Query 006671
Match_columns 636
No_of_seqs 334 out of 1720
Neff 5.0
Searched_HMMs 29240
Date Mon Mar 25 05:51:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006671.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006671hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4fcc_A Glutamate dehydrogenase 100.0 8E-137 3E-141 1113.9 43.8 441 190-636 7-450 (450)
2 3r3j_A Glutamate dehydrogenase 100.0 6E-136 2E-140 1106.7 44.4 444 189-636 12-456 (456)
3 2bma_A Glutamate dehydrogenase 100.0 1E-133 4E-138 1093.1 46.5 445 189-636 25-470 (470)
4 1bgv_A Glutamate dehydrogenase 100.0 3E-127 1E-131 1040.3 44.7 441 191-636 2-448 (449)
5 3k92_A NAD-GDH, NAD-specific g 100.0 6E-125 2E-129 1015.9 39.2 409 208-636 15-424 (424)
6 3aog_A Glutamate dehydrogenase 100.0 2E-123 7E-128 1008.7 41.6 413 205-636 26-439 (440)
7 3aoe_E Glutamate dehydrogenase 100.0 1E-122 4E-127 998.8 38.5 409 205-636 9-418 (419)
8 2yfq_A Padgh, NAD-GDH, NAD-spe 100.0 4E-122 1E-126 996.0 36.9 409 209-636 6-421 (421)
9 3mw9_A GDH 1, glutamate dehydr 100.0 4E-121 1E-125 998.3 43.3 417 205-636 4-499 (501)
10 2tmg_A Protein (glutamate dehy 100.0 1E-119 4E-124 974.9 42.0 411 207-636 2-414 (415)
11 1v9l_A Glutamate dehydrogenase 100.0 2E-120 5E-125 982.6 35.1 410 208-636 4-421 (421)
12 1gtm_A Glutamate dehydrogenase 100.0 8E-107 3E-111 876.8 37.5 411 207-636 2-417 (419)
13 1c1d_A L-phenylalanine dehydro 100.0 2.6E-86 8.8E-91 703.2 27.2 336 239-633 8-352 (355)
14 1leh_A Leucine dehydrogenase; 100.0 7.6E-84 2.6E-88 686.5 25.7 337 239-636 10-353 (364)
15 3ing_A Homoserine dehydrogenas 97.9 3E-05 1E-09 81.4 8.8 178 416-611 4-205 (325)
16 2o4c_A Erythronate-4-phosphate 97.5 0.00063 2.2E-08 72.9 13.3 159 346-551 60-229 (380)
17 1vl6_A Malate oxidoreductase; 97.4 0.00069 2.4E-08 72.8 10.7 115 401-534 177-296 (388)
18 3d4o_A Dipicolinate synthase s 97.3 0.0017 5.9E-08 66.1 12.0 118 405-551 144-263 (293)
19 3n58_A Adenosylhomocysteinase; 97.2 0.0014 4.7E-08 71.9 11.5 109 397-534 227-337 (464)
20 2d5c_A AROE, shikimate 5-dehyd 97.1 0.0032 1.1E-07 62.9 12.2 136 404-569 105-244 (263)
21 3do5_A HOM, homoserine dehydro 97.0 0.0011 3.6E-08 69.7 7.9 175 417-611 3-204 (327)
22 3jtm_A Formate dehydrogenase, 96.9 0.014 4.9E-07 61.7 15.5 159 411-598 159-329 (351)
23 2rir_A Dipicolinate synthase, 96.8 0.0055 1.9E-07 62.5 11.2 117 408-554 149-270 (300)
24 4a26_A Putative C-1-tetrahydro 96.8 0.01 3.6E-07 61.8 13.0 53 391-448 144-197 (300)
25 3p2o_A Bifunctional protein fo 96.8 0.011 3.8E-07 61.1 13.2 52 392-448 140-192 (285)
26 2a9f_A Putative malic enzyme ( 96.8 0.0037 1.3E-07 67.4 9.9 152 347-532 133-290 (398)
27 3gvp_A Adenosylhomocysteinase 96.8 0.0064 2.2E-07 66.3 11.5 111 396-535 199-311 (435)
28 2hk9_A Shikimate dehydrogenase 96.8 0.012 4.1E-07 59.4 12.9 143 394-570 111-258 (275)
29 3c8m_A Homoserine dehydrogenas 96.7 0.0016 5.5E-08 68.1 6.3 178 417-611 7-209 (331)
30 2j6i_A Formate dehydrogenase; 96.7 0.0098 3.3E-07 63.1 12.2 110 411-549 159-277 (364)
31 2w2k_A D-mandelate dehydrogena 96.7 0.023 8E-07 59.7 15.0 118 410-556 157-284 (348)
32 1nyt_A Shikimate 5-dehydrogena 96.7 0.025 8.5E-07 57.0 14.6 132 395-553 102-237 (271)
33 1mx3_A CTBP1, C-terminal bindi 96.7 0.02 6.7E-07 60.5 14.3 155 412-597 164-332 (347)
34 3h9u_A Adenosylhomocysteinase; 96.7 0.0067 2.3E-07 66.2 11.0 103 408-539 203-308 (436)
35 1b0a_A Protein (fold bifunctio 96.6 0.018 6.3E-07 59.6 13.0 52 392-448 139-191 (288)
36 4hy3_A Phosphoglycerate oxidor 96.5 0.024 8.2E-07 60.4 13.7 157 411-597 171-337 (365)
37 4e5n_A Thermostable phosphite 96.4 0.024 8.2E-07 59.3 12.9 110 411-549 140-256 (330)
38 3oet_A Erythronate-4-phosphate 96.4 0.024 8.2E-07 60.8 13.1 172 394-598 97-281 (381)
39 2nac_A NAD-dependent formate d 96.4 0.05 1.7E-06 58.5 15.4 110 411-549 186-303 (393)
40 2pi1_A D-lactate dehydrogenase 96.4 0.023 7.7E-07 59.7 12.2 108 411-549 136-250 (334)
41 1wwk_A Phosphoglycerate dehydr 96.4 0.023 7.9E-07 58.7 12.0 108 412-549 138-252 (307)
42 4g2n_A D-isomer specific 2-hyd 96.3 0.054 1.9E-06 57.2 15.0 153 411-595 168-332 (345)
43 1xdw_A NAD+-dependent (R)-2-hy 96.3 0.047 1.6E-06 57.0 14.4 107 411-549 141-254 (331)
44 3evt_A Phosphoglycerate dehydr 96.3 0.039 1.3E-06 57.8 13.7 158 411-598 132-300 (324)
45 3gg9_A D-3-phosphoglycerate de 96.3 0.045 1.5E-06 57.9 14.2 158 411-598 155-324 (352)
46 2ekl_A D-3-phosphoglycerate de 96.3 0.0056 1.9E-07 63.5 7.2 109 411-549 137-252 (313)
47 2ho3_A Oxidoreductase, GFO/IDH 96.3 0.0093 3.2E-07 61.0 8.4 110 417-551 2-117 (325)
48 1p77_A Shikimate 5-dehydrogena 96.3 0.041 1.4E-06 55.5 13.0 130 396-553 103-238 (272)
49 2d0i_A Dehydrogenase; structur 96.2 0.023 8E-07 59.3 11.5 107 412-549 142-255 (333)
50 2gcg_A Glyoxylate reductase/hy 96.2 0.038 1.3E-06 57.5 12.7 109 412-549 151-266 (330)
51 2egg_A AROE, shikimate 5-dehyd 96.2 0.022 7.6E-07 58.4 10.7 132 395-554 123-263 (297)
52 3l07_A Bifunctional protein fo 96.2 0.0093 3.2E-07 61.7 7.8 52 392-448 141-193 (285)
53 3o8q_A Shikimate 5-dehydrogena 96.2 0.049 1.7E-06 55.8 13.2 128 396-551 110-242 (281)
54 2yq5_A D-isomer specific 2-hyd 96.1 0.048 1.6E-06 57.6 13.2 114 411-556 143-264 (343)
55 2g76_A 3-PGDH, D-3-phosphoglyc 96.1 0.066 2.2E-06 56.2 14.2 109 411-549 160-275 (335)
56 1gq2_A Malic enzyme; oxidoredu 96.1 0.028 9.6E-07 62.8 11.8 176 322-532 204-396 (555)
57 1ygy_A PGDH, D-3-phosphoglycer 96.1 0.075 2.6E-06 58.9 15.1 109 411-549 137-252 (529)
58 1tlt_A Putative oxidoreductase 96.1 0.0054 1.8E-07 62.6 5.4 111 416-552 5-121 (319)
59 3pwz_A Shikimate dehydrogenase 96.0 0.062 2.1E-06 54.8 13.2 127 396-549 103-233 (272)
60 3uuw_A Putative oxidoreductase 96.0 0.0093 3.2E-07 60.5 7.0 113 415-553 5-123 (308)
61 1ebf_A Homoserine dehydrogenas 96.0 0.0076 2.6E-07 63.9 6.5 120 417-551 5-140 (358)
62 2ejw_A HDH, homoserine dehydro 96.0 0.0085 2.9E-07 63.0 6.8 83 417-528 4-96 (332)
63 1u8f_O GAPDH, glyceraldehyde-3 96.0 0.03 1E-06 58.8 10.8 103 417-528 4-120 (335)
64 3ba1_A HPPR, hydroxyphenylpyru 95.9 0.1 3.5E-06 54.6 14.6 111 411-555 159-278 (333)
65 3oa2_A WBPB; oxidoreductase, s 95.9 0.015 5.1E-07 60.0 8.1 110 417-551 4-128 (318)
66 3o9z_A Lipopolysaccaride biosy 95.9 0.016 5.3E-07 59.7 8.2 110 417-551 4-127 (312)
67 3k5p_A D-3-phosphoglycerate de 95.9 0.15 5E-06 55.4 16.0 155 411-598 151-321 (416)
68 1dxy_A D-2-hydroxyisocaproate 95.9 0.031 1.1E-06 58.5 10.5 107 411-549 140-253 (333)
69 1obf_O Glyceraldehyde 3-phosph 95.9 0.017 5.9E-07 61.0 8.4 102 417-528 2-121 (335)
70 3euw_A MYO-inositol dehydrogen 95.9 0.016 5.5E-07 59.7 8.1 111 417-553 5-122 (344)
71 3ezy_A Dehydrogenase; structur 95.9 0.009 3.1E-07 61.7 6.1 113 417-553 3-121 (344)
72 3g0o_A 3-hydroxyisobutyrate de 95.9 0.037 1.3E-06 56.2 10.6 109 416-552 7-125 (303)
73 4e21_A 6-phosphogluconate dehy 95.8 0.022 7.5E-07 60.2 9.1 111 414-552 20-138 (358)
74 2dc1_A L-aspartate dehydrogena 95.8 0.017 5.9E-07 56.6 7.7 101 417-550 1-105 (236)
75 4a5o_A Bifunctional protein fo 95.8 0.017 5.8E-07 59.8 7.8 52 392-448 141-193 (286)
76 1gdh_A D-glycerate dehydrogena 95.8 0.13 4.5E-06 53.3 14.6 110 411-549 141-258 (320)
77 2glx_A 1,5-anhydro-D-fructose 95.8 0.018 6.3E-07 58.7 8.0 109 417-552 1-118 (332)
78 3q2i_A Dehydrogenase; rossmann 95.8 0.016 5.5E-07 60.0 7.7 110 416-551 13-130 (354)
79 1pj3_A NAD-dependent malic enz 95.8 0.03 1E-06 62.7 10.2 178 322-532 206-401 (564)
80 4hkt_A Inositol 2-dehydrogenas 95.8 0.018 6E-07 59.1 7.8 111 417-553 4-120 (331)
81 4had_A Probable oxidoreductase 95.8 0.017 5.8E-07 59.5 7.7 113 417-553 24-143 (350)
82 3tnl_A Shikimate dehydrogenase 95.7 0.11 3.7E-06 54.2 13.5 134 396-551 138-283 (315)
83 3m2t_A Probable dehydrogenase; 95.7 0.012 4E-07 61.5 6.3 111 415-552 4-124 (359)
84 3fbt_A Chorismate mutase and s 95.7 0.089 3E-06 54.1 12.7 124 396-552 106-235 (282)
85 3l6d_A Putative oxidoreductase 95.7 0.026 9E-07 57.6 8.7 113 412-553 5-125 (306)
86 3db2_A Putative NADPH-dependen 95.7 0.014 4.7E-07 60.5 6.7 114 416-553 5-123 (354)
87 3e18_A Oxidoreductase; dehydro 95.7 0.017 5.7E-07 60.3 7.2 111 415-551 4-120 (359)
88 1o0s_A NAD-ME, NAD-dependent m 95.6 0.035 1.2E-06 62.5 10.0 176 322-532 242-434 (605)
89 3b1j_A Glyceraldehyde 3-phosph 95.6 0.046 1.6E-06 57.7 10.5 99 417-525 3-117 (339)
90 1dih_A Dihydrodipicolinate red 95.6 0.024 8.3E-07 57.8 8.1 118 415-553 4-128 (273)
91 1a4i_A Methylenetetrahydrofola 95.6 0.02 6.9E-07 59.7 7.5 52 392-448 145-197 (301)
92 2cuk_A Glycerate dehydrogenase 95.6 0.16 5.5E-06 52.5 14.3 37 411-448 139-175 (311)
93 3jyo_A Quinate/shikimate dehyd 95.6 0.11 3.7E-06 53.2 12.9 130 396-551 111-249 (283)
94 1xea_A Oxidoreductase, GFO/IDH 95.6 0.026 8.9E-07 57.7 8.2 110 417-551 3-118 (323)
95 3tum_A Shikimate dehydrogenase 95.6 0.21 7.1E-06 50.9 14.8 129 396-551 109-245 (269)
96 2g1u_A Hypothetical protein TM 95.6 0.066 2.3E-06 48.8 10.1 36 410-445 13-48 (155)
97 2p2s_A Putative oxidoreductase 95.6 0.017 5.9E-07 59.3 6.8 109 416-551 4-121 (336)
98 3u3x_A Oxidoreductase; structu 95.5 0.015 5.1E-07 60.9 6.3 112 416-551 26-143 (361)
99 2d2i_A Glyceraldehyde 3-phosph 95.5 0.051 1.8E-06 58.3 10.5 99 417-525 3-117 (380)
100 3e82_A Putative oxidoreductase 95.5 0.023 8E-07 59.4 7.7 107 416-552 7-123 (364)
101 3d64_A Adenosylhomocysteinase; 95.5 0.031 1E-06 61.9 8.8 108 409-545 270-380 (494)
102 3cea_A MYO-inositol 2-dehydrog 95.5 0.063 2.2E-06 55.0 10.6 112 416-552 8-128 (346)
103 3kux_A Putative oxidoreductase 95.4 0.027 9.3E-07 58.3 7.9 109 417-552 8-123 (352)
104 3rc1_A Sugar 3-ketoreductase; 95.4 0.015 5.2E-07 60.4 6.0 116 414-554 25-147 (350)
105 3e9m_A Oxidoreductase, GFO/IDH 95.4 0.048 1.6E-06 56.1 9.5 115 415-554 4-125 (330)
106 2x5j_O E4PDH, D-erythrose-4-ph 95.4 0.058 2E-06 56.8 10.3 103 417-529 3-123 (339)
107 1rm4_O Glyceraldehyde 3-phosph 95.4 0.069 2.4E-06 56.3 10.8 106 417-532 2-124 (337)
108 3gdo_A Uncharacterized oxidore 95.4 0.02 7E-07 59.6 6.7 110 416-552 5-121 (358)
109 3h9e_O Glyceraldehyde-3-phosph 95.4 0.06 2E-06 57.1 10.2 104 417-529 8-125 (346)
110 3e5r_O PP38, glyceraldehyde-3- 95.4 0.073 2.5E-06 56.0 10.9 106 417-531 4-126 (337)
111 3ce6_A Adenosylhomocysteinase; 95.4 0.058 2E-06 59.7 10.6 92 411-530 269-361 (494)
112 3gvx_A Glycerate dehydrogenase 95.4 0.039 1.3E-06 56.9 8.6 104 412-549 118-229 (290)
113 4fb5_A Probable oxidoreductase 95.4 0.035 1.2E-06 57.2 8.3 94 413-530 22-125 (393)
114 3hg7_A D-isomer specific 2-hyd 95.3 0.055 1.9E-06 56.6 9.8 35 411-445 135-169 (324)
115 2ep7_A GAPDH, glyceraldehyde-3 95.3 0.033 1.1E-06 59.0 8.2 103 417-529 3-120 (342)
116 1nvt_A Shikimate 5'-dehydrogen 95.3 0.11 3.7E-06 52.7 11.7 137 393-553 109-252 (287)
117 3fhl_A Putative oxidoreductase 95.3 0.05 1.7E-06 56.7 9.4 112 415-553 4-122 (362)
118 4dll_A 2-hydroxy-3-oxopropiona 95.3 0.036 1.2E-06 57.0 8.3 112 414-552 29-147 (320)
119 3evn_A Oxidoreductase, GFO/IDH 95.3 0.042 1.4E-06 56.4 8.7 113 415-551 4-122 (329)
120 1v8b_A Adenosylhomocysteinase; 95.3 0.054 1.8E-06 59.7 10.0 97 410-535 251-348 (479)
121 2dbq_A Glyoxylate reductase; D 95.3 0.16 5.3E-06 53.0 13.0 109 411-549 145-260 (334)
122 2h78_A Hibadh, 3-hydroxyisobut 95.3 0.05 1.7E-06 54.8 9.0 115 417-561 4-127 (302)
123 3ond_A Adenosylhomocysteinase; 95.3 0.12 4.1E-06 57.1 12.6 40 408-448 257-296 (488)
124 4gbj_A 6-phosphogluconate dehy 95.3 0.046 1.6E-06 56.0 8.8 107 417-551 6-119 (297)
125 4dgs_A Dehydrogenase; structur 95.3 0.13 4.5E-06 54.1 12.5 151 411-596 166-328 (340)
126 3pef_A 6-phosphogluconate dehy 95.3 0.029 1E-06 56.3 7.2 108 417-552 2-118 (287)
127 3c85_A Putative glutathione-re 95.2 0.079 2.7E-06 49.3 9.6 117 412-550 35-155 (183)
128 3ngx_A Bifunctional protein fo 95.2 0.033 1.1E-06 57.4 7.5 50 392-448 132-182 (276)
129 3pp8_A Glyoxylate/hydroxypyruv 95.2 0.076 2.6E-06 55.3 10.4 108 412-549 135-249 (315)
130 3qy9_A DHPR, dihydrodipicolina 95.2 0.044 1.5E-06 55.2 8.2 101 417-554 4-109 (243)
131 3mtj_A Homoserine dehydrogenas 95.2 0.037 1.3E-06 60.4 8.2 161 415-610 9-198 (444)
132 2d59_A Hypothetical protein PH 95.2 0.15 5.2E-06 46.8 11.2 103 416-551 22-128 (144)
133 2i99_A MU-crystallin homolog; 95.2 0.055 1.9E-06 55.7 9.0 114 413-553 132-249 (312)
134 3cps_A Glyceraldehyde 3-phosph 95.1 0.061 2.1E-06 57.1 9.4 104 417-529 18-136 (354)
135 1ff9_A Saccharopine reductase; 95.1 0.051 1.7E-06 59.1 8.9 120 415-556 2-125 (450)
136 3llv_A Exopolyphosphatase-rela 95.1 0.079 2.7E-06 47.1 8.7 106 415-548 5-117 (141)
137 3fwz_A Inner membrane protein 95.1 0.16 5.3E-06 45.7 10.7 106 417-549 8-120 (140)
138 2g82_O GAPDH, glyceraldehyde-3 95.1 0.056 1.9E-06 56.9 8.8 97 418-524 2-111 (331)
139 3t4e_A Quinate/shikimate dehyd 95.1 0.21 7.2E-06 52.0 13.1 134 396-551 132-277 (312)
140 1edz_A 5,10-methylenetetrahydr 95.0 0.038 1.3E-06 58.0 7.4 58 391-449 147-210 (320)
141 4gqa_A NAD binding oxidoreduct 95.0 0.04 1.4E-06 58.3 7.6 111 417-551 27-151 (412)
142 2c2x_A Methylenetetrahydrofola 94.9 0.033 1.1E-06 57.6 6.5 52 392-448 138-192 (281)
143 3doj_A AT3G25530, dehydrogenas 94.9 0.045 1.5E-06 55.9 7.5 111 414-552 19-138 (310)
144 1y81_A Conserved hypothetical 94.9 0.19 6.4E-06 46.0 10.9 115 414-564 12-130 (138)
145 1lss_A TRK system potassium up 94.9 0.2 6.8E-06 43.6 10.6 32 416-448 4-35 (140)
146 1ydw_A AX110P-like protein; st 94.8 0.03 1E-06 58.1 6.1 113 417-551 7-126 (362)
147 2yyy_A Glyceraldehyde-3-phosph 94.8 0.027 9.1E-07 59.5 5.6 102 417-530 3-113 (343)
148 3don_A Shikimate dehydrogenase 94.8 0.035 1.2E-06 56.8 6.3 50 395-448 100-149 (277)
149 3obb_A Probable 3-hydroxyisobu 94.8 0.074 2.5E-06 54.8 8.7 109 417-551 4-119 (300)
150 3ohs_X Trans-1,2-dihydrobenzen 94.8 0.049 1.7E-06 55.9 7.3 110 417-552 3-122 (334)
151 3f4l_A Putative oxidoreductase 94.7 0.026 8.8E-07 58.3 5.2 107 417-551 3-120 (345)
152 4gwg_A 6-phosphogluconate dehy 94.7 0.058 2E-06 59.4 8.3 117 416-552 4-126 (484)
153 1hdg_O Holo-D-glyceraldehyde-3 94.7 0.13 4.4E-06 54.1 10.4 103 417-529 1-120 (332)
154 3nv9_A Malic enzyme; rossmann 94.7 0.095 3.3E-06 57.6 9.6 180 328-538 149-336 (487)
155 3ijp_A DHPR, dihydrodipicolina 94.7 0.072 2.5E-06 55.1 8.3 118 417-555 22-146 (288)
156 3d1l_A Putative NADP oxidoredu 94.7 0.081 2.8E-06 52.2 8.4 98 412-535 6-106 (266)
157 1gad_O D-glyceraldehyde-3-phos 94.7 0.15 5.1E-06 53.6 10.8 105 417-531 2-120 (330)
158 3pdu_A 3-hydroxyisobutyrate de 94.6 0.042 1.4E-06 55.2 6.3 108 417-552 2-118 (287)
159 2ixa_A Alpha-N-acetylgalactosa 94.6 0.096 3.3E-06 56.2 9.5 115 415-551 19-146 (444)
160 1p9l_A Dihydrodipicolinate red 94.6 0.14 4.9E-06 51.5 10.0 85 417-543 1-87 (245)
161 3pid_A UDP-glucose 6-dehydroge 94.5 0.7 2.4E-05 50.2 16.0 135 410-560 30-183 (432)
162 3c1a_A Putative oxidoreductase 94.5 0.032 1.1E-06 56.8 5.2 107 417-551 11-124 (315)
163 1omo_A Alanine dehydrogenase; 94.5 0.14 4.9E-06 53.0 10.1 112 414-551 123-238 (322)
164 3hja_A GAPDH, glyceraldehyde-3 94.5 0.082 2.8E-06 56.3 8.3 103 416-528 21-142 (356)
165 4f3y_A DHPR, dihydrodipicolina 94.4 0.055 1.9E-06 55.3 6.7 117 416-554 7-130 (272)
166 3qha_A Putative oxidoreductase 94.4 0.036 1.2E-06 56.3 5.3 106 417-551 16-127 (296)
167 3phh_A Shikimate dehydrogenase 94.4 0.25 8.7E-06 50.4 11.5 119 395-552 105-229 (269)
168 2b4r_O Glyceraldehyde-3-phosph 94.4 0.13 4.4E-06 54.6 9.6 108 413-529 8-130 (345)
169 3bio_A Oxidoreductase, GFO/IDH 94.3 0.15 5.3E-06 52.2 9.8 107 416-551 9-121 (304)
170 3cmc_O GAPDH, glyceraldehyde-3 94.3 0.11 3.7E-06 54.7 8.8 103 417-529 2-119 (334)
171 2zyd_A 6-phosphogluconate dehy 94.2 0.098 3.4E-06 57.3 8.5 118 413-552 12-136 (480)
172 2duw_A Putative COA-binding pr 94.2 0.34 1.2E-05 44.5 10.9 112 416-564 13-131 (145)
173 3ic5_A Putative saccharopine d 94.2 0.22 7.6E-06 41.9 9.0 33 415-448 4-37 (118)
174 2czc_A Glyceraldehyde-3-phosph 94.2 0.024 8.3E-07 59.1 3.5 98 417-531 3-111 (334)
175 3mz0_A Inositol 2-dehydrogenas 94.2 0.15 5.2E-06 52.4 9.5 111 417-550 3-120 (344)
176 2dvm_A Malic enzyme, 439AA lon 94.2 0.095 3.2E-06 57.2 8.2 134 402-551 172-315 (439)
177 4ew6_A D-galactose-1-dehydroge 94.1 0.061 2.1E-06 55.6 6.3 87 413-530 22-112 (330)
178 1h6d_A Precursor form of gluco 94.1 0.095 3.2E-06 56.3 7.9 115 415-552 82-206 (433)
179 3doc_A Glyceraldehyde 3-phosph 94.1 0.14 4.9E-06 54.0 9.0 101 417-527 3-119 (335)
180 1f06_A MESO-diaminopimelate D- 94.1 0.076 2.6E-06 54.8 6.9 94 416-539 3-98 (320)
181 4h3v_A Oxidoreductase domain p 94.0 0.1 3.4E-06 53.7 7.7 115 414-552 4-134 (390)
182 3i23_A Oxidoreductase, GFO/IDH 94.0 0.083 2.8E-06 54.7 7.1 112 417-552 3-121 (349)
183 3moi_A Probable dehydrogenase; 93.9 0.076 2.6E-06 55.8 6.6 107 417-551 3-119 (387)
184 1sc6_A PGDH, D-3-phosphoglycer 93.8 0.25 8.4E-06 53.2 10.5 106 411-549 140-253 (404)
185 3ec7_A Putative dehydrogenase; 93.8 0.076 2.6E-06 55.3 6.4 112 413-550 20-141 (357)
186 3kb6_A D-lactate dehydrogenase 93.8 0.066 2.3E-06 56.1 5.8 108 411-549 136-250 (334)
187 3keo_A Redox-sensing transcrip 93.8 0.042 1.4E-06 54.5 4.1 109 321-448 6-118 (212)
188 3b1f_A Putative prephenate deh 93.7 0.23 8E-06 49.5 9.6 112 416-553 6-125 (290)
189 3abi_A Putative uncharacterize 93.7 0.35 1.2E-05 50.4 11.3 118 412-554 10-132 (365)
190 1b7g_O Protein (glyceraldehyde 93.7 0.089 3.1E-06 55.2 6.7 100 417-532 2-110 (340)
191 1zh8_A Oxidoreductase; TM0312, 93.6 0.16 5.3E-06 52.5 8.3 110 415-551 17-137 (340)
192 1x7d_A Ornithine cyclodeaminas 93.6 0.17 5.8E-06 53.3 8.7 116 414-555 127-250 (350)
193 1nvm_B Acetaldehyde dehydrogen 93.6 0.044 1.5E-06 56.9 4.1 93 416-531 4-105 (312)
194 2z2v_A Hypothetical protein PH 93.5 0.22 7.5E-06 52.6 9.4 116 413-555 13-133 (365)
195 3upl_A Oxidoreductase; rossman 93.5 0.079 2.7E-06 57.9 6.1 129 415-555 22-166 (446)
196 3pym_A GAPDH 3, glyceraldehyde 93.5 0.33 1.1E-05 51.3 10.5 102 417-527 2-117 (332)
197 2axq_A Saccharopine dehydrogen 93.4 0.09 3.1E-06 57.5 6.4 125 410-556 17-145 (467)
198 1xyg_A Putative N-acetyl-gamma 93.4 0.24 8.3E-06 52.3 9.5 99 415-533 15-115 (359)
199 3lvf_P GAPDH 1, glyceraldehyde 93.4 0.25 8.5E-06 52.3 9.4 101 417-527 5-119 (338)
200 3l9w_A Glutathione-regulated p 93.4 0.39 1.3E-05 51.7 11.1 149 416-597 4-160 (413)
201 4dib_A GAPDH, glyceraldehyde 3 93.4 0.2 6.7E-06 53.2 8.6 101 417-527 5-119 (345)
202 1cf2_P Protein (glyceraldehyde 93.3 0.048 1.7E-06 57.2 3.9 104 417-532 2-111 (337)
203 1npy_A Hypothetical shikimate 93.3 1.1 3.8E-05 45.4 13.8 128 394-554 102-236 (271)
204 3qsg_A NAD-binding phosphogluc 93.2 0.16 5.4E-06 52.1 7.5 110 416-552 24-142 (312)
205 1iuk_A Hypothetical protein TT 93.1 0.3 1E-05 44.7 8.5 112 416-563 13-130 (140)
206 3cky_A 2-hydroxymethyl glutara 93.0 0.22 7.6E-06 49.8 8.1 107 417-551 5-120 (301)
207 2cvz_A Dehydrogenase, 3-hydrox 92.9 0.34 1.2E-05 47.9 9.2 107 417-552 2-113 (289)
208 1lc0_A Biliverdin reductase A; 92.8 0.12 4.2E-06 52.4 6.0 103 416-551 7-120 (294)
209 2ozp_A N-acetyl-gamma-glutamyl 92.8 0.42 1.4E-05 50.2 10.1 95 417-532 5-101 (345)
210 4fn4_A Short chain dehydrogena 92.7 1.1 3.7E-05 45.1 12.7 36 412-448 3-39 (254)
211 4ezb_A Uncharacterized conserv 92.6 0.39 1.3E-05 49.4 9.3 112 417-552 25-144 (317)
212 1pgj_A 6PGDH, 6-PGDH, 6-phosph 92.5 0.17 5.8E-06 55.3 7.0 118 417-552 2-126 (478)
213 1kyq_A Met8P, siroheme biosynt 92.4 0.091 3.1E-06 53.9 4.3 36 412-447 9-44 (274)
214 3v1y_O PP38, glyceraldehyde-3- 92.2 0.4 1.4E-05 50.7 9.0 102 417-527 4-121 (337)
215 2p4q_A 6-phosphogluconate dehy 92.2 0.27 9.4E-06 54.1 8.1 115 416-551 10-131 (497)
216 2nu8_A Succinyl-COA ligase [AD 92.1 0.46 1.6E-05 48.5 9.2 110 416-554 7-123 (288)
217 1j5p_A Aspartate dehydrogenase 92.1 0.25 8.4E-06 50.3 7.1 79 416-530 12-91 (253)
218 3u62_A Shikimate dehydrogenase 92.1 0.17 5.7E-06 51.0 5.8 46 396-448 95-140 (253)
219 1lu9_A Methylene tetrahydromet 92.1 0.22 7.4E-06 50.2 6.6 50 395-448 101-151 (287)
220 3btv_A Galactose/lactose metab 92.0 0.15 5.2E-06 54.7 5.7 113 415-552 19-151 (438)
221 3dty_A Oxidoreductase, GFO/IDH 92.0 0.2 6.8E-06 52.8 6.5 117 414-552 10-141 (398)
222 2iz1_A 6-phosphogluconate dehy 91.9 0.25 8.6E-06 53.8 7.4 114 417-552 6-126 (474)
223 3two_A Mannitol dehydrogenase; 91.9 0.6 2E-05 48.0 9.8 33 414-446 175-207 (348)
224 2pgd_A 6-phosphogluconate dehy 91.8 0.32 1.1E-05 53.1 8.0 114 417-551 3-123 (482)
225 1vpd_A Tartronate semialdehyde 91.8 0.41 1.4E-05 47.8 8.2 107 417-551 6-121 (299)
226 1qp8_A Formate dehydrogenase; 91.7 0.17 5.8E-06 52.2 5.5 35 413-448 121-155 (303)
227 3oj0_A Glutr, glutamyl-tRNA re 91.7 0.099 3.4E-06 47.0 3.3 32 416-448 21-52 (144)
228 3v5n_A Oxidoreductase; structu 91.7 0.38 1.3E-05 51.2 8.3 117 414-552 35-166 (417)
229 3dfz_A SIRC, precorrin-2 dehyd 91.7 0.11 3.7E-06 51.8 3.8 35 412-446 27-61 (223)
230 1j4a_A D-LDH, D-lactate dehydr 91.7 0.13 4.4E-06 53.7 4.5 107 411-549 141-255 (333)
231 1yqg_A Pyrroline-5-carboxylate 91.6 0.6 2E-05 45.7 9.0 89 417-534 1-91 (263)
232 1oi7_A Succinyl-COA synthetase 91.4 0.38 1.3E-05 49.3 7.6 108 416-551 7-119 (288)
233 4huj_A Uncharacterized protein 91.3 0.22 7.5E-06 48.3 5.4 32 417-448 24-55 (220)
234 1l7d_A Nicotinamide nucleotide 91.3 0.28 9.5E-06 51.9 6.6 35 413-448 169-203 (384)
235 1bg6_A N-(1-D-carboxylethyl)-L 91.2 0.82 2.8E-05 46.5 9.9 112 417-547 5-126 (359)
236 2nvw_A Galactose/lactose metab 91.1 0.33 1.1E-05 53.0 7.2 111 416-551 39-170 (479)
237 2hmt_A YUAA protein; RCK, KTN, 91.1 0.16 5.5E-06 44.3 3.9 32 414-445 4-35 (144)
238 3l4b_C TRKA K+ channel protien 90.9 1 3.5E-05 43.1 9.7 31 417-448 1-31 (218)
239 2vt3_A REX, redox-sensing tran 90.7 0.21 7.1E-06 49.4 4.6 111 319-448 5-119 (215)
240 1id1_A Putative potassium chan 90.5 0.24 8.2E-06 44.8 4.6 33 415-447 2-34 (153)
241 1dlj_A UDP-glucose dehydrogena 90.4 0.41 1.4E-05 50.9 7.0 123 417-555 1-143 (402)
242 2ahr_A Putative pyrroline carb 90.2 0.45 1.6E-05 46.6 6.7 101 417-547 4-105 (259)
243 4ina_A Saccharopine dehydrogen 90.2 0.53 1.8E-05 50.1 7.6 122 417-556 2-142 (405)
244 1ys4_A Aspartate-semialdehyde 90.2 0.67 2.3E-05 48.6 8.3 100 417-531 9-115 (354)
245 4eye_A Probable oxidoreductase 90.0 2.1 7.1E-05 43.9 11.7 35 413-447 157-192 (342)
246 3uog_A Alcohol dehydrogenase; 89.9 1.5 5.3E-05 45.3 10.7 34 414-447 188-221 (363)
247 3ggo_A Prephenate dehydrogenas 89.7 1.2 4E-05 45.9 9.6 34 414-448 31-66 (314)
248 4b4u_A Bifunctional protein fo 89.7 0.6 2.1E-05 48.7 7.3 52 392-448 159-211 (303)
249 1z82_A Glycerol-3-phosphate de 89.7 8 0.00027 39.4 15.8 98 416-533 14-113 (335)
250 2gf2_A Hibadh, 3-hydroxyisobut 89.6 0.66 2.2E-05 46.2 7.4 31 417-448 1-31 (296)
251 3ids_C GAPDH, glyceraldehyde-3 89.5 0.95 3.3E-05 48.2 8.8 103 417-528 3-133 (359)
252 3dtt_A NADP oxidoreductase; st 89.3 0.33 1.1E-05 47.8 4.9 38 410-448 13-50 (245)
253 2uyy_A N-PAC protein; long-cha 89.2 0.59 2E-05 47.3 6.7 31 417-448 31-61 (316)
254 3c24_A Putative oxidoreductase 89.1 1.3 4.4E-05 44.2 9.1 90 417-534 12-104 (286)
255 4e12_A Diketoreductase; oxidor 88.9 0.45 1.5E-05 47.8 5.6 31 417-448 5-35 (283)
256 3gg2_A Sugar dehydrogenase, UD 88.7 1.6 5.3E-05 47.4 10.1 31 417-448 3-33 (450)
257 3e8x_A Putative NAD-dependent 88.7 0.43 1.5E-05 45.6 5.1 36 412-447 17-53 (236)
258 2vhw_A Alanine dehydrogenase; 88.5 0.44 1.5E-05 50.4 5.4 35 413-448 165-199 (377)
259 3ojo_A CAP5O; rossmann fold, c 88.5 4.5 0.00015 43.8 13.4 33 415-448 10-42 (431)
260 3ip3_A Oxidoreductase, putativ 88.5 0.25 8.5E-06 50.7 3.4 112 417-549 3-120 (337)
261 4gmf_A Yersiniabactin biosynth 88.4 1.3 4.5E-05 46.9 9.1 106 416-551 7-123 (372)
262 1yb4_A Tartronic semialdehyde 88.4 0.42 1.4E-05 47.5 4.9 107 417-551 4-118 (295)
263 3p2y_A Alanine dehydrogenase/p 88.4 0.62 2.1E-05 50.0 6.5 35 413-448 181-215 (381)
264 4dio_A NAD(P) transhydrogenase 88.3 0.67 2.3E-05 50.1 6.7 35 413-448 187-221 (405)
265 1pjq_A CYSG, siroheme synthase 88.0 0.44 1.5E-05 51.8 5.1 36 412-447 8-43 (457)
266 3ip1_A Alcohol dehydrogenase, 87.9 3.5 0.00012 43.3 12.0 34 413-446 211-245 (404)
267 2f1k_A Prephenate dehydrogenas 87.9 3 0.0001 41.0 10.8 31 417-448 1-31 (279)
268 2eez_A Alanine dehydrogenase; 87.9 0.77 2.6E-05 48.1 6.8 35 413-448 163-197 (369)
269 1x13_A NAD(P) transhydrogenase 87.6 0.43 1.5E-05 51.1 4.7 35 413-448 169-203 (401)
270 2nqt_A N-acetyl-gamma-glutamyl 87.6 1 3.5E-05 47.5 7.6 98 416-533 9-113 (352)
271 3lk7_A UDP-N-acetylmuramoylala 87.5 0.5 1.7E-05 50.9 5.2 37 412-449 5-41 (451)
272 3tri_A Pyrroline-5-carboxylate 87.4 1.8 6E-05 43.7 8.9 32 416-448 3-37 (280)
273 3gt0_A Pyrroline-5-carboxylate 86.9 1.1 3.8E-05 43.8 6.9 31 417-448 3-37 (247)
274 4a7p_A UDP-glucose dehydrogena 86.8 5.4 0.00019 43.3 12.9 32 416-448 8-39 (446)
275 2r00_A Aspartate-semialdehyde 86.8 0.9 3.1E-05 47.4 6.5 92 416-532 3-98 (336)
276 2ep5_A 350AA long hypothetical 86.7 0.99 3.4E-05 47.3 6.8 101 417-532 5-110 (350)
277 1yqd_A Sinapyl alcohol dehydro 86.7 1.4 4.9E-05 45.6 8.0 43 405-447 177-219 (366)
278 4iin_A 3-ketoacyl-acyl carrier 86.7 0.78 2.7E-05 45.2 5.7 54 395-448 7-62 (271)
279 1gpj_A Glutamyl-tRNA reductase 86.6 0.68 2.3E-05 49.3 5.6 114 413-554 164-289 (404)
280 1jw9_B Molybdopterin biosynthe 86.5 0.31 1.1E-05 48.6 2.7 36 414-449 29-64 (249)
281 3eag_A UDP-N-acetylmuramate:L- 86.4 2.3 7.8E-05 43.7 9.2 33 416-449 4-37 (326)
282 1t4b_A Aspartate-semialdehyde 86.3 0.33 1.1E-05 51.6 2.9 90 417-531 2-98 (367)
283 1mv8_A GMD, GDP-mannose 6-dehy 86.1 2.6 8.9E-05 45.1 9.8 31 417-448 1-31 (436)
284 2izz_A Pyrroline-5-carboxylate 86.0 2.6 8.9E-05 43.1 9.4 105 415-545 21-132 (322)
285 4fs3_A Enoyl-[acyl-carrier-pro 85.9 0.94 3.2E-05 44.7 5.8 36 412-448 2-40 (256)
286 3gpi_A NAD-dependent epimerase 85.9 0.62 2.1E-05 45.8 4.5 34 415-448 2-35 (286)
287 2raf_A Putative dinucleotide-b 85.9 0.79 2.7E-05 44.1 5.1 37 411-448 14-50 (209)
288 1zej_A HBD-9, 3-hydroxyacyl-CO 85.9 2.9 9.8E-05 43.0 9.6 76 415-511 11-86 (293)
289 2hq1_A Glucose/ribitol dehydro 85.8 0.99 3.4E-05 43.2 5.8 36 413-448 2-38 (247)
290 2rcy_A Pyrroline carboxylate r 85.7 1.3 4.3E-05 43.3 6.5 32 416-448 4-39 (262)
291 1r0k_A 1-deoxy-D-xylulose 5-ph 85.6 2.3 8E-05 45.7 9.0 122 417-553 5-149 (388)
292 2yv2_A Succinyl-COA synthetase 85.2 2.4 8.3E-05 43.5 8.7 106 416-551 13-126 (297)
293 3oqb_A Oxidoreductase; structu 85.1 0.93 3.2E-05 47.2 5.6 115 415-553 5-140 (383)
294 2cf5_A Atccad5, CAD, cinnamyl 85.1 1.7 5.6E-05 44.9 7.4 42 406-447 171-212 (357)
295 3ff4_A Uncharacterized protein 85.0 5.8 0.0002 35.6 10.1 107 417-561 5-115 (122)
296 3h8v_A Ubiquitin-like modifier 85.0 0.54 1.9E-05 48.5 3.7 52 397-448 12-68 (292)
297 2o3j_A UDP-glucose 6-dehydroge 84.8 2.6 9E-05 45.9 9.2 31 417-448 10-42 (481)
298 2hjs_A USG-1 protein homolog; 84.8 1.1 3.8E-05 46.8 6.0 89 417-532 7-101 (340)
299 1cyd_A Carbonyl reductase; sho 84.8 1.1 3.9E-05 42.7 5.6 35 412-446 3-38 (244)
300 2aef_A Calcium-gated potassium 84.6 1.3 4.6E-05 42.6 6.1 109 416-553 9-126 (234)
301 1zud_1 Adenylyltransferase THI 84.5 0.64 2.2E-05 46.4 3.9 36 414-449 26-61 (251)
302 3o38_A Short chain dehydrogena 84.4 1.1 3.8E-05 43.7 5.5 34 413-446 19-54 (266)
303 3g79_A NDP-N-acetyl-D-galactos 84.4 4.9 0.00017 44.1 11.1 31 417-448 19-51 (478)
304 2yv3_A Aspartate-semialdehyde 84.3 0.48 1.6E-05 49.5 2.9 92 418-532 2-94 (331)
305 3uko_A Alcohol dehydrogenase c 84.1 1.9 6.7E-05 44.7 7.5 32 414-445 192-224 (378)
306 3kkj_A Amine oxidase, flavin-c 84.1 0.92 3.1E-05 41.0 4.4 30 418-448 4-33 (336)
307 2pnf_A 3-oxoacyl-[acyl-carrier 84.1 1.2 4E-05 42.6 5.4 35 412-446 3-38 (248)
308 2q3e_A UDP-glucose 6-dehydroge 84.0 3.1 0.00011 45.0 9.3 31 417-448 6-38 (467)
309 3ai3_A NADPH-sorbose reductase 83.9 1.3 4.5E-05 43.2 5.8 35 412-446 3-38 (263)
310 4dpk_A Malonyl-COA/succinyl-CO 83.8 2.2 7.6E-05 45.1 7.9 104 416-532 7-112 (359)
311 4dpl_A Malonyl-COA/succinyl-CO 83.8 2.2 7.6E-05 45.1 7.9 104 416-532 7-112 (359)
312 1pqw_A Polyketide synthase; ro 83.7 1.8 6.3E-05 40.2 6.5 33 414-446 37-70 (198)
313 1u7z_A Coenzyme A biosynthesis 83.6 1.4 4.7E-05 44.0 5.8 36 413-448 5-57 (226)
314 4gkb_A 3-oxoacyl-[acyl-carrier 83.6 1.5 5.1E-05 44.1 6.1 37 411-447 2-39 (258)
315 3edm_A Short chain dehydrogena 83.6 1.4 4.9E-05 43.1 5.9 37 412-448 4-41 (259)
316 3oig_A Enoyl-[acyl-carrier-pro 83.5 1.4 5E-05 42.9 5.9 35 412-446 3-40 (266)
317 2yv1_A Succinyl-COA ligase [AD 83.4 2.3 7.7E-05 43.6 7.5 105 417-551 14-125 (294)
318 3lyl_A 3-oxoacyl-(acyl-carrier 83.4 1.3 4.4E-05 42.7 5.4 35 413-447 2-37 (247)
319 3d3w_A L-xylulose reductase; u 83.3 1.5 5E-05 42.0 5.8 35 412-446 3-38 (244)
320 2pd6_A Estradiol 17-beta-dehyd 83.2 1.5 5.1E-05 42.4 5.8 35 412-446 3-38 (264)
321 2h7i_A Enoyl-[acyl-carrier-pro 82.9 1.4 4.7E-05 43.4 5.5 33 413-445 4-39 (269)
322 3awd_A GOX2181, putative polyo 82.8 1.4 4.9E-05 42.4 5.5 34 413-446 10-44 (260)
323 2wsb_A Galactitol dehydrogenas 82.8 1.4 5E-05 42.2 5.5 35 412-446 7-42 (254)
324 2cdc_A Glucose dehydrogenase g 82.7 0.97 3.3E-05 46.8 4.5 32 416-447 181-212 (366)
325 1hdo_A Biliverdin IX beta redu 82.7 1.5 5.2E-05 40.1 5.4 33 415-447 2-35 (206)
326 4h15_A Short chain alcohol deh 82.6 1.4 4.7E-05 44.3 5.4 36 412-447 7-43 (261)
327 3goh_A Alcohol dehydrogenase, 82.4 1.9 6.6E-05 43.4 6.5 34 413-446 140-173 (315)
328 3qiv_A Short-chain dehydrogena 82.4 1.6 5.4E-05 42.2 5.6 34 412-445 5-39 (253)
329 2z1n_A Dehydrogenase; reductas 82.2 1.7 5.7E-05 42.5 5.8 34 412-445 3-37 (260)
330 3dr3_A N-acetyl-gamma-glutamyl 82.1 2.3 7.8E-05 44.7 7.1 102 417-533 5-109 (337)
331 3hdj_A Probable ornithine cycl 82.1 4.2 0.00014 42.0 8.9 115 415-554 120-237 (313)
332 1o5i_A 3-oxoacyl-(acyl carrier 82.0 1.6 5.5E-05 42.5 5.5 35 412-446 15-50 (249)
333 3h7a_A Short chain dehydrogena 82.0 1.5 5.2E-05 42.9 5.4 36 412-448 3-39 (252)
334 2c29_D Dihydroflavonol 4-reduc 82.0 1.3 4.3E-05 44.5 4.9 34 414-447 3-37 (337)
335 2o23_A HADH2 protein; HSD17B10 81.9 1.7 5.8E-05 42.0 5.6 35 412-446 8-43 (265)
336 2pzm_A Putative nucleotide sug 81.8 1.3 4.3E-05 44.7 4.8 36 412-447 16-52 (330)
337 3pwk_A Aspartate-semialdehyde 81.7 1.7 5.8E-05 46.2 6.0 90 416-532 2-97 (366)
338 1zk4_A R-specific alcohol dehy 81.6 1.6 5.4E-05 41.9 5.2 34 413-446 3-37 (251)
339 4g81_D Putative hexonate dehyd 81.6 1.4 4.8E-05 44.3 5.1 35 413-448 6-41 (255)
340 1zsy_A Mitochondrial 2-enoyl t 81.5 2.6 8.8E-05 43.4 7.2 35 414-448 166-201 (357)
341 2ew8_A (S)-1-phenylethanol deh 81.5 1.8 6E-05 42.1 5.6 35 412-446 3-38 (249)
342 3i1j_A Oxidoreductase, short c 81.5 1.7 5.6E-05 41.8 5.3 35 412-446 10-45 (247)
343 2fp4_A Succinyl-COA ligase [GD 81.4 1.9 6.4E-05 44.6 6.0 108 414-551 11-127 (305)
344 3svt_A Short-chain type dehydr 81.4 1.7 5.7E-05 43.0 5.5 37 411-448 6-43 (281)
345 4dry_A 3-oxoacyl-[acyl-carrier 81.3 1.3 4.3E-05 44.3 4.6 41 406-446 23-64 (281)
346 2z1m_A GDP-D-mannose dehydrata 81.3 1.4 4.8E-05 43.9 4.9 34 414-447 1-35 (345)
347 1nff_A Putative oxidoreductase 81.3 1.9 6.4E-05 42.3 5.8 34 412-445 3-37 (260)
348 1ja9_A 4HNR, 1,3,6,8-tetrahydr 81.3 1.6 5.5E-05 42.3 5.2 36 412-447 17-53 (274)
349 3tz6_A Aspartate-semialdehyde 81.2 2.3 7.9E-05 44.8 6.7 90 416-532 1-96 (344)
350 4a2c_A Galactitol-1-phosphate 81.2 3 0.0001 42.3 7.5 37 412-448 157-193 (346)
351 1d7o_A Enoyl-[acyl-carrier pro 81.1 2 6.8E-05 42.8 6.0 35 412-446 4-41 (297)
352 2h6e_A ADH-4, D-arabinose 1-de 81.1 2.5 8.5E-05 43.2 6.8 32 415-446 170-203 (344)
353 1sby_A Alcohol dehydrogenase; 81.1 1.6 5.5E-05 42.3 5.1 36 413-448 2-38 (254)
354 3tpc_A Short chain alcohol deh 81.1 1.8 6.1E-05 42.2 5.5 35 412-446 3-38 (257)
355 3uf0_A Short-chain dehydrogena 81.0 2 6.7E-05 42.7 5.8 35 412-446 27-62 (273)
356 2fwm_X 2,3-dihydro-2,3-dihydro 81.0 1.9 6.5E-05 41.9 5.6 36 412-447 3-39 (250)
357 3rd5_A Mypaa.01249.C; ssgcid, 80.9 1.9 6.4E-05 42.9 5.7 35 412-446 12-47 (291)
358 3vps_A TUNA, NAD-dependent epi 80.8 1.3 4.6E-05 43.5 4.6 36 413-448 4-40 (321)
359 2ae2_A Protein (tropinone redu 80.8 1.9 6.6E-05 42.0 5.7 35 412-446 5-40 (260)
360 1h5q_A NADP-dependent mannitol 80.8 1.5 5.3E-05 42.2 4.9 36 412-447 10-46 (265)
361 3n74_A 3-ketoacyl-(acyl-carrie 80.8 1.9 6.6E-05 41.8 5.6 35 412-446 5-40 (261)
362 2bgk_A Rhizome secoisolaricire 80.8 1.9 6.6E-05 41.9 5.6 34 412-445 12-46 (278)
363 1fmc_A 7 alpha-hydroxysteroid 80.7 1.5 5.2E-05 42.0 4.8 35 412-446 7-42 (255)
364 1zem_A Xylitol dehydrogenase; 80.7 1.9 6.6E-05 42.1 5.6 34 412-445 3-37 (262)
365 2q2v_A Beta-D-hydroxybutyrate 80.7 1.6 5.6E-05 42.4 5.1 35 413-448 1-36 (255)
366 3afn_B Carbonyl reductase; alp 80.6 1.5 5E-05 42.1 4.6 35 413-447 4-39 (258)
367 1w6u_A 2,4-dienoyl-COA reducta 80.6 1.9 6.5E-05 42.7 5.6 35 412-446 22-57 (302)
368 2dt5_A AT-rich DNA-binding pro 80.5 0.96 3.3E-05 44.4 3.3 161 323-529 4-170 (211)
369 3rwb_A TPLDH, pyridoxal 4-dehy 80.5 1.9 6.4E-05 42.0 5.4 36 412-448 2-38 (247)
370 3vtz_A Glucose 1-dehydrogenase 80.4 1.8 6.2E-05 42.8 5.4 36 411-446 9-45 (269)
371 3tzq_B Short-chain type dehydr 80.4 2 6.7E-05 42.4 5.6 36 412-448 7-43 (271)
372 1vl8_A Gluconate 5-dehydrogena 80.4 2 6.8E-05 42.4 5.6 36 411-446 16-52 (267)
373 3nrc_A Enoyl-[acyl-carrier-pro 80.2 2 6.9E-05 42.5 5.6 34 413-446 23-59 (280)
374 3op4_A 3-oxoacyl-[acyl-carrier 80.2 1.9 6.6E-05 41.9 5.4 35 412-446 5-40 (248)
375 2zat_A Dehydrogenase/reductase 80.1 1.9 6.7E-05 41.9 5.4 35 412-446 10-45 (260)
376 3ius_A Uncharacterized conserv 80.1 1.3 4.6E-05 43.2 4.2 33 416-448 5-37 (286)
377 4id9_A Short-chain dehydrogena 80.1 1.3 4.3E-05 44.6 4.1 37 412-448 15-52 (347)
378 3ado_A Lambda-crystallin; L-gu 80.1 1.1 3.6E-05 46.9 3.6 32 416-448 6-37 (319)
379 3t4x_A Oxidoreductase, short c 80.0 1.9 6.7E-05 42.3 5.4 36 410-445 4-40 (267)
380 3ak4_A NADH-dependent quinucli 80.0 2.1 7.2E-05 41.7 5.6 34 412-445 8-42 (263)
381 2x5o_A UDP-N-acetylmuramoylala 80.0 0.89 3E-05 48.7 3.1 37 413-450 2-38 (439)
382 3pxx_A Carveol dehydrogenase; 80.0 2.1 7.1E-05 42.1 5.6 33 413-445 7-40 (287)
383 2ywl_A Thioredoxin reductase r 80.0 6.2 0.00021 35.8 8.5 31 417-448 2-32 (180)
384 1xq6_A Unknown protein; struct 80.0 2.1 7.3E-05 40.4 5.5 34 414-447 2-38 (253)
385 3rkr_A Short chain oxidoreduct 79.9 1.9 6.4E-05 42.2 5.2 33 413-445 26-59 (262)
386 3imf_A Short chain dehydrogena 79.9 1.9 6.4E-05 42.2 5.2 35 413-448 3-38 (257)
387 3e03_A Short chain dehydrogena 79.9 2.1 7.2E-05 42.3 5.6 35 412-446 2-37 (274)
388 1y1p_A ARII, aldehyde reductas 79.9 1.9 6.5E-05 42.8 5.3 35 413-447 8-43 (342)
389 4a7p_A UDP-glucose dehydrogena 79.8 6.4 0.00022 42.7 9.8 119 402-550 308-437 (446)
390 3ioy_A Short-chain dehydrogena 79.8 2.2 7.4E-05 43.5 5.8 35 412-446 4-39 (319)
391 3ucx_A Short chain dehydrogena 79.8 2.3 7.8E-05 41.7 5.8 36 411-446 6-42 (264)
392 3s2e_A Zinc-containing alcohol 79.7 3 0.0001 42.5 6.9 34 414-447 165-198 (340)
393 3zv4_A CIS-2,3-dihydrobiphenyl 79.7 2.1 7.3E-05 42.5 5.6 34 413-446 2-36 (281)
394 1yb1_A 17-beta-hydroxysteroid 79.7 2.2 7.4E-05 42.0 5.6 35 412-446 27-62 (272)
395 1hdc_A 3-alpha, 20 beta-hydrox 79.7 2.1 7.3E-05 41.7 5.5 33 413-445 2-35 (254)
396 4b7c_A Probable oxidoreductase 79.6 3.7 0.00013 41.6 7.5 35 413-447 147-182 (336)
397 3f1l_A Uncharacterized oxidore 79.6 2.2 7.6E-05 41.5 5.6 34 412-445 8-42 (252)
398 1xg5_A ARPG836; short chain de 79.6 1.8 6.1E-05 42.6 5.0 34 413-446 29-63 (279)
399 1xq1_A Putative tropinone redu 79.6 2 6.8E-05 41.7 5.2 35 412-446 10-45 (266)
400 1np3_A Ketol-acid reductoisome 79.6 1 3.5E-05 46.7 3.3 34 414-448 14-47 (338)
401 1uls_A Putative 3-oxoacyl-acyl 79.6 2.3 7.7E-05 41.3 5.6 34 413-446 2-36 (245)
402 3r1i_A Short-chain type dehydr 79.5 2.1 7.2E-05 42.6 5.5 35 412-446 28-63 (276)
403 2d1y_A Hypothetical protein TT 79.5 2.2 7.6E-05 41.5 5.6 34 413-446 3-37 (256)
404 3s55_A Putative short-chain de 79.5 2.1 7.2E-05 42.2 5.5 34 413-446 7-41 (281)
405 4eso_A Putative oxidoreductase 79.4 2.2 7.4E-05 41.8 5.5 34 413-446 5-39 (255)
406 3sx2_A Putative 3-ketoacyl-(ac 79.4 2.2 7.7E-05 41.9 5.6 34 412-445 9-43 (278)
407 3qwb_A Probable quinone oxidor 79.4 3.7 0.00013 41.7 7.4 35 413-447 146-181 (334)
408 3pk0_A Short-chain dehydrogena 79.4 2 6.9E-05 42.2 5.3 34 412-445 6-40 (262)
409 2uvd_A 3-oxoacyl-(acyl-carrier 79.2 2 6.9E-05 41.5 5.1 35 413-447 1-36 (246)
410 2wyu_A Enoyl-[acyl carrier pro 79.1 2 6.8E-05 42.0 5.1 35 412-446 4-41 (261)
411 3nyw_A Putative oxidoreductase 79.1 1.8 6.2E-05 42.3 4.8 35 412-446 3-38 (250)
412 4e6p_A Probable sorbitol dehyd 79.1 2.4 8.1E-05 41.4 5.6 34 412-445 4-38 (259)
413 2pd4_A Enoyl-[acyl-carrier-pro 79.1 2.1 7.2E-05 42.2 5.3 34 413-446 3-39 (275)
414 3k31_A Enoyl-(acyl-carrier-pro 79.1 2.4 8.2E-05 42.5 5.8 36 412-448 26-64 (296)
415 3v2g_A 3-oxoacyl-[acyl-carrier 79.1 2.6 8.9E-05 41.8 6.0 36 412-447 27-63 (271)
416 3pgx_A Carveol dehydrogenase; 79.0 2.3 8E-05 42.0 5.6 35 412-446 11-46 (280)
417 1iy8_A Levodione reductase; ox 78.9 2.3 7.8E-05 41.6 5.5 34 412-445 9-43 (267)
418 3ftp_A 3-oxoacyl-[acyl-carrier 78.9 2.2 7.5E-05 42.3 5.4 36 411-446 23-59 (270)
419 3u9l_A 3-oxoacyl-[acyl-carrier 78.9 4.1 0.00014 41.7 7.6 49 413-467 2-51 (324)
420 3p19_A BFPVVD8, putative blue 78.9 1.9 6.5E-05 42.7 4.9 37 410-446 10-47 (266)
421 1gee_A Glucose 1-dehydrogenase 78.8 1.8 6.1E-05 41.8 4.6 35 413-447 4-39 (261)
422 1pjc_A Protein (L-alanine dehy 78.8 1.9 6.7E-05 45.0 5.2 35 413-448 164-198 (361)
423 1uuf_A YAHK, zinc-type alcohol 78.8 4.3 0.00015 42.2 7.8 33 415-447 194-226 (369)
424 3f9i_A 3-oxoacyl-[acyl-carrier 78.7 2.2 7.6E-05 41.0 5.3 36 411-446 9-45 (249)
425 2ag5_A DHRS6, dehydrogenase/re 78.7 2.2 7.5E-05 41.3 5.2 34 413-446 3-37 (246)
426 2jah_A Clavulanic acid dehydro 78.7 2.4 8.2E-05 41.2 5.5 33 413-445 4-37 (247)
427 3m1a_A Putative dehydrogenase; 78.7 1.9 6.6E-05 42.3 4.9 35 413-447 2-37 (281)
428 3lf2_A Short chain oxidoreduct 78.7 2.5 8.5E-05 41.5 5.7 36 412-448 4-40 (265)
429 3k96_A Glycerol-3-phosphate de 78.6 3 0.0001 43.8 6.6 33 415-448 28-60 (356)
430 3ew7_A LMO0794 protein; Q8Y8U8 78.6 2.1 7.3E-05 39.7 5.0 31 417-447 1-32 (221)
431 3ppi_A 3-hydroxyacyl-COA dehyd 78.6 1.9 6.6E-05 42.4 4.9 34 412-445 26-60 (281)
432 3ijr_A Oxidoreductase, short c 78.6 2.4 8E-05 42.5 5.6 35 412-446 43-78 (291)
433 3uve_A Carveol dehydrogenase ( 78.6 2.6 8.8E-05 41.7 5.8 36 411-446 6-42 (286)
434 4dqx_A Probable oxidoreductase 78.5 2.4 8.3E-05 42.2 5.6 35 411-445 22-57 (277)
435 2ptg_A Enoyl-acyl carrier redu 78.5 2.6 9E-05 42.5 5.9 35 412-446 5-42 (319)
436 3hn7_A UDP-N-acetylmuramate-L- 78.4 5.9 0.0002 43.5 9.1 37 412-449 15-52 (524)
437 4egf_A L-xylulose reductase; s 78.3 2.1 7.3E-05 42.1 5.1 33 413-445 17-50 (266)
438 3is3_A 17BETA-hydroxysteroid d 78.3 2.5 8.6E-05 41.6 5.6 36 412-447 14-50 (270)
439 3gvc_A Oxidoreductase, probabl 78.3 2.1 7.3E-05 42.6 5.1 34 412-445 25-59 (277)
440 2bka_A CC3, TAT-interacting pr 78.3 1.7 5.7E-05 41.3 4.2 34 414-447 16-52 (242)
441 1h2b_A Alcohol dehydrogenase; 78.3 4 0.00014 42.1 7.3 33 414-446 185-218 (359)
442 3rui_A Ubiquitin-like modifier 78.3 1.5 5.1E-05 46.3 4.1 37 413-449 31-67 (340)
443 1uzm_A 3-oxoacyl-[acyl-carrier 78.2 2.4 8.1E-05 41.2 5.3 35 412-446 11-46 (247)
444 2q1w_A Putative nucleotide sug 78.2 2.1 7.2E-05 43.1 5.1 35 413-447 18-53 (333)
445 3sxp_A ADP-L-glycero-D-mannohe 78.2 2.5 8.5E-05 43.0 5.7 37 412-448 6-45 (362)
446 4imr_A 3-oxoacyl-(acyl-carrier 78.1 2.2 7.5E-05 42.4 5.1 35 413-448 30-65 (275)
447 2dtx_A Glucose 1-dehydrogenase 78.1 2.1 7.3E-05 42.1 5.0 35 413-447 5-40 (264)
448 2vn8_A Reticulon-4-interacting 78.1 3.7 0.00013 42.6 7.0 33 414-446 182-215 (375)
449 1gu7_A Enoyl-[acyl-carrier-pro 78.1 3.5 0.00012 42.3 6.8 34 415-448 166-201 (364)
450 3zwc_A Peroxisomal bifunctiona 78.1 2 6.8E-05 49.8 5.4 31 417-448 317-347 (742)
451 1ae1_A Tropinone reductase-I; 78.1 2.6 9E-05 41.5 5.7 34 412-445 17-51 (273)
452 4g65_A TRK system potassium up 78.1 6.6 0.00022 42.6 9.3 114 403-551 221-350 (461)
453 1hxh_A 3BETA/17BETA-hydroxyste 78.0 2.1 7.1E-05 41.7 4.9 35 413-448 3-38 (253)
454 1yxm_A Pecra, peroxisomal tran 78.0 2.5 8.7E-05 41.9 5.6 35 412-446 14-49 (303)
455 2p91_A Enoyl-[acyl-carrier-pro 78.0 2.5 8.5E-05 41.9 5.5 34 413-446 18-54 (285)
456 2d8a_A PH0655, probable L-thre 77.9 2.1 7.3E-05 43.8 5.1 32 415-446 167-199 (348)
457 3tqh_A Quinone oxidoreductase; 77.9 4.3 0.00015 41.0 7.3 35 413-447 150-185 (321)
458 3uce_A Dehydrogenase; rossmann 77.9 1.6 5.4E-05 41.6 3.9 34 413-446 3-37 (223)
459 2rhc_B Actinorhodin polyketide 77.9 2.5 8.6E-05 41.8 5.5 34 413-446 19-53 (277)
460 2qq5_A DHRS1, dehydrogenase/re 77.9 2.4 8.1E-05 41.4 5.2 33 413-445 2-35 (260)
461 1qsg_A Enoyl-[acyl-carrier-pro 77.8 2.6 8.8E-05 41.2 5.5 34 413-446 6-42 (265)
462 3gem_A Short chain dehydrogena 77.8 1.6 5.6E-05 43.0 4.1 35 412-446 23-58 (260)
463 3tjr_A Short chain dehydrogena 77.8 2.5 8.5E-05 42.5 5.5 33 413-445 28-61 (301)
464 3t7c_A Carveol dehydrogenase; 77.8 2.7 9.3E-05 42.1 5.7 36 411-446 23-59 (299)
465 3rih_A Short chain dehydrogena 77.8 2.3 7.9E-05 42.9 5.2 36 412-448 37-73 (293)
466 2o2s_A Enoyl-acyl carrier redu 77.8 2.5 8.6E-05 42.6 5.5 35 412-446 5-42 (315)
467 3i4f_A 3-oxoacyl-[acyl-carrier 77.7 2.5 8.4E-05 41.1 5.3 36 413-448 4-40 (264)
468 1e3i_A Alcohol dehydrogenase, 77.7 4.5 0.00015 41.8 7.5 32 414-445 194-226 (376)
469 1yde_A Retinal dehydrogenase/r 77.6 2.9 9.8E-05 41.3 5.8 34 412-445 5-39 (270)
470 3grk_A Enoyl-(acyl-carrier-pro 77.6 2.8 9.7E-05 42.0 5.8 36 412-448 27-65 (293)
471 3hwr_A 2-dehydropantoate 2-red 77.6 6.1 0.00021 40.2 8.4 34 412-445 15-48 (318)
472 2c0c_A Zinc binding alcohol de 77.5 4.3 0.00015 41.9 7.3 34 414-447 162-196 (362)
473 1ooe_A Dihydropteridine reduct 77.5 2.1 7.2E-05 41.0 4.7 34 414-447 1-35 (236)
474 1piw_A Hypothetical zinc-type 77.4 4.4 0.00015 41.7 7.4 33 415-447 179-211 (360)
475 1ks9_A KPA reductase;, 2-dehyd 77.4 2.3 8E-05 41.6 5.1 31 417-448 1-31 (291)
476 3tsc_A Putative oxidoreductase 77.4 2.8 9.5E-05 41.3 5.6 34 412-445 7-41 (277)
477 3icc_A Putative 3-oxoacyl-(acy 77.4 2.7 9.1E-05 40.4 5.4 36 413-448 4-40 (255)
478 4fgs_A Probable dehydrogenase 77.3 2.7 9.4E-05 42.6 5.7 40 408-448 21-61 (273)
479 3gaf_A 7-alpha-hydroxysteroid 77.3 2.2 7.7E-05 41.7 4.9 34 412-445 8-42 (256)
480 3mog_A Probable 3-hydroxybutyr 77.2 3.6 0.00012 45.1 7.0 32 416-448 5-36 (483)
481 4iiu_A 3-oxoacyl-[acyl-carrier 77.2 2.6 8.8E-05 41.3 5.3 37 412-448 22-59 (267)
482 3jyn_A Quinone oxidoreductase; 77.2 3.8 0.00013 41.5 6.7 34 414-447 139-173 (325)
483 2gdz_A NAD+-dependent 15-hydro 77.1 2.6 9E-05 41.1 5.3 33 414-446 5-38 (267)
484 3ctm_A Carbonyl reductase; alc 77.1 2.2 7.4E-05 41.8 4.7 34 413-446 31-65 (279)
485 4b79_A PA4098, probable short- 77.1 2.9 9.9E-05 41.8 5.7 34 414-448 9-43 (242)
486 3vku_A L-LDH, L-lactate dehydr 77.1 5.5 0.00019 41.5 8.0 35 414-448 7-42 (326)
487 1f0y_A HCDH, L-3-hydroxyacyl-C 77.0 2.4 8.2E-05 42.7 5.1 31 417-448 16-46 (302)
488 4fc7_A Peroxisomal 2,4-dienoyl 76.9 2.6 8.9E-05 41.7 5.3 34 413-446 24-58 (277)
489 2b4q_A Rhamnolipids biosynthes 76.9 2.7 9.2E-05 41.7 5.4 35 413-448 26-61 (276)
490 2g5c_A Prephenate dehydrogenas 76.9 2.5 8.5E-05 41.8 5.1 31 417-448 2-34 (281)
491 3sc4_A Short chain dehydrogena 76.9 2.5 8.7E-05 42.0 5.2 36 412-447 5-41 (285)
492 3v2h_A D-beta-hydroxybutyrate 76.9 2.6 9E-05 41.9 5.3 34 412-445 21-55 (281)
493 2p4h_X Vestitone reductase; NA 76.8 2.4 8.1E-05 41.9 4.9 31 416-446 1-32 (322)
494 1iz0_A Quinone oxidoreductase; 76.7 4.6 0.00016 40.3 7.1 34 414-447 124-158 (302)
495 1xkq_A Short-chain reductase f 76.7 2.5 8.7E-05 41.7 5.1 34 413-446 3-37 (280)
496 3fbg_A Putative arginate lyase 76.7 4.9 0.00017 41.1 7.4 33 415-447 150-183 (346)
497 2dq4_A L-threonine 3-dehydroge 76.6 3.2 0.00011 42.4 6.0 32 415-446 164-196 (343)
498 2ew2_A 2-dehydropantoate 2-red 76.6 2.6 8.7E-05 41.8 5.1 115 417-546 4-124 (316)
499 3k6j_A Protein F01G10.3, confi 76.5 3.3 0.00011 45.3 6.4 31 417-448 55-85 (460)
500 2rh8_A Anthocyanidin reductase 76.4 2.8 9.6E-05 41.9 5.4 32 416-447 9-41 (338)
No 1
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=100.00 E-value=7.5e-137 Score=1113.88 Aligned_cols=441 Identities=44% Similarity=0.785 Sum_probs=424.2
Q ss_pred hhhHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHHHHhCccch--HHHHhhcCCCeEEEEEEeEEcCCCCEEEEEEEEEE
Q 006671 190 SKTAGSIVEAALKRDPHEIEFIQSVQESLHALERVIAKNSHYV--NIMERLLEPERMIVFRVPWVDDRGETHVNRGFRVQ 267 (636)
Q Consensus 190 ~~~~~~~~~~~~~~~p~~~ef~q~v~e~~~~~~~~l~~~p~y~--~i~e~L~ePer~i~f~vp~~dd~G~v~v~rGyRVq 267 (636)
..+++++++.+++|||+|+||+|||.|+++||.|+|++||+|. .++|+|++|+|+|+|||||+||+|++++|+|||||
T Consensus 7 ~~~~~~~~~~~~~~~~~~~ef~qa~~e~~~~l~~~~~~~p~y~~~~~~e~l~~PeR~i~~~vp~~~D~G~~~v~~GyRvq 86 (450)
T 4fcc_A 7 TYSLESFLNHVQKRDPNQTEFAQAVREVMTTLWPFLEQNPKYRQMSLLERLVEPERVIQFRVVWVDDRNQVQVNRAWRVQ 86 (450)
T ss_dssp --CHHHHHHHHHTTCTTCHHHHHHHHHHHHHHHHHHHHCGGGTSTTHHHHHTSCSEEEEEEEEEECTTSCEEEEEEEEEE
T ss_pred hhhHHHHHHHHHhhCcCChHHHHHHHHHHHHHHHHHHhChhhhhhhHHHHHhCCceEEEEEEEEEECCCcEEEEEEEEEE
Confidence 3458999999999999999999999999999999999999998 69999999999999999999999999999999999
Q ss_pred ecCCCCCCCCCeEEecCCCHHHHHHHHHHhhhhhccCCCCCCCceEEEeCCCCCCCHHHHHHHHHHHHHHHHhhcCCCCc
Q 006671 268 FSQALGPCRGGLRFHPSMNLSIAKFLGFEQTLKNALSPYKLGGAAGGSDFDPKGKSDNEIMRFCQSFMNEIHRYLGPDKD 347 (636)
Q Consensus 268 hs~alGPakGGlRfhp~v~~~evkaLA~~MT~KnAL~gLP~GGaKGGI~~DP~~~S~~El~r~~r~f~~eL~~~IGp~~D 347 (636)
||+++|||||||||||+||++|+++||++|||||||++||||||||||+|||+++|+.|+|||||+|+++|.+||||++|
T Consensus 87 hn~alGP~kGG~Rfhp~v~l~ev~~La~~mT~KnAl~gLP~GGgKggi~~DPk~~s~~El~R~~~~f~~eL~~~iG~d~d 166 (450)
T 4fcc_A 87 FSSAIGPYKGGMRFHPSVNLSILKFLGFEQTFKNALTTLPMGGGKGGSDFDPKGKSEGEVMRFCQALMTELYRHLGADTD 166 (450)
T ss_dssp EECSSSSEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTSSCCEEEEEESCCCTTCCHHHHHHHHHHHHHHHGGGCBTTTE
T ss_pred ECCCCCCCCCceEecCCCCHHHHHHHHHHHHHHHHHcCCCCCCCceEEecCCCcCCHHHHHHHHHHHHHHhhheecCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCChhHHHHHHHHhhhhhCCCCccccCcccccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCcEEEEecCccH
Q 006671 348 LPSEEMGVGTREMGYLFGQYRRLAGHFQGSFTGPRIFWSGSSLRTEATGYGLVFFAQLILADMNKELKGLRCVVSGSGKI 427 (636)
Q Consensus 348 VpA~DiGt~~rem~~m~~~y~~l~g~~~g~vTGKp~~~GGs~~r~eATG~GV~~~~~~~l~~~g~~l~GkrVaIqGfGNV 427 (636)
|||||+||+++||+||+++|+++.+...+++||||+.+|||.+|++||||||++++++++++.+.+++|+||+|||||||
T Consensus 167 vpa~Dig~~~~em~~~~~~y~~~~~~~~~v~TGk~~~~GGs~~r~~aTg~Gv~~~~~~~~~~~~~~l~Gk~vaVQG~GnV 246 (450)
T 4fcc_A 167 VPAGDIGVGGREVGFMAGMMKKLSNNTACVFTGKGLSFGGSLIRPEATGYGLVYFTEAMLKRHGMGFEGMRVSVSGSGNV 246 (450)
T ss_dssp EEECBTTBCHHHHHHHHHHHHHHHTCCSCCCSSCCGGGTCCTTTTTHHHHHHHHHHHHHHHHTTCCSTTCEEEEECCSHH
T ss_pred CCccceeecchhhhhhhhhhhhccCCCceeecCCCcccCCCCCCCCceeeeHHHHHHHHHHHcCCCcCCCEEEEeCCChH
Confidence 99999999999999999999999999899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhc-CCccccccccCCceeeCCCCccccccceEecCC
Q 006671 428 AMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQ-RSLRDYSKTYARSKYYDEAKPWNERCDVAFPCA 506 (636)
Q Consensus 428 G~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~-g~l~~y~~~~p~a~~i~~~eil~~~cDIliPcA 506 (636)
|+++|++|++.|+|||+|||++|+||||+|||+++|..++++|..+ +++.+|.+.+ ++++++++++|+++||||+|||
T Consensus 247 G~~aa~~L~e~GakvVavsD~~G~i~d~~Gid~e~l~~l~e~k~~~~g~v~~~~~~~-g~~~~~~~~i~~~~~DI~iPcA 325 (450)
T 4fcc_A 247 AQYAIEKAMEFGARVITASDSSGTVVDESGFTKEKLARLIEIKSSRDGRVADYAKEF-GLVYLEGQQPWSVPVDIALPCA 325 (450)
T ss_dssp HHHHHHHHHHTTCEEEEEEETTEEEECTTCCCHHHHHHHHHHHTSTTCCHHHHHHHH-TCEEEETCCGGGSCCSEEEECS
T ss_pred HHHHHHHHHhcCCeEEEEecCCceEEeCCCCCHHHHHHHHHHhcccCCccccccccC-CcEEecCcccccCCccEEeecc
Confidence 9999999999999999999999999999999999998888887644 6788876554 7889999999999999999999
Q ss_pred CcCccchhhHHHhhhcCceEEEeCCCCCCCHHHHHHHHHCCceEecccccccccceeecchhccccCCCCCCHHHHHHHH
Q 006671 507 SQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANVLIAPAMAAGAGGVVAGELELNQECNMVHWSPEDFESKL 586 (636)
Q Consensus 507 ~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~~iL~~rGIlviPD~~aNAGGVivS~~E~~qN~~~~~ws~eeV~~rL 586 (636)
++|+||.+||++|..++||+|+||||+|+||||+++|++|||+|+||+++||||||+|||||+||+++++|++|+|++||
T Consensus 326 l~~~I~~~~a~~L~a~g~k~IaEgAN~p~t~eA~~iL~~rGIl~~PD~~aNAGGVi~S~~E~~qn~~~~~w~~eeV~~kL 405 (450)
T 4fcc_A 326 TQNELDVDAAHQLIANGVKAVAEGANMPTTIEATELFQQAGVLFAPGKAANAGGVATSGLEMAQNAARLGWKAEKVDARL 405 (450)
T ss_dssp CTTCBCHHHHHHHHHTTCCEEECCSSSCBCHHHHHHHHHTTCEEECHHHHTTHHHHHHHHHHHHHHHTCCCCHHHHHHHH
T ss_pred ccccccHHHHHHHHhcCceEEecCCCCCCCHHHHHHHHHCCCEEEChHHhcCccHhhhHHHHhhhcccCCCCHHHHHHHH
Confidence 99999999999998889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCC
Q 006671 587 QEAMKQTYQRALKAATDFGYQKESPEALVHGAVISSFLTIAQAMTDQGCV 636 (636)
Q Consensus 587 ~~~m~~~~~~v~~~A~~~~~~~~~~~~~~~aA~i~a~~rVa~Am~~~G~~ 636 (636)
+++|.++|+++++++++.. ..+|+.|||++||+|||+||++||+|
T Consensus 406 ~~im~~~~~~~~~~~~e~~-----~~~~~~aA~i~a~~rVa~Am~~~G~v 450 (450)
T 4fcc_A 406 HHIMLDIHHACVEHGGEGE-----QTNYVQGANIAGFVKVADAMLAQGVI 450 (450)
T ss_dssp HHHHHHHHHHHHHTSCSSS-----SCCHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHhcCCC
Confidence 9999999999998876532 23899999999999999999999997
No 2
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=100.00 E-value=5.7e-136 Score=1106.74 Aligned_cols=444 Identities=45% Similarity=0.899 Sum_probs=432.2
Q ss_pred hhhhHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHHHHhCccchHHHHhhcCCCeEEEEEEeEEcCCCCEEEEEEEEEEe
Q 006671 189 MSKTAGSIVEAALKRDPHEIEFIQSVQESLHALERVIAKNSHYVNIMERLLEPERMIVFRVPWVDDRGETHVNRGFRVQF 268 (636)
Q Consensus 189 ~~~~~~~~~~~~~~~~p~~~ef~q~v~e~~~~~~~~l~~~p~y~~i~e~L~ePer~i~f~vp~~dd~G~v~v~rGyRVqh 268 (636)
..++++++++.+++|+|+|+||+|+|+|++++++|+|+.+|+|.+++++|++|+|+|+|+|||.||+|++++|+||||||
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~ef~qa~~e~~~~~~~~~~~~p~~~~~~~~l~~P~r~i~~~vp~~~D~G~~~v~~GyRvqh 91 (456)
T 3r3j_A 12 VDNQIEELREKVVSKNKNEPEFLQAFEEVLSCLKPVFKKDNVYIGVLENIAEPERVIQFRVPWINDKGEHKMNRGFRVQY 91 (456)
T ss_dssp HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTHHHHHHCTHHHHHHHHHTSCSEEEEEEEEEECTTSCEEEEEEEEEEE
T ss_pred hHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHhhChHhhHHHHhccCCceEEEEEEEEEeCCCcEEEEEEEEEEE
Confidence 35568999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCeEEecCCCHHHHHHHHHHhhhhhccCCCCCCCceEEEeCCCCCCCHHHHHHHHHHHHHHHHhhcCCCCcc
Q 006671 269 SQALGPCRGGLRFHPSMNLSIAKFLGFEQTLKNALSPYKLGGAAGGSDFDPKGKSDNEIMRFCQSFMNEIHRYLGPDKDL 348 (636)
Q Consensus 269 s~alGPakGGlRfhp~v~~~evkaLA~~MT~KnAL~gLP~GGaKGGI~~DP~~~S~~El~r~~r~f~~eL~~~IGp~~DV 348 (636)
|+++|||||||||||+||++|+++||++|||||||++||||||||||++||+++|+.|++||||+|+++|.+||||++||
T Consensus 92 n~a~GPakGGiR~~p~v~~~ev~~La~~mt~KnAl~~lP~GGgKGgi~~DPk~~s~~el~r~~r~f~~eL~~~iGp~~Dv 171 (456)
T 3r3j_A 92 NSVLGPYKGGLRFHPAVNLSVIKFLGFEQIFKNSLTTLPMGGGKGGSDFDPKGKSENEILKFCQSFMTNLFRYIGPNTDV 171 (456)
T ss_dssp ECSSSSEEEEEEECTTCCHHHHHHHHHHHHHHHHHTSSCCCEEEEEESCCCTTCCHHHHHHHHHHHHHHHGGGCBTTTEE
T ss_pred CCcCCCccCceEecCCCCHHHHHHHHHHHHHHHHhcCCCCCcceeEEecCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCChhHHHHHHHHhhhhhCCCCccccCcccccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCcEEEEecCccHH
Q 006671 349 PSEEMGVGTREMGYLFGQYRRLAGHFQGSFTGPRIFWSGSSLRTEATGYGLVFFAQLILADMNKELKGLRCVVSGSGKIA 428 (636)
Q Consensus 349 pA~DiGt~~rem~~m~~~y~~l~g~~~g~vTGKp~~~GGs~~r~eATG~GV~~~~~~~l~~~g~~l~GkrVaIqGfGNVG 428 (636)
|||||||+++||+||+++|+++++...|++||||+.+|||.+|++||||||+++++++++++|.+++|+||+||||||||
T Consensus 172 pApDvGt~~~em~w~~~~y~~~~~~~~g~vTGKp~~~GGs~~r~~aTg~Gv~~~~~~~~~~~g~~l~g~~VaVQG~GnVG 251 (456)
T 3r3j_A 172 PAGDIGVGGREIGYLFGQYKKLKNSFEGVLTGKNIKWGGSNIRAEATGYGVVYFAENVLKDLNDNLENKKCLVSGSGNVA 251 (456)
T ss_dssp EECBTTBCHHHHHHHHHHHHHHHTSCCCSCBSCCGGGTCCTTTTTHHHHHHHHHHHHHHHTTTCCSTTCCEEEECCSHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHhhcCcccceecCCcccccCCCCCCcccchHHHHHHHHHHHHcCCCccCCEEEEECCCHHH
Confidence 99999999999999999999999888999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhc-CCccccccccCCceeeCCCCccccccceEecCCC
Q 006671 429 MHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQ-RSLRDYSKTYARSKYYDEAKPWNERCDVAFPCAS 507 (636)
Q Consensus 429 ~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~-g~l~~y~~~~p~a~~i~~~eil~~~cDIliPcA~ 507 (636)
+++|++|++.|+|||+|||++|+||||+|||+++|..++++|+.+ +++.+|...+|++++++++++|+++||||+|||+
T Consensus 252 ~~aa~~L~e~GakvVavsD~~G~iyd~~Gld~~~l~~~~~~k~~~~~~v~~~~~~~~~a~~v~~~~i~~~~~DI~iPcA~ 331 (456)
T 3r3j_A 252 QYLVEKLIEKGAIVLTMSDSNGYILEPNGFTKEQLNYIMDIKNNQRLRLKEYLKYSKTAKYFENQKPWNIPCDIAFPCAT 331 (456)
T ss_dssp HHHHHHHHHHTCCBCCEECSSCEEECTTCCCHHHHHHHHHHHHTSCCCGGGGGGTCSSCEEECSCCGGGSCCSEEEECSC
T ss_pred HHHHHHHHHCCCEEEEEECCCCcEECCCCCCHHHHHHHHHHHHhcCcchhhhhhcCCCceEeCCccccccCccEEEeCCC
Confidence 999999999999999999999999999999999998887888765 5788888788999999999999999999999999
Q ss_pred cCccchhhHHHhhhcCceEEEeCCCCCCCHHHHHHHHHCCceEecccccccccceeecchhccccCCCCCCHHHHHHHHH
Q 006671 508 QNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANVLIAPAMAAGAGGVVAGELELNQECNMVHWSPEDFESKLQ 587 (636)
Q Consensus 508 ~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~~iL~~rGIlviPD~~aNAGGVivS~~E~~qN~~~~~ws~eeV~~rL~ 587 (636)
+|+||.+||++|++++||+||||||+|+||+|+++|++|||+|+||+++|||||++|||||+||+++++|++|+|++||+
T Consensus 332 ~~~I~~~na~~l~~~~ak~V~EgAN~p~T~eA~~iL~~rGI~~~PD~~aNAGGV~vS~~E~~qn~~~~~w~~eeV~~~L~ 411 (456)
T 3r3j_A 332 QNEINENDADLFIQNKCKMIVEGANMPTHIKALHKLKQNNIILCPSKAANAGGVAVSGLEMSQNSMRLQWTHQETDMKLQ 411 (456)
T ss_dssp TTCBCHHHHHHHHHHTCCEEECCSSSCBCTTHHHHHHTTTCEEECHHHHTTHHHHHHHHHHHHHHHTCCCCHHHHHHHHH
T ss_pred ccchhhHHHHHHHhcCCeEEEecCCCCCCHHHHHHHHHCCCEEeChHHhcCCceeeehHHHhhcccccCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCC
Q 006671 588 EAMKQTYQRALKAATDFGYQKESPEALVHGAVISSFLTIAQAMTDQGCV 636 (636)
Q Consensus 588 ~~m~~~~~~v~~~A~~~~~~~~~~~~~~~aA~i~a~~rVa~Am~~~G~~ 636 (636)
++|.++|++++++|+++++ +.+||.||||+||+|||+||++||+|
T Consensus 412 ~im~~~~~~~~~~a~~~~~----~~~~r~aA~i~~~~rva~a~~~~G~~ 456 (456)
T 3r3j_A 412 NIMKSIYEQCHNTSKIYLN----ESDLVAGANIAGFLKVADSFLEQGGL 456 (456)
T ss_dssp HHHHHHHHHHHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHhCC----CCCHHHhccHHHHHHHHHHHHhcCCC
Confidence 9999999999999999987 33899999999999999999999986
No 3
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=100.00 E-value=1.1e-133 Score=1093.08 Aligned_cols=445 Identities=43% Similarity=0.837 Sum_probs=433.1
Q ss_pred hhhhHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHHHHhCccchHHHHhhcCCCeEEEEEEeEEcCCCCEEEEEEEEEEe
Q 006671 189 MSKTAGSIVEAALKRDPHEIEFIQSVQESLHALERVIAKNSHYVNIMERLLEPERMIVFRVPWVDDRGETHVNRGFRVQF 268 (636)
Q Consensus 189 ~~~~~~~~~~~~~~~~p~~~ef~q~v~e~~~~~~~~l~~~p~y~~i~e~L~ePer~i~f~vp~~dd~G~v~v~rGyRVqh 268 (636)
|+++++.+++.+.+|+|+|+||+|++++++++++|+|+.+|+|..++++|++|+|+|+|+|||.||+|++++|+||||||
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~p~~~~~le~l~~Per~i~~~vp~~~D~G~v~v~~Gyrvqh 104 (470)
T 2bma_A 25 VDQEMNNVYERVMKLDPNQVEFLQAFHEILYSLKPLFMEEPKYLPIIETLSEPERAIQFRVCWLDDNGVQRKNRCFRVQY 104 (470)
T ss_dssp HHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTHHHHHHCTTHHHHHHHHTSCSEEEEEEEEEECTTSCEEEEEEEEEEE
T ss_pred hHHHHHHHHHHHHhhCCCCchHHHHHHHHHHHHHHHhccChhhhHHHHHhcCCceEEEEEEEEEeCCCCEEEEEEEEEEE
Confidence 55568999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCeEEecCCCHHHHHHHHHHhhhhhccCCCCCCCceEEEeCCCCCCCHHHHHHHHHHHHHHHHhhcCCCCcc
Q 006671 269 SQALGPCRGGLRFHPSMNLSIAKFLGFEQTLKNALSPYKLGGAAGGSDFDPKGKSDNEIMRFCQSFMNEIHRYLGPDKDL 348 (636)
Q Consensus 269 s~alGPakGGlRfhp~v~~~evkaLA~~MT~KnAL~gLP~GGaKGGI~~DP~~~S~~El~r~~r~f~~eL~~~IGp~~DV 348 (636)
|+++|||||||||||+||++|+++||++|||||||++||||||||||+|||+++|+.|+|||||+||++|.+||||++||
T Consensus 105 n~a~GPakGGiR~hp~v~~~ev~~La~~mt~KnAl~~lP~GGgKGgi~~DPk~~S~~El~r~~r~f~~~L~~~iGp~~Dv 184 (470)
T 2bma_A 105 NSALGPYKGGLRFHPSVNLSIVKFLGFEQIFKNSLTGLSMGGGKGGSDFDPKGKSDNEILKFCQAFMNELYRHIGPCTDV 184 (470)
T ss_dssp ECSSSSEEEEEEECTTCCHHHHHHHHHHHHHHHHHTCSSCEEEEEEESCCCTTCCHHHHHHHHHHHHHHHGGGCBTTTEE
T ss_pred CCCCCCCCCCeEeeCCCCHHHHHHHHHHHHHHHHhcCCCCCCcceEEeCCCCcCCHHHHHHHHHHHHHHhhhccCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCChhHHHHHHHHhhhhhCCCCccccCcccccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCcEEEEecCccHH
Q 006671 349 PSEEMGVGTREMGYLFGQYRRLAGHFQGSFTGPRIFWSGSSLRTEATGYGLVFFAQLILADMNKELKGLRCVVSGSGKIA 428 (636)
Q Consensus 349 pA~DiGt~~rem~~m~~~y~~l~g~~~g~vTGKp~~~GGs~~r~eATG~GV~~~~~~~l~~~g~~l~GkrVaIqGfGNVG 428 (636)
||||+||+++||+||+++|+++++.+.|++||||+.+|||.+|++||||||+++++++++++|.+|+|+||+||||||||
T Consensus 185 pApDvGt~~~em~~~~~~y~~~~~~~~gvvTGKp~~~GGs~~r~~aTg~Gv~~~~~~~l~~~G~~l~g~~vaVqG~GnVG 264 (470)
T 2bma_A 185 PAGDIGVGGREIGYLYGQYKKIVNSFNGTLTGKNVKWGGSNLRVEATGYGLVYFVLEVLKSLNIPVEKQTAVVSGSGNVA 264 (470)
T ss_dssp EECCSSCCHHHHHHHHHHHHHHHCCCSCSSSSCCGGGTCCTTTTTHHHHHHHHHHHHHHHTTTCCGGGCEEEEECSSHHH
T ss_pred cCCCCCCChHHHHHHHHHHHHhcCCcccEEeCCCccCCCCCCccccchHHHHHHHHHHHHhccCCcCCCEEEEECCcHHH
Confidence 99999999999999999999999998899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhc-CCccccccccCCceeeCCCCccccccceEecCCC
Q 006671 429 MHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQ-RSLRDYSKTYARSKYYDEAKPWNERCDVAFPCAS 507 (636)
Q Consensus 429 ~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~-g~l~~y~~~~p~a~~i~~~eil~~~cDIliPcA~ 507 (636)
+++|++|++.|+|||+|||++|+||||+|||.+++..|+++|+.+ +++.+|.+.+|++++++++++|+++||||+|||+
T Consensus 265 ~~~a~~L~~~GakvVavsD~~G~i~dp~Gid~edl~~l~~~k~~~~g~v~~~~~~~~~a~~v~~~~~~~~~~DI~iPcA~ 344 (470)
T 2bma_A 265 LYCVQKLLHLNVKVLTLSDSNGYVYEPNGFTHENLEFLIDLKEEKKGRIKEYLNHSSTAKYFPNEKPWGVPCTLAFPCAT 344 (470)
T ss_dssp HHHHHHHHHTTCEECEEEETTEEEECSSCCCHHHHHHHHHHHTTTTCCGGGGGGTCSSCEECSSCCTTSSCCSEEEECSS
T ss_pred HHHHHHHHHCCCEEEEEEeCCceEECCCCCCHHHHHHHHHHHHhcCCcHHHHHhhcCCcEEecCcCeeecCccEEEeccc
Confidence 999999999999999999999999999999999988899998875 7899998778889999989999999999999999
Q ss_pred cCccchhhHHHhhhcCceEEEeCCCCCCCHHHHHHHHHCCceEecccccccccceeecchhccccCCCCCCHHHHHHHHH
Q 006671 508 QNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANVLIAPAMAAGAGGVVAGELELNQECNMVHWSPEDFESKLQ 587 (636)
Q Consensus 508 ~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~~iL~~rGIlviPD~~aNAGGVivS~~E~~qN~~~~~ws~eeV~~rL~ 587 (636)
+|+||.+||++|++++||+|+||||+|+||+|+++|++|||+|+||+++|||||++|||||+||+++++|++|+|++||+
T Consensus 345 ~~~I~~~na~~l~~~~ak~V~EgAN~p~T~eA~~~L~~rGIl~~PD~~aNAGGV~~S~~E~~qn~~~~~w~~eev~~~L~ 424 (470)
T 2bma_A 345 QNDVDLDQAKLLQKNGCILVGEGANMPSTVDAINLFKSNNIIYCPSKAANAGGVAISGLEMSQNFQFSHWTRETVDEKLK 424 (470)
T ss_dssp TTCBCSHHHHHHHHTTCCEEECCSSSCBCHHHHHHHHHTTCEEECHHHHTTHHHHHHHHHHHHHHTTCCCCHHHHHHHHH
T ss_pred cCcCCHHHHHHHHhcCcEEEEeCCCCCCCHHHHHHHHHCCcEEEChHHhhCCCceeeHHHhhccccccCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCC
Q 006671 588 EAMKQTYQRALKAATDFGYQKESPEALVHGAVISSFLTIAQAMTDQGCV 636 (636)
Q Consensus 588 ~~m~~~~~~v~~~A~~~~~~~~~~~~~~~aA~i~a~~rVa~Am~~~G~~ 636 (636)
++|.++|++++++|++++++ ++ +||.||||+||.|||+||.+||++
T Consensus 425 ~im~~~~~~~~~~a~~~~~~--~~-~~r~~A~i~~~~rva~am~~~G~~ 470 (470)
T 2bma_A 425 EIMRNIFIACSENALKYTKN--KY-DLQAGANIAGFLKVAESYIEQGCF 470 (470)
T ss_dssp HHHHHHHHHHHHHHHHHHSC--SS-CHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHHHHHHhCCC--CC-CHHHHHHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999872 12 899999999999999999999986
No 4
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=100.00 E-value=3.4e-127 Score=1040.28 Aligned_cols=441 Identities=41% Similarity=0.791 Sum_probs=425.4
Q ss_pred hhHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHHHHhCccchH--HHHhhcCCCeEEEEEEeEEcCCCCEEEEEEEEEEe
Q 006671 191 KTAGSIVEAALKRDPHEIEFIQSVQESLHALERVIAKNSHYVN--IMERLLEPERMIVFRVPWVDDRGETHVNRGFRVQF 268 (636)
Q Consensus 191 ~~~~~~~~~~~~~~p~~~ef~q~v~e~~~~~~~~l~~~p~y~~--i~e~L~ePer~i~f~vp~~dd~G~v~v~rGyRVqh 268 (636)
.+++.+++.+.+|+|+|+||+|++++++++++|+|+.+|+|.. ++++|++|+|+|+|+|||+||+|++++|+||||||
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Per~i~~~vp~~~d~G~~~v~~G~rv~h 81 (449)
T 1bgv_A 2 KYVDRVIAEVEKKYADEPEFVQTVEEVLSSLGPVVDAHPEYEEVALLERMVIPERVIEFRVPWEDDNGKVHVNTGYRVQF 81 (449)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHTTHHHHHTCHHHHHTTHHHHHTSCSEEEEEEEEEECTTSCEEEEEEEEEEE
T ss_pred hHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHHhccChhhhhhhHHHHhcCCceEEEEEEEEEeCCCCEEEEeEEEEEE
Confidence 3568899999999999999999999999999999999999996 99999999999999999999999999999999999
Q ss_pred cCCCCCCCCCeEEecCCCHHHHHHHHHHhhhhhccCCCCCCCceEEEeCCCCCCCHHHHHHHHHHHHHHHHhhcCCCCcc
Q 006671 269 SQALGPCRGGLRFHPSMNLSIAKFLGFEQTLKNALSPYKLGGAAGGSDFDPKGKSDNEIMRFCQSFMNEIHRYLGPDKDL 348 (636)
Q Consensus 269 s~alGPakGGlRfhp~v~~~evkaLA~~MT~KnAL~gLP~GGaKGGI~~DP~~~S~~El~r~~r~f~~eL~~~IGp~~DV 348 (636)
|+++|||||||||||++|++|+++||++|||||||++||+|||||||++||+++|+.|++||||+||++|.+||||++||
T Consensus 82 n~~~GPakGGlR~~p~v~~~ev~~La~~mt~KnAl~~lP~GGgKGGi~~dP~~~s~~e~~r~~r~f~~~L~~~ig~~~dv 161 (449)
T 1bgv_A 82 NGAIGPYKGGLRFAPSVNLSIMKFLGFEQAFKDSLTTLPMGGAKGGSDFDPNGKSDREVMRFCQAFMTELYRHIGPDIDV 161 (449)
T ss_dssp ECSSSSEEEEEEECTTCCHHHHHHHHHHHHHHHHHTSSSCCEEEEEESCCCTTCCHHHHHHHHHHHHHHHGGGCBTTTEE
T ss_pred cCCcCCCCCCeeecCCCCHHHHHHHHHHHHHHHHhhCCCCCCccEEEECCCccCCHHHHHHHHHHHHHHhhheeCCCCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCChhHHHHHHHHhhhhhCCCC-ccccCcccccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCcEEEEecCccH
Q 006671 349 PSEEMGVGTREMGYLFGQYRRLAGHFQ-GSFTGPRIFWSGSSLRTEATGYGLVFFAQLILADMNKELKGLRCVVSGSGKI 427 (636)
Q Consensus 349 pA~DiGt~~rem~~m~~~y~~l~g~~~-g~vTGKp~~~GGs~~r~eATG~GV~~~~~~~l~~~g~~l~GkrVaIqGfGNV 427 (636)
||||+||+++||+||+++|+++++.+. |++||||+.+|||.+|+++|||||+++++++++++|.+++|+||+|||||||
T Consensus 162 pA~DvGt~~~~m~~~~~~y~~~~~~~~~g~~tGk~~~~GGs~~r~~aTg~Gv~~~~~~~~~~~G~~l~g~~v~VqG~GnV 241 (449)
T 1bgv_A 162 PAGDLGVGAREIGYMYGQYRKIVGGFYNGVLTGKARSFGGSLVRPEATGYGSVYYVEAVMKHENDTLVGKTVALAGFGNV 241 (449)
T ss_dssp EECBTTBCHHHHHHHHHHHHHHHTSCCGGGSSSCCGGGTCCTTTTTHHHHHHHHHHHHHHHHTTCCSTTCEEEECCSSHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHhcCCCcCceEecCCcccCCCCCcccchhHHHHHHHHHHHHHccCCcCCCEEEEECCCHH
Confidence 999999999999999999999998764 9999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHCCCEEEEEeCCCCceeCCCCC-CHHHHHHHHHHHhhc-CCccccccccCCceeeCCCCccccccceEecC
Q 006671 428 AMHVLEKLIAYGAIPVSVSDAKGYLVDEDGF-DYMKISFLRDIKSQQ-RSLRDYSKTYARSKYYDEAKPWNERCDVAFPC 505 (636)
Q Consensus 428 G~~aAe~L~e~GAkVVaVSDs~G~IydpdGL-Dve~L~~L~~~k~~~-g~l~~y~~~~p~a~~i~~~eil~~~cDIliPc 505 (636)
|+++|++|++.|+|||+|||++|+||||+|| |.+++..|+++|+.+ +++.+|...+ ++++++++++|+++||||+||
T Consensus 242 G~~~a~~L~~~GakvVavsD~~G~i~dp~Gi~d~edi~~l~~~k~~~~g~v~~y~~~~-~a~~i~~~e~~~~~~Dil~P~ 320 (449)
T 1bgv_A 242 AWGAAKKLAELGAKAVTLSGPDGYIYDPEGITTEEKINYMLEMRASGRNKVQDYADKF-GVQFFPGEKPWGQKVDIIMPC 320 (449)
T ss_dssp HHHHHHHHHHHTCEEEEEEETTEEEECTTCSCSHHHHHHHHHHHHHCCCCTHHHHHHH-TCEEEETCCGGGSCCSEEECC
T ss_pred HHHHHHHHHHCCCEEEEEEeCCceEECCCcCCCHHHHHHHHHHHhccCCChhhccccc-CCEEeCchhhhcCCcceeecc
Confidence 9999999999999999999999999999999 887777788888876 7899886544 578899889999999999999
Q ss_pred CCcCccchhhHHHhhhcCceEEEeCCCCCCCHHHHHHHHHC-CceEecccccccccceeecchhccccCCCCCCHHHHHH
Q 006671 506 ASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKA-NVLIAPAMAAGAGGVVAGELELNQECNMVHWSPEDFES 584 (636)
Q Consensus 506 A~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~~iL~~r-GIlviPD~~aNAGGVivS~~E~~qN~~~~~ws~eeV~~ 584 (636)
|++|+||.+||++|..++||+|+||||+|+||+|+++|++| ||+|+||+++|||||++|||||+||+++++|++|+|++
T Consensus 321 A~~~~I~~~na~~l~a~g~kiV~EgAN~p~T~eA~~~l~~~~Gi~~~PD~~aNaGGV~~S~~E~~qn~~~~~w~~eev~~ 400 (449)
T 1bgv_A 321 ATQNDVDLEQAKKIVANNVKYYIEVANMPTTNEALRFLMQQPNMVVAPSKAVNAGGVLVSGFEMSQNSERLSWTAEEVDS 400 (449)
T ss_dssp SCTTCBCHHHHHHHHHTTCCEEECCSSSCBCHHHHHHHHHCTTCEEECHHHHTTHHHHHHHHHHHHHHHTSCCCHHHHHH
T ss_pred ccccccchhhHHHHHhcCCeEEEeCCCCcCCHHHHHHHHHcCCEEEEChHHhcCCCceeehhhhhcccccccccHHHHHH
Confidence 99999999999999888999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCC
Q 006671 585 KLQEAMKQTYQRALKAATDFGYQKESPEALVHGAVISSFLTIAQAMTDQGCV 636 (636)
Q Consensus 585 rL~~~m~~~~~~v~~~A~~~~~~~~~~~~~~~aA~i~a~~rVa~Am~~~G~~ 636 (636)
+|+++|.++|+.|++.|++++++ .+++.|||++||.||++||.+||++
T Consensus 401 ~L~~~m~~~~~~v~~~a~~~~~~----~~~~~~A~i~~~~rv~~a~~~~G~~ 448 (449)
T 1bgv_A 401 KLHQVMTDIHDGSAAAAERYGLG----YNLVAGANIVGFQKIADAMMAQGIA 448 (449)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCC----SCHHHHHHHHHHHHHHHHHHHHCSC
T ss_pred HHHHHHHHHHHHHHHHHHHhCCC----CCHHHHhhHHHHHHHHHHHHhcCcc
Confidence 99999999999999999999873 3899999999999999999999985
No 5
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=100.00 E-value=6e-125 Score=1015.93 Aligned_cols=409 Identities=27% Similarity=0.446 Sum_probs=398.0
Q ss_pred ccHHHHHHHHHHHHHHHHHhCccchHHHHhhcCCCeEEEEEEeEEcCCCCEEEEEEEEEEecCCCCCCCCCeEEecCCCH
Q 006671 208 IEFIQSVQESLHALERVIAKNSHYVNIMERLLEPERMIVFRVPWVDDRGETHVNRGFRVQFSQALGPCRGGLRFHPSMNL 287 (636)
Q Consensus 208 ~ef~q~v~e~~~~~~~~l~~~p~y~~i~e~L~ePer~i~f~vp~~dd~G~v~v~rGyRVqhs~alGPakGGlRfhp~v~~ 287 (636)
..++++++++++.+++.|+.+|. ++++|++|+|+|+|+|||.||+|++++|+|||||||+++|||||||||||+||+
T Consensus 15 ~~~~~~~~~~~~~a~~~~~~~~~---~~~~l~~p~r~~~~~vp~~~d~G~~~v~~GyRvqhn~a~GP~kGGiR~~p~v~~ 91 (424)
T 3k92_A 15 LNLFLSTQTIIKEALRKLGYPGD---MYELMKEPQRMLTVRIPVKMDNGSVKVFTGYRSQHNDAVGPTKGGVRFHPEVNE 91 (424)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCHH---HHHHHSSCSEEEEEEEEEECTTSCEEEEEEEEEECCCSSSSEECCEEEETTCCH
T ss_pred CCHHHHHHHHHHHHHHHcCCCHH---HHHHhcCCCeEEEEEEEEEecCCcEEEEEEEEEEECCcCCCCCCCeEecCCCCH
Confidence 35899999999999999999996 999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhhccCCCCCCCceEEEeCCCCCCCHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCChhHHHHHHHHh
Q 006671 288 SIAKFLGFEQTLKNALSPYKLGGAAGGSDFDPKGKSDNEIMRFCQSFMNEIHRYLGPDKDLPSEEMGVGTREMGYLFGQY 367 (636)
Q Consensus 288 ~evkaLA~~MT~KnAL~gLP~GGaKGGI~~DP~~~S~~El~r~~r~f~~eL~~~IGp~~DVpA~DiGt~~rem~~m~~~y 367 (636)
+|+++||++|||||||++||||||||||++||+++|+.|+|||||+|+++|.++|||++|||||||||+++||+||+++|
T Consensus 92 ~ev~~La~~mt~KnAl~~lP~GGgKggi~~DP~~~s~~El~r~~r~f~~~l~~~iG~~~dipApDvgt~~~~m~~~~~~y 171 (424)
T 3k92_A 92 EKVKALSIWMTLKCGIANLPYGGGKGGIICDPRTMSFGELERLSRGYVRAISQIVGPTKDIPAPDVYTNSQIMAWMMDEY 171 (424)
T ss_dssp HHHHHHHHHHHHHHHHTTCSCEEEEEEEECCGGGSCHHHHHHHHHHHHHHHGGGCBTTTEECCBCTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCcceEEecCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCccCCcCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhCCCC-ccccCcccccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCcEEEEecCccHHHHHHHHHHHCCCEEEEEe
Q 006671 368 RRLAGHFQ-GSFTGPRIFWSGSSLRTEATGYGLVFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVS 446 (636)
Q Consensus 368 ~~l~g~~~-g~vTGKp~~~GGs~~r~eATG~GV~~~~~~~l~~~g~~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVS 446 (636)
++++|.+. +++||||+.+|||.+|+++|||||+++++++++++|.+++|+||+||||||||+++|++|+++|+|||+||
T Consensus 172 ~~~~g~~~~~~vTGkp~~~GGs~~r~~aTg~Gv~~~~~~~~~~~g~~l~g~~vaVqG~GnVG~~aa~~l~e~GakVVavs 251 (424)
T 3k92_A 172 SRLREFDSPGFITGKPLVLGGSQGRETATAQGVTICIEEAVKKKGIKLQNARIIIQGFGNAGSFLAKFMHDAGAKVIGIS 251 (424)
T ss_dssp HHHHTSCCGGGCSSCCGGGTCCTTTTTHHHHHHHHHHHHHHHHTTCCGGGCEEEEECCSHHHHHHHHHHHHHTCEEEEEE
T ss_pred HHHhCCCCcceeecccccCCCcCCCcccHHHHHHHHHHHHHHHcCCCcccCEEEEECCCHHHHHHHHHHHHCCCEEEEEE
Confidence 99999874 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeCCCCccccccceEecCCCcCccchhhHHHhhhcCceE
Q 006671 447 DAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKPWNERCDVAFPCASQNEIDQSDAINLVNSGCRI 526 (636)
Q Consensus 447 Ds~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~~~eil~~~cDIliPcA~~n~It~enA~~l~~~~aki 526 (636)
|++|+||||+|||+++| ++++++++++.+| | +++++++++|+++||||+|||++|+||.+||++| +||+
T Consensus 252 D~~G~iyd~~GlD~~~l---~~~~~~~g~i~~~----~-a~~~~~~~i~~~~~DIliPcA~~n~I~~~~a~~l---~ak~ 320 (424)
T 3k92_A 252 DANGGLYNPDGLDIPYL---LDKRDSFGMVTNL----F-TDVITNEELLEKDCDILVPAAISNQITAKNAHNI---QASI 320 (424)
T ss_dssp CSSCEEECTTCCCHHHH---HHHCCSSSCCGGG----C-SCCBCHHHHHHSCCSEEEECSCSSCBCTTTGGGC---CCSE
T ss_pred CCCCcEECCCCCCHHHH---HHHHHHhCCCCCC----C-cEEecCccceeccccEEeecCcccccChhhHhhc---CceE
Confidence 99999999999999885 5677788888887 4 7788888999999999999999999999999999 9999
Q ss_pred EEeCCCCCCCHHHHHHHHHCCceEecccccccccceeecchhccccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Q 006671 527 LVEGSNMPCTPEAVDVLKKANVLIAPAMAAGAGGVVAGELELNQECNMVHWSPEDFESKLQEAMKQTYQRALKAATDFGY 606 (636)
Q Consensus 527 VvEgAN~P~T~eA~~iL~~rGIlviPD~~aNAGGVivS~~E~~qN~~~~~ws~eeV~~rL~~~m~~~~~~v~~~A~~~~~ 606 (636)
|+||||+|+||+|+++|++|||+|+||+++|||||++|||||+||+++++|++|+|+++|+++|.++|.+|+++|+++++
T Consensus 321 V~EgAN~p~t~eA~~iL~~rGI~~~PD~~aNAGGV~vS~~E~~qn~~~~~w~~eeV~~~l~~~m~~~~~~v~~~a~~~~~ 400 (424)
T 3k92_A 321 VVERANGPTTIDATKILNERGVLLVPDILASAGGVTVSYFEWVQNNQGYYWSEEEVAEKLRSVMVSSFETIYQTAATHKV 400 (424)
T ss_dssp EECCSSSCBCHHHHHHHHHTTCEEECHHHHTTHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred EEcCCCCCCCHHHHHHHHHCCCEEECchHhcCCCEEeehhHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCccHHHHHHHHHHHHHHHHHHhcCCC
Q 006671 607 QKESPEALVHGAVISSFLTIAQAMTDQGCV 636 (636)
Q Consensus 607 ~~~~~~~~~~aA~i~a~~rVa~Am~~~G~~ 636 (636)
+++.|||++||+||++||++||++
T Consensus 401 ------~~~~aA~~~a~~rva~a~~~~G~~ 424 (424)
T 3k92_A 401 ------DMRLAAYMTGIRKSAEASRFRGWV 424 (424)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred ------CHHHHHHHHHHHHHHHHHHHcCCC
Confidence 899999999999999999999985
No 6
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=100.00 E-value=2e-123 Score=1008.66 Aligned_cols=413 Identities=27% Similarity=0.457 Sum_probs=400.7
Q ss_pred CCCccHHHHHHHHHHHHHHHHHhCccchHHHHhhcCCCeEEEEEEeEEcCCCCEEEEEEEEEEecCCCCCCCCCeEEecC
Q 006671 205 PHEIEFIQSVQESLHALERVIAKNSHYVNIMERLLEPERMIVFRVPWVDDRGETHVNRGFRVQFSQALGPCRGGLRFHPS 284 (636)
Q Consensus 205 p~~~ef~q~v~e~~~~~~~~l~~~p~y~~i~e~L~ePer~i~f~vp~~dd~G~v~v~rGyRVqhs~alGPakGGlRfhp~ 284 (636)
+.++.|+|++++++++++|+|+.+|+ ++++|++|+|+|+|+|||+||+|++++|+|||||||+++|||||||||||+
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~P~r~i~~~~p~~~D~G~~~~~~G~rvqhn~a~GPakGGiR~~p~ 102 (440)
T 3aog_A 26 GKDGGPWEIFTEQVDRVVPYLGRLAP---LAESLKRPKRVLIVDVPVRLDDGSVAYFEGYRVHHNTARGPAKGGVRYHPE 102 (440)
T ss_dssp TTCCTHHHHHHHHHHHHGGGCGGGGG---GGGGGGSCSEEEEEEEEEECTTSCEEEEEEEEEEEECTTSSEECCEEECTT
T ss_pred CCCCCHHHHHHHHHHHHHHHhCCCHH---HHHHhcCCCeEEEEEEEEEecCCCEEEEEEEEEEECCCCCCCcCCeEEEec
Confidence 33478999999999999999999997 999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHhhhhhccCCCCCCCceEEEeCCCCCCCHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCChhHHHHHH
Q 006671 285 MNLSIAKFLGFEQTLKNALSPYKLGGAAGGSDFDPKGKSDNEIMRFCQSFMNEIHRYLGPDKDLPSEEMGVGTREMGYLF 364 (636)
Q Consensus 285 v~~~evkaLA~~MT~KnAL~gLP~GGaKGGI~~DP~~~S~~El~r~~r~f~~eL~~~IGp~~DVpA~DiGt~~rem~~m~ 364 (636)
||++|+++||++|||||||++||||||||||+|||+++|+.|+|||||+|+++|.++|||++||||||+||+++||+||+
T Consensus 103 v~~~ev~~La~~mt~KnAl~~lP~GGgKGgi~~dP~~~s~~Eler~~r~f~~~l~~~iGp~~dvpA~DvGt~~~~m~~~~ 182 (440)
T 3aog_A 103 VTLSEVMALAGWMTIKNAAVGLPYGGGKGGIRVDPRKLSPGELERLTRRYTSEIGILLGPDRDIPAPDVNTGEREMAWMM 182 (440)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTCSCCEEEEEEECCGGGSCHHHHHHHHHHHHHHHGGGCBTTTEECCBCTTCCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhcCCCCCCcceEEecCCCCCCHHHHHHHHHHHHHHHHHhcCCCcEEECCCCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhhCCC-CccccCcccccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCcEEEEecCccHHHHHHHHHHHCCCEEE
Q 006671 365 GQYRRLAGHF-QGSFTGPRIFWSGSSLRTEATGYGLVFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPV 443 (636)
Q Consensus 365 ~~y~~l~g~~-~g~vTGKp~~~GGs~~r~eATG~GV~~~~~~~l~~~g~~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVV 443 (636)
++|+++++.+ +|++||||+.+|||.+|++||||||+++++++++++|.+++|+||+||||||||+++|++|+++|+|||
T Consensus 183 ~~y~~~~~~~~~g~vTGkp~~~GGs~~r~~aTg~Gv~~~~~~~~~~~g~~l~g~~vaVqGfGnVG~~~a~~L~e~GakvV 262 (440)
T 3aog_A 183 DTYSMNVGRTVPGVVTGKPIALGGSLGRRDATGRGVFITAAAAAEKIGLQVEGARVAIQGFGNVGNAAARAFHDHGARVV 262 (440)
T ss_dssp HHHHHHHTSCCGGGSSSCCGGGTCCTTCTTHHHHHHHHHHHHHHHHHTCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHhhCCCCCCeEeccchhhCCCCCCCcchHHHHHHHHHHHHHhcCCCccCCEEEEeccCHHHHHHHHHHHHCCCEEE
Confidence 9999999987 599999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeCCCCccccccceEecCCCcCccchhhHHHhhhcC
Q 006671 444 SVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKPWNERCDVAFPCASQNEIDQSDAINLVNSG 523 (636)
Q Consensus 444 aVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~~~eil~~~cDIliPcA~~n~It~enA~~l~~~~ 523 (636)
+|||++|+||||+|||+++| .++++.++++.+| +++++++++++|+++||||+|||++|+||.+||.+| +
T Consensus 263 avsD~~G~i~dp~Gld~~~l---~~~~~~~g~i~~y----~~a~~i~~~ei~~~~~DIlvPcA~~n~i~~~na~~l---~ 332 (440)
T 3aog_A 263 AVQDHTGTVYNEAGIDPYDL---LRHVQEFGGVRGY----PKAEPLPAADFWGLPVEFLVPAALEKQITEQNAWRI---R 332 (440)
T ss_dssp EEECSSCEEECTTCCCHHHH---HHHHHHTSSSTTC----TTSEECCHHHHTTCCCSEEEECSSSSCBCTTTGGGC---C
T ss_pred EEEcCCcEEECCCCCCHHHH---HHHHHhcCCcccC----CCceEcCchhhhcCCCcEEEecCCcCccchhhHHHc---C
Confidence 99999999999999999886 5566678888876 678888888899999999999999999999999999 9
Q ss_pred ceEEEeCCCCCCCHHHHHHHHHCCceEecccccccccceeecchhccccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q 006671 524 CRILVEGSNMPCTPEAVDVLKKANVLIAPAMAAGAGGVVAGELELNQECNMVHWSPEDFESKLQEAMKQTYQRALKAATD 603 (636)
Q Consensus 524 akiVvEgAN~P~T~eA~~iL~~rGIlviPD~~aNAGGVivS~~E~~qN~~~~~ws~eeV~~rL~~~m~~~~~~v~~~A~~ 603 (636)
||+||||||+|+||+|+++|++|||+|+||+++|||||++|||||+||+++++|++|+|+++|+++|.++|.+|+++|++
T Consensus 333 ak~VvEgAN~p~t~eA~~iL~~~GI~~~PD~~aNaGGV~vS~~E~~qN~~~~~w~~eev~~~l~~im~~~~~~v~~~a~~ 412 (440)
T 3aog_A 333 ARIVAEGANGPTTPAADDILLEKGVLVVPDVIANAGGVTVSYFEWVQDFNSYFWTEEEINARLERVLRNAFEAVWQVAQE 412 (440)
T ss_dssp CSEEECCSSSCBCHHHHHHHHHHTCEEECHHHHTTHHHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEecCccccCHHHHHHHHHCCCEEEChHHHhCCCceEEEEEEEecCccCcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCC
Q 006671 604 FGYQKESPEALVHGAVISSFLTIAQAMTDQGCV 636 (636)
Q Consensus 604 ~~~~~~~~~~~~~aA~i~a~~rVa~Am~~~G~~ 636 (636)
+++ +++.|||++||+||++||.+||++
T Consensus 413 ~~~------~~~~aA~~~a~~rva~a~~~~G~~ 439 (440)
T 3aog_A 413 KKI------PLRTAAYVVAATRVLEARALRGLY 439 (440)
T ss_dssp HTC------CHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred HCc------CHHHHHHHHHHHHHHHHHHhcCCC
Confidence 998 899999999999999999999986
No 7
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=100.00 E-value=1.1e-122 Score=998.79 Aligned_cols=409 Identities=26% Similarity=0.430 Sum_probs=395.2
Q ss_pred CCCccHHHHHHHHHHHHHHHHHhCccchHHHHhhcCCCeEEEEEEeEEcCCCCEEEEEEEEEEecCCCCCCCCCeEEecC
Q 006671 205 PHEIEFIQSVQESLHALERVIAKNSHYVNIMERLLEPERMIVFRVPWVDDRGETHVNRGFRVQFSQALGPCRGGLRFHPS 284 (636)
Q Consensus 205 p~~~ef~q~v~e~~~~~~~~l~~~p~y~~i~e~L~ePer~i~f~vp~~dd~G~v~v~rGyRVqhs~alGPakGGlRfhp~ 284 (636)
+..+.|+|++++++++++|+|+.+|+ ++++|++|+|+|+|+|||+||+|++++|+|||||||+++|||||||||||+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~P~r~i~~~~p~~~D~G~~~~~~g~rv~hn~~~GPakGGiR~~p~ 85 (419)
T 3aoe_E 9 PEDPGLWDTYLEWLERALKVAGVHPT---TLEYLAHPKRLVTLSLPVVMDDGKVRIFQGYRVVHDIARGPAKGGVRLDPG 85 (419)
T ss_dssp SSCCHHHHHHHHHHHHHHTTSCCCHH---HHHHHTSCSEEEEEEEEEECTTSCEEEEEEEEEEEECSSSSEEEEEEECTT
T ss_pred CCCCCHHHHHHHHHHHHHHHhCCCHH---HHhhcCCCCeEEEEEEEEEecCCCEEEEEEEEEEECCCCCCCcCCeEecCC
Confidence 44567999999999999999999997 999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHhhhhhccCCCCCCCceEEEeCCCCCCCHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCChhHHHHHH
Q 006671 285 MNLSIAKFLGFEQTLKNALSPYKLGGAAGGSDFDPKGKSDNEIMRFCQSFMNEIHRYLGPDKDLPSEEMGVGTREMGYLF 364 (636)
Q Consensus 285 v~~~evkaLA~~MT~KnAL~gLP~GGaKGGI~~DP~~~S~~El~r~~r~f~~eL~~~IGp~~DVpA~DiGt~~rem~~m~ 364 (636)
+|++|+++||++|||||||++||||||||||++||+++|+.|+|||||+|+++|.++|||++||||||+||+++||+||+
T Consensus 86 v~~~ev~~La~~mt~KnAl~~lP~GGgKGgi~~dP~~~s~~El~r~~r~f~~~l~~~iGp~~dvpA~DvGt~~~~m~~~~ 165 (419)
T 3aoe_E 86 VTLGQTAGLAAWMTLKAAVYDLPFGGAAGGIAVDPKGLSPQELERLVRRYTAELVGLIGPDSDILGPDLGADQQVMAWIM 165 (419)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTCSCEEEEEEECSCGGGSCHHHHHHHHHHHHHHHTTTCBTTTEEEEEBTTBCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhccCCCCCccEEEecCCCCCCHHHHHHHHHHHHHHHHHhcCCCCEEECCCCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhhCCC-CccccCcccccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCcEEEEecCccHHHHHHHHHHHCCCEEE
Q 006671 365 GQYRRLAGHF-QGSFTGPRIFWSGSSLRTEATGYGLVFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPV 443 (636)
Q Consensus 365 ~~y~~l~g~~-~g~vTGKp~~~GGs~~r~eATG~GV~~~~~~~l~~~g~~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVV 443 (636)
++|+++++++ ++++||||+.+|||.+|+++|||||+++++++++++|.+++|+||+||||||||+++|++|++.|+|||
T Consensus 166 ~~y~~~~~~~~~~~vtGk~~~~GGs~~r~~aTg~Gv~~~~~~~~~~~g~~l~gk~vaVqG~GnVG~~~a~~L~~~GakVV 245 (419)
T 3aoe_E 166 DTYSMTVGSTVPGVVTGKPHALGGSEGRDDAAGLGALLVLEALAKRRGLDLRGARVVVQGLGQVGAAVALHAERLGMRVV 245 (419)
T ss_dssp HHHHHHHTSCCGGGBSSCCGGGTCCSSCSCHHHHHHHHHHHHHHHHHTCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHhhCCCCCCeeeccchhcCCCCCCccchHHHHHHHHHHHHHhcCCCccCCEEEEECcCHHHHHHHHHHHHCCCEEE
Confidence 9999999987 599999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeCCCCccccccceEecCCCcCccchhhHHHhhhcC
Q 006671 444 SVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKPWNERCDVAFPCASQNEIDQSDAINLVNSG 523 (636)
Q Consensus 444 aVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~~~eil~~~cDIliPcA~~n~It~enA~~l~~~~ 523 (636)
+|||++|+||||+|||+++| .+++++++++.+| .++++++|.++||||+|||++|+||.+||++| +
T Consensus 246 avsD~~G~i~dp~Gld~~~l---~~~~~~~g~v~~~--------~~~~~e~~~~~~DVliP~A~~n~i~~~~A~~l---~ 311 (419)
T 3aoe_E 246 AVATSMGGMYAPEGLDVAEV---LSAYEATGSLPRL--------DLAPEEVFGLEAEVLVLAAREGALDGDRARQV---Q 311 (419)
T ss_dssp EEEETTEEEECTTCCCHHHH---HHHHHHHSSCSCC--------CBCTTTGGGSSCSEEEECSCTTCBCHHHHTTC---C
T ss_pred EEEcCCCeEECCCCCCHHHH---HHHHHhhCCccee--------eccchhhhccCceEEEecccccccccchHhhC---C
Confidence 99999999999999999986 4556667778766 24667899999999999999999999999999 9
Q ss_pred ceEEEeCCCCCCCHHHHHHHHHCCceEecccccccccceeecchhccccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q 006671 524 CRILVEGSNMPCTPEAVDVLKKANVLIAPAMAAGAGGVVAGELELNQECNMVHWSPEDFESKLQEAMKQTYQRALKAATD 603 (636)
Q Consensus 524 akiVvEgAN~P~T~eA~~iL~~rGIlviPD~~aNAGGVivS~~E~~qN~~~~~ws~eeV~~rL~~~m~~~~~~v~~~A~~ 603 (636)
||+|+||||+|+||+|+++|++|||+|+||+++|||||++|||||+||+++++|++|+|+++|+++|.++|.+|+++|++
T Consensus 312 ak~V~EgAN~p~t~~A~~~L~~~Gi~~~PD~~aNaGGV~~S~~E~~qn~~~~~w~~eev~~~l~~im~~~~~~v~~~a~~ 391 (419)
T 3aoe_E 312 AQAVVEVANFGLNPEAEAYLLGKGALVVPDLLSGGGGLLASYLEWVQDLNMFFWSPEEVRERFETRVARVVDAVCRRAER 391 (419)
T ss_dssp CSEEEECSTTCBCHHHHHHHHHHTCEEECHHHHTCHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEECCCCcCCHHHHHHHHHCCCEEECHHHHhCCCchhhHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCC
Q 006671 604 FGYQKESPEALVHGAVISSFLTIAQAMTDQGCV 636 (636)
Q Consensus 604 ~~~~~~~~~~~~~aA~i~a~~rVa~Am~~~G~~ 636 (636)
+++ +++.|||++||+||++||.+||++
T Consensus 392 ~~~------~~~~aA~~~a~~rv~~a~~~~G~~ 418 (419)
T 3aoe_E 392 GGL------DLRMGALALALERLDEATRLRGVY 418 (419)
T ss_dssp HTC------CHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred HCc------CHHHHHHHHHHHHHHHHHHhcCCC
Confidence 998 899999999999999999999985
No 8
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=100.00 E-value=3.6e-122 Score=996.02 Aligned_cols=409 Identities=24% Similarity=0.447 Sum_probs=379.5
Q ss_pred cHHHHHHHHHHHHHHHHHhCccchHHHHhhcCCCeEEEEEEeEEcCCCCEEEEEEEEEEecCCCCCCCCCeEEecCCCHH
Q 006671 209 EFIQSVQESLHALERVIAKNSHYVNIMERLLEPERMIVFRVPWVDDRGETHVNRGFRVQFSQALGPCRGGLRFHPSMNLS 288 (636)
Q Consensus 209 ef~q~v~e~~~~~~~~l~~~p~y~~i~e~L~ePer~i~f~vp~~dd~G~v~v~rGyRVqhs~alGPakGGlRfhp~v~~~ 288 (636)
.|+|++++++++++|+|+.+|. ++++|++|+|+|+|+|||+||+|++++|+|||||||+++|||||||||||++|++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~p~r~i~~~~p~~~d~G~~~~~~g~rv~hn~~~GP~kGGiR~~p~v~~~ 82 (421)
T 2yfq_A 6 NPLVAAQEKVRIACEKLGCDPA---VYELLKEPQRVIEISIPVKMDDGTVKVFKGWRSAHSSAVGPSKGGVRFHPNVNMD 82 (421)
T ss_dssp CHHHHHHHHHHHHHHHHTCCHH---HHHHHSSCSEEEEEEEEEEETTTEEEEEEEEEEECCCSSSSEEEEEEEESSCCHH
T ss_pred CHHHHHHHHHHHHHHHhCCCHH---HHhhccCCceEEEEEEEEEecCCCEEEEEEEEEEECCCCCCCcCCEEeeCCCCHH
Confidence 5899999999999999999996 9999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhhccCCCCCCCceEEEeCCCCCCCHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCChhHHHHHHHHhh
Q 006671 289 IAKFLGFEQTLKNALSPYKLGGAAGGSDFDPKGKSDNEIMRFCQSFMNEIHRYLGPDKDLPSEEMGVGTREMGYLFGQYR 368 (636)
Q Consensus 289 evkaLA~~MT~KnAL~gLP~GGaKGGI~~DP~~~S~~El~r~~r~f~~eL~~~IGp~~DVpA~DiGt~~rem~~m~~~y~ 368 (636)
|+++||++|||||||++||||||||||++||+++|+.|+|||||+|+++|.++|||++||||||+||+++||+||+++|+
T Consensus 83 ev~~La~~mt~KnAl~~lP~GGgKggi~~dP~~~s~~el~r~~r~f~~~l~~~iG~~~dvpA~Dvgt~~~~m~~~~~~y~ 162 (421)
T 2yfq_A 83 EVKALSLWMTFKGGALGLPYGGGKGGICVDPAELSERELEQLSRGWVRGLYKYLGDRIDIPAPDVNTNGQIMSWFVDEYV 162 (421)
T ss_dssp HHHHHHHHHHHHHHHHTCSCEEEEEEEECCGGGSCHHHHHHHHHHHHHHHGGGCBTTTEEEEECTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCCCcceEEecCCCCCCHHHHHHHHHHHHHHHHHhcCCCcEEECCCCCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhCCC--CccccCcccccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCcEEEEecCccHHHHHHHHHHHCCCEEEEEe
Q 006671 369 RLAGHF--QGSFTGPRIFWSGSSLRTEATGYGLVFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVS 446 (636)
Q Consensus 369 ~l~g~~--~g~vTGKp~~~GGs~~r~eATG~GV~~~~~~~l~~~g~~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVS 446 (636)
++++.+ ++++||||+.+|||.+|++||||||+++++++++++|.+++|+||+||||||||+++|++|+++|+|||+||
T Consensus 163 ~~~~~~~~~~~vtGk~~~~GGs~~r~~aTg~Gv~~~~~~~~~~~g~~l~g~~vaVqG~GnVG~~~a~~L~~~GakvVavs 242 (421)
T 2yfq_A 163 KLNGERMDIGTFTGKPVAFGGSEGRNEATGFGVAVVVRESAKRFGIKMEDAKIAVQGFGNVGTFTVKNIERQGGKVCAIA 242 (421)
T ss_dssp HHTTTCCCGGGSCSCCGGGTCCTTCTTHHHHHHHHHHHHHHHHTTCCGGGSCEEEECCSHHHHHHHHHHHHTTCCEEECC
T ss_pred HhhCCCCCCCEEecCchhcCCCCCCCcchHHHHHHHHHHHHHhcCCCccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEE
Confidence 999985 599999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCC-----CceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeCCCCccccccceEecCCCcCccchhhHHHhhh
Q 006671 447 DAK-----GYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKPWNERCDVAFPCASQNEIDQSDAINLVN 521 (636)
Q Consensus 447 Ds~-----G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~~~eil~~~cDIliPcA~~n~It~enA~~l~~ 521 (636)
|++ |+||||+|||+++| .++++.++++.+| +++++++++++|+++||||+|||++|+||.+||.+|
T Consensus 243 D~~~~~~~G~i~d~~Gld~~~l---~~~~~~~g~i~~~----~~a~~i~~~~~~~~~~DIliP~A~~n~i~~~~A~~l-- 313 (421)
T 2yfq_A 243 EWDRNEGNYALYNENGIDFKEL---LAYKEANKTLIGF----PGAERITDEEFWTKEYDIIVPAALENVITGERAKTI-- 313 (421)
T ss_dssp BCCSSSCSBCCBCSSCCCHHHH---HHHHHHHCC-------------------------CEEECSCSSCSCHHHHTTC--
T ss_pred ecCCCccceEEECCCCCCHHHH---HHHHHhcCCcccC----CCceEeCccchhcCCccEEEEcCCcCcCCcccHHHc--
Confidence 999 99999999999886 4566667888876 678888889999999999999999999999999999
Q ss_pred cCceEEEeCCCCCCCHHHHHHHHHCCceEecccccccccceeecchhccccCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 006671 522 SGCRILVEGSNMPCTPEAVDVLKKANVLIAPAMAAGAGGVVAGELELNQECNMVHWSPEDFESKLQEAMKQTYQRALKAA 601 (636)
Q Consensus 522 ~~akiVvEgAN~P~T~eA~~iL~~rGIlviPD~~aNAGGVivS~~E~~qN~~~~~ws~eeV~~rL~~~m~~~~~~v~~~A 601 (636)
+||+||||||+|+||+|+++|+++||+|+||+++|||||++|||||+||.++++|++|+|++||+++|.++|+++++.|
T Consensus 314 -~ak~VvEgAN~P~t~ea~~il~~~GI~~~Pd~~aNaGGV~vS~~E~~qN~~~~~w~~e~V~~~l~~~m~~~~~~v~~~A 392 (421)
T 2yfq_A 314 -NAKLVCEAANGPTTPEGDKVLTERGINLTPDILTNSGGVLVSYYEWVQNQYGYYWTEAEVEEKQEADMMKAIKGVFAVA 392 (421)
T ss_dssp -CCSEEECCSSSCSCHHHHHHHHHHTCEEECHHHHTTHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -CCeEEEeCCccccCHHHHHHHHHCCCEEEChHHHhCCCeEEEEEEEEecCccCcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCC
Q 006671 602 TDFGYQKESPEALVHGAVISSFLTIAQAMTDQGCV 636 (636)
Q Consensus 602 ~~~~~~~~~~~~~~~aA~i~a~~rVa~Am~~~G~~ 636 (636)
+++++ +++.|||++||+||++||++||++
T Consensus 393 ~~~g~------~~~~aA~~~a~~rv~~a~~~~G~~ 421 (421)
T 2yfq_A 393 DEYNV------TLREAVYMYAIKSIDVAMKLRGWY 421 (421)
T ss_dssp HHTTC------CHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHCc------CHHHHHHHHHHHHHHHHHHhcCCC
Confidence 99998 899999999999999999999986
No 9
>3mw9_A GDH 1, glutamate dehydrogenase 1; allostery, inhibition, oxidoreducta; HET: GLU GTP NAD; 2.40A {Bos taurus} SCOP: c.2.1.7 c.58.1.1 PDB: 3mvo_A* 3mvq_A* 3qmu_A* 3etd_A* 3ete_A* 3etg_A* 1l1f_A 1nr1_A 1nr7_A 1nqt_A 1hwx_A* 1hwy_A* 1hwz_A*
Probab=100.00 E-value=3.8e-121 Score=998.26 Aligned_cols=417 Identities=25% Similarity=0.454 Sum_probs=393.8
Q ss_pred CCCccHHHHHHHHHHHHHHHHHh---------------CccchHHHHhhcCCCeEEEEEEeEEcCCCCEEEEEEEEEEec
Q 006671 205 PHEIEFIQSVQESLHALERVIAK---------------NSHYVNIMERLLEPERMIVFRVPWVDDRGETHVNRGFRVQFS 269 (636)
Q Consensus 205 p~~~ef~q~v~e~~~~~~~~l~~---------------~p~y~~i~e~L~ePer~i~f~vp~~dd~G~v~v~rGyRVqhs 269 (636)
..+|+|+++|..+++.++.+++. .+.|..++++|++|+|+|+|+|||.||+|++++|+|||||||
T Consensus 4 ~~~~~f~~~v~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~p~r~i~~~vp~~~D~G~~~v~~GyRvqhn 83 (501)
T 3mw9_A 4 EDDPNFFKMVEGFFDRGASIVEDKLVEDLKTRETEEQKRNRVRSILRIIKPCNHVLSLSFPIRRDDGSWEVIEGYRAQHS 83 (501)
T ss_dssp TTCCCHHHHHHHHHHHHHHHHHHHHHHHCCCTTCSSHHHHHHHHHHHHHSSCSEEEEEEEEEECTTSCEEEEEEEEEECC
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCChhhhhhhhHHHHHHHhCCCeEEEEEEEEEeCCCCEEEeeeEEEEEC
Confidence 45789999999999999998874 245778999999999999999999999999999999999999
Q ss_pred CCCCCCCCCeEEecCCCHHHHHHHHHHhhhhhccCCCCCCCceEEEeCCCCCCCHHHHHHHHHHHHHHHHh--hcCCCCc
Q 006671 270 QALGPCRGGLRFHPSMNLSIAKFLGFEQTLKNALSPYKLGGAAGGSDFDPKGKSDNEIMRFCQSFMNEIHR--YLGPDKD 347 (636)
Q Consensus 270 ~alGPakGGlRfhp~v~~~evkaLA~~MT~KnAL~gLP~GGaKGGI~~DP~~~S~~El~r~~r~f~~eL~~--~IGp~~D 347 (636)
+++|||||||||||+||++|+++||++|||||||++||||||||||++||+++|+.|+|||||+||++|.+ ||||++|
T Consensus 84 ~a~GP~kGGiR~hp~v~l~ev~~La~~MT~KnAl~~LP~GGgKGgi~~DPk~~s~~El~r~~r~f~~eL~~~~~IGp~~d 163 (501)
T 3mw9_A 84 QHRTPCKGGIRYSTDVSVDEVKALASLMTYKCAVVDVPFGGAKAGVKINPKNYTDNELEKITRRFTMELAKKGFIGPGVD 163 (501)
T ss_dssp CSSSSEECCEEECTTCCHHHHHHHHHHHHHHHHHTTCCCEEEEEEECSCGGGSCHHHHHHHHHHHHHHHHHTTSCBTTTE
T ss_pred CCcCCCCCCeeecCCCCHHHHHHHHHHHHHHHHhcCCCCCCcceEEecCCccCCHHHHHHHHHHHHHHHhhccCCCCCee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999996 9999999
Q ss_pred ccCCCCCCChhHHHHHHHHhhhhhCCC----CccccCcccccCCCCCCCCcchhHHHHHHHHHHH------HhCC--CCC
Q 006671 348 LPSEEMGVGTREMGYLFGQYRRLAGHF----QGSFTGPRIFWSGSSLRTEATGYGLVFFAQLILA------DMNK--ELK 415 (636)
Q Consensus 348 VpA~DiGt~~rem~~m~~~y~~l~g~~----~g~vTGKp~~~GGs~~r~eATG~GV~~~~~~~l~------~~g~--~l~ 415 (636)
||||||||+++||+||+++|+++.|.+ ++++||||+.+|||++|++||||||+++++++++ .+|. +|+
T Consensus 164 ipApDvGt~~~eM~wm~d~y~~~~g~~~~~~~g~vTGKp~~~GGs~~r~eATg~GV~~~~~~~l~~~~~~~~~G~~~~l~ 243 (501)
T 3mw9_A 164 VPAPDMSTGEREMSWIADTYASTIGHYDINAHACVTGKPISQGGIHGRISATGRGVFHGIENFINEASYMSILGMTPGFG 243 (501)
T ss_dssp ECCBCTTCCHHHHHHHHHHHHHTTTTTCTTGGGSCSSCCGGGTCCTTTTTHHHHHHHHHHHHHHTCHHHHHHTTCCSSST
T ss_pred EecCCCCCCHHHHHHHHHHHHHHhCCCcccCCceeeCCcccccCCCCCCCchHHHHHHHHHHHHhhhHHHHHcCCCCCcC
Confidence 999999999999999999999999975 5899999999999999999999999999998664 5674 699
Q ss_pred CcEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeCCCCcc
Q 006671 416 GLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKPW 495 (636)
Q Consensus 416 GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~~~eil 495 (636)
|+||+||||||||+++|++|++.|+|||+|||++|+||||+|||+++| .++|++++++..| |+++++++ ++|
T Consensus 244 g~tVaVQG~GNVG~~aa~~L~e~GakVVavsDs~G~iyd~~Gid~~~l---~~~k~~~g~i~~~----~~a~~~~~-~il 315 (501)
T 3mw9_A 244 DKTFVVQGFGNVGLHSMRYLHRFGAKCITVGESDGSIWNPDGIDPKEL---EDFKLQHGTILGF----PKAKIYEG-SIL 315 (501)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCEEECTTCCCHHHH---HHHHHHHSSSTTC----TTSEEECS-CGG
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEEcCCceEECCCCCCHHHH---HHHHHhcCCeecc----cCceeecc-ccc
Confidence 999999999999999999999999999999999999999999999886 4567778888775 78888865 899
Q ss_pred ccccceEecCCCcCccchhhHHHhhhcCceEEEeCCCCCCCHHHHHHHHHCCceEecccccccccceeecchhccccCCC
Q 006671 496 NERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANVLIAPAMAAGAGGVVAGELELNQECNMV 575 (636)
Q Consensus 496 ~~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~~iL~~rGIlviPD~~aNAGGVivS~~E~~qN~~~~ 575 (636)
+++||||+|||++|+||.+||++| +||+||||||+|+||+|+++|++|||+|+||+++|||||++|||||+||++++
T Consensus 316 ~~~~DIliPcA~~n~I~~~na~~l---~akiV~EgAN~p~T~eA~~iL~~rGIl~~PD~~aNAGGV~vSy~E~~qn~~~~ 392 (501)
T 3mw9_A 316 EVDCDILIPAASEKQLTKSNAPRV---KAKIIAEGANGPTTPEADKIFLERNIMVIPDLYLNAGGVTVSYFEWLNNLNHV 392 (501)
T ss_dssp GSCCSEEEECSSSCCBCTTTGGGC---CCSEEECCSSSCBCHHHHHHHHHTTCEEECHHHHTTHHHHHHHHHHHHHHHCS
T ss_pred cccceEEeeccccCccCHhHHHHc---CceEEEeCCCCcCCHHHHHHHHHCCCEEEChHHhcCchHHhhHHHHHhccccc
Confidence 999999999999999999999999 99999999999999999999999999999999999999999999999999999
Q ss_pred C--------------CCHHHHHHHHHHH------------------------------------HHHHHHHHHHHHHHcC
Q 006671 576 H--------------WSPEDFESKLQEA------------------------------------MKQTYQRALKAATDFG 605 (636)
Q Consensus 576 ~--------------ws~eeV~~rL~~~------------------------------------m~~~~~~v~~~A~~~~ 605 (636)
+ |+.++|+++|+.. |.+++.+++++|++++
T Consensus 393 ~~grl~~~~e~~~~~w~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~ga~e~d~v~sgL~~~m~~a~~~v~~~a~~~~ 472 (501)
T 3mw9_A 393 SYGRLTFKYERDSNYHLLMSVQESLERKFGKHGGTIPIVPTAEFQDRISGASEKDIVHSGLAYTMERSARQIMRTAMKYN 472 (501)
T ss_dssp CTTTTTHHHHHHHHHHHHHHHHHHHHHHSCTTTCCCCCCCCHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred cccccchhhhcccccccHHHHHHHHHhhhcccccccccCchHHHHHHHcCCcHHHHHHHhHHHHHHHHHHHHHHHHHHhC
Confidence 5 9999999998876 9999999999999998
Q ss_pred CCCCCCccHHHHHHHHHHHHHHHHHHhcCCC
Q 006671 606 YQKESPEALVHGAVISSFLTIAQAMTDQGCV 636 (636)
Q Consensus 606 ~~~~~~~~~~~aA~i~a~~rVa~Am~~~G~~ 636 (636)
+ ..++|+|||+.|++||++||..+|+.
T Consensus 473 ~----~~~lRtAAy~~ai~rv~~a~~~~G~~ 499 (501)
T 3mw9_A 473 L----GLDLRTAAYVNAIEKVFRVYNEAGVT 499 (501)
T ss_dssp C----TTCHHHHHHHHHHHHHHHHHHHTTSC
T ss_pred C----CCCHHHHHHHHHHHHHHHHHHHcCcc
Confidence 4 22899999999999999999999974
No 10
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=100.00 E-value=1e-119 Score=974.92 Aligned_cols=411 Identities=27% Similarity=0.468 Sum_probs=396.1
Q ss_pred CccHHHHHHHHHHHHHHHHHhCccchHHHHhhcCCCeEEEEEEeEEcCCCCEEEEEEEEEEecCCCCCCCCCeEEecCCC
Q 006671 207 EIEFIQSVQESLHALERVIAKNSHYVNIMERLLEPERMIVFRVPWVDDRGETHVNRGFRVQFSQALGPCRGGLRFHPSMN 286 (636)
Q Consensus 207 ~~ef~q~v~e~~~~~~~~l~~~p~y~~i~e~L~ePer~i~f~vp~~dd~G~v~v~rGyRVqhs~alGPakGGlRfhp~v~ 286 (636)
++.|+|++++++++++|+|+.+|+ ++++|++|+|+|+|++||+||+|++++|+|||||||+++|||||||||||++|
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~P~r~i~~~~p~~~D~G~~~~~~g~rv~~~~~~GpakGGiR~~p~v~ 78 (415)
T 2tmg_A 2 EKSLYEMAVEQFNRAASLMDLESD---LAEVLRRPKRVLIVEFPVRMDDGHVEVFTGYRVQHNVARGPAKGGIRYHPDVT 78 (415)
T ss_dssp --CHHHHHHHHHHHHHHHTTCCHH---HHHHHHSCSEEEEEEEEEECTTSCEEEEEEEEEEEECTTSSEECCEEEESSCC
T ss_pred CCCHHHHHHHHHHHHHHHhCCCHH---HHHhcCCCCeEEEEEEEEEecCCcEEEEEEEEEEECCCCCCCCCcEEeeCCCC
Confidence 467999999999999999999997 99999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCCceEEEeCCCCCCCHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCChhHHHHHHHH
Q 006671 287 LSIAKFLGFEQTLKNALSPYKLGGAAGGSDFDPKGKSDNEIMRFCQSFMNEIHRYLGPDKDLPSEEMGVGTREMGYLFGQ 366 (636)
Q Consensus 287 ~~evkaLA~~MT~KnAL~gLP~GGaKGGI~~DP~~~S~~El~r~~r~f~~eL~~~IGp~~DVpA~DiGt~~rem~~m~~~ 366 (636)
++|+++||++|||||||++||+|||||||++||+++|+.|++||||+|+++|.++|||++||||||+||+++||+||+++
T Consensus 79 ~~ev~~La~~mt~KnAl~~lP~GG~KGgi~~dP~~~s~~e~~r~~r~f~~~l~~~ig~~~dvpa~D~gt~~~~m~~~~~~ 158 (415)
T 2tmg_A 79 LDEVKALAFWMTWKTAVMNLPFGGGKGGVRVDPKKLSRRELERLSRRFFREIQVIIGPYNDIPAPDVNTNADVIAWYMDE 158 (415)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSCCEEEEEEECCGGGSCHHHHHHHHHHHHHHTGGGCBTTTEECCBCTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCCcceEEeCCCCCCCHHHHHHHHHHHHHHHHHHhCCCcEEeCCCCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhCCC-CccccCcccccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCcEEEEecCccHHHHHHHHHHH-CCCEEEE
Q 006671 367 YRRLAGHF-QGSFTGPRIFWSGSSLRTEATGYGLVFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIA-YGAIPVS 444 (636)
Q Consensus 367 y~~l~g~~-~g~vTGKp~~~GGs~~r~eATG~GV~~~~~~~l~~~g~~l~GkrVaIqGfGNVG~~aAe~L~e-~GAkVVa 444 (636)
|+++++.. ++++||||+.+|||.+|+++|||||+++++++++++|.+++|+||+||||||||+++|++|++ +|+|||+
T Consensus 159 y~~~~~~~~~~~~tGk~~~~GGs~~r~~aTg~Gv~~~~~~~~~~~g~~l~g~~vaVqG~GnVG~~~a~~L~e~~GakvVa 238 (415)
T 2tmg_A 159 YEMNVGHTVLGIVTGKPVELGGSKGREEATGRGVKVCAGLAMDVLGIDPKKATVAVQGFGNVGQFAALLISQELGSKVVA 238 (415)
T ss_dssp HHHHHSSCCCCSCSSCCGGGTCCTTTTTHHHHHHHHHHHHHHHHTTCCTTTCEEEEECCSHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHhhCCCCCCeEecCchhhCCCCCcCcchHHHHHHHHHHHHHHcCCCcCCCEEEEECCcHHHHHHHHHHHHhcCCEEEE
Confidence 99999986 599999999999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred EeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeCCCCccccccceEecCCCcCccchhhHHHhhhcCc
Q 006671 445 VSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKPWNERCDVAFPCASQNEIDQSDAINLVNSGC 524 (636)
Q Consensus 445 VSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~~~eil~~~cDIliPcA~~n~It~enA~~l~~~~a 524 (636)
|||++|+||||+|||+++| .++++.++++.+| +++++++++++|+.+||||+|||++|+||++||.+| +|
T Consensus 239 vsD~~G~i~dp~Gld~~~l---~~~~~~~g~l~~y----~~a~~~~~~eil~~~~DIliP~A~~n~i~~~~a~~l---~a 308 (415)
T 2tmg_A 239 VSDSRGGIYNPEGFDVEEL---IRYKKEHGTVVTY----PKGERITNEELLELDVDILVPAALEGAIHAGNAERI---KA 308 (415)
T ss_dssp EECSSCEEECTTCCCHHHH---HHHHHHSSCSTTC----SSSEEECHHHHTTCSCSEEEECSSTTSBCHHHHTTC---CC
T ss_pred EEeCCCeEECCCCCCHHHH---HHHHHhhCCcccC----CCceEcCchhhhcCCCcEEEecCCcCccCcccHHHc---CC
Confidence 9999999999999999886 5666777888877 678888888899999999999999999999999999 99
Q ss_pred eEEEeCCCCCCCHHHHHHHHHCCceEecccccccccceeecchhccccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 006671 525 RILVEGSNMPCTPEAVDVLKKANVLIAPAMAAGAGGVVAGELELNQECNMVHWSPEDFESKLQEAMKQTYQRALKAATDF 604 (636)
Q Consensus 525 kiVvEgAN~P~T~eA~~iL~~rGIlviPD~~aNAGGVivS~~E~~qN~~~~~ws~eeV~~rL~~~m~~~~~~v~~~A~~~ 604 (636)
|+|+||||+|+||+|+++|+++||+|+||+++|||||++|||||+||+++++|++|+|+++|+++|.++|++++++|+++
T Consensus 309 k~V~EgAN~p~t~~a~~~l~~~Gi~~~PD~~aNaGGV~~s~~E~vqN~~~~~w~~e~v~~~l~~~m~~~~~~v~~~A~~~ 388 (415)
T 2tmg_A 309 KAVVEGANGPTTPEADEILSRRGILVVPDILANAGGVTVSYFEWVQDLQSFFWDLDQVRNALEKMMKGAFNDVMKVKEKY 388 (415)
T ss_dssp SEEECCSSSCBCHHHHHHHHHTTCEEECHHHHTCHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEeCCCcccCHHHHHHHHHCCCEEEChHHHhCCCceEEEEEEEecCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccHHHHHHHHHHHHHHHHHHhcCCC
Q 006671 605 GYQKESPEALVHGAVISSFLTIAQAMTDQGCV 636 (636)
Q Consensus 605 ~~~~~~~~~~~~aA~i~a~~rVa~Am~~~G~~ 636 (636)
++ ++++|||++|++||++||.+||++
T Consensus 389 g~------~~~~aA~~~a~~rv~~a~~~~G~~ 414 (415)
T 2tmg_A 389 NV------DMRTAAYILAIDRVAYATKKRGIY 414 (415)
T ss_dssp TC------CHHHHHHHHHHHHHHHHHHHC---
T ss_pred Cc------CHHHHHHHHHHHHHHHHHHhcCCC
Confidence 98 899999999999999999999975
No 11
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=100.00 E-value=1.5e-120 Score=982.55 Aligned_cols=410 Identities=26% Similarity=0.433 Sum_probs=396.7
Q ss_pred ccHHHHHHHHHHHHHHHHHhCccchHHHHhhcCCCeEEEEEEeEEcCCCCEEEEEEEEEEecCCCCCCCCCeEEecCCCH
Q 006671 208 IEFIQSVQESLHALERVIAKNSHYVNIMERLLEPERMIVFRVPWVDDRGETHVNRGFRVQFSQALGPCRGGLRFHPSMNL 287 (636)
Q Consensus 208 ~ef~q~v~e~~~~~~~~l~~~p~y~~i~e~L~ePer~i~f~vp~~dd~G~v~v~rGyRVqhs~alGPakGGlRfhp~v~~ 287 (636)
+.|+|++++++++++++|+.+|. ++++|++|+|+|.|++||+||+|++++|+|||||||+++|||||||||||++|+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~P~r~i~v~~p~~~D~G~~~~~~G~rv~~~~~~GpakGG~R~~p~v~~ 80 (421)
T 1v9l_A 4 TGFLEYVLNYVKKGVELGGFPED---FYKILSRPRRVLIVNIPVRLDGGGFEVFEGYRVQHCDVLGPYKGGVRFHPEVTL 80 (421)
T ss_dssp CHHHHHHHHHHHHHHHHTTCCHH---HHHHHHSCSEEEEEEEEEECSSSCEEEEEEEEEEEECSSSSEEEEEECCTTCCH
T ss_pred CCHHHHHHHHHHHHHHHhCCCHH---HHHhccCCceEEEEEEEEEecCCcEEEEEEEEeecCCcCCCccccEEecCCCCH
Confidence 56999999999999999999996 999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhhccCCCCCCCceEEEeCCCCCCCHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCChhHHHHHHHHh
Q 006671 288 SIAKFLGFEQTLKNALSPYKLGGAAGGSDFDPKGKSDNEIMRFCQSFMNEIHRYLGPDKDLPSEEMGVGTREMGYLFGQY 367 (636)
Q Consensus 288 ~evkaLA~~MT~KnAL~gLP~GGaKGGI~~DP~~~S~~El~r~~r~f~~eL~~~IGp~~DVpA~DiGt~~rem~~m~~~y 367 (636)
+|+++||++|||||||++||+|||||||++||+++|+.|++||||+|+++|.++|||++||||||+||+++||+||+++|
T Consensus 81 ~ev~~La~~mt~KnAl~~lP~GG~KGgi~~dP~~~s~~e~~r~~r~f~~~l~~~iG~~~dvpA~D~Gt~~~~m~~~~~~y 160 (421)
T 1v9l_A 81 ADDVALAILMTLKNSLAGLPYGGAKGAVRVDPKKLSQRELEELSRGYARAIAPLIGDVVDIPAPDVGTNAQIMAWMVDEY 160 (421)
T ss_dssp HHHHHHHHHHHHHHHHTTCSCCEEEEEECSCGGGSCHHHHHHHHHHHHHHHGGGCBTTTEEEECCTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCCCcceEEeCCCCCCCHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhCCC-CccccCcccccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCcEEEEecCccHHHHHHHHHHHCCCEEEEEe
Q 006671 368 RRLAGHF-QGSFTGPRIFWSGSSLRTEATGYGLVFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVS 446 (636)
Q Consensus 368 ~~l~g~~-~g~vTGKp~~~GGs~~r~eATG~GV~~~~~~~l~~~g~~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVS 446 (636)
+++++.. ++++||||+.+|||.+|+++|||||+++++++++++|.+++|+||+||||||||+++|++|+++|+|||+||
T Consensus 161 ~~~~~~~~~~~~tGk~~~~GGs~~r~~aTg~Gv~~~~~~~~~~~g~~l~gk~vaVqG~GnVG~~aa~~L~e~GakVVavs 240 (421)
T 1v9l_A 161 SKIKGYNVPGVFTSKPPELWGNPVREYATGFGVAVATREMAKKLWGGIEGKTVAIQGMGNVGRWTAYWLEKMGAKVIAVS 240 (421)
T ss_dssp HHHHTSCCGGGSCSCCSSSSCCGGGGGHHHHHHHHHHHHHHHHHHSCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEE
T ss_pred HHHhCCCCCCeEeccchhhCCCCCcccchHHHHHHHHHHHHHhcCCCcCCCEEEEECcCHHHHHHHHHHHHCCCEEEEEE
Confidence 9999986 499999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCceeCCCCCCHHHHHHHHHHHhhcCC--ccccccccCCc---eee-CCCCccccccceEecCCCcCccchhhHHHhh
Q 006671 447 DAKGYLVDEDGFDYMKISFLRDIKSQQRS--LRDYSKTYARS---KYY-DEAKPWNERCDVAFPCASQNEIDQSDAINLV 520 (636)
Q Consensus 447 Ds~G~IydpdGLDve~L~~L~~~k~~~g~--l~~y~~~~p~a---~~i-~~~eil~~~cDIliPcA~~n~It~enA~~l~ 520 (636)
|++|+||||+|||+++| .++++.+++ +.+| +++ +.+ +++++|+++||||+|||++|+||.+||++|
T Consensus 241 D~~G~i~dp~GlD~~~l---~~~k~~~g~~~v~~y----~~~~~~~~~~~~~~~~~~~~Dil~P~A~~~~I~~~~a~~l- 312 (421)
T 1v9l_A 241 DINGVAYRKEGLNVELI---QKNKGLTGPALVELF----TTKDNAEFVKNPDAIFKLDVDIFVPAAIENVIRGDNAGLV- 312 (421)
T ss_dssp CSSCEEECTTCCCTHHH---HHTTTSCHHHHHHHH----HHTSCCCCCSSTTGGGGCCCSEEEECSCSSCBCTTTTTTC-
T ss_pred CCCcEEECCCCCCHHHH---HHHHHhhCCcccccc----ccccCceEeCCchhhhcCCccEEEecCcCCccchhhHHHc-
Confidence 99999999999999885 566777777 8877 344 667 888999999999999999999999999999
Q ss_pred hcCceEEEeCCCCCCCHHHHHHHHHCCceEecccccccccceeecchhccccCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 006671 521 NSGCRILVEGSNMPCTPEAVDVLKKANVLIAPAMAAGAGGVVAGELELNQECNMVHWSPEDFESKLQEAMKQTYQRALKA 600 (636)
Q Consensus 521 ~~~akiVvEgAN~P~T~eA~~iL~~rGIlviPD~~aNAGGVivS~~E~~qN~~~~~ws~eeV~~rL~~~m~~~~~~v~~~ 600 (636)
+||+|+||||+|+||+|+++|++|||+|+||+++|||||++|||||+||+++++|++|+|+++|+++|.++|.+|+++
T Consensus 313 --~ak~V~EgAN~p~t~~a~~~l~~~Gi~~~PD~~aNaGGV~~S~~E~~qn~~~~~w~~e~v~~~l~~im~~~~~~v~~~ 390 (421)
T 1v9l_A 313 --KARLVVEGANGPTTPEAERILYERGVVVVPDILANAGGVIMSYLEWVENLQWYIWDEEETRKRLENIMVNNVERVYKR 390 (421)
T ss_dssp --CCSEEECCSSSCBCHHHHHHHHTTTCEEECHHHHSTHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --CceEEEecCCCcCCHHHHHHHHHCCCEEeChHHhhCCCeeeeHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HH-HcCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCC
Q 006671 601 AT-DFGYQKESPEALVHGAVISSFLTIAQAMTDQGCV 636 (636)
Q Consensus 601 A~-~~~~~~~~~~~~~~aA~i~a~~rVa~Am~~~G~~ 636 (636)
|+ ++++ +++.|||++||+||++||++||++
T Consensus 391 a~~~~~~------~~~~aA~~~a~~rv~~a~~~~G~~ 421 (421)
T 1v9l_A 391 WQREKGW------TMRDAAIVTALERIYNAMKIRGWI 421 (421)
T ss_dssp HTTSSSC------CHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHhhcCC------CHHHHHHHHHHHHHHHHHHhcCCC
Confidence 99 8888 899999999999999999999986
No 12
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=100.00 E-value=8.2e-107 Score=876.82 Aligned_cols=411 Identities=27% Similarity=0.417 Sum_probs=393.4
Q ss_pred CccHHHHHHHHHHHHHHHHHhCccchHHHHhhcCCCeEEEEEEeEEcCCCCEEEEEEEEEEecCCCCCCCCCeEEecCCC
Q 006671 207 EIEFIQSVQESLHALERVIAKNSHYVNIMERLLEPERMIVFRVPWVDDRGETHVNRGFRVQFSQALGPCRGGLRFHPSMN 286 (636)
Q Consensus 207 ~~ef~q~v~e~~~~~~~~l~~~p~y~~i~e~L~ePer~i~f~vp~~dd~G~v~v~rGyRVqhs~alGPakGGlRfhp~v~ 286 (636)
++.|+|++++++++++++|+.+|. ++++|++|+|+|.|++||+||+|++++|+|||||||+++|||||||||||++|
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~p~r~~~~~~p~~~d~G~~~~~~g~rv~~~~~~Gp~kGG~R~~~~~~ 78 (419)
T 1gtm_A 2 EADPYEIVIKQLERAAQYMEISEE---ALEFLKRPQRIVEVTIPVEMDDGSVKVFTGFRVQHNWARGPTKGGIRWHPEET 78 (419)
T ss_dssp -CTHHHHHHHHHHHHGGGSCCCHH---HHHHHTSCSEEEEEEEEEECTTSCEEEEEEEEEEEECTTSSEECCEEECTTCC
T ss_pred CccHHHHHHHHHHHHHHHhCCChh---hhhcCCCCceEEEEEEEEEecCCCEEEEEEEEEEECCCCCCCcCCEEeeCCCC
Confidence 467999999999999999999996 99999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCCceEEEeCCCCCCCHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCChhHHHHHHHH
Q 006671 287 LSIAKFLGFEQTLKNALSPYKLGGAAGGSDFDPKGKSDNEIMRFCQSFMNEIHRYLGPDKDLPSEEMGVGTREMGYLFGQ 366 (636)
Q Consensus 287 ~~evkaLA~~MT~KnAL~gLP~GGaKGGI~~DP~~~S~~El~r~~r~f~~eL~~~IGp~~DVpA~DiGt~~rem~~m~~~ 366 (636)
++|+++||++|||||||++||+|||||||++||+++|+.|++||||+|+++|.++|||++||||||+||+++||+||+++
T Consensus 79 ~~ev~~La~~mt~Knal~~lp~GG~Kggi~~dP~~~s~~e~~~~~r~f~~~l~~~~g~~~dv~a~D~gt~~~~m~~~~~~ 158 (419)
T 1gtm_A 79 LSTVKALAAWMTWKTAVMDLPYGGGKGGIIVDPKKLSDREKERLARGYIRAIYDVISPYEDIPAPDVYTNPQIMAWMMDE 158 (419)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSCEEEEEEEECCGGGSCHHHHHHHHHHHHHHHGGGCBTTTEECCBCTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCCceeEEecCCCCCCHHHHHHHHHHHHHHHHHhcCCCcEEeCCCCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhCCC-C--ccccCcccccCCCCCCCCcchhHHHHHHHHHHHHhCCC-CCCcEEEEecCccHHHHHHHHHHH-CCCE
Q 006671 367 YRRLAGHF-Q--GSFTGPRIFWSGSSLRTEATGYGLVFFAQLILADMNKE-LKGLRCVVSGSGKIAMHVLEKLIA-YGAI 441 (636)
Q Consensus 367 y~~l~g~~-~--g~vTGKp~~~GGs~~r~eATG~GV~~~~~~~l~~~g~~-l~GkrVaIqGfGNVG~~aAe~L~e-~GAk 441 (636)
|+++++.. + |++||||+.+|||.+|+++|||||+++++++++.+|.+ |+|+||.||||||||+++|++|.+ .|++
T Consensus 159 y~~~~~~~~~~~~~~tGk~~~~GGs~~~~~aTg~Gv~~~~~~~~~~~G~~~l~gktvgI~G~G~VG~~vA~~l~~~~G~k 238 (419)
T 1gtm_A 159 YETISRRKTPAFGIITGKPLSIGGSLGRIEATARGASYTIREAAKVLGWDTLKGKTIAIQGYGNAGYYLAKIMSEDFGMK 238 (419)
T ss_dssp HHHHHTTSSCGGGGCSSCCGGGTCCTTTTTHHHHHHHHHHHHHHHHTTCSCSTTCEEEEECCSHHHHHHHHHHHHTTCCE
T ss_pred HHHhhCCCCCccceEecCcchhCCCCCCCcchhhHHHHHHHHHHHHhCCcccCCCEEEEEcCCHHHHHHHHHHHHhcCCE
Confidence 99999986 5 89999999999999999999999999999999999998 999999999999999999999999 9999
Q ss_pred EEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeCCCCccccccceEecCCCcCccchhhHHHhhh
Q 006671 442 PVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKPWNERCDVAFPCASQNEIDQSDAINLVN 521 (636)
Q Consensus 442 VVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~~~eil~~~cDIliPcA~~n~It~enA~~l~~ 521 (636)
||+++|++|.+|+++|+|+++|. ++++...+|..| |..+.++.+++|..+||||||||.+++||++++..|
T Consensus 239 Vv~~sD~~g~~~~~~gvdl~~L~---~~~d~~~~l~~l----~~t~~i~~~~l~~mk~dilIn~ArG~~Vde~a~~aL-- 309 (419)
T 1gtm_A 239 VVAVSDSKGGIYNPDGLNADEVL---KWKNEHGSVKDF----PGATNITNEELLELEVDVLAPAAIEEVITKKNADNI-- 309 (419)
T ss_dssp EEEEECSSCEEEEEEEECHHHHH---HHHHHHSSSTTC----TTSEEECHHHHHHSCCSEEEECSCSCCBCTTGGGGC--
T ss_pred EEEEeCCCccccCccCCCHHHHH---HHHHhcCEeecC----ccCeeeCHHHHHhCCCCEEEECCCcccCCHHHHHHh--
Confidence 99999999999999999998864 444445666554 566678777889999999999999999999999888
Q ss_pred cCceEEEeCCCCCCCHHHHHHHHHCCceEecccccccccceeecchhccccCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 006671 522 SGCRILVEGSNMPCTPEAVDVLKKANVLIAPAMAAGAGGVVAGELELNQECNMVHWSPEDFESKLQEAMKQTYQRALKAA 601 (636)
Q Consensus 522 ~~akiVvEgAN~P~T~eA~~iL~~rGIlviPD~~aNAGGVivS~~E~~qN~~~~~ws~eeV~~rL~~~m~~~~~~v~~~A 601 (636)
+|+.|+||||+|+|+++..+|..+||++.||+++|||||++||+||+||+++++|+.+|++++|+++|.+++.+++++|
T Consensus 310 -~~~~I~~aAneP~t~~a~~ll~~~~V~itPhiaaNaGGvt~s~~E~~qn~~~~~w~~~ev~~~l~~~m~~~~~~~~~~a 388 (419)
T 1gtm_A 310 -KAKIVAEVANGPVTPEADEILFEKGILQIPDFLCNAGGVTVSYFEWVQNITGYYWTIEEVRERLDKKMTKAFYDVYNIA 388 (419)
T ss_dssp -CCSEEECCSSSCBCHHHHHHHHHTTCEEECHHHHTTHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -cCCEEEEeeCCCCCcchHHHHhcCCEEEECchhhhCCcceeeeehhhhcccccccCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCC
Q 006671 602 TDFGYQKESPEALVHGAVISSFLTIAQAMTDQGCV 636 (636)
Q Consensus 602 ~~~~~~~~~~~~~~~aA~i~a~~rVa~Am~~~G~~ 636 (636)
+++++ +++.|||++|++||++||.+||++
T Consensus 389 ~~~~~------~~~~aA~~~a~~rv~~a~~~~g~~ 417 (419)
T 1gtm_A 389 KEKNI------HMRDAAYVVAVQRVYQAMLDRGWV 417 (419)
T ss_dssp HHTTC------CHHHHHHHHHHHHHHHHHHHHTSS
T ss_pred HHHCc------CHHHHHHHHHHHHHHHHHHHcCCC
Confidence 99998 899999999999999999999985
No 13
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=100.00 E-value=2.6e-86 Score=703.21 Aligned_cols=336 Identities=21% Similarity=0.209 Sum_probs=303.0
Q ss_pred cCCCeEEEEEEeEEcCCCCEEEEEEEEEEecCCCCCCCCCeEEecCCCHH----HHHHHHHHhhhhhccCCCCCCCceEE
Q 006671 239 LEPERMIVFRVPWVDDRGETHVNRGFRVQFSQALGPCRGGLRFHPSMNLS----IAKFLGFEQTLKNALSPYKLGGAAGG 314 (636)
Q Consensus 239 ~ePer~i~f~vp~~dd~G~v~v~rGyRVqhs~alGPakGGlRfhp~v~~~----evkaLA~~MT~KnAL~gLP~GGaKGG 314 (636)
..||+++.++-| ...++|||||||+++|||||||||||++|++ |+++||++|||||||++|||||||||
T Consensus 8 ~~~e~v~~~~d~-------~~~~~~~~~~h~~~~GP~kGG~R~~p~v~~~~~~~ev~~La~~mt~K~al~~lp~GG~Kgg 80 (355)
T 1c1d_A 8 WDGEMTVTRFDA-------MTGAHFVIRLDSTQLGPAAGGTRAAQYSNLADALTDAGKLAGAMTLKMAVSNLPMGGGKSV 80 (355)
T ss_dssp CCSSEEEEEEET-------TTTEEEEEEEEECSSSSEEEEEEEECCSSHHHHHHHHHHHHHHHHHHHHHTTCSCEEEEEE
T ss_pred CCccEEEEEEcc-------ccceEEEEEEECCCCCCCCCcEEecCCCChHHHHHHHHHHHHHHHHHHHhhCCCCCCceee
Confidence 579998887654 2336999999999999999999999999975 78899999999999999999999999
Q ss_pred EeC-CCCC-CCHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCChhHHHHHHHHhhhhhCCCCccccCcccccCCCCCCC
Q 006671 315 SDF-DPKG-KSDNEIMRFCQSFMNEIHRYLGPDKDLPSEEMGVGTREMGYLFGQYRRLAGHFQGSFTGPRIFWSGSSLRT 392 (636)
Q Consensus 315 I~~-DP~~-~S~~El~r~~r~f~~eL~~~IGp~~DVpA~DiGt~~rem~~m~~~y~~l~g~~~g~vTGKp~~~GGs~~r~ 392 (636)
|++ ||+. +|..|.++++|+|.+.+..++|+ ||||||+||+++||+||+++|+ ++||||+.+|||.+|+
T Consensus 81 i~~~dP~~~~s~~~~e~~~r~~~~~~~~l~g~--~ipa~D~gt~~~~m~~~~~~~~--------~~tGk~~~~GGs~~~~ 150 (355)
T 1c1d_A 81 IALPAPRHSIDPSTWARILRIHAENIDKLSGN--YWTGPDVNTNSADMDTLNDTTE--------FVFGRSLERGGAGSSA 150 (355)
T ss_dssp EECSSCGGGCCHHHHHHHHHHHHHHHHHTTTS--EEEEECTTCCHHHHHHHHHHCS--------CBCCCCGGGTSCCCCH
T ss_pred EeccCcccccChhhHHHHHHHHHHHHHHhcCC--cccCCCCCCCHHHHHHHHHhcC--------eeeccchhhCCCCCch
Confidence 999 9999 88888888777777777777764 9999999999999999999986 4899999999999999
Q ss_pred CcchhHHHHHHHHHHHHhCC-CCCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHh
Q 006671 393 EATGYGLVFFAQLILADMNK-ELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKS 471 (636)
Q Consensus 393 eATG~GV~~~~~~~l~~~g~-~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~ 471 (636)
++|||||++++++++++.|. +++||||+||||||||+++|++|.+.|+||| ++|++ .+. .++.
T Consensus 151 ~aTg~Gv~~~~~~~~~~~G~~~L~GktV~I~G~GnVG~~~A~~l~~~GakVv-vsD~~----------~~~----~~~a- 214 (355)
T 1c1d_A 151 FTTAVGVFEAMKATVAHRGLGSLDGLTVLVQGLGAVGGSLASLAAEAGAQLL-VADTD----------TER----VAHA- 214 (355)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEE-EECSC----------HHH----HHHH-
T ss_pred hHHHHHHHHHHHHHHHhcCCCCCCCCEEEEECcCHHHHHHHHHHHHCCCEEE-EEeCC----------ccH----HHHH-
Confidence 99999999999999999997 8999999999999999999999999999998 99973 221 1111
Q ss_pred hcCCccccccccCCceeeCCCCccccccceEecCCCcCccchhhHHHhhhcCceEEEeCCCCCCCH-HHHHHHHHCCceE
Q 006671 472 QQRSLRDYSKTYARSKYYDEAKPWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTP-EAVDVLKKANVLI 550 (636)
Q Consensus 472 ~~g~l~~y~~~~p~a~~i~~~eil~~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~-eA~~iL~~rGIlv 550 (636)
+.+ ++++++.+++|..+|||++|||++|+||.+++..+ +|++|+|+||+|+|+ +|.++|+++||+|
T Consensus 215 ---------~~~-ga~~v~~~ell~~~~DIliP~A~~~~I~~~~~~~l---k~~iVie~AN~p~t~~eA~~~L~~~gIlv 281 (355)
T 1c1d_A 215 ---------VAL-GHTAVALEDVLSTPCDVFAPCAMGGVITTEVARTL---DCSVVAGAANNVIADEAASDILHARGILY 281 (355)
T ss_dssp ---------HHT-TCEECCGGGGGGCCCSEEEECSCSCCBCHHHHHHC---CCSEECCSCTTCBCSHHHHHHHHHTTCEE
T ss_pred ---------Hhc-CCEEeChHHhhcCccceecHhHHHhhcCHHHHhhC---CCCEEEECCCCCCCCHHHHHHHHhCCEEE
Confidence 112 56777778899999999999999999999999999 999999999999885 9999999999999
Q ss_pred ecccccccccceeec-chhccccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCccHHHHHHHHHHHHHHHH
Q 006671 551 APAMAAGAGGVVAGE-LELNQECNMVHWSPEDFESKLQEAMKQTYQRALKAATDFGYQKESPEALVHGAVISSFLTIAQA 629 (636)
Q Consensus 551 iPD~~aNAGGVivS~-~E~~qN~~~~~ws~eeV~~rL~~~m~~~~~~v~~~A~~~~~~~~~~~~~~~aA~i~a~~rVa~A 629 (636)
+||+++|||||++|| ||| ++|++|+|++||+++| +++.+|++.|+++++ ++++||+++|++||++|
T Consensus 282 ~Pd~~aNaGGV~~s~~~E~------~~w~~e~v~~~l~~i~-~~~~~i~~~~~~~~~------~~~~aA~~~a~~rv~~a 348 (355)
T 1c1d_A 282 APDFVANAGGAIHLVGREV------LGWSESVVHERAVAIG-DTLNQVFEISDNDGV------TPDEAARTLAGRRAREA 348 (355)
T ss_dssp CCHHHHTTHHHHHHHHHHT------TCCCHHHHHHHHHTHH-HHHHHHHHHHHHHTC------CHHHHHHHHHHHHHHHT
T ss_pred ECCeEEcCCCeeeeeeehh------cCCCHHHHHHHHHHHH-HHHHHHHHHHHHhCc------CHHHHHHHHHHHHHHHH
Confidence 999999999999999 999 5899999999999988 889999999999999 89999999999999999
Q ss_pred HHhc
Q 006671 630 MTDQ 633 (636)
Q Consensus 630 m~~~ 633 (636)
|.++
T Consensus 349 ~~~~ 352 (355)
T 1c1d_A 349 STTT 352 (355)
T ss_dssp C---
T ss_pred Hhhc
Confidence 9764
No 14
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=100.00 E-value=7.6e-84 Score=686.52 Aligned_cols=337 Identities=19% Similarity=0.244 Sum_probs=305.0
Q ss_pred cCCCeEEEEEEeEEcCCCCEEEEEEEEEEecCCCCCCCCCeEEecCCCHH----HHHHHHHHhhhhhccCCCCCCCceEE
Q 006671 239 LEPERMIVFRVPWVDDRGETHVNRGFRVQFSQALGPCRGGLRFHPSMNLS----IAKFLGFEQTLKNALSPYKLGGAAGG 314 (636)
Q Consensus 239 ~ePer~i~f~vp~~dd~G~v~v~rGyRVqhs~alGPakGGlRfhp~v~~~----evkaLA~~MT~KnAL~gLP~GGaKGG 314 (636)
..||+++.++- . ...++|||||||+++|||||||||||++|++ |+++||++|||||||++|||||||||
T Consensus 10 ~~~e~v~~~~d----~---~~~~~~~~~~h~~~~Gp~kGG~R~~p~v~~~~~~~e~~~La~~mt~K~al~~lp~GG~Kgg 82 (364)
T 1leh_A 10 YDYEQLVFCQD----E---ASGLKAVIAIHDTTLGPALGGARMWTYNAEEEAIEDALRLARGMTYKNAAAGLNLGGGKTV 82 (364)
T ss_dssp HTCCEEEEEEE----T---TTTEEEEEEEEECSSSSEECCEEEECCSCHHHHHHHHHHHHHHHHHHHHHTTCSCEEEEEE
T ss_pred cCCeEEEEEEc----c---CcceEEEEEEECCCCCCCCCcEEecCCCChHHHHHHHHHHHHHHHHHHHhcCCCCcCcceE
Confidence 45999888764 2 2336999999999999999999999999976 78899999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCChhHHHHHHHHhhhhhCCCCccccCcccccCCCCCCCCc
Q 006671 315 SDFDPKGKSDNEIMRFCQSFMNEIHRYLGPDKDLPSEEMGVGTREMGYLFGQYRRLAGHFQGSFTGPRIFWSGSSLRTEA 394 (636)
Q Consensus 315 I~~DP~~~S~~El~r~~r~f~~eL~~~IGp~~DVpA~DiGt~~rem~~m~~~y~~l~g~~~g~vTGKp~~~GGs~~r~eA 394 (636)
|++||+++|.++++|+|.+||.+|. | +||||||+||+++||+||+++|+ ++||||+.+|||.+|+++
T Consensus 83 i~~dP~~~~~~~~~r~~~~~~~~l~---g--~~i~A~D~Gt~~~~m~~l~~~~~--------~~tGK~~~~ggs~~~~~a 149 (364)
T 1leh_A 83 IIGDPFADKNEDMFRALGRFIQGLN---G--RYITAEDVGTTVDDMDLIHQETD--------YVTGISPAFGSSGNPSPV 149 (364)
T ss_dssp EESCTTTTCCHHHHHHHHHHHHTTT---T--SEEBCBCTTCCHHHHHHHHTTCS--------CBCSCCHHHHHHCCHHHH
T ss_pred EeCCCCCCCHHHHHHHHHHHHHHhc---C--ceEEcccCCCCHHHHHHHHHhcc--------hhcccccccCCCCCcccc
Confidence 9999999998899998888998775 4 58999999999999999999986 589999999999999999
Q ss_pred chhHHHHHHHHHHHHh-CC-CCCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhh
Q 006671 395 TGYGLVFFAQLILADM-NK-ELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQ 472 (636)
Q Consensus 395 TG~GV~~~~~~~l~~~-g~-~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~ 472 (636)
|||||++++++++++. |. +|+|+||+|||+||||+++|++|.+.|++|| ++|. |.+++..+ .+.
T Consensus 150 Tg~GV~~~~~~~~~~~~G~~~L~GktV~V~G~G~VG~~~A~~L~~~GakVv-v~D~----------~~~~l~~~---a~~ 215 (364)
T 1leh_A 150 TAYGVYRGMKAAAKEAFGSDSLEGLAVSVQGLGNVAKALCKKLNTEGAKLV-VTDV----------NKAAVSAA---VAE 215 (364)
T ss_dssp HHHHHHHHHHHHHHHHHSSCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEE-EECS----------CHHHHHHH---HHH
T ss_pred hhhHHHHHHHHHHHhhccccCCCcCEEEEECchHHHHHHHHHHHHCCCEEE-EEcC----------CHHHHHHH---HHH
Confidence 9999999999999984 75 8999999999999999999999999999987 9985 44544222 221
Q ss_pred cCCccccccccCCceeeCCCCccccccceEecCCCcCccchhhHHHhhhcCceEEEeCCCCCCCH-HHHHHHHHCCceEe
Q 006671 473 QRSLRDYSKTYARSKYYDEAKPWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTP-EAVDVLKKANVLIA 551 (636)
Q Consensus 473 ~g~l~~y~~~~p~a~~i~~~eil~~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~-eA~~iL~~rGIlvi 551 (636)
+ ++++++.+++|..+|||++||+++++||.++++.+ +|++|+|+||+|+|+ ++.++|+++||+|+
T Consensus 216 ----------~-ga~~v~~~~ll~~~~DIvip~a~~~~I~~~~~~~l---g~~iV~e~An~p~t~~ea~~~L~~~Gi~~~ 281 (364)
T 1leh_A 216 ----------E-GADAVAPNAIYGVTCDIFAPCALGAVLNDFTIPQL---KAKVIAGSADNQLKDPRHGKYLHELGIVYA 281 (364)
T ss_dssp ----------H-CCEECCGGGTTTCCCSEEEECSCSCCBSTTHHHHC---CCSEECCSCSCCBSSHHHHHHHHHHTCEEC
T ss_pred ----------c-CCEEEChHHHhccCCcEeeccchHHHhCHHHHHhC---CCcEEEeCCCCCcccHHHHHHHHhCCCEEe
Confidence 2 45667777889999999999999999999999998 999999999999874 99999999999999
Q ss_pred cccccccccceeecchhccccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCccHHHHHHHHHHHHHHHHHH
Q 006671 552 PAMAAGAGGVVAGELELNQECNMVHWSPEDFESKLQEAMKQTYQRALKAATDFGYQKESPEALVHGAVISSFLTIAQAMT 631 (636)
Q Consensus 552 PD~~aNAGGVivS~~E~~qN~~~~~ws~eeV~~rL~~~m~~~~~~v~~~A~~~~~~~~~~~~~~~aA~i~a~~rVa~Am~ 631 (636)
||+++|||||++||||| ++|++|+|+++|+++| +++.+|++.|+++++ ++++||+++|++||++||.
T Consensus 282 Pd~~~NaGGv~~s~~E~------~~~~~e~v~~~l~~i~-~~~~~i~~~~~~~~~------~~~~aA~~~a~~ri~~a~~ 348 (364)
T 1leh_A 282 PDYVINAGGVINVADEL------YGYNRTRAMKRVDGIY-DSIEKIFAISKRDGV------PSYVAADRMAEERIAKVAK 348 (364)
T ss_dssp CHHHHTTHHHHHHHHGG------GCCCHHHHHHHHTHHH-HHHHHHHHHHHHTTC------CHHHHHHHHHHHHHHHHHH
T ss_pred cceeecCCceEEEEEee------cCCCHHHHHHHHHHHH-HHHHHHHHHHHHhCc------CHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999 5799999999999987 889999999999998 8999999999999999999
Q ss_pred hcCCC
Q 006671 632 DQGCV 636 (636)
Q Consensus 632 ~~G~~ 636 (636)
.||++
T Consensus 349 ~~~~~ 353 (364)
T 1leh_A 349 ARSQF 353 (364)
T ss_dssp TTCSC
T ss_pred hCCcc
Confidence 99964
No 15
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=97.85 E-value=3e-05 Score=81.41 Aligned_cols=178 Identities=18% Similarity=0.213 Sum_probs=107.2
Q ss_pred CcEEEEecCccHHHHHHHHHHHC-------CCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCcee
Q 006671 416 GLRCVVSGSGKIAMHVLEKLIAY-------GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKY 488 (636)
Q Consensus 416 GkrVaIqGfGNVG~~aAe~L~e~-------GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~ 488 (636)
-.+|+|.|+|+||+.+++.|.+. +.+|++|+|++...++++ +|.+++ ...+...+.+..+ .+
T Consensus 4 ~irVgIiG~G~VG~~~~~~L~~~~~~~~g~~l~lvaVad~~~~~~~~~-idl~~~---~~~~~~~g~~~~~-------~~ 72 (325)
T 3ing_A 4 EIRIILMGTGNVGLNVLRIIDASNRRRSAFSIKVVGVSDSRSYASGRN-LDISSI---ISNKEKTGRISDR-------AF 72 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHC--CEEEEEEEECSSBEEECSS-CCHHHH---HHHHHHHSCSCSS-------BC
T ss_pred eEEEEEEcCcHHHHHHHHHHHhchhhccCCCEEEEEEEecChhhcccc-cCHHHH---HHHhhhcCCCCcc-------cC
Confidence 36899999999999999999873 679999999999999998 998764 2222222323221 11
Q ss_pred eCCCCcc-ccccceEecCCCcCccc---hhhHHHhhhcCceEEEeCCCC-CCCHHHH---HHHHHCCceEeccccccccc
Q 006671 489 YDEAKPW-NERCDVAFPCASQNEID---QSDAINLVNSGCRILVEGSNM-PCTPEAV---DVLKKANVLIAPAMAAGAGG 560 (636)
Q Consensus 489 i~~~eil-~~~cDIliPcA~~n~It---~enA~~l~~~~akiVvEgAN~-P~T~eA~---~iL~~rGIlviPD~~aNAGG 560 (636)
+..+++ +.++||++-|+..+... .+.+...++.|..+|++ |- +++.++. +.-+++|+.+. +-++.||
T Consensus 73 -d~~e~l~~~~iDvVVe~T~~~~~~~pa~~~~~~aL~aGkhVVta--NK~~la~~~~eL~~lA~~~g~~~~--~Ea~vg~ 147 (325)
T 3ing_A 73 -SGPEDLMGEAADLLVDCTPASRDGVREYSLYRMAFESGMNVVTA--NKSGLANKWHDIMDSANQNSKYIR--YEATVAG 147 (325)
T ss_dssp -CSGGGGTTSCCSEEEECCCCCSSSHHHHHHHHHHHHTTCEEEEC--CCHHHHHHHHHHHHHHHHHTCCEE--CGGGSST
T ss_pred -CHHHHhcCCCCCEEEECCCCccccchHHHHHHHHHHCCCeEEEc--CchhHHHHHHHHHHHHHHcCCeEE--EEeeecc
Confidence 334444 46899999999876332 25566667889999964 42 3333333 33467788665 3444443
Q ss_pred ceeecchhccccCC--C-------CCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCC
Q 006671 561 VVAGELELNQECNM--V-------HWSPEDFESKLQEAMKQTYQRALKAATDFGYQKESP 611 (636)
Q Consensus 561 VivS~~E~~qN~~~--~-------~ws~eeV~~rL~~~m~~~~~~v~~~A~~~~~~~~~~ 611 (636)
-+=..-.+-+.+.. + .=|-.-+..++++ ...|.++++.|++.|..+..|
T Consensus 148 giPii~~l~~~l~g~~I~~i~Gi~nGT~nyil~~m~~--g~~f~~~l~~Aq~~GyaE~DP 205 (325)
T 3ing_A 148 GVPLFSVLDYSILPSKVKRFRGIVSSTINYVIRNMAN--GRSLRDVVDDAIKKGIAESNP 205 (325)
T ss_dssp TSCCHHHHHHTCTTCCEEEEEEECCHHHHHHHHHHHT--TCCHHHHHHHHHHHTCSCSST
T ss_pred cCHHHHHHHHHhhCCCeeEEEEEEEeeeeEEeecccC--CCCHHHHHHHHHHcCCCCCCc
Confidence 32111111110100 0 0011223333311 337899999999999865443
No 16
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=97.53 E-value=0.00063 Score=72.92 Aligned_cols=159 Identities=14% Similarity=0.157 Sum_probs=99.3
Q ss_pred CcccCCCCCCChhHHHHHHHHhhhhhCCCCccccCcccccCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCcEEEEecCc
Q 006671 346 KDLPSEEMGVGTREMGYLFGQYRRLAGHFQGSFTGPRIFWSGSSLRTEATGYGLVFFAQLILADMNKELKGLRCVVSGSG 425 (636)
Q Consensus 346 ~DVpA~DiGt~~rem~~m~~~y~~l~g~~~g~vTGKp~~~GGs~~r~eATG~GV~~~~~~~l~~~g~~l~GkrVaIqGfG 425 (636)
+.|-....|++.-|+.++... |-. +|.-| | ....+++-.++..+..+.+.++.++.|+||.|+|+|
T Consensus 60 k~I~~~~~G~D~iD~~~~~~~-----gI~---v~n~p----g--~~~~~vAE~~l~~lL~l~r~~~~~l~g~tvGIIGlG 125 (380)
T 2o4c_A 60 RFVGTCTIGTDHLDLDYFAEA-----GIA---WSSAP----G--CNARGVVDYVLGCLLAMAEVRGADLAERTYGVVGAG 125 (380)
T ss_dssp CEEEECSSCSTTBCHHHHHHH-----TCE---EECCT----T--TTHHHHHHHHHHHHHHHHHHHTCCGGGCEEEEECCS
T ss_pred eEEEEcCcccchhhHHHHHhC-----CCE---EEeCC----C--cChHHHHHHHHHHHHHHHhhhhcccCCCEEEEEeCC
Confidence 345667788888788776542 211 11111 1 123466667777777777888999999999999999
Q ss_pred cHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeCCCCccccccceEecC
Q 006671 426 KIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKPWNERCDVAFPC 505 (636)
Q Consensus 426 NVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~~~eil~~~cDIliPc 505 (636)
++|+.+|+.|...|++|++ .|. . .+. ... +..+.+-++++. +|||++.|
T Consensus 126 ~IG~~vA~~l~~~G~~V~~-~d~-------~---~~~--------~~~-----------g~~~~~l~ell~-~aDvV~l~ 174 (380)
T 2o4c_A 126 QVGGRLVEVLRGLGWKVLV-CDP-------P---RQA--------REP-----------DGEFVSLERLLA-EADVISLH 174 (380)
T ss_dssp HHHHHHHHHHHHTTCEEEE-ECH-------H---HHH--------HST-----------TSCCCCHHHHHH-HCSEEEEC
T ss_pred HHHHHHHHHHHHCCCEEEE-EcC-------C---hhh--------hcc-----------CcccCCHHHHHH-hCCEEEEe
Confidence 9999999999999999754 342 1 000 000 111111122222 79999888
Q ss_pred C---------CcCccchhhHHHhhhcCceEEEeCCCCC-CCHHH-HHHHHHCCceEe
Q 006671 506 A---------SQNEIDQSDAINLVNSGCRILVEGSNMP-CTPEA-VDVLKKANVLIA 551 (636)
Q Consensus 506 A---------~~n~It~enA~~l~~~~akiVvEgAN~P-~T~eA-~~iL~~rGIlvi 551 (636)
. +.+.|+.+....+ +.+ .+++..+.++ ++.+| .+.|++.+|..+
T Consensus 175 ~Plt~~g~~~T~~li~~~~l~~m-k~g-ailIN~sRG~vvd~~aL~~aL~~g~i~~A 229 (380)
T 2o4c_A 175 TPLNRDGEHPTRHLLDEPRLAAL-RPG-TWLVNASRGAVVDNQALRRLLEGGADLEV 229 (380)
T ss_dssp CCCCSSSSSCCTTSBCHHHHHTS-CTT-EEEEECSCGGGBCHHHHHHHHHTTCCEEE
T ss_pred ccCccccccchhhhcCHHHHhhC-CCC-cEEEECCCCcccCHHHHHHHHHhCCCceE
Confidence 7 4456766655554 223 4666777776 45444 577888777655
No 17
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=97.35 E-value=0.00069 Score=72.84 Aligned_cols=115 Identities=17% Similarity=0.191 Sum_probs=82.3
Q ss_pred HHHHHHHHHhCCCCCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCC---CCHHHHHHHHHHHhhcCCcc
Q 006671 401 FFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDG---FDYMKISFLRDIKSQQRSLR 477 (636)
Q Consensus 401 ~~~~~~l~~~g~~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdG---LDve~L~~L~~~k~~~g~l~ 477 (636)
.++..+++-.|.+++..||+|.|.|.+|..+|+.|...|++=|.+.|++|.|+.... |+..+.. +-.....
T Consensus 177 Aal~~A~~i~g~~l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~----~A~~~~~-- 250 (388)
T 1vl6_A 177 AAFLNALKLTEKKIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYHLE----IARITNP-- 250 (388)
T ss_dssp HHHHHHHHHHTCCTTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSHHHHH----HHHTSCT--
T ss_pred HHHHHHHHHhCCCCCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCcccCCCcccccCHHHHH----HHHhhhc--
Confidence 345555666688999999999999999999999999999966899999999987653 6543211 1111110
Q ss_pred ccccccCCceeeCCCCccc--cccceEecCCCcCccchhhHHHhhhcCceEEEeCCCCC
Q 006671 478 DYSKTYARSKYYDEAKPWN--ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMP 534 (636)
Q Consensus 478 ~y~~~~p~a~~i~~~eil~--~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgAN~P 534 (636)
+ .....+.+ ..+||+|=++..+.+|++-.+++.+ + .+|.+-|| |
T Consensus 251 -~---------~~~~~L~eav~~ADVlIG~Sap~l~t~emVk~Ma~-~-pIIfalSN-P 296 (388)
T 1vl6_A 251 -E---------RLSGDLETALEGADFFIGVSRGNILKPEWIKKMSR-K-PVIFALAN-P 296 (388)
T ss_dssp -T---------CCCSCHHHHHTTCSEEEECSCSSCSCHHHHTTSCS-S-CEEEECCS-S
T ss_pred -c---------CchhhHHHHHccCCEEEEeCCCCccCHHHHHhcCC-C-CEEEEcCC-C
Confidence 0 01112221 2579999999899999999888732 3 39999999 5
No 18
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=97.25 E-value=0.0017 Score=66.13 Aligned_cols=118 Identities=14% Similarity=0.155 Sum_probs=72.2
Q ss_pred HHHHHhCCCCCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccC
Q 006671 405 LILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYA 484 (636)
Q Consensus 405 ~~l~~~g~~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p 484 (636)
.++...+.++.|++|.|.|+|++|+.+|+.|...|++|+ +.|.+ .+++..+. + .
T Consensus 144 ~~l~~~~~~l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~-~~dr~----------~~~~~~~~---~-~----------- 197 (293)
T 3d4o_A 144 MAIQHTDFTIHGANVAVLGLGRVGMSVARKFAALGAKVK-VGARE----------SDLLARIA---E-M----------- 197 (293)
T ss_dssp HHHHHCSSCSTTCEEEEECCSHHHHHHHHHHHHTTCEEE-EEESS----------HHHHHHHH---H-T-----------
T ss_pred HHHHhcCCCCCCCEEEEEeeCHHHHHHHHHHHhCCCEEE-EEECC----------HHHHHHHH---H-C-----------
Confidence 344556789999999999999999999999999999854 55541 12221111 1 1
Q ss_pred CceeeCCCCc--cccccceEecCCCcCccchhhHHHhhhcCceEEEeCCCCCCCHHHHHHHHHCCceEe
Q 006671 485 RSKYYDEAKP--WNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANVLIA 551 (636)
Q Consensus 485 ~a~~i~~~ei--l~~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~~iL~~rGIlvi 551 (636)
+++.++.+++ +-..+||++-|...+.++.+....+ +.++. |+.-+-+|..-+- +..+++|+.++
T Consensus 198 g~~~~~~~~l~~~l~~aDvVi~~~p~~~i~~~~l~~m-k~~~~-lin~ar~~~~~~~-~~a~~~Gv~~~ 263 (293)
T 3d4o_A 198 GMEPFHISKAAQELRDVDVCINTIPALVVTANVLAEM-PSHTF-VIDLASKPGGTDF-RYAEKRGIKAL 263 (293)
T ss_dssp TSEEEEGGGHHHHTTTCSEEEECCSSCCBCHHHHHHS-CTTCE-EEECSSTTCSBCH-HHHHHHTCEEE
T ss_pred CCeecChhhHHHHhcCCCEEEECCChHHhCHHHHHhc-CCCCE-EEEecCCCCCCCH-HHHHHCCCEEE
Confidence 1121111111 1237999999998888887655544 33444 4455544421122 55567787664
No 19
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=97.23 E-value=0.0014 Score=71.89 Aligned_cols=109 Identities=15% Similarity=0.144 Sum_probs=67.3
Q ss_pred hHHHHHHHHHH-HHhCCCCCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCC
Q 006671 397 YGLVFFAQLIL-ADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRS 475 (636)
Q Consensus 397 ~GV~~~~~~~l-~~~g~~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~ 475 (636)
||+...+-..+ +..+..+.|++|.|.|+|+||+.+|+.|...|++| .+.|. || ... +.. ..
T Consensus 227 yG~~eslvdgI~Ratg~~L~GKTVgVIG~G~IGr~vA~~lrafGa~V-iv~d~-----dp-----~~a--~~A-~~---- 288 (464)
T 3n58_A 227 YGCKESLVDGIRRGTDVMMAGKVAVVCGYGDVGKGSAQSLAGAGARV-KVTEV-----DP-----ICA--LQA-AM---- 288 (464)
T ss_dssp HHHHHHHHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEE-EEECS-----SH-----HHH--HHH-HH----
T ss_pred hcchHHHHHHHHHhcCCcccCCEEEEECcCHHHHHHHHHHHHCCCEE-EEEeC-----Cc-----chh--hHH-Hh----
Confidence 44443333333 34578999999999999999999999999999995 45654 22 111 110 00
Q ss_pred ccccccccCCceeeCCCCccccccceEecCCC-cCccchhhHHHhhhcCceEEEeCCCCC
Q 006671 476 LRDYSKTYARSKYYDEAKPWNERCDVAFPCAS-QNEIDQSDAINLVNSGCRILVEGSNMP 534 (636)
Q Consensus 476 l~~y~~~~p~a~~i~~~eil~~~cDIliPcA~-~n~It~enA~~l~~~~akiVvEgAN~P 534 (636)
.+.++++-++++ ..+||++.|+. .+.|+.+....+ +.+|-+| --+.+.
T Consensus 289 --------~G~~vv~LeElL-~~ADIVv~atgt~~lI~~e~l~~M-K~GAILI-NvGRgd 337 (464)
T 3n58_A 289 --------DGFEVVTLDDAA-STADIVVTTTGNKDVITIDHMRKM-KDMCIVG-NIGHFD 337 (464)
T ss_dssp --------TTCEECCHHHHG-GGCSEEEECCSSSSSBCHHHHHHS-CTTEEEE-ECSSST
T ss_pred --------cCceeccHHHHH-hhCCEEEECCCCccccCHHHHhcC-CCCeEEE-EcCCCC
Confidence 122222222333 37899999873 568888877666 4456544 444443
No 20
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=97.13 E-value=0.0032 Score=62.94 Aligned_cols=136 Identities=15% Similarity=-0.006 Sum_probs=82.1
Q ss_pred HHHHHHhCCCCCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCcccccccc
Q 006671 404 QLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTY 483 (636)
Q Consensus 404 ~~~l~~~g~~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~ 483 (636)
..+|++.+.+++| ++.|.|.|++|+.+++.|.+.|++ |.|.|. +.++...+.+ ..+
T Consensus 105 ~~~l~~~~~~l~~-~v~iiG~G~~g~~~a~~l~~~g~~-v~v~~r----------~~~~~~~l~~---~~~--------- 160 (263)
T 2d5c_A 105 LEALKAGGIPLKG-PALVLGAGGAGRAVAFALREAGLE-VWVWNR----------TPQRALALAE---EFG--------- 160 (263)
T ss_dssp HHHHHHTTCCCCS-CEEEECCSHHHHHHHHHHHHTTCC-EEEECS----------SHHHHHHHHH---HHT---------
T ss_pred HHHHHHhCCCCCC-eEEEECCcHHHHHHHHHHHHCCCE-EEEEEC----------CHHHHHHHHH---Hhc---------
Confidence 3345566778999 999999999999999999999995 677776 2233222211 111
Q ss_pred CCceeeCCCCccccccceEecCCCcCccch--h--hHHHhhhcCceEEEeCCCCCCCHHHHHHHHHCCceEecccccccc
Q 006671 484 ARSKYYDEAKPWNERCDVAFPCASQNEIDQ--S--DAINLVNSGCRILVEGSNMPCTPEAVDVLKKANVLIAPAMAAGAG 559 (636)
Q Consensus 484 p~a~~i~~~eil~~~cDIliPcA~~n~It~--e--nA~~l~~~~akiVvEgAN~P~T~eA~~iL~~rGIlviPD~~aNAG 559 (636)
..+-+.++. .++||++-|...+.... . +...+ +.+ ++|++-+.+|...+-.+.++++|+.++|..-.-.+
T Consensus 161 --~~~~~~~~~--~~~Divi~~tp~~~~~~~~~~l~~~~l-~~g-~~viD~~~~p~~t~l~~~a~~~g~~~v~g~~mlv~ 234 (263)
T 2d5c_A 161 --LRAVPLEKA--REARLLVNATRVGLEDPSASPLPAELF-PEE-GAAVDLVYRPLWTRFLREAKAKGLKVQTGLPMLAW 234 (263)
T ss_dssp --CEECCGGGG--GGCSEEEECSSTTTTCTTCCSSCGGGS-CSS-SEEEESCCSSSSCHHHHHHHHTTCEEECSHHHHHH
T ss_pred --cchhhHhhc--cCCCEEEEccCCCCCCCCCCCCCHHHc-CCC-CEEEEeecCCcccHHHHHHHHCcCEEECcHHHHHH
Confidence 111111223 58999998887553210 1 12222 223 46668776674224566778899999987544444
Q ss_pred cceeecchhc
Q 006671 560 GVVAGELELN 569 (636)
Q Consensus 560 GVivS~~E~~ 569 (636)
..+.++..|.
T Consensus 235 q~~~a~~~w~ 244 (263)
T 2d5c_A 235 QGALAFRLWT 244 (263)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 4444444454
No 21
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=97.03 E-value=0.0011 Score=69.66 Aligned_cols=175 Identities=19% Similarity=0.306 Sum_probs=100.8
Q ss_pred cEEEEecCccHHHHHHHHHHHC---------CCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCce
Q 006671 417 LRCVVSGSGKIAMHVLEKLIAY---------GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSK 487 (636)
Q Consensus 417 krVaIqGfGNVG~~aAe~L~e~---------GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~ 487 (636)
.+|.|.|+|+||+..++.|.+. +.+|++|+|++....++ +|.++. + ..+.....+. .
T Consensus 3 irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~--id~~~~--~-~~~~~~~~~~------~--- 68 (327)
T 3do5_A 3 IKIAIVGFGTVGQGVAELLIRKREEIEKAIGEFKVTAVADSKSSISGD--FSLVEA--L-RMKRETGMLR------D--- 68 (327)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTHHHHHHHHCCEEEEEEECSSCEEESS--CCHHHH--H-HHHHHHSSCS------B---
T ss_pred EEEEEEeccHHHHHHHHHHHhhHHHHHhcCCCEEEEEEEeCChHhccc--cCHHHH--H-hhhccCcccc------C---
Confidence 4899999999999999999774 78999999999888887 776543 1 1111111110 0
Q ss_pred eeCCCCcc-ccccceEecCCCcCccc---hhhHHHhhhcCceEEEeCCC-CCCCHHH---HHHHHHCCceEecccccccc
Q 006671 488 YYDEAKPW-NERCDVAFPCASQNEID---QSDAINLVNSGCRILVEGSN-MPCTPEA---VDVLKKANVLIAPAMAAGAG 559 (636)
Q Consensus 488 ~i~~~eil-~~~cDIliPcA~~n~It---~enA~~l~~~~akiVvEgAN-~P~T~eA---~~iL~~rGIlviPD~~aNAG 559 (636)
..+.++++ +.++||++-|...+.-+ .+.+...++.|..+|+| | .|++... .+..+++|+.+. +-++.|
T Consensus 69 ~~d~~~ll~~~~iDvVv~~tp~~~h~~~a~~~~~~aL~aGkhVv~~--NKkpla~~~~eL~~~A~~~g~~~~--~ea~v~ 144 (327)
T 3do5_A 69 DAKAIEVVRSADYDVLIEASVTRVDGGEGVNYIREALKRGKHVVTS--NKGPLVAEFHGLMSLAERNGVRLM--YEATVG 144 (327)
T ss_dssp CCCHHHHHHHSCCSEEEECCCCC----CHHHHHHHHHTTTCEEEEC--CSHHHHHHHHHHHHHHHHTTCCEE--CGGGSS
T ss_pred CCCHHHHhcCCCCCEEEECCCCcccchhHHHHHHHHHHCCCeEEec--CchhhHHHHHHHHHHHHhhCCcEE--EEEEee
Confidence 01112334 35799999998755432 34455556889999987 2 2443333 344578898666 445444
Q ss_pred cceeecchhccccC-C--CC-----CC--HHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCC
Q 006671 560 GVVAGELELNQECN-M--VH-----WS--PEDFESKLQEAMKQTYQRALKAATDFGYQKESP 611 (636)
Q Consensus 560 GVivS~~E~~qN~~-~--~~-----ws--~eeV~~rL~~~m~~~~~~v~~~A~~~~~~~~~~ 611 (636)
+-+=. +..+++.. . +. .+ -.-+..++. .=...|++++..|++.|..+..|
T Consensus 145 ~g~Pi-i~~l~~~l~~~~I~~I~GIlnGT~nyilt~m~-~~g~~f~~~l~~Aq~~GyaE~DP 204 (327)
T 3do5_A 145 GAMPV-VKLAKRYLALCEIESVKGIFNGTCNYILSRME-EERLPYEHILKEAQELGYAEADP 204 (327)
T ss_dssp TTSCC-HHHHHTTTTTSCEEEEEEECCHHHHHHHHHHH-HHCCCHHHHHHHHHHTTSSCSSC
T ss_pred ecCHH-HHHHHHHhhCCCccEEEEEECCCcCcchhhcC-cCCcCHHHHHHHHHHcCCCCCCc
Confidence 33221 11122110 0 00 00 112222221 01346899999999999865433
No 22
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=96.92 E-value=0.014 Score=61.68 Aligned_cols=159 Identities=14% Similarity=0.174 Sum_probs=90.5
Q ss_pred CCCCCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeC
Q 006671 411 NKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD 490 (636)
Q Consensus 411 g~~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~ 490 (636)
+.+|.|+||.|.|+|++|+.+|+.|...|++|++ .| +...+.+.. .+. ++++.+
T Consensus 159 ~~~l~gktvGIIG~G~IG~~vA~~l~~~G~~V~~-~d-------r~~~~~~~~---~~~---------------g~~~~~ 212 (351)
T 3jtm_A 159 AYDLEGKTIGTVGAGRIGKLLLQRLKPFGCNLLY-HD-------RLQMAPELE---KET---------------GAKFVE 212 (351)
T ss_dssp CCCSTTCEEEEECCSHHHHHHHHHHGGGCCEEEE-EC-------SSCCCHHHH---HHH---------------CCEECS
T ss_pred cccccCCEEeEEEeCHHHHHHHHHHHHCCCEEEE-eC-------CCccCHHHH---HhC---------------CCeEcC
Confidence 5689999999999999999999999999999653 33 333333221 110 222221
Q ss_pred C-CCccccccceEecCCC-----cCccchhhHHHhhhcCceEEEeCCCCC-CCHHH-HHHHHHCCce-Eecccccccccc
Q 006671 491 E-AKPWNERCDVAFPCAS-----QNEIDQSDAINLVNSGCRILVEGSNMP-CTPEA-VDVLKKANVL-IAPAMAAGAGGV 561 (636)
Q Consensus 491 ~-~eil~~~cDIliPcA~-----~n~It~enA~~l~~~~akiVvEgAN~P-~T~eA-~~iL~~rGIl-viPD~~aNAGGV 561 (636)
. ++++ ..|||++-|.. .+.|+.+....+ +.+ .+|+--|.++ +..+| .+.|++.+|. .+=|...+=--.
T Consensus 213 ~l~ell-~~aDvV~l~~Plt~~t~~li~~~~l~~m-k~g-ailIN~aRG~~vde~aL~~aL~~g~i~ga~lDV~~~EP~~ 289 (351)
T 3jtm_A 213 DLNEML-PKCDVIVINMPLTEKTRGMFNKELIGKL-KKG-VLIVNNARGAIMERQAVVDAVESGHIGGYSGDVWDPQPAP 289 (351)
T ss_dssp CHHHHG-GGCSEEEECSCCCTTTTTCBSHHHHHHS-CTT-EEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCSSSSCC
T ss_pred CHHHHH-hcCCEEEECCCCCHHHHHhhcHHHHhcC-CCC-CEEEECcCchhhCHHHHHHHHHhCCccEEEeCCCCCCCCC
Confidence 1 2222 37999987765 356766666555 223 4666777777 44444 5788887776 344443322111
Q ss_pred eeecch---hccccCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 006671 562 VAGELE---LNQECNMVHWSPEDFESKLQEAMKQTYQRAL 598 (636)
Q Consensus 562 ivS~~E---~~qN~~~~~ws~eeV~~rL~~~m~~~~~~v~ 598 (636)
.-+-+- -+-=..|+.|.-.+...++.+.+.+.+.+.+
T Consensus 290 ~~~pL~~~~nvilTPHia~~t~ea~~~~~~~~~~nl~~~~ 329 (351)
T 3jtm_A 290 KDHPWRYMPNQAMTPHTSGTTIDAQLRYAAGTKDMLERYF 329 (351)
T ss_dssp TTCGGGTSTTBCCCCSCGGGSHHHHHHHHHHHHHHHHHHH
T ss_pred CCChhhcCCCEEECCcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 111110 0111345556555566666555555554444
No 23
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=96.84 E-value=0.0055 Score=62.54 Aligned_cols=117 Identities=12% Similarity=0.193 Sum_probs=72.3
Q ss_pred HHhCCCCCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCce
Q 006671 408 ADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSK 487 (636)
Q Consensus 408 ~~~g~~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~ 487 (636)
+..+.++.|++|.|.|+|++|+.+|+.|...|++|+ +.|.+ .+++..+. + . +.+
T Consensus 149 ~~~~~~l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~-~~d~~----------~~~~~~~~---~-~-----------g~~ 202 (300)
T 2rir_A 149 QHTDYTIHGSQVAVLGLGRTGMTIARTFAALGANVK-VGARS----------SAHLARIT---E-M-----------GLV 202 (300)
T ss_dssp HTCSSCSTTSEEEEECCSHHHHHHHHHHHHTTCEEE-EEESS----------HHHHHHHH---H-T-----------TCE
T ss_pred HhcCCCCCCCEEEEEcccHHHHHHHHHHHHCCCEEE-EEECC----------HHHHHHHH---H-C-----------CCe
Confidence 445788999999999999999999999999999854 45541 22221111 1 1 111
Q ss_pred ee---CCCCccccccceEecCCCcCccchhhHHHhhhcCceEEEeCCCCCCCHHHHHHHHHCCceEe--ccc
Q 006671 488 YY---DEAKPWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANVLIA--PAM 554 (636)
Q Consensus 488 ~i---~~~eil~~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~~iL~~rGIlvi--PD~ 554 (636)
.+ +-++++ ..|||++-|...+.++.+....+ +.++ +|+.-|-+|..-+. +...++|+.++ |+.
T Consensus 203 ~~~~~~l~~~l-~~aDvVi~~~p~~~i~~~~~~~m-k~g~-~lin~a~g~~~~~~-~~a~~~G~~~i~~pg~ 270 (300)
T 2rir_A 203 PFHTDELKEHV-KDIDICINTIPSMILNQTVLSSM-TPKT-LILDLASRPGGTDF-KYAEKQGIKALLAPGL 270 (300)
T ss_dssp EEEGGGHHHHS-TTCSEEEECCSSCCBCHHHHTTS-CTTC-EEEECSSTTCSBCH-HHHHHHTCEEEECCCH
T ss_pred EEchhhHHHHh-hCCCEEEECCChhhhCHHHHHhC-CCCC-EEEEEeCCCCCcCH-HHHHHCCCEEEECCCC
Confidence 11 111122 37999999998888887644433 3344 44555555532222 45567788765 554
No 24
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=96.81 E-value=0.01 Score=61.78 Aligned_cols=53 Identities=26% Similarity=0.374 Sum_probs=45.5
Q ss_pred CCCcchhHHHHHHHHHHHHhCCCCCCcEEEEecCcc-HHHHHHHHHHHCCCEEEEEeCC
Q 006671 391 RTEATGYGLVFFAQLILADMNKELKGLRCVVSGSGK-IAMHVLEKLIAYGAIPVSVSDA 448 (636)
Q Consensus 391 r~eATG~GV~~~~~~~l~~~g~~l~GkrVaIqGfGN-VG~~aAe~L~e~GAkVVaVSDs 448 (636)
-...|.+|++. +|++.+.+++|++|+|.|.|+ ||..+|..|...|+. |+|+++
T Consensus 144 ~~PcTp~gv~~----lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAt-Vtv~~~ 197 (300)
T 4a26_A 144 FTPCTAKGVIV----LLKRCGIEMAGKRAVVLGRSNIVGAPVAALLMKENAT-VTIVHS 197 (300)
T ss_dssp CCCHHHHHHHH----HHHHHTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCE-EEEECT
T ss_pred CCCCCHHHHHH----HHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCCe-EEEEeC
Confidence 34689999764 556678999999999999887 899999999999998 688886
No 25
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=96.81 E-value=0.011 Score=61.13 Aligned_cols=52 Identities=25% Similarity=0.383 Sum_probs=45.3
Q ss_pred CCcchhHHHHHHHHHHHHhCCCCCCcEEEEecCcc-HHHHHHHHHHHCCCEEEEEeCC
Q 006671 392 TEATGYGLVFFAQLILADMNKELKGLRCVVSGSGK-IAMHVLEKLIAYGAIPVSVSDA 448 (636)
Q Consensus 392 ~eATG~GV~~~~~~~l~~~g~~l~GkrVaIqGfGN-VG~~aAe~L~e~GAkVVaVSDs 448 (636)
...|.+|++ ++|++.+.+++|++|+|.|.|+ ||..+|..|...||+ |+|+++
T Consensus 140 ~PcTp~gv~----~lL~~~~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAt-Vtv~h~ 192 (285)
T 3p2o_A 140 LPCTPLGVM----KLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNAGAT-VSVCHI 192 (285)
T ss_dssp CCHHHHHHH----HHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCE-EEEECT
T ss_pred CCCCHHHHH----HHHHHhCCCCCCCEEEEECCCchHHHHHHHHHHHCCCe-EEEEeC
Confidence 468999985 5566678999999999999887 899999999999999 788886
No 26
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=96.80 E-value=0.0037 Score=67.42 Aligned_cols=152 Identities=15% Similarity=0.183 Sum_probs=97.4
Q ss_pred cccCCCCCCChhHHHHHHHHhhhhhCCCCccccCcccccCCCCCCCCcchhHHHH--HHHHHHHHhCCCCCCcEEEEecC
Q 006671 347 DLPSEEMGVGTREMGYLFGQYRRLAGHFQGSFTGPRIFWSGSSLRTEATGYGLVF--FAQLILADMNKELKGLRCVVSGS 424 (636)
Q Consensus 347 DVpA~DiGt~~rem~~m~~~y~~l~g~~~g~vTGKp~~~GGs~~r~eATG~GV~~--~~~~~l~~~g~~l~GkrVaIqGf 424 (636)
.|-=.|++. .+.-.+.++|+..... |+- .++.-|.+++. ++-.+++-.|.+++..||+|.|.
T Consensus 133 ~I~lED~~~--p~~f~il~~~r~~~~i--------pvf------~DDiqGTa~V~lAall~al~l~g~~l~d~kVVi~GA 196 (398)
T 2a9f_A 133 GINLEDISA--PRCFEIEQRLIKECHI--------PVF------HDDQHGTAIVVLAAIFNSLKLLKKSLDEVSIVVNGG 196 (398)
T ss_dssp EEEECSCCT--THHHHHHHHHHHHCSS--------CEE------EHHHHHHHHHHHHHHHHHHHTTTCCTTSCEEEEECC
T ss_pred EeccccCCC--hHHHHHHHHhhhcCCc--------cee------cchhhhHHHHHHHHHHHHHHHhCCCCCccEEEEECC
Confidence 355678753 3444556677653111 111 12344444443 44555565678999999999999
Q ss_pred ccHHHHHHHHHHHCCCEEEEEeCCCCceeCCC--CCCHHHHHHHHHHHhhcCCccccccccCCceeeCCCCccc--cccc
Q 006671 425 GKIAMHVLEKLIAYGAIPVSVSDAKGYLVDED--GFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKPWN--ERCD 500 (636)
Q Consensus 425 GNVG~~aAe~L~e~GAkVVaVSDs~G~Iydpd--GLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~~~eil~--~~cD 500 (636)
|.+|.++|+.|...|++=|.+.|++|.|+... .|+..+.. ...+. . .+ . ....+.+ ..+|
T Consensus 197 GaAG~~iA~ll~~~Ga~~I~v~D~~Gli~~~R~~~L~~~k~~--fa~~~--~---~~------~---~~~~L~eav~~AD 260 (398)
T 2a9f_A 197 GSAGLSITRKLLAAGATKVTVVDKFGIINEQEAAQLAPHHLD--IAKVT--N---RE------F---KSGTLEDALEGAD 260 (398)
T ss_dssp SHHHHHHHHHHHHHTCCEEEEEETTEECCTTCCCSCCC---C--HHHHH--S---CT------T---CCCSCSHHHHTTC
T ss_pred CHHHHHHHHHHHHcCCCeEEEEECCCcccCCccccchHHHHH--Hhhcc--C---cc------c---chhhHHHHhccCC
Confidence 99999999999999996689999999998754 35432211 10000 0 00 0 0111221 2579
Q ss_pred eEecCCCcCccchhhHHHhhhcCceEEEeCCC
Q 006671 501 VAFPCASQNEIDQSDAINLVNSGCRILVEGSN 532 (636)
Q Consensus 501 IliPcA~~n~It~enA~~l~~~~akiVvEgAN 532 (636)
|||=++..+.+|++-.+++. .=.||.--||
T Consensus 261 V~IG~Sapgl~T~EmVk~Ma--~~pIIfalsN 290 (398)
T 2a9f_A 261 IFIGVSAPGVLKAEWISKMA--ARPVIFAMAN 290 (398)
T ss_dssp SEEECCSTTCCCHHHHHTSC--SSCEEEECCS
T ss_pred EEEecCCCCCCCHHHHHhhC--CCCEEEECCC
Confidence 99999999999999998883 4567777888
No 27
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=96.77 E-value=0.0064 Score=66.29 Aligned_cols=111 Identities=16% Similarity=0.190 Sum_probs=69.0
Q ss_pred hhHHHHHHHHHH-HHhCCCCCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcC
Q 006671 396 GYGLVFFAQLIL-ADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQR 474 (636)
Q Consensus 396 G~GV~~~~~~~l-~~~g~~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g 474 (636)
-||+...+-..+ +..+..+.|++|.|.|+|++|+.+|+.|...|++| .+.|.+ .... +.. .. .
T Consensus 199 ~yGt~~s~~~gi~rat~~~L~GktV~ViG~G~IGk~vA~~Lra~Ga~V-iv~D~d----------p~ra--~~A-~~-~- 262 (435)
T 3gvp_A 199 LYCCRESILDGLKRTTDMMFGGKQVVVCGYGEVGKGCCAALKAMGSIV-YVTEID----------PICA--LQA-CM-D- 262 (435)
T ss_dssp HHHHHHHHHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEE-EEECSC----------HHHH--HHH-HH-T-
T ss_pred hhhhHHHHHHHHHHhhCceecCCEEEEEeeCHHHHHHHHHHHHCCCEE-EEEeCC----------hhhh--HHH-HH-c-
Confidence 355544443333 33578899999999999999999999999999995 556651 1111 111 11 0
Q ss_pred CccccccccCCceeeCCCCccccccceEecCCC-cCccchhhHHHhhhcCceEEEeCCCCCC
Q 006671 475 SLRDYSKTYARSKYYDEAKPWNERCDVAFPCAS-QNEIDQSDAINLVNSGCRILVEGSNMPC 535 (636)
Q Consensus 475 ~l~~y~~~~p~a~~i~~~eil~~~cDIliPcA~-~n~It~enA~~l~~~~akiVvEgAN~P~ 535 (636)
+.+..+-++++ ..+||++-|.- .+.|+.+....+ +.++ +|+--++++.
T Consensus 263 ----------G~~v~~Leeal-~~ADIVi~atgt~~lI~~e~l~~M-K~ga-ilINvgrg~~ 311 (435)
T 3gvp_A 263 ----------GFRLVKLNEVI-RQVDIVITCTGNKNVVTREHLDRM-KNSC-IVCNMGHSNT 311 (435)
T ss_dssp ----------TCEECCHHHHT-TTCSEEEECSSCSCSBCHHHHHHS-CTTE-EEEECSSTTT
T ss_pred ----------CCEeccHHHHH-hcCCEEEECCCCcccCCHHHHHhc-CCCc-EEEEecCCCc
Confidence 11122112222 27899999853 578888877766 3354 5556666653
No 28
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=96.77 E-value=0.012 Score=59.43 Aligned_cols=143 Identities=13% Similarity=0.056 Sum_probs=87.2
Q ss_pred cchhHHHHHHHHHHHHhCCCCCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhc
Q 006671 394 ATGYGLVFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQ 473 (636)
Q Consensus 394 ATG~GV~~~~~~~l~~~g~~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~ 473 (636)
-++.|+..+++ ..+.+++|++|.|.|.|++|+.++..|.+.|++ |.|.|. +.+++. ++.+.
T Consensus 111 Td~~G~~~~l~----~~~~~~~~~~v~iiGaG~~g~aia~~L~~~g~~-V~v~~r----------~~~~~~---~l~~~- 171 (275)
T 2hk9_A 111 TDWIGFLKSLK----SLIPEVKEKSILVLGAGGASRAVIYALVKEGAK-VFLWNR----------TKEKAI---KLAQK- 171 (275)
T ss_dssp CHHHHHHHHHH----HHCTTGGGSEEEEECCSHHHHHHHHHHHHHTCE-EEEECS----------SHHHHH---HHTTT-
T ss_pred CCHHHHHHHHH----HhCCCcCCCEEEEECchHHHHHHHHHHHHcCCE-EEEEEC----------CHHHHH---HHHHH-
Confidence 45777766664 457789999999999999999999999999995 677776 223322 11111
Q ss_pred CCccccccccCCceeeCC-CCccccccceEecCCCcCccch--hh--HHHhhhcCceEEEeCCCCCCCHHHHHHHHHCCc
Q 006671 474 RSLRDYSKTYARSKYYDE-AKPWNERCDVAFPCASQNEIDQ--SD--AINLVNSGCRILVEGSNMPCTPEAVDVLKKANV 548 (636)
Q Consensus 474 g~l~~y~~~~p~a~~i~~-~eil~~~cDIliPcA~~n~It~--en--A~~l~~~~akiVvEgAN~P~T~eA~~iL~~rGI 548 (636)
+ +.+..+. .+.+ .++||+|-|........ .. ...+ + .-.+|+.-+. ..|+ -.+..+++|+
T Consensus 172 ---------~-g~~~~~~~~~~~-~~aDiVi~atp~~~~~~~~~~i~~~~l-~-~g~~viDv~~-~~t~-ll~~a~~~g~ 236 (275)
T 2hk9_A 172 ---------F-PLEVVNSPEEVI-DKVQVIVNTTSVGLKDEDPEIFNYDLI-K-KDHVVVDIIY-KETK-LLKKAKEKGA 236 (275)
T ss_dssp ---------S-CEEECSCGGGTG-GGCSEEEECSSTTSSTTCCCSSCGGGC-C-TTSEEEESSS-SCCH-HHHHHHHTTC
T ss_pred ---------c-CCeeehhHHhhh-cCCCEEEEeCCCCCCCCCCCCCCHHHc-C-CCCEEEEcCC-ChHH-HHHHHHHCcC
Confidence 1 1222211 1222 37999998887554211 11 1122 2 2346777777 5454 3455678999
Q ss_pred eEecccccccccceeecchhcc
Q 006671 549 LIAPAMAAGAGGVVAGELELNQ 570 (636)
Q Consensus 549 lviPD~~aNAGGVivS~~E~~q 570 (636)
.++|..-.-.+.-+.++..|..
T Consensus 237 ~~v~g~~mlv~q~~~a~~~w~g 258 (275)
T 2hk9_A 237 KLLDGLPMLLWQGIEAFKIWNG 258 (275)
T ss_dssp EEECSHHHHHHHHHHHHHHHHC
T ss_pred EEECCHHHHHHHHHHHHHHHHC
Confidence 9998765555555555555543
No 29
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=96.73 E-value=0.0016 Score=68.15 Aligned_cols=178 Identities=15% Similarity=0.129 Sum_probs=100.6
Q ss_pred cEEEEecCccHHHHHHHHHHHC--------CCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCcee
Q 006671 417 LRCVVSGSGKIAMHVLEKLIAY--------GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKY 488 (636)
Q Consensus 417 krVaIqGfGNVG~~aAe~L~e~--------GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~ 488 (636)
.+|.|.|+|+||+..++.|.+. +.+|++|+|++.....+. +|.+.+. +.+.. +.+..+ + +. .
T Consensus 7 irvgIiG~G~VG~~~~~~l~~~~~~~~~g~~~~vvaV~d~~~~~~~~~-~~~~~~~---~~~~~-~~~~~~---~-~~-~ 76 (331)
T 3c8m_A 7 INLSIFGLGNVGLNLLRIIRSFNEENRLGLKFNVVFVADSLHSYYNER-IDIGKVI---SYKEK-GSLDSL---E-YE-S 76 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCSSSEEEEEEEEECSSCEEECTT-CCHHHHH---HHHHT-TCGGGC---C-SE-E
T ss_pred EeEEEEecCHHHHHHHHHHHhChHHHhcCCcEEEEEEEECChHHhhcc-cChHHHh---hhhcc-CCcccc---c-CC-C
Confidence 5899999999999999998764 479999999977666654 6654431 11111 122111 0 00 0
Q ss_pred eCCCCccccccceEecCCCcC---ccchhhHHHhhhcCceEEEeCCCC-CCCHHHHH---HHHHCCceEecccccccccc
Q 006671 489 YDEAKPWNERCDVAFPCASQN---EIDQSDAINLVNSGCRILVEGSNM-PCTPEAVD---VLKKANVLIAPAMAAGAGGV 561 (636)
Q Consensus 489 i~~~eil~~~cDIliPcA~~n---~It~enA~~l~~~~akiVvEgAN~-P~T~eA~~---iL~~rGIlviPD~~aNAGGV 561 (636)
.+.+++++.++||++-|...+ ..+.+.+...++.|..+|++ |= |+..++.+ .-+++|+.+. +-++.||-
T Consensus 77 ~d~~~ll~~~iDvVv~~t~~~~~~~~~~~~~~~AL~aGkhVvta--nK~pla~~~~eL~~~A~~~gv~~~--~ea~vg~g 152 (331)
T 3c8m_A 77 ISASEALARDFDIVVDATPASADGKKELAFYKETFENGKDVVTA--NKSGLANFWPEIMEYARSNNRRIR--YEATVAGG 152 (331)
T ss_dssp CCHHHHHHSSCSEEEECSCCCSSSHHHHHHHHHHHHTTCEEEEC--CCHHHHHHHHHHHHHHHHHTCCEE--CGGGSSTT
T ss_pred CCHHHHhCCCCCEEEECCCCCCccchHHHHHHHHHHCCCeEEec--CchhhHHHHHHHHHHHHHcCCEEE--EEeecccc
Confidence 122334456899999999875 34455666667889999973 42 34444443 3457887765 23333332
Q ss_pred ---eeecchhccccCCCC-----CC--HHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCC
Q 006671 562 ---VAGELELNQECNMVH-----WS--PEDFESKLQEAMKQTYQRALKAATDFGYQKESP 611 (636)
Q Consensus 562 ---ivS~~E~~qN~~~~~-----ws--~eeV~~rL~~~m~~~~~~v~~~A~~~~~~~~~~ 611 (636)
+...-+++.. ..+. ++ -.-+..+++ -...|.+++..|++.|..+..|
T Consensus 153 iPii~~l~~~l~g-~~I~~I~GI~nGT~nyil~~m~--~g~~f~~~l~eAq~~GyaE~dP 209 (331)
T 3c8m_A 153 VPLFSFIDYSVLP-SRIKKFRGIVSLTINYFIRELA--NKREFDDVLSEATKLGIVEKNY 209 (331)
T ss_dssp SCCHHHHHHHSTT-CCCCEEEEECCHHHHHHHHHHH--TTCCHHHHHHHHHHHTSSCSSC
T ss_pred cHHHHHHHHHhhc-CcccEEEEEEeccceeEecchh--cCCCHHHHHHHHHHcCCCCCCc
Confidence 1111222210 0110 11 112223331 1236788999999998754443
No 30
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=96.71 E-value=0.0098 Score=63.10 Aligned_cols=110 Identities=16% Similarity=0.247 Sum_probs=68.3
Q ss_pred CCCCCCcEEEEecCccHHHHHHHHHHHCCCE-EEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceee
Q 006671 411 NKELKGLRCVVSGSGKIAMHVLEKLIAYGAI-PVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYY 489 (636)
Q Consensus 411 g~~l~GkrVaIqGfGNVG~~aAe~L~e~GAk-VVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i 489 (636)
+.++.|+||.|+|+|++|+.+|+.|...|++ |++ .|. .....+.. . .. ++...
T Consensus 159 ~~~l~g~tvgIIG~G~IG~~vA~~l~~~G~~~V~~-~d~-------~~~~~~~~---~----~~-----------g~~~~ 212 (364)
T 2j6i_A 159 AYDIEGKTIATIGAGRIGYRVLERLVPFNPKELLY-YDY-------QALPKDAE---E----KV-----------GARRV 212 (364)
T ss_dssp CCCSTTCEEEEECCSHHHHHHHHHHGGGCCSEEEE-ECS-------SCCCHHHH---H----HT-----------TEEEC
T ss_pred cccCCCCEEEEECcCHHHHHHHHHHHhCCCcEEEE-ECC-------CccchhHH---H----hc-----------CcEec
Confidence 5689999999999999999999999999997 754 333 22222211 0 00 22222
Q ss_pred C-CCCccccccceEecCCCc-----CccchhhHHHhhhcCceEEEeCCCCC-CCHHH-HHHHHHCCce
Q 006671 490 D-EAKPWNERCDVAFPCASQ-----NEIDQSDAINLVNSGCRILVEGSNMP-CTPEA-VDVLKKANVL 549 (636)
Q Consensus 490 ~-~~eil~~~cDIliPcA~~-----n~It~enA~~l~~~~akiVvEgAN~P-~T~eA-~~iL~~rGIl 549 (636)
+ .++++ ..|||++.|... +.|+++....+ +.++ +|+.-|.++ +..+| .+.|++.+|.
T Consensus 213 ~~l~ell-~~aDvV~l~~P~t~~t~~li~~~~l~~m-k~ga-~lIn~arG~~vd~~aL~~aL~~g~i~ 277 (364)
T 2j6i_A 213 ENIEELV-AQADIVTVNAPLHAGTKGLINKELLSKF-KKGA-WLVNTARGAICVAEDVAAALESGQLR 277 (364)
T ss_dssp SSHHHHH-HTCSEEEECCCCSTTTTTCBCHHHHTTS-CTTE-EEEECSCGGGBCHHHHHHHHHHTSEE
T ss_pred CCHHHHH-hcCCEEEECCCCChHHHHHhCHHHHhhC-CCCC-EEEECCCCchhCHHHHHHHHHcCCCc
Confidence 1 12222 379999988765 45655444443 3344 455566665 55554 5788888776
No 31
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=96.71 E-value=0.023 Score=59.68 Aligned_cols=118 Identities=18% Similarity=0.190 Sum_probs=70.2
Q ss_pred hCCCCCCcEEEEecCccHHHHHHHHHH-HCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCcee
Q 006671 410 MNKELKGLRCVVSGSGKIAMHVLEKLI-AYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKY 488 (636)
Q Consensus 410 ~g~~l~GkrVaIqGfGNVG~~aAe~L~-e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~ 488 (636)
.+.++.|++|.|+|+|++|+.+|+.|. ..|.+|+ +.|. +.-..+.. .+ + +.++
T Consensus 157 ~~~~l~g~~vgIIG~G~IG~~vA~~l~~~~G~~V~-~~d~-------~~~~~~~~---~~----------~-----g~~~ 210 (348)
T 2w2k_A 157 SAHNPRGHVLGAVGLGAIQKEIARKAVHGLGMKLV-YYDV-------APADAETE---KA----------L-----GAER 210 (348)
T ss_dssp TCCCSTTCEEEEECCSHHHHHHHHHHHHTTCCEEE-EECS-------SCCCHHHH---HH----------H-----TCEE
T ss_pred cCcCCCCCEEEEEEECHHHHHHHHHHHHhcCCEEE-EECC-------CCcchhhH---hh----------c-----CcEE
Confidence 467899999999999999999999999 9999965 4444 22122211 10 0 1222
Q ss_pred eCC-CCccccccceEecCCCc-----CccchhhHHHhhhcCceEEEeCCCCC-CCHHH-HHHHHHCCce-Eeccccc
Q 006671 489 YDE-AKPWNERCDVAFPCASQ-----NEIDQSDAINLVNSGCRILVEGSNMP-CTPEA-VDVLKKANVL-IAPAMAA 556 (636)
Q Consensus 489 i~~-~eil~~~cDIliPcA~~-----n~It~enA~~l~~~~akiVvEgAN~P-~T~eA-~~iL~~rGIl-viPD~~a 556 (636)
.+. ++++ .+|||++.|... +.|+.+....+ +.++ +|+--+.++ ++.++ .+.|.+..|. ..-|+..
T Consensus 211 ~~~l~ell-~~aDvVil~vp~~~~t~~li~~~~l~~m-k~ga-ilin~srg~~vd~~aL~~aL~~~~i~gaglDv~~ 284 (348)
T 2w2k_A 211 VDSLEELA-RRSDCVSVSVPYMKLTHHLIDEAFFAAM-KPGS-RIVNTARGPVISQDALIAALKSGKLLSAGLDVHE 284 (348)
T ss_dssp CSSHHHHH-HHCSEEEECCCCSGGGTTCBCHHHHHHS-CTTE-EEEECSCGGGBCHHHHHHHHHTTSEEEEEESSCT
T ss_pred eCCHHHHh-ccCCEEEEeCCCChHHHHHhhHHHHhcC-CCCC-EEEECCCCchhCHHHHHHHHHhCCceEEEeccCC
Confidence 211 1222 379999988754 45555444444 3344 445566655 45444 5667765554 3444443
No 32
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=96.70 E-value=0.025 Score=56.97 Aligned_cols=132 Identities=15% Similarity=0.119 Sum_probs=77.8
Q ss_pred chhHHHHHHHHHHHHhCCCCCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcC
Q 006671 395 TGYGLVFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQR 474 (636)
Q Consensus 395 TG~GV~~~~~~~l~~~g~~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g 474 (636)
.+.|++..++ ..+.+++|++++|.|.|.+|+.+++.|.+.|++ |.|.|. +.+++..+.+.....+
T Consensus 102 D~~G~~~~L~----~~~~~l~~k~vlViGaGg~g~a~a~~L~~~G~~-V~v~~R----------~~~~~~~la~~~~~~~ 166 (271)
T 1nyt_A 102 DGVGLLSDLE----RLSFIRPGLRILLIGAGGASRGVLLPLLSLDCA-VTITNR----------TVSRAEELAKLFAHTG 166 (271)
T ss_dssp HHHHHHHHHH----HHTCCCTTCEEEEECCSHHHHHHHHHHHHTTCE-EEEECS----------SHHHHHHHHHHTGGGS
T ss_pred CHHHHHHHHH----hcCcCcCCCEEEEECCcHHHHHHHHHHHHcCCE-EEEEEC----------CHHHHHHHHHHhhccC
Confidence 4777776664 357789999999999999999999999999987 566665 2334332322111101
Q ss_pred CccccccccCCceeeCCCCccccccceEecCCCcCccch-hhH-HHhhhcCceEEEeCCCCC-CCHHHHHHHHHCCce-E
Q 006671 475 SLRDYSKTYARSKYYDEAKPWNERCDVAFPCASQNEIDQ-SDA-INLVNSGCRILVEGSNMP-CTPEAVDVLKKANVL-I 550 (636)
Q Consensus 475 ~l~~y~~~~p~a~~i~~~eil~~~cDIliPcA~~n~It~-enA-~~l~~~~akiVvEgAN~P-~T~eA~~iL~~rGIl-v 550 (636)
. ....+.+++-+..+||+|-|+.-..-.. ... ..++. ...+|++-.-.| .|+ -.+..+++|+. +
T Consensus 167 ~----------~~~~~~~~~~~~~~DivVn~t~~~~~~~~~~i~~~~l~-~~~~v~D~~y~p~~t~-~~~~a~~~G~~~~ 234 (271)
T 1nyt_A 167 S----------IQALSMDELEGHEFDLIINATSSGISGDIPAIPSSLIH-PGIYCYDMFYQKGKTP-FLAWCEQRGSKRN 234 (271)
T ss_dssp S----------EEECCSGGGTTCCCSEEEECCSCGGGTCCCCCCGGGCC-TTCEEEESCCCSSCCH-HHHHHHHTTCCEE
T ss_pred C----------eeEecHHHhccCCCCEEEECCCCCCCCCCCCCCHHHcC-CCCEEEEeccCCcCCH-HHHHHHHcCCCee
Confidence 1 1111111111147999999886443210 000 11111 345778877777 455 34567888986 5
Q ss_pred ecc
Q 006671 551 APA 553 (636)
Q Consensus 551 iPD 553 (636)
++.
T Consensus 235 ~~G 237 (271)
T 1nyt_A 235 ADG 237 (271)
T ss_dssp ECT
T ss_pred cCC
Confidence 533
No 33
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=96.70 E-value=0.02 Score=60.50 Aligned_cols=155 Identities=16% Similarity=0.181 Sum_probs=85.5
Q ss_pred CCCCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceee-C
Q 006671 412 KELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYY-D 490 (636)
Q Consensus 412 ~~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i-~ 490 (636)
.++.|+||.|+|+|++|+.+|+.|...|++|++ .|.+ ++ . ... .. + ++++. +
T Consensus 164 ~~l~g~tvGIIG~G~IG~~vA~~l~~~G~~V~~-~d~~-----~~--~--~~~--~~----------~-----g~~~~~~ 216 (347)
T 1mx3_A 164 ARIRGETLGIIGLGRVGQAVALRAKAFGFNVLF-YDPY-----LS--D--GVE--RA----------L-----GLQRVST 216 (347)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEE-ECTT-----SC--T--THH--HH----------H-----TCEECSS
T ss_pred cCCCCCEEEEEeECHHHHHHHHHHHHCCCEEEE-ECCC-----cc--h--hhH--hh----------c-----CCeecCC
Confidence 579999999999999999999999999999654 4431 11 1 000 00 0 12222 1
Q ss_pred CCCccccccceEecCCC-----cCccchhhHHHhhhcCceEEEeCCCCC-CCHHH-HHHHHHCCceEe-cccccccccce
Q 006671 491 EAKPWNERCDVAFPCAS-----QNEIDQSDAINLVNSGCRILVEGSNMP-CTPEA-VDVLKKANVLIA-PAMAAGAGGVV 562 (636)
Q Consensus 491 ~~eil~~~cDIliPcA~-----~n~It~enA~~l~~~~akiVvEgAN~P-~T~eA-~~iL~~rGIlvi-PD~~aNAGGVi 562 (636)
.++++ ..|||++-|.. .+.|+.+....+ +.++ +++.-|.++ ++.++ .+.|++.+|.-+ -|+..+-- +.
T Consensus 217 l~ell-~~aDvV~l~~P~t~~t~~li~~~~l~~m-k~ga-ilIN~arg~~vd~~aL~~aL~~g~i~gA~lDV~~~EP-~~ 292 (347)
T 1mx3_A 217 LQDLL-FHSDCVTLHCGLNEHNHHLINDFTVKQM-RQGA-FLVNTARGGLVDEKALAQALKEGRIRGAALDVHESEP-FS 292 (347)
T ss_dssp HHHHH-HHCSEEEECCCCCTTCTTSBSHHHHTTS-CTTE-EEEECSCTTSBCHHHHHHHHHHTSEEEEEESCCSSSS-CC
T ss_pred HHHHH-hcCCEEEEcCCCCHHHHHHhHHHHHhcC-CCCC-EEEECCCChHHhHHHHHHHHHhCCCcEEEEeecccCC-CC
Confidence 12233 37999987754 456665554444 3344 555666665 55554 578888887632 23222110 00
Q ss_pred --eecchhccc---cCCCCCCHHHHHHHHHHHHHHHHHHH
Q 006671 563 --AGELELNQE---CNMVHWSPEDFESKLQEAMKQTYQRA 597 (636)
Q Consensus 563 --vS~~E~~qN---~~~~~ws~eeV~~rL~~~m~~~~~~v 597 (636)
.+-+--..| ..|+.|.-++...++.+...+.+.+.
T Consensus 293 ~~~~~L~~~~nvi~tPHia~~t~~~~~~~~~~~~~ni~~~ 332 (347)
T 1mx3_A 293 FSQGPLKDAPNLICTPHAAWYSEQASIEMREEAAREIRRA 332 (347)
T ss_dssp TTSSTTTTCSSEEECSSCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCchHHhCCCEEEEchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000111122 34566766776666655444444443
No 34
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=96.69 E-value=0.0067 Score=66.16 Aligned_cols=103 Identities=12% Similarity=0.131 Sum_probs=65.8
Q ss_pred HHhCCCCCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCce
Q 006671 408 ADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSK 487 (636)
Q Consensus 408 ~~~g~~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~ 487 (636)
+..+..+.|++|.|.|+|+||+.+|+.|...|++| .+.|. + .... . .... . +.+
T Consensus 203 ratg~~L~GktVgIiG~G~IG~~vA~~Lka~Ga~V-iv~D~-------~---p~~a--~-~A~~-~-----------G~~ 256 (436)
T 3h9u_A 203 RATDVMIAGKTACVCGYGDVGKGCAAALRGFGARV-VVTEV-------D---PINA--L-QAAM-E-----------GYQ 256 (436)
T ss_dssp HHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEE-EEECS-------C---HHHH--H-HHHH-T-----------TCE
T ss_pred HhcCCcccCCEEEEEeeCHHHHHHHHHHHHCCCEE-EEECC-------C---hhhh--H-HHHH-h-----------CCe
Confidence 44688999999999999999999999999999995 45665 2 2111 0 0111 0 122
Q ss_pred eeCCCCccccccceEecCCC-cCccchhhHHHhhhcCceEEEeCCCCC--CCHHH
Q 006671 488 YYDEAKPWNERCDVAFPCAS-QNEIDQSDAINLVNSGCRILVEGSNMP--CTPEA 539 (636)
Q Consensus 488 ~i~~~eil~~~cDIliPcA~-~n~It~enA~~l~~~~akiVvEgAN~P--~T~eA 539 (636)
+.+-++++. .+||++-|.. .+.|+.+....+ +.++ +|+--|+++ +.+++
T Consensus 257 ~~sL~eal~-~ADVVilt~gt~~iI~~e~l~~M-K~gA-IVINvgRg~vEID~~~ 308 (436)
T 3h9u_A 257 VLLVEDVVE-EAHIFVTTTGNDDIITSEHFPRM-RDDA-IVCNIGHFDTEIQVAW 308 (436)
T ss_dssp ECCHHHHTT-TCSEEEECSSCSCSBCTTTGGGC-CTTE-EEEECSSSGGGBCHHH
T ss_pred ecCHHHHHh-hCCEEEECCCCcCccCHHHHhhc-CCCc-EEEEeCCCCCccCHHH
Confidence 222222332 6899997663 478888877666 3344 555666765 44443
No 35
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=96.60 E-value=0.018 Score=59.61 Aligned_cols=52 Identities=25% Similarity=0.369 Sum_probs=44.2
Q ss_pred CCcchhHHHHHHHHHHHHhCCCCCCcEEEEecCcc-HHHHHHHHHHHCCCEEEEEeCC
Q 006671 392 TEATGYGLVFFAQLILADMNKELKGLRCVVSGSGK-IAMHVLEKLIAYGAIPVSVSDA 448 (636)
Q Consensus 392 ~eATG~GV~~~~~~~l~~~g~~l~GkrVaIqGfGN-VG~~aAe~L~e~GAkVVaVSDs 448 (636)
...|.+|++ ++|++.+.++.|++|+|.|.|+ ||..+|.+|...|++ |+++++
T Consensus 139 ~PcTp~gi~----~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAt-Vtv~hs 191 (288)
T 1b0a_A 139 RPCTPRGIV----TLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCT-TTVTHR 191 (288)
T ss_dssp CCHHHHHHH----HHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTTTCE-EEEECS
T ss_pred CCCcHHHHH----HHHHHcCCCCCCCEEEEECCChHHHHHHHHHHHHCCCe-EEEEeC
Confidence 468888865 4555678899999999999997 799999999999999 677775
No 36
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=96.52 E-value=0.024 Score=60.38 Aligned_cols=157 Identities=9% Similarity=0.025 Sum_probs=85.1
Q ss_pred CCCCCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeC
Q 006671 411 NKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD 490 (636)
Q Consensus 411 g~~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~ 490 (636)
+.++.|+||.|.|+|++|+.+|+.|...|.+|++. |+.. ..+.. . . .++++.+
T Consensus 171 ~~~l~gktvGIIGlG~IG~~vA~~l~~fG~~V~~~--------d~~~-~~~~~---~---~------------~g~~~~~ 223 (365)
T 4hy3_A 171 ARLIAGSEIGIVGFGDLGKALRRVLSGFRARIRVF--------DPWL-PRSML---E---E------------NGVEPAS 223 (365)
T ss_dssp CCCSSSSEEEEECCSHHHHHHHHHHTTSCCEEEEE--------CSSS-CHHHH---H---H------------TTCEECC
T ss_pred ccccCCCEEEEecCCcccHHHHHhhhhCCCEEEEE--------CCCC-CHHHH---h---h------------cCeeeCC
Confidence 56899999999999999999999999999997643 3332 22211 0 0 0222222
Q ss_pred CCCccccccceEecCCC-----cCccchhhHHHhhhcCceEEEeCCCCC-CCHHH-HHHHHHCCceEeccccccccccee
Q 006671 491 EAKPWNERCDVAFPCAS-----QNEIDQSDAINLVNSGCRILVEGSNMP-CTPEA-VDVLKKANVLIAPAMAAGAGGVVA 563 (636)
Q Consensus 491 ~~eil~~~cDIliPcA~-----~n~It~enA~~l~~~~akiVvEgAN~P-~T~eA-~~iL~~rGIlviPD~~aNAGGViv 563 (636)
-++++ ..|||++-|.. .+.|+.+....+ +.++ +++--|-++ +..+| .+.|++..|..+=|...+=-=..-
T Consensus 224 l~ell-~~aDvV~l~~Plt~~T~~li~~~~l~~m-k~ga-ilIN~aRG~~vde~aL~~aL~~g~i~aaLDV~~~EPl~~~ 300 (365)
T 4hy3_A 224 LEDVL-TKSDFIFVVAAVTSENKRFLGAEAFSSM-RRGA-AFILLSRADVVDFDALMAAVSSGHIVAASDVYPEEPLPLD 300 (365)
T ss_dssp HHHHH-HSCSEEEECSCSSCC---CCCHHHHHTS-CTTC-EEEECSCGGGSCHHHHHHHHHTTSSEEEESCCSSSSCCTT
T ss_pred HHHHH-hcCCEEEEcCcCCHHHHhhcCHHHHhcC-CCCc-EEEECcCCchhCHHHHHHHHHcCCceEEeeCCCCCCCCCC
Confidence 12222 37899987654 346666655544 3345 445566655 45444 467777666544344332110000
Q ss_pred ecc---hhccccCCCCCCHHHHHHHHHHHHHHHHHHH
Q 006671 564 GEL---ELNQECNMVHWSPEDFESKLQEAMKQTYQRA 597 (636)
Q Consensus 564 S~~---E~~qN~~~~~ws~eeV~~rL~~~m~~~~~~v 597 (636)
+-+ .-+-=..|+.|.-.+..+++.+...+.+.+.
T Consensus 301 ~pL~~~~nvilTPHia~~t~e~~~~~~~~~~~ni~~~ 337 (365)
T 4hy3_A 301 HPVRSLKGFIRSAHRAGALDSAFKKMGDMVLEDMDLM 337 (365)
T ss_dssp CGGGTCTTEEECCSCSSCCHHHHHHHHHHHHHHHHHH
T ss_pred ChhhcCCCEEECCccccCHHHHHHHHHHHHHHHHHHH
Confidence 111 0011245666665666666644444444433
No 37
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=96.44 E-value=0.024 Score=59.33 Aligned_cols=110 Identities=14% Similarity=0.173 Sum_probs=68.7
Q ss_pred CCCCCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeC
Q 006671 411 NKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD 490 (636)
Q Consensus 411 g~~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~ 490 (636)
+.++.|+||.|.|+|++|+.+|+.|...|++|++. |. ...+.+.. .. + ++++.+
T Consensus 140 ~~~l~g~tvGIIG~G~IG~~vA~~l~~~G~~V~~~-d~-------~~~~~~~~---~~----------~-----g~~~~~ 193 (330)
T 4e5n_A 140 GTGLDNATVGFLGMGAIGLAMADRLQGWGATLQYH-EA-------KALDTQTE---QR----------L-----GLRQVA 193 (330)
T ss_dssp CCCSTTCEEEEECCSHHHHHHHHHTTTSCCEEEEE-CS-------SCCCHHHH---HH----------H-----TEEECC
T ss_pred CCccCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEE-CC-------CCCcHhHH---Hh----------c-----CceeCC
Confidence 45789999999999999999999999999996543 43 33222211 00 0 222222
Q ss_pred CCCccccccceEecCCC-----cCccchhhHHHhhhcCceEEEeCCCCC-CCHHH-HHHHHHCCce
Q 006671 491 EAKPWNERCDVAFPCAS-----QNEIDQSDAINLVNSGCRILVEGSNMP-CTPEA-VDVLKKANVL 549 (636)
Q Consensus 491 ~~eil~~~cDIliPcA~-----~n~It~enA~~l~~~~akiVvEgAN~P-~T~eA-~~iL~~rGIl 549 (636)
-++++ ..|||++-|.. .+.|+.+....+ +.+ .+|+-.|.++ +..+| .+.|++.+|.
T Consensus 194 l~ell-~~aDvV~l~~P~t~~t~~li~~~~l~~m-k~g-ailIN~arg~~vd~~aL~~aL~~g~i~ 256 (330)
T 4e5n_A 194 CSELF-ASSDFILLALPLNADTLHLVNAELLALV-RPG-ALLVNPCRGSVVDEAAVLAALERGQLG 256 (330)
T ss_dssp HHHHH-HHCSEEEECCCCSTTTTTCBCHHHHTTS-CTT-EEEEECSCGGGBCHHHHHHHHHHTSEE
T ss_pred HHHHH-hhCCEEEEcCCCCHHHHHHhCHHHHhhC-CCC-cEEEECCCCchhCHHHHHHHHHhCCcc
Confidence 22233 37899987765 456665554444 223 4666677766 44444 5778888775
No 38
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=96.44 E-value=0.024 Score=60.81 Aligned_cols=172 Identities=14% Similarity=0.130 Sum_probs=98.0
Q ss_pred cchhHHHHHHHHHHHHhCCCCCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhc
Q 006671 394 ATGYGLVFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQ 473 (636)
Q Consensus 394 ATG~GV~~~~~~~l~~~g~~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~ 473 (636)
+++--++..+-.+.+..+.++.|+||.|.|+|++|+.+|+.|...|.+|++. |. .. ...
T Consensus 97 ~VAE~~l~~lL~l~r~~g~~l~gktvGIIGlG~IG~~vA~~l~a~G~~V~~~-d~------------~~--------~~~ 155 (381)
T 3oet_A 97 AVVEYVFSALLMLAERDGFSLRDRTIGIVGVGNVGSRLQTRLEALGIRTLLC-DP------------PR--------AAR 155 (381)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGCEEEEECCSHHHHHHHHHHHHTTCEEEEE-CH------------HH--------HHT
T ss_pred hhHHHHHHHHHHHHHhcCCccCCCEEEEEeECHHHHHHHHHHHHCCCEEEEE-CC------------Ch--------HHh
Confidence 3444444445555566789999999999999999999999999999997654 32 00 000
Q ss_pred CCccccccccCCceeeCCCCccccccceEecCC---------CcCccchhhHHHhhhcCceEEEeCCCCC-CCHHH-HHH
Q 006671 474 RSLRDYSKTYARSKYYDEAKPWNERCDVAFPCA---------SQNEIDQSDAINLVNSGCRILVEGSNMP-CTPEA-VDV 542 (636)
Q Consensus 474 g~l~~y~~~~p~a~~i~~~eil~~~cDIliPcA---------~~n~It~enA~~l~~~~akiVvEgAN~P-~T~eA-~~i 542 (636)
. . +..+.+-++++ ..|||++-|. +.+.|+.+....+ +.+ .+++-.|-++ +..+| .+.
T Consensus 156 ~---~------~~~~~sl~ell-~~aDiV~l~~Plt~~g~~~T~~li~~~~l~~m-k~g-ailIN~aRG~vvde~aL~~a 223 (381)
T 3oet_A 156 G---D------EGDFRTLDELV-QEADVLTFHTPLYKDGPYKTLHLADETLIRRL-KPG-AILINACRGPVVDNAALLAR 223 (381)
T ss_dssp T---C------CSCBCCHHHHH-HHCSEEEECCCCCCSSTTCCTTSBCHHHHHHS-CTT-EEEEECSCGGGBCHHHHHHH
T ss_pred c---c------CcccCCHHHHH-hhCCEEEEcCcCCccccccchhhcCHHHHhcC-CCC-cEEEECCCCcccCHHHHHHH
Confidence 0 0 01111111222 3788887665 4556766655554 223 4566677766 44444 467
Q ss_pred HHHCCce-Eecccccccccceeecchh-ccccCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 006671 543 LKKANVL-IAPAMAAGAGGVVAGELEL-NQECNMVHWSPEDFESKLQEAMKQTYQRAL 598 (636)
Q Consensus 543 L~~rGIl-viPD~~aNAGGVivS~~E~-~qN~~~~~ws~eeV~~rL~~~m~~~~~~v~ 598 (636)
|++.+|. .+=|...+=--...+-+.. +--..|+.|.-.|...+....+.+.+.+.+
T Consensus 224 L~~g~i~gA~LDV~e~EP~~~~~L~~~~~i~TPHiag~t~e~~~~~~~~~~~~l~~~l 281 (381)
T 3oet_A 224 LNAGQPLSVVLDVWEGEPDLNVALLEAVDIGTSHIAGYTLEGKARGTTQVFEAYSAFI 281 (381)
T ss_dssp HHTTCCEEEEESCCTTTTSCCHHHHHHSSEECSSCTTCCHHHHHHHHHHHHHHHHHHT
T ss_pred HHhCCCeEEEeeccccCCCCcchhhhCCEEECCccCcCcHHHHHHHHHHHHHHHHHHH
Confidence 7777664 3445544433221111111 001457777666666666555555555444
No 39
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=96.40 E-value=0.05 Score=58.46 Aligned_cols=110 Identities=15% Similarity=0.262 Sum_probs=66.3
Q ss_pred CCCCCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeC
Q 006671 411 NKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD 490 (636)
Q Consensus 411 g~~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~ 490 (636)
+.+|.|+||.|.|+|++|+.+|+.|...|.+|++ .|. ..-..+.. .+ . ++++..
T Consensus 186 ~~~l~gktvGIIGlG~IG~~vA~~l~a~G~~V~~-~d~-------~~~~~~~~---~~----~-----------G~~~~~ 239 (393)
T 2nac_A 186 AYDLEAMHVGTVAAGRIGLAVLRRLAPFDVHLHY-TDR-------HRLPESVE---KE----L-----------NLTWHA 239 (393)
T ss_dssp CCCCTTCEEEEECCSHHHHHHHHHHGGGTCEEEE-ECS-------SCCCHHHH---HH----H-----------TCEECS
T ss_pred CccCCCCEEEEEeECHHHHHHHHHHHhCCCEEEE-EcC-------CccchhhH---hh----c-----------CceecC
Confidence 5689999999999999999999999999999754 343 22111110 00 0 122211
Q ss_pred -CCCccccccceEecCCC-----cCccchhhHHHhhhcCceEEEeCCCCC-CCHHH-HHHHHHCCce
Q 006671 491 -EAKPWNERCDVAFPCAS-----QNEIDQSDAINLVNSGCRILVEGSNMP-CTPEA-VDVLKKANVL 549 (636)
Q Consensus 491 -~~eil~~~cDIliPcA~-----~n~It~enA~~l~~~~akiVvEgAN~P-~T~eA-~~iL~~rGIl 549 (636)
-++++ ..|||++-|.. .+.|+.+....+ +.++ +|+.-|-++ +..+| .+.|++..|.
T Consensus 240 ~l~ell-~~aDvV~l~~Plt~~t~~li~~~~l~~m-k~ga-ilIN~aRG~~vde~aL~~aL~~g~i~ 303 (393)
T 2nac_A 240 TREDMY-PVCDVVTLNCPLHPETEHMINDETLKLF-KRGA-YIVNTARGKLCDRDAVARALESGRLA 303 (393)
T ss_dssp SHHHHG-GGCSEEEECSCCCTTTTTCBSHHHHTTS-CTTE-EEEECSCGGGBCHHHHHHHHHTTSEE
T ss_pred CHHHHH-hcCCEEEEecCCchHHHHHhhHHHHhhC-CCCC-EEEECCCchHhhHHHHHHHHHcCCee
Confidence 12223 37899987755 455665544444 3344 555566665 45444 5677766554
No 40
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=96.36 E-value=0.023 Score=59.67 Aligned_cols=108 Identities=18% Similarity=0.216 Sum_probs=67.8
Q ss_pred CCCCCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeC
Q 006671 411 NKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD 490 (636)
Q Consensus 411 g~~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~ 490 (636)
+.+|.|+||.|.|+|++|+.+|+.|...|++|++. |. ..- .. .. .. +.++.+
T Consensus 136 ~~~l~g~tvgIiG~G~IG~~vA~~l~~~G~~V~~~-d~-------~~~---~~--~~----~~-----------g~~~~~ 187 (334)
T 2pi1_A 136 ARELNRLTLGVIGTGRIGSRVAMYGLAFGMKVLCY-DV-------VKR---ED--LK----EK-----------GCVYTS 187 (334)
T ss_dssp BCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEE-CS-------SCC---HH--HH----HT-----------TCEECC
T ss_pred ceeccCceEEEECcCHHHHHHHHHHHHCcCEEEEE-CC-------Ccc---hh--hH----hc-----------CceecC
Confidence 45789999999999999999999999999997543 33 221 10 00 00 222222
Q ss_pred CCCccccccceEecCCC-----cCccchhhHHHhhhcCceEEEeCCCCC-CCHHH-HHHHHHCCce
Q 006671 491 EAKPWNERCDVAFPCAS-----QNEIDQSDAINLVNSGCRILVEGSNMP-CTPEA-VDVLKKANVL 549 (636)
Q Consensus 491 ~~eil~~~cDIliPcA~-----~n~It~enA~~l~~~~akiVvEgAN~P-~T~eA-~~iL~~rGIl 549 (636)
-++++ ..|||++-|.. .+.|+.+....+ +.++ +++--|-++ +..+| .+.|++..|.
T Consensus 188 l~ell-~~aDvV~l~~P~t~~t~~li~~~~l~~m-k~ga-ilIN~aRg~~vd~~aL~~aL~~g~i~ 250 (334)
T 2pi1_A 188 LDELL-KESDVISLHVPYTKETHHMINEERISLM-KDGV-YLINTARGKVVDTDALYRAYQRGKFS 250 (334)
T ss_dssp HHHHH-HHCSEEEECCCCCTTTTTCBCHHHHHHS-CTTE-EEEECSCGGGBCHHHHHHHHHTTCEE
T ss_pred HHHHH-hhCCEEEEeCCCChHHHHhhCHHHHhhC-CCCc-EEEECCCCcccCHHHHHHHHHhCCce
Confidence 22233 37899987754 456776666555 2234 556666666 44444 4677777665
No 41
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=96.35 E-value=0.023 Score=58.73 Aligned_cols=108 Identities=19% Similarity=0.211 Sum_probs=65.7
Q ss_pred CCCCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeCC
Q 006671 412 KELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE 491 (636)
Q Consensus 412 ~~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~~ 491 (636)
.++.|+||.|+|+|++|+.+|+.|...|++|+ +.|. .. +.+. .. .. ++++.+.
T Consensus 138 ~~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~-~~d~-------~~-~~~~---~~----~~-----------g~~~~~l 190 (307)
T 1wwk_A 138 IELEGKTIGIIGFGRIGYQVAKIANALGMNIL-LYDP-------YP-NEER---AK----EV-----------NGKFVDL 190 (307)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEE-EECS-------SC-CHHH---HH----HT-----------TCEECCH
T ss_pred cccCCceEEEEccCHHHHHHHHHHHHCCCEEE-EECC-------CC-Chhh---Hh----hc-----------CccccCH
Confidence 57999999999999999999999999999965 4443 11 1111 00 00 2222222
Q ss_pred CCccccccceEecCCC-----cCccchhhHHHhhhcCceEEEeCCCCC-CCHHH-HHHHHHCCce
Q 006671 492 AKPWNERCDVAFPCAS-----QNEIDQSDAINLVNSGCRILVEGSNMP-CTPEA-VDVLKKANVL 549 (636)
Q Consensus 492 ~eil~~~cDIliPcA~-----~n~It~enA~~l~~~~akiVvEgAN~P-~T~eA-~~iL~~rGIl 549 (636)
++++ ..|||++.|.. .+.|+.+....+ +.++-+| .-+-++ +..++ .+.|++..|.
T Consensus 191 ~ell-~~aDvV~l~~p~~~~t~~li~~~~l~~m-k~ga~li-n~arg~~vd~~aL~~aL~~g~i~ 252 (307)
T 1wwk_A 191 ETLL-KESDVVTIHVPLVESTYHLINEERLKLM-KKTAILI-NTSRGPVVDTNALVKALKEGWIA 252 (307)
T ss_dssp HHHH-HHCSEEEECCCCSTTTTTCBCHHHHHHS-CTTCEEE-ECSCGGGBCHHHHHHHHHHTSSS
T ss_pred HHHH-hhCCEEEEecCCChHHhhhcCHHHHhcC-CCCeEEE-ECCCCcccCHHHHHHHHHhCCCc
Confidence 2233 37999988765 345655554444 3455554 444454 55443 5777776654
No 42
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=96.35 E-value=0.054 Score=57.19 Aligned_cols=153 Identities=11% Similarity=0.126 Sum_probs=86.8
Q ss_pred CCCCCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeC
Q 006671 411 NKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD 490 (636)
Q Consensus 411 g~~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~ 490 (636)
+.++.|+||.|.|+|++|+.+|+.|...|.+|++. |+...+.+.. . ++++.+
T Consensus 168 g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~--------dr~~~~~~~~--------~------------g~~~~~ 219 (345)
T 4g2n_A 168 GMGLTGRRLGIFGMGRIGRAIATRARGFGLAIHYH--------NRTRLSHALE--------E------------GAIYHD 219 (345)
T ss_dssp BCCCTTCEEEEESCSHHHHHHHHHHHTTTCEEEEE--------CSSCCCHHHH--------T------------TCEECS
T ss_pred ccccCCCEEEEEEeChhHHHHHHHHHHCCCEEEEE--------CCCCcchhhh--------c------------CCeEeC
Confidence 56899999999999999999999999999997643 3333332210 0 122221
Q ss_pred -CCCccccccceEecCCC-----cCccchhhHHHhhhcCceEEEeCCCCC-CCHHH-HHHHHHCCce-Eecccccccccc
Q 006671 491 -EAKPWNERCDVAFPCAS-----QNEIDQSDAINLVNSGCRILVEGSNMP-CTPEA-VDVLKKANVL-IAPAMAAGAGGV 561 (636)
Q Consensus 491 -~~eil~~~cDIliPcA~-----~n~It~enA~~l~~~~akiVvEgAN~P-~T~eA-~~iL~~rGIl-viPD~~aNAGGV 561 (636)
-++++ ..|||++-|.. .+.|+.+....+ +. -.+++--|-++ +..+| .+.|++..|. .+=|...+=- -
T Consensus 220 ~l~ell-~~sDvV~l~~Plt~~T~~li~~~~l~~m-k~-gailIN~aRG~~vde~aL~~aL~~g~i~gA~LDVf~~EP-~ 295 (345)
T 4g2n_A 220 TLDSLL-GASDIFLIAAPGRPELKGFLDHDRIAKI-PE-GAVVINISRGDLINDDALIEALRSKHLFAAGLDVFANEP-A 295 (345)
T ss_dssp SHHHHH-HTCSEEEECSCCCGGGTTCBCHHHHHHS-CT-TEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCTTTT-S
T ss_pred CHHHHH-hhCCEEEEecCCCHHHHHHhCHHHHhhC-CC-CcEEEECCCCchhCHHHHHHHHHhCCceEEEecCCCCCC-C
Confidence 12222 37899887664 366766665555 22 34666777777 44444 4677777665 2344443332 1
Q ss_pred eeecchhccc---cCCCCCCHHHHHHHHHHHHHHHHH
Q 006671 562 VAGELELNQE---CNMVHWSPEDFESKLQEAMKQTYQ 595 (636)
Q Consensus 562 ivS~~E~~qN---~~~~~ws~eeV~~rL~~~m~~~~~ 595 (636)
.-+-+--..| ..|+.|.-.+..+++.+.+.+.+.
T Consensus 296 ~~~pL~~~~nvilTPHia~~t~e~~~~~~~~~~~ni~ 332 (345)
T 4g2n_A 296 IDPRYRSLDNIFLTPHIGSATHETRDAMGWLLIQGIE 332 (345)
T ss_dssp CCTTGGGCTTEEECCSCTTCBHHHHHHHHHHHHHHHH
T ss_pred CCchHHhCCCEEEcCccCcCCHHHHHHHHHHHHHHHH
Confidence 1111111111 345666555555555444433333
No 43
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=96.34 E-value=0.047 Score=56.99 Aligned_cols=107 Identities=19% Similarity=0.224 Sum_probs=65.4
Q ss_pred CCCCCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeC
Q 006671 411 NKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD 490 (636)
Q Consensus 411 g~~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~ 490 (636)
+.++.|+||.|.|+|++|+.+|+.|...|++|++ .|.+. +-. +..+ ..+.+
T Consensus 141 ~~~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~-~d~~~-----~~~-----------------~~~~------~~~~~ 191 (331)
T 1xdw_A 141 SKEVRNCTVGVVGLGRIGRVAAQIFHGMGATVIG-EDVFE-----IKG-----------------IEDY------CTQVS 191 (331)
T ss_dssp CCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEE-ECSSC-----CCS-----------------CTTT------CEECC
T ss_pred ccCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEE-ECCCc-----cHH-----------------HHhc------cccCC
Confidence 3578999999999999999999999999999654 44321 100 0000 11111
Q ss_pred CCCccccccceEecCCC-----cCccchhhHHHhhhcCceEEEeCCCCC-CCHHH-HHHHHHCCce
Q 006671 491 EAKPWNERCDVAFPCAS-----QNEIDQSDAINLVNSGCRILVEGSNMP-CTPEA-VDVLKKANVL 549 (636)
Q Consensus 491 ~~eil~~~cDIliPcA~-----~n~It~enA~~l~~~~akiVvEgAN~P-~T~eA-~~iL~~rGIl 549 (636)
-++++ ..|||++-|.. .+.|+.+....+ +.++ +++.-+-++ +..+| .+.|++.+|.
T Consensus 192 l~ell-~~aDvV~~~~p~t~~t~~li~~~~l~~m-k~ga-~lin~srg~~vd~~aL~~aL~~g~i~ 254 (331)
T 1xdw_A 192 LDEVL-EKSDIITIHAPYIKENGAVVTRDFLKKM-KDGA-ILVNCARGQLVDTEAVIEAVESGKLG 254 (331)
T ss_dssp HHHHH-HHCSEEEECCCCCTTTCCSBCHHHHHTS-CTTE-EEEECSCGGGBCHHHHHHHHHHTSEE
T ss_pred HHHHH-hhCCEEEEecCCchHHHHHhCHHHHhhC-CCCc-EEEECCCcccccHHHHHHHHHhCCce
Confidence 11222 37899988754 456665555544 3344 444555554 45444 5778887775
No 44
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=96.34 E-value=0.039 Score=57.76 Aligned_cols=158 Identities=13% Similarity=0.159 Sum_probs=85.5
Q ss_pred CCCCCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeC
Q 006671 411 NKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD 490 (636)
Q Consensus 411 g~~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~ 490 (636)
+.++.|+||.|.|+|++|+.+|+.|...|.+|++..-+ .. ..+++ ... + ...+
T Consensus 132 ~~~l~gktvGIiGlG~IG~~vA~~l~~~G~~V~~~dr~-~~--~~~~~------------------~~~---~---~~~~ 184 (324)
T 3evt_A 132 TSTLTGQQLLIYGTGQIGQSLAAKASALGMHVIGVNTT-GH--PADHF------------------HET---V---AFTA 184 (324)
T ss_dssp CCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS-CC--CCTTC------------------SEE---E---EGGG
T ss_pred CccccCCeEEEECcCHHHHHHHHHHHhCCCEEEEECCC-cc--hhHhH------------------hhc---c---ccCC
Confidence 56899999999999999999999999999998765322 10 00111 000 0 0011
Q ss_pred CCCccccccceEecCCC-----cCccchhhHHHhhhcCceEEEeCCCCC-CCHHH-HHHHHHCCce-Eecccccccccce
Q 006671 491 EAKPWNERCDVAFPCAS-----QNEIDQSDAINLVNSGCRILVEGSNMP-CTPEA-VDVLKKANVL-IAPAMAAGAGGVV 562 (636)
Q Consensus 491 ~~eil~~~cDIliPcA~-----~n~It~enA~~l~~~~akiVvEgAN~P-~T~eA-~~iL~~rGIl-viPD~~aNAGGVi 562 (636)
-++++ ..|||++-|.. .+.|+.+....+ +.++ +++--|-++ +..+| .+.|++..|. ..=|...+=-=-.
T Consensus 185 l~ell-~~aDvV~l~lPlt~~t~~li~~~~l~~m-k~ga-ilIN~aRG~~vd~~aL~~aL~~g~i~gA~lDV~~~EPl~~ 261 (324)
T 3evt_A 185 TADAL-ATANFIVNALPLTPTTHHLFSTELFQQT-KQQP-MLINIGRGPAVDTTALMTALDHHQLSMAALDVTEPEPLPT 261 (324)
T ss_dssp CHHHH-HHCSEEEECCCCCGGGTTCBSHHHHHTC-CSCC-EEEECSCGGGBCHHHHHHHHHTTSCSEEEESSCSSSSCCT
T ss_pred HHHHH-hhCCEEEEcCCCchHHHHhcCHHHHhcC-CCCC-EEEEcCCChhhhHHHHHHHHHhCCceEEEeCCCCCCCCCC
Confidence 12222 37899987754 466666655544 3344 555666666 45444 4677777664 3444443321000
Q ss_pred eecchhccc---cCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 006671 563 AGELELNQE---CNMVHWSPEDFESKLQEAMKQTYQRAL 598 (636)
Q Consensus 563 vS~~E~~qN---~~~~~ws~eeV~~rL~~~m~~~~~~v~ 598 (636)
-+-+--..| ..|+.|.-++..+++-+...+.+.+.+
T Consensus 262 ~~pL~~~~nvilTPHia~~t~~~~~~~~~~~~~nl~~~l 300 (324)
T 3evt_A 262 DHPLWQRDDVLITPHISGQIAHFRATVFPIFAANFAQFV 300 (324)
T ss_dssp TCGGGGCSSEEECCSCTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred CChhhcCCCEEEcCccccChHHHHHHHHHHHHHHHHHHH
Confidence 111111122 456666555555555444444444433
No 45
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=96.32 E-value=0.045 Score=57.91 Aligned_cols=158 Identities=15% Similarity=0.075 Sum_probs=87.5
Q ss_pred CCCCCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeC
Q 006671 411 NKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD 490 (636)
Q Consensus 411 g~~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~ 490 (636)
+.+|.|+||.|.|+|++|+.+|+.|...|++|++. |. .. ..+. . .. .++++.+
T Consensus 155 ~~~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~-d~-------~~-~~~~---~---~~------------~g~~~~~ 207 (352)
T 3gg9_A 155 GRVLKGQTLGIFGYGKIGQLVAGYGRAFGMNVLVW-GR-------EN-SKER---A---RA------------DGFAVAE 207 (352)
T ss_dssp BCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEE-CS-------HH-HHHH---H---HH------------TTCEECS
T ss_pred CccCCCCEEEEEeECHHHHHHHHHHHhCCCEEEEE-CC-------CC-CHHH---H---Hh------------cCceEeC
Confidence 46799999999999999999999999999997654 32 21 0110 0 00 1233331
Q ss_pred C-CCccccccceEecCCC-----cCccchhhHHHhhhcCceEEEeCCCCC-CC-HHHHHHHHHCCce-Eecccccccccc
Q 006671 491 E-AKPWNERCDVAFPCAS-----QNEIDQSDAINLVNSGCRILVEGSNMP-CT-PEAVDVLKKANVL-IAPAMAAGAGGV 561 (636)
Q Consensus 491 ~-~eil~~~cDIliPcA~-----~n~It~enA~~l~~~~akiVvEgAN~P-~T-~eA~~iL~~rGIl-viPD~~aNAGGV 561 (636)
. ++++ ..|||++-|.. .+.|+.+....+ +.++ +++..|.++ +. ....+.|++.+|. ..=|...+=-=-
T Consensus 208 ~l~ell-~~aDiV~l~~Plt~~t~~li~~~~l~~m-k~ga-ilIN~aRg~~vd~~aL~~aL~~g~i~gA~lDV~~~EPl~ 284 (352)
T 3gg9_A 208 SKDALF-EQSDVLSVHLRLNDETRSIITVADLTRM-KPTA-LFVNTSRAELVEENGMVTALNRGRPGMAAIDVFETEPIL 284 (352)
T ss_dssp SHHHHH-HHCSEEEECCCCSTTTTTCBCHHHHTTS-CTTC-EEEECSCGGGBCTTHHHHHHHHTSSSEEEECCCSSSCCC
T ss_pred CHHHHH-hhCCEEEEeccCcHHHHHhhCHHHHhhC-CCCc-EEEECCCchhhcHHHHHHHHHhCCccEEEecccCCCCCC
Confidence 1 2222 37899987664 345655554444 3344 555667666 33 3446888888874 233332221100
Q ss_pred eeecchhccc---cCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 006671 562 VAGELELNQE---CNMVHWSPEDFESKLQEAMKQTYQRAL 598 (636)
Q Consensus 562 ivS~~E~~qN---~~~~~ws~eeV~~rL~~~m~~~~~~v~ 598 (636)
.-+-+--..| ..|..|.-++..+++.+...+.+.+.+
T Consensus 285 ~~~pL~~~~nvilTPHia~~t~e~~~~~~~~~~~ni~~~~ 324 (352)
T 3gg9_A 285 QGHTLLRMENCICTPHIGYVERESYEMYFGIAFQNILDIL 324 (352)
T ss_dssp SCCGGGGCTTEEECCSCTTCBHHHHHHHHHHHHHHHHHHH
T ss_pred CCChhhcCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 0111111122 457777766666666444444444433
No 46
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=96.32 E-value=0.0056 Score=63.51 Aligned_cols=109 Identities=22% Similarity=0.171 Sum_probs=65.7
Q ss_pred CCCCCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeC
Q 006671 411 NKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD 490 (636)
Q Consensus 411 g~~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~ 490 (636)
+.++.|+||.|.|+|++|+.+|+.|...|++|++ .|.+ ++ ... .. .. ++++.+
T Consensus 137 ~~~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~-~d~~-----~~---~~~---~~----~~-----------g~~~~~ 189 (313)
T 2ekl_A 137 GLELAGKTIGIVGFGRIGTKVGIIANAMGMKVLA-YDIL-----DI---REK---AE----KI-----------NAKAVS 189 (313)
T ss_dssp CCCCTTCEEEEESCSHHHHHHHHHHHHTTCEEEE-ECSS-----CC---HHH---HH----HT-----------TCEECC
T ss_pred CCCCCCCEEEEEeeCHHHHHHHHHHHHCCCEEEE-ECCC-----cc---hhH---HH----hc-----------CceecC
Confidence 4579999999999999999999999999999654 4431 11 111 00 00 222222
Q ss_pred CCCccccccceEecCCC-----cCccchhhHHHhhhcCceEEEeCCCCC-CCHHH-HHHHHHCCce
Q 006671 491 EAKPWNERCDVAFPCAS-----QNEIDQSDAINLVNSGCRILVEGSNMP-CTPEA-VDVLKKANVL 549 (636)
Q Consensus 491 ~~eil~~~cDIliPcA~-----~n~It~enA~~l~~~~akiVvEgAN~P-~T~eA-~~iL~~rGIl 549 (636)
.++++ ..|||++-|.. .+.|+.+....+ +.++ +++.-+-++ ++.++ .+.|++.+|.
T Consensus 190 l~ell-~~aDvVvl~~P~~~~t~~li~~~~l~~m-k~ga-~lIn~arg~~vd~~aL~~aL~~g~i~ 252 (313)
T 2ekl_A 190 LEELL-KNSDVISLHVTVSKDAKPIIDYPQFELM-KDNV-IIVNTSRAVAVNGKALLDYIKKGKVY 252 (313)
T ss_dssp HHHHH-HHCSEEEECCCCCTTSCCSBCHHHHHHS-CTTE-EEEESSCGGGBCHHHHHHHHHTTCEE
T ss_pred HHHHH-hhCCEEEEeccCChHHHHhhCHHHHhcC-CCCC-EEEECCCCcccCHHHHHHHHHcCCCc
Confidence 12222 37899988764 355665554444 3344 444555554 55444 5677776663
No 47
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=96.25 E-value=0.0093 Score=60.98 Aligned_cols=110 Identities=20% Similarity=0.310 Sum_probs=71.4
Q ss_pred cEEEEecCccHHHHHHHHHHHC-CCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeCC-CCc
Q 006671 417 LRCVVSGSGKIAMHVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE-AKP 494 (636)
Q Consensus 417 krVaIqGfGNVG~~aAe~L~e~-GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~~-~ei 494 (636)
.+|.|+|+|++|...++.|.+. +.++++|+|. +.+.+ .+..+. ++.....++ +++
T Consensus 2 ~~vgiiG~G~~g~~~~~~l~~~~~~~~~~v~d~----------~~~~~---~~~~~~----------~~~~~~~~~~~~~ 58 (325)
T 2ho3_A 2 LKLGVIGTGAISHHFIEAAHTSGEYQLVAIYSR----------KLETA---ATFASR----------YQNIQLFDQLEVF 58 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTSEEEEEEECS----------SHHHH---HHHGGG----------SSSCEEESCHHHH
T ss_pred eEEEEEeCCHHHHHHHHHHHhCCCeEEEEEEeC----------CHHHH---HHHHHH----------cCCCeEeCCHHHH
Confidence 4799999999999999988876 6889999987 33332 111111 111122222 334
Q ss_pred cccccceEecCCCcCccchhhHHHhhhcCceEEEeCCCCCCCH-HHHH---HHHHCCceEe
Q 006671 495 WNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTP-EAVD---VLKKANVLIA 551 (636)
Q Consensus 495 l~~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~-eA~~---iL~~rGIlvi 551 (636)
++.++|+++-|.. +..+.+.+...++.|..+++|-- +.+|. ++.+ ..+++|+.+.
T Consensus 59 l~~~~D~V~i~tp-~~~h~~~~~~al~~gk~V~~EKP-~~~~~~~~~~l~~~a~~~g~~~~ 117 (325)
T 2ho3_A 59 FKSSFDLVYIASP-NSLHFAQAKAALSAGKHVILEKP-AVSQPQEWFDLIQTAEKNNCFIF 117 (325)
T ss_dssp HTSSCSEEEECSC-GGGHHHHHHHHHHTTCEEEEESS-CCSSHHHHHHHHHHHHHTTCCEE
T ss_pred hCCCCCEEEEeCC-hHHHHHHHHHHHHcCCcEEEecC-CcCCHHHHHHHHHHHHHcCCEEE
Confidence 4457999998875 55677777777788999999942 22343 3333 3467787665
No 48
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=96.25 E-value=0.041 Score=55.49 Aligned_cols=130 Identities=16% Similarity=0.110 Sum_probs=76.7
Q ss_pred hhHHHHHHHHHHHHhCCCCCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCC
Q 006671 396 GYGLVFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRS 475 (636)
Q Consensus 396 G~GV~~~~~~~l~~~g~~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~ 475 (636)
+.|++..++ ..+.++++++++|.|.|.+|+.++..|.+.|++ |.|.+. +.+++..+.+.....+.
T Consensus 103 ~~G~~~~L~----~~~~~~~~~~vlvlGaGg~g~a~a~~L~~~G~~-v~v~~R----------~~~~a~~l~~~~~~~~~ 167 (272)
T 1p77_A 103 GIGLVTDLQ----RLNWLRPNQHVLILGAGGATKGVLLPLLQAQQN-IVLANR----------TFSKTKELAERFQPYGN 167 (272)
T ss_dssp HHHHHHHHH----HTTCCCTTCEEEEECCSHHHHTTHHHHHHTTCE-EEEEES----------SHHHHHHHHHHHGGGSC
T ss_pred HHHHHHHHH----HhCCCcCCCEEEEECCcHHHHHHHHHHHHCCCE-EEEEEC----------CHHHHHHHHHHccccCC
Confidence 677766554 457789999999999999999999999999977 567776 33443333221111111
Q ss_pred ccccccccCCceeeCCCCccccccceEecCCCcCccch---hhHHHhhhcCceEEEeCCCCC-C-CHHHHHHHHHCCce-
Q 006671 476 LRDYSKTYARSKYYDEAKPWNERCDVAFPCASQNEIDQ---SDAINLVNSGCRILVEGSNMP-C-TPEAVDVLKKANVL- 549 (636)
Q Consensus 476 l~~y~~~~p~a~~i~~~eil~~~cDIliPcA~~n~It~---enA~~l~~~~akiVvEgAN~P-~-T~eA~~iL~~rGIl- 549 (636)
+ ...+.+++-..++||+|-|+.-..... -+...+ . ...+|++-.-+| . |+- .+..+++|+.
T Consensus 168 ~----------~~~~~~~~~~~~~DivIn~t~~~~~~~~~~i~~~~l-~-~~~~v~D~~y~p~~~t~l-l~~a~~~G~~~ 234 (272)
T 1p77_A 168 I----------QAVSMDSIPLQTYDLVINATSAGLSGGTASVDAEIL-K-LGSAFYDMQYAKGTDTPF-IALCKSLGLTN 234 (272)
T ss_dssp E----------EEEEGGGCCCSCCSEEEECCCC-------CCCHHHH-H-HCSCEEESCCCTTSCCHH-HHHHHHTTCCC
T ss_pred e----------EEeeHHHhccCCCCEEEECCCCCCCCCCCCCCHHHc-C-CCCEEEEeeCCCCcCCHH-HHHHHHcCCCE
Confidence 1 111111111137999999887543210 011112 1 235677777777 3 664 4567889987
Q ss_pred Eecc
Q 006671 550 IAPA 553 (636)
Q Consensus 550 viPD 553 (636)
+++.
T Consensus 235 ~v~G 238 (272)
T 1p77_A 235 VSDG 238 (272)
T ss_dssp EECS
T ss_pred eeCC
Confidence 7754
No 49
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=96.25 E-value=0.023 Score=59.33 Aligned_cols=107 Identities=17% Similarity=0.261 Sum_probs=67.0
Q ss_pred CCCCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeCC
Q 006671 412 KELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE 491 (636)
Q Consensus 412 ~~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~~ 491 (636)
.++.|++|.|.|+|++|+.+|+.|...|.+|+ +.|.+ ++ .+. ..+ + +..+.+.
T Consensus 142 ~~l~g~~vgIIG~G~iG~~vA~~l~~~G~~V~-~~d~~-----~~---~~~---~~~----------~-----g~~~~~l 194 (333)
T 2d0i_A 142 ESLYGKKVGILGMGAIGKAIARRLIPFGVKLY-YWSRH-----RK---VNV---EKE----------L-----KARYMDI 194 (333)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHGGGTCEEE-EECSS-----CC---HHH---HHH----------H-----TEEECCH
T ss_pred CCCCcCEEEEEccCHHHHHHHHHHHHCCCEEE-EECCC-----cc---hhh---hhh----------c-----CceecCH
Confidence 58999999999999999999999999999964 44541 21 111 010 0 1222111
Q ss_pred CCccccccceEecCCCcC-----ccchhhHHHhhhcCceEEEeCCCCCC-CHHH-HHHHHHCCce
Q 006671 492 AKPWNERCDVAFPCASQN-----EIDQSDAINLVNSGCRILVEGSNMPC-TPEA-VDVLKKANVL 549 (636)
Q Consensus 492 ~eil~~~cDIliPcA~~n-----~It~enA~~l~~~~akiVvEgAN~P~-T~eA-~~iL~~rGIl 549 (636)
++++ .+||+++.|...+ .|+.+....+ +.+ +|+--+.+++ +.++ .+.|.+..|.
T Consensus 195 ~e~l-~~aDiVil~vp~~~~t~~~i~~~~~~~m-k~g--ilin~srg~~vd~~aL~~aL~~~~i~ 255 (333)
T 2d0i_A 195 DELL-EKSDIVILALPLTRDTYHIINEERVKKL-EGK--YLVNIGRGALVDEKAVTEAIKQGKLK 255 (333)
T ss_dssp HHHH-HHCSEEEECCCCCTTTTTSBCHHHHHHT-BTC--EEEECSCGGGBCHHHHHHHHHTTCBC
T ss_pred HHHH-hhCCEEEEcCCCChHHHHHhCHHHHhhC-CCC--EEEECCCCcccCHHHHHHHHHcCCce
Confidence 1222 3799999887655 5554444444 334 7777777774 4433 4677776554
No 50
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=96.19 E-value=0.038 Score=57.52 Aligned_cols=109 Identities=9% Similarity=0.140 Sum_probs=65.2
Q ss_pred CCCCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeCC
Q 006671 412 KELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE 491 (636)
Q Consensus 412 ~~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~~ 491 (636)
.++.|++|.|+|+|++|+.+|+.|...|.+|++ .|. +++ ..+.+ . .+ +..+.+.
T Consensus 151 ~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~-~d~-----~~~--~~~~~------~-------~~-----g~~~~~l 204 (330)
T 2gcg_A 151 YGLTQSTVGIIGLGRIGQAIARRLKPFGVQRFL-YTG-----RQP--RPEEA------A-------EF-----QAEFVST 204 (330)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHGGGTCCEEE-EES-----SSC--CHHHH------H-------TT-----TCEECCH
T ss_pred cCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEE-ECC-----CCc--chhHH------H-------hc-----CceeCCH
Confidence 578999999999999999999999999999654 443 111 11111 0 00 1222211
Q ss_pred CCccccccceEecCCCc-----CccchhhHHHhhhcCceEEEeCCCCC-CCHH-HHHHHHHCCce
Q 006671 492 AKPWNERCDVAFPCASQ-----NEIDQSDAINLVNSGCRILVEGSNMP-CTPE-AVDVLKKANVL 549 (636)
Q Consensus 492 ~eil~~~cDIliPcA~~-----n~It~enA~~l~~~~akiVvEgAN~P-~T~e-A~~iL~~rGIl 549 (636)
++++ .+||+++.|... +.|+.+....+ +.++ +|+--+.++ ++.+ ..+.|.+.+|.
T Consensus 205 ~e~l-~~aDvVi~~vp~~~~t~~~i~~~~~~~m-k~ga-ilIn~srg~~v~~~aL~~aL~~~~i~ 266 (330)
T 2gcg_A 205 PELA-AQSDFIVVACSLTPATEGLCNKDFFQKM-KETA-VFINISRGDVVNQDDLYQALASGKIA 266 (330)
T ss_dssp HHHH-HHCSEEEECCCCCTTTTTCBSHHHHHHS-CTTC-EEEECSCGGGBCHHHHHHHHHHTSSS
T ss_pred HHHH-hhCCEEEEeCCCChHHHHhhCHHHHhcC-CCCc-EEEECCCCcccCHHHHHHHHHcCCcc
Confidence 1222 379999888754 44554444443 3344 445566655 4444 45677776653
No 51
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=96.18 E-value=0.022 Score=58.44 Aligned_cols=132 Identities=17% Similarity=0.138 Sum_probs=78.6
Q ss_pred chhHHHHHHHHHHHHhC-CCCCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhc
Q 006671 395 TGYGLVFFAQLILADMN-KELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQ 473 (636)
Q Consensus 395 TG~GV~~~~~~~l~~~g-~~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~ 473 (636)
.+.|+..+++ ..+ .+++|++|+|.|.|.+|+.++..|.+.|++-|.|.+. +.+++..+.+ .-
T Consensus 123 d~~G~~~~l~----~~~~~~l~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR----------~~~ka~~la~---~~ 185 (297)
T 2egg_A 123 DGLGYVQALE----EEMNITLDGKRILVIGAGGGARGIYFSLLSTAAERIDMANR----------TVEKAERLVR---EG 185 (297)
T ss_dssp HHHHHHHHHH----HHTTCCCTTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECS----------SHHHHHHHHH---HS
T ss_pred CHHHHHHHHH----HhCCCCCCCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeC----------CHHHHHHHHH---Hh
Confidence 3556655554 445 7899999999999999999999999999844677776 2334332321 11
Q ss_pred CCccccccccCCceeeCCCCc--cccccceEecCCCcCccchh-----hHHHhhhcCceEEEeCCCCC-CCHHHHHHHHH
Q 006671 474 RSLRDYSKTYARSKYYDEAKP--WNERCDVAFPCASQNEIDQS-----DAINLVNSGCRILVEGSNMP-CTPEAVDVLKK 545 (636)
Q Consensus 474 g~l~~y~~~~p~a~~i~~~ei--l~~~cDIliPcA~~n~It~e-----nA~~l~~~~akiVvEgAN~P-~T~eA~~iL~~ 545 (636)
+.. .+ +.++-+++ .-.++||+|-|+.-...... +...| + .-.+|++-.-+| .|+ -.+..++
T Consensus 186 ~~~------~~--~~~~~~~~~~~~~~aDivIn~t~~~~~~~~~~~~i~~~~l-~-~~~~v~D~~y~P~~T~-ll~~A~~ 254 (297)
T 2egg_A 186 DER------RS--AYFSLAEAETRLAEYDIIINTTSVGMHPRVEVQPLSLERL-R-PGVIVSDIIYNPLETK-WLKEAKA 254 (297)
T ss_dssp CSS------SC--CEECHHHHHHTGGGCSEEEECSCTTCSSCCSCCSSCCTTC-C-TTCEEEECCCSSSSCH-HHHHHHH
T ss_pred hhc------cC--ceeeHHHHHhhhccCCEEEECCCCCCCCCCCCCCCCHHHc-C-CCCEEEEcCCCCCCCH-HHHHHHH
Confidence 100 00 11110111 11378999988865432110 01112 1 235778887778 454 5566788
Q ss_pred CCceEeccc
Q 006671 546 ANVLIAPAM 554 (636)
Q Consensus 546 rGIlviPD~ 554 (636)
+|+.++++.
T Consensus 255 ~G~~~v~Gl 263 (297)
T 2egg_A 255 RGARVQNGV 263 (297)
T ss_dssp TTCEEECSH
T ss_pred CcCEEECCH
Confidence 999888763
No 52
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=96.17 E-value=0.0093 Score=61.72 Aligned_cols=52 Identities=21% Similarity=0.306 Sum_probs=45.2
Q ss_pred CCcchhHHHHHHHHHHHHhCCCCCCcEEEEecCcc-HHHHHHHHHHHCCCEEEEEeCC
Q 006671 392 TEATGYGLVFFAQLILADMNKELKGLRCVVSGSGK-IAMHVLEKLIAYGAIPVSVSDA 448 (636)
Q Consensus 392 ~eATG~GV~~~~~~~l~~~g~~l~GkrVaIqGfGN-VG~~aAe~L~e~GAkVVaVSDs 448 (636)
...|.+|++ ++|++.+.+++|++|+|.|.|+ ||..+|..|...|++ |+|+++
T Consensus 141 ~PcTp~gv~----~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAt-Vtv~hs 193 (285)
T 3l07_A 141 ESCTPKGIM----TMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNAKAT-VTTCHR 193 (285)
T ss_dssp CCHHHHHHH----HHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCE-EEEECT
T ss_pred CCCCHHHHH----HHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCe-EEEEeC
Confidence 468999986 4566678999999999999987 899999999999998 688876
No 53
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=96.16 E-value=0.049 Score=55.76 Aligned_cols=128 Identities=18% Similarity=0.144 Sum_probs=77.3
Q ss_pred hhHHHHHHHHHHHHhCCCCCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCC
Q 006671 396 GYGLVFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRS 475 (636)
Q Consensus 396 G~GV~~~~~~~l~~~g~~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~ 475 (636)
|+|.+.++ +..+.+++|++++|.|.|.+|+.++..|.+.|++-|.|.+. +.++...+.+.....+.
T Consensus 110 ~~G~~~~L----~~~~~~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R----------~~~~a~~la~~~~~~~~ 175 (281)
T 3o8q_A 110 GEGLVQDL----LAQQVLLKGATILLIGAGGAARGVLKPLLDQQPASITVTNR----------TFAKAEQLAELVAAYGE 175 (281)
T ss_dssp HHHHHHHH----HHTTCCCTTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEES----------SHHHHHHHHHHHGGGSC
T ss_pred HHHHHHHH----HHhCCCccCCEEEEECchHHHHHHHHHHHhcCCCeEEEEEC----------CHHHHHHHHHHhhccCC
Confidence 66766555 45678899999999999999999999999999744677776 23443333322111111
Q ss_pred ccccccccCCceeeCCCCccccccceEecCCCcCccchh---hHHHhhhcCceEEEeCCCCC-CCHHHHHHHHHCCce-E
Q 006671 476 LRDYSKTYARSKYYDEAKPWNERCDVAFPCASQNEIDQS---DAINLVNSGCRILVEGSNMP-CTPEAVDVLKKANVL-I 550 (636)
Q Consensus 476 l~~y~~~~p~a~~i~~~eil~~~cDIliPcA~~n~It~e---nA~~l~~~~akiVvEgAN~P-~T~eA~~iL~~rGIl-v 550 (636)
....+.+++ ..++||+|-|..-+..... +...+ ....+|++-.-.| .|+-. +..+++|+. +
T Consensus 176 ----------~~~~~~~~l-~~~aDiIInaTp~gm~~~~~~l~~~~l--~~~~~V~DlvY~P~~T~ll-~~A~~~G~~~~ 241 (281)
T 3o8q_A 176 ----------VKAQAFEQL-KQSYDVIINSTSASLDGELPAIDPVIF--SSRSVCYDMMYGKGYTVFN-QWARQHGCAQA 241 (281)
T ss_dssp ----------EEEEEGGGC-CSCEEEEEECSCCCC----CSCCGGGE--EEEEEEEESCCCSSCCHHH-HHHHHTTCSEE
T ss_pred ----------eeEeeHHHh-cCCCCEEEEcCcCCCCCCCCCCCHHHh--CcCCEEEEecCCCccCHHH-HHHHHCCCCEE
Confidence 111221222 1579999977754432111 11222 1356788988778 56643 566788875 4
Q ss_pred e
Q 006671 551 A 551 (636)
Q Consensus 551 i 551 (636)
+
T Consensus 242 ~ 242 (281)
T 3o8q_A 242 I 242 (281)
T ss_dssp E
T ss_pred E
Confidence 4
No 54
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=96.14 E-value=0.048 Score=57.55 Aligned_cols=114 Identities=18% Similarity=0.213 Sum_probs=69.5
Q ss_pred CCCCCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeC
Q 006671 411 NKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD 490 (636)
Q Consensus 411 g~~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~ 490 (636)
+.++.|+||.|.|+|++|+.+|+.|...|++|++. |.+. + . . +.. ..++.+
T Consensus 143 ~~~l~gktvgIiGlG~IG~~vA~~l~~~G~~V~~~-d~~~-----~--~--~-------------~~~------~~~~~~ 193 (343)
T 2yq5_A 143 SNEIYNLTVGLIGVGHIGSAVAEIFSAMGAKVIAY-DVAY-----N--P--E-------------FEP------FLTYTD 193 (343)
T ss_dssp BCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEE-CSSC-----C--G--G-------------GTT------TCEECC
T ss_pred ccccCCCeEEEEecCHHHHHHHHHHhhCCCEEEEE-CCCh-----h--h--h-------------hhc------cccccC
Confidence 45789999999999999999999999999997654 3311 0 0 0 000 111222
Q ss_pred CCCccccccceEecCCC-----cCccchhhHHHhhhcCceEEEeCCCCC-CCHHH-HHHHHHCCce-Eeccccc
Q 006671 491 EAKPWNERCDVAFPCAS-----QNEIDQSDAINLVNSGCRILVEGSNMP-CTPEA-VDVLKKANVL-IAPAMAA 556 (636)
Q Consensus 491 ~~eil~~~cDIliPcA~-----~n~It~enA~~l~~~~akiVvEgAN~P-~T~eA-~~iL~~rGIl-viPD~~a 556 (636)
-++++ ..|||++-|.. .+.|+.+....+ +.++ +++--|-++ +..+| .+.|++..|. .+=|...
T Consensus 194 l~ell-~~aDvV~l~~Plt~~t~~li~~~~l~~m-k~ga-ilIN~aRg~~vd~~aL~~aL~~g~i~gA~LDV~~ 264 (343)
T 2yq5_A 194 FDTVL-KEADIVSLHTPLFPSTENMIGEKQLKEM-KKSA-YLINCARGELVDTGALIKALQDGEIAGAGLDTLA 264 (343)
T ss_dssp HHHHH-HHCSEEEECCCCCTTTTTCBCHHHHHHS-CTTC-EEEECSCGGGBCHHHHHHHHHHTSSSCEEESCCT
T ss_pred HHHHH-hcCCEEEEcCCCCHHHHHHhhHHHHhhC-CCCc-EEEECCCChhhhHHHHHHHHHcCCCcEEEecccc
Confidence 12222 37899887665 466766655554 3344 555566665 44444 5778777663 3334433
No 55
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=96.12 E-value=0.066 Score=56.22 Aligned_cols=109 Identities=15% Similarity=0.180 Sum_probs=65.9
Q ss_pred CCCCCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeC
Q 006671 411 NKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD 490 (636)
Q Consensus 411 g~~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~ 490 (636)
+.++.|+||.|.|+|++|+.+|+.|...|++|++. |. .. +.+. .. .. ++++.+
T Consensus 160 ~~~l~g~tvgIIGlG~IG~~vA~~l~~~G~~V~~~-d~-------~~-~~~~---~~----~~-----------g~~~~~ 212 (335)
T 2g76_A 160 GTELNGKTLGILGLGRIGREVATRMQSFGMKTIGY-DP-------II-SPEV---SA----SF-----------GVQQLP 212 (335)
T ss_dssp BCCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEE-CS-------SS-CHHH---HH----HT-----------TCEECC
T ss_pred CcCCCcCEEEEEeECHHHHHHHHHHHHCCCEEEEE-CC-------Cc-chhh---hh----hc-----------CceeCC
Confidence 45799999999999999999999999999997643 33 21 1111 00 00 222222
Q ss_pred CCCccccccceEecCCCc-----CccchhhHHHhhhcCceEEEeCCCCC-CCHHH-HHHHHHCCce
Q 006671 491 EAKPWNERCDVAFPCASQ-----NEIDQSDAINLVNSGCRILVEGSNMP-CTPEA-VDVLKKANVL 549 (636)
Q Consensus 491 ~~eil~~~cDIliPcA~~-----n~It~enA~~l~~~~akiVvEgAN~P-~T~eA-~~iL~~rGIl 549 (636)
.++++ ..|||++-|..- +.|+.+....+ +.++ +++.-+-++ +..++ .+.|++..|.
T Consensus 213 l~ell-~~aDvV~l~~P~t~~t~~li~~~~l~~m-k~ga-ilIN~arg~vvd~~aL~~aL~~g~i~ 275 (335)
T 2g76_A 213 LEEIW-PLCDFITVHTPLLPSTTGLLNDNTFAQC-KKGV-RVVNCARGGIVDEGALLRALQSGQCA 275 (335)
T ss_dssp HHHHG-GGCSEEEECCCCCTTTTTSBCHHHHTTS-CTTE-EEEECSCTTSBCHHHHHHHHHHTSEE
T ss_pred HHHHH-hcCCEEEEecCCCHHHHHhhCHHHHhhC-CCCc-EEEECCCccccCHHHHHHHHHhCCcc
Confidence 12222 378999887654 45555444443 3344 455555565 44443 5778777664
No 56
>1gq2_A Malic enzyme; oxidoreductase, pigeon liver, NADP-dependent, NAD-NADP selectivity, decarboxylase, malate, Mn2+; HET: NAP; 2.5A {Columba livia} SCOP: c.2.1.7 c.58.1.3 PDB: 2aw5_A
Probab=96.12 E-value=0.028 Score=62.76 Aligned_cols=176 Identities=15% Similarity=0.150 Sum_probs=126.2
Q ss_pred CCHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCChhHHHHHHHHhhhhhCCCCccccCcccccCCCCCCCCcchhHHHH
Q 006671 322 KSDNEIMRFCQSFMNEIHRYLGPDKDLPSEEMGVGTREMGYLFGQYRRLAGHFQGSFTGPRIFWSGSSLRTEATGYGLVF 401 (636)
Q Consensus 322 ~S~~El~r~~r~f~~eL~~~IGp~~DVpA~DiGt~~rem~~m~~~y~~l~g~~~g~vTGKp~~~GGs~~r~eATG~GV~~ 401 (636)
.+.+|-..|...||..+.+..||..-|-=+|++. ..--.+-+.|+.- .-++. +--.-||-=+..
T Consensus 204 v~g~eyd~fvdefv~av~~~fGp~~~I~~EDf~~--~~af~il~ryr~~----ipvFn----------DDiqGTa~V~lA 267 (555)
T 1gq2_A 204 IRGQAYDDLLDEFMEAVTSRYGMNCLIQFEDFAN--ANAFRLLHKYRNK----YCTFN----------DDIQGTASVAVA 267 (555)
T ss_dssp CCTHHHHHHHHHHHHHHHHHHCTTCEEEECSCCH--HHHHHHHHHHTTT----SEEEE----------TTTHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHhhCCCcEEeecccCC--ccHHHHHHHHhcc----CCEec----------CccchHHHHHHH
Confidence 4677888999999999999999988888899864 4555567777651 11111 112345555666
Q ss_pred HHHHHHHHhCCCCCCcEEEEecCccHHHHHHHHHHH----CCC------EEEEEeCCCCceeCCC-CCCHHHHHHHHHHH
Q 006671 402 FAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIA----YGA------IPVSVSDAKGYLVDED-GFDYMKISFLRDIK 470 (636)
Q Consensus 402 ~~~~~l~~~g~~l~GkrVaIqGfGNVG~~aAe~L~e----~GA------kVVaVSDs~G~Iydpd-GLDve~L~~L~~~k 470 (636)
++-.+++-.|.+|+..||++.|.|.-|..+|+.|.. .|. +=+-+.|++|.|++.. +++..+
T Consensus 268 gllnAlki~gk~l~d~riv~~GAGaAg~gia~ll~~~~~~~G~~~eeA~~~i~~~D~~Gli~~~r~~l~~~k-------- 339 (555)
T 1gq2_A 268 GLLAALRITKNRLSDHTVLFQGAGEAALGIANLIVMAMQKEGVSKEEAIKRIWMVDSKGLIVKGRASLTPEK-------- 339 (555)
T ss_dssp HHHHHHHHHTSCGGGCCEEEECCSHHHHHHHHHHHHHHHHHTCCHHHHHTTEEEEETTEECBTTCSSCCTTG--------
T ss_pred HHHHHHHHhCCChhhcEEEEECCCHHHHHHHHHHHHHHHHcCCChHHHhCcEEEEECCCeeeCCCCCchHHH--------
Confidence 788888888999999999999999999999999987 684 4478999999999853 354322
Q ss_pred hhcCCccccccccCCceeeCCCCcc----ccccceEecCCC-cCccchhhHHHhhh-cCceEEEeCCC
Q 006671 471 SQQRSLRDYSKTYARSKYYDEAKPW----NERCDVAFPCAS-QNEIDQSDAINLVN-SGCRILVEGSN 532 (636)
Q Consensus 471 ~~~g~l~~y~~~~p~a~~i~~~eil----~~~cDIliPcA~-~n~It~enA~~l~~-~~akiVvEgAN 532 (636)
..|++... ....+. .++.||||=++. .+.+|++-.+.+.+ +.-.||---||
T Consensus 340 ------~~~A~~~~-----~~~~L~eav~~vkp~vlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLSN 396 (555)
T 1gq2_A 340 ------EHFAHEHC-----EMKNLEDIVKDIKPTVLIGVAAIGGAFTQQILQDMAAFNKRPIIFALSN 396 (555)
T ss_dssp ------GGGCBSCC-----CCCCHHHHHHHHCCSEEEECSCCTTCSCHHHHHHHHHHCSSCEEEECCS
T ss_pred ------HHHHhhcC-----CCCCHHHHHhhcCCCEEEEecCCCCCCCHHHHHHHHhcCCCCEEEECCC
Confidence 12221110 001222 347999999996 69999999998853 34678888888
No 57
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=96.08 E-value=0.075 Score=58.90 Aligned_cols=109 Identities=20% Similarity=0.221 Sum_probs=65.8
Q ss_pred CCCCCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeC
Q 006671 411 NKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD 490 (636)
Q Consensus 411 g~~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~ 490 (636)
+.++.|+||.|+|+|++|+.+|+.|...|.+|++ .|. .. +.+.. .+ . ++...+
T Consensus 137 ~~~l~g~~vgIIG~G~IG~~vA~~l~~~G~~V~~-~d~-------~~-~~~~a---~~----~-----------g~~~~~ 189 (529)
T 1ygy_A 137 GTEIFGKTVGVVGLGRIGQLVAQRIAAFGAYVVA-YDP-------YV-SPARA---AQ----L-----------GIELLS 189 (529)
T ss_dssp BCCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEE-ECT-------TS-CHHHH---HH----H-----------TCEECC
T ss_pred ccccCCCEEEEEeeCHHHHHHHHHHHhCCCEEEE-ECC-------CC-ChhHH---Hh----c-----------CcEEcC
Confidence 4579999999999999999999999999999654 343 22 22211 10 0 222222
Q ss_pred CCCccccccceEecCCC-----cCccchhhHHHhhhcCceEEEeCCCCC-CCHHH-HHHHHHCCce
Q 006671 491 EAKPWNERCDVAFPCAS-----QNEIDQSDAINLVNSGCRILVEGSNMP-CTPEA-VDVLKKANVL 549 (636)
Q Consensus 491 ~~eil~~~cDIliPcA~-----~n~It~enA~~l~~~~akiVvEgAN~P-~T~eA-~~iL~~rGIl 549 (636)
.++++ .+||+++-|.. .+.|+.+....+ +.++ +|+.-|-++ ++.++ .+.|.+.+|.
T Consensus 190 l~e~~-~~aDvV~l~~P~~~~t~~~i~~~~~~~~-k~g~-ilin~arg~iv~~~aL~~al~~g~i~ 252 (529)
T 1ygy_A 190 LDDLL-ARADFISVHLPKTPETAGLIDKEALAKT-KPGV-IIVNAARGGLVDEAALADAITGGHVR 252 (529)
T ss_dssp HHHHH-HHCSEEEECCCCSTTTTTCBCHHHHTTS-CTTE-EEEECSCTTSBCHHHHHHHHHTSSEE
T ss_pred HHHHH-hcCCEEEECCCCchHHHHHhCHHHHhCC-CCCC-EEEECCCCchhhHHHHHHHHHcCCcc
Confidence 12222 37999988854 456665444443 3344 555555655 44443 3667766553
No 58
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=96.05 E-value=0.0054 Score=62.58 Aligned_cols=111 Identities=20% Similarity=0.228 Sum_probs=69.0
Q ss_pred CcEEEEecCccHHHH-HHHHHHH-CCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeCCCC
Q 006671 416 GLRCVVSGSGKIAMH-VLEKLIA-YGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAK 493 (636)
Q Consensus 416 GkrVaIqGfGNVG~~-aAe~L~e-~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~~~e 493 (636)
-.+|.|+|+|++|.. .++.|.+ .+..+++|+|. +++-. ++ +. +..+ + .+.+..+
T Consensus 5 ~~~vgiiG~G~~g~~~~~~~l~~~~~~~lvav~d~-----~~~~~--~~---~~---~~~g-~----------~~~~~~~ 60 (319)
T 1tlt_A 5 KLRIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSP-----TRAKA--LP---IC---ESWR-I----------PYADSLS 60 (319)
T ss_dssp CEEEEEECCSTHHHHTHHHHHHSCSSEEEEEEECS-----SCTTH--HH---HH---HHHT-C----------CBCSSHH
T ss_pred cceEEEECCCHHHHHHHHHHHHhCCCeEEEEEECC-----CHHHH--HH---HH---HHcC-C----------CccCcHH
Confidence 468999999999985 7887766 47899999997 33321 11 11 1111 1 1111111
Q ss_pred ccccccceEecCCCcCccchhhHHHhhhcCceEEEeCCCCCCC-HHHHH---HHHHCCceEec
Q 006671 494 PWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCT-PEAVD---VLKKANVLIAP 552 (636)
Q Consensus 494 il~~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T-~eA~~---iL~~rGIlviP 552 (636)
.+..++|+++-|.. +..+.+.+...++.|..+++|-- +.+| .++.+ ..+++|+.+..
T Consensus 61 ~l~~~~D~V~i~tp-~~~h~~~~~~al~~G~~v~~eKP-~~~~~~~~~~l~~~a~~~g~~~~~ 121 (319)
T 1tlt_A 61 SLAASCDAVFVHSS-TASHFDVVSTLLNAGVHVCVDKP-LAENLRDAERLVELAARKKLTLMV 121 (319)
T ss_dssp HHHTTCSEEEECSC-TTHHHHHHHHHHHTTCEEEEESS-SCSSHHHHHHHHHHHHHTTCCEEE
T ss_pred HhhcCCCEEEEeCC-chhHHHHHHHHHHcCCeEEEeCC-CCCCHHHHHHHHHHHHHcCCeEEE
Confidence 12557999996654 66677778777888999999841 1123 33333 34677877654
No 59
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=96.04 E-value=0.062 Score=54.78 Aligned_cols=127 Identities=17% Similarity=0.176 Sum_probs=76.1
Q ss_pred hhHHHHHHHHHHHHhCCCCCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCC
Q 006671 396 GYGLVFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRS 475 (636)
Q Consensus 396 G~GV~~~~~~~l~~~g~~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~ 475 (636)
|+|.+.+ +|+..+.+++|++++|.|.|.+|+.++..|.+.|++-|.|.+. +.++...+.+.... +
T Consensus 103 ~~G~~~~---lL~~~~~~l~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R----------~~~~a~~la~~~~~-~- 167 (272)
T 3pwz_A 103 GIGLLRD---IEENLGEPLRNRRVLLLGAGGAVRGALLPFLQAGPSELVIANR----------DMAKALALRNELDH-S- 167 (272)
T ss_dssp HHHHHHH---HHTTSCCCCTTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECS----------CHHHHHHHHHHHCC-T-
T ss_pred HHHHHHH---HHHHcCCCccCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeC----------CHHHHHHHHHHhcc-C-
Confidence 5565544 2455678899999999999999999999999999744677776 23343333221110 0
Q ss_pred ccccccccCCceeeCCCCccccccceEecCCCcCccch---hhHHHhhhcCceEEEeCCCCC-CCHHHHHHHHHCCce
Q 006671 476 LRDYSKTYARSKYYDEAKPWNERCDVAFPCASQNEIDQ---SDAINLVNSGCRILVEGSNMP-CTPEAVDVLKKANVL 549 (636)
Q Consensus 476 l~~y~~~~p~a~~i~~~eil~~~cDIliPcA~~n~It~---enA~~l~~~~akiVvEgAN~P-~T~eA~~iL~~rGIl 549 (636)
....++-+++-..++||+|-|..-+.-.. -+...+ ....+|++-.-+| -|+ -.+.-+++|+.
T Consensus 168 ---------~~~~~~~~~l~~~~~DivInaTp~gm~~~~~~i~~~~l--~~~~~V~DlvY~P~~T~-ll~~A~~~G~~ 233 (272)
T 3pwz_A 168 ---------RLRISRYEALEGQSFDIVVNATSASLTADLPPLPADVL--GEAALAYELAYGKGLTP-FLRLAREQGQA 233 (272)
T ss_dssp ---------TEEEECSGGGTTCCCSEEEECSSGGGGTCCCCCCGGGG--TTCSEEEESSCSCCSCH-HHHHHHHHSCC
T ss_pred ---------CeeEeeHHHhcccCCCEEEECCCCCCCCCCCCCCHHHh--CcCCEEEEeecCCCCCH-HHHHHHHCCCC
Confidence 11222222222257999997765432111 011223 2456888988778 465 44455777775
No 60
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=96.04 E-value=0.0093 Score=60.52 Aligned_cols=113 Identities=20% Similarity=0.214 Sum_probs=71.5
Q ss_pred CCcEEEEecCccHHHH-HHHHHHH-CCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeCCC
Q 006671 415 KGLRCVVSGSGKIAMH-VLEKLIA-YGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEA 492 (636)
Q Consensus 415 ~GkrVaIqGfGNVG~~-aAe~L~e-~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~~~ 492 (636)
+-.||.|+|+|++|.. .++.|.+ .++.+++|+|. |.+.+..+. +..+ +. .+-+.+
T Consensus 5 ~~~~igiIG~G~~g~~~~~~~l~~~~~~~l~av~d~----------~~~~~~~~a---~~~~-~~---------~~~~~~ 61 (308)
T 3uuw_A 5 KNIKMGMIGLGSIAQKAYLPILTKSERFEFVGAFTP----------NKVKREKIC---SDYR-IM---------PFDSIE 61 (308)
T ss_dssp CCCEEEEECCSHHHHHHTHHHHTSCSSSEEEEEECS----------CHHHHHHHH---HHHT-CC---------BCSCHH
T ss_pred ccCcEEEEecCHHHHHHHHHHHHhCCCeEEEEEECC----------CHHHHHHHH---HHcC-CC---------CcCCHH
Confidence 3479999999999995 7887776 57899999997 334432221 1111 11 111224
Q ss_pred CccccccceEecCCCcCccchhhHHHhhhcCceEEEeCCCCCCC-HHHH---HHHHHCCceEecc
Q 006671 493 KPWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCT-PEAV---DVLKKANVLIAPA 553 (636)
Q Consensus 493 eil~~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T-~eA~---~iL~~rGIlviPD 553 (636)
+++. ++|+++-|.. +..+.+.+...++.|..+++|=- +-+| .++. +..+++|+.+...
T Consensus 62 ~ll~-~~D~V~i~tp-~~~h~~~~~~al~~gk~vl~EKP-~~~~~~~~~~l~~~a~~~g~~~~v~ 123 (308)
T 3uuw_A 62 SLAK-KCDCIFLHSS-TETHYEIIKILLNLGVHVYVDKP-LASTVSQGEELIELSTKKNLNLMVG 123 (308)
T ss_dssp HHHT-TCSEEEECCC-GGGHHHHHHHHHHTTCEEEECSS-SSSSHHHHHHHHHHHHHHTCCEEEC
T ss_pred HHHh-cCCEEEEeCC-cHhHHHHHHHHHHCCCcEEEcCC-CCCCHHHHHHHHHHHHHcCCEEEEe
Confidence 4566 8999997664 55677777777888999999841 1123 3333 3445677766543
No 61
>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A*
Probab=96.02 E-value=0.0076 Score=63.87 Aligned_cols=120 Identities=13% Similarity=0.089 Sum_probs=73.1
Q ss_pred cEEEEecCccHHHHHHHHHHHC----CCEEEEEeCCCCceeCCC--CCCH-HHHHHHHHHHhhcCCccccccccCCceee
Q 006671 417 LRCVVSGSGKIAMHVLEKLIAY----GAIPVSVSDAKGYLVDED--GFDY-MKISFLRDIKSQQRSLRDYSKTYARSKYY 489 (636)
Q Consensus 417 krVaIqGfGNVG~~aAe~L~e~----GAkVVaVSDs~G~Iydpd--GLDv-e~L~~L~~~k~~~g~l~~y~~~~p~a~~i 489 (636)
.+|.|.|+|+||+..++.|.+. +.+|++|+|++...++++ |++. ..+..+.. ...+.. .
T Consensus 5 i~vgIiG~G~VG~~~~~~l~~~~~g~~~~vvaV~d~~~~~~~~~~~gi~~~~~~~e~l~--~~~~~~------------~ 70 (358)
T 1ebf_A 5 VNVAVIGAGVVGSAFLDQLLAMKSTITYNLVLLAEAERSLISKDFSPLNVGSDWKAALA--ASTTKT------------L 70 (358)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCCCSSEEEEEEEECSSBEEECSSCSCCSCTTCHHHHHH--TCCCBC------------C
T ss_pred EEEEEEecCHHHHHHHHHHHhcCCCCCEEEEEEEECChhhhccccCCCCccccHHHHHh--cccCCC------------C
Confidence 5899999999999999999886 379999999987777777 8754 22211211 100100 0
Q ss_pred CCCCccc-----cccceEecCCCcCccchhhHHHhhhcCceEEE--eCCCCCCCHHHHHHH--HHCCceEe
Q 006671 490 DEAKPWN-----ERCDVAFPCASQNEIDQSDAINLVNSGCRILV--EGSNMPCTPEAVDVL--KKANVLIA 551 (636)
Q Consensus 490 ~~~eil~-----~~cDIliPcA~~n~It~enA~~l~~~~akiVv--EgAN~P~T~eA~~iL--~~rGIlvi 551 (636)
+-+.+++ ...||++-|+.... +.+.+...++.|..+|+ |.+......++.++. +++|+.+.
T Consensus 71 did~v~e~~~~~~~~DvVV~~t~~~~-~a~~~~~AL~aGkhVVtaNkkpla~~~~~~~eL~~A~~~gv~~~ 140 (358)
T 1ebf_A 71 PLDDLIAHLKTSPKPVILVDNTSSAY-IAGFYTKFVENGISIATPNKKAFSSDLATWKALFSNKPTNGFVY 140 (358)
T ss_dssp CHHHHHHHHTTCSSCEEEEECSCCHH-HHTTHHHHHHTTCEEECCCCGGGSSCHHHHHHHTCCCTTCCCEE
T ss_pred CHHHHHHHhhhccCCcEEEEcCCChH-HHHHHHHHHHCCCeEEecCcccccCCHHHHHHHHHHHHcCCEEE
Confidence 0011111 12399999987553 34444556688999996 443322225555543 34677665
No 62
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=96.01 E-value=0.0085 Score=63.03 Aligned_cols=83 Identities=8% Similarity=0.070 Sum_probs=60.2
Q ss_pred cEEEEecCccHHHHHHHHHHHC---------CCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCce
Q 006671 417 LRCVVSGSGKIAMHVLEKLIAY---------GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSK 487 (636)
Q Consensus 417 krVaIqGfGNVG~~aAe~L~e~---------GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~ 487 (636)
.+|.|.|+|+||+..++.|.+. +.+|++|+|++ ...+.+++. ..
T Consensus 4 irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~--~~~~~~~~~-------------------------~~ 56 (332)
T 2ejw_A 4 LKIALLGGGTVGSAFYNLVLERAEELSAFGVVPRFLGVLVRD--PRKPRAIPQ-------------------------EL 56 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTGGGGGGGTEEEEEEEEECSC--TTSCCSSCG-------------------------GG
T ss_pred eEEEEEcCCHHHHHHHHHHHhChhhHhhcCCCEEEEEEEECC--HHHhhccCc-------------------------cc
Confidence 5799999999999999999875 57999999984 112233321 01
Q ss_pred ee-CCCCccccccceEecCCCcCccchhhHHHhhhcCceEEE
Q 006671 488 YY-DEAKPWNERCDVAFPCASQNEIDQSDAINLVNSGCRILV 528 (636)
Q Consensus 488 ~i-~~~eil~~~cDIliPcA~~n~It~enA~~l~~~~akiVv 528 (636)
+. +.++++ ++||++-|+.......+.+.+.++.|..+|+
T Consensus 57 ~~~d~~~ll--~iDvVve~t~~~~~a~~~~~~AL~aGKhVVt 96 (332)
T 2ejw_A 57 LRAEPFDLL--EADLVVEAMGGVEAPLRLVLPALEAGIPLIT 96 (332)
T ss_dssp EESSCCCCT--TCSEEEECCCCSHHHHHHHHHHHHTTCCEEE
T ss_pred ccCCHHHHh--CCCEEEECCCCcHHHHHHHHHHHHcCCeEEE
Confidence 12 335566 8999999987655556677667788999998
No 63
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=95.99 E-value=0.03 Score=58.79 Aligned_cols=103 Identities=15% Similarity=0.204 Sum_probs=63.1
Q ss_pred cEEEEecCccHHHHHHHHHHH-CCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCcccccc------ccCC--ce
Q 006671 417 LRCVVSGSGKIAMHVLEKLIA-YGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSK------TYAR--SK 487 (636)
Q Consensus 417 krVaIqGfGNVG~~aAe~L~e-~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~------~~p~--a~ 487 (636)
.||+|.|||.+|+.+++.|.+ .+..||+|.|.. .|.+.+..|.++....+.+..... .+.+ .+
T Consensus 4 ikVgI~G~G~iGr~~~R~l~~~~~vevvaI~d~~--------~~~~~~a~l~~~ds~~g~~~~~~~~~~~~l~v~g~~i~ 75 (335)
T 1u8f_O 4 VKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPF--------IDLNYMVYMFQYDSTHGKFHGTVKAENGKLVINGNPIT 75 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSEEEEEECSS--------SCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEE
T ss_pred eEEEEEccCHHHHHHHHHHHcCCCcEEEEecCCC--------CCHHHHHHHhhcccccCCCCCceEEcCCeEEECCeEEE
Confidence 489999999999999999876 468999999830 144554444433222233221100 0001 11
Q ss_pred ee---CCCCc-c-ccccceEecCCCcCccchhhHHHhhhcCceEEE
Q 006671 488 YY---DEAKP-W-NERCDVAFPCASQNEIDQSDAINLVNSGCRILV 528 (636)
Q Consensus 488 ~i---~~~ei-l-~~~cDIliPcA~~n~It~enA~~l~~~~akiVv 528 (636)
.+ +++++ | +.+||+++.|+. ...+.+.|...++.|||.|.
T Consensus 76 v~~~~d~~~l~~~~~~vDvV~eatg-~~~~~e~a~~~l~aGak~V~ 120 (335)
T 1u8f_O 76 IFQERDPSKIKWGDAGAEYVVESTG-VFTTMEKAGAHLQGGAKRVI 120 (335)
T ss_dssp EECCSSGGGCCTTTTTCCEEEECSS-SCCSHHHHGGGGGGTCSEEE
T ss_pred EEecCCHHHCccccCCCCEEEECCC-chhhHHHHHHHHhCCCeEEE
Confidence 12 22333 6 358999999874 55677888888888865544
No 64
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=95.94 E-value=0.1 Score=54.63 Aligned_cols=111 Identities=16% Similarity=0.192 Sum_probs=67.2
Q ss_pred CCCCCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeC
Q 006671 411 NKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD 490 (636)
Q Consensus 411 g~~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~ 490 (636)
+.++.|++|.|.|+|++|+.+|+.|...|.+|+ +.|.+ ++-. . +....+
T Consensus 159 ~~~l~g~~vgIIG~G~iG~~vA~~l~~~G~~V~-~~dr~-----~~~~------------------~-------g~~~~~ 207 (333)
T 3ba1_A 159 TTKFSGKRVGIIGLGRIGLAVAERAEAFDCPIS-YFSRS-----KKPN------------------T-------NYTYYG 207 (333)
T ss_dssp CCCCTTCCEEEECCSHHHHHHHHHHHTTTCCEE-EECSS-----CCTT------------------C-------CSEEES
T ss_pred ccccCCCEEEEECCCHHHHHHHHHHHHCCCEEE-EECCC-----chhc------------------c-------CceecC
Confidence 457999999999999999999999999999964 44542 1100 0 011111
Q ss_pred C-CCccccccceEecCCC-----cCccchhhHHHhhhcCceEEEeCCCCC-CCH-HHHHHHHHCCce-Eecccc
Q 006671 491 E-AKPWNERCDVAFPCAS-----QNEIDQSDAINLVNSGCRILVEGSNMP-CTP-EAVDVLKKANVL-IAPAMA 555 (636)
Q Consensus 491 ~-~eil~~~cDIliPcA~-----~n~It~enA~~l~~~~akiVvEgAN~P-~T~-eA~~iL~~rGIl-viPD~~ 555 (636)
. ++++ .+|||++-|.. .+.|+.+....+ +.++ +|+--+.++ ++. +..+.|.+.+|. ..-|+.
T Consensus 208 ~l~ell-~~aDvVil~vP~~~~t~~li~~~~l~~m-k~ga-ilIn~srG~~vd~~aL~~aL~~g~i~ga~lDv~ 278 (333)
T 3ba1_A 208 SVVELA-SNSDILVVACPLTPETTHIINREVIDAL-GPKG-VLINIGRGPHVDEPELVSALVEGRLGGAGLDVF 278 (333)
T ss_dssp CHHHHH-HTCSEEEECSCCCGGGTTCBCHHHHHHH-CTTC-EEEECSCGGGBCHHHHHHHHHHTSSCEEEESCC
T ss_pred CHHHHH-hcCCEEEEecCCChHHHHHhhHHHHhcC-CCCC-EEEECCCCchhCHHHHHHHHHcCCCeEEEEecC
Confidence 1 1112 37899987765 355655544444 3345 455666666 333 445777777664 334444
No 65
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=95.93 E-value=0.015 Score=59.95 Aligned_cols=110 Identities=15% Similarity=0.200 Sum_probs=74.1
Q ss_pred cEEEEecC-ccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeCC-CCc
Q 006671 417 LRCVVSGS-GKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE-AKP 494 (636)
Q Consensus 417 krVaIqGf-GNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~~-~ei 494 (636)
.||.|+|+ |.+|..-++.|.+.+.++++|+|. +++- .. +.+.+++.+.+++ +++
T Consensus 4 irvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~-----~~~~---~~----------------~~~~~~~~~~~~~~~~l 59 (318)
T 3oa2_A 4 KNFALIGAAGYIAPRHMRAIKDTGNCLVSAYDI-----NDSV---GI----------------IDSISPQSEFFTEFEFF 59 (318)
T ss_dssp CEEEEETTTSSSHHHHHHHHHHTTCEEEEEECS-----SCCC---GG----------------GGGTCTTCEEESSHHHH
T ss_pred eEEEEECCCcHHHHHHHHHHHhCCCEEEEEEcC-----CHHH---HH----------------HHhhCCCCcEECCHHHH
Confidence 58999999 789999999998899999999997 3321 00 1112344444433 344
Q ss_pred c----------ccccceEecCCCcCccchhhHHHhhhcCceEEEeCCCCCCCHHHHHHH---HHCCceEe
Q 006671 495 W----------NERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVL---KKANVLIA 551 (636)
Q Consensus 495 l----------~~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~~iL---~~rGIlvi 551 (636)
+ +.++|+++=|. .+..+.+.+...++.|..++||=-=.....|+++++ +++|+.+.
T Consensus 60 l~~~~~l~~~~~~~vD~V~I~t-P~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~ 128 (318)
T 3oa2_A 60 LDHASNLKRDSATALDYVSICS-PNYLHYPHIAAGLRLGCDVICEKPLVPTPEMLDQLAVIERETDKRLY 128 (318)
T ss_dssp HHHHHHHTTSTTTSCCEEEECS-CGGGHHHHHHHHHHTTCEEEECSSCCSCHHHHHHHHHHHHHHTCCEE
T ss_pred HHhhhhhhhccCCCCcEEEECC-CcHHHHHHHHHHHHCCCeEEEECCCcCCHHHHHHHHHHHHHhCCEEE
Confidence 4 46799998665 567788888888899999999952111234454433 56676554
No 66
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=95.93 E-value=0.016 Score=59.67 Aligned_cols=110 Identities=15% Similarity=0.158 Sum_probs=74.6
Q ss_pred cEEEEecC-ccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeCC-CCc
Q 006671 417 LRCVVSGS-GKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE-AKP 494 (636)
Q Consensus 417 krVaIqGf-GNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~~-~ei 494 (636)
.||+|+|+ |.+|..-++.|.+.+.++|+|+|. +++- .. +.+.+++.+..++ +++
T Consensus 4 irvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~-----~~~~---~~----------------~~~~~~~~~~~~~~~~l 59 (312)
T 3o9z_A 4 TRFALTGLAGYIAPRHLKAIKEVGGVLVASLDP-----ATNV---GL----------------VDSFFPEAEFFTEPEAF 59 (312)
T ss_dssp CEEEEECTTSSSHHHHHHHHHHTTCEEEEEECS-----SCCC---GG----------------GGGTCTTCEEESCHHHH
T ss_pred eEEEEECCChHHHHHHHHHHHhCCCEEEEEEcC-----CHHH---HH----------------HHhhCCCCceeCCHHHH
Confidence 58999999 789999999999999999999997 3331 00 1112344444433 344
Q ss_pred c---------ccccceEecCCCcCccchhhHHHhhhcCceEEEeCCCCCCCHHHHHHH---HHCCceEe
Q 006671 495 W---------NERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVL---KKANVLIA 551 (636)
Q Consensus 495 l---------~~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~~iL---~~rGIlvi 551 (636)
+ +.++|+++=|+ .+..+.+-+...++.|..++||=-=.....|+++++ +++|+.+.
T Consensus 60 l~~~~~l~~~~~~vD~V~I~t-P~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~ 127 (312)
T 3o9z_A 60 EAYLEDLRDRGEGVDYLSIAS-PNHLHYPQIRMALRLGANALSEKPLVLWPEEIARLKELEARTGRRVY 127 (312)
T ss_dssp HHHHHHHHHTTCCCSEEEECS-CGGGHHHHHHHHHHTTCEEEECSSSCSCHHHHHHHHHHHHHHCCCEE
T ss_pred HHHhhhhcccCCCCcEEEECC-CchhhHHHHHHHHHCCCeEEEECCCCCCHHHHHHHHHHHHHcCCEEE
Confidence 4 45789998766 456788888888899999999952122234555443 56777553
No 67
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=95.91 E-value=0.15 Score=55.36 Aligned_cols=155 Identities=15% Similarity=0.120 Sum_probs=86.3
Q ss_pred CCCCCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeC
Q 006671 411 NKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD 490 (636)
Q Consensus 411 g~~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~ 490 (636)
+.++.|+|+.|.|+|++|+.+|+.|...|.+|++ .|.+.. .. . .++....
T Consensus 151 ~~el~gktvGIIGlG~IG~~vA~~l~~~G~~V~~-yd~~~~------~~----------------~-------~~~~~~~ 200 (416)
T 3k5p_A 151 SREVRGKTLGIVGYGNIGSQVGNLAESLGMTVRY-YDTSDK------LQ----------------Y-------GNVKPAA 200 (416)
T ss_dssp CCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEE-ECTTCC------CC----------------B-------TTBEECS
T ss_pred CccCCCCEEEEEeeCHHHHHHHHHHHHCCCEEEE-ECCcch------hc----------------c-------cCcEecC
Confidence 3579999999999999999999999999999754 343110 00 0 0111111
Q ss_pred -CCCccccccceEecCCC-----cCccchhhHHHhhhcCceEEEeCCCCC-CCHHH-HHHHHHCCce-Eecccccccccc
Q 006671 491 -EAKPWNERCDVAFPCAS-----QNEIDQSDAINLVNSGCRILVEGSNMP-CTPEA-VDVLKKANVL-IAPAMAAGAGGV 561 (636)
Q Consensus 491 -~~eil~~~cDIliPcA~-----~n~It~enA~~l~~~~akiVvEgAN~P-~T~eA-~~iL~~rGIl-viPD~~aNAGGV 561 (636)
-++++ ..|||++-|.. .+.|+.+....+ +.+ .+++--|-++ +..+| .+.|++..|. .+=|...+=--.
T Consensus 201 sl~ell-~~aDvV~lhvPlt~~T~~li~~~~l~~m-k~g-ailIN~aRG~vvd~~aL~~aL~~g~i~gAalDVf~~EP~~ 277 (416)
T 3k5p_A 201 SLDELL-KTSDVVSLHVPSSKSTSKLITEAKLRKM-KKG-AFLINNARGSDVDLEALAKVLQEGHLAGAAIDVFPVEPAS 277 (416)
T ss_dssp SHHHHH-HHCSEEEECCCC-----CCBCHHHHHHS-CTT-EEEEECSCTTSBCHHHHHHHHHTTSEEEEEECCCSSCCSS
T ss_pred CHHHHH-hhCCEEEEeCCCCHHHhhhcCHHHHhhC-CCC-cEEEECCCChhhhHHHHHHHHHcCCccEEEeCCCCCCCCC
Confidence 11222 37898876654 466766655555 223 4556677766 44444 4677766664 344443321100
Q ss_pred e----eecc---hhccccCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 006671 562 V----AGEL---ELNQECNMVHWSPEDFESKLQEAMKQTYQRAL 598 (636)
Q Consensus 562 i----vS~~---E~~qN~~~~~ws~eeV~~rL~~~m~~~~~~v~ 598 (636)
. .+-+ +-+==..|+.|+-+|..+++...+.+.+.+.+
T Consensus 278 ~~~~~~~pL~~~~nvilTPHig~~T~ea~~~~~~~~~~nl~~~l 321 (416)
T 3k5p_A 278 NGERFSTPLQGLENVILTPHIGGSTEEAQERIGTEVTRKLVEYS 321 (416)
T ss_dssp TTSCCCCTTTTCTTEEECCSCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred cccccchhHhcCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 0 0111 11112456777777777766554444444443
No 68
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=95.91 E-value=0.031 Score=58.45 Aligned_cols=107 Identities=17% Similarity=0.195 Sum_probs=65.0
Q ss_pred CCCCCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeC
Q 006671 411 NKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD 490 (636)
Q Consensus 411 g~~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~ 490 (636)
+.++.|+||.|.|+|++|+.+|+.|...|++|++ .|.+.. +. + .++ +++.+
T Consensus 140 ~~~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~-~d~~~~---~~-~------------------~~~------~~~~~ 190 (333)
T 1dxy_A 140 GKELGQQTVGVMGTGHIGQVAIKLFKGFGAKVIA-YDPYPM---KG-D------------------HPD------FDYVS 190 (333)
T ss_dssp CCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEE-ECSSCC---SS-C------------------CTT------CEECC
T ss_pred ccCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEE-ECCCcc---hh-h------------------Hhc------cccCC
Confidence 4679999999999999999999999999999754 343110 00 0 000 11111
Q ss_pred CCCccccccceEecCCCc-----CccchhhHHHhhhcCceEEEeCCCCC-CCHHH-HHHHHHCCce
Q 006671 491 EAKPWNERCDVAFPCASQ-----NEIDQSDAINLVNSGCRILVEGSNMP-CTPEA-VDVLKKANVL 549 (636)
Q Consensus 491 ~~eil~~~cDIliPcA~~-----n~It~enA~~l~~~~akiVvEgAN~P-~T~eA-~~iL~~rGIl 549 (636)
-++++ ..|||++-|..- +.|+.+....+ +.++-+| .-+-++ ++.+| .+.|++.+|.
T Consensus 191 l~ell-~~aDvV~~~~P~~~~t~~li~~~~l~~m-k~ga~lI-n~srg~~vd~~aL~~aL~~g~i~ 253 (333)
T 1dxy_A 191 LEDLF-KQSDVIDLHVPGIEQNTHIINEAAFNLM-KPGAIVI-NTARPNLIDTQAMLSNLKSGKLA 253 (333)
T ss_dssp HHHHH-HHCSEEEECCCCCGGGTTSBCHHHHHHS-CTTEEEE-ECSCTTSBCHHHHHHHHHTTSEE
T ss_pred HHHHH-hcCCEEEEcCCCchhHHHHhCHHHHhhC-CCCcEEE-ECCCCcccCHHHHHHHHHhCCcc
Confidence 11222 378999887653 45665544444 3455454 444444 55554 4677777665
No 69
>1obf_O Glyceraldehyde 3-phosphate dehydrogenase; glycolytic pathway, oxidoreductase, free-NAD GAPDH; HET: PG4; 1.7A {Achromobacter xylosoxidans} SCOP: c.2.1.3 d.81.1.1 PDB: 3gnq_A*
Probab=95.89 E-value=0.017 Score=60.95 Aligned_cols=102 Identities=17% Similarity=0.285 Sum_probs=65.8
Q ss_pred cEEEEecCccHHHHHHHHHHHC----CCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccc------cCC-
Q 006671 417 LRCVVSGSGKIAMHVLEKLIAY----GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKT------YAR- 485 (636)
Q Consensus 417 krVaIqGfGNVG~~aAe~L~e~----GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~------~p~- 485 (636)
.||+|-|||-+|+.+++.|.+. ...||+|.|. .|.+.+..|+++....|++..-.+. +.+
T Consensus 2 ikVaInGfGrIGr~v~r~l~~~~~~~~~evvaInd~---------~~~~~~a~ll~ydS~hg~f~~~v~~~~~~l~v~g~ 72 (335)
T 1obf_O 2 IRVAINGYGRIGRNILRAHYEGGKSHDIEIVAINDL---------GDPKTNAHLTRYDTAHGKFPGTVSVNGSYMVVNGD 72 (335)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTSCSSEEEEEEECS---------SCHHHHHHHHHEETTTEECSSCEEEETTEEEETTE
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCCcEEEEEeCC---------CCHHHHHHHhccCCcCCCCCCCEEEeCCEEEECCE
Confidence 4799999999999999999887 5789999994 3555554455443333322211000 111
Q ss_pred -ceeeC---CCC-ccc-cccceEecCCCcCccchhhHHHhhhcCce-EEE
Q 006671 486 -SKYYD---EAK-PWN-ERCDVAFPCASQNEIDQSDAINLVNSGCR-ILV 528 (636)
Q Consensus 486 -a~~i~---~~e-il~-~~cDIliPcA~~n~It~enA~~l~~~~ak-iVv 528 (636)
.+... +++ .|. ..+||++.|+ +..++.+.|+..++.||| +|+
T Consensus 73 ~i~v~~~~dp~~~~w~~~gvDiV~est-G~f~s~e~a~~h~~aGakkVvi 121 (335)
T 1obf_O 73 KIRVDANRNPAQLPWGALKVDVVLECT-GFFTTKEKAGAHIKGGAKKVII 121 (335)
T ss_dssp EEEEECCSCGGGSCTTTTTCSEEEECS-SSCCSHHHHHHHHHHTCSEEEE
T ss_pred EEEEEEcCCcccCCccccCCCEEEEcc-CccccHHHHHHHHHcCCCEEEE
Confidence 11121 112 363 6899999987 566788888888888986 554
No 70
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=95.88 E-value=0.016 Score=59.69 Aligned_cols=111 Identities=13% Similarity=0.071 Sum_probs=72.0
Q ss_pred cEEEEecCccHHHHHHHHHHHC-CCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeC-CCCc
Q 006671 417 LRCVVSGSGKIAMHVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD-EAKP 494 (636)
Q Consensus 417 krVaIqGfGNVG~~aAe~L~e~-GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~-~~ei 494 (636)
.||.|+|+|++|...++.|.+. +..+++|+|. |.+.+..+ .+..+ ....+ .+++
T Consensus 5 ~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~----------~~~~~~~~---a~~~g-----------~~~~~~~~~~ 60 (344)
T 3euw_A 5 LRIALFGAGRIGHVHAANIAANPDLELVVIADP----------FIEGAQRL---AEANG-----------AEAVASPDEV 60 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECS----------SHHHHHHH---HHTTT-----------CEEESSHHHH
T ss_pred eEEEEECCcHHHHHHHHHHHhCCCcEEEEEECC----------CHHHHHHH---HHHcC-----------CceeCCHHHH
Confidence 5899999999999999998886 7899999997 33332211 11111 22222 2344
Q ss_pred cc-cccceEecCCCcCccchhhHHHhhhcCceEEEeCCCCCCC-HHHHH---HHHHCCceEecc
Q 006671 495 WN-ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCT-PEAVD---VLKKANVLIAPA 553 (636)
Q Consensus 495 l~-~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T-~eA~~---iL~~rGIlviPD 553 (636)
+. .++|+++-|. .+..+.+.+...++.|..+++|-- +-+| .++.+ ..+++|+.+...
T Consensus 61 l~~~~~D~V~i~t-p~~~h~~~~~~al~~gk~v~~EKP-~~~~~~~~~~l~~~a~~~g~~~~v~ 122 (344)
T 3euw_A 61 FARDDIDGIVIGS-PTSTHVDLITRAVERGIPALCEKP-IDLDIEMVRACKEKIGDGASKVMLG 122 (344)
T ss_dssp TTCSCCCEEEECS-CGGGHHHHHHHHHHTTCCEEECSC-SCSCHHHHHHHHHHHGGGGGGEEEC
T ss_pred hcCCCCCEEEEeC-CchhhHHHHHHHHHcCCcEEEECC-CCCCHHHHHHHHHHHHhcCCeEEec
Confidence 43 5789999876 456677778888888999999952 1133 34443 335667665543
No 71
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=95.87 E-value=0.009 Score=61.68 Aligned_cols=113 Identities=20% Similarity=0.233 Sum_probs=71.2
Q ss_pred cEEEEecCccHHHHHHHHHHHC-CCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceee-CCCCc
Q 006671 417 LRCVVSGSGKIAMHVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYY-DEAKP 494 (636)
Q Consensus 417 krVaIqGfGNVG~~aAe~L~e~-GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i-~~~ei 494 (636)
.||.|+|+|++|...++.|.+. +..+++|+|. |.+.+..+. +..+ ..... +.+++
T Consensus 3 ~rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d~----------~~~~~~~~~---~~~~----------~~~~~~~~~~l 59 (344)
T 3ezy_A 3 LRIGVIGLGRIGTIHAENLKMIDDAILYAISDV----------REDRLREMK---EKLG----------VEKAYKDPHEL 59 (344)
T ss_dssp EEEEEECCSHHHHHHHHHGGGSTTEEEEEEECS----------CHHHHHHHH---HHHT----------CSEEESSHHHH
T ss_pred eEEEEEcCCHHHHHHHHHHHhCCCcEEEEEECC----------CHHHHHHHH---HHhC----------CCceeCCHHHH
Confidence 5899999999999999888774 7899999997 333332221 1111 11112 22344
Q ss_pred cc-cccceEecCCCcCccchhhHHHhhhcCceEEEeCCCCCCCHHHH---HHHHHCCceEecc
Q 006671 495 WN-ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAV---DVLKKANVLIAPA 553 (636)
Q Consensus 495 l~-~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~---~iL~~rGIlviPD 553 (636)
+. .++|+++-|. .+..+.+.+...++.+..+++|--=.....++. +..+++|+.+...
T Consensus 60 l~~~~~D~V~i~t-p~~~h~~~~~~al~~gk~v~~EKP~~~~~~e~~~l~~~a~~~g~~~~v~ 121 (344)
T 3ezy_A 60 IEDPNVDAVLVCS-STNTHSELVIACAKAKKHVFCEKPLSLNLADVDRMIEETKKADVILFTG 121 (344)
T ss_dssp HHCTTCCEEEECS-CGGGHHHHHHHHHHTTCEEEEESCSCSCHHHHHHHHHHHHHHTCCEEEE
T ss_pred hcCCCCCEEEEcC-CCcchHHHHHHHHhcCCeEEEECCCCCCHHHHHHHHHHHHHhCCcEEEe
Confidence 43 4799999776 455677777777888999999951111122333 3445677766543
No 72
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=95.87 E-value=0.037 Score=56.18 Aligned_cols=109 Identities=11% Similarity=0.044 Sum_probs=63.8
Q ss_pred CcEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCcee-e-CCCC
Q 006671 416 GLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKY-Y-DEAK 493 (636)
Q Consensus 416 GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~-i-~~~e 493 (636)
.++|.|.|+|++|..+|+.|.+.|..| .+.|. +.++++.+. +. + ... . +..+
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V-~~~dr----------~~~~~~~~~---~~-g-----------~~~~~~~~~e 60 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLST-WGADL----------NPQACANLL---AE-G-----------ACGAAASARE 60 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEE-EEECS----------CHHHHHHHH---HT-T-----------CSEEESSSTT
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeE-EEEEC----------CHHHHHHHH---Hc-C-----------CccccCCHHH
Confidence 468999999999999999999999985 45565 334433222 11 1 111 1 2223
Q ss_pred ccccccceEecCCCcCccchhhH---HHhh---hcCceEEEeCCCC-CC-CHHHHHHHHHCCceEec
Q 006671 494 PWNERCDVAFPCASQNEIDQSDA---INLV---NSGCRILVEGSNM-PC-TPEAVDVLKKANVLIAP 552 (636)
Q Consensus 494 il~~~cDIliPcA~~n~It~enA---~~l~---~~~akiVvEgAN~-P~-T~eA~~iL~~rGIlviP 552 (636)
.. .+|||+|-|........+.. ..|. ..++ +|+..++. |. +.+..+.+.++|+.|+.
T Consensus 61 ~~-~~aDvvi~~vp~~~~~~~v~~~~~~l~~~l~~g~-ivv~~st~~~~~~~~~~~~~~~~g~~~~~ 125 (303)
T 3g0o_A 61 FA-GVVDALVILVVNAAQVRQVLFGEDGVAHLMKPGS-AVMVSSTISSADAQEIAAALTALNLNMLD 125 (303)
T ss_dssp TT-TTCSEEEECCSSHHHHHHHHC--CCCGGGSCTTC-EEEECSCCCHHHHHHHHHHHHTTTCEEEE
T ss_pred HH-hcCCEEEEECCCHHHHHHHHhChhhHHhhCCCCC-EEEecCCCCHHHHHHHHHHHHHcCCeEEe
Confidence 32 37999999887643222221 2221 2244 45555543 32 33445677888988764
No 73
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=95.84 E-value=0.022 Score=60.22 Aligned_cols=111 Identities=12% Similarity=0.143 Sum_probs=68.4
Q ss_pred CCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeCC-C
Q 006671 414 LKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE-A 492 (636)
Q Consensus 414 l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~~-~ 492 (636)
++.++|.|+|+|++|..+|+.|.+.|..| .+.|. +.+++..+. +. + +...+. +
T Consensus 20 m~~mkIgiIGlG~mG~~~A~~L~~~G~~V-~v~dr----------~~~~~~~l~---~~-g-----------~~~~~s~~ 73 (358)
T 4e21_A 20 FQSMQIGMIGLGRMGADMVRRLRKGGHEC-VVYDL----------NVNAVQALE---RE-G-----------IAGARSIE 73 (358)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEE-EEECS----------CHHHHHHHH---TT-T-----------CBCCSSHH
T ss_pred hcCCEEEEECchHHHHHHHHHHHhCCCEE-EEEeC----------CHHHHHHHH---HC-C-----------CEEeCCHH
Confidence 45689999999999999999999999985 55565 333332221 11 1 111111 1
Q ss_pred Ccccccc---ceEecCCCcCccchhhHHHhhh--cCceEEEeCCCCC--CCHHHHHHHHHCCceEec
Q 006671 493 KPWNERC---DVAFPCASQNEIDQSDAINLVN--SGCRILVEGSNMP--CTPEAVDVLKKANVLIAP 552 (636)
Q Consensus 493 eil~~~c---DIliPcA~~n~It~enA~~l~~--~~akiVvEgAN~P--~T~eA~~iL~~rGIlviP 552 (636)
++. ..| ||+|-|-... ...+.+..|.. ..-.+|+..+|.+ .+.+..+.+.++|+.|+.
T Consensus 74 e~~-~~a~~~DvVi~~vp~~-~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~vd 138 (358)
T 4e21_A 74 EFC-AKLVKPRVVWLMVPAA-VVDSMLQRMTPLLAANDIVIDGGNSHYQDDIRRADQMRAQGITYVD 138 (358)
T ss_dssp HHH-HHSCSSCEEEECSCGG-GHHHHHHHHGGGCCTTCEEEECSSCCHHHHHHHHHHHHTTTCEEEE
T ss_pred HHH-hcCCCCCEEEEeCCHH-HHHHHHHHHHhhCCCCCEEEeCCCCChHHHHHHHHHHHHCCCEEEe
Confidence 111 245 9999888766 33444444432 1235777788765 345556788999998875
No 74
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=95.82 E-value=0.017 Score=56.63 Aligned_cols=101 Identities=20% Similarity=0.211 Sum_probs=69.3
Q ss_pred cEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeCCCCccc
Q 006671 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKPWN 496 (636)
Q Consensus 417 krVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~~~eil~ 496 (636)
.||.|.|+|++|+..++.|.+.|..++++.|++. . .+ + .| . +.++++.
T Consensus 1 m~vgiIG~G~mG~~~~~~l~~~g~~lv~v~d~~~-----~-~~--~---------------~~----~-----~~~~l~~ 48 (236)
T 2dc1_A 1 MLVGLIGYGAIGKFLAEWLERNGFEIAAILDVRG-----E-HE--K---------------MV----R-----GIDEFLQ 48 (236)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSC-----C-CT--T---------------EE----S-----SHHHHTT
T ss_pred CEEEEECCCHHHHHHHHHHhcCCCEEEEEEecCc-----c-hh--h---------------hc----C-----CHHHHhc
Confidence 3799999999999999999889999999999732 1 00 0 00 0 1112232
Q ss_pred cccceEecCCCcCccchhhHHHhhhcCceEEEeCCCCCCCHHH----HHHHHHCCceE
Q 006671 497 ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEA----VDVLKKANVLI 550 (636)
Q Consensus 497 ~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA----~~iL~~rGIlv 550 (636)
.++|+++-|.... .+.+.+...++.|+.+|+|..-.+..+++ .+..+++|+.+
T Consensus 49 ~~~DvVv~~~~~~-~~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~~l~~~a~~~g~~~ 105 (236)
T 2dc1_A 49 REMDVAVEAASQQ-AVKDYAEKILKAGIDLIVLSTGAFADRDFLSRVREVCRKTGRRV 105 (236)
T ss_dssp SCCSEEEECSCHH-HHHHHHHHHHHTTCEEEESCGGGGGSHHHHHHHHHHHHHHCCCE
T ss_pred CCCCEEEECCCHH-HHHHHHHHHHHCCCcEEEECcccCChHHHHHHHHHHHHhcCCeE
Confidence 4789999998644 67777777778899999996544344544 34456678763
No 75
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=95.81 E-value=0.017 Score=59.80 Aligned_cols=52 Identities=25% Similarity=0.403 Sum_probs=44.5
Q ss_pred CCcchhHHHHHHHHHHHHhCCCCCCcEEEEecCcc-HHHHHHHHHHHCCCEEEEEeCC
Q 006671 392 TEATGYGLVFFAQLILADMNKELKGLRCVVSGSGK-IAMHVLEKLIAYGAIPVSVSDA 448 (636)
Q Consensus 392 ~eATG~GV~~~~~~~l~~~g~~l~GkrVaIqGfGN-VG~~aAe~L~e~GAkVVaVSDs 448 (636)
...|.+|++. +|++.+.+++|++|+|.|.|+ ||..+|..|...||+ |+|+++
T Consensus 141 ~PcTp~gv~~----lL~~~~i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAt-Vtv~hs 193 (286)
T 4a5o_A 141 RPCTPKGIMT----LLASTGADLYGMDAVVVGASNIVGRPMALELLLGGCT-VTVTHR 193 (286)
T ss_dssp CCHHHHHHHH----HHHHTTCCCTTCEEEEECTTSTTHHHHHHHHHHTTCE-EEEECT
T ss_pred CCCCHHHHHH----HHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCe-EEEEeC
Confidence 4689998754 566678999999999999877 999999999999998 677776
No 76
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=95.80 E-value=0.13 Score=53.33 Aligned_cols=110 Identities=13% Similarity=0.122 Sum_probs=65.3
Q ss_pred CCCCCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceee-
Q 006671 411 NKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYY- 489 (636)
Q Consensus 411 g~~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i- 489 (636)
+.++.|++|.|.|+|++|+.+|+.|...|++|+++ |.+ +. +.+. ..+ + ++++.
T Consensus 141 ~~~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~-d~~------~~-~~~~---~~~----------~-----g~~~~~ 194 (320)
T 1gdh_A 141 GEKLDNKTLGIYGFGSIGQALAKRAQGFDMDIDYF-DTH------RA-SSSD---EAS----------Y-----QATFHD 194 (320)
T ss_dssp BCCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEE-CSS------CC-CHHH---HHH----------H-----TCEECS
T ss_pred CcCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEE-CCC------Cc-Chhh---hhh----------c-----CcEEcC
Confidence 35789999999999999999999999999997543 320 21 1111 000 0 22222
Q ss_pred CCCCccccccceEecCCC-----cCccchhhHHHhhhcCceEEEeCCCCC-CCHHH-HHHHHHCCce
Q 006671 490 DEAKPWNERCDVAFPCAS-----QNEIDQSDAINLVNSGCRILVEGSNMP-CTPEA-VDVLKKANVL 549 (636)
Q Consensus 490 ~~~eil~~~cDIliPcA~-----~n~It~enA~~l~~~~akiVvEgAN~P-~T~eA-~~iL~~rGIl 549 (636)
+.++++ ..|||++-|.. .+.|+.+....+ +.++ +|+.-+.++ ++.++ .+.|.+.+|.
T Consensus 195 ~l~ell-~~aDvVil~~p~~~~t~~~i~~~~l~~m-k~ga-ilIn~arg~~vd~~aL~~aL~~g~i~ 258 (320)
T 1gdh_A 195 SLDSLL-SVSQFFSLNAPSTPETRYFFNKATIKSL-PQGA-IVVNTARGDLVDNELVVAALEAGRLA 258 (320)
T ss_dssp SHHHHH-HHCSEEEECCCCCTTTTTCBSHHHHTTS-CTTE-EEEECSCGGGBCHHHHHHHHHHTSEE
T ss_pred CHHHHH-hhCCEEEEeccCchHHHhhcCHHHHhhC-CCCc-EEEECCCCcccCHHHHHHHHHhCCCc
Confidence 112222 37899988765 345554443333 3344 455555555 45444 5778777665
No 77
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=95.80 E-value=0.018 Score=58.65 Aligned_cols=109 Identities=18% Similarity=0.257 Sum_probs=68.2
Q ss_pred cEEEEecCccHHHHH-HHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeC-CCCc
Q 006671 417 LRCVVSGSGKIAMHV-LEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD-EAKP 494 (636)
Q Consensus 417 krVaIqGfGNVG~~a-Ae~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~-~~ei 494 (636)
.||.|+|+|++|... ++.|.+.+..+++|+|. |.+.+..+ .+..+ + ....+ .+++
T Consensus 1 ~~vgiiG~G~~g~~~~~~~l~~~~~~~vav~d~----------~~~~~~~~---~~~~g-~---------~~~~~~~~~~ 57 (332)
T 2glx_A 1 NRWGLIGASTIAREWVIGAIRATGGEVVSMMST----------SAERGAAY---ATENG-I---------GKSVTSVEEL 57 (332)
T ss_dssp CEEEEESCCHHHHHTHHHHHHHTTCEEEEEECS----------CHHHHHHH---HHHTT-C---------SCCBSCHHHH
T ss_pred CeEEEEcccHHHHHhhhHHhhcCCCeEEEEECC----------CHHHHHHH---HHHcC-C---------CcccCCHHHH
Confidence 379999999999987 77777788999999997 33333212 11111 1 01111 1234
Q ss_pred cc-cccceEecCCCcCccchhhHHHhhhcCceEEEeCCCCCC--CH-HHHH---HHHHCCceEec
Q 006671 495 WN-ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPC--TP-EAVD---VLKKANVLIAP 552 (636)
Q Consensus 495 l~-~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgAN~P~--T~-eA~~---iL~~rGIlviP 552 (636)
+. .++|+++-|.. +..+.+.+...++.|..+++|- |+ |. ++.+ ..+++|+.+..
T Consensus 58 l~~~~~D~V~i~tp-~~~h~~~~~~al~~Gk~v~~ek---P~~~~~~~~~~l~~~a~~~g~~~~~ 118 (332)
T 2glx_A 58 VGDPDVDAVYVSTT-NELHREQTLAAIRAGKHVLCEK---PLAMTLEDAREMVVAAREAGVVLGT 118 (332)
T ss_dssp HTCTTCCEEEECSC-GGGHHHHHHHHHHTTCEEEECS---SSCSSHHHHHHHHHHHHHHTCCEEE
T ss_pred hcCCCCCEEEEeCC-hhHhHHHHHHHHHCCCeEEEeC---CCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 43 36899998775 5556777777778898899974 42 33 3333 33567776543
No 78
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=95.79 E-value=0.016 Score=60.01 Aligned_cols=110 Identities=15% Similarity=0.213 Sum_probs=71.4
Q ss_pred CcEEEEecCccHHHHHHHHHHHC--CCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeCC-C
Q 006671 416 GLRCVVSGSGKIAMHVLEKLIAY--GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE-A 492 (636)
Q Consensus 416 GkrVaIqGfGNVG~~aAe~L~e~--GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~~-~ 492 (636)
-.||.|+|+|++|...++.|.+. ++++++|+|. |.+.+..+ .+.. +....++ +
T Consensus 13 ~~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~----------~~~~~~~~---~~~~-----------~~~~~~~~~ 68 (354)
T 3q2i_A 13 KIRFALVGCGRIANNHFGALEKHADRAELIDVCDI----------DPAALKAA---VERT-----------GARGHASLT 68 (354)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECS----------SHHHHHHH---HHHH-----------CCEEESCHH
T ss_pred cceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcC----------CHHHHHHH---HHHc-----------CCceeCCHH
Confidence 36899999999999989988886 8899999997 33333222 1111 1222222 3
Q ss_pred Cccc-cccceEecCCCcCccchhhHHHhhhcCceEEEeCCCCCCCH-HHHH---HHHHCCceEe
Q 006671 493 KPWN-ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTP-EAVD---VLKKANVLIA 551 (636)
Q Consensus 493 eil~-~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~-eA~~---iL~~rGIlvi 551 (636)
+++. .++|+++-|.. +..+.+.+...++.|..+++|=- +-+|. ++.+ ..+++|+.+.
T Consensus 69 ~ll~~~~~D~V~i~tp-~~~h~~~~~~al~~gk~v~~EKP-~a~~~~~~~~l~~~a~~~g~~~~ 130 (354)
T 3q2i_A 69 DMLAQTDADIVILTTP-SGLHPTQSIECSEAGFHVMTEKP-MATRWEDGLEMVKAADKAKKHLF 130 (354)
T ss_dssp HHHHHCCCSEEEECSC-GGGHHHHHHHHHHTTCEEEECSS-SCSSHHHHHHHHHHHHHHTCCEE
T ss_pred HHhcCCCCCEEEECCC-cHHHHHHHHHHHHCCCCEEEeCC-CcCCHHHHHHHHHHHHHhCCeEE
Confidence 4553 47999997664 55677778777888999999852 11333 3433 3356676554
No 79
>1pj3_A NAD-dependent malic enzyme, mitochondrial; oxidative decarboxylase, oxidoreductase; HET: NAD; 2.10A {Homo sapiens} SCOP: c.2.1.7 c.58.1.3 PDB: 1pj2_A* 1do8_A* 1pj4_A* 1qr6_A* 1efl_A* 1pjl_A* 1efk_A* 1gz4_A* 1gz3_A*
Probab=95.79 E-value=0.03 Score=62.69 Aligned_cols=178 Identities=13% Similarity=0.126 Sum_probs=126.1
Q ss_pred CCHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCChhHHHHHHHHhhhhhCCCCccccCcccccCCCCCCCCcchhHHHH
Q 006671 322 KSDNEIMRFCQSFMNEIHRYLGPDKDLPSEEMGVGTREMGYLFGQYRRLAGHFQGSFTGPRIFWSGSSLRTEATGYGLVF 401 (636)
Q Consensus 322 ~S~~El~r~~r~f~~eL~~~IGp~~DVpA~DiGt~~rem~~m~~~y~~l~g~~~g~vTGKp~~~GGs~~r~eATG~GV~~ 401 (636)
.+.+|...|...||..+.+..||..-|-=+|++. ..--.+-+.|+.-- -++.. --.-||-=+..
T Consensus 206 v~g~eYd~fvdefv~av~~~fG~~~~I~~EDf~~--~~af~il~ryr~~i----pvFnD----------DiqGTa~V~lA 269 (564)
T 1pj3_A 206 DRTQQYDDLIDEFMKAITDRYGRNTLIQFEDFGN--HNAFRFLRKYREKY----CTFND----------DIQGTAAVALA 269 (564)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHCTTCEEEECSCCH--HHHHHHHHHHTTTS----SEEEH----------HHHHHHHHHHH
T ss_pred CchhhHHHHHHHHHHHHHHHcCCCcEEeehhcCC--ccHHHHHHHhccCC----CEeCC----------CCchHHHHHHH
Confidence 4567889999999999999999988888899864 45555677777511 11111 11235555566
Q ss_pred HHHHHHHHhCCCCCCcEEEEecCccHHHHHHHHHHH----CCC------EEEEEeCCCCceeCCC--CCCHHHHHHHHHH
Q 006671 402 FAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIA----YGA------IPVSVSDAKGYLVDED--GFDYMKISFLRDI 469 (636)
Q Consensus 402 ~~~~~l~~~g~~l~GkrVaIqGfGNVG~~aAe~L~e----~GA------kVVaVSDs~G~Iydpd--GLDve~L~~L~~~ 469 (636)
++-.+++-.|.+|+..||+|.|.|.-|..+|++|.. .|. +=+-+.|++|.|++.. +|+..+
T Consensus 270 gllnAlki~gk~l~d~riv~~GAGaAgigia~ll~~~m~~~Gl~~eeA~~~i~~~D~~Gli~~~r~~~l~~~k------- 342 (564)
T 1pj3_A 270 GLLAAQKVISKPISEHKILFLGAGEAALGIANLIVMSMVENGLSEQEAQKKIWMFDKYGLLVKGRKAKIDSYQ------- 342 (564)
T ss_dssp HHHHHHHHHCCCGGGCCEEEECCSHHHHHHHHHHHHHHHHTTCCHHHHHHTEEEEETTEECBTTCSSCCCTTT-------
T ss_pred HHHHHHHHhCCcHhHcEEEEeCCCHHHHHHHHHHHHHHHHcCCChHHhhCcEEEEeCCCeEECCCcccchHHH-------
Confidence 778888888999999999999999999999999986 784 4478999999999854 454322
Q ss_pred HhhcCCccccccccCCceeeCCCCcc----ccccceEecCCC-cCccchhhHHHhhh-cCceEEEeCCC
Q 006671 470 KSQQRSLRDYSKTYARSKYYDEAKPW----NERCDVAFPCAS-QNEIDQSDAINLVN-SGCRILVEGSN 532 (636)
Q Consensus 470 k~~~g~l~~y~~~~p~a~~i~~~eil----~~~cDIliPcA~-~n~It~enA~~l~~-~~akiVvEgAN 532 (636)
..|++.... .....+. .++.||||=++. .+.+|++-.+.+.+ +.-.||---||
T Consensus 343 -------~~~A~~~~~---~~~~~L~eav~~vkp~vlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLSN 401 (564)
T 1pj3_A 343 -------EPFTHSAPE---SIPDTFEDAVNILKPSTIIGVAGAGRLFTPDVIRAMASINERPVIFALSN 401 (564)
T ss_dssp -------GGGCBCCCS---SCCSSHHHHHHHHCCSEEEECCCSSCCSCHHHHHHHHHHCSSCEEEECCS
T ss_pred -------HHHHHhcCc---cccCCHHHHHhhcCCCEEEEeCCCCCCCCHHHHHHHHhcCCCCEEEECCC
Confidence 122111100 0011222 347999999996 69999999998843 34678887888
No 80
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=95.78 E-value=0.018 Score=59.09 Aligned_cols=111 Identities=14% Similarity=0.088 Sum_probs=71.9
Q ss_pred cEEEEecCccHHHHHHHHHHHC-CCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeCCCCcc
Q 006671 417 LRCVVSGSGKIAMHVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKPW 495 (636)
Q Consensus 417 krVaIqGfGNVG~~aAe~L~e~-GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~~~eil 495 (636)
.+|.|+|+|++|...++.|.+. +.++++|+|. |.+.+..+ .+.. +..+-+.++++
T Consensus 4 ~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~----------~~~~~~~~---~~~~-----------~~~~~~~~~~l 59 (331)
T 4hkt_A 4 VRFGLLGAGRIGKVHAKAVSGNADARLVAVADA----------FPAAAEAI---AGAY-----------GCEVRTIDAIE 59 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECS----------SHHHHHHH---HHHT-----------TCEECCHHHHH
T ss_pred eEEEEECCCHHHHHHHHHHhhCCCcEEEEEECC----------CHHHHHHH---HHHh-----------CCCcCCHHHHh
Confidence 5899999999999999999885 8899999997 33333222 1111 11211223444
Q ss_pred c-cccceEecCCCcCccchhhHHHhhhcCceEEEeCCCCCCC-HHHH---HHHHHCCceEecc
Q 006671 496 N-ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCT-PEAV---DVLKKANVLIAPA 553 (636)
Q Consensus 496 ~-~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T-~eA~---~iL~~rGIlviPD 553 (636)
. .++|+++-|. .+..+.+.+...++.+..+++|--=. +| .++. +..+++|+.+...
T Consensus 60 ~~~~~D~V~i~t-p~~~h~~~~~~al~~gk~v~~EKP~~-~~~~~~~~l~~~a~~~g~~~~v~ 120 (331)
T 4hkt_A 60 AAADIDAVVICT-PTDTHADLIERFARAGKAIFCEKPID-LDAERVRACLKVVSDTKAKLMVG 120 (331)
T ss_dssp HCTTCCEEEECS-CGGGHHHHHHHHHHTTCEEEECSCSC-SSHHHHHHHHHHHHHTTCCEEEC
T ss_pred cCCCCCEEEEeC-CchhHHHHHHHHHHcCCcEEEecCCC-CCHHHHHHHHHHHHHcCCeEEEc
Confidence 3 4789998776 55667777777788899999985211 23 3343 3446778766543
No 81
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=95.77 E-value=0.017 Score=59.46 Aligned_cols=113 Identities=12% Similarity=0.180 Sum_probs=71.4
Q ss_pred cEEEEecCccHHH-HHHHHHHHC-CCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeC-CCC
Q 006671 417 LRCVVSGSGKIAM-HVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD-EAK 493 (636)
Q Consensus 417 krVaIqGfGNVG~-~aAe~L~e~-GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~-~~e 493 (636)
.||.|+|+|++|+ +.+..|... +++|++|+|. |.+++..+ .++ |+-...++ -++
T Consensus 24 irigiIG~G~ig~~~~~~~~~~~~~~~lvav~d~----------~~~~a~~~---a~~----------~g~~~~y~d~~e 80 (350)
T 4had_A 24 LRFGIISTAKIGRDNVVPAIQDAENCVVTAIASR----------DLTRAREM---ADR----------FSVPHAFGSYEE 80 (350)
T ss_dssp EEEEEESCCHHHHHTHHHHHHHCSSEEEEEEECS----------SHHHHHHH---HHH----------HTCSEEESSHHH
T ss_pred cEEEEEcChHHHHHHHHHHHHhCCCeEEEEEECC----------CHHHHHHH---HHH----------cCCCeeeCCHHH
Confidence 5999999999997 456777664 8999999997 34443222 111 21112222 244
Q ss_pred ccc-cccceEecCCCcCccchhhHHHhhhcCceEEEeCCCCCCCHHHHHHH---HHCCceEecc
Q 006671 494 PWN-ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVL---KKANVLIAPA 553 (636)
Q Consensus 494 il~-~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~~iL---~~rGIlviPD 553 (636)
++. .++|+++=|.. +..+.+.+...++.|..++||=-=.....||++++ +++|+.+...
T Consensus 81 ll~~~~iDaV~I~tP-~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~~~~l~v~ 143 (350)
T 4had_A 81 MLASDVIDAVYIPLP-TSQHIEWSIKAADAGKHVVCEKPLALKAGDIDAVIAARDRNKVVVTEA 143 (350)
T ss_dssp HHHCSSCSEEEECSC-GGGHHHHHHHHHHTTCEEEECSCCCSSGGGGHHHHHHHHHHTCCEEEC
T ss_pred HhcCCCCCEEEEeCC-CchhHHHHHHHHhcCCEEEEeCCcccchhhHHHHHHHHHHcCCceeEe
Confidence 553 46899888764 56688888888888999999952111234555443 5667665543
No 82
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=95.71 E-value=0.11 Score=54.25 Aligned_cols=134 Identities=13% Similarity=0.143 Sum_probs=76.6
Q ss_pred hhHHHHHHHHHHHHhCCCCCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCC
Q 006671 396 GYGLVFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRS 475 (636)
Q Consensus 396 G~GV~~~~~~~l~~~g~~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~ 475 (636)
++|.+.+++ ..+.+++|++++|.|.|-+|+.++..|.+.|++-|.|.+.+. + +.++...+.+.......
T Consensus 138 ~~Gf~~~L~----~~~~~l~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~-----~--~~~~a~~la~~~~~~~~ 206 (315)
T 3tnl_A 138 GTGYMRALK----EAGHDIIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKD-----D--FYANAEKTVEKINSKTD 206 (315)
T ss_dssp HHHHHHHHH----HTTCCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSS-----T--THHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHH----HcCCCccCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCC-----c--hHHHHHHHHHHhhhhcC
Confidence 566665554 467899999999999999999999999999995467777621 1 13343333221111100
Q ss_pred ccccccccCCceeeCCCCc--c---ccccceEecCCCcCccc---hh---hHHHhhhcCceEEEeCCCCCC-CHHHHHHH
Q 006671 476 LRDYSKTYARSKYYDEAKP--W---NERCDVAFPCASQNEID---QS---DAINLVNSGCRILVEGSNMPC-TPEAVDVL 543 (636)
Q Consensus 476 l~~y~~~~p~a~~i~~~ei--l---~~~cDIliPcA~~n~It---~e---nA~~l~~~~akiVvEgAN~P~-T~eA~~iL 543 (636)
. ....++-++. + -.++||+|-|..-+.-. .. +...| ....+|++-.-.|. |+ -.+.-
T Consensus 207 ~--------~~~~~~~~~~~~l~~~l~~aDiIINaTp~Gm~~~~~~~p~~~~~~l--~~~~~V~DlvY~P~~T~-ll~~A 275 (315)
T 3tnl_A 207 C--------KAQLFDIEDHEQLRKEIAESVIFTNATGVGMKPFEGETLLPSADML--RPELIVSDVVYKPTKTR-LLEIA 275 (315)
T ss_dssp C--------EEEEEETTCHHHHHHHHHTCSEEEECSSTTSTTSTTCCSCCCGGGC--CTTCEEEESCCSSSSCH-HHHHH
T ss_pred C--------ceEEeccchHHHHHhhhcCCCEEEECccCCCCCCCCCCCCCcHHHc--CCCCEEEEeccCCCCCH-HHHHH
Confidence 0 0112211111 1 12789999766532211 11 12223 24568899998884 54 33444
Q ss_pred HHCCceEe
Q 006671 544 KKANVLIA 551 (636)
Q Consensus 544 ~~rGIlvi 551 (636)
+++|..++
T Consensus 276 ~~~G~~~~ 283 (315)
T 3tnl_A 276 EEQGCQTL 283 (315)
T ss_dssp HHTTCEEE
T ss_pred HHCCCeEe
Confidence 66776533
No 83
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=95.71 E-value=0.012 Score=61.50 Aligned_cols=111 Identities=15% Similarity=0.193 Sum_probs=73.0
Q ss_pred CCcEEEEecCccHHHH-HHHHHHHC-CCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeCC-
Q 006671 415 KGLRCVVSGSGKIAMH-VLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE- 491 (636)
Q Consensus 415 ~GkrVaIqGfGNVG~~-aAe~L~e~-GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~~- 491 (636)
+-.||.|+|+|++|.. .++.|.+. ++++++|+|. |.+.+. .+.+.+++....++
T Consensus 4 ~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~----------~~~~~~-------------~~a~~~~~~~~~~~~ 60 (359)
T 3m2t_A 4 SLIKVGLVGIGAQMQENLLPSLLQMQDIRIVAACDS----------DLERAR-------------RVHRFISDIPVLDNV 60 (359)
T ss_dssp CCEEEEEECCSHHHHHTHHHHHHTCTTEEEEEEECS----------SHHHHG-------------GGGGTSCSCCEESSH
T ss_pred CcceEEEECCCHHHHHHHHHHHHhCCCcEEEEEEcC----------CHHHHH-------------HHHHhcCCCcccCCH
Confidence 4579999999999984 78888775 7899999997 333321 11222333333332
Q ss_pred CCccc-cccceEecCCCcCccchhhHHHhhhcCceEEEeCCCCCC--C-HHHHH---HHHHCCceEec
Q 006671 492 AKPWN-ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPC--T-PEAVD---VLKKANVLIAP 552 (636)
Q Consensus 492 ~eil~-~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgAN~P~--T-~eA~~---iL~~rGIlviP 552 (636)
++++. .++|+++=|.. +..+.+.+...++.|..++||= |+ | .++++ ..+++|+.+.-
T Consensus 61 ~~ll~~~~vD~V~i~tp-~~~H~~~~~~al~aGkhVl~EK---Pla~~~~e~~~l~~~a~~~g~~~~v 124 (359)
T 3m2t_A 61 PAMLNQVPLDAVVMAGP-PQLHFEMGLLAMSKGVNVFVEK---PPCATLEELETLIDAARRSDVVSGV 124 (359)
T ss_dssp HHHHHHSCCSEEEECSC-HHHHHHHHHHHHHTTCEEEECS---CSCSSHHHHHHHHHHHHHHTCCEEE
T ss_pred HHHhcCCCCCEEEEcCC-cHHHHHHHHHHHHCCCeEEEEC---CCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 44554 47899997664 5567788888888899999984 53 2 34443 34567876553
No 84
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=95.71 E-value=0.089 Score=54.06 Aligned_cols=124 Identities=21% Similarity=0.188 Sum_probs=74.9
Q ss_pred hhHHHHHHHHHHHHhCCCCCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCC
Q 006671 396 GYGLVFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRS 475 (636)
Q Consensus 396 G~GV~~~~~~~l~~~g~~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~ 475 (636)
|+|.+.++ +..+.+++|++++|.|.|.+|+.++..|.+.|++-|.|.+. +.++...| .+ .
T Consensus 106 ~~G~~~~L----~~~~~~~~~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nR----------t~~ka~~L---a~---~ 165 (282)
T 3fbt_A 106 YIGFGKML----SKFRVEIKNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTR----------NPEKTSEI---YG---E 165 (282)
T ss_dssp HHHHHHHH----HHTTCCCTTSEEEEECSSTTHHHHHHHHHHTTCSEEEEEES----------CHHHHHHH---CT---T
T ss_pred HHHHHHHH----HHcCCCccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeC----------CHHHHHHH---HH---h
Confidence 55665554 44578899999999999999999999999999955677776 23332212 11 1
Q ss_pred ccccccccCCceeeCCCCccccccceEecCCCcCccch-----hhHHHhhhcCceEEEeCCCCCC-CHHHHHHHHHCCce
Q 006671 476 LRDYSKTYARSKYYDEAKPWNERCDVAFPCASQNEIDQ-----SDAINLVNSGCRILVEGSNMPC-TPEAVDVLKKANVL 549 (636)
Q Consensus 476 l~~y~~~~p~a~~i~~~eil~~~cDIliPcA~~n~It~-----enA~~l~~~~akiVvEgAN~P~-T~eA~~iL~~rGIl 549 (636)
+... .+ ..+ .+ + ++||+|-|..-+.-.. -+...+ . ...+|.+-.-+|. |+ -.+.-+++|..
T Consensus 166 ~~~~--~~---~~l--~~-l--~~DivInaTp~Gm~~~~~~~pi~~~~l-~-~~~~v~DlvY~P~~T~-ll~~A~~~G~~ 232 (282)
T 3fbt_A 166 FKVI--SY---DEL--SN-L--KGDVIINCTPKGMYPKEGESPVDKEVV-A-KFSSAVDLIYNPVETL-FLKYARESGVK 232 (282)
T ss_dssp SEEE--EH---HHH--TT-C--CCSEEEECSSTTSTTSTTCCSSCHHHH-T-TCSEEEESCCSSSSCH-HHHHHHHTTCE
T ss_pred cCcc--cH---HHH--Hh-c--cCCEEEECCccCccCCCccCCCCHHHc-C-CCCEEEEEeeCCCCCH-HHHHHHHCcCe
Confidence 1100 00 001 12 2 8999997764322111 122233 2 4568899998884 54 34445677765
Q ss_pred Eec
Q 006671 550 IAP 552 (636)
Q Consensus 550 viP 552 (636)
+++
T Consensus 233 ~~~ 235 (282)
T 3fbt_A 233 AVN 235 (282)
T ss_dssp EEC
T ss_pred EeC
Confidence 543
No 85
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=95.70 E-value=0.026 Score=57.62 Aligned_cols=113 Identities=10% Similarity=0.030 Sum_probs=66.6
Q ss_pred CCCCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeCC
Q 006671 412 KELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE 491 (636)
Q Consensus 412 ~~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~~ 491 (636)
..+..++|.|.|+|++|..+|+.|.+.|..| .+.|. +.+++..+.+ . ++...+.
T Consensus 5 ~~~~~~~IgiIG~G~mG~~~A~~l~~~G~~V-~~~dr----------~~~~~~~~~~---~------------g~~~~~~ 58 (306)
T 3l6d_A 5 DESFEFDVSVIGLGAMGTIMAQVLLKQGKRV-AIWNR----------SPGKAAALVA---A------------GAHLCES 58 (306)
T ss_dssp CCCCSCSEEEECCSHHHHHHHHHHHHTTCCE-EEECS----------SHHHHHHHHH---H------------TCEECSS
T ss_pred cccCCCeEEEECCCHHHHHHHHHHHHCCCEE-EEEeC----------CHHHHHHHHH---C------------CCeecCC
Confidence 3556789999999999999999999999985 45565 3344332221 1 1111111
Q ss_pred -CCccccccceEecCCCcCccchh-----hHHHhhhcCceEEEeCCC-CCCC-HHHHHHHHHCCceEecc
Q 006671 492 -AKPWNERCDVAFPCASQNEIDQS-----DAINLVNSGCRILVEGSN-MPCT-PEAVDVLKKANVLIAPA 553 (636)
Q Consensus 492 -~eil~~~cDIliPcA~~n~It~e-----nA~~l~~~~akiVvEgAN-~P~T-~eA~~iL~~rGIlviPD 553 (636)
.++ -.+|||+|-|........+ ....+ ..+. +|+.-++ .|.+ .+..+.+.++|+.|+..
T Consensus 59 ~~e~-~~~aDvVi~~vp~~~~~~~v~~~~~l~~~-~~g~-ivid~st~~~~~~~~l~~~~~~~g~~~vda 125 (306)
T 3l6d_A 59 VKAA-LSASPATIFVLLDNHATHEVLGMPGVARA-LAHR-TIVDYTTNAQDEGLALQGLVNQAGGHYVKG 125 (306)
T ss_dssp HHHH-HHHSSEEEECCSSHHHHHHHHTSTTHHHH-TTTC-EEEECCCCCTTHHHHHHHHHHHTTCEEEEE
T ss_pred HHHH-HhcCCEEEEEeCCHHHHHHHhcccchhhc-cCCC-EEEECCCCCHHHHHHHHHHHHHcCCeEEec
Confidence 111 2368999988775432221 12222 2244 4555544 4433 34457788999988753
No 86
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=95.70 E-value=0.014 Score=60.52 Aligned_cols=114 Identities=14% Similarity=0.033 Sum_probs=72.7
Q ss_pred CcEEEEecCccHHHHHHHHHHHC-CCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeCCCCc
Q 006671 416 GLRCVVSGSGKIAMHVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKP 494 (636)
Q Consensus 416 GkrVaIqGfGNVG~~aAe~L~e~-GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~~~ei 494 (636)
-.||.|+|+|++|...++.|.+. ++++++|+|. |.+.+..+. +..+ +..| -+.+++
T Consensus 5 ~~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~----------~~~~~~~~~---~~~g-~~~~---------~~~~~~ 61 (354)
T 3db2_A 5 PVGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSR----------TEDKREKFG---KRYN-CAGD---------ATMEAL 61 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTCSSEEEEEEECS----------SHHHHHHHH---HHHT-CCCC---------SSHHHH
T ss_pred cceEEEEccCHHHHHHHHHHHhCCCcEEEEEECC----------CHHHHHHHH---HHcC-CCCc---------CCHHHH
Confidence 36899999999999999998876 8999999997 333332221 1111 1111 112344
Q ss_pred c-ccccceEecCCCcCccchhhHHHhhhcCceEEEeCCCCCCCHHHHH---HHHHCCceEecc
Q 006671 495 W-NERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVD---VLKKANVLIAPA 553 (636)
Q Consensus 495 l-~~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~~---iL~~rGIlviPD 553 (636)
+ +.++|+++-|. .+..+.+.+...++.+..+++|--=.....++.+ ..+++|+.+...
T Consensus 62 l~~~~~D~V~i~t-p~~~h~~~~~~al~~gk~vl~EKP~~~~~~~~~~l~~~a~~~~~~~~v~ 123 (354)
T 3db2_A 62 LAREDVEMVIITV-PNDKHAEVIEQCARSGKHIYVEKPISVSLDHAQRIDQVIKETGVKFLCG 123 (354)
T ss_dssp HHCSSCCEEEECS-CTTSHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHHCCCEEEE
T ss_pred hcCCCCCEEEEeC-ChHHHHHHHHHHHHcCCEEEEccCCCCCHHHHHHHHHHHHHcCCeEEEe
Confidence 4 35789999766 4566788888888889999999621112234443 345677766543
No 87
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=95.66 E-value=0.017 Score=60.35 Aligned_cols=111 Identities=19% Similarity=0.173 Sum_probs=71.7
Q ss_pred CCcEEEEecCccHHHHHHHHHHHC-CCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeCC-C
Q 006671 415 KGLRCVVSGSGKIAMHVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE-A 492 (636)
Q Consensus 415 ~GkrVaIqGfGNVG~~aAe~L~e~-GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~~-~ 492 (636)
+-.+|+|+|+|++|...++.|.+. ++++++|+|. |.+++. .. ... +....++ +
T Consensus 4 ~~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~----------~~~~~~---~a-~~~-----------g~~~~~~~~ 58 (359)
T 3e18_A 4 KKYQLVIVGYGGMGSYHVTLASAADNLEVHGVFDI----------LAEKRE---AA-AQK-----------GLKIYESYE 58 (359)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHTSTTEEEEEEECS----------SHHHHH---HH-HTT-----------TCCBCSCHH
T ss_pred CcCcEEEECcCHHHHHHHHHHHhCCCcEEEEEEcC----------CHHHHH---HH-Hhc-----------CCceeCCHH
Confidence 457899999999999989888876 8899999997 233321 11 111 1222222 3
Q ss_pred Cccc-cccceEecCCCcCccchhhHHHhhhcCceEEEeCCCCCCCHHHHH---HHHHCCceEe
Q 006671 493 KPWN-ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVD---VLKKANVLIA 551 (636)
Q Consensus 493 eil~-~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~~---iL~~rGIlvi 551 (636)
+++. .++|+++=|. .+..+.+.+...++.|..++||=-=.....++.+ ..+++|+.+.
T Consensus 59 ~ll~~~~~D~V~i~t-p~~~h~~~~~~al~aGkhVl~EKP~a~~~~ea~~l~~~a~~~g~~~~ 120 (359)
T 3e18_A 59 AVLADEKVDAVLIAT-PNDSHKELAISALEAGKHVVCEKPVTMTSEDLLAIMDVAKRVNKHFM 120 (359)
T ss_dssp HHHHCTTCCEEEECS-CGGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHHTCCEE
T ss_pred HHhcCCCCCEEEEcC-CcHHHHHHHHHHHHCCCCEEeeCCCcCCHHHHHHHHHHHHHhCCeEE
Confidence 3443 4789999765 5567888888888889999999511112234443 3356677654
No 88
>1o0s_A NAD-ME, NAD-dependent malic enzyme; oxidoreductase, oxidative decarboxylase, rossmann fold, MAla dehydrogenase; HET: NAI; 2.00A {Ascaris suum} SCOP: c.2.1.7 c.58.1.3 PDB: 1llq_A*
Probab=95.65 E-value=0.035 Score=62.48 Aligned_cols=176 Identities=12% Similarity=0.156 Sum_probs=125.7
Q ss_pred CCHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCChhHHHHHHHHhhhhhCCCCccccCcccccCCCCCCCCcchhHHHH
Q 006671 322 KSDNEIMRFCQSFMNEIHRYLGPDKDLPSEEMGVGTREMGYLFGQYRRLAGHFQGSFTGPRIFWSGSSLRTEATGYGLVF 401 (636)
Q Consensus 322 ~S~~El~r~~r~f~~eL~~~IGp~~DVpA~DiGt~~rem~~m~~~y~~l~g~~~g~vTGKp~~~GGs~~r~eATG~GV~~ 401 (636)
.+.+|...|...||..+.+..||..-|-=+|++. ..--.|.+.|+.- . -++.. --.-||-=+..
T Consensus 242 v~g~~Yd~fvdefv~av~~~fGp~~~I~~EDf~~--p~af~il~ryr~~---i-pvFnD----------DiqGTA~V~lA 305 (605)
T 1o0s_A 242 VRGKDYDTLLDNFMKACTKKYGQKTLIQFEDFAN--PNAFRLLDKYQDK---Y-TMFND----------DIQGTASVIVA 305 (605)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHCTTCEEEECSCCH--HHHHHHHHHHTTT---S-EEEEH----------HHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHHHHhCCCcEeeHhhcCC--ccHHHHHHHhccC---C-CeeCc----------ccchHHHHHHH
Confidence 4567888999999999999999988888899863 4455566777652 1 11111 11235555566
Q ss_pred HHHHHHHHhCCCCCCcEEEEecCccHHHHHHHHHHH----CCC------EEEEEeCCCCceeCCC-CCCHHHHHHHHHHH
Q 006671 402 FAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIA----YGA------IPVSVSDAKGYLVDED-GFDYMKISFLRDIK 470 (636)
Q Consensus 402 ~~~~~l~~~g~~l~GkrVaIqGfGNVG~~aAe~L~e----~GA------kVVaVSDs~G~Iydpd-GLDve~L~~L~~~k 470 (636)
++-.+++-.|.+|+..||+|.|.|.-|..+|++|.. .|. +=+-+.|++|.|++.. +|+..+
T Consensus 306 gllnAlki~gk~l~d~riv~~GAGaAgigia~ll~~~m~~~Gl~~eeA~~~i~~vD~~Gli~~~r~~l~~~k-------- 377 (605)
T 1o0s_A 306 GLLTCTRVTKKLVSQEKYLFFGAGAASTGIAEMIVHQMQNEGISKEEACNRIYLMDIDGLVTKNRKEMNPRH-------- 377 (605)
T ss_dssp HHHHHHHHHCCCGGGCCEEEECCSHHHHHHHHHHHHHHHTTTCCHHHHHHTEEEEETTEECBTTCSSCCGGG--------
T ss_pred HHHHHHHHhCCChhhcEEEEECCCHHHHHHHHHHHHHHHHcCCChhhhhCeEEEEECCCceeCCCCCchHHH--------
Confidence 778888888999999999999999999999999988 785 4578999999999753 354322
Q ss_pred hhcCCccccccccCCceeeCCCCcc----ccccceEecCCC-cCccchhhHHHhhh-cCceEEEeCCC
Q 006671 471 SQQRSLRDYSKTYARSKYYDEAKPW----NERCDVAFPCAS-QNEIDQSDAINLVN-SGCRILVEGSN 532 (636)
Q Consensus 471 ~~~g~l~~y~~~~p~a~~i~~~eil----~~~cDIliPcA~-~n~It~enA~~l~~-~~akiVvEgAN 532 (636)
..|++... ....+. .++.||||=++. .+.+|++-.+.+.+ +.-.||---||
T Consensus 378 ------~~~A~~~~-----~~~~L~eav~~vkpdVlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLSN 434 (605)
T 1o0s_A 378 ------VQFAKDMP-----ETTSILEVIRAARPGALIGASTVRGAFNEEVIRAMAEINERPIIFALSN 434 (605)
T ss_dssp ------TTTCBSSC-----CCCCHHHHHHHHCCSEEEECSSCTTCSCHHHHHHHHHHCSSCEEEECCS
T ss_pred ------HHHHhhcC-----CCCCHHHHHhhcCCCEEEEecCCCCCCCHHHHHHHHhcCCCCEEEECCC
Confidence 12211110 001222 347999999996 69999999988853 34678887888
No 89
>3b1j_A Glyceraldehyde 3-phosphate dehydrogenase (NADP+); alpha/beta fold, oxidoreductase-protein binding complex; HET: NAD; 2.20A {Synechococcus elongatus} PDB: 3b1k_A* 3b20_A*
Probab=95.64 E-value=0.046 Score=57.69 Aligned_cols=99 Identities=15% Similarity=0.230 Sum_probs=62.5
Q ss_pred cEEEEecCccHHHHHHHHHHHC---CCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCcccccc----c--cCC--
Q 006671 417 LRCVVSGSGKIAMHVLEKLIAY---GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSK----T--YAR-- 485 (636)
Q Consensus 417 krVaIqGfGNVG~~aAe~L~e~---GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~----~--~p~-- 485 (636)
.||+|.|||.+|+.+++.|.+. ...||+|.|. .|.+.+..|+++....|.+..-.. . +.+
T Consensus 3 ikVgI~G~G~IGr~v~r~l~~~~~~~~evvaInd~---------~~~~~~~~l~~~ds~~G~~~~~v~~~~~~l~v~g~~ 73 (339)
T 3b1j_A 3 IRVAINGFGRIGRNFLRCWFGRQNTDLEVVAINNT---------SDARTAAHLLEYDSVLGRFNADISYDENSITVNGKT 73 (339)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSCCSEEEEEEECS---------SCHHHHHHHHHCCTTTCCCCSCEEEETTEEEETTEE
T ss_pred eEEEEECCCHHHHHHHHHHHhcCCCCeEEEEEecC---------CCHHHHHHHhccccccCCCCCcEEEcCCeeeecCce
Confidence 4899999999999999999886 3789999884 255554444443333332211100 0 001
Q ss_pred ceeeCC---CC-ccc-cccceEecCCCcCccchhhHHHhhhcCce
Q 006671 486 SKYYDE---AK-PWN-ERCDVAFPCASQNEIDQSDAINLVNSGCR 525 (636)
Q Consensus 486 a~~i~~---~e-il~-~~cDIliPcA~~n~It~enA~~l~~~~ak 525 (636)
...+.. ++ .|. ..|||++.|+. ...+.+.+...++.|||
T Consensus 74 i~v~~~~dp~~l~w~~~~vDvV~e~tg-~~~s~e~a~~~l~~Gak 117 (339)
T 3b1j_A 74 MKIVCDRNPLNLPWKEWDIDLVIESTG-VFVTAEGASKHIQAGAK 117 (339)
T ss_dssp EEEECCSCGGGSCTTTTTCCEEEECSS-SCCBHHHHHHHHHTTCS
T ss_pred EEEEecCChHHCcccccCCCEEEECCC-ccccHHHHHHHHHcCCc
Confidence 111111 23 364 58999999974 45677888888888888
No 90
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=95.63 E-value=0.024 Score=57.76 Aligned_cols=118 Identities=10% Similarity=0.129 Sum_probs=73.2
Q ss_pred CCcEEEEecC-ccHHHHHHHHHHH-CCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeC-C
Q 006671 415 KGLRCVVSGS-GKIAMHVLEKLIA-YGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD-E 491 (636)
Q Consensus 415 ~GkrVaIqGf-GNVG~~aAe~L~e-~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~-~ 491 (636)
+..||+|.|+ |.+|+.+++.+.+ .|..++++.|.+..-. .|-|..++ -.+..+ +....+ -
T Consensus 4 ~~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~--~g~d~~~~----------~g~~~~-----~v~~~~dl 66 (273)
T 1dih_A 4 ANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSL--LGSDAGEL----------AGAGKT-----GVTVQSSL 66 (273)
T ss_dssp CBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTT--CSCCTTCS----------SSSSCC-----SCCEESCS
T ss_pred CCcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhh--hhhhHHHH----------cCCCcC-----CceecCCH
Confidence 3469999998 9999999998764 6889999999732100 13332211 001110 112222 2
Q ss_pred CCccccccceEecCCCcCccchhhHHHhhhcCceEEEeCCCCCCCHHHHHHHHH----CCceEecc
Q 006671 492 AKPWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKK----ANVLIAPA 553 (636)
Q Consensus 492 ~eil~~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~~iL~~----rGIlviPD 553 (636)
++++. ++|++|-++... -+.+++...++.+..+|+|-. ..|++..+.|.+ .++++.|.
T Consensus 67 ~~~l~-~~DvVIDft~p~-~~~~~~~~a~~~G~~vVigTt--G~~~e~~~~L~~~a~~~~vv~a~N 128 (273)
T 1dih_A 67 DAVKD-DFDVFIDFTRPE-GTLNHLAFCRQHGKGMVIGTT--GFDEAGKQAIRDAAADIAIVFAAN 128 (273)
T ss_dssp TTTTT-SCSEEEECSCHH-HHHHHHHHHHHTTCEEEECCC--CCCHHHHHHHHHHTTTSCEEECSC
T ss_pred HHHhc-CCCEEEEcCChH-HHHHHHHHHHhCCCCEEEECC--CCCHHHHHHHHHhcCCCCEEEEec
Confidence 34454 799999888644 346777777889999999876 366665555543 24555543
No 91
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=95.61 E-value=0.02 Score=59.67 Aligned_cols=52 Identities=19% Similarity=0.284 Sum_probs=44.5
Q ss_pred CCcchhHHHHHHHHHHHHhCCCCCCcEEEEecCcc-HHHHHHHHHHHCCCEEEEEeCC
Q 006671 392 TEATGYGLVFFAQLILADMNKELKGLRCVVSGSGK-IAMHVLEKLIAYGAIPVSVSDA 448 (636)
Q Consensus 392 ~eATG~GV~~~~~~~l~~~g~~l~GkrVaIqGfGN-VG~~aAe~L~e~GAkVVaVSDs 448 (636)
...|.+|++ ++|++.+.++.|++|+|.|.|+ ||..+|.+|...||+ |+|+++
T Consensus 145 ~PcTp~gi~----~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAt-Vtv~hs 197 (301)
T 1a4i_A 145 IPCTPKGCL----ELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNAT-VTTCHS 197 (301)
T ss_dssp CCHHHHHHH----HHHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCE-EEEECT
T ss_pred cCchHHHHH----HHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHhCCCe-EEEEEC
Confidence 357888854 5566778999999999999996 899999999999999 678876
No 92
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=95.60 E-value=0.16 Score=52.54 Aligned_cols=37 Identities=27% Similarity=0.428 Sum_probs=32.0
Q ss_pred CCCCCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeCC
Q 006671 411 NKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (636)
Q Consensus 411 g~~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs 448 (636)
+.++.|++|.|.|+|++|+.+|+.|...|.+|++ .|.
T Consensus 139 ~~~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~-~d~ 175 (311)
T 2cuk_A 139 GLDLQGLTLGLVGMGRIGQAVAKRALAFGMRVVY-HAR 175 (311)
T ss_dssp BCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEE-ECS
T ss_pred CcCCCCCEEEEEEECHHHHHHHHHHHHCCCEEEE-ECC
Confidence 3478999999999999999999999999999654 444
No 93
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=95.59 E-value=0.11 Score=53.19 Aligned_cols=130 Identities=16% Similarity=0.054 Sum_probs=75.7
Q ss_pred hhHHHHHHHHHHHHhCCCCCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCC
Q 006671 396 GYGLVFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRS 475 (636)
Q Consensus 396 G~GV~~~~~~~l~~~g~~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~ 475 (636)
|+|.+.+++ ..+.+++|++++|.|.|.+|+.++..|.+.|++-|.|.+. +.++...+.+.....
T Consensus 111 ~~G~~~~l~----~~~~~l~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R----------~~~~a~~la~~~~~~-- 174 (283)
T 3jyo_A 111 VSGFGRGME----EGLPNAKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADL----------DTSRAQALADVINNA-- 174 (283)
T ss_dssp HHHHHHHHH----HHCTTCCCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECS----------SHHHHHHHHHHHHHH--
T ss_pred HHHHHHHHH----HhCcCcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEEC----------CHHHHHHHHHHHHhh--
Confidence 566655554 4567899999999999999999999999999955677776 234433332211110
Q ss_pred ccccccccCC--ceeeCCCCccc--cccceEecCCCcCccch----hhHHHhhhcCceEEEeCCCCC-CCHHHHHHHHHC
Q 006671 476 LRDYSKTYAR--SKYYDEAKPWN--ERCDVAFPCASQNEIDQ----SDAINLVNSGCRILVEGSNMP-CTPEAVDVLKKA 546 (636)
Q Consensus 476 l~~y~~~~p~--a~~i~~~eil~--~~cDIliPcA~~n~It~----enA~~l~~~~akiVvEgAN~P-~T~eA~~iL~~r 546 (636)
+++ ....+.+++-+ .++||+|-|..-+.-.. -+...| ....+|.+-.-+| -|+= .+.-+++
T Consensus 175 -------~~~~~i~~~~~~~l~~~l~~~DiVInaTp~Gm~~~~~~pi~~~~l--~~~~~v~DlvY~P~~T~l-l~~A~~~ 244 (283)
T 3jyo_A 175 -------VGREAVVGVDARGIEDVIAAADGVVNATPMGMPAHPGTAFDVSCL--TKDHWVGDVVYMPIETEL-LKAARAL 244 (283)
T ss_dssp -------HTSCCEEEECSTTHHHHHHHSSEEEECSSTTSTTSCSCSSCGGGC--CTTCEEEECCCSSSSCHH-HHHHHHH
T ss_pred -------cCCceEEEcCHHHHHHHHhcCCEEEECCCCCCCCCCCCCCCHHHh--CCCCEEEEecCCCCCCHH-HHHHHHC
Confidence 111 11222222222 37899997765322110 011222 1456889999888 4653 3334566
Q ss_pred CceEe
Q 006671 547 NVLIA 551 (636)
Q Consensus 547 GIlvi 551 (636)
|..++
T Consensus 245 G~~~~ 249 (283)
T 3jyo_A 245 GCETL 249 (283)
T ss_dssp TCCEE
T ss_pred cCeEe
Confidence 65433
No 94
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=95.59 E-value=0.026 Score=57.70 Aligned_cols=110 Identities=16% Similarity=0.201 Sum_probs=67.9
Q ss_pred cEEEEecCccHHH-HHHHHHHHC-CCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeCCCCc
Q 006671 417 LRCVVSGSGKIAM-HVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKP 494 (636)
Q Consensus 417 krVaIqGfGNVG~-~aAe~L~e~-GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~~~ei 494 (636)
.||.|+|+|++|. ..++.|.+. +.+++ |+|. +.+++..+ .+..+ +.. .+.+..+.
T Consensus 3 ~~igiIG~G~ig~~~~~~~l~~~~~~~l~-v~d~----------~~~~~~~~---a~~~g-~~~--------~~~~~~~~ 59 (323)
T 1xea_A 3 LKIAMIGLGDIAQKAYLPVLAQWPDIELV-LCTR----------NPKVLGTL---ATRYR-VSA--------TCTDYRDV 59 (323)
T ss_dssp EEEEEECCCHHHHHTHHHHHTTSTTEEEE-EECS----------CHHHHHHH---HHHTT-CCC--------CCSSTTGG
T ss_pred cEEEEECCCHHHHHHHHHHHHhCCCceEE-EEeC----------CHHHHHHH---HHHcC-CCc--------cccCHHHH
Confidence 4899999999998 478888764 78888 9987 33333222 11111 110 02233344
Q ss_pred cccccceEecCCCcCccchhhHHHhhhcCceEEEeCCCCCCCH-HHHH---HHHHCCceEe
Q 006671 495 WNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTP-EAVD---VLKKANVLIA 551 (636)
Q Consensus 495 l~~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~-eA~~---iL~~rGIlvi 551 (636)
+..++|+++-|.. +..+.+.+...++.|..+++|-- +.+|. ++.+ ..+++|+.+.
T Consensus 60 l~~~~D~V~i~tp-~~~h~~~~~~al~~Gk~V~~EKP-~~~~~~~~~~l~~~a~~~g~~~~ 118 (323)
T 1xea_A 60 LQYGVDAVMIHAA-TDVHSTLAAFFLHLGIPTFVDKP-LAASAQECENLYELAEKHHQPLY 118 (323)
T ss_dssp GGGCCSEEEECSC-GGGHHHHHHHHHHTTCCEEEESC-SCSSHHHHHHHHHHHHHTTCCEE
T ss_pred hhcCCCEEEEECC-chhHHHHHHHHHHCCCeEEEeCC-CcCCHHHHHHHHHHHHhcCCeEE
Confidence 4568999998876 55677777777777888999841 11233 3333 3456776655
No 95
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=95.58 E-value=0.21 Score=50.93 Aligned_cols=129 Identities=14% Similarity=0.183 Sum_probs=78.4
Q ss_pred hhHHHHHHHHHHHHhCCCCCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCC
Q 006671 396 GYGLVFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRS 475 (636)
Q Consensus 396 G~GV~~~~~~~l~~~g~~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~ 475 (636)
|.|.+.+ |+..+.++++++++|.|.|-.++.++-.|.+.|++-|.|.+. +.++...|.+....
T Consensus 109 ~~Gf~~~----L~~~g~~~~~~~~lilGaGGaarai~~aL~~~g~~~i~i~nR----------t~~ra~~la~~~~~--- 171 (269)
T 3tum_A 109 GAGFLGA----AHKHGFEPAGKRALVIGCGGVGSAIAYALAEAGIASITLCDP----------STARMGAVCELLGN--- 171 (269)
T ss_dssp HHHHHHH----HHHTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECS----------CHHHHHHHHHHHHH---
T ss_pred hHHHHHH----HHHhCCCcccCeEEEEecHHHHHHHHHHHHHhCCCeEEEeCC----------CHHHHHHHHHHHhc---
Confidence 5565544 455688999999999999999999999999999877888886 44444434332211
Q ss_pred ccccccccCCceeeCCCCccccccceEecCCCcCc-------cchhhHHHhhhcCceEEEeCCCCC-CCHHHHHHHHHCC
Q 006671 476 LRDYSKTYARSKYYDEAKPWNERCDVAFPCASQNE-------IDQSDAINLVNSGCRILVEGSNMP-CTPEAVDVLKKAN 547 (636)
Q Consensus 476 l~~y~~~~p~a~~i~~~eil~~~cDIliPcA~~n~-------It~enA~~l~~~~akiVvEgAN~P-~T~eA~~iL~~rG 547 (636)
.++........+. ..++|++|-|..-+. ++......+ ....+|.+-.-.| -|+= .+.-+++|
T Consensus 172 ------~~~~~~~~~~~~~-~~~~dliiNaTp~Gm~~~~~~p~~~~~~~~l--~~~~~v~D~vY~P~~T~l-l~~A~~~G 241 (269)
T 3tum_A 172 ------GFPGLTVSTQFSG-LEDFDLVANASPVGMGTRAELPLSAALLATL--QPDTLVADVVTSPEITPL-LNRARQVG 241 (269)
T ss_dssp ------HCTTCEEESCCSC-STTCSEEEECSSTTCSTTCCCSSCHHHHHTC--CTTSEEEECCCSSSSCHH-HHHHHHHT
T ss_pred ------cCCcceehhhhhh-hhcccccccCCccccCCCCCCCCChHHHhcc--CCCcEEEEEccCCCCCHH-HHHHHHCc
Confidence 1222222111111 236899998876432 122222222 1345888988888 4543 33445666
Q ss_pred ceEe
Q 006671 548 VLIA 551 (636)
Q Consensus 548 Ilvi 551 (636)
..++
T Consensus 242 ~~~~ 245 (269)
T 3tum_A 242 CRIQ 245 (269)
T ss_dssp CEEE
T ss_pred CEEE
Confidence 5444
No 96
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=95.58 E-value=0.066 Score=48.77 Aligned_cols=36 Identities=25% Similarity=0.290 Sum_probs=29.4
Q ss_pred hCCCCCCcEEEEecCccHHHHHHHHHHHCCCEEEEE
Q 006671 410 MNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSV 445 (636)
Q Consensus 410 ~g~~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaV 445 (636)
+...+.+++|+|.|+|.+|+.+++.|.+.|.+|+.+
T Consensus 13 ~~~~~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vi 48 (155)
T 2g1u_A 13 MSKKQKSKYIVIFGCGRLGSLIANLASSSGHSVVVV 48 (155)
T ss_dssp ----CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEE
T ss_pred hhcccCCCcEEEECCCHHHHHHHHHHHhCCCeEEEE
Confidence 456778899999999999999999999999986655
No 97
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=95.56 E-value=0.017 Score=59.25 Aligned_cols=109 Identities=17% Similarity=0.167 Sum_probs=70.2
Q ss_pred CcEEEEecCccHHH-HHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeCC-CC
Q 006671 416 GLRCVVSGSGKIAM-HVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE-AK 493 (636)
Q Consensus 416 GkrVaIqGfGNVG~-~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~~-~e 493 (636)
-.||.|+|+|++|. ..+..|...|+++|+|+|. +++-. ++ + .+ .|++.+..++ ++
T Consensus 4 ~~rvgiiG~G~~~~~~~~~~l~~~~~~lvav~d~-----~~~~~--~~---~---a~----------~~~~~~~~~~~~~ 60 (336)
T 2p2s_A 4 KIRFAAIGLAHNHIYDMCQQLIDAGAELAGVFES-----DSDNR--AK---F---TS----------LFPSVPFAASAEQ 60 (336)
T ss_dssp CCEEEEECCSSTHHHHHHHHHHHTTCEEEEEECS-----CTTSC--HH---H---HH----------HSTTCCBCSCHHH
T ss_pred ccEEEEECCChHHHHHhhhhhcCCCcEEEEEeCC-----CHHHH--HH---H---HH----------hcCCCcccCCHHH
Confidence 36899999999996 4667676789999999997 44322 11 1 11 1222222222 34
Q ss_pred ccc-cccceEecCCCcCccchhhHHHhhhcCceEEEeCCCCCC--C-HHHHHH---HHHCCceEe
Q 006671 494 PWN-ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPC--T-PEAVDV---LKKANVLIA 551 (636)
Q Consensus 494 il~-~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgAN~P~--T-~eA~~i---L~~rGIlvi 551 (636)
++. .++|+++-|.. +..+.+.+...++.|..++||= |+ | .++.++ .+++|+.+.
T Consensus 61 ll~~~~~D~V~i~tp-~~~h~~~~~~al~aGkhVl~EK---P~a~~~~e~~~l~~~a~~~g~~~~ 121 (336)
T 2p2s_A 61 LITDASIDLIACAVI-PCDRAELALRTLDAGKDFFTAK---PPLTTLEQLDAVQRRVAETGRKFA 121 (336)
T ss_dssp HHTCTTCCEEEECSC-GGGHHHHHHHHHHTTCEEEECS---SCCSCHHHHHHHHHHHHHHCCCEE
T ss_pred HhhCCCCCEEEEeCC-hhhHHHHHHHHHHCCCcEEEeC---CCCCCHHHHHHHHHHHHHcCCEEE
Confidence 453 47999997764 5667788887788899999984 53 3 344443 356787664
No 98
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=95.55 E-value=0.015 Score=60.89 Aligned_cols=112 Identities=15% Similarity=0.172 Sum_probs=71.9
Q ss_pred CcEEEEecCccHHH-HHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeCC-CC
Q 006671 416 GLRCVVSGSGKIAM-HVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE-AK 493 (636)
Q Consensus 416 GkrVaIqGfGNVG~-~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~~-~e 493 (636)
-.||.|+|+|.++. ..+..|...++++++|+|. |.+....+ .+. |+.....++ ++
T Consensus 26 ~irvgiiG~G~~~~~~~~~~~~~~~~~lvav~d~----------~~~~a~~~---a~~----------~~~~~~~~~~~~ 82 (361)
T 3u3x_A 26 ELRFAAVGLNHNHIYGQVNCLLRAGARLAGFHEK----------DDALAAEF---SAV----------YADARRIATAEE 82 (361)
T ss_dssp CCEEEEECCCSTTHHHHHHHHHHTTCEEEEEECS----------CHHHHHHH---HHH----------SSSCCEESCHHH
T ss_pred CcEEEEECcCHHHHHHHHHHhhcCCcEEEEEEcC----------CHHHHHHH---HHH----------cCCCcccCCHHH
Confidence 46999999999985 4566777789999999997 33433212 111 222222222 44
Q ss_pred ccc-cccceEecCCCcCccchhhHHHhhhcCceEEEeCCCCCCCHHHHHH---HHHCCceEe
Q 006671 494 PWN-ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDV---LKKANVLIA 551 (636)
Q Consensus 494 il~-~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~~i---L~~rGIlvi 551 (636)
+++ .++|+++=|. .+..+.+.+...++.|..++||=-=.....++.++ .+++|+.+.
T Consensus 83 ll~~~~vD~V~I~t-p~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~l~ 143 (361)
T 3u3x_A 83 ILEDENIGLIVSAA-VSSERAELAIRAMQHGKDVLVDKPGMTSFDQLAKLRRVQAETGRIFS 143 (361)
T ss_dssp HHTCTTCCEEEECC-CHHHHHHHHHHHHHTTCEEEEESCSCSSHHHHHHHHHHHHTTCCCEE
T ss_pred HhcCCCCCEEEEeC-ChHHHHHHHHHHHHCCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEE
Confidence 554 4699999555 56678888888888899999995211122345443 356777654
No 99
>2d2i_A Glyceraldehyde 3-phosphate dehydrogenase; rossmann fold, protein-NADP+ complex, oxidoreductase; HET: NAP; 2.50A {Synechococcus SP} PDB: 2duu_A
Probab=95.52 E-value=0.051 Score=58.28 Aligned_cols=99 Identities=15% Similarity=0.230 Sum_probs=62.7
Q ss_pred cEEEEecCccHHHHHHHHHHHC---CCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCcccccc----c--cCC--
Q 006671 417 LRCVVSGSGKIAMHVLEKLIAY---GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSK----T--YAR-- 485 (636)
Q Consensus 417 krVaIqGfGNVG~~aAe~L~e~---GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~----~--~p~-- 485 (636)
.||+|.|||.+|+.+++.|.+. ...||+|.|. .|.+.+..|+++....|.+..-.. . +.+
T Consensus 3 ikVgInGfGrIGr~vlR~l~~~~~~~veIVaInd~---------~d~~~~a~ll~yds~~G~~~~~v~~~~~~l~v~g~~ 73 (380)
T 2d2i_A 3 IRVAINGFGRIGRNFLRCWFGRQNTDLEVVAINNT---------SDARTAAHLLEYDSVLGRFNADISYDENSITVNGKT 73 (380)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSSCSEEEEEEECS---------SCHHHHHHHHHCCTTTCCCCSCEEEETTEEEETTEE
T ss_pred cEEEEECcCHHHHHHHHHHhcCCCCCEEEEEEecC---------CCHHHHHHhhcccccCCCCCCcEEEeCCeEEECCeE
Confidence 4899999999999999999886 3789999984 255555445444333333211100 0 001
Q ss_pred ceeeCC---CC-ccc-cccceEecCCCcCccchhhHHHhhhcCce
Q 006671 486 SKYYDE---AK-PWN-ERCDVAFPCASQNEIDQSDAINLVNSGCR 525 (636)
Q Consensus 486 a~~i~~---~e-il~-~~cDIliPcA~~n~It~enA~~l~~~~ak 525 (636)
...+.. ++ .|. ..+||++.|+. .-.+.+.|...++.|||
T Consensus 74 i~v~~~~dp~~l~w~~~gvDvV~e~TG-~f~s~e~a~~hl~aGak 117 (380)
T 2d2i_A 74 MKIVCDRNPLNLPWKEWDIDLVIESTG-VFVTAEGASKHIQAGAK 117 (380)
T ss_dssp EEEECCSCGGGCCHHHHTCCEEEECSS-SCCBHHHHHHHHHTTCS
T ss_pred EEEEecCChHHCCcccCCCCEEEECCC-ccccHHHHHHHHHcCCc
Confidence 111111 22 353 58999999975 44577888888888888
No 100
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=95.52 E-value=0.023 Score=59.38 Aligned_cols=107 Identities=15% Similarity=0.162 Sum_probs=71.2
Q ss_pred CcEEEEecCccHHHH-HHHHHHHC-CCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeCC-C
Q 006671 416 GLRCVVSGSGKIAMH-VLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE-A 492 (636)
Q Consensus 416 GkrVaIqGfGNVG~~-aAe~L~e~-GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~~-~ 492 (636)
-.||+|+|+|++|.. .+..|.+. +++|++|+|. |.+++ . .. +++....++ +
T Consensus 7 ~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~----------~~~~~---~---~~----------~~~~~~~~~~~ 60 (364)
T 3e82_A 7 TINIALIGYGFVGKTFHAPLIRSVPGLNLAFVASR----------DEEKV---K---RD----------LPDVTVIASPE 60 (364)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECS----------CHHHH---H---HH----------CTTSEEESCHH
T ss_pred cceEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcC----------CHHHH---H---hh----------CCCCcEECCHH
Confidence 368999999999985 67777665 8999999997 22332 1 11 123333332 3
Q ss_pred Cccc-cccceEecCCCcCccchhhHHHhhhcCceEEEeCCCCCC--C-HHHH---HHHHHCCceEec
Q 006671 493 KPWN-ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPC--T-PEAV---DVLKKANVLIAP 552 (636)
Q Consensus 493 eil~-~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgAN~P~--T-~eA~---~iL~~rGIlviP 552 (636)
+++. .++|+++-|. .+..+.+.+...++.|..++||= |+ | .++. +..+++|+.+..
T Consensus 61 ~ll~~~~~D~V~i~t-p~~~H~~~~~~al~aGk~Vl~EK---Pla~~~~e~~~l~~~a~~~g~~~~v 123 (364)
T 3e82_A 61 AAVQHPDVDLVVIAS-PNATHAPLARLALNAGKHVVVDK---PFTLDMQEARELIALAEEKQRLLSV 123 (364)
T ss_dssp HHHTCTTCSEEEECS-CGGGHHHHHHHHHHTTCEEEECS---CSCSSHHHHHHHHHHHHHTTCCEEE
T ss_pred HHhcCCCCCEEEEeC-ChHHHHHHHHHHHHCCCcEEEeC---CCcCCHHHHHHHHHHHHHhCCeEEE
Confidence 4553 5789999885 56678888888888899999985 32 2 3343 344677876653
No 101
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=95.48 E-value=0.031 Score=61.91 Aligned_cols=108 Identities=13% Similarity=0.160 Sum_probs=66.7
Q ss_pred HhCCCCCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCcee
Q 006671 409 DMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKY 488 (636)
Q Consensus 409 ~~g~~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~ 488 (636)
..+..+.|++|.|.|+|+||+.+|+.|...|++|+ +.|. + .... +.. .. .+.++
T Consensus 270 ~~g~~L~GktVgIIG~G~IG~~vA~~l~~~G~~V~-v~d~-------~---~~~~--~~a-~~------------~G~~~ 323 (494)
T 3d64_A 270 ATDVMIAGKIAVVAGYGDVGKGCAQSLRGLGATVW-VTEI-------D---PICA--LQA-AM------------EGYRV 323 (494)
T ss_dssp HHCCCCTTCEEEEECCSHHHHHHHHHHHTTTCEEE-EECS-------C---HHHH--HHH-HT------------TTCEE
T ss_pred ccccccCCCEEEEEccCHHHHHHHHHHHHCCCEEE-EEeC-------C---hHhH--HHH-HH------------cCCEe
Confidence 35778999999999999999999999999999954 4444 2 1111 000 00 02222
Q ss_pred eCCCCccccccceEecC-CCcCccchhhHHHhhhcCceEEEeCCCCCC--CHHHHHHHHH
Q 006671 489 YDEAKPWNERCDVAFPC-ASQNEIDQSDAINLVNSGCRILVEGSNMPC--TPEAVDVLKK 545 (636)
Q Consensus 489 i~~~eil~~~cDIliPc-A~~n~It~enA~~l~~~~akiVvEgAN~P~--T~eA~~iL~~ 545 (636)
.+-++++ ..|||++-| .+.+.|+.+....+ +.++ +|+--|-+++ ..++-+.|++
T Consensus 324 ~~l~ell-~~aDiVi~~~~t~~lI~~~~l~~M-K~gA-ilINvgrg~veID~~aL~AL~~ 380 (494)
T 3d64_A 324 VTMEYAA-DKADIFVTATGNYHVINHDHMKAM-RHNA-IVCNIGHFDSEIDVASTRQYQW 380 (494)
T ss_dssp CCHHHHT-TTCSEEEECSSSSCSBCHHHHHHC-CTTE-EEEECSSSSCSBCCGGGTTSEE
T ss_pred CCHHHHH-hcCCEEEECCCcccccCHHHHhhC-CCCc-EEEEcCCCcchhchHHHHhhhc
Confidence 2212222 379999988 45678888776665 3344 4555555554 4444444433
No 102
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=95.47 E-value=0.063 Score=54.98 Aligned_cols=112 Identities=19% Similarity=0.269 Sum_probs=70.1
Q ss_pred CcEEEEecCccHHHHHHHHHH-H-CCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeCC-C
Q 006671 416 GLRCVVSGSGKIAMHVLEKLI-A-YGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE-A 492 (636)
Q Consensus 416 GkrVaIqGfGNVG~~aAe~L~-e-~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~~-~ 492 (636)
-.+|.|+|+|++|...++.|. + .++++|+|+|. +.+++..+ .+..+ .....++ +
T Consensus 8 ~~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~----------~~~~~~~~---a~~~g----------~~~~~~~~~ 64 (346)
T 3cea_A 8 PLRAAIIGLGRLGERHARHLVNKIQGVKLVAACAL----------DSNQLEWA---KNELG----------VETTYTNYK 64 (346)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECS----------CHHHHHHH---HHTTC----------CSEEESCHH
T ss_pred cceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecC----------CHHHHHHH---HHHhC----------CCcccCCHH
Confidence 468999999999999998887 5 48899999997 33333211 11111 1012221 3
Q ss_pred Cccc-cccceEecCCCcCccchhhHHHhhhcCceEEEeCCCCCCCH-HHHHHH---HHC-CceEec
Q 006671 493 KPWN-ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTP-EAVDVL---KKA-NVLIAP 552 (636)
Q Consensus 493 eil~-~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~-eA~~iL---~~r-GIlviP 552 (636)
+++. .++|+++-|.. +..+.+.+...++.|..+++|-- +.+|. ++.++. +++ |+.+..
T Consensus 65 ~~l~~~~~D~V~i~tp-~~~h~~~~~~al~~G~~v~~eKp-~~~~~~~~~~l~~~a~~~~~~~~~~ 128 (346)
T 3cea_A 65 DMIDTENIDAIFIVAP-TPFHPEMTIYAMNAGLNVFCEKP-LGLDFNEVDEMAKVIKSHPNQIFQS 128 (346)
T ss_dssp HHHTTSCCSEEEECSC-GGGHHHHHHHHHHTTCEEEECSC-CCSCHHHHHHHHHHHHTCTTSCEEC
T ss_pred HHhcCCCCCEEEEeCC-hHhHHHHHHHHHHCCCEEEEcCC-CCCCHHHHHHHHHHHHhCCCCeEEE
Confidence 3443 47999998764 55677777777788988999741 11333 444433 566 776653
No 103
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=95.45 E-value=0.027 Score=58.32 Aligned_cols=109 Identities=16% Similarity=0.170 Sum_probs=71.6
Q ss_pred cEEEEecCccHHHH-HHHHHHHC-CCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeCC-CC
Q 006671 417 LRCVVSGSGKIAMH-VLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE-AK 493 (636)
Q Consensus 417 krVaIqGfGNVG~~-aAe~L~e~-GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~~-~e 493 (636)
.||+|+|+|++|.. .+..|.+. +++|++|+|. |.+++ +. . +++....++ ++
T Consensus 8 ~rvgiiG~G~~g~~~~~~~~~~~~~~~l~av~d~----------~~~~~------~~------~----~~~~~~~~~~~~ 61 (352)
T 3kux_A 8 IKVGLLGYGYASKTFHAPLIMGTPGLELAGVSSS----------DASKV------HA------D----WPAIPVVSDPQM 61 (352)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECS----------CHHHH------HT------T----CSSCCEESCHHH
T ss_pred ceEEEECCCHHHHHHHHHHHhhCCCcEEEEEECC----------CHHHH------Hh------h----CCCCceECCHHH
Confidence 68999999999985 67777765 8899999997 23322 11 1 123333332 44
Q ss_pred ccc-cccceEecCCCcCccchhhHHHhhhcCceEEEeCCCCCCCHHHHH---HHHHCCceEec
Q 006671 494 PWN-ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVD---VLKKANVLIAP 552 (636)
Q Consensus 494 il~-~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~~---iL~~rGIlviP 552 (636)
++. .++|+++=|. .+..+.+.+...++.|..++||=-=.....++.+ ..+++|+.+..
T Consensus 62 ll~~~~vD~V~i~t-p~~~H~~~~~~al~aGkhV~~EKPla~~~~e~~~l~~~a~~~g~~~~v 123 (352)
T 3kux_A 62 LFNDPSIDLIVIPT-PNDTHFPLAQSALAAGKHVVVDKPFTVTLSQANALKEHADDAGLLLSV 123 (352)
T ss_dssp HHHCSSCCEEEECS-CTTTHHHHHHHHHHTTCEEEECSSCCSCHHHHHHHHHHHHHTTCCEEE
T ss_pred HhcCCCCCEEEEeC-ChHHHHHHHHHHHHCCCcEEEECCCcCCHHHHHHHHHHHHHcCCeEEE
Confidence 554 4799999877 6667888888888889999998421112234443 34577776653
No 104
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=95.45 E-value=0.015 Score=60.44 Aligned_cols=116 Identities=14% Similarity=0.145 Sum_probs=74.0
Q ss_pred CCCcEEEEecCccHHH-HHHHHHHHC-CCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceee-C
Q 006671 414 LKGLRCVVSGSGKIAM-HVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYY-D 490 (636)
Q Consensus 414 l~GkrVaIqGfGNVG~-~aAe~L~e~-GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i-~ 490 (636)
++-.||.|+|+|++|. ..++.|.+. ++++++|+|. |.+.+..+. +. + +.... +
T Consensus 25 m~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~----------~~~~~~~~a---~~----------~-g~~~~~~ 80 (350)
T 3rc1_A 25 ANPIRVGVIGCADIAWRRALPALEAEPLTEVTAIASR----------RWDRAKRFT---ER----------F-GGEPVEG 80 (350)
T ss_dssp -CCEEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEES----------SHHHHHHHH---HH----------H-CSEEEES
T ss_pred CCceEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcC----------CHHHHHHHH---HH----------c-CCCCcCC
Confidence 3457999999999998 678888776 8899999997 333332121 11 1 11112 2
Q ss_pred CCCccc-cccceEecCCCcCccchhhHHHhhhcCceEEEeCCCCCCCHHHHH---HHHHCCceEeccc
Q 006671 491 EAKPWN-ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVD---VLKKANVLIAPAM 554 (636)
Q Consensus 491 ~~eil~-~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~~---iL~~rGIlviPD~ 554 (636)
-++++. .++|+++=|. .+..+.+.+...++.|..++||=-=.....++.+ ..+++|+.+...+
T Consensus 81 ~~~ll~~~~~D~V~i~t-p~~~h~~~~~~al~aGk~Vl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~ 147 (350)
T 3rc1_A 81 YPALLERDDVDAVYVPL-PAVLHAEWIDRALRAGKHVLAEKPLTTDRPQAERLFAVARERGLLLMENF 147 (350)
T ss_dssp HHHHHTCTTCSEEEECC-CGGGHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHTTCCEEEEC
T ss_pred HHHHhcCCCCCEEEECC-CcHHHHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHhCCEEEEEe
Confidence 234553 4789998765 5567888888888889999999521112234443 4467787665443
No 105
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=95.41 E-value=0.048 Score=56.05 Aligned_cols=115 Identities=15% Similarity=0.136 Sum_probs=72.5
Q ss_pred CCcEEEEecCccHHHHHHHHHHH-CCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceee-CCC
Q 006671 415 KGLRCVVSGSGKIAMHVLEKLIA-YGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYY-DEA 492 (636)
Q Consensus 415 ~GkrVaIqGfGNVG~~aAe~L~e-~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i-~~~ 492 (636)
+-.||.|+|+|++|...++.|.+ .++.+++|+|. ++ +.+..+ .+..+ + .... +.+
T Consensus 4 ~~~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d~-----~~-----~~~~~~---~~~~~-~---------~~~~~~~~ 60 (330)
T 3e9m_A 4 DKIRYGIMSTAQIVPRFVAGLRESAQAEVRGIASR-----RL-----ENAQKM---AKELA-I---------PVAYGSYE 60 (330)
T ss_dssp CCEEEEECSCCTTHHHHHHHHHHSSSEEEEEEBCS-----SS-----HHHHHH---HHHTT-C---------CCCBSSHH
T ss_pred CeEEEEEECchHHHHHHHHHHHhCCCcEEEEEEeC-----CH-----HHHHHH---HHHcC-C---------CceeCCHH
Confidence 44699999999999999999988 47899999997 22 232211 11111 1 0111 123
Q ss_pred Cccc-cccceEecCCCcCccchhhHHHhhhcCceEEEeCCCCCCC-HHHHH---HHHHCCceEeccc
Q 006671 493 KPWN-ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCT-PEAVD---VLKKANVLIAPAM 554 (636)
Q Consensus 493 eil~-~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T-~eA~~---iL~~rGIlviPD~ 554 (636)
+++. .++|+++-|.. +..+.+.+...++.|..+++|--=. +| .++.+ ..+++|+.+...+
T Consensus 61 ~ll~~~~~D~V~i~tp-~~~h~~~~~~al~~gk~vl~EKP~~-~~~~e~~~l~~~a~~~g~~~~v~~ 125 (330)
T 3e9m_A 61 ELCKDETIDIIYIPTY-NQGHYSAAKLALSQGKPVLLEKPFT-LNAAEAEELFAIAQEQGVFLMEAQ 125 (330)
T ss_dssp HHHHCTTCSEEEECCC-GGGHHHHHHHHHHTTCCEEECSSCC-SSHHHHHHHHHHHHHTTCCEEECC
T ss_pred HHhcCCCCCEEEEcCC-CHHHHHHHHHHHHCCCeEEEeCCCC-CCHHHHHHHHHHHHHcCCeEEEEE
Confidence 3443 47899997664 4567777777788899999996211 23 33443 3467787665443
No 106
>2x5j_O E4PDH, D-erythrose-4-phosphate dehydrogenase; oxidoreductase, hydride transfer, aldehyde dehydrogenase, PY biosynthesis; 2.30A {Escherichia coli} PDB: 2xf8_A* 2x5k_O*
Probab=95.41 E-value=0.058 Score=56.84 Aligned_cols=103 Identities=16% Similarity=0.286 Sum_probs=64.4
Q ss_pred cEEEEecCccHHHHHHHHHHH---C-CCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCcccccc----c--cCC-
Q 006671 417 LRCVVSGSGKIAMHVLEKLIA---Y-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSK----T--YAR- 485 (636)
Q Consensus 417 krVaIqGfGNVG~~aAe~L~e---~-GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~----~--~p~- 485 (636)
.||+|.|||.+|+.+++.|.+ . ...||+|.|. .|.+.+..+.++....|.+..-.. . +.+
T Consensus 3 ikVgI~G~G~iGr~l~r~l~~~~~~~~~eivai~~~---------~~~~~~~~ll~~ds~~g~~~~~v~~~~~~l~v~g~ 73 (339)
T 2x5j_O 3 VRVAINGFGRIGRNVVRALYESGRRAEITVVAINEL---------ADAAGMAHLLKYDTSHGRFAWEVRQERDQLFVGDD 73 (339)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTSGGGTEEEEEEECS---------SCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTE
T ss_pred eEEEEECcCHHHHHHHHHHHcCCCCCCEEEEEEeCC---------CCHHHHHHHhcccccCCCCCceEEEcCCeeEECCE
Confidence 489999999999999999988 4 6899999884 255555444443333333221100 0 001
Q ss_pred -ceeeC---CCC-ccc-cccceEecCCCcCccchhhHHHhhhcCce-EEEe
Q 006671 486 -SKYYD---EAK-PWN-ERCDVAFPCASQNEIDQSDAINLVNSGCR-ILVE 529 (636)
Q Consensus 486 -a~~i~---~~e-il~-~~cDIliPcA~~n~It~enA~~l~~~~ak-iVvE 529 (636)
.+..+ +++ .|. ..|||+|.|+. ...+.+.|...++.||| +|+.
T Consensus 74 ~i~v~~~~dp~~l~~~~~~vDvV~e~tg-~~~s~e~a~~~l~~GakkVVId 123 (339)
T 2x5j_O 74 AIRVLHERSLQSLPWRELGVDVVLDCTG-VYGSREHGEAHIAAGAKKVLFS 123 (339)
T ss_dssp EEEEECCSSGGGCCHHHHTCSEEEECSS-SCCSHHHHHHHHHTTCSEEEES
T ss_pred EEEEEecCChHHCcccccCCCEEEECCC-ccccHHHHHHHHHcCCCEEEEe
Confidence 11221 122 353 48999999874 45677888888888888 4443
No 107
>1rm4_O Glyceraldehyde 3-phosphate dehydrogenase A; rossmann fold, GAPDH-NADP complex, oxidoreductase; HET: NDP; 2.00A {Spinacia oleracea} SCOP: c.2.1.3 d.81.1.1 PDB: 1nbo_O* 2hki_A 2pkq_P* 1rm5_O* 1rm3_O* 2pkr_O* 1jn0_O* 3qv1_A* 3k2b_A* 3rvd_A* 2pkq_O*
Probab=95.40 E-value=0.069 Score=56.34 Aligned_cols=106 Identities=17% Similarity=0.207 Sum_probs=68.3
Q ss_pred cEEEEecCccHHHHHHHHHHHC---CCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCcccccc-----c--cCCc
Q 006671 417 LRCVVSGSGKIAMHVLEKLIAY---GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSK-----T--YARS 486 (636)
Q Consensus 417 krVaIqGfGNVG~~aAe~L~e~---GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~-----~--~p~a 486 (636)
.+|+|.|||-+|+.+++.|.+. ...||+|.|. .|.+.+..|++.....|.+..-+. . +.+.
T Consensus 2 ikVgInG~G~IGr~llR~l~~~~~p~~eivaInd~---------~~~~~~a~ll~sds~~G~~~~~v~~~~~~~l~v~g~ 72 (337)
T 1rm4_O 2 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDT---------GGVKQASHLLKYDSILGTFDADVKTAGDSAISVDGK 72 (337)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCSSCSEEEEEEECT---------TCHHHHHHHHHCCTTTCSCSSCEEECTTSEEEETTE
T ss_pred eEEEEECCCHHHHHHHHHHHhCCCCCeEEEEEEcC---------CCHHHHHHHhcccccCCCccceeEEecCCeEEECCe
Confidence 4799999999999999999886 4689999984 356655555544333333211000 0 1111
Q ss_pred --eeeCCCC----cc-ccccceEecCCCcCccchhhHHHhhhcCceEEEeCCC
Q 006671 487 --KYYDEAK----PW-NERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSN 532 (636)
Q Consensus 487 --~~i~~~e----il-~~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgAN 532 (636)
..+...+ .| +..|||++.|+ +.-.+.+.|+..++.|||.|.=+|-
T Consensus 73 ~i~v~~~~dp~~i~w~~~gvDiV~eat-g~~~s~e~a~~~l~~Gak~V~iSap 124 (337)
T 1rm4_O 73 VIKVVSDRNPVNLPWGDMGIDLVIEGT-GVFVDRDGAGKHLQAGAKKVLITAP 124 (337)
T ss_dssp EEEEECCSCGGGSCHHHHTCCEEEECS-SSCCBHHHHHHHHHTTCSEEEESSC
T ss_pred EEEEEecCChhhCcccccCCCEEEECC-CchhhHHHHHHHHHcCCEEEEECCc
Confidence 1112222 25 35899999986 5566788888888888888876654
No 108
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=95.39 E-value=0.02 Score=59.58 Aligned_cols=110 Identities=8% Similarity=0.101 Sum_probs=71.6
Q ss_pred CcEEEEecCccHHHH-HHHHHHHC-CCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeC-CC
Q 006671 416 GLRCVVSGSGKIAMH-VLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD-EA 492 (636)
Q Consensus 416 GkrVaIqGfGNVG~~-aAe~L~e~-GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~-~~ 492 (636)
-.||.|+|+|++|.. .+..|.+. +++|++|+|.+ .+++ . + .+++....+ -+
T Consensus 5 ~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~----------~~~~---~---~----------~~~~~~~~~~~~ 58 (358)
T 3gdo_A 5 TIKVGILGYGLSGSVFHGPLLDVLDEYQISKIMTSR----------TEEV---K---R----------DFPDAEVVHELE 58 (358)
T ss_dssp CEEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECSC----------HHHH---H---H----------HCTTSEEESSTH
T ss_pred cceEEEEccCHHHHHHHHHHHhhCCCeEEEEEEcCC----------HHHH---H---h----------hCCCCceECCHH
Confidence 468999999999985 67777664 89999999972 2221 1 1 122333332 24
Q ss_pred Cccc-cccceEecCCCcCccchhhHHHhhhcCceEEEeCCCCCCCHHHHH---HHHHCCceEec
Q 006671 493 KPWN-ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVD---VLKKANVLIAP 552 (636)
Q Consensus 493 eil~-~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~~---iL~~rGIlviP 552 (636)
+++. .++|+++-|. .+..+.+.+...++.|..++||=-=.....++.+ ..+++|+.+..
T Consensus 59 ~ll~~~~vD~V~i~t-p~~~H~~~~~~al~aGkhVl~EKPla~~~~e~~~l~~~a~~~g~~~~v 121 (358)
T 3gdo_A 59 EITNDPAIELVIVTT-PSGLHYEHTMACIQAGKHVVMEKPMTATAEEGETLKRAADEKGVLLSV 121 (358)
T ss_dssp HHHTCTTCCEEEECS-CTTTHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHHTCCEEE
T ss_pred HHhcCCCCCEEEEcC-CcHHHHHHHHHHHHcCCeEEEecCCcCCHHHHHHHHHHHHHcCCeEEE
Confidence 4554 5799999877 5567888888888899999999421112234443 33567776653
No 109
>3h9e_O Glyceraldehyde-3-phosphate dehydrogenase, testis-; oxidoreductase, structural genomics, structural genomics CON SGC, glycolysis, NAD; HET: NAD; 1.72A {Homo sapiens} PDB: 3pfw_O* 2vyn_D* 2vyv_D*
Probab=95.39 E-value=0.06 Score=57.13 Aligned_cols=104 Identities=16% Similarity=0.274 Sum_probs=68.7
Q ss_pred cEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccc------cCC--cee
Q 006671 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKT------YAR--SKY 488 (636)
Q Consensus 417 krVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~------~p~--a~~ 488 (636)
.||.|-|||.+|+.+++.+.+.|..||+|.|. -+|.+.+..|+++-...|++..-++. +.+ .+.
T Consensus 8 ~kvgInGFGRIGrlv~R~~~~~~veivainDp--------~~d~~~~a~l~~yDS~hG~f~~~v~~~~~~l~i~Gk~I~v 79 (346)
T 3h9e_O 8 LTVGINGFGRIGRLVLRACMEKGVKVVAVNDP--------FIDPEYMVYMFKYDSTHGRYKGSVEFRNGQLVVDNHEISV 79 (346)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEECT--------TCCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEE
T ss_pred eEEEEECCChHHHHHHHHHHhCCCEEEEEeCC--------CCChhHhcccccccCCCCCCCCcEEEcCCEEEECCEEEEE
Confidence 58999999999999999999999999999875 13667666665554444443321110 111 111
Q ss_pred e---CCCC-cc-ccccceEecCCCcCccchhhHHHhhhcCce-EEEe
Q 006671 489 Y---DEAK-PW-NERCDVAFPCASQNEIDQSDAINLVNSGCR-ILVE 529 (636)
Q Consensus 489 i---~~~e-il-~~~cDIliPcA~~n~It~enA~~l~~~~ak-iVvE 529 (636)
. ++++ .| +..+|+++.|+ +...+.+-|+.-++.||| +|+-
T Consensus 80 ~~e~dp~~i~W~~~gvDiVlesT-G~f~s~e~a~~hl~aGAkkVVIs 125 (346)
T 3h9e_O 80 YQCKEPKQIPWRAVGSPYVVEST-GVYLSIQAASDHISAGAQRVVIS 125 (346)
T ss_dssp ECCSSGGGCCGGGGTSCEEEECS-SSCCSHHHHHHHHHTTCSEEEES
T ss_pred EecCChhhCCcccccccEEEEec-cccCCHHHHHHHHHcCCCEEEEC
Confidence 1 1112 35 35799999987 556688888887788884 5543
No 110
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=95.38 E-value=0.073 Score=56.01 Aligned_cols=106 Identities=11% Similarity=0.227 Sum_probs=65.4
Q ss_pred cEEEEecCccHHHHHHHHHHHC-CCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCcc-ccccc-------cCC--
Q 006671 417 LRCVVSGSGKIAMHVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLR-DYSKT-------YAR-- 485 (636)
Q Consensus 417 krVaIqGfGNVG~~aAe~L~e~-GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~-~y~~~-------~p~-- 485 (636)
.||+|.|||.+|+.+++.|.+. +..||+|.|+. .|.+.+..+.++....+.+. ...+. +.+
T Consensus 4 ikVgI~G~GrIGr~l~R~l~~~p~vevvaI~d~~--------~~~~~~~~ll~yds~~g~~~~~~v~~~~~~~l~~~g~~ 75 (337)
T 3e5r_O 4 IKIGINGFGRIGRLVARVALQSEDVELVAVNDPF--------ITTDYMTYMFKYDTVHGQWKHSDIKIKDSKTLLLGEKP 75 (337)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCSSEEEEEEECSS--------SCHHHHHHHHHCCTTTCCCCSSCEEESSSSEEEETTEE
T ss_pred eEEEEECcCHHHHHHHHHHhCCCCeEEEEEECCC--------CCHHHHHHhhcccccCCCCCCCcEEeecCCeeEECCeE
Confidence 4899999999999999999886 78999999841 14443333332222223322 11000 000
Q ss_pred ceee---CCCCc-c-ccccceEecCCCcCccchhhHHHhhhcCce-EEEeCC
Q 006671 486 SKYY---DEAKP-W-NERCDVAFPCASQNEIDQSDAINLVNSGCR-ILVEGS 531 (636)
Q Consensus 486 a~~i---~~~ei-l-~~~cDIliPcA~~n~It~enA~~l~~~~ak-iVvEgA 531 (636)
...+ +++++ | +.+||+++.|+. ...+.+.|...++.|+| +|++..
T Consensus 76 i~v~~~~dp~~l~w~~~~vDvV~eaTg-~~~~~e~a~~~l~aGak~VVIs~p 126 (337)
T 3e5r_O 76 VTVFGIRNPDEIPWAEAGAEYVVESTG-VFTDKEKAAAHLKGGAKKVVISAP 126 (337)
T ss_dssp EEEECCSCGGGCCHHHHTCSEEEECSS-SCCSHHHHTHHHHTTCSEEEESSC
T ss_pred EEEEecCChHHccccccCCCEEEECCC-chhhHHHHHHHHHcCCCEEEEecC
Confidence 1112 22333 5 358999999875 45677888888888884 777653
No 111
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=95.38 E-value=0.058 Score=59.68 Aligned_cols=92 Identities=12% Similarity=0.128 Sum_probs=57.6
Q ss_pred CCCCCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeC
Q 006671 411 NKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD 490 (636)
Q Consensus 411 g~~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~ 490 (636)
+..+.|++|.|.|+|.||..+|+.|...|++|+ +.|. +...+... +. . +++.++
T Consensus 269 ~~~l~GktV~IiG~G~IG~~~A~~lka~Ga~Vi-v~d~----------~~~~~~~A---~~-~-----------Ga~~~~ 322 (494)
T 3ce6_A 269 DALIGGKKVLICGYGDVGKGCAEAMKGQGARVS-VTEI----------DPINALQA---MM-E-----------GFDVVT 322 (494)
T ss_dssp CCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEE-EECS----------CHHHHHHH---HH-T-----------TCEECC
T ss_pred CCCCCcCEEEEEccCHHHHHHHHHHHHCCCEEE-EEeC----------CHHHHHHH---HH-c-----------CCEEec
Confidence 457899999999999999999999999999854 5554 22222111 11 1 122222
Q ss_pred CCCccccccceEecCCC-cCccchhhHHHhhhcCceEEEeC
Q 006671 491 EAKPWNERCDVAFPCAS-QNEIDQSDAINLVNSGCRILVEG 530 (636)
Q Consensus 491 ~~eil~~~cDIliPcA~-~n~It~enA~~l~~~~akiVvEg 530 (636)
.++++ ..+||++-|.. .+.|+.+....+ +.++.+|-=|
T Consensus 323 l~e~l-~~aDvVi~atgt~~~i~~~~l~~m-k~ggilvnvG 361 (494)
T 3ce6_A 323 VEEAI-GDADIVVTATGNKDIIMLEHIKAM-KDHAILGNIG 361 (494)
T ss_dssp HHHHG-GGCSEEEECSSSSCSBCHHHHHHS-CTTCEEEECS
T ss_pred HHHHH-hCCCEEEECCCCHHHHHHHHHHhc-CCCcEEEEeC
Confidence 12222 37999999874 345665555544 5567666433
No 112
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=95.36 E-value=0.039 Score=56.86 Aligned_cols=104 Identities=13% Similarity=0.116 Sum_probs=64.4
Q ss_pred CCCCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeCC
Q 006671 412 KELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE 491 (636)
Q Consensus 412 ~~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~~ 491 (636)
.++.|+||.|.|+|++|+.+|+.|...|.+|++. |.+. +-.+ ..+..+.
T Consensus 118 ~~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~-dr~~-----~~~~-------------------------~~~~~~~ 166 (290)
T 3gvx_A 118 TLLYGKALGILGYGGIGRRVAHLAKAFGMRVIAY-TRSS-----VDQN-------------------------VDVISES 166 (290)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHHTCEEEEE-CSSC-----CCTT-------------------------CSEECSS
T ss_pred eeeecchheeeccCchhHHHHHHHHhhCcEEEEE-eccc-----cccc-------------------------cccccCC
Confidence 4689999999999999999999999999997655 4311 1000 0011111
Q ss_pred -CCccccccceEecCCC-----cCccchhhHHHhhhcCceEEEeCCCCC-CCHHH-HHHHHHCCce
Q 006671 492 -AKPWNERCDVAFPCAS-----QNEIDQSDAINLVNSGCRILVEGSNMP-CTPEA-VDVLKKANVL 549 (636)
Q Consensus 492 -~eil~~~cDIliPcA~-----~n~It~enA~~l~~~~akiVvEgAN~P-~T~eA-~~iL~~rGIl 549 (636)
+++ -..|||++-|.. .+.|+.+....+ +.++ +|+.-+-++ +..+| .+.|++.+|.
T Consensus 167 l~el-l~~aDiV~l~~P~t~~t~~li~~~~l~~m-k~ga-ilIN~aRG~~vd~~aL~~aL~~g~i~ 229 (290)
T 3gvx_A 167 PADL-FRQSDFVLIAIPLTDKTRGMVNSRLLANA-RKNL-TIVNVARADVVSKPDMIGFLKERSDV 229 (290)
T ss_dssp HHHH-HHHCSEEEECCCCCTTTTTCBSHHHHTTC-CTTC-EEEECSCGGGBCHHHHHHHHHHCTTC
T ss_pred hHHH-hhccCeEEEEeeccccchhhhhHHHHhhh-hcCc-eEEEeehhcccCCcchhhhhhhccce
Confidence 111 237888877665 455655554444 3344 555566655 44444 5778887765
No 113
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=95.35 E-value=0.035 Score=57.19 Aligned_cols=94 Identities=16% Similarity=0.126 Sum_probs=53.7
Q ss_pred CCCCcEEEEecCccHHHHHHHHHHH--------CCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccC
Q 006671 413 ELKGLRCVVSGSGKIAMHVLEKLIA--------YGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYA 484 (636)
Q Consensus 413 ~l~GkrVaIqGfGNVG~~aAe~L~e--------~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p 484 (636)
+++-.||.|+|+|.+|+.-++.+.. .+++||+|+|. |++ .++.+ .++ |+
T Consensus 22 ~MkkirvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~-----~~~-----~a~~~---a~~----------~g 78 (393)
T 4fb5_A 22 SMKPLGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEA-----NAG-----LAEAR---AGE----------FG 78 (393)
T ss_dssp --CCCEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC-------T-----THHHH---HHH----------HT
T ss_pred CCCCccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECC-----CHH-----HHHHH---HHH----------hC
Confidence 3556799999999999865554432 37899999997 332 22111 111 11
Q ss_pred CceeeCC-CCcc-ccccceEecCCCcCccchhhHHHhhhcCceEEEeC
Q 006671 485 RSKYYDE-AKPW-NERCDVAFPCASQNEIDQSDAINLVNSGCRILVEG 530 (636)
Q Consensus 485 ~a~~i~~-~eil-~~~cDIliPcA~~n~It~enA~~l~~~~akiVvEg 530 (636)
..+..++ ++++ +.++|+++=|. .+..+.+.+...++.|..|+||=
T Consensus 79 ~~~~y~d~~ell~~~~iDaV~Iat-P~~~H~~~a~~al~aGkhVl~EK 125 (393)
T 4fb5_A 79 FEKATADWRALIADPEVDVVSVTT-PNQFHAEMAIAALEAGKHVWCEK 125 (393)
T ss_dssp CSEEESCHHHHHHCTTCCEEEECS-CGGGHHHHHHHHHHTTCEEEECS
T ss_pred CCeecCCHHHHhcCCCCcEEEECC-ChHHHHHHHHHHHhcCCeEEEcc
Confidence 1122222 3444 34577776655 34556666666666677777764
No 114
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=95.35 E-value=0.055 Score=56.65 Aligned_cols=35 Identities=26% Similarity=0.421 Sum_probs=31.8
Q ss_pred CCCCCCcEEEEecCccHHHHHHHHHHHCCCEEEEE
Q 006671 411 NKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSV 445 (636)
Q Consensus 411 g~~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaV 445 (636)
+.++.|+||.|.|+|++|+.+|+.|...|.+|++.
T Consensus 135 ~~~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~ 169 (324)
T 3hg7_A 135 YQGLKGRTLLILGTGSIGQHIAHTGKHFGMKVLGV 169 (324)
T ss_dssp CCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEE
T ss_pred CcccccceEEEEEECHHHHHHHHHHHhCCCEEEEE
Confidence 35799999999999999999999999999997654
No 115
>2ep7_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase, structural genomics, NPPSFA; HET: NAD; 2.30A {Aquifex aeolicus}
Probab=95.35 E-value=0.033 Score=58.97 Aligned_cols=103 Identities=16% Similarity=0.283 Sum_probs=64.5
Q ss_pred cEEEEecCccHHHHHHHHHHHC-CCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccc------cCC--ce
Q 006671 417 LRCVVSGSGKIAMHVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKT------YAR--SK 487 (636)
Q Consensus 417 krVaIqGfGNVG~~aAe~L~e~-GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~------~p~--a~ 487 (636)
.+|+|-|||-+|+.+++.|.+. ...||+|.|. .|.+.+..|+++....|.+..-.+. +.+ .+
T Consensus 3 ikV~InGfGrIGr~v~r~l~~~~~~evvaInd~---------~~~~~~a~ll~yDs~hG~~~~~v~~~~~~l~v~Gk~i~ 73 (342)
T 2ep7_A 3 IKVGINGFGRIGRSFFRASWGREEIEIVAINDL---------TDAKHLAHLLKYDSVHGIFKGSVEAKDDSIVVDGKEIK 73 (342)
T ss_dssp CEEEEECCSHHHHHHHHHHTTCTTCEEEEEECS---------SCHHHHHHHHHEETTTEECSSCEEECSSEEEETTEEEE
T ss_pred eEEEEECCCHHHHHHHHHHHhCCCceEEEEecC---------CChHHHhhhhhcccccccCCCcEEEcCCEEEECCEEEE
Confidence 4899999999999999999876 6899999984 2555554454443333322111000 001 11
Q ss_pred eeC---CCC-cc-ccccceEecCCCcCccchhhHHHhhhcCce-EEEe
Q 006671 488 YYD---EAK-PW-NERCDVAFPCASQNEIDQSDAINLVNSGCR-ILVE 529 (636)
Q Consensus 488 ~i~---~~e-il-~~~cDIliPcA~~n~It~enA~~l~~~~ak-iVvE 529 (636)
.+. +++ .| +..+||++.|+ +...+.+.|+..++.||| +|+-
T Consensus 74 v~~~~dp~~~~w~~~gvDiV~est-G~~~s~e~a~~hl~aGakkVvis 120 (342)
T 2ep7_A 74 VFAQKDPSQIPWGDLGVDVVIEAT-GVFRDRENASKHLQGGAKKVIIT 120 (342)
T ss_dssp EECCSSGGGCCHHHHTCSEEEECS-SSCCBHHHHTTTGGGTCSEEEES
T ss_pred EEEcCChhhCCccccCCCEEEECC-CchhhhhhhHHHHhcCCCEEEec
Confidence 111 111 35 35899999986 556788888888888886 4443
No 116
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=95.34 E-value=0.11 Score=52.68 Aligned_cols=137 Identities=15% Similarity=0.073 Sum_probs=76.3
Q ss_pred CcchhHHHHHHHHHHHHhCCCCCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhh
Q 006671 393 EATGYGLVFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQ 472 (636)
Q Consensus 393 eATG~GV~~~~~~~l~~~g~~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~ 472 (636)
.-++.|+...+++ .+.+++|++++|.|.|.+|..+|+.|.+.| + |.|.|. +.+++..+.+....
T Consensus 109 nTd~~G~~~~L~~----~~~~l~~k~vlV~GaGgiG~aia~~L~~~G-~-V~v~~r----------~~~~~~~l~~~~~~ 172 (287)
T 1nvt_A 109 NTDGIGARMALEE----EIGRVKDKNIVIYGAGGAARAVAFELAKDN-N-IIIANR----------TVEKAEALAKEIAE 172 (287)
T ss_dssp CCHHHHHHHHHHH----HHCCCCSCEEEEECCSHHHHHHHHHHTSSS-E-EEEECS----------SHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHH----hCCCcCCCEEEEECchHHHHHHHHHHHHCC-C-EEEEEC----------CHHHHHHHHHHHhh
Confidence 3477887777653 456889999999999999999999999999 7 566776 22333223221111
Q ss_pred cCCccccccccCCceeeCCCCccccccceEecCCCcCccch---h---hHHHhhhcCceEEEeCCCCC-CCHHHHHHHHH
Q 006671 473 QRSLRDYSKTYARSKYYDEAKPWNERCDVAFPCASQNEIDQ---S---DAINLVNSGCRILVEGSNMP-CTPEAVDVLKK 545 (636)
Q Consensus 473 ~g~l~~y~~~~p~a~~i~~~eil~~~cDIliPcA~~n~It~---e---nA~~l~~~~akiVvEgAN~P-~T~eA~~iL~~ 545 (636)
.+..... . .....+-.+.+ .++||+|-|+.-..... . +...+ + .-.+|++-.-+| .|+ -.+..++
T Consensus 173 ~~~~~~~---~-~~d~~~~~~~~-~~~DilVn~ag~~~~~~~~~~~~~~~~~l-~-~~~~v~Dv~y~p~~t~-ll~~a~~ 244 (287)
T 1nvt_A 173 KLNKKFG---E-EVKFSGLDVDL-DGVDIIINATPIGMYPNIDVEPIVKAEKL-R-EDMVVMDLIYNPLETV-LLKEAKK 244 (287)
T ss_dssp HHTCCHH---H-HEEEECTTCCC-TTCCEEEECSCTTCTTCCSSCCSSCSTTC-C-SSSEEEECCCSSSSCH-HHHHHHT
T ss_pred hcccccc---e-eEEEeeHHHhh-CCCCEEEECCCCCCCCCCCCCCCCCHHHc-C-CCCEEEEeeeCCccCH-HHHHHHH
Confidence 0000000 0 01111111222 37899999886443210 0 11122 1 235677776566 454 3345577
Q ss_pred CCceEecc
Q 006671 546 ANVLIAPA 553 (636)
Q Consensus 546 rGIlviPD 553 (636)
+|+.+++.
T Consensus 245 ~G~~~~~G 252 (287)
T 1nvt_A 245 VNAKTING 252 (287)
T ss_dssp TTCEEECT
T ss_pred CCCEEeCc
Confidence 78765543
No 117
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=95.33 E-value=0.05 Score=56.66 Aligned_cols=112 Identities=9% Similarity=0.053 Sum_probs=73.4
Q ss_pred CCcEEEEecCccHHHH-HHHHHHHC-CCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeCC-
Q 006671 415 KGLRCVVSGSGKIAMH-VLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE- 491 (636)
Q Consensus 415 ~GkrVaIqGfGNVG~~-aAe~L~e~-GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~~- 491 (636)
+-.||.|+|+|++|.. .+..|.+. ++.|++|+|.+ ++-+ .+.+++....++
T Consensus 4 ~~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~-----~~~~---------------------~~~~~~~~~~~~~ 57 (362)
T 3fhl_A 4 EIIKTGLAAFGMSGQVFHAPFISTNPHFELYKIVERS-----KELS---------------------KERYPQASIVRSF 57 (362)
T ss_dssp CCEEEEESCCSHHHHHTTHHHHHHCTTEEEEEEECSS-----CCGG---------------------GTTCTTSEEESCS
T ss_pred CceEEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCC-----HHHH---------------------HHhCCCCceECCH
Confidence 4469999999999986 67777665 89999999983 3210 011233443333
Q ss_pred CCccc-cccceEecCCCcCccchhhHHHhhhcCceEEEeCCCCCCCHHHHHH---HHHCCceEecc
Q 006671 492 AKPWN-ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDV---LKKANVLIAPA 553 (636)
Q Consensus 492 ~eil~-~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~~i---L~~rGIlviPD 553 (636)
++++. .++|+++-|.. +..+.+.+...++.|..++||=-=.....+++++ .+++|+.+...
T Consensus 58 ~~ll~~~~vD~V~i~tp-~~~H~~~~~~al~aGkhVl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~ 122 (362)
T 3fhl_A 58 KELTEDPEIDLIVVNTP-DNTHYEYAGMALEAGKNVVVEKPFTSTTKQGEELIALAKKKGLMLSVY 122 (362)
T ss_dssp HHHHTCTTCCEEEECSC-GGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHhcCCCCCEEEEeCC-hHHHHHHHHHHHHCCCeEEEecCCCCCHHHHHHHHHHHHHcCCEEEEE
Confidence 44554 46999998864 5678888888888999999995211123345443 35667766533
No 118
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=95.33 E-value=0.036 Score=56.95 Aligned_cols=112 Identities=11% Similarity=0.167 Sum_probs=65.1
Q ss_pred CCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeCCCC
Q 006671 414 LKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAK 493 (636)
Q Consensus 414 l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~~~e 493 (636)
...++|.|.|+|++|..+|+.|.+.|..| .+.|. +.++++.+. +. ++...+.-+
T Consensus 29 ~~~~~I~iIG~G~mG~~~a~~l~~~G~~V-~~~dr----------~~~~~~~l~---~~------------g~~~~~~~~ 82 (320)
T 4dll_A 29 PYARKITFLGTGSMGLPMARRLCEAGYAL-QVWNR----------TPARAASLA---AL------------GATIHEQAR 82 (320)
T ss_dssp CCCSEEEEECCTTTHHHHHHHHHHTTCEE-EEECS----------CHHHHHHHH---TT------------TCEEESSHH
T ss_pred cCCCEEEEECccHHHHHHHHHHHhCCCeE-EEEcC----------CHHHHHHHH---HC------------CCEeeCCHH
Confidence 45679999999999999999999999985 45565 333432221 11 122221111
Q ss_pred ccccccceEecCCCcCccchhhHH--Hhh---hcCceEEEeCCCC-C-CCHHHHHHHHHCCceEec
Q 006671 494 PWNERCDVAFPCASQNEIDQSDAI--NLV---NSGCRILVEGSNM-P-CTPEAVDVLKKANVLIAP 552 (636)
Q Consensus 494 il~~~cDIliPcA~~n~It~enA~--~l~---~~~akiVvEgAN~-P-~T~eA~~iL~~rGIlviP 552 (636)
-.-.+|||+|-|........+... .+. ..++ +|+.-.+. | ++.+..+.+.++|+.|+.
T Consensus 83 e~~~~aDvVi~~vp~~~~~~~v~~~~~~~~~l~~~~-~vi~~st~~~~~~~~~~~~~~~~g~~~~~ 147 (320)
T 4dll_A 83 AAARDADIVVSMLENGAVVQDVLFAQGVAAAMKPGS-LFLDMASITPREARDHAARLGALGIAHLD 147 (320)
T ss_dssp HHHTTCSEEEECCSSHHHHHHHHTTTCHHHHCCTTC-EEEECSCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHhcCCEEEEECCCHHHHHHHHcchhHHhhCCCCC-EEEecCCCCHHHHHHHHHHHHHcCCEEEe
Confidence 112378999988875432222221 121 2244 45555554 3 334455778889998763
No 119
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=95.31 E-value=0.042 Score=56.40 Aligned_cols=113 Identities=19% Similarity=0.207 Sum_probs=70.0
Q ss_pred CCcEEEEecCccHHHHHHHHHHHC-CCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceee-CCC
Q 006671 415 KGLRCVVSGSGKIAMHVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYY-DEA 492 (636)
Q Consensus 415 ~GkrVaIqGfGNVG~~aAe~L~e~-GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i-~~~ 492 (636)
+-.||.|+|+|++|...++.|.+. ++.+++|+|. +++-.. .+.+.++..+.. +.+
T Consensus 4 ~~~rigiiG~G~ig~~~~~~l~~~~~~~~~av~d~-----~~~~~~------------------~~a~~~~~~~~~~~~~ 60 (329)
T 3evn_A 4 SKVRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSR-----TLESAQ------------------AFANKYHLPKAYDKLE 60 (329)
T ss_dssp -CEEEEEEBCCTTHHHHHHHHHHHCSEEEEEEECS-----CSSTTC------------------C---CCCCSCEESCHH
T ss_pred CceEEEEEechHHHHHHHHHHHhCCCcEEEEEEcC-----CHHHHH------------------HHHHHcCCCcccCCHH
Confidence 346899999999999888888764 6789999997 333221 111112111122 223
Q ss_pred Cccc-cccceEecCCCcCccchhhHHHhhhcCceEEEeCCCCCCCHHHHH---HHHHCCceEe
Q 006671 493 KPWN-ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVD---VLKKANVLIA 551 (636)
Q Consensus 493 eil~-~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~~---iL~~rGIlvi 551 (636)
+++. .++|+++-|. .+..+.+.+...++.|..++||=-=.....++.+ ..+++|+.+.
T Consensus 61 ~ll~~~~~D~V~i~t-p~~~h~~~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~ 122 (329)
T 3evn_A 61 DMLADESIDVIYVAT-INQDHYKVAKAALLAGKHVLVEKPFTLTYDQANELFALAESCNLFLM 122 (329)
T ss_dssp HHHTCTTCCEEEECS-CGGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHTTCCEE
T ss_pred HHhcCCCCCEEEECC-CcHHHHHHHHHHHHCCCeEEEccCCcCCHHHHHHHHHHHHHcCCEEE
Confidence 4443 4789998765 4566788888888889999999521112234443 3467777554
No 120
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=95.31 E-value=0.054 Score=59.74 Aligned_cols=97 Identities=10% Similarity=0.149 Sum_probs=60.4
Q ss_pred hCCCCCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceee
Q 006671 410 MNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYY 489 (636)
Q Consensus 410 ~g~~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i 489 (636)
.+..+.|++|.|.|+|+||+.+|+.|...|++|+ +.|. + .... +. ... . +.+..
T Consensus 251 ~~~~l~GktVgIIG~G~IG~~vA~~l~~~G~~Vi-v~d~-------~---~~~~--~~-a~~-~-----------g~~~~ 304 (479)
T 1v8b_A 251 TDFLISGKIVVICGYGDVGKGCASSMKGLGARVY-ITEI-------D---PICA--IQ-AVM-E-----------GFNVV 304 (479)
T ss_dssp HCCCCTTSEEEEECCSHHHHHHHHHHHHHTCEEE-EECS-------C---HHHH--HH-HHT-T-----------TCEEC
T ss_pred cccccCCCEEEEEeeCHHHHHHHHHHHhCcCEEE-EEeC-------C---hhhH--HH-HHH-c-----------CCEec
Confidence 4678999999999999999999999999999954 4444 2 2111 00 000 0 11222
Q ss_pred CCCCccccccceEecC-CCcCccchhhHHHhhhcCceEEEeCCCCCC
Q 006671 490 DEAKPWNERCDVAFPC-ASQNEIDQSDAINLVNSGCRILVEGSNMPC 535 (636)
Q Consensus 490 ~~~eil~~~cDIliPc-A~~n~It~enA~~l~~~~akiVvEgAN~P~ 535 (636)
+-++++ ..|||++-| .+.+.|+.+....+ +.++- |+--+-+++
T Consensus 305 ~l~ell-~~aDiVi~~~~t~~lI~~~~l~~M-K~gai-liNvgrg~~ 348 (479)
T 1v8b_A 305 TLDEIV-DKGDFFITCTGNVDVIKLEHLLKM-KNNAV-VGNIGHFDD 348 (479)
T ss_dssp CHHHHT-TTCSEEEECCSSSSSBCHHHHTTC-CTTCE-EEECSSTTT
T ss_pred CHHHHH-hcCCEEEECCChhhhcCHHHHhhc-CCCcE-EEEeCCCCc
Confidence 212222 379999988 45677887665554 33554 444555544
No 121
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=95.29 E-value=0.16 Score=53.00 Aligned_cols=109 Identities=10% Similarity=0.112 Sum_probs=64.7
Q ss_pred CCCCCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeC
Q 006671 411 NKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD 490 (636)
Q Consensus 411 g~~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~ 490 (636)
+.++.|++|.|.|+|++|+.+|+.|...|.+|+ +.|.+ ++ .+. ..+ + +..+.+
T Consensus 145 ~~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~-~~d~~-----~~---~~~---~~~----------~-----g~~~~~ 197 (334)
T 2dbq_A 145 GYDVYGKTIGIIGLGRIGQAIAKRAKGFNMRIL-YYSRT-----RK---EEV---ERE----------L-----NAEFKP 197 (334)
T ss_dssp CCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEE-EECSS-----CC---HHH---HHH----------H-----CCEECC
T ss_pred ccCCCCCEEEEEccCHHHHHHHHHHHhCCCEEE-EECCC-----cc---hhh---Hhh----------c-----CcccCC
Confidence 457999999999999999999999999999965 44541 21 111 111 0 112211
Q ss_pred CCCccccccceEecCCCcC-----ccchhhHHHhhhcCceEEEeCCCCC-CCHHH-HHHHHHCCce
Q 006671 491 EAKPWNERCDVAFPCASQN-----EIDQSDAINLVNSGCRILVEGSNMP-CTPEA-VDVLKKANVL 549 (636)
Q Consensus 491 ~~eil~~~cDIliPcA~~n-----~It~enA~~l~~~~akiVvEgAN~P-~T~eA-~~iL~~rGIl 549 (636)
.++++ .+||+++-|...+ .++.+....+ +.++-+ +--+.++ ++.++ .+.|.+.+|.
T Consensus 198 l~~~l-~~aDvVil~vp~~~~t~~~i~~~~~~~m-k~~ail-In~srg~~v~~~aL~~aL~~~~i~ 260 (334)
T 2dbq_A 198 LEDLL-RESDFVVLAVPLTRETYHLINEERLKLM-KKTAIL-INIARGKVVDTNALVKALKEGWIA 260 (334)
T ss_dssp HHHHH-HHCSEEEECCCCCTTTTTCBCHHHHHHS-CTTCEE-EECSCGGGBCHHHHHHHHHHTSSS
T ss_pred HHHHH-hhCCEEEECCCCChHHHHhhCHHHHhcC-CCCcEE-EECCCCcccCHHHHHHHHHhCCee
Confidence 11222 3799998877544 4444433333 334544 5566666 44444 4677776553
No 122
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=95.29 E-value=0.05 Score=54.85 Aligned_cols=115 Identities=14% Similarity=0.177 Sum_probs=66.7
Q ss_pred cEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeCC-CCcc
Q 006671 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE-AKPW 495 (636)
Q Consensus 417 krVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~~-~eil 495 (636)
++|.|.|+|++|..+|+.|.+.|..| .+.|. +.+.++.+. +. +....+. .+.
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V-~~~d~----------~~~~~~~~~---~~------------g~~~~~~~~~~- 56 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLL-NVFDL----------VQSAVDGLV---AA------------GASAARSARDA- 56 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEE-EEECS----------SHHHHHHHH---HT------------TCEECSSHHHH-
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeE-EEEcC----------CHHHHHHHH---HC------------CCeEcCCHHHH-
Confidence 58999999999999999999999985 45565 233433222 11 1111111 111
Q ss_pred ccccceEecCCCcCccchhhHH---Hhh---hcCceEEEeCCCCC-CC-HHHHHHHHHCCceEecccccccccc
Q 006671 496 NERCDVAFPCASQNEIDQSDAI---NLV---NSGCRILVEGSNMP-CT-PEAVDVLKKANVLIAPAMAAGAGGV 561 (636)
Q Consensus 496 ~~~cDIliPcA~~n~It~enA~---~l~---~~~akiVvEgAN~P-~T-~eA~~iL~~rGIlviPD~~aNAGGV 561 (636)
-.+||++|-|........+... .+. ..+ ++|+.-.+.+ .+ .+..+.+.++|+.|+.- -+.||.
T Consensus 57 ~~~aDvvi~~vp~~~~~~~v~~~~~~~~~~l~~~-~~vi~~st~~~~~~~~l~~~~~~~g~~~~~~--pv~~~~ 127 (302)
T 2h78_A 57 VQGADVVISMLPASQHVEGLYLDDDGLLAHIAPG-TLVLECSTIAPTSARKIHAAARERGLAMLDA--PVSGGT 127 (302)
T ss_dssp HTTCSEEEECCSCHHHHHHHHHSSSCGGGSSCSS-CEEEECSCCCHHHHHHHHHHHHHTTCCEEEC--CEESCH
T ss_pred HhCCCeEEEECCCHHHHHHHHcCchhHHhcCCCC-cEEEECCCCCHHHHHHHHHHHHHcCCEEEEE--EccCCh
Confidence 2368999998865433232222 221 223 3555555544 33 34567788889887742 455544
No 123
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=95.28 E-value=0.12 Score=57.15 Aligned_cols=40 Identities=23% Similarity=0.257 Sum_probs=35.1
Q ss_pred HHhCCCCCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeCC
Q 006671 408 ADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (636)
Q Consensus 408 ~~~g~~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs 448 (636)
+..+..+.|++|+|.|+|.+|..+|+.|...|++| .++|.
T Consensus 257 r~tg~~L~GKtVvVtGaGgIG~aiA~~Laa~GA~V-iv~D~ 296 (488)
T 3ond_A 257 RATDVMIAGKVAVVAGYGDVGKGCAAALKQAGARV-IVTEI 296 (488)
T ss_dssp HHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEE-EEECS
T ss_pred HHcCCcccCCEEEEECCCHHHHHHHHHHHHCCCEE-EEEcC
Confidence 44677899999999999999999999999999985 55665
No 124
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=95.28 E-value=0.046 Score=56.03 Aligned_cols=107 Identities=14% Similarity=0.100 Sum_probs=62.9
Q ss_pred cEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeCCCCccc
Q 006671 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKPWN 496 (636)
Q Consensus 417 krVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~~~eil~ 496 (636)
+||.++|+|++|...|+.|.+.|..| .+-|. +++ +++ .+.+ -+++..+.-.-+-
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~G~~V-~v~dr-----~~~-----~~~----------~l~~-----~G~~~~~s~~e~~ 59 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEAGYEL-VVWNR-----TAS-----KAE----------PLTK-----LGATVVENAIDAI 59 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEE-EEC-----------------C----------TTTT-----TTCEECSSGGGGC
T ss_pred CcEEEEecHHHHHHHHHHHHHCCCeE-EEEeC-----CHH-----HHH----------HHHH-----cCCeEeCCHHHHH
Confidence 58999999999999999999999995 45554 221 110 1111 1333332211123
Q ss_pred cccceEecCCCcCc-----cchhhHHHhhhcCceEEEeCCC-CC-CCHHHHHHHHHCCceEe
Q 006671 497 ERCDVAFPCASQNE-----IDQSDAINLVNSGCRILVEGSN-MP-CTPEAVDVLKKANVLIA 551 (636)
Q Consensus 497 ~~cDIliPcA~~n~-----It~enA~~l~~~~akiVvEgAN-~P-~T~eA~~iL~~rGIlvi 551 (636)
.+|||+|-|-.... +..+-+..+ . .-.+|+...+ .| +|.+..+.+.++|+.|+
T Consensus 60 ~~~dvvi~~l~~~~~~~~v~~~~~~~~~-~-~~~iiid~sT~~p~~~~~~~~~~~~~g~~~l 119 (297)
T 4gbj_A 60 TPGGIVFSVLADDAAVEELFSMELVEKL-G-KDGVHVSMSTISPETSRQLAQVHEWYGAHYV 119 (297)
T ss_dssp CTTCEEEECCSSHHHHHHHSCHHHHHHH-C-TTCEEEECSCCCHHHHHHHHHHHHHTTCEEE
T ss_pred hcCCceeeeccchhhHHHHHHHHHHhhc-C-CCeEEEECCCCChHHHHHHHHHHHhcCCcee
Confidence 47899988766432 222222222 1 3346666666 44 45666788999999887
No 125
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=95.28 E-value=0.13 Score=54.14 Aligned_cols=151 Identities=16% Similarity=0.142 Sum_probs=72.8
Q ss_pred CCCCCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeC
Q 006671 411 NKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD 490 (636)
Q Consensus 411 g~~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~ 490 (636)
+.++.|+||.|.|+|++|+.+|+.|...|.+|+ +.|.+.. ... +..+..
T Consensus 166 ~~~l~gktiGIIGlG~IG~~vA~~l~~~G~~V~-~~dr~~~----~~~--------------------------~~~~~~ 214 (340)
T 4dgs_A 166 GHSPKGKRIGVLGLGQIGRALASRAEAFGMSVR-YWNRSTL----SGV--------------------------DWIAHQ 214 (340)
T ss_dssp CCCCTTCEEEEECCSHHHHHHHHHHHTTTCEEE-EECSSCC----TTS--------------------------CCEECS
T ss_pred cccccCCEEEEECCCHHHHHHHHHHHHCCCEEE-EEcCCcc----ccc--------------------------CceecC
Confidence 568999999999999999999999999999965 4444110 000 011111
Q ss_pred -CCCccccccceEecCCC-----cCccchhhHHHhhhcCceEEEeCCCCCC-CHHH-HHHHHHCCce-Eecccccccccc
Q 006671 491 -EAKPWNERCDVAFPCAS-----QNEIDQSDAINLVNSGCRILVEGSNMPC-TPEA-VDVLKKANVL-IAPAMAAGAGGV 561 (636)
Q Consensus 491 -~~eil~~~cDIliPcA~-----~n~It~enA~~l~~~~akiVvEgAN~P~-T~eA-~~iL~~rGIl-viPD~~aNAGGV 561 (636)
.+++ -..|||++-|.. .+.|+.+....+ +.++ +++..|.+++ +.+| .+.|++..|. .+=|...+=--.
T Consensus 215 sl~el-l~~aDvVil~vP~t~~t~~li~~~~l~~m-k~ga-ilIN~aRG~vvde~aL~~aL~~g~i~gA~LDVf~~EP~~ 291 (340)
T 4dgs_A 215 SPVDL-ARDSDVLAVCVAASAATQNIVDASLLQAL-GPEG-IVVNVARGNVVDEDALIEALKSGTIAGAGLDVFVNEPAI 291 (340)
T ss_dssp SHHHH-HHTCSEEEECC----------CHHHHHHT-TTTC-EEEECSCC--------------CCSSEEEESCCSSSSSC
T ss_pred CHHHH-HhcCCEEEEeCCCCHHHHHHhhHHHHhcC-CCCC-EEEECCCCcccCHHHHHHHHHcCCceEEEeCCcCCCCCC
Confidence 1112 236888877765 455665555544 2233 5666777764 3333 4667666554 233443322211
Q ss_pred eeecchhccc---cCCCCCCHHHHHHHHHHHHHHHHHH
Q 006671 562 VAGELELNQE---CNMVHWSPEDFESKLQEAMKQTYQR 596 (636)
Q Consensus 562 ivS~~E~~qN---~~~~~ws~eeV~~rL~~~m~~~~~~ 596 (636)
. +.+--..| ..|+.|.-.+..+++.+.+.+.+.+
T Consensus 292 ~-~~L~~~~nvilTPHia~~t~e~~~~~~~~~~~nl~~ 328 (340)
T 4dgs_A 292 R-SEFHTTPNTVLMPHQGSATVETRMAMGKLVLANLAA 328 (340)
T ss_dssp C-SHHHHSSSEEECSSCSSCCHHHHHHHHHHHHHHHHH
T ss_pred c-cchhhCCCEEEcCcCCcCCHHHHHHHHHHHHHHHHH
Confidence 1 11100111 3466665555555554444443333
No 126
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=95.25 E-value=0.029 Score=56.33 Aligned_cols=108 Identities=13% Similarity=0.147 Sum_probs=62.2
Q ss_pred cEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeCC-CCcc
Q 006671 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE-AKPW 495 (636)
Q Consensus 417 krVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~~-~eil 495 (636)
++|.|.|+|++|..+|+.|.+.|..| .+.|. +++ +++.+. +. +....+. .+.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V-~~~dr-----~~~-----~~~~~~---~~------------g~~~~~~~~~~- 54 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSV-TIWNR-----SPE-----KAEELA---AL------------GAERAATPCEV- 54 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEE-EEECS-----SGG-----GGHHHH---HT------------TCEECSSHHHH-
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeE-EEEcC-----CHH-----HHHHHH---HC------------CCeecCCHHHH-
Confidence 68999999999999999999999985 46665 222 222121 11 1122111 111
Q ss_pred ccccceEecCCCcCccchhhH---HHh---hhcCceEEEeCCCC-CC-CHHHHHHHHHCCceEec
Q 006671 496 NERCDVAFPCASQNEIDQSDA---INL---VNSGCRILVEGSNM-PC-TPEAVDVLKKANVLIAP 552 (636)
Q Consensus 496 ~~~cDIliPcA~~n~It~enA---~~l---~~~~akiVvEgAN~-P~-T~eA~~iL~~rGIlviP 552 (636)
-.+||++|-|.....-..+.. ..+ ...++ +|+.-.+. |. +.+..+.+.++|+.|+.
T Consensus 55 ~~~aDvvi~~vp~~~~~~~v~~~~~~l~~~l~~~~-~vi~~st~~~~~~~~~~~~~~~~g~~~~~ 118 (287)
T 3pef_A 55 VESCPVTFAMLADPAAAEEVCFGKHGVLEGIGEGR-GYVDMSTVDPATSQRIGVAVVAKGGRFLE 118 (287)
T ss_dssp HHHCSEEEECCSSHHHHHHHHHSTTCHHHHCCTTC-EEEECSCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HhcCCEEEEEcCCHHHHHHHHcCcchHhhcCCCCC-EEEeCCCCCHHHHHHHHHHHHHhCCEEEE
Confidence 236899998887433222222 222 12344 44444443 33 34445678889998763
No 127
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=95.24 E-value=0.079 Score=49.31 Aligned_cols=117 Identities=13% Similarity=0.146 Sum_probs=63.6
Q ss_pred CCCCCcEEEEecCccHHHHHHHHHHHC-CCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeC
Q 006671 412 KELKGLRCVVSGSGKIAMHVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD 490 (636)
Q Consensus 412 ~~l~GkrVaIqGfGNVG~~aAe~L~e~-GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~ 490 (636)
.++.+.+|+|.|+|.+|..+|+.|.+. |..|+.+ |. |.+.+..+ +.. + +.-+.-.....+.+
T Consensus 35 ~~~~~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vi-d~----------~~~~~~~~---~~~-g-~~~~~gd~~~~~~l- 97 (183)
T 3c85_A 35 INPGHAQVLILGMGRIGTGAYDELRARYGKISLGI-EI----------REEAAQQH---RSE-G-RNVISGDATDPDFW- 97 (183)
T ss_dssp BCCTTCSEEEECCSHHHHHHHHHHHHHHCSCEEEE-ES----------CHHHHHHH---HHT-T-CCEEECCTTCHHHH-
T ss_pred cCCCCCcEEEECCCHHHHHHHHHHHhccCCeEEEE-EC----------CHHHHHHH---HHC-C-CCEEEcCCCCHHHH-
Confidence 356788999999999999999999999 9986654 43 23333222 211 1 10000000000000
Q ss_pred CCCc-cccccceEecCCCcCccchhhHHHhhh--cCceEEEeCCCCCCCHHHHHHHHHCCceE
Q 006671 491 EAKP-WNERCDVAFPCASQNEIDQSDAINLVN--SGCRILVEGSNMPCTPEAVDVLKKANVLI 550 (636)
Q Consensus 491 ~~ei-l~~~cDIliPcA~~n~It~enA~~l~~--~~akiVvEgAN~P~T~eA~~iL~~rGIlv 550 (636)
.+. --.++|++|-|......+..-+..+.. ...++|+-. | +++..+.|.+.|+-+
T Consensus 98 -~~~~~~~~ad~vi~~~~~~~~~~~~~~~~~~~~~~~~ii~~~-~---~~~~~~~l~~~G~~~ 155 (183)
T 3c85_A 98 -ERILDTGHVKLVLLAMPHHQGNQTALEQLQRRNYKGQIAAIA-E---YPDQLEGLLESGVDA 155 (183)
T ss_dssp -HTBCSCCCCCEEEECCSSHHHHHHHHHHHHHTTCCSEEEEEE-S---SHHHHHHHHHHTCSE
T ss_pred -HhccCCCCCCEEEEeCCChHHHHHHHHHHHHHCCCCEEEEEE-C---CHHHHHHHHHcCCCE
Confidence 011 013689999877644333322222211 146777753 3 356667888888743
No 128
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=95.23 E-value=0.033 Score=57.41 Aligned_cols=50 Identities=12% Similarity=0.082 Sum_probs=42.5
Q ss_pred CCcchhHHHHHHHHHHHHhCCCCCCcEEEEecCcc-HHHHHHHHHHHCCCEEEEEeCC
Q 006671 392 TEATGYGLVFFAQLILADMNKELKGLRCVVSGSGK-IAMHVLEKLIAYGAIPVSVSDA 448 (636)
Q Consensus 392 ~eATG~GV~~~~~~~l~~~g~~l~GkrVaIqGfGN-VG~~aAe~L~e~GAkVVaVSDs 448 (636)
...|.+|++..+++ .+ ++|++|+|.|.|+ ||..+|..|...|++ |+|+++
T Consensus 132 ~PcTp~gv~~lL~~----~~--l~Gk~vvVvG~s~iVG~plA~lL~~~gAt-Vtv~~~ 182 (276)
T 3ngx_A 132 VPATPRAVIDIMDY----YG--YHENTVTIVNRSPVVGRPLSMMLLNRNYT-VSVCHS 182 (276)
T ss_dssp CCHHHHHHHHHHHH----HT--CCSCEEEEECCCTTTHHHHHHHHHHTTCE-EEEECT
T ss_pred CCCcHHHHHHHHHH----hC--cCCCEEEEEcCChHHHHHHHHHHHHCCCe-EEEEeC
Confidence 46899998766554 45 9999999999986 899999999999999 678876
No 129
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=95.23 E-value=0.076 Score=55.28 Aligned_cols=108 Identities=14% Similarity=0.114 Sum_probs=65.9
Q ss_pred CCCCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeCC
Q 006671 412 KELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE 491 (636)
Q Consensus 412 ~~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~~ 491 (636)
.++.|+||.|.|+|++|+.+|+.|...|.+|++.+-+.. ..++++ .+ + +. .+-
T Consensus 135 ~~l~g~tvGIiG~G~IG~~vA~~l~~~G~~V~~~dr~~~---~~~~~~------------------~~---~-~~--~~l 187 (315)
T 3pp8_A 135 YTREEFSVGIMGAGVLGAKVAESLQAWGFPLRCWSRSRK---SWPGVE------------------SY---V-GR--EEL 187 (315)
T ss_dssp CCSTTCCEEEECCSHHHHHHHHHHHTTTCCEEEEESSCC---CCTTCE------------------EE---E-SH--HHH
T ss_pred CCcCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEcCCch---hhhhhh------------------hh---c-cc--CCH
Confidence 578999999999999999999999999999877654311 111211 00 0 00 000
Q ss_pred CCccccccceEecCCC-----cCccchhhHHHhhhcCceEEEeCCCCC-CCHHH-HHHHHHCCce
Q 006671 492 AKPWNERCDVAFPCAS-----QNEIDQSDAINLVNSGCRILVEGSNMP-CTPEA-VDVLKKANVL 549 (636)
Q Consensus 492 ~eil~~~cDIliPcA~-----~n~It~enA~~l~~~~akiVvEgAN~P-~T~eA-~~iL~~rGIl 549 (636)
++++ ..|||++-|.. .+.|+.+....+ +.+ .+++--|-++ +..+| .+.|++..|.
T Consensus 188 ~ell-~~aDiV~l~~Plt~~t~~li~~~~l~~m-k~g-ailIN~aRG~~vd~~aL~~aL~~g~i~ 249 (315)
T 3pp8_A 188 RAFL-NQTRVLINLLPNTAQTVGIINSELLDQL-PDG-AYVLNLARGVHVQEADLLAALDSGKLK 249 (315)
T ss_dssp HHHH-HTCSEEEECCCCCGGGTTCBSHHHHTTS-CTT-EEEEECSCGGGBCHHHHHHHHHHTSEE
T ss_pred HHHH-hhCCEEEEecCCchhhhhhccHHHHhhC-CCC-CEEEECCCChhhhHHHHHHHHHhCCcc
Confidence 1122 36888876654 455665554444 223 4666777777 44443 5777777664
No 130
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=95.21 E-value=0.044 Score=55.20 Aligned_cols=101 Identities=16% Similarity=0.115 Sum_probs=65.9
Q ss_pred cEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeC-CCCcc
Q 006671 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD-EAKPW 495 (636)
Q Consensus 417 krVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~-~~eil 495 (636)
.||+|.|+|++|+.+++.+.+.+..+|++.|.++.- +. +....+ -++++
T Consensus 4 mkI~ViGaGrMG~~i~~~l~~~~~eLva~~d~~~~~--~~----------------------------gv~v~~dl~~l~ 53 (243)
T 3qy9_A 4 MKILLIGYGAMNQRVARLAEEKGHEIVGVIENTPKA--TT----------------------------PYQQYQHIADVK 53 (243)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCC----C----------------------------CSCBCSCTTTCT
T ss_pred eEEEEECcCHHHHHHHHHHHhCCCEEEEEEecCccc--cC----------------------------CCceeCCHHHHh
Confidence 589999999999999999998766999999974320 00 111111 13344
Q ss_pred ccccceEecCCCcCccchhhHHHhhhcCceEEEeCCCCCCCHHHHHHHH----HCCceEeccc
Q 006671 496 NERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLK----KANVLIAPAM 554 (636)
Q Consensus 496 ~~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~~iL~----~rGIlviPD~ 554 (636)
++|++|-++..+... +++. ++.+..+|++-. ..|++-.+.|+ +.+|++.|.+
T Consensus 54 --~~DVvIDft~p~a~~-~~~~--l~~g~~vVigTT--G~s~e~~~~l~~aa~~~~v~~a~N~ 109 (243)
T 3qy9_A 54 --GADVAIDFSNPNLLF-PLLD--EDFHLPLVVATT--GEKEKLLNKLDELSQNMPVFFSANM 109 (243)
T ss_dssp --TCSEEEECSCHHHHH-HHHT--SCCCCCEEECCC--SSHHHHHHHHHHHTTTSEEEECSSC
T ss_pred --CCCEEEEeCChHHHH-HHHH--HhcCCceEeCCC--CCCHHHHHHHHHHHhcCCEEEECCc
Confidence 899999888766554 3444 577889998543 45665444443 3355666554
No 131
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=95.19 E-value=0.037 Score=60.43 Aligned_cols=161 Identities=14% Similarity=0.149 Sum_probs=94.7
Q ss_pred CCcEEEEecCccHHHHHHHHHHH----------CCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccC
Q 006671 415 KGLRCVVSGSGKIAMHVLEKLIA----------YGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYA 484 (636)
Q Consensus 415 ~GkrVaIqGfGNVG~~aAe~L~e----------~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p 484 (636)
+-.+|.|.|+|+||+.+++.|.+ .+.+|++|+|++ .++.. ... +
T Consensus 9 k~irIgIIG~G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d~~----------~~~~~---~~~-------------~ 62 (444)
T 3mtj_A 9 KPIHVGLLGLGTVGGGTLTVLRRNAEEITRRAGREIRVVRAAVRN----------LDKAE---ALA-------------G 62 (444)
T ss_dssp SCEEEEEECCHHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEECSC----------HHHHH---HHH-------------T
T ss_pred CcccEEEECCCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEECC----------HHHhh---hhc-------------c
Confidence 44689999999999999987764 467899999982 22211 110 1
Q ss_pred Cceee-CCCCcc-ccccceEecCCCcCccchhhHHHhhhcCceEEEeCCCCCC-CHHHH---HHHHHCCceEeccccccc
Q 006671 485 RSKYY-DEAKPW-NERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPC-TPEAV---DVLKKANVLIAPAMAAGA 558 (636)
Q Consensus 485 ~a~~i-~~~eil-~~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgAN~P~-T~eA~---~iL~~rGIlviPD~~aNA 558 (636)
+..+. +.++++ +.++|+++-|......+.+.+...++.|..+|+| |-.. ..++. +..+++|+.+. +-++.
T Consensus 63 ~~~~~~d~~ell~d~diDvVve~tp~~~~h~~~~~~AL~aGKhVvte--nkal~a~~~~eL~~~A~~~gv~l~--~Ea~V 138 (444)
T 3mtj_A 63 GLPLTTNPFDVVDDPEIDIVVELIGGLEPARELVMQAIANGKHVVTA--NKHLVAKYGNEIFAAAQAKGVMVT--FEAAV 138 (444)
T ss_dssp TCCEESCTHHHHTCTTCCEEEECCCSSTTHHHHHHHHHHTTCEEEEC--CHHHHHHHHHHHHHHHHHHTCCEE--CGGGS
T ss_pred cCcccCCHHHHhcCCCCCEEEEcCCCchHHHHHHHHHHHcCCEEEEC--CcccCHHHHHHHHHHHHHhCCeEE--EEEee
Confidence 11122 223444 3578999999877677888887778899999986 3222 22333 34467888775 33333
Q ss_pred ccceeecchhccccC---------C-CCCCHHHHHHHHHHHHHH---HHHHHHHHHHHcCCCCCC
Q 006671 559 GGVVAGELELNQECN---------M-VHWSPEDFESKLQEAMKQ---TYQRALKAATDFGYQKES 610 (636)
Q Consensus 559 GGVivS~~E~~qN~~---------~-~~ws~eeV~~rL~~~m~~---~~~~v~~~A~~~~~~~~~ 610 (636)
||-+=. +..+++.- + +..+-.-+ | ..|.+ .|++++..|++.|..+..
T Consensus 139 ~~giPi-i~~LrelL~~~~Ig~I~GIlnGT~nyi---l-t~m~~~g~~f~~~l~eAq~lGyaE~D 198 (444)
T 3mtj_A 139 AGGIPI-IKALREGLTANRIEWLAGIINGTSNFI---L-SEMRDKGAAFDDVLKEAQRLGYAEAD 198 (444)
T ss_dssp STTSCH-HHHHHTTTTTSCEEEEEEECCHHHHHH---H-HHHHHHCCCHHHHHHHHHHHTSSCSS
T ss_pred eCChHH-HHHHHHHHhCCCCceEEEEEcCCcccc---c-ccCCCCCCCHHHHHHHHHHcCCCcCC
Confidence 322111 11111110 0 00111122 2 34543 789999999999975433
No 132
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=95.18 E-value=0.15 Score=46.76 Aligned_cols=103 Identities=14% Similarity=0.121 Sum_probs=65.1
Q ss_pred CcEEEEecC----ccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeCC
Q 006671 416 GLRCVVSGS----GKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE 491 (636)
Q Consensus 416 GkrVaIqGf----GNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~~ 491 (636)
-++|+|+|. |++|..+++.|.+.|.+|..| ||++- ++ ..+.- |+..
T Consensus 22 p~~iaVVGas~~~g~~G~~~~~~l~~~G~~v~~V--------np~~~---~i----------~G~~~----y~sl----- 71 (144)
T 2d59_A 22 YKKIALVGASPKPERDANIVMKYLLEHGYDVYPV--------NPKYE---EV----------LGRKC----YPSV----- 71 (144)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEE--------CTTCS---EE----------TTEEC----BSSG-----
T ss_pred CCEEEEEccCCCCCchHHHHHHHHHHCCCEEEEE--------CCCCC---eE----------CCeec----cCCH-----
Confidence 468999999 799999999999999986555 33320 00 00111 1211
Q ss_pred CCccccccceEecCCCcCccchhhHHHhhhcCceEEEeCCCCCCCHHHHHHHHHCCceEe
Q 006671 492 AKPWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANVLIA 551 (636)
Q Consensus 492 ~eil~~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~~iL~~rGIlvi 551 (636)
+++ ..++|+.+-|... ....+-++.+++.+++.|+--.. -...+..+..+++|+.++
T Consensus 72 ~~l-~~~vDlvvi~vp~-~~~~~vv~~~~~~gi~~i~~~~g-~~~~~l~~~a~~~Gi~vv 128 (144)
T 2d59_A 72 LDI-PDKIEVVDLFVKP-KLTMEYVEQAIKKGAKVVWFQYN-TYNREASKKADEAGLIIV 128 (144)
T ss_dssp GGC-SSCCSEEEECSCH-HHHHHHHHHHHHHTCSEEEECTT-CCCHHHHHHHHHTTCEEE
T ss_pred HHc-CCCCCEEEEEeCH-HHHHHHHHHHHHcCCCEEEECCC-chHHHHHHHHHHcCCEEE
Confidence 111 1257877776543 33444455555668887775432 247788899999999877
No 133
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=95.16 E-value=0.055 Score=55.70 Aligned_cols=114 Identities=16% Similarity=0.098 Sum_probs=71.4
Q ss_pred CCCCcEEEEecCccHHHHHHHHHHHC-CCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeCC
Q 006671 413 ELKGLRCVVSGSGKIAMHVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE 491 (636)
Q Consensus 413 ~l~GkrVaIqGfGNVG~~aAe~L~e~-GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~~ 491 (636)
....++|.|.|.|++|...++.|.+. |.+-|.|.|. +.++...+. +..+. ..+..+.
T Consensus 132 ~~~~~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~dr----------~~~~~~~l~---~~~~~---------~~~~~~~ 189 (312)
T 2i99_A 132 PPSSEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNR----------TKENAEKFA---DTVQG---------EVRVCSS 189 (312)
T ss_dssp CTTCCEEEEECCSHHHHHHHHHHHHHCCCSEEEEECS----------SHHHHHHHH---HHSSS---------CCEECSS
T ss_pred CCCCcEEEEECCcHHHHHHHHHHHHhCCCcEEEEEcC----------CHHHHHHHH---HHhhC---------CeEEeCC
Confidence 35678999999999999999999876 8755777775 334432222 11110 0111111
Q ss_pred -CCccccccceEecCCCc--CccchhhHHHhhhcCceEEEeCCCCCCCHHHHHHHHHCCceEecc
Q 006671 492 -AKPWNERCDVAFPCASQ--NEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANVLIAPA 553 (636)
Q Consensus 492 -~eil~~~cDIliPcA~~--n~It~enA~~l~~~~akiVvEgAN~P~T~eA~~iL~~rGIlviPD 553 (636)
++.. .+|||++-|... ..+.. ..++.++.++.-|.+.|-+.+..+.+.++|+.|+-+
T Consensus 190 ~~e~v-~~aDiVi~atp~~~~v~~~----~~l~~g~~vi~~g~~~p~~~el~~~~~~~g~~~vD~ 249 (312)
T 2i99_A 190 VQEAV-AGADVIITVTLATEPILFG----EWVKPGAHINAVGASRPDWRELDDELMKEAVLYVDS 249 (312)
T ss_dssp HHHHH-TTCSEEEECCCCSSCCBCG----GGSCTTCEEEECCCCSTTCCSBCHHHHHHSEEEESC
T ss_pred HHHHH-hcCCEEEEEeCCCCcccCH----HHcCCCcEEEeCCCCCCCceeccHHHHhcCEEEECC
Confidence 1122 368999877653 23332 123457888888899887667667788889877654
No 134
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=95.12 E-value=0.061 Score=57.14 Aligned_cols=104 Identities=15% Similarity=0.264 Sum_probs=63.1
Q ss_pred cEEEEecCccHHHHHHHHHHHC-CCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccc------cCC--ce
Q 006671 417 LRCVVSGSGKIAMHVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKT------YAR--SK 487 (636)
Q Consensus 417 krVaIqGfGNVG~~aAe~L~e~-GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~------~p~--a~ 487 (636)
.+|+|.|||-+|+-+++.|.+. ...||+|.|.. .|.+.+..++++....+.+....+. +.+ .+
T Consensus 18 ikVgI~G~G~iGr~llR~l~~~p~veivaindp~--------~~~~~~a~ll~~ds~hg~~~~~v~~~~~~l~v~g~~i~ 89 (354)
T 3cps_A 18 GTLGINGFGRIGRLVLRACMERNDITVVAINDPF--------MDVEYMAYLLKYDSVHGNFNGTVEVSGKDLCINGKVVK 89 (354)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCSSCEEEEEECTT--------SCHHHHHHHHHCCTTTCSCSSCEEECC-CEEETTEEEE
T ss_pred eEEEEECCCHHHHHHHHHHHcCCCeEEEEecCCC--------CChhHhhhhhcccccCCCCCCcEEEeCCEEEECCeEEE
Confidence 4899999999999999999886 78999999831 1343332233332223333221100 001 11
Q ss_pred eeC---CCC-cc-ccccceEecCCCcCccchhhHHHhhhcCce-EEEe
Q 006671 488 YYD---EAK-PW-NERCDVAFPCASQNEIDQSDAINLVNSGCR-ILVE 529 (636)
Q Consensus 488 ~i~---~~e-il-~~~cDIliPcA~~n~It~enA~~l~~~~ak-iVvE 529 (636)
.+. +++ .| +..|||+|.|+ +.-.+.+.|...++.||| +|+.
T Consensus 90 v~~~~dp~~i~w~~~~vDvV~eat-g~~~s~e~a~~~l~~GakkvVId 136 (354)
T 3cps_A 90 VFQAKDPAEIPWGASGAQIVCEST-GVFTTEEKASLHLKGGAKKVIIS 136 (354)
T ss_dssp EECCSCGGGCCHHHHTCCEEEECS-SSCCSHHHHGGGGTTTCSEEEES
T ss_pred EEecCChHHCCcccCCCCEEEECC-CchhhHHHHHHHHHcCCcEEEEe
Confidence 222 222 35 36899999986 455677888888888884 4443
No 135
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=95.09 E-value=0.051 Score=59.06 Aligned_cols=120 Identities=12% Similarity=0.121 Sum_probs=70.1
Q ss_pred CCcEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeCC-C-
Q 006671 415 KGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE-A- 492 (636)
Q Consensus 415 ~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~~-~- 492 (636)
++++|+|.|.|.+|+.+++.|.+.|++ |.+.|. +.+++. ++....+.+... ... +.+ +
T Consensus 2 ~~k~VlViGaG~iG~~ia~~L~~~G~~-V~v~~R----------~~~~a~---~la~~~~~~~~~-----~~D-v~d~~~ 61 (450)
T 1ff9_A 2 ATKSVLMLGSGFVTRPTLDVLTDSGIK-VTVACR----------TLESAK---KLSAGVQHSTPI-----SLD-VNDDAA 61 (450)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHTTTCE-EEEEES----------SHHHHH---HTTTTCTTEEEE-----ECC-TTCHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcCE-EEEEEC----------CHHHHH---HHHHhcCCceEE-----Eee-cCCHHH
Confidence 578999999999999999999999998 566665 223321 111111111000 000 111 1
Q ss_pred --CccccccceEecCCCcCccchhhHHHhhhcCceEEEeCCCCCCCHHHHHHHHHCCceEeccccc
Q 006671 493 --KPWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANVLIAPAMAA 556 (636)
Q Consensus 493 --eil~~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~~iL~~rGIlviPD~~a 556 (636)
+++ .++|++|-|+... .+.+.+...++.+..++.+....|.+.+..+..+++|+.+++..-.
T Consensus 62 l~~~l-~~~DvVIn~a~~~-~~~~i~~a~l~~g~~vvd~~~~~~~~~~l~~aA~~aGv~~i~g~g~ 125 (450)
T 1ff9_A 62 LDAEV-AKHDLVISLIPYT-FHATVIKSAIRQKKHVVTTSYVSPAMMELDQAAKDAGITVMNEIGL 125 (450)
T ss_dssp HHHHH-TTSSEEEECCC---CHHHHHHHHHHHTCEEEESSCCCHHHHHTHHHHHHTTCEEECSCBB
T ss_pred HHHHH-cCCcEEEECCccc-cchHHHHHHHhCCCeEEEeecccHHHHHHHHHHHHCCCeEEeCCCC
Confidence 112 2799999999643 2333333334557888888554454444556678899988776544
No 136
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=95.08 E-value=0.079 Score=47.09 Aligned_cols=106 Identities=19% Similarity=0.241 Sum_probs=60.0
Q ss_pred CCcEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeCCCCc
Q 006671 415 KGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKP 494 (636)
Q Consensus 415 ~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~~~ei 494 (636)
..++|+|.|+|.+|+.+|+.|.+.|..|+.+ |. |.+.+..+ +.. + +.-+ +.+ .+..+.
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L~~~g~~V~~i-d~----------~~~~~~~~---~~~-~-~~~~---~gd---~~~~~~ 62 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVRELTAAGKKVLAV-DK----------SKEKIELL---EDE-G-FDAV---IAD---PTDESF 62 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCEEEE-ES----------CHHHHHHH---HHT-T-CEEE---ECC---TTCHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEE-EC----------CHHHHHHH---HHC-C-CcEE---ECC---CCCHHH
Confidence 4578999999999999999999999997654 43 33333222 221 1 1000 000 011112
Q ss_pred c----ccccceEecCCCcCccc---hhhHHHhhhcCceEEEeCCCCCCCHHHHHHHHHCCc
Q 006671 495 W----NERCDVAFPCASQNEID---QSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANV 548 (636)
Q Consensus 495 l----~~~cDIliPcA~~n~It---~enA~~l~~~~akiVvEgAN~P~T~eA~~iL~~rGI 548 (636)
| -.++|++|-|......+ ...++.+ ...++|+-.. +++..+.|++.|+
T Consensus 63 l~~~~~~~~d~vi~~~~~~~~n~~~~~~a~~~--~~~~iia~~~----~~~~~~~l~~~G~ 117 (141)
T 3llv_A 63 YRSLDLEGVSAVLITGSDDEFNLKILKALRSV--SDVYAIVRVS----SPKKKEEFEEAGA 117 (141)
T ss_dssp HHHSCCTTCSEEEECCSCHHHHHHHHHHHHHH--CCCCEEEEES----CGGGHHHHHHTTC
T ss_pred HHhCCcccCCEEEEecCCHHHHHHHHHHHHHh--CCceEEEEEc----ChhHHHHHHHcCC
Confidence 2 13789998877643333 2333333 1456666443 3455677888887
No 137
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=95.07 E-value=0.16 Score=45.65 Aligned_cols=106 Identities=14% Similarity=0.156 Sum_probs=63.2
Q ss_pred cEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeCCCCccc
Q 006671 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKPWN 496 (636)
Q Consensus 417 krVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~~~eil~ 496 (636)
.+|+|.|+|.+|+.+|+.|.+.|..|+.| |. |.+.+..+. . .+ +.-+ +.++ +..+.|.
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g~~v~vi-d~----------~~~~~~~~~---~-~g-~~~i---~gd~---~~~~~l~ 65 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASDIPLVVI-ET----------SRTRVDELR---E-RG-VRAV---LGNA---ANEEIMQ 65 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEE-ES----------CHHHHHHHH---H-TT-CEEE---ESCT---TSHHHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEE-EC----------CHHHHHHHH---H-cC-CCEE---ECCC---CCHHHHH
Confidence 47999999999999999999999996554 43 334432222 1 11 1000 0000 1111221
Q ss_pred ----cccceEecCCCcCccchh---hHHHhhhcCceEEEeCCCCCCCHHHHHHHHHCCce
Q 006671 497 ----ERCDVAFPCASQNEIDQS---DAINLVNSGCRILVEGSNMPCTPEAVDVLKKANVL 549 (636)
Q Consensus 497 ----~~cDIliPcA~~n~It~e---nA~~l~~~~akiVvEgAN~P~T~eA~~iL~~rGIl 549 (636)
.++|+++-|......+.. .+..+ .-.+++|+..- +++..+.|++.|+-
T Consensus 66 ~a~i~~ad~vi~~~~~~~~n~~~~~~a~~~-~~~~~iiar~~----~~~~~~~l~~~G~d 120 (140)
T 3fwz_A 66 LAHLECAKWLILTIPNGYEAGEIVASARAK-NPDIEIIARAH----YDDEVAYITERGAN 120 (140)
T ss_dssp HTTGGGCSEEEECCSCHHHHHHHHHHHHHH-CSSSEEEEEES----SHHHHHHHHHTTCS
T ss_pred hcCcccCCEEEEECCChHHHHHHHHHHHHH-CCCCeEEEEEC----CHHHHHHHHHCCCC
Confidence 378999988776544432 23332 23578888653 45677889999874
No 138
>2g82_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; G3PDH, glycolysis, oxidoreductase, NAD, rossmann fold; HET: NAD PGE; 1.65A {Thermus aquaticus} SCOP: c.2.1.3 d.81.1.1 PDB: 1cer_O* 1vc2_A*
Probab=95.06 E-value=0.056 Score=56.91 Aligned_cols=97 Identities=18% Similarity=0.221 Sum_probs=63.1
Q ss_pred EEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccc------cCC--ceee
Q 006671 418 RCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKT------YAR--SKYY 489 (636)
Q Consensus 418 rVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~------~p~--a~~i 489 (636)
+|+|.|||-+|+.+++.|.+....||+|.|. .|.+.+..|.+.....|.+...... +.+ .+..
T Consensus 2 kVgInG~G~IGr~vlr~l~~~~~evvaind~---------~~~~~~a~ll~~ds~~G~~~~~v~~~~~~l~v~g~~i~v~ 72 (331)
T 2g82_O 2 KVGINGFGRIGRQVFRILHSRGVEVALINDL---------TDNKTLAHLLKYDSIYHRFPGEVAYDDQYLYVDGKAIRAT 72 (331)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCEEEEECS---------SCHHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEEE
T ss_pred EEEEECcCHHHHHHHHHHHhCCCEEEEEecC---------CCHHHHhHhhhccccCCCCCceEEEcCCEEEECCEEEEEE
Confidence 7999999999999999998778899999984 2566655555443333432211100 011 1122
Q ss_pred ---CCCC-ccc-cccceEecCCCcCccchhhHHHhhhcCc
Q 006671 490 ---DEAK-PWN-ERCDVAFPCASQNEIDQSDAINLVNSGC 524 (636)
Q Consensus 490 ---~~~e-il~-~~cDIliPcA~~n~It~enA~~l~~~~a 524 (636)
++++ .|. ..|||++.|+ +...+.+.|+..++.||
T Consensus 73 ~~~dp~~l~w~~~gvDiV~est-G~~~s~e~a~~~l~aGa 111 (331)
T 2g82_O 73 AVKDPKEIPWAEAGVGVVIEST-GVFTDADKAKAHLEGGA 111 (331)
T ss_dssp CCSSGGGSCTTTTTEEEEEECS-SSCCBHHHHTHHHHTTC
T ss_pred ecCChhhCcccccCCCEEEECC-CchhhHHHHHHHHHCCC
Confidence 1221 353 5899999986 56668888888888888
No 139
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=95.05 E-value=0.21 Score=51.97 Aligned_cols=134 Identities=15% Similarity=0.125 Sum_probs=76.5
Q ss_pred hhHHHHHHHHHHHHhCCCCCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCC
Q 006671 396 GYGLVFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRS 475 (636)
Q Consensus 396 G~GV~~~~~~~l~~~g~~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~ 475 (636)
|+|.+.+++ ..+.+++|++++|.|.|-+|+.++..|.+.|++-|.|.+.+ ++- .+++..+.+.......
T Consensus 132 ~~Gf~~~L~----~~~~~l~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt-----~~~--~~~a~~la~~~~~~~~ 200 (312)
T 3t4e_A 132 GTGHIRAIK----ESGFDMRGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRK-----DDF--FEKAVAFAKRVNENTD 200 (312)
T ss_dssp HHHHHHHHH----HTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS-----STH--HHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHH----hcCCCcCCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECC-----Cch--HHHHHHHHHHhhhccC
Confidence 566665554 45788999999999999999999999999999557777762 111 3333323221111000
Q ss_pred ccccccccCCceeeCCCCc---c--ccccceEecCCCcCc--cchh----hHHHhhhcCceEEEeCCCCCC-CHHHHHHH
Q 006671 476 LRDYSKTYARSKYYDEAKP---W--NERCDVAFPCASQNE--IDQS----DAINLVNSGCRILVEGSNMPC-TPEAVDVL 543 (636)
Q Consensus 476 l~~y~~~~p~a~~i~~~ei---l--~~~cDIliPcA~~n~--It~e----nA~~l~~~~akiVvEgAN~P~-T~eA~~iL 543 (636)
. ....++-+++ - -.++||+|-|..-+. .+.. +...| ....+|.+-.-+|. |+ -.+.-
T Consensus 201 ~--------~v~~~~~~~l~~~~~~l~~~DiIINaTp~Gm~~~~~~~~~~~~~~l--~~~~~v~D~vY~P~~T~-ll~~A 269 (312)
T 3t4e_A 201 C--------VVTVTDLADQHAFTEALASADILTNGTKVGMKPLENESLIGDVSLL--RPELLVTECVYNPHMTK-LLQQA 269 (312)
T ss_dssp C--------EEEEEETTCHHHHHHHHHHCSEEEECSSTTSTTSTTCCSCCCGGGS--CTTCEEEECCCSSSSCH-HHHHH
T ss_pred c--------ceEEechHhhhhhHhhccCceEEEECCcCCCCCCCCCcccCCHHHc--CCCCEEEEeccCCCCCH-HHHHH
Confidence 0 0112222221 1 137899997765432 1111 12233 24578899998884 54 33344
Q ss_pred HHCCceEe
Q 006671 544 KKANVLIA 551 (636)
Q Consensus 544 ~~rGIlvi 551 (636)
+++|..++
T Consensus 270 ~~~G~~~~ 277 (312)
T 3t4e_A 270 QQAGCKTI 277 (312)
T ss_dssp HHTTCEEE
T ss_pred HHCCCeEE
Confidence 56665443
No 140
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=95.03 E-value=0.038 Score=57.96 Aligned_cols=58 Identities=19% Similarity=0.280 Sum_probs=45.7
Q ss_pred CCCcchhHHHHHHHHH--HHH---hCCCCCCcEEEEecCcc-HHHHHHHHHHHCCCEEEEEeCCC
Q 006671 391 RTEATGYGLVFFAQLI--LAD---MNKELKGLRCVVSGSGK-IAMHVLEKLIAYGAIPVSVSDAK 449 (636)
Q Consensus 391 r~eATG~GV~~~~~~~--l~~---~g~~l~GkrVaIqGfGN-VG~~aAe~L~e~GAkVVaVSDs~ 449 (636)
-...|.+|++..+++. .+. .+.++.|++|+|.|.|+ ||..+|+.|...|++ |+|+|.+
T Consensus 147 ~~PcTp~a~v~ll~~~~~~~~~~~~g~~l~gk~vvVIG~G~iVG~~~A~~L~~~gAt-Vtv~nR~ 210 (320)
T 1edz_A 147 ILPCTPLAIVKILEFLKIYNNLLPEGNRLYGKKCIVINRSEIVGRPLAALLANDGAT-VYSVDVN 210 (320)
T ss_dssp CCCHHHHHHHHHHHHTTCSCTTSCTTCTTTTCEEEEECCCTTTHHHHHHHHHTTSCE-EEEECSS
T ss_pred cCCCcHHHHHHHHHhhcccccccccCCCCCCCEEEEECCCcchHHHHHHHHHHCCCE-EEEEeCc
Confidence 4468998886555542 000 57799999999999997 699999999999999 7888874
No 141
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=94.99 E-value=0.04 Score=58.25 Aligned_cols=111 Identities=16% Similarity=0.143 Sum_probs=69.0
Q ss_pred cEEEEecCccHHHHHHHHHHHC---------CCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCce
Q 006671 417 LRCVVSGSGKIAMHVLEKLIAY---------GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSK 487 (636)
Q Consensus 417 krVaIqGfGNVG~~aAe~L~e~---------GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~ 487 (636)
.||.|+|+|.+|..-++.|.+. +++||+|+|. |.+.++.+. + .|+..+
T Consensus 27 lrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~----------~~~~a~~~a---~----------~~~~~~ 83 (412)
T 4gqa_A 27 LNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQ----------DQAMAERHA---A----------KLGAEK 83 (412)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECS----------SHHHHHHHH---H----------HHTCSE
T ss_pred ceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcC----------CHHHHHHHH---H----------HcCCCe
Confidence 5999999999999777777653 6799999997 344432221 1 122222
Q ss_pred eeCC-CCccc-cccceEecCCCcCccchhhHHHhhhcCceEEEeCCCCCCCHHHHHHH---HHCCceEe
Q 006671 488 YYDE-AKPWN-ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVL---KKANVLIA 551 (636)
Q Consensus 488 ~i~~-~eil~-~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~~iL---~~rGIlvi 551 (636)
..++ ++++. .++|+++=|. .+..+.+.+...++.|..++||=-=.....||++++ +++|+.+.
T Consensus 84 ~y~d~~~ll~~~~vD~V~I~t-p~~~H~~~~~~al~aGkhVl~EKP~a~~~~ea~~l~~~a~~~g~~~~ 151 (412)
T 4gqa_A 84 AYGDWRELVNDPQVDVVDITS-PNHLHYTMAMAAIAAGKHVYCEKPLAVNEQQAQEMAQAARRAGVKTM 151 (412)
T ss_dssp EESSHHHHHHCTTCCEEEECS-CGGGHHHHHHHHHHTTCEEEEESCSCSSHHHHHHHHHHHHHHTCCEE
T ss_pred EECCHHHHhcCCCCCEEEECC-CcHHHHHHHHHHHHcCCCeEeecCCcCCHHHHHHHHHHHHHhCCeee
Confidence 2222 44553 4688887544 566788888777788888888852222334555443 45565544
No 142
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=94.94 E-value=0.033 Score=57.58 Aligned_cols=52 Identities=21% Similarity=0.255 Sum_probs=43.1
Q ss_pred CCcchhHHHHHHHHHHHHhCCCCCCcEEEEecCcc-HHHHHHHHHHHC--CCEEEEEeCC
Q 006671 392 TEATGYGLVFFAQLILADMNKELKGLRCVVSGSGK-IAMHVLEKLIAY--GAIPVSVSDA 448 (636)
Q Consensus 392 ~eATG~GV~~~~~~~l~~~g~~l~GkrVaIqGfGN-VG~~aAe~L~e~--GAkVVaVSDs 448 (636)
...|.+|++..+ ++.+.+++|++++|.|.|+ ||..+|..|... |++ |+++++
T Consensus 138 ~PcTp~gi~~ll----~~~~i~l~gk~vvVvG~s~iVG~p~A~lL~~~g~~at-Vtv~h~ 192 (281)
T 2c2x_A 138 LPCTPRGIVHLL----RRYDISIAGAHVVVIGRGVTVGRPLGLLLTRRSENAT-VTLCHT 192 (281)
T ss_dssp CCHHHHHHHHHH----HHTTCCCTTCEEEEECCCTTTHHHHHHHHTSTTTCCE-EEEECT
T ss_pred CCChHHHHHHHH----HHcCCCCCCCEEEEECCCcHHHHHHHHHHhcCCCCCE-EEEEEC
Confidence 468888866554 4568899999999999997 699999999999 888 677765
No 143
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=94.93 E-value=0.045 Score=55.91 Aligned_cols=111 Identities=12% Similarity=0.076 Sum_probs=63.9
Q ss_pred CCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeCC-C
Q 006671 414 LKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE-A 492 (636)
Q Consensus 414 l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~~-~ 492 (636)
..-++|.|.|+|++|..+|+.|.+.|..| .+.|. ++ +++..+. +. ++...+. .
T Consensus 19 ~~m~~I~iIG~G~mG~~~A~~l~~~G~~V-~~~dr-----~~-----~~~~~l~---~~------------g~~~~~~~~ 72 (310)
T 3doj_A 19 SHMMEVGFLGLGIMGKAMSMNLLKNGFKV-TVWNR-----TL-----SKCDELV---EH------------GASVCESPA 72 (310)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHTTCEE-EEECS-----SG-----GGGHHHH---HT------------TCEECSSHH
T ss_pred ccCCEEEEECccHHHHHHHHHHHHCCCeE-EEEeC-----CH-----HHHHHHH---HC------------CCeEcCCHH
Confidence 34479999999999999999999999985 45565 22 2222221 11 1222111 1
Q ss_pred CccccccceEecCCCcCccchhhH---HHhh---hcCceEEEeCCCC-C-CCHHHHHHHHHCCceEec
Q 006671 493 KPWNERCDVAFPCASQNEIDQSDA---INLV---NSGCRILVEGSNM-P-CTPEAVDVLKKANVLIAP 552 (636)
Q Consensus 493 eil~~~cDIliPcA~~n~It~enA---~~l~---~~~akiVvEgAN~-P-~T~eA~~iL~~rGIlviP 552 (636)
+. -.+|||+|-|........+.. ..|. ..+ ++|+.-++. | ++.+..+.+.++|+.|+.
T Consensus 73 ~~-~~~aDvvi~~vp~~~~~~~v~~~~~~l~~~l~~g-~~vv~~st~~~~~~~~~~~~~~~~g~~~v~ 138 (310)
T 3doj_A 73 EV-IKKCKYTIAMLSDPCAALSVVFDKGGVLEQICEG-KGYIDMSTVDAETSLKINEAITGKGGRFVE 138 (310)
T ss_dssp HH-HHHCSEEEECCSSHHHHHHHHHSTTCGGGGCCTT-CEEEECSCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HH-HHhCCEEEEEcCCHHHHHHHHhCchhhhhccCCC-CEEEECCCCCHHHHHHHHHHHHHcCCEEEe
Confidence 11 236899998876543222222 2221 223 455555553 3 234455778889988764
No 144
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=94.91 E-value=0.19 Score=46.04 Aligned_cols=115 Identities=18% Similarity=0.123 Sum_probs=68.9
Q ss_pred CCCcEEEEecC----ccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceee
Q 006671 414 LKGLRCVVSGS----GKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYY 489 (636)
Q Consensus 414 l~GkrVaIqGf----GNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i 489 (636)
++-++|+|+|. |++|...++.|.+.|.+|..+ ||++ +++ ..+.- |++.
T Consensus 12 ~~p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~v--------np~~---~~i----------~G~~~----~~s~--- 63 (138)
T 1y81_A 12 KEFRKIALVGASKNPAKYGNIILKDLLSKGFEVLPV--------NPNY---DEI----------EGLKC----YRSV--- 63 (138)
T ss_dssp --CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEE--------CTTC---SEE----------TTEEC----BSSG---
T ss_pred cCCCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEe--------CCCC---CeE----------CCeee----cCCH---
Confidence 35679999999 999999999999999985443 3332 000 00111 1111
Q ss_pred CCCCccccccceEecCCCcCccchhhHHHhhhcCceEEEeCCCCCCCHHHHHHHHHCCceEecccccccccceee
Q 006671 490 DEAKPWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANVLIAPAMAAGAGGVVAG 564 (636)
Q Consensus 490 ~~~eil~~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~~iL~~rGIlviPD~~aNAGGVivS 564 (636)
+++- .++|+++-|.. .....+-+..+++.+++.|+.-+- -.+.+..+..+++|+.++= -|+=|++..
T Consensus 64 --~el~-~~vDlvii~vp-~~~v~~v~~~~~~~g~~~i~~~~~-~~~~~l~~~a~~~Gi~~ig---pnc~g~~~~ 130 (138)
T 1y81_A 64 --RELP-KDVDVIVFVVP-PKVGLQVAKEAVEAGFKKLWFQPG-AESEEIRRFLEKAGVEYSF---GRCIMVETS 130 (138)
T ss_dssp --GGSC-TTCCEEEECSC-HHHHHHHHHHHHHTTCCEEEECTT-SCCHHHHHHHHHHTCEEEC---SCCHHHHC-
T ss_pred --HHhC-CCCCEEEEEeC-HHHHHHHHHHHHHcCCCEEEEcCc-cHHHHHHHHHHHCCCEEEc---CCcceEEcc
Confidence 1121 25788877766 344445555555557776654332 2467888889999998762 255555543
No 145
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=94.88 E-value=0.2 Score=43.57 Aligned_cols=32 Identities=22% Similarity=0.425 Sum_probs=27.1
Q ss_pred CcEEEEecCccHHHHHHHHHHHCCCEEEEEeCC
Q 006671 416 GLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (636)
Q Consensus 416 GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs 448 (636)
+++|+|.|+|.+|..+++.|.+.|..|+.+ |.
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~-d~ 35 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLI-DI 35 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEE-ES
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEE-EC
Confidence 578999999999999999999999986544 54
No 146
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=94.85 E-value=0.03 Score=58.12 Aligned_cols=113 Identities=18% Similarity=0.148 Sum_probs=71.9
Q ss_pred cEEEEecCccHHHHHHHHHHHC-CCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeCC-CCc
Q 006671 417 LRCVVSGSGKIAMHVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE-AKP 494 (636)
Q Consensus 417 krVaIqGfGNVG~~aAe~L~e~-GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~~-~ei 494 (636)
.+|.|+|+|++|...++.|.+. +.++++|+|. +.++...+ .+..+ +. +.....++ +++
T Consensus 7 ~~vgiiG~G~ig~~~~~~l~~~~~~~lv~v~d~----------~~~~~~~~---a~~~~-~~------~~~~~~~~~~~l 66 (362)
T 1ydw_A 7 IRIGVMGCADIARKVSRAIHLAPNATISGVASR----------SLEKAKAF---ATANN-YP------ESTKIHGSYESL 66 (362)
T ss_dssp EEEEEESCCTTHHHHHHHHHHCTTEEEEEEECS----------SHHHHHHH---HHHTT-CC------TTCEEESSHHHH
T ss_pred eEEEEECchHHHHHHHHHHhhCCCcEEEEEEcC----------CHHHHHHH---HHHhC-CC------CCCeeeCCHHHH
Confidence 6899999999999888888875 7899999997 23332211 11111 00 01222222 345
Q ss_pred cc-cccceEecCCCcCccchhhHHHhhhcCceEEEeCCCCCCC-HHHHH---HHHHCCceEe
Q 006671 495 WN-ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCT-PEAVD---VLKKANVLIA 551 (636)
Q Consensus 495 l~-~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T-~eA~~---iL~~rGIlvi 551 (636)
+. .++|+++-|. .+..+.+.+...++.|..+++|=- +-+| .++.+ ..+++|+.+.
T Consensus 67 l~~~~~D~V~i~t-p~~~h~~~~~~al~aGk~V~~EKP-~a~~~~e~~~l~~~a~~~g~~~~ 126 (362)
T 1ydw_A 67 LEDPEIDALYVPL-PTSLHVEWAIKAAEKGKHILLEKP-VAMNVTEFDKIVDACEANGVQIM 126 (362)
T ss_dssp HHCTTCCEEEECC-CGGGHHHHHHHHHTTTCEEEECSS-CSSSHHHHHHHHHHHHTTTCCEE
T ss_pred hcCCCCCEEEEcC-ChHHHHHHHHHHHHCCCeEEEecC-CcCCHHHHHHHHHHHHHcCCEEE
Confidence 53 4799999876 566778888888888999999841 1123 34443 3356787665
No 147
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=94.83 E-value=0.027 Score=59.46 Aligned_cols=102 Identities=14% Similarity=0.195 Sum_probs=59.9
Q ss_pred cEEEEecCccHHHHHHHHHHHC-CCEEEEEeCCCCceeCCCCCCHHHHHHHHHHH--hhcCCc--cccccccCCce-eeC
Q 006671 417 LRCVVSGSGKIAMHVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIK--SQQRSL--RDYSKTYARSK-YYD 490 (636)
Q Consensus 417 krVaIqGfGNVG~~aAe~L~e~-GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k--~~~g~l--~~y~~~~p~a~-~i~ 490 (636)
.||+|.|||.||+.+++.|.+. +..||+|.|. ++ +. +..+.++. ...+++ ..-...+.+.. .+.
T Consensus 3 ikVgI~G~G~IGr~v~r~l~~~~~~evvaV~d~-----~~---~~--~~~l~~~dg~s~~g~~~~~~~v~~~~~~~l~v~ 72 (343)
T 2yyy_A 3 AKVLINGYGSIGKRVADAVSMQDDMEVIGVTKT-----KP---DF--EARLAVEKGYKLFVAIPDNERVKLFEDAGIPVE 72 (343)
T ss_dssp EEEEEECCSHHHHHHHHHHHHSSSEEEEEEEES-----SC---SH--HHHHHHHTTCCEEESSCCHHHHHHHHHTTCCCC
T ss_pred eEEEEECCCHHHHHHHHHHHhCCCceEEEEecC-----CH---HH--HHHHHHhcCCccccccCCCceeecccCCeEEEC
Confidence 4899999999999999999886 6899999996 22 22 12233222 111221 00000010100 111
Q ss_pred C--CCccccccceEecCCCcCccchhhHH-HhhhcCceEEEeC
Q 006671 491 E--AKPWNERCDVAFPCASQNEIDQSDAI-NLVNSGCRILVEG 530 (636)
Q Consensus 491 ~--~eil~~~cDIliPcA~~n~It~enA~-~l~~~~akiVvEg 530 (636)
+ ++++ .++||++-|+.. .++.+.++ ..++.|+++|..+
T Consensus 73 ~~~~~~~-~~vDiV~eatg~-~~s~~~a~~~~l~aG~~VI~sa 113 (343)
T 2yyy_A 73 GTILDII-EDADIVVDGAPK-KIGKQNLENIYKPHKVKAILQG 113 (343)
T ss_dssp CBGGGTG-GGCSEEEECCCT-THHHHHHHHTTTTTTCEEEECT
T ss_pred CchHHhc-cCCCEEEECCCc-cccHHHHHHHHHHCCCEEEECC
Confidence 1 2222 289999999754 44566675 6677899988754
No 148
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=94.80 E-value=0.035 Score=56.81 Aligned_cols=50 Identities=14% Similarity=0.222 Sum_probs=41.0
Q ss_pred chhHHHHHHHHHHHHhCCCCCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeCC
Q 006671 395 TGYGLVFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (636)
Q Consensus 395 TG~GV~~~~~~~l~~~g~~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs 448 (636)
-|+|.+.+++ ..+.+++|+++.|.|.|.+|+.++..|.+.|++-|.|.+.
T Consensus 100 D~~G~~~~L~----~~~~~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R 149 (277)
T 3don_A 100 DGIGYVNGLK----QIYEGIEDAYILILGAGGASKGIANELYKIVRPTLTVANR 149 (277)
T ss_dssp HHHHHHHHHH----HHSTTGGGCCEEEECCSHHHHHHHHHHHTTCCSCCEEECS
T ss_pred hHHHHHHHHH----HhCCCcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeC
Confidence 3667666554 4577899999999999999999999999999944677776
No 149
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=94.79 E-value=0.074 Score=54.76 Aligned_cols=109 Identities=13% Similarity=0.147 Sum_probs=66.0
Q ss_pred cEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeCCCCccc
Q 006671 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKPWN 496 (636)
Q Consensus 417 krVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~~~eil~ 496 (636)
++|.++|+|++|...|+.|.+.|..| .|-|. +.++++.+. +. +++..+.-.-.-
T Consensus 4 ~kIgfIGlG~MG~~mA~~L~~~G~~v-~v~dr----------~~~~~~~l~---~~------------Ga~~a~s~~e~~ 57 (300)
T 3obb_A 4 KQIAFIGLGHMGAPMATNLLKAGYLL-NVFDL----------VQSAVDGLV---AA------------GASAARSARDAV 57 (300)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEE-EEECS----------SHHHHHHHH---HT------------TCEECSSHHHHH
T ss_pred CEEEEeeehHHHHHHHHHHHhCCCeE-EEEcC----------CHHHHHHHH---Hc------------CCEEcCCHHHHH
Confidence 48999999999999999999999984 55554 344443232 11 232222111123
Q ss_pred cccceEecCCCcCccchhhHHH---hhh--cCceEEEeCCCC-C-CCHHHHHHHHHCCceEe
Q 006671 497 ERCDVAFPCASQNEIDQSDAIN---LVN--SGCRILVEGSNM-P-CTPEAVDVLKKANVLIA 551 (636)
Q Consensus 497 ~~cDIliPcA~~n~It~enA~~---l~~--~~akiVvEgAN~-P-~T~eA~~iL~~rGIlvi 551 (636)
..|||+|-|-......++-... +.. ..=++|++..+. | .+.+..+.++++||.|+
T Consensus 58 ~~~dvv~~~l~~~~~v~~V~~~~~g~~~~~~~g~iiId~sT~~p~~~~~~a~~~~~~G~~~l 119 (300)
T 3obb_A 58 QGADVVISMLPASQHVEGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGLAML 119 (300)
T ss_dssp TTCSEEEECCSCHHHHHHHHHSSSSSTTSCCC-CEEEECSCCCHHHHHHHHHHHHTTTCEEE
T ss_pred hcCCceeecCCchHHHHHHHhchhhhhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEE
Confidence 4799999887643222221110 111 112577777764 4 56667788999999987
No 150
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=94.76 E-value=0.049 Score=55.90 Aligned_cols=110 Identities=15% Similarity=0.213 Sum_probs=71.4
Q ss_pred cEEEEecCccHHHHHHHHHHHCC---CEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeCCCC
Q 006671 417 LRCVVSGSGKIAMHVLEKLIAYG---AIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAK 493 (636)
Q Consensus 417 krVaIqGfGNVG~~aAe~L~e~G---AkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~~~e 493 (636)
.||.|+|+|++|...++.|.+.+ +++++|+|. |.+....+ .+..+ + |. .+-+-++
T Consensus 3 ~rigiiG~G~ig~~~~~~l~~~~~~~~~l~av~d~----------~~~~a~~~---a~~~~-~-------~~-~~~~~~~ 60 (334)
T 3ohs_X 3 LRWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAAR----------DLSRAKEF---AQKHD-I-------PK-AYGSYEE 60 (334)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSCTTTEEEEEEECS----------SHHHHHHH---HHHHT-C-------SC-EESSHHH
T ss_pred cEEEEECchHHHHHHHHHHHhCCCCCeEEEEEEcC----------CHHHHHHH---HHHcC-C-------Cc-ccCCHHH
Confidence 58999999999999888887653 589999997 33333222 11111 1 00 1112234
Q ss_pred ccc-cccceEecCCCcCccchhhHHHhhhcCceEEEeCCCCCC--C-HHHHH---HHHHCCceEec
Q 006671 494 PWN-ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPC--T-PEAVD---VLKKANVLIAP 552 (636)
Q Consensus 494 il~-~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgAN~P~--T-~eA~~---iL~~rGIlviP 552 (636)
++. .++|+++=|. .+..+.+.+...++.|..++||= |+ | .|+.+ ..+++|+.+.-
T Consensus 61 ll~~~~vD~V~i~t-p~~~H~~~~~~al~~GkhVl~EK---P~a~~~~e~~~l~~~a~~~~~~~~v 122 (334)
T 3ohs_X 61 LAKDPNVEVAYVGT-QHPQHKAAVMLCLAAGKAVLCEK---PMGVNAAEVREMVTEARSRGLFLME 122 (334)
T ss_dssp HHHCTTCCEEEECC-CGGGHHHHHHHHHHTTCEEEEES---SSSSSHHHHHHHHHHHHHTTCCEEE
T ss_pred HhcCCCCCEEEECC-CcHHHHHHHHHHHhcCCEEEEEC---CCCCCHHHHHHHHHHHHHhCCEEEE
Confidence 553 4799999776 56678888888888999999995 42 3 34443 34567776553
No 151
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=94.75 E-value=0.026 Score=58.34 Aligned_cols=107 Identities=17% Similarity=0.245 Sum_probs=69.6
Q ss_pred cEEEEecCccHHHH-HHH-HHHH-CCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeCC-C
Q 006671 417 LRCVVSGSGKIAMH-VLE-KLIA-YGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE-A 492 (636)
Q Consensus 417 krVaIqGfGNVG~~-aAe-~L~e-~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~~-~ 492 (636)
.||.|.|+|++|.. .+. .|.. .++++++|+|. +++-. + ... .+++....++ +
T Consensus 3 ~rvgiiG~G~~g~~~~~~~~~~~~~~~~l~av~d~-----~~~~~---~------------~~~----~~~~~~~~~~~~ 58 (345)
T 3f4l_A 3 INCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRR-----HAKPE---E------------QAP----IYSHIHFTSDLD 58 (345)
T ss_dssp EEEEEECCSHHHHHHTHHHHTTCTTTEEEEEEECS-----SCCGG---G------------GSG----GGTTCEEESCTH
T ss_pred eEEEEEecCHHHHHHHHHHHHhcCCCeEEEEEEcC-----CHhHH---H------------HHH----hcCCCceECCHH
Confidence 58999999999984 556 4333 58999999997 44321 0 011 1234444333 4
Q ss_pred Cccc-cccceEecCCCcCccchhhHHHhhhcCceEEEeCCCCCC--C-HHHHH---HHHHCCceEe
Q 006671 493 KPWN-ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPC--T-PEAVD---VLKKANVLIA 551 (636)
Q Consensus 493 eil~-~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgAN~P~--T-~eA~~---iL~~rGIlvi 551 (636)
+++. .++|+++=|. .+..+.+.+...++.|..+++|- |+ | .++++ ..+++|+.+.
T Consensus 59 ~ll~~~~~D~V~i~t-p~~~h~~~~~~al~aGk~Vl~EK---P~a~~~~e~~~l~~~a~~~g~~~~ 120 (345)
T 3f4l_A 59 EVLNDPDVKLVVVCT-HADSHFEYAKRALEAGKNVLVEK---PFTPTLAQAKELFALAKSKGLTVT 120 (345)
T ss_dssp HHHTCTTEEEEEECS-CGGGHHHHHHHHHHTTCEEEECS---SSCSSHHHHHHHHHHHHHHTCCEE
T ss_pred HHhcCCCCCEEEEcC-ChHHHHHHHHHHHHcCCcEEEeC---CCCCCHHHHHHHHHHHHHcCCeEE
Confidence 4554 4699999877 55678888888888999999993 42 3 34443 3456777655
No 152
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=94.74 E-value=0.058 Score=59.44 Aligned_cols=117 Identities=10% Similarity=0.057 Sum_probs=70.3
Q ss_pred CcEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeCCCCcc
Q 006671 416 GLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKPW 495 (636)
Q Consensus 416 GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~~~eil 495 (636)
-++|.|.|+|++|..+|..|.+.|.+| .+.|. +.++++.+.+.......+.. .-+.+++.
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~G~~V-~v~dr----------~~~~~~~l~~~g~~g~~i~~---------~~s~~e~v 63 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDHGFVV-CAFNR----------TVSKVDDFLANEAKGTKVVG---------AQSLKEMV 63 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCE-EEECS----------STHHHHHHHHTTTTTSSCEE---------CSSHHHHH
T ss_pred CCEEEEEChhHHHHHHHHHHHHCCCEE-EEEeC----------CHHHHHHHHhcccCCCceec---------cCCHHHHH
Confidence 468999999999999999999999985 45565 22333222211000001100 00112222
Q ss_pred c--cccceEecCCCcCccchhhHHHhhh--cCceEEEeCCCCC--CCHHHHHHHHHCCceEec
Q 006671 496 N--ERCDVAFPCASQNEIDQSDAINLVN--SGCRILVEGSNMP--CTPEAVDVLKKANVLIAP 552 (636)
Q Consensus 496 ~--~~cDIliPcA~~n~It~enA~~l~~--~~akiVvEgAN~P--~T~eA~~iL~~rGIlviP 552 (636)
. .+||+++-|-..+....+.+..|.. ..-.+|+.++|.. .|.+..+.|.++|+.|+.
T Consensus 64 ~~l~~aDvVil~Vp~~~~v~~vl~~l~~~L~~g~iIId~st~~~~~t~~~~~~l~~~Gi~fvd 126 (484)
T 4gwg_A 64 SKLKKPRRIILLVKAGQAVDDFIEKLVPLLDTGDIIIDGGNSEYRDTTRRCRDLKAKGILFVG 126 (484)
T ss_dssp HTBCSSCEEEECSCSSHHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred hhccCCCEEEEecCChHHHHHHHHHHHHhcCCCCEEEEcCCCCchHHHHHHHHHHhhcccccc
Confidence 2 1589998887766444444444432 1346888888876 345556788999998875
No 153
>1hdg_O Holo-D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehy(D)-NAD(A)); HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=94.70 E-value=0.13 Score=54.13 Aligned_cols=103 Identities=17% Similarity=0.248 Sum_probs=62.8
Q ss_pred cEEEEecCccHHHHHHHHHHHC---CCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccc------cCC--
Q 006671 417 LRCVVSGSGKIAMHVLEKLIAY---GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKT------YAR-- 485 (636)
Q Consensus 417 krVaIqGfGNVG~~aAe~L~e~---GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~------~p~-- 485 (636)
.||+|.|||-+|+.+++.|.+. ...||+|.|. .|.+.+..+.++....|.+..-... +.+
T Consensus 1 ~kVgI~G~G~iGr~llR~l~~~~~p~~eivain~~---------~~~~~~~~ll~~ds~~g~~~~~v~~~~~~l~v~g~~ 71 (332)
T 1hdg_O 1 ARVAINGFGRIGRLVYRIIYERKNPDIEVVAINDL---------TDTKTLAHLLKYDSVHKKFPGKVEYTENSLIVDGKE 71 (332)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCTTCEEEEEECS---------SCHHHHHHHHHCCTTTCCCSSCEEECSSEEEETTEE
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCCCeEEEEEEcC---------CChHHhhhhccCcCcCCCcCCcEEEcCCEEEECCeE
Confidence 4799999999999999999876 4899999984 1444444444333333332111000 001
Q ss_pred ceee---CCCCc-cc-cccceEecCCCcCccchhhHHHhhhcCce-EEEe
Q 006671 486 SKYY---DEAKP-WN-ERCDVAFPCASQNEIDQSDAINLVNSGCR-ILVE 529 (636)
Q Consensus 486 a~~i---~~~ei-l~-~~cDIliPcA~~n~It~enA~~l~~~~ak-iVvE 529 (636)
.+.. +++++ |. ..|||++.|+ +.-.+.+.|+.+++.||| +|+.
T Consensus 72 i~v~~~~dp~~l~w~~~~vDvV~~at-g~~~s~e~a~~~l~aGakkvVId 120 (332)
T 1hdg_O 72 IKVFAEPDPSKLPWKDLGVDFVIEST-GVFRNREKAELHLQAGAKKVIIT 120 (332)
T ss_dssp EEEECCSSGGGSCHHHHTCCEEEECS-SSCCBHHHHTHHHHTTCSEEEES
T ss_pred EEEEecCChHHCcccccCCCEEEECC-ccchhHHHHHHHHHcCCcEEEEe
Confidence 1222 12222 53 4799999986 455678888888888883 4443
No 154
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=94.70 E-value=0.095 Score=57.61 Aligned_cols=180 Identities=16% Similarity=0.128 Sum_probs=108.4
Q ss_pred HHHHHHHHHHHHhhcCCCCcccCCCCCCChhHHHHHHHHhhhhhCCCCccccCcccccCCCCCCCCcchhHHHHHHHHHH
Q 006671 328 MRFCQSFMNEIHRYLGPDKDLPSEEMGVGTREMGYLFGQYRRLAGHFQGSFTGPRIFWSGSSLRTEATGYGLVFFAQLIL 407 (636)
Q Consensus 328 ~r~~r~f~~eL~~~IGp~~DVpA~DiGt~~rem~~m~~~y~~l~g~~~g~vTGKp~~~GGs~~r~eATG~GV~~~~~~~l 407 (636)
+.|. .|+..+.+-.|. |-=+|++.. .--.+-+.|+..... -++. +--.-||-=+..++..++
T Consensus 149 defv-e~v~~~~P~fG~---InlEDf~ap--~af~il~ryr~~~~i--pvFn----------DD~qGTA~V~lAgllnAl 210 (487)
T 3nv9_A 149 DAVI-EFVQRIQHTFGA---INLEDISQP--NCYKILDVLRESCDI--PVWH----------DDQQGTASVTLAGLLNAL 210 (487)
T ss_dssp HHHH-HHHHHHGGGCSE---EEECSCCTT--HHHHHHHHHHHHCSS--CEEE----------TTTHHHHHHHHHHHHHHH
T ss_pred HHHH-HHHHHhCCCCCe---ecHhhcCCc--hHHHHHHHHHhhccC--Cccc----------cccchHHHHHHHHHHHHH
Confidence 3444 366777765543 667888653 444566777753211 1111 112245666666778888
Q ss_pred HHhCCCCCCcEEEEecCccHHHHHHHHHHHCCC--EEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCC
Q 006671 408 ADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGA--IPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYAR 485 (636)
Q Consensus 408 ~~~g~~l~GkrVaIqGfGNVG~~aAe~L~e~GA--kVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~ 485 (636)
+-.|.+|+..||+|.|.|..|..+|++|...|. +=+.+.|++|.|+.... |..... -...|. .|++.. +
T Consensus 211 ki~gk~l~d~riV~~GAGaAGigia~ll~~~G~~~~~i~l~D~~Gli~~~R~-~l~~~~-~~~~k~------~~A~~~-n 281 (487)
T 3nv9_A 211 KLVKKDIHECRMVFIGAGSSNTTCLRLIVTAGADPKKIVMFDSKGSLHNGRE-DIKKDT-RFYRKW------EICETT-N 281 (487)
T ss_dssp HHHTCCGGGCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEETTEECCTTCH-HHHHCG-GGHHHH------HHHHHS-C
T ss_pred HHhCCChhhcEEEEECCCHHHHHHHHHHHHcCCCcccEEEEeccccccCCcc-hhhhhc-ccHHHH------HHHHhc-c
Confidence 888999999999999999999999999999998 45789999999987542 111100 000010 010000 0
Q ss_pred ceeeCCCCccc--cccceEecCCCc--CccchhhHHHhhhcCceEEEeCCC-CC-CCHH
Q 006671 486 SKYYDEAKPWN--ERCDVAFPCASQ--NEIDQSDAINLVNSGCRILVEGSN-MP-CTPE 538 (636)
Q Consensus 486 a~~i~~~eil~--~~cDIliPcA~~--n~It~enA~~l~~~~akiVvEgAN-~P-~T~e 538 (636)
.. ....+.+ ..+||||=+++. +.+|++-.+.+ +.-.||.--|| -| +|||
T Consensus 282 ~~--~~~~L~eav~~adVlIG~S~~~pg~ft~e~V~~M--a~~PIIFaLSNPtpEi~pe 336 (487)
T 3nv9_A 282 PS--KFGSIAEACVGADVLISLSTPGPGVVKAEWIKSM--GEKPIVFCCANPVPEIYPY 336 (487)
T ss_dssp TT--CCCSHHHHHTTCSEEEECCCSSCCCCCHHHHHTS--CSSCEEEECCSSSCSSCHH
T ss_pred cc--cCCCHHHHHhcCCEEEEecccCCCCCCHHHHHhh--cCCCEEEECCCCCccCCHH
Confidence 00 0011111 135899888844 88888888877 24567776777 22 4554
No 155
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=94.68 E-value=0.072 Score=55.10 Aligned_cols=118 Identities=9% Similarity=0.056 Sum_probs=75.8
Q ss_pred cEEEEec-CccHHHHHHHHHHH-CCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeCC-CC
Q 006671 417 LRCVVSG-SGKIAMHVLEKLIA-YGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE-AK 493 (636)
Q Consensus 417 krVaIqG-fGNVG~~aAe~L~e-~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~~-~e 493 (636)
.||+|.| +|++|+.+++.+.+ .+..+|++.|.++. +..|.|..++. + +.. .+....++ ++
T Consensus 22 irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~--~~~G~d~gel~---------G-~~~-----~gv~v~~dl~~ 84 (288)
T 3ijp_A 22 MRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGS--SFVDKDASILI---------G-SDF-----LGVRITDDPES 84 (288)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTC--TTTTSBGGGGT---------T-CSC-----CSCBCBSCHHH
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCc--cccccchHHhh---------c-cCc-----CCceeeCCHHH
Confidence 6899999 99999999999875 58999999998542 12466654420 0 111 12222222 23
Q ss_pred ccccccceEecCCCcCccchhhHHHhhhcCceEEEeCCCCCCCHHHHHHHH----HCCceEecccc
Q 006671 494 PWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLK----KANVLIAPAMA 555 (636)
Q Consensus 494 il~~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~~iL~----~rGIlviPD~~ 555 (636)
++. ++||+|-++.... ..+++...++.+..+|++-. ..+++..+.|+ +.++++.|.+.
T Consensus 85 ll~-~aDVvIDFT~p~a-~~~~~~~~l~~Gv~vViGTT--G~~~e~~~~L~~aa~~~~~~~a~N~S 146 (288)
T 3ijp_A 85 AFS-NTEGILDFSQPQA-SVLYANYAAQKSLIHIIGTT--GFSKTEEAQIADFAKYTTIVKSGNMS 146 (288)
T ss_dssp HTT-SCSEEEECSCHHH-HHHHHHHHHHHTCEEEECCC--CCCHHHHHHHHHHHTTSEEEECSCCC
T ss_pred Hhc-CCCEEEEcCCHHH-HHHHHHHHHHcCCCEEEECC--CCCHHHHHHHHHHhCcCCEEEECCCc
Confidence 343 7999999886443 46777777888999998542 35665444443 34566666553
No 156
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=94.67 E-value=0.081 Score=52.20 Aligned_cols=98 Identities=13% Similarity=0.106 Sum_probs=61.4
Q ss_pred CCCCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeC-
Q 006671 412 KELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD- 490 (636)
Q Consensus 412 ~~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~- 490 (636)
.++.+++|.|.|.|++|...++.|.+.|..+|.+.|. +.+.+..+. +.. +....+
T Consensus 6 ~~~~~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~----------~~~~~~~~~---~~~-----------g~~~~~~ 61 (266)
T 3d1l_A 6 RSIEDTPIVLIGAGNLATNLAKALYRKGFRIVQVYSR----------TEESARELA---QKV-----------EAEYTTD 61 (266)
T ss_dssp -CGGGCCEEEECCSHHHHHHHHHHHHHTCCEEEEECS----------SHHHHHHHH---HHT-----------TCEEESC
T ss_pred cCCCCCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeC----------CHHHHHHHH---HHc-----------CCceeCC
Confidence 4556779999999999999999999999987788886 233332221 111 111111
Q ss_pred CCCccccccceEecCCCcCccchhhHHHhhh-c-CceEEEeCCCCCC
Q 006671 491 EAKPWNERCDVAFPCASQNEIDQSDAINLVN-S-GCRILVEGSNMPC 535 (636)
Q Consensus 491 ~~eil~~~cDIliPcA~~n~It~enA~~l~~-~-~akiVvEgAN~P~ 535 (636)
.++++ .+||++|-|.....+ .+-+..+.. . .-++|+..+|+..
T Consensus 62 ~~~~~-~~~Dvvi~av~~~~~-~~v~~~l~~~~~~~~ivv~~s~~~~ 106 (266)
T 3d1l_A 62 LAEVN-PYAKLYIVSLKDSAF-AELLQGIVEGKREEALMVHTAGSIP 106 (266)
T ss_dssp GGGSC-SCCSEEEECCCHHHH-HHHHHHHHTTCCTTCEEEECCTTSC
T ss_pred HHHHh-cCCCEEEEecCHHHH-HHHHHHHHhhcCCCcEEEECCCCCc
Confidence 12233 379999999987755 555555532 1 2356777777543
No 157
>1gad_O D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehyde(D)-NAD+(A)); HET: NAD; 1.80A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1dc4_A* 1dc3_A 1dc6_A* 1dc5_A* 1s7c_A* 1gae_O* 2vyn_A* 2vyv_A*
Probab=94.67 E-value=0.15 Score=53.56 Aligned_cols=105 Identities=15% Similarity=0.214 Sum_probs=65.3
Q ss_pred cEEEEecCccHHHHHHHHHHHC-CCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccc------cCC--ce
Q 006671 417 LRCVVSGSGKIAMHVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKT------YAR--SK 487 (636)
Q Consensus 417 krVaIqGfGNVG~~aAe~L~e~-GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~------~p~--a~ 487 (636)
.||+|.|||.+|+.+++.|.+. ...||+|.|. .|.+.+..|.++....+.+....+. +.+ .+
T Consensus 2 ikVgI~G~G~iG~~l~R~l~~~~~veiv~i~~~---------~~~~~~a~l~~~ds~~g~~~~~v~~~~~~l~v~g~~i~ 72 (330)
T 1gad_O 2 IKVGINGFGRIGRIVFRAAQKRSDIEIVAINDL---------LDADYMAYMLKYDSTHGRFDGTVEVKDGHLIVNGKKIR 72 (330)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCSSEEEEEEECS---------SCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEE
T ss_pred eEEEEECcCHHHHHHHHHHHcCCCeEEEEEcCC---------CChhHHhHhhcccccCCCCCCeEEEcCCEEEECCEEEE
Confidence 4899999999999999999875 5789999885 2444444444443333333221100 000 01
Q ss_pred eeCC---CCc-cc-cccceEecCCCcCccchhhHHHhhhcCceEEEeCC
Q 006671 488 YYDE---AKP-WN-ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGS 531 (636)
Q Consensus 488 ~i~~---~ei-l~-~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgA 531 (636)
.+.. +++ |. ..|||+|.|+ +.-.+.+.|+.+++.|||+|.=.|
T Consensus 73 v~~~~dp~~i~w~~~~vDvVf~at-g~~~s~e~a~~~l~~GakvVdlSa 120 (330)
T 1gad_O 73 VTAERDPANLKWDEVGVDVVAEAT-GLFLTDETARKHITAGAKKVVMTG 120 (330)
T ss_dssp EECCSSGGGGCHHHHTCSEEEECS-SSCCSHHHHTHHHHTTCSEEEESS
T ss_pred EEEcCChhhCccccccCCEEEECC-CccccHHHHHHHHHCCCEEEEECC
Confidence 1222 222 53 5799999886 555678888888888888665443
No 158
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=94.64 E-value=0.042 Score=55.16 Aligned_cols=108 Identities=11% Similarity=0.073 Sum_probs=61.8
Q ss_pred cEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeCC-CCcc
Q 006671 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE-AKPW 495 (636)
Q Consensus 417 krVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~~-~eil 495 (636)
++|.|.|+|++|..+|+.|.+.|..| .+.|. +++ +++.+.+ . ++...+. .+.
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V-~~~dr-----~~~-----~~~~~~~---~------------g~~~~~~~~~~- 54 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDV-TVWNR-----NPA-----KCAPLVA---L------------GARQASSPAEV- 54 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCE-EEECS-----SGG-----GGHHHHH---H------------TCEECSCHHHH-
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeE-EEEcC-----CHH-----HHHHHHH---C------------CCeecCCHHHH-
Confidence 47999999999999999999999985 45565 222 2222221 1 1122111 111
Q ss_pred ccccceEecCCCcCccchhhH---HHhh---hcCceEEEeCCCC-CC-CHHHHHHHHHCCceEec
Q 006671 496 NERCDVAFPCASQNEIDQSDA---INLV---NSGCRILVEGSNM-PC-TPEAVDVLKKANVLIAP 552 (636)
Q Consensus 496 ~~~cDIliPcA~~n~It~enA---~~l~---~~~akiVvEgAN~-P~-T~eA~~iL~~rGIlviP 552 (636)
-.+||++|-|........+.. ..+. ..++ +|+.-++. |. +.+..+.+.++|+.|+.
T Consensus 55 ~~~advvi~~v~~~~~~~~v~~~~~~l~~~l~~g~-~vv~~st~~~~~~~~~~~~~~~~g~~~~~ 118 (287)
T 3pdu_A 55 CAACDITIAMLADPAAAREVCFGANGVLEGIGGGR-GYIDMSTVDDETSTAIGAAVTARGGRFLE 118 (287)
T ss_dssp HHHCSEEEECCSSHHHHHHHHHSTTCGGGTCCTTC-EEEECSCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHcCCEEEEEcCCHHHHHHHHcCchhhhhcccCCC-EEEECCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 237899999887653222222 2222 2233 45555543 32 33445677889988763
No 159
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=94.62 E-value=0.096 Score=56.24 Aligned_cols=115 Identities=16% Similarity=0.168 Sum_probs=74.3
Q ss_pred CCcEEEEecCccHHHHHHHHHHHC-CCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeC---
Q 006671 415 KGLRCVVSGSGKIAMHVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD--- 490 (636)
Q Consensus 415 ~GkrVaIqGfGNVG~~aAe~L~e~-GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~--- 490 (636)
+-.||.|+|+|++|...++.|.+. |++|++|+|. |.+++..+.+.....+ +|..+..+
T Consensus 19 ~~~rvgiIG~G~~g~~h~~~l~~~~~~~lvav~d~----------~~~~~~~~a~~~~~~g--------~~~~~~~~~~~ 80 (444)
T 2ixa_A 19 KKVRIAFIAVGLRGQTHVENMARRDDVEIVAFADP----------DPYMVGRAQEILKKNG--------KKPAKVFGNGN 80 (444)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHTCTTEEEEEEECS----------CHHHHHHHHHHHHHTT--------CCCCEEECSST
T ss_pred CCceEEEEecCHHHHHHHHHHHhCCCcEEEEEEeC----------CHHHHHHHHHHHHhcC--------CCCCceeccCC
Confidence 447999999999999888888774 7899999997 3344332222110111 12223332
Q ss_pred --CCCccc-cccceEecCCCcCccchhhHHHhhhcCceEEEeCCCCC--CCH-HHHHH---HHHCCceEe
Q 006671 491 --EAKPWN-ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMP--CTP-EAVDV---LKKANVLIA 551 (636)
Q Consensus 491 --~~eil~-~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgAN~P--~T~-eA~~i---L~~rGIlvi 551 (636)
-++++. .++|+++-|.. +..+.+.+...++.|..++|| -| +|. ++.++ .+++|+.+.
T Consensus 81 ~~~~~ll~~~~vD~V~i~tp-~~~h~~~~~~al~aGkhV~~E---KP~a~~~~ea~~l~~~a~~~g~~~~ 146 (444)
T 2ixa_A 81 DDYKNMLKDKNIDAVFVSSP-WEWHHEHGVAAMKAGKIVGME---VSGAITLEECWDYVKVSEQTGVPLM 146 (444)
T ss_dssp TTHHHHTTCTTCCEEEECCC-GGGHHHHHHHHHHTTCEEEEC---CCCCSSHHHHHHHHHHHHHHCCCEE
T ss_pred CCHHHHhcCCCCCEEEEcCC-cHHHHHHHHHHHHCCCeEEEe---CCCcCCHHHHHHHHHHHHHhCCeEE
Confidence 234554 47999998875 556788888888889999999 35 333 34433 356786654
No 160
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=94.56 E-value=0.14 Score=51.51 Aligned_cols=85 Identities=18% Similarity=0.207 Sum_probs=60.6
Q ss_pred cEEEEecC-ccHHHHHHHHHHHC-CCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeCCCCc
Q 006671 417 LRCVVSGS-GKIAMHVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKP 494 (636)
Q Consensus 417 krVaIqGf-GNVG~~aAe~L~e~-GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~~~ei 494 (636)
.+|+|.|+ |.+|+.+++.+.+. |..++++.|.. + |++++
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~------~--dl~~~------------------------------- 41 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAG------D--PLSLL------------------------------- 41 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTT------C--CTHHH-------------------------------
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccC------C--CHHHH-------------------------------
Confidence 37999995 99999999998865 99999999863 1 12211
Q ss_pred cccccceEecCCCcCccchhhHHHhhhcCceEEEeCCCCCCCHHHHHHH
Q 006671 495 WNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVL 543 (636)
Q Consensus 495 l~~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~~iL 543 (636)
+..++|++|-++.... ..+++....++++.+|++-. ..+++..+.|
T Consensus 42 ~~~~~DvvIDfT~p~a-~~~~~~~a~~~g~~~VigTT--G~~~e~~~~l 87 (245)
T 1p9l_A 42 TDGNTEVVIDFTHPDV-VMGNLEFLIDNGIHAVVGTT--GFTAERFQQV 87 (245)
T ss_dssp HHTTCCEEEECSCTTT-HHHHHHHHHHTTCEEEECCC--CCCHHHHHHH
T ss_pred hccCCcEEEEccChHH-HHHHHHHHHHcCCCEEEcCC--CCCHHHHHHH
Confidence 1125689998886554 46777777788999999765 2666644444
No 161
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=94.55 E-value=0.7 Score=50.22 Aligned_cols=135 Identities=13% Similarity=0.175 Sum_probs=74.4
Q ss_pred hCCCCCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCC-----ccccccc-c
Q 006671 410 MNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRS-----LRDYSKT-Y 483 (636)
Q Consensus 410 ~g~~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~-----l~~y~~~-~ 483 (636)
++....-++|+|.|.|.||..+|..|.+ |..|+ +.|. |.++++.+. +.... +.++... .
T Consensus 30 ~~r~~~~mkIaVIGlG~mG~~lA~~La~-G~~V~-~~D~----------~~~~v~~l~---~g~~~i~e~~l~~ll~~~~ 94 (432)
T 3pid_A 30 MGRGSEFMKITISGTGYVGLSNGVLIAQ-NHEVV-ALDI----------VQAKVDMLN---QKISPIVDKEIQEYLAEKP 94 (432)
T ss_dssp -----CCCEEEEECCSHHHHHHHHHHHT-TSEEE-EECS----------CHHHHHHHH---TTCCSSCCHHHHHHHHHSC
T ss_pred cccccCCCEEEEECcCHHHHHHHHHHHc-CCeEE-EEec----------CHHHhhHHh---ccCCccccccHHHHHhhcc
Confidence 3444555799999999999999999987 99864 4564 334433222 11111 1111000 0
Q ss_pred CCceeeCCCCccccccceEecCCCcCcc------c----hhhHHHh--hhcCceEEEeCCCCC-CCHHHHHHHHHCCceE
Q 006671 484 ARSKYYDEAKPWNERCDVAFPCASQNEI------D----QSDAINL--VNSGCRILVEGSNMP-CTPEAVDVLKKANVLI 550 (636)
Q Consensus 484 p~a~~i~~~eil~~~cDIliPcA~~n~I------t----~enA~~l--~~~~akiVvEgAN~P-~T~eA~~iL~~rGIlv 550 (636)
.+.++.++-+-.-.+||++|-|...+.- + .+.+..| ++.++-+|.+..--| +|.+..+.|.+.++.+
T Consensus 95 ~~l~~ttd~~ea~~~aDvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~l~~g~iVV~~STv~pgtt~~l~~~l~~~~v~~ 174 (432)
T 3pid_A 95 LNFRATTDKHDAYRNADYVIIATPTDYDPKTNYFNTSTVEAVIRDVTEINPNAVMIIKSTIPVGFTRDIKERLGIDNVIF 174 (432)
T ss_dssp CCEEEESCHHHHHTTCSEEEECCCCEEETTTTEEECHHHHHHHHHHHHHCTTSEEEECSCCCTTHHHHHHHHHTCCCEEE
T ss_pred CCeEEEcCHHHHHhCCCEEEEeCCCccccccccccHHHHHHHHHHHHhcCCCcEEEEeCCCChHHHHHHHHHHhhccEee
Confidence 0122222100112379999988776521 1 1111222 244677777777666 5566677888899999
Q ss_pred eccccccccc
Q 006671 551 APAMAAGAGG 560 (636)
Q Consensus 551 iPD~~aNAGG 560 (636)
.|.++ +.|+
T Consensus 175 sPe~~-~~G~ 183 (432)
T 3pid_A 175 SPEFL-REGR 183 (432)
T ss_dssp CCCCC-CTTS
T ss_pred cCccC-Ccch
Confidence 99886 4444
No 162
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=94.53 E-value=0.032 Score=56.80 Aligned_cols=107 Identities=15% Similarity=0.185 Sum_probs=68.4
Q ss_pred cEEEEecCccHHHHHHHHHHHC-CCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceee-CCCCc
Q 006671 417 LRCVVSGSGKIAMHVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYY-DEAKP 494 (636)
Q Consensus 417 krVaIqGfGNVG~~aAe~L~e~-GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i-~~~ei 494 (636)
.+|.|+|+|++|...++.|.+. +.++++|+|. |.+.+. . +.+ . .... +.+++
T Consensus 11 ~~igiIG~G~~g~~~~~~l~~~~~~~~v~v~d~----------~~~~~~---~-------~~~---~---~~~~~~~~~~ 64 (315)
T 3c1a_A 11 VRLALIGAGRWGKNYIRTIAGLPGAALVRLASS----------NPDNLA---L-------VPP---G---CVIESDWRSV 64 (315)
T ss_dssp EEEEEEECTTTTTTHHHHHHHCTTEEEEEEEES----------CHHHHT---T-------CCT---T---CEEESSTHHH
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCcEEEEEEeC----------CHHHHH---H-------HHh---h---CcccCCHHHH
Confidence 6899999999999999999885 7889999997 222210 0 110 0 1112 22345
Q ss_pred cc-cccceEecCCCcCccchhhHHHhhhcCceEEEeCCCCCCCH-HHHH---HHHHCCceEe
Q 006671 495 WN-ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTP-EAVD---VLKKANVLIA 551 (636)
Q Consensus 495 l~-~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~-eA~~---iL~~rGIlvi 551 (636)
+. .++|+++-|.. +..+.+.+...++.|..+++|-- +-+|. ++.+ ..+++|+.+.
T Consensus 65 l~~~~~D~V~i~tp-~~~h~~~~~~al~~Gk~v~~eKP-~~~~~~~~~~l~~~a~~~g~~~~ 124 (315)
T 3c1a_A 65 VSAPEVEAVIIATP-PATHAEITLAAIASGKAVLVEKP-LTLDLAEAEAVAAAAKATGVMVW 124 (315)
T ss_dssp HTCTTCCEEEEESC-GGGHHHHHHHHHHTTCEEEEESS-SCSCHHHHHHHHHHHHHHCCCEE
T ss_pred hhCCCCCEEEEeCC-hHHHHHHHHHHHHCCCcEEEcCC-CcCCHHHHHHHHHHHHHcCCEEE
Confidence 53 47999998875 55567777777788989999841 12343 3333 3356676554
No 163
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=94.48 E-value=0.14 Score=52.99 Aligned_cols=112 Identities=17% Similarity=0.178 Sum_probs=71.5
Q ss_pred CCCcEEEEecCccHHHHHHHHHHH-CCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeCC-
Q 006671 414 LKGLRCVVSGSGKIAMHVLEKLIA-YGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE- 491 (636)
Q Consensus 414 l~GkrVaIqGfGNVG~~aAe~L~e-~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~~- 491 (636)
...+++.|.|.|.+|...++.|.+ .+.+.|.|.|. +.++.+.+.+.....+ + ... .+.
T Consensus 123 ~~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r----------~~~~a~~la~~~~~~~-~--------~~~-~~~~ 182 (322)
T 1omo_A 123 KNSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDV----------REKAAKKFVSYCEDRG-I--------SAS-VQPA 182 (322)
T ss_dssp TTCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECS----------SHHHHHHHHHHHHHTT-C--------CEE-ECCH
T ss_pred CCCCEEEEEcCcHHHHHHHHHHHHhCCccEEEEECC----------CHHHHHHHHHHHHhcC-c--------eEE-ECCH
Confidence 367899999999999999998887 56777888886 3444433332111111 0 112 221
Q ss_pred CCccccccceEecCCCcCc--cchhhHHHhhhcCceEEEeCCCCCCCHHHHHHHHHCCceEe
Q 006671 492 AKPWNERCDVAFPCASQNE--IDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANVLIA 551 (636)
Q Consensus 492 ~eil~~~cDIliPcA~~n~--It~enA~~l~~~~akiVvEgAN~P~T~eA~~iL~~rGIlvi 551 (636)
++.. ++||++-|..... ++. ..++.++.+++.|+..|...|.+..+.+++..|+
T Consensus 183 ~e~v--~aDvVi~aTp~~~pv~~~----~~l~~G~~V~~ig~~~p~~~el~~~~~~~a~v~v 238 (322)
T 1omo_A 183 EEAS--RCDVLVTTTPSRKPVVKA----EWVEEGTHINAIGADGPGKQELDVEILKKAKIVV 238 (322)
T ss_dssp HHHT--SSSEEEECCCCSSCCBCG----GGCCTTCEEEECSCCSTTCCCBCHHHHHTEEEEE
T ss_pred HHHh--CCCEEEEeeCCCCceecH----HHcCCCeEEEECCCCCCCccccCHHHHhcCeEEE
Confidence 2334 7999998887532 222 1235689999999999977676555666665444
No 164
>3hja_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; niaid, ssgcid, decode, UW, SBRI, LYME disease, non-hodgkin lymphomas, cytoplasm; HET: NAD; 2.20A {Borrelia burgdorferi B31}
Probab=94.47 E-value=0.082 Score=56.29 Aligned_cols=103 Identities=17% Similarity=0.285 Sum_probs=64.5
Q ss_pred CcEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccc------cCC--ce
Q 006671 416 GLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKT------YAR--SK 487 (636)
Q Consensus 416 GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~------~p~--a~ 487 (636)
..+|+|-|||-||+.+.+.|.+....||+|.|. .|.+.+..|+++-...|++..-.+. +.+ .+
T Consensus 21 ~~kVaInGfGrIGr~vlr~l~e~~~~ivaIndl---------~d~~~~a~llkydS~hG~f~~~v~~~~~~l~i~Gk~I~ 91 (356)
T 3hja_A 21 SMKLAINGFGRIGRNVFKIAFERGIDIVAINDL---------TDPKTLAHLLKYDSTFGVYNKKVESRDGAIVVDGREIK 91 (356)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEECS---------SCHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEE
T ss_pred CeEEEEECCCHHHHHHHHHHHHCCCCEEEEeCC---------CCHHHhhhhhccccCCCCCCCCEEEcCCEEEECCEEEE
Confidence 468999999999999999999989999999985 3666655555432222322211100 111 11
Q ss_pred eeC---CCC-cc-ccccceEecCCCcCccc----hhhHHHhhh-cCce-EEE
Q 006671 488 YYD---EAK-PW-NERCDVAFPCASQNEID----QSDAINLVN-SGCR-ILV 528 (636)
Q Consensus 488 ~i~---~~e-il-~~~cDIliPcA~~n~It----~enA~~l~~-~~ak-iVv 528 (636)
... +++ .| +..+||++.|+. .-.+ .+.|..-++ .||| +|+
T Consensus 92 v~~~~dp~~i~w~~~gvDiV~esTG-~f~s~~~~~e~a~~hl~~aGAkkVVI 142 (356)
T 3hja_A 92 IIAERDPKNLPWAKLGIDVVIESTG-VFSSATSDKGGYLDHVNHAGAKKVIL 142 (356)
T ss_dssp EECCSSGGGCCHHHHTCSEEEECSS-SCCSSCCTTCCGGGGTTTSCCSEEEE
T ss_pred EEEcCChhhCCccccCCCEEEEecc-cccccchhHHHHHHHHHhCCCeEEEE
Confidence 121 111 35 468999999974 4456 677777667 7886 444
No 165
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=94.41 E-value=0.055 Score=55.32 Aligned_cols=117 Identities=13% Similarity=0.171 Sum_probs=74.1
Q ss_pred CcEEEEec-CccHHHHHHHHHHH-CCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeCC-C
Q 006671 416 GLRCVVSG-SGKIAMHVLEKLIA-YGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE-A 492 (636)
Q Consensus 416 GkrVaIqG-fGNVG~~aAe~L~e-~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~~-~ 492 (636)
-.||+|.| +|.+|+.+++.+.+ .+..+|++.|.++.- ..|.|..++ .... ++....++ +
T Consensus 7 mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~--~~G~d~gel-------------~g~~---~gv~v~~dl~ 68 (272)
T 4f3y_A 7 SMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSP--QLGQDAGAF-------------LGKQ---TGVALTDDIE 68 (272)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCT--TTTSBTTTT-------------TTCC---CSCBCBCCHH
T ss_pred ccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcc--cccccHHHH-------------hCCC---CCceecCCHH
Confidence 36899999 89999999998876 578999999985421 135554332 0100 11111111 2
Q ss_pred CccccccceEecCCCcCccchhhHHHhhhcCceEEEeCCCCCCCHHHHHHHHH----CCceEeccc
Q 006671 493 KPWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKK----ANVLIAPAM 554 (636)
Q Consensus 493 eil~~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~~iL~~----rGIlviPD~ 554 (636)
+++. ++||+|-++.... ..+++...++++.++|++- -..|++..+.|++ .+++|.|.+
T Consensus 69 ~ll~-~~DVVIDfT~p~a-~~~~~~~al~~G~~vVigT--TG~s~~~~~~L~~aa~~~~vv~a~N~ 130 (272)
T 4f3y_A 69 RVCA-EADYLIDFTLPEG-TLVHLDAALRHDVKLVIGT--TGFSEPQKAQLRAAGEKIALVFSANM 130 (272)
T ss_dssp HHHH-HCSEEEECSCHHH-HHHHHHHHHHHTCEEEECC--CCCCHHHHHHHHHHTTTSEEEECSCC
T ss_pred HHhc-CCCEEEEcCCHHH-HHHHHHHHHHcCCCEEEEC--CCCCHHHHHHHHHHhccCCEEEECCC
Confidence 2333 7999999985443 4567777788899999843 3467765555543 345555554
No 166
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=94.41 E-value=0.036 Score=56.28 Aligned_cols=106 Identities=15% Similarity=0.150 Sum_probs=64.3
Q ss_pred cEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeC-CCCcc
Q 006671 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD-EAKPW 495 (636)
Q Consensus 417 krVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~-~~eil 495 (636)
++|.|.|+|++|..+|+.|.+.|..| .+.|. +++-++ + +. +. +++..+ .+++.
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~~G~~V-~~~dr-----~~~~~~--~---~~---~~------------g~~~~~~~~~~~ 69 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTEWPGGV-TVYDI-----RIEAMT--P---LA---EA------------GATLADSVADVA 69 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTTSTTCE-EEECS-----STTTSH--H---HH---HT------------TCEECSSHHHHT
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeE-EEEeC-----CHHHHH--H---HH---HC------------CCEEcCCHHHHH
Confidence 58999999999999999999999985 55565 443321 1 21 11 122221 12334
Q ss_pred ccccceEecCCCcCccchhhHHHhhh---cCceEEEeCCCC-C-CCHHHHHHHHHCCceEe
Q 006671 496 NERCDVAFPCASQNEIDQSDAINLVN---SGCRILVEGSNM-P-CTPEAVDVLKKANVLIA 551 (636)
Q Consensus 496 ~~~cDIliPcA~~n~It~enA~~l~~---~~akiVvEgAN~-P-~T~eA~~iL~~rGIlvi 551 (636)
. ||++|-|........+....+.. .+ ++|+..++. | ++.+..+.+.++|+.|+
T Consensus 70 ~--aDvvi~~vp~~~~~~~v~~~l~~~l~~g-~ivv~~st~~~~~~~~~~~~~~~~g~~~~ 127 (296)
T 3qha_A 70 A--ADLIHITVLDDAQVREVVGELAGHAKPG-TVIAIHSTISDTTAVELARDLKARDIHIV 127 (296)
T ss_dssp T--SSEEEECCSSHHHHHHHHHHHHTTCCTT-CEEEECSCCCHHHHHHHHHHHGGGTCEEE
T ss_pred h--CCEEEEECCChHHHHHHHHHHHHhcCCC-CEEEEeCCCCHHHHHHHHHHHHHcCCEEE
Confidence 4 99999988755333333344432 23 455555554 3 33445567788898876
No 167
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=94.40 E-value=0.25 Score=50.39 Aligned_cols=119 Identities=14% Similarity=0.172 Sum_probs=71.6
Q ss_pred chhHHHHHHHHHHHHhCCCCCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcC
Q 006671 395 TGYGLVFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQR 474 (636)
Q Consensus 395 TG~GV~~~~~~~l~~~g~~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g 474 (636)
-|+|.+.++++ .+ |+++.|.|.|.+|+.++..|.+.|.+ |.|.+. +++ +...|.++ +
T Consensus 105 D~~Gf~~~L~~----~~----~k~vlvlGaGGaaraia~~L~~~G~~-v~V~nR-----t~~-----ka~~la~~----~ 161 (269)
T 3phh_A 105 DALGFYLSLKQ----KN----YQNALILGAGGSAKALACELKKQGLQ-VSVLNR-----SSR-----GLDFFQRL----G 161 (269)
T ss_dssp HHHHHHHHCC-----------CCEEEEECCSHHHHHHHHHHHHTTCE-EEEECS-----SCT-----THHHHHHH----T
T ss_pred hHHHHHHHHHH----cC----CCEEEEECCCHHHHHHHHHHHHCCCE-EEEEeC-----CHH-----HHHHHHHC----C
Confidence 36777666654 22 89999999999999999999999966 677776 222 22112211 1
Q ss_pred CccccccccCCceeeCCCCccccccceEecCCCcC-----ccchhhHH-HhhhcCceEEEeCCCCCCCHHHHHHHHHCCc
Q 006671 475 SLRDYSKTYARSKYYDEAKPWNERCDVAFPCASQN-----EIDQSDAI-NLVNSGCRILVEGSNMPCTPEAVDVLKKANV 548 (636)
Q Consensus 475 ~l~~y~~~~p~a~~i~~~eil~~~cDIliPcA~~n-----~It~enA~-~l~~~~akiVvEgAN~P~T~eA~~iL~~rGI 548 (636)
.+..+-+++ . ++||+|-|..-+ .++.+-.. .+ . ...+|++-.-.|-|+ -.+..+++|+
T Consensus 162 -----------~~~~~~~~l-~-~~DiVInaTp~Gm~~~~~l~~~~l~~~l-~-~~~~v~D~vY~P~T~-ll~~A~~~G~ 225 (269)
T 3phh_A 162 -----------CDCFMEPPK-S-AFDLIINATSASLHNELPLNKEVLKGYF-K-EGKLAYDLAYGFLTP-FLSLAKELKT 225 (269)
T ss_dssp -----------CEEESSCCS-S-CCSEEEECCTTCCCCSCSSCHHHHHHHH-H-HCSEEEESCCSSCCH-HHHHHHHTTC
T ss_pred -----------CeEecHHHh-c-cCCEEEEcccCCCCCCCCCChHHHHhhC-C-CCCEEEEeCCCCchH-HHHHHHHCcC
Confidence 122222222 2 899999665433 34433111 22 1 346888988888444 5556678876
Q ss_pred eEec
Q 006671 549 LIAP 552 (636)
Q Consensus 549 lviP 552 (636)
.+++
T Consensus 226 ~~~~ 229 (269)
T 3phh_A 226 PFQD 229 (269)
T ss_dssp CEEC
T ss_pred EEEC
Confidence 6553
No 168
>2b4r_O Glyceraldehyde-3-phosphate dehydrogenase; SGPP, structural genomics, PSI, structural genomi pathogenic protozoa consortium; HET: NAD AES; 2.25A {Plasmodium falciparum} SCOP: c.2.1.3 d.81.1.1 PDB: 2b4t_O* 1ywg_O*
Probab=94.40 E-value=0.13 Score=54.58 Aligned_cols=108 Identities=14% Similarity=0.261 Sum_probs=67.0
Q ss_pred CCCCcEEEEecCccHHHHHHHHHHHC-CCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccc------cCC
Q 006671 413 ELKGLRCVVSGSGKIAMHVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKT------YAR 485 (636)
Q Consensus 413 ~l~GkrVaIqGfGNVG~~aAe~L~e~-GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~------~p~ 485 (636)
.+.-.||.|=|||-+|+.+++.+.+. ...||+|.|.- .|.+-+..|+++....|.+..-.+. +.+
T Consensus 8 ~~~~~kv~INGfGrIGr~v~ra~~~~~~~evvaInd~~--------~~~~~~a~l~~yDS~hg~~~~~v~~~~~~l~v~G 79 (345)
T 2b4r_O 8 HMAATKLGINGFGRIGRLVFRAAFGRKDIEVVAINDPF--------MDLNHLCYLLKYDSVHGQFPCEVTHADGFLLIGE 79 (345)
T ss_dssp ---CEEEEEECCSHHHHHHHHHHHTCSSEEEEEEECTT--------CCHHHHHHHHHCCTTTCSCSSCEEEETTEEEESS
T ss_pred chhheEEEEeCCchHHHHHHHHHhhCCCcEEEEEcCCC--------CChHHHHHHhccCCCCCcCCCCEEEcCCEEEECC
Confidence 45678999999999999999998875 46899999841 2555554455443333433221110 001
Q ss_pred --ceeeC---CCC-cc-ccccceEecCCCcCccchhhHHHhhhcCce-EEEe
Q 006671 486 --SKYYD---EAK-PW-NERCDVAFPCASQNEIDQSDAINLVNSGCR-ILVE 529 (636)
Q Consensus 486 --a~~i~---~~e-il-~~~cDIliPcA~~n~It~enA~~l~~~~ak-iVvE 529 (636)
.+.+. +++ .| +..+||++.|+ +..++.+.|+..++.||| +|+-
T Consensus 80 k~i~v~~~~dp~~~~w~~~gvDiV~est-G~f~s~e~a~~hl~aGakkVVIs 130 (345)
T 2b4r_O 80 KKVSVFAEKDPSQIPWGKCQVDVVCEST-GVFLTKELASSHLKGGAKKVIMS 130 (345)
T ss_dssp CEEEEECCSSGGGCCHHHHTCSEEEECS-SSCCSHHHHTHHHHTTCSEEEES
T ss_pred EEEEEEEcCCcccCcccccCCCEEEECc-CccccHhhHHHHHHCCCCEEEEC
Confidence 11111 111 24 34899999987 667788888888888987 4553
No 169
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=94.33 E-value=0.15 Score=52.16 Aligned_cols=107 Identities=14% Similarity=0.112 Sum_probs=66.3
Q ss_pred CcEEEEecCccHHHHHHHHHHH-CCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeCCCCc
Q 006671 416 GLRCVVSGSGKIAMHVLEKLIA-YGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKP 494 (636)
Q Consensus 416 GkrVaIqGfGNVG~~aAe~L~e-~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~~~ei 494 (636)
-.||+|+|+|++|...++.|.+ .+.++++|.|. +|+ .+ .. .+ +. | . .+ +++
T Consensus 9 ~irv~IIG~G~iG~~~~~~l~~~~~~elvav~d~-----~~~-----~~---~~----~g-~~-~----~---~~--~~l 60 (304)
T 3bio_A 9 KIRAAIVGYGNIGRYALQALREAPDFEIAGIVRR-----NPA-----EV---PF----EL-QP-F----R---VV--SDI 60 (304)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECC------------------------CC-TT-S----C---EE--SSG
T ss_pred CCEEEEECChHHHHHHHHHHhcCCCCEEEEEEcC-----CHH-----HH---HH----cC-CC-c----C---CH--HHH
Confidence 4699999999999999999887 57899999997 332 11 00 11 11 1 0 11 122
Q ss_pred cc-cccceEecCCCcCccchhhHHHhhhcCceEEEeCCC-CCCCHHHH---HHHHHCCceEe
Q 006671 495 WN-ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSN-MPCTPEAV---DVLKKANVLIA 551 (636)
Q Consensus 495 l~-~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgAN-~P~T~eA~---~iL~~rGIlvi 551 (636)
.+ .++|+++-|+. +..+.+.+..+++.|..+|+|--- .+...++. +..+++|+.+.
T Consensus 61 ~~~~~~DvViiatp-~~~h~~~~~~al~aG~~Vi~ekP~~a~~~~~~~~l~~~a~~~g~~~~ 121 (304)
T 3bio_A 61 EQLESVDVALVCSP-SREVERTALEILKKGICTADSFDIHDGILALRRSLGDAAGKSGAAAV 121 (304)
T ss_dssp GGSSSCCEEEECSC-HHHHHHHHHHHHTTTCEEEECCCCGGGHHHHHHHHHHHHHHHTCEEE
T ss_pred HhCCCCCEEEECCC-chhhHHHHHHHHHcCCeEEECCCCCCCCHHHHHHHHHHHHhCCCEEE
Confidence 22 47999998774 556778888888889999998311 11222333 44456676544
No 170
>3cmc_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; microspectrophotometry, reaction intermediate, dehydrogenase phosphate binding site; HET: G3H NAD; 1.77A {Bacillus stearothermophilus} SCOP: c.2.1.3 d.81.1.1 PDB: 2gd1_O 1gd1_O* 1npt_O* 1nqa_O* 1nqo_O* 1nq5_O* 2dbv_O* 1dbv_O* 3dbv_O* 4dbv_O*
Probab=94.29 E-value=0.11 Score=54.69 Aligned_cols=103 Identities=17% Similarity=0.251 Sum_probs=63.1
Q ss_pred cEEEEecCccHHHHHHHHHHHC-CCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCcccccc----c--cCC--ce
Q 006671 417 LRCVVSGSGKIAMHVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSK----T--YAR--SK 487 (636)
Q Consensus 417 krVaIqGfGNVG~~aAe~L~e~-GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~----~--~p~--a~ 487 (636)
.||+|.|||-+|+.+++.|.+. ...||+|.|. .|.+.+..+.++....|.+..-.. . +.+ .+
T Consensus 2 ikVgI~G~G~iGr~l~R~l~~~~~veivain~~---------~~~~~~~~ll~~ds~~G~~~~~v~~~~~~l~v~g~~i~ 72 (334)
T 3cmc_O 2 VKVGINGFGRIGRNVFRAALKNPDIEVVAVNDL---------TDANTLAHLLKYDSVHGRLDAEVSVNGNNLVVNGKEII 72 (334)
T ss_dssp EEEEEESCSHHHHHHHHHHTTCTTEEEEEEECS---------SCHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEE
T ss_pred eEEEEECCCHHHHHHHHHHhCCCCeEEEEEeCC---------CCHHHHHHHhccCCcCCCcCceEEEccCcEEECCEEEE
Confidence 4799999999999999999876 6799999985 244444444433232232211000 0 011 12
Q ss_pred ee---CCCCc-cc-cccceEecCCCcCccchhhHHHhhhcCce-EEEe
Q 006671 488 YY---DEAKP-WN-ERCDVAFPCASQNEIDQSDAINLVNSGCR-ILVE 529 (636)
Q Consensus 488 ~i---~~~ei-l~-~~cDIliPcA~~n~It~enA~~l~~~~ak-iVvE 529 (636)
.. +++++ |. ..|||++.|+ +.-.+.+.|+..++.||| +|+.
T Consensus 73 v~~~~dp~~i~w~~~~vDvV~~at-g~~~s~e~a~~~l~~Gak~vVId 119 (334)
T 3cmc_O 73 VKAERDPENLAWGEIGVDIVVEST-GRFTKREDAAKHLEAGAKKVIIS 119 (334)
T ss_dssp EECCSSGGGCCTGGGTCCEEEECS-SSCCBHHHHTHHHHTTCSEEEES
T ss_pred EEecCChhhcCcccCccCEEEECC-CchhhHHHHHHHHHCCCCEEEEe
Confidence 22 12223 64 5899999986 455678888888888883 4443
No 171
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=94.21 E-value=0.098 Score=57.32 Aligned_cols=118 Identities=10% Similarity=-0.013 Sum_probs=70.9
Q ss_pred CCCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeC-C
Q 006671 413 ELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD-E 491 (636)
Q Consensus 413 ~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~-~ 491 (636)
.+..++|.|.|.|++|..+|..|.+.|..| .+.|. +.++++.+.+ ..+. ++....+ .
T Consensus 12 ~~~~~~IgvIGlG~MG~~lA~~La~~G~~V-~v~~r----------~~~~~~~l~~---~~~~--------~gi~~~~s~ 69 (480)
T 2zyd_A 12 HMSKQQIGVVGMAVMGRNLALNIESRGYTV-SIFNR----------SREKTEEVIA---ENPG--------KKLVPYYTV 69 (480)
T ss_dssp ---CBSEEEECCSHHHHHHHHHHHTTTCCE-EEECS----------SHHHHHHHHH---HSTT--------SCEEECSSH
T ss_pred ccCCCeEEEEccHHHHHHHHHHHHhCCCeE-EEEeC----------CHHHHHHHHh---hCCC--------CCeEEeCCH
Confidence 456778999999999999999999999984 55564 3344332322 1110 1222111 1
Q ss_pred CCcccc--ccceEecCCCcCccchhhHHHhhh-c-CceEEEeCCCCC--CCHHHHHHHHHCCceEec
Q 006671 492 AKPWNE--RCDVAFPCASQNEIDQSDAINLVN-S-GCRILVEGSNMP--CTPEAVDVLKKANVLIAP 552 (636)
Q Consensus 492 ~eil~~--~cDIliPcA~~n~It~enA~~l~~-~-~akiVvEgAN~P--~T~eA~~iL~~rGIlviP 552 (636)
+++... +||++|-|-.......+.+..|.. . .-.+|+..+|.. .|.+..+.|.++|+.++.
T Consensus 70 ~e~v~~l~~aDvVil~Vp~~~~v~~vl~~l~~~l~~g~iIId~s~g~~~~t~~l~~~l~~~g~~~v~ 136 (480)
T 2zyd_A 70 KEFVESLETPRRILLMVKAGAGTDAAIDSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGFNFIG 136 (480)
T ss_dssp HHHHHTBCSSCEEEECSCSSSHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHhCCCCCCEEEEECCCHHHHHHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHCCCCeeC
Confidence 122221 489999888775444444444432 1 235788899976 344556778888998873
No 172
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=94.19 E-value=0.34 Score=44.51 Aligned_cols=112 Identities=14% Similarity=0.129 Sum_probs=66.9
Q ss_pred CcEEEEecC----ccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeC-
Q 006671 416 GLRCVVSGS----GKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD- 490 (636)
Q Consensus 416 GkrVaIqGf----GNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~- 490 (636)
-++|+|+|. |++|..+++.|.+.|.+|..| ||+.. ...+. +.+..+
T Consensus 13 p~~IavIGas~~~g~~G~~~~~~L~~~G~~v~~v--------np~~~--------------g~~i~-------G~~~~~s 63 (145)
T 2duw_A 13 TRTIALVGASDKPDRPSYRVMKYLLDQGYHVIPV--------SPKVA--------------GKTLL-------GQQGYAT 63 (145)
T ss_dssp CCCEEEESCCSCTTSHHHHHHHHHHHHTCCEEEE--------CSSST--------------TSEET-------TEECCSS
T ss_pred CCEEEEECcCCCCCChHHHHHHHHHHCCCEEEEe--------CCccc--------------ccccC-------CeeccCC
Confidence 467999999 899999999999999984433 33211 00010 111111
Q ss_pred CCCccccccceEecCCCcCccchhhHHHhhhcCceEE-EeCCCCCCCHHHHHHHHHCCceEe-cccccccccceee
Q 006671 491 EAKPWNERCDVAFPCASQNEIDQSDAINLVNSGCRIL-VEGSNMPCTPEAVDVLKKANVLIA-PAMAAGAGGVVAG 564 (636)
Q Consensus 491 ~~eil~~~cDIliPcA~~n~It~enA~~l~~~~akiV-vEgAN~P~T~eA~~iL~~rGIlvi-PD~~aNAGGVivS 564 (636)
-+++ ..++|+++-|... ....+-+..+++.+++.| +.. +-.+.+..+.++++|+.++ | |+=|++..
T Consensus 64 l~el-~~~~Dlvii~vp~-~~v~~v~~~~~~~g~~~i~i~~--~~~~~~l~~~a~~~Gi~~igp----nc~g~~~~ 131 (145)
T 2duw_A 64 LADV-PEKVDMVDVFRNS-EAAWGVAQEAIAIGAKTLWLQL--GVINEQAAVLAREAGLSVVMD----RCPAIELP 131 (145)
T ss_dssp TTTC-SSCCSEEECCSCS-THHHHHHHHHHHHTCCEEECCT--TCCCHHHHHHHHTTTCEEECS----CCHHHHST
T ss_pred HHHc-CCCCCEEEEEeCH-HHHHHHHHHHHHcCCCEEEEcC--ChHHHHHHHHHHHcCCEEEcC----CeeeEEcc
Confidence 1222 2367888887663 444444555555565544 332 2246788889999999887 4 44455443
No 173
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=94.19 E-value=0.22 Score=41.94 Aligned_cols=33 Identities=27% Similarity=0.287 Sum_probs=28.1
Q ss_pred CCcEEEEecCccHHHHHHHHHHHCC-CEEEEEeCC
Q 006671 415 KGLRCVVSGSGKIAMHVLEKLIAYG-AIPVSVSDA 448 (636)
Q Consensus 415 ~GkrVaIqGfGNVG~~aAe~L~e~G-AkVVaVSDs 448 (636)
.+++|+|.|.|.+|+.+++.|.+.| .+ |.+.|.
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~~-v~~~~r 37 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTSSNYS-VTVADH 37 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHCSSEE-EEEEES
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCCCce-EEEEeC
Confidence 4689999999999999999999999 66 455564
No 174
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=94.19 E-value=0.024 Score=59.11 Aligned_cols=98 Identities=12% Similarity=0.186 Sum_probs=60.9
Q ss_pred cEEEEecCccHHHHHHHHHHHC-CCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCC---------c
Q 006671 417 LRCVVSGSGKIAMHVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYAR---------S 486 (636)
Q Consensus 417 krVaIqGfGNVG~~aAe~L~e~-GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~---------a 486 (636)
.||+|.|+|.+|+..++.|.+. +..+++|+|++ ++ .+..+.+ ..+ +.-|. .+++ .
T Consensus 3 irVgIiG~G~iG~~~~r~l~~~~~~elvav~d~~-----~~-----~~~~~~~---~~g-~~~~~-~~~~~v~~~~~~~~ 67 (334)
T 2czc_A 3 VKVGVNGYGTIGKRVAYAVTKQDDMELIGITKTK-----PD-----FEAYRAK---ELG-IPVYA-ASEEFIPRFEKEGF 67 (334)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCTTEEEEEEEESS-----CS-----HHHHHHH---HTT-CCEEE-SSGGGHHHHHHHTC
T ss_pred cEEEEEeEhHHHHHHHHHHhcCCCCEEEEEEcCC-----HH-----HHHHHHH---hcC-ccccc-cccccceeccCCce
Confidence 4899999999999999999875 67999999972 21 1111111 111 00000 0000 0
Q ss_pred eee-CCCCccccccceEecCCCcCccchhhHHHhhhcCceEEEeCC
Q 006671 487 KYY-DEAKPWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGS 531 (636)
Q Consensus 487 ~~i-~~~eil~~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgA 531 (636)
... +.++++. ++|+++-|+ .+..+.+.+...++.|+++|+|+-
T Consensus 68 ~v~~d~~~l~~-~vDvV~~aT-p~~~h~~~a~~~l~aGk~Vi~sap 111 (334)
T 2czc_A 68 EVAGTLNDLLE-KVDIIVDAT-PGGIGAKNKPLYEKAGVKAIFQGG 111 (334)
T ss_dssp CCSCBHHHHHT-TCSEEEECC-STTHHHHHHHHHHHHTCEEEECTT
T ss_pred EEcCcHHHhcc-CCCEEEECC-CccccHHHHHHHHHcCCceEeecc
Confidence 110 1122333 899999986 456677778777888999999864
No 175
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=94.18 E-value=0.15 Score=52.44 Aligned_cols=111 Identities=16% Similarity=0.214 Sum_probs=69.7
Q ss_pred cEEEEecCccHHHHHHHHHH-H-CCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeC-CCC
Q 006671 417 LRCVVSGSGKIAMHVLEKLI-A-YGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD-EAK 493 (636)
Q Consensus 417 krVaIqGfGNVG~~aAe~L~-e-~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~-~~e 493 (636)
.||.|+|+|++|...++.|. . .++++++|+|. |.+.+..+ .+..+- .....+ .++
T Consensus 3 ~rigiIG~G~~g~~~~~~l~~~~~~~~l~av~d~----------~~~~~~~~---~~~~g~---------~~~~~~~~~~ 60 (344)
T 3mz0_A 3 LRIGVIGTGAIGKEHINRITNKLSGAEIVAVTDV----------NQEAAQKV---VEQYQL---------NATVYPNDDS 60 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTCSSEEEEEEECS----------SHHHHHHH---HHHTTC---------CCEEESSHHH
T ss_pred EEEEEECccHHHHHHHHHHHhhCCCcEEEEEEcC----------CHHHHHHH---HHHhCC---------CCeeeCCHHH
Confidence 58999999999999999888 4 58899999997 33333212 111110 122222 234
Q ss_pred ccc-cccceEecCCCcCccchhhHHHhhhcCceEEEeCCCCCCCHHHHHHH---HHCCceE
Q 006671 494 PWN-ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVL---KKANVLI 550 (636)
Q Consensus 494 il~-~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~~iL---~~rGIlv 550 (636)
++. .++|+++-|. .+..+.+.+...++.|..+++|=-=.....++++++ +++|+.+
T Consensus 61 ll~~~~~D~V~i~t-p~~~h~~~~~~al~~Gk~vl~EKP~a~~~~e~~~l~~~a~~~g~~~ 120 (344)
T 3mz0_A 61 LLADENVDAVLVTS-WGPAHESSVLKAIKAQKYVFCEKPLATTAEGCMRIVEEEIKVGKRL 120 (344)
T ss_dssp HHHCTTCCEEEECS-CGGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHHSSCC
T ss_pred HhcCCCCCEEEECC-CchhHHHHHHHHHHCCCcEEEcCCCCCCHHHHHHHHHHHHHHCCEE
Confidence 443 4689998776 566677778777888889998852111223444333 5667644
No 176
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=94.16 E-value=0.095 Score=57.21 Aligned_cols=134 Identities=17% Similarity=0.084 Sum_probs=79.2
Q ss_pred HHHHHHHHhCCCCCCcEEEEecCccHHHHHHHHHHHCCC--EEEEEeC----CCCceeCCCCCCHHHHHHHHHHHhhcCC
Q 006671 402 FAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGA--IPVSVSD----AKGYLVDEDGFDYMKISFLRDIKSQQRS 475 (636)
Q Consensus 402 ~~~~~l~~~g~~l~GkrVaIqGfGNVG~~aAe~L~e~GA--kVVaVSD----s~G~IydpdGLDve~L~~L~~~k~~~g~ 475 (636)
++..+|+..|.++++++|+|.|.|..|..++..|.+.|+ +=|.|.| ++|.++..+. .++|. .++.
T Consensus 172 G~~~AL~~~g~~l~~~rvlvlGAGgAg~aia~~L~~~G~~~~~I~vvd~~~~R~G~~~~a~~--~~~L~---~~~~---- 242 (439)
T 2dvm_A 172 GLLNALKVVGKKISEITLALFGAGAAGFATLRILTEAGVKPENVRVVELVNGKPRILTSDLD--LEKLF---PYRG---- 242 (439)
T ss_dssp HHHHHHHHHTCCTTTCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEEEETTEEEECCTTSC--HHHHS---TTCH----
T ss_pred HHHHHHHHhCCCccCCEEEEECccHHHHHHHHHHHHcCCCcCeEEEEEccCCCcCccccccc--hhHHH---HHHH----
Confidence 445556667889999999999999999999999999998 4467888 8876655422 11111 1110
Q ss_pred ccccccccCCceeeCCCCccc--cccceEecCCCc--CccchhhHHHhhhcCceEEEeCCCCCCCHHHHHHHHHCCceEe
Q 006671 476 LRDYSKTYARSKYYDEAKPWN--ERCDVAFPCASQ--NEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANVLIA 551 (636)
Q Consensus 476 l~~y~~~~p~a~~i~~~eil~--~~cDIliPcA~~--n~It~enA~~l~~~~akiVvEgAN~P~T~eA~~iL~~rGIlvi 551 (636)
.|....... ....++.+ ..+||+|=|+.. +.++.+....+. .-.+|..-+|-.-|+-..+. +++|..++
T Consensus 243 --~~a~~~~~~--~~~~~L~e~l~~aDVlInaT~~~~G~~~~e~v~~m~--~~~iVfDLynP~~t~~~~~A-~~~G~~iv 315 (439)
T 2dvm_A 243 --WLLKKTNGE--NIEGGPQEALKDADVLISFTRPGPGVIKPQWIEKMN--EDAIVFPLANPVPEILPEEA-KKAGARIV 315 (439)
T ss_dssp --HHHTTSCTT--CCCSSHHHHHTTCSEEEECSCCCSSSSCHHHHTTSC--TTCEEEECCSSSCSSCHHHH-HHHTCSEE
T ss_pred --HHhhccccc--cccccHHHHhccCCEEEEcCCCccCCCChHHHHhcC--CCCEEEECCCCCCcchHHHH-HHcCCeEE
Confidence 010000000 00011111 258999999987 888876555442 34588888763324333332 23354443
No 177
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=94.11 E-value=0.061 Score=55.59 Aligned_cols=87 Identities=16% Similarity=0.260 Sum_probs=56.6
Q ss_pred CCCCcEEEEecCccHHH-HHHHHHHHC-CCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeC
Q 006671 413 ELKGLRCVVSGSGKIAM-HVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD 490 (636)
Q Consensus 413 ~l~GkrVaIqGfGNVG~-~aAe~L~e~-GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~ 490 (636)
+++-.||.|+|+|++|. ..++.|.+. +++|++|+|.+..- .|+ ..| -+
T Consensus 22 ~M~~~rvgiiG~G~ig~~~~~~~l~~~~~~~lvav~d~~~~~---~g~------------------~~~---------~~ 71 (330)
T 4ew6_A 22 SMSPINLAIVGVGKIVRDQHLPSIAKNANFKLVATASRHGTV---EGV------------------NSY---------TT 71 (330)
T ss_dssp CCCCEEEEEECCSHHHHHTHHHHHHHCTTEEEEEEECSSCCC---TTS------------------EEE---------SS
T ss_pred cCCCceEEEEecCHHHHHHHHHHHHhCCCeEEEEEEeCChhh---cCC------------------Ccc---------CC
Confidence 34557999999999998 567777764 89999999984211 111 101 11
Q ss_pred CCCccc--cccceEecCCCcCccchhhHHHhhhcCceEEEeC
Q 006671 491 EAKPWN--ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEG 530 (636)
Q Consensus 491 ~~eil~--~~cDIliPcA~~n~It~enA~~l~~~~akiVvEg 530 (636)
-++++. .++|+++-|.. +..+.+.+...++.|..++||=
T Consensus 72 ~~~ll~~~~~vD~V~i~tp-~~~H~~~~~~al~aGkhVl~EK 112 (330)
T 4ew6_A 72 IEAMLDAEPSIDAVSLCMP-PQYRYEAAYKALVAGKHVFLEK 112 (330)
T ss_dssp HHHHHHHCTTCCEEEECSC-HHHHHHHHHHHHHTTCEEEECS
T ss_pred HHHHHhCCCCCCEEEEeCC-cHHHHHHHHHHHHcCCcEEEeC
Confidence 123343 35777776554 5566777777777788888874
No 178
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=94.08 E-value=0.095 Score=56.31 Aligned_cols=115 Identities=16% Similarity=0.213 Sum_probs=70.9
Q ss_pred CCcEEEEecCccHHH-HHHHHHHHC-CCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceee-CC
Q 006671 415 KGLRCVVSGSGKIAM-HVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYY-DE 491 (636)
Q Consensus 415 ~GkrVaIqGfGNVG~-~aAe~L~e~-GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i-~~ 491 (636)
+-.+|.|+|+|++|+ ..++.|.+. ++++|+|+|. |.+.+..+ .+..+ +.. .+.... +.
T Consensus 82 ~~irigiIG~G~~g~~~~~~~l~~~~~~~lvav~d~----------~~~~~~~~---a~~~g-~~~-----~~~~~~~~~ 142 (433)
T 1h6d_A 82 RRFGYAIVGLGKYALNQILPGFAGCQHSRIEALVSG----------NAEKAKIV---AAEYG-VDP-----RKIYDYSNF 142 (433)
T ss_dssp CCEEEEEECCSHHHHHTHHHHTTTCSSEEEEEEECS----------CHHHHHHH---HHHTT-CCG-----GGEECSSSG
T ss_pred CceEEEEECCcHHHHHHHHHHHhhCCCcEEEEEEcC----------CHHHHHHH---HHHhC-CCc-----ccccccCCH
Confidence 346899999999997 777777764 6899999997 23332212 11111 100 001111 22
Q ss_pred CCccc-cccceEecCCCcCccchhhHHHhhhcCceEEEeCCCCCC--C-HHHHH---HHHHCCceEec
Q 006671 492 AKPWN-ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPC--T-PEAVD---VLKKANVLIAP 552 (636)
Q Consensus 492 ~eil~-~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgAN~P~--T-~eA~~---iL~~rGIlviP 552 (636)
++++. .++|+++-|.. +..+.+.+...++.|..++||= |+ | .++.+ ..+++|+.+.-
T Consensus 143 ~~ll~~~~vD~V~iatp-~~~h~~~~~~al~aGk~Vl~EK---Pla~~~~e~~~l~~~a~~~g~~~~v 206 (433)
T 1h6d_A 143 DKIAKDPKIDAVYIILP-NSLHAEFAIRAFKAGKHVMCEK---PMATSVADCQRMIDAAKAANKKLMI 206 (433)
T ss_dssp GGGGGCTTCCEEEECSC-GGGHHHHHHHHHHTTCEEEECS---SCCSSHHHHHHHHHHHHHHTCCEEE
T ss_pred HHHhcCCCCCEEEEcCC-chhHHHHHHHHHHCCCcEEEcC---CCCCCHHHHHHHHHHHHHhCCeEEE
Confidence 44554 47999998874 5567777877788899999984 42 3 33433 33567876643
No 179
>3doc_A Glyceraldehyde 3-phosphate dehydrogenase; ssgcid, structural genomics, PSI, protein structure initiative; HET: NAD; 2.40A {Brucella melitensis biovar ABORTUS2308} PDB: 3l0d_A*
Probab=94.07 E-value=0.14 Score=54.04 Aligned_cols=101 Identities=19% Similarity=0.307 Sum_probs=66.0
Q ss_pred cEEEEecCccHHHHHHHHHHHC---CCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccc------cCC--
Q 006671 417 LRCVVSGSGKIAMHVLEKLIAY---GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKT------YAR-- 485 (636)
Q Consensus 417 krVaIqGfGNVG~~aAe~L~e~---GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~------~p~-- 485 (636)
.||.|-|||-+|+.+.+.+.+. ...||+|.|. .|.+.+..|+++-...|++..-++. +.+
T Consensus 3 ~kv~INGfGrIGr~v~Ra~~~~~~~~~~ivaiNd~---------~d~~~~a~l~kyDS~hG~f~~~v~~~~~~l~i~Gk~ 73 (335)
T 3doc_A 3 VRVAINGFGRIGRNILRAIVESGRTDIQVVAINDL---------GPVETNAHLLRYDSVHGRFPKEVEVAGDTIDVGYGP 73 (335)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCSEEEEEEECS---------SCHHHHHHHHHEETTTEECSSCCEECSSEEESSSSE
T ss_pred EEEEEECCCcHHHHHHHHHHhccCCCeEEEEEeCC---------CCHHHHHHHhcccCCCCCCCCeEEEecCEEEECCEE
Confidence 4899999999999999998886 4689999885 4677666665543333433221110 111
Q ss_pred ceee---CCCC-cc-ccccceEecCCCcCccchhhHHHhhhcCceEE
Q 006671 486 SKYY---DEAK-PW-NERCDVAFPCASQNEIDQSDAINLVNSGCRIL 527 (636)
Q Consensus 486 a~~i---~~~e-il-~~~cDIliPcA~~n~It~enA~~l~~~~akiV 527 (636)
.+.+ ++++ .| +..+|+++.|+ +.-.+.+-|+.-++.|||-|
T Consensus 74 I~v~~e~dp~~i~w~~~gvDiVlesT-G~f~s~e~a~~hl~aGAkkV 119 (335)
T 3doc_A 74 IKVHAVRNPAELPWKEENVDIALECT-GIFTSRDKAALHLEAGAKRV 119 (335)
T ss_dssp EEEECCSSTTSSCTTTTTCSEEEECS-SSCCSHHHHTHHHHTTCSEE
T ss_pred EEEEeecccccccccccCCCEEEEcc-CccCCHHHHHHHHHcCCCEE
Confidence 1111 1222 36 46899999997 55568888888778888533
No 180
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=94.06 E-value=0.076 Score=54.84 Aligned_cols=94 Identities=16% Similarity=0.126 Sum_probs=62.7
Q ss_pred CcEEEEecCccHHHHHHHHHHHC-CCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceee-CCCC
Q 006671 416 GLRCVVSGSGKIAMHVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYY-DEAK 493 (636)
Q Consensus 416 GkrVaIqGfGNVG~~aAe~L~e~-GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i-~~~e 493 (636)
-.||+|.|+||+|+..++.|.+. +..+|+|+|.+ ++. . + . + +.... +.++
T Consensus 3 ~irV~IiG~G~mG~~~~~~l~~~~~~elvav~d~~-----~~~-~---~-------------~-~-----gv~~~~d~~~ 54 (320)
T 1f06_A 3 NIRVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSRR-----ATL-D---T-------------K-T-----PVFDVADVDK 54 (320)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTCSSEEEEEEEESS-----SCC-S---S-------------S-S-----CEEEGGGGGG
T ss_pred CCEEEEEeecHHHHHHHHHHhcCCCCEEEEEEcCC-----HHH-h---h-------------c-C-----CCceeCCHHH
Confidence 35899999999999999998876 78999999973 221 1 0 0 1 11111 1233
Q ss_pred ccccccceEecCCCcCccchhhHHHhhhcCceEEEeCCCCCCCHHH
Q 006671 494 PWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEA 539 (636)
Q Consensus 494 il~~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA 539 (636)
++ .++|+++-|.... .+.+.+...++.+..+|+|-.=....+++
T Consensus 55 ll-~~~DvViiatp~~-~h~~~~~~al~aG~~Vv~ekp~~~~~~~~ 98 (320)
T 1f06_A 55 HA-DDVDVLFLCMGSA-TDIPEQAPKFAQFACTVDTYDNHRDIPRH 98 (320)
T ss_dssp TT-TTCSEEEECSCTT-THHHHHHHHHTTTSEEECCCCCGGGHHHH
T ss_pred Hh-cCCCEEEEcCCcH-HHHHHHHHHHHCCCEEEECCCCcCCHHHH
Confidence 44 5899999887554 36677777778899999986433333444
No 181
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=94.02 E-value=0.1 Score=53.69 Aligned_cols=115 Identities=10% Similarity=0.044 Sum_probs=70.5
Q ss_pred CCCcEEEEecCccHHHHHHHHHHHC--------CCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCC
Q 006671 414 LKGLRCVVSGSGKIAMHVLEKLIAY--------GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYAR 485 (636)
Q Consensus 414 l~GkrVaIqGfGNVG~~aAe~L~e~--------GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~ 485 (636)
++-.||.|+|+|.+|..-++.+... ++.|++|+|. |.+.+..+ .+. |+.
T Consensus 4 M~klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~----------~~~~a~~~---a~~----------~g~ 60 (390)
T 4h3v_A 4 MTNLGIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGR----------DAEAVRAA---AGK----------LGW 60 (390)
T ss_dssp CCEEEEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECS----------SHHHHHHH---HHH----------HTC
T ss_pred CCcCcEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEcC----------CHHHHHHH---HHH----------cCC
Confidence 3446999999999998766666542 4589999997 34443222 111 121
Q ss_pred ceeeCC-CCcc-ccccceEecCCCcCccchhhHHHhhhcCceEEEeCCCCCCCHHHHHH---H---HHCCceEec
Q 006671 486 SKYYDE-AKPW-NERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDV---L---KKANVLIAP 552 (636)
Q Consensus 486 a~~i~~-~eil-~~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~~i---L---~~rGIlviP 552 (636)
.+..++ ++++ +.++|+++=|. .+..+.+.+...++.|..++||=-=..+..||+++ . +++|+.+..
T Consensus 61 ~~~~~d~~~ll~~~~iDaV~I~t-P~~~H~~~~~~al~aGkhVl~EKPla~t~~ea~~l~~~~~~~~~~g~~~~v 134 (390)
T 4h3v_A 61 STTETDWRTLLERDDVQLVDVCT-PGDSHAEIAIAALEAGKHVLCEKPLANTVAEAEAMAAAAAKAAAGGIRSMV 134 (390)
T ss_dssp SEEESCHHHHTTCTTCSEEEECS-CGGGHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred CcccCCHHHHhcCCCCCEEEEeC-ChHHHHHHHHHHHHcCCCceeecCcccchhHHHHHHHHHHHHHhcCCceEE
Confidence 222222 4455 34688887765 56668888877778888999986322233466665 3 236765543
No 182
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=94.00 E-value=0.083 Score=54.69 Aligned_cols=112 Identities=13% Similarity=0.074 Sum_probs=70.2
Q ss_pred cEEEEecCccHHH-HHHHHHHHC-CCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeC-CCC
Q 006671 417 LRCVVSGSGKIAM-HVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD-EAK 493 (636)
Q Consensus 417 krVaIqGfGNVG~-~aAe~L~e~-GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~-~~e 493 (636)
.||.|+|+|++|. ..+..|.+. +++|++|+|.+ ..+++ .+... .++....+ -++
T Consensus 3 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~---------~~~~~---a~~~~-----------~~~~~~~~~~~~ 59 (349)
T 3i23_A 3 VKMGFIGFGKSANRYHLPYVMIRETLEVKTIFDLH---------VNEKA---AAPFK-----------EKGVNFTADLNE 59 (349)
T ss_dssp EEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECTT---------CCHHH---HHHHH-----------TTTCEEESCTHH
T ss_pred eEEEEEccCHHHHHHHHHHHhhCCCeEEEEEECCC---------HHHHH---HHhhC-----------CCCCeEECCHHH
Confidence 5899999999998 566666554 89999999984 11221 11000 02333332 244
Q ss_pred ccc-cccceEecCCCcCccchhhHHHhhhcCceEEEeCCCCCCCHHHHH---HHHHCCceEec
Q 006671 494 PWN-ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVD---VLKKANVLIAP 552 (636)
Q Consensus 494 il~-~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~~---iL~~rGIlviP 552 (636)
++. .++|+++=|.. +..+.+.+...++.|..+++|=-=.....++++ ..+++|+.+..
T Consensus 60 ll~~~~~D~V~i~tp-~~~h~~~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~g~~~~v 121 (349)
T 3i23_A 60 LLTDPEIELITICTP-AHTHYDLAKQAILAGKSVIVEKPFCDTLEHAEELFALGQEKGVVVMP 121 (349)
T ss_dssp HHSCTTCCEEEECSC-GGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHTTCCEEE
T ss_pred HhcCCCCCEEEEeCC-cHHHHHHHHHHHHcCCEEEEECCCcCCHHHHHHHHHHHHHcCCeEEE
Confidence 554 46899998774 466888888888899999997421112234443 34577876653
No 183
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=93.88 E-value=0.076 Score=55.83 Aligned_cols=107 Identities=17% Similarity=0.224 Sum_probs=70.3
Q ss_pred cEEEEecCc-cHHHHHHHHHHHC-CCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceee-CCCC
Q 006671 417 LRCVVSGSG-KIAMHVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYY-DEAK 493 (636)
Q Consensus 417 krVaIqGfG-NVG~~aAe~L~e~-GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i-~~~e 493 (636)
.||.|+|+| ++|...+..|.+. ++++++|+|. |.+++..+. +. | +.... +-++
T Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~l~av~d~----------~~~~~~~~a---~~------~-----g~~~~~~~~e 58 (387)
T 3moi_A 3 IRFGICGLGFAGSVLMAPAMRHHPDAQIVAACDP----------NEDVRERFG---KE------Y-----GIPVFATLAE 58 (387)
T ss_dssp EEEEEECCSHHHHTTHHHHHHHCTTEEEEEEECS----------CHHHHHHHH---HH------H-----TCCEESSHHH
T ss_pred eEEEEEeCCHHHHHHHHHHHHhCCCeEEEEEEeC----------CHHHHHHHH---HH------c-----CCCeECCHHH
Confidence 589999999 8998888888774 7899999997 333332121 11 1 12222 2244
Q ss_pred ccc-cccceEecCCCcCccchhhHHHhhhcCceEEEeCCCCCC--C-HHHHH---HHHHCCceEe
Q 006671 494 PWN-ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPC--T-PEAVD---VLKKANVLIA 551 (636)
Q Consensus 494 il~-~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgAN~P~--T-~eA~~---iL~~rGIlvi 551 (636)
++. .++|+++-|.. +..+.+.+...++.|..+++|= |+ | .++.+ ..+++|+.+.
T Consensus 59 ll~~~~vD~V~i~tp-~~~H~~~~~~al~aGk~Vl~EK---P~a~~~~e~~~l~~~a~~~g~~~~ 119 (387)
T 3moi_A 59 MMQHVQMDAVYIASP-HQFHCEHVVQASEQGLHIIVEK---PLTLSRDEADRMIEAVERAGVHLV 119 (387)
T ss_dssp HHHHSCCSEEEECSC-GGGHHHHHHHHHHTTCEEEECS---CCCSCHHHHHHHHHHHHHHTCCEE
T ss_pred HHcCCCCCEEEEcCC-cHHHHHHHHHHHHCCCceeeeC---CccCCHHHHHHHHHHHHHhCCeEE
Confidence 554 47999997765 5667888888888899999984 42 3 33443 3456777654
No 184
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=93.81 E-value=0.25 Score=53.17 Aligned_cols=106 Identities=17% Similarity=0.161 Sum_probs=64.2
Q ss_pred CCCCCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeC
Q 006671 411 NKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD 490 (636)
Q Consensus 411 g~~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~ 490 (636)
+.++.|+|+.|.|+|++|+.+|+.|...|.+|++ .|.+... +.| +++..+
T Consensus 140 ~~el~gktlGiIGlG~IG~~vA~~l~~~G~~V~~-~d~~~~~--~~~---------------------------~~~~~~ 189 (404)
T 1sc6_A 140 SFEARGKKLGIIGYGHIGTQLGILAESLGMYVYF-YDIENKL--PLG---------------------------NATQVQ 189 (404)
T ss_dssp CCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEE-ECSSCCC--CCT---------------------------TCEECS
T ss_pred ccccCCCEEEEEeECHHHHHHHHHHHHCCCEEEE-EcCCchh--ccC---------------------------CceecC
Confidence 4579999999999999999999999999999754 3432110 000 111111
Q ss_pred -CCCccccccceEecCCC-----cCccchhhHHHhhhcCceEEEeCCCCC-CCHHH-HHHHHHCCce
Q 006671 491 -EAKPWNERCDVAFPCAS-----QNEIDQSDAINLVNSGCRILVEGSNMP-CTPEA-VDVLKKANVL 549 (636)
Q Consensus 491 -~~eil~~~cDIliPcA~-----~n~It~enA~~l~~~~akiVvEgAN~P-~T~eA-~~iL~~rGIl 549 (636)
-++++ ..||+++-|.. .+.|+.+....+ +.++ +++.-|-++ +..+| .+.|++..|.
T Consensus 190 ~l~ell-~~aDvV~l~~P~t~~t~~li~~~~l~~m-k~ga-~lIN~aRg~~vd~~aL~~aL~~g~i~ 253 (404)
T 1sc6_A 190 HLSDLL-NMSDVVSLHVPENPSTKNMMGAKEISLM-KPGS-LLINASRGTVVDIPALADALASKHLA 253 (404)
T ss_dssp CHHHHH-HHCSEEEECCCSSTTTTTCBCHHHHHHS-CTTE-EEEECSCSSSBCHHHHHHHHHTTSEE
T ss_pred CHHHHH-hcCCEEEEccCCChHHHHHhhHHHHhhc-CCCe-EEEECCCChHHhHHHHHHHHHcCCcc
Confidence 11222 36888877654 456666555544 3344 445556655 45444 4667666553
No 185
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=93.80 E-value=0.076 Score=55.30 Aligned_cols=112 Identities=21% Similarity=0.245 Sum_probs=70.2
Q ss_pred CCCCcEEEEecCccHHHHHHHHHH-H-CCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeC
Q 006671 413 ELKGLRCVVSGSGKIAMHVLEKLI-A-YGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD 490 (636)
Q Consensus 413 ~l~GkrVaIqGfGNVG~~aAe~L~-e-~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~ 490 (636)
+++-.||.|+|+|++|...++.|. + .++.+++|+|. +++ .+..+ .+..+- .....+
T Consensus 20 ~m~~~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d~-----~~~-----~~~~~---a~~~g~---------~~~~~~ 77 (357)
T 3ec7_A 20 QGMTLKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCDI-----VAG-----RAQAA---LDKYAI---------EAKDYN 77 (357)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHTCTTEEEEEEECS-----STT-----HHHHH---HHHHTC---------CCEEES
T ss_pred CCCeeeEEEECCcHHHHHHHHHHHhhCCCcEEEEEEeC-----CHH-----HHHHH---HHHhCC---------CCeeeC
Confidence 345579999999999999898888 4 48999999997 332 22111 111110 122222
Q ss_pred -CCCccc-cccceEecCCCcCccchhhHHHhhhcCceEEEeCCCCCC--C-HHHHHHH---HHCCceE
Q 006671 491 -EAKPWN-ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPC--T-PEAVDVL---KKANVLI 550 (636)
Q Consensus 491 -~~eil~-~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgAN~P~--T-~eA~~iL---~~rGIlv 550 (636)
.++++. .++|+++-|. .+..+.+.+...++.|..++||= |+ | .++++++ +++|+.+
T Consensus 78 ~~~~ll~~~~~D~V~i~t-p~~~h~~~~~~al~aGk~Vl~EK---Pla~~~~e~~~l~~~a~~~g~~~ 141 (357)
T 3ec7_A 78 DYHDLINDKDVEVVIITA-SNEAHADVAVAALNANKYVFCEK---PLAVTAADCQRVIEAEQKNGKRM 141 (357)
T ss_dssp SHHHHHHCTTCCEEEECS-CGGGHHHHHHHHHHTTCEEEEES---SSCSSHHHHHHHHHHHHHHTSCC
T ss_pred CHHHHhcCCCCCEEEEcC-CcHHHHHHHHHHHHCCCCEEeec---CccCCHHHHHHHHHHHHHhCCeE
Confidence 234443 4689998766 55667788888888899999985 42 3 3444433 5667643
No 186
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=93.78 E-value=0.066 Score=56.14 Aligned_cols=108 Identities=17% Similarity=0.202 Sum_probs=65.9
Q ss_pred CCCCCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeC
Q 006671 411 NKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD 490 (636)
Q Consensus 411 g~~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~ 490 (636)
+.++.|+|+-|.|+|++|+.+|+.+...|.+|++. |. ..- +.. . + .+.++.+
T Consensus 136 ~~~l~g~tvGIiG~G~IG~~va~~~~~fg~~v~~~-d~-------~~~--~~~---~---~------------~~~~~~~ 187 (334)
T 3kb6_A 136 ARELNRLTLGVIGTGRIGSRVAMYGLAFGMKVLCY-DV-------VKR--EDL---K---E------------KGCVYTS 187 (334)
T ss_dssp BCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEE-CS-------SCC--HHH---H---H------------TTCEECC
T ss_pred cceecCcEEEEECcchHHHHHHHhhcccCceeeec-CC-------ccc--hhh---h---h------------cCceecC
Confidence 45789999999999999999999999999998754 32 211 110 0 0 0122222
Q ss_pred CCCccccccceEecCCC-----cCccchhhHHHhhhcCceEEEeCCCCC-CCHHH-HHHHHHCCce
Q 006671 491 EAKPWNERCDVAFPCAS-----QNEIDQSDAINLVNSGCRILVEGSNMP-CTPEA-VDVLKKANVL 549 (636)
Q Consensus 491 ~~eil~~~cDIliPcA~-----~n~It~enA~~l~~~~akiVvEgAN~P-~T~eA-~~iL~~rGIl 549 (636)
-++++ ..|||++-+.. .+.|+.+.-.++ +.+|- ++--|=++ +..+| .+.|++.-|.
T Consensus 188 l~ell-~~sDivslh~Plt~~T~~li~~~~l~~m-k~~a~-lIN~aRG~iVde~aL~~aL~~g~i~ 250 (334)
T 3kb6_A 188 LDELL-KESDVISLHVPYTKETHHMINEERISLM-KDGVY-LINTARGKVVDTDALYRAYQRGKFS 250 (334)
T ss_dssp HHHHH-HHCSEEEECCCCCTTTTTCBCHHHHHHS-CTTEE-EEECSCGGGBCHHHHHHHHHTTCEE
T ss_pred HHHHH-hhCCEEEEcCCCChhhccCcCHHHHhhc-CCCeE-EEecCccccccHHHHHHHHHhCCce
Confidence 22333 36788866543 466777766655 33444 44566666 45444 4566655443
No 187
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=93.76 E-value=0.042 Score=54.48 Aligned_cols=109 Identities=11% Similarity=0.094 Sum_probs=68.0
Q ss_pred CCCHHHHHHH--HHHHHHHHHhhcCCCCcccCCCCCCChhHHHHHHHHhhhhhCCCCccccCcccccCCCCCCCCcchhH
Q 006671 321 GKSDNEIMRF--CQSFMNEIHRYLGPDKDLPSEEMGVGTREMGYLFGQYRRLAGHFQGSFTGPRIFWSGSSLRTEATGYG 398 (636)
Q Consensus 321 ~~S~~El~r~--~r~f~~eL~~~IGp~~DVpA~DiGt~~rem~~m~~~y~~l~g~~~g~vTGKp~~~GGs~~r~eATG~G 398 (636)
..++.-+.|+ +-+|..+|.+- +. --++..|++-..+-.+..-. |-++.=|..|+. --||-
T Consensus 6 ~ip~~ti~RL~~Y~r~l~~l~~~---g~------~~isS~ela~~~gv~~~qiR--------kDls~fg~~G~~-g~GY~ 67 (212)
T 3keo_A 6 SIPKATAKRLSLYYRIFKRFNTD---GI------EKASSKQIADALGIDSATVR--------RDFSYFGELGRR-GFGYD 67 (212)
T ss_dssp CCCHHHHTTHHHHHHHHHHHHHT---TC------CEECHHHHHHHHTSCHHHHH--------HHHHTTGGGTTT-SSSEE
T ss_pred cCCHHHHHHHHHHHHHHHHHHHC---CC------eEECHHHHHHHHCCCHHHHH--------HHHHHHhhcCCC-CCCEE
Confidence 3566777775 56677777631 11 12577888776643221110 111222233322 34777
Q ss_pred HHHHHHHHHHHhCCCCCCcEEEEecCccHHHHHHHHH--HHCCCEEEEEeCC
Q 006671 399 LVFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKL--IAYGAIPVSVSDA 448 (636)
Q Consensus 399 V~~~~~~~l~~~g~~l~GkrVaIqGfGNVG~~aAe~L--~e~GAkVVaVSDs 448 (636)
|-+..++.-+.+|.+ +..+|+|.|.||.|..+++.+ .+.|.++|++.|.
T Consensus 68 V~~L~~~i~~~Lg~~-~~~~V~IvGaG~lG~aLa~~~~~~~~g~~iVg~~D~ 118 (212)
T 3keo_A 68 VKKLMNFFAEILNDH-STTNVMLVGCGNIGRALLHYRFHDRNKMQISMAFDL 118 (212)
T ss_dssp HHHHHHHHHHHTTTT-SCEEEEEECCSHHHHHHTTCCCCTTSSEEEEEEEEC
T ss_pred HHHHHHHHHHHhCCC-CCCEEEEECcCHHHHHHHHhhhcccCCeEEEEEEeC
Confidence 776666666667755 457999999999999999873 4578999999997
No 188
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=93.74 E-value=0.23 Score=49.52 Aligned_cols=112 Identities=11% Similarity=-0.044 Sum_probs=64.7
Q ss_pred CcEEEEecCccHHHHHHHHHHHC--CCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceee-CCC
Q 006671 416 GLRCVVSGSGKIAMHVLEKLIAY--GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYY-DEA 492 (636)
Q Consensus 416 GkrVaIqGfGNVG~~aAe~L~e~--GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i-~~~ 492 (636)
-++|.|.|+|++|..+|..|.+. |.. |.+.|. +.+.+..+. + .+... ... +.+
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~g~~~~-V~~~d~----------~~~~~~~~~---~-~g~~~---------~~~~~~~ 61 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRDHPHYK-IVGYNR----------SDRSRDIAL---E-RGIVD---------EATADFK 61 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSE-EEEECS----------SHHHHHHHH---H-TTSCS---------EEESCTT
T ss_pred cceEEEEeeCHHHHHHHHHHHhCCCCcE-EEEEcC----------CHHHHHHHH---H-cCCcc---------cccCCHH
Confidence 36899999999999999999987 566 455564 233332221 1 11110 111 223
Q ss_pred CccccccceEecCCCcCccchhhHHHhhhc---CceEEEeCCCCCC--CHHHHHHHHHCCceEecc
Q 006671 493 KPWNERCDVAFPCASQNEIDQSDAINLVNS---GCRILVEGSNMPC--TPEAVDVLKKANVLIAPA 553 (636)
Q Consensus 493 eil~~~cDIliPcA~~n~It~enA~~l~~~---~akiVvEgAN~P~--T~eA~~iL~~rGIlviPD 553 (636)
+.+ .+||++|-|.....+ .+-+..+... .-.+|+..+|.+. +....+.|.++++.++|.
T Consensus 62 ~~~-~~aDvVilavp~~~~-~~v~~~l~~~~l~~~~ivi~~~~~~~~~~~~l~~~l~~~~~~~v~~ 125 (290)
T 3b1f_A 62 VFA-ALADVIILAVPIKKT-IDFIKILADLDLKEDVIITDAGSTKYEIVRAAEYYLKDKPVQFVGS 125 (290)
T ss_dssp TTG-GGCSEEEECSCHHHH-HHHHHHHHTSCCCTTCEEECCCSCHHHHHHHHHHHHTTSSCEEEEE
T ss_pred Hhh-cCCCEEEEcCCHHHH-HHHHHHHHhcCCCCCCEEEECCCCchHHHHHHHHhccccCCEEEEe
Confidence 333 389999999987665 4444444321 2346666666542 223334444447778774
No 189
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=93.73 E-value=0.35 Score=50.39 Aligned_cols=118 Identities=14% Similarity=0.102 Sum_probs=70.1
Q ss_pred CCCCC--cEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceee
Q 006671 412 KELKG--LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYY 489 (636)
Q Consensus 412 ~~l~G--krVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i 489 (636)
.+++| +||+|.|.|.||+.+|+.|.+. .. |.+.|. +.+.++.+ ++. .... ... +
T Consensus 10 ~~~~g~~mkilvlGaG~vG~~~~~~L~~~-~~-v~~~~~----------~~~~~~~~---~~~---~~~~-----~~d-~ 65 (365)
T 3abi_A 10 HHIEGRHMKVLILGAGNIGRAIAWDLKDE-FD-VYIGDV----------NNENLEKV---KEF---ATPL-----KVD-A 65 (365)
T ss_dssp ------CCEEEEECCSHHHHHHHHHHTTT-SE-EEEEES----------CHHHHHHH---TTT---SEEE-----ECC-T
T ss_pred ccccCCccEEEEECCCHHHHHHHHHHhcC-CC-eEEEEc----------CHHHHHHH---hcc---CCcE-----EEe-c
Confidence 45666 4799999999999999999764 45 456664 33443222 111 1110 000 1
Q ss_pred CC-CCcc--ccccceEecCCCcCccchhhHHHhhhcCceEEEeCCCCCCCHHHHHHHHHCCceEeccc
Q 006671 490 DE-AKPW--NERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANVLIAPAM 554 (636)
Q Consensus 490 ~~-~eil--~~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~~iL~~rGIlviPD~ 554 (636)
++ +.+- -.++||+|=|+... .+..-++..++.++.+|==.-..+.+.+-++..+++|+.++|+.
T Consensus 66 ~d~~~l~~~~~~~DvVi~~~p~~-~~~~v~~~~~~~g~~yvD~s~~~~~~~~l~~~a~~~g~~~i~~~ 132 (365)
T 3abi_A 66 SNFDKLVEVMKEFELVIGALPGF-LGFKSIKAAIKSKVDMVDVSFMPENPLELRDEAEKAQVTIVFDA 132 (365)
T ss_dssp TCHHHHHHHHTTCSEEEECCCGG-GHHHHHHHHHHHTCEEEECCCCSSCGGGGHHHHHHTTCEEECCC
T ss_pred CCHHHHHHHHhCCCEEEEecCCc-ccchHHHHHHhcCcceEeeeccchhhhhhhhhhccCCceeeecC
Confidence 11 1111 23789999887654 56777777788899987522223344556677889999999865
No 190
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=93.72 E-value=0.089 Score=55.22 Aligned_cols=100 Identities=13% Similarity=0.149 Sum_probs=61.6
Q ss_pred cEEEEecCccHHHHHHHHHHHC-CCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccC-------Ccee
Q 006671 417 LRCVVSGSGKIAMHVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYA-------RSKY 488 (636)
Q Consensus 417 krVaIqGfGNVG~~aAe~L~e~-GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p-------~a~~ 488 (636)
.||+|.|+|.+|+.+++.|.+. +..+++|+|. +++.. .. +.. ..+ +.-|..+.| +.+.
T Consensus 2 ikVgIiGaG~iG~~~~r~L~~~p~~elvav~d~-----~~~~~--~~---~a~---~~g-~~~~~~~~~~~~~~~~~v~v 67 (340)
T 1b7g_O 2 VNVAVNGYGTIGKRVADAIIKQPDMKLVGVAKT-----SPNYE--AF---IAH---RRG-IRIYVPQQSIKKFEESGIPV 67 (340)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCTTEEEEEEECS-----SCSHH--HH---HHH---HTT-CCEECCGGGHHHHHTTTCCC
T ss_pred eEEEEEecCHHHHHHHHHHHcCCCCEEEEEEcC-----ChHHH--HH---HHH---hcC-cceecCcCHHHHhccccccc
Confidence 4899999999999999999875 6899999995 22110 11 111 101 111100000 0000
Q ss_pred eCC-CCccccccceEecCCCcCccchhhHHHhhhcCceEEEeCCC
Q 006671 489 YDE-AKPWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSN 532 (636)
Q Consensus 489 i~~-~eil~~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgAN 532 (636)
.+. ++++ .++|+++-|+ ....+.+.++...+.++++|.-+++
T Consensus 68 ~~~~e~l~-~~vDvV~~aT-p~~~s~~~a~~~~~aG~kvV~~sa~ 110 (340)
T 1b7g_O 68 AGTVEDLI-KTSDIVVDTT-PNGVGAQYKPIYLQLQRNAIFQGGE 110 (340)
T ss_dssp CCCHHHHH-HHCSEEEECC-STTHHHHHHHHHHHTTCEEEECTTS
T ss_pred ccCHhHhh-cCCCEEEECC-CCchhHHHHHHHHHcCCeEEEeCCC
Confidence 000 0111 2799999985 5666788888888889999999888
No 191
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=93.64 E-value=0.16 Score=52.52 Aligned_cols=110 Identities=13% Similarity=0.108 Sum_probs=72.5
Q ss_pred CCcEEEEecCc-cHHHHHHHHHHHC--CCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeCC
Q 006671 415 KGLRCVVSGSG-KIAMHVLEKLIAY--GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE 491 (636)
Q Consensus 415 ~GkrVaIqGfG-NVG~~aAe~L~e~--GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~~ 491 (636)
+-.||.|+|+| .+|...+..|.+. ++++++|+|. |.+.+..+ .+. |+.....++
T Consensus 17 ~~irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d~----------~~~~~~~~---a~~----------~~~~~~~~~ 73 (340)
T 1zh8_A 17 RKIRLGIVGCGIAARELHLPALKNLSHLFEITAVTSR----------TRSHAEEF---AKM----------VGNPAVFDS 73 (340)
T ss_dssp CCEEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECS----------SHHHHHHH---HHH----------HSSCEEESC
T ss_pred CceeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEcC----------CHHHHHHH---HHH----------hCCCcccCC
Confidence 44799999999 7998888888775 6899999997 33443222 111 111122222
Q ss_pred -CCccc-cccceEecCCCcCccchhhHHHhhhcCceEEEeCCCCCC--C-HHHHHHH---HHCCceEe
Q 006671 492 -AKPWN-ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPC--T-PEAVDVL---KKANVLIA 551 (636)
Q Consensus 492 -~eil~-~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgAN~P~--T-~eA~~iL---~~rGIlvi 551 (636)
++++. .++|+++-|.. +..+.+.+...++.|..+++|= |+ | .|+.+++ +++|+.+.
T Consensus 74 ~~~ll~~~~vD~V~i~tp-~~~H~~~~~~al~aGkhVl~EK---Pla~~~~ea~~l~~~a~~~g~~~~ 137 (340)
T 1zh8_A 74 YEELLESGLVDAVDLTLP-VELNLPFIEKALRKGVHVICEK---PISTDVETGKKVVELSEKSEKTVY 137 (340)
T ss_dssp HHHHHHSSCCSEEEECCC-GGGHHHHHHHHHHTTCEEEEES---SSSSSHHHHHHHHHHHHHCSSCEE
T ss_pred HHHHhcCCCCCEEEEeCC-chHHHHHHHHHHHCCCcEEEeC---CCCCCHHHHHHHHHHHHHcCCeEE
Confidence 34553 47999998774 5667888888888899999994 42 3 3444443 56777654
No 192
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=93.62 E-value=0.17 Score=53.30 Aligned_cols=116 Identities=12% Similarity=0.150 Sum_probs=72.9
Q ss_pred CCCcEEEEecCccHHHHHHHHHHH-CCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCC--ceeeC
Q 006671 414 LKGLRCVVSGSGKIAMHVLEKLIA-YGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYAR--SKYYD 490 (636)
Q Consensus 414 l~GkrVaIqGfGNVG~~aAe~L~e-~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~--a~~i~ 490 (636)
...+++.|.|.|.+|...++.|.. .+.+-|.|.|. +.++...+.+.... +++ ....+
T Consensus 127 ~~~~~v~iIGaG~~a~~~a~al~~~~~~~~V~V~~r----------~~~~a~~la~~~~~----------~~g~~~~~~~ 186 (350)
T 1x7d_A 127 PNARKMALIGNGAQSEFQALAFHKHLGIEEIVAYDT----------DPLATAKLIANLKE----------YSGLTIRRAS 186 (350)
T ss_dssp TTCCEEEEECCSTTHHHHHHHHHHHSCCCEEEEECS----------SHHHHHHHHHHHTT----------CTTCEEEECS
T ss_pred ccCCeEEEECCcHHHHHHHHHHHHhCCCcEEEEEcC----------CHHHHHHHHHHHHh----------ccCceEEEeC
Confidence 467899999999999998887754 56666788876 34444333221111 012 11111
Q ss_pred C-CCccccccceEecCCCcC----ccchhhHHHhhhcCceEEEeCCCCCCCHHHHHHHHHCCceEecccc
Q 006671 491 E-AKPWNERCDVAFPCASQN----EIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANVLIAPAMA 555 (636)
Q Consensus 491 ~-~eil~~~cDIliPcA~~n----~It~enA~~l~~~~akiVvEgAN~P~T~eA~~iL~~rGIlviPD~~ 555 (636)
. ++.+ .+|||++-|.... .+..+ .++.++.+++.|+..|-..|.+..+..++..|+ |..
T Consensus 187 ~~~eav-~~aDiVi~aTps~~~~pvl~~~----~l~~G~~V~~vgs~~p~~~El~~~~~~~a~v~v-D~~ 250 (350)
T 1x7d_A 187 SVAEAV-KGVDIITTVTADKAYATIITPD----MLEPGMHLNAVGGDCPGKTELHADVLRNARVFV-EYE 250 (350)
T ss_dssp SHHHHH-TTCSEEEECCCCSSEEEEECGG----GCCTTCEEEECSCCBTTBEEECHHHHHTSEEEE-SSH
T ss_pred CHHHHH-hcCCEEEEeccCCCCCceecHH----HcCCCCEEEECCCCCCCceeeCHHHHhcCcEEE-CCH
Confidence 1 1222 3699999988754 23332 234589999999999877776666667777555 443
No 193
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=93.60 E-value=0.044 Score=56.87 Aligned_cols=93 Identities=15% Similarity=0.137 Sum_probs=62.8
Q ss_pred CcEEEEecCccHHHHHHHHHHH--CCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeC-CC
Q 006671 416 GLRCVVSGSGKIAMHVLEKLIA--YGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD-EA 492 (636)
Q Consensus 416 GkrVaIqGfGNVG~~aAe~L~e--~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~-~~ 492 (636)
-.+|+|.|+|+||+..++.|.+ .+.++++|+|. +++- . .. +..+..+ +. .+.+ .+
T Consensus 4 ~irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~-----~~~~---~-~~---~~a~~~g-~~---------~~~~~~e 61 (312)
T 1nvm_B 4 KLKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGI-----DAAS---D-GL---ARAQRMG-VT---------TTYAGVE 61 (312)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECS-----CTTC---H-HH---HHHHHTT-CC---------EESSHHH
T ss_pred CCEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeC-----Chhh---h-HH---HHHHHcC-CC---------cccCCHH
Confidence 3689999999999999999965 57899999997 4331 0 00 1111111 00 0011 12
Q ss_pred Cccc----cccceEecCCCcCccchhhHHHhhhc--CceEEEeCC
Q 006671 493 KPWN----ERCDVAFPCASQNEIDQSDAINLVNS--GCRILVEGS 531 (636)
Q Consensus 493 eil~----~~cDIliPcA~~n~It~enA~~l~~~--~akiVvEgA 531 (636)
++++ .++|+++-|+. +..+.+.+...++. |+.+|+|-.
T Consensus 62 ~ll~~~~~~~iDvV~~atp-~~~h~~~a~~al~a~~Gk~Vi~ekp 105 (312)
T 1nvm_B 62 GLIKLPEFADIDFVFDATS-ASAHVQNEALLRQAKPGIRLIDLTP 105 (312)
T ss_dssp HHHHSGGGGGEEEEEECSC-HHHHHHHHHHHHHHCTTCEEEECST
T ss_pred HHHhccCCCCCcEEEECCC-hHHHHHHHHHHHHhCCCCEEEEcCc
Confidence 3333 36899999987 77888999888888 999999764
No 194
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=93.53 E-value=0.22 Score=52.62 Aligned_cols=116 Identities=15% Similarity=0.077 Sum_probs=70.2
Q ss_pred CCCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeC--
Q 006671 413 ELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD-- 490 (636)
Q Consensus 413 ~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~-- 490 (636)
+-.+++|.|.|.|++|+.+|+.|.+. .. |+|+|. +.+++..+ ... .. ...++
T Consensus 13 ~~~~~~v~IiGaG~iG~~ia~~L~~~-~~-V~V~~R----------~~~~a~~l---a~~-~~----------~~~~d~~ 66 (365)
T 2z2v_A 13 EGRHMKVLILGAGNIGRAIAWDLKDE-FD-VYIGDV----------NNENLEKV---KEF-AT----------PLKVDAS 66 (365)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHTTT-SE-EEEEES----------CHHHHHHH---TTT-SE----------EEECCTT
T ss_pred cCCCCeEEEEcCCHHHHHHHHHHHcC-Ce-EEEEEC----------CHHHHHHH---Hhh-CC----------eEEEecC
Confidence 34568999999999999999999888 65 678886 34443222 111 00 00011
Q ss_pred C-CCc--cccccceEecCCCcCccchhhHHHhhhcCceEEEeCCCCCCCHHHHHHHHHCCceEecccc
Q 006671 491 E-AKP--WNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANVLIAPAMA 555 (636)
Q Consensus 491 ~-~ei--l~~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~~iL~~rGIlviPD~~ 555 (636)
+ +++ +-.+||++|=|... ..+..-+...++.++.+|--.-+.+-+.+-.+..+++|+.++|..=
T Consensus 67 ~~~~l~~ll~~~DvVIn~~P~-~~~~~v~~a~l~~G~~~vD~s~~~~~~~~l~~~Ak~aG~~~l~g~G 133 (365)
T 2z2v_A 67 NFDKLVEVMKEFELVIGALPG-FLGFKSIKAAIKSKVDMVDVSFMPENPLELRDEAEKAQVTIVFDAG 133 (365)
T ss_dssp CHHHHHHHHTTCSCEEECCCH-HHHHHHHHHHHHTTCCEEECCCCSSCGGGGHHHHHHTTCEEECSCB
T ss_pred CHHHHHHHHhCCCEEEECCCh-hhhHHHHHHHHHhCCeEEEccCCcHHHHHHHHHHHHcCCEEEECCC
Confidence 1 111 11279999998543 3444445555667888775333333444557788999999987653
No 195
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=93.51 E-value=0.079 Score=57.94 Aligned_cols=129 Identities=12% Similarity=0.149 Sum_probs=77.4
Q ss_pred CCcEEEEecCccHHHHHHHHHHH-CCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHH-hhcCCcc------cccc--ccC
Q 006671 415 KGLRCVVSGSGKIAMHVLEKLIA-YGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIK-SQQRSLR------DYSK--TYA 484 (636)
Q Consensus 415 ~GkrVaIqGfGNVG~~aAe~L~e-~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k-~~~g~l~------~y~~--~~p 484 (636)
+-.||.|+|+|.+|+..++.+.+ .+.+|++|+|. ++ +......+.. .....+. +..+ ..+
T Consensus 22 k~IRVGIIGaG~iG~~~~~~l~~~~~veLvAV~D~-----~~-----era~~~a~~~yG~~~~~~~~~~~~~i~~a~~~g 91 (446)
T 3upl_A 22 KPIRIGLIGAGEMGTDIVTQVARMQGIEVGALSAR-----RL-----PNTFKAIRTAYGDEENAREATTESAMTRAIEAG 91 (446)
T ss_dssp CCEEEEEECCSHHHHHHHHHHTTSSSEEEEEEECS-----ST-----HHHHHHHHHHHSSSTTEEECSSHHHHHHHHHTT
T ss_pred CceEEEEECChHHHHHHHHHHhhCCCcEEEEEEeC-----CH-----HHHHHHHHHhcCCccccccccchhhhhhhhccC
Confidence 44799999999999998887765 48899999997 33 3322121100 0000000 0000 001
Q ss_pred CceeeCC-CCccc-cccceEecCCCcCccchhhHHHhhhcCceEEEeCCCCCCCHH-H---HHHHHHCCceEecccc
Q 006671 485 RSKYYDE-AKPWN-ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPE-A---VDVLKKANVLIAPAMA 555 (636)
Q Consensus 485 ~a~~i~~-~eil~-~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~e-A---~~iL~~rGIlviPD~~ 555 (636)
.....++ ++++. .++|+++-|+.....+.+.+..-++.|..+|++ |-+++.+ + .+.-+++|+.+.+..-
T Consensus 92 ~~~v~~D~eeLL~d~dIDaVviaTp~p~~H~e~a~~AL~AGKHVv~~--nk~l~~~eg~eL~~~A~e~Gvvl~~~~g 166 (446)
T 3upl_A 92 KIAVTDDNDLILSNPLIDVIIDATGIPEVGAETGIAAIRNGKHLVMM--NVEADVTIGPYLKAQADKQGVIYSLGAG 166 (446)
T ss_dssp CEEEESCHHHHHTCTTCCEEEECSCCHHHHHHHHHHHHHTTCEEEEC--CHHHHHHHHHHHHHHHHHHTCCEEECTT
T ss_pred CceEECCHHHHhcCCCCCEEEEcCCChHHHHHHHHHHHHcCCcEEec--CcccCHHHHHHHHHHHHHhCCeeeecCC
Confidence 1222333 34554 479999999876556677777777889999985 5454432 2 2344678998876553
No 196
>3pym_A GAPDH 3, glyceraldehyde-3-phosphate dehydrogenase 3; NAD(P)-binding rossmann-fold domain, alpha and beta protein, oxidoreductase; HET: NAD; 2.00A {Saccharomyces cerevisiae} PDB: 2i5p_O*
Probab=93.50 E-value=0.33 Score=51.26 Aligned_cols=102 Identities=16% Similarity=0.261 Sum_probs=67.0
Q ss_pred cEEEEecCccHHHHHHHHHHHC-CCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccc------cCC--ce
Q 006671 417 LRCVVSGSGKIAMHVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKT------YAR--SK 487 (636)
Q Consensus 417 krVaIqGfGNVG~~aAe~L~e~-GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~------~p~--a~ 487 (636)
.||.|-|||-+|+.+.+.+.+. ...||+|.|.. +|.+.+..|+++-...|++..-++. +.+ .+
T Consensus 2 ~kv~INGfGrIGr~v~R~~~~~~~~~ivaiNd~~--------~d~~~~a~l~kyDS~hG~f~~~v~~~~~~l~i~Gk~I~ 73 (332)
T 3pym_A 2 VRVAINGFGRIGRLVMRIALSRPNVEVVALNDPF--------ITNDYAAYMFKYDSTHGRYAGEVSHDDKHIIVDGKKIA 73 (332)
T ss_dssp CEEEEECCSHHHHHHHHHHHHSTTCEEEEEECTT--------CCHHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEE
T ss_pred eEEEEECCCcHHHHHHHHHHhCCCcEEEEEeCCC--------CCHHHHHHHhcccCCCCCCCCcEEEcCCEEEECCEEEE
Confidence 3799999999999999988876 57899998852 3777766666554444443321110 111 11
Q ss_pred eeC---CCC-cc-ccccceEecCCCcCccchhhHHHhhhcCceEE
Q 006671 488 YYD---EAK-PW-NERCDVAFPCASQNEIDQSDAINLVNSGCRIL 527 (636)
Q Consensus 488 ~i~---~~e-il-~~~cDIliPcA~~n~It~enA~~l~~~~akiV 527 (636)
.+. +++ .| +..+|+++.|+ +.-.+.+-|..-++.|||-|
T Consensus 74 v~~e~dp~~i~w~~~gvDiVlesT-G~f~s~e~a~~hl~aGAkkV 117 (332)
T 3pym_A 74 TYQERDPANLPWGSSNVDIAIDST-GVFKELDTAQKHIDAGAKKV 117 (332)
T ss_dssp EECCSSGGGSCTTTTTCSEEEECS-SSSCSHHHHHHHHHTTCSEE
T ss_pred EEeecccccCCccccCccEEEEec-ccccCHHHHHHHHHcCCCEE
Confidence 111 112 36 46899999997 55568888888788888643
No 197
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=93.44 E-value=0.09 Score=57.55 Aligned_cols=125 Identities=14% Similarity=0.135 Sum_probs=68.3
Q ss_pred hCCCCCCcEEEEecCccHHHHHHHHHHHC-CCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCcee
Q 006671 410 MNKELKGLRCVVSGSGKIAMHVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKY 488 (636)
Q Consensus 410 ~g~~l~GkrVaIqGfGNVG~~aAe~L~e~-GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~ 488 (636)
.+.++++++|+|.|.|.+|+.+++.|.+. |.+ |.|.|. +.+++..+. ... .+... .. +
T Consensus 17 ~~~~l~~k~VlIiGAGgiG~aia~~L~~~~g~~-V~v~~R----------~~~ka~~la---~~~-~~~~~--~~-D--- 75 (467)
T 2axq_A 17 IEGRHMGKNVLLLGSGFVAQPVIDTLAANDDIN-VTVACR----------TLANAQALA---KPS-GSKAI--SL-D--- 75 (467)
T ss_dssp ------CEEEEEECCSTTHHHHHHHHHTSTTEE-EEEEES----------SHHHHHHHH---GGG-TCEEE--EC-C---
T ss_pred cccCCCCCEEEEECChHHHHHHHHHHHhCCCCe-EEEEEC----------CHHHHHHHH---Hhc-CCcEE--EE-e---
Confidence 45688999999999999999999999998 566 677776 233332222 111 11100 00 0
Q ss_pred eCC-CCcc--ccccceEecCCCcCccchhhHHHhhhcCceEEEeCCCCCCCHHHHHHHHHCCceEeccccc
Q 006671 489 YDE-AKPW--NERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANVLIAPAMAA 556 (636)
Q Consensus 489 i~~-~eil--~~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~~iL~~rGIlviPD~~a 556 (636)
+++ +++- -.++|++|-|+... .+..-+...++.++.++.-....|.+.+..+..+++|+.+++..-.
T Consensus 76 ~~d~~~l~~~l~~~DvVIn~tp~~-~~~~v~~a~l~~g~~vvd~~~~~p~~~~Ll~~Ak~aGv~~i~g~G~ 145 (467)
T 2axq_A 76 VTDDSALDKVLADNDVVISLIPYT-FHPNVVKSAIRTKTDVVTSSYISPALRELEPEIVKAGITVMNEIGL 145 (467)
T ss_dssp TTCHHHHHHHHHTSSEEEECSCGG-GHHHHHHHHHHHTCEEEECSCCCHHHHHHHHHHHHHTCEEECSCBB
T ss_pred cCCHHHHHHHHcCCCEEEECCchh-hhHHHHHHHHhcCCEEEEeecCCHHHHHHHHHHHHcCCEEEecCCc
Confidence 011 0111 12799999998643 2322233334456777754332343334445667889988877654
No 198
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=93.42 E-value=0.24 Score=52.29 Aligned_cols=99 Identities=15% Similarity=0.167 Sum_probs=64.4
Q ss_pred CCcEEEEec-CccHHHHHHHHHHHCC-CEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeCCC
Q 006671 415 KGLRCVVSG-SGKIAMHVLEKLIAYG-AIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEA 492 (636)
Q Consensus 415 ~GkrVaIqG-fGNVG~~aAe~L~e~G-AkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~~~ 492 (636)
+..+|+|.| +|.||+.+++.|.+.. ..+++|.|. .+.|..++.. .+.+.... .......+ +
T Consensus 15 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~-----~~~g~~~~~~---------~~~~~~~v--~~dl~~~~-~ 77 (359)
T 1xyg_A 15 KDIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTAD-----RKAGQSMESV---------FPHLRAQK--LPTLVSVK-D 77 (359)
T ss_dssp CCEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCS-----TTTTSCHHHH---------CGGGTTSC--CCCCBCGG-G
T ss_pred cCcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCc-----hhcCCCHHHh---------CchhcCcc--cccceecc-h
Confidence 447999999 9999999999998875 589999886 2445443321 11111100 00111112 4
Q ss_pred CccccccceEecCCCcCccchhhHHHhhhcCceEEEeCCCC
Q 006671 493 KPWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNM 533 (636)
Q Consensus 493 eil~~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgAN~ 533 (636)
++|. +||++|-|+ ....+.+.|..+ +.|+++|-=++..
T Consensus 78 ~~~~-~vDvVf~at-p~~~s~~~a~~~-~aG~~VId~sa~~ 115 (359)
T 1xyg_A 78 ADFS-TVDAVFCCL-PHGTTQEIIKEL-PTALKIVDLSADF 115 (359)
T ss_dssp CCGG-GCSEEEECC-CTTTHHHHHHTS-CTTCEEEECSSTT
T ss_pred hHhc-CCCEEEEcC-CchhHHHHHHHH-hCCCEEEECCccc
Confidence 4665 899999876 455678888888 8899988766643
No 199
>3lvf_P GAPDH 1, glyceraldehyde-3-phosphate dehydrogenase 1; oxidoreductase, glycolysis, rossmann fold; HET: NAD; 1.70A {Staphylococcus aureus} PDB: 3vaz_P* 3l6o_Q 3k73_Q 3lc2_O* 3lc7_O 3lc1_P* 3hq4_R* 3kv3_O* 3l4s_Q* 3k9q_Q* 3ksd_Q* 3ksz_O*
Probab=93.40 E-value=0.25 Score=52.26 Aligned_cols=101 Identities=20% Similarity=0.352 Sum_probs=66.3
Q ss_pred cEEEEecCccHHHHHHHHHHHC-CCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccc------cCC--ce
Q 006671 417 LRCVVSGSGKIAMHVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKT------YAR--SK 487 (636)
Q Consensus 417 krVaIqGfGNVG~~aAe~L~e~-GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~------~p~--a~ 487 (636)
.||.|-|||-+|+.+.+.+.+. ...||+|.|. .|.+.+..|+++-...|++..-++. +.+ .+
T Consensus 5 ~kv~INGfGrIGr~v~R~~~~~~~~~ivaind~---------~d~~~~a~l~kyDS~hG~f~~~v~~~~~~l~inGk~I~ 75 (338)
T 3lvf_P 5 VKVAINGFGRIGRLAFRRIQEVEGLEVVAVNDL---------TDDDMLAHLLKYDTMQGRFTGEVEVVDGGFRVNGKEVK 75 (338)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSTTEEEEEEECS---------SCHHHHHHHHHCCTTTCCCSSCEEEETTEEEETTEEEE
T ss_pred EEEEEECCCcHHHHHHHHHHHCCCceEEEEecC---------CCHHHHHHHhccCCCCCCcCCeEEEcCCEEEECCEEEE
Confidence 4899999999999999998876 4689999883 4666666666554444543321110 111 11
Q ss_pred eeC---CCC-cc-ccccceEecCCCcCccchhhHHHhhhcCceEE
Q 006671 488 YYD---EAK-PW-NERCDVAFPCASQNEIDQSDAINLVNSGCRIL 527 (636)
Q Consensus 488 ~i~---~~e-il-~~~cDIliPcA~~n~It~enA~~l~~~~akiV 527 (636)
.+. +++ .| +..+||++.|+ +.-.+.+-|+.-++.|||-|
T Consensus 76 v~~e~dp~~i~w~~~gvDiVlesT-G~f~s~e~a~~hl~aGAkkV 119 (338)
T 3lvf_P 76 SFSEPDASKLPWKDLNIDVVLECT-GFYTDKDKAQAHIEAGAKKV 119 (338)
T ss_dssp EECCSCGGGSCTTTTTCSEEEECS-SSCCBHHHHHHHHHTTCSEE
T ss_pred EEEecccccCCccccCCCEEEEcc-CCcCCHHHHHHHHHcCCCEE
Confidence 111 111 36 46899999997 55568888888888888633
No 200
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=93.38 E-value=0.39 Score=51.66 Aligned_cols=149 Identities=16% Similarity=0.164 Sum_probs=81.3
Q ss_pred CcEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeCCCCcc
Q 006671 416 GLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKPW 495 (636)
Q Consensus 416 GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~~~eil 495 (636)
+.+|+|.|+|.+|+.+++.|.+.|..|+. .|. |.+.+..+. .. + +.-+ +.++ +..++|
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvv-Id~----------d~~~v~~~~---~~-g-~~vi---~GDa---t~~~~L 61 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVV-LDH----------DPDHIETLR---KF-G-MKVF---YGDA---TRMDLL 61 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEE-EEC----------CHHHHHHHH---HT-T-CCCE---ESCT---TCHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEE-EEC----------CHHHHHHHH---hC-C-CeEE---EcCC---CCHHHH
Confidence 45799999999999999999999998654 454 344432222 11 1 1101 0111 111223
Q ss_pred ----ccccceEecCCCcCccchh---hHHHhhhcCceEEEeCCCCCCCHHHHHHHHHCCce-Eecccccccccceeecch
Q 006671 496 ----NERCDVAFPCASQNEIDQS---DAINLVNSGCRILVEGSNMPCTPEAVDVLKKANVL-IAPAMAAGAGGVVAGELE 567 (636)
Q Consensus 496 ----~~~cDIliPcA~~n~It~e---nA~~l~~~~akiVvEgAN~P~T~eA~~iL~~rGIl-viPD~~aNAGGVivS~~E 567 (636)
-..+|++|-|......+.. .|+.+ .-..++|+-.-| ++....|.+.|+- ++|.....+=-++...++
T Consensus 62 ~~agi~~A~~viv~~~~~~~n~~i~~~ar~~-~p~~~Iiara~~----~~~~~~L~~~Gad~Vi~~~~~~a~~la~~~L~ 136 (413)
T 3l9w_A 62 ESAGAAKAEVLINAIDDPQTNLQLTEMVKEH-FPHLQIIARARD----VDHYIRLRQAGVEKPERETFEGALKTGRLALE 136 (413)
T ss_dssp HHTTTTTCSEEEECCSSHHHHHHHHHHHHHH-CTTCEEEEEESS----HHHHHHHHHTTCSSCEETTHHHHHHHHHHHHH
T ss_pred HhcCCCccCEEEECCCChHHHHHHHHHHHHh-CCCCeEEEEECC----HHHHHHHHHCCCCEEECccHHHHHHHHHHHHH
Confidence 1378999887765444433 23333 124688887654 5677889999974 233222222222222222
Q ss_pred hccccCCCCCCHHHHHHHHHHHHHHHHHHH
Q 006671 568 LNQECNMVHWSPEDFESKLQEAMKQTYQRA 597 (636)
Q Consensus 568 ~~qN~~~~~ws~eeV~~rL~~~m~~~~~~v 597 (636)
.+..+.+++.+.++..-..-+..+
T Consensus 137 ------~lg~~~~~~~~~~~~~r~~~~~~~ 160 (413)
T 3l9w_A 137 ------SLGLGPYEARERADVFRRFNIQMV 160 (413)
T ss_dssp ------HTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred ------HcCCCHHHHHHHHHHHHHhHHHHH
Confidence 234667777777654433333333
No 201
>4dib_A GAPDH, glyceraldehyde 3-phosphate dehydrogenase; niaid, structural genomics, national institute of allergy AN infectious diseases; 2.55A {Bacillus anthracis}
Probab=93.36 E-value=0.2 Score=53.19 Aligned_cols=101 Identities=15% Similarity=0.265 Sum_probs=65.9
Q ss_pred cEEEEecCccHHHHHHHHHHHC-CCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccc------cCC--ce
Q 006671 417 LRCVVSGSGKIAMHVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKT------YAR--SK 487 (636)
Q Consensus 417 krVaIqGfGNVG~~aAe~L~e~-GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~------~p~--a~ 487 (636)
.||.|-|||-+|+.+.+.+.+. ...||+|.|. .|.+.+..|+++-...|++..-++. +.+ .+
T Consensus 5 ~kv~INGfGrIGr~v~Ra~~~~~~~~ivaINd~---------~d~~~~a~llkyDS~hG~f~~~v~~~~~~l~inGk~I~ 75 (345)
T 4dib_A 5 TRVAINGFGRIGRMVFRQAIKESAFEIVAINAS---------YPSETLAHLIKYDTVHGKFDGTVEAFEDHLLVDGKMIR 75 (345)
T ss_dssp CEEEEECCSHHHHHHHHHHTTCSSSEEEEEECS---------SCHHHHHHHHHEETTTEECSSCEEECSSEEEETTEEEE
T ss_pred EEEEEECCCcHHHHHHHHHHhCCCceEEEEcCC---------CCHHHHHHHhcccCCCCCCCCcEEEcCCEEEECCEEEE
Confidence 4899999999999999988875 5789999985 4677666665543333433221110 111 11
Q ss_pred eeC---CCC-cc-ccccceEecCCCcCccchhhHHHhhhcCceEE
Q 006671 488 YYD---EAK-PW-NERCDVAFPCASQNEIDQSDAINLVNSGCRIL 527 (636)
Q Consensus 488 ~i~---~~e-il-~~~cDIliPcA~~n~It~enA~~l~~~~akiV 527 (636)
.+. +++ .| +..+|+++.|+ +.-.+.+-|..-++.|||-|
T Consensus 76 v~~e~dp~~i~w~~~gvDiVlesT-G~f~s~e~a~~hl~aGAkkV 119 (345)
T 4dib_A 76 LLNNRDPKELPWTDLGVEVVIEAT-GKFNSKEKAILHVEAGAKKV 119 (345)
T ss_dssp EECCSCGGGSCTTTTTEEEEEECS-SSCCBHHHHTHHHHTTCSEE
T ss_pred EeecCChhhCCccccCccEEEEec-cCcCCHHHHHHHHHCCCCEE
Confidence 111 111 36 46899999997 55568888888778888643
No 202
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=93.33 E-value=0.048 Score=57.18 Aligned_cols=104 Identities=13% Similarity=0.231 Sum_probs=61.0
Q ss_pred cEEEEecCccHHHHHHHHHHH-CCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHH--hhcCCccccccccCCce-eeC--
Q 006671 417 LRCVVSGSGKIAMHVLEKLIA-YGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIK--SQQRSLRDYSKTYARSK-YYD-- 490 (636)
Q Consensus 417 krVaIqGfGNVG~~aAe~L~e-~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k--~~~g~l~~y~~~~p~a~-~i~-- 490 (636)
.||+|.|+|.+|+.+++.|.+ .+..+++|.|. +++ . ...+.... ...+.+......+.+.. .+.
T Consensus 2 ikVgIiGaG~iG~~l~r~L~~~~~~elvav~d~-----~~~---~--~~~~~~~~g~~~~~~~~~~v~~~~~~~l~v~~~ 71 (337)
T 1cf2_P 2 KAVAINGYGTVGKRVADAIAQQDDMKVIGVSKT-----RPD---F--EARMALKKGYDLYVAIPERVKLFEKAGIEVAGT 71 (337)
T ss_dssp EEEEEECCSTTHHHHHHHHHTSSSEEEEEEEES-----SCS---H--HHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEE
T ss_pred eEEEEEeECHHHHHHHHHHHcCCCcEEEEEEcC-----Chh---H--HHHhcCCcchhhccccccceeeecCCceEEcCC
Confidence 489999999999999999987 57899999986 221 1 11111110 00001100000000000 011
Q ss_pred CCCccccccceEecCCCcCccchhhHHHhhhcCceEEEeCCC
Q 006671 491 EAKPWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSN 532 (636)
Q Consensus 491 ~~eil~~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgAN 532 (636)
.++++ .+|||++-|+. ...+.+.+..+.+.|+++|.+++-
T Consensus 72 ~~~~~-~~vDvV~~atp-~~~~~~~a~~~l~aG~~VId~sp~ 111 (337)
T 1cf2_P 72 VDDML-DEADIVIDCTP-EGIGAKNLKMYKEKGIKAIFQGGE 111 (337)
T ss_dssp HHHHH-HTCSEEEECCS-TTHHHHHHHHHHHHTCCEEECTTS
T ss_pred HHHHh-cCCCEEEECCC-chhhHHHHHHHHHcCCEEEEecCC
Confidence 11122 37999999864 456777888888889999988764
No 203
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=93.31 E-value=1.1 Score=45.42 Aligned_cols=128 Identities=13% Similarity=0.164 Sum_probs=77.1
Q ss_pred cchhHHHHHHHHHHHHhCCCCCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhc
Q 006671 394 ATGYGLVFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQ 473 (636)
Q Consensus 394 ATG~GV~~~~~~~l~~~g~~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~ 473 (636)
-.+.|...+++ ..+.+ .+++|+|.|.|.+|+.++..|.+.|++-|.|.+. +.++...|.+..
T Consensus 102 TD~~G~~~~l~----~~~~~-~~~~vlvlGaGgaarav~~~L~~~G~~~i~v~nR----------t~~ka~~la~~~--- 163 (271)
T 1npy_A 102 TDYIAIVKLIE----KYHLN-KNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYAR----------NVKTGQYLAALY--- 163 (271)
T ss_dssp HHHHHHHHHHH----HTTCC-TTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECS----------CHHHHHHHHHHH---
T ss_pred CCHHHHHHHHH----HhCCC-CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeC----------CHHHHHHHHHHc---
Confidence 44566666654 34544 6789999999999999999999999865778876 233433232110
Q ss_pred CCccccccccCCceeeCCCCccccccceEecCCCcCccch---h----hHHHhhhcCceEEEeCCCCCCCHHHHHHHHHC
Q 006671 474 RSLRDYSKTYARSKYYDEAKPWNERCDVAFPCASQNEIDQ---S----DAINLVNSGCRILVEGSNMPCTPEAVDVLKKA 546 (636)
Q Consensus 474 g~l~~y~~~~p~a~~i~~~eil~~~cDIliPcA~~n~It~---e----nA~~l~~~~akiVvEgAN~P~T~eA~~iL~~r 546 (636)
+ ..+.+... ..++||+|-|..-..... + +...| . ...+|++-.-.|....-.+.-+++
T Consensus 164 ~-----------~~~~~~~~--~~~~DivInaTp~gm~~~~~~~~~~~~~~~l-~-~~~~v~DlvY~P~~T~ll~~A~~~ 228 (271)
T 1npy_A 164 G-----------YAYINSLE--NQQADILVNVTSIGMKGGKEEMDLAFPKAFI-D-NASVAFDVVAMPVETPFIRYAQAR 228 (271)
T ss_dssp T-----------CEEESCCT--TCCCSEEEECSSTTCTTSTTTTSCSSCHHHH-H-HCSEEEECCCSSSSCHHHHHHHHT
T ss_pred C-----------Cccchhhh--cccCCEEEECCCCCccCccccCCCCCCHHHc-C-CCCEEEEeecCCCCCHHHHHHHHC
Confidence 1 11111111 247899998877543211 1 11222 1 346888998888432455566788
Q ss_pred CceEeccc
Q 006671 547 NVLIAPAM 554 (636)
Q Consensus 547 GIlviPD~ 554 (636)
|+.++++.
T Consensus 229 G~~~i~Gl 236 (271)
T 1npy_A 229 GKQTISGA 236 (271)
T ss_dssp TCEEECHH
T ss_pred CCEEECCH
Confidence 87765443
No 204
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=93.22 E-value=0.16 Score=52.08 Aligned_cols=110 Identities=17% Similarity=0.147 Sum_probs=63.5
Q ss_pred CcEEEEecCccHHHHHHHHHHHCCC-EEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeCC-CC
Q 006671 416 GLRCVVSGSGKIAMHVLEKLIAYGA-IPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE-AK 493 (636)
Q Consensus 416 GkrVaIqGfGNVG~~aAe~L~e~GA-kVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~~-~e 493 (636)
-++|.|.|+|++|..+|+.|.+.|. . |.+.|.+ + +.+.++.+. + . +....+. .+
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~G~~~-V~~~dr~-----~---~~~~~~~~~---~-~-----------g~~~~~~~~e 79 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQAGAID-MAAYDAA-----S---AESWRPRAE---E-L-----------GVSCKASVAE 79 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHSCCE-EEEECSS-----C---HHHHHHHHH---H-T-----------TCEECSCHHH
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCCe-EEEEcCC-----C---CHHHHHHHH---H-C-----------CCEEeCCHHH
Confidence 4689999999999999999999998 6 5666752 1 122222111 1 1 2222211 11
Q ss_pred ccccccceEecCCCcCccchhhHHHhhh---cCceEEEeCCC-CCC-CHHHHHHHHHC--CceEec
Q 006671 494 PWNERCDVAFPCASQNEIDQSDAINLVN---SGCRILVEGSN-MPC-TPEAVDVLKKA--NVLIAP 552 (636)
Q Consensus 494 il~~~cDIliPcA~~n~It~enA~~l~~---~~akiVvEgAN-~P~-T~eA~~iL~~r--GIlviP 552 (636)
. -.+|||+|-|-......+ .+..+.. .++ +|+.-.+ .|. +.+..+.+.++ |+.|+.
T Consensus 80 ~-~~~aDvVi~~vp~~~~~~-~~~~l~~~l~~~~-ivvd~st~~~~~~~~~~~~~~~~~~g~~~vd 142 (312)
T 3qsg_A 80 V-AGECDVIFSLVTAQAALE-VAQQAGPHLCEGA-LYADFTSCSPAVKRAIGDVISRHRPSAQYAA 142 (312)
T ss_dssp H-HHHCSEEEECSCTTTHHH-HHHHHGGGCCTTC-EEEECCCCCHHHHHHHHHHHHHHCTTCEEEE
T ss_pred H-HhcCCEEEEecCchhHHH-HHHhhHhhcCCCC-EEEEcCCCCHHHHHHHHHHHHhhcCCCeEEe
Confidence 1 237999999887665433 3444432 233 5554443 343 33445667777 887764
No 205
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=93.14 E-value=0.3 Score=44.73 Aligned_cols=112 Identities=16% Similarity=0.029 Sum_probs=62.2
Q ss_pred CcEEEEecC----ccHHHHHHHHHHHCCCEEEEEeCCCCceeCCC--CCCHHHHHHHHHHHhhcCCccccccccCCceee
Q 006671 416 GLRCVVSGS----GKIAMHVLEKLIAYGAIPVSVSDAKGYLVDED--GFDYMKISFLRDIKSQQRSLRDYSKTYARSKYY 489 (636)
Q Consensus 416 GkrVaIqGf----GNVG~~aAe~L~e~GAkVVaVSDs~G~Iydpd--GLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i 489 (636)
-++|+|+|. |++|..+++.|.+.|.+|..| ||+ +=.+ ..+.- |+...
T Consensus 13 p~~vaVvGas~~~g~~G~~~~~~l~~~G~~v~~v--------np~~~~~~i-------------~G~~~----~~sl~-- 65 (140)
T 1iuk_A 13 AKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPV--------NPRFQGEEL-------------FGEEA----VASLL-- 65 (140)
T ss_dssp CCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEE--------CGGGTTSEE-------------TTEEC----BSSGG--
T ss_pred CCEEEEECCCCCCCChHHHHHHHHHHCCCEEEEe--------CCCcccCcC-------------CCEEe----cCCHH--
Confidence 468999999 899999999999999985444 332 1000 00111 12111
Q ss_pred CCCCccccccceEecCCCcCccchhhHHHhhhcCceEEEeCCCCCCCHHHHHHHHHCCceEeccccccccccee
Q 006671 490 DEAKPWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANVLIAPAMAAGAGGVVA 563 (636)
Q Consensus 490 ~~~eil~~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~~iL~~rGIlviPD~~aNAGGViv 563 (636)
++ ..++|+.+-|-.. ....+-++.+++.+++.|+=-+- -...++.++.+++|+.++= -|+=|++.
T Consensus 66 ---el-~~~vDlavi~vp~-~~~~~v~~~~~~~gi~~i~~~~g-~~~~~~~~~a~~~Gir~vg---pnc~g~~~ 130 (140)
T 1iuk_A 66 ---DL-KEPVDILDVFRPP-SALMDHLPEVLALRPGLVWLQSG-IRHPEFEKALKEAGIPVVA---DRCLMVEH 130 (140)
T ss_dssp ---GC-CSCCSEEEECSCH-HHHTTTHHHHHHHCCSCEEECTT-CCCHHHHHHHHHTTCCEEE---SCCHHHHH
T ss_pred ---HC-CCCCCEEEEEeCH-HHHHHHHHHHHHcCCCEEEEcCC-cCHHHHHHHHHHcCCEEEc---CCccceEC
Confidence 11 1256766655443 12222233333446655542221 1467888999999998761 25545443
No 206
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=93.02 E-value=0.22 Score=49.76 Aligned_cols=107 Identities=14% Similarity=0.169 Sum_probs=62.7
Q ss_pred cEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeCC-CCcc
Q 006671 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE-AKPW 495 (636)
Q Consensus 417 krVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~~-~eil 495 (636)
++|.|.|+|++|...++.|.+.|..| .+.|. +.+.+..+ .+. + ....+. ++.+
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~g~~V-~~~~~----------~~~~~~~~---~~~-g-----------~~~~~~~~~~~ 58 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKEGVTV-YAFDL----------MEANVAAV---VAQ-G-----------AQACENNQKVA 58 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHTTCEE-EEECS----------SHHHHHHH---HTT-T-----------CEECSSHHHHH
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeE-EEEeC----------CHHHHHHH---HHC-C-----------CeecCCHHHHH
Confidence 68999999999999999999999985 46665 23333222 111 1 111111 1122
Q ss_pred ccccceEecCCCcCccchhhHH---Hh---hhcCceEEEeCCCCC--CCHHHHHHHHHCCceEe
Q 006671 496 NERCDVAFPCASQNEIDQSDAI---NL---VNSGCRILVEGSNMP--CTPEAVDVLKKANVLIA 551 (636)
Q Consensus 496 ~~~cDIliPcA~~n~It~enA~---~l---~~~~akiVvEgAN~P--~T~eA~~iL~~rGIlvi 551 (636)
.+||+++-|........+-.. .| +..+ ++|+.-+|+. .+.+..+.+.++|+.++
T Consensus 59 -~~~D~vi~~vp~~~~~~~v~~~~~~l~~~l~~~-~~vv~~~~~~~~~~~~l~~~~~~~g~~~~ 120 (301)
T 3cky_A 59 -AASDIIFTSLPNAGIVETVMNGPGGVLSACKAG-TVIVDMSSVSPSSTLKMAKVAAEKGIDYV 120 (301)
T ss_dssp -HHCSEEEECCSSHHHHHHHHHSTTCHHHHSCTT-CEEEECCCCCHHHHHHHHHHHHHTTCEEE
T ss_pred -hCCCEEEEECCCHHHHHHHHcCcchHhhcCCCC-CEEEECCCCCHHHHHHHHHHHHHcCCeEE
Confidence 269999998854332222221 12 1223 4666667765 33445567778898876
No 207
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=92.91 E-value=0.34 Score=47.91 Aligned_cols=107 Identities=13% Similarity=0.067 Sum_probs=61.2
Q ss_pred cEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeCCCCccc
Q 006671 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKPWN 496 (636)
Q Consensus 417 krVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~~~eil~ 496 (636)
++|.|.|+|++|...+..|.+ |..| .+.|. + .+.+..+.+ . + + ...+..+.+
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~~V-~~~~~-----~-----~~~~~~~~~---~-g-~----------~~~~~~~~~- 53 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RFPT-LVWNR-----T-----FEKALRHQE---E-F-G----------SEAVPLERV- 53 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TSCE-EEECS-----S-----THHHHHHHH---H-H-C----------CEECCGGGG-
T ss_pred CeEEEEcccHHHHHHHHHHhC-CCeE-EEEeC-----C-----HHHHHHHHH---C-C-C----------cccCHHHHH-
Confidence 379999999999999999999 9984 56665 2 223222221 1 1 1 111112222
Q ss_pred cccceEecCCCcCccchhhHHHhh---hcCceEEEeCCCCC-CC-HHHHHHHHHCCceEec
Q 006671 497 ERCDVAFPCASQNEIDQSDAINLV---NSGCRILVEGSNMP-CT-PEAVDVLKKANVLIAP 552 (636)
Q Consensus 497 ~~cDIliPcA~~n~It~enA~~l~---~~~akiVvEgAN~P-~T-~eA~~iL~~rGIlviP 552 (636)
.+||+++-|........+-...+. ..++ +|+.-.|.. .+ .+..+.+.++|+.+++
T Consensus 54 ~~~D~vi~~v~~~~~~~~v~~~l~~~l~~~~-~vv~~s~~~~~~~~~l~~~~~~~g~~~~~ 113 (289)
T 2cvz_A 54 AEARVIFTCLPTTREVYEVAEALYPYLREGT-YWVDATSGEPEASRRLAERLREKGVTYLD 113 (289)
T ss_dssp GGCSEEEECCSSHHHHHHHHHHHTTTCCTTE-EEEECSCCCHHHHHHHHHHHHTTTEEEEE
T ss_pred hCCCEEEEeCCChHHHHHHHHHHHhhCCCCC-EEEECCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 379999999876542233333332 2233 555555643 32 3345667777887764
No 208
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=92.83 E-value=0.12 Score=52.41 Aligned_cols=103 Identities=16% Similarity=0.184 Sum_probs=67.1
Q ss_pred CcEEEEecCccHHHHHHHHHHH----CCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeCC
Q 006671 416 GLRCVVSGSGKIAMHVLEKLIA----YGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE 491 (636)
Q Consensus 416 GkrVaIqGfGNVG~~aAe~L~e----~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~~ 491 (636)
-.||+|+|+|++|..-++.|.. .+.++++|+|.+- + . ..| +..+.+-
T Consensus 7 ~~rvgiIG~G~iG~~~~~~l~~~~~~~~~~lvav~d~~~-------~--a---------------~~~-----g~~~~~~ 57 (294)
T 1lc0_A 7 KFGVVVVGVGRAGSVRLRDLKDPRSAAFLNLIGFVSRRE-------L--G---------------SLD-----EVRQISL 57 (294)
T ss_dssp SEEEEEECCSHHHHHHHHHHTSHHHHTTEEEEEEECSSC-------C--C---------------EET-----TEEBCCH
T ss_pred cceEEEEEEcHHHHHHHHHHhccccCCCEEEEEEECchH-------H--H---------------HHc-----CCCCCCH
Confidence 4689999999999987777754 4789999999631 0 0 000 1111122
Q ss_pred CCccc-cccceEecCCCcCccchhhHHHhhhcCceEEEeCCCCCC--CH-HHHHH---HHHCCceEe
Q 006671 492 AKPWN-ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPC--TP-EAVDV---LKKANVLIA 551 (636)
Q Consensus 492 ~eil~-~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgAN~P~--T~-eA~~i---L~~rGIlvi 551 (636)
++++. .++|+++-|.. +..+.+.+...++.|..++||= |+ |. +++++ .+++|+.+.
T Consensus 58 ~ell~~~~vD~V~i~tp-~~~H~~~~~~al~aGkhVl~EK---Pla~~~~ea~~l~~~a~~~g~~~~ 120 (294)
T 1lc0_A 58 EDALRSQEIDVAYICSE-SSSHEDYIRQFLQAGKHVLVEY---PMTLSFAAAQELWELAAQKGRVLH 120 (294)
T ss_dssp HHHHHCSSEEEEEECSC-GGGHHHHHHHHHHTTCEEEEES---CSCSCHHHHHHHHHHHHHTTCCEE
T ss_pred HHHhcCCCCCEEEEeCC-cHhHHHHHHHHHHCCCcEEEeC---CCCCCHHHHHHHHHHHHHhCCEEE
Confidence 33443 46899888875 5678888888888899999983 53 33 34433 356776654
No 209
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=92.79 E-value=0.42 Score=50.18 Aligned_cols=95 Identities=13% Similarity=0.049 Sum_probs=60.6
Q ss_pred cEEEEec-CccHHHHHHHHHHHCC-CEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeCCCCc
Q 006671 417 LRCVVSG-SGKIAMHVLEKLIAYG-AIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKP 494 (636)
Q Consensus 417 krVaIqG-fGNVG~~aAe~L~e~G-AkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~~~ei 494 (636)
.+|+|.| +|.||+.+++.|.+.. ..++++++. ...|..++.. .+.+... ....+.+.++
T Consensus 5 ~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~-----~~~g~~~~~~---------~~~~~g~----~~~~~~~~~~- 65 (345)
T 2ozp_A 5 KTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSR-----RFAGEPVHFV---------HPNLRGR----TNLKFVPPEK- 65 (345)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCS-----TTTTSBGGGT---------CGGGTTT----CCCBCBCGGG-
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECc-----hhhCchhHHh---------CchhcCc----ccccccchhH-
Confidence 6899999 8999999999998765 488998885 2234322210 1111110 0011111112
Q ss_pred cccccceEecCCCcCccchhhHHHhhhcCceEEEeCCC
Q 006671 495 WNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSN 532 (636)
Q Consensus 495 l~~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgAN 532 (636)
| .+||+++-|+ ....+.+.+..+.+.|+++|-=++.
T Consensus 66 ~-~~vDvV~~a~-g~~~s~~~a~~~~~aG~~VId~Sa~ 101 (345)
T 2ozp_A 66 L-EPADILVLAL-PHGVFAREFDRYSALAPVLVDLSAD 101 (345)
T ss_dssp C-CCCSEEEECC-CTTHHHHTHHHHHTTCSEEEECSST
T ss_pred h-cCCCEEEEcC-CcHHHHHHHHHHHHCCCEEEEcCcc
Confidence 5 5899999886 4556788888888889998876654
No 210
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=92.74 E-value=1.1 Score=45.14 Aligned_cols=36 Identities=22% Similarity=0.315 Sum_probs=30.7
Q ss_pred CCCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEeCC
Q 006671 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSDA 448 (636)
Q Consensus 412 ~~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVSDs 448 (636)
.||+||+++|.| .+-+|..+|+.|.+.|++|+ +.|.
T Consensus 3 ~sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv-~~~~ 39 (254)
T 4fn4_A 3 QSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVV-AVEL 39 (254)
T ss_dssp GGGTTCEEEEETTTSHHHHHHHHHHHHTTCEEE-EEES
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEE-EEEC
Confidence 378999999998 57799999999999999964 5665
No 211
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=92.57 E-value=0.39 Score=49.39 Aligned_cols=112 Identities=11% Similarity=0.004 Sum_probs=64.9
Q ss_pred cEEEEecCccHHHHHHHHHHHCC-CEEEEEeCCCCceeCCCCCCH-HHHHHHHHHHhhcCCccccccccCCceee-CCCC
Q 006671 417 LRCVVSGSGKIAMHVLEKLIAYG-AIPVSVSDAKGYLVDEDGFDY-MKISFLRDIKSQQRSLRDYSKTYARSKYY-DEAK 493 (636)
Q Consensus 417 krVaIqGfGNVG~~aAe~L~e~G-AkVVaVSDs~G~IydpdGLDv-e~L~~L~~~k~~~g~l~~y~~~~p~a~~i-~~~e 493 (636)
++|.|.|+|++|..+|..|.+.| ..| .+.|. +++-.+. +++ +..+.+ . +. .- +..+
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~G~~~V-~~~dr-----~~~~~~~~~~~--~~~~~~-~-----------g~-~~~s~~e 83 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGRNAARL-AAYDL-----RFNDPAASGAL--RARAAE-L-----------GV-EPLDDVA 83 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEE-EEECG-----GGGCTTTHHHH--HHHHHH-T-----------TC-EEESSGG
T ss_pred CeEEEECccHHHHHHHHHHHHcCCCeE-EEEeC-----CCccccchHHH--HHHHHH-C-----------CC-CCCCHHH
Confidence 68999999999999999999999 874 56675 3322211 111 111111 1 12 11 2222
Q ss_pred ccccccceEecCCCcCccchhhHHHhhh---cCceEEEeCCC-CC-CCHHHHHHHHHCCceEec
Q 006671 494 PWNERCDVAFPCASQNEIDQSDAINLVN---SGCRILVEGSN-MP-CTPEAVDVLKKANVLIAP 552 (636)
Q Consensus 494 il~~~cDIliPcA~~n~It~enA~~l~~---~~akiVvEgAN-~P-~T~eA~~iL~~rGIlviP 552 (636)
.. .+|||+|-|-....... .+..+.. .+ ++|+.-++ .| ++.+..+.+.++|+.++.
T Consensus 84 ~~-~~aDvVi~avp~~~~~~-~~~~i~~~l~~~-~ivv~~st~~p~~~~~~~~~l~~~g~~~~d 144 (317)
T 4ezb_A 84 GI-ACADVVLSLVVGAATKA-VAASAAPHLSDE-AVFIDLNSVGPDTKALAAGAIATGKGSFVE 144 (317)
T ss_dssp GG-GGCSEEEECCCGGGHHH-HHHHHGGGCCTT-CEEEECCSCCHHHHHHHHHHHHTSSCEEEE
T ss_pred HH-hcCCEEEEecCCHHHHH-HHHHHHhhcCCC-CEEEECCCCCHHHHHHHHHHHHHcCCeEEe
Confidence 22 37999999887665433 3344432 23 35555444 33 334455778889987764
No 212
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=92.55 E-value=0.17 Score=55.31 Aligned_cols=118 Identities=15% Similarity=0.066 Sum_probs=68.1
Q ss_pred cEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeC-CCCcc
Q 006671 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD-EAKPW 495 (636)
Q Consensus 417 krVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~-~~eil 495 (636)
++|.|.|.|++|..+|..|.+.|..| .+.|. +.++++.+.+ ..+.... -.+....+ .+++.
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G~~V-~v~dr----------~~~~~~~l~~---~~g~~~~----~~~i~~~~~~~e~v 63 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKGFKV-AVFNR----------TYSKSEEFMK---ANASAPF----AGNLKAFETMEAFA 63 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCE-EEECS----------SHHHHHHHHH---HTTTSTT----GGGEEECSCHHHHH
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCEE-EEEeC----------CHHHHHHHHH---hcCCCCC----CCCeEEECCHHHHH
Confidence 47999999999999999999999984 56665 3344333322 1111000 00111111 12222
Q ss_pred cc--ccceEecCCCcCccchhhHHHhhh-c-CceEEEeCCCCC--CCHHHHHHHHHCCceEec
Q 006671 496 NE--RCDVAFPCASQNEIDQSDAINLVN-S-GCRILVEGSNMP--CTPEAVDVLKKANVLIAP 552 (636)
Q Consensus 496 ~~--~cDIliPcA~~n~It~enA~~l~~-~-~akiVvEgAN~P--~T~eA~~iL~~rGIlviP 552 (636)
.. +||+++-|.....-..+.+..|.. . .-++|+..+|+. .|.+..+.+.++|+.++.
T Consensus 64 ~~l~~aDvVilaVp~~~~v~~vl~~l~~~l~~g~iIId~sng~~~~~~~l~~~l~~~g~~~v~ 126 (478)
T 1pgj_A 64 ASLKKPRKALILVQAGAATDSTIEQLKKVFEKGDILVDTGNAHFKDQGRRAQQLEAAGLRFLG 126 (478)
T ss_dssp HHBCSSCEEEECCCCSHHHHHHHHHHHHHCCTTCEEEECCCCCHHHHHHHHHHHHTTTCEEEE
T ss_pred hcccCCCEEEEecCChHHHHHHHHHHHhhCCCCCEEEECCCCChHHHHHHHHHHHHCCCeEEE
Confidence 22 599999888775333333333321 1 235778888876 234455677788987763
No 213
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=92.37 E-value=0.091 Score=53.89 Aligned_cols=36 Identities=31% Similarity=0.433 Sum_probs=32.0
Q ss_pred CCCCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeC
Q 006671 412 KELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSD 447 (636)
Q Consensus 412 ~~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSD 447 (636)
.+++|++|+|+|.|.||...++.|.+.|++|+-|+.
T Consensus 9 ~~l~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap 44 (274)
T 1kyq_A 9 HQLKDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSP 44 (274)
T ss_dssp ECCTTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEE
T ss_pred EEcCCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcC
Confidence 478999999999999999999999999999765543
No 214
>3v1y_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosol; rossmann fold; HET: NAD; 1.86A {Oryza sativa japonica group} PDB: 3e5r_O* 3e6a_O
Probab=92.22 E-value=0.4 Score=50.66 Aligned_cols=102 Identities=13% Similarity=0.211 Sum_probs=66.5
Q ss_pred cEEEEecCccHHHHHHHHHHHC-CCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccc-cccc-------cCC--
Q 006671 417 LRCVVSGSGKIAMHVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRD-YSKT-------YAR-- 485 (636)
Q Consensus 417 krVaIqGfGNVG~~aAe~L~e~-GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~-y~~~-------~p~-- 485 (636)
.||.|-|||-+|+.+.+.+.+. ...||+|.|. ..|.+.+..|+++-...|++.. -++. +.+
T Consensus 4 ~kv~INGfGrIGr~v~R~~~~~~~~~ivaiNd~--------~~d~~~~a~l~kyDS~hG~f~~~~v~~~~~~~l~i~Gk~ 75 (337)
T 3v1y_O 4 IKIGINGFGRIGRLVARVALQSEDVELVAVNDP--------FITTDYMTYMFKYDTVHGQWKHSDIKIKDSKTLLLGEKP 75 (337)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCSSEEEEEEECT--------TSCHHHHHHHHHCCTTTCCCCSSCEEEEETTEEEETTEE
T ss_pred eEEEEECCChHHHHHHHHHHhCCCcEEEEEeCC--------CCCHHHHHHHhhhccCCCcccCceEEEcCCcEEEECCEE
Confidence 5899999999999999998876 4689999875 2477776666655444454432 1100 111
Q ss_pred ceeeCCCC----cc-ccccceEecCCCcCccchhhHHHhhhcCceEE
Q 006671 486 SKYYDEAK----PW-NERCDVAFPCASQNEIDQSDAINLVNSGCRIL 527 (636)
Q Consensus 486 a~~i~~~e----il-~~~cDIliPcA~~n~It~enA~~l~~~~akiV 527 (636)
.+.+...+ .| +..+|+++.|+ +.-.+.+-|+.-++.|||-|
T Consensus 76 I~v~~e~dp~~i~w~~~gvDiVlesT-G~f~s~e~a~~hl~aGAkkV 121 (337)
T 3v1y_O 76 VTVFGIRNPDEIPWAEAGAEYVVEST-GVFTDKEKAAAHLKGGAKKV 121 (337)
T ss_dssp EEEECCSSGGGCCHHHHTCCEEEECS-SSCCSHHHHTHHHHTTCCEE
T ss_pred EEEEEecCcccCCccccCCcEEEEec-cccCCHHHHHHHHHcCCCEE
Confidence 11111111 35 45899999997 55568888888778888633
No 215
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=92.17 E-value=0.27 Score=54.10 Aligned_cols=115 Identities=10% Similarity=0.047 Sum_probs=68.2
Q ss_pred CcEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeC-CCCc
Q 006671 416 GLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD-EAKP 494 (636)
Q Consensus 416 GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~-~~ei 494 (636)
..+|.|.|.|++|..+|..|.+.|..| .+.|. +.++++.+.+- ..+ . .+....+ .+++
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~G~~V-~v~dr----------~~~~~~~l~~~--~~~---~-----~gi~~~~s~~e~ 68 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADHGFTV-CAYNR----------TQSKVDHFLAN--EAK---G-----KSIIGATSIEDF 68 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCE-EEECS----------SSHHHHHHHHT--TTT---T-----SSEECCSSHHHH
T ss_pred CCCEEEEeeHHHHHHHHHHHHHCCCEE-EEEeC----------CHHHHHHHHcc--ccc---C-----CCeEEeCCHHHH
Confidence 358999999999999999999999985 56665 22333222210 100 0 0111111 1112
Q ss_pred cc--cccceEecCCCcCccchhhHHHhhh-c-CceEEEeCCCCCC--CHHHHHHHHHCCceEe
Q 006671 495 WN--ERCDVAFPCASQNEIDQSDAINLVN-S-GCRILVEGSNMPC--TPEAVDVLKKANVLIA 551 (636)
Q Consensus 495 l~--~~cDIliPcA~~n~It~enA~~l~~-~-~akiVvEgAN~P~--T~eA~~iL~~rGIlvi 551 (636)
.. .+||++|-|-.......+.+..|.. . .-++|+..+|... |.+..+.|.++|+.++
T Consensus 69 v~~l~~aDvVil~Vp~~~~v~~vl~~l~~~l~~g~iIId~s~~~~~~~~~l~~~l~~~g~~~v 131 (497)
T 2p4q_A 69 ISKLKRPRKVMLLVKAGAPVDALINQIVPLLEKGDIIIDGGNSHFPDSNRRYEELKKKGILFV 131 (497)
T ss_dssp HHTSCSSCEEEECCCSSHHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEE
T ss_pred HhcCCCCCEEEEEcCChHHHHHHHHHHHHhCCCCCEEEECCCCChhHHHHHHHHHHHcCCcee
Confidence 21 1489999888775444444444432 1 2357888888753 3445567888898876
No 216
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=92.15 E-value=0.46 Score=48.54 Aligned_cols=110 Identities=14% Similarity=0.154 Sum_probs=68.7
Q ss_pred CcEEEEecC-ccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeCC-CC
Q 006671 416 GLRCVVSGS-GKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE-AK 493 (636)
Q Consensus 416 GkrVaIqGf-GNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~~-~e 493 (636)
..||+|+|+ |++|+..++.|.+.|.++|+..|.... |- + + + +...++. ++
T Consensus 7 ~~rVaViG~sG~~G~~~~~~l~~~g~~~V~~V~p~~~-----g~---~-------------~--~-----G~~vy~sl~e 58 (288)
T 2nu8_A 7 NTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKG-----GT---T-------------H--L-----GLPVFNTVRE 58 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCT-----TC---E-------------E--T-----TEEEESSHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCcc-----cc---e-------------e--C-----CeeccCCHHH
Confidence 468999998 999999999999999998877665310 10 0 0 0 1111111 12
Q ss_pred ccc-cccceEecCCCcCccchhhHHHhhhcCceEEEeCCCCCCCH---HHHHHHHHCCceEe-ccc
Q 006671 494 PWN-ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTP---EAVDVLKKANVLIA-PAM 554 (636)
Q Consensus 494 il~-~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~---eA~~iL~~rGIlvi-PD~ 554 (636)
+.. .++|+++-|... ....+.+...++.+++++++.+-+.... +..+..+++|+.++ |..
T Consensus 59 l~~~~~~D~viI~tP~-~~~~~~~~ea~~~Gi~~iVi~t~G~~~~~~~~l~~~A~~~gv~liGPNc 123 (288)
T 2nu8_A 59 AVAATGATASVIYVPA-PFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEAGVRMIGPNT 123 (288)
T ss_dssp HHHHHCCCEEEECCCG-GGHHHHHHHHHHTTCSEEEECCCCCCHHHHHHHHHHHHHHTCEEECSSC
T ss_pred HhhcCCCCEEEEecCH-HHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCCEEEecCC
Confidence 221 267888877654 3566777777788999877755433222 34456678898554 654
No 217
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=92.14 E-value=0.25 Score=50.27 Aligned_cols=79 Identities=13% Similarity=0.225 Sum_probs=55.7
Q ss_pred CcEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceee-CCCCc
Q 006671 416 GLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYY-DEAKP 494 (636)
Q Consensus 416 GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i-~~~ei 494 (636)
-+||.|.|+||||+.+++. . +..+++|.| +..| .+ +.... +-+++
T Consensus 12 ~~rV~i~G~GaIG~~v~~~--~-~leLv~v~~------~k~g-----------------el--------gv~a~~d~d~l 57 (253)
T 1j5p_A 12 HMTVLIIGMGNIGKKLVEL--G-NFEKIYAYD------RISK-----------------DI--------PGVVRLDEFQV 57 (253)
T ss_dssp CCEEEEECCSHHHHHHHHH--S-CCSEEEEEC------SSCC-----------------CC--------SSSEECSSCCC
T ss_pred cceEEEECcCHHHHHHHhc--C-CcEEEEEEe------cccc-----------------cc--------CceeeCCHHHH
Confidence 4799999999999999998 4 889999887 2222 01 11112 23566
Q ss_pred cccccceEecCCCcCccchhhHHHhhhcCceEEEeC
Q 006671 495 WNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEG 530 (636)
Q Consensus 495 l~~~cDIliPcA~~n~It~enA~~l~~~~akiVvEg 530 (636)
+. ++|+++.||....+.+ .+.++++.|+.+|+-.
T Consensus 58 la-~pD~VVe~A~~~av~e-~~~~iL~aG~dvv~~S 91 (253)
T 1j5p_A 58 PS-DVSTVVECASPEAVKE-YSLQILKNPVNYIIIS 91 (253)
T ss_dssp CT-TCCEEEECSCHHHHHH-HHHHHTTSSSEEEECC
T ss_pred hh-CCCEEEECCCHHHHHH-HHHHHHHCCCCEEEcC
Confidence 66 9999999997765443 3666777888888643
No 218
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=92.13 E-value=0.17 Score=51.01 Aligned_cols=46 Identities=28% Similarity=0.295 Sum_probs=36.1
Q ss_pred hhHHHHHHHHHHHHhCCCCCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeCC
Q 006671 396 GYGLVFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (636)
Q Consensus 396 G~GV~~~~~~~l~~~g~~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs 448 (636)
|+|.+.++++ . +++| ++.|.|.|++|+.++..|.+.|++-|.|.+.
T Consensus 95 ~~G~~~~l~~----~--~~~~-~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR 140 (253)
T 3u62_A 95 WVGVVKSLEG----V--EVKE-PVVVVGAGGAARAVIYALLQMGVKDIWVVNR 140 (253)
T ss_dssp HHHHHHHTTT----C--CCCS-SEEEECCSHHHHHHHHHHHHTTCCCEEEEES
T ss_pred HHHHHHHHHh----c--CCCC-eEEEECcHHHHHHHHHHHHHcCCCEEEEEeC
Confidence 4565555542 2 5788 9999999999999999999999844677776
No 219
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=92.10 E-value=0.22 Score=50.20 Aligned_cols=50 Identities=24% Similarity=0.233 Sum_probs=40.2
Q ss_pred chhHHHHHHHHHHHHhCCCCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEeCC
Q 006671 395 TGYGLVFFAQLILADMNKELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSDA 448 (636)
Q Consensus 395 TG~GV~~~~~~~l~~~g~~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVSDs 448 (636)
+++|.+..++..+ +.+++|++++|.| .|-+|+.+++.|.+.|++ |.+.+.
T Consensus 101 d~~g~~~~l~~~~---~~~l~gk~vlVtGaaGGiG~aia~~L~~~G~~-V~i~~R 151 (287)
T 1lu9_A 101 TAAAGVALVVKAA---GGSVKGKKAVVLAGTGPVGMRSAALLAGEGAE-VVLCGR 151 (287)
T ss_dssp HHHHHHHHHHHHT---TSCCTTCEEEEETCSSHHHHHHHHHHHHTTCE-EEEEES
T ss_pred hHHHHHHHHHHhh---ccCCCCCEEEEECCCcHHHHHHHHHHHHCcCE-EEEEEC
Confidence 4567666655321 6678999999999 999999999999999999 666665
No 220
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=91.99 E-value=0.15 Score=54.72 Aligned_cols=113 Identities=9% Similarity=-0.015 Sum_probs=71.9
Q ss_pred CCcEEEEecC----ccHHHHHHHHHHHC--CCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCcee
Q 006671 415 KGLRCVVSGS----GKIAMHVLEKLIAY--GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKY 488 (636)
Q Consensus 415 ~GkrVaIqGf----GNVG~~aAe~L~e~--GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~ 488 (636)
+-.||+|+|+ |.+|...++.|.+. +++||+|+|. +.+++..+ .+..+ + +....
T Consensus 19 ~~irvgiIG~g~~gG~~g~~~~~~l~~~~~~~~lvav~d~----------~~~~~~~~---a~~~g-~-------~~~~~ 77 (438)
T 3btv_A 19 APIRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSP----------KIETSIAT---IQRLK-L-------SNATA 77 (438)
T ss_dssp CCEEEEEESCCTTSSSTTTTHHHHHHHTTTTEEEEEEECS----------SHHHHHHH---HHHTT-C-------TTCEE
T ss_pred CCCEEEEEcccCCCChHHHHHHHHHHhcCCCeEEEEEEeC----------CHHHHHHH---HHHcC-C-------Cccee
Confidence 3469999999 99999888888876 7899999997 33333222 11111 1 11112
Q ss_pred eC-CCCccc-cccceEecCCCcCccchhhHHHhhhcC------ceEEEeCCCCCC--CH-HHHH---HHHHCCceEec
Q 006671 489 YD-EAKPWN-ERCDVAFPCASQNEIDQSDAINLVNSG------CRILVEGSNMPC--TP-EAVD---VLKKANVLIAP 552 (636)
Q Consensus 489 i~-~~eil~-~~cDIliPcA~~n~It~enA~~l~~~~------akiVvEgAN~P~--T~-eA~~---iL~~rGIlviP 552 (636)
.+ -++++. .++|+++-|.. +..+.+.+...++.| ..++||= |+ |. ++.+ ..+++|+.+..
T Consensus 78 ~~~~~~ll~~~~vD~V~i~tp-~~~H~~~~~~al~aG~~~~~~khVl~EK---P~a~~~~e~~~l~~~a~~~g~~~~v 151 (438)
T 3btv_A 78 FPTLESFASSSTIDMIVIAIQ-VASHYEVVMPLLEFSKNNPNLKYLFVEW---ALACSLDQAESIYKAAAERGVQTII 151 (438)
T ss_dssp ESSHHHHHHCSSCSEEEECSC-HHHHHHHHHHHHHHGGGCTTCCEEEEES---SCCSSHHHHHHHHHHHHTTTCEEEE
T ss_pred eCCHHHHhcCCCCCEEEEeCC-cHHHHHHHHHHHHCCCCcccceeEEecC---cccCCHHHHHHHHHHHHHcCCeEEE
Confidence 22 234553 47999998875 556777777777778 8899993 42 33 3433 34677876553
No 221
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=91.99 E-value=0.2 Score=52.84 Aligned_cols=117 Identities=15% Similarity=0.129 Sum_probs=71.1
Q ss_pred CCCcEEEEecCcc---HHHHHHHHHHHCC-CEEEE-EeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCcee
Q 006671 414 LKGLRCVVSGSGK---IAMHVLEKLIAYG-AIPVS-VSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKY 488 (636)
Q Consensus 414 l~GkrVaIqGfGN---VG~~aAe~L~e~G-AkVVa-VSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~ 488 (636)
++-.||.|+|+|. +|..-+..+...+ +.+|+ |+|. |.+....+ .+..+ + |....
T Consensus 10 m~~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~----------~~~~a~~~---a~~~g-~-------~~~~~ 68 (398)
T 3dty_A 10 PQPIRWAMVGGGSQSQIGYIHRCAALRDNTFVLVAGAFDI----------DPIRGSAF---GEQLG-V-------DSERC 68 (398)
T ss_dssp CSCEEEEEEECCTTCSSHHHHHHHHHGGGSEEEEEEECCS----------SHHHHHHH---HHHTT-C-------CGGGB
T ss_pred cCcceEEEEcCCccchhHHHHHHHHhhCCCeEEEEEEeCC----------CHHHHHHH---HHHhC-C-------Cccee
Confidence 3457999999999 9987777776654 78888 7886 33333222 11111 1 11111
Q ss_pred eC-CCCccc------cccceEecCCCcCccchhhHHHhhhcCceEEEeCCCCCCCHHHHH---HHHHCCceEec
Q 006671 489 YD-EAKPWN------ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVD---VLKKANVLIAP 552 (636)
Q Consensus 489 i~-~~eil~------~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~~---iL~~rGIlviP 552 (636)
.+ -++++. .++|+++=|. .+..+.+.+...++.|..++||=-=.....++.+ ..+++|+.+.-
T Consensus 69 ~~~~~~ll~~~~~~~~~vD~V~i~t-p~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~v 141 (398)
T 3dty_A 69 YADYLSMFEQEARRADGIQAVSIAT-PNGTHYSITKAALEAGLHVVCEKPLCFTVEQAENLRELSHKHNRIVGV 141 (398)
T ss_dssp CSSHHHHHHHHTTCTTCCSEEEEES-CGGGHHHHHHHHHHTTCEEEECSCSCSCHHHHHHHHHHHHHTTCCEEE
T ss_pred eCCHHHHHhcccccCCCCCEEEECC-CcHHHHHHHHHHHHCCCeEEEeCCCcCCHHHHHHHHHHHHHcCCeEEE
Confidence 21 234443 3589998554 5667888888888899999998521112234443 44677876653
No 222
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=91.92 E-value=0.25 Score=53.80 Aligned_cols=114 Identities=11% Similarity=0.044 Sum_probs=67.7
Q ss_pred cEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeC-CCCcc
Q 006671 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD-EAKPW 495 (636)
Q Consensus 417 krVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~-~~eil 495 (636)
++|.|.|+|++|..+|..|.+.|.. |.+.|. +.++++.+.+ ..+. ++....+ .+++.
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~~G~~-V~v~dr----------~~~~~~~l~~---~~~~--------~gi~~~~s~~e~v 63 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVESRGYT-VAIYNR----------TTSKTEEVFK---EHQD--------KNLVFTKTLEEFV 63 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCC-EEEECS----------SHHHHHHHHH---HTTT--------SCEEECSSHHHHH
T ss_pred CcEEEEeeHHHHHHHHHHHHhCCCE-EEEEcC----------CHHHHHHHHH---hCcC--------CCeEEeCCHHHHH
Confidence 5899999999999999999999998 456665 3344332322 1110 0121111 12222
Q ss_pred cc--ccceEecCCCcCccchhhHHHhhh-c-CceEEEeCCCCC--CCHHHHHHHHHCCceEec
Q 006671 496 NE--RCDVAFPCASQNEIDQSDAINLVN-S-GCRILVEGSNMP--CTPEAVDVLKKANVLIAP 552 (636)
Q Consensus 496 ~~--~cDIliPcA~~n~It~enA~~l~~-~-~akiVvEgAN~P--~T~eA~~iL~~rGIlviP 552 (636)
.. +||+++-|...+....+....|.. . .-++|+..+|.. .|.+..+.+.++|+.++.
T Consensus 64 ~~l~~aDvVilavp~~~~v~~vl~~l~~~l~~g~iiId~s~~~~~~~~~l~~~l~~~g~~~v~ 126 (474)
T 2iz1_A 64 GSLEKPRRIMLMVQAGAATDATIKSLLPLLDIGDILIDGGNTHFPDTMRRNAELADSGINFIG 126 (474)
T ss_dssp HTBCSSCEEEECCCTTHHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHTTTSSCEEEE
T ss_pred hhccCCCEEEEEccCchHHHHHHHHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHCCCeEEC
Confidence 21 499999988775433333444321 1 124777888875 234445667778988763
No 223
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=91.85 E-value=0.6 Score=47.95 Aligned_cols=33 Identities=24% Similarity=0.303 Sum_probs=29.6
Q ss_pred CCCcEEEEecCccHHHHHHHHHHHCCCEEEEEe
Q 006671 414 LKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVS 446 (636)
Q Consensus 414 l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVS 446 (636)
-.|.+|+|.|.|.||..+++++...|++|+++.
T Consensus 175 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~ 207 (348)
T 3two_A 175 TKGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFA 207 (348)
T ss_dssp CTTCEEEEESCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEe
Confidence 368999999999999999999999999977654
No 224
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=91.83 E-value=0.32 Score=53.13 Aligned_cols=114 Identities=11% Similarity=0.081 Sum_probs=67.4
Q ss_pred cEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeC-CCCcc
Q 006671 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD-EAKPW 495 (636)
Q Consensus 417 krVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~-~~eil 495 (636)
++|.|.|.|++|+.+|..|.+.|.. |.+.|. +.++++.+.+. ... . .+....+ .+++.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~-V~v~dr----------~~~~~~~l~~~--~~~---g-----~gi~~~~~~~e~v 61 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFV-VCAFNR----------TVSKVDDFLAN--EAK---G-----TKVLGAHSLEEMV 61 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCC-EEEECS----------STHHHHHHHHT--TTT---T-----SSCEECSSHHHHH
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCe-EEEEeC----------CHHHHHHHHhc--ccc---C-----CCeEEeCCHHHHH
Confidence 4799999999999999999999998 456665 22333223210 100 0 0121111 12222
Q ss_pred c--cccceEecCCCcCccchhhHHHhhh-cC-ceEEEeCCCCCC--CHHHHHHHHHCCceEe
Q 006671 496 N--ERCDVAFPCASQNEIDQSDAINLVN-SG-CRILVEGSNMPC--TPEAVDVLKKANVLIA 551 (636)
Q Consensus 496 ~--~~cDIliPcA~~n~It~enA~~l~~-~~-akiVvEgAN~P~--T~eA~~iL~~rGIlvi 551 (636)
. .+||++|-|.....-..+.+..|.. .+ -++|+..+|... |.+..+.|.++|+.++
T Consensus 62 ~~l~~aDvVilaVp~~~~v~~vl~~l~~~l~~g~iII~~s~~~~~~~~~l~~~l~~~g~~~v 123 (482)
T 2pgd_A 62 SKLKKPRRIILLVKAGQAVDNFIEKLVPLLDIGDIIIDGGNSEYRDTMRRCRDLKDKGILFV 123 (482)
T ss_dssp HHBCSSCEEEECSCTTHHHHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEE
T ss_pred hhccCCCEEEEeCCChHHHHHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEe
Confidence 2 2799999888765333333333321 12 357888888763 3345567888898776
No 225
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=91.76 E-value=0.41 Score=47.77 Aligned_cols=107 Identities=20% Similarity=0.219 Sum_probs=62.2
Q ss_pred cEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeCC-CCcc
Q 006671 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE-AKPW 495 (636)
Q Consensus 417 krVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~~-~eil 495 (636)
++|.|.|.|++|..++..|.+.|..| .+.|. +.+.+..+. +. + ....+. ++.+
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V-~~~~~----------~~~~~~~~~---~~-g-----------~~~~~~~~~~~ 59 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSL-VVSDR----------NPEAIADVI---AA-G-----------AETASTAKAIA 59 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEE-EEECS----------CHHHHHHHH---HT-T-----------CEECSSHHHHH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEE-EEEeC----------CHHHHHHHH---HC-C-----------CeecCCHHHHH
Confidence 48999999999999999999999984 66665 233332221 11 1 111111 1122
Q ss_pred ccccceEecCCCcCccchhhH---HHh---hhcCceEEEeCCCCCC--CHHHHHHHHHCCceEe
Q 006671 496 NERCDVAFPCASQNEIDQSDA---INL---VNSGCRILVEGSNMPC--TPEAVDVLKKANVLIA 551 (636)
Q Consensus 496 ~~~cDIliPcA~~n~It~enA---~~l---~~~~akiVvEgAN~P~--T~eA~~iL~~rGIlvi 551 (636)
.+||+++-|........+-. +.| +..+ ++|+.-+|+.. +.+..+.+.++|+.++
T Consensus 60 -~~~D~vi~~v~~~~~~~~~~~~~~~l~~~l~~~-~~vv~~s~~~~~~~~~l~~~~~~~g~~~~ 121 (299)
T 1vpd_A 60 -EQCDVIITMLPNSPHVKEVALGENGIIEGAKPG-TVLIDMSSIAPLASREISDALKAKGVEML 121 (299)
T ss_dssp -HHCSEEEECCSSHHHHHHHHHSTTCHHHHCCTT-CEEEECSCCCHHHHHHHHHHHHTTTCEEE
T ss_pred -hCCCEEEEECCCHHHHHHHHhCcchHhhcCCCC-CEEEECCCCCHHHHHHHHHHHHHcCCeEE
Confidence 26999999887432222111 111 2224 46667777653 2344566777888765
No 226
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=91.74 E-value=0.17 Score=52.20 Aligned_cols=35 Identities=29% Similarity=0.294 Sum_probs=31.3
Q ss_pred CCCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeCC
Q 006671 413 ELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (636)
Q Consensus 413 ~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs 448 (636)
++.|+||.|.|+|++|+.+|+.|...|.+|++ .|.
T Consensus 121 ~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~-~dr 155 (303)
T 1qp8_A 121 LIQGEKVAVLGLGEIGTRVGKILAALGAQVRG-FSR 155 (303)
T ss_dssp CCTTCEEEEESCSTHHHHHHHHHHHTTCEEEE-ECS
T ss_pred CCCCCEEEEEccCHHHHHHHHHHHHCCCEEEE-ECC
Confidence 68999999999999999999999999999654 444
No 227
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=91.73 E-value=0.099 Score=47.01 Aligned_cols=32 Identities=19% Similarity=0.236 Sum_probs=30.0
Q ss_pred CcEEEEecCccHHHHHHHHHHHCCCEEEEEeCC
Q 006671 416 GLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (636)
Q Consensus 416 GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs 448 (636)
|++|.|.|.|++|+.+++.|.+.|++ |.+.|.
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~-v~v~~r 52 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYK-VTVAGR 52 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCE-EEEEES
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCE-EEEEcC
Confidence 89999999999999999999999999 888886
No 228
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=91.70 E-value=0.38 Score=51.20 Aligned_cols=117 Identities=13% Similarity=0.079 Sum_probs=70.3
Q ss_pred CCCcEEEEecCcc---HHHHHHHHHHHCC-CEEEE-EeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCcee
Q 006671 414 LKGLRCVVSGSGK---IAMHVLEKLIAYG-AIPVS-VSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKY 488 (636)
Q Consensus 414 l~GkrVaIqGfGN---VG~~aAe~L~e~G-AkVVa-VSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~ 488 (636)
++-.||.|+|+|+ +|..-+..+...+ +++|+ |+|. |.+.+..+. +..+ + |....
T Consensus 35 m~~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~----------~~~~a~~~a---~~~g-~-------~~~~~ 93 (417)
T 3v5n_A 35 QKRIRLGMVGGGSGAFIGAVHRIAARLDDHYELVAGALSS----------TPEKAEASG---RELG-L-------DPSRV 93 (417)
T ss_dssp CCCEEEEEESCC--CHHHHHHHHHHHHTSCEEEEEEECCS----------SHHHHHHHH---HHHT-C-------CGGGB
T ss_pred CCcceEEEEcCCCchHHHHHHHHHHhhCCCcEEEEEEeCC----------CHHHHHHHH---HHcC-C-------Ccccc
Confidence 3457999999999 9987777776655 78886 8887 334332221 1111 1 11111
Q ss_pred eC-CCCccc------cccceEecCCCcCccchhhHHHhhhcCceEEEeCCCCCCCHHHHHH---HHHCCceEec
Q 006671 489 YD-EAKPWN------ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDV---LKKANVLIAP 552 (636)
Q Consensus 489 i~-~~eil~------~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~~i---L~~rGIlviP 552 (636)
.+ -++++. .++|+++=|. .+..+.+.+...++.|..++||=-=.....++.++ .+++|+.+.-
T Consensus 94 ~~~~~~ll~~~~~~~~~vD~V~I~t-p~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~v 166 (417)
T 3v5n_A 94 YSDFKEMAIREAKLKNGIEAVAIVT-PNHVHYAAAKEFLKRGIHVICDKPLTSTLADAKKLKKAADESDALFVL 166 (417)
T ss_dssp CSCHHHHHHHHHHCTTCCSEEEECS-CTTSHHHHHHHHHTTTCEEEEESSSCSSHHHHHHHHHHHHHCSSCEEE
T ss_pred cCCHHHHHhcccccCCCCcEEEECC-CcHHHHHHHHHHHhCCCeEEEECCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 22 234554 3589999665 56678888888888999999994111122344443 4667776553
No 229
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=91.69 E-value=0.11 Score=51.78 Aligned_cols=35 Identities=31% Similarity=0.460 Sum_probs=31.5
Q ss_pred CCCCCcEEEEecCccHHHHHHHHHHHCCCEEEEEe
Q 006671 412 KELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVS 446 (636)
Q Consensus 412 ~~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVS 446 (636)
.+++|++|+|+|.|.||...++.|.+.|++|+-|+
T Consensus 27 l~L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVva 61 (223)
T 3dfz_A 27 LDLKGRSVLVVGGGTIATRRIKGFLQEGAAITVVA 61 (223)
T ss_dssp ECCTTCCEEEECCSHHHHHHHHHHGGGCCCEEEEC
T ss_pred EEcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEC
Confidence 47999999999999999999999999999965443
No 230
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=91.69 E-value=0.13 Score=53.73 Aligned_cols=107 Identities=17% Similarity=0.248 Sum_probs=64.8
Q ss_pred CCCCCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceee-
Q 006671 411 NKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYY- 489 (636)
Q Consensus 411 g~~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i- 489 (636)
+.++.|+||.|.|+|++|+.+|+.|...|++|++ .|. .. + +. +.+ +..+ .
T Consensus 141 ~~~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~-~d~-------~~-~--~~--~~~-------~~~~---------~~ 191 (333)
T 1j4a_A 141 GREVRDQVVGVVGTGHIGQVFMQIMEGFGAKVIT-YDI-------FR-N--PE--LEK-------KGYY---------VD 191 (333)
T ss_dssp BCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEE-ECS-------SC-C--HH--HHH-------TTCB---------CS
T ss_pred cccCCCCEEEEEccCHHHHHHHHHHHHCCCEEEE-ECC-------Cc-c--hh--HHh-------hCee---------cC
Confidence 3578999999999999999999999999999754 343 21 1 10 000 0011 1
Q ss_pred CCCCccccccceEecCCC-----cCccchhhHHHhhhcCceEEEeCCCCC-CCHHH-HHHHHHCCce
Q 006671 490 DEAKPWNERCDVAFPCAS-----QNEIDQSDAINLVNSGCRILVEGSNMP-CTPEA-VDVLKKANVL 549 (636)
Q Consensus 490 ~~~eil~~~cDIliPcA~-----~n~It~enA~~l~~~~akiVvEgAN~P-~T~eA-~~iL~~rGIl 549 (636)
+.++++ ..|||++-|.. .+.|+.+....+ +.++-+| --+-++ ++.++ .+.|++.+|.
T Consensus 192 ~l~ell-~~aDvV~l~~p~~~~t~~li~~~~l~~m-k~ga~lI-n~arg~~vd~~aL~~aL~~g~i~ 255 (333)
T 1j4a_A 192 SLDDLY-KQADVISLHVPDVPANVHMINDESIAKM-KQDVVIV-NVSRGPLVDTDAVIRGLDSGKIF 255 (333)
T ss_dssp CHHHHH-HHCSEEEECSCCCGGGTTCBSHHHHHHS-CTTEEEE-ECSCGGGBCHHHHHHHHHHTSEE
T ss_pred CHHHHH-hhCCEEEEcCCCcHHHHHHHhHHHHhhC-CCCcEEE-ECCCCcccCHHHHHHHHHhCCce
Confidence 111222 37899988765 344655544444 3355444 444444 55544 5778887775
No 231
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=91.59 E-value=0.6 Score=45.66 Aligned_cols=89 Identities=12% Similarity=0.102 Sum_probs=52.9
Q ss_pred cEEEEecCccHHHHHHHHHHHCC-CEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceee-CCCCc
Q 006671 417 LRCVVSGSGKIAMHVLEKLIAYG-AIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYY-DEAKP 494 (636)
Q Consensus 417 krVaIqGfGNVG~~aAe~L~e~G-AkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i-~~~ei 494 (636)
++|.|.|.|++|...+..|.+.| .. |.+.|. +.+.+..+. +.. +.... +..+.
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~~-v~~~~r----------~~~~~~~~~---~~~-----------g~~~~~~~~~~ 55 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQGGYR-IYIANR----------GAEKRERLE---KEL-----------GVETSATLPEL 55 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSCE-EEEECS----------SHHHHHHHH---HHT-----------CCEEESSCCCC
T ss_pred CEEEEECchHHHHHHHHHHHHCCCCe-EEEECC----------CHHHHHHHH---Hhc-----------CCEEeCCHHHH
Confidence 37999999999999999999999 77 466665 233332222 111 12222 23344
Q ss_pred cccccceEecCCCcCccchhhHHHhhhcCceEEEeCCCCC
Q 006671 495 WNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMP 534 (636)
Q Consensus 495 l~~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgAN~P 534 (636)
. +||++|-|..... ..+-...|.. +-++|+.-+|+-
T Consensus 56 ~--~~D~vi~~v~~~~-~~~v~~~l~~-~~~ivv~~~~g~ 91 (263)
T 1yqg_A 56 H--SDDVLILAVKPQD-MEAACKNIRT-NGALVLSVAAGL 91 (263)
T ss_dssp C--TTSEEEECSCHHH-HHHHHTTCCC-TTCEEEECCTTC
T ss_pred h--cCCEEEEEeCchh-HHHHHHHhcc-CCCEEEEecCCC
Confidence 4 8999999887332 2333333321 135677665543
No 232
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=91.37 E-value=0.38 Score=49.29 Aligned_cols=108 Identities=16% Similarity=0.219 Sum_probs=63.7
Q ss_pred CcEEEEecC-ccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeCCCCc
Q 006671 416 GLRCVVSGS-GKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKP 494 (636)
Q Consensus 416 GkrVaIqGf-GNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~~~ei 494 (636)
.++|+|+|+ |+.|+..++.|.+.|.++|+..+....=-...| +.-| +.. +++
T Consensus 7 ~~~VaVvGasG~~G~~~~~~l~~~g~~~v~~VnP~~~g~~i~G------------------~~vy----~sl-----~el 59 (288)
T 1oi7_A 7 ETRVLVQGITGREGQFHTKQMLTYGTKIVAGVTPGKGGMEVLG------------------VPVY----DTV-----KEA 59 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTCEETT------------------EEEE----SSH-----HHH
T ss_pred CCEEEEECCCCCHHHHHHHHHHHcCCeEEEEECCCCCCceECC------------------EEee----CCH-----HHH
Confidence 478999998 999999999999999997765554220000011 1111 111 111
Q ss_pred c-ccccceEecCCCcCccchhhHHHhhhcCceEEEeCC-CCCCCH--HHHHHHHHCCceEe
Q 006671 495 W-NERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGS-NMPCTP--EAVDVLKKANVLIA 551 (636)
Q Consensus 495 l-~~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgA-N~P~T~--eA~~iL~~rGIlvi 551 (636)
. ..++|+++-|... ....+.+...++.+++.|+..+ ..+.+. +..+..++.|+.++
T Consensus 60 ~~~~~~Dv~Ii~vp~-~~~~~~~~ea~~~Gi~~vVi~t~G~~~~~~~~l~~~a~~~gi~vi 119 (288)
T 1oi7_A 60 VAHHEVDASIIFVPA-PAAADAALEAAHAGIPLIVLITEGIPTLDMVRAVEEIKALGSRLI 119 (288)
T ss_dssp HHHSCCSEEEECCCH-HHHHHHHHHHHHTTCSEEEECCSCCCHHHHHHHHHHHHHHTCEEE
T ss_pred hhcCCCCEEEEecCH-HHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCCEEE
Confidence 1 1267888766543 3456666667778999544444 333322 45566778898554
No 233
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=91.29 E-value=0.22 Score=48.26 Aligned_cols=32 Identities=16% Similarity=0.233 Sum_probs=28.9
Q ss_pred cEEEEecCccHHHHHHHHHHHCCCEEEEEeCC
Q 006671 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (636)
Q Consensus 417 krVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs 448 (636)
++|.|.|.|++|..+|+.|.+.|..|+.+.|.
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r 55 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAAQIPAIIANSR 55 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHTTCCEEEECTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECC
Confidence 58999999999999999999999997766776
No 234
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=91.25 E-value=0.28 Score=51.87 Aligned_cols=35 Identities=23% Similarity=0.375 Sum_probs=32.2
Q ss_pred CCCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeCC
Q 006671 413 ELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (636)
Q Consensus 413 ~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs 448 (636)
++.|++|.|.|+|.+|..+++.+..+|++ |.+.|.
T Consensus 169 ~l~g~~V~ViGaG~iG~~aa~~a~~~Ga~-V~~~d~ 203 (384)
T 1l7d_A 169 TVPPARVLVFGVGVAGLQAIATAKRLGAV-VMATDV 203 (384)
T ss_dssp EECCCEEEEECCSHHHHHHHHHHHHTTCE-EEEECS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCE-EEEEeC
Confidence 57899999999999999999999999998 677776
No 235
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=91.24 E-value=0.82 Score=46.55 Aligned_cols=112 Identities=16% Similarity=0.098 Sum_probs=62.6
Q ss_pred cEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcC-CccccccccC---Cc-eeeCC
Q 006671 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQR-SLRDYSKTYA---RS-KYYDE 491 (636)
Q Consensus 417 krVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g-~l~~y~~~~p---~a-~~i~~ 491 (636)
++|.|.|.|++|..+|..|.+.|..| .+.|. +.+.+..+ ++..+ .+... ..+ .. ...+.
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V-~~~~r----------~~~~~~~~---~~~~~~~~~~~--~~~~~~~~~~~~~~ 68 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSV-LAWDI----------DAQRIKEI---QDRGAIIAEGP--GLAGTAHPDLLTSD 68 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEE-EEECS----------CHHHHHHH---HHHTSEEEESS--SCCEEECCSEEESC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEE-EEEeC----------CHHHHHHH---HhcCCeEEecc--ccccccccceecCC
Confidence 68999999999999999999999985 45565 22333222 22211 01000 000 00 11111
Q ss_pred -CCccccccceEecCCCcCccchhhHHHhh---hcCceEEEeCCC-CCCCHHHHHHHHHCC
Q 006671 492 -AKPWNERCDVAFPCASQNEIDQSDAINLV---NSGCRILVEGSN-MPCTPEAVDVLKKAN 547 (636)
Q Consensus 492 -~eil~~~cDIliPcA~~n~It~enA~~l~---~~~akiVvEgAN-~P~T~eA~~iL~~rG 547 (636)
++.+ .+||++|-|...... .+-+..+. ..++.+|.. .| .+-+.+..+.|.+.|
T Consensus 69 ~~~~~-~~~D~vi~~v~~~~~-~~~~~~l~~~l~~~~~vv~~-~~~~~~~~~~~~~l~~~~ 126 (359)
T 1bg6_A 69 IGLAV-KDADVILIVVPAIHH-ASIAANIASYISEGQLIILN-PGATGGALEFRKILRENG 126 (359)
T ss_dssp HHHHH-TTCSEEEECSCGGGH-HHHHHHHGGGCCTTCEEEES-SCCSSHHHHHHHHHHHTT
T ss_pred HHHHH-hcCCEEEEeCCchHH-HHHHHHHHHhCCCCCEEEEc-CCCchHHHHHHHHHHhcC
Confidence 1112 379999998877654 44444442 335667766 44 444445456677765
No 236
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=91.12 E-value=0.33 Score=53.01 Aligned_cols=111 Identities=11% Similarity=0.025 Sum_probs=71.2
Q ss_pred CcEEEEecC----ccHHHHHHHHHHHC--CCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceee
Q 006671 416 GLRCVVSGS----GKIAMHVLEKLIAY--GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYY 489 (636)
Q Consensus 416 GkrVaIqGf----GNVG~~aAe~L~e~--GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i 489 (636)
-.||.|+|+ |.+|...++.|.+. +++||+|+|. |.+.+..+ .+..+ + +.....
T Consensus 39 ~irvgiIG~g~~GG~~g~~h~~~l~~~~~~~~lvav~d~----------~~~~a~~~---a~~~g-~-------~~~~~~ 97 (479)
T 2nvw_A 39 PIRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNP----------TLKSSLQT---IEQLQ-L-------KHATGF 97 (479)
T ss_dssp CEEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECS----------CHHHHHHH---HHHTT-C-------TTCEEE
T ss_pred cCEEEEEcccCCCCHHHHHHHHHHHhcCCCeEEEEEEeC----------CHHHHHHH---HHHcC-C-------Ccceee
Confidence 368999999 99999888888885 7899999997 33333222 11111 1 111222
Q ss_pred C-CCCccc-cccceEecCCCcCccchhhHHHhhhcC------ceEEEeCCCCCC--C-HHHHH---HHHHCC-ceEe
Q 006671 490 D-EAKPWN-ERCDVAFPCASQNEIDQSDAINLVNSG------CRILVEGSNMPC--T-PEAVD---VLKKAN-VLIA 551 (636)
Q Consensus 490 ~-~~eil~-~~cDIliPcA~~n~It~enA~~l~~~~------akiVvEgAN~P~--T-~eA~~---iL~~rG-Ilvi 551 (636)
+ -++++. .++|+++-|.. +..+.+.+...++.| ..++||= |+ | .++.+ ..+++| +.+.
T Consensus 98 ~d~~ell~~~~vD~V~I~tp-~~~H~~~~~~al~aG~~~~~~khVl~EK---Pla~~~~ea~~l~~~a~~~g~~~~~ 170 (479)
T 2nvw_A 98 DSLESFAQYKDIDMIVVSVK-VPEHYEVVKNILEHSSQNLNLRYLYVEW---ALAASVQQAEELYSISQQRANLQTI 170 (479)
T ss_dssp SCHHHHHHCTTCSEEEECSC-HHHHHHHHHHHHHHSSSCSSCCEEEEES---SSSSSHHHHHHHHHHHHTCTTCEEE
T ss_pred CCHHHHhcCCCCCEEEEcCC-cHHHHHHHHHHHHCCCCcCCceeEEEeC---CCcCCHHHHHHHHHHHHHcCCeEEE
Confidence 2 234553 47999998875 556777777777778 7899984 53 3 33443 345678 6654
No 237
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=91.11 E-value=0.16 Score=44.27 Aligned_cols=32 Identities=22% Similarity=0.358 Sum_probs=27.1
Q ss_pred CCCcEEEEecCccHHHHHHHHHHHCCCEEEEE
Q 006671 414 LKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSV 445 (636)
Q Consensus 414 l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaV 445 (636)
+++++|+|.|.|.+|+.+++.|.+.|..|+.+
T Consensus 4 ~~~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~ 35 (144)
T 2hmt_A 4 IKNKQFAVIGLGRFGGSIVKELHRMGHEVLAV 35 (144)
T ss_dssp --CCSEEEECCSHHHHHHHHHHHHTTCCCEEE
T ss_pred CcCCcEEEECCCHHHHHHHHHHHHCCCEEEEE
Confidence 56788999999999999999999999986544
No 238
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=90.92 E-value=1 Score=43.05 Aligned_cols=31 Identities=10% Similarity=0.201 Sum_probs=26.7
Q ss_pred cEEEEecCccHHHHHHHHHHHCCCEEEEEeCC
Q 006671 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (636)
Q Consensus 417 krVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs 448 (636)
++|+|.|+|.+|+.+|+.|.+.|..|+.+ |.
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~~v~vi-d~ 31 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKYGVVII-NK 31 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEE-ES
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEE-EC
Confidence 36999999999999999999999986644 43
No 239
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=90.66 E-value=0.21 Score=49.41 Aligned_cols=111 Identities=12% Similarity=0.164 Sum_probs=51.4
Q ss_pred CCCCCHHHHHHH--HHHHHHHHHhhcCCCCcccCCCCCCChhHHHHHHHHhhhhhCCCCccccCcccccCCCCCCCCcch
Q 006671 319 PKGKSDNEIMRF--CQSFMNEIHRYLGPDKDLPSEEMGVGTREMGYLFGQYRRLAGHFQGSFTGPRIFWSGSSLRTEATG 396 (636)
Q Consensus 319 P~~~S~~El~r~--~r~f~~eL~~~IGp~~DVpA~DiGt~~rem~~m~~~y~~l~g~~~g~vTGKp~~~GGs~~r~eATG 396 (636)
++..++.-+.|+ +-+|..+|..- +. --++.+|++-..+-.+..-. |++++=|..|.. --|
T Consensus 5 ~~~i~~~~~~Rl~~Y~r~l~~l~~~---g~------~~iss~~l~~~~~~~~~~iR--------kdls~fg~~G~~-g~g 66 (215)
T 2vt3_A 5 QSKIPQATAKRLPLYYRFLKNLHAS---GK------QRVSSAELSDAVKVDSATIR--------RDFSYFGALGKK-GYG 66 (215)
T ss_dssp ------CHHHHHHHHHHHHHHHHHT---TC------CEECHHHHHHHHCCCHHHHH--------HHHHHTTCCC------
T ss_pred cCcCCHHHHHHHHHHHHHHHHHHHc---CC------cEECHHHHHHHhCCCHHHee--------chHHHHHHhcCC-cce
Confidence 344556667775 55666666632 11 12577777766532211100 112211222210 113
Q ss_pred hHHHHHHHHHHHHhCCCCCCcEEEEecCccHHHHHHHH--HHHCCCEEEEEeCC
Q 006671 397 YGLVFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEK--LIAYGAIPVSVSDA 448 (636)
Q Consensus 397 ~GV~~~~~~~l~~~g~~l~GkrVaIqGfGNVG~~aAe~--L~e~GAkVVaVSDs 448 (636)
|=|.+-.++.-+.+|.+ ...+|+|.|.|++|..+++. +...|.++|++.|.
T Consensus 67 Y~v~~L~~~~~~~lg~~-~~~rV~IIGAG~~G~~La~~~~~~~~g~~iVg~~D~ 119 (215)
T 2vt3_A 67 YNVDYLLSFFRKTLDQD-EMTDVILIGVGNLGTAFLHYNFTKNNNTKISMAFDI 119 (215)
T ss_dssp EEHHHHHHHHHHHHHHC----CEEEECCSHHHHHHHHCC------CCEEEEEES
T ss_pred EEhHHHHHHHHHHhCcC-CCCEEEEEccCHHHHHHHHHHhcccCCcEEEEEEeC
Confidence 33422223322223322 23689999999999999994 34568999999997
No 240
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=90.54 E-value=0.24 Score=44.83 Aligned_cols=33 Identities=18% Similarity=0.270 Sum_probs=28.2
Q ss_pred CCcEEEEecCccHHHHHHHHHHHCCCEEEEEeC
Q 006671 415 KGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSD 447 (636)
Q Consensus 415 ~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSD 447 (636)
..++|+|.|+|.||+.+++.|.+.|..|+.|..
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~ 34 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLNQRGQNVTVISN 34 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEC
Confidence 356899999999999999999999999766543
No 241
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=90.43 E-value=0.41 Score=50.95 Aligned_cols=123 Identities=13% Similarity=0.139 Sum_probs=66.9
Q ss_pred cEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCc-----cccccccC-CceeeC
Q 006671 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSL-----RDYSKTYA-RSKYYD 490 (636)
Q Consensus 417 krVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l-----~~y~~~~p-~a~~i~ 490 (636)
++|+|.|.|.||..+|..|.+ |..|+ +.|. |.++++.+ ++....+ .++....+ .....+
T Consensus 1 MkI~VIG~G~vG~~~A~~La~-G~~V~-~~d~----------~~~~~~~l---~~~~~~i~e~~l~~~~~~~~~~l~~t~ 65 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL-QNEVT-IVDI----------LPSKVDKI---NNGLSPIQDEYIEYYLKSKQLSIKATL 65 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-TSEEE-EECS----------CHHHHHHH---HTTCCSSCCHHHHHHHHHSCCCEEEES
T ss_pred CEEEEECCCHHHHHHHHHHhC-CCEEE-EEEC----------CHHHHHHH---HcCCCCcCCCCHHHHHHhccCcEEEeC
Confidence 379999999999999999998 98854 4464 22332212 1111111 11100000 011111
Q ss_pred C-CCccccccceEecCCCcCc----------cchhhHHHh--hhcCceEEEeCCCCCCCH-HHHHHHHHCCceEecccc
Q 006671 491 E-AKPWNERCDVAFPCASQNE----------IDQSDAINL--VNSGCRILVEGSNMPCTP-EAVDVLKKANVLIAPAMA 555 (636)
Q Consensus 491 ~-~eil~~~cDIliPcA~~n~----------It~enA~~l--~~~~akiVvEgAN~P~T~-eA~~iL~~rGIlviPD~~ 555 (636)
. .+. -.+||++|-|..... ...+-+..| +..++-+|.+..|.|-|. +..+.+.+..|.+.|.++
T Consensus 66 ~~~~~-~~~aDvviiavpt~~~~~~~~~dl~~v~~v~~~i~~l~~~~iVV~~ST~~~g~~~~l~~~~~~~~v~~~Pe~~ 143 (402)
T 1dlj_A 66 DSKAA-YKEAELVIIATPTNYNSRINYFDTQHVETVIKEVLSVNSHATLIIKSTIPIGFITEMRQKFQTDRIIFSPEFL 143 (402)
T ss_dssp CHHHH-HHHCSEEEECCCCCEETTTTEECCHHHHHHHHHHHHHCSSCEEEECSCCCTTHHHHHHHHTTCSCEEECCCCC
T ss_pred CHHHH-hcCCCEEEEecCCCcccCCCCccHHHHHHHHHHHHhhCCCCEEEEeCCCCccHHHHHHHHhCCCeEEECCccc
Confidence 1 011 137899988876552 112222222 233566677799988554 444556566788899765
No 242
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=90.22 E-value=0.45 Score=46.60 Aligned_cols=101 Identities=10% Similarity=0.077 Sum_probs=58.2
Q ss_pred cEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeC-CCCcc
Q 006671 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD-EAKPW 495 (636)
Q Consensus 417 krVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~-~~eil 495 (636)
++|.|.|+|++|...++.|.+.|.. |.+.|. +.+.+..+. +..+ ....+ .++.+
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g~~-v~~~~~----------~~~~~~~~~---~~~g-----------~~~~~~~~~~~ 58 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTPHE-LIISGS----------SLERSKEIA---EQLA-----------LPYAMSHQDLI 58 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSSCE-EEEECS----------SHHHHHHHH---HHHT-----------CCBCSSHHHHH
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCe-EEEECC----------CHHHHHHHH---HHcC-----------CEeeCCHHHHH
Confidence 5899999999999999999999975 577775 233332221 1111 11111 11222
Q ss_pred ccccceEecCCCcCccchhhHHHhhhcCceEEEeCCCCCCCHHHHHHHHHCC
Q 006671 496 NERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKAN 547 (636)
Q Consensus 496 ~~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~~iL~~rG 547 (636)
.+||+++-|.... ...+-+..+ ..+ ++|++-.++-...+..+.+ .++
T Consensus 59 -~~~D~Vi~~v~~~-~~~~v~~~l-~~~-~~vv~~~~~~~~~~l~~~~-~~~ 105 (259)
T 2ahr_A 59 -DQVDLVILGIKPQ-LFETVLKPL-HFK-QPIISMAAGISLQRLATFV-GQD 105 (259)
T ss_dssp -HTCSEEEECSCGG-GHHHHHTTS-CCC-SCEEECCTTCCHHHHHHHH-CTT
T ss_pred -hcCCEEEEEeCcH-hHHHHHHHh-ccC-CEEEEeCCCCCHHHHHHhc-CCC
Confidence 2799999988733 334444443 223 4788776654333344444 345
No 243
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=90.17 E-value=0.53 Score=50.14 Aligned_cols=122 Identities=13% Similarity=0.066 Sum_probs=68.5
Q ss_pred cEEEEecCccHHHHHHHHHHHCCC--EEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcC--CccccccccCCceeeCC-
Q 006671 417 LRCVVSGSGKIAMHVLEKLIAYGA--IPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQR--SLRDYSKTYARSKYYDE- 491 (636)
Q Consensus 417 krVaIqGfGNVG~~aAe~L~e~GA--kVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g--~l~~y~~~~p~a~~i~~- 491 (636)
++|+|.|.|.+|+.+++.|.+.|. ..|.++|. +.+++..+.+.....+ .+... .. -+++
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r----------~~~~~~~la~~l~~~~~~~~~~~-----~~-D~~d~ 65 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAMNREVFSHITLASR----------TLSKCQEIAQSIKAKGYGEIDIT-----TV-DADSI 65 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEES----------CHHHHHHHHHHHHHTTCCCCEEE-----EC-CTTCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEEEEEEC----------CHHHHHHHHHHhhhhcCCceEEE-----Ee-cCCCH
Confidence 489999999999999999999984 24677776 3344333322111110 11100 00 0011
Q ss_pred C---Cccc-cccceEecCCCcCccchhhHHHhhhcCceEEEeCCCC--CCC--------HHHHHHHHHCCceEeccccc
Q 006671 492 A---KPWN-ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNM--PCT--------PEAVDVLKKANVLIAPAMAA 556 (636)
Q Consensus 492 ~---eil~-~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgAN~--P~T--------~eA~~iL~~rGIlviPD~~a 556 (636)
+ +++. .++|++|-||.... +...+...++.++++|- -++. |.. .+..+..+++|+.+++..-.
T Consensus 66 ~~l~~~l~~~~~DvVin~ag~~~-~~~v~~a~l~~g~~vvD-~a~~~~~~~~~~~~~~~~~l~~~a~~aG~~~i~g~G~ 142 (405)
T 4ina_A 66 EELVALINEVKPQIVLNIALPYQ-DLTIMEACLRTGVPYLD-TANYEHPDLAKFEYKEQWAFHDRYKEKGVMALLGSGF 142 (405)
T ss_dssp HHHHHHHHHHCCSEEEECSCGGG-HHHHHHHHHHHTCCEEE-SSCCBCTTCSCBCSHHHHTTHHHHHHHTCEEEECCBT
T ss_pred HHHHHHHHhhCCCEEEECCCccc-ChHHHHHHHHhCCCEEE-ecCCCCcccchhhhHHHHHHHHHHHHhCCEEEEcCCC
Confidence 1 1222 25899999986542 44444555567888774 3332 211 14456677888887765543
No 244
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=90.16 E-value=0.67 Score=48.58 Aligned_cols=100 Identities=14% Similarity=0.163 Sum_probs=59.0
Q ss_pred cEEEEec-CccHHHHHHHHHHHCC-CEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCcc-----ccccccCCceee
Q 006671 417 LRCVVSG-SGKIAMHVLEKLIAYG-AIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLR-----DYSKTYARSKYY 489 (636)
Q Consensus 417 krVaIqG-fGNVG~~aAe~L~e~G-AkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~-----~y~~~~p~a~~i 489 (636)
.+|+|.| +|.+|+.+++.|.+.. ..|+++.++. ...|-.++.+ .+.+. .-.... .....
T Consensus 9 ~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s~----~~~g~~~~~~---------~~~~~~~~~~~~~~~~-~~~~~ 74 (354)
T 1ys4_A 9 IKVGVLGATGSVGQRFVQLLADHPMFELTALAASE----RSAGKKYKDA---------CYWFQDRDIPENIKDM-VVIPT 74 (354)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECT----TTTTSBHHHH---------SCCCCSSCCCHHHHTC-BCEES
T ss_pred ceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEccc----ccccccHHHh---------cccccccccccCceee-EEEeC
Confidence 5899999 9999999999998764 6888887531 1122222111 01000 000000 01111
Q ss_pred CCCCccccccceEecCCCcCccchhhHHHhhhcCceEEEeCC
Q 006671 490 DEAKPWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGS 531 (636)
Q Consensus 490 ~~~eil~~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgA 531 (636)
+.+++...+||+++-|+. ...+.+.+..+.+.++++|--++
T Consensus 75 ~~~~~~~~~~DvV~~atp-~~~~~~~a~~~~~aG~~VId~s~ 115 (354)
T 1ys4_A 75 DPKHEEFEDVDIVFSALP-SDLAKKFEPEFAKEGKLIFSNAS 115 (354)
T ss_dssp CTTSGGGTTCCEEEECCC-HHHHHHHHHHHHHTTCEEEECCS
T ss_pred CHHHHhcCCCCEEEECCC-chHHHHHHHHHHHCCCEEEECCc
Confidence 233322348999998874 45677788888888999776544
No 245
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=89.97 E-value=2.1 Score=43.90 Aligned_cols=35 Identities=23% Similarity=0.297 Sum_probs=30.8
Q ss_pred CCCCcEEEEecC-ccHHHHHHHHHHHCCCEEEEEeC
Q 006671 413 ELKGLRCVVSGS-GKIAMHVLEKLIAYGAIPVSVSD 447 (636)
Q Consensus 413 ~l~GkrVaIqGf-GNVG~~aAe~L~e~GAkVVaVSD 447 (636)
--.|.+|+|.|. |.||..+++.+...|++|+++..
T Consensus 157 ~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~ 192 (342)
T 4eye_A 157 LRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVN 192 (342)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeC
Confidence 346899999997 99999999999999999877654
No 246
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=89.93 E-value=1.5 Score=45.29 Aligned_cols=34 Identities=35% Similarity=0.396 Sum_probs=30.2
Q ss_pred CCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeC
Q 006671 414 LKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSD 447 (636)
Q Consensus 414 l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSD 447 (636)
-.|.+|+|.|.|.||..+++.+...|++|+++.-
T Consensus 188 ~~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~ 221 (363)
T 3uog_A 188 RAGDRVVVQGTGGVALFGLQIAKATGAEVIVTSS 221 (363)
T ss_dssp CTTCEEEEESSBHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEec
Confidence 4689999999999999999999999999877643
No 247
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=89.73 E-value=1.2 Score=45.92 Aligned_cols=34 Identities=18% Similarity=0.072 Sum_probs=28.6
Q ss_pred CCCcEEEEecCccHHHHHHHHHHHCCC--EEEEEeCC
Q 006671 414 LKGLRCVVSGSGKIAMHVLEKLIAYGA--IPVSVSDA 448 (636)
Q Consensus 414 l~GkrVaIqGfGNVG~~aAe~L~e~GA--kVVaVSDs 448 (636)
+.-++|.|+|+|++|..+|+.|.+.|. .| .+.|.
T Consensus 31 ~~~~kI~IIG~G~mG~slA~~l~~~G~~~~V-~~~dr 66 (314)
T 3ggo_A 31 LSMQNVLIVGVGFMGGSFAKSLRRSGFKGKI-YGYDI 66 (314)
T ss_dssp CSCSEEEEESCSHHHHHHHHHHHHTTCCSEE-EEECS
T ss_pred cCCCEEEEEeeCHHHHHHHHHHHhCCCCCEE-EEEEC
Confidence 345799999999999999999999998 64 45565
No 248
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=89.71 E-value=0.6 Score=48.67 Aligned_cols=52 Identities=29% Similarity=0.375 Sum_probs=43.9
Q ss_pred CCcchhHHHHHHHHHHHHhCCCCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEeCC
Q 006671 392 TEATGYGLVFFAQLILADMNKELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSDA 448 (636)
Q Consensus 392 ~eATG~GV~~~~~~~l~~~g~~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVSDs 448 (636)
...|-+|+. ++|++.+.+++||+++|.| +.-||.-+|.+|.+.+|. |+++.+
T Consensus 159 ~PcTp~gv~----~lL~~~~i~l~Gk~vvViGRS~iVGkPla~LL~~~~AT-VTi~Hs 211 (303)
T 4b4u_A 159 GSATPAGIM----TILKENNIEIAGKHAVVVGRSAILGKPMAMMLLQANAT-VTICHS 211 (303)
T ss_dssp CCHHHHHHH----HHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCE-EEEECT
T ss_pred cCccHHHHH----HHHHHHCCCCCCCEEEEEeccccccchHHHHHHhcCCE-EEEecC
Confidence 357888765 5566779999999999999 677899999999999999 677776
No 249
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=89.67 E-value=8 Score=39.38 Aligned_cols=98 Identities=11% Similarity=0.094 Sum_probs=55.0
Q ss_pred CcEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccC-CceeeCC-CC
Q 006671 416 GLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYA-RSKYYDE-AK 493 (636)
Q Consensus 416 GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p-~a~~i~~-~e 493 (636)
..+|.|.|.|++|..+|..|.+.|..| .+.|. +.++++.+ .+....+ |..... +....++ .+
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~G~~V-~~~~r----------~~~~~~~l---~~~g~~~--~~~~~~~~~~~~~~~~~ 77 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHENGEEV-ILWAR----------RKEIVDLI---NVSHTSP--YVEESKITVRATNDLEE 77 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEE-EEECS----------SHHHHHHH---HHHSCBT--TBTTCCCCSEEESCGGG
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCeE-EEEeC----------CHHHHHHH---HHhCCcc--cCCCCeeeEEEeCCHHH
Confidence 468999999999999999999999984 56654 22333323 2221111 100000 1222222 22
Q ss_pred ccccccceEecCCCcCccchhhHHHhhhcCceEEEeCCCC
Q 006671 494 PWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNM 533 (636)
Q Consensus 494 il~~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgAN~ 533 (636)
-.++|++|-|-.. ....+-+..|.. .-++|+--+|+
T Consensus 78 --~~~aDvVil~vk~-~~~~~v~~~l~~-~~~~vv~~~nG 113 (335)
T 1z82_A 78 --IKKEDILVIAIPV-QYIREHLLRLPV-KPSMVLNLSKG 113 (335)
T ss_dssp --CCTTEEEEECSCG-GGHHHHHTTCSS-CCSEEEECCCC
T ss_pred --hcCCCEEEEECCH-HHHHHHHHHhCc-CCCEEEEEeCC
Confidence 2478999988764 333333333322 23577778885
No 250
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=89.61 E-value=0.66 Score=46.20 Aligned_cols=31 Identities=16% Similarity=0.201 Sum_probs=26.6
Q ss_pred cEEEEecCccHHHHHHHHHHHCCCEEEEEeCC
Q 006671 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (636)
Q Consensus 417 krVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs 448 (636)
++|.|.|+|++|..+++.|.+.|..| .+.|.
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~V-~~~~~ 31 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMKHGYPL-IIYDV 31 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHHTTCCE-EEECS
T ss_pred CeEEEEeccHHHHHHHHHHHHCCCEE-EEEeC
Confidence 36899999999999999999999884 46665
No 251
>3ids_C GAPDH, glyceraldehyde-3-phosphate dehydrogenase, glycoso; irreversible inhibitor, protein-ligand complex,X-RAY, glycol NAD, oxireductase; HET: NAD; 1.80A {Trypanosoma cruzi} PDB: 1ml3_A* 1qxs_C* 3dmt_A* 1k3t_A* 2x0n_A* 1gga_O* 1i32_A* 1a7k_A* 1i33_A* 1gyp_A* 1gyq_A*
Probab=89.45 E-value=0.95 Score=48.22 Aligned_cols=103 Identities=16% Similarity=0.202 Sum_probs=64.3
Q ss_pred cEEEEecCccHHHHHHHHHHH----C-CCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccc---------
Q 006671 417 LRCVVSGSGKIAMHVLEKLIA----Y-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKT--------- 482 (636)
Q Consensus 417 krVaIqGfGNVG~~aAe~L~e----~-GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~--------- 482 (636)
.||.|-|||-+|+.+.+.|.+ . ...||+|.|. -.|.+.+..|+++-...|++...++.
T Consensus 3 ~kv~INGFGrIGr~v~Ra~~~~~~~~~~~~vvaINd~--------~~d~~~~a~llkyDS~hG~f~~~v~~~~~~~~~~~ 74 (359)
T 3ids_C 3 IKVGINGFGRIGRMVFQALCEDGLLGTEIDVVAVVDM--------NTDAEYFAYQMRYDTVHGKFKYEVTTTKSSPSVAK 74 (359)
T ss_dssp EEEEEECTTHHHHHHHHHHHHTTCBTTTEEEEEEECS--------SCCHHHHHHHHHEETTTEECSSCEEEECSCTTSSS
T ss_pred eEEEEECCChHHHHHHHHhHHHHhcCCCcEEEEEecC--------CCCHHHHHHHhcccCCCCCEeeEEEecccccccCC
Confidence 489999999999999998433 2 4689999984 24677666665553333433221111
Q ss_pred -----cCC--ceeeC----CCC-cc-ccccceEecCCCcCccchhhHHHhhhcCce-EEE
Q 006671 483 -----YAR--SKYYD----EAK-PW-NERCDVAFPCASQNEIDQSDAINLVNSGCR-ILV 528 (636)
Q Consensus 483 -----~p~--a~~i~----~~e-il-~~~cDIliPcA~~n~It~enA~~l~~~~ak-iVv 528 (636)
+.+ .+... +++ .| +..+|+++.|+ +.-.+.+-|+.-++.||| +|+
T Consensus 75 ~~~l~inGk~I~v~~~e~dp~~i~w~~~gvDiVlesT-G~f~s~e~A~~hl~aGAkkViI 133 (359)
T 3ids_C 75 DDTLVVNGHRILCVKAQRNPADLPWGKLGVEYVIEST-GLFTAKAAAEGHLRGGARKVVI 133 (359)
T ss_dssp CCEEEETTEEEEECCCCSSTTTSCHHHHTCCEEEECS-SSCCBHHHHTHHHHTTCCEEEE
T ss_pred CCEEEECCEEEEEEEccCCcccCCccccCccEEEEec-cccCCHHHHHHHHHcCCCEEEE
Confidence 111 11121 222 35 46899999997 455678888877788886 444
No 252
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=89.34 E-value=0.33 Score=47.79 Aligned_cols=38 Identities=18% Similarity=0.327 Sum_probs=28.8
Q ss_pred hCCCCCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeCC
Q 006671 410 MNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (636)
Q Consensus 410 ~g~~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs 448 (636)
...++.+++|.|.|+|++|..+|+.|.+.|..| .+.|.
T Consensus 13 ~~~~~~~~kIgiIG~G~mG~alA~~L~~~G~~V-~~~~r 50 (245)
T 3dtt_A 13 ENLYFQGMKIAVLGTGTVGRTMAGALADLGHEV-TIGTR 50 (245)
T ss_dssp ------CCEEEEECCSHHHHHHHHHHHHTTCEE-EEEES
T ss_pred cccccCCCeEEEECCCHHHHHHHHHHHHCCCEE-EEEeC
Confidence 346788999999999999999999999999985 45565
No 253
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=89.15 E-value=0.59 Score=47.27 Aligned_cols=31 Identities=16% Similarity=0.239 Sum_probs=27.3
Q ss_pred cEEEEecCccHHHHHHHHHHHCCCEEEEEeCC
Q 006671 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (636)
Q Consensus 417 krVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs 448 (636)
++|.|.|+|++|..+|..|.+.|..| .+.|.
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g~~V-~~~~~ 61 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMGHTV-TVWNR 61 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCE-EEECS
T ss_pred CeEEEEcccHHHHHHHHHHHhCCCEE-EEEeC
Confidence 68999999999999999999999884 56665
No 254
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=89.05 E-value=1.3 Score=44.22 Aligned_cols=90 Identities=14% Similarity=0.092 Sum_probs=54.9
Q ss_pred cEEEEecC-ccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeCCCCcc
Q 006671 417 LRCVVSGS-GKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKPW 495 (636)
Q Consensus 417 krVaIqGf-GNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~~~eil 495 (636)
++|.|.|+ |++|..+|+.|.+.|..|+ +.|. +.+.+..+.+ .+ + ...+..+.+
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~-~~~r----------~~~~~~~~~~----~g-~----------~~~~~~~~~ 65 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLA-AIEI----------APEGRDRLQG----MG-I----------PLTDGDGWI 65 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEE-EECC----------SHHHHHHHHH----TT-C----------CCCCSSGGG
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEE-EEEC----------CHHHHHHHHh----cC-C----------CcCCHHHHh
Confidence 58999999 9999999999999999854 6665 2333322221 11 1 111222222
Q ss_pred ccccceEecCCCcCccchhhHHHhhh--cCceEEEeCCCCC
Q 006671 496 NERCDVAFPCASQNEIDQSDAINLVN--SGCRILVEGSNMP 534 (636)
Q Consensus 496 ~~~cDIliPcA~~n~It~enA~~l~~--~~akiVvEgAN~P 534 (636)
.+||++|-|.....+ .+-...|.. ..-++|+..++..
T Consensus 66 -~~aDvVi~av~~~~~-~~v~~~l~~~l~~~~ivv~~s~~~ 104 (286)
T 3c24_A 66 -DEADVVVLALPDNII-EKVAEDIVPRVRPGTIVLILDAAA 104 (286)
T ss_dssp -GTCSEEEECSCHHHH-HHHHHHHGGGSCTTCEEEESCSHH
T ss_pred -cCCCEEEEcCCchHH-HHHHHHHHHhCCCCCEEEECCCCc
Confidence 379999999877663 444444422 1234666677754
No 255
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=88.86 E-value=0.45 Score=47.81 Aligned_cols=31 Identities=16% Similarity=0.159 Sum_probs=27.5
Q ss_pred cEEEEecCccHHHHHHHHHHHCCCEEEEEeCC
Q 006671 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (636)
Q Consensus 417 krVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs 448 (636)
++|+|.|.|++|..+|..|...|..| .+.|.
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V-~l~d~ 35 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAV-TAYDI 35 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEE-EEECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeE-EEEeC
Confidence 68999999999999999999999985 55665
No 256
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=88.73 E-value=1.6 Score=47.42 Aligned_cols=31 Identities=23% Similarity=0.225 Sum_probs=27.4
Q ss_pred cEEEEecCccHHHHHHHHHHHCCCEEEEEeCC
Q 006671 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (636)
Q Consensus 417 krVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs 448 (636)
++|+|.|.|.||..+|..|.+.|..|+ +.|.
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~-~~D~ 33 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVR-CIDT 33 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEE-EECS
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEE-EEEC
Confidence 589999999999999999999999865 5564
No 257
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=88.71 E-value=0.43 Score=45.61 Aligned_cols=36 Identities=33% Similarity=0.541 Sum_probs=29.1
Q ss_pred CCCCCcEEEEecC-ccHHHHHHHHHHHCCCEEEEEeC
Q 006671 412 KELKGLRCVVSGS-GKIAMHVLEKLIAYGAIPVSVSD 447 (636)
Q Consensus 412 ~~l~GkrVaIqGf-GNVG~~aAe~L~e~GAkVVaVSD 447 (636)
.+++|++|+|.|. |.+|+++++.|.+.|++|++++-
T Consensus 17 ~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R 53 (236)
T 3e8x_A 17 LYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVR 53 (236)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred cCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEEC
Confidence 4688999999995 99999999999999999877654
No 258
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=88.51 E-value=0.44 Score=50.35 Aligned_cols=35 Identities=23% Similarity=0.249 Sum_probs=30.8
Q ss_pred CCCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeCC
Q 006671 413 ELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (636)
Q Consensus 413 ~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs 448 (636)
++.|++|.|.|+|.+|..+|+.+...|++| .+.|.
T Consensus 165 ~l~g~~V~ViG~G~iG~~~a~~a~~~Ga~V-~~~d~ 199 (377)
T 2vhw_A 165 GVEPADVVVIGAGTAGYNAARIANGMGATV-TVLDI 199 (377)
T ss_dssp TBCCCEEEEECCSHHHHHHHHHHHHTTCEE-EEEES
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCEE-EEEeC
Confidence 578999999999999999999999999985 45554
No 259
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=88.50 E-value=4.5 Score=43.84 Aligned_cols=33 Identities=21% Similarity=0.192 Sum_probs=27.5
Q ss_pred CCcEEEEecCccHHHHHHHHHHHCCCEEEEEeCC
Q 006671 415 KGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (636)
Q Consensus 415 ~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs 448 (636)
.|.+..|.|.|.||..+|..|.+.|..|+ +-|.
T Consensus 10 ~~~~~~ViGlGyvGlp~A~~La~~G~~V~-~~D~ 42 (431)
T 3ojo_A 10 HGSKLTVVGLGYIGLPTSIMFAKHGVDVL-GVDI 42 (431)
T ss_dssp --CEEEEECCSTTHHHHHHHHHHTTCEEE-EECS
T ss_pred cCCccEEEeeCHHHHHHHHHHHHCCCEEE-EEEC
Confidence 57899999999999999999999999965 4464
No 260
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=88.46 E-value=0.25 Score=50.74 Aligned_cols=112 Identities=14% Similarity=0.124 Sum_probs=69.4
Q ss_pred cEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCC-CCCCHHHHHHHHHHHhhcCCccccccccCCceeeCC-CCc
Q 006671 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDE-DGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE-AKP 494 (636)
Q Consensus 417 krVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~Iydp-dGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~~-~ei 494 (636)
.||.|+|+|.+|...++.| ..+++|++|+|. ++ +-. +++ .+...+.+ + +.+..++ +++
T Consensus 3 ~rvgiiG~G~~~~~~~~~l-~~~~~lvav~d~-----~~~~~~--~~~---~~~~~~~~-~--------~~~~~~~~~~l 62 (337)
T 3ip3_A 3 LKICVIGSSGHFRYALEGL-DEECSITGIAPG-----VPEEDL--SKL---EKAISEMN-I--------KPKKYNNWWEM 62 (337)
T ss_dssp EEEEEECSSSCHHHHHTTC-CTTEEEEEEECS-----STTCCC--HHH---HHHHHTTT-C--------CCEECSSHHHH
T ss_pred eEEEEEccchhHHHHHHhc-CCCcEEEEEecC-----CchhhH--HHH---HHHHHHcC-C--------CCcccCCHHHH
Confidence 5899999999998777777 778999999997 44 221 121 11111111 1 1122222 445
Q ss_pred cc-cccceEecCCCcCccchhhHHHhhhcCceEEEeCCCCCCCHHHHHHH---HHCCce
Q 006671 495 WN-ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVL---KKANVL 549 (636)
Q Consensus 495 l~-~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~~iL---~~rGIl 549 (636)
+. .++|+++-|. .+..+.+.+...++.|..++||=-=.....|+.+++ +++|+.
T Consensus 63 l~~~~vD~V~I~t-p~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~ 120 (337)
T 3ip3_A 63 LEKEKPDILVINT-VFSLNGKILLEALERKIHAFVEKPIATTFEDLEKIRSVYQKVRNE 120 (337)
T ss_dssp HHHHCCSEEEECS-SHHHHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTTT
T ss_pred hcCCCCCEEEEeC-CcchHHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHhCCc
Confidence 54 4789998765 566778888888888999999862111223555443 566754
No 261
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=88.45 E-value=1.3 Score=46.88 Aligned_cols=106 Identities=12% Similarity=0.164 Sum_probs=64.1
Q ss_pred CcEEEEecCccHHHHHHHHHHHC--CCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeCC-C
Q 006671 416 GLRCVVSGSGKIAMHVLEKLIAY--GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE-A 492 (636)
Q Consensus 416 GkrVaIqGfGNVG~~aAe~L~e~--GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~~-~ 492 (636)
-.||+|.|.| .|+.-++.+.+. ++++|+|+|. + .++.. +..++. +...+++ +
T Consensus 7 ~~rv~VvG~G-~g~~h~~a~~~~~~~~elvav~~~-----~-----~~~a~---~~a~~~-----------gv~~~~~~~ 61 (372)
T 4gmf_A 7 KQRVLIVGAK-FGEMYLNAFMQPPEGLELVGLLAQ-----G-----SARSR---ELAHAF-----------GIPLYTSPE 61 (372)
T ss_dssp CEEEEEECST-TTHHHHHTTSSCCTTEEEEEEECC-----S-----SHHHH---HHHHHT-----------TCCEESSGG
T ss_pred CCEEEEEehH-HHHHHHHHHHhCCCCeEEEEEECC-----C-----HHHHH---HHHHHh-----------CCCEECCHH
Confidence 4799999999 688767766654 6899999997 2 23322 121211 2222222 3
Q ss_pred CccccccceEecCCCcCccc----hhhHHHhhhcCceEEEeCCCCCCCH-HHHHHH---HHCCceEe
Q 006671 493 KPWNERCDVAFPCASQNEID----QSDAINLVNSGCRILVEGSNMPCTP-EAVDVL---KKANVLIA 551 (636)
Q Consensus 493 eil~~~cDIliPcA~~n~It----~enA~~l~~~~akiVvEgAN~P~T~-eA~~iL---~~rGIlvi 551 (636)
++++ ++|+.+=|.. +..+ .+-|...++.|..++||= |+|. |+++++ +++|+.+.
T Consensus 62 ~l~~-~~D~v~i~~p-~~~h~~~~~~~a~~al~aGkhVl~EK---Pl~~~ea~~l~~~A~~~g~~~~ 123 (372)
T 4gmf_A 62 QITG-MPDIACIVVR-STVAGGAGTQLARHFLARGVHVIQEH---PLHPDDISSLQTLAQEQGCCYW 123 (372)
T ss_dssp GCCS-CCSEEEECCC---CTTSHHHHHHHHHHHTTCEEEEES---CCCHHHHHHHHHHHHHHTCCEE
T ss_pred HHhc-CCCEEEEECC-CcccchhHHHHHHHHHHcCCcEEEec---CCCHHHHHHHHHHHHHcCCEEE
Confidence 4443 5677665443 3333 566777778899999995 6664 454443 57777665
No 262
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=88.43 E-value=0.42 Score=47.54 Aligned_cols=107 Identities=12% Similarity=0.021 Sum_probs=60.5
Q ss_pred cEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeC-CCCcc
Q 006671 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD-EAKPW 495 (636)
Q Consensus 417 krVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~-~~eil 495 (636)
++|.|.|+|++|...|+.|.+.|..|+ +.| + ++-+ ++ +. +. + + ...+ .++.+
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~-~~~-~-----~~~~--~~---~~---~~-g-~----------~~~~~~~~~~ 56 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARAGHQLH-VTT-I-----GPVA--DE---LL---SL-G-A----------VNVETARQVT 56 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHTTCEEE-ECC-S-----SCCC--HH---HH---TT-T-C----------BCCSSHHHHH
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEE-EEc-C-----HHHH--HH---HH---Hc-C-C----------cccCCHHHHH
Confidence 589999999999999999999999864 554 3 2221 11 11 11 1 1 1111 11122
Q ss_pred ccccceEecCCCcCccchhhHH---Hhhh--cCceEEEeCCCCC-C-CHHHHHHHHHCCceEe
Q 006671 496 NERCDVAFPCASQNEIDQSDAI---NLVN--SGCRILVEGSNMP-C-TPEAVDVLKKANVLIA 551 (636)
Q Consensus 496 ~~~cDIliPcA~~n~It~enA~---~l~~--~~akiVvEgAN~P-~-T~eA~~iL~~rGIlvi 551 (636)
.+||+++-|........+-.. .+.. ..-++|+.-+|+. . +.+..+.+.++|+.++
T Consensus 57 -~~~D~vi~~vp~~~~~~~v~~~~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~~~ 118 (295)
T 1yb4_A 57 -EFADIIFIMVPDTPQVEDVLFGEHGCAKTSLQGKTIVDMSSISPIETKRFAQRVNEMGADYL 118 (295)
T ss_dssp -HTCSEEEECCSSHHHHHHHHHSTTSSTTSCCTTEEEEECSCCCHHHHHHHHHHHHTTTEEEE
T ss_pred -hcCCEEEEECCCHHHHHHHHhCchhHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEE
Confidence 279999998865442222222 2211 1234666677764 2 2334566777888776
No 263
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=88.41 E-value=0.62 Score=49.96 Aligned_cols=35 Identities=23% Similarity=0.268 Sum_probs=31.2
Q ss_pred CCCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeCC
Q 006671 413 ELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (636)
Q Consensus 413 ~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs 448 (636)
.+.+++|+|.|+|.+|..+|+.+...|++ |.+.|.
T Consensus 181 ~v~~~kV~ViG~G~iG~~aa~~a~~lGa~-V~v~D~ 215 (381)
T 3p2y_A 181 TVKPASALVLGVGVAGLQALATAKRLGAK-TTGYDV 215 (381)
T ss_dssp EECCCEEEEESCSHHHHHHHHHHHHHTCE-EEEECS
T ss_pred CcCCCEEEEECchHHHHHHHHHHHHCCCE-EEEEeC
Confidence 35789999999999999999999999998 567776
No 264
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=88.27 E-value=0.67 Score=50.09 Aligned_cols=35 Identities=23% Similarity=0.414 Sum_probs=31.2
Q ss_pred CCCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeCC
Q 006671 413 ELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (636)
Q Consensus 413 ~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs 448 (636)
.+.+.+|+|.|+|.+|..+|+.+..+|++ |.+.|.
T Consensus 187 ~v~~~kV~ViG~G~iG~~aa~~a~~lGa~-V~v~D~ 221 (405)
T 4dio_A 187 TVPAAKIFVMGAGVAGLQAIATARRLGAV-VSATDV 221 (405)
T ss_dssp EECCCEEEEECCSHHHHHHHHHHHHTTCE-EEEECS
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCCE-EEEEcC
Confidence 46789999999999999999999999998 567776
No 265
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=87.98 E-value=0.44 Score=51.75 Aligned_cols=36 Identities=22% Similarity=0.326 Sum_probs=32.0
Q ss_pred CCCCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeC
Q 006671 412 KELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSD 447 (636)
Q Consensus 412 ~~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSD 447 (636)
.+++|++|+|.|.|.||...++.|.+.|++|+-|+.
T Consensus 8 ~~l~~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~ 43 (457)
T 1pjq_A 8 CQLRDRDCLIVGGGDVAERKARLLLEAGARLTVNAL 43 (457)
T ss_dssp ECCBTCEEEEECCSHHHHHHHHHHHHTTBEEEEEES
T ss_pred EECCCCEEEEECCCHHHHHHHHHHHhCcCEEEEEcC
Confidence 368999999999999999999999999999765554
No 266
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=87.93 E-value=3.5 Score=43.25 Aligned_cols=34 Identities=24% Similarity=0.250 Sum_probs=29.3
Q ss_pred CCCCcEEEEecCccHHHHHHHHHHHCCC-EEEEEe
Q 006671 413 ELKGLRCVVSGSGKIAMHVLEKLIAYGA-IPVSVS 446 (636)
Q Consensus 413 ~l~GkrVaIqGfGNVG~~aAe~L~e~GA-kVVaVS 446 (636)
--.|.+|+|.|.|.||..+++++...|+ +|+++.
T Consensus 211 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~ 245 (404)
T 3ip1_A 211 IRPGDNVVILGGGPIGLAAVAILKHAGASKVILSE 245 (404)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEC
Confidence 3468999999999999999999999999 766553
No 267
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=87.90 E-value=3 Score=41.02 Aligned_cols=31 Identities=19% Similarity=0.186 Sum_probs=26.5
Q ss_pred cEEEEecCccHHHHHHHHHHHCCCEEEEEeCC
Q 006671 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (636)
Q Consensus 417 krVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs 448 (636)
++|.|.|+|++|..+++.|.+.|..|+ +.|.
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~-~~~~ 31 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRRGHYLI-GVSR 31 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEE-EECS
T ss_pred CEEEEEcCcHHHHHHHHHHHHCCCEEE-EEEC
Confidence 379999999999999999999999854 4464
No 268
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=87.86 E-value=0.77 Score=48.14 Aligned_cols=35 Identities=17% Similarity=0.296 Sum_probs=30.8
Q ss_pred CCCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeCC
Q 006671 413 ELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (636)
Q Consensus 413 ~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs 448 (636)
++.+++|.|.|.|.+|..+++.|...|++|+ +.|.
T Consensus 163 ~l~~~~V~ViGaG~iG~~~a~~l~~~Ga~V~-~~d~ 197 (369)
T 2eez_A 163 GVAPASVVILGGGTVGTNAAKIALGMGAQVT-ILDV 197 (369)
T ss_dssp BBCCCEEEEECCSHHHHHHHHHHHHTTCEEE-EEES
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCEEE-EEEC
Confidence 4789999999999999999999999999854 5554
No 269
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=87.64 E-value=0.43 Score=51.07 Aligned_cols=35 Identities=23% Similarity=0.358 Sum_probs=31.4
Q ss_pred CCCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeCC
Q 006671 413 ELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (636)
Q Consensus 413 ~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs 448 (636)
++.|++|.|.|+|.+|..+++.+..+|++ |.+.|.
T Consensus 169 ~l~g~~V~ViGaG~iG~~aa~~a~~~Ga~-V~v~D~ 203 (401)
T 1x13_A 169 KVPPAKVMVIGAGVAGLAAIGAANSLGAI-VRAFDT 203 (401)
T ss_dssp EECCCEEEEECCSHHHHHHHHHHHHTTCE-EEEECS
T ss_pred CcCCCEEEEECCCHHHHHHHHHHHHCCCE-EEEEcC
Confidence 36799999999999999999999999997 667776
No 270
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=87.62 E-value=1 Score=47.51 Aligned_cols=98 Identities=16% Similarity=0.129 Sum_probs=56.3
Q ss_pred CcEEEEec-CccHHHHHHHHHHHCC------CEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCcee
Q 006671 416 GLRCVVSG-SGKIAMHVLEKLIAYG------AIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKY 488 (636)
Q Consensus 416 GkrVaIqG-fGNVG~~aAe~L~e~G------AkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~ 488 (636)
-.+|+|.| +|.||+.+++.|.+.+ ..++++++.+ ..|-.+.. ..+.+... ... ....
T Consensus 9 m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~-----~agk~~~~---------~~~~l~~~-~~~-~~~~ 72 (352)
T 2nqt_A 9 ATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAAT-----SAGSTLGE---------HHPHLTPL-AHR-VVEP 72 (352)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESS-----CTTSBGGG---------TCTTCGGG-TTC-BCEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCC-----cCCCchhh---------hccccccc-cee-eecc
Confidence 36899999 9999999999999877 4778886531 11111110 00011100 000 0011
Q ss_pred eCCCCccccccceEecCCCcCccchhhHHHhhhcCceEEEeCCCC
Q 006671 489 YDEAKPWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNM 533 (636)
Q Consensus 489 i~~~eil~~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgAN~ 533 (636)
.+ .+.|. +|||+|-|+. ...+.+-++.+ +.++++|-=++-.
T Consensus 73 ~~-~~~~~-~~DvVf~alg-~~~s~~~~~~~-~~G~~vIDlSa~~ 113 (352)
T 2nqt_A 73 TE-AAVLG-GHDAVFLALP-HGHSAVLAQQL-SPETLIIDCGADF 113 (352)
T ss_dssp CC-HHHHT-TCSEEEECCT-TSCCHHHHHHS-CTTSEEEECSSTT
T ss_pred CC-HHHhc-CCCEEEECCC-CcchHHHHHHH-hCCCEEEEECCCc
Confidence 11 11233 7899887764 44577778887 7788877655543
No 271
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=87.49 E-value=0.5 Score=50.90 Aligned_cols=37 Identities=27% Similarity=0.375 Sum_probs=33.4
Q ss_pred CCCCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeCCC
Q 006671 412 KELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAK 449 (636)
Q Consensus 412 ~~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~ 449 (636)
.+++|++|.|.|.|..|..+|+.|.++|++ |.++|.+
T Consensus 5 ~~~~~k~v~viG~G~sG~s~A~~l~~~G~~-V~~~D~~ 41 (451)
T 3lk7_A 5 TTFENKKVLVLGLARSGEAAARLLAKLGAI-VTVNDGK 41 (451)
T ss_dssp CTTTTCEEEEECCTTTHHHHHHHHHHTTCE-EEEEESS
T ss_pred hhcCCCEEEEEeeCHHHHHHHHHHHhCCCE-EEEEeCC
Confidence 357899999999999999999999999999 6888873
No 272
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=87.40 E-value=1.8 Score=43.65 Aligned_cols=32 Identities=25% Similarity=0.373 Sum_probs=27.6
Q ss_pred CcEEEEecCccHHHHHHHHHHHCCC---EEEEEeCC
Q 006671 416 GLRCVVSGSGKIAMHVLEKLIAYGA---IPVSVSDA 448 (636)
Q Consensus 416 GkrVaIqGfGNVG~~aAe~L~e~GA---kVVaVSDs 448 (636)
.++|.|.|.|++|..+++.|.+.|. . |.+.|.
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~-V~v~dr 37 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNR-ICVTNR 37 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGG-EEEECS
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCe-EEEEeC
Confidence 4789999999999999999999997 5 556665
No 273
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=86.94 E-value=1.1 Score=43.80 Aligned_cols=31 Identities=19% Similarity=0.276 Sum_probs=26.9
Q ss_pred cEEEEecCccHHHHHHHHHHHCCC----EEEEEeCC
Q 006671 417 LRCVVSGSGKIAMHVLEKLIAYGA----IPVSVSDA 448 (636)
Q Consensus 417 krVaIqGfGNVG~~aAe~L~e~GA----kVVaVSDs 448 (636)
++|.|.|.|++|...++.|.+.|. . |.+.|.
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~-V~~~~r 37 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQ-IICSDL 37 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGG-EEEECS
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCe-EEEEeC
Confidence 579999999999999999999997 6 456665
No 274
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=86.84 E-value=5.4 Score=43.29 Aligned_cols=32 Identities=19% Similarity=0.288 Sum_probs=27.8
Q ss_pred CcEEEEecCccHHHHHHHHHHHCCCEEEEEeCC
Q 006671 416 GLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (636)
Q Consensus 416 GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs 448 (636)
..|++|.|.|.||..+|..|.+.|..|+ +-|.
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~-~~D~ 39 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVV-CVDK 39 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEE-EECS
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEE-EEeC
Confidence 3699999999999999999999999965 4465
No 275
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=86.75 E-value=0.9 Score=47.45 Aligned_cols=92 Identities=17% Similarity=0.255 Sum_probs=57.3
Q ss_pred CcEEEEec-CccHHHHHHHHHHHC---CCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeCC
Q 006671 416 GLRCVVSG-SGKIAMHVLEKLIAY---GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE 491 (636)
Q Consensus 416 GkrVaIqG-fGNVG~~aAe~L~e~---GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~~ 491 (636)
..+|+|.| +|.||+.+.+.|.+. ...++++++.+ ..|-.+. + .+. +. .....+.
T Consensus 3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~-----~~G~~~~-------~---~~~--~i-----~~~~~~~ 60 (336)
T 2r00_A 3 QFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASER-----SEGKTYR-------F---NGK--TV-----RVQNVEE 60 (336)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTT-----TTTCEEE-------E---TTE--EE-----EEEEGGG
T ss_pred ccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCC-----CCCCcee-------e---cCc--ee-----EEecCCh
Confidence 36899999 999999999999887 46788998742 1121000 0 000 00 0011112
Q ss_pred CCccccccceEecCCCcCccchhhHHHhhhcCceEEEeCCC
Q 006671 492 AKPWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSN 532 (636)
Q Consensus 492 ~eil~~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgAN 532 (636)
+.| .+||++|-|. +...+.+.++.+.+.||++|-=++-
T Consensus 61 -~~~-~~vDvVf~a~-g~~~s~~~a~~~~~~G~~vId~s~~ 98 (336)
T 2r00_A 61 -FDW-SQVHIALFSA-GGELSAKWAPIAAEAGVVVIDNTSH 98 (336)
T ss_dssp -CCG-GGCSEEEECS-CHHHHHHHHHHHHHTTCEEEECSST
T ss_pred -HHh-cCCCEEEECC-CchHHHHHHHHHHHcCCEEEEcCCc
Confidence 245 3789988775 4556777788777778887765544
No 276
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=86.74 E-value=0.99 Score=47.30 Aligned_cols=101 Identities=18% Similarity=0.237 Sum_probs=59.8
Q ss_pred cEEEEec-CccHHHHHHHHHHHC-CCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCcc--ccccccCCceeeC-C
Q 006671 417 LRCVVSG-SGKIAMHVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLR--DYSKTYARSKYYD-E 491 (636)
Q Consensus 417 krVaIqG-fGNVG~~aAe~L~e~-GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~--~y~~~~p~a~~i~-~ 491 (636)
.+|+|.| +|.+|+.+++.|.+. ...++++.+++ ...|-.++.. .+.+. ..........+.+ .
T Consensus 5 ~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~s~----~~~g~~~~~~---------~~~~~~~~~~~~~~~~~~~~~d 71 (350)
T 2ep5_A 5 IKVSLLGSTGMVGQKMVKMLAKHPYLELVKVSASP----SKIGKKYKDA---------VKWIEQGDIPEEVQDLPIVSTN 71 (350)
T ss_dssp EEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECCG----GGTTSBHHHH---------CCCCSSSSCCHHHHTCBEECSS
T ss_pred cEEEEECcCCHHHHHHHHHHHhCCCcEEEEEecCh----hhcCCCHHHh---------cCcccccccccCCceeEEeeCC
Confidence 6899999 999999999998875 46888997431 1222222110 00000 0000000011111 1
Q ss_pred CCccccccceEecCCCcCccchhhHHHhhhcCceEEEeCCC
Q 006671 492 AKPWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSN 532 (636)
Q Consensus 492 ~eil~~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgAN 532 (636)
.+.| .+||+++-| +....+.+.+..+.+.|+++|--++.
T Consensus 72 ~~~~-~~vDvVf~a-tp~~~s~~~a~~~~~aG~~VId~s~~ 110 (350)
T 2ep5_A 72 YEDH-KDVDVVLSA-LPNELAESIELELVKNGKIVVSNASP 110 (350)
T ss_dssp GGGG-TTCSEEEEC-CCHHHHHHHHHHHHHTTCEEEECSST
T ss_pred HHHh-cCCCEEEEC-CChHHHHHHHHHHHHCCCEEEECCcc
Confidence 1234 489999965 46667888898888899998876654
No 277
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=86.71 E-value=1.4 Score=45.65 Aligned_cols=43 Identities=16% Similarity=0.159 Sum_probs=34.4
Q ss_pred HHHHHhCCCCCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeC
Q 006671 405 LILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSD 447 (636)
Q Consensus 405 ~~l~~~g~~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSD 447 (636)
.++...+....|.+|+|.|.|.||..+++.+...|++|+++..
T Consensus 177 ~al~~~~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~ 219 (366)
T 1yqd_A 177 SPLKYFGLDEPGKHIGIVGLGGLGHVAVKFAKAFGSKVTVIST 219 (366)
T ss_dssp HHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEES
T ss_pred HHHHhcCcCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 3444444444799999999999999999999999999776654
No 278
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=86.66 E-value=0.78 Score=45.23 Aligned_cols=54 Identities=13% Similarity=0.149 Sum_probs=33.3
Q ss_pred chhHHHHHHHHHHH-HhCCCCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEeCC
Q 006671 395 TGYGLVFFAQLILA-DMNKELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSDA 448 (636)
Q Consensus 395 TG~GV~~~~~~~l~-~~g~~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVSDs 448 (636)
|--|+-.+.+.+.- ....+++||+|+|.| .|.+|.++|+.|.+.|++|+.+...
T Consensus 7 ~~~~~~~~~~~~~~~~~~m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~ 62 (271)
T 4iin_A 7 HSSGVDLGTENLYFQSNAMQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRS 62 (271)
T ss_dssp -----------------CCCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred cccccccCcceehhhhhhcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 33444444444433 345789999999998 5899999999999999998776653
No 279
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=86.62 E-value=0.68 Score=49.28 Aligned_cols=114 Identities=18% Similarity=0.226 Sum_probs=66.4
Q ss_pred CCCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeCCC
Q 006671 413 ELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEA 492 (636)
Q Consensus 413 ~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~~~ 492 (636)
++.|++|.|.|+|.+|..+++.|...|++-|.+.|. +.+++..+. ... +++.++.+
T Consensus 164 ~l~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r----------~~~ra~~la---~~~-----------g~~~~~~~ 219 (404)
T 1gpj_A 164 SLHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANR----------TYERAVELA---RDL-----------GGEAVRFD 219 (404)
T ss_dssp CCTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECS----------SHHHHHHHH---HHH-----------TCEECCGG
T ss_pred cccCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeC----------CHHHHHHHH---HHc-----------CCceecHH
Confidence 678999999999999999999999999933556665 222221111 111 11111111
Q ss_pred Ccc--ccccceEecCCCc--CccchhhHHH-hhh---cCceEEEeCCCCC--CCHHHHHHHHHCCceE--eccc
Q 006671 493 KPW--NERCDVAFPCASQ--NEIDQSDAIN-LVN---SGCRILVEGSNMP--CTPEAVDVLKKANVLI--APAM 554 (636)
Q Consensus 493 eil--~~~cDIliPcA~~--n~It~enA~~-l~~---~~akiVvEgAN~P--~T~eA~~iL~~rGIlv--iPD~ 554 (636)
++- -..+||+|-|... ..++.+.... +.+ .+-.+++..+. | ++|+ +..-.||.+ +||.
T Consensus 220 ~l~~~l~~aDvVi~at~~~~~~~~~~~l~~~~lk~r~~~~~v~vdia~-P~~i~~~---l~~l~~v~l~d~d~l 289 (404)
T 1gpj_A 220 ELVDHLARSDVVVSATAAPHPVIHVDDVREALRKRDRRSPILIIDIAN-PRDVEEG---VENIEDVEVRTIDDL 289 (404)
T ss_dssp GHHHHHHTCSEEEECCSSSSCCBCHHHHHHHHHHCSSCCCEEEEECCS-SCSBCTT---GGGSTTEEEEEHHHH
T ss_pred hHHHHhcCCCEEEEccCCCCceecHHHHHHHHHhccCCCCEEEEEccC-CCCCCcc---ccccCCeEEEeHhhH
Confidence 111 1379999998753 3344454444 221 24567777777 5 3543 233456666 6665
No 280
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=86.52 E-value=0.31 Score=48.56 Aligned_cols=36 Identities=22% Similarity=0.301 Sum_probs=31.4
Q ss_pred CCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeCCC
Q 006671 414 LKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAK 449 (636)
Q Consensus 414 l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~ 449 (636)
|++++|+|.|.|.+|..+|+.|...|..-+.|.|.+
T Consensus 29 l~~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d 64 (249)
T 1jw9_B 29 LKDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFD 64 (249)
T ss_dssp HHHCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred HhCCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCC
Confidence 457899999999999999999999998657788863
No 281
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=86.43 E-value=2.3 Score=43.73 Aligned_cols=33 Identities=27% Similarity=0.111 Sum_probs=29.4
Q ss_pred CcEEEEecCccHHHH-HHHHHHHCCCEEEEEeCCC
Q 006671 416 GLRCVVSGSGKIAMH-VLEKLIAYGAIPVSVSDAK 449 (636)
Q Consensus 416 GkrVaIqGfGNVG~~-aAe~L~e~GAkVVaVSDs~ 449 (636)
.++|.|.|.|..|.. +|++|.++|++ |.++|.+
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~-V~~~D~~ 37 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFE-VSGCDAK 37 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCE-EEEEESS
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCE-EEEEcCC
Confidence 478999999999995 89999999999 6889973
No 282
>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*
Probab=86.26 E-value=0.33 Score=51.55 Aligned_cols=90 Identities=11% Similarity=0.121 Sum_probs=52.2
Q ss_pred cEEEEec-CccHHHHHHH-HHHHCCC---EEEEE-eCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeC
Q 006671 417 LRCVVSG-SGKIAMHVLE-KLIAYGA---IPVSV-SDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD 490 (636)
Q Consensus 417 krVaIqG-fGNVG~~aAe-~L~e~GA---kVVaV-SDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~ 490 (636)
++|+|.| +|.||+.+++ .|.+... .++.+ +++.|.-+ .. ... ..+. ....+
T Consensus 2 ~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i~~~~~~s~G~~v-------~~------~~g--~~i~--------~~~~~ 58 (367)
T 1t4b_A 2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAA-------PS------FGG--TTGT--------LQDAF 58 (367)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBC-------CG------GGT--CCCB--------CEETT
T ss_pred cEEEEECCCCHHHHHHHHHHHhcCCCCeEEEEEEEeCCCCCCc-------cc------cCC--CceE--------EEecC
Confidence 4899999 9999999999 6665543 33333 34433321 10 000 0010 01111
Q ss_pred CCCccccccceEecCCCcCccchhhHHHhhhcCce-EEEeCC
Q 006671 491 EAKPWNERCDVAFPCASQNEIDQSDAINLVNSGCR-ILVEGS 531 (636)
Q Consensus 491 ~~eil~~~cDIliPcA~~n~It~enA~~l~~~~ak-iVvEgA 531 (636)
..+.| .+|||+|-|+ +...+.+.++.+.+.||| +|+..+
T Consensus 59 ~~~~~-~~~DvVf~a~-g~~~s~~~a~~~~~~G~k~vVID~s 98 (367)
T 1t4b_A 59 DLEAL-KALDIIVTCQ-GGDYTNEIYPKLRESGWQGYWIDAA 98 (367)
T ss_dssp CHHHH-HTCSEEEECS-CHHHHHHHHHHHHHTTCCCEEEECS
T ss_pred ChHHh-cCCCEEEECC-CchhHHHHHHHHHHCCCCEEEEcCC
Confidence 11124 3899999876 566678888888888883 566544
No 283
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=86.08 E-value=2.6 Score=45.08 Aligned_cols=31 Identities=23% Similarity=0.201 Sum_probs=26.7
Q ss_pred cEEEEecCccHHHHHHHHHHHCCCEEEEEeCC
Q 006671 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (636)
Q Consensus 417 krVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs 448 (636)
++|+|.|.|+||..+|..|.+.|..|+ +.|.
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~G~~V~-~~d~ 31 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSARGHEVI-GVDV 31 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEE-EECS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEE-EEEC
Confidence 379999999999999999999999954 4564
No 284
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=86.00 E-value=2.6 Score=43.10 Aligned_cols=105 Identities=17% Similarity=0.127 Sum_probs=58.7
Q ss_pred CCcEEEEecCccHHHHHHHHHHHCC----CEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeC
Q 006671 415 KGLRCVVSGSGKIAMHVLEKLIAYG----AIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD 490 (636)
Q Consensus 415 ~GkrVaIqGfGNVG~~aAe~L~e~G----AkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~ 490 (636)
.-++|.|.|.|++|..+|..|.+.| .. |.+.|. +++. +.++.+. + . +....+
T Consensus 21 ~~mkI~iIG~G~mG~ala~~L~~~G~~~~~~-V~v~~r-----~~~~---~~~~~l~---~-~-----------G~~~~~ 76 (322)
T 2izz_A 21 QSMSVGFIGAGQLAFALAKGFTAAGVLAAHK-IMASSP-----DMDL---ATVSALR---K-M-----------GVKLTP 76 (322)
T ss_dssp -CCCEEEESCSHHHHHHHHHHHHTTSSCGGG-EEEECS-----CTTS---HHHHHHH---H-H-----------TCEEES
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCCcce-EEEECC-----CccH---HHHHHHH---H-c-----------CCEEeC
Confidence 3458999999999999999999999 56 456665 2221 1222221 1 1 122211
Q ss_pred C-CCccccccceEecCCCcCccchhhHHHhhh-c-CceEEEeCCCCCCCHHHHHHHHH
Q 006671 491 E-AKPWNERCDVAFPCASQNEIDQSDAINLVN-S-GCRILVEGSNMPCTPEAVDVLKK 545 (636)
Q Consensus 491 ~-~eil~~~cDIliPcA~~n~It~enA~~l~~-~-~akiVvEgAN~P~T~eA~~iL~~ 545 (636)
. .+. -.+|||+|-|..... ..+-+..|.. . .-++|+.-+|+-...+..+.|.+
T Consensus 77 ~~~e~-~~~aDvVilav~~~~-~~~vl~~l~~~l~~~~ivvs~s~gi~~~~l~~~l~~ 132 (322)
T 2izz_A 77 HNKET-VQHSDVLFLAVKPHI-IPFILDEIGADIEDRHIVVSCAAGVTISSIEKKLSA 132 (322)
T ss_dssp CHHHH-HHHCSEEEECSCGGG-HHHHHHHHGGGCCTTCEEEECCTTCCHHHHHHHHHT
T ss_pred ChHHH-hccCCEEEEEeCHHH-HHHHHHHHHhhcCCCCEEEEeCCCCCHHHHHHHHhh
Confidence 1 111 237999999887543 3333333421 1 23577777775433344556665
No 285
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=85.94 E-value=0.94 Score=44.71 Aligned_cols=36 Identities=25% Similarity=0.207 Sum_probs=30.4
Q ss_pred CCCCCcEEEEecCc---cHHHHHHHHHHHCCCEEEEEeCC
Q 006671 412 KELKGLRCVVSGSG---KIAMHVLEKLIAYGAIPVSVSDA 448 (636)
Q Consensus 412 ~~l~GkrVaIqGfG---NVG~~aAe~L~e~GAkVVaVSDs 448 (636)
.+|+||+++|.|.+ -+|..+|+.|.+.|++| .++|.
T Consensus 2 ~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~V-vi~~r 40 (256)
T 4fs3_A 2 LNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKL-VFTYR 40 (256)
T ss_dssp CCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEE-EEEES
T ss_pred cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEE-EEEEC
Confidence 37899999999953 59999999999999995 45555
No 286
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=85.91 E-value=0.62 Score=45.76 Aligned_cols=34 Identities=15% Similarity=0.329 Sum_probs=30.6
Q ss_pred CCcEEEEecCccHHHHHHHHHHHCCCEEEEEeCC
Q 006671 415 KGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (636)
Q Consensus 415 ~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs 448 (636)
++++|+|.|.|-+|+++++.|.+.|.+|++++-.
T Consensus 2 ~~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~ 35 (286)
T 3gpi_A 2 SLSKILIAGCGDLGLELARRLTAQGHEVTGLRRS 35 (286)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHTTCCEEEEECT
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4679999999999999999999999998888654
No 287
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=85.87 E-value=0.79 Score=44.09 Aligned_cols=37 Identities=14% Similarity=0.205 Sum_probs=27.4
Q ss_pred CCCCCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeCC
Q 006671 411 NKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (636)
Q Consensus 411 g~~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs 448 (636)
+..+.+++|.|.|.|++|..+|..|.+.|..|+ +.|.
T Consensus 14 ~~~~~~~~I~iiG~G~mG~~la~~l~~~g~~V~-~~~~ 50 (209)
T 2raf_A 14 NLYFQGMEITIFGKGNMGQAIGHNFEIAGHEVT-YYGS 50 (209)
T ss_dssp ------CEEEEECCSHHHHHHHHHHHHTTCEEE-EECT
T ss_pred ccccCCCEEEEECCCHHHHHHHHHHHHCCCEEE-EEcC
Confidence 456788999999999999999999999999854 4454
No 288
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=85.86 E-value=2.9 Score=42.98 Aligned_cols=76 Identities=11% Similarity=0.215 Sum_probs=46.8
Q ss_pred CCcEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeCCCCc
Q 006671 415 KGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKP 494 (636)
Q Consensus 415 ~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~~~ei 494 (636)
.-|+|.|.|.|.+|...|..|. .|.. |.+-|. +.+.++.+.+. +.+ ....++++.++-+-
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-aG~~-V~v~d~----------~~~~~~~~~~~------l~~--~~~~~i~~~~~~~~ 70 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-SKHE-VVLQDV----------SEKALEAAREQ------IPE--ELLSKIEFTTTLEK 70 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TTSE-EEEECS----------CHHHHHHHHHH------SCG--GGGGGEEEESSCTT
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-cCCE-EEEEEC----------CHHHHHHHHHH------HHH--HHhCCeEEeCCHHH
Confidence 3579999999999999999999 9998 456564 33444333322 110 00112332222122
Q ss_pred cccccceEecCCCcCcc
Q 006671 495 WNERCDVAFPCASQNEI 511 (636)
Q Consensus 495 l~~~cDIliPcA~~n~I 511 (636)
-.+||++|.|..++.-
T Consensus 71 -~~~aDlVieavpe~~~ 86 (293)
T 1zej_A 71 -VKDCDIVMEAVFEDLN 86 (293)
T ss_dssp -GGGCSEEEECCCSCHH
T ss_pred -HcCCCEEEEcCcCCHH
Confidence 3589999999987653
No 289
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=85.77 E-value=0.99 Score=43.20 Aligned_cols=36 Identities=31% Similarity=0.309 Sum_probs=31.6
Q ss_pred CCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEeCC
Q 006671 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSDA 448 (636)
Q Consensus 413 ~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVSDs 448 (636)
+++|++++|.| .|.+|.++|+.|.+.|++|+.+.+.
T Consensus 2 ~l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r 38 (247)
T 2hq1_A 2 QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSP 38 (247)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCc
Confidence 47899999998 6999999999999999998877554
No 290
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=85.67 E-value=1.3 Score=43.32 Aligned_cols=32 Identities=6% Similarity=0.071 Sum_probs=27.1
Q ss_pred CcEEEEecCccHHHHHHHHHHHCC----CEEEEEeCC
Q 006671 416 GLRCVVSGSGKIAMHVLEKLIAYG----AIPVSVSDA 448 (636)
Q Consensus 416 GkrVaIqGfGNVG~~aAe~L~e~G----AkVVaVSDs 448 (636)
.++|.|.|.|++|..++..|.+.| .. |.+.|.
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~-v~~~~~ 39 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANANIIKKEN-LFYYGP 39 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHHTSSCGGG-EEEECS
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCCCCCe-EEEEeC
Confidence 468999999999999999999988 45 566675
No 291
>1r0k_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH dependent, fosmidomycin, non- mevalonate pathway, oxidoreductase; 1.91A {Zymomonas mobilis} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1r0l_A*
Probab=85.60 E-value=2.3 Score=45.66 Aligned_cols=122 Identities=13% Similarity=0.166 Sum_probs=70.5
Q ss_pred cEEEEecC-ccHHHHHHHHHHHCC--CEEEEE-eCCCCceeCCCCCCHHHHHHHHHHHhhcCC---ccc---c---cccc
Q 006671 417 LRCVVSGS-GKIAMHVLEKLIAYG--AIPVSV-SDAKGYLVDEDGFDYMKISFLRDIKSQQRS---LRD---Y---SKTY 483 (636)
Q Consensus 417 krVaIqGf-GNVG~~aAe~L~e~G--AkVVaV-SDs~G~IydpdGLDve~L~~L~~~k~~~g~---l~~---y---~~~~ 483 (636)
++|+|.|+ |.||+.+++.+.+.. .+|+++ +++ +++.+.... ++-+-. +.+ + .+..
T Consensus 5 ~rI~ILGsTGSIG~~~l~vi~~~p~~~~v~al~ag~----------ni~~l~~~~--~~f~~~~v~v~d~~~~~~l~~~l 72 (388)
T 1r0k_A 5 RTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANR----------NVKDLADAA--KRTNAKRAVIADPSLYNDLKEAL 72 (388)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESS----------CHHHHHHHH--HHTTCSEEEESCGGGHHHHHHHT
T ss_pred eEEEEECCCeEeHHHHHHHHHhCcCcEEEEEEEcCC----------CHHHHHHHH--HHcCCcEEEEcChHHHHHHHHHh
Confidence 78999999 999999999998853 788888 654 333332111 110000 000 0 0000
Q ss_pred C--CceeeCCC----CccccccceEecCCCcCccchhhHHHhhhcCceEEEeCCCCCCCHHH----HHHHHHCCceEecc
Q 006671 484 A--RSKYYDEA----KPWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEA----VDVLKKANVLIAPA 553 (636)
Q Consensus 484 p--~a~~i~~~----eil~~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA----~~iL~~rGIlviPD 553 (636)
+ +.+.+.+. ++...++|+++-|..+ ...-+.+-.-++.|.+++. ||=.+.-.+ .+..+++|+.++|-
T Consensus 73 ~~~~~~v~~g~~~~~el~~~~iDvVV~ai~G-~aGl~ptlaAi~aGK~Vvl--ANKE~lv~~G~~l~~~A~~~gv~liPV 149 (388)
T 1r0k_A 73 AGSSVEAAAGADALVEAAMMGADWTMAAIIG-CAGLKATLAAIRKGKTVAL--ANKESLVSAGGLMIDAVREHGTTLLPV 149 (388)
T ss_dssp TTCSSEEEESHHHHHHHHTSCCSEEEECCCS-GGGHHHHHHHHHTTSEEEE--CCSHHHHTTHHHHHHHHHHHTCEEEEC
T ss_pred ccCCcEEEeCccHHHHHHcCCCCEEEEeCCC-HHHHHHHHHHHHCCCEEEE--eCcHHHHhhHHHHHHHHHHcCCEEEEe
Confidence 1 11222121 2334458999998755 3344555444677888884 786643333 34456789999997
No 292
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=85.21 E-value=2.4 Score=43.48 Aligned_cols=106 Identities=17% Similarity=0.265 Sum_probs=62.3
Q ss_pred CcEEEEecC-ccHHHHHHHHHHHCCCEEEEEeCCC--CceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeCCC
Q 006671 416 GLRCVVSGS-GKIAMHVLEKLIAYGAIPVSVSDAK--GYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEA 492 (636)
Q Consensus 416 GkrVaIqGf-GNVG~~aAe~L~e~GAkVVaVSDs~--G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~~~ 492 (636)
..+++|+|. |+.|+..++.|.+.|.++|+-.+.. |.-+ .|+ .-| +.. +
T Consensus 13 ~~~vvV~Gasg~~G~~~~~~l~~~g~~~v~~VnP~~~g~~i--~G~------------------~vy----~sl-----~ 63 (297)
T 2yv2_A 13 ETRVLVQGITGREGSFHAKAMLEYGTKVVAGVTPGKGGSEV--HGV------------------PVY----DSV-----K 63 (297)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTCEE--TTE------------------EEE----SSH-----H
T ss_pred CCEEEEECCCCCHHHHHHHHHHhCCCcEEEEeCCCCCCceE--CCE------------------eee----CCH-----H
Confidence 346888897 9999999999999999877655542 1100 011 111 111 1
Q ss_pred Cccc-cc-cceEecCCCcCccchhhHHHhhhcCce-EEEeCCCCCCC--HHHHHHHHHCCceEe
Q 006671 493 KPWN-ER-CDVAFPCASQNEIDQSDAINLVNSGCR-ILVEGSNMPCT--PEAVDVLKKANVLIA 551 (636)
Q Consensus 493 eil~-~~-cDIliPcA~~n~It~enA~~l~~~~ak-iVvEgAN~P~T--~eA~~iL~~rGIlvi 551 (636)
++.+ .+ +|+++-|... ....+.+...++.+++ +|+-....+.+ .+..++.++.|+.++
T Consensus 64 el~~~~~~~DvaIi~vp~-~~~~~~v~ea~~~Gi~~vVi~t~G~~~~~~~~l~~~A~~~gi~vi 126 (297)
T 2yv2_A 64 EALAEHPEINTSIVFVPA-PFAPDAVYEAVDAGIRLVVVITEGIPVHDTMRFVNYARQKGATII 126 (297)
T ss_dssp HHHHHCTTCCEEEECCCG-GGHHHHHHHHHHTTCSEEEECCCCCCHHHHHHHHHHHHHHTCEEE
T ss_pred HHhhcCCCCCEEEEecCH-HHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCCEEE
Confidence 1222 13 7888866543 4456667777778999 44433333322 244566678898554
No 293
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=85.14 E-value=0.93 Score=47.16 Aligned_cols=115 Identities=14% Similarity=0.189 Sum_probs=65.7
Q ss_pred CCcEEEEec-CccHHHH-HH----HHHHHCC-CEEE---------EEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccc
Q 006671 415 KGLRCVVSG-SGKIAMH-VL----EKLIAYG-AIPV---------SVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRD 478 (636)
Q Consensus 415 ~GkrVaIqG-fGNVG~~-aA----e~L~e~G-AkVV---------aVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~ 478 (636)
+-.||.|.| +|.+|.. .+ +.+.+.+ ..++ +|+|. |.++...+ .+.
T Consensus 5 ~~irigiiG~~G~~g~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~av~~~----------~~~~a~~~---a~~------ 65 (383)
T 3oqb_A 5 QRLGLIMNGVTGRMGLNQHLIRSIVAIRDQGGVRLKNGDRIMPDPILVGR----------SAEKVEAL---AKR------ 65 (383)
T ss_dssp EEEEEEEESTTSTHHHHTTTTTTHHHHHHHTSEECTTSCEEEEEEEEECS----------SSHHHHHH---HHH------
T ss_pred ceeEEEEEeccchhhhhhhHHHHHHHHhhcCceeecCCcccceeeEEEcC----------CHHHHHHH---HHH------
Confidence 345899999 9999996 45 5665544 2211 46665 22332211 111
Q ss_pred cccccCCceeeC-CCCccc-cccceEecCCCcCccchhhHHHhhhcCceEEEeCCCCCCCHHHHHH---HHHCCceEecc
Q 006671 479 YSKTYARSKYYD-EAKPWN-ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDV---LKKANVLIAPA 553 (636)
Q Consensus 479 y~~~~p~a~~i~-~~eil~-~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~~i---L~~rGIlviPD 553 (636)
++-....+ -+++++ .++|+++-|. .+..+.+.+...++.|..++||=-=..+..++.++ .+++|+.+...
T Consensus 66 ----~~~~~~~~~~~~ll~~~~iD~V~i~t-p~~~h~~~~~~al~~Gk~V~~EKP~a~~~~~~~~l~~~a~~~~~~~~v~ 140 (383)
T 3oqb_A 66 ----FNIARWTTDLDAALADKNDTMFFDAA-TTQARPGLLTQAINAGKHVYCEKPIATNFEEALEVVKLANSKGVKHGTV 140 (383)
T ss_dssp ----TTCCCEESCHHHHHHCSSCCEEEECS-CSSSSHHHHHHHHTTTCEEEECSCSCSSHHHHHHHHHHHHHTTCCEEEC
T ss_pred ----hCCCcccCCHHHHhcCCCCCEEEECC-CchHHHHHHHHHHHCCCeEEEcCCCCCCHHHHHHHHHHHHHcCCeEEEE
Confidence 11111222 244553 4689998555 55778888888889999999884111122344443 35778765433
No 294
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=85.06 E-value=1.7 Score=44.95 Aligned_cols=42 Identities=21% Similarity=0.215 Sum_probs=33.3
Q ss_pred HHHHhCCCCCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeC
Q 006671 406 ILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSD 447 (636)
Q Consensus 406 ~l~~~g~~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSD 447 (636)
++...+....|.+|+|.|.|.||..+++.+...|++|+++..
T Consensus 171 ~l~~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~ 212 (357)
T 2cf5_A 171 PLSHFGLKQPGLRGGILGLGGVGHMGVKIAKAMGHHVTVISS 212 (357)
T ss_dssp HHHHTSTTSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEES
T ss_pred HHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeC
Confidence 344444333789999999999999999999999999776654
No 295
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=85.05 E-value=5.8 Score=35.63 Aligned_cols=107 Identities=11% Similarity=0.034 Sum_probs=62.0
Q ss_pred cEEEEecC----ccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeCCC
Q 006671 417 LRCVVSGS----GKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEA 492 (636)
Q Consensus 417 krVaIqGf----GNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~~~ 492 (636)
++|+|+|. +.+|..+.+.|.+.|.+|..| ||.+=.+ ..+.- ||...-
T Consensus 5 ~siAVVGaS~~~~~~g~~v~~~L~~~g~~V~pV--------nP~~~~i-------------~G~~~----y~sl~d---- 55 (122)
T 3ff4_A 5 KKTLILGATPETNRYAYLAAERLKSHGHEFIPV--------GRKKGEV-------------LGKTI----INERPV---- 55 (122)
T ss_dssp CCEEEETCCSCTTSHHHHHHHHHHHHTCCEEEE--------SSSCSEE-------------TTEEC----BCSCCC----
T ss_pred CEEEEEccCCCCCCHHHHHHHHHHHCCCeEEEE--------CCCCCcC-------------CCeec----cCChHH----
Confidence 68999996 779999999999999988766 4432100 00111 232221
Q ss_pred CccccccceEecCCCcCccchhhHHHhhhcCceEEEeCCCCCCCHHHHHHHHHCCceEecccccccccc
Q 006671 493 KPWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANVLIAPAMAAGAGGV 561 (636)
Q Consensus 493 eil~~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~~iL~~rGIlviPD~~aNAGGV 561 (636)
+-+ .|+++-|-.... ..+-.+.+.+.++|.|+= .-+...+++.++.++.||.++| |+=||
T Consensus 56 -lp~--vDlavi~~p~~~-v~~~v~e~~~~g~k~v~~-~~G~~~~e~~~~a~~~Girvv~----nC~gv 115 (122)
T 3ff4_A 56 -IEG--VDTVTLYINPQN-QLSEYNYILSLKPKRVIF-NPGTENEELEEILSENGIEPVI----GCTLV 115 (122)
T ss_dssp -CTT--CCEEEECSCHHH-HGGGHHHHHHHCCSEEEE-CTTCCCHHHHHHHHHTTCEEEE----SCHHH
T ss_pred -CCC--CCEEEEEeCHHH-HHHHHHHHHhcCCCEEEE-CCCCChHHHHHHHHHcCCeEEC----CcCeE
Confidence 112 455444332211 112222223337776652 3344678999999999999985 55444
No 296
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=85.02 E-value=0.54 Score=48.53 Aligned_cols=52 Identities=21% Similarity=0.275 Sum_probs=32.3
Q ss_pred hHHHHHHHHHHHHhC-----CCCCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeCC
Q 006671 397 YGLVFFAQLILADMN-----KELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (636)
Q Consensus 397 ~GV~~~~~~~l~~~g-----~~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs 448 (636)
-|+-|.=+-+|+.+| ..|+.++|+|+|.|-+|..+|+.|...|..-++|.|.
T Consensus 12 ~~~~y~r~i~L~~~G~~~~q~kL~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~ 68 (292)
T 3h8v_A 12 SGLVPRGSMALKRMGIVSDYEKIRTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDY 68 (292)
T ss_dssp --------------------CGGGGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECC
T ss_pred CCCCchHhhcccccChHHHHHHHhCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECC
Confidence 344555555565554 3478899999999999999999999999766777775
No 297
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=84.85 E-value=2.6 Score=45.88 Aligned_cols=31 Identities=16% Similarity=0.133 Sum_probs=26.2
Q ss_pred cEEEEecCccHHHHHHHHHHHC--CCEEEEEeCC
Q 006671 417 LRCVVSGSGKIAMHVLEKLIAY--GAIPVSVSDA 448 (636)
Q Consensus 417 krVaIqGfGNVG~~aAe~L~e~--GAkVVaVSDs 448 (636)
++|+|.|.|.||..+|..|.+. |..|+ +.|.
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~-~~D~ 42 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVT-VVDM 42 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEE-EECS
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEE-EEEC
Confidence 5899999999999999999998 67855 4564
No 298
>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1
Probab=84.83 E-value=1.1 Score=46.83 Aligned_cols=89 Identities=18% Similarity=0.226 Sum_probs=54.4
Q ss_pred cEEEEec-CccHHHHHHHHHHHCC---CEEEEEeCCC--CceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeC
Q 006671 417 LRCVVSG-SGKIAMHVLEKLIAYG---AIPVSVSDAK--GYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD 490 (636)
Q Consensus 417 krVaIqG-fGNVG~~aAe~L~e~G---AkVVaVSDs~--G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~ 490 (636)
.+|+|.| +|.||+.+++.|.+.+ ..++++.+.+ |.-+.-+|. +. .....+
T Consensus 7 ~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~g~~~~~~g~-------------------~i-----~~~~~~ 62 (340)
T 2hjs_A 7 LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMGFAES-------------------SL-----RVGDVD 62 (340)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEEETTE-------------------EE-----ECEEGG
T ss_pred cEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCccccCCc-------------------ce-----EEecCC
Confidence 5799999 9999999999998654 4567777642 211100000 00 000111
Q ss_pred CCCccccccceEecCCCcCccchhhHHHhhhcCceEEEeCCC
Q 006671 491 EAKPWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSN 532 (636)
Q Consensus 491 ~~eil~~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgAN 532 (636)
.+. |. .||++|-|+. ...+.+.++.+.+.|+++|.=.+.
T Consensus 63 ~~~-~~-~~DvV~~a~g-~~~s~~~a~~~~~aG~kvId~Sa~ 101 (340)
T 2hjs_A 63 SFD-FS-SVGLAFFAAA-AEVSRAHAERARAAGCSVIDLSGA 101 (340)
T ss_dssp GCC-GG-GCSEEEECSC-HHHHHHHHHHHHHTTCEEEETTCT
T ss_pred HHH-hc-CCCEEEEcCC-cHHHHHHHHHHHHCCCEEEEeCCC
Confidence 222 43 7899998764 445677777777788887754443
No 299
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=84.75 E-value=1.1 Score=42.68 Aligned_cols=35 Identities=34% Similarity=0.485 Sum_probs=30.6
Q ss_pred CCCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEe
Q 006671 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (636)
Q Consensus 412 ~~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVS 446 (636)
.+++|++++|.| .|-+|+++++.|.+.|++|+.++
T Consensus 3 ~~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~ 38 (244)
T 1cyd_A 3 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVT 38 (244)
T ss_dssp CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEe
Confidence 468899999998 59999999999999999976654
No 300
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=84.62 E-value=1.3 Score=42.60 Aligned_cols=109 Identities=12% Similarity=0.149 Sum_probs=60.3
Q ss_pred CcEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeCCCCcc
Q 006671 416 GLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKPW 495 (636)
Q Consensus 416 GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~~~eil 495 (636)
.++|+|.|+|.||+.+++.|.+.|. |+ +.|. || +.+. ... .+ +.-+ +.++ +..+.|
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g~-v~-vid~-----~~-----~~~~---~~~--~~-~~~i---~gd~---~~~~~l 64 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSEV-FV-LAED-----EN-----VRKK---VLR--SG-ANFV---HGDP---TRVSDL 64 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSEE-EE-EESC-----GG-----GHHH---HHH--TT-CEEE---ESCT---TCHHHH
T ss_pred CCEEEEECCChHHHHHHHHHHhCCe-EE-EEEC-----CH-----HHHH---HHh--cC-CeEE---EcCC---CCHHHH
Confidence 4589999999999999999999998 55 5565 22 2221 111 11 1100 0000 111122
Q ss_pred ----ccccceEecCCCcCccch---hhHHHhhhcCceEEEeCCCCCCCHHHHHHHHHCCce--Eecc
Q 006671 496 ----NERCDVAFPCASQNEIDQ---SDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANVL--IAPA 553 (636)
Q Consensus 496 ----~~~cDIliPcA~~n~It~---enA~~l~~~~akiVvEgAN~P~T~eA~~iL~~rGIl--viPD 553 (636)
-..+|.++-|....+.+. ..|.++ ..++++|+...| ++..+.|++.|+- +.|.
T Consensus 65 ~~a~i~~ad~vi~~~~~d~~n~~~~~~a~~~-~~~~~iia~~~~----~~~~~~l~~~G~~~vi~p~ 126 (234)
T 2aef_A 65 EKANVRGARAVIVDLESDSETIHCILGIRKI-DESVRIIAEAER----YENIEQLRMAGADQVISPF 126 (234)
T ss_dssp HHTTCTTCSEEEECCSCHHHHHHHHHHHHHH-CSSSEEEEECSS----GGGHHHHHHHTCSEEECHH
T ss_pred HhcCcchhcEEEEcCCCcHHHHHHHHHHHHH-CCCCeEEEEECC----HhHHHHHHHCCCCEEECHH
Confidence 137899888776544433 334443 223588887643 3445677777764 4443
No 301
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=84.49 E-value=0.64 Score=46.38 Aligned_cols=36 Identities=17% Similarity=0.210 Sum_probs=32.3
Q ss_pred CCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeCCC
Q 006671 414 LKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAK 449 (636)
Q Consensus 414 l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~ 449 (636)
|++++|+|.|.|-+|..+++.|...|..-++|.|.+
T Consensus 26 l~~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d 61 (251)
T 1zud_1 26 LLDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDD 61 (251)
T ss_dssp HHTCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCC
T ss_pred HhcCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 467899999999999999999999999778888863
No 302
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=84.41 E-value=1.1 Score=43.70 Aligned_cols=34 Identities=26% Similarity=0.272 Sum_probs=29.9
Q ss_pred CCCCcEEEEecC-c-cHHHHHHHHHHHCCCEEEEEe
Q 006671 413 ELKGLRCVVSGS-G-KIAMHVLEKLIAYGAIPVSVS 446 (636)
Q Consensus 413 ~l~GkrVaIqGf-G-NVG~~aAe~L~e~GAkVVaVS 446 (636)
+++|++++|.|. | .+|.++|+.|.+.|++|+.+.
T Consensus 19 ~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~ 54 (266)
T 3o38_A 19 LLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISD 54 (266)
T ss_dssp TTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEec
Confidence 588999999997 8 599999999999999976553
No 303
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=84.41 E-value=4.9 Score=44.12 Aligned_cols=31 Identities=10% Similarity=-0.066 Sum_probs=27.3
Q ss_pred cEEEEecCccHHHHHHHHHHHC-CC-EEEEEeCC
Q 006671 417 LRCVVSGSGKIAMHVLEKLIAY-GA-IPVSVSDA 448 (636)
Q Consensus 417 krVaIqGfGNVG~~aAe~L~e~-GA-kVVaVSDs 448 (636)
++|+|.|.|.||..+|..|.+. |. .|+ +.|.
T Consensus 19 mkIaVIGlG~mG~~lA~~la~~~G~~~V~-~~D~ 51 (478)
T 3g79_A 19 KKIGVLGMGYVGIPAAVLFADAPCFEKVL-GFQR 51 (478)
T ss_dssp CEEEEECCSTTHHHHHHHHHHSTTCCEEE-EECC
T ss_pred CEEEEECcCHHHHHHHHHHHHhCCCCeEE-EEEC
Confidence 6899999999999999999999 99 854 5565
No 304
>2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus}
Probab=84.25 E-value=0.48 Score=49.49 Aligned_cols=92 Identities=18% Similarity=0.225 Sum_probs=52.4
Q ss_pred EEEEec-CccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeCCCCccc
Q 006671 418 RCVVSG-SGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKPWN 496 (636)
Q Consensus 418 rVaIqG-fGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~~~eil~ 496 (636)
+|+|.| +|.||+.+.+.|.+.+..++.+...... ...| ..+. +...--.....+.+ .|
T Consensus 2 kVaI~GAtG~iG~~llr~L~~~~~~~~~l~~~~s~--~~~g----------------~~l~-~~g~~i~v~~~~~~-~~- 60 (331)
T 2yv3_A 2 RVAVVGATGAVGREILKVLEARNFPLSELRLYASP--RSAG----------------VRLA-FRGEEIPVEPLPEG-PL- 60 (331)
T ss_dssp CEEEETTTSHHHHHHHHHHHHTTCCCSCCEEEECG--GGSS----------------CEEE-ETTEEEEEEECCSS-CC-
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCcEEEEEeecc--ccCC----------------CEEE-EcCceEEEEeCChh-hc-
Confidence 699999 9999999999999766543332210000 0001 0111 00000001111222 36
Q ss_pred cccceEecCCCcCccchhhHHHhhhcCceEEEeCCC
Q 006671 497 ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSN 532 (636)
Q Consensus 497 ~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgAN 532 (636)
+||++|-|+ +...+.+.++.+.+.||++|-=++-
T Consensus 61 -~~DvV~~a~-g~~~s~~~a~~~~~~G~~vId~s~~ 94 (331)
T 2yv3_A 61 -PVDLVLASA-GGGISRAKALVWAEGGALVVDNSSA 94 (331)
T ss_dssp -CCSEEEECS-HHHHHHHHHHHHHHTTCEEEECSSS
T ss_pred -CCCEEEECC-CccchHHHHHHHHHCCCEEEECCCc
Confidence 899999876 4556778888888888888866554
No 305
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=84.13 E-value=1.9 Score=44.70 Aligned_cols=32 Identities=22% Similarity=0.304 Sum_probs=28.3
Q ss_pred CCCcEEEEecCccHHHHHHHHHHHCCC-EEEEE
Q 006671 414 LKGLRCVVSGSGKIAMHVLEKLIAYGA-IPVSV 445 (636)
Q Consensus 414 l~GkrVaIqGfGNVG~~aAe~L~e~GA-kVVaV 445 (636)
-.|.+|+|.|.|.||..+++.+...|+ +|+++
T Consensus 192 ~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~ 224 (378)
T 3uko_A 192 EPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGI 224 (378)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEE
Confidence 468999999999999999999999999 66655
No 306
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=84.12 E-value=0.92 Score=40.96 Aligned_cols=30 Identities=23% Similarity=0.318 Sum_probs=27.4
Q ss_pred EEEEecCccHHHHHHHHHHHCCCEEEEEeCC
Q 006671 418 RCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (636)
Q Consensus 418 rVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs 448 (636)
.|+|+|.|-.|..+|..|.+.|.+ |.|-|.
T Consensus 4 dV~IIGaGpaGL~aA~~La~~G~~-V~v~Ek 33 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAAGHQ-VHLFDK 33 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCC-EEEECS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCC-EEEEEC
Confidence 599999999999999999999999 677775
No 307
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=84.11 E-value=1.2 Score=42.61 Aligned_cols=35 Identities=26% Similarity=0.379 Sum_probs=30.6
Q ss_pred CCCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEe
Q 006671 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (636)
Q Consensus 412 ~~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVS 446 (636)
.+++|++++|.| .|.+|.++++.|.+.|++|+.+.
T Consensus 3 ~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~ 38 (248)
T 2pnf_A 3 IKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITG 38 (248)
T ss_dssp CCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEe
Confidence 468899999997 69999999999999999976653
No 308
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=83.97 E-value=3.1 Score=44.99 Aligned_cols=31 Identities=13% Similarity=0.108 Sum_probs=26.5
Q ss_pred cEEEEecCccHHHHHHHHHHHC--CCEEEEEeCC
Q 006671 417 LRCVVSGSGKIAMHVLEKLIAY--GAIPVSVSDA 448 (636)
Q Consensus 417 krVaIqGfGNVG~~aAe~L~e~--GAkVVaVSDs 448 (636)
++|+|.|.|.||..+|..|.+. |..| .+.|.
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V-~~~d~ 38 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRV-TVVDV 38 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEE-EEECS
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEE-EEEEC
Confidence 5899999999999999999998 7885 45565
No 309
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=83.94 E-value=1.3 Score=43.19 Aligned_cols=35 Identities=29% Similarity=0.371 Sum_probs=30.4
Q ss_pred CCCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEe
Q 006671 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (636)
Q Consensus 412 ~~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVS 446 (636)
.+++||+++|.| .|.+|.++|+.|.+.|++|+.+.
T Consensus 3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~ 38 (263)
T 3ai3_A 3 MGISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVA 38 (263)
T ss_dssp CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEc
Confidence 468899999998 68999999999999999976553
No 310
>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*
Probab=83.80 E-value=2.2 Score=45.07 Aligned_cols=104 Identities=12% Similarity=0.165 Sum_probs=59.9
Q ss_pred CcEEEEec-CccHHHHHHHHHHHCC-CEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeCCCC
Q 006671 416 GLRCVVSG-SGKIAMHVLEKLIAYG-AIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAK 493 (636)
Q Consensus 416 GkrVaIqG-fGNVG~~aAe~L~e~G-AkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~~~e 493 (636)
..+|+|.| .|.||+.+.++|.+.- ..++.++.. ...|-.+.++ ...+. ...+....... ..+..+.+
T Consensus 7 ~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~-----~saGk~~~~~---~p~~~-~~~~~~~~~~~-~v~~~~~~- 75 (359)
T 4dpk_A 7 TLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGK-----GSVGKPYGEV---VRWQT-VGQVPKEIADM-EIKPTDPK- 75 (359)
T ss_dssp CEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEES-----TTTTSBHHHH---CCCCS-SSCCCHHHHTC-BCEECCGG-
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECc-----hhcCCChhHh---ccccc-ccccccccccc-eEEeCCHH-
Confidence 46899999 7999999999887753 577777554 3445443321 00000 00000000000 11111212
Q ss_pred ccccccceEecCCCcCccchhhHHHhhhcCceEEEeCCC
Q 006671 494 PWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSN 532 (636)
Q Consensus 494 il~~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgAN 532 (636)
.+ .+|||+|-|+ ....+.+-++.+.+.+|++|-=+|.
T Consensus 76 ~~-~~vDvvf~a~-p~~~s~~~a~~~~~~G~~vIDlSa~ 112 (359)
T 4dpk_A 76 LM-DDVDIIFSPL-PQGAAGPVEEQFAKEGFPVISNSPD 112 (359)
T ss_dssp GC-TTCCEEEECC-CTTTHHHHHHHHHHTTCEEEECSST
T ss_pred Hh-cCCCEEEECC-ChHHHHHHHHHHHHCCCEEEEcCCC
Confidence 23 3899999886 4556778888888889988876654
No 311
>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*
Probab=83.80 E-value=2.2 Score=45.07 Aligned_cols=104 Identities=12% Similarity=0.165 Sum_probs=60.1
Q ss_pred CcEEEEec-CccHHHHHHHHHHHCC-CEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeCCCC
Q 006671 416 GLRCVVSG-SGKIAMHVLEKLIAYG-AIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAK 493 (636)
Q Consensus 416 GkrVaIqG-fGNVG~~aAe~L~e~G-AkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~~~e 493 (636)
..+|+|.| .|.||+.+.++|.+.- ..++.++.. ...|-.+.++ ...+. ...+....... ..+..+.+
T Consensus 7 ~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~-----~saGk~~~~~---~p~~~-~~~~~~~~~~~-~v~~~~~~- 75 (359)
T 4dpl_A 7 TLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGK-----GSVGKPYGEV---VRWQT-VGQVPKEIADM-EIKPTDPK- 75 (359)
T ss_dssp CEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEES-----TTTTSBHHHH---CCCCS-SSCCCHHHHTC-BCEECCGG-
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECc-----hhcCCChhHh---ccccc-ccccccccccc-eEEeCCHH-
Confidence 46899999 7999999999887753 577777554 3445443321 00000 00000000000 11111222
Q ss_pred ccccccceEecCCCcCccchhhHHHhhhcCceEEEeCCC
Q 006671 494 PWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSN 532 (636)
Q Consensus 494 il~~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgAN 532 (636)
.+ .+|||+|-|+ ....+.+-++.+.+.+|++|-=+|.
T Consensus 76 ~~-~~vDvvf~a~-p~~~s~~~a~~~~~~G~~vIDlSa~ 112 (359)
T 4dpl_A 76 LM-DDVDIIFSPL-PQGAAGPVEEQFAKEGFPVISNSPD 112 (359)
T ss_dssp GC-TTCCEEEECC-CTTTHHHHHHHHHHTTCEEEECSST
T ss_pred Hh-cCCCEEEECC-ChHHHHHHHHHHHHCCCEEEEcCCC
Confidence 23 3899999986 4556778888888889998876654
No 312
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=83.67 E-value=1.8 Score=40.25 Aligned_cols=33 Identities=18% Similarity=0.262 Sum_probs=29.0
Q ss_pred CCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEe
Q 006671 414 LKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (636)
Q Consensus 414 l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVS 446 (636)
-.|++|+|.| .|.+|..+++.+...|++|+++.
T Consensus 37 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~ 70 (198)
T 1pqw_A 37 SPGERVLIHSATGGVGMAAVSIAKMIGARIYTTA 70 (198)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEE
T ss_pred CCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEe
Confidence 3689999999 79999999999999999976654
No 313
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=83.62 E-value=1.4 Score=44.02 Aligned_cols=36 Identities=25% Similarity=0.351 Sum_probs=31.6
Q ss_pred CCCCcEEEEecC-----------------ccHHHHHHHHHHHCCCEEEEEeCC
Q 006671 413 ELKGLRCVVSGS-----------------GKIAMHVLEKLIAYGAIPVSVSDA 448 (636)
Q Consensus 413 ~l~GkrVaIqGf-----------------GNVG~~aAe~L~e~GAkVVaVSDs 448 (636)
+|+|++|+|.|- |.+|..+|+.|.+.|++|+.++..
T Consensus 5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~ 57 (226)
T 1u7z_A 5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGP 57 (226)
T ss_dssp TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECS
T ss_pred CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECC
Confidence 589999999986 799999999999999998777543
No 314
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=83.61 E-value=1.5 Score=44.06 Aligned_cols=37 Identities=24% Similarity=0.328 Sum_probs=31.7
Q ss_pred CCCCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEeC
Q 006671 411 NKELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSD 447 (636)
Q Consensus 411 g~~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVSD 447 (636)
+.+|+||+++|.| .+-+|..+|+.|.+.|++|+.+..
T Consensus 2 ~~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r 39 (258)
T 4gkb_A 2 DLNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFAR 39 (258)
T ss_dssp CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEEC
Confidence 4689999999998 577999999999999999765554
No 315
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=83.56 E-value=1.4 Score=43.14 Aligned_cols=37 Identities=19% Similarity=0.190 Sum_probs=32.3
Q ss_pred CCCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEeCC
Q 006671 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSDA 448 (636)
Q Consensus 412 ~~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVSDs 448 (636)
.+++||+++|.| .|-+|.++|+.|.+.|++|+.+.+.
T Consensus 4 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~ 41 (259)
T 3edm_A 4 QRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNG 41 (259)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECS
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCC
Confidence 368899999998 5789999999999999998877665
No 316
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=83.55 E-value=1.4 Score=42.88 Aligned_cols=35 Identities=31% Similarity=0.278 Sum_probs=30.2
Q ss_pred CCCCCcEEEEecC-cc--HHHHHHHHHHHCCCEEEEEe
Q 006671 412 KELKGLRCVVSGS-GK--IAMHVLEKLIAYGAIPVSVS 446 (636)
Q Consensus 412 ~~l~GkrVaIqGf-GN--VG~~aAe~L~e~GAkVVaVS 446 (636)
.+++|++++|.|. |. +|..+|+.|.+.|++|+.+.
T Consensus 3 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~ 40 (266)
T 3oig_A 3 FSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTY 40 (266)
T ss_dssp SCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEE
T ss_pred cccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEec
Confidence 4789999999995 66 99999999999999976553
No 317
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=83.44 E-value=2.3 Score=43.65 Aligned_cols=105 Identities=15% Similarity=0.250 Sum_probs=61.7
Q ss_pred cEEEEecC-ccHHHHHHHHHHHCCCEEEEEeCCC--CceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeCCCC
Q 006671 417 LRCVVSGS-GKIAMHVLEKLIAYGAIPVSVSDAK--GYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAK 493 (636)
Q Consensus 417 krVaIqGf-GNVG~~aAe~L~e~GAkVVaVSDs~--G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~~~e 493 (636)
.+++|+|. |+.|+..++.|.+.|.++|+-.+.. |.-+ .|+ .-| +.. ++
T Consensus 14 ~~v~V~Gasg~~G~~~~~~l~~~g~~~V~~VnP~~~g~~i--~G~------------------~vy----~sl-----~e 64 (294)
T 2yv1_A 14 TKAIVQGITGRQGSFHTKKMLECGTKIVGGVTPGKGGQNV--HGV------------------PVF----DTV-----KE 64 (294)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCEEEEECTTCTTCEE--TTE------------------EEE----SSH-----HH
T ss_pred CEEEEECCCCCHHHHHHHHHHhCCCeEEEEeCCCCCCceE--CCE------------------eee----CCH-----HH
Confidence 46888897 9999999999999999877555542 1000 011 111 111 11
Q ss_pred cc-ccccceEecCCCcCccchhhHHHhhhcCceEEEeCC-CCCCC--HHHHHHHHHCCceEe
Q 006671 494 PW-NERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGS-NMPCT--PEAVDVLKKANVLIA 551 (636)
Q Consensus 494 il-~~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgA-N~P~T--~eA~~iL~~rGIlvi 551 (636)
+. ..++|+.+-|... ....+.+...++.+++.|+..+ ..+.+ .+..++.++.|+.++
T Consensus 65 l~~~~~~Dv~ii~vp~-~~~~~~v~ea~~~Gi~~vVi~t~G~~~~~~~~l~~~A~~~gi~vi 125 (294)
T 2yv1_A 65 AVKETDANASVIFVPA-PFAKDAVFEAIDAGIELIVVITEHIPVHDTMEFVNYAEDVGVKII 125 (294)
T ss_dssp HHHHHCCCEEEECCCH-HHHHHHHHHHHHTTCSEEEECCSCCCHHHHHHHHHHHHHHTCEEE
T ss_pred HhhcCCCCEEEEccCH-HHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCCEEE
Confidence 11 1267888866543 3455666666778999555443 33322 134566678898554
No 318
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=83.37 E-value=1.3 Score=42.67 Aligned_cols=35 Identities=29% Similarity=0.348 Sum_probs=30.6
Q ss_pred CCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEeC
Q 006671 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSD 447 (636)
Q Consensus 413 ~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVSD 447 (636)
+++||+++|.| .|-+|.++|+.|.+.|++|+.+.-
T Consensus 2 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r 37 (247)
T 3lyl_A 2 SLNEKVALVTGASRGIGFEVAHALASKGATVVGTAT 37 (247)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC
Confidence 57899999998 689999999999999999776644
No 319
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=83.32 E-value=1.5 Score=41.97 Aligned_cols=35 Identities=37% Similarity=0.381 Sum_probs=30.5
Q ss_pred CCCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEe
Q 006671 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (636)
Q Consensus 412 ~~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVS 446 (636)
.+++|++++|.| .|-+|.++++.|.+.|++|+.+.
T Consensus 3 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~ 38 (244)
T 3d3w_A 3 LFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVS 38 (244)
T ss_dssp CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred cccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe
Confidence 468899999998 49999999999999999976654
No 320
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=83.16 E-value=1.5 Score=42.40 Aligned_cols=35 Identities=23% Similarity=0.304 Sum_probs=30.5
Q ss_pred CCCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEe
Q 006671 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (636)
Q Consensus 412 ~~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVS 446 (636)
.++++++++|.| .|.+|.++|+.|.+.|++|+.++
T Consensus 3 ~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~ 38 (264)
T 2pd6_A 3 NRLRSALALVTGAGSGIGRAVSVRLAGEGATVAACD 38 (264)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEe
Confidence 468899999997 69999999999999999976653
No 321
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=82.87 E-value=1.4 Score=43.38 Aligned_cols=33 Identities=36% Similarity=0.412 Sum_probs=29.6
Q ss_pred CCCCcEEEEec---CccHHHHHHHHHHHCCCEEEEE
Q 006671 413 ELKGLRCVVSG---SGKIAMHVLEKLIAYGAIPVSV 445 (636)
Q Consensus 413 ~l~GkrVaIqG---fGNVG~~aAe~L~e~GAkVVaV 445 (636)
+++||+++|.| .|.+|..+|+.|.+.|++|+.+
T Consensus 4 ~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~ 39 (269)
T 2h7i_A 4 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLT 39 (269)
T ss_dssp TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEE
T ss_pred ccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEE
Confidence 57899999999 6999999999999999997654
No 322
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=82.78 E-value=1.4 Score=42.39 Aligned_cols=34 Identities=21% Similarity=0.321 Sum_probs=30.1
Q ss_pred CCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEe
Q 006671 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (636)
Q Consensus 413 ~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVS 446 (636)
++++++++|.| .|.+|+++|+.|.+.|++|+.++
T Consensus 10 ~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~ 44 (260)
T 3awd_A 10 RLDNRVAIVTGGAQNIGLACVTALAEAGARVIIAD 44 (260)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEe
Confidence 57899999997 69999999999999999976654
No 323
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=82.75 E-value=1.4 Score=42.20 Aligned_cols=35 Identities=23% Similarity=0.349 Sum_probs=30.5
Q ss_pred CCCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEe
Q 006671 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (636)
Q Consensus 412 ~~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVS 446 (636)
.+++|++++|.| .|.+|+++|+.|.+.|++|+.+.
T Consensus 7 ~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~ 42 (254)
T 2wsb_A 7 FRLDGACAAVTGAGSGIGLEICRAFAASGARLILID 42 (254)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEe
Confidence 468899999997 69999999999999999976654
No 324
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=82.70 E-value=0.97 Score=46.77 Aligned_cols=32 Identities=19% Similarity=0.215 Sum_probs=28.9
Q ss_pred CcEEEEecCccHHHHHHHHHHHCCCEEEEEeC
Q 006671 416 GLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSD 447 (636)
Q Consensus 416 GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSD 447 (636)
|++|+|.|.|.||..+++.+...|++|+++.-
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~ 212 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYGLEVWMANR 212 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHTCEEEEEES
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeC
Confidence 99999999999999999999999999776643
No 325
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=82.69 E-value=1.5 Score=40.14 Aligned_cols=33 Identities=12% Similarity=0.192 Sum_probs=28.7
Q ss_pred CCcEEEEecC-ccHHHHHHHHHHHCCCEEEEEeC
Q 006671 415 KGLRCVVSGS-GKIAMHVLEKLIAYGAIPVSVSD 447 (636)
Q Consensus 415 ~GkrVaIqGf-GNVG~~aAe~L~e~GAkVVaVSD 447 (636)
.+++|+|.|. |.+|+++++.|.+.|.+|++++-
T Consensus 2 ~~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r 35 (206)
T 1hdo_A 2 AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVR 35 (206)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEe
Confidence 3478999986 99999999999999999877764
No 326
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=82.58 E-value=1.4 Score=44.28 Aligned_cols=36 Identities=14% Similarity=0.314 Sum_probs=30.7
Q ss_pred CCCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEeC
Q 006671 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSD 447 (636)
Q Consensus 412 ~~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVSD 447 (636)
.+|+||+++|.| .+-+|..+|+.|.+.|++|+.+.-
T Consensus 7 ~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r 43 (261)
T 4h15_A 7 LNLRGKRALITAGTKGAGAATVSLFLELGAQVLTTAR 43 (261)
T ss_dssp CCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred cCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEEC
Confidence 379999999998 567999999999999999765543
No 327
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=82.45 E-value=1.9 Score=43.39 Aligned_cols=34 Identities=21% Similarity=0.146 Sum_probs=30.8
Q ss_pred CCCCcEEEEecCccHHHHHHHHHHHCCCEEEEEe
Q 006671 413 ELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVS 446 (636)
Q Consensus 413 ~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVS 446 (636)
--.|.+|+|.|.|.||..+++.+...|++|+++.
T Consensus 140 ~~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~ 173 (315)
T 3goh_A 140 LTKQREVLIVGFGAVNNLLTQMLNNAGYVVDLVS 173 (315)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEE
Confidence 3478999999999999999999999999988876
No 328
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=82.36 E-value=1.6 Score=42.18 Aligned_cols=34 Identities=26% Similarity=0.290 Sum_probs=30.0
Q ss_pred CCCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEE
Q 006671 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (636)
Q Consensus 412 ~~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaV 445 (636)
.+++|++++|.| .|.+|.++|+.|.+.|++|+.+
T Consensus 5 ~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~ 39 (253)
T 3qiv_A 5 MRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVA 39 (253)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEE
Confidence 468899999998 5899999999999999996654
No 329
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=82.20 E-value=1.7 Score=42.46 Aligned_cols=34 Identities=21% Similarity=0.199 Sum_probs=29.9
Q ss_pred CCCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEE
Q 006671 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (636)
Q Consensus 412 ~~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaV 445 (636)
.+++||+++|.| .|.+|.++|+.|.+.|++|+.+
T Consensus 3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~ 37 (260)
T 2z1n_A 3 LGIQGKLAVVTAGSSGLGFASALELARNGARLLLF 37 (260)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEE
Confidence 457899999998 6899999999999999997655
No 330
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=82.11 E-value=2.3 Score=44.67 Aligned_cols=102 Identities=13% Similarity=0.198 Sum_probs=61.2
Q ss_pred cEEEEec-CccHHHHHHHHHHH-CCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceee-CCCC
Q 006671 417 LRCVVSG-SGKIAMHVLEKLIA-YGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYY-DEAK 493 (636)
Q Consensus 417 krVaIqG-fGNVG~~aAe~L~e-~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i-~~~e 493 (636)
.+|+|.| .|.||+.+.+.|.+ -...++++..+++. ...|-.+.++ +..-++ ..++ ..+.. +.++
T Consensus 5 ~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~--~saGk~~~~~-----~p~~~~-~~~~-----~v~~~~~~~~ 71 (337)
T 3dr3_A 5 LNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQS--NDAGKLISDL-----HPQLKG-IVEL-----PLQPMSDISE 71 (337)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTC--TTTTSBHHHH-----CGGGTT-TCCC-----BEEEESSGGG
T ss_pred eEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCch--hhcCCchHHh-----CccccC-ccce-----eEeccCCHHH
Confidence 5899999 69999999999988 45677777554211 1334333221 000000 0010 01111 1122
Q ss_pred ccccccceEecCCCcCccchhhHHHhhhcCceEEEeCCCC
Q 006671 494 PWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNM 533 (636)
Q Consensus 494 il~~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgAN~ 533 (636)
+..+|||+|-|. ....+.+-++.+.+.+|++|-=+|..
T Consensus 72 -~~~~~Dvvf~a~-p~~~s~~~~~~~~~~g~~vIDlSa~f 109 (337)
T 3dr3_A 72 -FSPGVDVVFLAT-AHEVSHDLAPQFLEAGCVVFDLSGAF 109 (337)
T ss_dssp -TCTTCSEEEECS-CHHHHHHHHHHHHHTTCEEEECSSTT
T ss_pred -HhcCCCEEEECC-ChHHHHHHHHHHHHCCCEEEEcCCcc
Confidence 324899999775 56668888888888899998766653
No 331
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=82.07 E-value=4.2 Score=42.02 Aligned_cols=115 Identities=16% Similarity=0.149 Sum_probs=67.9
Q ss_pred CCcEEEEecCccHHHHHHHHHHH-CCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceeeCCCC
Q 006671 415 KGLRCVVSGSGKIAMHVLEKLIA-YGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAK 493 (636)
Q Consensus 415 ~GkrVaIqGfGNVG~~aAe~L~e-~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i~~~e 493 (636)
..+++.|.|.|..|...++.|.+ .+.+-|.|.|.+ ..+++ ..++....+ + .....+.++
T Consensus 120 ~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~---------~a~~l--a~~l~~~~g-~--------~~~~~~~~e 179 (313)
T 3hdj_A 120 RSSVLGLFGAGTQGAEHAAQLSARFALEAILVHDPY---------ASPEI--LERIGRRCG-V--------PARMAAPAD 179 (313)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTT---------CCHHH--HHHHHHHHT-S--------CEEECCHHH
T ss_pred CCcEEEEECccHHHHHHHHHHHHhCCCcEEEEECCc---------HHHHH--HHHHHHhcC-C--------eEEEeCHHH
Confidence 56899999999999999999887 466667777764 22232 111111111 1 111111111
Q ss_pred ccccccceEecCCCcC--ccchhhHHHhhhcCceEEEeCCCCCCCHHHHHHHHHCCceEeccc
Q 006671 494 PWNERCDVAFPCASQN--EIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANVLIAPAM 554 (636)
Q Consensus 494 il~~~cDIliPcA~~n--~It~enA~~l~~~~akiVvEgAN~P~T~eA~~iL~~rGIlviPD~ 554 (636)
.. .+|||++-|.... .++.+ .++.++.++.=|+..|-..|.+..+..++-.++-|.
T Consensus 180 av-~~aDIVi~aT~s~~pvl~~~----~l~~G~~V~~vGs~~p~~~El~~~~~~~a~~v~vD~ 237 (313)
T 3hdj_A 180 IA-AQADIVVTATRSTTPLFAGQ----ALRAGAFVGAIGSSLPHTRELDDEALRRARAVVVEW 237 (313)
T ss_dssp HH-HHCSEEEECCCCSSCSSCGG----GCCTTCEEEECCCSSTTCCCCCHHHHHHCSEEEESC
T ss_pred HH-hhCCEEEEccCCCCcccCHH----HcCCCcEEEECCCCCCchhhcCHHHHhcCCEEEECC
Confidence 11 3799999877543 33322 235589999999998866665544545553444453
No 332
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2
Probab=82.00 E-value=1.6 Score=42.54 Aligned_cols=35 Identities=20% Similarity=0.113 Sum_probs=30.3
Q ss_pred CCCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEe
Q 006671 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (636)
Q Consensus 412 ~~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVS 446 (636)
.+++||+++|.| .|.+|.++|+.|.+.|++|+.++
T Consensus 15 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~ 50 (249)
T 1o5i_A 15 LGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICA 50 (249)
T ss_dssp -CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred hccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEc
Confidence 578999999998 58999999999999999976553
No 333
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=81.95 E-value=1.5 Score=42.86 Aligned_cols=36 Identities=17% Similarity=0.134 Sum_probs=29.5
Q ss_pred CCCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEeCC
Q 006671 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSDA 448 (636)
Q Consensus 412 ~~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVSDs 448 (636)
.+++|++++|.| .|-+|..+|+.|.+.|++|+.+ |.
T Consensus 3 ~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~-~r 39 (252)
T 3h7a_A 3 LTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAG-RR 39 (252)
T ss_dssp --CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEE-ES
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEE-eC
Confidence 468899999998 6789999999999999996654 44
No 334
>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*
Probab=81.95 E-value=1.3 Score=44.55 Aligned_cols=34 Identities=21% Similarity=0.249 Sum_probs=28.4
Q ss_pred CCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEeC
Q 006671 414 LKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSD 447 (636)
Q Consensus 414 l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVSD 447 (636)
+++++|+|.| .|-+|+++++.|.+.|++|+++..
T Consensus 3 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r 37 (337)
T 2c29_D 3 SQSETVCVTGASGFIGSWLVMRLLERGYTVRATVR 37 (337)
T ss_dssp ---CEEEETTTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEC
Confidence 4789999999 899999999999999999887654
No 335
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=81.88 E-value=1.7 Score=41.99 Aligned_cols=35 Identities=29% Similarity=0.566 Sum_probs=30.7
Q ss_pred CCCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEe
Q 006671 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (636)
Q Consensus 412 ~~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVS 446 (636)
.+++|++++|.| .|.+|.++|+.|.+.|++|+.+.
T Consensus 8 ~~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~ 43 (265)
T 2o23_A 8 RSVKGLVAVITGGASGLGLATAERLVGQGASAVLLD 43 (265)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEe
Confidence 468899999998 69999999999999999977654
No 336
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=81.83 E-value=1.3 Score=44.68 Aligned_cols=36 Identities=14% Similarity=0.348 Sum_probs=32.0
Q ss_pred CCCCCcEEEEecC-ccHHHHHHHHHHHCCCEEEEEeC
Q 006671 412 KELKGLRCVVSGS-GKIAMHVLEKLIAYGAIPVSVSD 447 (636)
Q Consensus 412 ~~l~GkrVaIqGf-GNVG~~aAe~L~e~GAkVVaVSD 447 (636)
.+++|++|+|.|. |-+|+++++.|.+.|++|+++.-
T Consensus 16 ~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r 52 (330)
T 2pzm_A 16 PRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDN 52 (330)
T ss_dssp STTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEEC
T ss_pred ccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEEC
Confidence 5789999999985 99999999999999999877654
No 337
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A
Probab=81.73 E-value=1.7 Score=46.20 Aligned_cols=90 Identities=19% Similarity=0.192 Sum_probs=54.2
Q ss_pred CcEEEEec-CccHHHHHHHHHHHCCC---EEEEEeCC--CCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceee
Q 006671 416 GLRCVVSG-SGKIAMHVLEKLIAYGA---IPVSVSDA--KGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYY 489 (636)
Q Consensus 416 GkrVaIqG-fGNVG~~aAe~L~e~GA---kVVaVSDs--~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i 489 (636)
..+|+|.| .|.||+-+.+.|.+.+. .++.++.+ .|--+.-.|. +. ..+.+
T Consensus 2 ~~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~~saG~~~~~~~~-------------------~~-----~~~~~ 57 (366)
T 3pwk_A 2 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLKFKDQ-------------------DI-----TIEET 57 (366)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECTTTTTCEEEETTE-------------------EE-----EEEEC
T ss_pred CcEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEccccCCCcceecCC-------------------Cc-----eEeeC
Confidence 35899999 79999999999998654 44555443 2222210000 00 01111
Q ss_pred CCCCccccccceEecCCCcCccchhhHHHhhhcCceEEEeCCC
Q 006671 490 DEAKPWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSN 532 (636)
Q Consensus 490 ~~~eil~~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgAN 532 (636)
+.+ .+ .+|||+|-|+ +...+.+.++.+.+.||++|-=+|.
T Consensus 58 ~~~-~~-~~~Dvvf~a~-~~~~s~~~a~~~~~~G~~vIDlSa~ 97 (366)
T 3pwk_A 58 TET-AF-EGVDIALFSA-GSSTSAKYAPYAVKAGVVVVDNTSY 97 (366)
T ss_dssp CTT-TT-TTCSEEEECS-CHHHHHHHHHHHHHTTCEEEECSST
T ss_pred CHH-Hh-cCCCEEEECC-ChHhHHHHHHHHHHCCCEEEEcCCc
Confidence 212 22 3788888887 4556777777777778887765553
No 338
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=81.61 E-value=1.6 Score=41.88 Aligned_cols=34 Identities=21% Similarity=0.368 Sum_probs=30.0
Q ss_pred CCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEe
Q 006671 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (636)
Q Consensus 413 ~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVS 446 (636)
+++|++++|.| .|.+|.++++.|.+.|++|+.+.
T Consensus 3 ~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~ 37 (251)
T 1zk4_A 3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITG 37 (251)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEe
Confidence 57899999998 69999999999999999976654
No 339
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=81.61 E-value=1.4 Score=44.32 Aligned_cols=35 Identities=29% Similarity=0.394 Sum_probs=30.8
Q ss_pred CCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEeCC
Q 006671 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSDA 448 (636)
Q Consensus 413 ~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVSDs 448 (636)
+|+||+++|.| .+-+|..+|+.|.+.|++| .++|.
T Consensus 6 ~L~gKvalVTGas~GIG~aia~~la~~Ga~V-vi~~~ 41 (255)
T 4g81_D 6 DLTGKTALVTGSARGLGFAYAEGLAAAGARV-ILNDI 41 (255)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEE-EECCS
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEE-EEEEC
Confidence 79999999998 5779999999999999995 56665
No 340
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=81.54 E-value=2.6 Score=43.41 Aligned_cols=35 Identities=17% Similarity=0.208 Sum_probs=31.9
Q ss_pred CCCcEEEEecC-ccHHHHHHHHHHHCCCEEEEEeCC
Q 006671 414 LKGLRCVVSGS-GKIAMHVLEKLIAYGAIPVSVSDA 448 (636)
Q Consensus 414 l~GkrVaIqGf-GNVG~~aAe~L~e~GAkVVaVSDs 448 (636)
-.|.+|+|.|. |.||..+++++...|+++|+++++
T Consensus 166 ~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~ 201 (357)
T 1zsy_A 166 QPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRD 201 (357)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECC
T ss_pred CCCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecC
Confidence 36899999997 999999999999999999999876
No 341
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=81.51 E-value=1.8 Score=42.08 Aligned_cols=35 Identities=23% Similarity=0.294 Sum_probs=30.2
Q ss_pred CCCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEe
Q 006671 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (636)
Q Consensus 412 ~~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVS 446 (636)
.+++|++++|.| .|.+|.++|+.|.+.|++|+.+.
T Consensus 3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~ 38 (249)
T 2ew8_A 3 QRLKDKLAVITGGANGIGRAIAERFAVEGADIAIAD 38 (249)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEc
Confidence 357899999998 68999999999999999976553
No 342
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=81.45 E-value=1.7 Score=41.80 Aligned_cols=35 Identities=29% Similarity=0.282 Sum_probs=30.2
Q ss_pred CCCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEe
Q 006671 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (636)
Q Consensus 412 ~~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVS 446 (636)
..++|++++|.| .|.+|.++|+.|.+.|++|+.+.
T Consensus 10 ~~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~ 45 (247)
T 3i1j_A 10 ELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLG 45 (247)
T ss_dssp TTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred ccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEe
Confidence 358999999998 58999999999999999976543
No 343
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=81.43 E-value=1.9 Score=44.58 Aligned_cols=108 Identities=10% Similarity=0.075 Sum_probs=63.3
Q ss_pred CCCcEEEEe-cC-ccHHHHHHHHHHHCCCEEEEEeCCC--CceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceee
Q 006671 414 LKGLRCVVS-GS-GKIAMHVLEKLIAYGAIPVSVSDAK--GYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYY 489 (636)
Q Consensus 414 l~GkrVaIq-Gf-GNVG~~aAe~L~e~GAkVVaVSDs~--G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i 489 (636)
+..++++|+ |+ |+.|+..++.|.+.|.++|...+.+ |.-+ .|+ .-| +..
T Consensus 11 ~~~~siaVV~Gasg~~G~~~~~~l~~~G~~~v~~VnP~~~g~~i--~G~------------------~vy----~sl--- 63 (305)
T 2fp4_A 11 VDKNTKVICQGFTGKQGTFHSQQALEYGTNLVGGTTPGKGGKTH--LGL------------------PVF----NTV--- 63 (305)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTCEE--TTE------------------EEE----SSH---
T ss_pred hCCCcEEEEECCCCCHHHHHHHHHHHCCCcEEEEeCCCcCcceE--CCe------------------eee----chH---
Confidence 455666665 98 9999999999999999977555542 1000 111 111 111
Q ss_pred CCCCcc-ccccceEecCCCcCccchhhHHHhhhcCceEEEeCCCCC-CCH--HHHHHHHHC-CceEe
Q 006671 490 DEAKPW-NERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMP-CTP--EAVDVLKKA-NVLIA 551 (636)
Q Consensus 490 ~~~eil-~~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgAN~P-~T~--eA~~iL~~r-GIlvi 551 (636)
+++. ..++|+.+-|.. .....+.+..+++.+++.|+.-+-+- ... +..+..+++ |+.++
T Consensus 64 --~el~~~~~vD~avI~vP-~~~~~~~~~e~i~~Gi~~iv~~t~G~~~~~~~~l~~~a~~~~gi~li 127 (305)
T 2fp4_A 64 --KEAKEQTGATASVIYVP-PPFAAAAINEAIDAEVPLVVCITEGIPQQDMVRVKHRLLRQGKTRLI 127 (305)
T ss_dssp --HHHHHHHCCCEEEECCC-HHHHHHHHHHHHHTTCSEEEECCCCCCHHHHHHHHHHHTTCSSCEEE
T ss_pred --HHhhhcCCCCEEEEecC-HHHHHHHHHHHHHCCCCEEEEECCCCChHHHHHHHHHHHhcCCcEEE
Confidence 1111 125677765543 23445666666777888866555443 333 456777788 88765
No 344
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=81.39 E-value=1.7 Score=43.05 Aligned_cols=37 Identities=24% Similarity=0.278 Sum_probs=30.5
Q ss_pred CCCCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEeCC
Q 006671 411 NKELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSDA 448 (636)
Q Consensus 411 g~~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVSDs 448 (636)
..+++||+++|.| .|-+|.++|+.|.+.|++|+.+ |.
T Consensus 6 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~-~r 43 (281)
T 3svt_A 6 QLSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIV-GR 43 (281)
T ss_dssp --CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ES
T ss_pred ccCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEE-eC
Confidence 3578999999998 6899999999999999996654 44
No 345
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=81.27 E-value=1.3 Score=44.32 Aligned_cols=41 Identities=20% Similarity=0.199 Sum_probs=26.5
Q ss_pred HHHHhCCCCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEe
Q 006671 406 ILADMNKELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (636)
Q Consensus 406 ~l~~~g~~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVS 446 (636)
++.....+++||+++|.| .|-+|.++|+.|.+.|++|+.+.
T Consensus 23 ~~~~~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~ 64 (281)
T 4dry_A 23 MMAQGKGSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITG 64 (281)
T ss_dssp -----------CEEEETTTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred cccccCCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEE
Confidence 333334578999999998 58899999999999999966543
No 346
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=81.27 E-value=1.4 Score=43.87 Aligned_cols=34 Identities=18% Similarity=0.292 Sum_probs=28.3
Q ss_pred CCCcEEEEecC-ccHHHHHHHHHHHCCCEEEEEeC
Q 006671 414 LKGLRCVVSGS-GKIAMHVLEKLIAYGAIPVSVSD 447 (636)
Q Consensus 414 l~GkrVaIqGf-GNVG~~aAe~L~e~GAkVVaVSD 447 (636)
++|++|+|.|. |-+|+++++.|.+.|++|+++.-
T Consensus 1 m~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r 35 (345)
T 2z1m_A 1 MSGKRALITGIRGQDGAYLAKLLLEKGYEVYGADR 35 (345)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEEC
Confidence 35789999985 99999999999999999776643
No 347
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=81.26 E-value=1.9 Score=42.32 Aligned_cols=34 Identities=26% Similarity=0.289 Sum_probs=29.9
Q ss_pred CCCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEE
Q 006671 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (636)
Q Consensus 412 ~~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaV 445 (636)
.+++|++++|.| .|.+|.++|+.|.+.|++|+.+
T Consensus 3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~ 37 (260)
T 1nff_A 3 GRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFG 37 (260)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEE
Confidence 357899999998 6899999999999999997655
No 348
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=81.25 E-value=1.6 Score=42.28 Aligned_cols=36 Identities=25% Similarity=0.189 Sum_probs=31.6
Q ss_pred CCCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEeC
Q 006671 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSD 447 (636)
Q Consensus 412 ~~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVSD 447 (636)
.+++|++|+|.| .|.+|.++++.|.+.|++|+.+..
T Consensus 17 ~~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r 53 (274)
T 1ja9_A 17 KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYG 53 (274)
T ss_dssp CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcC
Confidence 468899999998 699999999999999999877654
No 349
>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A
Probab=81.20 E-value=2.3 Score=44.78 Aligned_cols=90 Identities=14% Similarity=0.166 Sum_probs=54.0
Q ss_pred CcEEEEec-CccHHHHHHHHHHHCC---CEEEEEeCC--CCceeCCCCCCHHHHHHHHHHHhhcCCccccccccCCceee
Q 006671 416 GLRCVVSG-SGKIAMHVLEKLIAYG---AIPVSVSDA--KGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYY 489 (636)
Q Consensus 416 GkrVaIqG-fGNVG~~aAe~L~e~G---AkVVaVSDs--~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~p~a~~i 489 (636)
|.+|+|.| .|.||+-+.+.|.+.. ..++.++.. .|--+.=. + .++ ..+..
T Consensus 1 ~~~VaIvGatG~vG~el~~lL~~h~fp~~el~~~~s~~~aG~~~~~~-----------------~--~~~-----~~~~~ 56 (344)
T 3tz6_A 1 GLSIGIVGATGQVGQVMRTLLDERDFPASAVRFFASARSQGRKLAFR-----------------G--QEI-----EVEDA 56 (344)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTSSCEEEET-----------------T--EEE-----EEEET
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCceEEEEEECcccCCCceeec-----------------C--Cce-----EEEeC
Confidence 56899999 7999999999999873 356666543 22221100 0 000 01111
Q ss_pred CCCCccccccceEecCCCcCccchhhHHHhhhcCceEEEeCCC
Q 006671 490 DEAKPWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSN 532 (636)
Q Consensus 490 ~~~eil~~~cDIliPcA~~n~It~enA~~l~~~~akiVvEgAN 532 (636)
+. +.| .+|||+|-|+. ...+.+-++.+.+.+|++|-=++.
T Consensus 57 ~~-~~~-~~~Dvvf~a~~-~~~s~~~a~~~~~~G~~vID~Sa~ 96 (344)
T 3tz6_A 57 ET-ADP-SGLDIALFSAG-SAMSKVQAPRFAAAGVTVIDNSSA 96 (344)
T ss_dssp TT-SCC-TTCSEEEECSC-HHHHHHHHHHHHHTTCEEEECSST
T ss_pred CH-HHh-ccCCEEEECCC-hHHHHHHHHHHHhCCCEEEECCCc
Confidence 22 123 37888888764 445677777777778877765553
No 350
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=81.18 E-value=3 Score=42.29 Aligned_cols=37 Identities=22% Similarity=0.395 Sum_probs=32.2
Q ss_pred CCCCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeCC
Q 006671 412 KELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (636)
Q Consensus 412 ~~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs 448 (636)
.-..|.+|+|.|.|.||..+++.+...|++++.++|.
T Consensus 157 ~~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~ 193 (346)
T 4a2c_A 157 QGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDI 193 (346)
T ss_dssp TCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEES
T ss_pred ccCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEec
Confidence 3457899999999999999999999999987777775
No 351
>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*
Probab=81.15 E-value=2 Score=42.77 Aligned_cols=35 Identities=26% Similarity=0.316 Sum_probs=30.7
Q ss_pred CCCCCcEEEEecC---ccHHHHHHHHHHHCCCEEEEEe
Q 006671 412 KELKGLRCVVSGS---GKIAMHVLEKLIAYGAIPVSVS 446 (636)
Q Consensus 412 ~~l~GkrVaIqGf---GNVG~~aAe~L~e~GAkVVaVS 446 (636)
.+++||+++|.|. |-+|.++|+.|.+.|++|+.+.
T Consensus 4 ~~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~ 41 (297)
T 1d7o_A 4 IDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGT 41 (297)
T ss_dssp CCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEE
T ss_pred cccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEee
Confidence 4688999999996 7899999999999999977653
No 352
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=81.12 E-value=2.5 Score=43.22 Aligned_cols=32 Identities=25% Similarity=0.304 Sum_probs=28.9
Q ss_pred CCcEEEEecCccHHHHHHHHHHHC--CCEEEEEe
Q 006671 415 KGLRCVVSGSGKIAMHVLEKLIAY--GAIPVSVS 446 (636)
Q Consensus 415 ~GkrVaIqGfGNVG~~aAe~L~e~--GAkVVaVS 446 (636)
.|.+|+|.|.|.||..+++.+... |++|+++.
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~ 203 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKNITIVGIS 203 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEe
Confidence 899999999999999999999999 99966654
No 353
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=81.09 E-value=1.6 Score=42.27 Aligned_cols=36 Identities=14% Similarity=0.224 Sum_probs=29.7
Q ss_pred CCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEeCC
Q 006671 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSDA 448 (636)
Q Consensus 413 ~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVSDs 448 (636)
+++|++++|.| .|-+|.++|+.|.+.|+++|.+.+.
T Consensus 2 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r 38 (254)
T 1sby_A 2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDR 38 (254)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEES
T ss_pred CCCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEec
Confidence 57899999997 6899999999999999973444444
No 354
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=81.07 E-value=1.8 Score=42.16 Aligned_cols=35 Identities=26% Similarity=0.319 Sum_probs=29.9
Q ss_pred CCCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEe
Q 006671 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (636)
Q Consensus 412 ~~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVS 446 (636)
.+++||+++|.| .|-+|.++|+.|.+.|++|+.+.
T Consensus 3 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~ 38 (257)
T 3tpc_A 3 MQLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLD 38 (257)
T ss_dssp -CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 468899999998 58999999999999999976554
No 355
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=81.00 E-value=2 Score=42.73 Aligned_cols=35 Identities=23% Similarity=0.241 Sum_probs=31.2
Q ss_pred CCCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEe
Q 006671 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (636)
Q Consensus 412 ~~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVS 446 (636)
.+++||+++|.| .|-+|.++|+.|.+.|++|+.+.
T Consensus 27 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~ 62 (273)
T 3uf0_A 27 FSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWG 62 (273)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEc
Confidence 478999999998 58899999999999999987665
No 356
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=80.97 E-value=1.9 Score=41.86 Aligned_cols=36 Identities=17% Similarity=0.227 Sum_probs=31.0
Q ss_pred CCCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEeC
Q 006671 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSD 447 (636)
Q Consensus 412 ~~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVSD 447 (636)
.+++|++++|.| .|.+|.++|+.|.+.|++|+.++-
T Consensus 3 m~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r 39 (250)
T 2fwm_X 3 MDFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQ 39 (250)
T ss_dssp CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 357899999998 699999999999999999776643
No 357
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=80.95 E-value=1.9 Score=42.93 Aligned_cols=35 Identities=14% Similarity=0.209 Sum_probs=30.5
Q ss_pred CCCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEe
Q 006671 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (636)
Q Consensus 412 ~~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVS 446 (636)
.+++||+++|.| .|-+|.++|+.|.+.|++|+.+.
T Consensus 12 ~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~ 47 (291)
T 3rd5_A 12 PSFAQRTVVITGANSGLGAVTARELARRGATVIMAV 47 (291)
T ss_dssp CCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEE
Confidence 468999999998 58899999999999999976553
No 358
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=80.85 E-value=1.3 Score=43.52 Aligned_cols=36 Identities=25% Similarity=0.343 Sum_probs=29.3
Q ss_pred CCCCcEEEEecC-ccHHHHHHHHHHHCCCEEEEEeCC
Q 006671 413 ELKGLRCVVSGS-GKIAMHVLEKLIAYGAIPVSVSDA 448 (636)
Q Consensus 413 ~l~GkrVaIqGf-GNVG~~aAe~L~e~GAkVVaVSDs 448 (636)
++.+++|+|.|. |.+|+++++.|.+.|.+|++++-.
T Consensus 4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~ 40 (321)
T 3vps_A 4 NTLKHRILITGGAGFIGGHLARALVASGEEVTVLDDL 40 (321)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred ccCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecC
Confidence 356889999996 999999999999999998777543
No 359
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=80.83 E-value=1.9 Score=41.99 Aligned_cols=35 Identities=31% Similarity=0.442 Sum_probs=30.4
Q ss_pred CCCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEe
Q 006671 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (636)
Q Consensus 412 ~~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVS 446 (636)
.+++||+++|.| .|.+|.++|+.|.+.|++|+.+.
T Consensus 5 ~~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~ 40 (260)
T 2ae2_A 5 WNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCS 40 (260)
T ss_dssp TCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEe
Confidence 368899999998 68999999999999999976553
No 360
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=80.80 E-value=1.5 Score=42.21 Aligned_cols=36 Identities=17% Similarity=0.184 Sum_probs=31.0
Q ss_pred CCCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEeC
Q 006671 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSD 447 (636)
Q Consensus 412 ~~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVSD 447 (636)
.++++++++|.| .|.+|+++++.|.+.|++|+.++-
T Consensus 10 ~~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r 46 (265)
T 1h5q_A 10 ISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYR 46 (265)
T ss_dssp ECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEES
T ss_pred cccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeC
Confidence 368899999997 689999999999999999776653
No 361
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=80.79 E-value=1.9 Score=41.76 Aligned_cols=35 Identities=20% Similarity=0.283 Sum_probs=30.3
Q ss_pred CCCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEe
Q 006671 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (636)
Q Consensus 412 ~~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVS 446 (636)
.+++|++++|.| .|-+|.++|+.|.+.|++|+.++
T Consensus 5 m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~ 40 (261)
T 3n74_A 5 MSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVD 40 (261)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEc
Confidence 478899999998 57899999999999999966553
No 362
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=80.77 E-value=1.9 Score=41.91 Aligned_cols=34 Identities=24% Similarity=0.426 Sum_probs=30.2
Q ss_pred CCCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEE
Q 006671 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (636)
Q Consensus 412 ~~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaV 445 (636)
.++++++++|.| .|.+|.++|+.|.+.|++|+.+
T Consensus 12 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~ 46 (278)
T 2bgk_A 12 NRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIA 46 (278)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred ccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEE
Confidence 457899999998 6999999999999999997765
No 363
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=80.73 E-value=1.5 Score=42.00 Aligned_cols=35 Identities=20% Similarity=0.282 Sum_probs=30.4
Q ss_pred CCCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEe
Q 006671 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (636)
Q Consensus 412 ~~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVS 446 (636)
.+++|++++|.| .|.+|+++++.|.+.|++|+.+.
T Consensus 7 ~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~ 42 (255)
T 1fmc_A 7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSD 42 (255)
T ss_dssp GCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEE
T ss_pred CCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEc
Confidence 358899999998 59999999999999999976553
No 364
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=80.72 E-value=1.9 Score=42.14 Aligned_cols=34 Identities=26% Similarity=0.507 Sum_probs=29.8
Q ss_pred CCCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEE
Q 006671 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (636)
Q Consensus 412 ~~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaV 445 (636)
.+++||+++|.| .|.+|.++|+.|.+.|++|+.+
T Consensus 3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~ 37 (262)
T 1zem_A 3 KKFNGKVCLVTGAGGNIGLATALRLAEEGTAIALL 37 (262)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred cccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEE
Confidence 467899999998 6899999999999999997654
No 365
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=80.68 E-value=1.6 Score=42.39 Aligned_cols=35 Identities=29% Similarity=0.332 Sum_probs=29.8
Q ss_pred CCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEeCC
Q 006671 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSDA 448 (636)
Q Consensus 413 ~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVSDs 448 (636)
+++||+++|.| .|.+|.++|+.|.+.|++|+.+ |.
T Consensus 1 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~-~r 36 (255)
T 2q2v_A 1 TLKGKTALVTGSTSGIGLGIAQVLARAGANIVLN-GF 36 (255)
T ss_dssp CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEE-CS
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEE-eC
Confidence 46899999998 5999999999999999997654 44
No 366
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=80.63 E-value=1.5 Score=42.10 Aligned_cols=35 Identities=26% Similarity=0.306 Sum_probs=30.2
Q ss_pred CCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEeC
Q 006671 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSD 447 (636)
Q Consensus 413 ~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVSD 447 (636)
+++|++++|.| .|-+|.++++.|.+.|++|+.+.-
T Consensus 4 ~l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r 39 (258)
T 3afn_B 4 DLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGR 39 (258)
T ss_dssp GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECC
Confidence 47899999997 699999999999999999766543
No 367
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=80.61 E-value=1.9 Score=42.69 Aligned_cols=35 Identities=20% Similarity=0.257 Sum_probs=30.4
Q ss_pred CCCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEe
Q 006671 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (636)
Q Consensus 412 ~~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVS 446 (636)
.+++|++++|.| .|.+|+++|+.|.+.|++|+.++
T Consensus 22 ~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~ 57 (302)
T 1w6u_A 22 NSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIAS 57 (302)
T ss_dssp TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEe
Confidence 358899999998 68999999999999999976654
No 368
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=80.55 E-value=0.96 Score=44.44 Aligned_cols=161 Identities=14% Similarity=0.155 Sum_probs=83.3
Q ss_pred CHHHHHHH--HHHHHHHHHhhcCCCCcccCCCCCCChhHHHHHHHHhhhhhCCCCccccCcccccCCCCCCCCcchhHHH
Q 006671 323 SDNEIMRF--CQSFMNEIHRYLGPDKDLPSEEMGVGTREMGYLFGQYRRLAGHFQGSFTGPRIFWSGSSLRTEATGYGLV 400 (636)
Q Consensus 323 S~~El~r~--~r~f~~eL~~~IGp~~DVpA~DiGt~~rem~~m~~~y~~l~g~~~g~vTGKp~~~GGs~~r~eATG~GV~ 400 (636)
++.-+.|+ +-+|..+|..- +. --++.+|++-..+-.+..-. |+++.=|..|.. --||=|.
T Consensus 4 ~~~~~~Rl~~y~r~l~~l~~~---g~------~~iss~~l~~~~~~~~~~iR--------kdls~~g~~G~~-g~gY~v~ 65 (211)
T 2dt5_A 4 PEAAISRLITYLRILEELEAQ---GV------HRTSSEQLGGLAQVTAFQVR--------KDLSYFGSYGTR-GVGYTVP 65 (211)
T ss_dssp CHHHHHHHHHHHHHHHHHHHT---TC------CEECHHHHHHHHTSCHHHHH--------HHHHHTTCCCCT-TTCEEHH
T ss_pred CHHHHHHHHHHHHHHHHHHHc---CC------cEECHHHHHHHhCCCHHHee--------chHHHHHHhcCC-ceeEEhH
Confidence 45667775 55666666632 11 11577777766543221110 111111222211 1233343
Q ss_pred HHHHHHHHHhCCCCCCcEEEEecCccHHHHHHHHH--HHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCccc
Q 006671 401 FFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKL--IAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRD 478 (636)
Q Consensus 401 ~~~~~~l~~~g~~l~GkrVaIqGfGNVG~~aAe~L--~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~ 478 (636)
+-.++.-+.+|.+ ...+|+|.|.|++|...++.+ .. |.++|++.|. ||+-.. ..+.+
T Consensus 66 ~L~~~~~~~lg~~-~~~rV~IIGaG~~G~~la~~~~~~~-g~~iVg~~D~-----dp~k~g--------------~~i~g 124 (211)
T 2dt5_A 66 VLKRELRHILGLN-RKWGLCIVGMGRLGSALADYPGFGE-SFELRGFFDV-----DPEKVG--------------RPVRG 124 (211)
T ss_dssp HHHHHHHHHHTTT-SCEEEEEECCSHHHHHHHHCSCCCS-SEEEEEEEES-----CTTTTT--------------CEETT
T ss_pred HHHHHHHHHhCcC-CCCEEEEECccHHHHHHHHhHhhcC-CcEEEEEEeC-----CHHHHh--------------hhhcC
Confidence 3344433345543 347999999999999999852 34 8999999996 443210 00111
Q ss_pred cccccCCceeeCC-CCcc-ccccceEecCCCcCccchhhHHHhhhcCceEEEe
Q 006671 479 YSKTYARSKYYDE-AKPW-NERCDVAFPCASQNEIDQSDAINLVNSGCRILVE 529 (636)
Q Consensus 479 y~~~~p~a~~i~~-~eil-~~~cDIliPcA~~n~It~enA~~l~~~~akiVvE 529 (636)
+ | ...++. ++++ . ++|+++-|..... ..+-+..+.+.|++.|..
T Consensus 125 v----~-V~~~~dl~ell~~-~ID~ViIA~Ps~~-~~ei~~~l~~aGi~~Iln 170 (211)
T 2dt5_A 125 G----V-IEHVDLLPQRVPG-RIEIALLTVPREA-AQKAADLLVAAGIKGILN 170 (211)
T ss_dssp E----E-EEEGGGHHHHSTT-TCCEEEECSCHHH-HHHHHHHHHHHTCCEEEE
T ss_pred C----e-eecHHhHHHHHHc-CCCEEEEeCCchh-HHHHHHHHHHcCCCEEEE
Confidence 1 1 001111 1233 4 7888888876543 335566666667775543
No 369
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=80.50 E-value=1.9 Score=42.01 Aligned_cols=36 Identities=33% Similarity=0.475 Sum_probs=30.6
Q ss_pred CCCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEeCC
Q 006671 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSDA 448 (636)
Q Consensus 412 ~~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVSDs 448 (636)
.+++||+++|.| .|-+|.++|+.|.+.|++|+ +.|.
T Consensus 2 ~~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~-~~~r 38 (247)
T 3rwb_A 2 ERLAGKTALVTGAAQGIGKAIAARLAADGATVI-VSDI 38 (247)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEE-EECS
T ss_pred CCcCCCEEEEECCCCHHHHHHHHHHHHCCCEEE-EEeC
Confidence 368999999998 58899999999999999965 4554
No 370
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=80.41 E-value=1.8 Score=42.80 Aligned_cols=36 Identities=39% Similarity=0.574 Sum_probs=31.1
Q ss_pred CCCCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEe
Q 006671 411 NKELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (636)
Q Consensus 411 g~~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVS 446 (636)
..+++||+|+|.| .|-+|.++|+.|.+.|++|+.++
T Consensus 9 ~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~ 45 (269)
T 3vtz_A 9 MEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVS 45 (269)
T ss_dssp -CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 3578999999998 58899999999999999977654
No 371
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=80.41 E-value=2 Score=42.44 Aligned_cols=36 Identities=28% Similarity=0.376 Sum_probs=30.9
Q ss_pred CCCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEeCC
Q 006671 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSDA 448 (636)
Q Consensus 412 ~~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVSDs 448 (636)
.+++||+++|.| .|-+|.++|+.|.+.|++|+. .|.
T Consensus 7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~-~~r 43 (271)
T 3tzq_B 7 AELENKVAIITGACGGIGLETSRVLARAGARVVL-ADL 43 (271)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEE-EEC
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEE-EcC
Confidence 478999999998 588999999999999999655 444
No 372
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=80.38 E-value=2 Score=42.38 Aligned_cols=36 Identities=25% Similarity=0.329 Sum_probs=30.8
Q ss_pred CCCCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEe
Q 006671 411 NKELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (636)
Q Consensus 411 g~~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVS 446 (636)
..+++||+++|.| .|.+|.++|+.|.+.|++|+.++
T Consensus 16 ~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~ 52 (267)
T 1vl8_A 16 VFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVAS 52 (267)
T ss_dssp -CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 4578999999998 68999999999999999976553
No 373
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=80.23 E-value=2 Score=42.49 Aligned_cols=34 Identities=21% Similarity=0.218 Sum_probs=29.2
Q ss_pred CCCCcEEEEecC-cc--HHHHHHHHHHHCCCEEEEEe
Q 006671 413 ELKGLRCVVSGS-GK--IAMHVLEKLIAYGAIPVSVS 446 (636)
Q Consensus 413 ~l~GkrVaIqGf-GN--VG~~aAe~L~e~GAkVVaVS 446 (636)
+++||+++|.|. |+ +|..+|+.|.+.|++|+.+.
T Consensus 23 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~ 59 (280)
T 3nrc_A 23 FLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTY 59 (280)
T ss_dssp TTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEE
T ss_pred ccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEee
Confidence 588999999984 56 99999999999999966554
No 374
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=80.16 E-value=1.9 Score=41.92 Aligned_cols=35 Identities=29% Similarity=0.362 Sum_probs=30.3
Q ss_pred CCCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEe
Q 006671 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (636)
Q Consensus 412 ~~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVS 446 (636)
.+++||+++|.| .|-+|.++|+.|.+.|++|+.+.
T Consensus 5 ~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~ 40 (248)
T 3op4_A 5 MNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTA 40 (248)
T ss_dssp TCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 468899999998 58899999999999999976553
No 375
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=80.11 E-value=1.9 Score=41.89 Aligned_cols=35 Identities=26% Similarity=0.313 Sum_probs=30.3
Q ss_pred CCCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEe
Q 006671 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (636)
Q Consensus 412 ~~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVS 446 (636)
.+++||+++|.| .|.+|.++|+.|.+.|++|+.++
T Consensus 10 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~ 45 (260)
T 2zat_A 10 KPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSS 45 (260)
T ss_dssp CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEe
Confidence 468899999998 68999999999999999976553
No 376
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=80.09 E-value=1.3 Score=43.15 Aligned_cols=33 Identities=18% Similarity=0.047 Sum_probs=29.4
Q ss_pred CcEEEEecCccHHHHHHHHHHHCCCEEEEEeCC
Q 006671 416 GLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (636)
Q Consensus 416 GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs 448 (636)
.++|+|.|.|.+|+++++.|.+.|..|++++-+
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~ 37 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGWRIIGTSRN 37 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESC
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcC
Confidence 378999999999999999999999998887643
No 377
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=80.08 E-value=1.3 Score=44.65 Aligned_cols=37 Identities=19% Similarity=0.177 Sum_probs=27.9
Q ss_pred CCCCCcEEEEecC-ccHHHHHHHHHHHCCCEEEEEeCC
Q 006671 412 KELKGLRCVVSGS-GKIAMHVLEKLIAYGAIPVSVSDA 448 (636)
Q Consensus 412 ~~l~GkrVaIqGf-GNVG~~aAe~L~e~GAkVVaVSDs 448 (636)
.++++++|+|.|. |.+|+++++.|.+.|++|++++-.
T Consensus 15 ~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~ 52 (347)
T 4id9_A 15 VPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLR 52 (347)
T ss_dssp ------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCC
Confidence 4678899999996 999999999999999998877543
No 378
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=80.06 E-value=1.1 Score=46.92 Aligned_cols=32 Identities=19% Similarity=0.151 Sum_probs=27.8
Q ss_pred CcEEEEecCccHHHHHHHHHHHCCCEEEEEeCC
Q 006671 416 GLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (636)
Q Consensus 416 GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs 448 (636)
-.+|+|.|.|.+|...|..+...|.. |.+.|.
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~~-V~l~D~ 37 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGFR-VKLYDI 37 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCC-EEEECS
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCCe-EEEEEC
Confidence 46899999999999999999999999 556675
No 379
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=80.05 E-value=1.9 Score=42.31 Aligned_cols=36 Identities=31% Similarity=0.420 Sum_probs=30.9
Q ss_pred hCCCCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEE
Q 006671 410 MNKELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (636)
Q Consensus 410 ~g~~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaV 445 (636)
+..+++||+++|.| .|-+|.++|+.|.+.|++|+.+
T Consensus 4 m~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~ 40 (267)
T 3t4x_A 4 MHMQLKGKTALVTGSTAGIGKAIATSLVAEGANVLIN 40 (267)
T ss_dssp CCCCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred cccccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEE
Confidence 34578999999998 5889999999999999996654
No 380
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=80.04 E-value=2.1 Score=41.72 Aligned_cols=34 Identities=26% Similarity=0.327 Sum_probs=29.8
Q ss_pred CCCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEE
Q 006671 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (636)
Q Consensus 412 ~~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaV 445 (636)
.+++|++++|.| .|.+|.++|+.|.+.|++|+.+
T Consensus 8 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~ 42 (263)
T 3ak4_A 8 FDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIA 42 (263)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEE
Confidence 357899999998 6899999999999999997655
No 381
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=80.03 E-value=0.89 Score=48.70 Aligned_cols=37 Identities=22% Similarity=0.383 Sum_probs=32.6
Q ss_pred CCCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCC
Q 006671 413 ELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKG 450 (636)
Q Consensus 413 ~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G 450 (636)
++++++|.|.|.|..|..+|+.|.++|++ |.++|++-
T Consensus 2 ~~~~~~v~viG~G~~G~~~a~~l~~~G~~-v~~~D~~~ 38 (439)
T 2x5o_A 2 DYQGKNVVIIGLGLTGLSCVDFFLARGVT-PRVMDTRM 38 (439)
T ss_dssp CCTTCCEEEECCHHHHHHHHHHHHTTTCC-CEEEESSS
T ss_pred CCCCCEEEEEeecHHHHHHHHHHHhCCCE-EEEEECCC
Confidence 46789999999999999999999999999 56788743
No 382
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=80.02 E-value=2.1 Score=42.06 Aligned_cols=33 Identities=18% Similarity=0.113 Sum_probs=29.3
Q ss_pred CCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEE
Q 006671 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (636)
Q Consensus 413 ~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaV 445 (636)
+++||+++|.| .|-+|.++|+.|.+.|++|+.+
T Consensus 7 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~ 40 (287)
T 3pxx_A 7 RVQDKVVLVTGGARGQGRSHAVKLAEEGADIILF 40 (287)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred ccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEE
Confidence 58899999998 5889999999999999996654
No 383
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=80.00 E-value=6.2 Score=35.77 Aligned_cols=31 Identities=23% Similarity=0.236 Sum_probs=26.7
Q ss_pred cEEEEecCccHHHHHHHHHHHCCCEEEEEeCC
Q 006671 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (636)
Q Consensus 417 krVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs 448 (636)
.+|+|+|.|.+|..+|..|.+.|.+|+ +.|.
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~-lie~ 32 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVL-VLDG 32 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEE-EEEC
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEE-EEeC
Confidence 379999999999999999999999954 5554
No 384
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=79.96 E-value=2.1 Score=40.39 Aligned_cols=34 Identities=21% Similarity=0.189 Sum_probs=29.4
Q ss_pred CCCcEEEEec-CccHHHHHHHHHHHC--CCEEEEEeC
Q 006671 414 LKGLRCVVSG-SGKIAMHVLEKLIAY--GAIPVSVSD 447 (636)
Q Consensus 414 l~GkrVaIqG-fGNVG~~aAe~L~e~--GAkVVaVSD 447 (636)
.++++|+|.| .|.+|+++++.|.+. |++|++++-
T Consensus 2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r 38 (253)
T 1xq6_A 2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVR 38 (253)
T ss_dssp CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEES
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEc
Confidence 4688999998 699999999999999 899877653
No 385
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=79.95 E-value=1.9 Score=42.24 Aligned_cols=33 Identities=36% Similarity=0.385 Sum_probs=29.4
Q ss_pred CCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEE
Q 006671 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (636)
Q Consensus 413 ~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaV 445 (636)
+++|++|+|.| .|-+|.++|+.|.+.|++|+.+
T Consensus 26 ~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~ 59 (262)
T 3rkr_A 26 SLSGQVAVVTGASRGIGAAIARKLGSLGARVVLT 59 (262)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEE
Confidence 57899999998 6899999999999999997655
No 386
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=79.93 E-value=1.9 Score=42.16 Aligned_cols=35 Identities=17% Similarity=0.246 Sum_probs=30.1
Q ss_pred CCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEeCC
Q 006671 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSDA 448 (636)
Q Consensus 413 ~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVSDs 448 (636)
+++||+++|.| .|-+|.++|+.|.+.|++|+. .|.
T Consensus 3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~-~~r 38 (257)
T 3imf_A 3 AMKEKVVIITGGSSGMGKGMATRFAKEGARVVI-TGR 38 (257)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEE-EES
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEE-EeC
Confidence 58899999998 588999999999999999665 444
No 387
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=79.89 E-value=2.1 Score=42.30 Aligned_cols=35 Identities=20% Similarity=0.220 Sum_probs=30.4
Q ss_pred CCCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEe
Q 006671 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (636)
Q Consensus 412 ~~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVS 446 (636)
.+++||+++|.| .|-+|..+|+.|.+.|++|+.++
T Consensus 2 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~ 37 (274)
T 3e03_A 2 LTLSGKTLFITGASRGIGLAIALRAARDGANVAIAA 37 (274)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEe
Confidence 468999999998 68899999999999999976554
No 388
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=79.86 E-value=1.9 Score=42.82 Aligned_cols=35 Identities=29% Similarity=0.390 Sum_probs=30.8
Q ss_pred CCCCcEEEEecC-ccHHHHHHHHHHHCCCEEEEEeC
Q 006671 413 ELKGLRCVVSGS-GKIAMHVLEKLIAYGAIPVSVSD 447 (636)
Q Consensus 413 ~l~GkrVaIqGf-GNVG~~aAe~L~e~GAkVVaVSD 447 (636)
.+++++|+|.|. |-+|+++++.|.+.|++|+++..
T Consensus 8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r 43 (342)
T 1y1p_A 8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTAR 43 (342)
T ss_dssp SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeC
Confidence 467899999985 99999999999999999877654
No 389
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=79.77 E-value=6.4 Score=42.73 Aligned_cols=119 Identities=14% Similarity=0.224 Sum_probs=71.4
Q ss_pred HHHHHHHHhCCCCCCcEEEEecCc----------cHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHh
Q 006671 402 FAQLILADMNKELKGLRCVVSGSG----------KIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKS 471 (636)
Q Consensus 402 ~~~~~l~~~g~~l~GkrVaIqGfG----------NVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~ 471 (636)
.++.+.+.++.+++|+||+|-|+- .-+..+++.|.+.|++| . +|||.-. +. .+.
T Consensus 308 ~~~~i~~~l~~~~~~~~v~vlGlafK~~~dD~ReSp~~~i~~~L~~~g~~v-~-------~~DP~~~--~~------~~~ 371 (446)
T 4a7p_A 308 MGRKVIKAMGGDVRGKTVGILGLTFKPNTDDMRDAPSLSIIAALQDAGATV-K-------AYDPEGV--EQ------ASK 371 (446)
T ss_dssp HHHHHHHHTTSCCTTCEEEEECCSSSTTSCCCTTCSHHHHHHHHHHTSCEE-E-------EECSSCH--HH------HGG
T ss_pred HHHHHHHHhcccCCCCEEEEEEEEeCCCCcccccChHHHHHHHHHHCCCEE-E-------EECCCCC--Hh------HHH
Confidence 344455567888999999999985 55789999999999995 3 4566542 11 111
Q ss_pred hcCCccccccccCCceeeCCCCccccccceEecCCCcCccchhhHHHhhh-cCceEEEeCCCCCCCHHHHHHHHHCCceE
Q 006671 472 QQRSLRDYSKTYARSKYYDEAKPWNERCDVAFPCASQNEIDQSDAINLVN-SGCRILVEGSNMPCTPEAVDVLKKANVLI 550 (636)
Q Consensus 472 ~~g~l~~y~~~~p~a~~i~~~eil~~~cDIliPcA~~n~It~enA~~l~~-~~akiVvEgAN~P~T~eA~~iL~~rGIlv 550 (636)
. |++.++.+..+-.-.++|+++-+.--.+...-+...|.+ .+.++|+.+-|.- .++ .+++.|..|
T Consensus 372 ------~----~~~~~~~~~~~~~~~~ad~vvi~t~~~~f~~~d~~~~~~~~~~~~i~D~r~~~-~~~---~~~~~g~~y 437 (446)
T 4a7p_A 372 ------M----LTDVEFVENPYAAADGADALVIVTEWDAFRALDLTRIKNSLKSPVLVDLRNIY-PPA---ELERAGLQY 437 (446)
T ss_dssp ------G----CSSCCBCSCHHHHHTTBSEEEECSCCTTTTSCCHHHHHTTBSSCBEECSSCCS-CHH---HHHHTTCBC
T ss_pred ------h----cCCceEecChhHHhcCCCEEEEeeCCHHhhcCCHHHHHHhcCCCEEEECCCCC-CHH---HHHhcCCEE
Confidence 1 233333221000123789998887655543333333322 2568999999964 332 446777655
No 390
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=79.76 E-value=2.2 Score=43.46 Aligned_cols=35 Identities=17% Similarity=0.395 Sum_probs=30.2
Q ss_pred CCCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEe
Q 006671 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (636)
Q Consensus 412 ~~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVS 446 (636)
.+++|++|+|.| .|-+|.++|+.|.+.|++|+.+.
T Consensus 4 ~~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~ 39 (319)
T 3ioy_A 4 KDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIAD 39 (319)
T ss_dssp CCCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEE
T ss_pred cCCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEE
Confidence 367899999998 69999999999999999966543
No 391
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=79.75 E-value=2.3 Score=41.72 Aligned_cols=36 Identities=19% Similarity=0.167 Sum_probs=30.2
Q ss_pred CCCCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEe
Q 006671 411 NKELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (636)
Q Consensus 411 g~~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVS 446 (636)
...++||+++|.| .|-+|.++|+.|.+.|++|+.+.
T Consensus 6 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~ 42 (264)
T 3ucx_A 6 GGLLTDKVVVISGVGPALGTTLARRCAEQGADLVLAA 42 (264)
T ss_dssp -CTTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEe
Confidence 3468999999998 57899999999999999976543
No 392
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=79.72 E-value=3 Score=42.48 Aligned_cols=34 Identities=24% Similarity=0.219 Sum_probs=30.3
Q ss_pred CCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeC
Q 006671 414 LKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSD 447 (636)
Q Consensus 414 l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSD 447 (636)
-.|.+|+|.|.|.||..+++++...|++|+++.-
T Consensus 165 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~ 198 (340)
T 3s2e_A 165 RPGQWVVISGIGGLGHVAVQYARAMGLRVAAVDI 198 (340)
T ss_dssp CTTSEEEEECCSTTHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeC
Confidence 4689999999999999999999999999877643
No 393
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=79.72 E-value=2.1 Score=42.49 Aligned_cols=34 Identities=18% Similarity=0.411 Sum_probs=29.8
Q ss_pred CCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEe
Q 006671 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (636)
Q Consensus 413 ~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVS 446 (636)
+++||+++|.| .|-+|.++|+.|.+.|++|+.+.
T Consensus 2 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~ 36 (281)
T 3zv4_A 2 KLTGEVALITGGASGLGRALVDRFVAEGARVAVLD 36 (281)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEe
Confidence 57899999998 68899999999999999976553
No 394
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=79.72 E-value=2.2 Score=42.01 Aligned_cols=35 Identities=14% Similarity=0.111 Sum_probs=30.8
Q ss_pred CCCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEe
Q 006671 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (636)
Q Consensus 412 ~~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVS 446 (636)
.++++++++|.| .|-+|.++|+.|.+.|++|+.+.
T Consensus 27 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~ 62 (272)
T 1yb1_A 27 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWD 62 (272)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEE
Confidence 578999999998 68999999999999999976554
No 395
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=79.68 E-value=2.1 Score=41.68 Aligned_cols=33 Identities=21% Similarity=0.370 Sum_probs=29.3
Q ss_pred CCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEE
Q 006671 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (636)
Q Consensus 413 ~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaV 445 (636)
+++|++++|.| .|-+|.++|+.|.+.|++|+.+
T Consensus 2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~ 35 (254)
T 1hdc_A 2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLA 35 (254)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEE
Confidence 57899999998 5899999999999999997655
No 396
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=79.63 E-value=3.7 Score=41.62 Aligned_cols=35 Identities=20% Similarity=0.230 Sum_probs=30.6
Q ss_pred CCCCcEEEEecC-ccHHHHHHHHHHHCCCEEEEEeC
Q 006671 413 ELKGLRCVVSGS-GKIAMHVLEKLIAYGAIPVSVSD 447 (636)
Q Consensus 413 ~l~GkrVaIqGf-GNVG~~aAe~L~e~GAkVVaVSD 447 (636)
--.|++|+|.|. |.||..+++.+...|++|+++..
T Consensus 147 ~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~ 182 (336)
T 4b7c_A 147 PKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAG 182 (336)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 346899999998 99999999999999999877653
No 397
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=79.61 E-value=2.2 Score=41.53 Aligned_cols=34 Identities=24% Similarity=0.270 Sum_probs=29.6
Q ss_pred CCCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEE
Q 006671 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (636)
Q Consensus 412 ~~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaV 445 (636)
..++||+++|.| .|-+|.++|+.|.+.|++|+.+
T Consensus 8 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~ 42 (252)
T 3f1l_A 8 DLLNDRIILVTGASDGIGREAAMTYARYGATVILL 42 (252)
T ss_dssp TTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred cccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEE
Confidence 458999999998 5889999999999999996654
No 398
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=79.59 E-value=1.8 Score=42.62 Aligned_cols=34 Identities=26% Similarity=0.358 Sum_probs=29.8
Q ss_pred CCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEe
Q 006671 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (636)
Q Consensus 413 ~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVS 446 (636)
+++|++++|.| .|.+|.++|+.|.+.|++|+.++
T Consensus 29 ~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~ 63 (279)
T 1xg5_A 29 RWRDRLALVTGASGGIGAAVARALVQQGLKVVGCA 63 (279)
T ss_dssp GGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEE
Confidence 47899999997 69999999999999999976653
No 399
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=79.58 E-value=2 Score=41.73 Aligned_cols=35 Identities=23% Similarity=0.417 Sum_probs=30.6
Q ss_pred CCCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEe
Q 006671 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (636)
Q Consensus 412 ~~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVS 446 (636)
.++++++|+|.| .|-+|.++++.|.+.|++|+.+.
T Consensus 10 ~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~ 45 (266)
T 1xq1_A 10 WSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCA 45 (266)
T ss_dssp TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 468899999997 69999999999999999976654
No 400
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=79.57 E-value=1 Score=46.72 Aligned_cols=34 Identities=18% Similarity=0.153 Sum_probs=29.2
Q ss_pred CCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeCC
Q 006671 414 LKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (636)
Q Consensus 414 l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs 448 (636)
+++++|.|.|+|++|..+|..|.+.|..|+ +.|.
T Consensus 14 l~~~~I~IIG~G~mG~alA~~L~~~G~~V~-~~~~ 47 (338)
T 1np3_A 14 IQGKKVAIIGYGSQGHAHACNLKDSGVDVT-VGLR 47 (338)
T ss_dssp HHTSCEEEECCSHHHHHHHHHHHHTTCCEE-EECC
T ss_pred hcCCEEEEECchHHHHHHHHHHHHCcCEEE-EEEC
Confidence 567899999999999999999999998854 5554
No 401
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=79.56 E-value=2.3 Score=41.29 Aligned_cols=34 Identities=26% Similarity=0.310 Sum_probs=29.6
Q ss_pred CCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEe
Q 006671 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (636)
Q Consensus 413 ~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVS 446 (636)
+++|++++|.| .|-+|..+|+.|.+.|++|+.+.
T Consensus 2 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~ 36 (245)
T 1uls_A 2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACD 36 (245)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 47899999998 68999999999999999976553
No 402
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=79.53 E-value=2.1 Score=42.60 Aligned_cols=35 Identities=26% Similarity=0.302 Sum_probs=30.4
Q ss_pred CCCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEe
Q 006671 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (636)
Q Consensus 412 ~~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVS 446 (636)
.+++||+++|.| .|-+|.++|+.|.+.|++|+.+.
T Consensus 28 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~ 63 (276)
T 3r1i_A 28 FDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAA 63 (276)
T ss_dssp GCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 368999999998 68999999999999999966554
No 403
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=79.52 E-value=2.2 Score=41.52 Aligned_cols=34 Identities=18% Similarity=0.259 Sum_probs=29.7
Q ss_pred CCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEe
Q 006671 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (636)
Q Consensus 413 ~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVS 446 (636)
+++||+++|.| .|.+|.++|+.|.+.|++|+.+.
T Consensus 3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~ 37 (256)
T 2d1y_A 3 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCD 37 (256)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 47899999998 68999999999999999976553
No 404
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=79.51 E-value=2.1 Score=42.25 Aligned_cols=34 Identities=15% Similarity=0.205 Sum_probs=29.9
Q ss_pred CCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEe
Q 006671 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (636)
Q Consensus 413 ~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVS 446 (636)
+++||+++|.| .|-+|.++|+.|.+.|++|+.+.
T Consensus 7 ~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~ 41 (281)
T 3s55_A 7 DFEGKTALITGGARGMGRSHAVALAEAGADIAICD 41 (281)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEe
Confidence 68999999998 68899999999999999966554
No 405
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=79.43 E-value=2.2 Score=41.83 Aligned_cols=34 Identities=18% Similarity=0.374 Sum_probs=29.8
Q ss_pred CCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEe
Q 006671 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (636)
Q Consensus 413 ~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVS 446 (636)
+++||+++|.| .|-+|.++|+.|.+.|++|+.+.
T Consensus 5 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~ 39 (255)
T 4eso_A 5 NYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTG 39 (255)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 58899999998 68899999999999999976553
No 406
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=79.42 E-value=2.2 Score=41.88 Aligned_cols=34 Identities=24% Similarity=0.222 Sum_probs=30.1
Q ss_pred CCCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEE
Q 006671 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (636)
Q Consensus 412 ~~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaV 445 (636)
.+++||+++|.| .|-+|.++|+.|.+.|++|+.+
T Consensus 9 ~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~ 43 (278)
T 3sx2_A 9 GPLTGKVAFITGAARGQGRAHAVRLAADGADIIAV 43 (278)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEE
Confidence 468999999998 5889999999999999997655
No 407
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=79.41 E-value=3.7 Score=41.68 Aligned_cols=35 Identities=20% Similarity=0.246 Sum_probs=30.7
Q ss_pred CCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEeC
Q 006671 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSD 447 (636)
Q Consensus 413 ~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVSD 447 (636)
--.|.+|+|.| .|.||..+++.+...|++|+++..
T Consensus 146 ~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~ 181 (334)
T 3qwb_A 146 VKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVAS 181 (334)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 34789999999 899999999999999999877654
No 408
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=79.40 E-value=2 Score=42.17 Aligned_cols=34 Identities=24% Similarity=0.264 Sum_probs=29.9
Q ss_pred CCCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEE
Q 006671 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (636)
Q Consensus 412 ~~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaV 445 (636)
.+++||+++|.| .|-+|.++|+.|.+.|++|+.+
T Consensus 6 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~ 40 (262)
T 3pk0_A 6 FDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVA 40 (262)
T ss_dssp TCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEE
Confidence 368999999998 6899999999999999997654
No 409
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=79.24 E-value=2 Score=41.51 Aligned_cols=35 Identities=31% Similarity=0.257 Sum_probs=30.2
Q ss_pred CCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEeC
Q 006671 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSD 447 (636)
Q Consensus 413 ~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVSD 447 (636)
+++|++++|.| .|-+|.++|+.|.+.|++|+.+.-
T Consensus 1 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r 36 (246)
T 2uvd_A 1 MLKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYA 36 (246)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 36799999998 689999999999999999876643
No 410
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=79.13 E-value=2 Score=42.01 Aligned_cols=35 Identities=23% Similarity=0.285 Sum_probs=30.2
Q ss_pred CCCCCcEEEEecC---ccHHHHHHHHHHHCCCEEEEEe
Q 006671 412 KELKGLRCVVSGS---GKIAMHVLEKLIAYGAIPVSVS 446 (636)
Q Consensus 412 ~~l~GkrVaIqGf---GNVG~~aAe~L~e~GAkVVaVS 446 (636)
.+++||+++|.|. |.+|.++|+.|.+.|++|+.+.
T Consensus 4 ~~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~ 41 (261)
T 2wyu_A 4 VDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSY 41 (261)
T ss_dssp ECCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEE
T ss_pred cCCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEc
Confidence 3578999999995 6999999999999999976553
No 411
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=79.11 E-value=1.8 Score=42.26 Aligned_cols=35 Identities=20% Similarity=0.168 Sum_probs=29.2
Q ss_pred CCCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEe
Q 006671 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (636)
Q Consensus 412 ~~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVS 446 (636)
.+++|++++|.| .|-+|..+|+.|.+.|++|+.++
T Consensus 3 ~~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~ 38 (250)
T 3nyw_A 3 LEKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIA 38 (250)
T ss_dssp --CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEE
T ss_pred ccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEE
Confidence 367899999998 58999999999999999976553
No 412
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=79.10 E-value=2.4 Score=41.42 Aligned_cols=34 Identities=24% Similarity=0.340 Sum_probs=29.6
Q ss_pred CCCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEE
Q 006671 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (636)
Q Consensus 412 ~~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaV 445 (636)
.+++||+++|.| .|-+|.++|+.|.+.|++|+.+
T Consensus 4 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~ 38 (259)
T 4e6p_A 4 KRLEGKSALITGSARGIGRAFAEAYVREGATVAIA 38 (259)
T ss_dssp CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred ccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEE
Confidence 357899999998 6899999999999999996654
No 413
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=79.09 E-value=2.1 Score=42.15 Aligned_cols=34 Identities=24% Similarity=0.242 Sum_probs=29.7
Q ss_pred CCCCcEEEEecC---ccHHHHHHHHHHHCCCEEEEEe
Q 006671 413 ELKGLRCVVSGS---GKIAMHVLEKLIAYGAIPVSVS 446 (636)
Q Consensus 413 ~l~GkrVaIqGf---GNVG~~aAe~L~e~GAkVVaVS 446 (636)
+++||+++|.|. |-+|.++|+.|.+.|++|+.+.
T Consensus 3 ~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~ 39 (275)
T 2pd4_A 3 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTY 39 (275)
T ss_dssp TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEE
T ss_pred CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEe
Confidence 478999999995 7999999999999999976554
No 414
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=79.09 E-value=2.4 Score=42.53 Aligned_cols=36 Identities=19% Similarity=0.213 Sum_probs=30.5
Q ss_pred CCCCCcEEEEecCc---cHHHHHHHHHHHCCCEEEEEeCC
Q 006671 412 KELKGLRCVVSGSG---KIAMHVLEKLIAYGAIPVSVSDA 448 (636)
Q Consensus 412 ~~l~GkrVaIqGfG---NVG~~aAe~L~e~GAkVVaVSDs 448 (636)
.+++||+++|.|.+ -+|..+|+.|.+.|++|+. .|.
T Consensus 26 ~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~-~~r 64 (296)
T 3k31_A 26 MLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVAL-TYL 64 (296)
T ss_dssp CTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEE-EES
T ss_pred hccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEE-EeC
Confidence 46889999999975 8999999999999999654 444
No 415
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=79.07 E-value=2.6 Score=41.80 Aligned_cols=36 Identities=25% Similarity=0.242 Sum_probs=31.4
Q ss_pred CCCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEeC
Q 006671 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSD 447 (636)
Q Consensus 412 ~~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVSD 447 (636)
.+++||+++|.| .|-+|..+|+.|.+.|++|+.+..
T Consensus 27 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~ 63 (271)
T 3v2g_A 27 ISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYV 63 (271)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 578999999998 588999999999999999776644
No 416
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=79.01 E-value=2.3 Score=41.96 Aligned_cols=35 Identities=20% Similarity=0.214 Sum_probs=30.6
Q ss_pred CCCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEe
Q 006671 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (636)
Q Consensus 412 ~~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVS 446 (636)
.+++||+++|.| .|-+|.++|+.|.+.|++|+.+.
T Consensus 11 ~~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~ 46 (280)
T 3pgx_A 11 GSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACD 46 (280)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEe
Confidence 468999999998 68899999999999999976653
No 417
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=78.93 E-value=2.3 Score=41.65 Aligned_cols=34 Identities=18% Similarity=0.192 Sum_probs=29.5
Q ss_pred CCCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEE
Q 006671 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (636)
Q Consensus 412 ~~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaV 445 (636)
.+++|++++|.| .|.+|.++|+.|.+.|++|+.+
T Consensus 9 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~ 43 (267)
T 1iy8_A 9 TRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLV 43 (267)
T ss_dssp -CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred ccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEE
Confidence 358899999997 6899999999999999997655
No 418
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=78.90 E-value=2.2 Score=42.29 Aligned_cols=36 Identities=25% Similarity=0.350 Sum_probs=30.9
Q ss_pred CCCCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEe
Q 006671 411 NKELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (636)
Q Consensus 411 g~~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVS 446 (636)
..+++||+++|.| .|-+|.++|+.|.+.|++|+.+.
T Consensus 23 ~~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~ 59 (270)
T 3ftp_A 23 DKTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTA 59 (270)
T ss_dssp CCTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred ccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 3568999999998 58899999999999999976554
No 419
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=78.87 E-value=4.1 Score=41.72 Aligned_cols=49 Identities=14% Similarity=0.099 Sum_probs=35.3
Q ss_pred CCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHH
Q 006671 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLR 467 (636)
Q Consensus 413 ~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~ 467 (636)
++++++++|.| .|-+|.++|+.|.+.|++|++.+- +..+.+.+.+..+.
T Consensus 2 ~m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r------~~~~r~~~~~~~l~ 51 (324)
T 3u9l_A 2 VMSKKIILITGASSGFGRLTAEALAGAGHRVYASMR------DIVGRNASNVEAIA 51 (324)
T ss_dssp ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEES------CTTTTTHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecC------cccccCHHHHHHHH
Confidence 46789999998 689999999999999999876543 34455555554443
No 420
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=78.85 E-value=1.9 Score=42.65 Aligned_cols=37 Identities=16% Similarity=0.196 Sum_probs=28.5
Q ss_pred hCCCCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEe
Q 006671 410 MNKELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (636)
Q Consensus 410 ~g~~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVS 446 (636)
++.++.+|+++|.| .|-+|.++|+.|.+.|++|+.+.
T Consensus 10 m~~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~ 47 (266)
T 3p19_A 10 MGRGSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLA 47 (266)
T ss_dssp -----CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEE
Confidence 34568899999998 58899999999999999977654
No 421
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=78.85 E-value=1.8 Score=41.84 Aligned_cols=35 Identities=20% Similarity=0.208 Sum_probs=30.5
Q ss_pred CCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEeC
Q 006671 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSD 447 (636)
Q Consensus 413 ~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVSD 447 (636)
+++|++|+|.| .|.+|+++++.|.+.|++|+.++-
T Consensus 4 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r 39 (261)
T 1gee_A 4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYR 39 (261)
T ss_dssp GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcC
Confidence 57899999997 799999999999999999776643
No 422
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=78.83 E-value=1.9 Score=44.99 Aligned_cols=35 Identities=23% Similarity=0.350 Sum_probs=30.7
Q ss_pred CCCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeCC
Q 006671 413 ELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (636)
Q Consensus 413 ~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs 448 (636)
.+++++|+|.|.|.+|..+++.|...|++ |.+.|.
T Consensus 164 ~l~~~~VlViGaGgvG~~aa~~a~~~Ga~-V~v~dr 198 (361)
T 1pjc_A 164 GVKPGKVVILGGGVVGTEAAKMAVGLGAQ-VQIFDI 198 (361)
T ss_dssp TBCCCEEEEECCSHHHHHHHHHHHHTTCE-EEEEES
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCE-EEEEeC
Confidence 36779999999999999999999999997 566665
No 423
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=78.77 E-value=4.3 Score=42.19 Aligned_cols=33 Identities=24% Similarity=0.256 Sum_probs=29.3
Q ss_pred CCcEEEEecCccHHHHHHHHHHHCCCEEEEEeC
Q 006671 415 KGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSD 447 (636)
Q Consensus 415 ~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSD 447 (636)
.|.+|+|.|.|.||..+++++...|++|+++.-
T Consensus 194 ~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~ 226 (369)
T 1uuf_A 194 PGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTT 226 (369)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 689999999999999999999999999766553
No 424
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=78.73 E-value=2.2 Score=41.02 Aligned_cols=36 Identities=19% Similarity=0.278 Sum_probs=31.1
Q ss_pred CCCCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEe
Q 006671 411 NKELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (636)
Q Consensus 411 g~~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVS 446 (636)
..++++++|+|.| .|-+|.++|+.|.+.|++|+.+.
T Consensus 9 ~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~ 45 (249)
T 3f9i_A 9 MIDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISG 45 (249)
T ss_dssp CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred cccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEc
Confidence 3578999999998 68999999999999999976543
No 425
>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=78.71 E-value=2.2 Score=41.25 Aligned_cols=34 Identities=15% Similarity=0.181 Sum_probs=29.6
Q ss_pred CCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEe
Q 006671 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (636)
Q Consensus 413 ~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVS 446 (636)
+++|++++|.| .|.+|.++|+.|.+.|++|+.+.
T Consensus 3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~ 37 (246)
T 2ag5_A 3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATD 37 (246)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEE
Confidence 47899999998 58999999999999999976553
No 426
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=78.69 E-value=2.4 Score=41.16 Aligned_cols=33 Identities=27% Similarity=0.317 Sum_probs=29.2
Q ss_pred CCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEE
Q 006671 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (636)
Q Consensus 413 ~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaV 445 (636)
+++|++++|.| .|.+|.++|+.|.+.|++|+.+
T Consensus 4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~ 37 (247)
T 2jah_A 4 ALQGKVALITGASSGIGEATARALAAEGAAVAIA 37 (247)
T ss_dssp TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEE
Confidence 57899999998 6899999999999999997654
No 427
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=78.68 E-value=1.9 Score=42.34 Aligned_cols=35 Identities=17% Similarity=0.212 Sum_probs=29.0
Q ss_pred CCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEeC
Q 006671 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSD 447 (636)
Q Consensus 413 ~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVSD 447 (636)
++.+|+++|.| .|-+|.++|+.|.+.|++|+.+.-
T Consensus 2 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r 37 (281)
T 3m1a_A 2 SESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTAR 37 (281)
T ss_dssp --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeC
Confidence 46789999998 589999999999999999876644
No 428
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=78.67 E-value=2.5 Score=41.50 Aligned_cols=36 Identities=28% Similarity=0.324 Sum_probs=30.8
Q ss_pred CCCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEeCC
Q 006671 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSDA 448 (636)
Q Consensus 412 ~~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVSDs 448 (636)
.+++||+++|.| .|-+|..+|+.|.+.|++|+.+ |.
T Consensus 4 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~-~r 40 (265)
T 3lf2_A 4 YDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFC-AR 40 (265)
T ss_dssp CCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEE-ES
T ss_pred cCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEE-eC
Confidence 478999999998 6889999999999999996554 44
No 429
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=78.65 E-value=3 Score=43.76 Aligned_cols=33 Identities=12% Similarity=0.005 Sum_probs=28.0
Q ss_pred CCcEEEEecCccHHHHHHHHHHHCCCEEEEEeCC
Q 006671 415 KGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (636)
Q Consensus 415 ~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs 448 (636)
.-++|+|.|.|++|..+|..|.+.|..| .+.|.
T Consensus 28 ~~mkI~VIGaG~mG~alA~~La~~G~~V-~l~~r 60 (356)
T 3k96_A 28 FKHPIAILGAGSWGTALALVLARKGQKV-RLWSY 60 (356)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHTTTCCE-EEECS
T ss_pred cCCeEEEECccHHHHHHHHHHHHCCCeE-EEEeC
Confidence 3468999999999999999999999884 45554
No 430
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=78.65 E-value=2.1 Score=39.70 Aligned_cols=31 Identities=16% Similarity=0.318 Sum_probs=27.3
Q ss_pred cEEEEec-CccHHHHHHHHHHHCCCEEEEEeC
Q 006671 417 LRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSD 447 (636)
Q Consensus 417 krVaIqG-fGNVG~~aAe~L~e~GAkVVaVSD 447 (636)
++|+|.| .|.+|+++++.|.+.|.+|++++-
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R 32 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVR 32 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEc
Confidence 4789999 699999999999999999877764
No 431
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=78.62 E-value=1.9 Score=42.43 Aligned_cols=34 Identities=29% Similarity=0.426 Sum_probs=29.6
Q ss_pred CCCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEE
Q 006671 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (636)
Q Consensus 412 ~~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaV 445 (636)
.+++|++++|.| .|-+|.++|+.|.+.|++|+.+
T Consensus 26 ~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~ 60 (281)
T 3ppi_A 26 KQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIA 60 (281)
T ss_dssp GGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred hccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEE
Confidence 368899999998 5889999999999999996654
No 432
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=78.58 E-value=2.4 Score=42.49 Aligned_cols=35 Identities=23% Similarity=0.246 Sum_probs=30.3
Q ss_pred CCCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEe
Q 006671 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (636)
Q Consensus 412 ~~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVS 446 (636)
.+++||+++|.| .|-+|.++|+.|.+.|++|+.+.
T Consensus 43 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~ 78 (291)
T 3ijr_A 43 EKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAY 78 (291)
T ss_dssp STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEe
Confidence 468999999998 58899999999999999966543
No 433
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=78.58 E-value=2.6 Score=41.72 Aligned_cols=36 Identities=19% Similarity=0.203 Sum_probs=30.9
Q ss_pred CCCCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEe
Q 006671 411 NKELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (636)
Q Consensus 411 g~~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVS 446 (636)
..+++||+++|.| .|-+|..+|+.|.+.|++|+.+.
T Consensus 6 ~~~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~ 42 (286)
T 3uve_A 6 TGRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVD 42 (286)
T ss_dssp CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CcccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEe
Confidence 3568999999998 57899999999999999976653
No 434
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=78.55 E-value=2.4 Score=42.15 Aligned_cols=35 Identities=26% Similarity=0.366 Sum_probs=30.5
Q ss_pred CCCCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEE
Q 006671 411 NKELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (636)
Q Consensus 411 g~~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaV 445 (636)
..+++||+++|.| .|-+|.++|+.|.+.|++|+.+
T Consensus 22 ~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~ 57 (277)
T 4dqx_A 22 SMDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVA 57 (277)
T ss_dssp CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred cCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEE
Confidence 3578999999998 6889999999999999997654
No 435
>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}
Probab=78.51 E-value=2.6 Score=42.49 Aligned_cols=35 Identities=26% Similarity=0.283 Sum_probs=30.6
Q ss_pred CCCCCcEEEEec---CccHHHHHHHHHHHCCCEEEEEe
Q 006671 412 KELKGLRCVVSG---SGKIAMHVLEKLIAYGAIPVSVS 446 (636)
Q Consensus 412 ~~l~GkrVaIqG---fGNVG~~aAe~L~e~GAkVVaVS 446 (636)
.+++||+++|.| .|-+|..+|+.|.+.|++|+.+.
T Consensus 5 ~~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~ 42 (319)
T 2ptg_A 5 VDLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGT 42 (319)
T ss_dssp CCCTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEE
T ss_pred cccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEe
Confidence 468899999999 48999999999999999976653
No 436
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=78.42 E-value=5.9 Score=43.54 Aligned_cols=37 Identities=24% Similarity=0.179 Sum_probs=29.9
Q ss_pred CCCCCcEEEEecCccHHHH-HHHHHHHCCCEEEEEeCCC
Q 006671 412 KELKGLRCVVSGSGKIAMH-VLEKLIAYGAIPVSVSDAK 449 (636)
Q Consensus 412 ~~l~GkrVaIqGfGNVG~~-aAe~L~e~GAkVVaVSDs~ 449 (636)
.-+++++|.+.|.|..|.. +|++|.++|++ |.+||.+
T Consensus 15 ~~~~~~~i~~iGiGg~Gms~lA~~l~~~G~~-V~~sD~~ 52 (524)
T 3hn7_A 15 LYFQGMHIHILGICGTFMGSLALLARALGHT-VTGSDAN 52 (524)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESC
T ss_pred eeecCCEEEEEEecHhhHHHHHHHHHhCCCE-EEEECCC
Confidence 4567899999999999986 69999999999 7899973
No 437
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=78.34 E-value=2.1 Score=42.06 Aligned_cols=33 Identities=27% Similarity=0.395 Sum_probs=29.3
Q ss_pred CCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEE
Q 006671 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (636)
Q Consensus 413 ~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaV 445 (636)
+++||+++|.| .|-+|.++|+.|.+.|++|+.+
T Consensus 17 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~ 50 (266)
T 4egf_A 17 RLDGKRALITGATKGIGADIARAFAAAGARLVLS 50 (266)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEE
Confidence 68899999998 5889999999999999996544
No 438
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=78.34 E-value=2.5 Score=41.56 Aligned_cols=36 Identities=28% Similarity=0.227 Sum_probs=31.2
Q ss_pred CCCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEeC
Q 006671 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSD 447 (636)
Q Consensus 412 ~~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVSD 447 (636)
.+++||+++|.| .|-+|.++|+.|.+.|++|+.+..
T Consensus 14 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~ 50 (270)
T 3is3_A 14 GRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYA 50 (270)
T ss_dssp TCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcC
Confidence 468999999998 578999999999999999876544
No 439
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=78.33 E-value=2.1 Score=42.62 Aligned_cols=34 Identities=24% Similarity=0.395 Sum_probs=28.8
Q ss_pred CCCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEE
Q 006671 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (636)
Q Consensus 412 ~~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaV 445 (636)
.+++||+++|.| .|-+|.++|+.|.+.|++|+.+
T Consensus 25 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~ 59 (277)
T 3gvc_A 25 PDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCA 59 (277)
T ss_dssp --CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEE
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEE
Confidence 368999999998 6899999999999999997654
No 440
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=78.30 E-value=1.7 Score=41.33 Aligned_cols=34 Identities=15% Similarity=0.305 Sum_probs=29.7
Q ss_pred CCCcEEEEec-CccHHHHHHHHHHHCCC--EEEEEeC
Q 006671 414 LKGLRCVVSG-SGKIAMHVLEKLIAYGA--IPVSVSD 447 (636)
Q Consensus 414 l~GkrVaIqG-fGNVG~~aAe~L~e~GA--kVVaVSD 447 (636)
+++++|+|.| .|.+|+++++.|.+.|+ +|++++-
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r 52 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGR 52 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEES
T ss_pred hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEc
Confidence 5689999998 79999999999999999 9776653
No 441
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=78.30 E-value=4 Score=42.11 Aligned_cols=33 Identities=15% Similarity=0.247 Sum_probs=29.4
Q ss_pred CCCcEEEEecCccHHHHHHHHHHHC-CCEEEEEe
Q 006671 414 LKGLRCVVSGSGKIAMHVLEKLIAY-GAIPVSVS 446 (636)
Q Consensus 414 l~GkrVaIqGfGNVG~~aAe~L~e~-GAkVVaVS 446 (636)
-.|.+|+|.|.|.||..+++.+... |++|+++.
T Consensus 185 ~~g~~VlV~GaG~vG~~avqlak~~~Ga~Vi~~~ 218 (359)
T 1h2b_A 185 YPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALD 218 (359)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEe
Confidence 3689999999999999999999988 99977665
No 442
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=78.27 E-value=1.5 Score=46.30 Aligned_cols=37 Identities=24% Similarity=0.431 Sum_probs=33.2
Q ss_pred CCCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeCCC
Q 006671 413 ELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAK 449 (636)
Q Consensus 413 ~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~ 449 (636)
.|++++|+|.|.|-+|..+|+.|...|..-+++.|.+
T Consensus 31 kL~~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D 67 (340)
T 3rui_A 31 IIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNG 67 (340)
T ss_dssp HHHTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred HHhCCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCC
Confidence 3678999999999999999999999998878888863
No 443
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Probab=78.22 E-value=2.4 Score=41.20 Aligned_cols=35 Identities=17% Similarity=0.246 Sum_probs=30.9
Q ss_pred CCCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEe
Q 006671 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (636)
Q Consensus 412 ~~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVS 446 (636)
.+++|++++|.| .|.+|.++|+.|.+.|++|+.+.
T Consensus 11 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~ 46 (247)
T 1uzm_A 11 PPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTH 46 (247)
T ss_dssp CCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred ccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 568899999998 68999999999999999977654
No 444
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=78.21 E-value=2.1 Score=43.06 Aligned_cols=35 Identities=23% Similarity=0.418 Sum_probs=29.0
Q ss_pred CCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEeC
Q 006671 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSD 447 (636)
Q Consensus 413 ~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVSD 447 (636)
.+++++|+|.| .|.+|+++++.|.+.|++|++++-
T Consensus 18 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r 53 (333)
T 2q1w_A 18 GSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDN 53 (333)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEEC
Confidence 56789999998 799999999999999999887754
No 445
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=78.17 E-value=2.5 Score=42.99 Aligned_cols=37 Identities=16% Similarity=0.202 Sum_probs=32.3
Q ss_pred CCCCCcEEEEec-CccHHHHHHHHHHH--CCCEEEEEeCC
Q 006671 412 KELKGLRCVVSG-SGKIAMHVLEKLIA--YGAIPVSVSDA 448 (636)
Q Consensus 412 ~~l~GkrVaIqG-fGNVG~~aAe~L~e--~GAkVVaVSDs 448 (636)
.++++++|.|.| .|-+|+++++.|.+ .|++|+++.-.
T Consensus 6 ~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~ 45 (362)
T 3sxp_A 6 DELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKF 45 (362)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECC
T ss_pred hhcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECC
Confidence 468899999996 69999999999999 99998877643
No 446
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=78.15 E-value=2.2 Score=42.44 Aligned_cols=35 Identities=29% Similarity=0.355 Sum_probs=30.2
Q ss_pred CCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEeCC
Q 006671 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSDA 448 (636)
Q Consensus 413 ~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVSDs 448 (636)
+++||+++|.| .|-+|..+|+.|.+.|++|+.+ |.
T Consensus 30 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~-~r 65 (275)
T 4imr_A 30 GLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILH-GV 65 (275)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEE-ES
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEE-cC
Confidence 68999999998 5889999999999999996544 44
No 447
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=78.14 E-value=2.1 Score=42.11 Aligned_cols=35 Identities=23% Similarity=0.358 Sum_probs=30.4
Q ss_pred CCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEeC
Q 006671 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSD 447 (636)
Q Consensus 413 ~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVSD 447 (636)
+++|++++|.| .|.+|..+|+.|.+.|++|+.++-
T Consensus 5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r 40 (264)
T 2dtx_A 5 DLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSI 40 (264)
T ss_dssp GGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEec
Confidence 47899999998 689999999999999999776643
No 448
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=78.14 E-value=3.7 Score=42.55 Aligned_cols=33 Identities=24% Similarity=0.415 Sum_probs=29.9
Q ss_pred CCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEe
Q 006671 414 LKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (636)
Q Consensus 414 l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVS 446 (636)
-.|.+|+|.| .|.||..+++.+...|++|+++.
T Consensus 182 ~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~ 215 (375)
T 2vn8_A 182 CTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC 215 (375)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe
Confidence 4689999999 79999999999999999988765
No 449
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=78.10 E-value=3.5 Score=42.34 Aligned_cols=34 Identities=12% Similarity=0.012 Sum_probs=30.5
Q ss_pred CC-cEEEEecC-ccHHHHHHHHHHHCCCEEEEEeCC
Q 006671 415 KG-LRCVVSGS-GKIAMHVLEKLIAYGAIPVSVSDA 448 (636)
Q Consensus 415 ~G-krVaIqGf-GNVG~~aAe~L~e~GAkVVaVSDs 448 (636)
.| .+|+|.|. |.||..+++.+...|+++|+++++
T Consensus 166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~ 201 (364)
T 1gu7_A 166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRD 201 (364)
T ss_dssp TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECC
T ss_pred CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecC
Confidence 68 99999997 999999999999999999888753
No 450
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=78.08 E-value=2 Score=49.78 Aligned_cols=31 Identities=16% Similarity=0.162 Sum_probs=27.9
Q ss_pred cEEEEecCccHHHHHHHHHHHCCCEEEEEeCC
Q 006671 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (636)
Q Consensus 417 krVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs 448 (636)
++|+|.|.|-+|...|..+...|.. |.+.|.
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a~aG~~-V~l~D~ 347 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFARVGIS-VVAVES 347 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCE-EEEECS
T ss_pred cEEEEEcccHHHHHHHHHHHhCCCc-hhcccc
Confidence 6999999999999999999999999 467776
No 451
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=78.08 E-value=2.6 Score=41.49 Aligned_cols=34 Identities=32% Similarity=0.441 Sum_probs=30.0
Q ss_pred CCCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEE
Q 006671 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (636)
Q Consensus 412 ~~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaV 445 (636)
.+++|++++|.| .|-+|.++|+.|.+.|++|+.+
T Consensus 17 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~ 51 (273)
T 1ae1_A 17 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTC 51 (273)
T ss_dssp CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEE
Confidence 468899999998 6899999999999999997654
No 452
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=78.06 E-value=6.6 Score=42.59 Aligned_cols=114 Identities=15% Similarity=0.175 Sum_probs=0.0
Q ss_pred HHHHHHHhC-CCCCCcEEEEecCccHHHHHHHHHHHCCCEEEEEeC------------CCCceeCCCCCCHHHHHHHHHH
Q 006671 403 AQLILADMN-KELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSD------------AKGYLVDEDGFDYMKISFLRDI 469 (636)
Q Consensus 403 ~~~~l~~~g-~~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSD------------s~G~IydpdGLDve~L~~L~~~ 469 (636)
++.+++.++ .+-.-++|.|.|.|++|.++|+.| +.+..|.-|=. .+-.+++-||.|.+-|
T Consensus 221 i~~~~~~~g~~~~~~~~v~I~GgG~ig~~lA~~L-~~~~~v~iIE~d~~r~~~la~~l~~~~Vi~GD~td~~~L------ 293 (461)
T 4g65_A 221 IRSVMSELQRLEKPYRRIMIVGGGNIGASLAKRL-EQTYSVKLIERNLQRAEKLSEELENTIVFCGDAADQELL------ 293 (461)
T ss_dssp HHHHHHHTTGGGSCCCEEEEECCSHHHHHHHHHH-TTTSEEEEEESCHHHHHHHHHHCTTSEEEESCTTCHHHH------
T ss_pred HHHHHHhhccccccccEEEEEcchHHHHHHHHHh-hhcCceEEEecCHHHHHHHHHHCCCceEEeccccchhhH------
Q ss_pred HhhcCCccccccccCCceeeCCCCccccccceEecCCC---cCccchhhHHHhhhcCceEEEeCCCCCCCHHHHHHHHHC
Q 006671 470 KSQQRSLRDYSKTYARSKYYDEAKPWNERCDVAFPCAS---QNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKA 546 (636)
Q Consensus 470 k~~~g~l~~y~~~~p~a~~i~~~eil~~~cDIliPcA~---~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~~iL~~r 546 (636)
..+-++ ++|+++-+.- .|.+..--|+++ +++-++==.| .++-..+++.-
T Consensus 294 ---------------~ee~i~-------~~D~~ia~T~~De~Ni~~~llAk~~---gv~kvIa~vn---~~~~~~l~~~~ 345 (461)
T 4g65_A 294 ---------------TEENID-------QVDVFIALTNEDETNIMSAMLAKRM---GAKKVMVLIQ---RGAYVDLVQGG 345 (461)
T ss_dssp ---------------HHTTGG-------GCSEEEECCSCHHHHHHHHHHHHHT---TCSEEEEECS---CHHHHHHHCSS
T ss_pred ---------------hhcCch-------hhcEEEEcccCcHHHHHHHHHHHHc---CCcccccccc---ccchhhhhhcc
Q ss_pred CceEe
Q 006671 547 NVLIA 551 (636)
Q Consensus 547 GIlvi 551 (636)
||-.+
T Consensus 346 gid~v 350 (461)
T 4g65_A 346 VIDVA 350 (461)
T ss_dssp SSCEE
T ss_pred cccee
No 453
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=78.03 E-value=2.1 Score=41.65 Aligned_cols=35 Identities=26% Similarity=0.416 Sum_probs=30.0
Q ss_pred CCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEeCC
Q 006671 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSDA 448 (636)
Q Consensus 413 ~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVSDs 448 (636)
+++|++++|.| .|.+|+++|+.|.+.|++|+.+ |.
T Consensus 3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~-~r 38 (253)
T 1hxh_A 3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFS-DI 38 (253)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEE-CS
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEE-eC
Confidence 57899999998 5899999999999999996544 44
No 454
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=78.03 E-value=2.5 Score=41.86 Aligned_cols=35 Identities=26% Similarity=0.401 Sum_probs=30.3
Q ss_pred CCCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEe
Q 006671 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (636)
Q Consensus 412 ~~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVS 446 (636)
..++|++|+|.| .|-+|.++|+.|.+.|++|+.++
T Consensus 14 ~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~ 49 (303)
T 1yxm_A 14 GLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIAS 49 (303)
T ss_dssp TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEe
Confidence 358899999997 68999999999999999976554
No 455
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=77.96 E-value=2.5 Score=41.87 Aligned_cols=34 Identities=24% Similarity=0.275 Sum_probs=29.7
Q ss_pred CCCCcEEEEecC---ccHHHHHHHHHHHCCCEEEEEe
Q 006671 413 ELKGLRCVVSGS---GKIAMHVLEKLIAYGAIPVSVS 446 (636)
Q Consensus 413 ~l~GkrVaIqGf---GNVG~~aAe~L~e~GAkVVaVS 446 (636)
+++|++++|.|. |-+|.++|+.|.+.|++|+.+.
T Consensus 18 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~ 54 (285)
T 2p91_A 18 LLEGKRALITGVANERSIAYGIAKSFHREGAQLAFTY 54 (285)
T ss_dssp TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEE
T ss_pred ccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEe
Confidence 378999999996 6999999999999999976554
No 456
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=77.94 E-value=2.1 Score=43.81 Aligned_cols=32 Identities=19% Similarity=0.310 Sum_probs=29.0
Q ss_pred CCcEEEEecCccHHHHHHHHHHHCCC-EEEEEe
Q 006671 415 KGLRCVVSGSGKIAMHVLEKLIAYGA-IPVSVS 446 (636)
Q Consensus 415 ~GkrVaIqGfGNVG~~aAe~L~e~GA-kVVaVS 446 (636)
.|.+|+|.|.|.||..+++.+...|+ +|+++.
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~ 199 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSE 199 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEC
Confidence 89999999999999999999999999 876553
No 457
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=77.91 E-value=4.3 Score=41.04 Aligned_cols=35 Identities=9% Similarity=0.175 Sum_probs=30.8
Q ss_pred CCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEeC
Q 006671 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSD 447 (636)
Q Consensus 413 ~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVSD 447 (636)
--.|.+|+|.| .|.||..+++.+...|++|++++.
T Consensus 150 ~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~ 185 (321)
T 3tqh_A 150 VKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTAS 185 (321)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEec
Confidence 34789999997 999999999999999999887753
No 458
>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}
Probab=77.91 E-value=1.6 Score=41.61 Aligned_cols=34 Identities=21% Similarity=0.127 Sum_probs=28.1
Q ss_pred CCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEe
Q 006671 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (636)
Q Consensus 413 ~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVS 446 (636)
+++||+++|.| .|-+|.++|+.|.+.|++|+.+.
T Consensus 3 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~ 37 (223)
T 3uce_A 3 GSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVAS 37 (223)
T ss_dssp --CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEES
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEec
Confidence 47899999998 58899999999999999966554
No 459
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=77.91 E-value=2.5 Score=41.81 Aligned_cols=34 Identities=15% Similarity=0.193 Sum_probs=29.6
Q ss_pred CCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEe
Q 006671 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (636)
Q Consensus 413 ~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVS 446 (636)
+++|++++|.| .|.+|.++|+.|.+.|++|+.+.
T Consensus 19 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~ 53 (277)
T 2rhc_B 19 TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCA 53 (277)
T ss_dssp CTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 47899999997 68999999999999999976553
No 460
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=77.88 E-value=2.4 Score=41.37 Aligned_cols=33 Identities=30% Similarity=0.391 Sum_probs=29.1
Q ss_pred CCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEE
Q 006671 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (636)
Q Consensus 413 ~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaV 445 (636)
+++||+++|.| .|-+|.++|+.|.+.|++|+.+
T Consensus 2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~ 35 (260)
T 2qq5_A 2 PMNGQVCVVTGASRGIGRGIALQLCKAGATVYIT 35 (260)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEE
Confidence 47899999997 6899999999999999997654
No 461
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=77.85 E-value=2.6 Score=41.22 Aligned_cols=34 Identities=26% Similarity=0.208 Sum_probs=29.5
Q ss_pred CCCCcEEEEecC---ccHHHHHHHHHHHCCCEEEEEe
Q 006671 413 ELKGLRCVVSGS---GKIAMHVLEKLIAYGAIPVSVS 446 (636)
Q Consensus 413 ~l~GkrVaIqGf---GNVG~~aAe~L~e~GAkVVaVS 446 (636)
.++|++++|.|. |-+|.++|+.|.+.|++|+.+.
T Consensus 6 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~ 42 (265)
T 1qsg_A 6 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTY 42 (265)
T ss_dssp TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEE
T ss_pred ccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEc
Confidence 378999999995 6999999999999999976553
No 462
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=77.82 E-value=1.6 Score=42.98 Aligned_cols=35 Identities=17% Similarity=0.310 Sum_probs=27.6
Q ss_pred CCCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEe
Q 006671 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (636)
Q Consensus 412 ~~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVS 446 (636)
.+++||+++|.| .|-+|.++|+.|.+.|++|+.+.
T Consensus 23 m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~ 58 (260)
T 3gem_A 23 MTLSSAPILITGASQRVGLHCALRLLEHGHRVIISY 58 (260)
T ss_dssp ----CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEE
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 468899999998 58899999999999999976554
No 463
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=77.82 E-value=2.5 Score=42.52 Aligned_cols=33 Identities=24% Similarity=0.316 Sum_probs=29.3
Q ss_pred CCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEE
Q 006671 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (636)
Q Consensus 413 ~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaV 445 (636)
+++|++|+|.| .|.+|.++|+.|.+.|++|+.+
T Consensus 28 ~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~ 61 (301)
T 3tjr_A 28 GFDGRAAVVTGGASGIGLATATEFARRGARLVLS 61 (301)
T ss_dssp CSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEE
Confidence 58999999998 5889999999999999996654
No 464
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=77.79 E-value=2.7 Score=42.14 Aligned_cols=36 Identities=14% Similarity=0.162 Sum_probs=31.0
Q ss_pred CCCCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEe
Q 006671 411 NKELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (636)
Q Consensus 411 g~~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVS 446 (636)
..+++||+++|.| .|-+|..+|+.|.+.|++|+.+.
T Consensus 23 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~ 59 (299)
T 3t7c_A 23 AGKVEGKVAFITGAARGQGRSHAITLAREGADIIAID 59 (299)
T ss_dssp CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred ccccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 3568999999998 58899999999999999976553
No 465
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=77.77 E-value=2.3 Score=42.89 Aligned_cols=36 Identities=17% Similarity=0.158 Sum_probs=30.9
Q ss_pred CCCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEeCC
Q 006671 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSDA 448 (636)
Q Consensus 412 ~~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVSDs 448 (636)
.+++||+++|.| .|-+|.++|+.|.+.|++|+.+ |.
T Consensus 37 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~-~r 73 (293)
T 3rih_A 37 FDLSARSVLVTGGTKGIGRGIATVFARAGANVAVA-AR 73 (293)
T ss_dssp TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEE-ES
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEE-EC
Confidence 578999999998 5889999999999999997654 44
No 466
>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*
Probab=77.77 E-value=2.5 Score=42.63 Aligned_cols=35 Identities=20% Similarity=0.241 Sum_probs=30.7
Q ss_pred CCCCCcEEEEecC---ccHHHHHHHHHHHCCCEEEEEe
Q 006671 412 KELKGLRCVVSGS---GKIAMHVLEKLIAYGAIPVSVS 446 (636)
Q Consensus 412 ~~l~GkrVaIqGf---GNVG~~aAe~L~e~GAkVVaVS 446 (636)
.+++||+++|.|. |-+|..+|+.|.+.|++|+.+.
T Consensus 5 ~~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~ 42 (315)
T 2o2s_A 5 IDLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGT 42 (315)
T ss_dssp CCCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEE
T ss_pred ccCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEe
Confidence 4688999999995 8999999999999999976653
No 467
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=77.71 E-value=2.5 Score=41.08 Aligned_cols=36 Identities=17% Similarity=0.132 Sum_probs=29.7
Q ss_pred CCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEeCC
Q 006671 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSDA 448 (636)
Q Consensus 413 ~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVSDs 448 (636)
++.+++++|.| .|-+|.++|+.|.+.|++|+.+...
T Consensus 4 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~ 40 (264)
T 3i4f_A 4 GRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHS 40 (264)
T ss_dssp --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred ccccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCC
Confidence 46789999998 5889999999999999998876554
No 468
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=77.68 E-value=4.5 Score=41.83 Aligned_cols=32 Identities=22% Similarity=0.344 Sum_probs=28.3
Q ss_pred CCCcEEEEecCccHHHHHHHHHHHCCC-EEEEE
Q 006671 414 LKGLRCVVSGSGKIAMHVLEKLIAYGA-IPVSV 445 (636)
Q Consensus 414 l~GkrVaIqGfGNVG~~aAe~L~e~GA-kVVaV 445 (636)
-.|.+|+|.|.|.||..+++.+...|+ +|+++
T Consensus 194 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~ 226 (376)
T 1e3i_A 194 TPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAI 226 (376)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEE
Confidence 368999999999999999999999999 66555
No 469
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=77.63 E-value=2.9 Score=41.31 Aligned_cols=34 Identities=24% Similarity=0.319 Sum_probs=30.0
Q ss_pred CCCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEE
Q 006671 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (636)
Q Consensus 412 ~~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaV 445 (636)
.+++|++++|.| .|.+|.++|+.|.+.|++|+.+
T Consensus 5 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~ 39 (270)
T 1yde_A 5 TRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVIC 39 (270)
T ss_dssp CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEE
Confidence 468899999998 6899999999999999997655
No 470
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=77.62 E-value=2.8 Score=42.01 Aligned_cols=36 Identities=22% Similarity=0.165 Sum_probs=30.2
Q ss_pred CCCCCcEEEEecC-cc--HHHHHHHHHHHCCCEEEEEeCC
Q 006671 412 KELKGLRCVVSGS-GK--IAMHVLEKLIAYGAIPVSVSDA 448 (636)
Q Consensus 412 ~~l~GkrVaIqGf-GN--VG~~aAe~L~e~GAkVVaVSDs 448 (636)
.+++||+++|.|. |. +|..+|+.|.+.|++|+.+ +.
T Consensus 27 ~~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~-~r 65 (293)
T 3grk_A 27 GLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFT-YQ 65 (293)
T ss_dssp CTTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEE-EC
T ss_pred ccCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEE-cC
Confidence 3589999999996 56 9999999999999996554 44
No 471
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=77.60 E-value=6.1 Score=40.24 Aligned_cols=34 Identities=15% Similarity=0.248 Sum_probs=26.8
Q ss_pred CCCCCcEEEEecCccHHHHHHHHHHHCCCEEEEE
Q 006671 412 KELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSV 445 (636)
Q Consensus 412 ~~l~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaV 445 (636)
.+..-++|+|.|.|++|..+|..|.+.|..|..+
T Consensus 15 ~~~~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~ 48 (318)
T 3hwr_A 15 LYFQGMKVAIMGAGAVGCYYGGMLARAGHEVILI 48 (318)
T ss_dssp -----CEEEEESCSHHHHHHHHHHHHTTCEEEEE
T ss_pred hhccCCcEEEECcCHHHHHHHHHHHHCCCeEEEE
Confidence 3456689999999999999999999999987655
No 472
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=77.54 E-value=4.3 Score=41.95 Aligned_cols=34 Identities=9% Similarity=0.140 Sum_probs=29.7
Q ss_pred CCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEeC
Q 006671 414 LKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSD 447 (636)
Q Consensus 414 l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVSD 447 (636)
-.|.+|+|.| .|.||..+++.+...|++|+++.-
T Consensus 162 ~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~ 196 (362)
T 2c0c_A 162 SEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCS 196 (362)
T ss_dssp CTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEEC
Confidence 4689999999 799999999999999999776543
No 473
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=77.53 E-value=2.1 Score=41.02 Aligned_cols=34 Identities=18% Similarity=0.296 Sum_probs=28.6
Q ss_pred CCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEeC
Q 006671 414 LKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSD 447 (636)
Q Consensus 414 l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVSD 447 (636)
++|++++|.| .|-+|.++|+.|.+.|++|+.++-
T Consensus 1 m~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r 35 (236)
T 1ooe_A 1 MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDL 35 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEES
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEec
Confidence 3688999998 689999999999999999776543
No 474
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=77.43 E-value=4.4 Score=41.67 Aligned_cols=33 Identities=24% Similarity=0.154 Sum_probs=29.4
Q ss_pred CCcEEEEecCccHHHHHHHHHHHCCCEEEEEeC
Q 006671 415 KGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSD 447 (636)
Q Consensus 415 ~GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSD 447 (636)
.|.+|+|.|.|.||..+++.+...|++|+++.-
T Consensus 179 ~g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~ 211 (360)
T 1piw_A 179 PGKKVGIVGLGGIGSMGTLISKAMGAETYVISR 211 (360)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEEES
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcC
Confidence 689999999999999999999999999776653
No 475
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=77.43 E-value=2.3 Score=41.61 Aligned_cols=31 Identities=19% Similarity=0.120 Sum_probs=26.6
Q ss_pred cEEEEecCccHHHHHHHHHHHCCCEEEEEeCC
Q 006671 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (636)
Q Consensus 417 krVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs 448 (636)
++|.|.|.|++|..+|..|.+.|..| .+.|.
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V-~~~~r 31 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQGHEV-QGWLR 31 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEE-EEECS
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCCE-EEEEc
Confidence 37999999999999999999999985 44555
No 476
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=77.39 E-value=2.8 Score=41.33 Aligned_cols=34 Identities=21% Similarity=0.238 Sum_probs=29.9
Q ss_pred CCCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEE
Q 006671 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (636)
Q Consensus 412 ~~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaV 445 (636)
.+++||+++|.| .|-+|.++|+.|.+.|++|+.+
T Consensus 7 ~~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~ 41 (277)
T 3tsc_A 7 GKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAV 41 (277)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred cccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEE
Confidence 468999999998 5889999999999999997654
No 477
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=77.39 E-value=2.7 Score=40.42 Aligned_cols=36 Identities=28% Similarity=0.314 Sum_probs=31.2
Q ss_pred CCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEeCC
Q 006671 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSDA 448 (636)
Q Consensus 413 ~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVSDs 448 (636)
.++||+++|.| .|-+|.++|+.|.+.|++|+.+.+.
T Consensus 4 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~ 40 (255)
T 3icc_A 4 MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGN 40 (255)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCC
Confidence 47899999998 5889999999999999998776554
No 478
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=77.34 E-value=2.7 Score=42.64 Aligned_cols=40 Identities=20% Similarity=0.367 Sum_probs=30.7
Q ss_pred HHhCCCCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEeCC
Q 006671 408 ADMNKELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSDA 448 (636)
Q Consensus 408 ~~~g~~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVSDs 448 (636)
+.+...|+||+++|.| .+-+|..+|+.|.+.|++| .++|.
T Consensus 21 ~~Ms~rL~gKvalVTGas~GIG~aiA~~la~~Ga~V-~i~~r 61 (273)
T 4fgs_A 21 QSMTQRLNAKIAVITGATSGIGLAAAKRFVAEGARV-FITGR 61 (273)
T ss_dssp ----CTTTTCEEEEESCSSHHHHHHHHHHHHTTCEE-EEEES
T ss_pred hhhcchhCCCEEEEeCcCCHHHHHHHHHHHHCCCEE-EEEEC
Confidence 3444569999999998 4679999999999999995 55665
No 479
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=77.34 E-value=2.2 Score=41.66 Aligned_cols=34 Identities=21% Similarity=0.237 Sum_probs=30.0
Q ss_pred CCCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEE
Q 006671 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (636)
Q Consensus 412 ~~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaV 445 (636)
.+++|++++|.| .|-+|.++|+.|.+.|++|+.+
T Consensus 8 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~ 42 (256)
T 3gaf_A 8 FHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVT 42 (256)
T ss_dssp TCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEE
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEE
Confidence 578999999998 6889999999999999996554
No 480
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=77.21 E-value=3.6 Score=45.06 Aligned_cols=32 Identities=22% Similarity=0.184 Sum_probs=27.6
Q ss_pred CcEEEEecCccHHHHHHHHHHHCCCEEEEEeCC
Q 006671 416 GLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (636)
Q Consensus 416 GkrVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs 448 (636)
-++|.|.|.|++|...|..|.+.|..| .+.|.
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~aG~~V-~l~D~ 36 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASHGHQV-LLYDI 36 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCE-EEECS
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCeE-EEEEC
Confidence 358999999999999999999999984 55665
No 481
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=77.19 E-value=2.6 Score=41.26 Aligned_cols=37 Identities=19% Similarity=0.082 Sum_probs=29.9
Q ss_pred CCCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEeCC
Q 006671 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSDA 448 (636)
Q Consensus 412 ~~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVSDs 448 (636)
.++.+++++|.| .|-+|.++|+.|.+.|++|+.+.+.
T Consensus 22 ~~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r 59 (267)
T 4iiu_A 22 SNAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHR 59 (267)
T ss_dssp ---CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 467899999998 5899999999999999998766654
No 482
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=77.18 E-value=3.8 Score=41.51 Aligned_cols=34 Identities=15% Similarity=0.102 Sum_probs=30.2
Q ss_pred CCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEeC
Q 006671 414 LKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSD 447 (636)
Q Consensus 414 l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVSD 447 (636)
-.|.+|+|.| .|.||..+++.+...|++|+++..
T Consensus 139 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~ 173 (325)
T 3jyn_A 139 KPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVS 173 (325)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEES
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 4689999999 899999999999999999877654
No 483
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=77.13 E-value=2.6 Score=41.10 Aligned_cols=33 Identities=27% Similarity=0.330 Sum_probs=29.0
Q ss_pred CCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEe
Q 006671 414 LKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (636)
Q Consensus 414 l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVS 446 (636)
++|++++|.| .|.+|.++|+.|.+.|++|+.+.
T Consensus 5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~ 38 (267)
T 2gdz_A 5 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVD 38 (267)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEE
Confidence 6789999998 69999999999999999976553
No 484
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=77.10 E-value=2.2 Score=41.83 Aligned_cols=34 Identities=35% Similarity=0.303 Sum_probs=30.1
Q ss_pred CCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEe
Q 006671 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (636)
Q Consensus 413 ~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVS 446 (636)
+++|++++|.| .|.+|.++|+.|.+.|++|+.+.
T Consensus 31 ~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~ 65 (279)
T 3ctm_A 31 SLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWY 65 (279)
T ss_dssp CCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEe
Confidence 58899999997 78999999999999999976654
No 485
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=77.09 E-value=2.9 Score=41.84 Aligned_cols=34 Identities=24% Similarity=0.308 Sum_probs=29.3
Q ss_pred CCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEeCC
Q 006671 414 LKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSDA 448 (636)
Q Consensus 414 l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVSDs 448 (636)
++||+++|.| .+-+|..+|+.|.+.|++|+ +.|.
T Consensus 9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv-~~~~ 43 (242)
T 4b79_A 9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVV-ALGL 43 (242)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEE-EEES
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEE-EEeC
Confidence 5899999998 57799999999999999954 5665
No 486
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=77.07 E-value=5.5 Score=41.52 Aligned_cols=35 Identities=11% Similarity=0.266 Sum_probs=28.2
Q ss_pred CCCcEEEEecCccHHHHHHHHHHHCCC-EEEEEeCC
Q 006671 414 LKGLRCVVSGSGKIAMHVLEKLIAYGA-IPVSVSDA 448 (636)
Q Consensus 414 l~GkrVaIqGfGNVG~~aAe~L~e~GA-kVVaVSDs 448 (636)
-.+++|+|.|.|+||+.+|..|...|. .-|.+.|.
T Consensus 7 ~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~ 42 (326)
T 3vku_A 7 KDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDI 42 (326)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeC
Confidence 457899999999999999999988775 23566665
No 487
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=76.97 E-value=2.4 Score=42.65 Aligned_cols=31 Identities=19% Similarity=0.223 Sum_probs=27.4
Q ss_pred cEEEEecCccHHHHHHHHHHHCCCEEEEEeCC
Q 006671 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (636)
Q Consensus 417 krVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs 448 (636)
++|+|.|.|++|..+|..|.+.|..| .+.|.
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~~V-~~~d~ 46 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGHTV-VLVDQ 46 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEE-EEECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeE-EEEEC
Confidence 58999999999999999999999985 56665
No 488
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=76.94 E-value=2.6 Score=41.71 Aligned_cols=34 Identities=21% Similarity=0.316 Sum_probs=29.7
Q ss_pred CCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEe
Q 006671 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (636)
Q Consensus 413 ~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVS 446 (636)
.++||+++|.| .|-+|.++|+.|.+.|++|+.+.
T Consensus 24 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~ 58 (277)
T 4fc7_A 24 LLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIAS 58 (277)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEE
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEe
Confidence 58999999998 57899999999999999976553
No 489
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=76.94 E-value=2.7 Score=41.72 Aligned_cols=35 Identities=26% Similarity=0.299 Sum_probs=30.2
Q ss_pred CCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEeCC
Q 006671 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSDA 448 (636)
Q Consensus 413 ~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVSDs 448 (636)
+++|++++|.| .|.+|..+|+.|.+.|++|+.+ |.
T Consensus 26 ~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~-~r 61 (276)
T 2b4q_A 26 SLAGRIALVTGGSRGIGQMIAQGLLEAGARVFIC-AR 61 (276)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-CS
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEE-eC
Confidence 58899999998 6899999999999999996554 44
No 490
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=76.92 E-value=2.5 Score=41.79 Aligned_cols=31 Identities=16% Similarity=0.072 Sum_probs=26.3
Q ss_pred cEEEEecCccHHHHHHHHHHHCCC--EEEEEeCC
Q 006671 417 LRCVVSGSGKIAMHVLEKLIAYGA--IPVSVSDA 448 (636)
Q Consensus 417 krVaIqGfGNVG~~aAe~L~e~GA--kVVaVSDs 448 (636)
++|.|.|+|++|..+|+.|.+.|. .| .+.|.
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V-~~~d~ 34 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKI-YGYDI 34 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEE-EEECS
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEE-EEEeC
Confidence 479999999999999999999997 64 45554
No 491
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=76.88 E-value=2.5 Score=42.03 Aligned_cols=36 Identities=28% Similarity=0.384 Sum_probs=30.5
Q ss_pred CCCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEeC
Q 006671 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSD 447 (636)
Q Consensus 412 ~~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVSD 447 (636)
.+++||+++|.| .|.+|..+|+.|.+.|++|+.++-
T Consensus 5 m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r 41 (285)
T 3sc4_A 5 MSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAK 41 (285)
T ss_dssp -CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEES
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEEC
Confidence 468999999998 588999999999999999766543
No 492
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=76.85 E-value=2.6 Score=41.91 Aligned_cols=34 Identities=21% Similarity=0.274 Sum_probs=29.4
Q ss_pred CCCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEE
Q 006671 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (636)
Q Consensus 412 ~~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaV 445 (636)
.++.||+++|.| .|-+|.++|+.|.+.|++|+.+
T Consensus 21 ~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~ 55 (281)
T 3v2h_A 21 QSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLN 55 (281)
T ss_dssp -CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEE
Confidence 368899999998 6889999999999999997654
No 493
>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}
Probab=76.77 E-value=2.4 Score=41.94 Aligned_cols=31 Identities=19% Similarity=0.297 Sum_probs=28.0
Q ss_pred CcEEEEec-CccHHHHHHHHHHHCCCEEEEEe
Q 006671 416 GLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (636)
Q Consensus 416 GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVS 446 (636)
|++|+|.| .|.+|+++++.|.+.|++|+++.
T Consensus 1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~ 32 (322)
T 2p4h_X 1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTI 32 (322)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CCEEEEECChhHHHHHHHHHHHHCCCEEEEEE
Confidence 67899998 69999999999999999988765
No 494
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=76.72 E-value=4.6 Score=40.35 Aligned_cols=34 Identities=15% Similarity=0.248 Sum_probs=29.6
Q ss_pred CCCcEEEEecC-ccHHHHHHHHHHHCCCEEEEEeC
Q 006671 414 LKGLRCVVSGS-GKIAMHVLEKLIAYGAIPVSVSD 447 (636)
Q Consensus 414 l~GkrVaIqGf-GNVG~~aAe~L~e~GAkVVaVSD 447 (636)
-.|.+|+|.|. |.||..+++.+...|++|+++.-
T Consensus 124 ~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~ 158 (302)
T 1iz0_A 124 RPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAAS 158 (302)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 36899999997 99999999999999999776543
No 495
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=76.71 E-value=2.5 Score=41.70 Aligned_cols=34 Identities=15% Similarity=0.141 Sum_probs=29.6
Q ss_pred CCCCcEEEEec-CccHHHHHHHHHHHCCCEEEEEe
Q 006671 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (636)
Q Consensus 413 ~l~GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVS 446 (636)
+++||+++|.| .|.+|.++|+.|.+.|++|+.+.
T Consensus 3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~ 37 (280)
T 1xkq_A 3 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITG 37 (280)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEe
Confidence 47899999998 68999999999999999976653
No 496
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=76.68 E-value=4.9 Score=41.12 Aligned_cols=33 Identities=18% Similarity=0.335 Sum_probs=29.3
Q ss_pred CCcEEEEe-cCccHHHHHHHHHHHCCCEEEEEeC
Q 006671 415 KGLRCVVS-GSGKIAMHVLEKLIAYGAIPVSVSD 447 (636)
Q Consensus 415 ~GkrVaIq-GfGNVG~~aAe~L~e~GAkVVaVSD 447 (636)
.|.+|+|. |.|.||..+++.+...|++|+++..
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~ 183 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTAS 183 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeC
Confidence 68999999 7999999999999999999776643
No 497
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=76.58 E-value=3.2 Score=42.37 Aligned_cols=32 Identities=22% Similarity=0.311 Sum_probs=29.1
Q ss_pred CCcEEEEecCccHHHHHHHHHHHCCC-EEEEEe
Q 006671 415 KGLRCVVSGSGKIAMHVLEKLIAYGA-IPVSVS 446 (636)
Q Consensus 415 ~GkrVaIqGfGNVG~~aAe~L~e~GA-kVVaVS 446 (636)
.|.+|+|.|.|.||..+++.+...|+ +|+++.
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~ 196 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRASGAGPILVSD 196 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEC
Confidence 89999999999999999999999999 876654
No 498
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=76.57 E-value=2.6 Score=41.76 Aligned_cols=115 Identities=10% Similarity=0.014 Sum_probs=60.1
Q ss_pred cEEEEecCccHHHHHHHHHHHCCCEEEEEeCCCCceeCCCCCCHHHHHHHHHHHhhcCCcccccccc-CCceeeCCCCcc
Q 006671 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTY-ARSKYYDEAKPW 495 (636)
Q Consensus 417 krVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs~G~IydpdGLDve~L~~L~~~k~~~g~l~~y~~~~-p~a~~i~~~eil 495 (636)
++|.|.|.|++|..+|..|.+.|..| .+.|. +.+.++.+. +..-.+......+ ......+..++.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V-~~~~r----------~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~ 69 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDV-TLIDQ----------WPAHIEAIR---KNGLIADFNGEEVVANLPIFSPEEID 69 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEE-EEECS----------CHHHHHHHH---HHCEEEEETTEEEEECCCEECGGGCC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcE-EEEEC----------CHHHHHHHH---hCCEEEEeCCCeeEecceeecchhhc
Confidence 48999999999999999999999985 45554 223332222 2211111100000 011111222222
Q ss_pred c--cccceEecCCCcCccchhhHHHhhh-c-CceEEEeCCCCCCC-HHHHHHHHHC
Q 006671 496 N--ERCDVAFPCASQNEIDQSDAINLVN-S-GCRILVEGSNMPCT-PEAVDVLKKA 546 (636)
Q Consensus 496 ~--~~cDIliPcA~~n~It~enA~~l~~-~-~akiVvEgAN~P~T-~eA~~iL~~r 546 (636)
. .+||++|-|.....+ .+-...|.. . .-++|+--.|+..+ ....+.|.+.
T Consensus 70 ~~~~~~d~vi~~v~~~~~-~~v~~~l~~~l~~~~~iv~~~~g~~~~~~l~~~~~~~ 124 (316)
T 2ew2_A 70 HQNEQVDLIIALTKAQQL-DAMFKAIQPMITEKTYVLCLLNGLGHEDVLEKYVPKE 124 (316)
T ss_dssp TTSCCCSEEEECSCHHHH-HHHHHHHGGGCCTTCEEEECCSSSCTHHHHTTTSCGG
T ss_pred ccCCCCCEEEEEeccccH-HHHHHHHHHhcCCCCEEEEecCCCCcHHHHHHHcCCc
Confidence 2 279999998876543 333444422 1 13466667776544 2333444443
No 499
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=76.46 E-value=3.3 Score=45.32 Aligned_cols=31 Identities=10% Similarity=-0.005 Sum_probs=27.9
Q ss_pred cEEEEecCccHHHHHHHHHHHCCCEEEEEeCC
Q 006671 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (636)
Q Consensus 417 krVaIqGfGNVG~~aAe~L~e~GAkVVaVSDs 448 (636)
++|+|.|.|.+|...|..|.+.|.. |.+.|.
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~~-V~l~D~ 85 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGIE-TFLVVR 85 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCE-EEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCe-EEEEEC
Confidence 6899999999999999999999998 566676
No 500
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=76.44 E-value=2.8 Score=41.89 Aligned_cols=32 Identities=19% Similarity=0.211 Sum_probs=28.9
Q ss_pred CcEEEEec-CccHHHHHHHHHHHCCCEEEEEeC
Q 006671 416 GLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSD 447 (636)
Q Consensus 416 GkrVaIqG-fGNVG~~aAe~L~e~GAkVVaVSD 447 (636)
+++|.|.| .|-+|+++++.|.+.|++|+++..
T Consensus 9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r 41 (338)
T 2rh8_A 9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVR 41 (338)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEc
Confidence 78999999 799999999999999999887654
Done!