BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006667
(636 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q54R62|UCKC_DICDI Uridine-cytidine kinase C OS=Dictyostelium discoideum GN=udkC PE=3
SV=1
Length = 449
Score = 370 bits (949), Expect = e-101, Method: Compositional matrix adjust.
Identities = 185/397 (46%), Positives = 267/397 (67%), Gaps = 34/397 (8%)
Query: 22 QVQLVKKKDSD-RYEIVPIEDTLSFEKG--------------------------PSGAGK 54
+++++ + D D RY I P++DTLSF+KG PSGAGK
Sbjct: 5 EIEVIPRPDKDDRYTIKPLKDTLSFDKGFFLAVRAIQSIRKKSQGSVIVVGIAGPSGAGK 64
Query: 55 TVFTEKVLNFMPSIAVITMDNYNDSSR-IIDGNFDDPRLTDYDTLLENIRGLKEGKAVQV 113
T +K+++ +P +I++DNY DSSR II+ N+DD RL D++ L +NI L K +
Sbjct: 65 TSIAQKIVSVLPKSILISLDNYLDSSRQIIEENYDDYRLVDFELLKKNISDLISNKPTDL 124
Query: 114 PIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSEKLRPLIDLRVSVTGGVHFDLVKRVFR 173
P+YDF S R Y+ ++ P S++++IEGIYAL E++R L+DLRVS++GGVHFDL+KR+FR
Sbjct: 125 PLYDFTKSGRYAYKRVQPPESKVLLIEGIYALHEEIRHLLDLRVSISGGVHFDLIKRIFR 184
Query: 174 DIQRVGQEPEEIIHQISETVYPMYKAFIEPDLQTAHIKIINKFNPFTGFQNPTYILKSTR 233
D+ R GQ+P E + QI++TVYPMYKAFIEPDLQ A I+++NKFNPF G NP YILKS +
Sbjct: 185 DVHRTGQQPHESLQQITDTVYPMYKAFIEPDLQLAEIQVVNKFNPFGGLLNPIYILKSVK 244
Query: 234 P-VTVDEIKAVMSKEHT-ETTEETYDIYLLPPG---EDPDACQSYLRMRNRDGKYNLMFE 288
VTVD I +V++K E T YDIYL+PP + +C ++R+RN DG+Y++MF
Sbjct: 245 QGVTVDMIHSVLNKSTIQENTARYYDIYLIPPNTTFANSSSC-DWIRVRNADGQYSIMFS 303
Query: 289 EWVTDSPFIISPRITFEVSVRLLGGLMALGYTIATILKRSSHIFYDDRVCVKTDWLEQLN 348
E + + PFIISPR+ F V V +LGGLM+LGY + I+ R S IF D ++ + D LE+L
Sbjct: 304 EEIKEGPFIISPRVDFVVGVNMLGGLMSLGYQMVAIIHRKSTIFKDGKIIISYDELEELG 363
Query: 349 RKYVQVQGRDRLYVKYVGEQLGLDGSYVPRTYIEQIQ 385
+ +VQ++G D V+ G++LGL+ +Y+ ++YIE Q
Sbjct: 364 QTFVQIKGFDATSVQEAGKKLGLENNYLQKSYIELYQ 400
>sp|Q9GNF0|UCKD_DICDI Uridine-cytidine kinase D OS=Dictyostelium discoideum GN=udkD PE=2
SV=1
Length = 492
Score = 223 bits (567), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 116/344 (33%), Positives = 205/344 (59%), Gaps = 15/344 (4%)
Query: 48 GPSGAGKTVFTEKVLNFMPSIAVITMDNYNDSSRIIDGNFDDPRLTDYDTLLENIRGLKE 107
GP GAGKT K+ + + + +I++ ++ + D N+DDP L D+D ++ + LKE
Sbjct: 117 GPVGAGKTTLANKIGSLVNGV-IISLQDFVKLENVKDNNYDDPVLIDFDKVISTLNELKE 175
Query: 108 GKAVQVP-IYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSEKLRPLIDLRVSVTGGVHFD 166
K V +P I + K SR ++ + +S+++I+EG YALS ++RPL+D+ V++TGGVH D
Sbjct: 176 NKTVIIPKIVNRKMESR----SISLSTSKVIILEGAYALSARIRPLLDISVAITGGVHLD 231
Query: 167 LVKRVFRDIQRVGQE-PEEIIHQISETVYPMYKAFIEPDLQTAHIKIINKFNPFTGFQNP 225
L+K + R I G+ ++++ QI+ V+PM+KAF+EPDL A IKI + FNP + P
Sbjct: 232 LIKSIMRGIVTSGKNSSKDVLAQITNVVFPMFKAFVEPDLDQAKIKIHSSFNPMSQVVEP 291
Query: 226 TYILKSTRPVTVDEIKAVMSKEHTETTEETY-DIYLLPPGEDPDAC-----QSYLRMRNR 279
Y+ K+ +S + ++ + D+YL PP D ++++R+R
Sbjct: 292 VYVCKAKYDNNKQFFDQFLSSLNVVPVKKNFSDMYLYPPKYGVDGISQADKRNWIRIRRS 351
Query: 280 D-GKYNLMFEEWVTDSPFIISPRITFEVSVRLLGGLMALGYTIATILKRSSHIFYD-DRV 337
+ G++N+ F + D P + FE+SV+ LGGL++LGY I IL R+ ++YD + V
Sbjct: 352 EHGQFNITFYNEMMDGAVNTRPSLNFEISVKTLGGLLSLGYQIGAILNRTVEVWYDKNGV 411
Query: 338 CVKTDWLEQLNRKYVQVQGRDRLYVKYVGEQLGLDGSYVPRTYI 381
+ +++++L + ++Q++G R V E+L + G++VP+T++
Sbjct: 412 VITKEYIKELEKHFIQIKGHSRREVLDSAEKLKITGNHVPQTFL 455
>sp|Q9RXZ5|URK_DEIRA Uridine kinase OS=Deinococcus radiodurans (strain ATCC 13939 / DSM
20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 /
R1 / VKM B-1422) GN=udk PE=3 SV=1
Length = 210
Score = 96.7 bits (239), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 99/195 (50%), Gaps = 15/195 (7%)
Query: 48 GPSGAGKTVFTEKVLNFM--PSIAVITMDNY-NDSSRI-----IDGNFDDPRLTDYDTLL 99
G SG+GKT T +V+ + +AV+ DNY D S I + N+D P D+ L
Sbjct: 14 GGSGSGKTTVTRRVIETVGREGVAVLNQDNYYRDQSDIPFESRLHTNYDHPAAFDWALLR 73
Query: 100 ENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYAL-SEKLRPLIDLRVS 158
E + L G +++P YDF +R + T +P R+V++EG +AL E+LR + L+V
Sbjct: 74 EQLDALLAGVPIEMPEYDFTQHTRAAHTTRVLPG-RVVVLEGFFALYDEELRSRMGLKVF 132
Query: 159 VTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAFIEPDLQTAHIKIINKFNP 218
V ++R+ RD Q G+ PE +I Q V PM+ +F+EP + A + I P
Sbjct: 133 VDADADVRFIRRLLRDTQERGRTPESVIEQYLGFVRPMHLSFVEPTKRYADVII-----P 187
Query: 219 FTGFQNPTYILKSTR 233
G P + + R
Sbjct: 188 HGGMNEPALDMLAAR 202
>sp|B5ZBE2|URK_UREU1 Uridine kinase OS=Ureaplasma urealyticum serovar 10 (strain ATCC
33699 / Western) GN=udk PE=3 SV=1
Length = 207
Score = 93.6 bits (231), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 99/176 (56%), Gaps = 11/176 (6%)
Query: 48 GPSGAGKTVFTEKVLNFMP---SIAVITMDNYNDSSRIIDGN------FDDPRLTDYDTL 98
G SG+GKT F +++ +P + +I D+Y S+ ++ N +D P ++D +
Sbjct: 13 GASGSGKTTFANEIVARIPQNTTSVIICQDSYYISNSQLNKNERRLINYDHPSSFEWDLM 72
Query: 99 LENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSEK-LRPLIDLRV 157
E + +K+ K ++VPIYD+K+ R+ +T+++ +++ EGIYA+ + + + DL+V
Sbjct: 73 REQLSDIKKRKKIKVPIYDYKTEIRLD-KTIDISDVDVIVFEGIYAIYDDVINQIADLKV 131
Query: 158 SVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAFIEPDLQTAHIKII 213
+ L++R+ RD+ + E +I Q TV PMY F+EP + A++ ++
Sbjct: 132 FIETPKDECLIRRILRDVNERNRSFESVITQWRSTVSPMYDQFVEPSKKNANVSVL 187
>sp|Q91YL3|UCKL1_MOUSE Uridine-cytidine kinase-like 1 OS=Mus musculus GN=Uckl1 PE=1 SV=1
Length = 548
Score = 93.2 bits (230), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 101/177 (57%), Gaps = 14/177 (7%)
Query: 48 GPSGAGKTVFTEKVLNFM--PSIAVITMDNY--------NDSSRIIDGNFDDPRLTDYDT 97
G S +GKT ++ + P + +++MD++ + + + NFD P D+D
Sbjct: 105 GGSASGKTTVARMIIEALDVPWVVLLSMDSFYKVLTQQQQEQAACNNFNFDHPDAFDFDL 164
Query: 98 LLENIRGLKEGKAVQVPIYDFKSSSR-IGYRTLEVPSSRIVIIEGIYALSEK-LRPLIDL 155
++ ++ LK+G++VQVPIYDF + SR ++TL + ++I EGI A ++K L L+D+
Sbjct: 165 IISTLKKLKQGRSVQVPIYDFTTHSRKKDWKTLY--GANVIIFEGIMAFADKTLLELLDM 222
Query: 156 RVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAFIEPDLQTAHIKI 212
++ V LV+R+ RDI G++ E +I Q ++ V P + +I+P ++ A I +
Sbjct: 223 KIFVDTDSDIRLVRRLRRDISERGRDIEGVIKQYNKFVKPAFDQYIQPTMRLADIVV 279
>sp|Q9PQF9|URK_UREPA Uridine kinase OS=Ureaplasma parvum serovar 3 (strain ATCC 700970)
GN=udk PE=3 SV=1
Length = 207
Score = 92.4 bits (228), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 100/176 (56%), Gaps = 11/176 (6%)
Query: 48 GPSGAGKTVFTEKVLNFMP---SIAVITMDNYNDSSRIIDG------NFDDPRLTDYDTL 98
G SG+GKT F +++ +P + VI D+Y S+ ++ N+D P +++ +
Sbjct: 13 GASGSGKTTFANEIIARIPKNTTSVVICQDSYYISNSQLNKKERRLINYDHPSSFEWELM 72
Query: 99 LENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSEK-LRPLIDLRV 157
E + +K+ K ++VPIYD+K+ R+ +T+++ ++++EGIYA+ + + + DL++
Sbjct: 73 REQLSDIKKRKKIKVPIYDYKTEIRLD-KTIDISDVDVIVLEGIYAIYDDVINQIADLKI 131
Query: 158 SVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAFIEPDLQTAHIKII 213
+ L++R+ RD+ + E +I Q TV PMY F+EP + A++ ++
Sbjct: 132 FIETPKDECLIRRILRDVNERNRSFESVITQWRSTVSPMYDQFVEPSKKNANVSVL 187
>sp|B1AIX1|URK_UREP2 Uridine kinase OS=Ureaplasma parvum serovar 3 (strain ATCC 27815 /
27 / NCTC 11736) GN=udk PE=3 SV=1
Length = 207
Score = 92.4 bits (228), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 100/176 (56%), Gaps = 11/176 (6%)
Query: 48 GPSGAGKTVFTEKVLNFMP---SIAVITMDNYNDSSRIIDG------NFDDPRLTDYDTL 98
G SG+GKT F +++ +P + VI D+Y S+ ++ N+D P +++ +
Sbjct: 13 GASGSGKTTFANEIIARIPKNTTSVVICQDSYYISNSQLNKKERRLINYDHPSSFEWELM 72
Query: 99 LENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSEK-LRPLIDLRV 157
E + +K+ K ++VPIYD+K+ R+ +T+++ ++++EGIYA+ + + + DL++
Sbjct: 73 REQLSDIKKRKKIKVPIYDYKTEIRLD-KTIDISDVDVIVLEGIYAIYDDVINQIADLKI 131
Query: 158 SVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAFIEPDLQTAHIKII 213
+ L++R+ RD+ + E +I Q TV PMY F+EP + A++ ++
Sbjct: 132 FIETPKDECLIRRILRDVNERNRSFESVITQWRSTVSPMYDQFVEPSKKNANVSVL 187
>sp|C1CXN1|URK_DEIDV Uridine kinase OS=Deinococcus deserti (strain VCD115 / DSM 17065 /
LMG 22923) GN=udk PE=3 SV=1
Length = 207
Score = 92.4 bits (228), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 99/195 (50%), Gaps = 15/195 (7%)
Query: 48 GPSGAGKTVFTEKVLNFMPS--IAVITMDNY-NDSSRI-----IDGNFDDPRLTDYDTLL 99
G SG+GKT T +V+ + ++V+ DNY D S I ++ N+D P D+ L
Sbjct: 14 GGSGSGKTTVTRRVIETVGGNGVSVLNQDNYYRDQSDIPFNARLNTNYDHPAAFDWPLLR 73
Query: 100 ENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYAL-SEKLRPLIDLRVS 158
++ L G + +P YDF +R + +P + +V++EG +AL E+LR + L+V
Sbjct: 74 SHLDALLSGVPIDMPEYDFTQHTRSAQASTVLPGA-VVVLEGFFALYDEELRERMHLKVF 132
Query: 159 VTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAFIEPDLQTAHIKIINKFNP 218
V ++R+ RD Q G+ PE +I Q E V PM+ +F+EP + A + I P
Sbjct: 133 VDADADVRFIRRLLRDTQERGRTPESVIQQYLEYVRPMHLSFVEPTKRYADVII-----P 187
Query: 219 FTGFQNPTYILKSTR 233
G P + S R
Sbjct: 188 HGGMNEPALDMLSAR 202
>sp|Q4L6V8|URK_STAHJ Uridine kinase OS=Staphylococcus haemolyticus (strain JCSC1435)
GN=udk PE=3 SV=1
Length = 207
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 94/168 (55%), Gaps = 10/168 (5%)
Query: 54 KTVFTEKVLNFMP--SIAVITMDNY-NDSSRI-----IDGNFDDPRLTDYDTLLENIRGL 105
KT T +++ + S+A++ D Y D S + ++ N+D P D D L+EN++ L
Sbjct: 17 KTTVTNEIMKNLEGHSVALLAQDYYYKDQSHLTFEERLETNYDHPFAFDNDLLIENLKDL 76
Query: 106 KEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSEK-LRPLIDLRVSVTGGVH 164
+ G AV+VP YD+ + +R T+ ++I+EGI+AL K LR ++D+++ V
Sbjct: 77 RNGHAVEVPTYDYTNHTR-SNETIAFEPKDVIIVEGIFALENKTLRDMMDVKIYVDTDAD 135
Query: 165 FDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAFIEPDLQTAHIKI 212
+++R+ RD + G+ E +I+Q V PM+ FIEP + A I I
Sbjct: 136 LRILRRLVRDTKERGRSMESVINQYLNVVKPMHNQFIEPTKKYADIII 183
>sp|P67412|URK_STAAW Uridine kinase OS=Staphylococcus aureus (strain MW2) GN=udk PE=3
SV=1
Length = 207
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 95/168 (56%), Gaps = 10/168 (5%)
Query: 54 KTVFTEKVLNFMP--SIAVITMDNY-NDSSRI-----IDGNFDDPRLTDYDTLLENIRGL 105
KT T +++ + S+A++ D Y D + ++ N+D P D D L+EN++ L
Sbjct: 17 KTTVTNEIMKNLEGHSVALLAQDYYYKDQKHLTFDERLETNYDHPFAFDNDLLIENLKDL 76
Query: 106 KEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSEK-LRPLIDLRVSVTGGVH 164
K GKAV+VP YD+ S +R T++ ++I+EGI+AL K LR ++D+++ V
Sbjct: 77 KNGKAVEVPTYDYASHTRSDI-TIDFKPKDVIIVEGIFALENKVLRDMMDVKIYVDTDAD 135
Query: 165 FDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAFIEPDLQTAHIKI 212
+++R+ RD + G+ + +I+Q V PM+ FIEP + A I I
Sbjct: 136 LRILRRLTRDTKERGRSMDSVINQYLSVVRPMHDQFIEPTKKYADIII 183
>sp|A8Z4E9|URK_STAAT Uridine kinase OS=Staphylococcus aureus (strain USA300 / TCH1516)
GN=udk PE=3 SV=1
Length = 207
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 95/168 (56%), Gaps = 10/168 (5%)
Query: 54 KTVFTEKVLNFMP--SIAVITMDNY-NDSSRI-----IDGNFDDPRLTDYDTLLENIRGL 105
KT T +++ + S+A++ D Y D + ++ N+D P D D L+EN++ L
Sbjct: 17 KTTVTNEIMKNLEGHSVALLAQDYYYKDQKHLTFDERLETNYDHPFAFDNDLLIENLKDL 76
Query: 106 KEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSEK-LRPLIDLRVSVTGGVH 164
K GKAV+VP YD+ S +R T++ ++I+EGI+AL K LR ++D+++ V
Sbjct: 77 KNGKAVEVPTYDYASHTRSDI-TIDFKPKDVIIVEGIFALENKVLRDMMDVKIYVDTDAD 135
Query: 165 FDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAFIEPDLQTAHIKI 212
+++R+ RD + G+ + +I+Q V PM+ FIEP + A I I
Sbjct: 136 LRILRRLTRDTKERGRSMDSVINQYLSVVRPMHDQFIEPTKKYADIII 183
>sp|Q6G8V8|URK_STAAS Uridine kinase OS=Staphylococcus aureus (strain MSSA476) GN=udk
PE=3 SV=1
Length = 207
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 95/168 (56%), Gaps = 10/168 (5%)
Query: 54 KTVFTEKVLNFMP--SIAVITMDNY-NDSSRI-----IDGNFDDPRLTDYDTLLENIRGL 105
KT T +++ + S+A++ D Y D + ++ N+D P D D L+EN++ L
Sbjct: 17 KTTVTNEIMKNLEGHSVALLAQDYYYKDQKHLTFDERLETNYDHPFAFDNDLLIENLKDL 76
Query: 106 KEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSEK-LRPLIDLRVSVTGGVH 164
K GKAV+VP YD+ S +R T++ ++I+EGI+AL K LR ++D+++ V
Sbjct: 77 KNGKAVEVPTYDYASHTRSDI-TIDFKPKDVIIVEGIFALENKVLRDMMDVKIYVDTDAD 135
Query: 165 FDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAFIEPDLQTAHIKI 212
+++R+ RD + G+ + +I+Q V PM+ FIEP + A I I
Sbjct: 136 LRILRRLTRDTKERGRSMDSVINQYLSVVRPMHDQFIEPTKKYADIII 183
>sp|Q6GG92|URK_STAAR Uridine kinase OS=Staphylococcus aureus (strain MRSA252) GN=udk
PE=3 SV=1
Length = 207
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 95/168 (56%), Gaps = 10/168 (5%)
Query: 54 KTVFTEKVLNFMP--SIAVITMDNY-NDSSRI-----IDGNFDDPRLTDYDTLLENIRGL 105
KT T +++ + S+A++ D Y D + ++ N+D P D D L+EN++ L
Sbjct: 17 KTTVTNEIMKNLEGHSVALLAQDYYYKDQKHLTFDERLETNYDHPFAFDNDLLIENLKDL 76
Query: 106 KEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSEK-LRPLIDLRVSVTGGVH 164
K GKAV+VP YD+ S +R T++ ++I+EGI+AL K LR ++D+++ V
Sbjct: 77 KNGKAVEVPTYDYASHTRSDI-TIDFKPKDVIIVEGIFALENKVLRDMMDVKIYVDTDAD 135
Query: 165 FDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAFIEPDLQTAHIKI 212
+++R+ RD + G+ + +I+Q V PM+ FIEP + A I I
Sbjct: 136 LRILRRLTRDTKERGRSMDSVINQYLSVVRPMHDQFIEPTKKYADIII 183
>sp|P67411|URK_STAAN Uridine kinase OS=Staphylococcus aureus (strain N315) GN=udk PE=1
SV=1
Length = 207
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 95/168 (56%), Gaps = 10/168 (5%)
Query: 54 KTVFTEKVLNFMP--SIAVITMDNY-NDSSRI-----IDGNFDDPRLTDYDTLLENIRGL 105
KT T +++ + S+A++ D Y D + ++ N+D P D D L+EN++ L
Sbjct: 17 KTTVTNEIMKNLEGHSVALLAQDYYYKDQKHLTFDERLETNYDHPFAFDNDLLIENLKDL 76
Query: 106 KEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSEK-LRPLIDLRVSVTGGVH 164
K GKAV+VP YD+ S +R T++ ++I+EGI+AL K LR ++D+++ V
Sbjct: 77 KNGKAVEVPTYDYASHTRSDI-TIDFKPKDVIIVEGIFALENKVLRDMMDVKIYVDTDAD 135
Query: 165 FDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAFIEPDLQTAHIKI 212
+++R+ RD + G+ + +I+Q V PM+ FIEP + A I I
Sbjct: 136 LRILRRLTRDTKERGRSMDSVINQYLSVVRPMHDQFIEPTKKYADIII 183
>sp|P67410|URK_STAAM Uridine kinase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699)
GN=udk PE=1 SV=1
Length = 207
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 95/168 (56%), Gaps = 10/168 (5%)
Query: 54 KTVFTEKVLNFMP--SIAVITMDNY-NDSSRI-----IDGNFDDPRLTDYDTLLENIRGL 105
KT T +++ + S+A++ D Y D + ++ N+D P D D L+EN++ L
Sbjct: 17 KTTVTNEIMKNLEGHSVALLAQDYYYKDQKHLTFDERLETNYDHPFAFDNDLLIENLKDL 76
Query: 106 KEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSEK-LRPLIDLRVSVTGGVH 164
K GKAV+VP YD+ S +R T++ ++I+EGI+AL K LR ++D+++ V
Sbjct: 77 KNGKAVEVPTYDYASHTRSDI-TIDFKPKDVIIVEGIFALENKVLRDMMDVKIYVDTDAD 135
Query: 165 FDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAFIEPDLQTAHIKI 212
+++R+ RD + G+ + +I+Q V PM+ FIEP + A I I
Sbjct: 136 LRILRRLTRDTKERGRSMDSVINQYLSVVRPMHDQFIEPTKKYADIII 183
>sp|A6QHF2|URK_STAAE Uridine kinase OS=Staphylococcus aureus (strain Newman) GN=udk PE=3
SV=1
Length = 207
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 95/168 (56%), Gaps = 10/168 (5%)
Query: 54 KTVFTEKVLNFMP--SIAVITMDNY-NDSSRI-----IDGNFDDPRLTDYDTLLENIRGL 105
KT T +++ + S+A++ D Y D + ++ N+D P D D L+EN++ L
Sbjct: 17 KTTVTNEIMKNLEGHSVALLAQDYYYKDQKHLTFDERLETNYDHPFAFDNDLLIENLKDL 76
Query: 106 KEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSEK-LRPLIDLRVSVTGGVH 164
K GKAV+VP YD+ S +R T++ ++I+EGI+AL K LR ++D+++ V
Sbjct: 77 KNGKAVEVPTYDYASHTRSDI-TIDFKPKDVIIVEGIFALENKVLRDMMDVKIYVDTDAD 135
Query: 165 FDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAFIEPDLQTAHIKI 212
+++R+ RD + G+ + +I+Q V PM+ FIEP + A I I
Sbjct: 136 LRILRRLTRDTKERGRSMDSVINQYLSVVRPMHDQFIEPTKKYADIII 183
>sp|Q5HFF1|URK_STAAC Uridine kinase OS=Staphylococcus aureus (strain COL) GN=udk PE=3
SV=1
Length = 207
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 95/168 (56%), Gaps = 10/168 (5%)
Query: 54 KTVFTEKVLNFMP--SIAVITMDNY-NDSSRI-----IDGNFDDPRLTDYDTLLENIRGL 105
KT T +++ + S+A++ D Y D + ++ N+D P D D L+EN++ L
Sbjct: 17 KTTVTNEIMKNLEGHSVALLAQDYYYKDQKHLTFDERLETNYDHPFAFDNDLLIENLKDL 76
Query: 106 KEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSEK-LRPLIDLRVSVTGGVH 164
K GKAV+VP YD+ S +R T++ ++I+EGI+AL K LR ++D+++ V
Sbjct: 77 KNGKAVEVPTYDYASHTRSDI-TIDFKPKDVIIVEGIFALENKVLRDMMDVKIYVDTDAD 135
Query: 165 FDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAFIEPDLQTAHIKI 212
+++R+ RD + G+ + +I+Q V PM+ FIEP + A I I
Sbjct: 136 LRILRRLTRDTKERGRSMDSVINQYLSVVRPMHDQFIEPTKKYADIII 183
>sp|Q2YT67|URK_STAAB Uridine kinase OS=Staphylococcus aureus (strain bovine RF122 /
ET3-1) GN=udk PE=3 SV=1
Length = 207
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 95/168 (56%), Gaps = 10/168 (5%)
Query: 54 KTVFTEKVLNFMP--SIAVITMDNY-NDSSRI-----IDGNFDDPRLTDYDTLLENIRGL 105
KT T +++ + S+A++ D Y D + ++ N+D P D D L+EN++ L
Sbjct: 17 KTTVTNEIMKNLEGHSVALLAQDYYYKDQKHLTFDERLETNYDHPFAFDNDLLIENLKDL 76
Query: 106 KEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSEK-LRPLIDLRVSVTGGVH 164
K GKAV+VP YD+ S +R T++ ++I+EGI+AL K LR ++D+++ V
Sbjct: 77 KNGKAVEVPTYDYASHTRSDI-TIDFKPKDVIIVEGIFALENKVLRDMMDVKIYVDTDAD 135
Query: 165 FDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAFIEPDLQTAHIKI 212
+++R+ RD + G+ + +I+Q V PM+ FIEP + A I I
Sbjct: 136 LRILRRLTRDTKERGRSMDSVINQYLSVVRPMHDQFIEPTKKYADIII 183
>sp|A5ITD6|URK_STAA9 Uridine kinase OS=Staphylococcus aureus (strain JH9) GN=udk PE=3
SV=1
Length = 207
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 95/168 (56%), Gaps = 10/168 (5%)
Query: 54 KTVFTEKVLNFMP--SIAVITMDNY-NDSSRI-----IDGNFDDPRLTDYDTLLENIRGL 105
KT T +++ + S+A++ D Y D + ++ N+D P D D L+EN++ L
Sbjct: 17 KTTVTNEIMKNLEGHSVALLAQDYYYKDQKHLTFDERLETNYDHPFAFDNDLLIENLKDL 76
Query: 106 KEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSEK-LRPLIDLRVSVTGGVH 164
K GKAV+VP YD+ S +R T++ ++I+EGI+AL K LR ++D+++ V
Sbjct: 77 KNGKAVEVPTYDYASHTRSDI-TIDFKPKDVIIVEGIFALENKVLRDMMDVKIYVDTDAD 135
Query: 165 FDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAFIEPDLQTAHIKI 212
+++R+ RD + G+ + +I+Q V PM+ FIEP + A I I
Sbjct: 136 LRILRRLTRDTKERGRSMDSVINQYLSVVRPMHDQFIEPTKKYADIII 183
>sp|Q2FXW6|URK_STAA8 Uridine kinase OS=Staphylococcus aureus (strain NCTC 8325) GN=udk
PE=3 SV=1
Length = 207
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 95/168 (56%), Gaps = 10/168 (5%)
Query: 54 KTVFTEKVLNFMP--SIAVITMDNY-NDSSRI-----IDGNFDDPRLTDYDTLLENIRGL 105
KT T +++ + S+A++ D Y D + ++ N+D P D D L+EN++ L
Sbjct: 17 KTTVTNEIMKNLEGHSVALLAQDYYYKDQKHLTFDERLETNYDHPFAFDNDLLIENLKDL 76
Query: 106 KEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSEK-LRPLIDLRVSVTGGVH 164
K GKAV+VP YD+ S +R T++ ++I+EGI+AL K LR ++D+++ V
Sbjct: 77 KNGKAVEVPTYDYASHTRSDI-TIDFKPKDVIIVEGIFALENKVLRDMMDVKIYVDTDAD 135
Query: 165 FDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAFIEPDLQTAHIKI 212
+++R+ RD + G+ + +I+Q V PM+ FIEP + A I I
Sbjct: 136 LRILRRLTRDTKERGRSMDSVINQYLSVVRPMHDQFIEPTKKYADIII 183
>sp|Q2FGB5|URK_STAA3 Uridine kinase OS=Staphylococcus aureus (strain USA300) GN=udk PE=3
SV=1
Length = 207
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 95/168 (56%), Gaps = 10/168 (5%)
Query: 54 KTVFTEKVLNFMP--SIAVITMDNY-NDSSRI-----IDGNFDDPRLTDYDTLLENIRGL 105
KT T +++ + S+A++ D Y D + ++ N+D P D D L+EN++ L
Sbjct: 17 KTTVTNEIMKNLEGHSVALLAQDYYYKDQKHLTFDERLETNYDHPFAFDNDLLIENLKDL 76
Query: 106 KEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSEK-LRPLIDLRVSVTGGVH 164
K GKAV+VP YD+ S +R T++ ++I+EGI+AL K LR ++D+++ V
Sbjct: 77 KNGKAVEVPTYDYASHTRSDI-TIDFKPKDVIIVEGIFALENKVLRDMMDVKIYVDTDAD 135
Query: 165 FDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAFIEPDLQTAHIKI 212
+++R+ RD + G+ + +I+Q V PM+ FIEP + A I I
Sbjct: 136 LRILRRLTRDTKERGRSMDSVINQYLSVVRPMHDQFIEPTKKYADIII 183
>sp|A6U280|URK_STAA2 Uridine kinase OS=Staphylococcus aureus (strain JH1) GN=udk PE=3
SV=1
Length = 207
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 95/168 (56%), Gaps = 10/168 (5%)
Query: 54 KTVFTEKVLNFMP--SIAVITMDNY-NDSSRI-----IDGNFDDPRLTDYDTLLENIRGL 105
KT T +++ + S+A++ D Y D + ++ N+D P D D L+EN++ L
Sbjct: 17 KTTVTNEIMKNLEGHSVALLAQDYYYKDQKHLTFDERLETNYDHPFAFDNDLLIENLKDL 76
Query: 106 KEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSEK-LRPLIDLRVSVTGGVH 164
K GKAV+VP YD+ S +R T++ ++I+EGI+AL K LR ++D+++ V
Sbjct: 77 KNGKAVEVPTYDYASHTRSDI-TIDFKPKDVIIVEGIFALENKVLRDMMDVKIYVDTDAD 135
Query: 165 FDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAFIEPDLQTAHIKI 212
+++R+ RD + G+ + +I+Q V PM+ FIEP + A I I
Sbjct: 136 LRILRRLTRDTKERGRSMDSVINQYLSVVRPMHDQFIEPTKKYADIII 183
>sp|A7X320|URK_STAA1 Uridine kinase OS=Staphylococcus aureus (strain Mu3 / ATCC 700698)
GN=udk PE=3 SV=1
Length = 207
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 95/168 (56%), Gaps = 10/168 (5%)
Query: 54 KTVFTEKVLNFMP--SIAVITMDNY-NDSSRI-----IDGNFDDPRLTDYDTLLENIRGL 105
KT T +++ + S+A++ D Y D + ++ N+D P D D L+EN++ L
Sbjct: 17 KTTVTNEIMKNLEGHSVALLAQDYYYKDQKHLTFDERLETNYDHPFAFDNDLLIENLKDL 76
Query: 106 KEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSEK-LRPLIDLRVSVTGGVH 164
K GKAV+VP YD+ S +R T++ ++I+EGI+AL K LR ++D+++ V
Sbjct: 77 KNGKAVEVPTYDYASHTRSDI-TIDFKPKDVIIVEGIFALENKVLRDMMDVKIYVDTDAD 135
Query: 165 FDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAFIEPDLQTAHIKI 212
+++R+ RD + G+ + +I+Q V PM+ FIEP + A I I
Sbjct: 136 LRILRRLTRDTKERGRSMDSVINQYLSVVRPMHDQFIEPTKKYADIII 183
>sp|A7MVE7|URK_VIBHB Uridine kinase OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120)
GN=udk PE=3 SV=1
Length = 213
Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 94/176 (53%), Gaps = 14/176 (7%)
Query: 48 GPSGAGKTVFTEKVLNFM------PSIAVITMDNY-NDSSRI-----IDGNFDDPRLTDY 95
G S +GK++ + N + I VIT D Y ND S++ + N+D P D+
Sbjct: 14 GASASGKSLIASTIYNELREKVGDHQIGVITEDCYYNDQSQLSMEERVKTNYDHPSALDH 73
Query: 96 DTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSE-KLRPLID 154
D L E++ L G+AV+VP Y + +R T P +++I+EGI L++ +LR L+
Sbjct: 74 DLLCEHLEKLVRGEAVEVPEYSYTEHTRTSNTTPMTPK-KVIILEGILLLTDPRLRDLMH 132
Query: 155 LRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAFIEPDLQTAHI 210
V + + L++RV RD++ G+ E ++ Q +TV PM+ FIEP Q A I
Sbjct: 133 ATVFMDTPLDICLLRRVKRDVEERGRTMESVLKQYQQTVRPMFMQFIEPSKQYADI 188
>sp|Q9NWZ5|UCKL1_HUMAN Uridine-cytidine kinase-like 1 OS=Homo sapiens GN=UCKL1 PE=1 SV=2
Length = 548
Score = 90.9 bits (224), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 101/177 (57%), Gaps = 14/177 (7%)
Query: 48 GPSGAGKTVFTEKVLNFM--PSIAVITMDNY--------NDSSRIIDGNFDDPRLTDYDT 97
G S +GKT ++ + P + +++MD++ + + + NFD P D+D
Sbjct: 105 GGSASGKTTVARMIIEALDVPWVVLLSMDSFYKVLTEQQQEQAAHNNFNFDHPDAFDFDL 164
Query: 98 LLENIRGLKEGKAVQVPIYDFKSSSR-IGYRTLEVPSSRIVIIEGIYALSEK-LRPLIDL 155
++ ++ LK+GK+V+VPIYDF + SR ++TL + ++I EGI A ++K L L+D+
Sbjct: 165 IISTLKKLKQGKSVKVPIYDFTTHSRKKDWKTLY--GANVIIFEGIMAFADKTLLELLDM 222
Query: 156 RVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAFIEPDLQTAHIKI 212
++ V LV+R+ RDI G++ E +I Q ++ V P + +I+P ++ A I +
Sbjct: 223 KIFVDTDSDIRLVRRLRRDISERGRDIEGVIKQYNKFVKPSFDQYIQPTMRLADIVV 279
>sp|P44533|URK_HAEIN Uridine kinase OS=Haemophilus influenzae (strain ATCC 51907 / DSM
11121 / KW20 / Rd) GN=udk PE=3 SV=1
Length = 213
Score = 90.5 bits (223), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 93/178 (52%), Gaps = 14/178 (7%)
Query: 48 GPSGAGKTVFTEKVLNFMPS------IAVITMDNY-NDSSRI-----IDGNFDDPRLTDY 95
G S +GK+ V + + I +IT D+Y D S + + N+D P D
Sbjct: 13 GASASGKSSIASTVHKELCNELGCQEIGIITEDSYYKDQSHLEMTERVKTNYDHPNSMDR 72
Query: 96 DTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALS-EKLRPLID 154
D L+++++ LK G AV VP+Y + +R T P RIVI+EGI L+ E++R L D
Sbjct: 73 DLLIQHLKNLKNGSAVDVPVYSYVEHTRTNETTHFTP-KRIVILEGILLLTDERVRQLAD 131
Query: 155 LRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAFIEPDLQTAHIKI 212
+ V V + ++R+ RD++ G+ + +I Q TV PM+ FIEP Q A I I
Sbjct: 132 ISVFVDTPLDICFIRRLQRDMEERGRSLQSVIDQYRATVRPMFLQFIEPSKQYADIVI 189
>sp|A5UFT8|URK_HAEIG Uridine kinase OS=Haemophilus influenzae (strain PittGG) GN=udk
PE=3 SV=1
Length = 213
Score = 90.5 bits (223), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 93/178 (52%), Gaps = 14/178 (7%)
Query: 48 GPSGAGKTVFTEKVLNFMPS------IAVITMDNY-NDSSRI-----IDGNFDDPRLTDY 95
G S +GK+ V + + I +IT D+Y D S + + N+D P D
Sbjct: 13 GASASGKSSIASTVHKELCNELGCQEIGIITEDSYYKDQSHLEMTERVKTNYDHPNSMDR 72
Query: 96 DTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALS-EKLRPLID 154
D L+++++ LK G AV VP+Y + +R T P RIVI+EGI L+ E++R L D
Sbjct: 73 DLLIQHLKNLKNGSAVDVPVYSYVEHTRTNETTHFTP-KRIVILEGILLLTDERVRQLAD 131
Query: 155 LRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAFIEPDLQTAHIKI 212
+ V V + ++R+ RD++ G+ + +I Q TV PM+ FIEP Q A I I
Sbjct: 132 ISVFVDTPLDICFIRRLQRDMEERGRSLQSVIDQYRATVRPMFLQFIEPSKQYADIVI 189
>sp|Q4QP55|URK_HAEI8 Uridine kinase OS=Haemophilus influenzae (strain 86-028NP) GN=udk
PE=3 SV=1
Length = 213
Score = 90.5 bits (223), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 93/178 (52%), Gaps = 14/178 (7%)
Query: 48 GPSGAGKTVFTEKVLNFMPS------IAVITMDNY-NDSSRI-----IDGNFDDPRLTDY 95
G S +GK+ V + + I +IT D+Y D S + + N+D P D
Sbjct: 13 GASASGKSSIASTVHKELCNELGCQEIGIITEDSYYKDQSHLEMTERVKTNYDHPNSMDR 72
Query: 96 DTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALS-EKLRPLID 154
D L+++++ LK G AV VP+Y + +R T P RIVI+EGI L+ E++R L D
Sbjct: 73 DLLIQHLKNLKNGSAVDVPVYSYVEHTRTNETTHFTP-KRIVILEGILLLTDERVRQLAD 131
Query: 155 LRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAFIEPDLQTAHIKI 212
+ V V + ++R+ RD++ G+ + +I Q TV PM+ FIEP Q A I I
Sbjct: 132 ISVFVDTPLDICFIRRLQRDMEERGRSLQSVIDQYRATVRPMFLQFIEPSKQYADIVI 189
>sp|Q9KDD8|URK_BACHD Uridine kinase OS=Bacillus halodurans (strain ATCC BAA-125 / DSM
18197 / FERM 7344 / JCM 9153 / C-125) GN=udk PE=3 SV=1
Length = 211
Score = 89.0 bits (219), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 110/207 (53%), Gaps = 17/207 (8%)
Query: 48 GPSGAGKTVFTEKVLNFM--PSIAVITMDNY-NDSSRI-----IDGNFDDPRLTDYDTLL 99
G +G+GKT +++ SI +I D Y D S++ + N+D P D D L+
Sbjct: 12 GGTGSGKTTVAKEIFYQFNEKSIVLIEQDAYYKDQSQLSLEERLQTNYDHPLAFDNDLLI 71
Query: 100 ENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALS-EKLRPLIDLRVS 158
E++ L G+A++ P+YD+K +R L P ++I+EGI L E+LR L+D+++
Sbjct: 72 EHLHSLLNGQAIEKPVYDYKLHTRSNEVILVEPKD-VIILEGILLLEDERLRELMDIKLF 130
Query: 159 VTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAFIEPDLQTAHIKIINKFNP 218
V +++R+ RDI+ G+ E +I Q ++ V PM+ FIEP + A + I P
Sbjct: 131 VDTDADIRIIRRMVRDIRERGRTLESVIEQYTKVVRPMHMQFIEPTKRYADVII-----P 185
Query: 219 FTGFQNPTYI-LKSTRPVTVDEIKAVM 244
G QN I L T+ + E KAV+
Sbjct: 186 -EGGQNRVAIDLMVTKIRAIIEEKAVL 211
>sp|A9L4F4|URK_SHEB9 Uridine kinase OS=Shewanella baltica (strain OS195) GN=udk PE=3
SV=1
Length = 212
Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 93/176 (52%), Gaps = 14/176 (7%)
Query: 48 GPSGAGKTVFTEKVLNFM------PSIAVITMDNY-NDSSRI-----IDGNFDDPRLTDY 95
G S +GK++ + + + + I VI D Y D S + + N+D P+ D+
Sbjct: 13 GASASGKSLIAKTIFDELRRDLGTDQIGVINEDAYYRDQSHLSMDERVLTNYDHPKALDH 72
Query: 96 DTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSE-KLRPLID 154
L +++ LK G+AV +P Y + +RI TL + +++I+EGI L++ KLR L+D
Sbjct: 73 QLLCTHLQLLKSGEAVDIPCYSYTEHTRIA-ETLTMTPKKVIILEGILLLTDPKLRALMD 131
Query: 155 LRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAFIEPDLQTAHI 210
V + + ++R+ RD+ G+ E +I Q +TV PM+ FIEP Q A I
Sbjct: 132 ASVFMDTPLDICFLRRLTRDVAERGRTMESVISQYKKTVRPMFLQFIEPSKQYADI 187
>sp|A6WP54|URK_SHEB8 Uridine kinase OS=Shewanella baltica (strain OS185) GN=udk PE=3
SV=1
Length = 212
Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 93/176 (52%), Gaps = 14/176 (7%)
Query: 48 GPSGAGKTVFTEKVLNFM------PSIAVITMDNY-NDSSRI-----IDGNFDDPRLTDY 95
G S +GK++ + + + + I VI D Y D S + + N+D P+ D+
Sbjct: 13 GASASGKSLIAKTIFDELRRDLGTDQIGVINEDAYYRDQSHLSMDERVLTNYDHPKALDH 72
Query: 96 DTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSE-KLRPLID 154
L +++ LK G+AV +P Y + +RI TL + +++I+EGI L++ KLR L+D
Sbjct: 73 QLLCTHLQLLKSGEAVDIPCYSYTEHTRIA-ETLTMTPKKVIILEGILLLTDPKLRALMD 131
Query: 155 LRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAFIEPDLQTAHI 210
V + + ++R+ RD+ G+ E +I Q +TV PM+ FIEP Q A I
Sbjct: 132 ASVFMDTPLDICFLRRLTRDVAERGRTMESVISQYKKTVRPMFLQFIEPSKQYADI 187
>sp|B8E960|URK_SHEB2 Uridine kinase OS=Shewanella baltica (strain OS223) GN=udk PE=3
SV=1
Length = 212
Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 93/176 (52%), Gaps = 14/176 (7%)
Query: 48 GPSGAGKTVFTEKVLNFM------PSIAVITMDNY-NDSSRI-----IDGNFDDPRLTDY 95
G S +GK++ + + + + I VI D Y D S + + N+D P+ D+
Sbjct: 13 GASASGKSLIAKTIFDELRRDLGTDQIGVINEDAYYRDQSHLSMDERVLTNYDHPKALDH 72
Query: 96 DTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSE-KLRPLID 154
L +++ LK G+AV +P Y + +RI TL + +++I+EGI L++ KLR L+D
Sbjct: 73 QLLCTHLQLLKSGEAVDIPCYSYTEHTRIA-ETLTMTPKKVIILEGILLLTDPKLRALMD 131
Query: 155 LRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAFIEPDLQTAHI 210
V + + ++R+ RD+ G+ E +I Q +TV PM+ FIEP Q A I
Sbjct: 132 ASVFMDTPLDICFLRRLTRDVAERGRTMESVISQYKKTVRPMFLQFIEPSKQYADI 187
>sp|B9E6Y9|URK_MACCJ Uridine kinase OS=Macrococcus caseolyticus (strain JCSC5402) GN=udk
PE=3 SV=1
Length = 206
Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 92/168 (54%), Gaps = 10/168 (5%)
Query: 54 KTVFTEKVLNFMP--SIAVITMDNYNDSS------RIIDGNFDDPRLTDYDTLLENIRGL 105
KT T K+L + S+A+I D Y + + N+D P D + L++N++ L
Sbjct: 17 KTSVTSKILKNLEGYSVALIEQDYYYKNQDHLTFEERLKTNYDHPFAFDNELLIQNLKDL 76
Query: 106 KEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYAL-SEKLRPLIDLRVSVTGGVH 164
+ GK V+VP YD+ + +R +T+ ++I+EGI+AL + LR L+D+++ V
Sbjct: 77 RNGKTVEVPTYDYSNHTR-SEKTITFEPKDVIIVEGIFALENSNLRDLMDVKIYVDTDAD 135
Query: 165 FDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAFIEPDLQTAHIKI 212
+++R+ RDI+ G+ E +I Q V PM+ FIEP + A I I
Sbjct: 136 LRILRRIVRDIEERGRTMESVIDQYLTVVRPMHNQFIEPTKKYADIII 183
>sp|A5UB17|URK_HAEIE Uridine kinase OS=Haemophilus influenzae (strain PittEE) GN=udk
PE=3 SV=1
Length = 213
Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 84/152 (55%), Gaps = 8/152 (5%)
Query: 68 IAVITMDNY-NDSSRI-----IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSS 121
I +IT D+Y D S + + N+D P D D L+++++ LK G AV VP+Y +
Sbjct: 39 IGIITEDSYYKDQSHLEMTERVKTNYDHPSSMDRDLLIQHLKNLKNGSAVDVPVYSYVEH 98
Query: 122 SRIGYRTLEVPSSRIVIIEGIYALS-EKLRPLIDLRVSVTGGVHFDLVKRVFRDIQRVGQ 180
+R T P RIVI+EGI L+ E++R L D+ V V + ++R+ RD++ G+
Sbjct: 99 TRTNETTHFTP-KRIVILEGILLLTDERVRQLADISVFVDTPLDICFIRRLQRDMEERGR 157
Query: 181 EPEEIIHQISETVYPMYKAFIEPDLQTAHIKI 212
+ +I Q TV PM+ FIEP Q A I I
Sbjct: 158 SLQSVIDQYRATVRPMFLQFIEPSKQYADIVI 189
>sp|A1S796|URK_SHEAM Uridine kinase OS=Shewanella amazonensis (strain ATCC BAA-1098 /
SB2B) GN=udk PE=3 SV=1
Length = 212
Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 91/171 (53%), Gaps = 9/171 (5%)
Query: 48 GPSGAGKTVFTEKVLNF-MPSIAVITMDNY-NDSSRI-----IDGNFDDPRLTDYDTLLE 100
G S KT++ E + I VI D Y D S + + N+D P+ D++ L +
Sbjct: 18 GKSLIAKTIYEELCRDLGTDQIGVIAEDAYYRDQSHLSMEERVKTNYDHPKAMDHELLAQ 77
Query: 101 NIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSE-KLRPLIDLRVSV 159
++R LKEG +V++P+Y + +R+ P +++I+EGI L++ LR L+D V +
Sbjct: 78 HLRSLKEGDSVEIPVYSYTEHTRMSDTRTMTP-KKVIILEGILLLTDPHLRDLMDASVFM 136
Query: 160 TGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAFIEPDLQTAHI 210
+ ++R+ RD+ G+ E +I Q +TV PM+ FIEP Q A I
Sbjct: 137 DTPLDICFLRRLTRDVAERGRTMESVISQYQKTVRPMFLQFIEPSKQYADI 187
>sp|Q9KT67|URK_VIBCH Uridine kinase OS=Vibrio cholerae serotype O1 (strain ATCC 39315 /
El Tor Inaba N16961) GN=udk PE=3 SV=2
Length = 213
Score = 86.7 bits (213), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 94/176 (53%), Gaps = 14/176 (7%)
Query: 48 GPSGAGKTVFTEKVLNFMPS------IAVITMDNY-NDSSRI-----IDGNFDDPRLTDY 95
G S +GK++ + N + + I VIT D Y D S + + N+D P D+
Sbjct: 14 GASASGKSLIASTIYNELRAKVGDHQIGVITEDCYYKDQSHLSMEERVKTNYDHPSALDH 73
Query: 96 DTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSE-KLRPLID 154
D L ++++ L G+AV+VP Y + +R T P +++I+EGI L++ +LR L+
Sbjct: 74 DLLCQHLQMLARGEAVEVPEYSYTEHTRTEQTTTMTPK-KVIILEGILLLTDPRLRDLMH 132
Query: 155 LRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAFIEPDLQTAHI 210
V + + L++RV RD+Q G+ E ++ Q ETV PM+ FIEP Q A I
Sbjct: 133 ATVFMDTPLDICLLRRVKRDVQERGRTMESVLKQYQETVRPMFMQFIEPSKQYADI 188
>sp|Q87N09|URK_VIBPA Uridine kinase OS=Vibrio parahaemolyticus serotype O3:K6 (strain
RIMD 2210633) GN=udk PE=3 SV=1
Length = 213
Score = 86.7 bits (213), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 94/176 (53%), Gaps = 14/176 (7%)
Query: 48 GPSGAGKTVFTEKVLNFMPS------IAVITMDNY-NDSSRI-----IDGNFDDPRLTDY 95
G S +GK++ + N + + I VIT D Y ND S + + N+D P D+
Sbjct: 14 GASASGKSLIASTIYNELRAKVGDHQIGVITEDCYYNDQSHLSMEERVKTNYDHPSALDH 73
Query: 96 DTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSE-KLRPLID 154
D L E++ L G+AV+VP Y + +R T P +++I+EGI L++ +LR L+
Sbjct: 74 DLLCEHLEKLVRGEAVEVPEYSYTEHTRTSNTTTMTPK-KVIILEGILLLTDPRLRDLMH 132
Query: 155 LRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAFIEPDLQTAHI 210
V + + L++RV RD++ G+ E ++ Q +TV PM+ FIEP Q A I
Sbjct: 133 ATVFMDTPLDICLLRRVKRDVEERGRTMESVLKQYQQTVRPMFMQFIEPSKQYADI 188
>sp|A3D5E3|URK_SHEB5 Uridine kinase OS=Shewanella baltica (strain OS155 / ATCC BAA-1091)
GN=udk PE=3 SV=1
Length = 212
Score = 86.3 bits (212), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 92/176 (52%), Gaps = 14/176 (7%)
Query: 48 GPSGAGKTVFTEKVLNFM------PSIAVITMDNY-NDSSRI-----IDGNFDDPRLTDY 95
G S +GK++ + + + + I VI D Y D S + + N+D P+ D+
Sbjct: 13 GASASGKSLIAKTIFDELRRDLGTDQIGVINEDAYYRDQSHLSMDERVLTNYDHPKALDH 72
Query: 96 DTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSE-KLRPLID 154
L +++ LK G+AV +P Y + +R TL + +++I+EGI L++ KLR L+D
Sbjct: 73 QLLCTHLQLLKSGEAVDIPCYSYTEHTRTA-ETLTMTPKKVIILEGILLLTDPKLRALMD 131
Query: 155 LRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAFIEPDLQTAHI 210
V + + ++R+ RD+ G+ E +I Q +TV PM+ FIEP Q A I
Sbjct: 132 ASVFMDTPLDICFLRRLTRDVAERGRTMESVISQYKKTVRPMFLQFIEPSKQYADI 187
>sp|Q8CSB2|URK_STAES Uridine kinase OS=Staphylococcus epidermidis (strain ATCC 12228)
GN=udk PE=3 SV=1
Length = 207
Score = 86.3 bits (212), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 92/168 (54%), Gaps = 10/168 (5%)
Query: 54 KTVFTEKVLNFMP--SIAVITMDNY-NDSSRI-----IDGNFDDPRLTDYDTLLENIRGL 105
KT T ++ + S+A++ D Y D S + ++ N+D P D D L+ N++ L
Sbjct: 17 KTTVTNAIMKNLEGHSVALLAQDYYYKDQSHLTFEERLETNYDHPFAFDNDLLIHNLKDL 76
Query: 106 KEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYAL-SEKLRPLIDLRVSVTGGVH 164
+ GK V+VP YD+ +R T+ ++I+EGI+AL + LR ++D+++ V
Sbjct: 77 RNGKPVEVPTYDYSQHTR-SKETIAFDPKDVIIVEGIFALENNTLRDMMDVKIYVDTDAD 135
Query: 165 FDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAFIEPDLQTAHIKI 212
+++R+ RD + G+ E +I+Q V PM++ FIEP + A I I
Sbjct: 136 LRILRRLTRDTKERGRTMESVINQYLNVVRPMHEQFIEPTKKHADIII 183
>sp|Q5HNT9|URK_STAEQ Uridine kinase OS=Staphylococcus epidermidis (strain ATCC 35984 /
RP62A) GN=udk PE=3 SV=1
Length = 207
Score = 86.3 bits (212), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 92/168 (54%), Gaps = 10/168 (5%)
Query: 54 KTVFTEKVLNFMP--SIAVITMDNY-NDSSRI-----IDGNFDDPRLTDYDTLLENIRGL 105
KT T ++ + S+A++ D Y D S + ++ N+D P D D L+ N++ L
Sbjct: 17 KTTVTNAIMKNLEGHSVALLAQDYYYKDQSHLTFEERLETNYDHPFAFDNDLLIHNLKDL 76
Query: 106 KEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYAL-SEKLRPLIDLRVSVTGGVH 164
+ GK V+VP YD+ +R T+ ++I+EGI+AL + LR ++D+++ V
Sbjct: 77 RNGKPVEVPTYDYSQHTR-SKETIAFDPKDVIIVEGIFALENNTLRDMMDVKIYVDTDAD 135
Query: 165 FDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAFIEPDLQTAHIKI 212
+++R+ RD + G+ E +I+Q V PM++ FIEP + A I I
Sbjct: 136 LRILRRLTRDTKERGRTMESVINQYLNVVRPMHEQFIEPTKKHADIII 183
>sp|Q0HVY0|URK_SHESR Uridine kinase OS=Shewanella sp. (strain MR-7) GN=udk PE=3 SV=1
Length = 212
Score = 86.3 bits (212), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 94/176 (53%), Gaps = 14/176 (7%)
Query: 48 GPSGAGKTVFTEKVLNFM------PSIAVITMDNY-NDSSRI-----IDGNFDDPRLTDY 95
G S +GK++ + + + + I VI D Y D S + + N+D P+ D+
Sbjct: 13 GASASGKSLIAKTIFDELRRDLGTDQIGVINEDAYYRDQSHLSMDERVLTNYDHPKALDH 72
Query: 96 DTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSE-KLRPLID 154
L +++ LK G+AV +P Y + +R+ T+++ +++I+EGI L++ KLR L+D
Sbjct: 73 QLLCTHLQLLKSGEAVDIPCYSYTEHTRMA-ETVKMTPKKVIILEGILLLTDPKLRELMD 131
Query: 155 LRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAFIEPDLQTAHI 210
V + + ++R+ RD+ G+ E +I Q +TV PM+ FIEP Q A I
Sbjct: 132 ASVFMDTPLDICFLRRLTRDVAERGRTMESVISQYKKTVRPMFLQFIEPSKQYADI 187
>sp|Q0HJN4|URK_SHESM Uridine kinase OS=Shewanella sp. (strain MR-4) GN=udk PE=3 SV=1
Length = 212
Score = 86.3 bits (212), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 94/176 (53%), Gaps = 14/176 (7%)
Query: 48 GPSGAGKTVFTEKVLNFM------PSIAVITMDNY-NDSSRI-----IDGNFDDPRLTDY 95
G S +GK++ + + + + I VI D Y D S + + N+D P+ D+
Sbjct: 13 GASASGKSLIAKTIFDELRRDLGTDQIGVINEDAYYRDQSHLSMDERVLTNYDHPKALDH 72
Query: 96 DTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSE-KLRPLID 154
L +++ LK G+AV +P Y + +R+ T+++ +++I+EGI L++ KLR L+D
Sbjct: 73 QLLCTHLQLLKSGEAVDIPCYSYTEHTRMA-ETVKMTPKKVIILEGILLLTDPKLRELMD 131
Query: 155 LRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAFIEPDLQTAHI 210
V + + ++R+ RD+ G+ E +I Q +TV PM+ FIEP Q A I
Sbjct: 132 ASVFMDTPLDICFLRRLTRDVAERGRTMESVISQYKKTVRPMFLQFIEPSKQYADI 187
>sp|A0KW26|URK_SHESA Uridine kinase OS=Shewanella sp. (strain ANA-3) GN=udk PE=3 SV=1
Length = 212
Score = 86.3 bits (212), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 94/176 (53%), Gaps = 14/176 (7%)
Query: 48 GPSGAGKTVFTEKVLNFM------PSIAVITMDNY-NDSSRI-----IDGNFDDPRLTDY 95
G S +GK++ + + + + I VI D Y D S + + N+D P+ D+
Sbjct: 13 GASASGKSLIAKTIFDELRRDLGTDQIGVINEDAYYRDQSHLSMDERVLTNYDHPKALDH 72
Query: 96 DTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSE-KLRPLID 154
L +++ LK G+AV +P Y + +R+ T+++ +++I+EGI L++ KLR L+D
Sbjct: 73 QLLCTHLQLLKSGEAVDIPCYSYTEHTRMA-ETVKMTPKKVIILEGILLLTDPKLRELMD 131
Query: 155 LRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAFIEPDLQTAHI 210
V + + ++R+ RD+ G+ E +I Q +TV PM+ FIEP Q A I
Sbjct: 132 ASVFMDTPLDICFLRRLTRDVAERGRTMESVISQYKKTVRPMFLQFIEPSKQYADI 187
>sp|Q8EDX4|URK_SHEON Uridine kinase OS=Shewanella oneidensis (strain MR-1) GN=udk PE=3
SV=1
Length = 212
Score = 86.3 bits (212), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 94/176 (53%), Gaps = 14/176 (7%)
Query: 48 GPSGAGKTVFTEKVLNFM------PSIAVITMDNY-NDSSRI-----IDGNFDDPRLTDY 95
G S +GK++ + + + + I VI D Y D S + + N+D P+ D+
Sbjct: 13 GASASGKSLIAKTIFDELRRDLGTDQIGVINEDAYYRDQSHLSMDERVLTNYDHPKALDH 72
Query: 96 DTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSE-KLRPLID 154
L +++ LK G+AV +P Y + +R+ T+++ +++I+EGI L++ KLR L+D
Sbjct: 73 QLLCTHLQLLKSGEAVDIPCYSYTEHTRMA-ETVKMTPKKVIILEGILLLTDPKLRELMD 131
Query: 155 LRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAFIEPDLQTAHI 210
V + + ++R+ RD+ G+ E +I Q +TV PM+ FIEP Q A I
Sbjct: 132 ASVFMDTPLDICFLRRLTRDVAERGRTMESVISQYKKTVRPMFLQFIEPSKQYADI 187
>sp|Q7MM12|URK_VIBVY Uridine kinase OS=Vibrio vulnificus (strain YJ016) GN=udk PE=3 SV=2
Length = 213
Score = 85.9 bits (211), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 95/176 (53%), Gaps = 14/176 (7%)
Query: 48 GPSGAGKTVFTEKVLNFMPS------IAVITMDNY-NDSSRI-----IDGNFDDPRLTDY 95
G S +GK++ + N + + I VIT D Y ND S + + N+D P D+
Sbjct: 14 GASASGKSLIASTIYNELRAKVGDHQIGVITEDCYYNDQSHLSMEERVKTNYDHPNALDH 73
Query: 96 DTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSE-KLRPLID 154
D L E++ L +G++V+VP Y + +R T P +++I+EGI L++ +LR L+
Sbjct: 74 DLLCEHLEKLMKGESVEVPEYSYTEHTRTENTTTMTPK-KVIILEGILLLTDPRLRDLMH 132
Query: 155 LRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAFIEPDLQTAHI 210
V + + L++RV RD++ G+ E ++ Q +TV PM+ FIEP Q A I
Sbjct: 133 ATVFMDTPLDICLLRRVKRDVEERGRTMESVLKQYQKTVRPMFMQFIEPSKQYADI 188
>sp|Q8D8F4|URK_VIBVU Uridine kinase OS=Vibrio vulnificus (strain CMCP6) GN=udk PE=3 SV=1
Length = 213
Score = 85.9 bits (211), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 95/176 (53%), Gaps = 14/176 (7%)
Query: 48 GPSGAGKTVFTEKVLNFMPS------IAVITMDNY-NDSSRI-----IDGNFDDPRLTDY 95
G S +GK++ + N + + I VIT D Y ND S + + N+D P D+
Sbjct: 14 GASASGKSLIASTIYNELRAKVGDHQIGVITEDCYYNDQSHLSMEERVKTNYDHPNALDH 73
Query: 96 DTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSE-KLRPLID 154
D L E++ L +G++V+VP Y + +R T P +++I+EGI L++ +LR L+
Sbjct: 74 DLLCEHLEKLMKGESVEVPEYSYTEHTRTENTTTMTPK-KVIILEGILLLTDPRLRDLMH 132
Query: 155 LRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAFIEPDLQTAHI 210
V + + L++RV RD++ G+ E ++ Q +TV PM+ FIEP Q A I
Sbjct: 133 ATVFMDTPLDICLLRRVKRDVEERGRTMESVLKQYQKTVRPMFMQFIEPSKQYADI 188
>sp|B9DNJ4|URK_STACT Uridine kinase OS=Staphylococcus carnosus (strain TM300) GN=udk
PE=3 SV=1
Length = 208
Score = 85.9 bits (211), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 91/168 (54%), Gaps = 10/168 (5%)
Query: 54 KTVFTEKVLNFMP--SIAVITMDNY-NDSSRI-----IDGNFDDPRLTDYDTLLENIRGL 105
KT T ++L+ + S+A+I D Y D S + + N+D P D D L++N+ L
Sbjct: 17 KTSVTNEILHNLEGHSVALIAQDYYYKDQSHLTFEERLKTNYDHPFAFDNDLLIQNLMDL 76
Query: 106 KEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSEK-LRPLIDLRVSVTGGVH 164
+ G V+VP YD+ + +R T+ ++I+EGI+AL K LR L+D+++ V
Sbjct: 77 RNGIPVEVPTYDYVNHTR-SAETIAFQPKDVIIVEGIFALENKTLRDLMDVKIYVDTDAD 135
Query: 165 FDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAFIEPDLQTAHIKI 212
+++R+ RD + G+ E +I Q V PM+ FIEP + A I I
Sbjct: 136 LRILRRLMRDTKERGRSMESVIEQYLNVVRPMHNQFIEPTKRYADIII 183
>sp|Q081H5|URK_SHEFN Uridine kinase OS=Shewanella frigidimarina (strain NCIMB 400)
GN=udk PE=3 SV=1
Length = 212
Score = 85.5 bits (210), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 88/171 (51%), Gaps = 9/171 (5%)
Query: 48 GPSGAGKTVFTEKVLNF-MPSIAVITMDNY-NDSSRI-----IDGNFDDPRLTDYDTLLE 100
G S KT+F E + I VI D Y +D S + + N+D P+ D+ L
Sbjct: 18 GKSLIAKTIFEELCRDLGTNQIGVINEDAYYHDQSHLTMEDRVKTNYDHPKALDHQLLAS 77
Query: 101 NIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSE-KLRPLIDLRVSV 159
++ LK+G+ V +P Y + +RI TL + +++I+EGI L+ KLR L+D V +
Sbjct: 78 HLTQLKQGEPVSIPCYSYTEHTRIS-DTLTMQPKKVIILEGILLLTNPKLRDLMDASVFM 136
Query: 160 TGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAFIEPDLQTAHI 210
+ ++R+ RD+ G+ E +I Q TV PM+ FIEP Q A I
Sbjct: 137 DTPLDICFLRRLTRDVAERGRTMESVISQYKRTVRPMFLQFIEPSKQYADI 187
>sp|Q74KI9|URK_LACJO Uridine kinase OS=Lactobacillus johnsonii (strain CNCM I-12250 /
La1 / NCC 533) GN=udk PE=3 SV=1
Length = 211
Score = 85.5 bits (210), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 85/150 (56%), Gaps = 8/150 (5%)
Query: 68 IAVITMDNY---NDSSRIIDG---NFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSS 121
I ++T D+Y ND+ + D N+D P D L+E +R L + KAV++P+YDF +
Sbjct: 36 ILIMTQDSYYKNNDNLSMADRKKINYDHPDAFDMPLLVEQLRQLMDYKAVEMPVYDFTAH 95
Query: 122 SRIGYRTLEVPSSRIVIIEGIYALSEK-LRPLIDLRVSVTGGVHFDLVKRVFRDIQRVGQ 180
+R +T+ + I+I+EGI L E+ LR L+ ++V V ++R+ RD Q G+
Sbjct: 96 TR-SEKTIHTEPADIIILEGILVLGEENLRDLMSIKVFVDTDDDIRFIRRLERDTQERGR 154
Query: 181 EPEEIIHQISETVYPMYKAFIEPDLQTAHI 210
E +I+Q TV PMY FIEP + A I
Sbjct: 155 SVESVINQYLATVKPMYNQFIEPTKRYADI 184
>sp|Q12MJ0|URK_SHEDO Uridine kinase OS=Shewanella denitrificans (strain OS217 / ATCC
BAA-1090 / DSM 15013) GN=udk PE=3 SV=1
Length = 212
Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 91/176 (51%), Gaps = 14/176 (7%)
Query: 48 GPSGAGKTVFTEKVLNFM------PSIAVITMDNY-NDSSRI-----IDGNFDDPRLTDY 95
G S +GK++ + + + + I VI D Y D S + + N+D P+ D+
Sbjct: 13 GASASGKSLIAKTIFDELRRDLGTDQIGVINEDAYYKDQSHMSMEERVQTNYDHPKALDH 72
Query: 96 DTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSE-KLRPLID 154
L +++ LK G+A +P Y + +RI T+ + +++I+EGI L++ KLR L+D
Sbjct: 73 QLLCSHLKQLKAGQAADIPCYSYTEHTRIS-ETIHMTPKKVIILEGILLLTDPKLRDLMD 131
Query: 155 LRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETVYPMYKAFIEPDLQTAHI 210
V + + ++R+ RD+ + E +I Q +TV PM+ FIEP Q A I
Sbjct: 132 ASVFMDTPLDICFLRRLTRDVAERDRTMESVISQYKKTVRPMFLQFIEPSKQYADI 187
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.135 0.379
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 228,619,613
Number of Sequences: 539616
Number of extensions: 9742025
Number of successful extensions: 32705
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 246
Number of HSP's successfully gapped in prelim test: 79
Number of HSP's that attempted gapping in prelim test: 32214
Number of HSP's gapped (non-prelim): 373
length of query: 636
length of database: 191,569,459
effective HSP length: 124
effective length of query: 512
effective length of database: 124,657,075
effective search space: 63824422400
effective search space used: 63824422400
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)