ P W A
Sbjct: 140 LAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTA--- 196
Query: 186 MEQLHGYDF--KADIWSFGITALE-LAHGHAPFSKYPPMKVLLMTLQNAP-PGLDYERDR 241
+E L Y F K+D+WSFG+ E L G P+ P + Q P +Y D
Sbjct: 197 LESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLPQPEYCPD- 255
Query: 242 KFSKSFKQMIASCLVKDPSKRPSAKKLL 269
S Q++ C DP+ RP+ + L+
Sbjct: 256 ----SLYQVMQQCWEADPAVRPTFRVLV 279
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 121/272 (44%), Gaps = 26/272 (9%)
Query: 14 TLYEEVGQGVSASVHRALC---IPFNE--IVAVKILDFERDNSDLSNISREAQTMILVDH 68
L E+G+G V A C +P + +VAVK L E S + REA+ + ++ H
Sbjct: 21 VLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALK-EASESARQDFQREAELLTMLQH 79
Query: 69 PNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPD-----GFEEVV--------IAT 115
++++ L +V +M G L++ PD G E+V +
Sbjct: 80 QHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLA 139
Query: 116 ILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFV 175
+ +V G+ YL +HRD+ + N L+ +K+GDFG+S ++ S D R+ +
Sbjct: 140 VASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIY-STDYYRVGGRTM 198
Query: 176 GTPCWMAPEVMEQLHGYDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPG 234
WM PE + + ++D+WSFG+ E+ +G P+ + + + Q G
Sbjct: 199 LPIRWMPPESI-LYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQ----G 253
Query: 235 LDYERDRKFSKSFKQMIASCLVKDPSKRPSAK 266
+ ER R ++ C ++P +R S K
Sbjct: 254 RELERPRACPPEVYAIMRGCWQREPQQRHSIK 285
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 97/213 (45%), Gaps = 15/213 (7%)
Query: 13 YTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPNVL 72
+ + E +G G V R + E VA+K E + E Q M ++HPNV+
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 76
Query: 73 KSH-----CSFVSDHNL-WVVMPFMSGGSCLHIL-KAAYPDGFEEVVIATILREVLKGLD 125
+ ++ ++L + M + GG L + G +E I T+L ++ L
Sbjct: 77 SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALR 136
Query: 126 YLHHHGHIHRDVKSGNILID---VRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMA 182
YLH + IHRD+K NI++ R K+ D G + L D+ + FVGT ++A
Sbjct: 137 YLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL----DQGELCTEFVGTLQYLA 192
Query: 183 PEVMEQLHGYDFKADIWSFGITALELAHGHAPF 215
PE++EQ Y D WSFG A E G PF
Sbjct: 193 PELLEQ-KKYTVTVDYWSFGTLAFECITGFRPF 224
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 97/213 (45%), Gaps = 15/213 (7%)
Query: 13 YTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPNVL 72
+ + E +G G V R + E VA+K E + E Q M ++HPNV+
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 75
Query: 73 KSH-----CSFVSDHNL-WVVMPFMSGGSCLHIL-KAAYPDGFEEVVIATILREVLKGLD 125
+ ++ ++L + M + GG L + G +E I T+L ++ L
Sbjct: 76 SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALR 135
Query: 126 YLHHHGHIHRDVKSGNILID---VRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMA 182
YLH + IHRD+K NI++ R K+ D G + L D+ + FVGT ++A
Sbjct: 136 YLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL----DQGELCTEFVGTLQYLA 191
Query: 183 PEVMEQLHGYDFKADIWSFGITALELAHGHAPF 215
PE++EQ Y D WSFG A E G PF
Sbjct: 192 PELLEQ-KKYTVTVDYWSFGTLAFECITGFRPF 223
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 100/219 (45%), Gaps = 15/219 (6%)
Query: 2 DKKKYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQ 61
DK + I E L + +G G V +N V + + + EA
Sbjct: 4 DKDAWEIPRESIKLVKRLGAGQFGEVWMGY---YNNSTKVAVKTLKPGTMSVQAFLEEAN 60
Query: 62 TMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATIL---R 118
M + H +++ + + ++++ +M+ GS L LK+ D +V++ ++
Sbjct: 61 LMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKS---DEGGKVLLPKLIDFSA 117
Query: 119 EVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTP 178
++ +G+ Y+ +IHRD+++ N+L+ K+ DFG++ + D+ R F P
Sbjct: 118 QIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKF---P 174
Query: 179 C-WMAPEVMEQLHGYDFKADIWSFGITALELA-HGHAPF 215
W APE + + K+D+WSFGI E+ +G P+
Sbjct: 175 IKWTAPEAI-NFGCFTIKSDVWSFGILLYEIVTYGKIPY 212
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 105/213 (49%), Gaps = 11/213 (5%)
Query: 59 EAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILR 118
EA+ M+ + H +++ + ++++ +M+ G L+ L+ F+ + + +
Sbjct: 49 EAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREM-RHRFQTQQLLEMCK 107
Query: 119 EVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTP 178
+V + ++YL +HRD+ + N L++ +G +K+ DFG+S + D + + F P
Sbjct: 108 DVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKF---P 164
Query: 179 C-WMAPEVMEQLHGYDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLD 236
W PEV+ + K+DIW+FG+ E+ + G P+ ++ + T ++ GL
Sbjct: 165 VRWSPPEVL-MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE----TAEHIAQGLR 219
Query: 237 YERDRKFSKSFKQMIASCLVKDPSKRPSAKKLL 269
R S+ ++ SC + +RP+ K LL
Sbjct: 220 LYRPHLASEKVYTIMYSCWHEKADERPTFKILL 252
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 118/268 (44%), Gaps = 18/268 (6%)
Query: 5 KYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMI 64
++ + E L E +G G V +N V + ++ + EA M
Sbjct: 3 EWEVPRETLKLVERLGAGQFGEVWMGY---YNGHTKVAVKSLKQGSMSPDAFLAEANLMK 59
Query: 65 LVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVV--IATILREVLK 122
+ H +++ + + V+ ++++ +M GS + LK P G + + + + ++ +
Sbjct: 60 QLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAE 116
Query: 123 GLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPC-WM 181
G+ ++ +IHR++++ NIL+ + K+ DFG++ + D+ R F P W
Sbjct: 117 GMAFIEERNYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF---PIKWT 173
Query: 182 APEVMEQLHGYDFKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTLQNAPPGLDYERD 240
APE + + K+D+WSFGI E+ HG P+ +V +QN G R
Sbjct: 174 APEAI-NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV----IQNLERGYRMVRP 228
Query: 241 RKFSKSFKQMIASCLVKDPSKRPSAKKL 268
+ Q++ C + P RP+ L
Sbjct: 229 DNCPEELYQLMRLCWKERPEDRPTFDYL 256
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 128/307 (41%), Gaps = 38/307 (12%)
Query: 1 MDKKKYPIGAEHYTLYEEVGQGVSASVHRALCIP-FNEIVAVKILDFE--RDNSDLSNIS 57
M+K + Y E+G+G V +A + VA+K + + + LS I
Sbjct: 1 MEKDGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIR 60
Query: 58 REA--QTMILVDHPNVLKSH--CSFVS---DHNLWVVMPFMSGGSCLHILKAAYPDGFEE 110
A + + +HPNV++ C+ + L +V + ++ K P G
Sbjct: 61 EVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEP-GVPT 119
Query: 111 VVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRM 170
I ++ ++L+GLD+LH H +HRD+K NIL+ G IKL DFG++ Q
Sbjct: 120 ETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIY----SFQMA 175
Query: 171 RNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVL--LMTL 228
+ V T + APEV+ Q Y D+WS G E+ F + L ++ +
Sbjct: 176 LTSVVVTLWYRAPEVLLQ-SSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDV 234
Query: 229 QNAPPGLDYERD----------------RKFSKSF----KQMIASCLVKDPSKRPSAKKL 268
P D+ RD KF K ++ CL +P+KR SA
Sbjct: 235 IGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSA 294
Query: 269 LKHSFFK 275
L H +F+
Sbjct: 295 LSHPYFQ 301
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 105/213 (49%), Gaps = 11/213 (5%)
Query: 59 EAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILR 118
EA+ M+ + H +++ + ++++ +M+ G L+ L+ F+ + + +
Sbjct: 53 EAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREM-RHRFQTQQLLEMCK 111
Query: 119 EVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTP 178
+V + ++YL +HRD+ + N L++ +G +K+ DFG+S + D + + F P
Sbjct: 112 DVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKF---P 168
Query: 179 C-WMAPEVMEQLHGYDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLD 236
W PEV+ + K+DIW+FG+ E+ + G P+ ++ + T ++ GL
Sbjct: 169 VRWSPPEVL-MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE----TAEHIAQGLR 223
Query: 237 YERDRKFSKSFKQMIASCLVKDPSKRPSAKKLL 269
R S+ ++ SC + +RP+ K LL
Sbjct: 224 LYRPHLASEKVYTIMYSCWHEKADERPTFKILL 256
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 124/298 (41%), Gaps = 48/298 (16%)
Query: 19 VGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHP--------- 69
VG G SV A+ E VA+K L R R + ++L+ H
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLS--RPFQSEIFAKRAYRELLLLKHMQHENVIGLL 89
Query: 70 NVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHH 129
+V S + ++ ++VMPFM L+ F E I ++ ++LKGL Y+H
Sbjct: 90 DVFTPASSLRNFYDFYLVMPFMQTD-----LQKIMGLKFSEEKIQYLVYQMLKGLKYIHS 144
Query: 130 HGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQL 189
G +HRD+K GN+ ++ +K+ DFG++ D + +V T + APEV+
Sbjct: 145 AGVVHRDLKPGNLAVNEDCELKILDFGLAR----HADAE--MTGYVVTRWYRAPEVILSW 198
Query: 190 HGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NAPPGLDY--ERDRKFSKS 246
Y+ DIWS G E+ G F + L L+ PG ++ + + K +KS
Sbjct: 199 MHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKS 258
Query: 247 FKQ-----------------------MIASCLVKDPSKRPSAKKLLKHSFFKQARSNE 281
+ Q ++ L D KR +A + L H FF+ R E
Sbjct: 259 YIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFRDPE 316
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 124/298 (41%), Gaps = 48/298 (16%)
Query: 19 VGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHP--------- 69
VG G SV A+ E VA+K L R R + ++L+ H
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLS--RPFQSEIFAKRAYRELLLLKHMQHENVIGLL 107
Query: 70 NVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHH 129
+V S + ++ ++VMPFM L+ F E I ++ ++LKGL Y+H
Sbjct: 108 DVFTPASSLRNFYDFYLVMPFMQTD-----LQKIMGMEFSEEKIQYLVYQMLKGLKYIHS 162
Query: 130 HGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQL 189
G +HRD+K GN+ ++ +K+ DFG++ D + +V T + APEV+
Sbjct: 163 AGVVHRDLKPGNLAVNEDCELKILDFGLAR----HADAE--MTGYVVTRWYRAPEVILSW 216
Query: 190 HGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NAPPGLDY--ERDRKFSKS 246
Y+ DIWS G E+ G F + L L+ PG ++ + + K +KS
Sbjct: 217 MHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKS 276
Query: 247 FKQ-----------------------MIASCLVKDPSKRPSAKKLLKHSFFKQARSNE 281
+ Q ++ L D KR +A + L H FF+ R E
Sbjct: 277 YIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFRDPE 334
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 132/305 (43%), Gaps = 50/305 (16%)
Query: 13 YTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPNVL 72
YT + +G G V +A + +E+ K+L +R + RE Q M +V HPNV+
Sbjct: 42 YTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKN------RELQIMRIVKHPNVV 95
Query: 73 KSHCSFVSDHN------LWVVMPFM-----SGGSCLHILKAAYPDGFEEVVIATILREVL 121
F S+ + L +V+ ++ LK P ++I + ++L
Sbjct: 96 DLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMP----MLLIKLYMYQLL 151
Query: 122 KGLDYLHHHGHIHRDVKSGNILID-VRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCW 180
+ L Y+H G HRD+K N+L+D G +KL DFG SA + +G+ + + + +
Sbjct: 152 RSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFG-SAKILIAGEPNV---SXICSRYY 207
Query: 181 MAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ----------- 229
APE++ Y DIWS G EL G F + L+ ++
Sbjct: 208 RAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIK 267
Query: 230 -NAPPGLDYE----RDRKFSKSFK--------QMIASCLVKDPSKRPSAKKLLKHSFFKQ 276
P ++++ R FSK F+ +I+ L PS R +A + L H FF +
Sbjct: 268 TMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDE 327
Query: 277 ARSNE 281
R+ E
Sbjct: 328 LRTGE 332
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 105/213 (49%), Gaps = 11/213 (5%)
Query: 59 EAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILR 118
EA+ M+ + H +++ + ++++ +M+ G L+ L+ F+ + + +
Sbjct: 54 EAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREM-RHRFQTQQLLEMCK 112
Query: 119 EVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTP 178
+V + ++YL +HRD+ + N L++ +G +K+ DFG+S + D + + F P
Sbjct: 113 DVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKF---P 169
Query: 179 C-WMAPEVMEQLHGYDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLD 236
W PEV+ + K+DIW+FG+ E+ + G P+ ++ + T ++ GL
Sbjct: 170 VRWSPPEVL-MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE----TAEHIAQGLR 224
Query: 237 YERDRKFSKSFKQMIASCLVKDPSKRPSAKKLL 269
R S+ ++ SC + +RP+ K LL
Sbjct: 225 LYRPHLASEKVYTIMYSCWHEKADERPTFKILL 257
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 105/213 (49%), Gaps = 11/213 (5%)
Query: 59 EAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILR 118
EA+ M+ + H +++ + ++++ +M+ G L+ L+ F+ + + +
Sbjct: 69 EAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREM-RHRFQTQQLLEMCK 127
Query: 119 EVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTP 178
+V + ++YL +HRD+ + N L++ +G +K+ DFG+S + D + + F P
Sbjct: 128 DVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKF---P 184
Query: 179 C-WMAPEVMEQLHGYDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLD 236
W PEV+ + K+DIW+FG+ E+ + G P+ ++ + T ++ GL
Sbjct: 185 VRWSPPEVL-MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE----TAEHIAQGLR 239
Query: 237 YERDRKFSKSFKQMIASCLVKDPSKRPSAKKLL 269
R S+ ++ SC + +RP+ K LL
Sbjct: 240 LYRPHLASEKVYTIMYSCWHEKADERPTFKILL 272
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 128/307 (41%), Gaps = 38/307 (12%)
Query: 1 MDKKKYPIGAEHYTLYEEVGQGVSASVHRALCIP-FNEIVAVKILDFE--RDNSDLSNIS 57
M+K + Y E+G+G V +A + VA+K + + + LS I
Sbjct: 1 MEKDGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIR 60
Query: 58 REA--QTMILVDHPNVLKSH--CSFVS---DHNLWVVMPFMSGGSCLHILKAAYPDGFEE 110
A + + +HPNV++ C+ + L +V + ++ K P G
Sbjct: 61 EVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEP-GVPT 119
Query: 111 VVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRM 170
I ++ ++L+GLD+LH H +HRD+K NIL+ G IKL DFG++ Q
Sbjct: 120 ETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIY----SFQMA 175
Query: 171 RNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVL--LMTL 228
+ V T + APEV+ Q Y D+WS G E+ F + L ++ +
Sbjct: 176 LTSVVVTLWYRAPEVLLQ-SSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDV 234
Query: 229 QNAPPGLDYERD----------------RKFSKSF----KQMIASCLVKDPSKRPSAKKL 268
P D+ RD KF K ++ CL +P+KR SA
Sbjct: 235 IGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSA 294
Query: 269 LKHSFFK 275
L H +F+
Sbjct: 295 LSHPYFQ 301
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 105/213 (49%), Gaps = 11/213 (5%)
Query: 59 EAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILR 118
EA+ M+ + H +++ + ++++ +M+ G L+ L+ F+ + + +
Sbjct: 60 EAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREM-RHRFQTQQLLEMCK 118
Query: 119 EVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTP 178
+V + ++YL +HRD+ + N L++ +G +K+ DFG+S + D + + F P
Sbjct: 119 DVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKF---P 175
Query: 179 C-WMAPEVMEQLHGYDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLD 236
W PEV+ + K+DIW+FG+ E+ + G P+ ++ + T ++ GL
Sbjct: 176 VRWSPPEVL-MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE----TAEHIAQGLR 230
Query: 237 YERDRKFSKSFKQMIASCLVKDPSKRPSAKKLL 269
R S+ ++ SC + +RP+ K LL
Sbjct: 231 LYRPHLASEKVYTIMYSCWHEKADERPTFKILL 263
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 105/237 (44%), Gaps = 17/237 (7%)
Query: 39 VAVKILDFERDNSDLSNISREAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLH 98
VA+K L + + EA M DHPN++ + ++ +M GS
Sbjct: 45 VAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDA 104
Query: 99 ILKAAYPDG-FEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGV 157
L+ DG F + + +LR + G+ YL ++HRD+ + NIL++ K+ DFG+
Sbjct: 105 FLRKN--DGRFTVIQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGM 162
Query: 158 SACLFDSGDRQRMRNTFVG-TPC-WMAPEVMEQLHGYDFKADIWSFGITALE-LAHGHAP 214
S L D D + T G P W APE + + +D+WS+GI E +++G P
Sbjct: 163 SRVLED--DPEAAYTTRGGKIPIRWTAPEAI-AYRKFTSASDVWSYGIVMWEVMSYGERP 219
Query: 215 FSKYPPMKVLLMTLQNA--PPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLL 269
+ V+ + PP +D + Q++ C K+ S RP +++
Sbjct: 220 YWDMSNQDVIKAIEEGYRLPPPMD------CPIALHQLMLDCWQKERSDRPKFGQIV 270
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 121/269 (44%), Gaps = 32/269 (11%)
Query: 2 DKKKYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQ 61
+K + I E L +++G G V A +N+ V + + + + EA
Sbjct: 173 EKDAWEIPRESLKLEKKLGAGQFGEVWMAT---YNKHTKVAVKTMKPGSMSVEAFLAEAN 229
Query: 62 TMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVV--IATILRE 119
M + H ++K H + V+ ++++ FM+ GS L LK+ +G ++ + + +
Sbjct: 230 VMKTLQHDKLVKLH-AVVTKEPIYIITEFMAKGSLLDFLKSD--EGSKQPLPKLIDFSAQ 286
Query: 120 VLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPC 179
+ +G+ ++ +IHRD+++ NIL+ K+ DFG++ R+ F P
Sbjct: 287 IAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLA----------RVGAKF---PI 333
Query: 180 -WMAPEVMEQLHGYDFKADIWSFGITALEL-AHGHAPFSKYPPMK--VLLMTLQNAPPGL 235
W APE + + K+D+WSFGI +E+ +G P YP M ++ L+ G
Sbjct: 334 KWTAPEAI-NFGSFTIKSDVWSFGILLMEIVTYGRIP---YPGMSNPEVIRALER---GY 386
Query: 236 DYERDRKFSKSFKQMIASCLVKDPSKRPS 264
R + ++ C P +RP+
Sbjct: 387 RMPRPENCPEELYNIMMRCWKNRPEERPT 415
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 105/237 (44%), Gaps = 17/237 (7%)
Query: 39 VAVKILDFERDNSDLSNISREAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLH 98
VA+K L + + EA M DHPN++ + ++ +M GS
Sbjct: 39 VAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDA 98
Query: 99 ILKAAYPDG-FEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGV 157
L+ DG F + + +LR + G+ YL ++HRD+ + NIL++ K+ DFG+
Sbjct: 99 FLRKN--DGRFTVIQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGM 156
Query: 158 SACLFDSGDRQRMRNTFVG-TPC-WMAPEVMEQLHGYDFKADIWSFGITALE-LAHGHAP 214
S L D D + T G P W APE + + +D+WS+GI E +++G P
Sbjct: 157 SRVLED--DPEAAYTTRGGKIPIRWTAPEAI-AYRKFTSASDVWSYGIVMWEVMSYGERP 213
Query: 215 FSKYPPMKVLLMTLQNA--PPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLL 269
+ V+ + PP +D + Q++ C K+ S RP +++
Sbjct: 214 YWDMSNQDVIKAIEEGYRLPPPMD------CPIALHQLMLDCWQKERSDRPKFGQIV 264
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 104/213 (48%), Gaps = 11/213 (5%)
Query: 59 EAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILR 118
EA+ M+ + H +++ + ++++ +M+ G L+ L+ F+ + + +
Sbjct: 54 EAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREM-RHRFQTQQLLEMCK 112
Query: 119 EVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTP 178
+V + ++YL +HRD+ + N L++ +G +K+ DFG+S + D + F P
Sbjct: 113 DVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKF---P 169
Query: 179 C-WMAPEVMEQLHGYDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLD 236
W PEV+ + K+DIW+FG+ E+ + G P+ ++ + T ++ GL
Sbjct: 170 VRWSPPEVL-MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE----TAEHIAQGLR 224
Query: 237 YERDRKFSKSFKQMIASCLVKDPSKRPSAKKLL 269
R S+ ++ SC + +RP+ K LL
Sbjct: 225 LYRPHLASEKVYTIMYSCWHEKADERPTFKILL 257
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 129/293 (44%), Gaps = 38/293 (12%)
Query: 1 MDKKKYPIGAEHYTLYEEVGQGVSASVHRALCIPFN-----EIVAVKILDFERDNSDLSN 55
++ K+ ++ L + +G+G V +A VAVK+L S+L +
Sbjct: 13 LEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRD 72
Query: 56 ISREAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAA------------ 103
+ E + V+HP+V+K + + D L +++ + GS L+ +
Sbjct: 73 LLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGG 132
Query: 104 --------YPDGFEEVV--IATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLG 153
+PD + + + ++ +G+ YL +HRD+ + NIL+ +K+
Sbjct: 133 SRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKIS 192
Query: 154 DFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAH-GH 212
DFG+S +++ D R+ WMA E + H Y ++D+WSFG+ E+ G
Sbjct: 193 DFGLSRDVYEE-DSXVKRSQGRIPVKWMAIESLFD-HIYTTQSDVWSFGVLLWEIVTLGG 250
Query: 213 APFSKYPPMKV--LLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRP 263
P+ PP ++ LL T G ER S+ +++ C ++P KRP
Sbjct: 251 NPYPGIPPERLFNLLKT------GHRMERPDNCSEEMYRLMLQCWKQEPDKRP 297
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 92/178 (51%), Gaps = 12/178 (6%)
Query: 36 NEIVAVKILDFERDNSDLSNISREAQTMILVDHPNVLKSH--CSFVSDHNLWVVMPFMSG 93
E+VAVK L S RE + + + H +++K C + ++ +VM ++
Sbjct: 38 GEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPL 97
Query: 94 GSCLHILKAAYPD---GFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAI 150
GS L+ P G ++++ +++ +G+ YLH +IHR + + N+L+D +
Sbjct: 98 GS----LRDYLPRHCVGLAQLLL--FAQQICEGMAYLHAQHYIHRALAARNVLLDNDRLV 151
Query: 151 KLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALEL 208
K+GDFG++ + + + R+R W APE +++ Y + +D+WSFG+T EL
Sbjct: 152 KIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFY-YASDVWSFGVTLYEL 208
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 112/265 (42%), Gaps = 18/265 (6%)
Query: 8 IGAEHYTLYEEVGQGVSASVHRA-LCIPFNE--IVAVKILDFERDNSDLSNISREAQTMI 64
I + + E +G G V R L P + VA+K L EA M
Sbjct: 11 IDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMG 70
Query: 65 LVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDG-FEEVVIATILREVLKG 123
+HPN+++ + + ++ FM G+ L+ DG F + + +LR + G
Sbjct: 71 QFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLN--DGQFTVIQLVGMLRGIASG 128
Query: 124 LDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVG-TPC-WM 181
+ YL ++HRD+ + NIL++ K+ DFG+S L ++ ++ G P W
Sbjct: 129 MRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWT 188
Query: 182 APEVMEQLHGYDFKADIWSFGITALE-LAHGHAPFSKYPPMKVLLMTLQNA--PPGLDYE 238
APE + + +D WS+GI E ++ G P+ V+ Q+ PP D
Sbjct: 189 APEAI-AFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYRLPPPPDC- 246
Query: 239 RDRKFSKSFKQMIASCLVKDPSKRP 263
S Q++ C KD + RP
Sbjct: 247 -----PTSLHQLMLDCWQKDRNARP 266
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 118/265 (44%), Gaps = 16/265 (6%)
Query: 13 YTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFER-DNSDLS-NISREAQTMILVDHPN 70
Y + E +G+G V A + VA+K + + SD+ + RE + L+ HP+
Sbjct: 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPH 70
Query: 71 VLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHH 130
++K + + ++ +V+ + G +I++ E ++++ ++Y H H
Sbjct: 71 IIKLYDVITTPTDIVMVIEYAGGELFDYIVEKK---RMTEDEGRRFFQQIICAIEYCHRH 127
Query: 131 GHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLH 190
+HRD+K N+L+D +K+ DFG+S + D T G+P + APEV+
Sbjct: 128 KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN----FLKTSCGSPNYAAPEVINGKL 183
Query: 191 GYDFKADIWSFGITALELAHGHAPF-SKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQ 249
+ D+WS GI + G PF ++ P L Y S +
Sbjct: 184 YAGPEVDVWSCGIVLYVMLVGRLPFDDEFIP------NLFKKVNSCVYVMPDFLSPGAQS 237
Query: 250 MIASCLVKDPSKRPSAKKLLKHSFF 274
+I +V DP +R + +++ + +F
Sbjct: 238 LIRRMIVADPMQRITIQEIRRDPWF 262
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 92/178 (51%), Gaps = 12/178 (6%)
Query: 36 NEIVAVKILDFERDNSDLSNISREAQTMILVDHPNVLKSH--CSFVSDHNLWVVMPFMSG 93
E+VAVK L S RE + + + H +++K C + ++ +VM ++
Sbjct: 37 GEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPL 96
Query: 94 GSCLHILKAAYPD---GFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAI 150
GS L+ P G ++++ +++ +G+ YLH +IHR + + N+L+D +
Sbjct: 97 GS----LRDYLPRHCVGLAQLLL--FAQQICEGMAYLHAQHYIHRALAARNVLLDNDRLV 150
Query: 151 KLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALEL 208
K+GDFG++ + + + R+R W APE +++ Y + +D+WSFG+T EL
Sbjct: 151 KIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFY-YASDVWSFGVTLYEL 207
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 112/265 (42%), Gaps = 18/265 (6%)
Query: 8 IGAEHYTLYEEVGQGVSASVHRA-LCIPFNE--IVAVKILDFERDNSDLSNISREAQTMI 64
I + + E +G G V R L P + VA+K L EA M
Sbjct: 13 IDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMG 72
Query: 65 LVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDG-FEEVVIATILREVLKG 123
+HPN+++ + + ++ FM G+ L+ DG F + + +LR + G
Sbjct: 73 QFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLN--DGQFTVIQLVGMLRGIASG 130
Query: 124 LDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVG-TPC-WM 181
+ YL ++HRD+ + NIL++ K+ DFG+S L ++ ++ G P W
Sbjct: 131 MRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWT 190
Query: 182 APEVMEQLHGYDFKADIWSFGITALE-LAHGHAPFSKYPPMKVLLMTLQNA--PPGLDYE 238
APE + + +D WS+GI E ++ G P+ V+ Q+ PP D
Sbjct: 191 APEAI-AFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYRLPPPPDC- 248
Query: 239 RDRKFSKSFKQMIASCLVKDPSKRP 263
S Q++ C KD + RP
Sbjct: 249 -----PTSLHQLMLDCWQKDRNARP 268
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 129/274 (47%), Gaps = 32/274 (11%)
Query: 19 VGQGVSASVHRALCIPFNEI----VAVKILDFERDNSDLSNISREAQTMILVDHPNVLKS 74
+G GV +VH+ + IP E V +K+++ + ++ + +DH ++++
Sbjct: 39 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 98
Query: 75 HCSFVSDHNLWVVMPFMSGGSCL-HILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHI 133
+L +V ++ GS L H+ + G + ++ + ++ KG+ YL HG +
Sbjct: 99 -LGLCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGV--QIAKGMYYLEEHGMV 155
Query: 134 HRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLH--G 191
HR++ + N+L+ +++ DFGV A L D+Q + + WMA +E +H
Sbjct: 156 HRNLAARNVLLKSPSQVQVADFGV-ADLLPPDDKQLLYSEAKTPIKWMA---LESIHFGK 211
Query: 192 YDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSK----- 245
Y ++D+WS+G+T EL G P++ + L P L E+ + ++
Sbjct: 212 YTHQSDVWSYGVTVWELMTFGAEPYAG--------LRLAEVPDLL--EKGERLAQPQICT 261
Query: 246 -SFKQMIASCLVKDPSKRPSAKKLLKHSFFKQAR 278
++ C + D + RP+ K+ L + F + AR
Sbjct: 262 IDVYMVMVKCWMIDENIRPTFKE-LANEFTRMAR 294
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 126/285 (44%), Gaps = 29/285 (10%)
Query: 3 KKKYPIGAEHYTLYE-EVGQGVSASVHRALCIPFNEIVAVKIL---DFERDNS---DLSN 55
K + P A++ YE ++G+G VH+ + +VA+K L D E +
Sbjct: 10 KSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQE 69
Query: 56 ISREAQTMILVDHPNVLKSHCSFVSDHNL-WVVMPFMSGGSCLH-ILKAAYPDGFEEVVI 113
RE M ++HPN++K + HN +VM F+ G H +L A+P + V
Sbjct: 70 FQREVFIMSNLNHPNIVKLYGLM---HNPPRMVMEFVPCGDLYHRLLDKAHPIKWS--VK 124
Query: 114 ATILREVLKGLDYLHHHGH--IHRDVKSGNILI---DVRGAI--KLGDFGVSACLFDSGD 166
++ ++ G++Y+ + +HRD++S NI + D + K+ DFG+S S
Sbjct: 125 LRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHS-- 182
Query: 167 RQRMRNTFVGTPCWMAPEVM-EQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLL 225
+ +G WMAPE + + Y KAD +SF + + G PF +Y K+
Sbjct: 183 ----VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKF 238
Query: 226 MTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLK 270
+ + GL + +I C DP KRP ++K
Sbjct: 239 INMIRE-EGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVK 282
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 129/280 (46%), Gaps = 29/280 (10%)
Query: 13 YTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFER-DNSDLSNISRE-AQTMILVDHPN 70
Y++ +++G G S+ V + L +I A+K ++ E DN L + E A L H +
Sbjct: 58 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 116
Query: 71 -VLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHH 129
+++ + ++D +++VM + + K D +E + + +L+ + +H
Sbjct: 117 KIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWER---KSYWKNMLEAVHTIHQ 173
Query: 130 HGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQL 189
HG +H D+K N LI V G +KL DFG+ A ++++ VGT +M PE ++ +
Sbjct: 174 HGIVHSDLKPANFLI-VDGMLKLIDFGI-ANQMQPDTTSVVKDSQVGTVNYMPPEAIKDM 231
Query: 190 HG----------YDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYER 239
K+D+WS G + +G PF + ++ + +D
Sbjct: 232 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ------IINQISKLHAIIDPNH 285
Query: 240 DRKF----SKSFKQMIASCLVKDPSKRPSAKKLLKHSFFK 275
+ +F K + ++ CL +DP +R S +LL H + +
Sbjct: 286 EIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 325
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 104/237 (43%), Gaps = 17/237 (7%)
Query: 39 VAVKILDFERDNSDLSNISREAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLH 98
VA+K L + + EA M DHPN++ + ++ +M GS
Sbjct: 60 VAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDA 119
Query: 99 ILKAAYPDG-FEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGV 157
L+ DG F + + +LR + G+ YL +HRD+ + NIL++ K+ DFG+
Sbjct: 120 FLRKN--DGRFTVIQLVGMLRGIGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGM 177
Query: 158 SACLFDSGDRQRMRNTFVG-TPC-WMAPEVMEQLHGYDFKADIWSFGITALE-LAHGHAP 214
S L D D + T G P W APE + + +D+WS+GI E +++G P
Sbjct: 178 SRVLED--DPEAAYTTRGGKIPIRWTAPEAI-AYRKFTSASDVWSYGIVMWEVMSYGERP 234
Query: 215 FSKYPPMKVLLMTLQNA--PPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLL 269
+ V+ + PP +D + Q++ C K+ S RP +++
Sbjct: 235 YWDMSNQDVIKAIEEGYRLPPPMD------CPIALHQLMLDCWQKERSDRPKFGQIV 285
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 129/293 (44%), Gaps = 38/293 (12%)
Query: 1 MDKKKYPIGAEHYTLYEEVGQGVSASVHRALCIPFN-----EIVAVKILDFERDNSDLSN 55
++ K+ ++ L + +G+G V +A VAVK+L S+L +
Sbjct: 13 LEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRD 72
Query: 56 ISREAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAA------------ 103
+ E + V+HP+V+K + + D L +++ + GS L+ +
Sbjct: 73 LLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGG 132
Query: 104 --------YPDGFEEVV--IATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLG 153
+PD + + + ++ +G+ YL +HRD+ + NIL+ +K+
Sbjct: 133 SRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKIS 192
Query: 154 DFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAH-GH 212
DFG+S +++ D R+ WMA E + H Y ++D+WSFG+ E+ G
Sbjct: 193 DFGLSRDVYEE-DSXVKRSQGRIPVKWMAIESLFD-HIYTTQSDVWSFGVLLWEIVTLGG 250
Query: 213 APFSKYPPMKV--LLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRP 263
P+ PP ++ LL T G ER S+ +++ C ++P KRP
Sbjct: 251 NPYPGIPPERLFNLLKT------GHRMERPDNCSEEMYRLMLQCWKQEPDKRP 297
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 124/285 (43%), Gaps = 29/285 (10%)
Query: 3 KKKYPIGAEHYTLYE-EVGQGVSASVHRALCIPFNEIVAVKIL---DFERDNS---DLSN 55
K + P A++ YE ++G+G VH+ + +VA+K L D E +
Sbjct: 10 KSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQE 69
Query: 56 ISREAQTMILVDHPNVLKSHCSFVSDHNL-WVVMPFMSGGSCLH-ILKAAYPDGFEEVVI 113
RE M ++HPN++K + HN +VM F+ G H +L A+P + V
Sbjct: 70 FQREVFIMSNLNHPNIVKLYGLM---HNPPRMVMEFVPCGDLYHRLLDKAHPIKWS--VK 124
Query: 114 ATILREVLKGLDYLHHHGH--IHRDVKSGNILI-----DVRGAIKLGDFGVSACLFDSGD 166
++ ++ G++Y+ + +HRD++S NI + + K+ DFG S S
Sbjct: 125 LRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHS-- 182
Query: 167 RQRMRNTFVGTPCWMAPEVM-EQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLL 225
+ +G WMAPE + + Y KAD +SF + + G PF +Y K+
Sbjct: 183 ----VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKF 238
Query: 226 MTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLK 270
+ + GL + +I C DP KRP ++K
Sbjct: 239 INMIRE-EGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVK 282
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 123/277 (44%), Gaps = 27/277 (9%)
Query: 14 TLYEEVGQGVSASVHRALCIPFNE-----IVAVKILDFERDNSDLSNISREAQTMILVDH 68
L E+G+G V A C + +VAVK L + + + REA+ + + H
Sbjct: 18 VLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALK-DPTLAARKDFQREAELLTNLQH 76
Query: 69 PNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGF-----------EEVVIATIL 117
+++K + L +V +M G L+A PD E+ ++ +L
Sbjct: 77 EHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQML 136
Query: 118 R---EVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTF 174
++ G+ YL +HRD+ + N L+ +K+GDFG+S ++ S D R+
Sbjct: 137 HIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVY-STDYYRVGGHT 195
Query: 175 VGTPCWMAPEVMEQLHGYDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPP 233
+ WM PE + + ++D+WSFG+ E+ +G P+ + +V+ Q
Sbjct: 196 MLPIRWMPPESI-MYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQ---- 250
Query: 234 GLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLK 270
G ER R K ++ C ++P +R + K++ K
Sbjct: 251 GRVLERPRVCPKEVYDVMLGCWQREPQQRLNIKEIYK 287
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 120/271 (44%), Gaps = 33/271 (12%)
Query: 18 EVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPNVLKSHCS 77
E G+ V A+ VAVK+L S+L ++ E + V+HP+V+K + +
Sbjct: 35 EFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGA 94
Query: 78 FVSDHNLWVVMPFMSGGSCLHILKAA--------------------YPDGFEEVV--IAT 115
D L +++ + GS L+ + +PD + + +
Sbjct: 95 CSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLIS 154
Query: 116 ILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFV 175
++ +G+ YL +HRD+ + NIL+ +K+ DFG+S +++ D R+
Sbjct: 155 FAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEE-DSYVKRSQGR 213
Query: 176 GTPCWMAPEVMEQLHGYDFKADIWSFGITALELAH-GHAPFSKYPPMKV--LLMTLQNAP 232
WMA E + H Y ++D+WSFG+ E+ G P+ PP ++ LL T
Sbjct: 214 IPVKWMAIESLFD-HIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKT----- 267
Query: 233 PGLDYERDRKFSKSFKQMIASCLVKDPSKRP 263
G ER S+ +++ C ++P KRP
Sbjct: 268 -GHRMERPDNCSEEMYRLMLQCWKQEPDKRP 297
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 129/280 (46%), Gaps = 29/280 (10%)
Query: 13 YTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFER-DNSDLSNISRE-AQTMILVDHPN 70
Y++ +++G G S+ V + L +I A+K ++ E DN L + E A L H +
Sbjct: 14 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 72
Query: 71 -VLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHH 129
+++ + ++D +++VM + + K D +E + + +L+ + +H
Sbjct: 73 KIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWER---KSYWKNMLEAVHTIHQ 129
Query: 130 HGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQL 189
HG +H D+K N LI V G +KL DFG+ A ++++ VGT +M PE ++ +
Sbjct: 130 HGIVHSDLKPANFLI-VDGMLKLIDFGI-ANQMQPDTTSVVKDSQVGTVNYMPPEAIKDM 187
Query: 190 HG----------YDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYER 239
K+D+WS G + +G PF + ++ + +D
Sbjct: 188 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ------IINQISKLHAIIDPNH 241
Query: 240 DRKF----SKSFKQMIASCLVKDPSKRPSAKKLLKHSFFK 275
+ +F K + ++ CL +DP +R S +LL H + +
Sbjct: 242 EIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 281
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 99/215 (46%), Gaps = 15/215 (6%)
Query: 6 YPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMIL 65
+ I E L +++G G V +N V + + + EA M
Sbjct: 7 WEIPRESIKLVKKLGAGQFGEVWMGY---YNNSTKVAVKTLKPGTMSVQAFLEEANLMKT 63
Query: 66 VDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATIL---REVLK 122
+ H +++ + + ++++ FM+ GS L LK+ D +V++ ++ ++ +
Sbjct: 64 LQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKS---DEGGKVLLPKLIDFSAQIAE 120
Query: 123 GLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPC-WM 181
G+ Y+ +IHRD+++ N+L+ K+ DFG++ + D+ R F P W
Sbjct: 121 GMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKF---PIKWT 177
Query: 182 APEVMEQLHGYDFKADIWSFGITALELA-HGHAPF 215
APE + + K+++WSFGI E+ +G P+
Sbjct: 178 APEAI-NFGCFTIKSNVWSFGILLYEIVTYGKIPY 211
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 129/280 (46%), Gaps = 29/280 (10%)
Query: 13 YTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFER-DNSDLSNISRE-AQTMILVDHPN 70
Y++ +++G G S+ V + L +I A+K ++ E DN L + E A L H +
Sbjct: 58 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 116
Query: 71 -VLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHH 129
+++ + ++D +++VM + + K D +E + + +L+ + +H
Sbjct: 117 KIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWER---KSYWKNMLEAVHTIHQ 173
Query: 130 HGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQL 189
HG +H D+K N LI V G +KL DFG+ A ++++ VGT +M PE ++ +
Sbjct: 174 HGIVHSDLKPANFLI-VDGMLKLIDFGI-ANQMQPDTTSVVKDSQVGTVNYMPPEAIKDM 231
Query: 190 HG----------YDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYER 239
K+D+WS G + +G PF + ++ + +D
Sbjct: 232 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ------IINQISKLHAIIDPNH 285
Query: 240 DRKF----SKSFKQMIASCLVKDPSKRPSAKKLLKHSFFK 275
+ +F K + ++ CL +DP +R S +LL H + +
Sbjct: 286 EIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 325
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 129/280 (46%), Gaps = 29/280 (10%)
Query: 13 YTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFER-DNSDLSNISRE-AQTMILVDHPN 70
Y++ +++G G S+ V + L +I A+K ++ E DN L + E A L H +
Sbjct: 30 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 88
Query: 71 -VLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHH 129
+++ + ++D +++VM + + K D +E + + +L+ + +H
Sbjct: 89 KIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWER---KSYWKNMLEAVHTIHQ 145
Query: 130 HGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQL 189
HG +H D+K N LI V G +KL DFG+ A ++++ VGT +M PE ++ +
Sbjct: 146 HGIVHSDLKPANFLI-VDGMLKLIDFGI-ANQMQPDTTSVVKDSQVGTVNYMPPEAIKDM 203
Query: 190 HG----------YDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYER 239
K+D+WS G + +G PF + ++ + +D
Sbjct: 204 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ------IINQISKLHAIIDPNH 257
Query: 240 DRKF----SKSFKQMIASCLVKDPSKRPSAKKLLKHSFFK 275
+ +F K + ++ CL +DP +R S +LL H + +
Sbjct: 258 EIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 297
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 129/274 (47%), Gaps = 32/274 (11%)
Query: 19 VGQGVSASVHRALCIPFNEI----VAVKILDFERDNSDLSNISREAQTMILVDHPNVLKS 74
+G GV +VH+ + IP E V +K+++ + ++ + +DH ++++
Sbjct: 21 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 80
Query: 75 HCSFVSDHNLWVVMPFMSGGSCL-HILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHI 133
+L +V ++ GS L H+ + G + ++ + ++ KG+ YL HG +
Sbjct: 81 -LGLCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGV--QIAKGMYYLEEHGMV 137
Query: 134 HRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLH--G 191
HR++ + N+L+ +++ DFGV A L D+Q + + WMA +E +H
Sbjct: 138 HRNLAARNVLLKSPSQVQVADFGV-ADLLPPDDKQLLYSEAKTPIKWMA---LESIHFGK 193
Query: 192 YDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSK----- 245
Y ++D+WS+G+T EL G P++ + L P L E+ + ++
Sbjct: 194 YTHQSDVWSYGVTVWELMTFGAEPYAG--------LRLAEVPDLL--EKGERLAQPQICT 243
Query: 246 -SFKQMIASCLVKDPSKRPSAKKLLKHSFFKQAR 278
++ C + D + RP+ K+ L + F + AR
Sbjct: 244 IDVYMVMVKCWMIDENIRPTFKE-LANEFTRMAR 276
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 129/280 (46%), Gaps = 29/280 (10%)
Query: 13 YTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFER-DNSDLSNISRE-AQTMILVDHPN 70
Y++ +++G G S+ V + L +I A+K ++ E DN L + E A L H +
Sbjct: 11 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 69
Query: 71 -VLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHH 129
+++ + ++D +++VM + + K D +E + + +L+ + +H
Sbjct: 70 KIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWER---KSYWKNMLEAVHTIHQ 126
Query: 130 HGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQL 189
HG +H D+K N LI V G +KL DFG+ A ++++ VGT +M PE ++ +
Sbjct: 127 HGIVHSDLKPANFLI-VDGMLKLIDFGI-ANQMQPDTTSVVKDSQVGTVNYMPPEAIKDM 184
Query: 190 HG----------YDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYER 239
K+D+WS G + +G PF + ++ + +D
Sbjct: 185 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ------IINQISKLHAIIDPNH 238
Query: 240 DRKF----SKSFKQMIASCLVKDPSKRPSAKKLLKHSFFK 275
+ +F K + ++ CL +DP +R S +LL H + +
Sbjct: 239 EIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 278
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 105/225 (46%), Gaps = 20/225 (8%)
Query: 58 REAQTMILVDHPNVLKSHCSFVSD-HNLWVVMPFMSGGSCLHILKAAYPDGFEEV---VI 113
+E + M H N+++ F SD +L +V +M GS L L DG + +
Sbjct: 79 QEIKVMAKCQHENLVEL-LGFSSDGDDLCLVYVYMPNGSLLDRLSCL--DGTPPLSWHMR 135
Query: 114 ATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNT 173
I + G+++LH + HIHRD+KS NIL+D K+ DFG++ + + M +
Sbjct: 136 CKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARA-SEKFAQTVMXSR 194
Query: 174 FVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLL----MTLQ 229
VGT +MAPE + K+DI+SFG+ LE+ G ++ ++LL
Sbjct: 195 IVGTTAYMAPEALRG--EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIED 252
Query: 230 NAPPGLDY------ERDRKFSKSFKQMIASCLVKDPSKRPSAKKL 268
DY + D ++ + + CL + +KRP KK+
Sbjct: 253 EEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKV 297
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 129/280 (46%), Gaps = 29/280 (10%)
Query: 13 YTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFER-DNSDLSNISRE-AQTMILVDHPN 70
Y++ +++G G S+ V + L +I A+K ++ E DN L + E A L H +
Sbjct: 10 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 68
Query: 71 -VLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHH 129
+++ + ++D +++VM + + K D +E + + +L+ + +H
Sbjct: 69 KIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWER---KSYWKNMLEAVHTIHQ 125
Query: 130 HGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQL 189
HG +H D+K N LI V G +KL DFG+ A ++++ VGT +M PE ++ +
Sbjct: 126 HGIVHSDLKPANFLI-VDGMLKLIDFGI-ANQMQPDTTSVVKDSQVGTVNYMPPEAIKDM 183
Query: 190 HG----------YDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYER 239
K+D+WS G + +G PF + ++ + +D
Sbjct: 184 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ------IINQISKLHAIIDPNH 237
Query: 240 DRKF----SKSFKQMIASCLVKDPSKRPSAKKLLKHSFFK 275
+ +F K + ++ CL +DP +R S +LL H + +
Sbjct: 238 EIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 277
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 127/287 (44%), Gaps = 38/287 (13%)
Query: 3 KKKYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFER--DNSDLSNISREA 60
K+K P+ ++ Y + +G G SV+ + + N VA+K ++ +R D +L N +R
Sbjct: 29 KEKEPLESQ-YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 87
Query: 61 QTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYP-----------DGFE 109
++L+ + S S V W P S + IL+ P +
Sbjct: 88 MEVVLLKK---VSSGFSGVIRLLDWFERP----DSFVLILERPEPVQDLFDFITERGALQ 140
Query: 110 EVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDV-RGAIKLGDFGVSACLFDSGDRQ 168
E + + +VL+ + + H+ G +HRD+K NILID+ RG +KL DFG A L D+
Sbjct: 141 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---- 196
Query: 169 RMRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTL 228
+ F GT + PE + + A +WS GI ++ G PF
Sbjct: 197 -VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD---------- 245
Query: 229 QNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSFFK 275
+ G + R R S + +I CL PS RP+ +++ H + +
Sbjct: 246 EEIIGGQVFFRQR-VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 291
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 127/287 (44%), Gaps = 38/287 (13%)
Query: 3 KKKYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFER--DNSDLSNISREA 60
K+K P+ ++ Y + +G G SV+ + + N VA+K ++ +R D +L N +R
Sbjct: 29 KEKEPLESQ-YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 87
Query: 61 QTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYP-----------DGFE 109
++L+ + S S V W P S + IL+ P +
Sbjct: 88 MEVVLLKK---VSSGFSGVIRLLDWFERP----DSFVLILERPEPVQDLFDFITERGALQ 140
Query: 110 EVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDV-RGAIKLGDFGVSACLFDSGDRQ 168
E + + +VL+ + + H+ G +HRD+K NILID+ RG +KL DFG A L D+
Sbjct: 141 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---- 196
Query: 169 RMRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTL 228
+ F GT + PE + + A +WS GI ++ G PF
Sbjct: 197 -VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD---------- 245
Query: 229 QNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSFFK 275
+ G + R R S + +I CL PS RP+ +++ H + +
Sbjct: 246 EEIIGGQVFFRQR-VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 291
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 127/287 (44%), Gaps = 38/287 (13%)
Query: 3 KKKYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFER--DNSDLSNISREA 60
K+K P+ ++ Y + +G G SV+ + + N VA+K ++ +R D +L N +R
Sbjct: 30 KEKEPLESQ-YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 88
Query: 61 QTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYP-----------DGFE 109
++L+ + S S V W P S + IL+ P +
Sbjct: 89 MEVVLLKK---VSSGFSGVIRLLDWFERP----DSFVLILERPEPVQDLFDFITERGALQ 141
Query: 110 EVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDV-RGAIKLGDFGVSACLFDSGDRQ 168
E + + +VL+ + + H+ G +HRD+K NILID+ RG +KL DFG A L D+
Sbjct: 142 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---- 197
Query: 169 RMRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTL 228
+ F GT + PE + + A +WS GI ++ G PF
Sbjct: 198 -VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD---------- 246
Query: 229 QNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSFFK 275
+ G + R R S + +I CL PS RP+ +++ H + +
Sbjct: 247 EEIIGGQVFFRQR-VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 292
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 129/280 (46%), Gaps = 29/280 (10%)
Query: 13 YTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFER-DNSDLSNISRE-AQTMILVDHPN 70
Y++ +++G G S+ V + L +I A+K ++ E DN L + E A L H +
Sbjct: 30 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 88
Query: 71 -VLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHH 129
+++ + ++D +++VM + + K D +E + + +L+ + +H
Sbjct: 89 KIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWER---KSYWKNMLEAVHTIHQ 145
Query: 130 HGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQL 189
HG +H D+K N LI V G +KL DFG+ A ++++ VGT +M PE ++ +
Sbjct: 146 HGIVHSDLKPANFLI-VDGMLKLIDFGI-ANQMQPDXXXVVKDSQVGTVNYMPPEAIKDM 203
Query: 190 HG----------YDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYER 239
K+D+WS G + +G PF + ++ + +D
Sbjct: 204 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ------IINQISKLHAIIDPNH 257
Query: 240 DRKF----SKSFKQMIASCLVKDPSKRPSAKKLLKHSFFK 275
+ +F K + ++ CL +DP +R S +LL H + +
Sbjct: 258 EIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 297
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 127/287 (44%), Gaps = 38/287 (13%)
Query: 3 KKKYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFER--DNSDLSNISREA 60
K+K P+ ++ Y + +G G SV+ + + N VA+K ++ +R D +L N +R
Sbjct: 30 KEKEPLESQ-YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 88
Query: 61 QTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYP-----------DGFE 109
++L+ + S S V W P S + IL+ P +
Sbjct: 89 MEVVLLKK---VSSGFSGVIRLLDWFERP----DSFVLILERPEPVQDLFDFITERGALQ 141
Query: 110 EVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDV-RGAIKLGDFGVSACLFDSGDRQ 168
E + + +VL+ + + H+ G +HRD+K NILID+ RG +KL DFG A L D+
Sbjct: 142 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---- 197
Query: 169 RMRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTL 228
+ F GT + PE + + A +WS GI ++ G PF
Sbjct: 198 -VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD---------- 246
Query: 229 QNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSFFK 275
+ G + R R S + +I CL PS RP+ +++ H + +
Sbjct: 247 EEIIGGQVFFRQR-VSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 292
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 127/287 (44%), Gaps = 38/287 (13%)
Query: 3 KKKYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFER--DNSDLSNISREA 60
K+K P+ ++ Y + +G G SV+ + + N VA+K ++ +R D +L N +R
Sbjct: 29 KEKEPLESQ-YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 87
Query: 61 QTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYP-----------DGFE 109
++L+ + S S V W P S + IL+ P +
Sbjct: 88 MEVVLLKK---VSSGFSGVIRLLDWFERP----DSFVLILERPEPVQDLFDFITERGALQ 140
Query: 110 EVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDV-RGAIKLGDFGVSACLFDSGDRQ 168
E + + +VL+ + + H+ G +HRD+K NILID+ RG +KL DFG A L D+
Sbjct: 141 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---- 196
Query: 169 RMRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTL 228
+ F GT + PE + + A +WS GI ++ G PF
Sbjct: 197 -VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD---------- 245
Query: 229 QNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSFFK 275
+ G + R R S + +I CL PS RP+ +++ H + +
Sbjct: 246 EEIIGGQVFFRQR-VSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 291
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 127/287 (44%), Gaps = 38/287 (13%)
Query: 3 KKKYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFER--DNSDLSNISREA 60
K+K P+ ++ Y + +G G SV+ + + N VA+K ++ +R D +L N +R
Sbjct: 30 KEKEPLESQ-YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 88
Query: 61 QTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYP-----------DGFE 109
++L+ + S S V W P S + IL+ P +
Sbjct: 89 MEVVLLKK---VSSGFSGVIRLLDWFERP----DSFVLILERPEPVQDLFDFITERGALQ 141
Query: 110 EVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDV-RGAIKLGDFGVSACLFDSGDRQ 168
E + + +VL+ + + H+ G +HRD+K NILID+ RG +KL DFG A L D+
Sbjct: 142 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---- 197
Query: 169 RMRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTL 228
+ F GT + PE + + A +WS GI ++ G PF
Sbjct: 198 -VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD---------- 246
Query: 229 QNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSFFK 275
+ G + R R S + +I CL PS RP+ +++ H + +
Sbjct: 247 EEIIGGQVFFRQR-VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 292
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 127/287 (44%), Gaps = 38/287 (13%)
Query: 3 KKKYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFER--DNSDLSNISREA 60
K+K P+ ++ Y + +G G SV+ + + N VA+K ++ +R D +L N +R
Sbjct: 30 KEKEPLESQ-YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 88
Query: 61 QTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYP-----------DGFE 109
++L+ + S S V W P S + IL+ P +
Sbjct: 89 MEVVLLKK---VSSGFSGVIRLLDWFERP----DSFVLILERPEPVQDLFDFITERGALQ 141
Query: 110 EVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDV-RGAIKLGDFGVSACLFDSGDRQ 168
E + + +VL+ + + H+ G +HRD+K NILID+ RG +KL DFG A L D+
Sbjct: 142 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---- 197
Query: 169 RMRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTL 228
+ F GT + PE + + A +WS GI ++ G PF
Sbjct: 198 -VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD---------- 246
Query: 229 QNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSFFK 275
+ G + R R S + +I CL PS RP+ +++ H + +
Sbjct: 247 EEIIGGQVFFRQR-VSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 292
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 127/287 (44%), Gaps = 38/287 (13%)
Query: 3 KKKYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFER--DNSDLSNISREA 60
K+K P+ ++ Y + +G G SV+ + + N VA+K ++ +R D +L N +R
Sbjct: 29 KEKEPLESQ-YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 87
Query: 61 QTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYP-----------DGFE 109
++L+ + S S V W P S + IL+ P +
Sbjct: 88 MEVVLLKK---VSSGFSGVIRLLDWFERP----DSFVLILERPEPVQDLFDFITERGALQ 140
Query: 110 EVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDV-RGAIKLGDFGVSACLFDSGDRQ 168
E + + +VL+ + + H+ G +HRD+K NILID+ RG +KL DFG A L D+
Sbjct: 141 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---- 196
Query: 169 RMRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTL 228
+ F GT + PE + + A +WS GI ++ G PF
Sbjct: 197 -VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD---------- 245
Query: 229 QNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSFFK 275
+ G + R R S + +I CL PS RP+ +++ H + +
Sbjct: 246 EEIIRGQVFFRQR-VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 291
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 127/287 (44%), Gaps = 38/287 (13%)
Query: 3 KKKYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFER--DNSDLSNISREA 60
K+K P+ ++ Y + +G G SV+ + + N VA+K ++ +R D +L N +R
Sbjct: 44 KEKEPLESQ-YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 102
Query: 61 QTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYP-----------DGFE 109
++L+ + S S V W P S + IL+ P +
Sbjct: 103 MEVVLLKK---VSSGFSGVIRLLDWFERP----DSFVLILERPEPVQDLFDFITERGALQ 155
Query: 110 EVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDV-RGAIKLGDFGVSACLFDSGDRQ 168
E + + +VL+ + + H+ G +HRD+K NILID+ RG +KL DFG A L D+
Sbjct: 156 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---- 211
Query: 169 RMRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTL 228
+ F GT + PE + + A +WS GI ++ G PF
Sbjct: 212 -VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD---------- 260
Query: 229 QNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSFFK 275
+ G + R R S + +I CL PS RP+ +++ H + +
Sbjct: 261 EEIIRGQVFFRQR-VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 306
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 127/287 (44%), Gaps = 38/287 (13%)
Query: 3 KKKYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFER--DNSDLSNISREA 60
K+K P+ ++ Y + +G G SV+ + + N VA+K ++ +R D +L N +R
Sbjct: 17 KEKEPLESQ-YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 75
Query: 61 QTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYP-----------DGFE 109
++L+ + S S V W P S + IL+ P +
Sbjct: 76 MEVVLLKK---VSSGFSGVIRLLDWFERP----DSFVLILERPEPVQDLFDFITERGALQ 128
Query: 110 EVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDV-RGAIKLGDFGVSACLFDSGDRQ 168
E + + +VL+ + + H+ G +HRD+K NILID+ RG +KL DFG A L D+
Sbjct: 129 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---- 184
Query: 169 RMRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTL 228
+ F GT + PE + + A +WS GI ++ G PF
Sbjct: 185 -VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD---------- 233
Query: 229 QNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSFFK 275
+ G + R R S + +I CL PS RP+ +++ H + +
Sbjct: 234 EEIIRGQVFFRQR-VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 279
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 127/287 (44%), Gaps = 38/287 (13%)
Query: 3 KKKYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFER--DNSDLSNISREA 60
K+K P+ ++ Y + +G G SV+ + + N VA+K ++ +R D +L N +R
Sbjct: 44 KEKEPLESQ-YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 102
Query: 61 QTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYP-----------DGFE 109
++L+ + S S V W P S + IL+ P +
Sbjct: 103 MEVVLLKK---VSSGFSGVIRLLDWFERP----DSFVLILERPEPVQDLFDFITERGALQ 155
Query: 110 EVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDV-RGAIKLGDFGVSACLFDSGDRQ 168
E + + +VL+ + + H+ G +HRD+K NILID+ RG +KL DFG A L D+
Sbjct: 156 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---- 211
Query: 169 RMRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTL 228
+ F GT + PE + + A +WS GI ++ G PF
Sbjct: 212 -VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD---------- 260
Query: 229 QNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSFFK 275
+ G + R R S + +I CL PS RP+ +++ H + +
Sbjct: 261 EEIIRGQVFFRQR-VSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 306
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 127/287 (44%), Gaps = 38/287 (13%)
Query: 3 KKKYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFER--DNSDLSNISREA 60
K+K P+ ++ Y + +G G SV+ + + N VA+K ++ +R D +L N +R
Sbjct: 16 KEKEPLESQ-YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 74
Query: 61 QTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYP-----------DGFE 109
++L+ + S S V W P S + IL+ P +
Sbjct: 75 MEVVLLKK---VSSGFSGVIRLLDWFERP----DSFVLILERPEPVQDLFDFITERGALQ 127
Query: 110 EVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDV-RGAIKLGDFGVSACLFDSGDRQ 168
E + + +VL+ + + H+ G +HRD+K NILID+ RG +KL DFG A L D+
Sbjct: 128 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---- 183
Query: 169 RMRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTL 228
+ F GT + PE + + A +WS GI ++ G PF
Sbjct: 184 -VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD---------- 232
Query: 229 QNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSFFK 275
+ G + R R S + +I CL PS RP+ +++ H + +
Sbjct: 233 EEIIRGQVFFRQR-VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 278
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 127/287 (44%), Gaps = 38/287 (13%)
Query: 3 KKKYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFER--DNSDLSNISREA 60
K+K P+ ++ Y + +G G SV+ + + N VA+K ++ +R D +L N +R
Sbjct: 2 KEKEPLESQ-YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 60
Query: 61 QTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYP-----------DGFE 109
++L+ + S S V W P S + IL+ P +
Sbjct: 61 MEVVLLKK---VSSGFSGVIRLLDWFERP----DSFVLILERPEPVQDLFDFITERGALQ 113
Query: 110 EVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDV-RGAIKLGDFGVSACLFDSGDRQ 168
E + + +VL+ + + H+ G +HRD+K NILID+ RG +KL DFG A L D+
Sbjct: 114 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---- 169
Query: 169 RMRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTL 228
+ F GT + PE + + A +WS GI ++ G PF
Sbjct: 170 -VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD---------- 218
Query: 229 QNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSFFK 275
+ G + R R S + +I CL PS RP+ +++ H + +
Sbjct: 219 EEIIRGQVFFRQR-VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 264
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 127/287 (44%), Gaps = 38/287 (13%)
Query: 3 KKKYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFER--DNSDLSNISREA 60
K+K P+ ++ Y + +G G SV+ + + N VA+K ++ +R D +L N +R
Sbjct: 16 KEKEPLESQ-YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 74
Query: 61 QTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYP-----------DGFE 109
++L+ + S S V W P S + IL+ P +
Sbjct: 75 MEVVLLKK---VSSGFSGVIRLLDWFERP----DSFVLILERPEPVQDLFDFITERGALQ 127
Query: 110 EVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDV-RGAIKLGDFGVSACLFDSGDRQ 168
E + + +VL+ + + H+ G +HRD+K NILID+ RG +KL DFG A L D+
Sbjct: 128 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---- 183
Query: 169 RMRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTL 228
+ F GT + PE + + A +WS GI ++ G PF
Sbjct: 184 -VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD---------- 232
Query: 229 QNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSFFK 275
+ G + R R S + +I CL PS RP+ +++ H + +
Sbjct: 233 EEIIRGQVFFRQR-VSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 278
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 104/225 (46%), Gaps = 20/225 (8%)
Query: 58 REAQTMILVDHPNVLKSHCSFVSD-HNLWVVMPFMSGGSCLHILKAAYPDGFEEV---VI 113
+E + M H N+++ F SD +L +V +M GS L L DG + +
Sbjct: 79 QEIKVMAKCQHENLVEL-LGFSSDGDDLCLVYVYMPNGSLLDRLSCL--DGTPPLSWHMR 135
Query: 114 ATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNT 173
I + G+++LH + HIHRD+KS NIL+D K+ DFG++ + + M
Sbjct: 136 CKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARA-SEKFAQTVMXXR 194
Query: 174 FVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLL----MTLQ 229
VGT +MAPE + K+DI+SFG+ LE+ G ++ ++LL
Sbjct: 195 IVGTTAYMAPEALRG--EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIED 252
Query: 230 NAPPGLDY------ERDRKFSKSFKQMIASCLVKDPSKRPSAKKL 268
DY + D ++ + + CL + +KRP KK+
Sbjct: 253 EEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKV 297
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 122/272 (44%), Gaps = 28/272 (10%)
Query: 19 VGQGVSASVHRALCIPFNEIVA--VKILDFERDNSDLSN--ISREAQTMILVDHPNV--L 72
+G G +V++ L IP E V V I++ S +N I EA M VD+P+V L
Sbjct: 57 LGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCRL 116
Query: 73 KSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGH 132
C + + +MPF CL + D + ++ KG++YL
Sbjct: 117 LGICLTSTVQLITQLMPF----GCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRL 172
Query: 133 IHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVG-TPC-WMAPEVMEQLH 190
+HRD+ + N+L+ +K+ DFG++ L G ++ + G P WMA E + LH
Sbjct: 173 VHRDLAARNVLVKTPQHVKITDFGLAKLL---GAEEKEYHAEGGKVPIKWMALESI--LH 227
Query: 191 G-YDFKADIWSFGITALEL-AHGHAPFSKYPPMKV--LLMTLQNAPPGLDYERDRKFSKS 246
Y ++D+WS+G+T EL G P+ P ++ +L + P + +
Sbjct: 228 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLP------QPPICTID 281
Query: 247 FKQMIASCLVKDPSKRPSAKKLLKHSFFKQAR 278
++ C + D RP ++L+ F K AR
Sbjct: 282 VYMIMVKCWMIDADSRPKFRELIIE-FSKMAR 312
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 127/287 (44%), Gaps = 38/287 (13%)
Query: 3 KKKYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFER--DNSDLSNISREA 60
K+K P+ ++ Y + +G G SV+ + + N VA+K ++ +R D +L N +R
Sbjct: 49 KEKEPLESQ-YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 107
Query: 61 QTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYP-----------DGFE 109
++L+ + S S V W P S + IL+ P +
Sbjct: 108 MEVVLLKK---VSSGFSGVIRLLDWFERP----DSFVLILERPEPVQDLFDFITERGALQ 160
Query: 110 EVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDV-RGAIKLGDFGVSACLFDSGDRQ 168
E + + +VL+ + + H+ G +HRD+K NILID+ RG +KL DFG A L D+
Sbjct: 161 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---- 216
Query: 169 RMRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTL 228
+ F GT + PE + + A +WS GI ++ G PF
Sbjct: 217 -VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD---------- 265
Query: 229 QNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSFFK 275
+ G + R R S + +I CL PS RP+ +++ H + +
Sbjct: 266 EEIIRGQVFFRQR-VSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 311
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 127/287 (44%), Gaps = 38/287 (13%)
Query: 3 KKKYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFER--DNSDLSNISREA 60
K+K P+ ++ Y + +G G SV+ + + N VA+K ++ +R D +L N +R
Sbjct: 2 KEKEPLESQ-YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 60
Query: 61 QTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYP-----------DGFE 109
++L+ + S S V W P S + IL+ P +
Sbjct: 61 MEVVLLKK---VSSGFSGVIRLLDWFERP----DSFVLILERPEPVQDLFDFITERGALQ 113
Query: 110 EVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDV-RGAIKLGDFGVSACLFDSGDRQ 168
E + + +VL+ + + H+ G +HRD+K NILID+ RG +KL DFG A L D+
Sbjct: 114 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---- 169
Query: 169 RMRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTL 228
+ F GT + PE + + A +WS GI ++ G PF
Sbjct: 170 -VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD---------- 218
Query: 229 QNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSFFK 275
+ G + R R S + +I CL PS RP+ +++ H + +
Sbjct: 219 EEIIRGQVFFRQR-VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 264
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 127/314 (40%), Gaps = 66/314 (21%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKIL--DFERDNSDLSNISREAQTMIL--- 65
+ Y + +G G V C F+ ++ + + R + ++ R + ++L
Sbjct: 22 KRYQQLKPIGSGAQGIV----CAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKC 77
Query: 66 VDHPNVLKSHCSFVSDHNL------WVVMPFMSGGSC--LHILKAAYPDGFEEVVIATIL 117
V+H N++ F L ++VM M C +H+ + ++ +L
Sbjct: 78 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHM-------ELDHERMSYLL 130
Query: 118 REVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGT 177
++L G+ +LH G IHRD+K NI++ +K+ DFG++ + M +V T
Sbjct: 131 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----TASTNFMMTPYVVT 186
Query: 178 PCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFS------------------KYP 219
+ APEV+ + GY DIWS G EL G F
Sbjct: 187 RYYRAPEVILGM-GYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAE 245
Query: 220 PMKVLLMTLQN------APPGLDY-------------ERDRKFSKSFKQMIASCLVKDPS 260
M L T++N A PG+ + ERD+ + + +++ LV DP
Sbjct: 246 FMAALQPTVRNYVENRPAYPGIAFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPD 305
Query: 261 KRPSAKKLLKHSFF 274
KR S + L+H +
Sbjct: 306 KRISVDEALRHPYI 319
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 102/201 (50%), Gaps = 14/201 (6%)
Query: 19 VGQGVSASVHRALCIPFNEIVAVKIL---DFERDNSDLSNISREAQTMILVDHPNVLKSH 75
+G+G +V+ A + IVA+K+L E++ + + RE + + HPN+L+ +
Sbjct: 31 LGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVE-HQLRREIEIQAHLHHPNILRLY 89
Query: 76 CSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHR 135
F +++++ + G L+ + F+E ATI+ E+ L Y H IHR
Sbjct: 90 NYFYDRRRIYLILEYAPRGELYKELQKSC--TFDEQRTATIMEELADALMYCHGKKVIHR 147
Query: 136 DVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVME-QLHGYDF 194
D+K N+L+ ++G +K+ DFG S R T GT ++ PE++E ++H +
Sbjct: 148 DIKPENLLLGLKGELKIADFGWSV-----HAPSLRRKTMCGTLDYLPPEMIEGRMH--NE 200
Query: 195 KADIWSFGITALELAHGHAPF 215
K D+W G+ EL G+ PF
Sbjct: 201 KVDLWCIGVLCYELLVGNPPF 221
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 121/292 (41%), Gaps = 45/292 (15%)
Query: 19 VGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDH---PNVLK-- 73
VG G SV A + VAVK L R L + R + + L+ H NV+
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLS--RPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 74 ---SHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHH 130
+ + + D + ++ + G +I+K+ + + ++ ++L+GL Y+H
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLMGADLNNIVKS---QALSDEHVQFLVYQLLRGLKYIHSA 150
Query: 131 GHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLH 190
G IHRD+K N+ ++ +++ DFG++ D + +V T + APE+M
Sbjct: 151 GIIHRDLKPSNVAVNEDSELRILDFGLAR----QADEE--MTGYVATRWYRAPEIMLNWM 204
Query: 191 GYDFKADIWSFGITALELAHGHA--PFSKYPPMKVLLMTLQNAP-----PGLDYERDRKF 243
Y+ DIWS G EL G A P S Y +M + P + E R +
Sbjct: 205 HYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTY 264
Query: 244 SKSFKQM-------------------IASCLVKDPSKRPSAKKLLKHSFFKQ 276
+S M + LV D +R SA + L H++F Q
Sbjct: 265 IQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQ 316
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 127/287 (44%), Gaps = 38/287 (13%)
Query: 3 KKKYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFER--DNSDLSNISREA 60
K+K P+ ++ Y + +G G SV+ + + N VA+K ++ +R D +L N +R
Sbjct: 17 KEKEPLESQ-YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 75
Query: 61 QTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYP-----------DGFE 109
++L+ + S S V W P S + IL+ P +
Sbjct: 76 MEVVLLKK---VSSGFSGVIRLLDWFERP----DSFVLILERPEPVQDLFDFITERGALQ 128
Query: 110 EVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDV-RGAIKLGDFGVSACLFDSGDRQ 168
E + + +VL+ + + H+ G +HRD+K NILID+ RG +KL DFG A L D+
Sbjct: 129 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---- 184
Query: 169 RMRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTL 228
+ F GT + PE + + A +WS GI ++ G PF
Sbjct: 185 -VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD---------- 233
Query: 229 QNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSFFK 275
+ G + R R S + +I CL PS RP+ +++ H + +
Sbjct: 234 EEIIRGQVFFRQR-VSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 279
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 127/287 (44%), Gaps = 38/287 (13%)
Query: 3 KKKYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFER--DNSDLSNISREA 60
K+K P+ ++ Y + +G G SV+ + + N VA+K ++ +R D +L N +R
Sbjct: 36 KEKEPLESQ-YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 94
Query: 61 QTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYP-----------DGFE 109
++L+ + S S V W P S + IL+ P +
Sbjct: 95 MEVVLLKK---VSSGFSGVIRLLDWFERP----DSFVLILERPEPVQDLFDFITERGALQ 147
Query: 110 EVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDV-RGAIKLGDFGVSACLFDSGDRQ 168
E + + +VL+ + + H+ G +HRD+K NILID+ RG +KL DFG A L D+
Sbjct: 148 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---- 203
Query: 169 RMRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTL 228
+ F GT + PE + + A +WS GI ++ G PF
Sbjct: 204 -VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD---------- 252
Query: 229 QNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSFFK 275
+ G + R R S + +I CL PS RP+ +++ H + +
Sbjct: 253 EEIIRGQVFFRQR-VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 298
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 127/287 (44%), Gaps = 38/287 (13%)
Query: 3 KKKYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFER--DNSDLSNISREA 60
K+K P+ ++ Y + +G G SV+ + + N VA+K ++ +R D +L N +R
Sbjct: 1 KEKEPLESQ-YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 59
Query: 61 QTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYP-----------DGFE 109
++L+ + S S V W P S + IL+ P +
Sbjct: 60 MEVVLLKK---VSSGFSGVIRLLDWFERP----DSFVLILERMEPVQDLFDFITERGALQ 112
Query: 110 EVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDV-RGAIKLGDFGVSACLFDSGDRQ 168
E + + +VL+ + + H+ G +HRD+K NILID+ RG +KL DFG A L D+
Sbjct: 113 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---- 168
Query: 169 RMRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTL 228
+ F GT + PE + + A +WS GI ++ G PF
Sbjct: 169 -VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD---------- 217
Query: 229 QNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSFFK 275
+ G + R R S + +I CL PS RP+ +++ H + +
Sbjct: 218 EEIIRGQVFFRQR-VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 263
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 127/287 (44%), Gaps = 38/287 (13%)
Query: 3 KKKYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFER--DNSDLSNISREA 60
K+K P+ ++ Y + +G G SV+ + + N VA+K ++ +R D +L N +R
Sbjct: 2 KEKEPLESQ-YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 60
Query: 61 QTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYP-----------DGFE 109
++L+ + S S V W P S + IL+ P +
Sbjct: 61 MEVVLLKK---VSSGFSGVIRLLDWFERP----DSFVLILERPEPVQDLFDFITERGALQ 113
Query: 110 EVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDV-RGAIKLGDFGVSACLFDSGDRQ 168
E + + +VL+ + + H+ G +HRD+K NILID+ RG +KL DFG A L D+
Sbjct: 114 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---- 169
Query: 169 RMRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTL 228
+ F GT + PE + + A +WS GI ++ G PF
Sbjct: 170 -VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD---------- 218
Query: 229 QNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSFFK 275
+ G + R R S + +I CL PS RP+ +++ H + +
Sbjct: 219 EEIIRGQVFFRQR-VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 264
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 127/287 (44%), Gaps = 38/287 (13%)
Query: 3 KKKYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFER--DNSDLSNISREA 60
K+K P+ ++ Y + +G G SV+ + + N VA+K ++ +R D +L N +R
Sbjct: 1 KEKEPLESQ-YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 59
Query: 61 QTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYP-----------DGFE 109
++L+ + S S V W P S + IL+ P +
Sbjct: 60 MEVVLLKK---VSSGFSGVIRLLDWFERP----DSFVLILERPEPVQDLFDFITERGALQ 112
Query: 110 EVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDV-RGAIKLGDFGVSACLFDSGDRQ 168
E + + +VL+ + + H+ G +HRD+K NILID+ RG +KL DFG A L D+
Sbjct: 113 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---- 168
Query: 169 RMRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTL 228
+ F GT + PE + + A +WS GI ++ G PF
Sbjct: 169 -VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD---------- 217
Query: 229 QNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSFFK 275
+ G + R R S + +I CL PS RP+ +++ H + +
Sbjct: 218 EEIIRGQVFFRQR-VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 263
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 124/288 (43%), Gaps = 58/288 (20%)
Query: 3 KKKYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDL-SNISREAQ 61
K K+ + E L E++G+G V N +VAVK E DL + +EA+
Sbjct: 106 KDKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCR-ETLPPDLKAKFLQEAR 164
Query: 62 TMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREV- 120
+ HPN+++ +++VM + GG L L+ +G + + T+L+ V
Sbjct: 165 ILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRT---EG-ARLRVKTLLQMVG 220
Query: 121 --LKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFD------SGDRQRMRN 172
G++YL IHRD+ + N L+ + +K+ DFG+S D G RQ
Sbjct: 221 DAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQ---- 276
Query: 173 TFVGTPC-WMAPEVMEQLHG-YDFKADIWSFGITALE-LAHGHAPFSKYPPMKVLLMTLQ 229
P W APE + +G Y ++D+WSFGI E + G +P+
Sbjct: 277 ----VPVKWTAPEALN--YGRYSSESDVWSFGILLWETFSLGASPY-------------- 316
Query: 230 NAPPGLDYERDRKFSK-------------SFKQMIASCLVKDPSKRPS 264
P L ++ R+F + + +++ C +P +RPS
Sbjct: 317 ---PNLSNQQTREFVEKGGRLPCPELCPDAVFRLMEQCWAYEPGQRPS 361
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 124/288 (43%), Gaps = 58/288 (20%)
Query: 3 KKKYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDL-SNISREAQ 61
K K+ + E L E++G+G V N +VAVK E DL + +EA+
Sbjct: 106 KDKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCR-ETLPPDLKAKFLQEAR 164
Query: 62 TMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREV- 120
+ HPN+++ +++VM + GG L L+ +G + + T+L+ V
Sbjct: 165 ILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRT---EG-ARLRVKTLLQMVG 220
Query: 121 --LKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFD------SGDRQRMRN 172
G++YL IHRD+ + N L+ + +K+ DFG+S D G RQ
Sbjct: 221 DAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQ---- 276
Query: 173 TFVGTPC-WMAPEVMEQLHG-YDFKADIWSFGITALE-LAHGHAPFSKYPPMKVLLMTLQ 229
P W APE + +G Y ++D+WSFGI E + G +P+
Sbjct: 277 ----VPVKWTAPEALN--YGRYSSESDVWSFGILLWETFSLGASPY-------------- 316
Query: 230 NAPPGLDYERDRKFSK-------------SFKQMIASCLVKDPSKRPS 264
P L ++ R+F + + +++ C +P +RPS
Sbjct: 317 ---PNLSNQQTREFVEKGGRLPCPELCPDAVFRLMEQCWAYEPGQRPS 361
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 85/187 (45%), Gaps = 14/187 (7%)
Query: 84 LWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNIL 143
L++ M F G+ ++ + ++V+ + ++ KG+DY+H IHRD+K NI
Sbjct: 109 LFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIF 168
Query: 144 IDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGI 203
+ +K+GDFG+ L + G R R + GT +M+PE + Y + D+++ G+
Sbjct: 169 LVDTKQVKIGDFGLVTSLKNDGKRTRSK----GTLRYMSPEQISS-QDYGKEVDLYALGL 223
Query: 204 TALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRP 263
EL H + + K + F K K ++ L K P RP
Sbjct: 224 ILAELLH--VCDTAFETSKFFTDLRDGIISDI-------FDKKEKTLLQKLLSKKPEDRP 274
Query: 264 SAKKLLK 270
+ ++L+
Sbjct: 275 NTSEILR 281
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 106/223 (47%), Gaps = 24/223 (10%)
Query: 13 YTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPNVL 72
+ L + +GQG +A+V R ++ A+K+ + + RE + + ++H N++
Sbjct: 11 WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIV 70
Query: 73 KSHC---SFVSDHNLWVVMPFMSGGSCLHILKA---AYPDGFEEVVIATILREVLKGLDY 126
K + H + ++M F GS +L+ AY G E +LR+V+ G+++
Sbjct: 71 KLFAIEEETTTRHKV-LIMEFCPCGSLYTVLEEPSNAY--GLPESEFLIVLRDVVGGMNH 127
Query: 127 LHHHGHIHRDVKSGNILI----DVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMA 182
L +G +HR++K GNI+ D + KL DFG + L D D Q + + GT ++
Sbjct: 128 LRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED--DEQFV--SLYGTEEYLH 183
Query: 183 PEVMEQL-------HGYDFKADIWSFGITALELAHGHAPFSKY 218
P++ E+ Y D+WS G+T A G PF +
Sbjct: 184 PDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPF 226
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 104/225 (46%), Gaps = 20/225 (8%)
Query: 58 REAQTMILVDHPNVLKSHCSFVSD-HNLWVVMPFMSGGSCLHILKAAYPDGFEEV---VI 113
+E + M H N+++ F SD +L +V +M GS L L DG + +
Sbjct: 73 QEIKVMAKCQHENLVEL-LGFSSDGDDLCLVYVYMPNGSLLDRLSCL--DGTPPLSWHMR 129
Query: 114 ATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNT 173
I + G+++LH + HIHRD+KS NIL+D K+ DFG++ + + M
Sbjct: 130 CKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARA-SEKFAQXVMXXR 188
Query: 174 FVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLL----MTLQ 229
VGT +MAPE + K+DI+SFG+ LE+ G ++ ++LL
Sbjct: 189 IVGTTAYMAPEALRG--EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIED 246
Query: 230 NAPPGLDY------ERDRKFSKSFKQMIASCLVKDPSKRPSAKKL 268
DY + D ++ + + CL + +KRP KK+
Sbjct: 247 EEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKV 291
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 127/287 (44%), Gaps = 38/287 (13%)
Query: 3 KKKYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFER--DNSDLSNISREA 60
K+K P+ ++ Y + +G G SV+ + + N VA+K ++ +R D +L N +R
Sbjct: 24 KEKEPLESQ-YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 82
Query: 61 QTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYP-----------DGFE 109
++L+ + S S V W P S + IL+ P +
Sbjct: 83 MEVVLLKK---VSSGFSGVIRLLDWFERP----DSFVLILERPEPVQDLFDFITERGALQ 135
Query: 110 EVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDV-RGAIKLGDFGVSACLFDSGDRQ 168
E + + +VL+ + + H+ G +HRD+K NILID+ RG +KL DFG A L D+
Sbjct: 136 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---- 191
Query: 169 RMRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTL 228
+ F GT + PE + + A +WS GI ++ G PF
Sbjct: 192 -VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD---------- 240
Query: 229 QNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSFFK 275
+ G + R R S + +I CL PS RP+ +++ H + +
Sbjct: 241 EEIIRGQVFFRQR-VSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 286
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 106/232 (45%), Gaps = 15/232 (6%)
Query: 53 LSNISREAQTMILVD-HPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPD-GFEE 110
S RE Q + D HPNV++ C+ ++ + + ++ + + G E
Sbjct: 61 FSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEP 120
Query: 111 VVIATILREVLKGLDYLHHHGHIHRDVKSGNILI---DVRGAIK--LGDFGVSACLFDSG 165
+ T+L++ GL +LH +HRD+K NILI + G IK + DFG+ L
Sbjct: 121 I---TLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGR 177
Query: 166 DRQRMRNTFVGTPCWMAPEVMEQ--LHGYDFKADIWSFG-ITALELAHGHAPFSKYPPMK 222
R+ GT W+APE++ + + DI+S G + ++ G PF K +
Sbjct: 178 HSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQ 237
Query: 223 VLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSFF 274
++ + L E+ +++I + DP KRPSAK +LKH FF
Sbjct: 238 ANILLGACSLDCLHPEKHEDVIA--RELIEKMIAMDPQKRPSAKHVLKHPFF 287
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 120/292 (41%), Gaps = 45/292 (15%)
Query: 19 VGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDH---PNVLK-- 73
VG G SV A + VAVK L R L + R + + L+ H NV+
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLS--RPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 74 ---SHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHH 130
+ + + D + ++ + G +I+K + + ++ ++L+GL Y+H
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLMGADLNNIVKC---QALSDEHVQFLVYQLLRGLKYIHSA 150
Query: 131 GHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLH 190
G IHRD+K N+ ++ +++ DFG++ D + +V T + APE+M
Sbjct: 151 GIIHRDLKPSNVAVNEDSELRILDFGLAR----QADEE--MTGYVATRWYRAPEIMLNWM 204
Query: 191 GYDFKADIWSFGITALELAHGHA--PFSKYPPMKVLLMTLQNAP-----PGLDYERDRKF 243
Y+ DIWS G EL G A P S Y +M + P + E R +
Sbjct: 205 HYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTY 264
Query: 244 SKSFKQM-------------------IASCLVKDPSKRPSAKKLLKHSFFKQ 276
+S M + LV D +R SA + L H++F Q
Sbjct: 265 IQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQ 316
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 124/285 (43%), Gaps = 29/285 (10%)
Query: 3 KKKYPIGAEHYTLYE-EVGQGVSASVHRALCIPFNEIVAVKIL---DFERDNS---DLSN 55
K + P A++ YE ++G+G VH+ + +VA+K L D E +
Sbjct: 10 KSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQE 69
Query: 56 ISREAQTMILVDHPNVLKSHCSFVSDHNL-WVVMPFMSGGSCLH-ILKAAYPDGFEEVVI 113
RE M ++HPN++K + HN +VM F+ G H +L A+P + V
Sbjct: 70 FQREVFIMSNLNHPNIVKLYGLM---HNPPRMVMEFVPCGDLYHRLLDKAHPIKWS--VK 124
Query: 114 ATILREVLKGLDYLHHHGH--IHRDVKSGNILI-----DVRGAIKLGDFGVSACLFDSGD 166
++ ++ G++Y+ + +HRD++S NI + + K+ DF +S S
Sbjct: 125 LRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHS-- 182
Query: 167 RQRMRNTFVGTPCWMAPEVM-EQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLL 225
+ +G WMAPE + + Y KAD +SF + + G PF +Y K+
Sbjct: 183 ----VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKF 238
Query: 226 MTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLK 270
+ + GL + +I C DP KRP ++K
Sbjct: 239 INMIRE-EGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVK 282
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 127/316 (40%), Gaps = 70/316 (22%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKIL--DFERDNSDLSNISREAQTMIL--- 65
+ Y + +G G V C F+ ++ + + R + ++ R + ++L
Sbjct: 24 KRYQQLKPIGSGAQGIV----CAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKC 79
Query: 66 VDHPNVLKSHCSFVSDHNL------WVVMPFMSGGSC--LHILKAAYPDGFEEVVIATIL 117
V+H N++ F L ++VM M C +H+ + ++ +L
Sbjct: 80 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHM-------ELDHERMSYLL 132
Query: 118 REVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGV--SACLFDSGDRQRMRNTFV 175
++L G+ +LH G IHRD+K NI++ +K+ DFG+ +AC M +V
Sbjct: 133 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAC------TNFMMTPYV 186
Query: 176 GTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKY--------------PPM 221
T + APEV+ + GY DIWS G EL G F P
Sbjct: 187 VTRYYRAPEVILGM-GYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPS 245
Query: 222 KVLLMTLQ--------NAP--PGLDY-------------ERDRKFSKSFKQMIASCLVKD 258
+ LQ N P PG+ + ERD+ + + +++ LV D
Sbjct: 246 AEFMAALQPTVRNYVENRPKYPGIKFEELFPDWIFPSESERDKIKTSQARDLLSKMLVID 305
Query: 259 PSKRPSAKKLLKHSFF 274
P KR S + L+H +
Sbjct: 306 PDKRISVDEALRHPYI 321
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 105/223 (47%), Gaps = 24/223 (10%)
Query: 13 YTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPNVL 72
+ L + +GQG +A+V R ++ A+K+ + + RE + + ++H N++
Sbjct: 11 WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIV 70
Query: 73 KSHC---SFVSDHNLWVVMPFMSGGSCLHILKA---AYPDGFEEVVIATILREVLKGLDY 126
K + H + ++M F GS +L+ AY G E +LR+V+ G+++
Sbjct: 71 KLFAIEEETTTRHKV-LIMEFCPCGSLYTVLEEPSNAY--GLPESEFLIVLRDVVGGMNH 127
Query: 127 LHHHGHIHRDVKSGNILI----DVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMA 182
L +G +HR++K GNI+ D + KL DFG + L D D Q + GT ++
Sbjct: 128 LRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED--DEQFV--XLYGTEEYLH 183
Query: 183 PEVMEQL-------HGYDFKADIWSFGITALELAHGHAPFSKY 218
P++ E+ Y D+WS G+T A G PF +
Sbjct: 184 PDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPF 226
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 96/209 (45%), Gaps = 13/209 (6%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPN 70
E Y +++G+G A+V++ + +VA+K + E + RE + + H N
Sbjct: 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHAN 61
Query: 71 VLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVV----IATILREVLKGLDY 126
++ H ++ +L +V ++ LK Y D ++ + L ++L+GL Y
Sbjct: 62 IVTLHDIIHTEKSLTLVFEYLDKD-----LKQ-YLDDCGNIINMHNVKLFLFQLLRGLAY 115
Query: 127 LHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVM 186
H +HRD+K N+LI+ RG +KL DFG++ + + V T + P+++
Sbjct: 116 CHRQKVLHRDLKPQNLLINERGELKLADFGLARA---KSIPTKTYDNEVVTLWYRPPDIL 172
Query: 187 EQLHGYDFKADIWSFGITALELAHGHAPF 215
Y + D+W G E+A G F
Sbjct: 173 LGSTDYSTQIDMWGVGCIFYEMATGRPLF 201
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 91/191 (47%), Gaps = 6/191 (3%)
Query: 40 AVKILDFERDNSDLSNISREAQTMILVDHPNVLKS-HCSFVSDHNLWVVMPFMSGGSCLH 98
AVK L+ D ++S E M HPNVL S+ + VV+P+M G +
Sbjct: 61 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 120
Query: 99 ILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVS 158
++ + + +I L +V KG+ YL +HRD+ + N ++D + +K+ DFG++
Sbjct: 121 FIRNETHNPTVKDLIGFGL-QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLA 179
Query: 159 ACLFDSGDRQRMRNTFVGTPC-WMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSK 217
++D T P WMA E + Q + K+D+WSFG+ EL AP
Sbjct: 180 RDMYDKEXXSVHNKTGAKLPVKWMALESL-QTQKFTTKSDVWSFGVLLWELMTRGAP--P 236
Query: 218 YPPMKVLLMTL 228
YP + +T+
Sbjct: 237 YPDVNTFDITV 247
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 128/280 (45%), Gaps = 29/280 (10%)
Query: 13 YTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFER-DNSDLSNISRE-AQTMILVDHPN 70
Y++ +++G G S+ V + L +I A+K ++ E DN L + E A L H +
Sbjct: 58 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 116
Query: 71 -VLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHH 129
+++ + ++D +++VM + + K D +E + + +L+ + +H
Sbjct: 117 KIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWER---KSYWKNMLEAVHTIHQ 173
Query: 130 HGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQL 189
HG +H D+K N LI V G +KL DFG+ A ++++ VG +M PE ++ +
Sbjct: 174 HGIVHSDLKPANFLI-VDGMLKLIDFGI-ANQMQPDTTSVVKDSQVGAVNYMPPEAIKDM 231
Query: 190 HG----------YDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYER 239
K+D+WS G + +G PF + ++ + +D
Sbjct: 232 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ------IINQISKLHAIIDPNH 285
Query: 240 DRKF----SKSFKQMIASCLVKDPSKRPSAKKLLKHSFFK 275
+ +F K + ++ CL +DP +R S +LL H + +
Sbjct: 286 EIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 325
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 121/272 (44%), Gaps = 28/272 (10%)
Query: 19 VGQGVSASVHRALCIPFNEIVA--VKILDFERDNSDLSN--ISREAQTMILVDHPNV--L 72
+G G +V++ L IP E V V I + S +N I EA M VD+P+V L
Sbjct: 27 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 86
Query: 73 KSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGH 132
C + + +MPF CL + D + ++ KG++YL
Sbjct: 87 LGICLTSTVQLIMQLMPF----GCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRL 142
Query: 133 IHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVG-TPC-WMAPEVMEQLH 190
+HRD+ + N+L+ +K+ DFG++ L G ++ + G P WMA E + LH
Sbjct: 143 VHRDLAARNVLVKTPQHVKITDFGLAKLL---GAEEKEYHAEGGKVPIKWMALESI--LH 197
Query: 191 G-YDFKADIWSFGITALEL-AHGHAPFSKYPPMKV--LLMTLQNAPPGLDYERDRKFSKS 246
Y ++D+WS+G+T EL G P+ P ++ +L + P + +
Sbjct: 198 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLP------QPPICTID 251
Query: 247 FKQMIASCLVKDPSKRPSAKKLLKHSFFKQAR 278
++ C + D RP ++L+ F K AR
Sbjct: 252 VYMIMVKCWMIDADSRPKFRELIIE-FSKMAR 282
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 102/225 (45%), Gaps = 26/225 (11%)
Query: 13 YTLYEEVGQGVSASVHRALCIPFNEIVAVK-ILDFERDNSDLSNISREAQTMI-LVDHPN 70
Y L +++G+G V +++ E+VAVK I D ++++D RE + L H N
Sbjct: 11 YELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHEN 70
Query: 71 VLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHH 130
++ +D++ V + F + LH + A + E V ++ +++K + YLH
Sbjct: 71 IVNLLNVLRADNDRDVYLVFDYMETDLHAVIRA--NILEPVHKQYVVYQLIKVIKYLHSG 128
Query: 131 GHIHRDVKSGNILIDVRGAIKLGDFGVSACL--------------------FDSGDRQRM 170
G +HRD+K NIL++ +K+ DFG+S FD D Q +
Sbjct: 129 GLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFD--DDQPI 186
Query: 171 RNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPF 215
+V T + APE++ Y D+WS G E+ G F
Sbjct: 187 LTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIF 231
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 121/272 (44%), Gaps = 28/272 (10%)
Query: 19 VGQGVSASVHRALCIPFNEIVA--VKILDFERDNSDLSN--ISREAQTMILVDHPNV--L 72
+G G +V++ L IP E V V I + S +N I EA M VD+P+V L
Sbjct: 24 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 83
Query: 73 KSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGH 132
C + + +MPF CL + D + ++ KG++YL
Sbjct: 84 LGICLTSTVQLIMQLMPF----GCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRL 139
Query: 133 IHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVG-TPC-WMAPEVMEQLH 190
+HRD+ + N+L+ +K+ DFG++ L G ++ + G P WMA E + LH
Sbjct: 140 VHRDLAARNVLVKTPQHVKITDFGLAKLL---GAEEKEYHAEGGKVPIKWMALESI--LH 194
Query: 191 G-YDFKADIWSFGITALEL-AHGHAPFSKYPPMKV--LLMTLQNAPPGLDYERDRKFSKS 246
Y ++D+WS+G+T EL G P+ P ++ +L + P + +
Sbjct: 195 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLP------QPPICTID 248
Query: 247 FKQMIASCLVKDPSKRPSAKKLLKHSFFKQAR 278
++ C + D RP ++L+ F K AR
Sbjct: 249 VYMIMVKCWMIDADSRPKFRELII-EFSKMAR 279
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 121/272 (44%), Gaps = 28/272 (10%)
Query: 19 VGQGVSASVHRALCIPFNEIVA--VKILDFERDNSDLSN--ISREAQTMILVDHPNV--L 72
+G G +V++ L IP E V V I + S +N I EA M VD+P+V L
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 73 KSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGH 132
C + + +MPF CL + D + ++ KG++YL
Sbjct: 86 LGICLTSTVQLIMQLMPF----GCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRL 141
Query: 133 IHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVG-TPC-WMAPEVMEQLH 190
+HRD+ + N+L+ +K+ DFG++ L G ++ + G P WMA E + LH
Sbjct: 142 VHRDLAARNVLVKTPQHVKITDFGLAKLL---GAEEKEYHAEGGKVPIKWMALESI--LH 196
Query: 191 G-YDFKADIWSFGITALEL-AHGHAPFSKYPPMKV--LLMTLQNAPPGLDYERDRKFSKS 246
Y ++D+WS+G+T EL G P+ P ++ +L + P + +
Sbjct: 197 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLP------QPPICTID 250
Query: 247 FKQMIASCLVKDPSKRPSAKKLLKHSFFKQAR 278
++ C + D RP ++L+ F K AR
Sbjct: 251 VYMIMVKCWMIDADSRPKFRELII-EFSKMAR 281
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 126/287 (43%), Gaps = 38/287 (13%)
Query: 3 KKKYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFER--DNSDLSNISREA 60
K+K P+ ++ Y + +G G SV+ + + N VA+K ++ +R D +L N +R
Sbjct: 17 KEKEPLESQ-YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 75
Query: 61 QTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYP-----------DGFE 109
++L+ + S S V W P S + IL+ P +
Sbjct: 76 MEVVLLKK---VSSGFSGVIRLLDWFERP----DSFVLILERPEPVQDLFDFITERGALQ 128
Query: 110 EVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDV-RGAIKLGDFGVSACLFDSGDRQ 168
E + + +VL+ + + H+ G +HRD+K NILID+ RG +KL DFG A L D+
Sbjct: 129 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---- 184
Query: 169 RMRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTL 228
+ F GT + PE + + A +WS GI ++ G PF
Sbjct: 185 -VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD---------- 233
Query: 229 QNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSFFK 275
+ G + R R S + +I CL P RP+ +++ H + +
Sbjct: 234 EEIIRGQVFFRQR-VSXECQHLIRWCLALRPXDRPTFEEIQNHPWMQ 279
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 121/272 (44%), Gaps = 28/272 (10%)
Query: 19 VGQGVSASVHRALCIPFNEIVA--VKILDFERDNSDLSN--ISREAQTMILVDHPNV--L 72
+G G +V++ L IP E V V I + S +N I EA M VD+P+V L
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 73 KSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGH 132
C + + +MPF CL + D + ++ KG++YL
Sbjct: 85 LGICLTSTVQLIMQLMPF----GCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRL 140
Query: 133 IHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVG-TPC-WMAPEVMEQLH 190
+HRD+ + N+L+ +K+ DFG++ L G ++ + G P WMA E + LH
Sbjct: 141 VHRDLAARNVLVKTPQHVKITDFGLAKLL---GAEEKEYHAEGGKVPIKWMALESI--LH 195
Query: 191 G-YDFKADIWSFGITALEL-AHGHAPFSKYPPMKV--LLMTLQNAPPGLDYERDRKFSKS 246
Y ++D+WS+G+T EL G P+ P ++ +L + P + +
Sbjct: 196 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLP------QPPICTID 249
Query: 247 FKQMIASCLVKDPSKRPSAKKLLKHSFFKQAR 278
++ C + D RP ++L+ F K AR
Sbjct: 250 VYMIMVKCWMIDADSRPKFRELII-EFSKMAR 280
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 80/180 (44%), Gaps = 24/180 (13%)
Query: 103 AYPDGFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLF 162
A+ E + LR+ L L +LH G +H DVK NI + RG KLGDFG+ L
Sbjct: 149 AWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELG 208
Query: 163 DSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELA------HGHAPFS 216
+G + G P +MAPE+++ Y AD++S G+T LE+A HG +
Sbjct: 209 TAGAGEVQE----GDPRYMAPELLQ--GSYGTAADVFSLGLTILEVACNMELPHGGEGWQ 262
Query: 217 KYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSFFKQ 276
+ + PP E S + ++ L DP R +A+ LL +Q
Sbjct: 263 Q--------LRQGYLPP----EFTAGLSSELRSVLVMMLEPDPKLRATAEALLALPVLRQ 310
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 121/272 (44%), Gaps = 28/272 (10%)
Query: 19 VGQGVSASVHRALCIPFNEIVA--VKILDFERDNSDLSN--ISREAQTMILVDHPNV--L 72
+G G +V++ L IP E V V I + S +N I EA M VD+P+V L
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 73 KSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGH 132
C + + +MPF CL + D + ++ KG++YL
Sbjct: 83 LGICLTSTVQLIMQLMPF----GCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRL 138
Query: 133 IHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVG-TPC-WMAPEVMEQLH 190
+HRD+ + N+L+ +K+ DFG++ L G ++ + G P WMA E + LH
Sbjct: 139 VHRDLAARNVLVKTPQHVKITDFGLAKLL---GAEEKEYHAEGGKVPIKWMALESI--LH 193
Query: 191 G-YDFKADIWSFGITALEL-AHGHAPFSKYPPMKV--LLMTLQNAPPGLDYERDRKFSKS 246
Y ++D+WS+G+T EL G P+ P ++ +L + P + +
Sbjct: 194 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLP------QPPICTID 247
Query: 247 FKQMIASCLVKDPSKRPSAKKLLKHSFFKQAR 278
++ C + D RP ++L+ F K AR
Sbjct: 248 VYMIMVKCWMIDADSRPKFRELII-EFSKMAR 278
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 120/292 (41%), Gaps = 45/292 (15%)
Query: 19 VGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDH---PNVLK-- 73
VG G SV A + VAVK L R L + R + + L+ H NV+
Sbjct: 28 VGSGAYGSVCSAYDARLRQKVAVKKLS--RPFQSLIHARRTYRELRLLKHLKHENVIGLL 85
Query: 74 ---SHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHH 130
+ + + D + ++ + G +I+K + + ++ ++L+GL Y+H
Sbjct: 86 DVFTPATSIEDFSEVYLVTTLMGADLNNIVKC---QALSDEHVQFLVYQLLRGLKYIHSA 142
Query: 131 GHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLH 190
G IHRD+K N+ ++ +++ DFG++ D + +V T + APE+M
Sbjct: 143 GIIHRDLKPSNVAVNEDCELRILDFGLAR----QADEE--MTGYVATRWYRAPEIMLNWM 196
Query: 191 GYDFKADIWSFGITALELAHGHA--PFSKYPPMKVLLMTLQNAP-----PGLDYERDRKF 243
Y+ DIWS G EL G A P S Y +M + P + E R +
Sbjct: 197 HYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTY 256
Query: 244 SKSFKQM-------------------IASCLVKDPSKRPSAKKLLKHSFFKQ 276
+S M + LV D +R SA + L H++F Q
Sbjct: 257 IQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQ 308
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 125/303 (41%), Gaps = 45/303 (14%)
Query: 13 YTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDL--SNISREAQTMILVDHPN 70
Y + VG G +V A+ VA+K L + S+L RE + + + H N
Sbjct: 27 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKL-YRPFQSELFAKRAYRELRLLKHMRHEN 85
Query: 71 VLKSHCSFVSDHNL------WVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGL 124
V+ F D L ++VMPFM G ++K + E I ++ ++LKGL
Sbjct: 86 VIGLLDVFTPDETLDDFTDFYLVMPFM-GTDLGKLMKH---EKLGEDRIQFLVYQMLKGL 141
Query: 125 DYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPE 184
Y+H G IHRD+K GN+ ++ +K+ DFG++ D + M V T + APE
Sbjct: 142 RYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLAR----QADSE-MXGXVV-TRWYRAPE 195
Query: 185 VMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVL--LMTLQNAPPG-----LDY 237
V+ Y DIWS G E+ G F + L +M + PP L
Sbjct: 196 VILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQS 255
Query: 238 ERDRKFSKSFKQ-------------------MIASCLVKDPSKRPSAKKLLKHSFFKQAR 278
+ + + K + ++ LV D +R +A + L H +F+
Sbjct: 256 DEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLH 315
Query: 279 SNE 281
E
Sbjct: 316 DTE 318
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 121/272 (44%), Gaps = 28/272 (10%)
Query: 19 VGQGVSASVHRALCIPFNEIVA--VKILDFERDNSDLSN--ISREAQTMILVDHPNV--L 72
+G G +V++ L IP E V V I + S +N I EA M VD+P+V L
Sbjct: 48 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 107
Query: 73 KSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGH 132
C + + +MPF CL + D + ++ KG++YL
Sbjct: 108 LGICLTSTVQLITQLMPF----GCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRL 163
Query: 133 IHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVG-TPC-WMAPEVMEQLH 190
+HRD+ + N+L+ +K+ DFG++ L G ++ + G P WMA E + LH
Sbjct: 164 VHRDLAARNVLVKTPQHVKITDFGLAKLL---GAEEKEYHAEGGKVPIKWMALESI--LH 218
Query: 191 G-YDFKADIWSFGITALEL-AHGHAPFSKYPPMKV--LLMTLQNAPPGLDYERDRKFSKS 246
Y ++D+WS+G+T EL G P+ P ++ +L + P + +
Sbjct: 219 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLP------QPPICTID 272
Query: 247 FKQMIASCLVKDPSKRPSAKKLLKHSFFKQAR 278
++ C + D RP ++L+ F K AR
Sbjct: 273 VYMIMVKCWMIDADSRPKFRELII-EFSKMAR 303
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 121/272 (44%), Gaps = 28/272 (10%)
Query: 19 VGQGVSASVHRALCIPFNEIVA--VKILDFERDNSDLSN--ISREAQTMILVDHPNV--L 72
+G G +V++ L IP E V V I + S +N I EA M VD+P+V L
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 73 KSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGH 132
C + + +MPF CL + D + ++ KG++YL
Sbjct: 85 LGICLTSTVQLITQLMPF----GCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRL 140
Query: 133 IHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVG-TPC-WMAPEVMEQLH 190
+HRD+ + N+L+ +K+ DFG++ L G ++ + G P WMA E + LH
Sbjct: 141 VHRDLAARNVLVKTPQHVKITDFGLAKLL---GAEEKEYHAEGGKVPIKWMALESI--LH 195
Query: 191 G-YDFKADIWSFGITALEL-AHGHAPFSKYPPMKV--LLMTLQNAPPGLDYERDRKFSKS 246
Y ++D+WS+G+T EL G P+ P ++ +L + P + +
Sbjct: 196 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLP------QPPICTID 249
Query: 247 FKQMIASCLVKDPSKRPSAKKLLKHSFFKQAR 278
++ C + D RP ++L+ F K AR
Sbjct: 250 VYMIMVKCWMIDADSRPKFRELII-EFSKMAR 280
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 121/272 (44%), Gaps = 28/272 (10%)
Query: 19 VGQGVSASVHRALCIPFNEIVA--VKILDFERDNSDLSN--ISREAQTMILVDHPNV--L 72
+G G +V++ L IP E V V I + S +N I EA M VD+P+V L
Sbjct: 30 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 73 KSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGH 132
C + + +MPF CL + D + ++ KG++YL
Sbjct: 90 LGICLTSTVQLITQLMPF----GCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRL 145
Query: 133 IHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVG-TPC-WMAPEVMEQLH 190
+HRD+ + N+L+ +K+ DFG++ L G ++ + G P WMA E + LH
Sbjct: 146 VHRDLAARNVLVKTPQHVKITDFGLAKLL---GAEEKEYHAEGGKVPIKWMALESI--LH 200
Query: 191 G-YDFKADIWSFGITALEL-AHGHAPFSKYPPMKV--LLMTLQNAPPGLDYERDRKFSKS 246
Y ++D+WS+G+T EL G P+ P ++ +L + P + +
Sbjct: 201 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLP------QPPICTID 254
Query: 247 FKQMIASCLVKDPSKRPSAKKLLKHSFFKQAR 278
++ C + D RP ++L+ F K AR
Sbjct: 255 VYMIMVKCWMIDADSRPKFRELII-EFSKMAR 285
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 19/211 (9%)
Query: 19 VGQGVSASVHRALCIPFNEIVA--VKILDFERDNSDLSN--ISREAQTMILVDHPNV--L 72
+G G +V++ L IP E V V I + S +N I EA M VD+P+V L
Sbjct: 33 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 92
Query: 73 KSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGH 132
C + + +MPF CL + D + ++ KG++YL
Sbjct: 93 LGICLTSTVQLITQLMPF----GCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRL 148
Query: 133 IHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVG-TPC-WMAPEVMEQLH 190
+HRD+ + N+L+ +K+ DFG++ L G ++ + G P WMA E + LH
Sbjct: 149 VHRDLAARNVLVKTPQHVKITDFGLAKLL---GAEEKEYHAEGGKVPIKWMALESI--LH 203
Query: 191 G-YDFKADIWSFGITALEL-AHGHAPFSKYP 219
Y ++D+WS+G+T EL G P+ P
Sbjct: 204 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 234
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 121/272 (44%), Gaps = 28/272 (10%)
Query: 19 VGQGVSASVHRALCIPFNEIVA--VKILDFERDNSDLSN--ISREAQTMILVDHPNV--L 72
+G G +V++ L IP E V V I + S +N I EA M VD+P+V L
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 73 KSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGH 132
C + + +MPF CL + D + ++ KG++YL
Sbjct: 86 LGICLTSTVQLITQLMPF----GCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRL 141
Query: 133 IHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVG-TPC-WMAPEVMEQLH 190
+HRD+ + N+L+ +K+ DFG++ L G ++ + G P WMA E + LH
Sbjct: 142 VHRDLAARNVLVKTPQHVKITDFGLAKLL---GAEEKEYHAEGGKVPIKWMALESI--LH 196
Query: 191 G-YDFKADIWSFGITALEL-AHGHAPFSKYPPMKV--LLMTLQNAPPGLDYERDRKFSKS 246
Y ++D+WS+G+T EL G P+ P ++ +L + P + +
Sbjct: 197 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLP------QPPICTID 250
Query: 247 FKQMIASCLVKDPSKRPSAKKLLKHSFFKQAR 278
++ C + D RP ++L+ F K AR
Sbjct: 251 VYMIMVKCWMIDADSRPKFRELII-EFSKMAR 281
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 121/272 (44%), Gaps = 28/272 (10%)
Query: 19 VGQGVSASVHRALCIPFNEIVA--VKILDFERDNSDLSN--ISREAQTMILVDHPNV--L 72
+G G +V++ L IP E V V I + S +N I EA M VD+P+V L
Sbjct: 29 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 88
Query: 73 KSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGH 132
C + + +MPF CL + D + ++ KG++YL
Sbjct: 89 LGICLTSTVQLITQLMPF----GCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRL 144
Query: 133 IHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVG-TPC-WMAPEVMEQLH 190
+HRD+ + N+L+ +K+ DFG++ L G ++ + G P WMA E + LH
Sbjct: 145 VHRDLAARNVLVKTPQHVKITDFGLAKLL---GAEEKEYHAEGGKVPIKWMALESI--LH 199
Query: 191 G-YDFKADIWSFGITALEL-AHGHAPFSKYPPMKV--LLMTLQNAPPGLDYERDRKFSKS 246
Y ++D+WS+G+T EL G P+ P ++ +L + P + +
Sbjct: 200 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLP------QPPICTID 253
Query: 247 FKQMIASCLVKDPSKRPSAKKLLKHSFFKQAR 278
++ C + D RP ++L+ F K AR
Sbjct: 254 VYMIMVKCWMIDADSRPKFRELII-EFSKMAR 284
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 91/191 (47%), Gaps = 6/191 (3%)
Query: 40 AVKILDFERDNSDLSNISREAQTMILVDHPNVLKS-HCSFVSDHNLWVVMPFMSGGSCLH 98
AVK L+ D ++S E M HPNVL S+ + VV+P+M G +
Sbjct: 62 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 121
Query: 99 ILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVS 158
++ + + +I L +V KG+ YL +HRD+ + N ++D + +K+ DFG++
Sbjct: 122 FIRNETHNPTVKDLIGFGL-QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLA 180
Query: 159 ACLFDSGDRQRMRNTFVGTPC-WMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSK 217
++D T P WMA E + Q + K+D+WSFG+ EL AP
Sbjct: 181 RDMYDKEYYSVHNKTGAKLPVKWMALESL-QTQKFTTKSDVWSFGVLLWELMTRGAP--P 237
Query: 218 YPPMKVLLMTL 228
YP + +T+
Sbjct: 238 YPDVNTFDITV 248
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 118/271 (43%), Gaps = 37/271 (13%)
Query: 19 VGQGVSASVHRALCIPFNEIVAVKILDFER--DNSDLSNISREAQTMILVDHPNVLKSHC 76
+G G SV+ + + N VA+K ++ +R D +L N +R ++L+ + S
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK---VSSGF 68
Query: 77 SFVSDHNLWVVMPFMSGGSCLHILKAAYP-----------DGFEEVVIATILREVLKGLD 125
S V W P S + IL+ P +E + + +VL+ +
Sbjct: 69 SGVIRLLDWFERP----DSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 124
Query: 126 YLHHHGHIHRDVKSGNILIDV-RGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPE 184
+ H+ G +HRD+K NILID+ RG +KL DFG A L D+ + F GT + PE
Sbjct: 125 HCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----VYTDFDGTRVYSPPE 179
Query: 185 VMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFS 244
+ + A +WS GI ++ G PF + G + R R S
Sbjct: 180 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD----------EEIIRGQVFFRQR-VS 228
Query: 245 KSFKQMIASCLVKDPSKRPSAKKLLKHSFFK 275
+ +I CL PS RP+ +++ H + +
Sbjct: 229 XECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 259
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 121/272 (44%), Gaps = 28/272 (10%)
Query: 19 VGQGVSASVHRALCIPFNEIVA--VKILDFERDNSDLSN--ISREAQTMILVDHPNV--L 72
+G G +V++ L IP E V V I + S +N I EA M VD+P+V L
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 73 KSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGH 132
C + + +MPF CL + D + ++ KG++YL
Sbjct: 83 LGICLTSTVQLITQLMPF----GCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRL 138
Query: 133 IHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVG-TPC-WMAPEVMEQLH 190
+HRD+ + N+L+ +K+ DFG++ L G ++ + G P WMA E + LH
Sbjct: 139 VHRDLAARNVLVKTPQHVKITDFGLAKLL---GAEEKEYHAEGGKVPIKWMALESI--LH 193
Query: 191 G-YDFKADIWSFGITALEL-AHGHAPFSKYPPMKV--LLMTLQNAPPGLDYERDRKFSKS 246
Y ++D+WS+G+T EL G P+ P ++ +L + P + +
Sbjct: 194 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLP------QPPICTID 247
Query: 247 FKQMIASCLVKDPSKRPSAKKLLKHSFFKQAR 278
++ C + D RP ++L+ F K AR
Sbjct: 248 VYMIMVKCWMIDADSRPKFRELII-EFSKMAR 278
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 91/191 (47%), Gaps = 6/191 (3%)
Query: 40 AVKILDFERDNSDLSNISREAQTMILVDHPNVLKS-HCSFVSDHNLWVVMPFMSGGSCLH 98
AVK L+ D ++S E M HPNVL S+ + VV+P+M G +
Sbjct: 54 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 113
Query: 99 ILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVS 158
++ + + +I L +V KG+ YL +HRD+ + N ++D + +K+ DFG++
Sbjct: 114 FIRNETHNPTVKDLIGFGL-QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLA 172
Query: 159 ACLFDSGDRQRMRNTFVGTPC-WMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSK 217
++D T P WMA E + Q + K+D+WSFG+ EL AP
Sbjct: 173 RDMYDKEYYSVHNKTGAKLPVKWMALESL-QTQKFTTKSDVWSFGVLLWELMTRGAP--P 229
Query: 218 YPPMKVLLMTL 228
YP + +T+
Sbjct: 230 YPDVNTFDITV 240
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 91/191 (47%), Gaps = 6/191 (3%)
Query: 40 AVKILDFERDNSDLSNISREAQTMILVDHPNVLKS-HCSFVSDHNLWVVMPFMSGGSCLH 98
AVK L+ D ++S E M HPNVL S+ + VV+P+M G +
Sbjct: 81 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 140
Query: 99 ILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVS 158
++ + + +I L +V KG+ YL +HRD+ + N ++D + +K+ DFG++
Sbjct: 141 FIRNETHNPTVKDLIGFGL-QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLA 199
Query: 159 ACLFDSGDRQRMRNTFVGTPC-WMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSK 217
++D T P WMA E + Q + K+D+WSFG+ EL AP
Sbjct: 200 RDMYDKEYYSVHNKTGAKLPVKWMALESL-QTQKFTTKSDVWSFGVLLWELMTRGAP--P 256
Query: 218 YPPMKVLLMTL 228
YP + +T+
Sbjct: 257 YPDVNTFDITV 267
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 121/272 (44%), Gaps = 28/272 (10%)
Query: 19 VGQGVSASVHRALCIPFNEIVA--VKILDFERDNSDLSN--ISREAQTMILVDHPNV--L 72
+G G +V++ L IP E V V I + S +N I EA M VD+P+V L
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 73 KSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGH 132
C + + +MPF CL + D + ++ KG++YL
Sbjct: 86 LGICLTSTVQLITQLMPF----GCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRL 141
Query: 133 IHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVG-TPC-WMAPEVMEQLH 190
+HRD+ + N+L+ +K+ DFG++ L G ++ + G P WMA E + LH
Sbjct: 142 VHRDLAARNVLVKTPQHVKITDFGLAKLL---GAEEKEYHAEGGKVPIKWMALESI--LH 196
Query: 191 G-YDFKADIWSFGITALEL-AHGHAPFSKYPPMKV--LLMTLQNAPPGLDYERDRKFSKS 246
Y ++D+WS+G+T EL G P+ P ++ +L + P + +
Sbjct: 197 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLP------QPPICTID 250
Query: 247 FKQMIASCLVKDPSKRPSAKKLLKHSFFKQAR 278
++ C + D RP ++L+ F K AR
Sbjct: 251 VYMIMVKCWMIDADSRPKFRELII-EFSKMAR 281
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 93/207 (44%), Gaps = 25/207 (12%)
Query: 84 LWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNIL 143
L +VM + GG ++ F E + I++ + + + YLH HRDVK N+L
Sbjct: 134 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 193
Query: 144 IDVR---GAIKLGDFGVSACLFDSGDRQRMRNTFVGTPC----WMAPEVMEQLHGYDFKA 196
+ +KL DFG + ++ + + TPC ++APEV+ YD
Sbjct: 194 YTSKRPNAILKLTDFGFA--------KETTSHNSLTTPCYTPYYVAPEVLGP-EKYDKSC 244
Query: 197 DIWSFGITALELAHGHAPF------SKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQM 250
D+WS G+ L G+ PF + P MK + Q P ++ + S+ K +
Sbjct: 245 DMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWS---EVSEEVKML 301
Query: 251 IASCLVKDPSKRPSAKKLLKHSFFKQA 277
I + L +P++R + + + H + Q+
Sbjct: 302 IRNLLKTEPTQRMTITEFMNHPWIMQS 328
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 91/191 (47%), Gaps = 6/191 (3%)
Query: 40 AVKILDFERDNSDLSNISREAQTMILVDHPNVLKS-HCSFVSDHNLWVVMPFMSGGSCLH 98
AVK L+ D ++S E M HPNVL S+ + VV+P+M G +
Sbjct: 80 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 139
Query: 99 ILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVS 158
++ + + +I L +V KG+ YL +HRD+ + N ++D + +K+ DFG++
Sbjct: 140 FIRNETHNPTVKDLIGFGL-QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLA 198
Query: 159 ACLFDSGDRQRMRNTFVGTPC-WMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSK 217
++D T P WMA E + Q + K+D+WSFG+ EL AP
Sbjct: 199 RDMYDKEYYSVHNKTGAKLPVKWMALESL-QTQKFTTKSDVWSFGVLLWELMTRGAP--P 255
Query: 218 YPPMKVLLMTL 228
YP + +T+
Sbjct: 256 YPDVNTFDITV 266
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 93/207 (44%), Gaps = 25/207 (12%)
Query: 84 LWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNIL 143
L +VM + GG ++ F E + I++ + + + YLH HRDVK N+L
Sbjct: 140 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 199
Query: 144 IDVR---GAIKLGDFGVSACLFDSGDRQRMRNTFVGTPC----WMAPEVMEQLHGYDFKA 196
+ +KL DFG + ++ + + TPC ++APEV+ YD
Sbjct: 200 YTSKRPNAILKLTDFGFA--------KETTSHNSLTTPCYTPYYVAPEVLGP-EKYDKSC 250
Query: 197 DIWSFGITALELAHGHAPF------SKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQM 250
D+WS G+ L G+ PF + P MK + Q P ++ + S+ K +
Sbjct: 251 DMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWS---EVSEEVKML 307
Query: 251 IASCLVKDPSKRPSAKKLLKHSFFKQA 277
I + L +P++R + + + H + Q+
Sbjct: 308 IRNLLKTEPTQRMTITEFMNHPWIMQS 334
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 91/191 (47%), Gaps = 6/191 (3%)
Query: 40 AVKILDFERDNSDLSNISREAQTMILVDHPNVLKS-HCSFVSDHNLWVVMPFMSGGSCLH 98
AVK L+ D ++S E M HPNVL S+ + VV+P+M G +
Sbjct: 61 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 120
Query: 99 ILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVS 158
++ + + +I L +V KG+ YL +HRD+ + N ++D + +K+ DFG++
Sbjct: 121 FIRNETHNPTVKDLIGFGL-QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLA 179
Query: 159 ACLFDSGDRQRMRNTFVGTPC-WMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSK 217
++D T P WMA E + Q + K+D+WSFG+ EL AP
Sbjct: 180 RDMYDKEYYSVHNKTGAKLPVKWMALESL-QTQKFTTKSDVWSFGVLLWELMTRGAP--P 236
Query: 218 YPPMKVLLMTL 228
YP + +T+
Sbjct: 237 YPDVNTFDITV 247
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 128/288 (44%), Gaps = 23/288 (7%)
Query: 2 DKKKYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEI-----VAVKILDFERDNSDLSNI 56
D K+ + L + +G+G V A ++ VAVK+L +S+ +
Sbjct: 18 DASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRAL 77
Query: 57 SREAQTMILVDHP-NV--LKSHCSFVSDHNLWVVMPFMSGGSCLHILKAA------YPDG 107
E + +I + H NV L C+ L V++ F G+ L++ Y D
Sbjct: 78 MSELKILIHIGHHLNVVNLLGACT-KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDL 136
Query: 108 FEEVVIATIL----REVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFD 163
+++ + L +V KG+++L IHRD+ + NIL+ + +K+ DFG++ ++
Sbjct: 137 YKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYK 196
Query: 164 SGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKV 223
D R + + WMAPE + Y ++D+WSFG+ E+ A S YP +K+
Sbjct: 197 DPDYVRKGDARLPLK-WMAPETIFD-RVYTIQSDVWSFGVLLWEIFSLGA--SPYPGVKI 252
Query: 224 LLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKH 271
+ G + Q + C +PS+RP+ +L++H
Sbjct: 253 DEEFXRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 300
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 19/211 (9%)
Query: 19 VGQGVSASVHRALCIPFNEIVA--VKILDFERDNSDLSN--ISREAQTMILVDHPNV--L 72
+G G +V++ L IP E V V I + S +N I EA M VD+P+V L
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 73 KSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGH 132
C + + +MPF CL + D + ++ KG++YL
Sbjct: 86 LGICLTSTVQLITQLMPF----GCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRL 141
Query: 133 IHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVG-TPC-WMAPEVMEQLH 190
+HRD+ + N+L+ +K+ DFG++ L G ++ + G P WMA E + LH
Sbjct: 142 VHRDLAARNVLVKTPQHVKITDFGLAKLL---GAEEKEYHAEGGKVPIKWMALESI--LH 196
Query: 191 G-YDFKADIWSFGITALEL-AHGHAPFSKYP 219
Y ++D+WS+G+T EL G P+ P
Sbjct: 197 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 227
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 78/190 (41%), Gaps = 32/190 (16%)
Query: 113 IATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN 172
+ ++ ++L+GL Y+H IHRD+K N+ ++ +K+ DFG++ D
Sbjct: 156 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE------MT 209
Query: 173 TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVL--LMTLQN 230
+V T + APE+M Y+ DIWS G EL G F + L +M L
Sbjct: 210 GYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTG 269
Query: 231 APPGLDYER-----DRKFSKSFKQM-------------------IASCLVKDPSKRPSAK 266
PP R R + S QM + LV D KR +A
Sbjct: 270 TPPASVISRMPSHEARNYINSLPQMPKRNFADVFIGANPLAVDLLEKMLVLDTDKRITAS 329
Query: 267 KLLKHSFFKQ 276
+ L H +F Q
Sbjct: 330 EALAHPYFSQ 339
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 91/191 (47%), Gaps = 6/191 (3%)
Query: 40 AVKILDFERDNSDLSNISREAQTMILVDHPNVLKS-HCSFVSDHNLWVVMPFMSGGSCLH 98
AVK L+ D ++S E M HPNVL S+ + VV+P+M G +
Sbjct: 62 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 121
Query: 99 ILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVS 158
++ + + +I L +V KG+ YL +HRD+ + N ++D + +K+ DFG++
Sbjct: 122 FIRNETHNPTVKDLIGFGL-QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLA 180
Query: 159 ACLFDSGDRQRMRNTFVGTPC-WMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSK 217
++D T P WMA E + Q + K+D+WSFG+ EL AP
Sbjct: 181 RDMYDKEYYSVHNKTGAKLPVKWMALESL-QTQKFTTKSDVWSFGVLLWELMTRGAP--P 237
Query: 218 YPPMKVLLMTL 228
YP + +T+
Sbjct: 238 YPDVNTFDITV 248
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 118/271 (43%), Gaps = 37/271 (13%)
Query: 19 VGQGVSASVHRALCIPFNEIVAVKILDFER--DNSDLSNISREAQTMILVDHPNVLKSHC 76
+G G SV+ + + N VA+K ++ +R D +L N +R ++L+ + S
Sbjct: 15 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK---VSSGF 71
Query: 77 SFVSDHNLWVVMPFMSGGSCLHILKAAYP-----------DGFEEVVIATILREVLKGLD 125
S V W P S + IL+ P +E + + +VL+ +
Sbjct: 72 SGVIRLLDWFERP----DSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 127
Query: 126 YLHHHGHIHRDVKSGNILIDV-RGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPE 184
+ H+ G +HRD+K NILID+ RG +KL DFG A L D+ + F GT + PE
Sbjct: 128 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----VYTDFDGTRVYSPPE 182
Query: 185 VMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFS 244
+ + A +WS GI ++ G PF + G + R R S
Sbjct: 183 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD----------EEIIRGQVFFRQR-VS 231
Query: 245 KSFKQMIASCLVKDPSKRPSAKKLLKHSFFK 275
+ +I CL PS RP+ +++ H + +
Sbjct: 232 SECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 262
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 91/191 (47%), Gaps = 6/191 (3%)
Query: 40 AVKILDFERDNSDLSNISREAQTMILVDHPNVLKS-HCSFVSDHNLWVVMPFMSGGSCLH 98
AVK L+ D ++S E M HPNVL S+ + VV+P+M G +
Sbjct: 59 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 118
Query: 99 ILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVS 158
++ + + +I L +V KG+ YL +HRD+ + N ++D + +K+ DFG++
Sbjct: 119 FIRNETHNPTVKDLIGFGL-QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLA 177
Query: 159 ACLFDSGDRQRMRNTFVGTPC-WMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSK 217
++D T P WMA E + Q + K+D+WSFG+ EL AP
Sbjct: 178 RDMYDKEYYSVHNKTGAKLPVKWMALESL-QTQKFTTKSDVWSFGVLLWELMTRGAP--P 234
Query: 218 YPPMKVLLMTL 228
YP + +T+
Sbjct: 235 YPDVNTFDITV 245
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 91/191 (47%), Gaps = 6/191 (3%)
Query: 40 AVKILDFERDNSDLSNISREAQTMILVDHPNVLKS-HCSFVSDHNLWVVMPFMSGGSCLH 98
AVK L+ D ++S E M HPNVL S+ + VV+P+M G +
Sbjct: 57 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 116
Query: 99 ILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVS 158
++ + + +I L +V KG+ YL +HRD+ + N ++D + +K+ DFG++
Sbjct: 117 FIRNETHNPTVKDLIGFGL-QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLA 175
Query: 159 ACLFDSGDRQRMRNTFVGTPC-WMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSK 217
++D T P WMA E + Q + K+D+WSFG+ EL AP
Sbjct: 176 RDMYDKEYYSVHNKTGAKLPVKWMALESL-QTQKFTTKSDVWSFGVLLWELMTRGAP--P 232
Query: 218 YPPMKVLLMTL 228
YP + +T+
Sbjct: 233 YPDVNTFDITV 243
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 91/191 (47%), Gaps = 6/191 (3%)
Query: 40 AVKILDFERDNSDLSNISREAQTMILVDHPNVLKS-HCSFVSDHNLWVVMPFMSGGSCLH 98
AVK L+ D ++S E M HPNVL S+ + VV+P+M G +
Sbjct: 60 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 119
Query: 99 ILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVS 158
++ + + +I L +V KG+ YL +HRD+ + N ++D + +K+ DFG++
Sbjct: 120 FIRNETHNPTVKDLIGFGL-QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLA 178
Query: 159 ACLFDSGDRQRMRNTFVGTPC-WMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSK 217
++D T P WMA E + Q + K+D+WSFG+ EL AP
Sbjct: 179 RDMYDKEYYSVHNKTGAKLPVKWMALESL-QTQKFTTKSDVWSFGVLLWELMTRGAP--P 235
Query: 218 YPPMKVLLMTL 228
YP + +T+
Sbjct: 236 YPDVNTFDITV 246
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 116/268 (43%), Gaps = 20/268 (7%)
Query: 19 VGQGVSASVHRALCIPFNEIV----AVKILDFERDNSDLSNISREAQTMILVDHPNVLKS 74
+G G +V++ + +P E V A+KIL+ EA M +DHP++++
Sbjct: 23 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 82
Query: 75 HCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIH 134
+S + +V M G CL + D ++ ++ KG+ YL +H
Sbjct: 83 LGVCLSP-TIQLVTQLMPHG-CLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVH 140
Query: 135 RDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPC-WMAPEVMEQLHGYD 193
RD+ + N+L+ +K+ DFG++ L GD + P WMA E + +
Sbjct: 141 RDLAARNVLVKSPNHVKITDFGLARLL--EGDEKEYNADGGKMPIKWMALECI-HYRKFT 197
Query: 194 FKADIWSFGITALEL-AHGHAPFSKYPPMKV--LLMTLQNAPPGLDYERDRKFSKSFKQM 250
++D+WS+G+T EL G P+ P ++ LL + P + + +
Sbjct: 198 HQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGERLP------QPPICTIDVYMV 251
Query: 251 IASCLVKDPSKRPSAKKLLKHSFFKQAR 278
+ C + D RP K+ L F + AR
Sbjct: 252 MVKCWMIDADSRPKFKE-LAAEFSRMAR 278
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 93/207 (44%), Gaps = 25/207 (12%)
Query: 84 LWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNIL 143
L +VM + GG ++ F E + I++ + + + YLH HRDVK N+L
Sbjct: 90 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 149
Query: 144 IDVR---GAIKLGDFGVSACLFDSGDRQRMRNTFVGTPC----WMAPEVMEQLHGYDFKA 196
+ +KL DFG + ++ + + TPC ++APEV+ YD
Sbjct: 150 YTSKRPNAILKLTDFGFA--------KETTSHNSLTTPCYTPYYVAPEVLGP-EKYDKSC 200
Query: 197 DIWSFGITALELAHGHAPF------SKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQM 250
D+WS G+ L G+ PF + P MK + Q P ++ + S+ K +
Sbjct: 201 DMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWS---EVSEEVKML 257
Query: 251 IASCLVKDPSKRPSAKKLLKHSFFKQA 277
I + L +P++R + + + H + Q+
Sbjct: 258 IRNLLKTEPTQRMTITEFMNHPWIMQS 284
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 128/288 (44%), Gaps = 23/288 (7%)
Query: 2 DKKKYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEI-----VAVKILDFERDNSDLSNI 56
D K+ + L + +G+G V A ++ VAVK+L +S+ +
Sbjct: 18 DASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRAL 77
Query: 57 SREAQTMILVDHP-NV--LKSHCSFVSDHNLWVVMPFMSGGSCLHILKAA------YPDG 107
E + +I + H NV L C+ L V++ F G+ L++ Y D
Sbjct: 78 MSELKILIHIGHHLNVVNLLGACT-KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDL 136
Query: 108 FEEVVIATIL----REVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFD 163
+++ + L +V KG+++L IHRD+ + NIL+ + +K+ DFG++ ++
Sbjct: 137 YKDFLTLEHLICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYK 196
Query: 164 SGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKV 223
D R + + WMAPE + Y ++D+WSFG+ E+ A S YP +K+
Sbjct: 197 DPDYVRKGDARLPLK-WMAPETIFD-RVYTIQSDVWSFGVLLWEIFSLGA--SPYPGVKI 252
Query: 224 LLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKH 271
+ G + Q + C +PS+RP+ +L++H
Sbjct: 253 DEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 300
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 79/170 (46%), Gaps = 17/170 (10%)
Query: 107 GFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDV-RGAIKLGDFGVSACLFDSG 165
+E + + +VL+ + + H+ G +HRD+K NILID+ RG +KL DFG A L D+
Sbjct: 153 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT- 211
Query: 166 DRQRMRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLL 225
+ F GT + PE + + A +WS GI ++ G PF
Sbjct: 212 ----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------- 260
Query: 226 MTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSFFK 275
+ G + R R S + +I CL PS RP+ +++ H + +
Sbjct: 261 ---EEIIRGQVFFRQR-VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 306
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 118/271 (43%), Gaps = 37/271 (13%)
Query: 19 VGQGVSASVHRALCIPFNEIVAVKILDFER--DNSDLSNISREAQTMILVDHPNVLKSHC 76
+G G SV+ + + N VA+K ++ +R D +L N +R ++L+ + S
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK---VSSGF 68
Query: 77 SFVSDHNLWVVMPFMSGGSCLHILKAAYP-----------DGFEEVVIATILREVLKGLD 125
S V W P S + IL+ P +E + + +VL+ +
Sbjct: 69 SGVIRLLDWFERP----DSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 124
Query: 126 YLHHHGHIHRDVKSGNILIDV-RGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPE 184
+ H+ G +HRD+K NILID+ RG +KL DFG A L D+ + F GT + PE
Sbjct: 125 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----VYTDFDGTRVYSPPE 179
Query: 185 VMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFS 244
+ + A +WS GI ++ G PF + G + R R S
Sbjct: 180 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD----------EEIIGGQVFFRQR-VS 228
Query: 245 KSFKQMIASCLVKDPSKRPSAKKLLKHSFFK 275
+ +I CL PS RP+ +++ H + +
Sbjct: 229 SECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 259
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 116/268 (43%), Gaps = 20/268 (7%)
Query: 19 VGQGVSASVHRALCIPFNEIV----AVKILDFERDNSDLSNISREAQTMILVDHPNVLKS 74
+G G +V++ + +P E V A+KIL+ EA M +DHP++++
Sbjct: 46 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 105
Query: 75 HCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIH 134
+S + +V M G CL + D ++ ++ KG+ YL +H
Sbjct: 106 LGVCLSP-TIQLVTQLMPHG-CLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVH 163
Query: 135 RDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPC-WMAPEVMEQLHGYD 193
RD+ + N+L+ +K+ DFG++ L GD + P WMA E + +
Sbjct: 164 RDLAARNVLVKSPNHVKITDFGLARLL--EGDEKEYNADGGKMPIKWMALECI-HYRKFT 220
Query: 194 FKADIWSFGITALEL-AHGHAPFSKYPPMKV--LLMTLQNAPPGLDYERDRKFSKSFKQM 250
++D+WS+G+T EL G P+ P ++ LL + P + + +
Sbjct: 221 HQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGERLP------QPPICTIDVYMV 274
Query: 251 IASCLVKDPSKRPSAKKLLKHSFFKQAR 278
+ C + D RP K+ L F + AR
Sbjct: 275 MVKCWMIDADSRPKFKE-LAAEFSRMAR 301
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 122/273 (44%), Gaps = 30/273 (10%)
Query: 19 VGQGVSASVHRALCIPFNEIVA--VKILDFERDNSDLSN--ISREAQTMILVDHPNV--L 72
+G G +V++ L IP E V V I + S +N I EA M VD+P+V L
Sbjct: 17 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 76
Query: 73 KSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGH 132
C + + +MPF CL + D + ++ KG++YL
Sbjct: 77 LGICLTSTVQLITQLMPF----GCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRL 132
Query: 133 IHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVG-TPC-WMAPEVMEQLH 190
+HRD+ + N+L+ +K+ DFG++ L G ++ + G P WMA E + LH
Sbjct: 133 VHRDLAARNVLVKTPQHVKITDFGLAKLL---GAEEKEYHAEGGKVPIKWMALESI--LH 187
Query: 191 G-YDFKADIWSFGITALEL-AHGHAPFSKYPPMKV--LLMTLQNAP-PGLDYERDRKFSK 245
Y ++D+WS+G+T EL G P+ P ++ +L + P P + +
Sbjct: 188 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI-------CTI 240
Query: 246 SFKQMIASCLVKDPSKRPSAKKLLKHSFFKQAR 278
++ C + D RP ++L+ F K AR
Sbjct: 241 DVYMIMVKCWMIDADSRPKFRELII-EFSKMAR 272
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 93/207 (44%), Gaps = 25/207 (12%)
Query: 84 LWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNIL 143
L +VM + GG ++ F E + I++ + + + YLH HRDVK N+L
Sbjct: 88 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 147
Query: 144 IDVR---GAIKLGDFGVSACLFDSGDRQRMRNTFVGTPC----WMAPEVMEQLHGYDFKA 196
+ +KL DFG + ++ + + TPC ++APEV+ YD
Sbjct: 148 YTSKRPNAILKLTDFGFA--------KETTSHNSLTTPCYTPYYVAPEVLGP-EKYDKSC 198
Query: 197 DIWSFGITALELAHGHAPF------SKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQM 250
D+WS G+ L G+ PF + P MK + Q P ++ + S+ K +
Sbjct: 199 DMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWS---EVSEEVKML 255
Query: 251 IASCLVKDPSKRPSAKKLLKHSFFKQA 277
I + L +P++R + + + H + Q+
Sbjct: 256 IRNLLKTEPTQRMTITEFMNHPWIMQS 282
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 19/211 (9%)
Query: 19 VGQGVSASVHRALCIPFNEIVA--VKILDFERDNSDLSN--ISREAQTMILVDHPNV--L 72
+G G +V++ L IP E V V I + S +N I EA M VD+P+V L
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 73 KSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGH 132
C + + +MPF CL + D + ++ KG++YL
Sbjct: 83 LGICLTSTVQLITQLMPF----GCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRL 138
Query: 133 IHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVG-TPC-WMAPEVMEQLH 190
+HRD+ + N+L+ +K+ DFG++ L G ++ + G P WMA E + LH
Sbjct: 139 VHRDLAARNVLVKTPQHVKITDFGLAKLL---GAEEKEYHAEGGKVPIKWMALESI--LH 193
Query: 191 G-YDFKADIWSFGITALEL-AHGHAPFSKYP 219
Y ++D+WS+G+T EL G P+ P
Sbjct: 194 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 224
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 121/270 (44%), Gaps = 24/270 (8%)
Query: 19 VGQGVSASVHRALCIPFNEIVA--VKILDFERDNSDLSN--ISREAQTMILVDHPNVLKS 74
+G G +V++ L IP E V V I + S +N I EA M VD+P+V +
Sbjct: 24 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 83
Query: 75 HCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIH 134
+ ++M M G L ++ + D + ++ KG++YL +H
Sbjct: 84 -LGICLTSTVQLIMQLMPFGXLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 141
Query: 135 RDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVG-TPC-WMAPEVMEQLHG- 191
RD+ + N+L+ +K+ DFG++ L G ++ + G P WMA E + LH
Sbjct: 142 RDLAARNVLVKTPQHVKITDFGLAKLL---GAEEKEYHAEGGKVPIKWMALESI--LHRI 196
Query: 192 YDFKADIWSFGITALEL-AHGHAPFSKYPPMKV--LLMTLQNAPPGLDYERDRKFSKSFK 248
Y ++D+WS+G+T EL G P+ P ++ +L + P + +
Sbjct: 197 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLP------QPPICTIDVY 250
Query: 249 QMIASCLVKDPSKRPSAKKLLKHSFFKQAR 278
++ C + D RP ++L+ F K AR
Sbjct: 251 MIMVKCWMIDADSRPKFRELII-EFSKMAR 279
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 118/271 (43%), Gaps = 37/271 (13%)
Query: 19 VGQGVSASVHRALCIPFNEIVAVKILDFER--DNSDLSNISREAQTMILVDHPNVLKSHC 76
+G G SV+ + + N VA+K ++ +R D +L N +R ++L+ + S
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK---VSSGF 68
Query: 77 SFVSDHNLWVVMPFMSGGSCLHILKAAYP-----------DGFEEVVIATILREVLKGLD 125
S V W P S + IL+ P +E + + +VL+ +
Sbjct: 69 SGVIRLLDWFERP----DSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 124
Query: 126 YLHHHGHIHRDVKSGNILIDV-RGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPE 184
+ H+ G +HRD+K NILID+ RG +KL DFG A L D+ + F GT + PE
Sbjct: 125 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----VYTDFDGTRVYSPPE 179
Query: 185 VMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFS 244
+ + A +WS GI ++ G PF + G + R R S
Sbjct: 180 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD----------EEIIRGQVFFRQR-VS 228
Query: 245 KSFKQMIASCLVKDPSKRPSAKKLLKHSFFK 275
+ +I CL PS RP+ +++ H + +
Sbjct: 229 SECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 259
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 93/207 (44%), Gaps = 25/207 (12%)
Query: 84 LWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNIL 143
L +VM + GG ++ F E + I++ + + + YLH HRDVK N+L
Sbjct: 90 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 149
Query: 144 IDVR---GAIKLGDFGVSACLFDSGDRQRMRNTFVGTPC----WMAPEVMEQLHGYDFKA 196
+ +KL DFG + ++ + + TPC ++APEV+ YD
Sbjct: 150 YTSKRPNAILKLTDFGFA--------KETTSHNSLTTPCYTPYYVAPEVLGP-EKYDKSC 200
Query: 197 DIWSFGITALELAHGHAPF------SKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQM 250
D+WS G+ L G+ PF + P MK + Q P ++ + S+ K +
Sbjct: 201 DMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWS---EVSEEVKML 257
Query: 251 IASCLVKDPSKRPSAKKLLKHSFFKQA 277
I + L +P++R + + + H + Q+
Sbjct: 258 IRNLLKTEPTQRMTITEFMNHPWIMQS 284
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 93/207 (44%), Gaps = 25/207 (12%)
Query: 84 LWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNIL 143
L +VM + GG ++ F E + I++ + + + YLH HRDVK N+L
Sbjct: 95 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 154
Query: 144 IDVR---GAIKLGDFGVSACLFDSGDRQRMRNTFVGTPC----WMAPEVMEQLHGYDFKA 196
+ +KL DFG + ++ + + TPC ++APEV+ YD
Sbjct: 155 YTSKRPNAILKLTDFGFA--------KETTSHNSLTTPCYTPYYVAPEVLGP-EKYDKSC 205
Query: 197 DIWSFGITALELAHGHAPF------SKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQM 250
D+WS G+ L G+ PF + P MK + Q P ++ + S+ K +
Sbjct: 206 DMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWS---EVSEEVKML 262
Query: 251 IASCLVKDPSKRPSAKKLLKHSFFKQA 277
I + L +P++R + + + H + Q+
Sbjct: 263 IRNLLKTEPTQRMTITEFMNHPWIMQS 289
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 93/207 (44%), Gaps = 25/207 (12%)
Query: 84 LWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNIL 143
L +VM + GG ++ F E + I++ + + + YLH HRDVK N+L
Sbjct: 94 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 153
Query: 144 IDVR---GAIKLGDFGVSACLFDSGDRQRMRNTFVGTPC----WMAPEVMEQLHGYDFKA 196
+ +KL DFG + ++ + + TPC ++APEV+ YD
Sbjct: 154 YTSKRPNAILKLTDFGFA--------KETTSHNSLTTPCYTPYYVAPEVLGP-EKYDKSC 204
Query: 197 DIWSFGITALELAHGHAPF------SKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQM 250
D+WS G+ L G+ PF + P MK + Q P ++ + S+ K +
Sbjct: 205 DMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWS---EVSEEVKML 261
Query: 251 IASCLVKDPSKRPSAKKLLKHSFFKQA 277
I + L +P++R + + + H + Q+
Sbjct: 262 IRNLLKTEPTQRMTITEFMNHPWIMQS 288
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 120/272 (44%), Gaps = 28/272 (10%)
Query: 19 VGQGVSASVHRALCIPFNEIVA--VKILDFERDNSDLSN--ISREAQTMILVDHPNV--L 72
+G G +V++ L IP E V V I + S +N I EA M VD+P+V L
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 73 KSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGH 132
C + + +MPF CL + D + ++ KG++YL
Sbjct: 85 LGICLTSTVQLIMQLMPF----GCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRL 140
Query: 133 IHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVG-TPC-WMAPEVMEQLH 190
+HRD+ + N+L+ +K+ DFG + L G ++ + G P WMA E + LH
Sbjct: 141 VHRDLAARNVLVKTPQHVKITDFGRAKLL---GAEEKEYHAEGGKVPIKWMALESI--LH 195
Query: 191 G-YDFKADIWSFGITALEL-AHGHAPFSKYPPMKV--LLMTLQNAPPGLDYERDRKFSKS 246
Y ++D+WS+G+T EL G P+ P ++ +L + P + +
Sbjct: 196 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLP------QPPICTID 249
Query: 247 FKQMIASCLVKDPSKRPSAKKLLKHSFFKQAR 278
++ C + D RP ++L+ F K AR
Sbjct: 250 VYMIMVKCWMIDADSRPKFRELII-EFSKMAR 280
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 93/207 (44%), Gaps = 25/207 (12%)
Query: 84 LWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNIL 143
L +VM + GG ++ F E + I++ + + + YLH HRDVK N+L
Sbjct: 96 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 155
Query: 144 IDVR---GAIKLGDFGVSACLFDSGDRQRMRNTFVGTPC----WMAPEVMEQLHGYDFKA 196
+ +KL DFG + ++ + + TPC ++APEV+ YD
Sbjct: 156 YTSKRPNAILKLTDFGFA--------KETTSHNSLTTPCYTPYYVAPEVLGP-EKYDKSC 206
Query: 197 DIWSFGITALELAHGHAPF------SKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQM 250
D+WS G+ L G+ PF + P MK + Q P ++ + S+ K +
Sbjct: 207 DMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWS---EVSEEVKML 263
Query: 251 IASCLVKDPSKRPSAKKLLKHSFFKQA 277
I + L +P++R + + + H + Q+
Sbjct: 264 IRNLLKTEPTQRMTITEFMNHPWIMQS 290
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 93/207 (44%), Gaps = 25/207 (12%)
Query: 84 LWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNIL 143
L +VM + GG ++ F E + I++ + + + YLH HRDVK N+L
Sbjct: 89 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 148
Query: 144 IDVR---GAIKLGDFGVSACLFDSGDRQRMRNTFVGTPC----WMAPEVMEQLHGYDFKA 196
+ +KL DFG + ++ + + TPC ++APEV+ YD
Sbjct: 149 YTSKRPNAILKLTDFGFA--------KETTSHNSLTTPCYTPYYVAPEVLGP-EKYDKSC 199
Query: 197 DIWSFGITALELAHGHAPF------SKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQM 250
D+WS G+ L G+ PF + P MK + Q P ++ + S+ K +
Sbjct: 200 DMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWS---EVSEEVKML 256
Query: 251 IASCLVKDPSKRPSAKKLLKHSFFKQA 277
I + L +P++R + + + H + Q+
Sbjct: 257 IRNLLKTEPTQRMTITEFMNHPWIMQS 283
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 97/211 (45%), Gaps = 19/211 (9%)
Query: 19 VGQGVSASVHRALCIPFNEIVA--VKILDFERDNSDLSN--ISREAQTMILVDHPNV--L 72
+G G +V++ L IP E V V I + S +N I EA M VD+P+V L
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 73 KSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGH 132
C + + +MPF CL + D + ++ KG++YL
Sbjct: 85 LGICLTSTVQLIMQLMPF----GCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRL 140
Query: 133 IHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVG-TPC-WMAPEVMEQLH 190
+HRD+ + N+L+ +K+ DFG + L G ++ + G P WMA E + LH
Sbjct: 141 VHRDLAARNVLVKTPQHVKITDFGRAKLL---GAEEKEYHAEGGKVPIKWMALESI--LH 195
Query: 191 G-YDFKADIWSFGITALEL-AHGHAPFSKYP 219
Y ++D+WS+G+T EL G P+ P
Sbjct: 196 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 226
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 120/272 (44%), Gaps = 28/272 (10%)
Query: 19 VGQGVSASVHRALCIPFNEIVA--VKILDFERDNSDLSN--ISREAQTMILVDHPNV--L 72
+G G +V++ L IP E V V I + S +N I EA M VD+P+V L
Sbjct: 27 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 86
Query: 73 KSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGH 132
C + + +MPF CL + D + ++ KG++YL
Sbjct: 87 LGICLTSTVQLIMQLMPF----GCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRL 142
Query: 133 IHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVG-TPC-WMAPEVMEQLH 190
+HRD+ + N+L+ +K+ DFG + L G ++ + G P WMA E + LH
Sbjct: 143 VHRDLAARNVLVKTPQHVKITDFGRAKLL---GAEEKEYHAEGGKVPIKWMALESI--LH 197
Query: 191 G-YDFKADIWSFGITALEL-AHGHAPFSKYPPMKV--LLMTLQNAPPGLDYERDRKFSKS 246
Y ++D+WS+G+T EL G P+ P ++ +L + P + +
Sbjct: 198 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLP------QPPICTID 251
Query: 247 FKQMIASCLVKDPSKRPSAKKLLKHSFFKQAR 278
++ C + D RP ++L+ F K AR
Sbjct: 252 VYMIMVKCWMIDADSRPKFRELII-EFSKMAR 282
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 115/270 (42%), Gaps = 35/270 (12%)
Query: 17 EEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPNVLKSH- 75
E +G G V +A + +K + + + ++ RE + + +DH N++ +
Sbjct: 17 ELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAE-----REVKALAKLDHVNIVHYNG 71
Query: 76 CSFVSDHN---------------LWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREV 120
C D++ L++ M F G+ ++ + ++V+ + ++
Sbjct: 72 CWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQI 131
Query: 121 LKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCW 180
KG+DY+H I+RD+K NI + +K+GDFG+ L + G R R + GT +
Sbjct: 132 TKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRSK----GTLRY 187
Query: 181 MAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERD 240
M+PE + Y + D+++ G+ EL H + + K +
Sbjct: 188 MSPEQISS-QDYGKEVDLYALGLILAELLH--VCDTAFETSKFFTDLRDGIISDI----- 239
Query: 241 RKFSKSFKQMIASCLVKDPSKRPSAKKLLK 270
F K K ++ L K P RP+ ++L+
Sbjct: 240 --FDKKEKTLLQKLLSKKPEDRPNTSEILR 267
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 85/185 (45%), Gaps = 34/185 (18%)
Query: 109 EEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQ 168
E V I ++ + +++LH G +HRD+K NI + +K+GDFG+ + + Q
Sbjct: 116 ERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQ 175
Query: 169 RM--------RNTF-VGTPCWMAPEVMEQLHG--YDFKADIWSFGITALELAHGHAPFSK 217
+ R+T VGT +M+P EQ+HG Y K DI+S G+ EL + PFS
Sbjct: 176 TVLTPMPAYARHTGQVGTKLYMSP---EQIHGNSYSHKVDIFSLGLILFELLY---PFS- 228
Query: 218 YPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQ-------MIASCLVKDPSKRPSAKKLLK 270
T L R+ KF F Q M+ L P +RP A +++
Sbjct: 229 ---------TQMERVRTLTDVRNLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279
Query: 271 HSFFK 275
++ F+
Sbjct: 280 NAVFE 284
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 124/295 (42%), Gaps = 37/295 (12%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNIS-REAQTMILVDHP 69
+ Y ++G+G V++A+ NE VA+K + E + + + RE + + H
Sbjct: 34 DRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHR 93
Query: 70 NVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHH 129
N+++ +H L ++ + ++ K PD VI + L +++ G+++ H
Sbjct: 94 NIIELKSVIHHNHRLHLIFEYAENDLKKYMDKN--PD-VSMRVIKSFLYQLINGVNFCHS 150
Query: 130 HGHIHRDVKSGNILIDVRGA-----IKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPE 184
+HRD+K N+L+ V A +K+GDFG++ G R + T + PE
Sbjct: 151 RRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAF---GIPIRQFTHEIITLWYRPPE 207
Query: 185 VMEQLHGYDFKADIWSFGITALELAHGHAPFSK-------YPPMKVLLMTLQNAPPGLDY 237
++ Y DIWS E+ F + +VL + PG+
Sbjct: 208 ILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTA 267
Query: 238 ERDRKFS------KSFKQMIA------------SCLVKDPSKRPSAKKLLKHSFF 274
D K S K+ K+++ + L DP KR SAK L+H +F
Sbjct: 268 LPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYF 322
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 81/190 (42%), Gaps = 32/190 (16%)
Query: 113 IATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN 172
+ ++ ++L+GL Y+H IHRD+K N+ ++ +K+ DFG++ D
Sbjct: 129 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDE------MT 182
Query: 173 TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 231
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 183 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 242
Query: 232 PPG------LDYERDRKFSKSFKQM-------------------IASCLVKDPSKRPSAK 266
PG + E R + +S QM + LV D KR +A
Sbjct: 243 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 302
Query: 267 KLLKHSFFKQ 276
+ L H++F Q
Sbjct: 303 QALAHAYFAQ 312
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 81/190 (42%), Gaps = 32/190 (16%)
Query: 113 IATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN 172
+ ++ ++L+GL Y+H IHRD+K N+ ++ +K+ DFG++ D
Sbjct: 133 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDE------MT 186
Query: 173 TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 231
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 187 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 246
Query: 232 PPG------LDYERDRKFSKSFKQM-------------------IASCLVKDPSKRPSAK 266
PG + E R + +S QM + LV D KR +A
Sbjct: 247 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 306
Query: 267 KLLKHSFFKQ 276
+ L H++F Q
Sbjct: 307 QALAHAYFAQ 316
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 93/207 (44%), Gaps = 25/207 (12%)
Query: 84 LWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNIL 143
L +VM + GG ++ F E + I++ + + + YLH HRDVK N+L
Sbjct: 104 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 163
Query: 144 IDVR---GAIKLGDFGVSACLFDSGDRQRMRNTFVGTPC----WMAPEVMEQLHGYDFKA 196
+ +KL DFG + ++ + + TPC ++APEV+ YD
Sbjct: 164 YTSKRPNAILKLTDFGFA--------KETTSHNSLTTPCYTPYYVAPEVLGP-EKYDKSC 214
Query: 197 DIWSFGITALELAHGHAPF------SKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQM 250
D+WS G+ L G+ PF + P MK + Q P ++ + S+ K +
Sbjct: 215 DMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWS---EVSEEVKML 271
Query: 251 IASCLVKDPSKRPSAKKLLKHSFFKQA 277
I + L +P++R + + + H + Q+
Sbjct: 272 IRNLLKTEPTQRMTITEFMNHPWIMQS 298
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 81/190 (42%), Gaps = 32/190 (16%)
Query: 113 IATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN 172
+ ++ ++L+GL Y+H IHRD+K N+ ++ +K+ DFG++ D
Sbjct: 134 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE------MT 187
Query: 173 TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 231
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 188 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 247
Query: 232 PPG------LDYERDRKFSKSFKQM-------------------IASCLVKDPSKRPSAK 266
PG + E R + +S QM + LV D KR +A
Sbjct: 248 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 307
Query: 267 KLLKHSFFKQ 276
+ L H++F Q
Sbjct: 308 QALAHAYFAQ 317
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 120/272 (44%), Gaps = 28/272 (10%)
Query: 19 VGQGVSASVHRALCIPFNEIVA--VKILDFERDNSDLSN--ISREAQTMILVDHPNV--L 72
+G G +V++ L IP E V V I + S +N I EA M VD+P+V L
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 73 KSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGH 132
C + + +MPF CL + D + ++ KG++YL
Sbjct: 83 LGICLTSTVQLITQLMPF----GCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRL 138
Query: 133 IHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVG-TPC-WMAPEVMEQLH 190
+HRD+ + N+L+ +K+ DFG + L G ++ + G P WMA E + LH
Sbjct: 139 VHRDLAARNVLVKTPQHVKITDFGRAKLL---GAEEKEYHAEGGKVPIKWMALESI--LH 193
Query: 191 G-YDFKADIWSFGITALEL-AHGHAPFSKYPPMKV--LLMTLQNAPPGLDYERDRKFSKS 246
Y ++D+WS+G+T EL G P+ P ++ +L + P + +
Sbjct: 194 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLP------QPPICTID 247
Query: 247 FKQMIASCLVKDPSKRPSAKKLLKHSFFKQAR 278
++ C + D RP ++L+ F K AR
Sbjct: 248 VYMIMVKCWMIDADSRPKFRELII-EFSKMAR 278
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 118/270 (43%), Gaps = 24/270 (8%)
Query: 19 VGQGVSASVHRALCIPFNEIVA--VKILDFERDNSDLSN--ISREAQTMILVDHPNV--L 72
+G G +V++ L IP E V V I + S +N I EA M VD+P+V L
Sbjct: 30 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 73 KSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGH 132
C + + +MPF CL + D + ++ KG++YL
Sbjct: 90 LGICLTSTVQLITQLMPF----GCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRL 145
Query: 133 IHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHG- 191
+HRD+ + N+L+ +K+ DFG A L + +++ WMA E + LH
Sbjct: 146 VHRDLAARNVLVKTPQHVKITDFG-RAKLLGAEEKEYHAEGGKVPIKWMALESI--LHRI 202
Query: 192 YDFKADIWSFGITALEL-AHGHAPFSKYPPMKV--LLMTLQNAPPGLDYERDRKFSKSFK 248
Y ++D+WS+G+T EL G P+ P ++ +L + P + +
Sbjct: 203 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLP------QPPICTIDVY 256
Query: 249 QMIASCLVKDPSKRPSAKKLLKHSFFKQAR 278
++ C + D RP ++L+ F K AR
Sbjct: 257 MIMVKCWMIDADSRPKFRELII-EFSKMAR 285
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 97/211 (45%), Gaps = 19/211 (9%)
Query: 19 VGQGVSASVHRALCIPFNEIVA--VKILDFERDNSDLSN--ISREAQTMILVDHPNV--L 72
+G G +V++ L IP E V V I + S +N I EA M VD+P+V L
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 73 KSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGH 132
C + + +MPF CL + D + ++ KG++YL
Sbjct: 85 LGICLTSTVQLITQLMPF----GCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRL 140
Query: 133 IHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVG-TPC-WMAPEVMEQLH 190
+HRD+ + N+L+ +K+ DFG + L G ++ + G P WMA E + LH
Sbjct: 141 VHRDLAARNVLVKTPQHVKITDFGRAKLL---GAEEKEYHAEGGKVPIKWMALESI--LH 195
Query: 191 G-YDFKADIWSFGITALEL-AHGHAPFSKYP 219
Y ++D+WS+G+T EL G P+ P
Sbjct: 196 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 226
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 123/272 (45%), Gaps = 28/272 (10%)
Query: 19 VGQGVSASVHRALCIPFNEIVA--VKILDFERDNSDLSN--ISREAQTMILVDHPNV--L 72
+G G +V++ L IP E V V I + S +N I EA M VD+P+V L
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 73 KSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGH 132
C + + +MPF G L ++ + D + ++ KG++YL
Sbjct: 83 LGICLTSTVQLITQLMPF---GXLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLEDRRL 138
Query: 133 IHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVG-TPC-WMAPEVMEQLH 190
+HRD+ + N+L+ +K+ DFG++ L G ++ + G P WMA E + LH
Sbjct: 139 VHRDLAARNVLVKTPQHVKITDFGLAKLL---GAEEKEYHAEGGKVPIKWMALESI--LH 193
Query: 191 G-YDFKADIWSFGITALEL-AHGHAPFSKYPPMKV--LLMTLQNAPPGLDYERDRKFSKS 246
Y ++D+WS+G+T EL G P+ P ++ +L + P + +
Sbjct: 194 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLP------QPPICTID 247
Query: 247 FKQMIASCLVKDPSKRPSAKKLLKHSFFKQAR 278
++ C + D RP ++L+ F K AR
Sbjct: 248 VYMIMVKCWMIDADSRPKFRELII-EFSKMAR 278
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 76/153 (49%), Gaps = 4/153 (2%)
Query: 119 EVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTP 178
+V KG+++L IHRD+ + NIL+ + +K+ DFG++ ++ D R + +
Sbjct: 156 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPLK 215
Query: 179 CWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYE 238
WMAPE + Y ++D+WSFG+ E+ A S YP +K+ + G
Sbjct: 216 -WMAPETIFD-RVYTIQSDVWSFGVLLWEIFSLGA--SPYPGVKIDEEFCRRLKEGTRMR 271
Query: 239 RDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKH 271
+ Q + C +PS+RP+ +L++H
Sbjct: 272 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 81/190 (42%), Gaps = 32/190 (16%)
Query: 113 IATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN 172
+ ++ ++L+GL Y+H IHRD+K N+ ++ +K+ DFG++ D
Sbjct: 134 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE------MT 187
Query: 173 TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 231
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 188 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 247
Query: 232 PPG------LDYERDRKFSKSFKQM-------------------IASCLVKDPSKRPSAK 266
PG + E R + +S QM + LV D KR +A
Sbjct: 248 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 307
Query: 267 KLLKHSFFKQ 276
+ L H++F Q
Sbjct: 308 QALAHAYFAQ 317
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 81/190 (42%), Gaps = 32/190 (16%)
Query: 113 IATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN 172
+ ++ ++L+GL Y+H IHRD+K N+ ++ +K+ DFG++ D
Sbjct: 134 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE------MT 187
Query: 173 TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 231
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 188 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 247
Query: 232 PPG------LDYERDRKFSKSFKQM-------------------IASCLVKDPSKRPSAK 266
PG + E R + +S QM + LV D KR +A
Sbjct: 248 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 307
Query: 267 KLLKHSFFKQ 276
+ L H++F Q
Sbjct: 308 QALAHAYFAQ 317
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 76/153 (49%), Gaps = 4/153 (2%)
Query: 119 EVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTP 178
+V KG+++L IHRD+ + NIL+ + +K+ DFG++ ++ D R + +
Sbjct: 206 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 265
Query: 179 CWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYE 238
WMAPE + Y ++D+WSFG+ E+ A S YP +K+ + G
Sbjct: 266 -WMAPETIFD-RVYTIQSDVWSFGVLLWEIFSLGA--SPYPGVKIDEEFCRRLKEGTRMR 321
Query: 239 RDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKH 271
+ Q + C +PS+RP+ +L++H
Sbjct: 322 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 354
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 76/153 (49%), Gaps = 4/153 (2%)
Query: 119 EVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTP 178
+V KG+++L IHRD+ + NIL+ + +K+ DFG++ ++ D R + +
Sbjct: 158 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 217
Query: 179 CWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYE 238
WMAPE + Y ++D+WSFG+ E+ A S YP +K+ + G
Sbjct: 218 -WMAPETIFD-RVYTIQSDVWSFGVLLWEIFSLGA--SPYPGVKIDEEFCRRLKEGTRMR 273
Query: 239 RDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKH 271
+ Q + C +PS+RP+ +L++H
Sbjct: 274 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 306
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 76/153 (49%), Gaps = 4/153 (2%)
Query: 119 EVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTP 178
+V KG+++L IHRD+ + NIL+ + +K+ DFG++ ++ D R + +
Sbjct: 156 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 215
Query: 179 CWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYE 238
WMAPE + Y ++D+WSFG+ E+ A S YP +K+ + G
Sbjct: 216 -WMAPETIFD-RVYTIQSDVWSFGVLLWEIFSLGA--SPYPGVKIDEEFCRRLKEGTRMR 271
Query: 239 RDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKH 271
+ Q + C +PS+RP+ +L++H
Sbjct: 272 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 81/190 (42%), Gaps = 32/190 (16%)
Query: 113 IATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN 172
+ ++ ++L+GL Y+H IHRD+K N+ ++ +K+ DFG++ D
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE------MT 180
Query: 173 TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 231
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
Query: 232 PPG------LDYERDRKFSKSFKQM-------------------IASCLVKDPSKRPSAK 266
PG + E R + +S QM + LV D KR +A
Sbjct: 241 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 267 KLLKHSFFKQ 276
+ L H++F Q
Sbjct: 301 QALAHAYFAQ 310
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 91/191 (47%), Gaps = 6/191 (3%)
Query: 40 AVKILDFERDNSDLSNISREAQTMILVDHPNVLKS-HCSFVSDHNLWVVMPFMSGGSCLH 98
AVK L+ D ++S E M HPNVL S+ + VV+P+M G +
Sbjct: 121 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 180
Query: 99 ILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVS 158
++ + + +I L +V KG+ +L +HRD+ + N ++D + +K+ DFG++
Sbjct: 181 FIRNETHNPTVKDLIGFGL-QVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLA 239
Query: 159 ACLFDSGDRQRMRNTFVGTPC-WMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSK 217
++D T P WMA E + Q + K+D+WSFG+ EL AP
Sbjct: 240 RDMYDKEFDSVHNKTGAKLPVKWMALESL-QTQKFTTKSDVWSFGVLLWELMTRGAP--P 296
Query: 218 YPPMKVLLMTL 228
YP + +T+
Sbjct: 297 YPDVNTFDITV 307
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 81/190 (42%), Gaps = 32/190 (16%)
Query: 113 IATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN 172
+ ++ ++L+GL Y+H IHRD+K N+ ++ +K+ DFG++ D
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE------MA 180
Query: 173 TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 231
FV T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 181 GFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
Query: 232 PPG------LDYERDRKFSKSFKQM-------------------IASCLVKDPSKRPSAK 266
PG + E R + +S QM + LV D KR +A
Sbjct: 241 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 267 KLLKHSFFKQ 276
+ L H++F Q
Sbjct: 301 QALAHAYFAQ 310
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 106/244 (43%), Gaps = 47/244 (19%)
Query: 67 DHPNVLKSHCSFVSDHNLWVVMPFMS------------GGSCLHILKAAYPDGFEEVVIA 114
DHPNV++ +CS +D L++ + + L + K P
Sbjct: 67 DHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNP--------I 118
Query: 115 TILREVLKGLDYLHHHGHIHRDVKSGNILIDVR---------GA----IKLGDFGVSACL 161
++LR++ G+ +LH IHRD+K NIL+ GA I + DFG+ L
Sbjct: 119 SLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL 178
Query: 162 FDSGD---RQRMRNTFVGTPCWMAPEVMEQLHGYDFK------ADIWSFG-ITALELAHG 211
DSG R + N GT W APE++E+ + K DI+S G + L+ G
Sbjct: 179 -DSGQSSFRTNLNNP-SGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKG 236
Query: 212 HAPFS-KYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLK 270
PF KY ++ + + + DR +I+ + DP KRP+A K+L+
Sbjct: 237 KHPFGDKYSRESNIIRGIFSLDE-MKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295
Query: 271 HSFF 274
H F
Sbjct: 296 HPLF 299
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 76/153 (49%), Gaps = 4/153 (2%)
Query: 119 EVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTP 178
+V KG+++L IHRD+ + NIL+ + +K+ DFG++ ++ D R + +
Sbjct: 193 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 252
Query: 179 CWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYE 238
WMAPE + Y ++D+WSFG+ E+ A S YP +K+ + G
Sbjct: 253 -WMAPETIFD-RVYTIQSDVWSFGVLLWEIFSLGA--SPYPGVKIDEEFCRRLKEGTRMR 308
Query: 239 RDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKH 271
+ Q + C +PS+RP+ +L++H
Sbjct: 309 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 341
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 76/153 (49%), Gaps = 4/153 (2%)
Query: 119 EVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTP 178
+V KG+++L IHRD+ + NIL+ + +K+ DFG++ ++ D R + +
Sbjct: 208 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 267
Query: 179 CWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYE 238
WMAPE + Y ++D+WSFG+ E+ A S YP +K+ + G
Sbjct: 268 -WMAPETIFD-RVYTIQSDVWSFGVLLWEIFSLGA--SPYPGVKIDEEFCRRLKEGTRMR 323
Query: 239 RDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKH 271
+ Q + C +PS+RP+ +L++H
Sbjct: 324 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 356
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 106/244 (43%), Gaps = 47/244 (19%)
Query: 67 DHPNVLKSHCSFVSDHNLWVVMPFMS------------GGSCLHILKAAYPDGFEEVVIA 114
DHPNV++ +CS +D L++ + + L + K P
Sbjct: 67 DHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNP--------I 118
Query: 115 TILREVLKGLDYLHHHGHIHRDVKSGNILIDVR---------GA----IKLGDFGVSACL 161
++LR++ G+ +LH IHRD+K NIL+ GA I + DFG+ L
Sbjct: 119 SLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL 178
Query: 162 FDSGD---RQRMRNTFVGTPCWMAPEVMEQLHGYDFK------ADIWSFG-ITALELAHG 211
DSG R + N GT W APE++E+ + K DI+S G + L+ G
Sbjct: 179 -DSGQXXFRXNLNNP-SGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKG 236
Query: 212 HAPFS-KYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLK 270
PF KY ++ + + + DR +I+ + DP KRP+A K+L+
Sbjct: 237 KHPFGDKYSRESNIIRGIFSLDE-MKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295
Query: 271 HSFF 274
H F
Sbjct: 296 HPLF 299
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 81/190 (42%), Gaps = 32/190 (16%)
Query: 113 IATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN 172
+ ++ ++L+GL Y+H IHRD+K N+ ++ +K+ DFG++ D
Sbjct: 132 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE------MT 185
Query: 173 TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 231
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 186 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 245
Query: 232 PPG------LDYERDRKFSKSFKQM-------------------IASCLVKDPSKRPSAK 266
PG + E R + +S QM + LV D KR +A
Sbjct: 246 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 305
Query: 267 KLLKHSFFKQ 276
+ L H++F Q
Sbjct: 306 QALAHAYFAQ 315
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 76/153 (49%), Gaps = 4/153 (2%)
Query: 119 EVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTP 178
+V KG+++L IHRD+ + NIL+ + +K+ DFG++ ++ D R + +
Sbjct: 147 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 206
Query: 179 CWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYE 238
WMAPE + Y ++D+WSFG+ E+ A S YP +K+ + G
Sbjct: 207 -WMAPETIFD-RVYTIQSDVWSFGVLLWEIFSLGA--SPYPGVKIDEEFCRRLKEGTRMR 262
Query: 239 RDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKH 271
+ Q + C +PS+RP+ +L++H
Sbjct: 263 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 81/190 (42%), Gaps = 32/190 (16%)
Query: 113 IATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN 172
+ ++ ++L+GL Y+H IHRD+K N+ ++ +K+ DFG++ D
Sbjct: 132 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE------MT 185
Query: 173 TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 231
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 186 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 245
Query: 232 PPG------LDYERDRKFSKSFKQM-------------------IASCLVKDPSKRPSAK 266
PG + E R + +S QM + LV D KR +A
Sbjct: 246 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 305
Query: 267 KLLKHSFFKQ 276
+ L H++F Q
Sbjct: 306 QALAHAYFAQ 315
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 81/190 (42%), Gaps = 32/190 (16%)
Query: 113 IATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN 172
+ ++ ++L+GL Y+H IHRD+K N+ ++ +K+ DFG++ D
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE------MA 180
Query: 173 TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 231
FV T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 181 GFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
Query: 232 PPG------LDYERDRKFSKSFKQM-------------------IASCLVKDPSKRPSAK 266
PG + E R + +S QM + LV D KR +A
Sbjct: 241 TPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 267 KLLKHSFFKQ 276
+ L H++F Q
Sbjct: 301 QALAHAYFAQ 310
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 120/301 (39%), Gaps = 47/301 (15%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHP- 69
E Y VG G SV A VAVK L R + + R + + L+ H
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKL--SRPFQSIIHAKRTYRELRLLKHMK 75
Query: 70 --------NVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVL 121
+V S +++++V M G +I+K A + + ++ ++L
Sbjct: 76 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCA---KLTDDHVQFLIYQIL 131
Query: 122 KGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWM 181
+GL Y+H IHRD+K N+ ++ +K+ DFG++ D +V T +
Sbjct: 132 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE------MTGYVATRWYR 185
Query: 182 APEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NAPPG------ 234
APE+M Y+ DIWS G EL G F + L + L+ PG
Sbjct: 186 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 245
Query: 235 LDYERDRKFSKSFKQM-------------------IASCLVKDPSKRPSAKKLLKHSFFK 275
+ E R + +S QM + LV D KR +A + L H++F
Sbjct: 246 ISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 305
Query: 276 Q 276
Q
Sbjct: 306 Q 306
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 76/153 (49%), Gaps = 4/153 (2%)
Query: 119 EVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTP 178
+V KG+++L IHRD+ + NIL+ + +K+ DFG++ ++ D R + +
Sbjct: 201 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 260
Query: 179 CWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYE 238
WMAPE + Y ++D+WSFG+ E+ A S YP +K+ + G
Sbjct: 261 -WMAPETIFD-RVYTIQSDVWSFGVLLWEIFSLGA--SPYPGVKIDEEFCRRLKEGTRMR 316
Query: 239 RDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKH 271
+ Q + C +PS+RP+ +L++H
Sbjct: 317 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 349
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 81/190 (42%), Gaps = 32/190 (16%)
Query: 113 IATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN 172
+ ++ ++L+GL Y+H IHRD+K N+ ++ +K+ DFG++ D
Sbjct: 138 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE------MT 191
Query: 173 TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 231
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 192 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 251
Query: 232 PPG------LDYERDRKFSKSFKQM-------------------IASCLVKDPSKRPSAK 266
PG + E R + +S QM + LV D KR +A
Sbjct: 252 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 311
Query: 267 KLLKHSFFKQ 276
+ L H++F Q
Sbjct: 312 QALAHAYFAQ 321
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 76/153 (49%), Gaps = 4/153 (2%)
Query: 119 EVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTP 178
+V KG+++L IHRD+ + NIL+ + +K+ DFG++ ++ D R + +
Sbjct: 147 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 206
Query: 179 CWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYE 238
WMAPE + Y ++D+WSFG+ E+ A S YP +K+ + G
Sbjct: 207 -WMAPETIFD-RVYTIQSDVWSFGVLLWEIFSLGA--SPYPGVKIDEEFCRRLKEGTRMR 262
Query: 239 RDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKH 271
+ Q + C +PS+RP+ +L++H
Sbjct: 263 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 121/272 (44%), Gaps = 28/272 (10%)
Query: 19 VGQGVSASVHRALCIPFNEIVA--VKILDFERDNSDLSN--ISREAQTMILVDHPNV--L 72
+G G +V++ L IP E V V I + S +N I EA M VD+P+V L
Sbjct: 20 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 79
Query: 73 KSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGH 132
C + + +MPF CL + D + ++ +G++YL
Sbjct: 80 LGICLTSTVQLITQLMPF----GCLLDYVREHKDNIGSQYLLNWCVQIAEGMNYLEDRRL 135
Query: 133 IHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVG-TPC-WMAPEVMEQLH 190
+HRD+ + N+L+ +K+ DFG++ L G ++ + G P WMA E + LH
Sbjct: 136 VHRDLAARNVLVKTPQHVKITDFGLAKLL---GAEEKEYHAEGGKVPIKWMALESI--LH 190
Query: 191 G-YDFKADIWSFGITALEL-AHGHAPFSKYPPMKV--LLMTLQNAPPGLDYERDRKFSKS 246
Y ++D+WS+G+T EL G P+ P ++ +L + P + +
Sbjct: 191 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLP------QPPICTID 244
Query: 247 FKQMIASCLVKDPSKRPSAKKLLKHSFFKQAR 278
++ C + D RP ++L+ F K AR
Sbjct: 245 VYMIMVKCWMIDADSRPKFRELII-EFSKMAR 275
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 81/190 (42%), Gaps = 32/190 (16%)
Query: 113 IATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN 172
+ ++ ++L+GL Y+H IHRD+K N+ ++ +K+ DFG++ D
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE------MT 180
Query: 173 TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 231
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
Query: 232 PPG------LDYERDRKFSKSFKQM-------------------IASCLVKDPSKRPSAK 266
PG + E R + +S QM + LV D KR +A
Sbjct: 241 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 267 KLLKHSFFKQ 276
+ L H++F Q
Sbjct: 301 QALAHAYFAQ 310
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 76/153 (49%), Gaps = 4/153 (2%)
Query: 119 EVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTP 178
+V KG+++L IHRD+ + NIL+ + +K+ DFG++ ++ D R + +
Sbjct: 199 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 258
Query: 179 CWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYE 238
WMAPE + Y ++D+WSFG+ E+ A S YP +K+ + G
Sbjct: 259 -WMAPETIFD-RVYTIQSDVWSFGVLLWEIFSLGA--SPYPGVKIDEEFCRRLKEGTRMR 314
Query: 239 RDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKH 271
+ Q + C +PS+RP+ +L++H
Sbjct: 315 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 347
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 81/190 (42%), Gaps = 32/190 (16%)
Query: 113 IATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN 172
+ ++ ++L+GL Y+H IHRD+K N+ ++ +K+ DFG++ D
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE------MT 180
Query: 173 TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 231
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
Query: 232 PPG------LDYERDRKFSKSFKQM-------------------IASCLVKDPSKRPSAK 266
PG + E R + +S QM + LV D KR +A
Sbjct: 241 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 267 KLLKHSFFKQ 276
+ L H++F Q
Sbjct: 301 QALAHAYFAQ 310
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 83/181 (45%), Gaps = 9/181 (4%)
Query: 39 VAVKILDFERDNSDLSNISREAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLH 98
VA+K L + EA M H N+++ + ++ +M G+
Sbjct: 76 VAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDK 135
Query: 99 ILKAAYPDG-FEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGV 157
L+ DG F + + +LR + G+ YL + ++HRD+ + NIL++ K+ DFG+
Sbjct: 136 FLREK--DGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGL 193
Query: 158 SACLFDSGDRQRMRNTFVG-TPC-WMAPEVMEQLHGYDFKADIWSFGITALE-LAHGHAP 214
S L D D + T G P W APE + + +D+WSFGI E + +G P
Sbjct: 194 SRVLED--DPEATYTTSGGKIPIRWTAPEAI-SYRKFTSASDVWSFGIVMWEVMTYGERP 250
Query: 215 F 215
+
Sbjct: 251 Y 251
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 81/190 (42%), Gaps = 32/190 (16%)
Query: 113 IATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN 172
+ ++ ++L+GL Y+H IHRD+K N+ ++ +K+ DFG++ D
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE------MT 180
Query: 173 TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 231
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
Query: 232 PPG------LDYERDRKFSKSFKQM-------------------IASCLVKDPSKRPSAK 266
PG + E R + +S QM + LV D KR +A
Sbjct: 241 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 267 KLLKHSFFKQ 276
+ L H++F Q
Sbjct: 301 QALAHAYFAQ 310
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 111/243 (45%), Gaps = 21/243 (8%)
Query: 39 VAVKILDFERDNS---DLSNISREAQTMILVDHPNVLK--SHCSFVSDHNL---WVVMPF 90
VAVK + DNS ++ EA M HPNV++ C +S + V++PF
Sbjct: 65 VAVKTMKL--DNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPF 122
Query: 91 MSGGSC-LHILKAAYPDGFEEVVIATILR---EVLKGLDYLHHHGHIHRDVKSGNILIDV 146
M G ++L + G + + + T+L+ ++ G++YL + +HRD+ + N ++
Sbjct: 123 MKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRD 182
Query: 147 RGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITAL 206
+ + DFG+S ++ SGD R W+A E + Y K+D+W+FG+T
Sbjct: 183 DMTVCVADFGLSKKIY-SGDYYRQGRIAKMPVKWIAIESLAD-RVYTSKSDVWAFGVTMW 240
Query: 207 ELA-HGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSA 265
E+A G P+ ++ L G ++ +++ SC DP RP+
Sbjct: 241 EIATRGMTPYPGVQNHEMYDYLLH----GHRLKQPEDCLDELYEIMYSCWRTDPLDRPTF 296
Query: 266 KKL 268
L
Sbjct: 297 SVL 299
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 80/190 (42%), Gaps = 32/190 (16%)
Query: 113 IATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN 172
+ ++ ++L+GL Y+H IHRD+K N+ ++ +K+ DFG+ D
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDE------MT 180
Query: 173 TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 231
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
Query: 232 PPG------LDYERDRKFSKSFKQM-------------------IASCLVKDPSKRPSAK 266
PG + E R + +S QM + LV D KR +A
Sbjct: 241 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 267 KLLKHSFFKQ 276
+ L H++F Q
Sbjct: 301 QALAHAYFAQ 310
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 81/190 (42%), Gaps = 32/190 (16%)
Query: 113 IATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN 172
+ ++ ++L+GL Y+H IHRD+K N+ ++ +K+ DFG++ D
Sbjct: 139 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE------MT 192
Query: 173 TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 231
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 193 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 252
Query: 232 PPG------LDYERDRKFSKSFKQM-------------------IASCLVKDPSKRPSAK 266
PG + E R + +S QM + LV D KR +A
Sbjct: 253 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 312
Query: 267 KLLKHSFFKQ 276
+ L H++F Q
Sbjct: 313 QALAHAYFAQ 322
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 81/190 (42%), Gaps = 32/190 (16%)
Query: 113 IATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN 172
+ ++ ++L+GL Y+H IHRD+K N+ ++ +K+ DFG++ D
Sbjct: 139 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE------MT 192
Query: 173 TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 231
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 193 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 252
Query: 232 PPG------LDYERDRKFSKSFKQM-------------------IASCLVKDPSKRPSAK 266
PG + E R + +S QM + LV D KR +A
Sbjct: 253 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 312
Query: 267 KLLKHSFFKQ 276
+ L H++F Q
Sbjct: 313 QALAHAYFAQ 322
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 81/190 (42%), Gaps = 32/190 (16%)
Query: 113 IATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN 172
+ ++ ++L+GL Y+H IHRD+K N+ ++ +K+ DFG++ D
Sbjct: 134 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE------MT 187
Query: 173 TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 231
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 188 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 247
Query: 232 PPG------LDYERDRKFSKSFKQM-------------------IASCLVKDPSKRPSAK 266
PG + E R + +S QM + LV D KR +A
Sbjct: 248 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 307
Query: 267 KLLKHSFFKQ 276
+ L H++F Q
Sbjct: 308 QALAHAYFAQ 317
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 81/190 (42%), Gaps = 32/190 (16%)
Query: 113 IATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN 172
+ ++ ++L+GL Y+H IHRD+K N+ ++ +K+ DFG++ D
Sbjct: 139 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE------MT 192
Query: 173 TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 231
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 193 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 252
Query: 232 PPG------LDYERDRKFSKSFKQM-------------------IASCLVKDPSKRPSAK 266
PG + E R + +S QM + LV D KR +A
Sbjct: 253 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 312
Query: 267 KLLKHSFFKQ 276
+ L H++F Q
Sbjct: 313 QALAHAYFAQ 322
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 81/190 (42%), Gaps = 32/190 (16%)
Query: 113 IATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN 172
+ ++ ++L+GL Y+H IHRD+K N+ ++ +K+ DFG++ D
Sbjct: 132 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE------MT 185
Query: 173 TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 231
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 186 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 245
Query: 232 PPG------LDYERDRKFSKSFKQM-------------------IASCLVKDPSKRPSAK 266
PG + E R + +S QM + LV D KR +A
Sbjct: 246 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 305
Query: 267 KLLKHSFFKQ 276
+ L H++F Q
Sbjct: 306 QALAHAYFAQ 315
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 81/190 (42%), Gaps = 32/190 (16%)
Query: 113 IATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN 172
+ ++ ++L+GL Y+H IHRD+K N+ ++ +K+ DFG++ D
Sbjct: 133 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE------MT 186
Query: 173 TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 231
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 187 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 246
Query: 232 PPG------LDYERDRKFSKSFKQM-------------------IASCLVKDPSKRPSAK 266
PG + E R + +S QM + LV D KR +A
Sbjct: 247 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 306
Query: 267 KLLKHSFFKQ 276
+ L H++F Q
Sbjct: 307 QALAHAYFAQ 316
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 81/190 (42%), Gaps = 32/190 (16%)
Query: 113 IATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN 172
+ ++ ++L+GL Y+H IHRD+K N+ ++ +K+ DFG++ D
Sbjct: 126 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE------MT 179
Query: 173 TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 231
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 180 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 239
Query: 232 PPG------LDYERDRKFSKSFKQM-------------------IASCLVKDPSKRPSAK 266
PG + E R + +S QM + LV D KR +A
Sbjct: 240 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 299
Query: 267 KLLKHSFFKQ 276
+ L H++F Q
Sbjct: 300 QALAHAYFAQ 309
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 81/190 (42%), Gaps = 32/190 (16%)
Query: 113 IATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN 172
+ ++ ++L+GL Y+H IHRD+K N+ ++ +K+ DFG++ D
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE------MT 180
Query: 173 TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 231
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
Query: 232 PPG------LDYERDRKFSKSFKQM-------------------IASCLVKDPSKRPSAK 266
PG + E R + +S QM + LV D KR +A
Sbjct: 241 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 267 KLLKHSFFKQ 276
+ L H++F Q
Sbjct: 301 QALAHAYFAQ 310
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 81/190 (42%), Gaps = 32/190 (16%)
Query: 113 IATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN 172
+ ++ ++L+GL Y+H IHRD+K N+ ++ +K+ DFG++ D
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE------MT 180
Query: 173 TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 231
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
Query: 232 PPG------LDYERDRKFSKSFKQM-------------------IASCLVKDPSKRPSAK 266
PG + E R + +S QM + LV D KR +A
Sbjct: 241 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 267 KLLKHSFFKQ 276
+ L H++F Q
Sbjct: 301 QALAHAYFAQ 310
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 119/269 (44%), Gaps = 28/269 (10%)
Query: 22 GVSASVHRALCIPFNEIVA--VKILDFERDNSDLSN--ISREAQTMILVDHPNV--LKSH 75
G +V++ L IP E V V I + S +N I EA M VD+P+V L
Sbjct: 33 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 92
Query: 76 CSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHR 135
C + + +MPF CL + D + ++ KG++YL +HR
Sbjct: 93 CLTSTVQLIMQLMPF----GCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHR 148
Query: 136 DVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVG-TPC-WMAPEVMEQLHG-Y 192
D+ + N+L+ +K+ DFG++ L G ++ + G P WMA E + LH Y
Sbjct: 149 DLAARNVLVKTPQHVKITDFGLAKLL---GAEEKEYHAEGGKVPIKWMALESI--LHRIY 203
Query: 193 DFKADIWSFGITALEL-AHGHAPFSKYPPMKV--LLMTLQNAPPGLDYERDRKFSKSFKQ 249
++D+WS+G+T EL G P+ P ++ +L + P + +
Sbjct: 204 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLP------QPPICTIDVYM 257
Query: 250 MIASCLVKDPSKRPSAKKLLKHSFFKQAR 278
++ C + D RP ++L+ F K AR
Sbjct: 258 IMVKCWMIDADSRPKFRELIIE-FSKMAR 285
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 81/190 (42%), Gaps = 32/190 (16%)
Query: 113 IATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN 172
+ ++ ++L+GL Y+H IHRD+K N+ ++ +K+ DFG++ D
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE------MT 180
Query: 173 TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 231
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
Query: 232 PPG------LDYERDRKFSKSFKQM-------------------IASCLVKDPSKRPSAK 266
PG + E R + +S QM + LV D KR +A
Sbjct: 241 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 267 KLLKHSFFKQ 276
+ L H++F Q
Sbjct: 301 QALAHAYFAQ 310
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 85/208 (40%), Gaps = 9/208 (4%)
Query: 13 YTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPNVL 72
YT + +G+G V A VA+K + + RE Q ++ H NV+
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVI 104
Query: 73 KSH-----CSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYL 127
+ + ++++V M +LK+ I L ++L+GL Y+
Sbjct: 105 GIRDILRASTLEAMRDVYIVQDLMET-DLYKLLKS---QQLSNDHICYFLYQILRGLKYI 160
Query: 128 HHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVME 187
H +HRD+K N+LI+ +K+ DFG++ D V T + APE+M
Sbjct: 161 HSANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIML 220
Query: 188 QLHGYDFKADIWSFGITALELAHGHAPF 215
GY DIWS G E+ F
Sbjct: 221 NSKGYTKSIDIWSVGCILAEMLSNRPIF 248
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 81/190 (42%), Gaps = 32/190 (16%)
Query: 113 IATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN 172
+ ++ ++L+GL Y+H IHRD+K N+ ++ +K+ DFG++ D
Sbjct: 138 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE------MT 191
Query: 173 TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 231
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 192 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 251
Query: 232 PPG------LDYERDRKFSKSFKQM-------------------IASCLVKDPSKRPSAK 266
PG + E R + +S QM + LV D KR +A
Sbjct: 252 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 311
Query: 267 KLLKHSFFKQ 276
+ L H++F Q
Sbjct: 312 QALAHAYFAQ 321
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 81/190 (42%), Gaps = 32/190 (16%)
Query: 113 IATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN 172
+ ++ ++L+GL Y+H IHRD+K N+ ++ +K+ DFG++ D
Sbjct: 129 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE------MT 182
Query: 173 TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 231
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 183 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 242
Query: 232 PPG------LDYERDRKFSKSFKQM-------------------IASCLVKDPSKRPSAK 266
PG + E R + +S QM + LV D KR +A
Sbjct: 243 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 302
Query: 267 KLLKHSFFKQ 276
+ L H++F Q
Sbjct: 303 QALAHAYFAQ 312
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 81/190 (42%), Gaps = 32/190 (16%)
Query: 113 IATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN 172
+ ++ ++L+GL Y+H IHRD+K N+ ++ +K+ DFG++ D
Sbjct: 129 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE------MT 182
Query: 173 TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 231
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 183 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 242
Query: 232 PPG------LDYERDRKFSKSFKQM-------------------IASCLVKDPSKRPSAK 266
PG + E R + +S QM + LV D KR +A
Sbjct: 243 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 302
Query: 267 KLLKHSFFKQ 276
+ L H++F Q
Sbjct: 303 QALAHAYFAQ 312
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 91/191 (47%), Gaps = 6/191 (3%)
Query: 40 AVKILDFERDNSDLSNISREAQTMILVDHPNVLKS-HCSFVSDHNLWVVMPFMSGGSCLH 98
AVK L+ D ++S E M HPNVL S+ + VV+P+M G +
Sbjct: 60 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 119
Query: 99 ILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVS 158
++ + + +I L +V KG+ +L +HRD+ + N ++D + +K+ DFG++
Sbjct: 120 FIRNETHNPTVKDLIGFGL-QVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLA 178
Query: 159 ACLFDSGDRQRMRNTFVGTPC-WMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSK 217
++D T P WMA E + Q + K+D+WSFG+ EL AP
Sbjct: 179 RDMYDKEFDSVHNKTGAKLPVKWMALESL-QTQKFTTKSDVWSFGVLLWELMTRGAP--P 235
Query: 218 YPPMKVLLMTL 228
YP + +T+
Sbjct: 236 YPDVNTFDITV 246
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 81/190 (42%), Gaps = 32/190 (16%)
Query: 113 IATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN 172
+ ++ ++L+GL Y+H IHRD+K N+ ++ +K+ DFG++ D
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE------MT 180
Query: 173 TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 231
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
Query: 232 PPG------LDYERDRKFSKSFKQM-------------------IASCLVKDPSKRPSAK 266
PG + E R + +S QM + LV D KR +A
Sbjct: 241 TPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 267 KLLKHSFFKQ 276
+ L H++F Q
Sbjct: 301 QALAHAYFAQ 310
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 91/191 (47%), Gaps = 6/191 (3%)
Query: 40 AVKILDFERDNSDLSNISREAQTMILVDHPNVLKS-HCSFVSDHNLWVVMPFMSGGSCLH 98
AVK L+ D ++S E M HPNVL S+ + VV+P+M G +
Sbjct: 62 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 121
Query: 99 ILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVS 158
++ + + +I L +V KG+ +L +HRD+ + N ++D + +K+ DFG++
Sbjct: 122 FIRNETHNPTVKDLIGFGL-QVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLA 180
Query: 159 ACLFDSGDRQRMRNTFVGTPC-WMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSK 217
++D T P WMA E + Q + K+D+WSFG+ EL AP
Sbjct: 181 RDMYDKEFDSVHNKTGAKLPVKWMALESL-QTQKFTTKSDVWSFGVLLWELMTRGAP--P 237
Query: 218 YPPMKVLLMTL 228
YP + +T+
Sbjct: 238 YPDVNTFDITV 248
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 91/191 (47%), Gaps = 6/191 (3%)
Query: 40 AVKILDFERDNSDLSNISREAQTMILVDHPNVLKS-HCSFVSDHNLWVVMPFMSGGSCLH 98
AVK L+ D ++S E M HPNVL S+ + VV+P+M G +
Sbjct: 63 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 122
Query: 99 ILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVS 158
++ + + +I L +V KG+ +L +HRD+ + N ++D + +K+ DFG++
Sbjct: 123 FIRNETHNPTVKDLIGFGL-QVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLA 181
Query: 159 ACLFDSGDRQRMRNTFVGTPC-WMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSK 217
++D T P WMA E + Q + K+D+WSFG+ EL AP
Sbjct: 182 RDMYDKEFDSVHNKTGAKLPVKWMALESL-QTQKFTTKSDVWSFGVLLWELMTRGAP--P 238
Query: 218 YPPMKVLLMTL 228
YP + +T+
Sbjct: 239 YPDVNTFDITV 249
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 81/190 (42%), Gaps = 32/190 (16%)
Query: 113 IATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN 172
+ ++ ++L+GL Y+H IHRD+K N+ ++ +K+ DFG++ D
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE------MT 180
Query: 173 TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 231
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
Query: 232 PPG------LDYERDRKFSKSFKQM-------------------IASCLVKDPSKRPSAK 266
PG + E R + +S QM + LV D KR +A
Sbjct: 241 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 267 KLLKHSFFKQ 276
+ L H++F Q
Sbjct: 301 QALAHAYFAQ 310
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 91/191 (47%), Gaps = 6/191 (3%)
Query: 40 AVKILDFERDNSDLSNISREAQTMILVDHPNVLKS-HCSFVSDHNLWVVMPFMSGGSCLH 98
AVK L+ D ++S E M HPNVL S+ + VV+P+M G +
Sbjct: 62 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 121
Query: 99 ILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVS 158
++ + + +I L +V KG+ +L +HRD+ + N ++D + +K+ DFG++
Sbjct: 122 FIRNETHNPTVKDLIGFGL-QVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLA 180
Query: 159 ACLFDSGDRQRMRNTFVGTPC-WMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSK 217
++D T P WMA E + Q + K+D+WSFG+ EL AP
Sbjct: 181 RDMYDKEFDSVHNKTGAKLPVKWMALESL-QTQKFTTKSDVWSFGVLLWELMTRGAP--P 237
Query: 218 YPPMKVLLMTL 228
YP + +T+
Sbjct: 238 YPDVNTFDITV 248
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 81/190 (42%), Gaps = 32/190 (16%)
Query: 113 IATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN 172
+ ++ ++L+GL Y+H IHRD+K N+ ++ +K+ DFG++ D
Sbjct: 150 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE------MX 203
Query: 173 TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 231
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 204 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 263
Query: 232 PPG------LDYERDRKFSKSFKQM-------------------IASCLVKDPSKRPSAK 266
PG + E R + +S QM + LV D KR +A
Sbjct: 264 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 323
Query: 267 KLLKHSFFKQ 276
+ L H++F Q
Sbjct: 324 QALAHAYFAQ 333
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 81/190 (42%), Gaps = 32/190 (16%)
Query: 113 IATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN 172
+ ++ ++L+GL Y+H IHRD+K N+ ++ +K+ DFG++ D
Sbjct: 137 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE------MT 190
Query: 173 TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 231
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 191 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 250
Query: 232 PPG------LDYERDRKFSKSFKQM-------------------IASCLVKDPSKRPSAK 266
PG + E R + +S QM + LV D KR +A
Sbjct: 251 TPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 310
Query: 267 KLLKHSFFKQ 276
+ L H++F Q
Sbjct: 311 QALAHAYFAQ 320
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 81/190 (42%), Gaps = 32/190 (16%)
Query: 113 IATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN 172
+ ++ ++L+GL Y+H IHRD+K N+ ++ +K+ DFG++ D
Sbjct: 129 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE------MT 182
Query: 173 TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 231
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 183 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 242
Query: 232 PPG------LDYERDRKFSKSFKQM-------------------IASCLVKDPSKRPSAK 266
PG + E R + +S QM + LV D KR +A
Sbjct: 243 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 302
Query: 267 KLLKHSFFKQ 276
+ L H++F Q
Sbjct: 303 QALAHAYFAQ 312
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 81/190 (42%), Gaps = 32/190 (16%)
Query: 113 IATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN 172
+ ++ ++L+GL Y+H IHRD+K N+ ++ +K+ DFG++ D
Sbjct: 146 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE------MT 199
Query: 173 TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 231
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 200 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 259
Query: 232 PPG------LDYERDRKFSKSFKQM-------------------IASCLVKDPSKRPSAK 266
PG + E R + +S QM + LV D KR +A
Sbjct: 260 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 319
Query: 267 KLLKHSFFKQ 276
+ L H++F Q
Sbjct: 320 QALAHAYFAQ 329
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 81/190 (42%), Gaps = 32/190 (16%)
Query: 113 IATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN 172
+ ++ ++L+GL Y+H IHRD+K N+ ++ +K+ DFG++ D
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE------MT 180
Query: 173 TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 231
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 181 GYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
Query: 232 PPG------LDYERDRKFSKSFKQM-------------------IASCLVKDPSKRPSAK 266
PG + E R + +S QM + LV D KR +A
Sbjct: 241 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 267 KLLKHSFFKQ 276
+ L H++F Q
Sbjct: 301 QALAHAYFAQ 310
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 81/190 (42%), Gaps = 32/190 (16%)
Query: 113 IATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN 172
+ ++ ++L+GL Y+H IHRD+K N+ ++ +K+ DFG++ D
Sbjct: 147 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE------MT 200
Query: 173 TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 231
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 201 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 260
Query: 232 PPG------LDYERDRKFSKSFKQM-------------------IASCLVKDPSKRPSAK 266
PG + E R + +S QM + LV D KR +A
Sbjct: 261 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 320
Query: 267 KLLKHSFFKQ 276
+ L H++F Q
Sbjct: 321 QALAHAYFAQ 330
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 81/190 (42%), Gaps = 32/190 (16%)
Query: 113 IATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN 172
+ ++ ++L+GL Y+H IHRD+K N+ ++ +K+ DFG++ D
Sbjct: 150 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE------MT 203
Query: 173 TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 231
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 204 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 263
Query: 232 PPG------LDYERDRKFSKSFKQM-------------------IASCLVKDPSKRPSAK 266
PG + E R + +S QM + LV D KR +A
Sbjct: 264 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 323
Query: 267 KLLKHSFFKQ 276
+ L H++F Q
Sbjct: 324 QALAHAYFAQ 333
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 81/190 (42%), Gaps = 32/190 (16%)
Query: 113 IATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN 172
+ ++ ++L+GL Y+H IHRD+K N+ ++ +K+ DFG++ D
Sbjct: 123 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE------MA 176
Query: 173 TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 231
FV T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 177 GFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 236
Query: 232 PPG------LDYERDRKFSKSFKQM-------------------IASCLVKDPSKRPSAK 266
PG + E R + +S QM + LV D KR +A
Sbjct: 237 TPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 296
Query: 267 KLLKHSFFKQ 276
+ L H++F Q
Sbjct: 297 QALAHAYFAQ 306
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 81/190 (42%), Gaps = 32/190 (16%)
Query: 113 IATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN 172
+ ++ ++L+GL Y+H IHRD+K N+ ++ +K+ DFG++ D
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE------MT 180
Query: 173 TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 231
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
Query: 232 PPG------LDYERDRKFSKSFKQM-------------------IASCLVKDPSKRPSAK 266
PG + E R + +S QM + LV D KR +A
Sbjct: 241 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 267 KLLKHSFFKQ 276
+ L H++F Q
Sbjct: 301 QALAHAYFAQ 310
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 81/190 (42%), Gaps = 32/190 (16%)
Query: 113 IATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN 172
+ ++ ++L+GL Y+H IHRD+K N+ ++ +K+ DFG++ D
Sbjct: 132 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE------MT 185
Query: 173 TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 231
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 186 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 245
Query: 232 PPG------LDYERDRKFSKSFKQM-------------------IASCLVKDPSKRPSAK 266
PG + E R + +S QM + LV D KR +A
Sbjct: 246 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 305
Query: 267 KLLKHSFFKQ 276
+ L H++F Q
Sbjct: 306 QALAHAYFAQ 315
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 119/269 (44%), Gaps = 28/269 (10%)
Query: 22 GVSASVHRALCIPFNEIVA--VKILDFERDNSDLSN--ISREAQTMILVDHPNV--LKSH 75
G +V++ L IP E V V I + S +N I EA M VD+P+V L
Sbjct: 26 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 85
Query: 76 CSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHR 135
C + + +MPF CL + D + ++ KG++YL +HR
Sbjct: 86 CLTSTVQLITQLMPF----GCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHR 141
Query: 136 DVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVG-TPC-WMAPEVMEQLHG-Y 192
D+ + N+L+ +K+ DFG++ L G ++ + G P WMA E + LH Y
Sbjct: 142 DLAARNVLVKTPQHVKITDFGLAKLL---GAEEKEYHAEGGKVPIKWMALESI--LHRIY 196
Query: 193 DFKADIWSFGITALEL-AHGHAPFSKYPPMKV--LLMTLQNAPPGLDYERDRKFSKSFKQ 249
++D+WS+G+T EL G P+ P ++ +L + P + +
Sbjct: 197 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLP------QPPICTIDVYM 250
Query: 250 MIASCLVKDPSKRPSAKKLLKHSFFKQAR 278
++ C + D RP ++L+ F K AR
Sbjct: 251 IMVKCWMIDADSRPKFRELII-EFSKMAR 278
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 119/269 (44%), Gaps = 28/269 (10%)
Query: 22 GVSASVHRALCIPFNEIVA--VKILDFERDNSDLSN--ISREAQTMILVDHPNV--LKSH 75
G +V++ L IP E V V I + S +N I EA M VD+P+V L
Sbjct: 33 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 92
Query: 76 CSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHR 135
C + + +MPF CL + D + ++ KG++YL +HR
Sbjct: 93 CLTSTVQLITQLMPF----GCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHR 148
Query: 136 DVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVG-TPC-WMAPEVMEQLHG-Y 192
D+ + N+L+ +K+ DFG++ L G ++ + G P WMA E + LH Y
Sbjct: 149 DLAARNVLVKTPQHVKITDFGLAKLL---GAEEKEYHAEGGKVPIKWMALESI--LHRIY 203
Query: 193 DFKADIWSFGITALEL-AHGHAPFSKYPPMKV--LLMTLQNAPPGLDYERDRKFSKSFKQ 249
++D+WS+G+T EL G P+ P ++ +L + P + +
Sbjct: 204 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLP------QPPICTIDVYM 257
Query: 250 MIASCLVKDPSKRPSAKKLLKHSFFKQAR 278
++ C + D RP ++L+ F K AR
Sbjct: 258 IMVKCWMIDADSRPKFRELIIE-FSKMAR 285
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 81/190 (42%), Gaps = 32/190 (16%)
Query: 113 IATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN 172
+ ++ ++L+GL Y+H IHRD+K N+ ++ +K+ DFG++ D
Sbjct: 146 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE------MT 199
Query: 173 TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 231
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 200 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 259
Query: 232 PPG------LDYERDRKFSKSFKQM-------------------IASCLVKDPSKRPSAK 266
PG + E R + +S QM + LV D KR +A
Sbjct: 260 TPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 319
Query: 267 KLLKHSFFKQ 276
+ L H++F Q
Sbjct: 320 QALAHAYFAQ 329
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 81/190 (42%), Gaps = 32/190 (16%)
Query: 113 IATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN 172
+ ++ ++L+GL Y+H IHRD+K N+ ++ +K+ DFG++ D
Sbjct: 124 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE------MT 177
Query: 173 TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 231
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 178 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 237
Query: 232 PPG------LDYERDRKFSKSFKQM-------------------IASCLVKDPSKRPSAK 266
PG + E R + +S QM + LV D KR +A
Sbjct: 238 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 297
Query: 267 KLLKHSFFKQ 276
+ L H++F Q
Sbjct: 298 QALAHAYFAQ 307
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 81/190 (42%), Gaps = 32/190 (16%)
Query: 113 IATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN 172
+ ++ ++L+GL Y+H IHRD+K N+ ++ +K+ DFG++ D
Sbjct: 147 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE------MT 200
Query: 173 TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 231
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 201 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 260
Query: 232 PPG------LDYERDRKFSKSFKQM-------------------IASCLVKDPSKRPSAK 266
PG + E R + +S QM + LV D KR +A
Sbjct: 261 TPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 320
Query: 267 KLLKHSFFKQ 276
+ L H++F Q
Sbjct: 321 QALAHAYFAQ 330
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 91/191 (47%), Gaps = 6/191 (3%)
Query: 40 AVKILDFERDNSDLSNISREAQTMILVDHPNVLKS-HCSFVSDHNLWVVMPFMSGGSCLH 98
AVK L+ D ++S E M HPNVL S+ + VV+P+M G +
Sbjct: 67 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 126
Query: 99 ILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVS 158
++ + + +I L +V KG+ +L +HRD+ + N ++D + +K+ DFG++
Sbjct: 127 FIRNETHNPTVKDLIGFGL-QVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLA 185
Query: 159 ACLFDSGDRQRMRNTFVGTPC-WMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSK 217
++D T P WMA E + Q + K+D+WSFG+ EL AP
Sbjct: 186 RDMYDKEFDSVHNKTGAKLPVKWMALESL-QTQKFTTKSDVWSFGVLLWELMTRGAP--P 242
Query: 218 YPPMKVLLMTL 228
YP + +T+
Sbjct: 243 YPDVNTFDITV 253
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 81/190 (42%), Gaps = 32/190 (16%)
Query: 113 IATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN 172
+ ++ ++L+GL Y+H IHRD+K N+ ++ +K+ DFG++ D
Sbjct: 133 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE------MT 186
Query: 173 TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 231
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 187 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 246
Query: 232 PPG------LDYERDRKFSKSFKQM-------------------IASCLVKDPSKRPSAK 266
PG + E R + +S QM + LV D KR +A
Sbjct: 247 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 306
Query: 267 KLLKHSFFKQ 276
+ L H++F Q
Sbjct: 307 QALAHAYFAQ 316
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 81/190 (42%), Gaps = 32/190 (16%)
Query: 113 IATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN 172
+ ++ ++L+GL Y+H IHRD+K N+ ++ +K+ DFG++ D
Sbjct: 124 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE------MT 177
Query: 173 TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 231
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 178 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 237
Query: 232 PPG------LDYERDRKFSKSFKQM-------------------IASCLVKDPSKRPSAK 266
PG + E R + +S QM + LV D KR +A
Sbjct: 238 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 297
Query: 267 KLLKHSFFKQ 276
+ L H++F Q
Sbjct: 298 QALAHAYFAQ 307
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 81/190 (42%), Gaps = 32/190 (16%)
Query: 113 IATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN 172
+ ++ ++L+GL Y+H IHRD+K N+ ++ +K+ DFG++ D
Sbjct: 123 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE------MT 176
Query: 173 TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 231
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 177 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 236
Query: 232 PPG------LDYERDRKFSKSFKQM-------------------IASCLVKDPSKRPSAK 266
PG + E R + +S QM + LV D KR +A
Sbjct: 237 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 296
Query: 267 KLLKHSFFKQ 276
+ L H++F Q
Sbjct: 297 QALAHAYFAQ 306
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 81/190 (42%), Gaps = 32/190 (16%)
Query: 113 IATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN 172
+ ++ ++L+GL Y+H IHRD+K N+ ++ +K+ DFG++ D
Sbjct: 133 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE------MT 186
Query: 173 TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 231
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 187 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 246
Query: 232 PPG------LDYERDRKFSKSFKQM-------------------IASCLVKDPSKRPSAK 266
PG + E R + +S QM + LV D KR +A
Sbjct: 247 TPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 306
Query: 267 KLLKHSFFKQ 276
+ L H++F Q
Sbjct: 307 QALAHAYFAQ 316
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 91/203 (44%), Gaps = 17/203 (8%)
Query: 84 LWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNIL 143
L +VM + GG ++ F E + I++ + + + YLH HRDVK N+L
Sbjct: 88 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 147
Query: 144 IDVR---GAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFKADIWS 200
+ +KL DFG + ++ + TP ++APEV+ YD D+WS
Sbjct: 148 YTSKRPNAILKLTDFGFAK---ETTSHNSLTEP-CYTPYYVAPEVLGP-EKYDKSCDMWS 202
Query: 201 FGITALELAHGHAPF------SKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASC 254
G+ L G+ PF + P MK + Q P ++ + S+ K +I +
Sbjct: 203 LGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWS---EVSEEVKMLIRNL 259
Query: 255 LVKDPSKRPSAKKLLKHSFFKQA 277
L +P++R + + + H + Q+
Sbjct: 260 LKTEPTQRMTITEFMNHPWIMQS 282
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 85/181 (46%), Gaps = 26/181 (14%)
Query: 109 EEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQ 168
E V I ++ + +++LH G +HRD+K NI + +K+GDFG+ + + Q
Sbjct: 162 EHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQ 221
Query: 169 RMRNTF---------VGTPCWMAPEVMEQLHG--YDFKADIWSFGITALELAHGHAPFSK 217
+ VGT +M+P EQ+HG Y K DI+S G+ EL + FS
Sbjct: 222 TVLTPMPAYATHXGQVGTKLYMSP---EQIHGNNYSHKVDIFSLGLILFELLYS---FST 275
Query: 218 YPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQ---MIASCLVKDPSKRPSAKKLLKHSFF 274
++ ++N L F++ + Q M+ L P++RP A +++++ F
Sbjct: 276 QMERVRIITDVRNLKFPL------LFTQKYPQEHMMVQDMLSPSPTERPEATDIIENAIF 329
Query: 275 K 275
+
Sbjct: 330 E 330
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 81/190 (42%), Gaps = 32/190 (16%)
Query: 113 IATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN 172
+ ++ ++L+GL Y+H IHRD+K N+ ++ +K+ DFG++ D
Sbjct: 125 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE------MT 178
Query: 173 TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 231
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 179 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 238
Query: 232 PPG------LDYERDRKFSKSFKQM-------------------IASCLVKDPSKRPSAK 266
PG + E R + +S QM + LV D KR +A
Sbjct: 239 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 298
Query: 267 KLLKHSFFKQ 276
+ L H++F Q
Sbjct: 299 QALAHAYFAQ 308
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 81/190 (42%), Gaps = 32/190 (16%)
Query: 113 IATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN 172
+ ++ ++L+GL Y+H IHRD+K N+ ++ +K+ DFG++ D
Sbjct: 123 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE------MT 176
Query: 173 TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 231
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 177 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 236
Query: 232 PPG------LDYERDRKFSKSFKQM-------------------IASCLVKDPSKRPSAK 266
PG + E R + +S QM + LV D KR +A
Sbjct: 237 TPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 296
Query: 267 KLLKHSFFKQ 276
+ L H++F Q
Sbjct: 297 QALAHAYFAQ 306
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 104/240 (43%), Gaps = 43/240 (17%)
Query: 67 DHPNVLKSHCSFVSDHNLWVVMPFMS------------GGSCLHILKAAYPDGFEEVVIA 114
DHPNV++ +CS +D L++ + + L + K P
Sbjct: 85 DHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNP--------I 136
Query: 115 TILREVLKGLDYLHHHGHIHRDVKSGNILIDVR---------GA----IKLGDFGVSACL 161
++LR++ G+ +LH IHRD+K NIL+ GA I + DFG+ L
Sbjct: 137 SLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL 196
Query: 162 FDSGD---RQRMRNTFVGTPCWMAPEVMEQLHGYDF--KADIWSFG-ITALELAHGHAPF 215
DSG R + N GT W APE++E+ DI+S G + L+ G PF
Sbjct: 197 -DSGQXXFRXNLNNP-SGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPF 254
Query: 216 S-KYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSFF 274
KY ++ + + + DR +I+ + DP KRP+A K+L+H F
Sbjct: 255 GDKYSRESNIIRGIFSLDE-MKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 313
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%)
Query: 113 IATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN 172
I L ++L+GL Y+H +HRD+K N+L++ +K+ DFG++ D
Sbjct: 128 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLT 187
Query: 173 TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALEL 208
+V T + APE+M GY DIWS G E+
Sbjct: 188 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 223
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%)
Query: 113 IATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN 172
I L ++L+GL Y+H +HRD+K N+L++ +K+ DFG++ D
Sbjct: 126 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLT 185
Query: 173 TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALEL 208
+V T + APE+M GY DIWS G E+
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 221
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 75/153 (49%), Gaps = 4/153 (2%)
Query: 119 EVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTP 178
+V KG+++L IHRD+ + NIL+ + +K+ DFG++ + D R + +
Sbjct: 156 QVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLK 215
Query: 179 CWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYE 238
WMAPE + Y ++D+WSFG+ E+ A S YP +K+ + G
Sbjct: 216 -WMAPETIFD-RVYTIQSDVWSFGVLLWEIFSLGA--SPYPGVKIDEEFCRRLKEGTRMR 271
Query: 239 RDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKH 271
+ Q + C +PS+RP+ +L++H
Sbjct: 272 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 110/282 (39%), Gaps = 31/282 (10%)
Query: 1 MDKKKYPIGAEHYTLYEEVGQGVSASVHRALCI-----PFNEIVAVKILDFERDNSDLSN 55
M +Y I E L +G+G V+ + N V D DN +
Sbjct: 2 MGGPQYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKE--K 59
Query: 56 ISREAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIAT 115
EA M +DHP+++K + + W++M G H L+ + + + +
Sbjct: 60 FMSEAVIMKNLDHPHIVKL-IGIIEEEPTWIIMELYPYGELGHYLERN-KNSLKVLTLVL 117
Query: 116 ILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFV 175
++ K + YL +HRD+ NIL+ +KLGDFG+S + D + +
Sbjct: 118 YSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYI---EDEDYYKASVT 174
Query: 176 GTPC-WMAPEVMEQLHGYDFKADIWSFGITALE-LAHGHAPFSKYPPMKVLLMTLQNAPP 233
P WM+PE + + +D+W F + E L+ G PF L+N
Sbjct: 175 RLPIKWMSPESI-NFRRFTTASDVWMFAVCMWEILSFGKQPF----------FWLENKDV 223
Query: 234 GLDYERDRKFSKS------FKQMIASCLVKDPSKRPSAKKLL 269
E+ + K ++ C DPS RP +L+
Sbjct: 224 IGVLEKGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELV 265
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 104/240 (43%), Gaps = 43/240 (17%)
Query: 67 DHPNVLKSHCSFVSDHNLWVVMPFMS------------GGSCLHILKAAYPDGFEEVVIA 114
DHPNV++ +CS +D L++ + + L + K P
Sbjct: 85 DHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNP--------I 136
Query: 115 TILREVLKGLDYLHHHGHIHRDVKSGNILIDVR---------GA----IKLGDFGVSACL 161
++LR++ G+ +LH IHRD+K NIL+ GA I + DFG+ L
Sbjct: 137 SLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL 196
Query: 162 FDSGD---RQRMRNTFVGTPCWMAPEVMEQLHGYDF--KADIWSFG-ITALELAHGHAPF 215
DSG R + N GT W APE++E+ DI+S G + L+ G PF
Sbjct: 197 -DSGQXXFRXNLNNP-SGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPF 254
Query: 216 S-KYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSFF 274
KY ++ + + + DR +I+ + DP KRP+A K+L+H F
Sbjct: 255 GDKYSRESNIIRGIFSLDE-MKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 313
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 75/153 (49%), Gaps = 4/153 (2%)
Query: 119 EVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTP 178
+V KG+++L IHRD+ + NIL+ + +K+ DFG++ + D R + +
Sbjct: 156 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLK 215
Query: 179 CWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYE 238
WMAPE + Y ++D+WSFG+ E+ A S YP +K+ + G
Sbjct: 216 -WMAPETIFD-RVYTIQSDVWSFGVLLWEIFSLGA--SPYPGVKIDEEFCRRLKEGTRMR 271
Query: 239 RDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKH 271
+ Q + C +PS+RP+ +L++H
Sbjct: 272 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 75/153 (49%), Gaps = 4/153 (2%)
Query: 119 EVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTP 178
+V KG+++L IHRD+ + NIL+ + +K+ DFG++ + D R + +
Sbjct: 156 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLK 215
Query: 179 CWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYE 238
WMAPE + Y ++D+WSFG+ E+ A S YP +K+ + G
Sbjct: 216 -WMAPETIFD-RVYTIQSDVWSFGVLLWEIFSLGA--SPYPGVKIDEEFCRRLKEGTRMR 271
Query: 239 RDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKH 271
+ Q + C +PS+RP+ +L++H
Sbjct: 272 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 81/190 (42%), Gaps = 32/190 (16%)
Query: 113 IATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN 172
+ ++ ++L+GL Y+H IHRD+K N+ ++ +K+ D+G++ D
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDE------MT 180
Query: 173 TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 231
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
Query: 232 PPG------LDYERDRKFSKSFKQM-------------------IASCLVKDPSKRPSAK 266
PG + E R + +S QM + LV D KR +A
Sbjct: 241 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 267 KLLKHSFFKQ 276
+ L H++F Q
Sbjct: 301 QALAHAYFAQ 310
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%)
Query: 113 IATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN 172
I L ++L+GL Y+H +HRD+K N+L++ +K+ DFG++ D
Sbjct: 126 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLT 185
Query: 173 TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALEL 208
+V T + APE+M GY DIWS G E+
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 221
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 90/191 (47%), Gaps = 6/191 (3%)
Query: 40 AVKILDFERDNSDLSNISREAQTMILVDHPNVLKS-HCSFVSDHNLWVVMPFMSGGSCLH 98
AVK L+ D ++S E M HPNVL S+ + VV+P+M G +
Sbjct: 63 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 122
Query: 99 ILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVS 158
++ + + +I L +V KG+ +L +HRD+ + N ++D + +K+ DFG++
Sbjct: 123 FIRNETHNPTVKDLIGFGL-QVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLA 181
Query: 159 ACLFDSGDRQRMRNTFVGTPC-WMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSK 217
+ D T P WMA E + Q + K+D+WSFG+ EL AP
Sbjct: 182 RDMLDKEFDSVHNKTGAKLPVKWMALESL-QTQKFTTKSDVWSFGVLLWELMTRGAP--P 238
Query: 218 YPPMKVLLMTL 228
YP + +T+
Sbjct: 239 YPDVNTFDITV 249
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%)
Query: 113 IATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN 172
I L ++L+GL Y+H +HRD+K N+L++ +K+ DFG++ D
Sbjct: 126 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLT 185
Query: 173 TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALEL 208
+V T + APE+M GY DIWS G E+
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 221
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%)
Query: 113 IATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN 172
I L ++L+GL Y+H +HRD+K N+L++ +K+ DFG++ D
Sbjct: 130 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLT 189
Query: 173 TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALEL 208
+V T + APE+M GY DIWS G E+
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 225
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 109/278 (39%), Gaps = 31/278 (11%)
Query: 5 KYPIGAEHYTLYEEVGQGVSASVHRALCI-----PFNEIVAVKILDFERDNSDLSNISRE 59
+Y I E L +G+G V+ + N V D DN + E
Sbjct: 2 QYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKE--KFMSE 59
Query: 60 AQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILRE 119
A M +DHP+++K + + W++M G H L+ + + + + +
Sbjct: 60 AVIMKNLDHPHIVKL-IGIIEEEPTWIIMELYPYGELGHYLERN-KNSLKVLTLVLYSLQ 117
Query: 120 VLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPC 179
+ K + YL +HRD+ NIL+ +KLGDFG+S + D + + P
Sbjct: 118 ICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYI---EDEDYYKASVTRLPI 174
Query: 180 -WMAPEVMEQLHGYDFKADIWSFGITALE-LAHGHAPFSKYPPMKVLLMTLQNAPPGLDY 237
WM+PE + + +D+W F + E L+ G PF L+N
Sbjct: 175 KWMSPESI-NFRRFTTASDVWMFAVCMWEILSFGKQPF----------FWLENKDVIGVL 223
Query: 238 ERDRKFSKS------FKQMIASCLVKDPSKRPSAKKLL 269
E+ + K ++ C DPS RP +L+
Sbjct: 224 EKGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELV 261
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 100/218 (45%), Gaps = 11/218 (5%)
Query: 4 KKYPIGAEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTM 63
++ + +++++ +G+G V++ + +VAVK L ER E + +
Sbjct: 31 RELQVASDNFSNKNILGRGGFGKVYKGR-LADGTLVAVKRLKEERXQGGELQFQTEVEMI 89
Query: 64 ILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVL-- 121
+ H N+L+ ++ +V P+M+ GS L+ P+ + R L
Sbjct: 90 SMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRER-PESQPPLDWPKRQRIALGS 148
Query: 122 -KGLDYLHHHGH---IHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGT 177
+GL YLH H IHRDVK+ NIL+D +GDFG+ A L D D + GT
Sbjct: 149 ARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGL-AKLMDYKDXH-VXXAVRGT 206
Query: 178 PCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPF 215
+APE + + K D++ +G+ LEL G F
Sbjct: 207 IGHIAPEYLSTGKSSE-KTDVFGYGVMLLELITGQRAF 243
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 109/278 (39%), Gaps = 31/278 (11%)
Query: 5 KYPIGAEHYTLYEEVGQGVSASVHRALCI-----PFNEIVAVKILDFERDNSDLSNISRE 59
+Y I E L +G+G V+ + N V D DN + E
Sbjct: 18 QYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKE--KFMSE 75
Query: 60 AQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILRE 119
A M +DHP+++K + + W++M G H L+ + + + + +
Sbjct: 76 AVIMKNLDHPHIVKL-IGIIEEEPTWIIMELYPYGELGHYLERN-KNSLKVLTLVLYSLQ 133
Query: 120 VLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPC 179
+ K + YL +HRD+ NIL+ +KLGDFG+S + D + + P
Sbjct: 134 ICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYI---EDEDYYKASVTRLPI 190
Query: 180 -WMAPEVMEQLHGYDFKADIWSFGITALE-LAHGHAPFSKYPPMKVLLMTLQNAPPGLDY 237
WM+PE + + +D+W F + E L+ G PF L+N
Sbjct: 191 KWMSPESI-NFRRFTTASDVWMFAVCMWEILSFGKQPF----------FWLENKDVIGVL 239
Query: 238 ERDRKFSKS------FKQMIASCLVKDPSKRPSAKKLL 269
E+ + K ++ C DPS RP +L+
Sbjct: 240 EKGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELV 277
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%)
Query: 113 IATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN 172
I L ++L+GL Y+H +HRD+K N+L++ +K+ DFG++ D
Sbjct: 130 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLT 189
Query: 173 TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALEL 208
+V T + APE+M GY DIWS G E+
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 225
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%)
Query: 113 IATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN 172
I L ++L+GL Y+H +HRD+K N+L++ +K+ DFG++ D
Sbjct: 130 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 189
Query: 173 TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALEL 208
+V T + APE+M GY DIWS G E+
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 225
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 50/103 (48%)
Query: 113 IATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN 172
I L ++L+GL Y+H +HRD+K N+L++ +K+ DFG++ D
Sbjct: 126 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 185
Query: 173 TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPF 215
+V T + APE+M GY DIWS G E+ F
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 75/153 (49%), Gaps = 4/153 (2%)
Query: 119 EVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTP 178
+V KG+++L IHRD+ + NIL+ + +K+ DFG++ + D R + +
Sbjct: 147 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLK 206
Query: 179 CWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYE 238
WMAPE + Y ++D+WSFG+ E+ A S YP +K+ + G
Sbjct: 207 -WMAPETIFD-RVYTIQSDVWSFGVLLWEIFSLGA--SPYPGVKIDEEFCRRLKEGTRMR 262
Query: 239 RDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKH 271
+ Q + C +PS+RP+ +L++H
Sbjct: 263 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%)
Query: 113 IATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN 172
I L ++L+GL Y+H +HRD+K N+L++ +K+ DFG++ D
Sbjct: 128 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 187
Query: 173 TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALEL 208
+V T + APE+M GY DIWS G E+
Sbjct: 188 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 223
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%)
Query: 113 IATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN 172
I L ++L+GL Y+H +HRD+K N+L++ +K+ DFG++ D
Sbjct: 128 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 187
Query: 173 TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALEL 208
+V T + APE+M GY DIWS G E+
Sbjct: 188 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 223
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%)
Query: 113 IATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN 172
I L ++L+GL Y+H +HRD+K N+L++ +K+ DFG++ D
Sbjct: 131 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 190
Query: 173 TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALEL 208
+V T + APE+M GY DIWS G E+
Sbjct: 191 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 226
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%)
Query: 113 IATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN 172
I L ++L+GL Y+H +HRD+K N+L++ +K+ DFG++ D
Sbjct: 132 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 191
Query: 173 TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALEL 208
+V T + APE+M GY DIWS G E+
Sbjct: 192 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 227
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%)
Query: 113 IATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN 172
I L ++L+GL Y+H +HRD+K N+L++ +K+ DFG++ D
Sbjct: 123 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 182
Query: 173 TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALEL 208
+V T + APE+M GY DIWS G E+
Sbjct: 183 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 218
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 75/153 (49%), Gaps = 4/153 (2%)
Query: 119 EVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTP 178
+V KG+++L IHRD+ + NIL+ + +K+ DFG++ + D R + +
Sbjct: 147 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLK 206
Query: 179 CWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYE 238
WMAPE + Y ++D+WSFG+ E+ A S YP +K+ + G
Sbjct: 207 -WMAPETIFD-RVYTIQSDVWSFGVLLWEIFSLGA--SPYPGVKIDEEFCRRLKEGTRMR 262
Query: 239 RDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKH 271
+ Q + C +PS+RP+ +L++H
Sbjct: 263 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%)
Query: 113 IATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN 172
I L ++L+GL Y+H +HRD+K N+L++ +K+ DFG++ D
Sbjct: 130 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 189
Query: 173 TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALEL 208
+V T + APE+M GY DIWS G E+
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 225
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 50/103 (48%)
Query: 113 IATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN 172
I L ++L+GL Y+H +HRD+K N+L++ +K+ DFG++ D
Sbjct: 124 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 183
Query: 173 TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPF 215
+V T + APE+M GY DIWS G E+ F
Sbjct: 184 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 226
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 125/302 (41%), Gaps = 54/302 (17%)
Query: 10 AEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHP 69
A TL E VG+G V R E VAVKI + S E +++ H
Sbjct: 36 ARQITLLECVGKGRYGEVWRGSWQ--GENVAVKIFSSRDEKSWFRET--ELYNTVMLRHE 91
Query: 70 NVLKSHCS-FVSDHN---LWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLD 125
N+L S S H+ LW++ + GS L+ D V I+ + GL
Sbjct: 92 NILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLD---TVSCLRIVLSIASGLA 148
Query: 126 YLHHH--------GHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNT-FVG 176
+LH HRD+KS NIL+ G + D G++ S ++ + N VG
Sbjct: 149 HLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVG 208
Query: 177 TPCWMAPEVME---QLHGYDF--KADIWSFGITALELAHGHA----------PFSKYPP- 220
T +MAPEV++ Q+ +D + DIW+FG+ E+A PF P
Sbjct: 209 TKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPN 268
Query: 221 ------MKVLLMTLQNAP--PGLDYERDRKFS----KSFKQMIASCLVKDPSKRPSAKKL 268
M+ ++ Q P P +R FS S +++ C ++PS R +A ++
Sbjct: 269 DPSFEDMRKVVCVDQQRPNIP------NRWFSDPTLTSLAKLMKECWYQNPSARLTALRI 322
Query: 269 LK 270
K
Sbjct: 323 KK 324
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%)
Query: 113 IATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN 172
I L ++L+GL Y+H +HRD+K N+L++ +K+ DFG++ D
Sbjct: 124 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 183
Query: 173 TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALEL 208
+V T + APE+M GY DIWS G E+
Sbjct: 184 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 219
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%)
Query: 113 IATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN 172
I L ++L+GL Y+H +HRD+K N+L++ +K+ DFG++ D
Sbjct: 130 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 189
Query: 173 TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALEL 208
+V T + APE+M GY DIWS G E+
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 225
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%)
Query: 113 IATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN 172
I L ++L+GL Y+H +HRD+K N+L++ +K+ DFG++ D
Sbjct: 146 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLT 205
Query: 173 TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALEL 208
+V T + APE+M GY DIWS G E+
Sbjct: 206 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 241
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 50/103 (48%)
Query: 113 IATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN 172
I L ++L+GL Y+H +HRD+K N+L++ +K+ DFG++ D
Sbjct: 134 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 193
Query: 173 TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPF 215
+V T + APE+M GY DIWS G E+ F
Sbjct: 194 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 236
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 50/103 (48%)
Query: 113 IATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN 172
I L ++L+GL Y+H +HRD+K N+L++ +K+ DFG++ D
Sbjct: 126 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 185
Query: 173 TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPF 215
+V T + APE+M GY DIWS G E+ F
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 125/302 (41%), Gaps = 54/302 (17%)
Query: 10 AEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHP 69
A TL E VG+G V R E VAVKI + S E +++ H
Sbjct: 7 AHQITLLECVGKGRYGEVWRGSWQ--GENVAVKIFSSRDEKSWFRET--ELYNTVMLRHE 62
Query: 70 NVLKSHCS-FVSDHN---LWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLD 125
N+L S S H+ LW++ + GS L+ D V I+ + GL
Sbjct: 63 NILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLD---TVSCLRIVLSIASGLA 119
Query: 126 YLHHH--------GHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNT-FVG 176
+LH HRD+KS NIL+ G + D G++ S ++ + N VG
Sbjct: 120 HLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVG 179
Query: 177 TPCWMAPEVME---QLHGYDF--KADIWSFGITALELAHGHA----------PFSKYPP- 220
T +MAPEV++ Q+ +D + DIW+FG+ E+A PF P
Sbjct: 180 TKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPN 239
Query: 221 ------MKVLLMTLQNAP--PGLDYERDRKFS----KSFKQMIASCLVKDPSKRPSAKKL 268
M+ ++ Q P P +R FS S +++ C ++PS R +A ++
Sbjct: 240 DPSFEDMRKVVCVDQQRPNIP------NRWFSDPTLTSLAKLMKECWYQNPSARLTALRI 293
Query: 269 LK 270
K
Sbjct: 294 KK 295
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%)
Query: 113 IATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN 172
I L ++L+GL Y+H +HRD+K N+L++ +K+ DFG++ D
Sbjct: 146 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 205
Query: 173 TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALEL 208
+V T + APE+M GY DIWS G E+
Sbjct: 206 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 241
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 108/245 (44%), Gaps = 21/245 (8%)
Query: 39 VAVKILDFERDNSDLSNISREAQTMILVDHPNVLKSHCSFVSDHNL--WVVMPFMSGGSC 96
VAVK L D + EA + +H N+++ C VS +L ++++ M+GG
Sbjct: 104 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR--CIGVSLQSLPRFILLELMAGGDL 161
Query: 97 LHILKAAYPDGFEEVVIAT-----ILREVLKGLDYLHHHGHIHRDVKSGNILIDVRG--- 148
L+ P + +A + R++ G YL + IHRD+ + N L+ G
Sbjct: 162 KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGR 221
Query: 149 AIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPE-VMEQLHGYDFKADIWSFGITALE 207
K+GDFG++ ++ +G ++ + WM PE ME + + K D WSFG+ E
Sbjct: 222 VAKIGDFGMARDIYRAGYYRKGGCAMLPVK-WMPPEAFMEGI--FTSKTDTWSFGVLLWE 278
Query: 208 L-AHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAK 266
+ + G+ P+ P K L+ G + + +++ C P RP+
Sbjct: 279 IFSLGYMPY----PSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFA 334
Query: 267 KLLKH 271
+L+
Sbjct: 335 IILER 339
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 96/214 (44%), Gaps = 9/214 (4%)
Query: 8 IGAEHYTLYEEVGQGVSASVHRA-LCIPFNEIV--AVKIL--DFERDNSDLSNISREAQT 62
IG + L E++G G V R P + V AVK L D + + RE
Sbjct: 15 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 74
Query: 63 MILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLK 122
M +DH N+++ + V + +V GS L L+ + F ++ +V +
Sbjct: 75 MHSLDHRNLIRLY-GVVLTPPMKMVTELAPLGSLLDRLRK-HQGHFLLGTLSRYAVQVAE 132
Query: 123 GLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMA 182
G+ YL IHRD+ + N+L+ R +K+GDFG+ L + D M+ W A
Sbjct: 133 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCA 192
Query: 183 PEVMEQLHGYDFKADIWSFGITALEL-AHGHAPF 215
PE ++ + +D W FG+T E+ +G P+
Sbjct: 193 PESLKT-RTFSHASDTWMFGVTLWEMFTYGQEPW 225
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 110/263 (41%), Gaps = 12/263 (4%)
Query: 8 IGAEHYTLYEEVGQGVSASVHRA-LCIPFNEIV--AVKIL--DFERDNSDLSNISREAQT 62
IG + L E++G G V R P + V AVK L D + + RE
Sbjct: 9 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 68
Query: 63 MILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLK 122
M +DH N+++ + V + +V GS L L+ + F ++ +V +
Sbjct: 69 MHSLDHRNLIRLY-GVVLTPPMKMVTELAPLGSLLDRLRK-HQGHFLLGTLSRYAVQVAE 126
Query: 123 GLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMA 182
G+ YL IHRD+ + N+L+ R +K+GDFG+ L + D M+ W A
Sbjct: 127 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA 186
Query: 183 PEVMEQLHGYDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDR 241
PE ++ + +D W FG+T E+ +G P+ ++L + G R
Sbjct: 187 PESLKT-RTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKE---GERLPRPE 242
Query: 242 KFSKSFKQMIASCLVKDPSKRPS 264
+ ++ C P RP+
Sbjct: 243 DCPQDIYNVMVQCWAHKPEDRPT 265
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 108/245 (44%), Gaps = 21/245 (8%)
Query: 39 VAVKILDFERDNSDLSNISREAQTMILVDHPNVLKSHCSFVSDHNL--WVVMPFMSGGSC 96
VAVK L D + EA + +H N+++ C VS +L ++++ M+GG
Sbjct: 81 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR--CIGVSLQSLPRFILLELMAGGDL 138
Query: 97 LHILKAAYPDGFEEVVIAT-----ILREVLKGLDYLHHHGHIHRDVKSGNILIDVRG--- 148
L+ P + +A + R++ G YL + IHRD+ + N L+ G
Sbjct: 139 KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGR 198
Query: 149 AIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEV-MEQLHGYDFKADIWSFGITALE 207
K+GDFG++ ++ +G ++ + WM PE ME + + K D WSFG+ E
Sbjct: 199 VAKIGDFGMARDIYRAGYYRKGGCAMLPVK-WMPPEAFMEGI--FTSKTDTWSFGVLLWE 255
Query: 208 L-AHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAK 266
+ + G+ P+ P K L+ G + + +++ C P RP+
Sbjct: 256 IFSLGYMPY----PSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFA 311
Query: 267 KLLKH 271
+L+
Sbjct: 312 IILER 316
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 87/204 (42%), Gaps = 17/204 (8%)
Query: 19 VGQGVSASVHRALCIPFNEIVAVKILDFERDN-SDLSNISREAQTMILVDHPNVLKSHCS 77
+G G V A VA+K L N + RE M +V+H N++
Sbjct: 32 IGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV 91
Query: 78 FVSDHNL------WVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHG 131
F +L ++VM M L + ++ +L ++L G+ +LH G
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDAN-----LSQVIQMELDHERMSYLLYQMLVGIKHLHSAG 146
Query: 132 HIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHG 191
IHRD+K NI++ +K+ DFG++ + M +V T + APEV+ + G
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLAR----TAGTSFMMTPYVVTRYYRAPEVILGM-G 201
Query: 192 YDFKADIWSFGITALELAHGHAPF 215
Y DIWS G+ E+ G F
Sbjct: 202 YKENVDIWSVGVIMGEMIKGGVLF 225
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 96/214 (44%), Gaps = 9/214 (4%)
Query: 8 IGAEHYTLYEEVGQGVSASVHRA-LCIPFNEIV--AVKIL--DFERDNSDLSNISREAQT 62
IG + L E++G G V R P + V AVK L D + + RE
Sbjct: 5 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 64
Query: 63 MILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLK 122
M +DH N+++ + V + +V GS L L+ + F ++ +V +
Sbjct: 65 MHSLDHRNLIRLY-GVVLTPPMKMVTELAPLGSLLDRLRK-HQGHFLLGTLSRYAVQVAE 122
Query: 123 GLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMA 182
G+ YL IHRD+ + N+L+ R +K+GDFG+ L + D M+ W A
Sbjct: 123 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCA 182
Query: 183 PEVMEQLHGYDFKADIWSFGITALEL-AHGHAPF 215
PE ++ + +D W FG+T E+ +G P+
Sbjct: 183 PESLKT-RTFSHASDTWMFGVTLWEMFTYGQEPW 215
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 125/302 (41%), Gaps = 54/302 (17%)
Query: 10 AEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHP 69
A TL E VG+G V R E VAVKI + S E +++ H
Sbjct: 7 ARDITLLECVGKGRYGEVWRGSWQ--GENVAVKIFSSRDEKSWFRET--ELYNTVMLRHE 62
Query: 70 NVLKSHCS-FVSDHN---LWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLD 125
N+L S S H+ LW++ + GS L+ D V I+ + GL
Sbjct: 63 NILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLD---TVSCLRIVLSIASGLA 119
Query: 126 YLHHH--------GHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNT-FVG 176
+LH HRD+KS NIL+ G + D G++ S ++ + N VG
Sbjct: 120 HLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVG 179
Query: 177 TPCWMAPEVME---QLHGYDF--KADIWSFGITALELAHGHA----------PFSKYPP- 220
T +MAPEV++ Q+ +D + DIW+FG+ E+A PF P
Sbjct: 180 TKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPN 239
Query: 221 ------MKVLLMTLQNAP--PGLDYERDRKFS----KSFKQMIASCLVKDPSKRPSAKKL 268
M+ ++ Q P P +R FS S +++ C ++PS R +A ++
Sbjct: 240 DPSFEDMRKVVCVDQQRPNIP------NRWFSDPTLTSLAKLMKECWYQNPSARLTALRI 293
Query: 269 LK 270
K
Sbjct: 294 KK 295
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 96/214 (44%), Gaps = 9/214 (4%)
Query: 8 IGAEHYTLYEEVGQGVSASVHRA-LCIPFNEIV--AVKIL--DFERDNSDLSNISREAQT 62
IG + L E++G G V R P + V AVK L D + + RE
Sbjct: 15 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 74
Query: 63 MILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLK 122
M +DH N+++ + V + +V GS L L+ + F ++ +V +
Sbjct: 75 MHSLDHRNLIRLY-GVVLTPPMKMVTELAPLGSLLDRLRK-HQGHFLLGTLSRYAVQVAE 132
Query: 123 GLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMA 182
G+ YL IHRD+ + N+L+ R +K+GDFG+ L + D M+ W A
Sbjct: 133 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA 192
Query: 183 PEVMEQLHGYDFKADIWSFGITALEL-AHGHAPF 215
PE ++ + +D W FG+T E+ +G P+
Sbjct: 193 PESLKT-RTFSHASDTWMFGVTLWEMFTYGQEPW 225
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 87/204 (42%), Gaps = 17/204 (8%)
Query: 19 VGQGVSASVHRALCIPFNEIVAVKILDFERDN-SDLSNISREAQTMILVDHPNVLKSHCS 77
+G G V A VA+K L N + RE M +V+H N++
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV 91
Query: 78 FVSDHNL------WVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHG 131
F +L ++VM M L + ++ +L ++L G+ +LH G
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDAN-----LSQVIQMELDHERMSYLLYQMLVGIKHLHSAG 146
Query: 132 HIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHG 191
IHRD+K NI++ +K+ DFG++ + M +V T + APEV+ + G
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLAR----TAGTSFMMTPYVVTRYYRAPEVILGM-G 201
Query: 192 YDFKADIWSFGITALELAHGHAPF 215
Y DIWS G+ E+ G F
Sbjct: 202 YKENVDIWSVGVIMGEMIKGGVLF 225
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 80/190 (42%), Gaps = 32/190 (16%)
Query: 113 IATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN 172
+ ++ ++L+GL Y+H IHRD+K N+ ++ +K+ DFG++ D
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE------MT 180
Query: 173 TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 231
V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 181 GXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
Query: 232 PPG------LDYERDRKFSKSFKQM-------------------IASCLVKDPSKRPSAK 266
PG + E R + +S QM + LV D KR +A
Sbjct: 241 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 267 KLLKHSFFKQ 276
+ L H++F Q
Sbjct: 301 QALAHAYFAQ 310
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 89/172 (51%), Gaps = 13/172 (7%)
Query: 106 DGF--EEVVIATILR---EVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSAC 160
DGF E + + ++ +V +G+++L IHRD+ + NIL+ +K+ DFG++
Sbjct: 189 DGFYKEPITMEDLISYSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARD 248
Query: 161 LFDSGDRQRMRNTFVGTPCWMAPE-VMEQLHGYDFKADIWSFGITALEL-AHGHAPFSKY 218
++ + D R +T + WMAPE + +++ Y K+D+WS+G+ E+ + G +P Y
Sbjct: 249 IYKNPDYVRKGDTRLPLK-WMAPESIFDKI--YSTKSDVWSYGVLLWEIFSLGGSP---Y 302
Query: 219 PPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLK 270
P +++ G+ + Q++ C +DP +RP +L++
Sbjct: 303 PGVQMDEDFCSRLREGMRMRAPEYSTPEIYQIMLDCWHRDPKERPRFAELVE 354
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 96/214 (44%), Gaps = 9/214 (4%)
Query: 8 IGAEHYTLYEEVGQGVSASVHRA-LCIPFNEIV--AVKIL--DFERDNSDLSNISREAQT 62
IG + L E++G G V R P + V AVK L D + + RE
Sbjct: 5 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 64
Query: 63 MILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLK 122
M +DH N+++ + V + +V GS L L+ + F ++ +V +
Sbjct: 65 MHSLDHRNLIRLY-GVVLTPPMKMVTELAPLGSLLDRLRK-HQGHFLLGTLSRYAVQVAE 122
Query: 123 GLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMA 182
G+ YL IHRD+ + N+L+ R +K+GDFG+ L + D M+ W A
Sbjct: 123 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA 182
Query: 183 PEVMEQLHGYDFKADIWSFGITALEL-AHGHAPF 215
PE ++ + +D W FG+T E+ +G P+
Sbjct: 183 PESLKT-RTFSHASDTWMFGVTLWEMFTYGQEPW 215
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 89/212 (41%), Gaps = 17/212 (8%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDN-SDLSNISREAQTMILVDHP 69
+ Y + +G G V A VA+K L N + RE M V+H
Sbjct: 26 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 85
Query: 70 NVLKSHCSFVSDHNL------WVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKG 123
N++ F +L ++VM M C I + ++ +L ++L G
Sbjct: 86 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-----LDHERMSYLLYQMLCG 140
Query: 124 LDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAP 183
+ +LH G IHRD+K NI++ +K+ DFG++ + M FV T + AP
Sbjct: 141 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----TAGTSFMMVPFVVTRYYRAP 196
Query: 184 EVMEQLHGYDFKADIWSFGITALELAHGHAPF 215
EV+ + GY DIWS G E+ G F
Sbjct: 197 EVILGM-GYKENVDIWSVGCIMGEMIKGGVLF 227
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 96/214 (44%), Gaps = 9/214 (4%)
Query: 8 IGAEHYTLYEEVGQGVSASVHRA-LCIPFNEIV--AVKIL--DFERDNSDLSNISREAQT 62
IG + L E++G G V R P + V AVK L D + + RE
Sbjct: 9 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 68
Query: 63 MILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLK 122
M +DH N+++ + V + +V GS L L+ + F ++ +V +
Sbjct: 69 MHSLDHRNLIRLY-GVVLTPPMKMVTELAPLGSLLDRLRK-HQGHFLLGTLSRYAVQVAE 126
Query: 123 GLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMA 182
G+ YL IHRD+ + N+L+ R +K+GDFG+ L + D M+ W A
Sbjct: 127 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA 186
Query: 183 PEVMEQLHGYDFKADIWSFGITALEL-AHGHAPF 215
PE ++ + +D W FG+T E+ +G P+
Sbjct: 187 PESLKT-RTFSHASDTWMFGVTLWEMFTYGQEPW 219
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 96/214 (44%), Gaps = 9/214 (4%)
Query: 8 IGAEHYTLYEEVGQGVSASVHRA-LCIPFNEIV--AVKIL--DFERDNSDLSNISREAQT 62
IG + L E++G G V R P + V AVK L D + + RE
Sbjct: 5 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 64
Query: 63 MILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLK 122
M +DH N+++ + V + +V GS L L+ + F ++ +V +
Sbjct: 65 MHSLDHRNLIRLY-GVVLTPPMKMVTELAPLGSLLDRLRK-HQGHFLLGTLSRYAVQVAE 122
Query: 123 GLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMA 182
G+ YL IHRD+ + N+L+ R +K+GDFG+ L + D M+ W A
Sbjct: 123 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA 182
Query: 183 PEVMEQLHGYDFKADIWSFGITALEL-AHGHAPF 215
PE ++ + +D W FG+T E+ +G P+
Sbjct: 183 PESLKT-RTFSHASDTWMFGVTLWEMFTYGQEPW 215
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 80/190 (42%), Gaps = 32/190 (16%)
Query: 113 IATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN 172
+ ++ ++L+GL Y+H IHRD+K N+ ++ +K+ DFG++ D
Sbjct: 147 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE------MX 200
Query: 173 TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 231
V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 201 GXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 260
Query: 232 PPG------LDYERDRKFSKSFKQM-------------------IASCLVKDPSKRPSAK 266
PG + E R + +S QM + LV D KR +A
Sbjct: 261 TPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 320
Query: 267 KLLKHSFFKQ 276
+ L H++F Q
Sbjct: 321 QALAHAYFAQ 330
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 100/229 (43%), Gaps = 36/229 (15%)
Query: 18 EVGQGVSASVHRALC---IPFN--EIVAVKILDFERDNSDLSNISREAQTMILVDHPNVL 72
++G+G V +A +P+ +VAVK+L E ++ REA M D+PN++
Sbjct: 54 DIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIV 113
Query: 73 KSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGF------------------------ 108
K + ++ +M+ G L++ P
Sbjct: 114 KLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSC 173
Query: 109 -EEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDR 167
E++ IA R+V G+ YL +HRD+ + N L+ +K+ DFG+S ++ S D
Sbjct: 174 AEQLCIA---RQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIY-SADY 229
Query: 168 QRMRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALEL-AHGHAPF 215
+ WM PE + + Y ++D+W++G+ E+ ++G P+
Sbjct: 230 YKADGNDAIPIRWMPPESI-FYNRYTTESDVWAYGVVLWEIFSYGLQPY 277
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 80/190 (42%), Gaps = 32/190 (16%)
Query: 113 IATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN 172
+ ++ ++L+GL Y+H IHRD+K N+ ++ +K+ FG++ D
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDE------MT 180
Query: 173 TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 231
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
Query: 232 PPG------LDYERDRKFSKSFKQM-------------------IASCLVKDPSKRPSAK 266
PG + E R + +S QM + LV D KR +A
Sbjct: 241 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 267 KLLKHSFFKQ 276
+ L H++F Q
Sbjct: 301 QALAHAYFAQ 310
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 86/204 (42%), Gaps = 17/204 (8%)
Query: 19 VGQGVSASVHRALCIPFNEIVAVKILDFERDN-SDLSNISREAQTMILVDHPNVLKSHCS 77
+G G V A VA+K L N + RE M V+H N++
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 78 FVSDHNL------WVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHG 131
F +L ++VM M C I + ++ +L ++L G+ +LH G
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDANLCQVIQME-----LDHERMSYLLYQMLCGIKHLHSAG 146
Query: 132 HIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHG 191
IHRD+K NI++ +K+ DFG++ + M +V T + APEV+ + G
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLAR----TAGTSFMMTPYVVTRYYRAPEVILGM-G 201
Query: 192 YDFKADIWSFGITALELAHGHAPF 215
Y DIWS G E+ G F
Sbjct: 202 YKENVDIWSVGCIMGEMIKGGVLF 225
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 86/204 (42%), Gaps = 17/204 (8%)
Query: 19 VGQGVSASVHRALCIPFNEIVAVKILDFERDN-SDLSNISREAQTMILVDHPNVLKSHCS 77
+G G V A VA+K L N + RE M V+H N++
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 78 FVSDHNL------WVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHG 131
F +L ++VM M C I + ++ +L ++L G+ +LH G
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDANLCQVIQME-----LDHERMSYLLYQMLCGIKHLHSAG 146
Query: 132 HIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHG 191
IHRD+K NI++ +K+ DFG++ + M +V T + APEV+ + G
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLAR----TAGTSFMMTPYVVTRYYRAPEVILGM-G 201
Query: 192 YDFKADIWSFGITALELAHGHAPF 215
Y DIWS G E+ G F
Sbjct: 202 YKENVDIWSVGCIMGEMIKGGVLF 225
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 86/204 (42%), Gaps = 17/204 (8%)
Query: 19 VGQGVSASVHRALCIPFNEIVAVKILDFERDN-SDLSNISREAQTMILVDHPNVLKSHCS 77
+G G V A VA+K L N + RE M V+H N++
Sbjct: 33 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 92
Query: 78 FVSDHNL------WVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHG 131
F +L ++VM M C I + ++ +L ++L G+ +LH G
Sbjct: 93 FTPQKSLEEFQDVYIVMELMDANLCQVIQME-----LDHERMSYLLYQMLCGIKHLHSAG 147
Query: 132 HIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHG 191
IHRD+K NI++ +K+ DFG++ + M +V T + APEV+ + G
Sbjct: 148 IIHRDLKPSNIVVKSDCTLKILDFGLAR----TAGTSFMMTPYVVTRYYRAPEVILGM-G 202
Query: 192 YDFKADIWSFGITALELAHGHAPF 215
Y DIWS G E+ G F
Sbjct: 203 YKENVDIWSVGCIMGEMIKGGVLF 226
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 95/210 (45%), Gaps = 23/210 (10%)
Query: 13 YTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTM-ILVDHPNV 71
Y L ++G+G + V A+ I NE V VKIL + N I RE + + L PN+
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKNK----IKREIKILENLRGGPNI 94
Query: 72 LKSHCSFVSDHNLWVVMPFMSGGSCL--HILKAAYPDGFEEVV---IATILREVLKGLDY 126
+ + V D P + + H+ + ++ + I + E+LK LDY
Sbjct: 95 I-TLADIVKD-------PVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDY 146
Query: 127 LHHHGHIHRDVKSGNILID-VRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEV 185
H G +HRDVK N++ID ++L D+G+ A + G +R V + + PE+
Sbjct: 147 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGL-AEFYHPGQEYNVR---VASRYFKGPEL 202
Query: 186 MEQLHGYDFKADIWSFGITALELAHGHAPF 215
+ YD+ D+WS G + PF
Sbjct: 203 LVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 127/303 (41%), Gaps = 45/303 (14%)
Query: 13 YTLYEEVGQGVSASVHRALCIPFNEIVAVKILD-FERDNSDLSNISREAQTMILVDHPNV 71
+ L +G+G V A P EIVA+K ++ F++ L + RE + + H N+
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL-REIKILKHFKHENI 71
Query: 72 L-----KSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDY 126
+ + SF + + ++++ M LH + + I + + L+ +
Sbjct: 72 ITIFNIQRPDSFENFNEVYIIQELMQTD--LH--RVISTQMLSDDHIQYFIYQTLRAVKV 127
Query: 127 LHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSG-------DRQRMRNTFVGTPC 179
LH IHRD+K N+LI+ +K+ DFG++ + +S +Q FV T
Sbjct: 128 LHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRW 187
Query: 180 WMAPEVMEQLHGYDFKADIWSFG--ITALELAHGHAPFSKYPPMKVLLMTLQNAPPG--- 234
+ APEVM Y D+WS G + L L P Y +L+ + P
Sbjct: 188 YRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDND 247
Query: 235 ---LDYERDRKFSKSFKQ-------------------MIASCLVKDPSKRPSAKKLLKHS 272
++ R R++ KS ++ LV DP+KR +AK+ L+H
Sbjct: 248 LRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHP 307
Query: 273 FFK 275
+ +
Sbjct: 308 YLQ 310
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 115/272 (42%), Gaps = 21/272 (7%)
Query: 8 IGAEHYTLYEEVGQGVSASVHRA-LCIPFNEIVAVKILDFERD---NSDLSNISREAQTM 63
I + +TL +G+G SV A L V V + + D +SD+ REA M
Sbjct: 20 IPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACM 79
Query: 64 ILVDHPNVLK-SHCSFVSDHNL-----WVVMPFMSGGSCLHILKAAY----PDGFEEVVI 113
DHP+V K S S V++PFM G L A+ P +
Sbjct: 80 KEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTL 139
Query: 114 ATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNT 173
+ ++ G++YL IHRD+ + N ++ + + DFG+S ++ SGD R
Sbjct: 140 VRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIY-SGDYYRQGCA 198
Query: 174 FVGTPCWMAPEVMEQLHGYDFKADIWSFGITALE-LAHGHAPFSKYPPMKVLLMTLQNAP 232
W+A E + + Y +D+W+FG+T E + G P++ ++ +
Sbjct: 199 SKLPVKWLALESLAD-NLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIG--- 254
Query: 233 PGLDYERDRKFSKSFKQMIASCLVKDPSKRPS 264
G ++ + + ++ C DP +RPS
Sbjct: 255 -GNRLKQPPECMEEVYDLMYQCWSADPKQRPS 285
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 68/152 (44%), Gaps = 17/152 (11%)
Query: 119 EVLKGLDYLHHHGHIHRDVKSGNILIDV-RGAIKLGDFGVSACLFDSGDRQRMRNTFVGT 177
+V+ + + H G +HRD+K NILID+ RG KL DFG A L D F GT
Sbjct: 147 QVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDE-----PYTDFDGT 201
Query: 178 PCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDY 237
+ PE + + + A +WS GI ++ G PF + ++L L
Sbjct: 202 RVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFER--DQEILEAELHFP------ 253
Query: 238 ERDRKFSKSFKQMIASCLVKDPSKRPSAKKLL 269
S +I CL PS RPS +++L
Sbjct: 254 ---AHVSPDCCALIRRCLAPKPSSRPSLEEIL 282
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 107/245 (43%), Gaps = 21/245 (8%)
Query: 39 VAVKILDFERDNSDLSNISREAQTMILVDHPNVLKSHCSFVSDHNL--WVVMPFMSGGSC 96
VAVK L D + EA + +H N+++ C VS +L +++M M+GG
Sbjct: 63 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR--CIGVSLQSLPRFILMELMAGGDL 120
Query: 97 LHILKAAYPDGFEEVVIAT-----ILREVLKGLDYLHHHGHIHRDVKSGNILIDVRG--- 148
L+ P + +A + R++ G YL + IHRD+ + N L+ G
Sbjct: 121 KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGR 180
Query: 149 AIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEV-MEQLHGYDFKADIWSFGITALE 207
K+GDFG++ ++ + ++ + WM PE ME + + K D WSFG+ E
Sbjct: 181 VAKIGDFGMARDIYRASYYRKGGCAMLPVK-WMPPEAFMEGI--FTSKTDTWSFGVLLWE 237
Query: 208 L-AHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAK 266
+ + G+ P+ P K L+ G + + +++ C P RP+
Sbjct: 238 IFSLGYMPY----PSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFA 293
Query: 267 KLLKH 271
+L+
Sbjct: 294 IILER 298
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 80/190 (42%), Gaps = 32/190 (16%)
Query: 113 IATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN 172
+ ++ ++L+GL Y+H IHRD+K N+ ++ +K+ D G++ D
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDE------MT 180
Query: 173 TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 231
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
Query: 232 PPG------LDYERDRKFSKSFKQM-------------------IASCLVKDPSKRPSAK 266
PG + E R + +S QM + LV D KR +A
Sbjct: 241 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 267 KLLKHSFFKQ 276
+ L H++F Q
Sbjct: 301 QALAHAYFAQ 310
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 127/303 (41%), Gaps = 45/303 (14%)
Query: 13 YTLYEEVGQGVSASVHRALCIPFNEIVAVKILD-FERDNSDLSNISREAQTMILVDHPNV 71
+ L +G+G V A P EIVA+K ++ F++ L + RE + + H N+
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL-REIKILKHFKHENI 71
Query: 72 L-----KSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDY 126
+ + SF + + ++++ M LH + + I + + L+ +
Sbjct: 72 ITIFNIQRPDSFENFNEVYIIQELMQTD--LH--RVISTQMLSDDHIQYFIYQTLRAVKV 127
Query: 127 LHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSG-------DRQRMRNTFVGTPC 179
LH IHRD+K N+LI+ +K+ DFG++ + +S +Q +V T
Sbjct: 128 LHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRW 187
Query: 180 WMAPEVMEQLHGYDFKADIWSFG--ITALELAHGHAPFSKYPPMKVLLMTLQNAPPG--- 234
+ APEVM Y D+WS G + L L P Y +L+ + P
Sbjct: 188 YRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDND 247
Query: 235 ---LDYERDRKFSKSFKQ-------------------MIASCLVKDPSKRPSAKKLLKHS 272
++ R R++ KS ++ LV DP+KR +AK+ L+H
Sbjct: 248 LRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHP 307
Query: 273 FFK 275
+ +
Sbjct: 308 YLQ 310
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 80/190 (42%), Gaps = 32/190 (16%)
Query: 113 IATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN 172
+ ++ ++L+GL Y+H IHRD+K N+ ++ +K+ DF ++ D
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDE------MT 180
Query: 173 TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 231
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
Query: 232 PPG------LDYERDRKFSKSFKQM-------------------IASCLVKDPSKRPSAK 266
PG + E R + +S QM + LV D KR +A
Sbjct: 241 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 267 KLLKHSFFKQ 276
+ L H++F Q
Sbjct: 301 QALAHAYFAQ 310
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 107/245 (43%), Gaps = 21/245 (8%)
Query: 39 VAVKILDFERDNSDLSNISREAQTMILVDHPNVLKSHCSFVSDHNL--WVVMPFMSGGSC 96
VAVK L D + EA + +H N+++ C VS +L +++M M+GG
Sbjct: 78 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR--CIGVSLQSLPRFILMELMAGGDL 135
Query: 97 LHILKAAYPDGFEEVVIAT-----ILREVLKGLDYLHHHGHIHRDVKSGNILIDVRG--- 148
L+ P + +A + R++ G YL + IHRD+ + N L+ G
Sbjct: 136 KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGR 195
Query: 149 AIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPE-VMEQLHGYDFKADIWSFGITALE 207
K+GDFG++ ++ + ++ + WM PE ME + + K D WSFG+ E
Sbjct: 196 VAKIGDFGMARDIYRASYYRKGGCAMLPVK-WMPPEAFMEGI--FTSKTDTWSFGVLLWE 252
Query: 208 L-AHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAK 266
+ + G+ P+ P K L+ G + + +++ C P RP+
Sbjct: 253 IFSLGYMPY----PSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFA 308
Query: 267 KLLKH 271
+L+
Sbjct: 309 IILER 313
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 99/235 (42%), Gaps = 38/235 (16%)
Query: 13 YTLYEEVGQGVSASVHRA---LCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVD-H 68
+ + +++G+G +SV+ A L + E +A+K L S I+ E Q + +
Sbjct: 23 FKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLI---PTSHPIRIAAELQCLTVAGGQ 79
Query: 69 PNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLH 128
NV+ F + ++ + MP++ S L IL + F+EV + + K L +H
Sbjct: 80 DNVMGVKYCFRKNDHVVIAMPYLEHESFLDILNSL---SFQEV--REYMLNLFKALKRIH 134
Query: 129 HHGHIHRDVKSGNILIDVR-GAIKLGDFGVSACLFDSG---------------------- 165
G +HRDVK N L + R L DFG++ D+
Sbjct: 135 QFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCS 194
Query: 166 ---DRQRMRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSK 217
R++ GTP + APEV+ + D+WS G+ L L G PF K
Sbjct: 195 ICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYK 249
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 80/190 (42%), Gaps = 32/190 (16%)
Query: 113 IATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN 172
+ ++ ++L+GL Y+H IHRD+K N+ ++ +K+ D G++ D
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDE------MT 180
Query: 173 TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 231
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
Query: 232 PPG------LDYERDRKFSKSFKQM-------------------IASCLVKDPSKRPSAK 266
PG + E R + +S QM + LV D KR +A
Sbjct: 241 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 267 KLLKHSFFKQ 276
+ L H++F Q
Sbjct: 301 QALAHAYFAQ 310
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 86/204 (42%), Gaps = 17/204 (8%)
Query: 19 VGQGVSASVHRALCIPFNEIVAVKILDFERDN-SDLSNISREAQTMILVDHPNVLKSHCS 77
+G G V A VA+K L N + RE M +V+H N++
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV 91
Query: 78 FVSDHNL------WVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHG 131
F +L ++VM M L + ++ +L ++L G+ +LH G
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDAN-----LSQVIQMELDHERMSYLLYQMLVGIKHLHSAG 146
Query: 132 HIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHG 191
IHRD+K NI++ +K+ DFG++ + M +V T + APEV+ + G
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLAR----TAGTSFMMTPYVVTRYYRAPEVILGM-G 201
Query: 192 YDFKADIWSFGITALELAHGHAPF 215
Y DIWS G E+ G F
Sbjct: 202 YKENVDIWSVGCIMGEMIKGGVLF 225
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 80/190 (42%), Gaps = 32/190 (16%)
Query: 113 IATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN 172
+ ++ ++L+GL Y+H IHRD+K N+ ++ +K+ D G++ D
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDE------MT 180
Query: 173 TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 231
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
Query: 232 PPG------LDYERDRKFSKSFKQM-------------------IASCLVKDPSKRPSAK 266
PG + E R + +S QM + LV D KR +A
Sbjct: 241 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 267 KLLKHSFFKQ 276
+ L H++F Q
Sbjct: 301 QALAHAYFAQ 310
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 105/233 (45%), Gaps = 18/233 (7%)
Query: 39 VAVKILDFERDNSDLSNISREAQTMILVDHPNVLKSHCSFVSDHN-LWVVMPFMSGGSCL 97
VAVK + ++++ EA M + H N+++ V + L++V +M+ GS +
Sbjct: 38 VAVKCI---KNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLV 94
Query: 98 HILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGV 157
L++ + +V + ++YL + +HRD+ + N+L+ K+ DFG+
Sbjct: 95 DYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGL 154
Query: 158 SACLFDSGDRQRMRNTFVGTPC-WMAPEVMEQLHGYDFKADIWSFGITALEL-AHGHAPF 215
+ + D ++ P W APE + + + K+D+WSFGI E+ + G P+
Sbjct: 155 TKEASSTQDTGKL-------PVKWTAPEALRE-AAFSTKSDVWSFGILLWEIYSFGRVPY 206
Query: 216 SKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKL 268
+ P V + G + + +++ +C D + RPS +L
Sbjct: 207 PRIPLKDV----VPRVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQL 255
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 77/163 (47%), Gaps = 13/163 (7%)
Query: 116 ILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFV 175
I + G+++LH + HIHRD+KS NIL+D K+ DFG++ + + + V
Sbjct: 129 IAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARAS-EKFAQXVXXSRIV 187
Query: 176 GTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLL----MTLQNA 231
GT + APE + K+DI+SFG+ LE+ G ++ ++LL
Sbjct: 188 GTTAYXAPEALRG--EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEE 245
Query: 232 PPGLDY------ERDRKFSKSFKQMIASCLVKDPSKRPSAKKL 268
DY + D ++ + + CL + +KRP KK+
Sbjct: 246 KTIEDYIDKKXNDADSTSVEAXYSVASQCLHEKKNKRPDIKKV 288
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 88/184 (47%), Gaps = 14/184 (7%)
Query: 39 VAVKILDFERDNSDLSNISREAQTMILVDHPNVLKSHCSFVSDHN-LWVVMPFMSGGSCL 97
VAVK + ++++ EA M + H N+++ V + L++V +M+ GS +
Sbjct: 219 VAVKCI---KNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLV 275
Query: 98 HILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGV 157
L++ + +V + ++YL + +HRD+ + N+L+ K+ DFG+
Sbjct: 276 DYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGL 335
Query: 158 SACLFDSGDRQRMRNTFVGTPC-WMAPEVMEQLHGYDFKADIWSFGITALEL-AHGHAPF 215
+ + D ++ P W APE + + + K+D+WSFGI E+ + G P+
Sbjct: 336 TKEASSTQDTGKL-------PVKWTAPEALRE-KKFSTKSDVWSFGILLWEIYSFGRVPY 387
Query: 216 SKYP 219
+ P
Sbjct: 388 PRIP 391
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%)
Query: 113 IATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN 172
I L ++L+GL Y+H +HRD+K N+L++ +K+ DFG++ D
Sbjct: 130 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLX 189
Query: 173 TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALEL 208
V T + APE+M GY DIWS G E+
Sbjct: 190 EXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 225
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%)
Query: 113 IATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN 172
I L ++L+GL Y+H +HRD+K N+L++ +K+ DFG++ D
Sbjct: 131 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLX 190
Query: 173 TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALEL 208
V T + APE+M GY DIWS G E+
Sbjct: 191 EXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 226
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 86/204 (42%), Gaps = 17/204 (8%)
Query: 19 VGQGVSASVHRALCIPFNEIVAVKILDFERDN-SDLSNISREAQTMILVDHPNVLKSHCS 77
+G G V A VA+K L N + RE M +V+H N++
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV 91
Query: 78 FVSDHNL------WVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHG 131
F +L ++VM M L + ++ +L ++L G+ +LH G
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDAN-----LSQVIQMELDHERMSYLLYQMLCGIKHLHSAG 146
Query: 132 HIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHG 191
IHRD+K NI++ +K+ DFG++ + M +V T + APEV+ + G
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLAR----TAGTSFMMTPYVVTRYYRAPEVILGM-G 201
Query: 192 YDFKADIWSFGITALELAHGHAPF 215
Y DIWS G E+ G F
Sbjct: 202 YKENVDIWSVGCIMGEMIKGGVLF 225
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 88/184 (47%), Gaps = 14/184 (7%)
Query: 39 VAVKILDFERDNSDLSNISREAQTMILVDHPNVLKSHCSFVSDHN-LWVVMPFMSGGSCL 97
VAVK + ++++ EA M + H N+++ V + L++V +M+ GS +
Sbjct: 32 VAVKCI---KNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLV 88
Query: 98 HILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGV 157
L++ + +V + ++YL + +HRD+ + N+L+ K+ DFG+
Sbjct: 89 DYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGL 148
Query: 158 SACLFDSGDRQRMRNTFVGTPC-WMAPEVMEQLHGYDFKADIWSFGITALEL-AHGHAPF 215
+ + D ++ P W APE + + + K+D+WSFGI E+ + G P+
Sbjct: 149 TKEASSTQDTGKL-------PVKWTAPEALRE-KKFSTKSDVWSFGILLWEIYSFGRVPY 200
Query: 216 SKYP 219
+ P
Sbjct: 201 PRIP 204
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 108/245 (44%), Gaps = 21/245 (8%)
Query: 39 VAVKILDFERDNSDLSNISREAQTMILVDHPNVLKSHCSFVSDHNL--WVVMPFMSGGSC 96
VAVK L D + EA + ++H N+++ C VS +L ++++ M+GG
Sbjct: 64 VAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR--CIGVSLQSLPRFILLELMAGGDL 121
Query: 97 LHILKAAYPDGFEEVVIAT-----ILREVLKGLDYLHHHGHIHRDVKSGNILIDVRG--- 148
L+ P + +A + R++ G YL + IHRD+ + N L+ G
Sbjct: 122 KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGR 181
Query: 149 AIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEV-MEQLHGYDFKADIWSFGITALE 207
K+GDFG++ ++ + ++ + WM PE ME + + K D WSFG+ E
Sbjct: 182 VAKIGDFGMARDIYRASYYRKGGCAMLPVK-WMPPEAFMEGI--FTSKTDTWSFGVLLWE 238
Query: 208 L-AHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAK 266
+ + G+ P+ P K L+ G + + +++ C P RP+
Sbjct: 239 IFSLGYMPY----PSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFA 294
Query: 267 KLLKH 271
+L+
Sbjct: 295 IILER 299
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 91/203 (44%), Gaps = 11/203 (5%)
Query: 19 VGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPNVLKSHCSF 78
+G+G V++ + +VAVK L ER E + + + H N+L+
Sbjct: 38 LGRGGFGKVYKGR-LADGXLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFC 96
Query: 79 VSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVL---KGLDYLHHHGH--- 132
++ +V P+M+ GS L+ P+ + R L +GL YLH H
Sbjct: 97 MTPTERLLVYPYMANGSVASCLRER-PESQPPLDWPKRQRIALGSARGLAYLHDHCDPKI 155
Query: 133 IHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGY 192
IHRDVK+ NIL+D +GDFG+ A L D D + G +APE +
Sbjct: 156 IHRDVKAANILLDEEFEAVVGDFGL-AKLMDYKDXH-VXXAVRGXIGHIAPEYLSTGKSS 213
Query: 193 DFKADIWSFGITALELAHGHAPF 215
+ K D++ +G+ LEL G F
Sbjct: 214 E-KTDVFGYGVMLLELITGQRAF 235
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 88/184 (47%), Gaps = 14/184 (7%)
Query: 39 VAVKILDFERDNSDLSNISREAQTMILVDHPNVLKSHCSFVSDHN-LWVVMPFMSGGSCL 97
VAVK + ++++ EA M + H N+++ V + L++V +M+ GS +
Sbjct: 47 VAVKCI---KNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLV 103
Query: 98 HILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGV 157
L++ + +V + ++YL + +HRD+ + N+L+ K+ DFG+
Sbjct: 104 DYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGL 163
Query: 158 SACLFDSGDRQRMRNTFVGTPC-WMAPEVMEQLHGYDFKADIWSFGITALEL-AHGHAPF 215
+ + D ++ P W APE + + + K+D+WSFGI E+ + G P+
Sbjct: 164 TKEASSTQDTGKL-------PVKWTAPEALRE-KKFSTKSDVWSFGILLWEIYSFGRVPY 215
Query: 216 SKYP 219
+ P
Sbjct: 216 PRIP 219
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 107/245 (43%), Gaps = 21/245 (8%)
Query: 39 VAVKILDFERDNSDLSNISREAQTMILVDHPNVLKSHCSFVSDHNL--WVVMPFMSGGSC 96
VAVK L D + EA + +H N+++ C VS +L ++++ M+GG
Sbjct: 78 VAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR--CIGVSLQSLPRFILLELMAGGDL 135
Query: 97 LHILKAAYPDGFEEVVIAT-----ILREVLKGLDYLHHHGHIHRDVKSGNILIDVRG--- 148
L+ P + +A + R++ G YL + IHRD+ + N L+ G
Sbjct: 136 KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGR 195
Query: 149 AIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPE-VMEQLHGYDFKADIWSFGITALE 207
K+GDFG++ ++ + ++ + WM PE ME + + K D WSFG+ E
Sbjct: 196 VAKIGDFGMARDIYRASYYRKGGCAMLPVK-WMPPEAFMEGI--FTSKTDTWSFGVLLWE 252
Query: 208 L-AHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAK 266
+ + G+ P+ P K L+ G + + +++ C P RP+
Sbjct: 253 IFSLGYMPY----PSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFA 308
Query: 267 KLLKH 271
+L+
Sbjct: 309 IILER 313
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 108/245 (44%), Gaps = 21/245 (8%)
Query: 39 VAVKILDFERDNSDLSNISREAQTMILVDHPNVLKSHCSFVSDHNL--WVVMPFMSGGSC 96
VAVK L D + EA + ++H N+++ C VS +L ++++ M+GG
Sbjct: 78 VAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR--CIGVSLQSLPRFILLELMAGGDL 135
Query: 97 LHILKAAYPDGFEEVVIAT-----ILREVLKGLDYLHHHGHIHRDVKSGNILIDVRG--- 148
L+ P + +A + R++ G YL + IHRD+ + N L+ G
Sbjct: 136 KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGR 195
Query: 149 AIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPE-VMEQLHGYDFKADIWSFGITALE 207
K+GDFG++ ++ + ++ + WM PE ME + + K D WSFG+ E
Sbjct: 196 VAKIGDFGMARDIYRASYYRKGGCAMLPVK-WMPPEAFMEGI--FTSKTDTWSFGVLLWE 252
Query: 208 L-AHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAK 266
+ + G+ P+ P K L+ G + + +++ C P RP+
Sbjct: 253 IFSLGYMPY----PSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFA 308
Query: 267 KLLKH 271
+L+
Sbjct: 309 IILER 313
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 107/245 (43%), Gaps = 21/245 (8%)
Query: 39 VAVKILDFERDNSDLSNISREAQTMILVDHPNVLKSHCSFVSDHNL--WVVMPFMSGGSC 96
VAVK L D + EA + +H N+++ C VS +L ++++ M+GG
Sbjct: 90 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR--CIGVSLQSLPRFILLELMAGGDL 147
Query: 97 LHILKAAYPDGFEEVVIAT-----ILREVLKGLDYLHHHGHIHRDVKSGNILIDVRG--- 148
L+ P + +A + R++ G YL + IHRD+ + N L+ G
Sbjct: 148 KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGR 207
Query: 149 AIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEV-MEQLHGYDFKADIWSFGITALE 207
K+GDFG++ ++ + ++ + WM PE ME + + K D WSFG+ E
Sbjct: 208 VAKIGDFGMARDIYRASYYRKGGCAMLPVK-WMPPEAFMEGI--FTSKTDTWSFGVLLWE 264
Query: 208 L-AHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAK 266
+ + G+ P+ P K L+ G + + +++ C P RP+
Sbjct: 265 IFSLGYMPY----PSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFA 320
Query: 267 KLLKH 271
+L+
Sbjct: 321 IILER 325
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 87/206 (42%), Gaps = 17/206 (8%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDN-SDLSNISREAQTMILVDHP 69
+ Y + +G G V A + VA+K L N + RE M V+H
Sbjct: 62 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 121
Query: 70 NVLKSHCSFVSDHNL------WVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKG 123
N++ F L ++VM M C I + ++ +L ++L G
Sbjct: 122 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME-----LDHERMSYLLYQMLCG 176
Query: 124 LDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAP 183
+ +LH G IHRD+K NI++ +K+ DFG++ + M +V T + AP
Sbjct: 177 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----TAGTSFMMTPYVVTRYYRAP 232
Query: 184 EVMEQLHGYDFKADIWSFGITALELA 209
EV+ + GY DIWS G E+
Sbjct: 233 EVILGM-GYKENVDIWSVGCIMGEMV 257
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 107/245 (43%), Gaps = 21/245 (8%)
Query: 39 VAVKILDFERDNSDLSNISREAQTMILVDHPNVLKSHCSFVSDHNL--WVVMPFMSGGSC 96
VAVK L D + EA + +H N+++ C VS +L ++++ M+GG
Sbjct: 80 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR--CIGVSLQSLPRFILLELMAGGDL 137
Query: 97 LHILKAAYPDGFEEVVIAT-----ILREVLKGLDYLHHHGHIHRDVKSGNILIDVRG--- 148
L+ P + +A + R++ G YL + IHRD+ + N L+ G
Sbjct: 138 KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGR 197
Query: 149 AIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEV-MEQLHGYDFKADIWSFGITALE 207
K+GDFG++ ++ + ++ + WM PE ME + + K D WSFG+ E
Sbjct: 198 VAKIGDFGMARDIYRASYYRKGGCAMLPVK-WMPPEAFMEGI--FTSKTDTWSFGVLLWE 254
Query: 208 L-AHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAK 266
+ + G+ P+ P K L+ G + + +++ C P RP+
Sbjct: 255 IFSLGYMPY----PSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFA 310
Query: 267 KLLKH 271
+L+
Sbjct: 311 IILER 315
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 107/245 (43%), Gaps = 21/245 (8%)
Query: 39 VAVKILDFERDNSDLSNISREAQTMILVDHPNVLKSHCSFVSDHNL--WVVMPFMSGGSC 96
VAVK L D + EA + +H N+++ C VS +L ++++ M+GG
Sbjct: 64 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR--CIGVSLQSLPRFILLELMAGGDL 121
Query: 97 LHILKAAYPDGFEEVVIAT-----ILREVLKGLDYLHHHGHIHRDVKSGNILIDVRG--- 148
L+ P + +A + R++ G YL + IHRD+ + N L+ G
Sbjct: 122 KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGR 181
Query: 149 AIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEV-MEQLHGYDFKADIWSFGITALE 207
K+GDFG++ ++ + ++ + WM PE ME + + K D WSFG+ E
Sbjct: 182 VAKIGDFGMAQDIYRASYYRKGGCAMLPVK-WMPPEAFMEGI--FTSKTDTWSFGVLLWE 238
Query: 208 L-AHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAK 266
+ + G+ P+ P K L+ G + + +++ C P RP+
Sbjct: 239 IFSLGYMPY----PSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFA 294
Query: 267 KLLKH 271
+L+
Sbjct: 295 IILER 299
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 110/256 (42%), Gaps = 34/256 (13%)
Query: 39 VAVKILDFERDNSDLSNISREAQTMI-LVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCL 97
VAVK+L + D+S+ + E + M L H N++ + ++++ + G L
Sbjct: 78 VAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLL 137
Query: 98 HILKAAYPDGFEEVV---------------------IATILREVLKGLDYLHHHGHIHRD 136
+ L++ E+ + + +V KG+++L +HRD
Sbjct: 138 NYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRD 197
Query: 137 VKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHG-YDFK 195
+ + N+L+ +K+ DFG++ + + N + WMAPE + G Y K
Sbjct: 198 LAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVK-WMAPESL--FEGIYTIK 254
Query: 196 ADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKF--SKSFKQMIA 252
+D+WS+GI E+ + G P+ P +QN ++ D+ F ++ ++
Sbjct: 255 SDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNG-----FKMDQPFYATEEIYIIMQ 309
Query: 253 SCLVKDPSKRPSAKKL 268
SC D KRPS L
Sbjct: 310 SCWAFDSRKRPSFPNL 325
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 107/245 (43%), Gaps = 21/245 (8%)
Query: 39 VAVKILDFERDNSDLSNISREAQTMILVDHPNVLKSHCSFVSDHNL--WVVMPFMSGGSC 96
VAVK L D + EA + +H N+++ C VS +L ++++ M+GG
Sbjct: 70 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR--CIGVSLQSLPRFILLELMAGGDL 127
Query: 97 LHILKAAYPDGFEEVVIAT-----ILREVLKGLDYLHHHGHIHRDVKSGNILIDVRG--- 148
L+ P + +A + R++ G YL + IHRD+ + N L+ G
Sbjct: 128 KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGR 187
Query: 149 AIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPE-VMEQLHGYDFKADIWSFGITALE 207
K+GDFG++ ++ + ++ + WM PE ME + + K D WSFG+ E
Sbjct: 188 VAKIGDFGMARDIYRASYYRKGGCAMLPVK-WMPPEAFMEGI--FTSKTDTWSFGVLLWE 244
Query: 208 L-AHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAK 266
+ + G+ P+ P K L+ G + + +++ C P RP+
Sbjct: 245 IFSLGYMPY----PSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFA 300
Query: 267 KLLKH 271
+L+
Sbjct: 301 IILER 305
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 107/245 (43%), Gaps = 21/245 (8%)
Query: 39 VAVKILDFERDNSDLSNISREAQTMILVDHPNVLKSHCSFVSDHNL--WVVMPFMSGGSC 96
VAVK L D + EA + +H N+++ C VS +L ++++ M+GG
Sbjct: 64 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR--CIGVSLQSLPRFILLELMAGGDL 121
Query: 97 LHILKAAYPDGFEEVVIAT-----ILREVLKGLDYLHHHGHIHRDVKSGNILIDVRG--- 148
L+ P + +A + R++ G YL + IHRD+ + N L+ G
Sbjct: 122 KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGR 181
Query: 149 AIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEV-MEQLHGYDFKADIWSFGITALE 207
K+GDFG++ ++ + ++ + WM PE ME + + K D WSFG+ E
Sbjct: 182 VAKIGDFGMARDIYRASYYRKGGCAMLPVK-WMPPEAFMEGI--FTSKTDTWSFGVLLWE 238
Query: 208 L-AHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAK 266
+ + G+ P+ P K L+ G + + +++ C P RP+
Sbjct: 239 IFSLGYMPY----PSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFA 294
Query: 267 KLLKH 271
+L+
Sbjct: 295 IILER 299
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 88/207 (42%), Gaps = 25/207 (12%)
Query: 84 LWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNIL 143
L +V + GG ++ F E + I + + + + YLH HRDVK N+L
Sbjct: 134 LLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSINIAHRDVKPENLL 193
Query: 144 IDVR---GAIKLGDFGVSACLFDSGDRQRMRNTFVGTPC----WMAPEVMEQLHGYDFKA 196
+ +KL DFG + ++ + + TPC ++APEV+ YD
Sbjct: 194 YTSKRPNAILKLTDFGFA--------KETTSHNSLTTPCYTPYYVAPEVLGP-EKYDKSC 244
Query: 197 DIWSFGITALELAHGHAPF------SKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQM 250
D WS G+ L G+ PF + P K + Q P ++ + S+ K +
Sbjct: 245 DXWSLGVIXYILLCGYPPFYSNHGLAISPGXKTRIRXGQYEFPNPEWS---EVSEEVKXL 301
Query: 251 IASCLVKDPSKRPSAKKLLKHSFFKQA 277
I + L +P++R + + H + Q+
Sbjct: 302 IRNLLKTEPTQRXTITEFXNHPWIXQS 328
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 107/245 (43%), Gaps = 21/245 (8%)
Query: 39 VAVKILDFERDNSDLSNISREAQTMILVDHPNVLKSHCSFVSDHNL--WVVMPFMSGGSC 96
VAVK L D + EA + +H N+++ C VS +L ++++ M+GG
Sbjct: 63 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR--CIGVSLQSLPRFILLELMAGGDL 120
Query: 97 LHILKAAYPDGFEEVVIAT-----ILREVLKGLDYLHHHGHIHRDVKSGNILIDVRG--- 148
L+ P + +A + R++ G YL + IHRD+ + N L+ G
Sbjct: 121 KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGR 180
Query: 149 AIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEV-MEQLHGYDFKADIWSFGITALE 207
K+GDFG++ ++ + ++ + WM PE ME + + K D WSFG+ E
Sbjct: 181 VAKIGDFGMARDIYRASYYRKGGCAMLPVK-WMPPEAFMEGI--FTSKTDTWSFGVLLWE 237
Query: 208 L-AHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAK 266
+ + G+ P+ P K L+ G + + +++ C P RP+
Sbjct: 238 IFSLGYMPY----PSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFA 293
Query: 267 KLLKH 271
+L+
Sbjct: 294 IILER 298
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 85/204 (41%), Gaps = 17/204 (8%)
Query: 19 VGQGVSASVHRALCIPFNEIVAVKILDFERDN-SDLSNISREAQTMILVDHPNVLKSHCS 77
+G G V A + VA+K L N + RE M V+H N++
Sbjct: 33 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 92
Query: 78 FVSDHNL------WVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHG 131
F L ++VM M C I + ++ +L ++L G+ +LH G
Sbjct: 93 FTPQKTLEEFQDVYLVMELMDANLCQVIQME-----LDHERMSYLLYQMLCGIKHLHSAG 147
Query: 132 HIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHG 191
IHRD+K NI++ +K+ DFG++ + M +V T + APEV+ + G
Sbjct: 148 IIHRDLKPSNIVVKSDCTLKILDFGLAR----TAGTSFMMTPYVVTRYYRAPEVILGM-G 202
Query: 192 YDFKADIWSFGITALELAHGHAPF 215
Y DIWS G E+ F
Sbjct: 203 YKENVDIWSVGCIMGEMVRHKILF 226
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 84/198 (42%), Gaps = 17/198 (8%)
Query: 19 VGQGVSASVHRALCIPFNEIVAVKILDFERDN-SDLSNISREAQTMILVDHPNVLKSHCS 77
+G G V A + VA+K L N + RE M V+H N++
Sbjct: 70 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 129
Query: 78 FVSDHNL------WVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHG 131
F L ++VM M C I + ++ +L ++L G+ +LH G
Sbjct: 130 FTPQKTLEEFQDVYLVMELMDANLCQVIQME-----LDHERMSYLLYQMLCGIKHLHSAG 184
Query: 132 HIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHG 191
IHRD+K NI++ +K+ DFG++ + M +V T + APEV+ + G
Sbjct: 185 IIHRDLKPSNIVVKSDCTLKILDFGLAR----TAGTSFMMTPYVVTRYYRAPEVILGM-G 239
Query: 192 YDFKADIWSFGITALELA 209
Y DIWS G E+
Sbjct: 240 YKENVDIWSVGCIMGEMV 257
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 107/245 (43%), Gaps = 21/245 (8%)
Query: 39 VAVKILDFERDNSDLSNISREAQTMILVDHPNVLKSHCSFVSDHNL--WVVMPFMSGGSC 96
VAVK L D + EA + +H N+++ C VS +L ++++ M+GG
Sbjct: 55 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR--CIGVSLQSLPRFILLELMAGGDL 112
Query: 97 LHILKAAYPDGFEEVVIAT-----ILREVLKGLDYLHHHGHIHRDVKSGNILIDVRG--- 148
L+ P + +A + R++ G YL + IHRD+ + N L+ G
Sbjct: 113 KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGR 172
Query: 149 AIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPE-VMEQLHGYDFKADIWSFGITALE 207
K+GDFG++ ++ + ++ + WM PE ME + + K D WSFG+ E
Sbjct: 173 VAKIGDFGMARDIYRASYYRKGGCAMLPVK-WMPPEAFMEGI--FTSKTDTWSFGVLLWE 229
Query: 208 L-AHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAK 266
+ + G+ P+ P K L+ G + + +++ C P RP+
Sbjct: 230 IFSLGYMPY----PSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFA 285
Query: 267 KLLKH 271
+L+
Sbjct: 286 IILER 290
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 85/204 (41%), Gaps = 17/204 (8%)
Query: 19 VGQGVSASVHRALCIPFNEIVAVKILDFERDN-SDLSNISREAQTMILVDHPNVLKSHCS 77
+G G V A + VA+K L N + RE M V+H N++
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 91
Query: 78 FVSDHNL------WVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHG 131
F L ++VM M C I + ++ +L ++L G+ +LH G
Sbjct: 92 FTPQKTLEEFQDVYLVMELMDANLCQVIQME-----LDHERMSYLLYQMLCGIKHLHSAG 146
Query: 132 HIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHG 191
IHRD+K NI++ +K+ DFG++ + M +V T + APEV+ + G
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLAR----TAGTSFMMTPYVVTRYYRAPEVILGM-G 201
Query: 192 YDFKADIWSFGITALELAHGHAPF 215
Y DIWS G E+ F
Sbjct: 202 YKENVDIWSVGCIMGEMVRHKILF 225
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 85/204 (41%), Gaps = 17/204 (8%)
Query: 19 VGQGVSASVHRALCIPFNEIVAVKILDFERDN-SDLSNISREAQTMILVDHPNVLKSHCS 77
+G G V A + VA+K L N + RE M V+H N++
Sbjct: 31 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 90
Query: 78 FVSDHNL------WVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHG 131
F L ++VM M C I + ++ +L ++L G+ +LH G
Sbjct: 91 FTPQKTLEEFQDVYLVMELMDANLCQVIQME-----LDHERMSYLLYQMLCGIKHLHSAG 145
Query: 132 HIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHG 191
IHRD+K NI++ +K+ DFG++ + M +V T + APEV+ + G
Sbjct: 146 IIHRDLKPSNIVVKSDCTLKILDFGLAR----TAGTSFMMTPYVVTRYYRAPEVILGM-G 200
Query: 192 YDFKADIWSFGITALELAHGHAPF 215
Y DIWS G E+ F
Sbjct: 201 YKENVDIWSVGCIMGEMVRHKILF 224
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 85/204 (41%), Gaps = 17/204 (8%)
Query: 19 VGQGVSASVHRALCIPFNEIVAVKILDFERDN-SDLSNISREAQTMILVDHPNVLKSHCS 77
+G G V A + VA+K L N + RE M V+H N++
Sbjct: 33 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 92
Query: 78 FVSDHNL------WVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHG 131
F L ++VM M C I + ++ +L ++L G+ +LH G
Sbjct: 93 FTPQKTLEEFQDVYLVMELMDANLCQVIQME-----LDHERMSYLLYQMLCGIKHLHSAG 147
Query: 132 HIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHG 191
IHRD+K NI++ +K+ DFG++ + M +V T + APEV+ + G
Sbjct: 148 IIHRDLKPSNIVVKSDCTLKILDFGLAR----TAGTSFMMTPYVVTRYYRAPEVILGM-G 202
Query: 192 YDFKADIWSFGITALELAHGHAPF 215
Y DIWS G E+ F
Sbjct: 203 YKENVDIWSVGCIMGEMVRHKILF 226
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 85/204 (41%), Gaps = 17/204 (8%)
Query: 19 VGQGVSASVHRALCIPFNEIVAVKILDFERDN-SDLSNISREAQTMILVDHPNVLKSHCS 77
+G G V A + VA+K L N + RE M V+H N++
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 91
Query: 78 FVSDHNL------WVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHG 131
F L ++VM M C I + ++ +L ++L G+ +LH G
Sbjct: 92 FTPQKTLEEFQDVYLVMELMDANLCQVIQME-----LDHERMSYLLYQMLCGIKHLHSAG 146
Query: 132 HIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHG 191
IHRD+K NI++ +K+ DFG++ + M +V T + APEV+ + G
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLAR----TAGTSFMMTPYVVTRYYRAPEVILGM-G 201
Query: 192 YDFKADIWSFGITALELAHGHAPF 215
Y DIWS G E+ F
Sbjct: 202 YKENVDIWSVGCIMGEMVRHKILF 225
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 85/204 (41%), Gaps = 17/204 (8%)
Query: 19 VGQGVSASVHRALCIPFNEIVAVKILDFERDN-SDLSNISREAQTMILVDHPNVLKSHCS 77
+G G V A VA+K L N + RE M V+H N++
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 78 FVSDHNL------WVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHG 131
F +L ++VM M L + ++ +L ++L G+ +LH G
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDAN-----LSQVIQMELDHERMSYLLYQMLCGIKHLHSAG 146
Query: 132 HIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHG 191
IHRD+K NI++ +K+ DFG++ + M +V T + APEV+ + G
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLAR----TAGTSFMMTPYVVTRYYRAPEVILGM-G 201
Query: 192 YDFKADIWSFGITALELAHGHAPF 215
Y DIWS G E+ G F
Sbjct: 202 YKENVDIWSVGCIMGEMIKGGVLF 225
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 126/303 (41%), Gaps = 45/303 (14%)
Query: 13 YTLYEEVGQGVSASVHRALCIPFNEIVAVKILD-FERDNSDLSNISREAQTMILVDHPNV 71
+ L +G+G V A P EIVA+K ++ F++ L + RE + + H N+
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL-REIKILKHFKHENI 71
Query: 72 L-----KSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDY 126
+ + SF + + ++++ M LH + + I + + L+ +
Sbjct: 72 ITIFNIQRPDSFENFNEVYIIQELMQTD--LH--RVISTQMLSDDHIQYFIYQTLRAVKV 127
Query: 127 LHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSG-------DRQRMRNTFVGTPC 179
LH IHRD+K N+LI+ +K+ DFG++ + +S +Q V T
Sbjct: 128 LHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRW 187
Query: 180 WMAPEVMEQLHGYDFKADIWSFG--ITALELAHGHAPFSKYPPMKVLLMTLQNAPPG--- 234
+ APEVM Y D+WS G + L L P Y +L+ + P
Sbjct: 188 YRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDND 247
Query: 235 ---LDYERDRKFSKSFKQ-------------------MIASCLVKDPSKRPSAKKLLKHS 272
++ R R++ KS ++ LV DP+KR +AK+ L+H
Sbjct: 248 LRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHP 307
Query: 273 FFK 275
+ +
Sbjct: 308 YLQ 310
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 85/204 (41%), Gaps = 17/204 (8%)
Query: 19 VGQGVSASVHRALCIPFNEIVAVKILDFERDN-SDLSNISREAQTMILVDHPNVLKSHCS 77
+G G V A + VA+K L N + RE M V+H N++
Sbjct: 26 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 85
Query: 78 FVSDHNL------WVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHG 131
F L ++VM M C I + ++ +L ++L G+ +LH G
Sbjct: 86 FTPQKTLEEFQDVYLVMELMDANLCQVIQME-----LDHERMSYLLYQMLCGIKHLHSAG 140
Query: 132 HIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHG 191
IHRD+K NI++ +K+ DFG++ + M +V T + APEV+ + G
Sbjct: 141 IIHRDLKPSNIVVKSDCTLKILDFGLAR----TAGTSFMMTPYVVTRYYRAPEVILGM-G 195
Query: 192 YDFKADIWSFGITALELAHGHAPF 215
Y DIWS G E+ F
Sbjct: 196 YKENVDIWSVGCIMGEMVRHKILF 219
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 85/204 (41%), Gaps = 17/204 (8%)
Query: 19 VGQGVSASVHRALCIPFNEIVAVKILDFERDN-SDLSNISREAQTMILVDHPNVLKSHCS 77
+G G V A + VA+K L N + RE M V+H N++
Sbjct: 26 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 85
Query: 78 FVSDHNL------WVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHG 131
F L ++VM M C I + ++ +L ++L G+ +LH G
Sbjct: 86 FTPQKTLEEFQDVYLVMELMDANLCQVIQME-----LDHERMSYLLYQMLCGIKHLHSAG 140
Query: 132 HIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHG 191
IHRD+K NI++ +K+ DFG++ + M +V T + APEV+ + G
Sbjct: 141 IIHRDLKPSNIVVKSDCTLKILDFGLAR----TAGTSFMMTPYVVTRYYRAPEVILGM-G 195
Query: 192 YDFKADIWSFGITALELAHGHAPF 215
Y DIWS G E+ F
Sbjct: 196 YKENVDIWSVGCIMGEMVRHKILF 219
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 85/204 (41%), Gaps = 17/204 (8%)
Query: 19 VGQGVSASVHRALCIPFNEIVAVKILDFERDN-SDLSNISREAQTMILVDHPNVLKSHCS 77
+G G V A + VA+K L N + RE M V+H N++
Sbjct: 25 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 84
Query: 78 FVSDHNL------WVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHG 131
F L ++VM M C I + ++ +L ++L G+ +LH G
Sbjct: 85 FTPQKTLEEFQDVYLVMELMDANLCQVIQME-----LDHERMSYLLYQMLCGIKHLHSAG 139
Query: 132 HIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHG 191
IHRD+K NI++ +K+ DFG++ + M +V T + APEV+ + G
Sbjct: 140 IIHRDLKPSNIVVKSDCTLKILDFGLAR----TAGTSFMMTPYVVTRYYRAPEVILGM-G 194
Query: 192 YDFKADIWSFGITALELAHGHAPF 215
Y DIWS G E+ F
Sbjct: 195 YKENVDIWSVGCIMGEMVRHKILF 218
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 85/204 (41%), Gaps = 17/204 (8%)
Query: 19 VGQGVSASVHRALCIPFNEIVAVKILDFERDN-SDLSNISREAQTMILVDHPNVLKSHCS 77
+G G V A + VA+K L N + RE M V+H N++
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNV 91
Query: 78 FVSDHNL------WVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHG 131
F L ++VM M C I + ++ +L ++L G+ +LH G
Sbjct: 92 FTPQKTLEEFQDVYLVMELMDANLCQVIQME-----LDHERMSYLLYQMLCGIKHLHSAG 146
Query: 132 HIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHG 191
IHRD+K NI++ +K+ DFG++ + M +V T + APEV+ + G
Sbjct: 147 IIHRDLKPSNIVVKSDXTLKILDFGLAR----TAGTSFMMTPYVVTRYYRAPEVILGM-G 201
Query: 192 YDFKADIWSFGITALELAHGHAPF 215
Y DIWS G E+ F
Sbjct: 202 YKENVDIWSVGCIMGEMVRHKILF 225
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 88/212 (41%), Gaps = 17/212 (8%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDN-SDLSNISREAQTMILVDHP 69
+ Y + +G G V A VA+K L N + RE M V+H
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 70 NVLKSHCSFVSDHNL------WVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKG 123
N++ F +L ++VM M C I + ++ +L ++L G
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-----LDHERMSYLLYQMLCG 138
Query: 124 LDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAP 183
+ +LH G IHRD+K NI++ +K+ DFG++ + M V T + AP
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----TAGTSFMMTPEVVTRYYRAP 194
Query: 184 EVMEQLHGYDFKADIWSFGITALELAHGHAPF 215
EV+ + GY DIWS G E+ G F
Sbjct: 195 EVILGM-GYKENVDIWSVGCIMGEMIKGGVLF 225
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 85/204 (41%), Gaps = 17/204 (8%)
Query: 19 VGQGVSASVHRALCIPFNEIVAVKILDFERDN-SDLSNISREAQTMILVDHPNVLKSHCS 77
+G G V A VA+K L N + RE M V+H N++
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 78 FVSDHNL------WVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHG 131
F +L ++VM M L + ++ +L ++L G+ +LH G
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDAN-----LSQVIQMELDHERMSYLLYQMLCGIKHLHSAG 146
Query: 132 HIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHG 191
IHRD+K NI++ +K+ DFG++ + M +V T + APEV+ + G
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLAR----TAGTSFMMTPYVVTRYYRAPEVILGM-G 201
Query: 192 YDFKADIWSFGITALELAHGHAPF 215
Y DIWS G E+ G F
Sbjct: 202 YKENVDIWSVGCIMGEMIKGGVLF 225
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 96/206 (46%), Gaps = 12/206 (5%)
Query: 13 YTLYEEVGQGVSASVHRALCIPFNEIVAVK--ILDFERDNSDLSNISREAQTMILVDHPN 70
Y ++GQG V +A + VA+K +++ E++ ++ + RE + + L+ H N
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITAL-REIKILQLLKHEN 78
Query: 71 V--LKSHC-SFVSDHNLWVVMPFMSGGSCLHILKAAYPD---GFEEVVIATILREVLKGL 124
V L C + S +N ++ C H L + F I +++ +L GL
Sbjct: 79 VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGL 138
Query: 125 DYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQ--RMRNTFVGTPCWMA 182
Y+H + +HRD+K+ N+LI G +KL DFG++ + + Q R N V T +
Sbjct: 139 YYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-TLWYRP 197
Query: 183 PEVMEQLHGYDFKADIWSFGITALEL 208
PE++ Y D+W G E+
Sbjct: 198 PELLLGERDYGPPIDLWGAGCIMAEM 223
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 96/206 (46%), Gaps = 12/206 (5%)
Query: 13 YTLYEEVGQGVSASVHRALCIPFNEIVAVK--ILDFERDNSDLSNISREAQTMILVDHPN 70
Y ++GQG V +A + VA+K +++ E++ ++ + RE + + L+ H N
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITAL-REIKILQLLKHEN 78
Query: 71 V--LKSHC-SFVSDHNLWVVMPFMSGGSCLHILKAAYPD---GFEEVVIATILREVLKGL 124
V L C + S +N ++ C H L + F I +++ +L GL
Sbjct: 79 VVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGL 138
Query: 125 DYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQ--RMRNTFVGTPCWMA 182
Y+H + +HRD+K+ N+LI G +KL DFG++ + + Q R N V T +
Sbjct: 139 YYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-TLWYRP 197
Query: 183 PEVMEQLHGYDFKADIWSFGITALEL 208
PE++ Y D+W G E+
Sbjct: 198 PELLLGERDYGPPIDLWGAGCIMAEM 223
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 74/179 (41%), Gaps = 12/179 (6%)
Query: 119 EVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTP 178
+V +G+DYL IHRD+ + NIL+ K+ DFG+S G ++ T P
Sbjct: 140 DVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLS-----RGQEVYVKKTMGRLP 194
Query: 179 C-WMAPEVMEQLHGYDFKADIWSFGITALELAH-GHAPFSKYPPMKVLLMTLQNAPPGLD 236
WMA E + Y +D+WS+G+ E+ G P+ ++ + P G
Sbjct: 195 VRWMAIESL-NYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAEL----YEKLPQGYR 249
Query: 237 YERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSFFKQARSNEYIARTLLEGLPALG 295
E+ ++ C + P +RPS ++L Y+ TL E G
Sbjct: 250 LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKTYVNTTLYEKFTYAG 308
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 74/179 (41%), Gaps = 12/179 (6%)
Query: 119 EVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTP 178
+V +G+DYL IHRD+ + NIL+ K+ DFG+S G ++ T P
Sbjct: 150 DVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLS-----RGQEVYVKKTMGRLP 204
Query: 179 C-WMAPEVMEQLHGYDFKADIWSFGITALELAH-GHAPFSKYPPMKVLLMTLQNAPPGLD 236
WMA E + Y +D+WS+G+ E+ G P+ ++ + P G
Sbjct: 205 VRWMAIESL-NYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAEL----YEKLPQGYR 259
Query: 237 YERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSFFKQARSNEYIARTLLEGLPALG 295
E+ ++ C + P +RPS ++L Y+ TL E G
Sbjct: 260 LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKTYVNTTLYEKFTYAG 318
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 120/279 (43%), Gaps = 20/279 (7%)
Query: 5 KYPIGAEHYTLYEEVGQGVSASVHRALCIPF-----NEIVAVKILDFERDNSDLSNISRE 59
++ + E T+ E+GQG V+ + VA+K ++ + E
Sbjct: 12 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 71
Query: 60 AQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIA----- 114
A M + +V++ V+M M+ G L++ P+ V+A
Sbjct: 72 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 131
Query: 115 ---TILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMR 171
+ E+ G+ YL+ + +HRD+ + N ++ +K+GDFG++ ++++ D R
Sbjct: 132 KMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET-DYYRKG 190
Query: 172 NTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAH-GHAPFSKYPPMKVLLMTLQN 230
+ WM+PE ++ + +D+WSFG+ E+A P+ +VL ++
Sbjct: 191 GKGLLPVRWMSPESLKD-GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEG 249
Query: 231 APPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLL 269
GL + D F +++ C +P RPS +++
Sbjct: 250 ---GLLDKPDNCPDMLF-ELMRMCWQYNPKMRPSFLEII 284
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 123/292 (42%), Gaps = 52/292 (17%)
Query: 21 QGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPNVLKSHCSFV- 79
+G+ ++ R FN + + ++ D+ + RE + + HPN+L FV
Sbjct: 45 EGIPVAIKRV----FNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVH 100
Query: 80 ----SDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIA-----TILREVLKGLDYLHHH 130
+ H L++V M L D + +VI+ + +L GL LH
Sbjct: 101 FEEPAMHKLYLVTELMRTD-----LAQVIHD--QRIVISPQHIQYFMYHILLGLHVLHEA 153
Query: 131 GHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLH 190
G +HRD+ GNIL+ I + DF ++ D+ D + +V + APE++ Q
Sbjct: 154 GVVHRDLHPGNILLADNNDITICDFNLARE--DTADANKTH--YVTHRWYRAPELVMQFK 209
Query: 191 GYDFKADIWSFGITALELAHGHAPF---SKYPPMKVLL----------MTLQNAPPGLDY 237
G+ D+WS G E+ + A F + Y + ++ + + ++P DY
Sbjct: 210 GFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDY 269
Query: 238 ERD-------RKFSKSFK-------QMIASCLVKDPSKRPSAKKLLKHSFFK 275
R+ R ++ +IA L +P +R S ++ L+H +F+
Sbjct: 270 LRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFE 321
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 93/214 (43%), Gaps = 23/214 (10%)
Query: 13 YTLYEEVGQGVSASVHRALCIPFNEIVAV-KILDFERDNSDLSNISREAQTMILVDHPNV 71
YT + +G G V++A E+VA+ K+L +R +RE Q M +DH N+
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK------NRELQIMRKLDHCNI 109
Query: 72 LKSHCSFVSDH--------NLWV-VMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLK 122
++ F S NL + +P H +A + + + ++ +
Sbjct: 110 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK--QTLPVIYVKLYMYQLFR 167
Query: 123 GLDYLHHHGHIHRDVKSGNILIDVRGAI-KLGDFGVSACLFDSGDRQRMRNTFVGTPCWM 181
L Y+H G HRD+K N+L+D A+ KL DFG + L R +++ + +
Sbjct: 168 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV----RGEPNVSYICSRYYR 223
Query: 182 APEVMEQLHGYDFKADIWSFGITALELAHGHAPF 215
APE++ Y D+WS G EL G F
Sbjct: 224 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 257
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 120/279 (43%), Gaps = 20/279 (7%)
Query: 5 KYPIGAEHYTLYEEVGQGVSASVHRALCIPF-----NEIVAVKILDFERDNSDLSNISRE 59
++ + E T+ E+GQG V+ + VA+K ++ + E
Sbjct: 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 78
Query: 60 AQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIA----- 114
A M + +V++ V+M M+ G L++ P+ V+A
Sbjct: 79 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 138
Query: 115 ---TILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMR 171
+ E+ G+ YL+ + +HRD+ + N ++ +K+GDFG++ ++++ D R
Sbjct: 139 KMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET-DYYRKG 197
Query: 172 NTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAH-GHAPFSKYPPMKVLLMTLQN 230
+ WM+PE ++ + +D+WSFG+ E+A P+ +VL ++
Sbjct: 198 GKGLLPVRWMSPESLKD-GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEG 256
Query: 231 APPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLL 269
GL + D F +++ C +P RPS +++
Sbjct: 257 ---GLLDKPDNCPDMLF-ELMRMCWQYNPKMRPSFLEII 291
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 113/296 (38%), Gaps = 42/296 (14%)
Query: 10 AEHYTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHP 69
A L E VG+G V R L E VAVKI + S E +L+ H
Sbjct: 7 ARQVALVECVGKGRYGEVWRGLW--HGESVAVKIFSSRDEQSWFRET--EIYNTVLLRHD 62
Query: 70 NVLKSHCSFVSDHN----LWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLD 125
N+L S ++ N LW++ + GS L+ E + + GL
Sbjct: 63 NILGFIASDMTSRNSSTQLWLITHYHEHGSLYDFLQR---QTLEPHLALRLAVSAACGLA 119
Query: 126 YLHHH--------GHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRM-RNTFVG 176
+LH HRD KS N+L+ + D G++ D + N VG
Sbjct: 120 HLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVG 179
Query: 177 TPCWMAPEVM-EQLHGYDFKA----DIWSFGITALELAHG----------HAPFSKYPP- 220
T +MAPEV+ EQ+ F++ DIW+FG+ E+A PF P
Sbjct: 180 TKRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEIARRTIVNGIVEDYRPPFYDVVPN 239
Query: 221 ------MKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLK 270
MK ++ Q P + QM+ C +PS R +A ++ K
Sbjct: 240 DPSFEDMKKVVCVDQQTPTIPNRLAADPVLSGLAQMMRECWYPNPSARLTALRIKK 295
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 120/279 (43%), Gaps = 20/279 (7%)
Query: 5 KYPIGAEHYTLYEEVGQGVSASVHRALCIPF-----NEIVAVKILDFERDNSDLSNISRE 59
++ + E T+ E+GQG V+ + VA+K ++ + E
Sbjct: 10 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 69
Query: 60 AQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIA----- 114
A M + +V++ V+M M+ G L++ P+ V+A
Sbjct: 70 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 129
Query: 115 ---TILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMR 171
+ E+ G+ YL+ + +HRD+ + N ++ +K+GDFG++ ++++ D R
Sbjct: 130 KMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET-DYYRKG 188
Query: 172 NTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAH-GHAPFSKYPPMKVLLMTLQN 230
+ WM+PE ++ + +D+WSFG+ E+A P+ +VL ++
Sbjct: 189 GKGLLPVRWMSPESLKD-GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEG 247
Query: 231 APPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLL 269
GL + D F +++ C +P RPS +++
Sbjct: 248 ---GLLDKPDNCPDMLF-ELMRMCWQYNPKMRPSFLEII 282
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 93/214 (43%), Gaps = 23/214 (10%)
Query: 13 YTLYEEVGQGVSASVHRALCIPFNEIVAV-KILDFERDNSDLSNISREAQTMILVDHPNV 71
YT + +G G V++A E+VA+ K+L +R +RE Q M +DH N+
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK------NRELQIMRKLDHCNI 111
Query: 72 LKSHCSFVSDH--------NLWV-VMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLK 122
++ F S NL + +P H +A + + + ++ +
Sbjct: 112 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK--QTLPVIYVKLYMYQLFR 169
Query: 123 GLDYLHHHGHIHRDVKSGNILIDVRGAI-KLGDFGVSACLFDSGDRQRMRNTFVGTPCWM 181
L Y+H G HRD+K N+L+D A+ KL DFG + L R +++ + +
Sbjct: 170 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV----RGEPNVSYICSRYYR 225
Query: 182 APEVMEQLHGYDFKADIWSFGITALELAHGHAPF 215
APE++ Y D+WS G EL G F
Sbjct: 226 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 259
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 84/198 (42%), Gaps = 17/198 (8%)
Query: 19 VGQGVSASVHRALCIPFNEIVAVKILDFERDN-SDLSNISREAQTMILVDHPNVLKSHCS 77
+G G V A VA+K L N + RE M V+H N++
Sbjct: 37 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 96
Query: 78 FVSDHNL------WVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHG 131
F +L ++VM M C I + ++ +L ++L G+ +LH G
Sbjct: 97 FTPQKSLEEFQDVYIVMELMDANLCQVIQME-----LDHERMSYLLYQMLCGIKHLHSAG 151
Query: 132 HIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHG 191
IHRD+K NI++ +K+ DFG++ + M +V T + APEV+ + G
Sbjct: 152 IIHRDLKPSNIVVKSDCTLKILDFGLAR----TAGTSFMMTPYVVTRYYRAPEVILGM-G 206
Query: 192 YDFKADIWSFGITALELA 209
Y D+WS G E+
Sbjct: 207 YKENVDLWSVGCIMGEMV 224
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 123/292 (42%), Gaps = 52/292 (17%)
Query: 21 QGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPNVLKSHCSFV- 79
+G+ ++ R FN + + ++ D+ + RE + + HPN+L FV
Sbjct: 45 EGIPVAIKRV----FNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVH 100
Query: 80 ----SDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIA-----TILREVLKGLDYLHHH 130
+ H L++V M L D + +VI+ + +L GL LH
Sbjct: 101 FEEPAMHKLYLVTELMRTD-----LAQVIHD--QRIVISPQHIQYFMYHILLGLHVLHEA 153
Query: 131 GHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLH 190
G +HRD+ GNIL+ I + DF ++ D+ D + +V + APE++ Q
Sbjct: 154 GVVHRDLHPGNILLADNNDITICDFNLARE--DTADANKTH--YVTHRWYRAPELVMQFK 209
Query: 191 GYDFKADIWSFGITALELAHGHAPF---SKYPPMKVLL----------MTLQNAPPGLDY 237
G+ D+WS G E+ + A F + Y + ++ + + ++P DY
Sbjct: 210 GFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDY 269
Query: 238 ERD-------RKFSKSFK-------QMIASCLVKDPSKRPSAKKLLKHSFFK 275
R+ R ++ +IA L +P +R S ++ L+H +F+
Sbjct: 270 LRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFE 321
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 120/279 (43%), Gaps = 20/279 (7%)
Query: 5 KYPIGAEHYTLYEEVGQGVSASVHRALCIPF-----NEIVAVKILDFERDNSDLSNISRE 59
++ + E T+ E+GQG V+ + VA+K ++ + E
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 65
Query: 60 AQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIA----- 114
A M + +V++ V+M M+ G L++ P+ V+A
Sbjct: 66 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 125
Query: 115 ---TILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMR 171
+ E+ G+ YL+ + +HRD+ + N ++ +K+GDFG++ ++++ D R
Sbjct: 126 KMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET-DYYRKG 184
Query: 172 NTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAH-GHAPFSKYPPMKVLLMTLQN 230
+ WM+PE ++ + +D+WSFG+ E+A P+ +VL ++
Sbjct: 185 GKGLLPVRWMSPESLKD-GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEG 243
Query: 231 APPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLL 269
GL + D F +++ C +P RPS +++
Sbjct: 244 ---GLLDKPDNCPDMLF-ELMRMCWQYNPKMRPSFLEII 278
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 88/197 (44%), Gaps = 32/197 (16%)
Query: 35 FNEIVAVKILDFERDNSDLSNISREAQTMILVDHPNVLKSHCSFVS--------DHNLWV 86
NE VAVKI + D N E ++ + H N+L+ F+ D +LW+
Sbjct: 46 LNEYVAVKIFPIQ-DKQSWQN-EYEVYSLPGMKHENILQ----FIGAEKRGTSVDVDLWL 99
Query: 87 VMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHH------GH----IHRD 136
+ F GS LKA E IA + +GL YLH GH HRD
Sbjct: 100 ITAFHEKGSLSDFLKANVVSWNELCHIAETMA---RGLAYLHEDIPGLKDGHKPAISHRD 156
Query: 137 VKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYD--- 193
+KS N+L+ + DFG+ A F++G + VGT +MAPEV+E +
Sbjct: 157 IKSKNVLLKNNLTACIADFGL-ALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDA 215
Query: 194 -FKADIWSFGITALELA 209
+ D+++ G+ ELA
Sbjct: 216 FLRIDMYAMGLVLWELA 232
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 93/214 (43%), Gaps = 23/214 (10%)
Query: 13 YTLYEEVGQGVSASVHRALCIPFNEIVAV-KILDFERDNSDLSNISREAQTMILVDHPNV 71
YT + +G G V++A E+VA+ K+L +R +RE Q M +DH N+
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK------NRELQIMRKLDHCNI 113
Query: 72 LKSHCSFVSDH--------NLWV-VMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLK 122
++ F S NL + +P H +A + + + ++ +
Sbjct: 114 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK--QTLPVIYVKLYMYQLFR 171
Query: 123 GLDYLHHHGHIHRDVKSGNILIDVRGAI-KLGDFGVSACLFDSGDRQRMRNTFVGTPCWM 181
L Y+H G HRD+K N+L+D A+ KL DFG + L R +++ + +
Sbjct: 172 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV----RGEPNVSYICSRYYR 227
Query: 182 APEVMEQLHGYDFKADIWSFGITALELAHGHAPF 215
APE++ Y D+WS G EL G F
Sbjct: 228 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 261
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 93/214 (43%), Gaps = 23/214 (10%)
Query: 13 YTLYEEVGQGVSASVHRALCIPFNEIVAV-KILDFERDNSDLSNISREAQTMILVDHPNV 71
YT + +G G V++A E+VA+ K+L +R +RE Q M +DH N+
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK------NRELQIMRKLDHCNI 103
Query: 72 LKSHCSFVSDH--------NLWV-VMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLK 122
++ F S NL + +P H +A + + + ++ +
Sbjct: 104 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK--QTLPVIYVKLYMYQLFR 161
Query: 123 GLDYLHHHGHIHRDVKSGNILIDVRGAI-KLGDFGVSACLFDSGDRQRMRNTFVGTPCWM 181
L Y+H G HRD+K N+L+D A+ KL DFG + L R +++ + +
Sbjct: 162 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV----RGEPNVSYICSRYYR 217
Query: 182 APEVMEQLHGYDFKADIWSFGITALELAHGHAPF 215
APE++ Y D+WS G EL G F
Sbjct: 218 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 251
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 84/204 (41%), Gaps = 17/204 (8%)
Query: 19 VGQGVSASVHRALCIPFNEIVAVKILDFERDN-SDLSNISREAQTMILVDHPNVLKSHCS 77
+G G V A + VA+K L N + RE M V+H N++
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNV 91
Query: 78 FVSDHNL------WVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHG 131
F L ++VM M L + ++ +L ++L G+ +LH G
Sbjct: 92 FTPQKTLEEFQDVYLVMELMDAN-----LXQVIQMELDHERMSYLLYQMLXGIKHLHSAG 146
Query: 132 HIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHG 191
IHRD+K NI++ +K+ DFG++ + M +V T + APEV+ + G
Sbjct: 147 IIHRDLKPSNIVVKSDXTLKILDFGLAR----TAGTSFMMTPYVVTRYYRAPEVILGM-G 201
Query: 192 YDFKADIWSFGITALELAHGHAPF 215
Y DIWS G E+ F
Sbjct: 202 YKENVDIWSVGCIMGEMVRHKILF 225
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 84/204 (41%), Gaps = 17/204 (8%)
Query: 19 VGQGVSASVHRALCIPFNEIVAVKILDFERDN-SDLSNISREAQTMILVDHPNVLKSHCS 77
+G G V A + VA+K L N + RE M V+H N++
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 91
Query: 78 FVSDHNL------WVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHG 131
F L ++VM M L + ++ +L ++L G+ +LH G
Sbjct: 92 FTPQKTLEEFQDVYLVMELMDAN-----LXQVIQMELDHERMSYLLYQMLXGIKHLHSAG 146
Query: 132 HIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHG 191
IHRD+K NI++ +K+ DFG++ + M +V T + APEV+ + G
Sbjct: 147 IIHRDLKPSNIVVKSDXTLKILDFGLAR----TAGTSFMMTPYVVTRYYRAPEVILGM-G 201
Query: 192 YDFKADIWSFGITALELAHGHAPF 215
Y DIWS G E+ F
Sbjct: 202 YKENVDIWSVGCIMGEMVRHKILF 225
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 84/198 (42%), Gaps = 17/198 (8%)
Query: 19 VGQGVSASVHRALCIPFNEIVAVKILDFERDN-SDLSNISREAQTMILVDHPNVLKSHCS 77
+G G V A VA+K L N + RE M V+H N++
Sbjct: 26 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 85
Query: 78 FVSDHNL------WVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHG 131
F +L ++VM M C I + ++ +L ++L G+ +LH G
Sbjct: 86 FTPQKSLEEFQDVYIVMELMDANLCQVIQME-----LDHERMSYLLYQMLCGIKHLHSAG 140
Query: 132 HIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHG 191
IHRD+K NI++ +K+ DFG++ + M +V T + APEV+ + G
Sbjct: 141 IIHRDLKPSNIVVKSDCTLKILDFGLAR----TAGTSFMMTPYVVTRYYRAPEVILGM-G 195
Query: 192 YDFKADIWSFGITALELA 209
Y D+WS G E+
Sbjct: 196 YKENVDLWSVGCIMGEMV 213
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 120/279 (43%), Gaps = 20/279 (7%)
Query: 5 KYPIGAEHYTLYEEVGQGVSASVHRALCIPF-----NEIVAVKILDFERDNSDLSNISRE 59
++ + E T+ E+GQG V+ + VA+K ++ + E
Sbjct: 12 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 71
Query: 60 AQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIA----- 114
A M + +V++ V+M M+ G L++ P+ V+A
Sbjct: 72 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 131
Query: 115 ---TILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMR 171
+ E+ G+ YL+ + +HRD+ + N ++ +K+GDFG++ ++++ D R
Sbjct: 132 KMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET-DYYRKG 190
Query: 172 NTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAH-GHAPFSKYPPMKVLLMTLQN 230
+ WM+PE ++ + +D+WSFG+ E+A P+ +VL ++
Sbjct: 191 GKGLLPVRWMSPESLKD-GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEG 249
Query: 231 APPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLL 269
GL + D F +++ C +P RPS +++
Sbjct: 250 ---GLLDKPDNCPDMLF-ELMRMCWQYNPKMRPSFLEII 284
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 120/279 (43%), Gaps = 20/279 (7%)
Query: 5 KYPIGAEHYTLYEEVGQGVSASVHRALCIPF-----NEIVAVKILDFERDNSDLSNISRE 59
++ + E T+ E+GQG V+ + VA+K ++ + E
Sbjct: 13 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 72
Query: 60 AQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIA----- 114
A M + +V++ V+M M+ G L++ P+ V+A
Sbjct: 73 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 132
Query: 115 ---TILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMR 171
+ E+ G+ YL+ + +HRD+ + N ++ +K+GDFG++ ++++ D R
Sbjct: 133 KMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET-DYYRKG 191
Query: 172 NTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAH-GHAPFSKYPPMKVLLMTLQN 230
+ WM+PE ++ + +D+WSFG+ E+A P+ +VL ++
Sbjct: 192 GKGLLPVRWMSPESLKD-GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEG 250
Query: 231 APPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLL 269
GL + D F +++ C +P RPS +++
Sbjct: 251 ---GLLDKPDNCPDMLF-ELMRMCWQYNPKMRPSFLEII 285
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 83/198 (41%), Gaps = 17/198 (8%)
Query: 19 VGQGVSASVHRALCIPFNEIVAVKILDFERDN-SDLSNISREAQTMILVDHPNVLKSHCS 77
+G G V A + VA+K L N + RE M V+H N++
Sbjct: 25 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 84
Query: 78 FVSDHNL------WVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHG 131
F L ++VM M L + ++ +L ++L G+ +LH G
Sbjct: 85 FTPQKTLEEFQDVYLVMELMDAN-----LXQVIQMELDHERMSYLLYQMLXGIKHLHSAG 139
Query: 132 HIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHG 191
IHRD+K NI++ +K+ DFG++ + M +V T + APEV+ + G
Sbjct: 140 IIHRDLKPSNIVVKSDXTLKILDFGLAR----TAGTSFMMTPYVVTRYYRAPEVILGM-G 194
Query: 192 YDFKADIWSFGITALELA 209
Y DIWS G E+
Sbjct: 195 YKENVDIWSVGCIMGEMV 212
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 93/214 (43%), Gaps = 23/214 (10%)
Query: 13 YTLYEEVGQGVSASVHRALCIPFNEIVAV-KILDFERDNSDLSNISREAQTMILVDHPNV 71
YT + +G G V++A E+VA+ K+L +R +RE Q M +DH N+
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK------NRELQIMRKLDHCNI 154
Query: 72 LKSHCSFVSDH--------NLWV-VMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLK 122
++ F S NL + +P H +A + + + ++ +
Sbjct: 155 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK--QTLPVIYVKLYMYQLFR 212
Query: 123 GLDYLHHHGHIHRDVKSGNILIDVRGAI-KLGDFGVSACLFDSGDRQRMRNTFVGTPCWM 181
L Y+H G HRD+K N+L+D A+ KL DFG + L R +++ + +
Sbjct: 213 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV----RGEPNVSYICSRYYR 268
Query: 182 APEVMEQLHGYDFKADIWSFGITALELAHGHAPF 215
APE++ Y D+WS G EL G F
Sbjct: 269 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 302
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 96/206 (46%), Gaps = 12/206 (5%)
Query: 13 YTLYEEVGQGVSASVHRALCIPFNEIVAVK--ILDFERDNSDLSNISREAQTMILVDHPN 70
Y ++GQG V +A + VA+K +++ E++ ++ + RE + + L+ H N
Sbjct: 19 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITAL-REIKILQLLKHEN 77
Query: 71 V--LKSHC-SFVSDHNLWVVMPFMSGGSCLHILKAAYPD---GFEEVVIATILREVLKGL 124
V L C + S +N ++ C H L + F I +++ +L GL
Sbjct: 78 VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGL 137
Query: 125 DYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQ--RMRNTFVGTPCWMA 182
Y+H + +HRD+K+ N+LI G +KL DFG++ + + Q R N V T +
Sbjct: 138 YYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-TLWYRP 196
Query: 183 PEVMEQLHGYDFKADIWSFGITALEL 208
PE++ Y D+W G E+
Sbjct: 197 PELLLGERDYGPPIDLWGAGCIMAEM 222
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 93/214 (43%), Gaps = 23/214 (10%)
Query: 13 YTLYEEVGQGVSASVHRALCIPFNEIVAV-KILDFERDNSDLSNISREAQTMILVDHPNV 71
YT + +G G V++A E+VA+ K+L +R +RE Q M +DH N+
Sbjct: 35 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK------NRELQIMRKLDHCNI 88
Query: 72 LKSHCSFVSDH--------NLWV-VMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLK 122
++ F S NL + +P H +A + + + ++ +
Sbjct: 89 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK--QTLPVIYVKLYMYQLFR 146
Query: 123 GLDYLHHHGHIHRDVKSGNILIDVRGAI-KLGDFGVSACLFDSGDRQRMRNTFVGTPCWM 181
L Y+H G HRD+K N+L+D A+ KL DFG + L R +++ + +
Sbjct: 147 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV----RGEPNVSYICSRYYR 202
Query: 182 APEVMEQLHGYDFKADIWSFGITALELAHGHAPF 215
APE++ Y D+WS G EL G F
Sbjct: 203 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 236
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 93/214 (43%), Gaps = 23/214 (10%)
Query: 13 YTLYEEVGQGVSASVHRALCIPFNEIVAV-KILDFERDNSDLSNISREAQTMILVDHPNV 71
YT + +G G V++A E+VA+ K+L +R +RE Q M +DH N+
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK------NRELQIMRKLDHCNI 80
Query: 72 LKSHCSFVSDH--------NLWV-VMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLK 122
++ F S NL + +P H +A + + + ++ +
Sbjct: 81 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK--QTLPVIYVKLYMYQLFR 138
Query: 123 GLDYLHHHGHIHRDVKSGNILIDVRGAI-KLGDFGVSACLFDSGDRQRMRNTFVGTPCWM 181
L Y+H G HRD+K N+L+D A+ KL DFG + L R +++ + +
Sbjct: 139 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV----RGEPNVSYICSRYYR 194
Query: 182 APEVMEQLHGYDFKADIWSFGITALELAHGHAPF 215
APE++ Y D+WS G EL G F
Sbjct: 195 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 228
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 96/206 (46%), Gaps = 12/206 (5%)
Query: 13 YTLYEEVGQGVSASVHRALCIPFNEIVAVK--ILDFERDNSDLSNISREAQTMILVDHPN 70
Y ++GQG V +A + VA+K +++ E++ ++ + RE + + L+ H N
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITAL-REIKILQLLKHEN 78
Query: 71 V--LKSHC-SFVSDHNLWVVMPFMSGGSCLHILKAAYPD---GFEEVVIATILREVLKGL 124
V L C + S +N ++ C H L + F I +++ +L GL
Sbjct: 79 VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGL 138
Query: 125 DYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQ--RMRNTFVGTPCWMA 182
Y+H + +HRD+K+ N+LI G +KL DFG++ + + Q R N V T +
Sbjct: 139 YYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-TLWYRP 197
Query: 183 PEVMEQLHGYDFKADIWSFGITALEL 208
PE++ Y D+W G E+
Sbjct: 198 PELLLGERDYGPPIDLWGAGCIMAEM 223
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 57/117 (48%), Gaps = 6/117 (5%)
Query: 100 LKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVR-GAIKLGDFGVS 158
K YP + I + E+LK LDY H G +HRDVK N++ID ++L D+G+
Sbjct: 116 FKVLYP-TLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGL- 173
Query: 159 ACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPF 215
A + G +R V + + PE++ L YD+ D+WS G + PF
Sbjct: 174 AEFYHPGKEYNVR---VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 227
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 119/279 (42%), Gaps = 20/279 (7%)
Query: 5 KYPIGAEHYTLYEEVGQGVSASVHRALCIPF-----NEIVAVKILDFERDNSDLSNISRE 59
++ + E T+ E+GQG V+ + VA+K ++ + E
Sbjct: 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 78
Query: 60 AQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIA----- 114
A M + +V++ V+M M+ G L++ P V+A
Sbjct: 79 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLS 138
Query: 115 ---TILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMR 171
+ E+ G+ YL+ + +HRD+ + N ++ +K+GDFG++ ++++ D R
Sbjct: 139 KMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET-DYYRKG 197
Query: 172 NTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAH-GHAPFSKYPPMKVLLMTLQN 230
+ WM+PE ++ + +D+WSFG+ E+A P+ +VL ++
Sbjct: 198 GKGLLPVRWMSPESLKD-GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEG 256
Query: 231 APPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLL 269
GL + D F +++ C +P RPS +++
Sbjct: 257 ---GLLDKPDNCPDMLF-ELMRMCWQYNPKMRPSFLEII 291
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 57/117 (48%), Gaps = 6/117 (5%)
Query: 100 LKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVR-GAIKLGDFGVS 158
K YP + I + E+LK LDY H G +HRDVK N++ID ++L D+G+
Sbjct: 115 FKVLYP-TLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGL- 172
Query: 159 ACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPF 215
A + G +R V + + PE++ L YD+ D+WS G + PF
Sbjct: 173 AEFYHPGKEYNVR---VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 226
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 57/117 (48%), Gaps = 6/117 (5%)
Query: 100 LKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVR-GAIKLGDFGVS 158
K YP + I + E+LK LDY H G +HRDVK N++ID ++L D+G+
Sbjct: 116 FKVLYP-TLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGL- 173
Query: 159 ACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPF 215
A + G +R V + + PE++ L YD+ D+WS G + PF
Sbjct: 174 AEFYHPGKEYNVR---VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 227
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 78/165 (47%), Gaps = 16/165 (9%)
Query: 58 REAQTMILVDHPNVLKSHCSFVS--DHNLWVVMPFMSGGSCLHILKA-------AYPDGF 108
RE + + HPNV+ F+S D +W++ + + HI+K P
Sbjct: 67 REIALLRELKHPNVISLQKVFLSHADRKVWLLFDY-AEHDLWHIIKFHRASKANKKPVQL 125
Query: 109 EEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILI----DVRGAIKLGDFGVSACLFDS 164
++ ++L ++L G+ YLH + +HRD+K NIL+ RG +K+ D G A LF+S
Sbjct: 126 PRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGF-ARLFNS 184
Query: 165 GDRQRMR-NTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALEL 208
+ + V T + APE++ Y DIW+ G EL
Sbjct: 185 PLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAEL 229
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 57/117 (48%), Gaps = 6/117 (5%)
Query: 100 LKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVR-GAIKLGDFGVS 158
K YP + I + E+LK LDY H G +HRDVK N++ID ++L D+G+
Sbjct: 115 FKVLYP-TLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGL- 172
Query: 159 ACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPF 215
A + G +R V + + PE++ L YD+ D+WS G + PF
Sbjct: 173 AEFYHPGKEYNVR---VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 226
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 57/117 (48%), Gaps = 6/117 (5%)
Query: 100 LKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVR-GAIKLGDFGVS 158
K YP + I + E+LK LDY H G +HRDVK N++ID ++L D+G+
Sbjct: 117 FKVLYP-TLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGL- 174
Query: 159 ACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPF 215
A + G +R V + + PE++ L YD+ D+WS G + PF
Sbjct: 175 AEFYHPGKEYNVR---VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 228
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 57/117 (48%), Gaps = 6/117 (5%)
Query: 100 LKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVR-GAIKLGDFGVS 158
K YP + I + E+LK LDY H G +HRDVK N++ID ++L D+G+
Sbjct: 115 FKVLYP-TLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGL- 172
Query: 159 ACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPF 215
A + G +R V + + PE++ L YD+ D+WS G + PF
Sbjct: 173 AEFYHPGKEYNVR---VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 226
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 120/279 (43%), Gaps = 20/279 (7%)
Query: 5 KYPIGAEHYTLYEEVGQGVSASVHRALCIPF-----NEIVAVKILDFERDNSDLSNISRE 59
++ + E T+ E+GQG V+ + VA+K ++ + E
Sbjct: 41 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 100
Query: 60 AQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIA----- 114
A M + +V++ V+M M+ G L++ P+ V+A
Sbjct: 101 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 160
Query: 115 ---TILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMR 171
+ E+ G+ YL+ + +HRD+ + N ++ +K+GDFG++ ++++ D R
Sbjct: 161 KMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET-DYYRKG 219
Query: 172 NTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAH-GHAPFSKYPPMKVLLMTLQN 230
+ WM+PE ++ + +D+WSFG+ E+A P+ +VL ++
Sbjct: 220 GKGLLPVRWMSPESLKD-GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEG 278
Query: 231 APPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLL 269
GL + D F +++ C +P RPS +++
Sbjct: 279 ---GLLDKPDNCPDMLF-ELMRMCWQYNPKMRPSFLEII 313
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 57/117 (48%), Gaps = 6/117 (5%)
Query: 100 LKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVR-GAIKLGDFGVS 158
K YP + I + E+LK LDY H G +HRDVK N++ID ++L D+G+
Sbjct: 115 FKVLYP-TLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGL- 172
Query: 159 ACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPF 215
A + G +R V + + PE++ L YD+ D+WS G + PF
Sbjct: 173 AEFYHPGKEYNVR---VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 226
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 57/117 (48%), Gaps = 6/117 (5%)
Query: 100 LKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVR-GAIKLGDFGVS 158
K YP + I + E+LK LDY H G +HRDVK N++ID ++L D+G+
Sbjct: 115 FKVLYP-TLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGL- 172
Query: 159 ACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPF 215
A + G +R V + + PE++ L YD+ D+WS G + PF
Sbjct: 173 AEFYHPGKEYNVR---VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 226
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 93/214 (43%), Gaps = 23/214 (10%)
Query: 13 YTLYEEVGQGVSASVHRALCIPFNEIVAV-KILDFERDNSDLSNISREAQTMILVDHPNV 71
YT + +G G V++A E+VA+ K+L +R +RE Q M +DH N+
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK------NRELQIMRKLDHCNI 75
Query: 72 LKSHCSFVSDH--------NLWV-VMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLK 122
++ F S NL + +P H +A + + + ++ +
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK--QTLPVIYVKLYMYQLFR 133
Query: 123 GLDYLHHHGHIHRDVKSGNILIDVRGAI-KLGDFGVSACLFDSGDRQRMRNTFVGTPCWM 181
L Y+H G HRD+K N+L+D A+ KL DFG + L R +++ + +
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV----RGEPNVSYICSRYYR 189
Query: 182 APEVMEQLHGYDFKADIWSFGITALELAHGHAPF 215
APE++ Y D+WS G EL G F
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 57/117 (48%), Gaps = 6/117 (5%)
Query: 100 LKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVR-GAIKLGDFGVS 158
K YP + I + E+LK LDY H G +HRDVK N++ID ++L D+G+
Sbjct: 115 FKVLYP-TLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGL- 172
Query: 159 ACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPF 215
A + G +R V + + PE++ L YD+ D+WS G + PF
Sbjct: 173 AEFYHPGKEYNVR---VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 226
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/279 (20%), Positives = 118/279 (42%), Gaps = 20/279 (7%)
Query: 5 KYPIGAEHYTLYEEVGQGVSASVHRALCIPF-----NEIVAVKILDFERDNSDLSNISRE 59
++ + E T+ E+GQG V+ + VA+K ++ + E
Sbjct: 4 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 63
Query: 60 AQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIA----- 114
A M + +V++ V+M M+ G L++ P+ V+A
Sbjct: 64 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 123
Query: 115 ---TILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMR 171
+ E+ G+ YL+ + +HRD+ + N ++ +K+GDFG++ + ++ D R
Sbjct: 124 KMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXET-DXXRKG 182
Query: 172 NTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAH-GHAPFSKYPPMKVLLMTLQN 230
+ WM+PE ++ + +D+WSFG+ E+A P+ +VL ++
Sbjct: 183 GKGLLPVRWMSPESLKD-GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEG 241
Query: 231 APPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLL 269
GL ++ +++ C +P RPS +++
Sbjct: 242 ---GL-LDKPDNCPDMLLELMRMCWQYNPKMRPSFLEII 276
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 89/207 (42%), Gaps = 15/207 (7%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNE----IVAVKIL-----DFERDNSDLSNISREAQ 61
H ++G+G SV P + +VAVK L D +RD I +
Sbjct: 10 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALH 69
Query: 62 TMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVL 121
+ +V + V +L +VM ++ G CL + + + ++
Sbjct: 70 SDFIVKYRGVSYG----PGRQSLRLVMEYLPSG-CLRDFLQRHRARLDASRLLLYSSQIC 124
Query: 122 KGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWM 181
KG++YL +HRD+ + NIL++ +K+ DFG++ L D +R W
Sbjct: 125 KGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWY 184
Query: 182 APEVMEQLHGYDFKADIWSFGITALEL 208
APE + + + ++D+WSFG+ EL
Sbjct: 185 APESLSD-NIFSRQSDVWSFGVVLYEL 210
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 119/279 (42%), Gaps = 20/279 (7%)
Query: 5 KYPIGAEHYTLYEEVGQGVSASVHRALCIPF-----NEIVAVKILDFERDNSDLSNISRE 59
++ + E T+ E+GQG V+ + VA+K ++ + E
Sbjct: 9 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 68
Query: 60 AQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIA----- 114
A M + +V++ V+M M+ G L++ P V+A
Sbjct: 69 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLS 128
Query: 115 ---TILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMR 171
+ E+ G+ YL+ + +HRD+ + N ++ +K+GDFG++ ++++ D R
Sbjct: 129 KMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET-DYYRKG 187
Query: 172 NTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAH-GHAPFSKYPPMKVLLMTLQN 230
+ WM+PE ++ + +D+WSFG+ E+A P+ +VL ++
Sbjct: 188 GKGLLPVRWMSPESLKD-GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEG 246
Query: 231 APPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLL 269
GL + D F +++ C +P RPS +++
Sbjct: 247 ---GLLDKPDNCPDMLF-ELMRMCWQYNPKMRPSFLEII 281
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 109/244 (44%), Gaps = 28/244 (11%)
Query: 52 DLSNISREAQT-MILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYP--DGF 108
D N RE +L H +V++ ++ D ++ + + +GGS + Y F
Sbjct: 49 DEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYF 108
Query: 109 EEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLG--------DFGVSAC 160
+E + +L +V +GL Y+H +H D+K NI I R +I D+ +
Sbjct: 109 KEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFIS-RTSIPNAASEEGDEDDWASNKV 167
Query: 161 LFDSGDR---QRMRNTFV--GTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPF 215
+F GD R+ + V G ++A EV+++ + + KADI++ +T + A G P
Sbjct: 168 MFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVXAA-GAEPL 226
Query: 216 SKYPPM--KVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSF 273
+ ++ L P L S+ F +++ + DP +RPSA L+KHS
Sbjct: 227 PRNGDQWHEIRQGRLPRIPQVL--------SQEFTELLKVMIHPDPERRPSAMALVKHSV 278
Query: 274 FKQA 277
A
Sbjct: 279 LLSA 282
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 6/153 (3%)
Query: 119 EVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTP 178
+V KG+ +L IHRD+ + NIL+ K+ DFG++ + + + N +
Sbjct: 169 QVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVK 228
Query: 179 CWMAPEVMEQLHGYDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLDY 237
WMAPE + Y F++D+WS+GI EL + G +P YP M V + G
Sbjct: 229 -WMAPESIFNCV-YTFESDVWSYGIFLWELFSLGSSP---YPGMPVDSKFYKMIKEGFRM 283
Query: 238 ERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLK 270
++ +C DP KRP+ K++++
Sbjct: 284 LSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 316
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 89/207 (42%), Gaps = 15/207 (7%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNE----IVAVKIL-----DFERDNSDLSNISREAQ 61
H ++G+G SV P + +VAVK L D +RD I +
Sbjct: 11 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALH 70
Query: 62 TMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVL 121
+ +V + V +L +VM ++ G CL + + + ++
Sbjct: 71 SDFIVKYRGVSYG----PGRQSLRLVMEYLPSG-CLRDFLQRHRARLDASRLLLYSSQIC 125
Query: 122 KGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWM 181
KG++YL +HRD+ + NIL++ +K+ DFG++ L D +R W
Sbjct: 126 KGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWY 185
Query: 182 APEVMEQLHGYDFKADIWSFGITALEL 208
APE + + + ++D+WSFG+ EL
Sbjct: 186 APESLSD-NIFSRQSDVWSFGVVLYEL 211
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 99/271 (36%), Gaps = 76/271 (28%)
Query: 72 LKSHCSFVS-DHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHH 130
+K H F+ DH + P G S I+ +GF I E+LK L+YL
Sbjct: 99 VKYHGKFMYYDHMCLIFEPL--GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKM 156
Query: 131 GHIHRDVKSGNILID----------VR---------------GAIKLGDFGVSACLFDSG 165
H D+K NIL+D VR IKL DFG +
Sbjct: 157 SLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATF----- 211
Query: 166 DRQRMRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLL 225
+ + + T + APEV+ L G+D +D+WSFG EL G F + M+ L
Sbjct: 212 -KSDYHGSIINTRQYRAPEVILNL-GWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLA 269
Query: 226 M---TLQNAPPGLDYERDR------------------------------------KFSKS 246
M +Q P + YE + K K
Sbjct: 270 MMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKH 329
Query: 247 --FKQMIASCLVKDPSKRPSAKKLLKHSFFK 275
F + S L DP+ RPS +LLKH F +
Sbjct: 330 ELFCDFLYSILQIDPTLRPSPAELLKHKFLE 360
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 119/279 (42%), Gaps = 20/279 (7%)
Query: 5 KYPIGAEHYTLYEEVGQGVSASVHRALCIPF-----NEIVAVKILDFERDNSDLSNISRE 59
++ + E T+ E+GQG V+ + VA+K ++ + E
Sbjct: 13 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 72
Query: 60 AQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIA----- 114
A M + +V++ V+M M+ G L++ P+ V+A
Sbjct: 73 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 132
Query: 115 ---TILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMR 171
+ E+ G+ YL+ + +HRD+ + N ++ +K+GDFG++ + ++ D R
Sbjct: 133 KMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXET-DXXRKG 191
Query: 172 NTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAH-GHAPFSKYPPMKVLLMTLQN 230
+ WM+PE ++ + +D+WSFG+ E+A P+ +VL ++
Sbjct: 192 GKGLLPVRWMSPESLKD-GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEG 250
Query: 231 APPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLL 269
GL + D F +++ C +P RPS +++
Sbjct: 251 ---GLLDKPDNCPDMLF-ELMRMCWQYNPKMRPSFLEII 285
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 74/179 (41%), Gaps = 12/179 (6%)
Query: 119 EVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTP 178
+V +G+DYL IHR++ + NIL+ K+ DFG+S G ++ T P
Sbjct: 147 DVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLS-----RGQEVYVKKTMGRLP 201
Query: 179 C-WMAPEVMEQLHGYDFKADIWSFGITALELAH-GHAPFSKYPPMKVLLMTLQNAPPGLD 236
WMA E + Y +D+WS+G+ E+ G P+ ++ + P G
Sbjct: 202 VRWMAIESL-NYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAEL----YEKLPQGYR 256
Query: 237 YERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSFFKQARSNEYIARTLLEGLPALG 295
E+ ++ C + P +RPS ++L Y+ TL E G
Sbjct: 257 LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKTYVNTTLYEKFTYAG 315
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 57/117 (48%), Gaps = 6/117 (5%)
Query: 100 LKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVR-GAIKLGDFGVS 158
K YP + I + E+LK LDY H G +HRDVK N++ID ++L D+G+
Sbjct: 136 FKVLYP-TLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGL- 193
Query: 159 ACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPF 215
A + G +R V + + PE++ L YD+ D+WS G + PF
Sbjct: 194 AEFYHPGKEYNVR---VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 247
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 109/244 (44%), Gaps = 28/244 (11%)
Query: 52 DLSNISREAQT-MILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYP--DGF 108
D N RE +L H +V++ ++ D ++ + + +GGS + Y F
Sbjct: 51 DEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYF 110
Query: 109 EEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLG--------DFGVSAC 160
+E + +L +V +GL Y+H +H D+K NI I R +I D+ +
Sbjct: 111 KEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFIS-RTSIPNAASEEGDEDDWASNKV 169
Query: 161 LFDSGDR---QRMRNTFV--GTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPF 215
+F GD R+ + V G ++A EV+++ + + KADI++ +T + A G P
Sbjct: 170 MFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVV-CAAGAEPL 228
Query: 216 SKYPPM--KVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSF 273
+ ++ L P L S+ F +++ + DP +RPSA L+KHS
Sbjct: 229 PRNGDQWHEIRQGRLPRIPQVL--------SQEFTELLKVMIHPDPERRPSAMALVKHSV 280
Query: 274 FKQA 277
A
Sbjct: 281 LLSA 284
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 84/204 (41%), Gaps = 17/204 (8%)
Query: 19 VGQGVSASVHRALCIPFNEIVAVKILDFERDN-SDLSNISREAQTMILVDHPNVLKSHCS 77
+G G V A + VA+K L N + RE M V+H N++
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNV 91
Query: 78 FVSDHNL------WVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHG 131
F L ++VM M L + ++ +L ++L G+ +LH G
Sbjct: 92 FTPQKTLEEFQDVYLVMELMDAN-----LXQVIQMELDHERMSYLLYQMLCGIKHLHSAG 146
Query: 132 HIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHG 191
IHRD+K NI++ +K+ DFG++ + M +V T + APEV+ + G
Sbjct: 147 IIHRDLKPSNIVVKSDXTLKILDFGLAR----TAGTSFMMTPYVVTRYYRAPEVILGM-G 201
Query: 192 YDFKADIWSFGITALELAHGHAPF 215
Y DIWS G E+ F
Sbjct: 202 YKENVDIWSVGCIMGEMVRHKILF 225
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 6/153 (3%)
Query: 119 EVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTP 178
+V KG+ +L IHRD+ + NIL+ K+ DFG++ + + + N +
Sbjct: 171 QVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVK 230
Query: 179 CWMAPEVMEQLHGYDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLDY 237
WMAPE + Y F++D+WS+GI EL + G +P YP M V + G
Sbjct: 231 -WMAPESIFNCV-YTFESDVWSYGIFLWELFSLGSSP---YPGMPVDSKFYKMIKEGFRM 285
Query: 238 ERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLK 270
++ +C DP KRP+ K++++
Sbjct: 286 LSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 318
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 89/207 (42%), Gaps = 15/207 (7%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNE----IVAVKIL-----DFERDNSDLSNISREAQ 61
H ++G+G SV P + +VAVK L D +RD I +
Sbjct: 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALH 82
Query: 62 TMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVL 121
+ +V + V +L +VM ++ G CL + + + ++
Sbjct: 83 SDFIVKYRGVSYG----PGRQSLRLVMEYLPSG-CLRDFLQRHRARLDASRLLLYSSQIC 137
Query: 122 KGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWM 181
KG++YL +HRD+ + NIL++ +K+ DFG++ L D +R W
Sbjct: 138 KGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWY 197
Query: 182 APEVMEQLHGYDFKADIWSFGITALEL 208
APE + + + ++D+WSFG+ EL
Sbjct: 198 APESLSD-NIFSRQSDVWSFGVVLYEL 223
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 110/257 (42%), Gaps = 39/257 (15%)
Query: 36 NEIVAVKILDFERDNSDLSNISREAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGS 95
+ VA+K L + + EA + HPNV+ D L ++ + S G
Sbjct: 56 TQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGD 115
Query: 96 CLH---ILKAAYPD------------GFEEVVIATILREVLKGLDYLHHHGHIHRDVKSG 140
LH ++++ + D E ++ ++ G++YL H +H+D+ +
Sbjct: 116 -LHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATR 174
Query: 141 NILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHG-YDFKADIW 199
N+L+ + +K+ D G+ ++ + + + N+ + WMAPE + ++G + +DIW
Sbjct: 175 NVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIR-WMAPEAI--MYGKFSIDSDIW 231
Query: 200 SFGITALE-LAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKF-------SKSFKQMI 251
S+G+ E ++G P+ Y V+ M R+R+ ++
Sbjct: 232 SYGVVLWEVFSYGLQPYCGYSNQDVVEMI-----------RNRQVLPCPDDCPAWVYALM 280
Query: 252 ASCLVKDPSKRPSAKKL 268
C + PS+RP K +
Sbjct: 281 IECWNEFPSRRPRFKDI 297
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 6/153 (3%)
Query: 119 EVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTP 178
+V KG+ +L IHRD+ + NIL+ K+ DFG++ + + + N +
Sbjct: 176 QVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARLPVK 235
Query: 179 CWMAPEVMEQLHGYDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLDY 237
WMAPE + Y F++D+WS+GI EL + G +P YP M V + G
Sbjct: 236 -WMAPESIFNC-VYTFESDVWSYGIFLWELFSLGSSP---YPGMPVDSKFYKMIKEGFRM 290
Query: 238 ERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLK 270
++ +C DP KRP+ K++++
Sbjct: 291 LSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 323
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 84/186 (45%), Gaps = 8/186 (4%)
Query: 86 VVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILID 145
+ M + GGS ++K E L + L+GL+YLH +H DVK+ N+L+
Sbjct: 162 IFMELLEGGSLGQLVKEQ--GCLPEDRALYYLGQALEGLEYLHSRRILHGDVKADNVLLS 219
Query: 146 VRGA-IKLGDFGVSACLFDSG-DRQRMRNTFV-GTPCWMAPEVMEQLHGYDFKADIWSFG 202
G+ L DFG + CL G + + ++ GT MAPEV+ D K D+WS
Sbjct: 220 SDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLG-RSCDAKVDVWSSC 278
Query: 203 ITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKR 262
L + +G P++++ + L PP E + Q I L K+P R
Sbjct: 279 CMMLHMLNGCHPWTQFFRGPLCLKIASEPPP--VREIPPSCAPLTAQAIQEGLRKEPIHR 336
Query: 263 PSAKKL 268
SA +L
Sbjct: 337 VSAAEL 342
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 6/153 (3%)
Query: 119 EVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTP 178
+V KG+ +L IHRD+ + NIL+ K+ DFG++ + + + N +
Sbjct: 176 QVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVK 235
Query: 179 CWMAPEVMEQLHGYDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLDY 237
WMAPE + Y F++D+WS+GI EL + G +P YP M V + G
Sbjct: 236 -WMAPESIFNCV-YTFESDVWSYGIFLWELFSLGSSP---YPGMPVDSKFYKMIKEGFRM 290
Query: 238 ERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLK 270
++ +C DP KRP+ K++++
Sbjct: 291 LSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 323
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 6/153 (3%)
Query: 119 EVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTP 178
+V KG+ +L IHRD+ + NIL+ K+ DFG++ + + + N +
Sbjct: 153 QVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVK 212
Query: 179 CWMAPEVMEQLHGYDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLDY 237
WMAPE + Y F++D+WS+GI EL + G +P YP M V + G
Sbjct: 213 -WMAPESIFNCV-YTFESDVWSYGIFLWELFSLGSSP---YPGMPVDSKFYKMIKEGFRM 267
Query: 238 ERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLK 270
++ +C DP KRP+ K++++
Sbjct: 268 LSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 300
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 84/186 (45%), Gaps = 8/186 (4%)
Query: 86 VVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILID 145
+ M + GGS ++K E L + L+GL+YLH +H DVK+ N+L+
Sbjct: 143 IFMELLEGGSLGQLVKEQ--GCLPEDRALYYLGQALEGLEYLHSRRILHGDVKADNVLLS 200
Query: 146 VRGA-IKLGDFGVSACLFDSG-DRQRMRNTFV-GTPCWMAPEVMEQLHGYDFKADIWSFG 202
G+ L DFG + CL G + + ++ GT MAPEV+ D K D+WS
Sbjct: 201 SDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLG-RSCDAKVDVWSSC 259
Query: 203 ITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKR 262
L + +G P++++ + L PP E + Q I L K+P R
Sbjct: 260 CMMLHMLNGCHPWTQFFRGPLCLKIASEPPP--VREIPPSCAPLTAQAIQEGLRKEPIHR 317
Query: 263 PSAKKL 268
SA +L
Sbjct: 318 VSAAEL 323
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 109/244 (44%), Gaps = 28/244 (11%)
Query: 52 DLSNISREAQT-MILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYP--DGF 108
D N RE +L H +V++ ++ D ++ + + +GGS + Y F
Sbjct: 51 DEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYF 110
Query: 109 EEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLG--------DFGVSAC 160
+E + +L +V +GL Y+H +H D+K NI I R +I D+ +
Sbjct: 111 KEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFIS-RTSIPNAASEEGDEDDWASNKV 169
Query: 161 LFDSGDR---QRMRNTFV--GTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPF 215
+F GD R+ + V G ++A EV+++ + + KADI++ +T + A G P
Sbjct: 170 MFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVV-CAAGAEPL 228
Query: 216 SKYPPM--KVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSF 273
+ ++ L P L S+ F +++ + DP +RPSA L+KHS
Sbjct: 229 PRNGDQWHEIRQGRLPRIPQVL--------SQEFTELLKVMIHPDPERRPSAMALVKHSV 280
Query: 274 FKQA 277
A
Sbjct: 281 LLSA 284
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 88/207 (42%), Gaps = 15/207 (7%)
Query: 11 EHYTLYEEVGQGVSASVHRALCIPFNE----IVAVKIL-----DFERDNSDLSNISREAQ 61
H ++G+G SV P + +VAVK L D +RD I +
Sbjct: 7 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALH 66
Query: 62 TMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVL 121
+ +V + V L +VM ++ G CL + + + ++
Sbjct: 67 SDFIVKYRGVSYGP----GRPELRLVMEYLPSG-CLRDFLQRHRARLDASRLLLYSSQIC 121
Query: 122 KGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWM 181
KG++YL +HRD+ + NIL++ +K+ DFG++ L D +R W
Sbjct: 122 KGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWY 181
Query: 182 APEVMEQLHGYDFKADIWSFGITALEL 208
APE + + + ++D+WSFG+ EL
Sbjct: 182 APESLSD-NIFSRQSDVWSFGVVLYEL 207
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 109/244 (44%), Gaps = 28/244 (11%)
Query: 52 DLSNISREAQT-MILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYP--DGF 108
D N RE +L H +V++ ++ D ++ + + +GGS + Y F
Sbjct: 53 DEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYF 112
Query: 109 EEVVIATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLG--------DFGVSAC 160
+E + +L +V +GL Y+H +H D+K NI I R +I D+ +
Sbjct: 113 KEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFIS-RTSIPNAASEEGDEDDWASNKV 171
Query: 161 LFDSGDR---QRMRNTFV--GTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPF 215
+F GD R+ + V G ++A EV+++ + + KADI++ +T + A G P
Sbjct: 172 MFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVV-CAAGAEPL 230
Query: 216 SKYPPM--KVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLLKHSF 273
+ ++ L P L S+ F +++ + DP +RPSA L+KHS
Sbjct: 231 PRNGDQWHEIRQGRLPRIPQVL--------SQEFTELLKVMIHPDPERRPSAMALVKHSV 282
Query: 274 FKQA 277
A
Sbjct: 283 LLSA 286
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 83/198 (41%), Gaps = 17/198 (8%)
Query: 19 VGQGVSASVHRALCIPFNEIVAVKILDFERDN-SDLSNISREAQTMILVDHPNVLKSHCS 77
+G G V A VA+K L N + RE M V+H N++
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 78 FVSDHNL------WVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHG 131
F +L ++VM M C I + ++ +L ++L G+ +LH G
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDANLCQVIQME-----LDHERMSYLLYQMLCGIKHLHSAG 146
Query: 132 HIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHG 191
IHRD+K NI++ +K+ DFG++ + M V T + APEV+ + G
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLAR----TAGTSFMMEPEVVTRYYRAPEVILGM-G 201
Query: 192 YDFKADIWSFGITALELA 209
Y DIWS G E+
Sbjct: 202 YKENVDIWSVGCIMGEMV 219
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/279 (20%), Positives = 118/279 (42%), Gaps = 20/279 (7%)
Query: 5 KYPIGAEHYTLYEEVGQGVSASVHRALCIPF-----NEIVAVKILDFERDNSDLSNISRE 59
++ + E T+ E+GQG V+ + VA+K ++ + E
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 65
Query: 60 AQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIA----- 114
A M + +V++ V+M M+ G L++ P+ V+A
Sbjct: 66 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 125
Query: 115 ---TILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMR 171
+ E+ G+ YL+ + +HRD+ + N + +K+GDFG++ ++++ D R
Sbjct: 126 KMIQMAGEIADGMAYLNANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYET-DYYRKG 184
Query: 172 NTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAH-GHAPFSKYPPMKVLLMTLQN 230
+ WM+PE ++ + +D+WSFG+ E+A P+ +VL ++
Sbjct: 185 GKGLLPVRWMSPESLKD-GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEG 243
Query: 231 APPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLL 269
GL ++ +++ C +P RPS +++
Sbjct: 244 ---GL-LDKPDNCPDMLLELMRMCWQYNPKMRPSFLEII 278
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 92/214 (42%), Gaps = 23/214 (10%)
Query: 13 YTLYEEVGQGVSASVHRALCIPFNEIVAV-KILDFERDNSDLSNISREAQTMILVDHPNV 71
YT + +G G V++A E+VA+ K+L +R +RE Q M +DH N+
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK------NRELQIMRKLDHCNI 109
Query: 72 LKSHCSFVSDH--------NLWV-VMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLK 122
++ F S NL + +P H +A + + + ++ +
Sbjct: 110 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK--QTLPVIYVKLYMYQLFR 167
Query: 123 GLDYLHHHGHIHRDVKSGNILIDVRGAI-KLGDFGVSACLFDSGDRQRMRNTFVGTPCWM 181
L Y+H G HRD+K N+L+D A+ KL DFG + L R + + + +
Sbjct: 168 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV----RGEPNVSXICSRYYR 223
Query: 182 APEVMEQLHGYDFKADIWSFGITALELAHGHAPF 215
APE++ Y D+WS G EL G F
Sbjct: 224 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 257
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 112/258 (43%), Gaps = 41/258 (15%)
Query: 36 NEIVAVKILDFERDNSDLSNISREAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGS 95
+ VA+K L + + EA + HPNV+ D L ++ + S G
Sbjct: 39 TQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGD 98
Query: 96 CLH---ILKAAYPD------------GFEEVVIATILREVLKGLDYLHHHGHIHRDVKSG 140
LH ++++ + D E ++ ++ G++YL H +H+D+ +
Sbjct: 99 -LHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATR 157
Query: 141 NILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHG-YDFKADIW 199
N+L+ + +K+ D G+ ++ + + + N+ + WMAPE + ++G + +DIW
Sbjct: 158 NVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIR-WMAPEAI--MYGKFSIDSDIW 214
Query: 200 SFGITALE-LAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKF--------SKSFKQM 250
S+G+ E ++G P+ Y V+ M R+R+ + + M
Sbjct: 215 SYGVVLWEVFSYGLQPYCGYSNQDVVEMI-----------RNRQVLPCPDDCPAWVYALM 263
Query: 251 IASCLVKDPSKRPSAKKL 268
I C + PS+RP K +
Sbjct: 264 I-ECWNEFPSRRPRFKDI 280
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 92/214 (42%), Gaps = 23/214 (10%)
Query: 13 YTLYEEVGQGVSASVHRALCIPFNEIVAV-KILDFERDNSDLSNISREAQTMILVDHPNV 71
YT + +G G V++A E+VA+ K+L +R +RE Q M +DH N+
Sbjct: 41 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK------NRELQIMRKLDHCNI 94
Query: 72 LKSHCSFVSDH--------NLWV-VMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLK 122
++ F S NL + +P H +A + + + ++ +
Sbjct: 95 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK--QTLPVIYVKLYMYQLFR 152
Query: 123 GLDYLHHHGHIHRDVKSGNILIDVRGAI-KLGDFGVSACLFDSGDRQRMRNTFVGTPCWM 181
L Y+H G HRD+K N+L+D A+ KL DFG + L R + + + +
Sbjct: 153 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV----RGEPNVSXICSRYYR 208
Query: 182 APEVMEQLHGYDFKADIWSFGITALELAHGHAPF 215
APE++ Y D+WS G EL G F
Sbjct: 209 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 242
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 92/214 (42%), Gaps = 23/214 (10%)
Query: 13 YTLYEEVGQGVSASVHRALCIPFNEIVAV-KILDFERDNSDLSNISREAQTMILVDHPNV 71
YT + +G G V++A E+VA+ K+L +R +RE Q M +DH N+
Sbjct: 30 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK------NRELQIMRKLDHCNI 83
Query: 72 LKSHCSFVSDH--------NLWV-VMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLK 122
++ F S NL + +P H +A + + + ++ +
Sbjct: 84 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK--QTLPVIYVKLYMYQLFR 141
Query: 123 GLDYLHHHGHIHRDVKSGNILIDVRGAI-KLGDFGVSACLFDSGDRQRMRNTFVGTPCWM 181
L Y+H G HRD+K N+L+D A+ KL DFG + L R + + + +
Sbjct: 142 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV----RGEPNVSXICSRYYR 197
Query: 182 APEVMEQLHGYDFKADIWSFGITALELAHGHAPF 215
APE++ Y D+WS G EL G F
Sbjct: 198 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 231
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 92/214 (42%), Gaps = 23/214 (10%)
Query: 13 YTLYEEVGQGVSASVHRALCIPFNEIVAV-KILDFERDNSDLSNISREAQTMILVDHPNV 71
YT + +G G V++A E+VA+ K+L +R +RE Q M +DH N+
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK------NRELQIMRKLDHCNI 87
Query: 72 LKSHCSFVSDH--------NLWV-VMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLK 122
++ F S NL + +P H +A + + + ++ +
Sbjct: 88 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK--QTLPVIYVKLYMYQLFR 145
Query: 123 GLDYLHHHGHIHRDVKSGNILIDVRGAI-KLGDFGVSACLFDSGDRQRMRNTFVGTPCWM 181
L Y+H G HRD+K N+L+D A+ KL DFG + L R + + + +
Sbjct: 146 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV----RGEPNVSXICSRYYR 201
Query: 182 APEVMEQLHGYDFKADIWSFGITALELAHGHAPF 215
APE++ Y D+WS G EL G F
Sbjct: 202 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 235
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 92/214 (42%), Gaps = 23/214 (10%)
Query: 13 YTLYEEVGQGVSASVHRALCIPFNEIVAV-KILDFERDNSDLSNISREAQTMILVDHPNV 71
YT + +G G V++A E+VA+ K+L +R +RE Q M +DH N+
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK------NRELQIMRKLDHCNI 87
Query: 72 LKSHCSFVSDH--------NLWV-VMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLK 122
++ F S NL + +P H +A + + + ++ +
Sbjct: 88 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK--QTLPVIYVKLYMYQLFR 145
Query: 123 GLDYLHHHGHIHRDVKSGNILIDVRGAI-KLGDFGVSACLFDSGDRQRMRNTFVGTPCWM 181
L Y+H G HRD+K N+L+D A+ KL DFG + L R + + + +
Sbjct: 146 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV----RGEPNVSXICSRYYR 201
Query: 182 APEVMEQLHGYDFKADIWSFGITALELAHGHAPF 215
APE++ Y D+WS G EL G F
Sbjct: 202 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 235
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 53/104 (50%), Gaps = 2/104 (1%)
Query: 113 IATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN 172
I ++ +V G+ YL +HRD+ + N+L+ + K+ DFG+S L + + +
Sbjct: 129 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 188
Query: 173 TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALE-LAHGHAPF 215
W APE + + + K+D+WSFG+ E ++G P+
Sbjct: 189 HGKWPVKWYAPECI-NYYKFSSKSDVWSFGVLMWEAFSYGQKPY 231
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 53/104 (50%), Gaps = 2/104 (1%)
Query: 113 IATILREVLKGLDYLHHHGHIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRN 172
I ++ +V G+ YL +HRD+ + N+L+ + K+ DFG+S L + + +
Sbjct: 129 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 188
Query: 173 TFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALE-LAHGHAPF 215
W APE + + + K+D+WSFG+ E ++G P+
Sbjct: 189 HGKWPVKWYAPECI-NYYKFSSKSDVWSFGVLMWEAFSYGQKPY 231
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 52/104 (50%), Gaps = 5/104 (4%)
Query: 113 IATILREVLKGLDYLHHHGHIHRDVKSGNILID-VRGAIKLGDFGVSACLFDSGDRQRMR 171
I + E+LK LDY H G +HRDVK N+LID ++L D+G+ A + G +R
Sbjct: 133 IRFYMYEILKALDYCHSMGIMHRDVKPHNVLIDHEHRKLRLIDWGL-AEFYHPGQEYNVR 191
Query: 172 NTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPF 215
V + + PE++ YD+ D+WS G + PF
Sbjct: 192 ---VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 83/198 (41%), Gaps = 17/198 (8%)
Query: 19 VGQGVSASVHRALCIPFNEIVAVKILDFERDN-SDLSNISREAQTMILVDHPNVLKSHCS 77
+G G V A VA+K L N + RE M V+H N++
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 78 FVSDHNL------WVVMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHHHG 131
F +L ++VM M C I + ++ +L ++L G+ +LH G
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDANLCQVIQME-----LDHERMSYLLYQMLCGIKHLHSAG 146
Query: 132 HIHRDVKSGNILIDVRGAIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLHG 191
IHRD+K NI++ +K+ DFG++ + M V T + APEV+ + G
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLAR----TAGTSFMMEPEVVTRYYRAPEVILGM-G 201
Query: 192 YDFKADIWSFGITALELA 209
Y D+WS G E+
Sbjct: 202 YKENVDLWSVGCIMGEMV 219
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 90/213 (42%), Gaps = 21/213 (9%)
Query: 13 YTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPNVL 72
YT + +G G V++A E+VA+K + N RE Q M +DH N++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV---LQGKAFKN--RELQIMRKLDHCNIV 76
Query: 73 KSHCSFVSDH--------NLWV-VMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKG 123
+ F S NL + +P H +A + + + ++ +
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK--QTLPVIYVKLYMYQLFRS 134
Query: 124 LDYLHHHGHIHRDVKSGNILIDVRGAI-KLGDFGVSACLFDSGDRQRMRNTFVGTPCWMA 182
L Y+H G HRD+K N+L+D A+ KL DFG + L R +++ + + A
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV----RGEPNVSYICSRYYRA 190
Query: 183 PEVMEQLHGYDFKADIWSFGITALELAHGHAPF 215
PE++ Y D+WS G EL G F
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 90/213 (42%), Gaps = 21/213 (9%)
Query: 13 YTLYEEVGQGVSASVHRALCIPFNEIVAVKILDFERDNSDLSNISREAQTMILVDHPNVL 72
YT + +G G V++A E+VA+K + N RE Q M +DH N++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV---LQGKAFKN--RELQIMRKLDHCNIV 76
Query: 73 KSHCSFVSDH--------NLWV-VMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLKG 123
+ F S NL + +P H +A + + + ++ +
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK--QTLPVIYVKLYMYQLFRS 134
Query: 124 LDYLHHHGHIHRDVKSGNILIDVRGAI-KLGDFGVSACLFDSGDRQRMRNTFVGTPCWMA 182
L Y+H G HRD+K N+L+D A+ KL DFG + L R +++ + + A
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV----RGEPNVSYICSRYYRA 190
Query: 183 PEVMEQLHGYDFKADIWSFGITALELAHGHAPF 215
PE++ Y D+WS G EL G F
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 92/214 (42%), Gaps = 23/214 (10%)
Query: 13 YTLYEEVGQGVSASVHRALCIPFNEIVAV-KILDFERDNSDLSNISREAQTMILVDHPNV 71
YT + +G G V++A E+VA+ K+L +R +RE Q M +DH N+
Sbjct: 23 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK------NRELQIMRKLDHCNI 76
Query: 72 LKSHCSFVSDH--------NLWV-VMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLK 122
++ F S NL + +P H +A + + + ++ +
Sbjct: 77 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK--QTLPVIYVKLYMYQLFR 134
Query: 123 GLDYLHHHGHIHRDVKSGNILIDVRGAI-KLGDFGVSACLFDSGDRQRMRNTFVGTPCWM 181
L Y+H G HRD+K N+L+D A+ KL DFG + L R + + + +
Sbjct: 135 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV----RGEPNVSXICSRYYR 190
Query: 182 APEVMEQLHGYDFKADIWSFGITALELAHGHAPF 215
APE++ Y D+WS G EL G F
Sbjct: 191 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 224
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 52/104 (50%), Gaps = 5/104 (4%)
Query: 113 IATILREVLKGLDYLHHHGHIHRDVKSGNILID-VRGAIKLGDFGVSACLFDSGDRQRMR 171
I + E+LK LDY H G +HRDVK N++ID ++L D+G+ A + G +R
Sbjct: 133 IRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGL-AEFYHPGQEYNVR 191
Query: 172 NTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPF 215
V + + PE++ YD+ D+WS G + PF
Sbjct: 192 ---VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 92/214 (42%), Gaps = 23/214 (10%)
Query: 13 YTLYEEVGQGVSASVHRALCIPFNEIVAV-KILDFERDNSDLSNISREAQTMILVDHPNV 71
YT + +G G V++A E+VA+ K+L +R +RE Q M +DH N+
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK------NRELQIMRKLDHCNI 75
Query: 72 LKSHCSFVSDH--------NLWV-VMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLK 122
++ F S NL + +P H +A + + + ++ +
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK--QTLPVIYVKLYMYQLFR 133
Query: 123 GLDYLHHHGHIHRDVKSGNILIDVRGAI-KLGDFGVSACLFDSGDRQRMRNTFVGTPCWM 181
L Y+H G HRD+K N+L+D A+ KL DFG + L R + + + +
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV----RGEPNVSXICSRYYR 189
Query: 182 APEVMEQLHGYDFKADIWSFGITALELAHGHAPF 215
APE++ Y D+WS G EL G F
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 92/214 (42%), Gaps = 23/214 (10%)
Query: 13 YTLYEEVGQGVSASVHRALCIPFNEIVAV-KILDFERDNSDLSNISREAQTMILVDHPNV 71
YT + +G G V++A E+VA+ K+L +R +RE Q M +DH N+
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK------NRELQIMRKLDHCNI 75
Query: 72 LKSHCSFVSDH--------NLWV-VMPFMSGGSCLHILKAAYPDGFEEVVIATILREVLK 122
++ F S NL + +P H +A + + + ++ +
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK--QTLPVIYVKLYMYQLFR 133
Query: 123 GLDYLHHHGHIHRDVKSGNILIDVRGAI-KLGDFGVSACLFDSGDRQRMRNTFVGTPCWM 181
L Y+H G HRD+K N+L+D A+ KL DFG + L R + + + +
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV----RGEPNVSXICSRYYR 189
Query: 182 APEVMEQLHGYDFKADIWSFGITALELAHGHAPF 215
APE++ Y D+WS G EL G F
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.132 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,251,150
Number of Sequences: 62578
Number of extensions: 756107
Number of successful extensions: 5746
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1040
Number of HSP's successfully gapped in prelim test: 81
Number of HSP's that attempted gapping in prelim test: 2466
Number of HSP's gapped (non-prelim): 1264
length of query: 636
length of database: 14,973,337
effective HSP length: 105
effective length of query: 531
effective length of database: 8,402,647
effective search space: 4461805557
effective search space used: 4461805557
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)