BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006672
(636 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9MAT2|PPR10_ARATH Pentatricopeptide repeat-containing protein At1g04840
OS=Arabidopsis thaliana GN=PCMP-H64 PE=2 SV=1
Length = 665
Score = 660 bits (1702), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/638 (50%), Positives = 440/638 (68%), Gaps = 33/638 (5%)
Query: 31 ETHIISLIHSSNSTKQLRQIHAQIILHNLFASSRITTQLISSASLHKSIDYALSIFDHFT 90
E+H ISLIH+ T LR +HAQI+ + SSR+ QL+S +SL KS DY+LSIF +
Sbjct: 29 ESHFISLIHACKDTASLRHVHAQILRRGVL-SSRVAAQLVSCSSLLKSPDYSLSIFRNSE 87
Query: 91 PKNLHIFNVLIRGLAENSHFQSCISHFVFMLRLSVRPNRLTYPFVSKSVASLSLLSLGRG 150
+N + N LIRGL EN+ F+S + HF+ MLRL V+P+RLT+PFV KS + L LGR
Sbjct: 88 ERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRA 147
Query: 151 LHCLIVKSGVEYDAFVRVHLADMYVQLGKTRGAFKVFDETPEKNKSESVLLWNVLINGCS 210
LH +K+ V+ D+FVR+ L DMY + G+ + AF+VF+E+P++ K ES+L+WNVLING
Sbjct: 148 LHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYC 207
Query: 211 KIGYLRKAVELFGMMPKKNVASWVSLIDGFMRKGDLKKAGELFEQMPEKGVVSWTAMING 270
+ + A LF MP++N SW +LI G++ G+L +A +LFE MPEK VVSWT +ING
Sbjct: 208 RAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLING 267
Query: 271 FSQNGEAEKALAMFFQMLDAGVRANDFTVVSALSACAKVGALEAGVRVHNYISCNDFGLK 330
FSQ G+ E A++ +F+ML+ G++ N++T+ + LSAC+K GAL +G+R+H YI N L
Sbjct: 268 FSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLD 327
Query: 331 GAIGTALVDMYAKCGNIEAASLVFGETKEKDLLTWTAMIWGLAIHGRYEQAIQYFKKMMY 390
AIGTALVDMYAKCG ++ A+ VF KD+L+WTAMI G A+HGR+ QAIQ F++MMY
Sbjct: 328 RAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMY 387
Query: 391 SGTEPDGTVFLAILTACWYSGQVKLALNFFDSMRFDYFIEPSVKHHTVVVNLLSRVGQDS 450
SG +PD VFLA+LTAC S +V L LNFFDSMR DY IEP++KH+ +VV+LL R G+ +
Sbjct: 388 SGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLN 447
Query: 451 Q----------------------------GYQNSQNSFTKLLQLKPKHPSSYVLLSNIYA 482
+ GY+ +++ LL+L P+ SY+ L +A
Sbjct: 448 EAHELVENMPINPDLTTWAALYRACKAHKGYRRAESVSQNLLELDPELCGSYIFLDKTHA 507
Query: 483 AEGRWKDVARVRTLMQRRSIKKDPGWSYIEVNGHVHRFEAG--GHKLAKEIHSKLEDIMA 540
++G +DV + R +Q+R ++ GWSYIE++G +++F AG HKL +EI KL++I++
Sbjct: 508 SKGNIQDVEKRRLSLQKRIKERSLGWSYIELDGQLNKFSAGDYSHKLTQEIGLKLDEIIS 567
Query: 541 GAREQGYMPGTEWVLHNIKEE-KEEALGCHSEKLALAFGLIQTTPGTTIKIVKKLTICGD 599
A ++GY PG +W +H+I+EE KE G HSEKLAL G ++T PGTTI+I+K L ICGD
Sbjct: 568 LAIQKGYNPGADWSIHDIEEEEKENVTGIHSEKLALTLGFLRTAPGTTIRIIKNLRICGD 627
Query: 600 CHSLMKYASKISQREIVLRDTR-FHYFKDGTCSCRDYW 636
CHSLMKY SKISQR+I+LRD R FH+FKDG CSC DYW
Sbjct: 628 CHSLMKYVSKISQRDILLRDARQFHHFKDGRCSCGDYW 665
Score = 35.8 bits (81), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 80/195 (41%), Gaps = 6/195 (3%)
Query: 24 KPSNNITETHIISLIHSSNSTKQLRQIHAQIILHNLFASSRITTQLISSASLHKSIDYAL 83
KP N T ++S S + +IH I+ + + I T L+ + +D A
Sbjct: 290 KP-NEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAA 348
Query: 84 SIFDHFTPKNLHIFNVLIRGLAENSHFQSCISHFVFMLRLSVRPNRLTYPFVSKSVASLS 143
++F + K++ + +I+G A + F I F M+ +P+ + + V + + S
Sbjct: 349 TVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSS 408
Query: 144 LLSLGRG-LHCLIVKSGVEYDAFVRVHLADMYVQLGKTRGAFKVFDETPEKNKSESVLLW 202
+ LG + + +E V + D+ + GK A ++ + P + + W
Sbjct: 409 EVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMP---INPDLTTW 465
Query: 203 NVLINGC-SKIGYLR 216
L C + GY R
Sbjct: 466 AALYRACKAHKGYRR 480
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 424 bits (1090), Expect = e-117, Method: Compositional matrix adjust.
Identities = 260/723 (35%), Positives = 384/723 (53%), Gaps = 111/723 (15%)
Query: 21 SSHKPSNNITETHIISLIHSSNSTKQLRQIHAQII---LHNL-FASSRITTQLISSASLH 76
SS P ++I +SL+H+ + + LR IHAQ+I LHN +A S++ I S
Sbjct: 23 SSDPPYDSIRNHPSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHF- 81
Query: 77 KSIDYALSIFDHFTPKNLHIFNVLIRGLAENSHFQSCISHFVFMLRLSVRPNRLTYPFVS 136
+ + YA+S+F NL I+N + RG A +S S + +V M+ L + PN T+PFV
Sbjct: 82 EGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVL 141
Query: 137 KSVASLSLLSLGRGLHCLIVKSGVEYDAFVRVHLADMYVQLGKTRGAFKVFDETPEKN-- 194
KS A G+ +H ++K G + D +V L MYVQ G+ A KVFD++P ++
Sbjct: 142 KSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVV 201
Query: 195 -------------------------KSESVLLWNVLINGCSKIGYLRKAVELFGMMPKKN 229
+ V+ WN +I+G ++ G ++A+ELF M K N
Sbjct: 202 SYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTN 261
Query: 230 VAS--------------------------WV-------------SLIDGFMRKGDLKKAG 250
V W+ +LID + + G+L+ A
Sbjct: 262 VRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETAC 321
Query: 251 ELFEQMPEKGVVSWTAMINGFSQNGEAEKALAMFFQMLDAGVRANDFTVVSALSACAKVG 310
LFE++P K V+SW +I G++ ++AL +F +ML +G ND T++S L ACA +G
Sbjct: 322 GLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLG 381
Query: 311 ALEAGVRVHNYISCNDFGLKG-----AIGTALVDMYAKCGNIEAASLVFGETKEKDLLTW 365
A++ G +H YI D LKG ++ T+L+DMYAKCG+IEAA VF K L +W
Sbjct: 382 AIDIGRWIHVYI---DKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSW 438
Query: 366 TAMIWGLAIHGRYEQAIQYFKKMMYSGTEPDGTVFLAILTACWYSGQVKLALNFFDSMRF 425
AMI+G A+HGR + + F +M G +PD F+ +L+AC +SG + L + F +M
Sbjct: 439 NAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQ 498
Query: 426 DYFIEPSVKHHTVVVNLLSRVGQ---------------------------DSQGYQNSQN 458
DY + P ++H+ +++LL G G
Sbjct: 499 DYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGE 558
Query: 459 SFTK-LLQLKPKHPSSYVLLSNIYAAEGRWKDVARVRTLMQRRSIKKDPGWSYIEVNGHV 517
SF + L++++P++P SYVLLSNIYA+ GRW +VA+ R L+ + +KK PG S IE++ V
Sbjct: 559 SFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVV 618
Query: 518 HRFEAGG--HKLAKEIHSKLEDIMAGAREQGYMPGTEWVLHNIKEE-KEEALGCHSEKLA 574
H F G H +EI+ LE++ + G++P T VL ++EE KE AL HSEKLA
Sbjct: 619 HEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLA 678
Query: 575 LAFGLIQTTPGTTIKIVKKLTICGDCHSLMKYASKISQREIVLRD-TRFHYFKDGTCSCR 633
+AFGLI T PGT + IVK L +C +CH K SKI +REI+ RD TRFH+F+DG CSC
Sbjct: 679 IAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCN 738
Query: 634 DYW 636
DYW
Sbjct: 739 DYW 741
>sp|Q9FG16|PP367_ARATH Pentatricopeptide repeat-containing protein At5g06540
OS=Arabidopsis thaliana GN=PCMP-H88 PE=2 SV=1
Length = 622
Score = 397 bits (1020), Expect = e-109, Method: Compositional matrix adjust.
Identities = 212/642 (33%), Positives = 357/642 (55%), Gaps = 75/642 (11%)
Query: 35 ISLIHSSNSTKQLRQIHAQII----LHNLFASSRITTQLISSASLHKSID---YALSIFD 87
++L+ S +S L+ IH ++ + ++F +SR+ + ++ +K + YA IF
Sbjct: 16 LALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFS 75
Query: 88 HFTPKNLHIFNVLIRGLAENSHFQSCISHFVFMLRLSVRPNRLTYPFVSKSVASLSLLSL 147
NL +FN+LIR + + + ML+ + P+ +T+PF+ K+ + + + +
Sbjct: 76 QIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLV 135
Query: 148 GRGLHCLIVKSGVEYDAFVRVHLADMYVQLGKTRGAFKVFDETPEKNKSESVLLWNVLIN 207
G H IV+ G + D +V L MY
Sbjct: 136 GEQTHSQIVRFGFQNDVYVENSLVHMY--------------------------------- 162
Query: 208 GCSKIGYLRKAVELFGMMPKKNVASWVSLIDGFMRKGDLKKAGELFEQMPEKGVVSWTAM 267
+ G++ A +FG M ++V SW S++ G+ + G ++ A E+F++MP + + +W+ M
Sbjct: 163 --ANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIM 220
Query: 268 INGFSQNGEAEKALAMFFQMLDAGVRANDFTVVSALSACAKVGALEAGVRVHNYISCNDF 327
ING+++N EKA+ +F M GV AN+ +VS +S+CA +GALE G R + Y+ +
Sbjct: 221 INGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHM 280
Query: 328 GLKGAIGTALVDMYAKCGNIEAASLVFGETKEKDLLTWTAMIWGLAIHGRYEQAIQYFKK 387
+ +GTALVDM+ +CG+IE A VF E D L+W+++I GLA+HG +A+ YF +
Sbjct: 281 TVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQ 340
Query: 388 MMYSGTEPDGTVFLAILTACWYSGQVKLALNFFDSMRFDYFIEPSVKHHTVVVNLLSRVG 447
M+ G P F A+L+AC + G V+ L +++M+ D+ IEP ++H+ +V++L R G
Sbjct: 341 MISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAG 400
Query: 448 QDSQG-------------------------YQNSQNS---FTKLLQLKPKHPSSYVLLSN 479
+ ++ Y+N++ + L+++KP+H YVLLSN
Sbjct: 401 KLAEAENFILKMHVKPNAPILGALLGACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSN 460
Query: 480 IYAAEGRWKDVARVRTLMQRRSIKKDPGWSYIEVNGHVHRFEAGG---HKLAKEIHSKLE 536
IYA G+W + +R +M+ + +KK PGWS IE++G +++F G H +I K E
Sbjct: 461 IYACAGQWDKIESLRDMMKEKLVKKPPGWSLIEIDGKINKFTMGDDQKHPEMGKIRRKWE 520
Query: 537 DIMAGAREQGYMPGTEWVLHNI-KEEKEEALGCHSEKLALAFGLIQTTPGTTIKIVKKLT 595
+I+ R GY T ++ +EEKE ++ HSEKLA+A+G+++T PGTTI+IVK L
Sbjct: 521 EILGKIRLIGYKGNTGDAFFDVDEEEKESSIHMHSEKLAIAYGMMKTKPGTTIRIVKNLR 580
Query: 596 ICGDCHSLMKYASKISQREIVLRD-TRFHYFKDGTCSCRDYW 636
+C DCH++ K S++ RE+++RD RFH+F++G CSCRDYW
Sbjct: 581 VCEDCHTVTKLISEVYGRELIVRDRNRFHHFRNGVCSCRDYW 622
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 394 bits (1013), Expect = e-109, Method: Compositional matrix adjust.
Identities = 226/678 (33%), Positives = 362/678 (53%), Gaps = 74/678 (10%)
Query: 30 TETHIISLIHSSNSTKQLRQIHAQIILHNLFASSRITTQLISSASLHKSIDYALSIFDHF 89
+++ SLI S+ QL+QIHA++++ L S + T+LI ++S I +A +FD
Sbjct: 20 SDSFYASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDL 79
Query: 90 TPKNLHIFNVLIRGLAENSHFQSCISHFVFMLRLSVRPNRLTYPFVSKSVASLSLLSLGR 149
+ +N +IRG + N+HFQ + + M V P+ T+P + K+ + LS L +GR
Sbjct: 80 PRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGR 139
Query: 150 GLHCLIVKSGVEYDAFVRVHLADMYVQLGKTRGAFKVFDETPEKNKSESVLLWNVLINGC 209
+H + + G + D FV+ L +Y + + A VF+ P ++ ++ W +++
Sbjct: 140 FVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERT--IVSWTAIVSAY 197
Query: 210 SKIGYLRKAVELFGMMPKKNV-ASWVSLI---DGFMRKGDLK------------------ 247
++ G +A+E+F M K +V WV+L+ + F DLK
Sbjct: 198 AQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEP 257
Query: 248 -----------KAGE------LFEQMPEKGVVSWTAMINGFSQNGEAEKALAMFFQMLDA 290
K G+ LF++M ++ W AMI+G+++NG A +A+ MF +M++
Sbjct: 258 DLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINK 317
Query: 291 GVRANDFTVVSALSACAKVGALEAGVRVHNYISCNDFGLKGAIGTALVDMYAKCGNIEAA 350
VR + ++ SA+SACA+VG+LE ++ Y+ +D+ I +AL+DM+AKCG++E A
Sbjct: 318 DVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGA 377
Query: 351 SLVFGETKEKDLLTWTAMIWGLAIHGRYEQAIQYFKKMMYSGTEPDGTVFLAILTACWYS 410
LVF T ++D++ W+AMI G +HGR +AI ++ M G P+ FL +L AC +S
Sbjct: 378 RLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHS 437
Query: 411 GQVKLALNFFDSMRFDYFIEPSVKHHTVVVNLLSRVGQDSQGYQN--------------- 455
G V+ FF+ M D+ I P +H+ V++LL R G Q Y+
Sbjct: 438 GMVREGWWFFNRMA-DHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGA 496
Query: 456 -------------SQNSFTKLLQLKPKHPSSYVLLSNIYAAEGRWKDVARVRTLMQRRSI 502
+ + +L + P + YV LSN+YAA W VA VR M+ + +
Sbjct: 497 LLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGL 556
Query: 503 KKDPGWSYIEVNGHVHRFEAG--GHKLAKEIHSKLEDIMAGAREQGYMPGTEWVLHNIK- 559
KD G S++EV G + F G H +EI ++E I + +E G++ + LH++
Sbjct: 557 NKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLND 616
Query: 560 EEKEEALGCHSEKLALAFGLIQTTPGTTIKIVKKLTICGDCHSLMKYASKISQREIVLRD 619
EE EE L HSE++A+A+GLI T GT ++I K L C +CH+ K SK+ REIV+RD
Sbjct: 617 EEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRD 676
Query: 620 T-RFHYFKDGTCSCRDYW 636
T RFH+FKDG CSC DYW
Sbjct: 677 TNRFHHFKDGVCSCGDYW 694
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 394 bits (1011), Expect = e-108, Method: Compositional matrix adjust.
Identities = 230/722 (31%), Positives = 378/722 (52%), Gaps = 103/722 (14%)
Query: 18 NIKSSHKPSNNITETHIISLIHSSNSTKQLRQIHAQIILHNLFASSRITTQLISSASLHK 77
N + ++P+ N + ISLI S +QL+Q H +I F+ ++L + A+L
Sbjct: 17 NFSNPNQPTTNNERSRHISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSS 76
Query: 78 --SIDYALSIFDHFTPKNLHIFNVLIRGLAENSHFQSCISHFVFMLRLS-VRPNRLTYPF 134
S++YA +FD N +N LIR A I F+ M+ S PN+ T+PF
Sbjct: 77 FASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPF 136
Query: 135 VSKSVASLSLLSLGRGLHCLIVKSGVEYDA----------------------FVRVHLAD 172
+ K+ A +S LSLG+ LH + VKS V D F + D
Sbjct: 137 LIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKD 196
Query: 173 M---------YVQLGKTRGAFKVFDETP-------------------------------- 191
+ +VQ G A ++F +
Sbjct: 197 VVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCS 256
Query: 192 --EKNK-SESVLLWNVLINGCSKIGYLRKAVELFGMMPKKNVASWVSLIDGFMRKGDLKK 248
E+N+ + ++ L N +++ +K G + A LF M +K+ +W +++DG+ D +
Sbjct: 257 YIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEA 316
Query: 249 AGELFEQMPEKGVVSWTAMINGFSQNGEAEKALAMFFQM-LDAGVRANDFTVVSALSACA 307
A E+ MP+K +V+W A+I+ + QNG+ +AL +F ++ L ++ N T+VS LSACA
Sbjct: 317 AREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACA 376
Query: 308 KVGALEAGVRVHNYISCNDFGLKGAIGTALVDMYAKCGNIEAASLVFGETKEKDLLTWTA 367
+VGALE G +H+YI + + + +AL+ MY+KCG++E + VF +++D+ W+A
Sbjct: 377 QVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSA 436
Query: 368 MIWGLAIHGRYEQAIQYFKKMMYSGTEPDGTVFLAILTACWYSGQVKLALNFFDSMRFDY 427
MI GLA+HG +A+ F KM + +P+G F + AC ++G V A + F M +Y
Sbjct: 437 MIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNY 496
Query: 428 FIEPSVKHHTVVVNLLSRVGQDSQGYQN----------------------------SQNS 459
I P KH+ +V++L R G + + ++ +
Sbjct: 497 GIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMA 556
Query: 460 FTKLLQLKPKHPSSYVLLSNIYAAEGRWKDVARVRTLMQRRSIKKDPGWSYIEVNGHVHR 519
T+LL+L+P++ ++VLLSNIYA G+W++V+ +R M+ +KK+PG S IE++G +H
Sbjct: 557 CTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHE 616
Query: 520 FEAG--GHKLAKEIHSKLEDIMAGAREQGYMPGTEWVLHNIKEE--KEEALGCHSEKLAL 575
F +G H ++++++ KL ++M + GY P VL I+EE KE++L HSEKLA+
Sbjct: 617 FLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAI 676
Query: 576 AFGLIQTTPGTTIKIVKKLTICGDCHSLMKYASKISQREIVLRDT-RFHYFKDGTCSCRD 634
+GLI T I+++K L +CGDCHS+ K S++ REI++RD RFH+F++G CSC D
Sbjct: 677 CYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCND 736
Query: 635 YW 636
+W
Sbjct: 737 FW 738
>sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820
OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1
Length = 685
Score = 390 bits (1001), Expect = e-107, Method: Compositional matrix adjust.
Identities = 225/683 (32%), Positives = 354/683 (51%), Gaps = 75/683 (10%)
Query: 25 PSNNITETHIISLIHSSNSTKQLRQIHAQIILHNLFASSRITTQLISSASLHKSIDYALS 84
PS I +LI + + L+QIH +I H+L + + L+ + Y+
Sbjct: 7 PSATSKVQQIKTLISVACTVNHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYL 66
Query: 85 IFDHFTPKNLHIFNVLIRGLAENSHFQSCISHFVFMLRLSVRPNRLTYPFVSKSVASLSL 144
+F H N+ ++N LI G N F + F+ + + + + T+P V K+ S
Sbjct: 67 LFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASS 126
Query: 145 LSLGRGLHCLIVKSGVEYDAFVRVHLADMYVQLGKTRGAFKVFDETPEKNKSESVLLWNV 204
LG LH L+VK G +D L +Y G+ A K+FDE P++ SV+ W
Sbjct: 127 RKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDR----SVVTWTA 182
Query: 205 LINGCSKIGYLRKAVELFGMMPKKNV----------------------ASWV-------- 234
L +G + G R+A++LF M + V W+
Sbjct: 183 LFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEME 242
Query: 235 ---------SLIDGFMRKGDLKKAGELFEQMPEKGVVSWTAMINGFSQNGEAEKALAMFF 285
+L++ + + G ++KA +F+ M EK +V+W+ MI G++ N ++ + +F
Sbjct: 243 MQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFL 302
Query: 286 QMLDAGVRANDFTVVSALSACAKVGALEAGVRVHNYISCNDFGLKGAIGTALVDMYAKCG 345
QML ++ + F++V LS+CA +GAL+ G + I ++F + AL+DMYAKCG
Sbjct: 303 QMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCG 362
Query: 346 NIEAASLVFGETKEKDLLTWTAMIWGLAIHGRYEQAIQYFKKMMYSGTEPDGTVFLAILT 405
+ VF E KEKD++ A I GLA +G + + F + G PDG+ FL +L
Sbjct: 363 AMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLC 422
Query: 406 ACWYSGQVKLALNFFDSMRFDYFIEPSVKHHTVVVNLLSRVGQDSQGY------------ 453
C ++G ++ L FF+++ Y ++ +V+H+ +V+L R G Y
Sbjct: 423 GCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNA 482
Query: 454 ----------------QNSQNSFTKLLQLKPKHPSSYVLLSNIYAAEGRWKDVARVRTLM 497
Q ++ +L+ L+P + +YV LSNIY+ GRW + A VR +M
Sbjct: 483 IVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMM 542
Query: 498 QRRSIKKDPGWSYIEVNGHVHRFEAG--GHKLAKEIHSKLEDIMAGAREQGYMPGTEWVL 555
++ +KK PG+S+IE+ G VH F A H L+ +I++KLED+ R G++P TE+V
Sbjct: 543 NKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVF 602
Query: 556 HNI-KEEKEEALGCHSEKLALAFGLIQTTPGTTIKIVKKLTICGDCHSLMKYASKISQRE 614
++ +EEKE LG HSEKLA+A GLI T G I++VK L +CGDCH +MK SKI++RE
Sbjct: 603 FDVEEEEKERVLGYHSEKLAVALGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITRRE 662
Query: 615 IVLRD-TRFHYFKDGTCSCRDYW 636
IV+RD RFH F +G+CSC DYW
Sbjct: 663 IVVRDNNRFHCFTNGSCSCNDYW 685
>sp|Q9SZT8|PP354_ARATH Pentatricopeptide repeat-containing protein At4g37380,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H48 PE=3
SV=1
Length = 632
Score = 388 bits (996), Expect = e-107, Method: Compositional matrix adjust.
Identities = 221/637 (34%), Positives = 347/637 (54%), Gaps = 76/637 (11%)
Query: 37 LIHSSNSTKQLRQIHAQIILHNLFASSR---ITTQLISSASLHKSIDYALSIFDHFTPKN 93
LI S S ++ QIHA I+ HNL R + +L + + H I ++L++F +
Sbjct: 35 LIDKSQSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPD 94
Query: 94 LHIFNVLIRGLAENSHFQSCISHFVFMLRLSVRPNRLTYPFVSKSVASLSLLSLGRGLHC 153
L +F I + N +V +L + PN T+ + KS ++ S G+ +H
Sbjct: 95 LFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCSTKS----GKLIHT 150
Query: 154 LIVKSGVEYDAFVRVHLADMYVQLGKTRGAFKVFDETPEKNKSESVLLWNVLINGCSKIG 213
++K G+ D +V L D+Y + G A KVFD
Sbjct: 151 HVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDR------------------------ 186
Query: 214 YLRKAVELFGMMPKKNVASWVSLIDGFMRKGDLKKAGELFEQMPEKGVVSWTAMINGFSQ 273
MP++++ S ++I + ++G+++ A LF+ M E+ +VSW MI+G++Q
Sbjct: 187 -----------MPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQ 235
Query: 274 NGEAEKALAMFFQMLDAG-VRANDFTVVSALSACAKVGALEAGVRVHNYISCNDFGLKGA 332
+G AL +F ++L G + ++ TVV+ALSAC+++GALE G +H ++ + L
Sbjct: 236 HGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVK 295
Query: 333 IGTALVDMYAKCGNIEAASLVFGETKEKDLLTWTAMIWGLAIHGRYEQAIQYFKKMM-YS 391
+ T L+DMY+KCG++E A LVF +T KD++ W AMI G A+HG + A++ F +M +
Sbjct: 296 VCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGIT 355
Query: 392 GTEPDGTVFLAILTACWYSGQVKLALNFFDSMRFDYFIEPSVKHHTVVVNLLSRVGQDSQ 451
G +P F+ L AC ++G V + F+SM +Y I+P ++H+ +V+LL R GQ +
Sbjct: 356 GLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKR 415
Query: 452 GYQNSQNSFTK----------------------------LLQLKPKHPSSYVLLSNIYAA 483
Y+ +N L+ L K+ YVLLSNIYA+
Sbjct: 416 AYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYAS 475
Query: 484 EGRWKDVARVRTLMQRRSIKKDPGWSYIEVNGHVHRFEAGG--HKLAKEIHSKLEDIMAG 541
G ++ VA+VR LM+ + I K+PG S IE+ VH F AG H +KEI++ L I
Sbjct: 476 VGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISER 535
Query: 542 AREQGYMPGTEWVLHNIKE-EKEEALGCHSEKLALAFGLIQTTPGTTIKIVKKLTICGDC 600
+ GY+P T VL +++E EKE++L HSE+LA+A+GLI T PG+ +KI K L +C DC
Sbjct: 536 IKSHGYVPNTNTVLQDLEETEKEQSLQVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDC 595
Query: 601 HSLMKYASKISQREIVLRD-TRFHYFKDGTCSCRDYW 636
H++ K SKI+ R+IV+RD RFH+F DG+CSC D+W
Sbjct: 596 HTVTKLISKITGRKIVMRDRNRFHHFTDGSCSCGDFW 632
>sp|Q9CA54|PP122_ARATH Pentatricopeptide repeat-containing protein At1g74630
OS=Arabidopsis thaliana GN=PCMP-H71 PE=2 SV=1
Length = 643
Score = 386 bits (991), Expect = e-106, Method: Compositional matrix adjust.
Identities = 225/641 (35%), Positives = 357/641 (55%), Gaps = 41/641 (6%)
Query: 33 HIISLIHSSNSTKQLRQIHAQIILHNLFASSRITTQLI--SSASLHKSIDYALSIFDHFT 90
H +SL++S + + L QIH I + + S T +LI + S+ ++ YA + F
Sbjct: 7 HCLSLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFP 66
Query: 91 PKNLHIFNVLIRGLAENSHFQSCISHFVFMLRLS-VRPNRLTYPFVSKSVASLSLLSLGR 149
+ +FN L+RG +E+ + ++ FV M+R V P+ ++ FV K+V + L G
Sbjct: 67 EPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGF 126
Query: 150 GLHCLIVKSGVEYDAFVRVHLADMYVQLGKTRGAFKVFDETPEKNKSESVLLWNVLINGC 209
+HC +K G+E FV L MY G A KVFDE + N ++ WN +I C
Sbjct: 127 QMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPN----LVAWNAVITAC 182
Query: 210 SKIGYLRKAVELFGMMPKKNVASWVSLIDGFMRKGDLKKAGELFEQMPEKGVVSWTAMIN 269
+ + A E+F M +N SW ++ G+++ G+L+ A +F +MP + VSW+ MI
Sbjct: 183 FRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIV 242
Query: 270 GFSQNGEAEKALAMFFQMLDAGVRANDFTVVSALSACAKVGALEAGVRVHNYISCNDFGL 329
G + NG ++ F ++ AG+ N+ ++ LSAC++ G+ E G +H ++ +
Sbjct: 243 GIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSW 302
Query: 330 KGAIGTALVDMYAKCGNIEAASLVFGETKEKD-LLTWTAMIWGLAIHGRYEQAIQYFKKM 388
++ AL+DMY++CGN+ A LVF +EK +++WT+MI GLA+HG+ E+A++ F +M
Sbjct: 303 IVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEM 362
Query: 389 MYSGTEPDGTVFLAILTACWYSGQVKLALNFFDSMRFDYFIEPSVKHHTVVVNLLSRVGQ 448
G PDG F+++L AC ++G ++ ++F M+ Y IEP ++H+ +V+L R G+
Sbjct: 363 TAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGK 422
Query: 449 DSQGY----------------------------QNSQNSFTKLLQLKPKHPSSYVLLSNI 480
+ Y + ++ +L +L P + VLLSN
Sbjct: 423 LQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNA 482
Query: 481 YAAEGRWKDVARVRTLMQRRSIKKDPGWSYIEVNGHVHRFEAGGHK--LAKEIHSKLEDI 538
YA G+WKDVA +R M + IKK WS +EV +++F AG K + E H KL++I
Sbjct: 483 YATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEI 542
Query: 539 MAGAR-EQGYMPGTEWVLHNI-KEEKEEALGCHSEKLALAFGLIQTTPGTTIKIVKKLTI 596
+ + E GY P L+++ +EEKE+ + HSEKLALAF L + + G I+IVK L I
Sbjct: 543 ILRLKDEAGYTPEVASALYDVEEEEKEDQVSKHSEKLALAFALARLSKGANIRIVKNLRI 602
Query: 597 CGDCHSLMKYASKISQREIVLRD-TRFHYFKDGTCSCRDYW 636
C DCH++MK SK+ EI++RD RFH FKDG+CSCRDYW
Sbjct: 603 CRDCHAVMKLTSKVYGVEILVRDRNRFHSFKDGSCSCRDYW 643
>sp|Q9FI80|PP425_ARATH Pentatricopeptide repeat-containing protein At5g48910
OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1
Length = 646
Score = 383 bits (983), Expect = e-105, Method: Compositional matrix adjust.
Identities = 230/648 (35%), Positives = 343/648 (52%), Gaps = 80/648 (12%)
Query: 38 IHSSNSTKQLRQIHAQII----LHNLFASSRITTQLISSASLHKSIDYALSIFDHFTPKN 93
I++ + + L QIHA I + + A++ I +S H+ +DYA IF+ +N
Sbjct: 30 INNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRN 89
Query: 94 LHIFNVLIRGLAENSHFQSCISHFVFMLRLS---VRPNRLTYPFVSKSVASLSLLSLGRG 150
+N +IRG +E+ ++ I+ +F +S V PNR T+P V K+ A + G+
Sbjct: 90 CFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQ 149
Query: 151 LHCLIVKSGVEYDAFVRVHLADMYVQLGKTRGAFKVFDE----------TPEKNKSESVL 200
+H L +K G D FV +L MYV G + A +F + T + + ++
Sbjct: 150 IHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIV 209
Query: 201 LWNVLINGCSKIGYLRKAVELFGMMPKKNVASWVSLIDGFMRKGDLKKAGELFEQMPEKG 260
LWNV+I DG+MR GD K A LF++M ++
Sbjct: 210 LWNVMI-------------------------------DGYMRLGDCKAARMLFDKMRQRS 238
Query: 261 VVSWTAMINGFSQNGEAEKALAMFFQMLDAGVRANDFTVVSALSACAKVGALEAGVRVHN 320
VVSW MI+G+S NG + A+ +F +M +R N T+VS L A +++G+LE G +H
Sbjct: 239 VVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHL 298
Query: 321 YISCNDFGLKGAIGTALVDMYAKCGNIEAASLVFGETKEKDLLTWTAMIWGLAIHGRYEQ 380
Y + + +G+AL+DMY+KCG IE A VF ++++TW+AMI G AIHG+
Sbjct: 299 YAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGD 358
Query: 381 AIQYFKKMMYSGTEPDGTVFLAILTACWYSGQVKLALNFFDSMRFDYFIEPSVKHHTVVV 440
AI F KM +G P ++ +LTAC + G V+ +F M +EP ++H+ +V
Sbjct: 359 AIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMV 418
Query: 441 NLLSRVGQDSQGYQNSQNSFTK----------------------------LLQLKPKHPS 472
+LL R G + + N K L+ + P
Sbjct: 419 DLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSG 478
Query: 473 SYVLLSNIYAAEGRWKDVARVRTLMQRRSIKKDPGWSYIEVNGHVHRF--EAGGHKLAKE 530
+YV LSN+YA++G W +V+ +R M+ + I+KDPG S I+++G +H F E H AKE
Sbjct: 479 AYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKE 538
Query: 531 IHSKLEDIMAGAREQGYMPGTEWVLHNIKEE-KEEALGCHSEKLALAFGLIQTTPGTTIK 589
I+S L +I R GY P T VL N++EE KE L HSEK+A AFGLI T+PG I+
Sbjct: 539 INSMLVEISDKLRLAGYRPITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIR 598
Query: 590 IVKKLTICGDCHSLMKYASKISQREIVLRD-TRFHYFKDGTCSCRDYW 636
IVK L IC DCHS +K SK+ +R+I +RD RFH+F+DG+CSC DYW
Sbjct: 599 IVKNLRICEDCHSSIKLISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 646
>sp|Q9CAY1|PP223_ARATH Putative pentatricopeptide repeat-containing protein At3g11460
OS=Arabidopsis thaliana GN=PCMP-H52 PE=3 SV=1
Length = 623
Score = 362 bits (930), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 209/611 (34%), Positives = 318/611 (52%), Gaps = 79/611 (12%)
Query: 97 FNVLIRGLAENSHFQSCISHFVFMLRLSVRPNRLTYPFVSKSVASLSLLSLGRGLHCLIV 156
+NV +R LA S F IS + MLR P+ ++PF+ KS ASLSL G+ LHC +
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 157 KSGVEYDAFVRVHLADMYVQLGKTRGAFKVFDETPEKNKSESVLLWNVLINGCS------ 210
K G E + FV L MY + G A KVF+E P+ S+ + +N LI+G +
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQS--SQLSVCYNALISGYTANSKVT 138
Query: 211 ----------KIGYLRKAVELFGMMPKKNVASWV-----------------------SLI 237
+ G +V + G++P V ++ S I
Sbjct: 139 DAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFI 198
Query: 238 DGFMRKGDLKKAGELFEQMPEKGVVSWTAMINGFSQNGEAEKALAMFFQMLDAGVRANDF 297
+M+ G ++ LF++MP KG+++W A+I+G+SQNG A L ++ QM +GV + F
Sbjct: 199 TMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPF 258
Query: 298 TVVSALSACAKVGALEAGVRVHNYISCNDFGLKGAIGTALVDMYAKCGNIEAASLVFGET 357
T+VS LS+CA +GA + G V + N F + A + MYA+CGN+ A VF
Sbjct: 259 TLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIM 318
Query: 358 KEKDLLTWTAMIWGLAIHGRYEQAIQYFKKMMYSGTEPDGTVFLAILTACWYSGQVKLAL 417
K L++WTAMI +HG E + F M+ G PDG VF+ +L+AC +SG L
Sbjct: 319 PVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGL 378
Query: 418 NFFDSMRFDYFIEPSVKHHTVVVNLLSRVGQDSQGYQ----------------------- 454
F +M+ +Y +EP +H++ +V+LL R G+ + +
Sbjct: 379 ELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKI 438
Query: 455 -----NSQNSFTKLLQLKPKHPSSYVLLSNIYAAEGRWKDVARVRTLMQRRSIKKDPGWS 509
++ +F K+++ +P + YVL+SNIY+ + + R+R +M+ R+ +K PG+S
Sbjct: 439 HKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYS 498
Query: 510 YIEVNGHVHRFEAG--GHKLAKEIHSKLEDIMAGARE-QGYMPGTEWVLHNIKEEKEEAL 566
Y+E G VH F AG H+ +E+H L+++ E G M EE
Sbjct: 499 YVEHKGRVHLFLAGDRSHEQTEEVHRMLDELETSVMELAGNMDCDR------GEEVSSTT 552
Query: 567 GCHSEKLALAFGLIQTTPGTTIKIVKKLTICGDCHSLMKYASKISQREIVLRD-TRFHYF 625
HSE+LA+AFG++ + PGT I ++K L +C DCH +K SKI R+ V+RD +RFHYF
Sbjct: 553 REHSERLAIAFGILNSIPGTEILVIKNLRVCEDCHVFLKQVSKIVDRQFVVRDASRFHYF 612
Query: 626 KDGTCSCRDYW 636
KDG CSC+DYW
Sbjct: 613 KDGVCSCKDYW 623
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 99/403 (24%), Positives = 165/403 (40%), Gaps = 53/403 (13%)
Query: 48 RQIHAQIILHNLFASSRITTQLISSASLHKSIDYALSIFDHFTPKNLHI---FNVLIRGL 104
+Q+H + + T LIS + A +F+ P++ + +N LI G
Sbjct: 73 QQLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEE-NPQSSQLSVCYNALISGY 131
Query: 105 AENSHFQSCISHFVFMLRLSVRPNRLTYPFVSKSVASLSLLSLGRGLHCLIVKSGVEYDA 164
NS F M V + +T + L LGR LH VK G++ +
Sbjct: 132 TANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEV 191
Query: 165 FVRVHLADMYVQLGKTRGAFKVFDETPEKNKSESVLLWNVLINGCSKIGYLRKAVELFGM 224
V MY++ G ++FDE P K ++ WN +I+G S+ G +EL+
Sbjct: 192 AVLNSFITMYMKCGSVEAGRRLFDEMPVKG----LITWNAVISGYSQNGLAYDVLELYEQ 247
Query: 225 MPKKNVA----SWVSLI---------------------DGFM--------------RKGD 245
M V + VS++ +GF+ R G+
Sbjct: 248 MKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGN 307
Query: 246 LKKAGELFEQMPEKGVVSWTAMINGFSQNGEAEKALAMFFQMLDAGVRANDFTVVSALSA 305
L KA +F+ MP K +VSWTAMI + +G E L +F M+ G+R + V LSA
Sbjct: 308 LAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSA 367
Query: 306 CAKVGALEAGVRVHNYISCNDFGLKGAIG--TALVDMYAKCGNI-EAASLVFGETKEKDL 362
C+ G + G+ + + ++ L+ + LVD+ + G + EA + E D
Sbjct: 368 CSHSGLTDKGLELFRAMK-REYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDG 426
Query: 363 LTWTAMIWGLAIHGRYEQAIQYFKKMMYSGTEPDGTVFLAILT 405
W A++ IH + A F K++ EP+ + +++
Sbjct: 427 AVWGALLGACKIHKNVDMAELAFAKVIE--FEPNNIGYYVLMS 467
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 361 bits (926), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 217/664 (32%), Positives = 354/664 (53%), Gaps = 83/664 (12%)
Query: 48 RQIHAQIILHNLFASSRITTQLISSASLHKSIDYALSIFDHFTPKNLHIFNVLIRGLAEN 107
+Q+H + L ++ LI+ + +A ++FD+ + ++L +N +I G+A+N
Sbjct: 335 QQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQN 394
Query: 108 SHFQSCISHFVFMLRLSVRPNRLTYPFVSKSVASLSL-LSLGRGLHCLIVKSGVEYDAFV 166
+ F+ +LR ++P++ T V K+ +SL LSL + +H +K D+FV
Sbjct: 395 GLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFV 454
Query: 167 RVHLADMYVQLGKTRGAFKVFDETPEKNKSESVLLWNVLINGCSKIGYLRKAVELFGMMP 226
L D Y + + A +F+ + ++ WN ++ G ++ K ++LF +M
Sbjct: 455 STALIDAYSRNRCMKEAEILFER-----HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMH 509
Query: 227 KKNVAS-------------------------------------WVS--LIDGFMRKGDLK 247
K+ S WVS ++D +++ GD+
Sbjct: 510 KQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMS 569
Query: 248 KAGELFEQMPEKGVVSWTAMINGFSQNGEAEKALAMFFQMLDAGVRANDFTVVSALSACA 307
A F+ +P V+WT MI+G +NGE E+A +F QM GV ++FT+ + A +
Sbjct: 570 AAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASS 629
Query: 308 KVGALEAGVRVHN---YISCNDFGLKGAIGTALVDMYAKCGNIEAASLVFGETKEKDLLT 364
+ ALE G ++H ++C + +GT+LVDMYAKCG+I+ A +F + ++
Sbjct: 630 CLTALEQGRQIHANALKLNCTN---DPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITA 686
Query: 365 WTAMIWGLAIHGRYEQAIQYFKKMMYSGTEPDGTVFLAILTACWYSGQVKLALNFFDSMR 424
W AM+ GLA HG ++ +Q FK+M G +PD F+ +L+AC +SG V A SM
Sbjct: 687 WNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMH 746
Query: 425 FDYFIEPSVKHHTVVVNLLSRVGQDSQG----------------------------YQNS 456
DY I+P ++H++ + + L R G Q +
Sbjct: 747 GDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETG 806
Query: 457 QNSFTKLLQLKPKHPSSYVLLSNIYAAEGRWKDVARVRTLMQRRSIKKDPGWSYIEVNGH 516
+ TKLL+L+P S+YVLLSN+YAA +W ++ RT+M+ +KKDPG+S+IEV
Sbjct: 807 KRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNK 866
Query: 517 VHRF--EAGGHKLAKEIHSKLEDIMAGAREQGYMPGTEWVLHNI-KEEKEEALGCHSEKL 573
+H F + ++ + I+ K++D++ +++GY+P T++ L ++ +EEKE AL HSEKL
Sbjct: 867 IHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKL 926
Query: 574 ALAFGLIQTTPGTTIKIVKKLTICGDCHSLMKYASKISQREIVLRD-TRFHYFKDGTCSC 632
A+AFGL+ T P T I+++K L +CGDCH+ MKY +K+ REIVLRD RFH FKDG CSC
Sbjct: 927 AVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGICSC 986
Query: 633 RDYW 636
DYW
Sbjct: 987 GDYW 990
Score = 105 bits (263), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 91/373 (24%), Positives = 168/373 (45%), Gaps = 26/373 (6%)
Query: 51 HAQIILHNLFASSRITTQLISSASLHKSIDYALSIFDHFTPKNLHIFNVLIRGLAENS-- 108
HA+I+ + LIS S S+ YA +FD ++L +N ++ A++S
Sbjct: 62 HARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSEC 121
Query: 109 ---HFQSCISHFVFMLRLSVRPNRLTYPFVSKSVASLSLLSLGRGLHCLIVKSGVEYDAF 165
+ Q F + + V +R+T + K + H K G++ D F
Sbjct: 122 VVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEF 181
Query: 166 VRVHLADMYVQLGKTRGAFKVFDETPEKNKSESVLLWNVLINGCSKIGYLRKAVEL---- 221
V L ++Y++ GK + +F+E P ++ V+LWN+++ ++G+ +A++L
Sbjct: 182 VAGALVNIYLKFGKVKEGKVLFEEMPYRD----VVLWNLMLKAYLEMGFKEEAIDLSSAF 237
Query: 222 --FGMMPKKNVASWVSLIDGFMRKGDLKKAGEL--FEQMPEKGVVSWTAMIN-GFSQ--- 273
G+ P + ++ I GD AG++ F + VS N G S+
Sbjct: 238 HSSGLNPNEITLRLLARI-----SGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLH 292
Query: 274 NGEAEKALAMFFQMLDAGVRANDFTVVSALSACAKVGALEAGVRVHNYISCNDFGLKGAI 333
+G+ L F M+++ V + T + L+ KV +L G +VH L +
Sbjct: 293 SGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTV 352
Query: 334 GTALVDMYAKCGNIEAASLVFGETKEKDLLTWTAMIWGLAIHGRYEQAIQYFKKMMYSGT 393
+L++MY K A VF E+DL++W ++I G+A +G +A+ F +++ G
Sbjct: 353 SNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGL 412
Query: 394 EPDGTVFLAILTA 406
+PD ++L A
Sbjct: 413 KPDQYTMTSVLKA 425
Score = 60.1 bits (144), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/291 (21%), Positives = 118/291 (40%), Gaps = 28/291 (9%)
Query: 43 STKQLRQIHAQIILH----NLFASSRITTQLISSASLHKSIDYALSIFDHFTPKNLHIFN 98
+ Q +Q+HA I +L+ SS I + + A FD + +
Sbjct: 532 AINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSA----AQFAFDSIPVPDDVAWT 587
Query: 99 VLIRGLAENSHFQSCISHFVFMLRLSVRPNRLTYPFVSKSVASLSLLSLGRGLHCLIVKS 158
+I G EN + F M + V P+ T ++K+ + L+ L GR +H +K
Sbjct: 588 TMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKL 647
Query: 159 GVEYDAFVRVHLADMYVQLGKTRGAFKVFDETPEKNKSESVLLWNVLINGCSKIGYLRKA 218
D FV L DMY + G A+ +F N + WN ++ G ++ G ++
Sbjct: 648 NCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMN----ITAWNAMLVGLAQHGEGKET 703
Query: 219 VELFGMMP----KKNVASWVSLIDGFMRKGDLKKAGELFEQM-------PEKGVVSWTAM 267
++LF M K + +++ ++ G + +A + M PE + ++ +
Sbjct: 704 LQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPE--IEHYSCL 761
Query: 268 INGFSQNGEAEKALAMFFQMLDAGVRANDFTVVSALSACAKVGALEAGVRV 318
+ + G ++A + M + A+ + L+AC G E G RV
Sbjct: 762 ADALGRAGLVKQAENLIESM---SMEASASMYRTLLAACRVQGDTETGKRV 809
Score = 59.7 bits (143), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 96/240 (40%), Gaps = 47/240 (19%)
Query: 165 FVRVHLADMYVQLGK-TRGAFKVFDETPEKNKSESVLLWNVLINGCSKIGYLRKAVELFG 223
F+R + + LGK T F+E PE+ L N LI+ SK G L A +F
Sbjct: 45 FLRNAITSSDLMLGKCTHARILTFEENPER------FLINNLISMYSKCGSLTYARRVFD 98
Query: 224 MMPKKNVASWVSLIDGFMRKGDLKKAGELFEQMPEKGVVSWTAMINGFSQNGEA-----E 278
MP +++ VSW +++ ++Q+ E +
Sbjct: 99 KMPDRDL-------------------------------VSWNSILAAYAQSSECVVENIQ 127
Query: 279 KALAMFFQMLDAGVRANDFTVVSALSACAKVGALEAGVRVHNYISCNDFGLKGA--IGTA 336
+A +F + V + T+ L C G + A H Y +C GL G + A
Sbjct: 128 QAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGY-ACK-IGLDGDEFVAGA 185
Query: 337 LVDMYAKCGNIEAASLVFGETKEKDLLTWTAMIWGLAIHGRYEQAIQYFKKMMYSGTEPD 396
LV++Y K G ++ ++F E +D++ W M+ G E+AI SG P+
Sbjct: 186 LVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPN 245
>sp|Q683I9|PP295_ARATH Pentatricopeptide repeat-containing protein At3g62890
OS=Arabidopsis thaliana GN=PCMP-H82 PE=2 SV=1
Length = 573
Score = 355 bits (912), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 215/602 (35%), Positives = 329/602 (54%), Gaps = 80/602 (13%)
Query: 79 IDYALSIFDHFTPKNLHIF--NVLIRGLAEN---SHFQSCISHFVFMLRLSVRPNRLTYP 133
I YA IF H L F N++IR + N S IS ++ M V P+ T+P
Sbjct: 8 IAYANPIF-HIRHLKLESFLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFP 66
Query: 134 FVSKSVASLSLLSLGRGLHCLIVKSGVEYDAFVRVHLADMYVQLGKTRGAFKVFDETPEK 193
F+ S + L LG+ H I+ G++ D FVR L +MY
Sbjct: 67 FLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMY------------------- 107
Query: 194 NKSESVLLWNVLINGCSKIGYLRKAVELFGMMPKKNVASWVSLIDGFMRKGDLKKAGELF 253
S G LR A +F K++ +W S+++ + + G + A +LF
Sbjct: 108 ----------------SSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLF 151
Query: 254 EQMPEKGVVSWTAMINGFSQNGEAEKALAMFFQML-----DAGVRANDFTVVSALSACAK 308
++MPE+ V+SW+ +ING+ G+ ++AL +F +M +A VR N+FT+ + LSAC +
Sbjct: 152 DEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGR 211
Query: 309 VGALEAGVRVHNYISCNDFGLKGAIGTALVDMYAKCGNIEAASLVFGET-KEKDLLTWTA 367
+GALE G VH YI + +GTAL+DMYAKCG++E A VF +KD+ ++A
Sbjct: 212 LGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSA 271
Query: 368 MIWGLAIHGRYEQAIQYFKKMMYSGT-EPDGTVFLAILTACWYSGQVKLALNFFDSMRFD 426
MI LA++G ++ Q F +M S P+ F+ IL AC + G + ++F M +
Sbjct: 272 MICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEE 331
Query: 427 YFIEPSVKHHTVVVNLLSRVG--QDSQGY--------------------------QNSQN 458
+ I PS++H+ +V+L R G ++++ + + +
Sbjct: 332 FGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEG 391
Query: 459 SFTKLLQLKPKHPSSYVLLSNIYAAEGRWKDVARVRTLMQRRSIKKDPGWSYIEVNGHVH 518
+ +L++L P + +YVLLSN+YA GRW +V +R M+ + I K PG SY+EV G VH
Sbjct: 392 ALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSYVEVEGVVH 451
Query: 519 RFEAG--GHKLAKEIHSKLEDIMAGAREQGYMPGTEWVLHNIKE-EKEEALGCHSEKLAL 575
F G + ++ I++ L++IM RE GY+ T+ VL ++ E +KE AL HSEKLA+
Sbjct: 452 EFVVGDESQQESERIYAMLDEIMQRLREAGYVTDTKEVLLDLNEKDKEIALSYHSEKLAI 511
Query: 576 AFGLIQTTPGTTIKIVKKLTICGDCHSLMKYASKISQREIVLRD-TRFHYFKDGTCSCRD 634
AF L++T PGT ++I+K L ICGDCH +MK SK+ REIV+RD RFH+F+DG+CSCRD
Sbjct: 512 AFCLMKTRPGTPVRIIKNLRICGDCHLVMKMISKLFSREIVVRDCNRFHHFRDGSCSCRD 571
Query: 635 YW 636
+W
Sbjct: 572 FW 573
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 355 bits (910), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 215/657 (32%), Positives = 346/657 (52%), Gaps = 72/657 (10%)
Query: 49 QIHAQIILHNLFASSRITTQLISSASLHKSIDYALSIFDHFTPKNLHIFNVLIRGLAENS 108
Q+H ++ + L + ++ LI+ ++ A +FD K++ +N +I G A N
Sbjct: 215 QVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANG 274
Query: 109 HFQSCISHFVFMLRLSVRPNRLTYPFVSKSVASLSLLSLGRGLHCLIVKSGVEYDAFVRV 168
+ F M VR + ++ V K A+L L LHC +VK G +D +R
Sbjct: 275 LDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRT 334
Query: 169 HLADMYVQLGKTRGAFKVFDETPEKNKSESVLLWNVLINGCSKIGYLRKAVELFGMMPKK 228
L Y + A ++F E +V+ W +I+G + +AV+LF M +K
Sbjct: 335 ALMVAYSKCTAMLDALRLFKEI---GCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRK 391
Query: 229 NV---------------------------------ASWV--SLIDGFMRKGDLKKAGELF 253
V +S V +L+D +++ G +++A ++F
Sbjct: 392 GVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVF 451
Query: 254 EQMPEKGVVSWTAMINGFSQNGEAEKALAMFFQMLDAGVRANDFTVVSALSACAKVGA-L 312
+ +K +V+W+AM+ G++Q GE E A+ MF ++ G++ N+FT S L+ CA A +
Sbjct: 452 SGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASM 511
Query: 313 EAGVRVHNYISCNDFGLKGAIGTALVDMYAKCGNIEAASLVFGETKEKDLLTWTAMIWGL 372
G + H + + + +AL+ MYAK GNIE+A VF +EKDL++W +MI G
Sbjct: 512 GQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGY 571
Query: 373 AIHGRYEQAIQYFKKMMYSGTEPDGTVFLAILTACWYSGQVKLALNFFDSMRFDYFIEPS 432
A HG+ +A+ FK+M + DG F+ + AC ++G V+ +FD M D I P+
Sbjct: 572 AQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPT 631
Query: 433 VKHHTVVVNLLSRVGQDSQGYQNSQN----------------------------SFTKLL 464
+H++ +V+L SR GQ + + +N + K++
Sbjct: 632 KEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKII 691
Query: 465 QLKPKHPSSYVLLSNIYAAEGRWKDVARVRTLMQRRSIKKDPGWSYIEVNGHVHRFEAG- 523
+KP+ ++YVLLSN+YA G W++ A+VR LM R++KK+PG+S+IEV + F AG
Sbjct: 692 AMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGD 751
Query: 524 -GHKLAKEIHSKLEDIMAGAREQGYMPGTEWVLHNIKEE-KEEALGCHSEKLALAFGLIQ 581
H L +I+ KLED+ ++ GY P T +VL +I +E KE L HSE+LA+AFGLI
Sbjct: 752 RSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIA 811
Query: 582 TTPGTTIKIVKKLTICGDCHSLMKYASKISQREIVLRDT-RFHYF-KDGTCSCRDYW 636
T G+ + I+K L +CGDCH ++K +KI +REIV+RD+ RFH+F DG CSC D+W
Sbjct: 812 TPKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868
Score = 155 bits (393), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 149/542 (27%), Positives = 242/542 (44%), Gaps = 82/542 (15%)
Query: 48 RQIHAQIILHNLFASSRITTQLISSASLHKSIDYALSIFDHFTPKNLHIFNVLIRGLAEN 107
RQ+H Q I + T L+ + + +FD +N+ + LI G A N
Sbjct: 113 RQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARN 172
Query: 108 SHFQSCISHFVFMLRLSVRPNRLTYPFVSKSVASLSLLSL----GRGL--HCLIVKSGVE 161
S ++ F+ M +PN T+ A+L +L+ GRGL H ++VK+G++
Sbjct: 173 SMNDEVLTLFMRMQNEGTQPNSFTF------AAALGVLAEEGVGGRGLQVHTVVVKNGLD 226
Query: 162 YDAFVRVHLADMYVQLGKTRGAFKVFDETPEKNKSESVLLWNVLINGCSKIGYLRKAVEL 221
V L ++Y++ G R A +FD+T K SV+ WN +I+G + G +A+ +
Sbjct: 227 KTIPVSNSLINLYLKCGNVRKARILFDKTEVK----SVVTWNSMISGYAANGLDLEALGM 282
Query: 222 FGMMPKKNV----ASWVSLID---------------------GFMRKGDLK--------- 247
F M V +S+ S+I GF+ +++
Sbjct: 283 FYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSK 342
Query: 248 -----KAGELFEQMPEKG-VVSWTAMINGFSQNGEAEKALAMFFQMLDAGVRANDFTVVS 301
A LF+++ G VVSWTAMI+GF QN E+A+ +F +M GVR N+FT
Sbjct: 343 CTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSV 402
Query: 302 ALSACAKVGALEAGVRVHNYISCNDFGLKGAIGTALVDMYAKCGNIEAASLVFGETKEKD 361
L+A + E VH + ++ +GTAL+D Y K G +E A+ VF +KD
Sbjct: 403 ILTALPVISPSE----VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKD 458
Query: 362 LLTWTAMIWGLAIHGRYEQAIQYFKKMMYSGTEPDGTVFLAILTACWYS----GQVKLAL 417
++ W+AM+ G A G E AI+ F ++ G +P+ F +IL C + GQ K
Sbjct: 459 IVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFH 518
Query: 418 NFFDSMRFDYFIEPSVKHHTVVVNLLSRVGQDSQGYQNSQNSFTKLLQLKPKHPSSYVLL 477
F R D S+ + ++ + ++ G N +++ + + K S+ +
Sbjct: 519 GFAIKSRLD----SSLCVSSALLTMYAKKG-------NIESAEEVFKRQREKDLVSWNSM 567
Query: 478 SNIYAAEGRWKDVARVRTLMQRRSIKKDPGWSYIEVNGHVHRFEAGGHKLAKEIHSKLED 537
+ YA G+ V M++R +K D G ++I V F A H E K D
Sbjct: 568 ISGYAQHGQAMKALDVFKEMKKRKVKMD-GVTFIGV------FAACTHAGLVEEGEKYFD 620
Query: 538 IM 539
IM
Sbjct: 621 IM 622
Score = 120 bits (300), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 101/377 (26%), Positives = 168/377 (44%), Gaps = 48/377 (12%)
Query: 70 ISSASLHKSIDYALSIFDHFTPKNLHIFNVLIRGLAENSHFQSCISHFVFMLRLSVRPNR 129
+SS+ L+ A ++FD ++ + L+ G + + Q F+ + RL + +
Sbjct: 38 VSSSRLYN----AHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDC 93
Query: 130 LTYPFVSKSVASLSLLSLGRGLHCLIVKSGVEYDAFVRVHLADMYVQLGKTRGAFKVFDE 189
+ V K A+L GR LHC +K G D V L D Y++ + KVFDE
Sbjct: 94 SIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDE 153
Query: 190 TPEKNKSESVLLWNVLINGCSKIGYLRKAVELF------GMMPK---------------- 227
E+N V+ W LI+G ++ + + LF G P
Sbjct: 154 MKERN----VVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGV 209
Query: 228 -----------------KNVASWVSLIDGFMRKGDLKKAGELFEQMPEKGVVSWTAMING 270
K + SLI+ +++ G+++KA LF++ K VV+W +MI+G
Sbjct: 210 GGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISG 269
Query: 271 FSQNGEAEKALAMFFQMLDAGVRANDFTVVSALSACAKVGALEAGVRVHNYISCNDFGLK 330
++ NG +AL MF+ M VR ++ + S + CA + L ++H + F
Sbjct: 270 YAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFD 329
Query: 331 GAIGTALVDMYAKCGNIEAASLVFGETK-EKDLLTWTAMIWGLAIHGRYEQAIQYFKKMM 389
I TAL+ Y+KC + A +F E ++++WTAMI G + E+A+ F +M
Sbjct: 330 QNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMK 389
Query: 390 YSGTEPDGTVFLAILTA 406
G P+ + ILTA
Sbjct: 390 RKGVRPNEFTYSVILTA 406
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 84/168 (50%), Gaps = 4/168 (2%)
Query: 239 GFMRKGDLKKAGELFEQMPEKGVVSWTAMINGFSQNGEAEKALAMFFQMLDAGVRANDFT 298
G + L A LF++ P + S+ +++ GFS++G ++A +F + G+ +
Sbjct: 36 GTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSI 95
Query: 299 VVSALSACAKVGALEAGVRVHNYISCNDFGL--KGAIGTALVDMYAKCGNIEAASLVFGE 356
S L A + G ++H C FG ++GT+LVD Y K N + VF E
Sbjct: 96 FSSVLKVSATLCDELFGRQLH--CQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDE 153
Query: 357 TKEKDLLTWTAMIWGLAIHGRYEQAIQYFKKMMYSGTEPDGTVFLAIL 404
KE++++TWT +I G A + ++ + F +M GT+P+ F A L
Sbjct: 154 MKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAAL 201
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 355 bits (910), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 211/627 (33%), Positives = 341/627 (54%), Gaps = 67/627 (10%)
Query: 69 LISSASLHKSIDYALSIFDHFTPKNLHIFNVLIRGLAENSHFQ-SCISHFVFMLRLS--- 124
++S + + +D A S+FD KN +N L+ +NS + +C+ +F R +
Sbjct: 163 MLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACM---LFKSRENWAL 219
Query: 125 VRPNRLTYPFVSK----------------SVASLSLLSLGRG-------LHCLIVKSGVE 161
V N L FV K V S + + G L +S V+
Sbjct: 220 VSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQ 279
Query: 162 YDAFVRVHLADMYVQLGKTRGAFKVFDETPEKNKSESVLLWNVLINGCSKIGYLRKAVEL 221
D F + Y+Q A ++FD+ PE+N+ + WN ++ G + + A EL
Sbjct: 280 -DVFTWTAMVSGYIQNRMVEEARELFDKMPERNE----VSWNAMLAGYVQGERMEMAKEL 334
Query: 222 FGMMPKKNVASWVSLIDGFMRKGDLKKAGELFEQMPEKGVVSWTAMINGFSQNGEAEKAL 281
F +MP +NV++W ++I G+ + G + +A LF++MP++ VSW AMI G+SQ+G + +AL
Sbjct: 335 FDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEAL 394
Query: 282 AMFFQMLDAGVRANDFTVVSALSACAKVGALEAGVRVHNYISCNDFGLKGAIGTALVDMY 341
+F QM G R N + SALS CA V ALE G ++H + + +G AL+ MY
Sbjct: 395 RLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMY 454
Query: 342 AKCGNIEAASLVFGETKEKDLLTWTAMIWGLAIHGRYEQAIQYFKKMMYSGTEPDGTVFL 401
KCG+IE A+ +F E KD+++W MI G + HG E A+++F+ M G +PD +
Sbjct: 455 CKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMV 514
Query: 402 AILTACWYSGQVKLALNFFDSMRFDYFIEPSVKHHTVVVNLLSRVG--QDSQGYQN---- 455
A+L+AC ++G V +F +M DY + P+ +H+ +V+LL R G +D+
Sbjct: 515 AVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPF 574
Query: 456 ----------------------SQNSFTKLLQLKPKHPSSYVLLSNIYAAEGRWKDVARV 493
++ + K+ ++P++ YVLLSN+YA+ GRW DV ++
Sbjct: 575 EPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKL 634
Query: 494 RTLMQRRSIKKDPGWSYIEVNGHVHRFEAGG--HKLAKEIHSKLEDIMAGAREQGYMPGT 551
R M+ + +KK PG+S+IE+ H F G H EI + LE++ ++ GY+ T
Sbjct: 635 RVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKT 694
Query: 552 EWVLHNI-KEEKEEALGCHSEKLALAFGLIQTTPGTTIKIVKKLTICGDCHSLMKYASKI 610
VLH++ +EEKE + HSE+LA+A+G+++ + G I+++K L +C DCH+ +KY ++I
Sbjct: 695 SVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARI 754
Query: 611 SQREIVLRD-TRFHYFKDGTCSCRDYW 636
+ R I+LRD RFH+FKDG+CSC DYW
Sbjct: 755 TGRLIILRDNNRFHHFKDGSCSCGDYW 781
Score = 108 bits (271), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 158/340 (46%), Gaps = 22/340 (6%)
Query: 69 LISSASLHKSIDYALSIFDHFTPKNLHIFNVLIRGLAENSHFQSCISHFVFMLRLSVRP- 127
+IS + + A +FD ++L +NV+I+G N + F M V
Sbjct: 101 MISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSW 160
Query: 128 NRLTYPFVSKSVASLSLLSLGRGLHCLIVKSGVEYDAFVRVHLADMYVQLGKTRGAFKVF 187
N + + + R + K+ V ++A L YVQ K A +F
Sbjct: 161 NTMLSGYAQNGCVDDARSVFDR----MPEKNDVSWNA-----LLSAYVQNSKMEEACMLF 211
Query: 188 DETPEKNKSESVLLWNVLINGCSKIGYLRKAVELFGMMPKKNVASWVSLIDGFMRKGDLK 247
+ ++ +++ WN L+ G K + +A + F M ++V SW ++I G+ + G +
Sbjct: 212 ----KSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKID 267
Query: 248 KAGELFEQMPEKGVVSWTAMINGFSQNGEAEKALAMFFQMLDAGVRANDFTVVSALSACA 307
+A +LF++ P + V +WTAM++G+ QN E+A +F +M + N+ + + L+
Sbjct: 268 EARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPE----RNEVSWNAMLAGYV 323
Query: 308 KVGALEAGVRVHNYISCNDFGLKGAIGTALVDMYAKCGNIEAASLVFGETKEKDLLTWTA 367
+ +E + + + C + + ++ YA+CG I A +F + ++D ++W A
Sbjct: 324 QGERMEMAKELFDVMPCRNV----STWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAA 379
Query: 368 MIWGLAIHGRYEQAIQYFKKMMYSGTEPDGTVFLAILTAC 407
MI G + G +A++ F +M G + + F + L+ C
Sbjct: 380 MIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTC 419
Score = 106 bits (264), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 163/353 (46%), Gaps = 51/353 (14%)
Query: 174 YVQLGKTRGAFKVFDETPEKNKSESVLLWNVLINGCSKIGYLRKAVELFGMMPKKNVASW 233
Y++ G+ A +VF P S + +N +I+G + G A +LF MP++++ SW
Sbjct: 74 YMRTGRCNEALRVFKRMPRW----SSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSW 129
Query: 234 VSLIDGFMRKGDLKKAGELFEQMPEKGVVSWTAMINGFSQNGEAEKALAMFFQMLDAGVR 293
+I G++R +L KA ELFE MPE+ V SW M++G++QNG + A ++F +M +
Sbjct: 130 NVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPE---- 185
Query: 294 ANDFTVVSALSACAKVGALEAG----------------------VRVHNYISCNDF---- 327
ND + + LSA + +E V+ + F
Sbjct: 186 KNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSM 245
Query: 328 GLKGAIG-TALVDMYAKCGNIEAASLVFGETKEKDLLTWTAMIWGLAIHGRYEQAIQYFK 386
++ + ++ YA+ G I+ A +F E+ +D+ TWTAM+ G + E+A + F
Sbjct: 246 NVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFD 305
Query: 387 KMMYSGTEPDGTVFLAILTACWYSGQVKLALNFFDSMRFDYFIEPSVKHHTVVVNLLSRV 446
KM E + + A+L ++++A FD M +V ++ ++
Sbjct: 306 KM----PERNEVSWNAMLAGYVQGERMEMAKELFDVMPC-----RNVSTWNTMITGYAQC 356
Query: 447 GQDSQGYQNSQNSFTKLLQLKPKHPSSYVLLSNIYAAEGRWKDVARVRTLMQR 499
G+ S+ ++N F K+ + + P S+ + Y+ G + R+ M+R
Sbjct: 357 GKISE----AKNLFDKMPK---RDPVSWAAMIAGYSQSGHSFEALRLFVQMER 402
Score = 86.7 bits (213), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 107/221 (48%), Gaps = 14/221 (6%)
Query: 202 WNVLINGCSKIGYLRKAVELFGMMPKKNVASWVSLIDGFMRKGDLKKAGELFEQMPEKGV 261
WNV I+ + G +A+ +F MP+ + S+ +I G++R G+ + A +LF++MPE+ +
Sbjct: 67 WNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDL 126
Query: 262 VSWTAMINGFSQNGEAEKALAMFFQMLDAGVRANDFTVVSALSACAKVGALEAGVRVHNY 321
VSW MI G+ +N KA +F M + V + + + LS A+ G ++ V +
Sbjct: 127 VSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWN----TMLSGYAQNGCVDDARSVFDR 182
Query: 322 I-SCNDFGLKGAIGTALVDMYAKCGNIEAASLVFGETKEKDLLTWTAMIWGLAIHGRYEQ 380
+ ND AL+ Y + +E A ++F + L++W ++ G + +
Sbjct: 183 MPEKNDVSW-----NALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVE 237
Query: 381 AIQYFKKMMYSGTEPDGTVFLAILTACWYSGQVKLALNFFD 421
A Q+F M D + I+T SG++ A FD
Sbjct: 238 ARQFFDSM----NVRDVVSWNTIITGYAQSGKIDEARQLFD 274
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 351 bits (901), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 220/686 (32%), Positives = 339/686 (49%), Gaps = 73/686 (10%)
Query: 20 KSSHKPSNNITETHIISLIHSSNSTKQLRQIHAQIILHNLFASSRITTQLISSASLHKSI 79
KS+ N+ T IS + R IH Q ++ + + + ++ +
Sbjct: 111 KSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRV 170
Query: 80 DYALSIFDHFTPKNLHIFNVLIRGLAENSHFQSCISHFVFMLRLS-VRPNRLTYPFVSKS 138
+ A +FD K+ ++N +I G +N + I F ++ S R + T + +
Sbjct: 171 EDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPA 230
Query: 139 VASLSLLSLGRGLHCLIVKSGVEYDAFVRVHLADMYVQLGKTRGAFKVFDETPEKNKSES 198
VA L L LG +H L K+G +V +Y + GK + +F E +
Sbjct: 231 VAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREF----RKPD 286
Query: 199 VLLWNVLINGCSKIGYLRKAVELF--------------------------------GMMP 226
++ +N +I+G + G ++ LF G
Sbjct: 287 IVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYCL 346
Query: 227 KKNVASWVS----LIDGFMRKGDLKKAGELFEQMPEKGVVSWTAMINGFSQNGEAEKALA 282
K N S S L + + +++ A +LF++ PEK + SW AMI+G++QNG E A++
Sbjct: 347 KSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAIS 406
Query: 283 MFFQMLDAGVRANDFTVVSALSACAKVGALEAGVRVHNYISCNDFGLKGAIGTALVDMYA 342
+F +M + N T+ LSACA++GAL G VH+ + DF + TAL+ MYA
Sbjct: 407 LFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYA 466
Query: 343 KCGNIEAASLVFGETKEKDLLTWTAMIWGLAIHGRYEQAIQYFKKMMYSGTEPDGTVFLA 402
KCG+I A +F +K+ +TW MI G +HG+ ++A+ F +M+ SG P FL
Sbjct: 467 KCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLC 526
Query: 403 ILTACWYSGQVKLALNFFDSMRFDYFIEPSVKHHTVVVNLLSRVGQDSQGYQN------- 455
+L AC ++G VK F+SM Y EPSVKH+ +V++L R G + Q
Sbjct: 527 VLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIE 586
Query: 456 ---------------------SQNSFTKLLQLKPKHPSSYVLLSNIYAAEGRWKDVARVR 494
++ KL +L P + +VLLSNI++A+ + A VR
Sbjct: 587 PGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVR 646
Query: 495 TLMQRRSIKKDPGWSYIEVNGHVHRFEAG--GHKLAKEIHSKLEDIMAGAREQGYMPGTE 552
++R + K PG++ IE+ H F +G H KEI+ KLE + RE GY P TE
Sbjct: 647 QTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETE 706
Query: 553 WVLHNIKEEKEEAL-GCHSEKLALAFGLIQTTPGTTIKIVKKLTICGDCHSLMKYASKIS 611
LH+++EE+ E + HSE+LA+AFGLI T PGT I+I+K L +C DCH++ K SKI+
Sbjct: 707 LALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKIT 766
Query: 612 QREIVLRD-TRFHYFKDGTCSCRDYW 636
+R IV+RD RFH+FKDG CSC DYW
Sbjct: 767 ERVIVVRDANRFHHFKDGVCSCGDYW 792
Score = 171 bits (432), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 125/465 (26%), Positives = 212/465 (45%), Gaps = 49/465 (10%)
Query: 29 ITETHIISLIHSSNSTKQLRQIHAQIILHNLFASSRITTQLISSASLHKSIDYALSIFDH 88
I++ + S S L Q HAQIILH + T+L S +I YA IF
Sbjct: 18 ISKNTYLDFFKRSTSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLS 77
Query: 89 FTPKNLHIFNVLIRGLAENSHFQSCISHFVFMLR-LSVRPNRLTYPFVSKSVASLSLLSL 147
++ +FNVL+RG + N S +S F + + ++PN TY F + +
Sbjct: 78 VQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRA 137
Query: 148 GRGLHCLIVKSGVEYDAFVRVHLADMYVQLGKTRGAFKVFDETPEKNKSESVLLWNVLIN 207
GR +H V G + + + ++ MY + + A KVFD PEK+ +LWN +I+
Sbjct: 138 GRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKD----TILWNTMIS 193
Query: 208 G---------------------CSKIGY---------------LRKAVELFGMMPKKNVA 231
G C+++ LR +++ + K
Sbjct: 194 GYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCY 253
Query: 232 SWVSLIDGFM----RKGDLKKAGELFEQMPEKGVVSWTAMINGFSQNGEAEKALAMFFQM 287
S ++ GF+ + G +K LF + + +V++ AMI+G++ NGE E +L++F ++
Sbjct: 254 SHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKEL 313
Query: 288 LDAGVRANDFTVVSALSACAKVGALEAGVRVHNYISCNDFGLKGAIGTALVDMYAKCGNI 347
+ +G R T+VS + + + A +H Y ++F ++ TAL +Y+K I
Sbjct: 314 MLSGARLRSSTLVSLVPVSGHLMLIYA---IHGYCLKSNFLSHASVSTALTTVYSKLNEI 370
Query: 348 EAASLVFGETKEKDLLTWTAMIWGLAIHGRYEQAIQYFKKMMYSGTEPDGTVFLAILTAC 407
E+A +F E+ EK L +W AMI G +G E AI F++M S P+ IL+AC
Sbjct: 371 ESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSAC 430
Query: 408 WYSGQVKLALNFFDSMRFDYFIEPSVKHHTVVVNLLSRVGQDSQG 452
G + L D +R F E S+ T ++ + ++ G ++
Sbjct: 431 AQLGALSLGKWVHDLVRSTDF-ESSIYVSTALIGMYAKCGSIAEA 474
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 351 bits (900), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 210/635 (33%), Positives = 324/635 (51%), Gaps = 47/635 (7%)
Query: 45 KQLRQIHAQIILHNLFASSRITTQLISSASLHKSIDYALSIFDHFTPKNLHIFNVLIRGL 104
+ LR +H++IIL +L +S + +L+ + + K + A +FD +N+ I NV+IR
Sbjct: 56 RTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSY 115
Query: 105 AENSHFQSCISHFVFMLRLSVRPNRLTYPFVSKSVASLSLLSLGRGLHCLIVKSGVEYDA 164
N + + F M +VRP+ T+P V K+ + + +GR +H K G+
Sbjct: 116 VNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTL 175
Query: 165 FVRVHLADMYVQLGKTRGAFKVFDETPEKNKSESVLLWNVLINGCSKIGYLRKAVELFGM 224
FV L MY + G A V DE ++ V+ WN L+ G ++ A+E+
Sbjct: 176 FVGNGLVSMYGKCGFLSEARLVLDEMSRRD----VVSWNSLVVGYAQNQRFDDALEVCRE 231
Query: 225 MPKKNVA----SWVSLIDGFMRKG--DLKKAGELFEQMPEKGVVSWTAMINGFSQNGEAE 278
M ++ + SL+ ++ ++F +M +K +VSW MI + +N
Sbjct: 232 MESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPV 291
Query: 279 KALAMFFQMLDAGVRANDFTVVSALSACAKVGALEAGVRVHNYISCNDFGLKGAIGTALV 338
+A+ ++ +M G + ++ S L AC AL G ++H YI + AL+
Sbjct: 292 EAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALI 351
Query: 339 DMYAKCGNIEAASLVFGETKEKDLLTWTAMIWGLAIHGRYEQAIQYFKKMMYSGTEPDGT 398
DMYAKCG +E A VF K +D+++WTAMI GR A+ F K+ SG PD
Sbjct: 352 DMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSI 411
Query: 399 VFLAILTACWYSGQVKLALNFFDSMRFDYFIEPSVKHHTVVVNLLSRVGQDSQGYQNSQN 458
F+ L AC ++G ++ + F M Y I P ++H +V+LL R G+ + Y+ Q+
Sbjct: 412 AFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQD 471
Query: 459 ----------------------------SFTKLLQLKPKHPSSYVLLSNIYAAEGRWKDV 490
+ KL QL P+ YVLLSNIYA GRW++V
Sbjct: 472 MSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEV 531
Query: 491 ARVRTLMQRRSIKKDPGWSYIEVNGHVHRFEAG--GHKLAKEIHSKLEDIMAGAREQGYM 548
+R +M+ + +KK+PG S +EVN +H F G H + EI+ +L+ ++ +E GY+
Sbjct: 532 TNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYV 591
Query: 549 PGTEWVLHNIKEE-KEEALGCHSEKLALAFGLIQT-----TPGTTIKIVKKLTICGDCHS 602
P +E LH+++EE KE L HSEKLA+ F L+ T TI+I K L ICGDCH
Sbjct: 592 PDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRITKNLRICGDCHV 651
Query: 603 LMKYASKISQREIVLRDT-RFHYFKDGTCSCRDYW 636
K S+I+ REI++RDT RFH F+ G CSC DYW
Sbjct: 652 AAKLISQITSREIIIRDTNRFHVFRFGVCSCGDYW 686
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 350 bits (899), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 212/674 (31%), Positives = 343/674 (50%), Gaps = 90/674 (13%)
Query: 48 RQIHAQIILHNLFASSRITTQLISSASLHKSIDYALSIFDHFTPKNLHIFNVLIRGLAEN 107
+Q+HA + S I T + L K + + + F ++L +N ++ L +N
Sbjct: 222 KQVHAYGLRKGELNSFIINTLVAMYGKLGK-LASSKVLLGSFGGRDLVTWNTVLSSLCQN 280
Query: 108 SHFQSCISHFVFMLRLSVRPNRLTYPFVSKSVASLSLLSLGRGLHCLIVKSG-VEYDAFV 166
+ + M+ V P+ T V + + L +L G+ LH +K+G ++ ++FV
Sbjct: 281 EQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFV 340
Query: 167 RVHLADMYVQLGKTRGAFKVFDETPEKNKSESVLLWNVLINGCSKIGYLRKAVELF---- 222
L DMY + +VFD ++ + LWN +I G S+ + ++A+ LF
Sbjct: 341 GSALVDMYCNCKQVLSGRRVFDGMFDRK----IGLWNAMIAGYSQNEHDKEALLLFIGME 396
Query: 223 -------------GMMP----------KKNVASWV-------------SLIDGFMRKGDL 246
G++P K+ + +V +L+D + R G +
Sbjct: 397 ESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKI 456
Query: 247 KKAGELFEQMPEKGVVSWTAMINGFSQNGEAEKALAMFFQMLD-----------AGVRAN 295
A +F +M ++ +V+W MI G+ + E AL + +M + ++ N
Sbjct: 457 DIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPN 516
Query: 296 DFTVVSALSACAKVGALEAGVRVHNYISCNDFGLKGAIGTALVDMYAKCGNIEAASLVFG 355
T+++ L +CA + AL G +H Y N+ A+G+ALVDMYAKCG ++ + VF
Sbjct: 517 SITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFD 576
Query: 356 ETKEKDLLTWTAMIWGLAIHGRYEQAIQYFKKMMYSGTEPDGTVFLAILTACWYSGQVKL 415
+ +K+++TW +I +HG ++AI + MM G +P+ F+++ AC +SG V
Sbjct: 577 QIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDE 636
Query: 416 ALNFFDSMRFDYFIEPSVKHHTVVVNLLSRVGQDSQGYQ---------NSQNSFTKLL-- 464
L F M+ DY +EPS H+ VV+LL R G+ + YQ N +++ LL
Sbjct: 637 GLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGA 696
Query: 465 ------------------QLKPKHPSSYVLLSNIYAAEGRWKDVARVRTLMQRRSIKKDP 506
QL+P S YVLL+NIY++ G W VR M+ + ++K+P
Sbjct: 697 SRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEP 756
Query: 507 GWSYIEVNGHVHRFEAG--GHKLAKEIHSKLEDIMAGAREQGYMPGTEWVLHNIKEEKEE 564
G S+IE VH+F AG H ++++ LE + R++GY+P T VLHN++E+++E
Sbjct: 757 GCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKE 816
Query: 565 ALGC-HSEKLALAFGLIQTTPGTTIKIVKKLTICGDCHSLMKYASKISQREIVLRDT-RF 622
L C HSEKLA+AFG++ T+PGT I++ K L +C DCH K+ SKI REI+LRD RF
Sbjct: 817 ILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRF 876
Query: 623 HYFKDGTCSCRDYW 636
H FK+GTCSC DYW
Sbjct: 877 HRFKNGTCSCGDYW 890
Score = 112 bits (280), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 156/356 (43%), Gaps = 48/356 (13%)
Query: 100 LIRGLAENSHFQSCISHFVFMLRLSVRPNRLTYPFVSKSVASLSLLSLGRGLHCLIVKSG 159
L+R ++ + + +V M+ L ++P+ +P + K+VA L + LG+ +H + K G
Sbjct: 68 LLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFG 127
Query: 160 VEYDAFVRVH-LADMYVQLGKTRGAFKVFDETPEKNKSESVLLWNVLINGCSKIGYLRKA 218
D+ + L ++Y + G +KVFD E+N+ + WN LI+ A
Sbjct: 128 YGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQ----VSWNSLISSLCSFEKWEMA 183
Query: 219 VELFGMMPKKNV-------------ASWVSLIDGFM----------RKGDLK-------- 247
+E F M +NV S + + +G M RKG+L
Sbjct: 184 LEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLV 243
Query: 248 ----KAGE------LFEQMPEKGVVSWTAMINGFSQNGEAEKALAMFFQMLDAGVRANDF 297
K G+ L + +V+W +++ QN + +AL +M+ GV ++F
Sbjct: 244 AMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEF 303
Query: 298 TVVSALSACAKVGALEAGVRVHNYISCN-DFGLKGAIGTALVDMYAKCGNIEAASLVFGE 356
T+ S L AC+ + L G +H Y N +G+ALVDMY C + + VF
Sbjct: 304 TISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDG 363
Query: 357 TKEKDLLTWTAMIWGLAIHGRYEQAIQYFKKMMYS-GTEPDGTVFLAILTACWYSG 411
++ + W AMI G + + ++A+ F M S G + T ++ AC SG
Sbjct: 364 MFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSG 419
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 75/145 (51%), Gaps = 1/145 (0%)
Query: 264 WTAMINGFSQNGEAEKALAMFFQMLDAGVRANDFTVVSALSACAKVGALEAGVRVHNYIS 323
W ++ ++ +A+ + M+ G++ +++ + L A A + +E G ++H ++
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 324 CNDFGLKGA-IGTALVDMYAKCGNIEAASLVFGETKEKDLLTWTAMIWGLAIHGRYEQAI 382
+G+ + LV++Y KCG+ A VF E++ ++W ++I L ++E A+
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 383 QYFKKMMYSGTEPDGTVFLAILTAC 407
+ F+ M+ EP ++++TAC
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTAC 209
Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 114/247 (46%), Gaps = 9/247 (3%)
Query: 20 KSSHKPSNNITETHIISLIHSSNSTKQLRQIHAQIILHNLFASSRITTQLISSASLHKSI 79
+ S KP N+IT I+ + ++ + ++IHA I +NL + + L+ + +
Sbjct: 510 RVSLKP-NSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCL 568
Query: 80 DYALSIFDHFTPKNLHIFNVLIRGLAENSHFQSCISHFVFMLRLSVRPNRLTYPFVSKSV 139
+ +FD KN+ +NV+I + + Q I M+ V+PN +T+ V +
Sbjct: 569 QMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAAC 628
Query: 140 ASLSLLSLG-RGLHCLIVKSGVEYDAFVRVHLADMYVQLGKTRGAFKVFDETPE---KNK 195
+ ++ G R + + GVE + + D+ + G+ + A+++ + P K
Sbjct: 629 SHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAG 688
Query: 196 SESVLLWNVLINGCSKIGYLRKAVELFGMMPKKNVAS-WVSLIDGFMRKGDLKKAGELFE 254
+ S LL I+ +IG + A L + P NVAS +V L + + G KA E+
Sbjct: 689 AWSSLLGASRIHNNLEIGEI-AAQNLIQLEP--NVASHYVLLANIYSSAGLWDKATEVRR 745
Query: 255 QMPEKGV 261
M E+GV
Sbjct: 746 NMKEQGV 752
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 348 bits (894), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 219/674 (32%), Positives = 347/674 (51%), Gaps = 82/674 (12%)
Query: 41 SNSTKQLRQIHAQIILHNLFASS------RITTQLISSASLHKSIDYALSIFDHFTPKNL 94
S S LR +H LH S + L++ ++ +D A +FD T +++
Sbjct: 202 SKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDV 261
Query: 95 HIFNVLIRGLAENSHFQSCISHFVFMLRLSVRPNRLTYPFVSKSVASLSLLSLGRGLHCL 154
+N +I G N + +S FV ML + + T V A L+SLGR +H +
Sbjct: 262 ISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSI 321
Query: 155 IVKSGVEYDAFVRVHLADMYVQLGKTRGAFKVFDETPEKNKSESVLLWNVLINGCSKIGY 214
VK+ + L DMY + G A VF E ++ SV+ + +I G ++ G
Sbjct: 322 GVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDR----SVVSYTSMIAGYAREGL 377
Query: 215 LRKAVELF------GMMPK--------------------KNVASWV-------------S 235
+AV+LF G+ P K V W+ +
Sbjct: 378 AGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNA 437
Query: 236 LIDGFMRKGDLKKAGELFEQMPEKGVVSWTAMINGFSQNGEAEKALAMFFQMLDAG-VRA 294
L+D + + G +++A +F +M K ++SW +I G+S+N A +AL++F +L+
Sbjct: 438 LMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSP 497
Query: 295 NDFTVVSALSACAKVGALEAGVRVHNYISCNDFGLKGAIGTALVDMYAKCGNIEAASLVF 354
++ TV L ACA + A + G +H YI N + + +LVDMYAKCG + A ++F
Sbjct: 498 DERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLF 557
Query: 355 GETKEKDLLTWTAMIWGLAIHGRYEQAIQYFKKMMYSGTEPDGTVFLAILTACWYSGQVK 414
+ KDL++WT MI G +HG ++AI F +M +G E D F+++L AC +SG V
Sbjct: 558 DDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVD 617
Query: 415 LALNFFDSMRFDYFIEPSVKHHTVVVNLLSRVGQDSQGYQNSQNS--------------- 459
FF+ MR + IEP+V+H+ +V++L+R G + Y+ +N
Sbjct: 618 EGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCG 677
Query: 460 -------------FTKLLQLKPKHPSSYVLLSNIYAAEGRWKDVARVRTLMQRRSIKKDP 506
K+ +L+P++ YVL++NIYA +W+ V R+R + +R ++K+P
Sbjct: 678 CRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNP 737
Query: 507 GWSYIEVNGHVHRFEAG--GHKLAKEIHSKLEDIMAGAREQGYMPGTEWVLHNIKE-EKE 563
G S+IE+ G V+ F AG + + I + L + A E+GY P T++ L + +E EKE
Sbjct: 738 GCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKE 797
Query: 564 EALGCHSEKLALAFGLIQTTPGTTIKIVKKLTICGDCHSLMKYASKISQREIVLRDT-RF 622
EAL HSEKLA+A G+I + G I++ K L +CGDCH + K+ SK+++REIVLRD+ RF
Sbjct: 798 EALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRF 857
Query: 623 HYFKDGTCSCRDYW 636
H FKDG CSCR +W
Sbjct: 858 HQFKDGHCSCRGFW 871
Score = 167 bits (423), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 128/466 (27%), Positives = 216/466 (46%), Gaps = 61/466 (13%)
Query: 30 TETHIISLIHSSNSTKQLRQIHAQIILHNLFASSRITTQLISSASLHKSIDYALSIFDHF 89
T ++ L S S K +++ I + S + ++L + + A +FD
Sbjct: 96 TLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEV 155
Query: 90 TPKNLHIFNVLIRGLAENSHFQSCISHFVFMLRLSVRPNRLTYPFVSKSVASLSLLSLGR 149
+ +N+L+ LA++ F I F M+ V + T+ VSKS +SL + G
Sbjct: 156 KIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGE 215
Query: 150 GLHCLIVKSGVEYDAFVRVHLADMYVQLGKTRGAFKVFDETPEKNKSESVLLWNVLINGC 209
LH I+KSG V L Y++ + A KVFDE E++ V+ WN +ING
Sbjct: 216 QLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERD----VISWNSIINGY 271
Query: 210 SKIGYLRKAVELFGMM----PKKNVASWVS------------------------------ 235
G K + +F M + ++A+ VS
Sbjct: 272 VSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRED 331
Query: 236 -----LIDGFMRKGDLKKAGELFEQMPEKGVVSWTAMINGFSQNGEAEKALAMFFQMLDA 290
L+D + + GDL A +F +M ++ VVS+T+MI G+++ G A +A+ +F +M +
Sbjct: 332 RFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEE 391
Query: 291 GVRANDFTVVSALSACAKVGALEAGVRVHNYISCNDFGLKGAIGTALVDMYAKCGNIEAA 350
G+ + +TV + L+ CA+ L+ G RVH +I ND G + AL+DMYAKCG+++ A
Sbjct: 392 GISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEA 451
Query: 351 SLVFGETKEKDLLTWTAMIWGLAIHGRYEQAIQYFKKMMYSGT-EPDGTVFLAILTACWY 409
LVF E + KD+++W +I G + + +A+ F ++ PD +L AC
Sbjct: 452 ELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPAC-- 509
Query: 410 SGQVKLALNFFDS--------MRFDYFIEPSVKHHTVVVNLLSRVG 447
+L+ FD MR YF + V + +V++ ++ G
Sbjct: 510 -----ASLSAFDKGREIHGYIMRNGYFSDRHVANS--LVDMYAKCG 548
Score = 73.9 bits (180), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 70/146 (47%), Gaps = 2/146 (1%)
Query: 258 EKGVVSWTAMINGFSQNGEAEKALAMFFQMLDAGVRANDFTVVSALSACAKVGALEAGVR 317
++ V + F ++G E A+ + + + T+ S L CA +L+ G
Sbjct: 58 DRSVTDANTQLRRFCESGNLENAVKLL--CVSGKWDIDPRTLCSVLQLCADSKSLKDGKE 115
Query: 318 VHNYISCNDFGLKGAIGTALVDMYAKCGNIEAASLVFGETKEKDLLTWTAMIWGLAIHGR 377
V N+I N F + +G+ L MY CG+++ AS VF E K + L W ++ LA G
Sbjct: 116 VDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGD 175
Query: 378 YEQAIQYFKKMMYSGTEPDGTVFLAI 403
+ +I FKKMM SG E D F +
Sbjct: 176 FSGSIGLFKKMMSSGVEMDSYTFSCV 201
>sp|Q9FJY7|PP449_ARATH Pentatricopeptide repeat-containing protein At5g66520
OS=Arabidopsis thaliana GN=PCMP-H61 PE=2 SV=1
Length = 620
Score = 347 bits (891), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 214/654 (32%), Positives = 335/654 (51%), Gaps = 73/654 (11%)
Query: 19 IKSSHKPSNNITETHIISLIHSSNSTKQLRQIHAQIILHNLFASSRITTQLIS---SASL 75
I S +N+ ET +S + + ++L+QIHA+++ L S T+ +S S++
Sbjct: 4 ISCSFSLEHNLYET--MSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTS 61
Query: 76 HKSIDYALSIFDHFTPKNLHIFNVLIRGLAENSHFQSCISHFVFMLRLSVRPNRLTYPFV 135
+ YA +FD F + ++N++IRG + + + + + ML S N T+P +
Sbjct: 62 SDFLPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSL 121
Query: 136 SKSVASLSLLSLGRGLHCLIVKSGVEYDAFVRVHLADMYVQLGKTRGAFKVFDETPEKNK 195
K+ ++LS +H I K G E D + L + Y G + A +FD PE +
Sbjct: 122 LKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDD 181
Query: 196 SESVLLWNVLINGCSKIGYLRKAVELFGMMPKKNVASWVSLIDGFMRKGDLKKAGELFEQ 255
+ WN +I G K G + A+ LF M +KN SW ++I G++ + D+ K
Sbjct: 182 ----VSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYV-QADMNK------- 229
Query: 256 MPEKGVVSWTAMINGFSQNGEAEKALAMFFQMLDAGVRANDFTVVSALSACAKVGALEAG 315
+AL +F +M ++ V ++ ++ +ALSACA++GALE G
Sbjct: 230 -----------------------EALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQG 266
Query: 316 VRVHNYISCNDFGLKGAIGTALVDMYAKCGNIEAASLVFGETKEKDLLTWTAMIWGLAIH 375
+H+Y++ + +G L+DMYAKCG +E A VF K+K + WTA+I G A H
Sbjct: 267 KWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYH 326
Query: 376 GRYEQAIQYFKKMMYSGTEPDGTVFLAILTACWYSGQVKLALNFFDSMRFDYFIEPSVKH 435
G +AI F +M G +P+ F A+LTAC Y+G V+ F SM DY ++P+++H
Sbjct: 327 GHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEH 386
Query: 436 HTVVVNLLSRVGQDSQGYQNSQNSFTK----------------------------LLQLK 467
+ +V+LL R G + + Q K L+ +
Sbjct: 387 YGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAID 446
Query: 468 PKHPSSYVLLSNIYAAEGRWKDVARVRTLMQRRSIKKDPGWSYIEVNGHVHRFEAG--GH 525
P H YV +NI+A + +W A R LM+ + + K PG S I + G H F AG H
Sbjct: 447 PYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDRSH 506
Query: 526 KLAKEIHSKLEDIMAGAREQGYMPGTEWVLHNI--KEEKEEALGCHSEKLALAFGLIQTT 583
++I SK + E GY+P E +L ++ +E+E + HSEKLA+ +GLI+T
Sbjct: 507 PEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVHQHSEKLAITYGLIKTK 566
Query: 584 PGTTIKIVKKLTICGDCHSLMKYASKISQREIVLRD-TRFHYFKDGTCSCRDYW 636
PGT I+I+K L +C DCH + K SKI +R+IV+RD TRFH+F+DG CSC DYW
Sbjct: 567 PGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCSCGDYW 620
>sp|Q9FND7|PP410_ARATH Putative pentatricopeptide repeat-containing protein At5g40405
OS=Arabidopsis thaliana GN=PCMP-H14 PE=3 SV=1
Length = 612
Score = 347 bits (890), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 210/643 (32%), Positives = 330/643 (51%), Gaps = 81/643 (12%)
Query: 35 ISLIHSSNSTKQLRQIHAQIILHNLFASSRITTQLISSASL--HKSIDYALSIFDHFTPK 92
I+L+ S + K++RQIHA++ + + + + +L HK +DYA I D
Sbjct: 10 IALLDSGITFKEVRQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQILDRSEKP 69
Query: 93 NLHIFNVLIRGLAENSHFQSCISH--FVFMLRL-----SVRPNRLTYPFVSKSVASLSLL 145
L N +IR +H +S + F F R+ ++P+ T F+ ++ L +
Sbjct: 70 TLFALNSMIR-----AHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMR 124
Query: 146 SLGRGLHCLIVKSGVEYDAFVRVHLADMYVQLGKTRGAFKVFDETPEKNKSESVLLWNVL 205
G +H + ++ G + D V+ L +Y +LG
Sbjct: 125 ETGLQVHGMTIRRGFDNDPHVQTGLISLYAELG--------------------------C 158
Query: 206 INGCSKIGYLRKAVELFGMMPKKNVASWVSLIDGFMRKGDLKKAGELFEQMPEKGVVSWT 265
++ C K+ F +P + +++ R GD+ A +LFE MPE+ ++W
Sbjct: 159 LDSCHKV---------FNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWN 209
Query: 266 AMINGFSQNGEAEKALAMFFQMLDAGVRANDFTVVSALSACAKVGALEAGVRVHNYISCN 325
AMI+G++Q GE+ +AL +F M GV+ N ++S LSAC ++GAL+ G H+YI N
Sbjct: 210 AMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERN 269
Query: 326 DFGLKGAIGTALVDMYAKCGNIEAASLVFGETKEKDLLTWTAMIWGLAIHGRYEQAIQYF 385
+ + T LVD+YAKCG++E A VF +EK++ TW++ + GLA++G E+ ++ F
Sbjct: 270 KIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELF 329
Query: 386 KKMMYSGTEPDGTVFLAILTACWYSGQVKLALNFFDSMRFDYFIEPSVKHHTVVVNLLSR 445
M G P+ F+++L C G V FDSMR ++ IEP ++H+ +V+L +R
Sbjct: 330 SLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYAR 389
Query: 446 VGQ-------------------------DSQGYQNSQNSF---TKLLQLKPKHPSSYVLL 477
G+ S+ Y+N + K+L+L+ + +YVLL
Sbjct: 390 AGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELGVLASKKMLELETANHGAYVLL 449
Query: 478 SNIYAAEGRWKDVARVRTLMQRRSIKKDPGWSYIEVNGHVHRFEAG--GHKLAKEIHSKL 535
SNIYA W +V+ VR M+ + ++K PG S +EVNG VH F G H +I +
Sbjct: 450 SNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVMEVNGEVHEFFVGDKSHPKYTQIDAVW 509
Query: 536 EDIMAGAREQGYMPGTEWVLHNI-KEEKEEALGCHSEKLALAFGLIQTTPGTTIKIVKKL 594
+DI R GY T V+ +I +EEKE+AL HSEK A+AFG++ I+IVK L
Sbjct: 510 KDISRRLRLAGYKADTTPVMFDIDEEEKEDALCLHSEKAAIAFGIMSLKEDVPIRIVKNL 569
Query: 595 TICGDCHSLMKYASKISQREIVLRD-TRFHYFKDGTCSCRDYW 636
+CGDCH + SKI REI++RD RFH+FKDG CSC +W
Sbjct: 570 RVCGDCHQVSMMISKIFNREIIVRDRNRFHHFKDGHCSCNGFW 612
Score = 52.8 bits (125), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/243 (20%), Positives = 102/243 (41%), Gaps = 15/243 (6%)
Query: 27 NNITETHIISLIHSSNSTKQLRQIHAQIILHNLFASSRITTQLISSASLHKSIDYALSIF 86
N + ++S + Q R H+ I + + + R+ T L+ + ++ A+ +F
Sbjct: 239 NGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVF 298
Query: 87 DHFTPKNLHIFNVLIRGLAENSHFQSCISHFVFMLRLSVRPNRLTYPFVSKSVASLSLLS 146
KN++ ++ + GLA N + C+ F M + V PN +T+ V + + + +
Sbjct: 299 WGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVD 358
Query: 147 LG-RGLHCLIVKSGVEYDAFVRVHLADMYVQLGKTRGAFKVFDETPEKNKSESVLLWNVL 205
G R + + G+E L D+Y + G+ A + + P K + +W+ L
Sbjct: 359 EGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAA---VWSSL 415
Query: 206 INGCSKIGYLRKAVELFGMMPKK-------NVASWVSLIDGFMRKGDLKKAGELFEQMPE 258
++ + K +EL + KK N ++V L + + D + + M
Sbjct: 416 LHA----SRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKS 471
Query: 259 KGV 261
KGV
Sbjct: 472 KGV 474
>sp|Q9M4P3|PP316_ARATH Pentatricopeptide repeat-containing protein At4g16835,
mitochondrial OS=Arabidopsis thaliana GN=DYW10 PE=2 SV=3
Length = 656
Score = 344 bits (883), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 200/544 (36%), Positives = 299/544 (54%), Gaps = 76/544 (13%)
Query: 161 EYDAFVRVHLADMYVQLGKTRGAFKVFDETPEKNKSESVLLWNVLINGCSKIGYLRKAVE 220
E D F + YV+ A FD P K+ + WN +I G ++ G + KA E
Sbjct: 121 EPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAAS----WNTMITGYARRGEMEKARE 176
Query: 221 LFGMMPKKNVASWVSLIDGFMRKGDLKKAGELFEQMPEKGVVSWTAMI------------ 268
LF M +KN SW ++I G++ GDL+KA F+ P +GVV+WTAMI
Sbjct: 177 LFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELA 236
Query: 269 --------------------NGFSQNGEAEKALAMFFQMLDAGVRANDFTVVSALSACAK 308
+G+ +N E L +F ML+ G+R N + SAL C++
Sbjct: 237 EAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSE 296
Query: 309 VGALEAGVRVHNYIS----CNDFGLKGAIGTALVDMYAKCGNIEAASLVFGETKEKDLLT 364
+ AL+ G ++H +S CND T+L+ MY KCG + A +F K+KD++
Sbjct: 297 LSALQLGRQIHQIVSKSTLCNDV----TALTSLISMYCKCGELGDAWKLFEVMKKKDVVA 352
Query: 365 WTAMIWGLAIHGRYEQAIQYFKKMMYSGTEPDGTVFLAILTACWYSGQVKLALNFFDSMR 424
W AMI G A HG ++A+ F++M+ + PD F+A+L AC ++G V + + +F+SM
Sbjct: 353 WNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMV 412
Query: 425 FDYFIEPSVKHHTVVVNLLSRVGQDSQG-------------------------YQN---S 456
DY +EP H+T +V+LL R G+ + ++N +
Sbjct: 413 RDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELA 472
Query: 457 QNSFTKLLQLKPKHPSSYVLLSNIYAAEGRWKDVARVRTLMQRRSIKKDPGWSYIEVNGH 516
+ + KLLQL ++ + YV L+NIYA++ RW+DVARVR M+ ++ K PG+S+IE+
Sbjct: 473 EFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNK 532
Query: 517 VHRFEAGG--HKLAKEIHSKLEDIMAGAREQGYMPGTEWVLHNIKEE-KEEALGCHSEKL 573
VH F + H IH KL+++ + GY P E+ LHN++EE KE+ L HSEKL
Sbjct: 533 VHHFRSSDRIHPELDSIHKKLKELEKKMKLAGYKPELEFALHNVEEEQKEKLLLWHSEKL 592
Query: 574 ALAFGLIQTTPGTTIKIVKKLTICGDCHSLMKYASKISQREIVLRD-TRFHYFKDGTCSC 632
A+AFG I+ G+ I++ K L ICGDCH +K+ S+I +REI++RD TRFH+FKDG+CSC
Sbjct: 593 AVAFGCIKLPQGSQIQVFKNLRICGDCHKAIKFISEIEKREIIVRDTTRFHHFKDGSCSC 652
Query: 633 RDYW 636
DYW
Sbjct: 653 GDYW 656
Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 117/236 (49%), Gaps = 16/236 (6%)
Query: 175 VQLGKTRGAFKVFDETPEKNKSESVLLWNVLINGCSK-IGYLRKAVELFGMMPKKNVASW 233
V+ G GA +VF KN + WN L+ G SK + +A +LF +P+ + S+
Sbjct: 72 VRSGDIDGALRVFHGMRAKN----TITWNSLLIGISKDPSRMMEAHQLFDEIPEPDTFSY 127
Query: 234 VSLIDGFMRKGDLKKAGELFEQMPEKGVVSWTAMINGFSQNGEAEKALAMFFQMLDAGVR 293
++ ++R + +KA F++MP K SW MI G+++ GE EKA +F+ M++
Sbjct: 128 NIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMME---- 183
Query: 294 ANDFTVVSALSACAKVGALEAGVRVHNYISCNDFGLKGAIG-TALVDMYAKCGNIEAASL 352
N+ + + +S + G LE ++G + TA++ Y K +E A
Sbjct: 184 KNEVSWNAMISGYIECGDLEKASHFFKVAP-----VRGVVAWTAMITGYMKAKKVELAEA 238
Query: 353 VFGE-TKEKDLLTWTAMIWGLAIHGRYEQAIQYFKKMMYSGTEPDGTVFLAILTAC 407
+F + T K+L+TW AMI G + R E ++ F+ M+ G P+ + + L C
Sbjct: 239 MFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGC 294
Score = 80.1 bits (196), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 136/323 (42%), Gaps = 36/323 (11%)
Query: 67 TQLISSASLHKSIDYALSIFDHFT-PKNLHIFNVLIRGLAENSHFQSCISHFVFMLRLSV 125
T +I+ K ++ A ++F T KNL +N +I G ENS + + F ML +
Sbjct: 221 TAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGI 280
Query: 126 RPNRLTYPFVSKSVASLSLLSLGRGLHCLIVKSGVEYDAFVRVHLADMYVQLGKTRGAFK 185
RPN + LS L LGR +H ++ KS + D L MY + G+ A+K
Sbjct: 281 RPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWK 340
Query: 186 VFDETPEKNKSESVLLWNVLINGCSKIGYLRKAVELF-GMMPKKNVASWVSLIDGFM--- 241
+F E K + V+ WN +I+G ++ G KA+ LF M+ K W++ + +
Sbjct: 341 LF----EVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACN 396
Query: 242 RKGDLKKAGELFEQMPEKGVVS-----WTAMINGFSQNGEAEKALAMFFQMLDAGVRAND 296
G + FE M V +T M++ + G+ E+AL + +R+
Sbjct: 397 HAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKL--------IRSMP 448
Query: 297 FTVVSALSACAKVGALEAGVRVHNYISCNDFGL--------KGAIG-TALVDMYAKCGNI 347
F +A+ G L RVH + +F + A G L ++YA
Sbjct: 449 FRPHAAV-----FGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRW 503
Query: 348 EAASLVFGETKEKDLLTWTAMIW 370
E + V KE +++ W
Sbjct: 504 EDVARVRKRMKESNVVKVPGYSW 526
Score = 43.1 bits (100), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/231 (20%), Positives = 91/231 (39%), Gaps = 12/231 (5%)
Query: 48 RQIHAQIILHNLFASSRITTQLISSASLHKSIDYALSIFDHFTPKNLHIFNVLIRGLAEN 107
RQIH + L T LIS + A +F+ K++ +N +I G A++
Sbjct: 304 RQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQH 363
Query: 108 SHFQSCISHFVFMLRLSVRPNRLTYPFVSKSVASLSLLSLGRG-LHCLIVKSGVEYDAFV 166
+ + F M+ +RP+ +T+ V + L+++G ++ VE
Sbjct: 364 GNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDH 423
Query: 167 RVHLADMYVQLGKTRGAFKVFDETPEKNKSESVLLWNVLINGC---SKIGYLRKAVELFG 223
+ D+ + GK A K+ P + + ++ L+ C + A E
Sbjct: 424 YTCMVDLLGRAGKLEEALKLIRSMPFRPHAA---VFGTLLGACRVHKNVELAEFAAEKLL 480
Query: 224 MMPKKNVASWVSLIDGFMRKGDLKKAGELFEQMPEKGVV-----SWTAMIN 269
+ +N A +V L + + K + + ++M E VV SW + N
Sbjct: 481 QLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRN 531
>sp|Q0WSH6|PP312_ARATH Pentatricopeptide repeat-containing protein At4g14850
OS=Arabidopsis thaliana GN=LOI1 PE=1 SV=1
Length = 684
Score = 344 bits (883), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 228/676 (33%), Positives = 340/676 (50%), Gaps = 88/676 (13%)
Query: 40 SSNSTKQLRQIHAQII-LHNLFASSRITTQLISSASLHKSIDYALS--IFDHFTP-KNLH 95
S++S + R +HA+I+ + + LI+ ++ +D+ S + TP +N+
Sbjct: 18 SASSMRLGRVVHARIVKTLDSPPPPFLANYLIN---MYSKLDHPESARLVLRLTPARNVV 74
Query: 96 IFNVLIRGLAENSHFQSCISHFVFMLRLSVRPNRLTYPFVSKSVASLSLLSLGRGLHCLI 155
+ LI GLA+N HF + + F M R V PN T+P K+VASL L G+ +H L
Sbjct: 75 SWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALA 134
Query: 156 VKSGVEYDAFVRVHLADMYVQLGKTRGAFKVFDETPEKNKSESVLLWNVLI--------- 206
VK G D FV DMY + A K+FDE PE+N + WN I
Sbjct: 135 VKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERN----LETWNAFISNSVTDGRP 190
Query: 207 --------------------------NGCSKIGYLRKAVELFGMMPKKNVASWVS----L 236
N CS +L ++L G++ + + VS L
Sbjct: 191 REAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGL 250
Query: 237 IDGFMRKGDLKKAGELFEQMPEKGVVSWTAMINGFSQNGEAEKALAMFFQMLDAGVRAND 296
ID + + ++ + +F +M K VSW +++ + QN E EKA ++ + V +D
Sbjct: 251 IDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSD 310
Query: 297 FTVVSALSACAKVGALEAGVRVHNYI--SCNDFGLKGAIGTALVDMYAKCGNIEAASLVF 354
F + S LSACA + LE G +H + +C + + +G+ALVDMY KCG IE + F
Sbjct: 311 FMISSVLSACAGMAGLELGRSIHAHAVKACVERTI--FVGSALVDMYGKCGCIEDSEQAF 368
Query: 355 GETKEKDLLTWTAMIWGLAIHGRYEQAIQYFKKMMY--SGTEPDGTVFLAILTACWYSGQ 412
E EK+L+T ++I G A G+ + A+ F++M G P+ F+++L+AC +G
Sbjct: 369 DEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGA 428
Query: 413 VKLALNFFDSMRFDYFIEPSVKHHTVVVNLLSRVGQDSQGY------------------Q 454
V+ + FDSMR Y IEP +H++ +V++L R G + Y Q
Sbjct: 429 VENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQ 488
Query: 455 NSQNSFTK----------LLQLKPKHPSSYVLLSNIYAAEGRWKDVARVRTLMQRRSIKK 504
N+ K L +L PK ++VLLSN +AA GRW + VR ++ IKK
Sbjct: 489 NACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKK 548
Query: 505 DPGWSYIEVNGHVHRFEAG--GHKLAKEIHSKLEDIMAGAREQGYMPGTEWVLHNIKEEK 562
G+S+I V VH F+A H L KEI + L + GY P + L++++EE+
Sbjct: 549 GAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYDLEEEE 608
Query: 563 EEA-LGCHSEKLALAFGLIQTTPGTTIKIVKKLTICGDCHSLMKYASKISQREIVLRD-T 620
+ A + HSEKLALAFGL+ I+I K L ICGDCHS K+ S +REI++RD
Sbjct: 609 KAAEVSHHSEKLALAFGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRDNN 668
Query: 621 RFHYFKDGTCSCRDYW 636
RFH FKDG CSC+DYW
Sbjct: 669 RFHRFKDGICSCKDYW 684
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 99/212 (46%), Gaps = 6/212 (2%)
Query: 199 VLLWNVLINGCSKIGYLRKA--VELFGMMPKKNVASWVSLIDGFMRKGDLKKAGELFEQM 256
+LL N + ++G + A V+ P +A++ LI+ + + + A +
Sbjct: 11 LLLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANY--LINMYSKLDHPESARLVLRLT 68
Query: 257 PEKGVVSWTAMINGFSQNGEAEKALAMFFQMLDAGVRANDFTVVSALSACAKVGALEAGV 316
P + VVSWT++I+G +QNG AL FF+M GV NDFT A A A + G
Sbjct: 69 PARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGK 128
Query: 317 RVHNY-ISCNDFGLKGAIGTALVDMYAKCGNIEAASLVFGETKEKDLLTWTAMIWGLAIH 375
++H + C L +G + DMY K + A +F E E++L TW A I
Sbjct: 129 QIHALAVKCGRI-LDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTD 187
Query: 376 GRYEQAIQYFKKMMYSGTEPDGTVFLAILTAC 407
GR +AI+ F + P+ F A L AC
Sbjct: 188 GRPREAIEAFIEFRRIDGHPNSITFCAFLNAC 219
>sp|A8MQA3|PP330_ARATH Pentatricopeptide repeat-containing protein At4g21065
OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2
Length = 595
Score = 339 bits (869), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 208/589 (35%), Positives = 313/589 (53%), Gaps = 85/589 (14%)
Query: 130 LTYPFVSKSVASL-----SLLSLGRGLHCLIVKSGVEY-DAFVRVHLADMYVQLGKTRG- 182
L P V K + L S ++ R +H ++ GV DA + HL V L
Sbjct: 10 LLLPMVEKCINLLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPM 69
Query: 183 --AFKVFDETPEKNKSESVLLWNVLINGCSKIGYLRKAVELFGMM-------PKKNVASW 233
A KVF + K +V +WN LI G ++IG A L+ M P + +
Sbjct: 70 SYAHKVFSKI---EKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPF 126
Query: 234 V---------------------------------SLIDGFMRKGDLKKAGELFEQMPEKG 260
+ SL+ + GD+ A ++F++MPEK
Sbjct: 127 LIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKD 186
Query: 261 VVSWTAMINGFSQNGEAEKALAMFFQMLDAGVRANDFTVVSALSACAKVGALEAGVRVHN 320
+V+W ++INGF++NG+ E+ALA++ +M G++ + FT+VS LSACAK+GAL G RVH
Sbjct: 187 LVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHV 246
Query: 321 YISCNDFGLKGAIGTALVDMYAKCGNIEAASLVFGETKEKDLLTWTAMIWGLAIHGRYEQ 380
Y+ L+D+YA+CG +E A +F E +K+ ++WT++I GLA++G ++
Sbjct: 247 YMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKE 306
Query: 381 AIQYFKKMMYS-GTEPDGTVFLAILTACWYSGQVKLALNFFDSMRFDYFIEPSVKHHTVV 439
AI+ FK M + G P F+ IL AC + G VK +F MR +Y IEP ++H +
Sbjct: 307 AIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCM 366
Query: 440 VNLLSRVGQDSQGYQN----------------------------SQNSFTKLLQLKPKHP 471
V+LL+R GQ + Y+ ++ + ++LQL+P H
Sbjct: 367 VDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHS 426
Query: 472 SSYVLLSNIYAAEGRWKDVARVRTLMQRRSIKKDPGWSYIEVNGHVHRFEAG--GHKLAK 529
YVLLSN+YA+E RW DV ++R M R +KK PG S +EV VH F G H +
Sbjct: 427 GDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSD 486
Query: 530 EIHSKLEDIMAGAREQGYMPGTEWVLHNI-KEEKEEALGCHSEKLALAFGLIQTTPGTTI 588
I++KL+++ R +GY+P V ++ +EEKE A+ HSEK+A+AF LI T + I
Sbjct: 487 AIYAKLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPI 546
Query: 589 KIVKKLTICGDCHSLMKYASKISQREIVLRD-TRFHYFKDGTCSCRDYW 636
+VK L +C DCH +K SK+ REIV+RD +RFH+FK+G+CSC+DYW
Sbjct: 547 TVVKNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
Score = 131 bits (329), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 112/421 (26%), Positives = 198/421 (47%), Gaps = 58/421 (13%)
Query: 42 NSTKQLRQIHAQIILHNL-FASSRITTQLI---SSASLHKSIDYALSIFDHFT-PKNLHI 96
+S +LRQIHA I H + + + + LI S + YA +F P N+ I
Sbjct: 28 SSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFI 87
Query: 97 FNVLIRGLAENSHFQSCISHFVFMLRLS--VRPNRLTYPFVSKSVASLSLLSLGRGLHCL 154
+N LIRG AE + S S + M R+S V P+ TYPF+ K+V +++ + LG +H +
Sbjct: 88 WNTLIRGYAEIGNSISAFSLYREM-RVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSV 146
Query: 155 IVKSGVEYDAFVRVHLADMYVQLGKTRGAFKVFDETPEKNKSESVLLWNVLING------ 208
+++SG +V+ L +Y G A+KVFD+ PEK+ ++ WN +ING
Sbjct: 147 VIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKD----LVAWNSVINGFAENGK 202
Query: 209 -----------------------------CSKIGYL----RKAVELFGMMPKKNVASWVS 235
C+KIG L R V + + +N+ S
Sbjct: 203 PEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNV 262
Query: 236 LIDGFMRKGDLKKAGELFEQMPEKGVVSWTAMINGFSQNGEAEKALAMFFQMLDA-GVRA 294
L+D + R G +++A LF++M +K VSWT++I G + NG ++A+ +F M G+
Sbjct: 263 LLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLP 322
Query: 295 NDFTVVSALSACAKVGALEAGVRVHNYISCNDFGLKGAIG--TALVDMYAKCGNIEAA-S 351
+ T V L AC+ G ++ G + ++ ++ I +VD+ A+ G ++ A
Sbjct: 323 CEITFVGILYACSHCGMVKEGFEYFRRMR-EEYKIEPRIEHFGCMVDLLARAGQVKKAYE 381
Query: 352 LVFGETKEKDLLTWTAMIWGLAIHGRYEQAIQYFKKMMYSGTEPDGTVFLAILTACWYSG 411
+ + +++ W ++ +HG + + F ++ EP+ + +L+ + S
Sbjct: 382 YIKSMPMQPNVVIWRTLLGACTVHG--DSDLAEFARIQILQLEPNHSGDYVLLSNMYASE 439
Query: 412 Q 412
Q
Sbjct: 440 Q 440
>sp|Q9FFG8|PP417_ARATH Pentatricopeptide repeat-containing protein At5g44230
OS=Arabidopsis thaliana GN=PCMP-H17 PE=2 SV=1
Length = 657
Score = 338 bits (867), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 204/643 (31%), Positives = 333/643 (51%), Gaps = 73/643 (11%)
Query: 32 THIISLIHSSNSTKQLRQIHAQIILHNLFASSRITTQLISSAS-LHKSID-YALSIFDHF 89
+ +IS + + Q++QIH ++ L S I T+LI + + L +D YA + +
Sbjct: 50 SSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPV 109
Query: 90 TPKNLHIFNVLIRGLAENSHFQSCISHFVFMLRLSVRPNRLTYPFVSKSVASLSLLSLGR 149
+N ++ +IRG A F I+ + M + + P T+ + K+ ++ L+LGR
Sbjct: 110 QFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGR 169
Query: 150 GLHCLIVKSGVEYDAFVRVHLADMYVQLGKTRGAFKVFDETPEKNKSESVLLWNVLINGC 209
H + +V + DMYV+ A KVFDE
Sbjct: 170 QFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDE-------------------- 209
Query: 210 SKIGYLRKAVELFGMMPKKNVASWVSLIDGFMRKGDLKKAGELFEQMPEKGVVSWTAMIN 269
MP+++V SW LI + R G+++ A ELFE +P K +V+WTAM+
Sbjct: 210 ---------------MPERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVT 254
Query: 270 GFSQNGEAEKALAMFFQMLDAGVRANDFTVVSALSACAKVGALEAGVRVHNYISCNDFGL 329
GF+QN + ++AL F +M +G+RA++ TV +SACA++GA + R + +
Sbjct: 255 GFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSP 314
Query: 330 KG--AIGTALVDMYAKCGNIEAASLVFGETKEKDLLTWTAMIWGLAIHGRYEQAIQYFKK 387
IG+AL+DMY+KCGN+E A VF K++ T+++MI GLA HGR ++A+ F
Sbjct: 315 SDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHY 374
Query: 388 MM-YSGTEPDGTVFLAILTACWYSGQVKLALNFFDSMRFDYFIEPSVKHHTVVVNLLSRV 446
M+ + +P+ F+ L AC +SG V FDSM + ++P+ H+T +V+LL R
Sbjct: 375 MVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRT 434
Query: 447 GQDSQGYQ----------------------------NSQNSFTKLLQLKPKHPSSYVLLS 478
G+ + + ++ + L +L+P +Y+LLS
Sbjct: 435 GRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAEHLFELEPDIIGNYILLS 494
Query: 479 NIYAAEGRWKDVARVRTLMQRRSIKKDPGWSYI-EVNGHVHRFEAGG--HKLAKEIHSKL 535
N+YA+ G W V RVR L++ + +KK P S++ + NG +H+F G H ++ +I KL
Sbjct: 495 NVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKNGQMHKFFPGNLNHPMSNKIQDKL 554
Query: 536 EDIMAGAREQGYMPGTEWVLHNIKEE-KEEALGCHSEKLALAFGLIQTTPGTTIKIVKKL 594
E+++ GY P V +++ + K L H+EKLALAF L+ T +TI I+K L
Sbjct: 555 EELVERLTVLGYQPDLSSVPYDVSDNAKRLILIQHTEKLALAFSLLTTNRDSTITIMKNL 614
Query: 595 TICGDCHSLMKYASKISQREIVLRDT-RFHYFKDGTCSCRDYW 636
+C DCH M+ AS+++ + I++RD RFH+F+ G CSC D+W
Sbjct: 615 RMCLDCHKFMRLASEVTGKVIIMRDNMRFHHFRSGDCSCGDFW 657
>sp|Q56XI1|PPR25_ARATH Pentatricopeptide repeat-containing protein At1g09410
OS=Arabidopsis thaliana GN=PCMP-H18 PE=2 SV=2
Length = 705
Score = 336 bits (862), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 202/634 (31%), Positives = 327/634 (51%), Gaps = 79/634 (12%)
Query: 69 LISSASLHKSIDYALSIFDHFTPKNLHIFNVLIRGLAENSHFQSCISHFVFMLRLSVRPN 128
L+S + ID A +FD +N+ + L++G N S F M P
Sbjct: 85 LVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKM------PE 138
Query: 129 RLTYPFVSKSVASLSLLSLGR-GLHCLIVKSGVEYDAFVRVHLADMYVQLGKTRGAFKVF 187
+ VS +V + L GR C + + + D R + + G+ A ++F
Sbjct: 139 KNK---VSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIF 195
Query: 188 DETPEKNKSESVLLWNVLINGCSKIGYLRKAVELFGMMPKKNVASWVSLIDGFMRKGDLK 247
DE E+ SV+ W ++ G + + A ++F +MP+K SW S++ G+++ G ++
Sbjct: 196 DEMSER----SVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIE 251
Query: 248 KAGELFEQMPEKGVVSWTAMINGFSQNGEAEKA--------------------------- 280
A ELFE MP K V++ AMI+G Q GE KA
Sbjct: 252 DAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGF 311
Query: 281 ----LAMFFQMLDAGVRANDFTVVSALSACAKVGALEAGVRVHNYISCNDFGLKGAIGTA 336
L +F M GVR T++S LS CA + +L G +VH + F + + +
Sbjct: 312 ELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASV 371
Query: 337 LVDMYAKCGNIEAASLVFGETKEKDLLTWTAMIWGLAIHGRYEQAIQYFKKMMYSG-TEP 395
L+ MY KCG + + L+F KD++ W ++I G A HG E+A++ F +M SG T+P
Sbjct: 372 LMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKP 431
Query: 396 DGTVFLAILTACWYSGQVKLALNFFDSMRFDYFIEPSVKHHTVVVNLLSRVGQDSQGYQ- 454
+ F+A L+AC Y+G V+ L ++SM + ++P H+ +V++L R G+ ++ +
Sbjct: 432 NEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEM 491
Query: 455 ----------------------NSQNSFT-----KLLQLKPKHPSSYVLLSNIYAAEGRW 487
+SQ KL++++P++ +Y+LLSN+YA++GRW
Sbjct: 492 IDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRW 551
Query: 488 KDVARVRTLMQRRSIKKDPGWSYIEVNGHVHRFEAGG---HKLAKEIHSKLEDIMAGARE 544
DVA +R LM+ R ++K PG S+ EV VH F GG H + I L+++ RE
Sbjct: 552 ADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKILDELDGLLRE 611
Query: 545 QGYMPGTEWVLHNI-KEEKEEALGCHSEKLALAFGLIQTTPGTTIKIVKKLTICGDCHSL 603
GY P + LH++ +EEK +L HSE+LA+A+ L++ + G I+++K L +C DCH+
Sbjct: 612 AGYNPDCSYALHDVDEEEKVNSLKYHSERLAVAYALLKLSEGIPIRVMKNLRVCSDCHTA 671
Query: 604 MKYASKISQREIVLRD-TRFHYFKDGTCSCRDYW 636
+K SK+ +REI+LRD RFH+F++G CSC+DYW
Sbjct: 672 IKIISKVKEREIILRDANRFHHFRNGECSCKDYW 705
Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 125/246 (50%), Gaps = 20/246 (8%)
Query: 181 RGAFKVFDETPEKNKSESVLLWNVLINGCSKIGYLRKAVELFGMMPKKNVASWVSLIDGF 240
R A K+FDE P++N ++ WN L++G K G + +A ++F +MP++NV SW +L+ G+
Sbjct: 65 RDARKLFDEMPDRN----IISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGY 120
Query: 241 MRKGDLKKAGELFEQMPEKGVVSWTAMINGFSQNGEAEKALAMFFQMLDAGVRANDFTVV 300
+ G + A LF +MPEK VSWT M+ GF Q+G + A ++ + D ++
Sbjct: 121 VHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPD----KDNIART 176
Query: 301 SALSACAKVGALEAGVRVHNYISCNDFGLKGAIGTALVDMYAKCGNIEAASLVFGETKEK 360
S + K G ++ + + +S T +V Y + ++ A +F EK
Sbjct: 177 SMIHGLCKEGRVDEAREIFDEMSERSV----ITWTTMVTGYGQNNRVDDARKIFDVMPEK 232
Query: 361 DLLTWTAMIWGLAIHGRYEQAIQYFKKMMYSGTEPDGTVFL--AILTACWYSGQVKLALN 418
++WT+M+ G +GR E A + F+ M P V A+++ G++ A
Sbjct: 233 TEVSWTSMLMGYVQNGRIEDAEELFEVM------PVKPVIACNAMISGLGQKGEIAKARR 286
Query: 419 FFDSMR 424
FDSM+
Sbjct: 287 VFDSMK 292
Score = 83.6 bits (205), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 127/301 (42%), Gaps = 57/301 (18%)
Query: 203 NVLINGCSKIGYLRKAVELFGMMPKKNVASWVSLIDGFMRKGDLKKAGELFEQMPEKGVV 262
NV I S+IG + +A +LF K+++SW S++ G+ + A +LF++MP++ ++
Sbjct: 21 NVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNII 80
Query: 263 SWTAMINGFSQNGEAEKALAMFFQMLDAGVRANDFTVVSALSACAKVGALEAGVRVHNYI 322
SW +++G+ +NGE ++A +F M + N +
Sbjct: 81 SWNGLVSGYMKNGEIDEARKVFDLMPE-----------------------------RNVV 111
Query: 323 SCNDFGLKGAIGTALVDMYAKCGNIEAASLVFGETKEKDLLTWTAMIWGLAIHGRYEQAI 382
S TALV Y G ++ A +F + EK+ ++WT M+ G GR + A
Sbjct: 112 S----------WTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDAC 161
Query: 383 QYFKKMMYSGTEPDGTVFLAILTACWYSGQVKLALNFFDSMRFDYFIEPSVKHHTVVVNL 442
+ ++ + + D +++ G+V A FD M E SV T +V
Sbjct: 162 KLYEMI----PDKDNIARTSMIHGLCKEGRVDEAREIFDEMS-----ERSVITWTTMVT- 211
Query: 443 LSRVGQDSQGYQNSQNSFTKLLQLKP-KHPSSYVLLSNIYAAEGRWKDVARVRTLMQRRS 501
G N + K+ + P K S+ + Y GR +D + +M +
Sbjct: 212 -------GYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKP 264
Query: 502 I 502
+
Sbjct: 265 V 265
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 336 bits (861), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 210/662 (31%), Positives = 338/662 (51%), Gaps = 90/662 (13%)
Query: 56 LHNLFASSRITTQLISSASLH------KSIDYALSIFDHFTPKNLHIFNVLIRGLAENSH 109
+H L S + L + L + ++ A +FD ++L +N ++ G ++N
Sbjct: 157 IHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGM 216
Query: 110 FQSCISHFVFMLRLSVRPNRLTYPFVSKSVASLSLLSLGRGLHCLIVKSGVEYDAFVRVH 169
+ + M +++P+ +T V +V++L L+S+G+ +H ++SG + +
Sbjct: 217 ARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTA 276
Query: 170 LADMYVQLGKTRGAFKVFDETPEKNKSESVLLWNVLING--------------------- 208
L DMY + G A ++FD E+N V+ WN +I+
Sbjct: 277 LVDMYAKCGSLETARQLFDGMLERN----VVSWNSMIDAYVQNENPKEAMLIFQKMLDEG 332
Query: 209 --------------CSKIGYLRK-------AVELFGMMPKKNVASWVSLIDGFMRKGDLK 247
C+ +G L + +VEL G+ +NV+ SLI + + ++
Sbjct: 333 VKPTDVSVMGALHACADLGDLERGRFIHKLSVEL-GL--DRNVSVVNSLISMYCKCKEVD 389
Query: 248 KAGELFEQMPEKGVVSWTAMINGFSQNGEAEKALAMFFQMLDAGVRANDFTVVSALSACA 307
A +F ++ + +VSW AMI GF+QNG AL F QM V+ + FT VS ++A A
Sbjct: 390 TAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIA 449
Query: 308 KVGALEAGVRVHNYI--SCNDFGLKGAIGTALVDMYAKCGNIEAASLVFGETKEKDLLTW 365
++ +H + SC D + + TALVDMYAKCG I A L+F E+ + TW
Sbjct: 450 ELSITHHAKWIHGVVMRSCLDKNV--FVTTALVDMYAKCGAIMIARLIFDMMSERHVTTW 507
Query: 366 TAMIWGLAIHGRYEQAIQYFKKMMYSGTEPDGTVFLAILTACWYSGQVKLALNFFDSMRF 425
AMI G HG + A++ F++M +P+G FL++++AC +SG V+ L F M+
Sbjct: 508 NAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKE 567
Query: 426 DYFIEPSVKHHTVVVNLLSRVGQDSQGYQN----------------------------SQ 457
+Y IE S+ H+ +V+LL R G+ ++ + ++
Sbjct: 568 NYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAE 627
Query: 458 NSFTKLLQLKPKHPSSYVLLSNIYAAEGRWKDVARVRTLMQRRSIKKDPGWSYIEVNGHV 517
+ +L +L P +VLL+NIY A W+ V +VR M R+ ++K PG S +E+ V
Sbjct: 628 KAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEV 687
Query: 518 HRFEAG--GHKLAKEIHSKLEDIMAGAREQGYMPGTEWVLHNIKEEKEEALGCHSEKLAL 575
H F +G H +K+I++ LE ++ +E GY+P T VL + KE+ L HSEKLA+
Sbjct: 688 HSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVLGVENDVKEQLLSTHSEKLAI 747
Query: 576 AFGLIQTTPGTTIKIVKKLTICGDCHSLMKYASKISQREIVLRDT-RFHYFKDGTCSCRD 634
+FGL+ TT GTTI + K L +C DCH+ KY S ++ REIV+RD RFH+FK+G CSC D
Sbjct: 748 SFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGD 807
Query: 635 YW 636
YW
Sbjct: 808 YW 809
Score = 195 bits (496), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 119/418 (28%), Positives = 208/418 (49%), Gaps = 43/418 (10%)
Query: 28 NITETHIISLIHSSNSTKQLRQIHAQIILHNLFASSRITTQLISSASLHKSIDYALSIFD 87
N+ E L+ +S K+LRQI + + L+ T+L+S + S+D A +F+
Sbjct: 34 NVYEHPAALLLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFE 93
Query: 88 HFTPKNLHIFNVLIRGLAENSHFQSCISHFVFMLRLSVRPNRLTYPFVSKSVASLSLLSL 147
K +++ +++G A+ S + FV M V P + ++ K + L +
Sbjct: 94 PIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRV 153
Query: 148 GRGLHCLIVKSGVEYDAFVRVHLADMYVQLGKTRGAFKVFDETPEKNKSESVLLWNVLIN 207
G+ +H L+VKSG D F L +MY + + A KVFD PE++ ++ WN ++
Sbjct: 154 GKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERD----LVSWNTIVA 209
Query: 208 GCSKIGYLRKAVELFGMMPKKNV-ASWVS------------------------------- 235
G S+ G R A+E+ M ++N+ S+++
Sbjct: 210 GYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDS 269
Query: 236 -------LIDGFMRKGDLKKAGELFEQMPEKGVVSWTAMINGFSQNGEAEKALAMFFQML 288
L+D + + G L+ A +LF+ M E+ VVSW +MI+ + QN ++A+ +F +ML
Sbjct: 270 LVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKML 329
Query: 289 DAGVRANDFTVVSALSACAKVGALEAGVRVHNYISCNDFGLKGAIGTALVDMYAKCGNIE 348
D GV+ D +V+ AL ACA +G LE G +H ++ +L+ MY KC ++
Sbjct: 330 DEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVD 389
Query: 349 AASLVFGETKEKDLLTWTAMIWGLAIHGRYEQAIQYFKKMMYSGTEPDGTVFLAILTA 406
A+ +FG+ + + L++W AMI G A +GR A+ YF +M +PD +++++TA
Sbjct: 390 TAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITA 447
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 123/270 (45%), Gaps = 16/270 (5%)
Query: 30 TETHIISLIHSSNSTKQL---RQIHAQIILHNLFASSRITTQLISSASLHKSIDYALSIF 86
T+ ++ +H+ L R IH + L + + LIS K +D A S+F
Sbjct: 336 TDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMF 395
Query: 87 DHFTPKNLHIFNVLIRGLAENSHFQSCISHFVFMLRLSVRPNRLTYPFVSKSVASLSLLS 146
+ L +N +I G A+N +++F M +V+P+ TY V ++A LS+
Sbjct: 396 GKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITH 455
Query: 147 LGRGLHCLIVKSGVEYDAFVRVHLADMYVQLGKTRGAFKVFDETPEKNKSESVLLWNVLI 206
+ +H ++++S ++ + FV L DMY + G A +FD E++ V WN +I
Sbjct: 456 HAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERH----VTTWNAMI 511
Query: 207 NGCSKIGYLRKAVELFGMMP----KKNVASWVSLIDGFMRKGDLKKAGELFEQMPEKGVV 262
+G G+ + A+ELF M K N +++S+I G ++ + F M E +
Sbjct: 512 DGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSI 571
Query: 263 S-----WTAMINGFSQNGEAEKALAMFFQM 287
+ AM++ + G +A QM
Sbjct: 572 ELSMDHYGAMVDLLGRAGRLNEAWDFIMQM 601
Score = 41.6 bits (96), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 41/82 (50%)
Query: 335 TALVDMYAKCGNIEAASLVFGETKEKDLLTWTAMIWGLAIHGRYEQAIQYFKKMMYSGTE 394
T LV ++ + G+++ A+ VF K + + M+ G A ++A+Q+F +M Y E
Sbjct: 73 TKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVE 132
Query: 395 PDGTVFLAILTACWYSGQVKLA 416
P F +L C ++++
Sbjct: 133 PVVYNFTYLLKVCGDEAELRVG 154
Score = 39.3 bits (90), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 51/262 (19%), Positives = 110/262 (41%), Gaps = 15/262 (5%)
Query: 8 RLTTAIAPTTNIKSSHKPSNNITETHIISLIHSSNSTKQLRQIHAQIILHNLFASSRITT 67
R A+ + ++S + T +I+ I + T + IH ++ L + +TT
Sbjct: 418 RPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTT 477
Query: 68 QLISSASLHKSIDYALSIFDHFTPKNLHIFNVLIRGLAENSHFQSCISHFVFMLRLSVRP 127
L+ + +I A IFD + +++ +N +I G + ++ + F M + +++P
Sbjct: 478 ALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKP 537
Query: 128 NRLTYPFVSKSVASLSLLSLGRGLHCLIVKS---GVEYDAFVRVHLADMYVQLGKTRGAF 184
N +T+ V + + L+ GL C + +E + D+ + G+ A+
Sbjct: 538 NGVTFLSVISACSHSGLVE--AGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAW 595
Query: 185 KVFDETPEKNKSESVLLWNVLINGCS---KIGYLRKAVE-LFGMMPKKNVASWVSLIDGF 240
+ P K +V ++ ++ C + + KA E LF + P + L+
Sbjct: 596 DFIMQMPVK---PAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDD--GGYHVLLANI 650
Query: 241 MRKGDL-KKAGELFEQMPEKGV 261
R + +K G++ M +G+
Sbjct: 651 YRAASMWEKVGQVRVSMLRQGL 672
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 333 bits (855), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 204/651 (31%), Positives = 320/651 (49%), Gaps = 68/651 (10%)
Query: 19 IKSSHKPSNNITETHIISLIHSSNSTKQLRQIHAQIILHNLFASSRITTQLISSASLHKS 78
++ N++T +IS + +++A I + + + + L+ +
Sbjct: 227 VRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNA 286
Query: 79 IDYALSIFDHFTPKNLHIFNVLIRGLAENSHFQSCISHFVFMLRLSVRPNRLTYPFVSKS 138
ID A +FD + NL + N + + + F M+ VRP+R++ S
Sbjct: 287 IDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISS 346
Query: 139 VASLSLLSLGRGLHCLIVKSGVEYDAFVRVHLADMYVQLGKTRGAFKVFDETPEKNKSES 198
+ L + G+ H ++++G E + L DMY++ + AF++FD
Sbjct: 347 CSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDR--------- 397
Query: 199 VLLWNVLINGCSKIGYLRKAVELFGMMPKKNVASWVSLIDGFMRKGDLKKAGELFEQMPE 258
M K V +W S++ G++ G++ A E FE MPE
Sbjct: 398 --------------------------MSNKTVVTWNSIVAGYVENGEVDAAWETFETMPE 431
Query: 259 KGVVSWTAMINGFSQNGEAEKALAMFFQML-DAGVRANDFTVVSALSACAKVGALEAGVR 317
K +VSW +I+G Q E+A+ +F M GV A+ T++S SAC +GAL+
Sbjct: 432 KNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKW 491
Query: 318 VHNYISCNDFGLKGAIGTALVDMYAKCGNIEAASLVFGETKEKDLLTWTAMIWGLAIHGR 377
++ YI N L +GT LVDM+++CG+ E+A +F +D+ WTA I +A+ G
Sbjct: 492 IYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGN 551
Query: 378 YEQAIQYFKKMMYSGTEPDGTVFLAILTACWYSGQVKLALNFFDSMRFDYFIEPSVKHHT 437
E+AI+ F M+ G +PDG F+ LTAC + G V+ F SM + + P H+
Sbjct: 552 AERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYG 611
Query: 438 VVVNLLSRVGQDSQGYQNSQN----------------------------SFTKLLQLKPK 469
+V+LL R G + Q ++ + K+ L P+
Sbjct: 612 CMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPE 671
Query: 470 HPSSYVLLSNIYAAEGRWKDVARVRTLMQRRSIKKDPGWSYIEVNGHVHRFEAG--GHKL 527
SYVLLSN+YA+ GRW D+A+VR M+ + ++K PG S I++ G H F +G H
Sbjct: 672 RTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPE 731
Query: 528 AKEIHSKLEDIMAGAREQGYMPGTEWVLHNIKE-EKEEALGCHSEKLALAFGLIQTTPGT 586
I + L+++ A G++P VL ++ E EK L HSEKLA+A+GLI + GT
Sbjct: 732 MPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGT 791
Query: 587 TIKIVKKLTICGDCHSLMKYASKISQREIVLRD-TRFHYFKDGTCSCRDYW 636
TI+IVK L +C DCHS K+ASK+ REI+LRD RFHY + G CSC D+W
Sbjct: 792 TIRIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDFW 842
Score = 153 bits (386), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 136/542 (25%), Positives = 231/542 (42%), Gaps = 93/542 (17%)
Query: 1 MKGHVFNRLTTAIAPTTNIKSSHKPSNNITETHIISLIHSSNSTKQLRQIHAQIILHNLF 60
M G+V + +A TT K S + T+ SL + + +L+ H + L
Sbjct: 3 MLGNVLHLSPMVLATTTTTKPSLLNQSKCTKATPSSL-KNCKTIDELKMFHRSLTKQGLD 61
Query: 61 ASSRITTQLISSA---SLHKSIDYALSIFDHFTP-KNLHIFNVLIRGLAENSHFQSCISH 116
T+L++ + +S+ +A +F++ ++N LIRG A + I
Sbjct: 62 NDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILL 121
Query: 117 FVFMLRLSVRPNRLTYPFVSKSVASLSLLSLGRGLHCLIVKSGVEYDAFVRVHLADMYVQ 176
F+ M+ + P++ T+PF + A G +H LIVK G D FV+ L Y +
Sbjct: 122 FLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAE 181
Query: 177 LGKTRGAFKVFDETPEKNKSESVLLWNVLINGCSKIGYLRKAVELFGMMPKK-----NVA 231
G+ A KVFDE E+N V+ W +I G ++ + + AV+LF M + N
Sbjct: 182 CGELDSARKVFDEMSERN----VVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSV 237
Query: 232 SWV-----------------------------------SLIDGFMRKGDLKKAGELFEQM 256
+ V +L+D +M+ + A LF++
Sbjct: 238 TMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEY 297
Query: 257 PEKGVVSWTAMINGFSQNGEAEKALAMFFQMLDAGVRANDFTVVSALSACAKVGALEAGV 316
+ AM + + + G +AL +F M+D+GVR + +++SA+S+C+++ + G
Sbjct: 298 GASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGK 357
Query: 317 RVHNYISCNDFGLKGAIGTALVDMYAKC-------------------------------G 345
H Y+ N F I AL+DMY KC G
Sbjct: 358 SCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENG 417
Query: 346 NIEAASLVFGETKEKDLLTWTAMIWGLAIHGRYEQAIQYFKKMM-YSGTEPDGTVFLAIL 404
++AA F EK++++W +I GL +E+AI+ F M G DG ++I
Sbjct: 418 EVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIA 477
Query: 405 TACWYSGQVKLALNFFDSMRFDYFIEPS-----VKHHTVVVNLLSRVGQDSQGYQNSQNS 459
+AC + G + LA + Y+IE + V+ T +V++ SR G D + + NS
Sbjct: 478 SACGHLGALDLAKWIY------YYIEKNGIQLDVRLGTTLVDMFSRCG-DPESAMSIFNS 530
Query: 460 FT 461
T
Sbjct: 531 LT 532
>sp|Q9FRI5|PPR57_ARATH Pentatricopeptide repeat-containing protein At1g25360
OS=Arabidopsis thaliana GN=PCMP-H74 PE=2 SV=1
Length = 790
Score = 332 bits (850), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 207/658 (31%), Positives = 336/658 (51%), Gaps = 57/658 (8%)
Query: 24 KPSNNITETHIISLIHSSNSTKQLRQIHAQIILHNLFASSRITTQLIS----SASLHKSI 79
KP N + + L ++ KQ Q HA + + ++ L+S AS +
Sbjct: 145 KPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLL 204
Query: 80 DYALSIFDHFTPKNLHIFNVLIRGLAENSHF---QSCISHFVFMLRLSVRPNRLTYPFVS 136
A +FD K+ + ++ G +N +F + + ++L V N + +V+
Sbjct: 205 HSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKL-VAYNAMISGYVN 263
Query: 137 KSVASLSLLSLGRGLHCLIVKSGVEYDAF-----VRVHLADMYVQLGKTRGAFKVFDETP 191
+ +L + R +V SG+E D F +R +QLGK A+ +
Sbjct: 264 RGFYQEALEMVRR-----MVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVL----- 313
Query: 192 EKNKSESVLLWNVLINGCSKIGYLRKAVELFGMMPKKNVASWVSLIDGFMRKGDLKKAGE 251
+ + S N L++ K G +A +F MP K++ SW +L+ G++ G + +A
Sbjct: 314 -RREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKL 372
Query: 252 LFEQMPEKGVVSWTAMINGFSQNGEAEKALAMFFQMLDAGVRANDFTVVSALSACAKVGA 311
+F++M EK ++SW MI+G ++NG E+ L +F M G D+ A+ +CA +GA
Sbjct: 373 IFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGA 432
Query: 312 LEAGVRVHNYISCNDFGLKGAIGTALVDMYAKCGNIEAASLVFGETKEKDLLTWTAMIWG 371
G + H + F + G AL+ MYAKCG +E A VF D ++W A+I
Sbjct: 433 YCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAA 492
Query: 372 LAIHGRYEQAIQYFKKMMYSGTEPDGTVFLAILTACWYSGQVKLALNFFDSMRFDYFIEP 431
L HG +A+ +++M+ G PD L +LTAC ++G V +FDSM Y I P
Sbjct: 493 LGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPP 552
Query: 432 SVKHHTVVVNLLSRVGQDSQGYQNSQN----------------------------SFTKL 463
H+ +++LL R G+ S ++ + KL
Sbjct: 553 GADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKL 612
Query: 464 LQLKPKHPSSYVLLSNIYAAEGRWKDVARVRTLMQRRSIKKDPGWSYIEVNGHVHRF--E 521
L P+H +Y+LLSN++AA G+W++VARVR LM+ R +KK+ S+IE+ VH F +
Sbjct: 613 FGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVD 672
Query: 522 AGGHKLAKEIHSKLEDIMAGAREQGYMPGTEWVLHNIKEE--KEEALGCHSEKLALAFGL 579
H A+ ++ L+D+ R GY+P T +VLH+++ + KE+ L HSEK+A+AFGL
Sbjct: 673 DTSHPEAEAVYIYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGL 732
Query: 580 IQTTPGTTIKIVKKLTICGDCHSLMKYASKISQREIVLRD-TRFHYFKDGTCSCRDYW 636
++ PGTTI+I K L CGDCH+ ++ S + QR+I+LRD RFH+F++G CSC ++W
Sbjct: 733 MKLPPGTTIRIFKNLRTCGDCHNFFRFLSWVVQRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 89.0 bits (219), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 116/255 (45%), Gaps = 39/255 (15%)
Query: 201 LWNVLINGCSKIGYLRKAVELFGMMPKKNVASWVSLIDGFMRKGDLKKAGELFEQMP--E 258
+ N LI+ K L A +LF + + + + +++ G+ GD+ A +FE+ P
Sbjct: 51 ILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCM 110
Query: 259 KGVVSWTAMINGFSQNGEAEKALAMFFQMLDAGVRANDFTVVSALSACAKVGALEAG-VR 317
+ V + AMI GFS N + A+ +F +M G + ++FT S L+ A V E V+
Sbjct: 111 RDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQ 170
Query: 318 VHNYISCNDFGLKGAIGTALVDMYAKCGN----IEAASLVFGETKEKDLLTWT------- 366
H + G ++ ALV +Y+KC + + +A VF E EKD +WT
Sbjct: 171 FHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYV 230
Query: 367 -------------------------AMIWGLAIHGRYEQAIQYFKKMMYSGTEPDGTVFL 401
AMI G G Y++A++ ++M+ SG E D +
Sbjct: 231 KNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYP 290
Query: 402 AILTACWYSGQVKLA 416
+++ AC +G ++L
Sbjct: 291 SVIRACATAGLLQLG 305
Score = 37.0 bits (84), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 57/144 (39%), Gaps = 2/144 (1%)
Query: 311 ALEAGVRVHNYISCNDFGLKGAIGTALVDMYAKCGNIEAASLVFGETKEKDLLTWTAMIW 370
+L+ VH I F + I L+D+Y K + A +F E E D + T M+
Sbjct: 29 SLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVS 88
Query: 371 GLAIHGRYEQAIQYFKKMMYSGTEPDGTVFLAILTACWYSGQVKLALNFFDSMRFDYFIE 430
G G A F+K D ++ A++T ++ A+N F M+ + F
Sbjct: 89 GYCASGDITLARGVFEKAPVCMR--DTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKP 146
Query: 431 PSVKHHTVVVNLLSRVGQDSQGYQ 454
+ +V+ L + Q Q
Sbjct: 147 DNFTFASVLAGLALVADDEKQCVQ 170
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 331 bits (849), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 194/577 (33%), Positives = 308/577 (53%), Gaps = 65/577 (11%)
Query: 93 NLHIFNVLIRGLAENSHFQSCISHFVFMLRLSVRPNRLTYPFVSKSVASLSLLSLGRGLH 152
N+ +N ++ G + + + + F + L P+++T V SV +L++GR +H
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIH 275
Query: 153 CLIVKSGVEYDAFVRVHLADMYVQLGKTRGAFKVFDETPEKNKSESVLLWNVLINGCSKI 212
++K G+ D V + DMY + G G +F++ + N I G S+
Sbjct: 276 GYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAG----VCNAYITGLSRN 331
Query: 213 GYLRKAVELFGMMPKKNVASWVSLIDGFMRKGDLKKAGELF-EQMPEKGVVSWTAMINGF 271
G + KA+E+F ELF EQ E VVSWT++I G
Sbjct: 332 GLVDKALEMF----------------------------ELFKEQTMELNVVSWTSIIAGC 363
Query: 272 SQNGEAEKALAMFFQMLDAGVRANDFTVVSALSACAKVGALEAGVRVHNYISCNDFGLKG 331
+QNG+ +AL +F +M AGV+ N T+ S L AC + AL G H +
Sbjct: 364 AQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNV 423
Query: 332 AIGTALVDMYAKCGNIEAASLVFGETKEKDLLTWTAMIWGLAIHGRYEQAIQYFKKMMYS 391
+G+AL+DMYAKCG I + +VF K+L+ W +++ G ++HG+ ++ + F+ +M +
Sbjct: 424 HVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRT 483
Query: 392 GTEPDGTVFLAILTACWYSGQVKLALNFFDSMRFDYFIEPSVKHHTVVVNLLSRVGQDSQ 451
+PD F ++L+AC G +F M +Y I+P ++H++ +VNLL R G+ +
Sbjct: 484 RLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQE 543
Query: 452 GYQ------------------NS---QNSFT-------KLLQLKPKHPSSYVLLSNIYAA 483
Y NS QN+ KL L+P++P +YVLLSNIYAA
Sbjct: 544 AYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAA 603
Query: 484 EGRWKDVARVRTLMQRRSIKKDPGWSYIEVNGHVHRFEAG--GHKLAKEIHSKLEDIMAG 541
+G W +V +R M+ +KK+PG S+I+V V+ AG H +I K+++I
Sbjct: 604 KGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKE 663
Query: 542 AREQGYMPGTEWVLHNIKE-EKEEALGCHSEKLALAFGLIQTTPGTTIKIVKKLTICGDC 600
R+ G+ P ++ LH+++E E+E+ L HSEKLA+ FGL+ T GT ++++K L ICGDC
Sbjct: 664 MRKSGHRPNLDFALHDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDC 723
Query: 601 HSLMKYASKISQREIVLRDT-RFHYFKDGTCSCRDYW 636
H+++K+ S + REI +RDT RFH+FKDG CSC D+W
Sbjct: 724 HAVIKFISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760
Score = 122 bits (306), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 117/497 (23%), Positives = 216/497 (43%), Gaps = 57/497 (11%)
Query: 49 QIHAQIILHNLFASSRITTQLISSASLHKSIDYALSIFDHFTPKNLHIFNVLIRGLAENS 108
Q HA+I+ I+ +LI+S S + + A + ++ F+ LI L +
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 109 HFQSCISHFVFMLRLSVRPNRLTYPFVSKSVASLSLLSLGRGLHCLIVKSGVEYDAFVRV 168
F I F M + P+ P + K A LS +G+ +HC+ SG++ DAFV+
Sbjct: 96 LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQG 155
Query: 169 HLADMYVQLGKTRGAFKVFDETPEKNKSESVLLWNVLINGCSKIGYLRKAVELFGMMPKK 228
+ MY++ G+ A KVFD M K
Sbjct: 156 SMFHMYMRCGRMGDARKVFDR-----------------------------------MSDK 180
Query: 229 NVASWVSLIDGFMRKGDLKKAGELFEQMPEKG----VVSWTAMINGFSQNGEAEKALAMF 284
+V + +L+ + RKG L++ + +M G +VSW +++GF+++G ++A+ MF
Sbjct: 181 DVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMF 240
Query: 285 FQMLDAGVRANDFTVVSALSACAKVGALEAGVRVHNYISCNDFGLKGAIGTALVDMYAKC 344
++ G + TV S L + L G +H Y+ + +A++DMY K
Sbjct: 241 QKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKS 300
Query: 345 GNIEAASLVFGETKEKDLLTWTAMIWGLAIHGRYEQAIQYFKKMMYSGTEPDGTVFLAIL 404
G++ +F + + + A I GL+ +G ++A++ F+ E + + +I+
Sbjct: 301 GHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSII 360
Query: 405 TACWYSGQVKLALNFFDSMRFDYFIEPSVKHHTVVVNLLSRVGQ-DSQGYQNSQNSF-TK 462
C +G+ AL F M+ ++P +H + ++L G + G+ S + F +
Sbjct: 361 AGCAQNGKDIEALELFREMQV-AGVKP---NHVTIPSMLPACGNIAALGHGRSTHGFAVR 416
Query: 463 LLQLKPKHPSSYVLLSNIYAAEGRWKDVARVRTLMQRRSIKKDPGWSYIEVNGHVHRFEA 522
+ L H S ++ ++YA GR V +M +++ W+ + +NG
Sbjct: 417 VHLLDNVHVGSALI--DMYAKCGRINLSQIVFNMMPTKNLV---CWNSL-MNGF------ 464
Query: 523 GGHKLAKEIHSKLEDIM 539
H AKE+ S E +M
Sbjct: 465 SMHGKAKEVMSIFESLM 481
Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 115/253 (45%), Gaps = 19/253 (7%)
Query: 50 IHAQIILHNLFA--SSRITTQLISSASLHKSIDYALSIFDHFTPKNLHI----FNVLIRG 103
++ I L N F + + I+ S + +D AL +F+ F + + + + +I G
Sbjct: 303 VYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAG 362
Query: 104 LAENSHFQSCISHFVFMLRLSVRPNRLTYPFVSKSVASLSLLSLGRGLHCLIVKSGVEYD 163
A+N + F M V+PN +T P + + +++ L GR H V+ + +
Sbjct: 363 CAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDN 422
Query: 164 AFVRVHLADMYVQLGKTRGAFKVFDETPEKNKSESVLLWNVLINGCSKIGYLRKAVELFG 223
V L DMY + G+ + VF+ P KN ++ WN L+NG S G ++ + +F
Sbjct: 423 VHVGSALIDMYAKCGRINLSQIVFNMMPTKN----LVCWNSLMNGFSMHGKAKEVMSIFE 478
Query: 224 MMP----KKNVASWVSLIDGFMRKGDLKKAGELFEQMPEKGVVS-----WTAMINGFSQN 274
+ K + S+ SL+ + G + + F+ M E+ + ++ M+N +
Sbjct: 479 SLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRA 538
Query: 275 GEAEKALAMFFQM 287
G+ ++A + +M
Sbjct: 539 GKLQEAYDLIKEM 551
Score = 40.0 bits (92), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 44/234 (18%), Positives = 98/234 (41%), Gaps = 18/234 (7%)
Query: 48 RQIHAQIILHNLFASSRITTQLISSASLHKSIDYALSIFDHFTPKNLHIFNVLIRGLAEN 107
R H + +L + + + LI + I+ + +F+ KNL +N L+ G + +
Sbjct: 408 RSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMH 467
Query: 108 SHFQSCISHFVFMLRLSVRPNRLTYPFVSKSVASLSLLSLGRGLHCLIVKSGVEYDAFVR 167
+ +S F ++R ++P+ +++ + + + L G ++ + EY R
Sbjct: 468 GKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSE---EYGIKPR 524
Query: 168 VH----LADMYVQLGKTRGAFKVFDETPEKNKSESVLLWNVLINGC---SKIGYLRKAVE 220
+ + ++ + GK + A+ + E P + S +W L+N C + + A E
Sbjct: 525 LEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDS---CVWGALLNSCRLQNNVDLAEIAAE 581
Query: 221 LFGMMPKKNVASWVSLIDGFMRKGDLKKAGELFEQMPEKGV-----VSWTAMIN 269
+ +N ++V L + + KG + + +M G+ SW + N
Sbjct: 582 KLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKN 635
>sp|Q9LYV3|PP377_ARATH Putative pentatricopeptide repeat-containing protein At5g13230,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H89 PE=3
SV=1
Length = 822
Score = 330 bits (846), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 213/677 (31%), Positives = 336/677 (49%), Gaps = 76/677 (11%)
Query: 32 THIISLIHSSNSTKQLRQIHAQIILHNLFASSRITTQLISSASLHKSIDYALSIFDHFTP 91
T + L S + + +H+ I+ +++ + LI++ S+ S+D A ++F+
Sbjct: 150 TSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILC 209
Query: 92 KNLHIFNVLIRGLAENSHFQSCISHFVFMLRLSVRPNRLTYPFVSKSVASLSLLSLGRGL 151
K++ ++ ++ EN +F+ + M PN T+ K+ L +G+
Sbjct: 210 KDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGV 269
Query: 152 HCLIVKSGVEYDAFVRVHLADMYVQLGKTRGAFKVFDETPEKNKSESVLLWNVLINGCSK 211
H I+K+ D V V L +Y QLG AFKVF+E P+ + V+ W+ +I +
Sbjct: 270 HGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKND----VVPWSFMIARFCQ 325
Query: 212 IGYLRKAVELFGMM------PKKNVASWV------------------------------- 234
G+ +AV+LF M P + S +
Sbjct: 326 NGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYV 385
Query: 235 --SLIDGFMRKGDLKKAGELFEQMPEKGVVSWTAMINGFSQNGEAEKALAMFFQMLDAGV 292
+LID + + + A +LF ++ K VSW +I G+ GE KA +MF + L V
Sbjct: 386 SNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQV 445
Query: 293 RANDFTVVSALSACAKVGALEAGVRVHNYISCNDFGLKGAIGTALVDMYAKCGNIEAASL 352
+ T SAL ACA + +++ GV+VH + K A+ +L+DMYAKCG+I+ A
Sbjct: 446 SVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQS 505
Query: 353 VFGETKEKDLLTWTAMIWGLAIHGRYEQAIQYFKKMMYSGTEPDGTVFLAILTACWYSGQ 412
VF E + D+ +W A+I G + HG QA++ M +P+G FL +L+ C +G
Sbjct: 506 VFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGL 565
Query: 413 VKLALNFFDSMRFDYFIEPSVKHHTVVVNLLSRVGQDSQGY------------------- 453
+ F+SM D+ IEP ++H+T +V LL R GQ +
Sbjct: 566 IDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAML 625
Query: 454 -----QNSQN----SFTKLLQLKPKHPSSYVLLSNIYAAEGRWKDVARVRTLMQRRSIKK 504
QN++ S ++L++ PK ++YVL+SN+YA +W +VA +R M+ +KK
Sbjct: 626 SASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKK 685
Query: 505 DPGWSYIEVNGHVHRFEAG--GHKLAKEIHSKLEDIMAGAREQGYMPGTEWVLHNI-KEE 561
+PG S+IE G VH F G H K I+ LE + A GY+P VL ++ EE
Sbjct: 686 EPGLSWIEHQGDVHYFSVGLSDHPDMKLINGMLEWLNMKATRAGYVPDRNAVLLDMDDEE 745
Query: 562 KEEALGCHSEKLALAFGLIQ-TTPGTTIKIVKKLTICGDCHSLMKYASKISQREIVLRD- 619
K++ L HSE+LALA+GL++ + I I+K L IC DCHS MK S I QR++V+RD
Sbjct: 746 KDKRLWVHSERLALAYGLVRMPSSRNRILIMKNLRICSDCHSAMKVISSIVQRDLVIRDM 805
Query: 620 TRFHYFKDGTCSCRDYW 636
RFH+F G CSC D+W
Sbjct: 806 NRFHHFHAGVCSCGDHW 822
Score = 110 bits (274), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 120/516 (23%), Positives = 210/516 (40%), Gaps = 66/516 (12%)
Query: 42 NSTKQLRQIHAQII----LHNLFASSRITTQLISSASLHKSIDY-ALSIFDHFTPKNLHI 96
N + IH I+ +LFA T ++ +A + D AL++FD +N
Sbjct: 63 NDPISAKAIHCDILKKGSCLDLFA-----TNILLNAYVKAGFDKDALNLFDEMPERN--- 114
Query: 97 FNVLIRGLAENSHFQSCISHFVFMLRLSVRPNRLTYPFVSKSVASLSLLSLGRGLHCLIV 156
NV LA+ Q I + + R N + K SL + LH IV
Sbjct: 115 -NVSFVTLAQGYACQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIV 173
Query: 157 KSGVEYDAFVRVHLADMYVQLGKTRGAFKVFDETPEKNKSESVLLWNVLINGCSKIGYLR 216
K G + +AFV L + Y G A VF+ K+ +++W +++ + GY
Sbjct: 174 KLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKD----IVVWAGIVSCYVENGYFE 229
Query: 217 KAVELF------GMMPKK---------------------------------NVASWVSLI 237
+++L G MP + V L+
Sbjct: 230 DSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLL 289
Query: 238 DGFMRKGDLKKAGELFEQMPEKGVVSWTAMINGFSQNGEAEKALAMFFQMLDAGVRANDF 297
+ + GD+ A ++F +MP+ VV W+ MI F QNG +A+ +F +M +A V N+F
Sbjct: 290 QLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEF 349
Query: 298 TVVSALSACAKVGALEAGVRVHNYISCNDFGLKGAIGTALVDMYAKCGNIEAASLVFGET 357
T+ S L+ CA G ++H + F L + AL+D+YAKC ++ A +F E
Sbjct: 350 TLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAEL 409
Query: 358 KEKDLLTWTAMIWGLAIHGRYEQAIQYFKKMMYSGTEPDGTVFLAILTACWYSGQVKLAL 417
K+ ++W +I G G +A F++ + + F + L AC + L +
Sbjct: 410 SSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGV 469
Query: 418 NFFDSMRFDYFIEPSVKHHTVVVNLLSRVGQDSQGYQNSQNSFTKLLQLKPKHPSSYVLL 477
I+ + V N L + + +Q+ F +++ +S+ L
Sbjct: 470 QV-----HGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFN---EMETIDVASWNAL 521
Query: 478 SNIYAAEGRWKDVARVRTLMQRRSIKKDPGWSYIEV 513
+ Y+ G + R+ +M+ R K + G +++ V
Sbjct: 522 ISGYSTHGLGRQALRILDIMKDRDCKPN-GLTFLGV 556
Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/360 (22%), Positives = 136/360 (37%), Gaps = 74/360 (20%)
Query: 114 ISHFVFMLRLSVRPNRLTYPFVSKSVASLSLLSLGRGLHCLIVKSGVEYDAFVRVHLADM 173
I H RL +R NR+ S A+L L S + L + Y A +R
Sbjct: 7 IIHVAQTRRLMIRCNRIRQCGFSVKTAALDLESSDSIIPGLDSHA---YGAMLR-----R 58
Query: 174 YVQLGKTRGAFKVFDETPEKNKSESVLLWNVLINGCSKIGYLRKAVELFGMMPKKNVASW 233
+Q A + + +K + N+L+N K G+ + A+ LF MP++N S+
Sbjct: 59 CIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSF 118
Query: 234 VSLIDGFMRKGD------LKKAG------------ELFEQMPEKGVVSW----------- 264
V+L G+ + L + G +LF + + + W
Sbjct: 119 VTLAQGYACQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYD 178
Query: 265 ------TAMINGFS-------------------------------QNGEAEKALAMFFQM 287
A+IN +S +NG E +L + M
Sbjct: 179 SNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCM 238
Query: 288 LDAGVRANDFTVVSALSACAKVGALEAGVRVHNYISCNDFGLKGAIGTALVDMYAKCGNI 347
AG N++T +AL A +GA + VH I + L +G L+ +Y + G++
Sbjct: 239 RMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDM 298
Query: 348 EAASLVFGETKEKDLLTWTAMIWGLAIHGRYEQAIQYFKKMMYSGTEPDGTVFLAILTAC 407
A VF E + D++ W+ MI +G +A+ F +M + P+ +IL C
Sbjct: 299 SDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGC 358
>sp|O23266|PP308_ARATH Pentatricopeptide repeat-containing protein At4g14050,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H13 PE=2
SV=3
Length = 612
Score = 329 bits (844), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 201/641 (31%), Positives = 323/641 (50%), Gaps = 73/641 (11%)
Query: 33 HIISLIHSSNSTKQLRQIHAQIILHNLFASSRITTQLISSASLHKSIDYALSIFDHFTPK 92
H + L + + + +HA I+ + + L++ + +AL +FD P
Sbjct: 8 HQLQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEM-PH 66
Query: 93 NLHIF--NVLIRGLAENSHFQSCISHFVFMLRLSVRPNRLTYPFVSKSVASLSLLSLGRG 150
HI +VL N ++ +RP+ + + K+ A+L + GR
Sbjct: 67 RDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQ 126
Query: 151 LHCLIVKSGVEYDAFVRVHLADMYVQLGKTRGAFKVFDETPEKNKSESVLLWNVLINGCS 210
+HC + S D V+ L DMY +
Sbjct: 127 VHCHFIVSEYANDEVVKSSLVDMY-----------------------------------A 151
Query: 211 KIGYLRKAVELFGMMPKKNVASWVSLIDGFMRKGDLKKAGELFEQMPEKGVVSWTAMING 270
K G L A +F + KN SW +++ G+ + G ++A ELF +P K + SWTA+I+G
Sbjct: 152 KCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISG 211
Query: 271 FSQNGEAEKALAMFFQMLDAGVRANDFTVVSAL-SACAKVGALEAGVRVHNYISCNDFGL 329
F Q+G+ +A ++F +M V D V+S++ ACA + A AG +VH + F
Sbjct: 212 FVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDS 271
Query: 330 KGAIGTALVDMYAKCGNIEAASLVFGETKEKDLLTWTAMIWGLAIHGRYEQAIQYFKKMM 389
I AL+DMYAKC ++ AA +F + +D+++WT++I G+A HG+ E+A+ + M+
Sbjct: 272 CVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMV 331
Query: 390 YSGTEPDGTVFLAILTACWYSGQVKLALNFFDSMRFDYFIEPSVKHHTVVVNLLSRVGQD 449
G +P+ F+ ++ AC + G V+ F SM DY I PS++H+T +++LL R G
Sbjct: 332 SHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLL 391
Query: 450 SQG--------YQNSQNSFTKLLQ---------------------LKPKHPSSYVLLSNI 480
+ + + ++ LL K K PS+Y+LLSNI
Sbjct: 392 DEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNI 451
Query: 481 YAAEGRWKDVARVRTLMQRRSIKKDPGWSYIEVNGHVHRFEAG--GHKLAKEIHSKLEDI 538
YA+ W V+ R + ++KDPG S +EV F AG H L ++I L+ +
Sbjct: 452 YASASLWGKVSEARRKLGEMEVRKDPGHSSVEVRKETEVFYAGETSHPLKEDIFRLLKKL 511
Query: 539 MAGAR-EQGYMPGTEWVLHNIKE-EKEEALGCHSEKLALAFGLIQTTPGTTIKIVKKLTI 596
R GY+P T W+LH++ E EKE+ L HSE+ A+A+GL++ PGT I+IVK L +
Sbjct: 512 EEEMRIRNGYVPDTSWILHDMDEQEKEKLLFWHSERSAVAYGLLKAVPGTPIRIVKNLRV 571
Query: 597 CGDCHSLMKYASKISQREIVLRD-TRFHYFKDGTCSCRDYW 636
CGDCH ++K+ S+I++REI++RD TR+H+FK G CSC D+W
Sbjct: 572 CGDCHVVLKHISEITEREIIVRDATRYHHFKGGKCSCNDFW 612
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 327 bits (839), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 208/697 (29%), Positives = 344/697 (49%), Gaps = 104/697 (14%)
Query: 43 STKQLRQIHAQIILHNLFASSRITTQLISSASLHKSIDYALSIFDHFTPKNLHIFNVLIR 102
S Q +Q+HAQ I + + + +IS + K + AL +F + + +IR
Sbjct: 20 SKSQAKQLHAQFIRTQSLSHTSASI-VISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIR 78
Query: 103 GLAENSHFQSCISHFVFMLRLSVRPNRLTYPFVSKSVASLSLLSLGRGLHCLIVKSGVEY 162
+ S F ++ FV M P+ +P V KS + L G +H IV+ G++
Sbjct: 79 CFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDC 138
Query: 163 DAFVRVHLADMYVQL---GKTRGAFKVFDETPEKN--------KSESVLL---------- 201
D + L +MY +L G VFDE P++ K+E+ ++
Sbjct: 139 DLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRV 198
Query: 202 -----------WNVLINGCSKIGYLRKAV------------------------------- 219
+N +I G ++ G A+
Sbjct: 199 FEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDV 258
Query: 220 ----ELFGMMPKKNVASWV----SLIDGFMRKGDLKKAGELFEQMPEKGVVSWTAMINGF 271
E+ G + +K + S V SL+D + + ++ + +F ++ + +SW +++ G+
Sbjct: 259 IKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGY 318
Query: 272 SQNGEAEKALAMFFQMLDAGVRANDFTVVSALSACAKVGALEAGVRVHNYISCNDFGLKG 331
QNG +AL +F QM+ A V+ S + ACA + L G ++H Y+ FG
Sbjct: 319 VQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNI 378
Query: 332 AIGTALVDMYAKCGNIEAASLVFGETKEKDLLTWTAMIWGLAIHGRYEQAIQYFKKMMYS 391
I +ALVDMY+KCGNI+AA +F D ++WTA+I G A+HG +A+ F++M
Sbjct: 379 FIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQ 438
Query: 392 GTEPDGTVFLAILTACWYSGQVKLALNFFDSMRFDYFIEPSVKHHTVVVNLLSRVGQDSQ 451
G +P+ F+A+LTAC + G V A +F+SM Y + ++H+ V +LL R G+ +
Sbjct: 439 GVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEE 498
Query: 452 GY----------------------------QNSQNSFTKLLQLKPKHPSSYVLLSNIYAA 483
Y + ++ K+ + ++ +YVL+ N+YA+
Sbjct: 499 AYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYAS 558
Query: 484 EGRWKDVARVRTLMQRRSIKKDPGWSYIEVNGHVHRFEAG--GHKLAKEIHSKLEDIMAG 541
GRWK++A++R M+++ ++K P S+IE+ H F +G H +I+ L+ +M
Sbjct: 559 NGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQ 618
Query: 542 AREQGYMPGTEWVLHNIKEE-KEEALGCHSEKLALAFGLIQTTPGTTIKIVKKLTICGDC 600
++GY+ T VLH++ EE K E L HSE+LA+AFG+I T PGTTI++ K + IC DC
Sbjct: 619 MEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDC 678
Query: 601 HSLMKYASKISQREIVLRD-TRFHYFKDGTCSCRDYW 636
H +K+ SKI++REI++RD +RFH+F G CSC DYW
Sbjct: 679 HVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 325 bits (834), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 219/725 (30%), Positives = 342/725 (47%), Gaps = 115/725 (15%)
Query: 27 NNITETHIISLIHSSNSTKQLRQIHAQIILHNLFASSRITTQLISSASLHKSIDYALSIF 86
+N T + +S + HA ++ ++ + L++ S +S+ A +F
Sbjct: 126 DNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVF 185
Query: 87 DHFTPKNLHIFNVLIRGLAENSHFQSCISHFVFML-RLSVRPNRLTYPFVSKSVASLSLL 145
D + ++ +N +I A+ + + F M RP+ +T V ASL
Sbjct: 186 DEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTH 245
Query: 146 SLGRGLHCLIVKSGVEYDAFVRVHLADMYV------------------------------ 175
SLG+ LHC V S + + FV L DMY
Sbjct: 246 SLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGY 305
Query: 176 -QLGKTRGAFKVFDETPEKNKSESVLLWNVLINGCSKIGYLRKAVELFGMM----PKKNV 230
Q+G+ A ++F++ E+ V+ W+ I+G ++ G +A+ + M K N
Sbjct: 306 SQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNE 365
Query: 231 ASWVSLIDGFMRKG-----------------DLKKAGELFEQM----------------- 256
+ +S++ G G DL+K G E M
Sbjct: 366 VTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDT 425
Query: 257 ----------PEKGVVSWTAMINGFSQNGEAEKALAMFFQML--DAGVRANDFTVVSALS 304
E+ VV+WT MI G+SQ+G+A KAL + +M D R N FT+ AL
Sbjct: 426 ARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALV 485
Query: 305 ACAKVGALEAGVRVHNYISCND-FGLKGAIGTALVDMYAKCGNIEAASLVFGETKEKDLL 363
ACA + AL G ++H Y N + + L+DMYAKCG+I A LVF K+ +
Sbjct: 486 ACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEV 545
Query: 364 TWTAMIWGLAIHGRYEQAIQYFKKMMYSGTEPDGTVFLAILTACWYSGQVKLALNFFDSM 423
TWT+++ G +HG E+A+ F +M G + DG L +L AC +SG + + +F+ M
Sbjct: 546 TWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRM 605
Query: 424 RFDYFIEPSVKHHTVVVNLLSRVGQDSQGY----------------------------QN 455
+ + + P +H+ +V+LL R G+ + +
Sbjct: 606 KTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVEL 665
Query: 456 SQNSFTKLLQLKPKHPSSYVLLSNIYAAEGRWKDVARVRTLMQRRSIKKDPGWSYIEVNG 515
+ + K+ +L H SY LLSN+YA GRWKDV R+R+LM+ + +KK PG S++E
Sbjct: 666 GEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIK 725
Query: 516 HVHRFEAGG--HKLAKEIHSKLEDIMAGAREQGYMPGTEWVLHNI-KEEKEEALGCHSEK 572
F G H AKEI+ L D M ++ GY+P T + LH++ EEK++ L HSEK
Sbjct: 726 GTTTFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEK 785
Query: 573 LALAFGLIQTTPGTTIKIVKKLTICGDCHSLMKYASKISQREIVLRD-TRFHYFKDGTCS 631
LALA+G++ T G I+I K L +CGDCH+ Y S+I +I+LRD +RFH+FK+G+CS
Sbjct: 786 LALAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHDIILRDSSRFHHFKNGSCS 845
Query: 632 CRDYW 636
C+ YW
Sbjct: 846 CKGYW 850
Score = 162 bits (409), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 123/459 (26%), Positives = 195/459 (42%), Gaps = 93/459 (20%)
Query: 37 LIHSSNSTKQLRQIHAQIILHNLFASSRITTQLISSASLHKSIDYALSIFDHFTPKNLHI 96
IH + Q++ IH +++ + + +T+ LIS+ + +A+S+ F P + +
Sbjct: 34 FIHKCKTISQVKLIHQKLLSFGIL-TLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGV 92
Query: 97 F--NVLIRGLAENSHFQSCISHFVFMLRLSVRPNRLTYPFVSKSVASLSLLSLGRGLHCL 154
+ N LIR +N C+ F M LS P+ T+PFV K+ +S + G H L
Sbjct: 93 YHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHAL 152
Query: 155 IVKSGVEYDAFVRVHLADMYVQLGKTRGAFKVFDETPEKNKSESVLLWNVLINGCSKIGY 214
+ +G + FV L MY + A KVFDE + V+ WN +I +K+G
Sbjct: 153 SLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWD----VVSWNSIIESYAKLGK 208
Query: 215 LRKAVELFGMMPK----------------------------------------KNVASWV 234
+ A+E+F M +N+
Sbjct: 209 PKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGN 268
Query: 235 SLIDGFMRKGDLKKAGELFEQMPEKGVVSWTAMINGFSQNGEAEKALAMF---------- 284
L+D + + G + +A +F M K VVSW AM+ G+SQ G E A+ +F
Sbjct: 269 CLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKM 328
Query: 285 -------------------------FQMLDAGVRANDFTVVSALSACAKVGALEAGVRVH 319
QML +G++ N+ T++S LS CA VGAL G +H
Sbjct: 329 DVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIH 388
Query: 320 NY-------ISCNDFGLKGAIGTALVDMYAKCGNIEAASLVFG--ETKEKDLLTWTAMIW 370
Y + N G + + L+DMYAKC ++ A +F KE+D++TWT MI
Sbjct: 389 CYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIG 448
Query: 371 GLAIHGRYEQAIQYFKKMMYSG--TEPDGTVFLAILTAC 407
G + HG +A++ +M T P+ L AC
Sbjct: 449 GYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVAC 487
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 129/301 (42%), Gaps = 26/301 (8%)
Query: 236 LIDGFMRKGDLKKAGELFEQMP--EKGVVSWTAMINGFSQNGEAEKALAMFFQMLDAGVR 293
LI ++ G L A L + P + GV W ++I + NG A K L +F M
Sbjct: 65 LISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWT 124
Query: 294 ANDFTVVSALSACAKVGALEAGVRVHNYISCNDFGLKGAIGTALVDMYAKCGNIEAASLV 353
+++T AC ++ ++ G H F +G ALV MY++C ++ A V
Sbjct: 125 PDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKV 184
Query: 354 FGETKEKDLLTWTAMIWGLAIHGRYEQAIQYFKKMMYS-GTEPDGTVFLAILTACWYSGQ 412
F E D+++W ++I A G+ + A++ F +M G PD + +L C G
Sbjct: 185 FDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGT 244
Query: 413 VKLA--LNFF---DSMRFDYFIEPSVKHHTVVVNLLSRVGQDSQGYQNSQNSFTKLLQLK 467
L L+ F M + F+ +V++ ++ G + + T +
Sbjct: 245 HSLGKQLHCFAVTSEMIQNMFVG------NCLVDMYAKCGMMDE-------ANTVFSNMS 291
Query: 468 PKHPSSYVLLSNIYAAEGRWKDVARVRTLMQRRSIKKD-PGWSYIEVNGHVHR---FEAG 523
K S+ + Y+ GR++D R+ MQ IK D WS ++G+ R +EA
Sbjct: 292 VKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWS-AAISGYAQRGLGYEAL 350
Query: 524 G 524
G
Sbjct: 351 G 351
Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 124/311 (39%), Gaps = 54/311 (17%)
Query: 19 IKSSHKPSNNITETHIISLIHSSNSTKQLRQIHAQIILHNL-------FASSRITTQLIS 71
+ S KP N +T ++S S + ++IH I + + + + QLI
Sbjct: 357 LSSGIKP-NEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLID 415
Query: 72 SASLHKSIDYALSIFDHFTPKNLHI--FNVLIRGLAENSHFQSCISHFVFMLR--LSVRP 127
+ K +D A ++FD +PK + + V+I G +++ + M RP
Sbjct: 416 MYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRP 475
Query: 128 NRLTYPFVSKSVASLSLLSLGRGLHCLIVKSGVE-YDAFVRVHLADMYVQLGKTRGAFKV 186
N T + ASL+ L +G+ +H +++ FV L DMY + G A V
Sbjct: 476 NAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLV 535
Query: 187 FDETPEKNK----------------SESVLLWN---------------VLINGCSKIGYL 215
FD KN+ E++ +++ V++ CS G +
Sbjct: 536 FDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMI 595
Query: 216 RKAVE-------LFGMMPKKNVASWVSLIDGFMRKGDLKKAGELFEQMP-EKGVVSWTAM 267
+ +E +FG+ P + L+D R G L A L E+MP E V W A
Sbjct: 596 DQGMEYFNRMKTVFGVSPGPE--HYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAF 653
Query: 268 INGFSQNGEAE 278
++ +G+ E
Sbjct: 654 LSCCRIHGKVE 664
>sp|Q9FND6|PP411_ARATH Pentatricopeptide repeat-containing protein At5g40410,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H15 PE=2
SV=1
Length = 608
Score = 325 bits (834), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 201/573 (35%), Positives = 299/573 (52%), Gaps = 78/573 (13%)
Query: 138 SVASLSLLSLGRGLHCLIVKSGVEYDAFVRVHLADMYVQLGKTRGAFKVFDETPEKNKSE 197
+V S + L R LHC +VKS F+ L Y++LG A K+FDE PE++
Sbjct: 40 AVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPERD--- 96
Query: 198 SVLLWNVLINGCSKIGYLRKAVELF----------------------------------- 222
++ WN LI+G S GYL K E+
Sbjct: 97 -LVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRC 155
Query: 223 --GMMPKKNVASWVSLIDGFM----RKGDLKKAGELFEQMPEKGVVSWTAMINGFSQNGE 276
G++ K V V +++ F+ + GDL + +LFE + K +VSW MI QNG
Sbjct: 156 IHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGL 215
Query: 277 AEKALAMFFQMLDAGVRANDFTVVSALSACAKVGALEAGVRVHNYISCNDFGLKGAIGTA 336
AEK LA F G + T ++ L +C +G + +H I F I TA
Sbjct: 216 AEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTA 275
Query: 337 LVDMYAKCGNIEAASLVFGETKEKDLLTWTAMIWGLAIHGRYEQAIQYFKKMMYSGTEPD 396
L+D+Y+K G +E +S VF E D + WTAM+ A HG AI++F+ M++ G PD
Sbjct: 276 LLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPD 335
Query: 397 GTVFLAILTACWYSGQVKLALNFFDSMRFDYFIEPSVKHHTVVVNLLSRVG--QDSQG-- 452
F +L AC +SG V+ ++F++M Y I+P + H++ +V+LL R G QD+ G
Sbjct: 336 HVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLI 395
Query: 453 ---------------------YQNSQ---NSFTKLLQLKPKHPSSYVLLSNIYAAEGRWK 488
Y+++Q + +L +L+P+ +YV+LSNIY+A G WK
Sbjct: 396 KEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSASGLWK 455
Query: 489 DVARVRTLMQRRSIKKDPGWSYIEVNGHVHRFEAG--GHKLAKEIHSKLEDIMAGAR-EQ 545
D +R+R LM+++ + + G SYIE +H+F G H +++I KL++I + E
Sbjct: 456 DASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEIRKKMKSEM 515
Query: 546 GYMPGTEWVLHNIKEE-KEEALGCHSEKLALAFGLIQTTPGTTIKIVKKLTICGDCHSLM 604
GY TE+VLH++ E+ KEE + HSEK+A+AFGL+ +P I I K L ICGDCH
Sbjct: 516 GYKSKTEFVLHDVGEDVKEEMINQHSEKIAMAFGLLVVSPMEPIIIRKNLRICGDCHETA 575
Query: 605 KYASKISQREIVLRDT-RFHYFKDGTCSCRDYW 636
K S I +R I++RD+ RFH+F DG+CSC DYW
Sbjct: 576 KAISLIEKRRIIIRDSKRFHHFLDGSCSCSDYW 608
Score = 67.0 bits (162), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/270 (19%), Positives = 120/270 (44%), Gaps = 13/270 (4%)
Query: 27 NNITETHIISLIHSSNSTKQLRQIHAQIILHNLFASSRITTQLISSASLHKSIDYALSIF 86
N +T +IS S ++ R IH ++ + ++ I+ + + +F
Sbjct: 133 NEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLF 192
Query: 87 DHFTPKNLHIFNVLIRGLAENSHFQSCISHFVFMLRLSVRPNRLTYPFVSKSVASLSLLS 146
+ + KNL +N +I +N + +++F R+ P++ T+ V +S + ++
Sbjct: 193 EDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVR 252
Query: 147 LGRGLHCLIVKSGVEYDAFVRVHLADMYVQLGKTRGAFKVFDETPEKNKSESVLLWNVLI 206
L +G+H LI+ G + + L D+Y +LG+ + VF E S + W ++
Sbjct: 253 LAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEIT----SPDSMAWTAML 308
Query: 207 NGCSKIGYLRKAVELFGMMPKKNVA----SWVSLIDGFMRKGDLKKAGELFEQMPEKGVV 262
+ G+ R A++ F +M ++ ++ L++ G +++ FE M ++ +
Sbjct: 309 AAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRI 368
Query: 263 S-----WTAMINGFSQNGEAEKALAMFFQM 287
++ M++ ++G + A + +M
Sbjct: 369 DPRLDHYSCMVDLLGRSGLLQDAYGLIKEM 398
Score = 56.6 bits (135), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 65/130 (50%), Gaps = 9/130 (6%)
Query: 284 FFQMLDAGVRANDFTVVSALSACAKVGALEAGVRVHNYISCNDFGLKGAIGTALVDMYAK 343
F LDA V ++++A+ +C ++E +H + + G IG LV Y +
Sbjct: 26 FVHSLDANVS----SLIAAVKSCV---SIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLR 78
Query: 344 CGNIEAASLVFGETKEKDLLTWTAMIWGLAIHGRYEQAIQYFKKMMYS--GTEPDGTVFL 401
G+ A +F E E+DL++W ++I G + G + + +MM S G P+ FL
Sbjct: 79 LGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFL 138
Query: 402 AILTACWYSG 411
++++AC Y G
Sbjct: 139 SMISACVYGG 148
>sp|Q9FXB9|PPR84_ARATH Pentatricopeptide repeat-containing protein At1g56690,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H69 PE=2
SV=1
Length = 704
Score = 325 bits (833), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 210/668 (31%), Positives = 339/668 (50%), Gaps = 82/668 (12%)
Query: 34 IISLIHSSNSTKQLRQIHAQIILHNLFASSRITTQLISSASLHKSIDYALSIFDHFTPKN 93
I+S S+ K+ RQ+ ++ N+ + + L+S ++ I A ++F+ +N
Sbjct: 54 IVSGYFSNGLPKEARQLFDEMSERNVVSWN----GLVSGYIKNRMIVEARNVFELMPERN 109
Query: 94 LHIFNVLIRGLAENSHFQSCISHFVFMLRLSVRPNRLTYPFVSKSVASLSLLSLGRGLHC 153
+ + +++G + S F R+ R N +++ + + + R L+
Sbjct: 110 VVSWTAMVKGYMQEGMVGEAESLF---WRMPER-NEVSWTVMFGGLIDDGRIDKARKLYD 165
Query: 154 LI-VKSGVEYDAFVRVHLADMYVQLGKTRGAFKVFDETPEKNKSESVLLWNVLINGCSKI 212
++ VK D ++ + G+ A +FDE E+N V+ W +I G +
Sbjct: 166 MMPVK-----DVVASTNMIGGLCREGRVDEARLIFDEMRERN----VVTWTTMITGYRQN 216
Query: 213 GYLRKAVELFGMMPKKNVASWVSLIDGFMRKGDLKKAGELFEQMPEKGVVSWTAMINGFS 272
+ A +LF +MP+K SW S++ G+ G ++ A E FE MP K V++ AMI GF
Sbjct: 217 NRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFG 276
Query: 273 QNGEAEKA-------------------------------LAMFFQMLDAGVRANDFTVVS 301
+ GE KA L +F QM GVR + +++S
Sbjct: 277 EVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLIS 336
Query: 302 ALSACAKVGALEAGVRVHNYISCNDFGLKGAIGTALVDMYAKCGNIEAASLVFGETKEKD 361
LS CA + +L+ G +VH ++ F + + L+ MY KCG + A LVF KD
Sbjct: 337 ILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKD 396
Query: 362 LLTWTAMIWGLAIHGRYEQAIQYFKKMMYSGTEPDGTVFLAILTACWYSGQVKLALNFFD 421
++ W ++I G A HG E+A++ F +M SGT P+ +AILTAC Y+G+++ L F+
Sbjct: 397 IIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFE 456
Query: 422 SMRFDYFIEPSVKHHTVVVNLLSRVGQDSQGYQN-------------------------- 455
SM + + P+V+H++ V++L R GQ + +
Sbjct: 457 SMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRL 516
Query: 456 --SQNSFTKLLQLKPKHPSSYVLLSNIYAAEGRWKDVARVRTLMQRRSIKKDPGWSYIEV 513
++ + KL + +P + +YVLLS+I A+ +W DVA VR M+ ++ K PG S+IEV
Sbjct: 517 DLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEV 576
Query: 514 NGHVHRFEAGGHKLAKE---IHSKLEDIMAGAREQGYMPGTEWVLHNI-KEEKEEALGCH 569
VH F GG K E I LE RE GY P VLH++ +EEK ++L H
Sbjct: 577 GKKVHMFTRGGIKNHPEQAMILMMLEKTDGLLREAGYSPDCSHVLHDVDEEEKVDSLSRH 636
Query: 570 SEKLALAFGLIQTTPGTTIKIVKKLTICGDCHSLMKYASKISQREIVLRD-TRFHYFKDG 628
SE+LA+A+GL++ G I+++K L +CGDCH+ +K SK+++REI+LRD RFH+F +G
Sbjct: 637 SERLAVAYGLLKLPEGVPIRVMKNLRVCGDCHAAIKLISKVTEREIILRDANRFHHFNNG 696
Query: 629 TCSCRDYW 636
CSCRDYW
Sbjct: 697 ECSCRDYW 704
Score = 109 bits (272), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 141/277 (50%), Gaps = 21/277 (7%)
Query: 176 QLGKTRGAFKVFDETPEKNKSESVLLWNVLINGCSKIGYLRKAVELFGMMPKKNVASWVS 235
++GK A K FD K ++ WN +++G G ++A +LF M ++NV SW
Sbjct: 29 RIGKINEARKFFDSLQFK----AIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWNG 84
Query: 236 LIDGFMRKGDLKKAGELFEQMPEKGVVSWTAMINGFSQNGEAEKALAMFFQMLDAGVRAN 295
L+ G+++ + +A +FE MPE+ VVSWTAM+ G+ Q G +A ++F++M + N
Sbjct: 85 LVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPE----RN 140
Query: 296 DFTVVSALSACAKVGALEAGVRVHNYISCNDFGLKGAIGTALVDMYAKCGNIEAASLVFG 355
+ + G ++ ++++ + D T ++ + G ++ A L+F
Sbjct: 141 EVSWTVMFGGLIDDGRIDKARKLYDMMPVKDV----VASTNMIGGLCREGRVDEARLIFD 196
Query: 356 ETKEKDLLTWTAMIWGLAIHGRYEQAIQYFKKMMYSGTEPDGTVFLAILTACWYSGQVKL 415
E +E++++TWT MI G + R + A + F ++M TE T L T SG+++
Sbjct: 197 EMRERNVVTWTTMITGYRQNNRVDVARKLF-EVMPEKTEVSWTSMLLGYT---LSGRIED 252
Query: 416 ALNFFDSMRFDYFIEPSVKHHTVVVNLLSRVGQDSQG 452
A FF+ M ++P + + ++V VG+ S+
Sbjct: 253 AEEFFEVMP----MKPVIACNAMIVG-FGEVGEISKA 284
>sp|P93011|PP182_ARATH Pentatricopeptide repeat-containing protein At2g33760
OS=Arabidopsis thaliana GN=PCMP-H6 PE=3 SV=1
Length = 583
Score = 324 bits (830), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 207/642 (32%), Positives = 331/642 (51%), Gaps = 113/642 (17%)
Query: 36 SLIHSSNSTKQLRQIHAQIILHNLFASSRITTQLISSASLHKSIDYALSIFDHFTPKNLH 95
+++ + KQL+Q+HA +I+ S + T+LI+ A ++I Y
Sbjct: 14 AIVRAGPRVKQLQQVHAHLIVTGYGRSRSLLTKLITLACSARAIAY-------------- 59
Query: 96 IFNVLIRGLAENSHFQSCISHFVFMLRLSVR-PNRLTYPFVSKSVASLSLLSLGRGLHCL 154
+H +F LSV P+ + V KS + L L LHC+
Sbjct: 60 -------------------THLLF---LSVPLPDDFLFNSVIKSTSKLRL-----PLHCV 92
Query: 155 IVKSGVEYDAFVRVHLADMYVQLGKTRGAFKVFDETPEKNKSESVLLWNVLINGCSKIGY 214
A+ R L+ N S S + +I C+ +
Sbjct: 93 ---------AYYRRMLS---------------------SNVSPSNYTFTSVIKSCADLSA 122
Query: 215 LR--KAVELFGMMPKKNVASWV--SLIDGFMRKGDLKKAGELFEQMPEKGVVSWTAMING 270
LR K V ++ + ++V +L+ + + GD++ A ++F++MPEK +V+W ++++G
Sbjct: 123 LRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSG 182
Query: 271 FSQNGEAEKALAMFFQMLDAGVRANDFTVVSALSACAKVGALEAGVRVHNYISCNDFGLK 330
F QNG A++A+ +F+QM ++G + T VS LSACA+ GA+ G VH YI L
Sbjct: 183 FEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLN 242
Query: 331 GAIGTALVDMYAKCGNIEAASLVFGETKEKDLLTWTAMIWGLAIHGRYEQAIQYFKKMMY 390
+GTAL+++Y++CG++ A VF + KE ++ WTAMI HG +QA++ F KM
Sbjct: 243 VKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMED 302
Query: 391 S-GTEPDGTVFLAILTACWYSGQVKLALNFFDSMRFDYFIEPSVKHHTVVVNLLSRVG-- 447
G P+ F+A+L+AC ++G V+ + + M Y + P V+HH +V++L R G
Sbjct: 303 DCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFL 362
Query: 448 ---------QDSQGYQNSQNSFT--------------------KLLQLKPKHPSSYVLLS 478
D+ G + +T +L+ L+P +P +V+LS
Sbjct: 363 DEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLS 422
Query: 479 NIYAAEGRWKDVARVRTLMQRRSIKKDPGWSYIEVNGHVHRFEAG--GHKLAKEIHSKLE 536
NIYA G+ +V+ +R M R +++K G+S IEV + F G H+ EI+ LE
Sbjct: 423 NIYALSGKTDEVSHIRDGMMRNNLRKQVGYSVIEVENKTYMFSMGDESHQETGEIYRYLE 482
Query: 537 DIMAGAREQGYMPGTEWVLHNIKEEKEE-ALGCHSEKLALAFGLIQTTPGTTIKIVKKLT 595
+++ +E GY P +E V+H ++EE++E AL HSEKLA+AFGL++T I IVK L
Sbjct: 483 TLISRCKEIGYAPVSEEVMHQVEEEEKEFALRYHSEKLAVAFGLLKTVD-VAITIVKNLR 541
Query: 596 ICGDCHSLMKYASKISQREIVLRDT-RFHYFKDGTCSCRDYW 636
IC DCHS KY S +S R+I +RD RFH+F++G+CSC DYW
Sbjct: 542 ICEDCHSAFKYISIVSNRQITVRDKLRFHHFQNGSCSCLDYW 583
Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 135/309 (43%), Gaps = 16/309 (5%)
Query: 21 SSHKPSNNITETHIISLIHSSNSTKQLRQIHAQIILHNLFASSRITTQLISSASLHKSID 80
SS+ +N T T +I ++ + + +H ++ + + L++ S ++
Sbjct: 100 SSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDME 159
Query: 81 YALSIFDHFTPKNLHIFNVLIRGLAENSHFQSCISHFVFMLRLSVRPNRLTYPFVSKSVA 140
A +FD K++ +N L+ G +N I F M P+ T+ + + A
Sbjct: 160 GARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACA 219
Query: 141 SLSLLSLGRGLHCLIVKSGVEYDAFVRVHLADMYVQLGKTRGAFKVFDETPEKNKSESVL 200
+SLG +H I+ G++ + + L ++Y + G A +VFD+ E N V
Sbjct: 220 QTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETN----VA 275
Query: 201 LWNVLINGCSKIGYLRKAVELFGMM-----PKKNVASWVSLIDGFMRKGDLKKAGELFEQ 255
W +I+ GY ++AVELF M P N ++V+++ G +++ ++++
Sbjct: 276 AWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKR 335
Query: 256 MPEK-----GVVSWTAMINGFSQNGEAEKALAMFFQMLDAGVRANDFTVVSA-LSACAKV 309
M + GV M++ + G ++A F LDA +A + +A L AC
Sbjct: 336 MTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYK-FIHQLDATGKATAPALWTAMLGACKMH 394
Query: 310 GALEAGVRV 318
+ GV +
Sbjct: 395 RNYDLGVEI 403
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 323 bits (829), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 197/618 (31%), Positives = 328/618 (53%), Gaps = 74/618 (11%)
Query: 60 FASSRITTQLISS----ASLHKSI---DYALSIFDHFTPKNLHIFNVLIRGLAENSHFQS 112
F R+ + ISS +LH + D A++ F+ +++ +N +I G + +
Sbjct: 202 FVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLR 261
Query: 113 CISHFVFMLRLSV-RPNRLTYPFVSKSVASLSLLSLGRGLHCLIVKSGVEYDAFVRVHLA 171
+ F MLR S+ P+R T V + A+L L +G+ +H IV +G + V L
Sbjct: 262 ALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALI 321
Query: 172 DMYVQLGKTRGAFKVFDETPEKNKSESVLLWNVLINGCSKIGYLRKAVELFGMMPKKNVA 231
MY + G A ++ ++ K+ +
Sbjct: 322 SMYSRCGGVETARRLIEQRGTKDL---------------------------------KIE 348
Query: 232 SWVSLIDGFMRKGDLKKAGELFEQMPEKGVVSWTAMINGFSQNGEAEKALAMFFQMLDAG 291
+ +L+DG+++ GD+ +A +F + ++ VV+WTAMI G+ Q+G +A+ +F M+ G
Sbjct: 349 GFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGG 408
Query: 292 VRANDFTVVSALSACAKVGALEAGVRVHNYISCNDFGLKGAIGTALVDMYAKCGNIEAAS 351
R N +T+ + LS + + +L G ++H + ++ AL+ MYAK GNI +AS
Sbjct: 409 QRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSAS 468
Query: 352 LVFGETK-EKDLLTWTAMIWGLAIHGRYEQAIQYFKKMMYSGTEPDGTVFLAILTACWYS 410
F + E+D ++WT+MI LA HG E+A++ F+ M+ G PD ++ + +AC ++
Sbjct: 469 RAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHA 528
Query: 411 GQVKLALNFFDSMRFDYFIEPSVKHHTVVVNLLSRVG--QDSQGYQN------------- 455
G V +FD M+ I P++ H+ +V+L R G Q++Q +
Sbjct: 529 GLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGS 588
Query: 456 -------------SQNSFTKLLQLKPKHPSSYVLLSNIYAAEGRWKDVARVRTLMQRRSI 502
+ + +LL L+P++ +Y L+N+Y+A G+W++ A++R M+ +
Sbjct: 589 LLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRV 648
Query: 503 KKDPGWSYIEVNGHVHRF--EAGGHKLAKEIHSKLEDIMAGAREQGYMPGTEWVLHNIKE 560
KK+ G+S+IEV VH F E G H EI+ ++ I ++ GY+P T VLH+++E
Sbjct: 649 KKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEE 708
Query: 561 E-KEEALGCHSEKLALAFGLIQTTPGTTIKIVKKLTICGDCHSLMKYASKISQREIVLRD 619
E KE+ L HSEKLA+AFGLI T TT++I+K L +C DCH+ +K+ SK+ REI++RD
Sbjct: 709 EVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRD 768
Query: 620 -TRFHYFKDGTCSCRDYW 636
TRFH+FKDG CSCRDYW
Sbjct: 769 TTRFHHFKDGFCSCRDYW 786
Score = 132 bits (332), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 98/347 (28%), Positives = 173/347 (49%), Gaps = 26/347 (7%)
Query: 198 SVLLWNVLINGCSKIGYLRKAVELFGMMPKKNVASWVSLIDGFMRKGDLKKAGELFEQMP 257
SV L N L+N SK GY A +LF MP + SW +++ + ++GD+ E F+Q+P
Sbjct: 48 SVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLP 107
Query: 258 EKGVVSWTAMINGFSQNGEAEKALAMFFQMLDAGVRANDFTVVSALSACAKVGALEAGVR 317
++ VSWT MI G+ G+ KA+ + M+ G+ FT+ + L++ A +E G +
Sbjct: 108 QRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKK 167
Query: 318 VHNYISCNDFGLKG--AIGTALVDMYAKCGNIEAASLVFGETKEKDLLTWTAMIWGLAIH 375
VH++I GL+G ++ +L++MYAKCG+ A VF +D+ +W AMI A+H
Sbjct: 168 VHSFIV--KLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMI---ALH 222
Query: 376 ---GRYEQAIQYFKKMMYSGTEPDGTVFLAILTACWYSGQVKLALNFFDSMRFDYFIEPS 432
G+ + A+ F++M E D + ++++ G AL+ F M D + P
Sbjct: 223 MQVGQMDLAMAQFEQM----AERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPD 278
Query: 433 VKHHTVVVNLLSRVGQDSQGYQNSQNSFTKLLQLKPKHPSSYVLLSNIYAAEGRWKDVAR 492
V++ + + + G Q + T + S ++L+ + + R V
Sbjct: 279 RFTLASVLSACANLEKLCIGKQIHSHIVTTGFDI------SGIVLNALISMYSRCGGVET 332
Query: 493 VRTLMQRRSIK--KDPGWSYIEVNGHVHRFEAGGHKLAKEIHSKLED 537
R L+++R K K G++ + ++G++ + G AK I L+D
Sbjct: 333 ARRLIEQRGTKDLKIEGFTAL-LDGYI---KLGDMNQAKNIFVSLKD 375
Score = 126 bits (316), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 92/369 (24%), Positives = 155/369 (42%), Gaps = 69/369 (18%)
Query: 69 LISSASLHKSIDYALSIFDHFTPKNLHIFNVLIRGLAENSHFQSCISHFVFMLRLSVRPN 128
++S+ S +D FD ++ + +I G + I M++ + P
Sbjct: 86 VLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPT 145
Query: 129 RLTYPFVSKSVASLSLLSLGRGLHCLIVKSGVEYDAFVRVHLADMYVQLGKTRGAFKVFD 188
+ T V SVA+ + G+ +H IVK G+ + V L +MY + G A VFD
Sbjct: 146 QFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFD 205
Query: 189 ETPEKNKSESVLLWNVLINGCSKIGYLRKAVELFGMMPKKNVASWVSLIDGFMRKGDLKK 248
++ S WN +I ++G + A+ F M ++++ +W S+I GF
Sbjct: 206 RMVVRDISS----WNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGF-------- 253
Query: 249 AGELFEQMPEKGVVSWTAMINGFSQNGEAEKALAMFFQML-DAGVRANDFTVVSALSACA 307
+Q G +AL +F +ML D+ + + FT+ S LSACA
Sbjct: 254 -----------------------NQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACA 290
Query: 308 KVGALEAGVRVHNYISCNDFGLKGAIGTALVDMYAKCGNIEAASL--------------- 352
+ L G ++H++I F + G + AL+ MY++CG +E A
Sbjct: 291 NLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGF 350
Query: 353 ------------------VFGETKEKDLLTWTAMIWGLAIHGRYEQAIQYFKKMMYSGTE 394
+F K++D++ WTAMI G HG Y +AI F+ M+ G
Sbjct: 351 TALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQR 410
Query: 395 PDGTVFLAI 403
P+ A+
Sbjct: 411 PNSYTLAAM 419
Score = 38.5 bits (88), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 92/219 (42%), Gaps = 8/219 (3%)
Query: 48 RQIHAQIILHNLFASSRITTQLISSASLHKSIDYALSIFDHF-TPKNLHIFNVLIRGLAE 106
+QIH + S ++ LI+ + +I A FD ++ + +I LA+
Sbjct: 433 KQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQ 492
Query: 107 NSHFQSCISHFVFMLRLSVRPNRLTYPFVSKSVASLSLLSLGRGLHCLIVKSGVEYDAFV 166
+ H + + F ML +RP+ +TY V + L++ GR ++ V+
Sbjct: 493 HGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMM--KDVDKIIPT 550
Query: 167 RVHLADMYVQLGKTRGAFKVFDETPEKNKSE-SVLLWNVLINGC---SKIGYLRKAVELF 222
H A M G+ G + E EK E V+ W L++ C I + A E
Sbjct: 551 LSHYACMVDLFGRA-GLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERL 609
Query: 223 GMMPKKNVASWVSLIDGFMRKGDLKKAGELFEQMPEKGV 261
++ +N ++ +L + + G ++A ++ + M + V
Sbjct: 610 LLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRV 648
>sp|Q9LW32|PP258_ARATH Pentatricopeptide repeat-containing protein At3g26782,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2
SV=1
Length = 659
Score = 319 bits (818), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 200/634 (31%), Positives = 322/634 (50%), Gaps = 85/634 (13%)
Query: 84 SIFDHFTPK-NLHIFNVLIRGLAENSHFQSCISHFVFMLRLSVRPNRLTYPFVSKSVASL 142
++F+ + K ++ +N +I LA + + F M +LS+ P R ++P K+ +SL
Sbjct: 30 TLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSL 89
Query: 143 SLLSLGRGLHCLIVKSGVEYDAFVRVHLADMYVQLGKTRGAFKVFDETPEKNKSESVLLW 202
+ G+ H G + D FV L MY GK A KVFDE P++N ++ W
Sbjct: 90 FDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRN----IVSW 145
Query: 203 NVLINGCSKIGYLRKAVELF----------------------------GMMPKKNVASWV 234
+I G G AV LF +P K + +
Sbjct: 146 TSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESI 205
Query: 235 -----------------SLIDGFMRKGD--LKKAGELFEQMPEKGVVSWTAMINGFSQNG 275
+L+D + + G+ + A ++F+Q+ +K VS+ ++++ ++Q+G
Sbjct: 206 HSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSG 265
Query: 276 EAEKALAMFFQML-DAGVRANDFTVVSALSACAKVGALEAGVRVHNYISCNDFGLKGAIG 334
+ +A +F +++ + V N T+ + L A + GAL G +H+ + +G
Sbjct: 266 MSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVG 325
Query: 335 TALVDMYAKCGNIEAASLVFGETKEKDLLTWTAMIWGLAIHGRYEQAIQYFKKMMYSGTE 394
T+++DMY KCG +E A F K K++ +WTAMI G +HG +A++ F M+ SG
Sbjct: 326 TSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVR 385
Query: 395 PDGTVFLAILTACWYSGQVKLALNFFDSMRFDYFIEPSVKHHTVVVNLLSRVGQDSQGYQ 454
P+ F+++L AC ++G +F++M+ + +EP ++H+ +V+LL R G + Y
Sbjct: 386 PNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYD 445
Query: 455 NSQN----------------------------SFTKLLQLKPKHPSSYVLLSNIYAAEGR 486
Q S +L +L + Y+LLS+IYA GR
Sbjct: 446 LIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGR 505
Query: 487 WKDVARVRTLMQRRSIKKDPGWSYIEVNGHVHRFEAGG--HKLAKEIHSKLEDIMAGARE 544
WKDV RVR +M+ R + K PG+S +E+NG VH F G H ++I+ L ++ E
Sbjct: 506 WKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLE 565
Query: 545 QGYMPGTEWVLHNI-KEEKEEALGCHSEKLALAFGLIQTTPGTTIKIVKKLTICGDCHSL 603
GY+ T V H++ +EEKE L HSEKLA+AFG++ T PG+T+ +VK L +C DCH++
Sbjct: 566 AGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNV 625
Query: 604 MKYASKISQREIVLRDT-RFHYFKDGTCSCRDYW 636
+K SKI RE V+RD RFH+FKDG CSC DYW
Sbjct: 626 IKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 99.8 bits (247), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 95/388 (24%), Positives = 168/388 (43%), Gaps = 62/388 (15%)
Query: 48 RQIHAQIILHNLFASSRITTQLISSASLHKSIDYALSIFDHFTPKNLHIFNVLIRGLAEN 107
+Q H Q + + +++ LI S ++ A +FD +N+ + +IRG N
Sbjct: 96 KQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLN 155
Query: 108 SHFQSCISHFVFMLRLSVRPNRLTYPFVSKSVASLSLLS---------LGRGLHCLIVKS 158
+ +S F +L V N S+ +S++S L +H ++K
Sbjct: 156 GNALDAVSLFKDLL---VDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKR 212
Query: 159 GVEYDAFVRVHLADMYVQLGK--TRGAFKVFDETPEKNKSESVLLWNVLINGCSKIGYLR 216
G + V L D Y + G+ A K+FD+ +K++ + +N +++ ++ G
Sbjct: 213 GFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDR----VSYNSIMSVYAQSGMSN 268
Query: 217 KAVELFGMMPKKNVASW----------------------------------------VSL 236
+A E+F + K V ++ S+
Sbjct: 269 EAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSI 328
Query: 237 IDGFMRKGDLKKAGELFEQMPEKGVVSWTAMINGFSQNGEAEKALAMFFQMLDAGVRAND 296
ID + + G ++ A + F++M K V SWTAMI G+ +G A KAL +F M+D+GVR N
Sbjct: 329 IDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNY 388
Query: 297 FTVVSALSACAKVGALEAGVRVHNYISCNDFGLKGAIG--TALVDMYAKCGNIEAASLVF 354
T VS L+AC+ G G R N + FG++ + +VD+ + G ++ A +
Sbjct: 389 ITFVSVLAACSHAGLHVEGWRWFNAMK-GRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLI 447
Query: 355 GETKEK-DLLTWTAMIWGLAIHGRYEQA 381
K K D + W++++ IH E A
Sbjct: 448 QRMKMKPDSIIWSSLLAACRIHKNVELA 475
Score = 43.9 bits (102), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 78/196 (39%), Gaps = 8/196 (4%)
Query: 27 NNITETHIISLIHSSNSTKQLRQIHAQIILHNLFASSRITTQLISSASLHKSIDYALSIF 86
N IT + ++ + S + + + IH Q+I L + T +I ++ A F
Sbjct: 286 NAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAF 345
Query: 87 DHFTPKNLHIFNVLIRGLAENSHFQSCISHFVFMLRLSVRPNRLTYPFVSKSVASLSLLS 146
D KN+ + +I G + H + F M+ VRPN +T+ V + + L
Sbjct: 346 DRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHV 405
Query: 147 LG-RGLHCLIVKSGVEYDAFVRVHLADMYVQLGKTRGAFKVFDETPEKNKSESVLLWNVL 205
G R + + + GVE H M LG+ K +D ++W+ L
Sbjct: 406 EGWRWFNAMKGRFGVEPGL---EHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSL 462
Query: 206 INGCSKIGYLRKAVEL 221
+ C + K VEL
Sbjct: 463 LAACR----IHKNVEL 474
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 318 bits (816), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 210/726 (28%), Positives = 346/726 (47%), Gaps = 129/726 (17%)
Query: 40 SSNSTKQLRQIHAQIILHNLFASSRITTQLISSASLHKSIDYALSIFDHFTPKNLH---- 95
+ N ++ ++ IH II + + + ++ + +L KS YA +FD NL
Sbjct: 18 ARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNN 77
Query: 96 ---------------------------IFNVLIRGLAENSHFQSCISHFVFMLR-LSVRP 127
+NVLI G + + + + + M+R S
Sbjct: 78 LLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANL 137
Query: 128 NRLTYPFVSKSVASLSLLSLGRGLHCLIVKSGVEYDAFVRVHLADMYVQLGKTRGAFKVF 187
R+T + K +S +SLG+ +H ++K G E V L MY +G A KVF
Sbjct: 138 TRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVF 197
Query: 188 DETPEKNK--------------------------SESVLLWNVLINGCSKIGYLRKAVEL 221
++N + + W +I G ++ G ++A+E
Sbjct: 198 YGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIEC 257
Query: 222 FGMMP---------------------------------------KKNVASWVSLIDGFMR 242
F M + ++ +LID + +
Sbjct: 258 FREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCK 317
Query: 243 KGDLKKAGELFEQMPEKGVVSWTAMINGFSQNGEAEKALAMFFQMLDAGVRANDFTVVSA 302
L A +F++M +K VVSWTAM+ G+ Q G AE+A+ +F M +G+ + +T+ A
Sbjct: 318 CKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQA 377
Query: 303 LSACAKVGALEAGVRVHNYISCNDFGLKGAIGTALVDMYAKCGNIEAASLVFGETKEKDL 362
+SACA V +LE G + H + + +LV +Y KCG+I+ ++ +F E +D
Sbjct: 378 ISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDA 437
Query: 363 LTWTAMIWGLAIHGRYEQAIQYFKKMMYSGTEPDGTVFLAILTACWYSGQVKLALNFFDS 422
++WTAM+ A GR + IQ F KM+ G +PDG +++AC +G V+ +F
Sbjct: 438 VSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKL 497
Query: 423 MRFDYFIEPSVKHHTVVVNLLSRVGQ---------------DSQGY-------QNSQN-- 458
M +Y I PS+ H++ +++L SR G+ D+ G+ +N N
Sbjct: 498 MTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLE 557
Query: 459 ----SFTKLLQLKPKHPSSYVLLSNIYAAEGRWKDVARVRTLMQRRSIKKDPGWSYIEVN 514
+ L++L P HP+ Y LLS+IYA++G+W VA++R M+ +++KK+PG S+I+
Sbjct: 558 IGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWK 617
Query: 515 GHVHRFEAGGHK--LAKEIHSKLEDIMAGAREQGYMPGTEWVLHNIKEE-KEEALGCHSE 571
G +H F A +I++KLE++ + GY P T +V H+++E K + L HSE
Sbjct: 618 GKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHDVEEAVKVKMLNYHSE 677
Query: 572 KLALAFGLIQTTPGTTIKIVKKLTICGDCHSLMKYASKISQREIVLRD-TRFHYFKDGTC 630
+LA+AFGLI G I++ K L +C DCH+ K+ S ++ REI++RD RFH FKDGTC
Sbjct: 678 RLAIAFGLIFVPSGQPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKDGTC 737
Query: 631 SCRDYW 636
SC D+W
Sbjct: 738 SCGDFW 743
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis
thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 317 bits (813), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 193/660 (29%), Positives = 328/660 (49%), Gaps = 75/660 (11%)
Query: 48 RQIHAQIILHNLFASSRITTQLISSASLHKSIDYALSIFDHFTPKNLHIFNVLIRGLAEN 107
+Q+HA ++++I L++ + I+ AL F +N+ ++NV++
Sbjct: 409 QQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLL 468
Query: 108 SHFQSCISHFVFMLRLSVRPNRLTYPFVSKSVASLSLLSLGRGLHCLIVKSGVEYDAFVR 167
++ F M + PN+ TYP + K+ L L LG +H I+K+ + +A+V
Sbjct: 469 DDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVC 528
Query: 168 VHLADMYVQLGKTRGAFKVFDETPEKNKSESVLLWNVLINGCSKIGYLRKAVELFGMMPK 227
L DMY +LGK A+ + K+ V+ W +I G ++ + KA+ F M
Sbjct: 529 SVLIDMYAKLGKLDTAWDILIRFAGKD----VVSWTTMIAGYTQYNFDDKALTTFRQMLD 584
Query: 228 KNVAS---------------------------------------WVSLIDGFMRKGDLKK 248
+ + S +L+ + R G +++
Sbjct: 585 RGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEE 644
Query: 249 AGELFEQMPEKGVVSWTAMINGFSQNGEAEKALAMFFQMLDAGVRANDFTVVSALSACAK 308
+ FEQ ++W A+++GF Q+G E+AL +F +M G+ N+FT SA+ A ++
Sbjct: 645 SYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASE 704
Query: 309 VGALEAGVRVHNYISCNDFGLKGAIGTALVDMYAKCGNIEAASLVFGETKEKDLLTWTAM 368
++ G +VH I+ + + + AL+ MYAKCG+I A F E K+ ++W A+
Sbjct: 705 TANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAI 764
Query: 369 IWGLAIHGRYEQAIQYFKKMMYSGTEPDGTVFLAILTACWYSGQVKLALNFFDSMRFDYF 428
I + HG +A+ F +M++S P+ + +L+AC + G V + +F+SM +Y
Sbjct: 765 INAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYG 824
Query: 429 IEPSVKHHTVVVNLLSRVGQDSQGYQNSQNSFTK-------------------------- 462
+ P +H+ VV++L+R G S+ + Q K
Sbjct: 825 LSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAA 884
Query: 463 --LLQLKPKHPSSYVLLSNIYAAEGRWKDVARVRTLMQRRSIKKDPGWSYIEVNGHVHRF 520
LL+L+P+ ++YVLLSN+YA +W R M+ + +KK+PG S+IEV +H F
Sbjct: 885 HHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSF 944
Query: 521 EAG--GHKLAKEIHSKLEDIMAGAREQGYMPGTEWVLHNIK-EEKEEALGCHSEKLALAF 577
G H LA EIH +D+ A E GY+ +L+ ++ E+K+ + HSEKLA++F
Sbjct: 945 YVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISF 1004
Query: 578 GLIQTTPGTTIKIVKKLTICGDCHSLMKYASKISQREIVLRDT-RFHYFKDGTCSCRDYW 636
GL+ I ++K L +C DCH+ +K+ SK+S REI++RD RFH+F+ G CSC+DYW
Sbjct: 1005 GLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064
Score = 129 bits (324), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 147/330 (44%), Gaps = 45/330 (13%)
Query: 125 VRPNRLTYPFVSKS-VASLSLLSLGRGLHCLIVKSGVEYDAFVRVHLADMYVQLGKTRGA 183
+RPN T ++ + + + L GR LH I+K G++ + + L D Y+ G GA
Sbjct: 80 IRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGA 139
Query: 184 FKVFDETPEKNKSESVLLWNVLINGCSKIGYLRKAVELFGMMPKKNVAS----------- 232
FKVFDE PE+ ++ WN +I + + + LF M +NV
Sbjct: 140 FKVFDEMPER----TIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEA 195
Query: 233 -----------------------------WVSLIDGFMRKGDLKKAGELFEQMPEKGVVS 263
LID + R G + A +F+ + K S
Sbjct: 196 CRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSS 255
Query: 264 WTAMINGFSQNGEAEKALAMFFQMLDAGVRANDFTVVSALSACAKVGALEAGVRVHNYIS 323
W AMI+G S+N +A+ +F M G+ + S LSAC K+ +LE G ++H +
Sbjct: 256 WVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVL 315
Query: 324 CNDFGLKGAIGTALVDMYAKCGNIEAASLVFGETKEKDLLTWTAMIWGLAIHGRYEQAIQ 383
F + ALV +Y GN+ +A +F ++D +T+ +I GL+ G E+A++
Sbjct: 316 KLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAME 375
Query: 384 YFKKMMYSGTEPDGTVFLAILTACWYSGQV 413
FK+M G EPD +++ AC G +
Sbjct: 376 LFKRMHLDGLEPDSNTLASLVVACSADGTL 405
Score = 127 bits (318), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 103/433 (23%), Positives = 189/433 (43%), Gaps = 44/433 (10%)
Query: 24 KPSNNITETHIISLIHSSNSTKQLRQIHAQIILHNLFASSRITTQLISSASLHKSIDYAL 83
+P++ + + + ++ S + R++H+QI+ L ++ ++ +L + A
Sbjct: 81 RPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAF 140
Query: 84 SIFDHFTPKNLHIFNVLIRGLAENSHFQSCISHFVFMLRLSVRPNRLTYPFVSKSVASLS 143
+FD + + +N +I+ LA + FV M+ +V PN T+ V ++ S
Sbjct: 141 KVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGS 200
Query: 144 L-LSLGRGLHCLIVKSGVEYDAFVRVHLADMYVQLGKTRGAFKVFDETPEKNKSESVLLW 202
+ + +H I+ G+ V L D+Y + G A +VFD K+ S W
Sbjct: 201 VAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSS----W 256
Query: 203 NVLINGCSKIGYLRKAVELF------GMMPKKNVASWV---------------------- 234
+I+G SK +A+ LF G+MP S V
Sbjct: 257 VAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLK 316
Query: 235 -----------SLIDGFMRKGDLKKAGELFEQMPEKGVVSWTAMINGFSQNGEAEKALAM 283
+L+ + G+L A +F M ++ V++ +ING SQ G EKA+ +
Sbjct: 317 LGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMEL 376
Query: 284 FFQMLDAGVRANDFTVVSALSACAKVGALEAGVRVHNYISCNDFGLKGAIGTALVDMYAK 343
F +M G+ + T+ S + AC+ G L G ++H Y + F I AL+++YAK
Sbjct: 377 FKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAK 436
Query: 344 CGNIEAASLVFGETKEKDLLTWTAMIWGLAIHGRYEQAIQYFKKMMYSGTEPDGTVFLAI 403
C +IE A F ET+ ++++ W M+ + + + F++M P+ + +I
Sbjct: 437 CADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSI 496
Query: 404 LTACWYSGQVKLA 416
L C G ++L
Sbjct: 497 LKTCIRLGDLELG 509
Score = 70.1 bits (170), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 128/299 (42%), Gaps = 16/299 (5%)
Query: 26 SNNITETHIISLIHSSNSTKQLRQIHAQIILHNLFASSRITTQLISSASLHKSIDYALSI 85
S+ + T+ +S + K+ +QIHAQ + + L++ S I+ +
Sbjct: 589 SDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLA 648
Query: 86 FDHFTPKNLHIFNVLIRGLAENSHFQSCISHFVFMLRLSVRPNRLTYPFVSKSVASLSLL 145
F+ + +N L+ G ++ + + + FV M R + N T+ K+ + + +
Sbjct: 649 FEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANM 708
Query: 146 SLGRGLHCLIVKSGVEYDAFVRVHLADMYVQLGKTRGAFKVFDETPEKNKSESVLLWNVL 205
G+ +H +I K+G + + V L MY + G A K F E KN+ + WN +
Sbjct: 709 KQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNE----VSWNAI 764
Query: 206 INGCSKIGYLRKAVELFGMMPKKNV----ASWVSLIDGFMRKGDLKKAGELFEQMPEKGV 261
IN SK G+ +A++ F M NV + V ++ G + K FE M +
Sbjct: 765 INAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYG 824
Query: 262 VS-----WTAMINGFSQNGEAEKALAMFFQMLDAGVRANDFTVVSALSACAKVGALEAG 315
+S + +++ ++ G +A +M ++ + + LSAC +E G
Sbjct: 825 LSPKPEHYVCVVDMLTRAGLLSRAKEFIQEM---PIKPDALVWRTLLSACVVHKNMEIG 880
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 52/118 (44%), Gaps = 1/118 (0%)
Query: 291 GVRANDFTVVSALSACAKV-GALEAGVRVHNYISCNDFGLKGAIGTALVDMYAKCGNIEA 349
G+R N T+ L C K G+L+ G ++H+ I G + L D Y G++
Sbjct: 79 GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYG 138
Query: 350 ASLVFGETKEKDLLTWTAMIWGLAIHGRYEQAIQYFKKMMYSGTEPDGTVFLAILTAC 407
A VF E E+ + TW MI LA + F +M+ P+ F +L AC
Sbjct: 139 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEAC 196
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 316 bits (809), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 210/683 (30%), Positives = 342/683 (50%), Gaps = 99/683 (14%)
Query: 36 SLIHSSNSTKQLRQIHAQIILHNLFASSRITTQLISSASLHKSIDYALSIFDHFTPKNLH 95
S++ + + +IH + + LI S +K++ A +FD +++
Sbjct: 158 SVLKACRTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMG 217
Query: 96 IFNVLIRGLAENSHFQSCISHFVFMLRLSVRPNRLTYPFVSKSVASLSLLS-------LG 148
+N +I G ++ + + ++ L +R SV +SLLS
Sbjct: 218 SWNAMISGYCQSGNAKEALT-----LSNGLR--------AMDSVTVVSLLSACTEAGDFN 264
Query: 149 RG--LHCLIVKSGVEYDAFVRVHLADMYVQLGKTRGAFKVFDETPEKNKSESVLLWNVLI 206
RG +H +K G+E + FV L D+Y + G+ R KVFD ++ ++ WN +I
Sbjct: 265 RGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRD----LISWNSII 320
Query: 207 NGCSKIGYLRKAVELFGMMP----KKNVASWVSL---------------IDGF-MRKG-- 244
+A+ LF M + + + +SL + GF +RKG
Sbjct: 321 KAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWF 380
Query: 245 --DL----------------KKAGELFEQMPEKGVVSWTAMINGFSQNGEAEKALAMFFQ 286
D+ A +F +P V+SW +I+G++QNG A +A+ M+
Sbjct: 381 LEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNI 440
Query: 287 MLDAG-VRANDFTVVSALSACAKVGALEAGVRVHNYISCNDFGLKGAIGTALVDMYAKCG 345
M + G + AN T VS L AC++ GAL G+++H + N L + T+L DMY KCG
Sbjct: 441 MEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCG 500
Query: 346 NIEAASLVFGETKEKDLLTWTAMIWGLAIHGRYEQAIQYFKKMMYSGTEPDGTVFLAILT 405
+E A +F + + + W +I HG E+A+ FK+M+ G +PD F+ +L+
Sbjct: 501 RLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLS 560
Query: 406 ACWYSGQVKLALNFFDSMRFDYFIEPSVKHHTVVVNLLSRVGQ--------DSQGYQNSQ 457
AC +SG V F+ M+ DY I PS+KH+ +V++ R GQ S Q
Sbjct: 561 ACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDA 620
Query: 458 NSFTKLL--------------------QLKPKHPSSYVLLSNIYAAEGRWKDVARVRTLM 497
+ + LL +++P+H +VLLSN+YA+ G+W+ V +R++
Sbjct: 621 SIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIA 680
Query: 498 QRRSIKKDPGWSYIEVNGHVHRFEAGG--HKLAKEIHSKLEDIMAGAREQGYMPGTEWVL 555
+ ++K PGWS +EV+ V F G H + +E++ +L + A + GY+P +VL
Sbjct: 681 HGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPDHRFVL 740
Query: 556 HNIKE-EKEEALGCHSEKLALAFGLIQTTPGTTIKIVKKLTICGDCHSLMKYASKISQRE 614
++++ EKE L HSE+LA+AF LI T TTI+I K L +CGDCHS+ K+ SKI++RE
Sbjct: 741 QDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCHSVTKFISKITERE 800
Query: 615 IVLRDT-RFHYFKDGTCSCRDYW 636
I++RD+ RFH+FK+G CSC DYW
Sbjct: 801 IIVRDSNRFHHFKNGVCSCGDYW 823
Score = 125 bits (315), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 103/474 (21%), Positives = 211/474 (44%), Gaps = 52/474 (10%)
Query: 3 GHVFNRLTTAIAPTTNIKSSHKPSNNITETHIISLIHSSNSTKQLRQIHAQIILHNLFAS 62
G V + + + + S I + H +L + + + +HA++++ +
Sbjct: 28 GSVIREFSASANALQDCWKNGNESKEIDDVH--TLFRYCTNLQSAKCLHARLVVSKQIQN 85
Query: 63 SRITTQLISSASLHKSIDYALSIFDHFTPKNLHIFNVLIRGLAENSHFQSCISHF-VFML 121
I+ +L++ ++ A FDH ++++ +N++I G + I F +FML
Sbjct: 86 VCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFML 145
Query: 122 RLSVRPNRLTYPFVSKSVASLSLLSLGRGLHCLIVKSGVEYDAFVRVHLADMYVQLGKTR 181
+ P+ T+P V K+ ++ G +HCL +K G +D +V L +Y +
Sbjct: 146 SSGLTPDYRTFPSVLKACRTVID---GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVG 202
Query: 182 GAFKVFDETPEKNKSESVLLWNVLINGCSKIGYLRKAVEL---FGMMPKKNVASWVS--- 235
A +FDE P ++ WN +I+G + G ++A+ L M V S +S
Sbjct: 203 NARILFDEMPVRDMGS----WNAMISGYCQSGNAKEALTLSNGLRAMDSVTVVSLLSACT 258
Query: 236 -----------------------------LIDGFMRKGDLKKAGELFEQMPEKGVVSWTA 266
LID + G L+ ++F++M + ++SW +
Sbjct: 259 EAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNS 318
Query: 267 MINGFSQNGEAEKALAMFFQMLDAGVRANDFTVVSALSACAKVGALEAGVRVHNYISCND 326
+I + N + +A+++F +M + ++ + T++S S +++G + A V +
Sbjct: 319 IIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKG 378
Query: 327 FGLKG-AIGTALVDMYAKCGNIEAASLVFGETKEKDLLTWTAMIWGLAIHGRYEQAIQYF 385
+ L+ IG A+V MYAK G +++A VF D+++W +I G A +G +AI+ +
Sbjct: 379 WFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMY 438
Query: 386 KKMMYSG-TEPDGTVFLAILTACWYSGQVKLALNFF-----DSMRFDYFIEPSV 433
M G + ++++L AC +G ++ + + + D F+ S+
Sbjct: 439 NIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSL 492
Score = 34.7 bits (78), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 34/185 (18%), Positives = 74/185 (40%), Gaps = 4/185 (2%)
Query: 26 SNNITETHIISLIHSSNSTKQLRQIHAQIILHNLFASSRITTQLISSASLHKSIDYALSI 85
+N T ++ + + +Q ++H +++ + L+ + T L ++ ALS+
Sbjct: 449 ANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSL 508
Query: 86 FDHFTPKNLHIFNVLIRGLAENSHFQSCISHFVFMLRLSVRPNRLTYPFVSKSVASLSLL 145
F N +N LI + H + + F ML V+P+ +T+ + + + L+
Sbjct: 509 FYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLV 568
Query: 146 SLGR-GLHCLIVKSGVEYDAFVRVHLADMYVQLGKTRGAFKVFDETPEKNKSESVLLWNV 204
G+ + G+ + DMY + G+ A K + + +W
Sbjct: 569 DEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDAS---IWGA 625
Query: 205 LINGC 209
L++ C
Sbjct: 626 LLSAC 630
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 314 bits (805), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 193/566 (34%), Positives = 289/566 (51%), Gaps = 76/566 (13%)
Query: 143 SLLSLGRGLHCLIVKSGVEYDAFVRVHLADMYVQLGKTRGAFKVFDETPEKNKSESVLLW 202
S L + LHC +K Y+ V Y + G A +VF +S++V W
Sbjct: 409 SFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGI----RSKTVNSW 464
Query: 203 NVLING-----------------------------------CSKIGYLRKAVELFGMMPK 227
N LI G CSK+ LR E+ G + +
Sbjct: 465 NALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIR 524
Query: 228 ----KNVASWVSLIDGFMRKGDLKKAGELFEQMPEKGVVSWTAMINGFSQNGEAEKALAM 283
+++ ++S++ ++ G+L LF+ M +K +VSW +I G+ QNG ++AL +
Sbjct: 525 NWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGV 584
Query: 284 FFQMLDAGVRANDFTVVSALSACAKVGALEAGVRVHNYISCNDFGLKGAIGTALVDMYAK 343
F QM+ G++ +++ AC+ + +L G H Y + I +L+DMYAK
Sbjct: 585 FRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAK 644
Query: 344 CGNIEAASLVFGETKEKDLLTWTAMIWGLAIHGRYEQAIQYFKKMMYSGTEPDGTVFLAI 403
G+I +S VF KEK +W AMI G IHG ++AI+ F++M +G PD FL +
Sbjct: 645 NGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGV 704
Query: 404 LTACWYSGQVKLALNFFDSMRFDYFIEPSVKHHTVVVNLLSRVGQDS------------- 450
LTAC +SG + L + D M+ + ++P++KH+ V+++L R GQ
Sbjct: 705 LTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEE 764
Query: 451 ----------------QGYQNSQNSFTKLLQLKPKHPSSYVLLSNIYAAEGRWKDVARVR 494
Q + + KL +L+P+ P +YVLLSN+YA G+W+DV +VR
Sbjct: 765 ADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVR 824
Query: 495 TLMQRRSIKKDPGWSYIEVNGHVHRFEAGGHKLA--KEIHSKLEDIMAGAREQGYMPGTE 552
M S++KD G S+IE+N V F G L +EI S + + GY P T
Sbjct: 825 QRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTM 884
Query: 553 WVLHNI-KEEKEEALGCHSEKLALAFGLIQTTPGTTIKIVKKLTICGDCHSLMKYASKIS 611
V H++ +EEK E L HSEKLAL +GLI+T+ GTTI++ K L IC DCH+ K SK+
Sbjct: 885 SVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVM 944
Query: 612 QREIVLRDT-RFHYFKDGTCSCRDYW 636
+REIV+RD RFH+FK+G CSC DYW
Sbjct: 945 EREIVVRDNKRFHHFKNGVCSCGDYW 970
Score = 139 bits (351), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 104/389 (26%), Positives = 175/389 (44%), Gaps = 50/389 (12%)
Query: 65 ITTQLISSASLHKSIDYALSIFDHFTPKNLHIFNVLIRGLAENSHFQSCISHFVFMLRLS 124
+ T++I+ ++ S D + +FD KNL +N +I + N + + F+ M+ +
Sbjct: 122 LCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTT 181
Query: 125 -VRPNRLTYPFVSKSVASLSLLSLGRGLHCLIVKSGVEYDAFVRVHLADMYVQLGKTRGA 183
+ P+ TYP V K+ A +S + +G +H L+VK+G+ D FV L Y G A
Sbjct: 182 DLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDA 241
Query: 184 FKVFDETPEKNKSESVLLWNVLINGCSKIGYLRKAVELFGMMPKKN--------VASWVS 235
++FD PE+N ++ WN +I S G+ ++ L G M ++N VA+ V+
Sbjct: 242 LQLFDIMPERN----LVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVT 297
Query: 236 -----------------------------------LIDGFMRKGDLKKAGELFEQMPEKG 260
L+D + + G + A +F+ K
Sbjct: 298 VLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKN 357
Query: 261 VVSWTAMINGFSQNGEAEKALAMFFQMLDAG--VRANDFTVVSALSACAKVGALEAGVRV 318
VVSW M+ GFS G+ + QML G V+A++ T+++A+ C L + +
Sbjct: 358 VVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKEL 417
Query: 319 HNYISCNDFGLKGAIGTALVDMYAKCGNIEAASLVFGETKEKDLLTWTAMIWGLAIHGRY 378
H Y +F + A V YAKCG++ A VF + K + +W A+I G A
Sbjct: 418 HCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDP 477
Query: 379 EQAIQYFKKMMYSGTEPDGTVFLAILTAC 407
++ +M SG PD ++L+AC
Sbjct: 478 RLSLDAHLQMKISGLLPDSFTVCSLLSAC 506
Score = 117 bits (293), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 99/445 (22%), Positives = 196/445 (44%), Gaps = 54/445 (12%)
Query: 6 FNRLTTAIAPTTNIKSSHKPSNNITETHIISLIHSSNSTKQLRQIHAQIILHNLFASSRI 65
F+ L +A ++K+ + +T + + + + L+++H + + +
Sbjct: 378 FDVLRQMLAGGEDVKA-----DEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELV 432
Query: 66 TTQLISSASLHKSIDYALSIFDHFTPKNLHIFNVLIRGLAENSHFQSCISHFVFMLRLSV 125
++S + S+ YA +F K ++ +N LI G A+++ + + + M +
Sbjct: 433 ANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGL 492
Query: 126 RPNRLTYPFVSKSVASLSLLSLGRGLHCLIVKSGVEYDAFVRVHLADMYVQLGKTRGAFK 185
P+ T + + + L L LG+ +H I+++ +E D FV + + +Y+ G+
Sbjct: 493 LPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQA 552
Query: 186 VFDETPEKNKSESVLLWNVLINGCSKIGYLRKAVELF-------------GMMPKKNVAS 232
+FD +K S++ WN +I G + G+ +A+ +F MMP S
Sbjct: 553 LFDAMEDK----SLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACS 608
Query: 233 WV--------------------------SLIDGFMRKGDLKKAGELFEQMPEKGVVSWTA 266
+ SLID + + G + ++ ++F + EK SW A
Sbjct: 609 LLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNA 668
Query: 267 MINGFSQNGEAEKALAMFFQMLDAGVRANDFTVVSALSACAKVGALEAGVRVHNYISCND 326
MI G+ +G A++A+ +F +M G +D T + L+AC G + G+R + + +
Sbjct: 669 MIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMK-SS 727
Query: 327 FGLKGAIG--TALVDMYAKCGNIEAASLVFGE--TKEKDLLTWTAMIWGLAIHGRYEQAI 382
FGLK + ++DM + G ++ A V E ++E D+ W +++ IH E
Sbjct: 728 FGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGE 787
Query: 383 QYFKKMMYSGTE-PDGTVFLAILTA 406
+ K+ E P+ V L+ L A
Sbjct: 788 KVAAKLFELEPEKPENYVLLSNLYA 812
Score = 107 bits (266), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 93/403 (23%), Positives = 170/403 (42%), Gaps = 49/403 (12%)
Query: 50 IHAQIILHNLFASSRITTQLISSASLHKSIDYALSIFDHFTPKNLHIFNVLIRGLAENSH 109
+H ++ L + L+S H + AL +FD +NL +N +IR ++N
Sbjct: 209 VHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGF 268
Query: 110 FQSCISHFVFMLRL----SVRPNRLTYPFVSKSVASLSLLSLGRGLHCLIVKSGVEYDAF 165
+ M+ + P+ T V A + LG+G+H VK ++ +
Sbjct: 269 SEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELV 328
Query: 166 VRVHLADMYVQLGKTRGAFKVFDETPEKNKSESVLLWNVLINGCSKIG-------YLRK- 217
+ L DMY + G A +F + N +++V+ WN ++ G S G LR+
Sbjct: 329 LNNALMDMYSKCGCITNAQMIF----KMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQM 384
Query: 218 ----------AVELFGMMPKKNVASWV-----------------------SLIDGFMRKG 244
V + +P S++ + + + + G
Sbjct: 385 LAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCG 444
Query: 245 DLKKAGELFEQMPEKGVVSWTAMINGFSQNGEAEKALAMFFQMLDAGVRANDFTVVSALS 304
L A +F + K V SW A+I G +Q+ + +L QM +G+ + FTV S LS
Sbjct: 445 SLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLS 504
Query: 305 ACAKVGALEAGVRVHNYISCNDFGLKGAIGTALVDMYAKCGNIEAASLVFGETKEKDLLT 364
AC+K+ +L G VH +I N + +++ +Y CG + +F ++K L++
Sbjct: 505 ACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVS 564
Query: 365 WTAMIWGLAIHGRYEQAIQYFKKMMYSGTEPDGTVFLAILTAC 407
W +I G +G ++A+ F++M+ G + G + + AC
Sbjct: 565 WNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGAC 607
Score = 89.7 bits (221), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 129/312 (41%), Gaps = 51/312 (16%)
Query: 145 LSLGRGLHCLIVKSG-VEYDAFVRVHLADMYVQLGKTRGAFKVFDETPEKNKSESVLLWN 203
+ +GR +H L+ S + D + + MY G + VFD KN + WN
Sbjct: 100 IEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKN----LFQWN 155
Query: 204 VLINGCSKIGYLRKAVELF------------------------------------GMMPK 227
+I+ S+ + +E F G++ K
Sbjct: 156 AVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVK 215
Query: 228 KNVASWV----SLIDGFMRKGDLKKAGELFEQMPEKGVVSWTAMINGFSQNGEAEKALAM 283
+ V +L+ + G + A +LF+ MPE+ +VSW +MI FS NG +E++ +
Sbjct: 216 TGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLL 275
Query: 284 FFQML----DAGVRANDFTVVSALSACAKVGALEAGVRVHNYISCNDFGLKGAIGTALVD 339
+M+ D + T+V+ L CA+ + G VH + + + AL+D
Sbjct: 276 LGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMD 335
Query: 340 MYAKCGNIEAASLVFGETKEKDLLTWTAMIWGLAIHGRYEQAIQYFKKMMYSGTE--PDG 397
MY+KCG I A ++F K++++W M+ G + G ++M+ G + D
Sbjct: 336 MYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADE 395
Query: 398 TVFLAILTACWY 409
L + C++
Sbjct: 396 VTILNAVPVCFH 407
Score = 49.7 bits (117), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 76/163 (46%), Gaps = 18/163 (11%)
Query: 268 INGFSQNGEAEKALAMFFQML-DAGVRANDFTVVSA-----LSACAKVGALEAGVRVHNY 321
I+ F + G+ +K+ + + D ++ F +V L A K +E G ++H
Sbjct: 50 ISNFCETGDLDKSFRTVQEFVGDDESSSDAFLLVREALGLLLQASGKRKDIEMGRKIHQL 109
Query: 322 ISC-----NDFGLKGAIGTALVDMYAKCGNIEAASLVFGETKEKDLLTWTAMIWGLAIHG 376
+S ND + T ++ MYA CG+ + + VF + K+L W A+I + +
Sbjct: 110 VSGSTRLRND----DVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNE 165
Query: 377 RYEQAIQYFKKMMYSGTE--PDGTVFLAILTACWYSGQVKLAL 417
Y++ ++ F +M+ S T+ PD + ++ AC V + L
Sbjct: 166 LYDEVLETFIEMI-STTDLLPDHFTYPCVIKACAGMSDVGIGL 207
>sp|Q9SV26|PP297_ARATH Pentatricopeptide repeat-containing protein At4g01030,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H65 PE=3
SV=2
Length = 768
Score = 314 bits (805), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 200/655 (30%), Positives = 338/655 (51%), Gaps = 53/655 (8%)
Query: 27 NNITETHIISLIHSSNSTKQL-RQIHAQIILHNLFASSRITTQLISSASLHKSIDYALSI 85
+N++ + + +++S N +L R++ + NL + + I +SS + +D A+ +
Sbjct: 122 SNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSI----LSSYTKLGYVDDAIGL 177
Query: 86 FDHFT----PKNLHIFNVLIRGLAENSHFQSCISHFVFMLRLSVRPNRLTYPFVSKSVAS 141
D ++ +N L+ G A + I+ M ++P+ + + ++VA
Sbjct: 178 LDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAE 237
Query: 142 LSLLSLGRGLHCLIVKSGVEYDAFVRVHLADMYVQLGKTRGAFKVFDETPEKNKSESVLL 201
L LG+ +H I+++ + YD +V L DMY++ G A VFD KN ++
Sbjct: 238 PGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKN----IVA 293
Query: 202 WNVLINGCSKIGYLRKAVELFGMMPKKNVA----SWVSLIDGFMRKGDLKKAGELFEQMP 257
WN L++G S L+ A L M K+ + +W SL G+ G +KA ++ +M
Sbjct: 294 WNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMK 353
Query: 258 EKGV----VSWTAMINGFSQNGEAEKALAMFFQMLDAGVRANDFTVVSALSACAKVGALE 313
EKGV VSWTA+ +G S+NG AL +F +M + GV N T+ + L + L
Sbjct: 354 EKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLH 413
Query: 314 AGVRVHNYISCNDFGLKGAIGTALVDMYAKCGNIEAASLVFGETKEKDLLTWTAMIWGLA 373
+G VH + + + TALVDMY K G++++A +F K K L +W M+ G A
Sbjct: 414 SGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYA 473
Query: 374 IHGRYEQAIQYFKKMMYSGTEPDGTVFLAILTACWYSGQVKLALNFFDSMRFDYFIEPSV 433
+ GR E+ I F M+ +G EPD F ++L+ C SG V+ +FD MR Y I P++
Sbjct: 474 MFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTI 533
Query: 434 KHHTVVVNLLSRVGQDSQGYQNSQN----------------------------SFTKLLQ 465
+H + +V+LL R G + + Q ++ +L
Sbjct: 534 EHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQV 593
Query: 466 LKPKHPSSYVLLSNIYAAEGRWKDVARVRTLMQRRSIKKDPGWSYIEVNGHVHRFEAGG- 524
L+P + ++Y+++ N+Y+ RW+DV R+R LM+ ++ WS+I+++ VH F A G
Sbjct: 594 LEPHNSANYMMMINLYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGK 653
Query: 525 -HKLAKEIHSKLEDIMAGAREQGYMPGTEWVLHNIKE-EKEEALGCHSEKLALAFGLIQT 582
H +I+ +L +++ ++ GY+P T + +I + EKE+ L H+EKLA+ +GLI+
Sbjct: 654 THPDEGDIYFELYKLVSEMKKSGYVPDTSCIHQDISDSEKEKLLMGHTEKLAMTYGLIKK 713
Query: 583 TPGTTIKIVKKLTICGDCHSLMKYASKISQREIVLRD-TRFHYFKDGTCSCRDYW 636
I++VK IC D H++ KY S + REIVL++ R H+F+DG CSC D W
Sbjct: 714 KGLAPIRVVKNTNICSDSHTVAKYMSVLRNREIVLQEGARVHHFRDGKCSCNDSW 768
Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/419 (21%), Positives = 184/419 (43%), Gaps = 45/419 (10%)
Query: 50 IHAQIILHNLFAS-SRITTQLISSASLHKSIDYALSIFDHFTPKNLHIFNVLIRGLAENS 108
IH +I L S +R+ + + S+ +A +FD ++ +N ++ +
Sbjct: 9 IHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLRSG 68
Query: 109 HFQSCISHFVFMLRLSVRPNRLTYPFVSKSVASLSLLSLGRGLHCLIVKSGVEYDAFVRV 168
+++ + F M + T + + ++ + GR +H +++ G+E + +
Sbjct: 69 NWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCN 128
Query: 169 HLADMYVQLGKTRGAFKVFDETPEKNKSESVLLWNVLINGCSKIGYLRKAVELFGMMP-- 226
L MY + GK + KVF+ ++N S WN +++ +K+GY+ A+ L M
Sbjct: 129 SLIVMYSRNGKLELSRKVFNSMKDRNLSS----WNSILSSYTKLGYVDDAIGLLDEMEIC 184
Query: 227 --KKNVASWVSLIDGFMRKGDLKKAGELFEQMPEKGVVSWTAMINGFSQNGEAEKALAMF 284
K ++ +W SL+ G+ K G ++ A+A+
Sbjct: 185 GLKPDIVTWNSLLSGYASK-------------------------------GLSKDAIAVL 213
Query: 285 FQMLDAGVRANDFTVVSALSACAKVGALEAGVRVHNYISCNDFGLKGAIGTALVDMYAKC 344
+M AG++ + ++ S L A A+ G L+ G +H YI N + T L+DMY K
Sbjct: 214 KRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKT 273
Query: 345 GNIEAASLVFGETKEKDLLTWTAMIWGLAIHGRYEQAIQYFKKMMYSGTEPDGTVFLAIL 404
G + A +VF K+++ W +++ GL+ + A +M G +PD + ++
Sbjct: 274 GYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLA 333
Query: 405 TACWYSGQVKLALNFFDSMRFDYFIEPSVKHHTVVVNLLSRVGQDSQGYQNSQNSFTKL 463
+ G+ + AL+ M+ + + P+V T + + S+ G ++N+ F K+
Sbjct: 334 SGYATLGKPEKALDVIGKMK-EKGVAPNVVSWTAIFSGCSKNGN----FRNALKVFIKM 387
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 312 bits (800), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 189/584 (32%), Positives = 299/584 (51%), Gaps = 78/584 (13%)
Query: 125 VRPNRLTYPFVSKSVASLSLLSLGRGLHCLIVKSGVEYDAFVRVHLADMYVQLGKTRGAF 184
+ +R Y + K LL GR +H I++S +D + L +MY + G A
Sbjct: 56 IPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEAR 115
Query: 185 KVFDETPEKNKSESVLLWNVLING-------CSKIGYLRKAVELFGMMPKK--------- 228
KVF++ P+++ + W LI+G C + + + + FG P +
Sbjct: 116 KVFEKMPQRD----FVTWTTLISGYSQHDRPCDALLFFNQMLR-FGYSPNEFTLSSVIKA 170
Query: 229 ------------------------NVASWVSLIDGFMRKGDLKKAGELFEQMPEKGVVSW 264
NV +L+D + R G + A +F+ + + VSW
Sbjct: 171 AAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSW 230
Query: 265 TAMINGFSQNGEAEKALAMFFQMLDAGVRANDFTVVSALSACAKVGALEAGVRVHNYISC 324
A+I G ++ EKAL +F ML G R + F+ S AC+ G LE G VH Y+
Sbjct: 231 NALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIK 290
Query: 325 NDFGLKGAIGTALVDMYAKCGNIEAASLVFGETKEKDLLTWTAMIWGLAIHGRYEQAIQY 384
+ L G L+DMYAK G+I A +F ++D+++W +++ A HG ++A+ +
Sbjct: 291 SGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWW 350
Query: 385 FKKMMYSGTEPDGTVFLAILTACWYSGQVKLALNFFDSMRFDYFIEPSVKHHTVVVNLLS 444
F++M G P+ FL++LTAC +SG + ++++ M+ D + P H+ VV+LL
Sbjct: 351 FEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIV-PEAWHYVTVVDLLG 409
Query: 445 RVGQDSQG-------------------------YQNSQ---NSFTKLLQLKPKHPSSYVL 476
R G ++ ++N++ + + +L P P +V+
Sbjct: 410 RAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVI 469
Query: 477 LSNIYAAEGRWKDVARVRTLMQRRSIKKDPGWSYIEVNGHVHRFEAGG--HKLAKEIHSK 534
L NIYA+ GRW D ARVR M+ +KK+P S++E+ +H F A H +EI K
Sbjct: 470 LYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARK 529
Query: 535 LEDIMAGAREQGYMPGTEWVL-HNIKEEKEEALGCHSEKLALAFGLIQTTPGTTIKIVKK 593
E+++A +E GY+P T V+ H ++E+E L HSEK+ALAF L+ T PG+TI I K
Sbjct: 530 WEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKN 589
Query: 594 LTICGDCHSLMKYASKISQREIVLRDT-RFHYFKDGTCSCRDYW 636
+ +CGDCH+ +K ASK+ REI++RDT RFH+FKDG CSC+DYW
Sbjct: 590 IRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDGNCSCKDYW 633
Score = 83.6 bits (205), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 142/330 (43%), Gaps = 16/330 (4%)
Query: 49 QIHAQIILHNLFASSRITTQLISSASLHKSIDYALSIFDHFTPKNLHIFNVLIRGLAENS 108
Q+H + ++ + + L+ + + +D A +FD +N +N LI G A S
Sbjct: 182 QLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRS 241
Query: 109 HFQSCISHFVFMLRLSVRPNRLTYPFVSKSVASLSLLSLGRGLHCLIVKSGVEYDAFVRV 168
+ + F MLR RP+ +Y + + +S L G+ +H ++KSG + AF
Sbjct: 242 GTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGN 301
Query: 169 HLADMYVQLGKTRGAFKVFDETPEKNKSESVLLWNVLINGCSKIGYLRKAVELFGMMP-- 226
L DMY + G A K+FD +++ V+ WN L+ ++ G+ ++AV F M
Sbjct: 302 TLLDMYAKSGSIHDARKIFDRLAKRD----VVSWNSLLTAYAQHGFGKEAVWWFEEMRRV 357
Query: 227 --KKNVASWVSLIDGFMRKGDLKKAGELFEQMPEKGVVS----WTAMINGFSQNGEAEKA 280
+ N S++S++ G L + +E M + G+V + +++ + G+ +A
Sbjct: 358 GIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRA 417
Query: 281 LAMFFQMLDAGVRANDFTVVSALSACAKVGALEAGVRVHNYISCNDFGLKGAIGTALVDM 340
L +M + + L+AC E G ++ D G L ++
Sbjct: 418 LRFIEEM---PIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGP-HVILYNI 473
Query: 341 YAKCGNIEAASLVFGETKEKDLLTWTAMIW 370
YA G A+ V + KE + A W
Sbjct: 474 YASGGRWNDAARVRKKMKESGVKKEPACSW 503
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 311 bits (798), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 201/646 (31%), Positives = 324/646 (50%), Gaps = 96/646 (14%)
Query: 76 HKSIDYALSIFDHFTPKNLHIFNVLIRGLAENSHFQSCISHFVFMLRLSVRPNRLTYPFV 135
S + A +FD + N+ + ++I + + I F+ M+ ++ T V
Sbjct: 216 ENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSV 275
Query: 136 SKSVASLSLLSLGRGLHCLIVKSGVEYDAFVRVHLADMYVQL---GKTRGAFKVFDETPE 192
+ A L LSLG+ LH ++SG+ D V L DMY + G KVFD
Sbjct: 276 FSACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFD---- 329
Query: 193 KNKSESVLLWNVLING-------------------------------------CSKIGYL 215
+ + SV+ W LI G C +
Sbjct: 330 RMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDP 389
Query: 216 RKAVELFGMMPKKNVAS----WVSLIDGFMRKGDLKKAGELFEQMPEKGVVSWTAMINGF 271
R ++ G K+ +AS S+I F++ ++ A FE + EK +VS+ ++G
Sbjct: 390 RVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGT 449
Query: 272 SQNGEAEKALAMFFQMLDAGVRANDFTVVSALSACAKVGALEAGVRVHNYI-----SCND 326
+N E+A + ++ + + + FT S LS A VG++ G ++H+ + SCN
Sbjct: 450 CRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQ 509
Query: 327 FGLKGAIGTALVDMYAKCGNIEAASLVFGETKEKDLLTWTAMIWGLAIHGRYEQAIQYFK 386
+ AL+ MY+KCG+I+ AS VF + +++++WT+MI G A HG + ++ F
Sbjct: 510 -----PVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFN 564
Query: 387 KMMYSGTEPDGTVFLAILTACWYSGQVKLALNFFDSMRFDYFIEPSVKHHTVVVNLLSRV 446
+M+ G +P+ ++AIL+AC + G V F+SM D+ I+P ++H+ +V+LL R
Sbjct: 565 QMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRA 624
Query: 447 GQDSQGYQ-----------------------NSQNSFTKL-----LQLKPKHPSSYVLLS 478
G + ++ +S KL L+L P P++Y+ LS
Sbjct: 625 GLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLS 684
Query: 479 NIYAAEGRWKDVARVRTLMQRRSIKKDPGWSYIEVNGHVHRFEAG--GHKLAKEIHSKLE 536
NIYA G+W++ +R M+ R++ K+ G S+IEV +H+F G H A +I+ +L+
Sbjct: 685 NIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELD 744
Query: 537 DIMAGAREQGYMPGTEWVLHNIKEEKEEA-----LGCHSEKLALAFGLIQTTPGTTIKIV 591
++ + GY+P T+ VLH ++EE +EA L HSEK+A+AFGLI T+ +++
Sbjct: 745 RLITEIKRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRPVRVF 804
Query: 592 KKLTICGDCHSLMKYASKISQREIVLRD-TRFHYFKDGTCSCRDYW 636
K L +CGDCH+ MKY S +S REIVLRD RFH+FKDG CSC DYW
Sbjct: 805 KNLRVCGDCHNAMKYISTVSGREIVLRDLNRFHHFKDGKCSCNDYW 850
Score = 110 bits (276), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 96/438 (21%), Positives = 188/438 (42%), Gaps = 51/438 (11%)
Query: 24 KPSNNITETHIISLIHSSNSTKQLRQIHAQIILHNLFASSRITTQLISSASLHKSIDYAL 83
+P +++T + ++ + + + +HA++I ++ S + LIS S A
Sbjct: 58 RPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAE 117
Query: 84 SIFD---HFTPKNLHIFNVLIRGLAENSHFQSCISHFVFMLRLSVRPNRLTYPFVSKSVA 140
+F+ F +++ ++ ++ N I FV L L + PN Y V ++ +
Sbjct: 118 DVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACS 177
Query: 141 SLSLLSLGRGLHCLIVKSG-VEYDAFVRVHLADMYVQLGKT-RGAFKVFDETPEKNKSES 198
+ + +GR ++K+G E D V L DM+V+ + A+KVFD+ E N
Sbjct: 178 NSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELN---- 233
Query: 199 VLLWNVLINGCSKIGYLRKAVELF--------------------------GMMPKKNVAS 232
V+ W ++I C ++G+ R+A+ F + K + S
Sbjct: 234 VVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHS 293
Query: 233 W-----------VSLIDGFMR---KGDLKKAGELFEQMPEKGVVSWTAMINGFSQNGE-A 277
W SL+D + + G + ++F++M + V+SWTA+I G+ +N A
Sbjct: 294 WAIRSGLVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLA 353
Query: 278 EKALAMFFQMLDAG-VRANDFTVVSALSACAKVGALEAGVRVHNYISCNDFGLKGAIGTA 336
+A+ +F +M+ G V N FT SA AC + G +V ++ +
Sbjct: 354 TEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANS 413
Query: 337 LVDMYAKCGNIEAASLVFGETKEKDLLTWTAMIWGLAIHGRYEQAIQYFKKMMYSGTEPD 396
++ M+ K +E A F EK+L+++ + G + +EQA + ++
Sbjct: 414 VISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVS 473
Query: 397 GTVFLAILTACWYSGQVK 414
F ++L+ G ++
Sbjct: 474 AFTFASLLSGVANVGSIR 491
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 78/372 (20%), Positives = 143/372 (38%), Gaps = 20/372 (5%)
Query: 19 IKSSHKPSNNITETHIISLIHSSNSTKQLRQIHAQIILHNLFASSRITTQLISSASLHKS 78
I H N+ T + + + + +Q+ Q L ++S + +IS
Sbjct: 364 ITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDR 423
Query: 79 IDYALSIFDHFTPKNLHIFNVLIRGLAENSHFQSCISHFVFMLRLSVRPNRLTYPFVSKS 138
++ A F+ + KNL +N + G N +F+ + + + T+ +
Sbjct: 424 MEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSG 483
Query: 139 VASLSLLSLGRGLHCLIVKSGVEYDAFVRVHLADMYVQLGKTRGAFKVFDETPEKNKSES 198
VA++ + G +H +VK G+ + V L MY + G A +VF+ +N
Sbjct: 484 VANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRN---- 539
Query: 199 VLLWNVLINGCSKIGYLRKAVELFGMM----PKKNVASWVSLIDGFMRKGDLKKAGELFE 254
V+ W +I G +K G+ + +E F M K N ++V+++ G + + F
Sbjct: 540 VISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFN 599
Query: 255 QMPEKGVVS-----WTAMINGFSQNGEAEKALAMFFQMLDAGVRANDFTVVSALSACAKV 309
M E + + M++ + G A M +A+ + L AC
Sbjct: 600 SMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTM---PFQADVLVWRTFLGACRVH 656
Query: 310 GALEAGVRVHNYISCNDFGLKGAIGTALVDMYAKCGNIEAASLVFGETKEKDLLTWTAMI 369
E G I D A L ++YA G E ++ + + KE++L+
Sbjct: 657 SNTELGKLAARKILELDPNEPAAY-IQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCS 715
Query: 370 W---GLAIHGRY 378
W G IH Y
Sbjct: 716 WIEVGDKIHKFY 727
>sp|Q9SI53|PP147_ARATH Pentatricopeptide repeat-containing protein At2g03880,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2
SV=1
Length = 630
Score = 311 bits (796), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 185/535 (34%), Positives = 286/535 (53%), Gaps = 74/535 (13%)
Query: 170 LADMYVQLGKTRGAFKVFDETPEKNKSESVLLWNVLINGCSKIGYLRKAVELFGMMPKKN 229
L +MYV+ A ++FD+ P++N V+ W +I+ SK +KA+EL +M + N
Sbjct: 102 LINMYVKFNLLNDAHQLFDQMPQRN----VISWTTMISAYSKCKIHQKALELLVLMLRDN 157
Query: 230 VASWV------------------------------------SLIDGFMRKGDLKKAGELF 253
V V +LID F + G+ + A +F
Sbjct: 158 VRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVF 217
Query: 254 EQMPEKGVVSWTAMINGFSQNGEAEKALAMFFQMLDAGVRANDFTVVSALSACAKVGALE 313
++M + W ++I GF+QN ++ AL +F +M AG A T+ S L AC + LE
Sbjct: 218 DEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLE 277
Query: 314 AGVRVHNYISCNDFGLKGAIGTALVDMYAKCGNIEAASLVFGETKEKDLLTWTAMIWGLA 373
G++ H +I D L + ALVDMY KCG++E A VF + KE+D++TW+ MI GLA
Sbjct: 278 LGMQAHVHIVKYDQDL--ILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLA 335
Query: 374 IHGRYEQAIQYFKKMMYSGTEPDGTVFLAILTACWYSGQVKLALNFFDSMRFDYFIEPSV 433
+G ++A++ F++M SGT+P+ + +L AC ++G ++ +F SM+ Y I+P
Sbjct: 336 QNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVR 395
Query: 434 KHHTVVVNLLSRVGQ---------------DSQGYQN-------------SQNSFTKLLQ 465
+H+ +++LL + G+ D+ ++ ++ + K++
Sbjct: 396 EHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIA 455
Query: 466 LKPKHPSSYVLLSNIYAAEGRWKDVARVRTLMQRRSIKKDPGWSYIEVNGHVHRFEAG-- 523
L P+ +Y LLSNIYA +W V +RT M+ R IKK+PG S+IEVN +H F G
Sbjct: 456 LDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDN 515
Query: 524 GHKLAKEIHSKLEDIMAGAREQGYMPGTEWVLHNIK-EEKEEALGCHSEKLALAFGLIQT 582
H E+ KL ++ GY+P T +VL +++ E+ E++L HSEKLALAFGL+
Sbjct: 516 SHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTL 575
Query: 583 TPGTTIKIVKKLTICGDCHSLMKYASKISQREIVLRD-TRFHYFKDGTCSCRDYW 636
I+I K L ICGDCH K ASK+ R IV+RD R+H+F+DG CSC DYW
Sbjct: 576 PIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630
Score = 134 bits (336), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 166/363 (45%), Gaps = 48/363 (13%)
Query: 79 IDYALSIFDHFTPKNLHIFNVLIRGLAENSHFQSCISHFVFMLRLSVRPNRLTYPFVSKS 138
++ A +FD +N+ + +I ++ Q + V MLR +VRPN TY V +S
Sbjct: 112 LNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRS 171
Query: 139 VASLSLLSLGRGLHCLIVKSGVEYDAFVRVHLADMYVQLGKTRGAFKVFDETPEKNKSES 198
+S + R LHC I+K G+E D FVR L D++ +LG+ A VFDE +
Sbjct: 172 CNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMV----TGD 224
Query: 199 VLLWNVLINGCSKIGYLRKAVELF------------------------------GMMPKK 228
++WN +I G ++ A+ELF GM
Sbjct: 225 AIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHV 284
Query: 229 NVASWV-------SLIDGFMRKGDLKKAGELFEQMPEKGVVSWTAMINGFSQNGEAEKAL 281
++ + +L+D + + G L+ A +F QM E+ V++W+ MI+G +QNG +++AL
Sbjct: 285 HIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEAL 344
Query: 282 AMFFQMLDAGVRANDFTVVSALSACAKVGALEAGVRVHNYISCNDFGLKGAIG--TALVD 339
+F +M +G + N T+V L AC+ G LE G + +G+ ++D
Sbjct: 345 KLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMK-KLYGIDPVREHYGCMID 403
Query: 340 MYAKCGNIEAASLVFGETK-EKDLLTWTAMIWGLAIHGRYEQAIQYFKKMMYSGTEPDGT 398
+ K G ++ A + E + E D +TW ++ + A KK++ E GT
Sbjct: 404 LLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGT 463
Query: 399 VFL 401
L
Sbjct: 464 YTL 466
Score = 83.6 bits (205), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 119/261 (45%), Gaps = 15/261 (5%)
Query: 36 SLIHSSNSTKQLRQIHAQIILHNLFASSRITTQLISSASLHKSIDYALSIFDHFTPKNLH 95
S++ S N +R +H II L + + + LI + + ALS+FD +
Sbjct: 167 SVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAI 226
Query: 96 IFNVLIRGLAENSHFQSCISHFVFMLRLSVRPNRLTYPFVSKSVASLSLLSLGRGLHCLI 155
++N +I G A+NS + F M R + T V ++ L+LL LG H I
Sbjct: 227 VWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHI 286
Query: 156 VKSGVEYDAFVRVHLADMYVQLGKTRGAFKVFDETPEKNKSESVLLWNVLINGCSKIGYL 215
VK + D + L DMY + G A +VF++ E++ V+ W+ +I+G ++ GY
Sbjct: 287 VK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERD----VITWSTMISGLAQNGYS 340
Query: 216 RKAVELFGMM----PKKNVASWVSLIDGFMRKGDLKKAGELFEQMPEKGVVS-----WTA 266
++A++LF M K N + V ++ G L+ F M + + +
Sbjct: 341 QEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGC 400
Query: 267 MINGFSQNGEAEKALAMFFQM 287
MI+ + G+ + A+ + +M
Sbjct: 401 MIDLLGKAGKLDDAVKLLNEM 421
Score = 38.1 bits (87), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/117 (18%), Positives = 53/117 (45%)
Query: 291 GVRANDFTVVSALSACAKVGALEAGVRVHNYISCNDFGLKGAIGTALVDMYAKCGNIEAA 350
G+ A+ T + C A+ G + ++ N + L++MY K + A
Sbjct: 56 GLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDA 115
Query: 351 SLVFGETKEKDLLTWTAMIWGLAIHGRYEQAIQYFKKMMYSGTEPDGTVFLAILTAC 407
+F + ++++++WT MI + +++A++ M+ P+ + ++L +C
Sbjct: 116 HQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSC 172
>sp|O23337|PP311_ARATH Pentatricopeptide repeat-containing protein At4g14820
OS=Arabidopsis thaliana GN=PCMP-H3 PE=2 SV=1
Length = 722
Score = 310 bits (793), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 189/661 (28%), Positives = 325/661 (49%), Gaps = 105/661 (15%)
Query: 81 YALSIFDHF-TPKNLHIFNVLIRGLAENSHFQSCISHFVFMLRLSVRPNRLTYPFVSKSV 139
YAL++F +P +FN +R L+ +S ++ I + + + R ++ ++ + K+V
Sbjct: 62 YALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAV 121
Query: 140 ASLSLLSLGRGLHCLIVKSGVEYDAFVRVHLADMYVQLGKTR------------------ 181
+ +S L G LH + K D FV DMY G+
Sbjct: 122 SKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWN 181
Query: 182 -------------GAFKVFDETPEKNKSESVLLWNVLINGCSKIGYLR------------ 216
AFK+F+E + N ++ +++ C + G +R
Sbjct: 182 TMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIEN 241
Query: 217 -----------------------KAVELFGMMPKKNVASWVSLIDGFMRKGDLKKAGELF 253
A E F M +N+ +++ G+ + G L A +F
Sbjct: 242 DVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIF 301
Query: 254 EQMPEKGVVSWTAMINGFSQNGEAEKALAMFFQMLDAGVRANDFTVVSALSACAKVGALE 313
+Q +K +V WT MI+ + ++ ++AL +F +M +G++ + ++ S +SACA +G L+
Sbjct: 302 DQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILD 361
Query: 314 AGVRVHNYISCNDFGLKGAIGTALVDMYAKCGNIEAASLVFGETKEKDLLTWTAMIWGLA 373
VH+ I N + +I AL++MYAKCG ++A VF + +++++W++MI L+
Sbjct: 362 KAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALS 421
Query: 374 IHGRYEQAIQYFKKMMYSGTEPDGTVFLAILTACWYSGQVKLALNFFDSMRFDYFIEPSV 433
+HG A+ F +M EP+ F+ +L C +SG V+ F SM +Y I P +
Sbjct: 422 MHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKL 481
Query: 434 KHHTVVVNLLSRVGQDSQGYQNSQN----------------------------SFTKLLQ 465
+H+ +V+L R + + ++ + ++L+
Sbjct: 482 EHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILE 541
Query: 466 LKPKHPSSYVLLSNIYAAEGRWKDVARVRTLMQRRSIKKDPGWSYIEVNGHVHRFEAGG- 524
L+P H + VL+SNIYA E RW+DV +R +M+ +++ K+ G S I+ NG H F G
Sbjct: 542 LEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDK 601
Query: 525 -HKLAKEIHSKLEDIMAGAREQGYMPGTEWVLHNIKEEKEEALGC-HSEKLALAFGLI-- 580
HK + EI++KL+++++ + GY+P VL +++EE+++ L HSEKLAL FGL+
Sbjct: 602 RHKQSNEIYAKLDEVVSKLKLAGYVPDCGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNE 661
Query: 581 ----QTTPGTTIKIVKKLTICGDCHSLMKYASKISQREIVLRD-TRFHYFKDGTCSCRDY 635
+ I+IVK L +C DCH K SK+ +REI++RD TRFH +K+G CSCRDY
Sbjct: 662 EKEEEKDSCGVIRIVKNLRVCEDCHLFFKLVSKVYEREIIVRDRTRFHCYKNGLCSCRDY 721
Query: 636 W 636
W
Sbjct: 722 W 722
Score = 80.5 bits (197), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 135/293 (46%), Gaps = 20/293 (6%)
Query: 32 THIISLIHSSNSTKQLRQIHAQIILHNLFASSRITTQLISSASLHKSIDYALSIFDHFTP 91
T ++++ + R+ ++ + NLF ++T ++S S +D A IFD
Sbjct: 251 TALVTMYAGAGCMDMAREFFRKMSVRNLF----VSTAMVSGYSKCGRLDDAQVIFDQTEK 306
Query: 92 KNLHIFNVLIRGLAENSHFQSCISHFVFMLRLSVRPNRLTYPFVSKSVASLSLLSLGRGL 151
K+L + +I E+ + Q + F M ++P+ ++ V + A+L +L + +
Sbjct: 307 KDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWV 366
Query: 152 HCLIVKSGVEYDAFVRVHLADMYVQLGKTRGAFKVFDETPEKNKSESVLLWNVLINGCSK 211
H I +G+E + + L +MY + G VF++ P +N V+ W+ +IN S
Sbjct: 367 HSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRN----VVSWSSMINALSM 422
Query: 212 IGYLRKAVELFGMMPKKNV----ASWVSLIDGFMRKGDLKKAGELFEQMPEKGVVS---- 263
G A+ LF M ++NV ++V ++ G G +++ ++F M ++ ++
Sbjct: 423 HGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLE 482
Query: 264 -WTAMINGFSQNGEAEKALAMFFQMLDAGVRANDFTVVSALSACAKVGALEAG 315
+ M++ F + +AL + M V +N S +SAC G LE G
Sbjct: 483 HYGCMVDLFGRANLLREALEVIESM---PVASNVVIWGSLMSACRIHGELELG 532
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 309 bits (792), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 203/645 (31%), Positives = 322/645 (49%), Gaps = 78/645 (12%)
Query: 65 ITTQLISSASLHKSIDYALSIFDHFTPKNLHIFNVLIRGLAENSHFQSCISHFVFMLRLS 124
++ L+ S + +D A +F+ K+ FN LI G ++ + I F+ M +
Sbjct: 186 VSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSG 245
Query: 125 VRPNRLTYPFVSKSVASLSLLSLGRGLHCLIVKSGVEYDAFVRVHLADMYVQLGKTRGAF 184
+P+ T+ V K+V L +LG+ LH L V +G DA V + D Y + +
Sbjct: 246 HQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETR 305
Query: 185 KVFDETPEKNKSESVLLWNVLINGCSK----------------IGYLRKAVELFGMMP-K 227
+FDE PE + + +NV+I+ S+ +G+ R+ M+
Sbjct: 306 MLFDEMPELD----FVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIA 361
Query: 228 KNVASWV----------------------SLIDGFMRKGDLKKAGELFEQMPEKGVVSWT 265
N++S SL+D + + ++A +F+ +P++ VSWT
Sbjct: 362 ANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWT 421
Query: 266 AMINGFSQNGEAEKALAMFFQMLDAGVRANDFTVVSALSACAKVGALEAGVRVHNYISCN 325
A+I+G+ Q G L +F +M + +RA+ T + L A A +L G ++H +I
Sbjct: 422 ALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFI-IR 480
Query: 326 DFGLKGAI-GTALVDMYAKCGNIEAASLVFGETKEKDLLTWTAMIWGLAIHGRYEQAIQY 384
L+ G+ LVDMYAKCG+I+ A VF E +++ ++W A+I A +G E AI
Sbjct: 481 SGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGA 540
Query: 385 FKKMMYSGTEPDGTVFLAILTACWYSGQVKLALNFFDSMRFDYFIEPSVKHHTVVVNLLS 444
F KM+ SG +PD L +LTAC + G V+ +F +M Y I P KH+ +++LL
Sbjct: 541 FAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLG 600
Query: 445 RVGQ--------DSQGYQNSQNSFTKLLQL---------------------KPKHPSSYV 475
R G+ D ++ + ++ +L K + ++YV
Sbjct: 601 RNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYV 660
Query: 476 LLSNIYAAEGRWKDVARVRTLMQRRSIKKDPGWSYIEVNGHVHRFEAGG--HKLAKEIHS 533
+SNIYAA G W+ V V+ M+ R IKK P +S++EVN +H F + H EI
Sbjct: 661 SMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVR 720
Query: 534 KLEDIMAGAREQGYMPGTEWVLHNIKEE-KEEALGCHSEKLALAFGLIQTTPGTTIKIVK 592
K+ ++ A +GY P T V+ ++ E+ K E+L HSE+LA+AF LI T G I ++K
Sbjct: 721 KINELTAEIEREGYKPDTSSVVQDVDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMK 780
Query: 593 KLTICGDCHSLMKYASKISQREIVLRDT-RFHYFKDGTCSCRDYW 636
L C DCH+ +K SKI +REI +RDT RFH+F +G CSC DYW
Sbjct: 781 NLRACRDCHAAIKLISKIVKREITVRDTSRFHHFSEGVCSCGDYW 825
Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/386 (25%), Positives = 161/386 (41%), Gaps = 51/386 (13%)
Query: 66 TTQLISSASLHKSIDYALSIFDHFTPKNLHIFNVLIRGLAENSHFQSCISHFVFMLRLS- 124
T +IS + A +FD + + + +L+ A NSHF F M R S
Sbjct: 82 TNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSS 141
Query: 125 -VRPNRLTYPFVSKSVASLSLLSLGRGLHCLIVKSGVEYDAFVRVH--LADMYVQLGKTR 181
P+ +T+ + + +H VK G + + F+ V L Y ++ +
Sbjct: 142 CTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLD 201
Query: 182 GAFKVFDETPEKNKSESVLLWNVLINGCSKIGYLRKAVELF------GMMPKKNVASWV- 234
A +F+E PEK+ + +N LI G K G +++ LF G P S V
Sbjct: 202 LACVLFEEIPEKDS----VTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVL 257
Query: 235 ------------------SLIDGFMRKGDLK--------------KAGELFEQMPEKGVV 262
S+ GF R + + LF++MPE V
Sbjct: 258 KAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFV 317
Query: 263 SWTAMINGFSQNGEAEKALAMFFQMLDAGVRANDFTVVSALSACAKVGALEAGVRVH--N 320
S+ +I+ +SQ + E +L F +M G +F + LS A + +L+ G ++H
Sbjct: 318 SYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQA 377
Query: 321 YISCNDFGLKGAIGTALVDMYAKCGNIEAASLVFGETKEKDLLTWTAMIWGLAIHGRYEQ 380
++ D L +G +LVDMYAKC E A L+F ++ ++WTA+I G G +
Sbjct: 378 LLATADSILH--VGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGA 435
Query: 381 AIQYFKKMMYSGTEPDGTVFLAILTA 406
++ F KM S D + F +L A
Sbjct: 436 GLKLFTKMRGSNLRADQSTFATVLKA 461
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 100/208 (48%), Gaps = 4/208 (1%)
Query: 203 NVLINGCSKIGYLRKAVELFGMMPKKNVASWVSLIDGFMRKGDLKKAGELFEQMPEKGVV 262
N ++ + G + A +++ MP KN S ++I G ++ GD+ A +LF+ MP++ VV
Sbjct: 52 NFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVV 111
Query: 263 SWTAMINGFSQNGEAEKALAMFFQMLDAG--VRANDFTVVSALSACAKVGALEAGVRVHN 320
+WT ++ +++N ++A +F QM + + T + L C A +VH
Sbjct: 112 TWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHA 171
Query: 321 YISCNDFGLKG--AIGTALVDMYAKCGNIEAASLVFGETKEKDLLTWTAMIWGLAIHGRY 378
+ F + L+ Y + ++ A ++F E EKD +T+ +I G G Y
Sbjct: 172 FAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLY 231
Query: 379 EQAIQYFKKMMYSGTEPDGTVFLAILTA 406
++I F KM SG +P F +L A
Sbjct: 232 TESIHLFLKMRQSGHQPSDFTFSGVLKA 259
>sp|Q9FX24|PPR71_ARATH Pentatricopeptide repeat-containing protein At1g34160
OS=Arabidopsis thaliana GN=PCMP-H68 PE=2 SV=2
Length = 581
Score = 308 bits (789), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 167/439 (38%), Positives = 262/439 (59%), Gaps = 43/439 (9%)
Query: 235 SLIDGFMRKGDLKKAGELFEQMPEKGVVSWTAMINGFSQNGEAEKALAMFFQMLDAGVRA 294
+L+D + + GDL A +LF++MP + V SW A+I G A +A+ ++ +M G+R
Sbjct: 149 TLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRR 208
Query: 295 NDFTVVSALSACAKVGALEAGVRV-HNYISCNDFGLKGAIGTALVDMYAKCGNIEAASLV 353
++ TVV+AL AC+ +G ++ G + H Y + N + A +DMY+KCG ++ A V
Sbjct: 209 SEVTVVAALGACSHLGDVKEGENIFHGYSNDNVI-----VSNAAIDMYSKCGFVDKAYQV 263
Query: 354 FGE-TKEKDLLTWTAMIWGLAIHGRYEQAIQYFKKMMYSGTEPDGTVFLAILTACWYSGQ 412
F + T +K ++TW MI G A+HG +A++ F K+ +G +PD +LA LTAC ++G
Sbjct: 264 FEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGL 323
Query: 413 VKLALNFFDSMRFDYFIEPSVKHHTVVVNLLSRVGQDSQGY------------------- 453
V+ L+ F++M +E ++KH+ VV+LLSR G+ + +
Sbjct: 324 VEYGLSVFNNMACK-GVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLL 382
Query: 454 ---------QNSQNSFTKLLQLKPKHPSSYVLLSNIYAAEGRWKDVARVRTLMQRRSIKK 504
+ ++ + ++ ++ + +VLLSN+YAA+GRWKDV RVR M+ + +KK
Sbjct: 383 GASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDMESKQVKK 442
Query: 505 DPGWSYIEVNGHVHRF--EAGGHKLAKEIHSKLEDIMAGAREQGYMPGTEWVLHNI-KEE 561
PG SYIE G +H F H+ +EI+ K+++I RE GY+ T VLH+I +EE
Sbjct: 443 IPGLSYIEAKGTIHEFYNSDKSHEQWREIYEKIDEIRFKIREDGYVAQTGLVLHDIGEEE 502
Query: 562 KEEALGCHSEKLALAFGLIQTTPG---TTIKIVKKLTICGDCHSLMKYASKISQREIVLR 618
KE AL HSEKLA+A+GL+ + ++++ L ICGDCH + K+ SKI +REI++R
Sbjct: 503 KENALCYHSEKLAVAYGLMMMDGADEESPVRVINNLRICGDCHVVFKHISKIYKREIIVR 562
Query: 619 D-TRFHYFKDGTCSCRDYW 636
D RFH FKDG+CSCRD+W
Sbjct: 563 DRVRFHRFKDGSCSCRDFW 581
Score = 137 bits (344), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 109/419 (26%), Positives = 192/419 (45%), Gaps = 51/419 (12%)
Query: 29 ITETHIISLIHSSNSTKQLRQIHAQIILHNLFASSRITTQLISSASLHK--SIDYALSIF 86
+ ++ ++I S Q++Q+ + + F SS + ++L+ ++ + +A+ IF
Sbjct: 1 MARVYMETMIQKCVSFSQIKQLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAVQIF 60
Query: 87 DHFTPKNL-HIFNVLIRGLAENSHFQSCISHFVFMLRLS------VRPNRLTYPFVSKSV 139
+ PK L + +N +IRG A +SH S + ML+ S R + LT F K+
Sbjct: 61 -RYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKAC 119
Query: 140 ASLSLLSLGRGLHCLIVKSGVEYDAFVRVHLADMYVQLGKTRGAFKVFDETPEKNKSESV 199
A S LHC I + G+ D+ + L D Y + G A+K+FDE P ++ V
Sbjct: 120 ARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRD----V 175
Query: 200 LLWNVLING-----------------------------------CSKIGYLRKAVELFGM 224
WN LI G CS +G +++ +F
Sbjct: 176 ASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHG 235
Query: 225 MPKKNVASWVSLIDGFMRKGDLKKAGELFEQMP-EKGVVSWTAMINGFSQNGEAEKALAM 283
NV + ID + + G + KA ++FEQ +K VV+W MI GF+ +GEA +AL +
Sbjct: 236 YSNDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEI 295
Query: 284 FFQMLDAGVRANDFTVVSALSACAKVGALEAGVRVHNYISCNDFGLKGAIGTALVDMYAK 343
F ++ D G++ +D + ++AL+AC G +E G+ V N ++C +VD+ ++
Sbjct: 296 FDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACKGVERNMKHYGCVVDLLSR 355
Query: 344 CGNI-EAASLVFGETKEKDLLTWTAMIWGLAIHGRYEQAIQYFKKMMYSGTEPDGTVFL 401
G + EA ++ + D + W +++ I+ E A +++ G DG L
Sbjct: 356 AGRLREAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVL 414
Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 97/217 (44%), Gaps = 11/217 (5%)
Query: 244 GDLKKAGELFEQMPEKGVVSWTAMINGFSQNGEAEKALAMFFQMLD------AGVRANDF 297
GDL A ++F +P+ W A+I GF+ + A + + ML A R +
Sbjct: 51 GDLSFAVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDAL 110
Query: 298 TVVSALSACAKVGALEAGVRVHNYISCNDFGLKGAIGTALVDMYAKCGNIEAASLVFGET 357
T L ACA+ A ++H I+ + T L+D Y+K G++ +A +F E
Sbjct: 111 TCSFTLKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEM 170
Query: 358 KEKDLLTWTAMIWGLAIHGRYEQAIQYFKKMMYSGTEPDGTVFLAILTACWYSGQVKLAL 417
+D+ +W A+I GL R +A++ +K+M G +A L AC + G VK
Sbjct: 171 PVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGE 230
Query: 418 NFFDSMRFDYFIEPSVKHHTVVVNLLSRVGQDSQGYQ 454
N F D I + +++ S+ G + YQ
Sbjct: 231 NIFHGYSNDNVIVSN-----AAIDMYSKCGFVDKAYQ 262
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 307 bits (786), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 206/674 (30%), Positives = 335/674 (49%), Gaps = 90/674 (13%)
Query: 45 KQLRQIHAQIILHNLFA-SSRITTQLISSASLHKSIDYALSIFDHFTPKNLHIFNVLIRG 103
K+ R++H +I L I L++ + SI A +F T K+ +N +I G
Sbjct: 330 KKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITG 389
Query: 104 LAENSHFQSCISHFVFMLRLSVRPNRLTYPFVSKSVASLSLLSLGRGLHCLIVKSGVEYD 163
L +N F + + M R + P T S ASL LG+ +H +K G++ +
Sbjct: 390 LDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLN 449
Query: 164 AFVRVHLADMYVQLGKTRGAFKVFDETPEKNKSESVLLWNVLINGCSK------------ 211
V L +Y + G K+F PE ++ + WN +I ++
Sbjct: 450 VSVSNALMTLYAETGYLNECRKIFSSMPEHDQ----VSWNSIIGALARSERSLPEAVVCF 505
Query: 212 --------------------------IGYLRKAVELFGMMPKKNVASWVS----LIDGFM 241
G L K ++ G+ K N+A + LI +
Sbjct: 506 LNAQRAGQKLNRITFSSVLSAVSSLSFGELGK--QIHGLALKNNIADEATTENALIACYG 563
Query: 242 RKGDLKKAGELFEQMPEK-GVVSWTAMINGFSQNGEAEKALAMFFQMLDAGVRANDFTVV 300
+ G++ ++F +M E+ V+W +MI+G+ N KAL + + ML G R + F
Sbjct: 564 KCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYA 623
Query: 301 SALSACAKVGALEAGVRVH--NYISCNDFGLKGAIGTALVDMYAKCGNIEAASLVFGETK 358
+ LSA A V LE G+ VH + +C + + +G+ALVDMY+KCG ++ A F
Sbjct: 624 TVLSAFASVATLERGMEVHACSVRACLESDV--VVGSALVDMYSKCGRLDYALRFFNTMP 681
Query: 359 EKDLLTWTAMIWGLAIHGRYEQAIQYFKKMMYSG-TEPDGTVFLAILTACWYSGQVKLAL 417
++ +W +MI G A HG+ E+A++ F+ M G T PD F+ +L+AC ++G ++
Sbjct: 682 VRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGF 741
Query: 418 NFFDSMRFDYFIEPSVKHHTVVVNLLSRVGQ----------------------------- 448
F+SM Y + P ++H + + ++L R G+
Sbjct: 742 KHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCR 801
Query: 449 -DSQGYQNSQNSFTKLLQLKPKHPSSYVLLSNIYAAEGRWKDVARVRTLMQRRSIKKDPG 507
+ + + + + L QL+P++ +YVLL N+YAA GRW+D+ + R M+ +KK+ G
Sbjct: 802 ANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAG 861
Query: 508 WSYIEVNGHVHRFEAG--GHKLAKEIHSKLEDIMAGAREQGYMPGTEWVLHNIKEE-KEE 564
+S++ + VH F AG H A I+ KL+++ R+ GY+P T + L+++++E KEE
Sbjct: 862 YSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAGYVPQTGFALYDLEQENKEE 921
Query: 565 ALGCHSEKLALAFGL-IQTTPGTTIKIVKKLTICGDCHSLMKYASKISQREIVLRDT-RF 622
L HSEKLA+AF L Q + I+I+K L +CGDCHS KY SKI R+I+LRD+ RF
Sbjct: 922 ILSYHSEKLAVAFVLAAQRSSTLPIRIMKNLRVCGDCHSAFKYISKIEGRQIILRDSNRF 981
Query: 623 HYFKDGTCSCRDYW 636
H+F+DG CSC D+W
Sbjct: 982 HHFQDGACSCSDFW 995
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 101/184 (54%), Gaps = 4/184 (2%)
Query: 228 KNVASWVSLIDGFMRKGDLKKAGELFEQMPEKGVVSWTAMINGFSQNGEAEKALAMFFQM 287
K+V +LI+ ++ GD A ++F++MP + VSW +++G+S+NGE ++AL M
Sbjct: 34 KDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDM 93
Query: 288 LDAGVRANDFTVVSALSACAKVGALEA--GVRVHNYISCNDFGLKGAIGTALVDMYAKC- 344
+ G+ +N + VS L AC ++G++ G ++H + + + + L+ MY KC
Sbjct: 94 VKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCI 153
Query: 345 GNIEAASLVFGETKEKDLLTWTAMIWGLAIHGRYEQAIQYFKKMMYSGTEPDGTVFLAIL 404
G++ A FG+ + K+ ++W ++I + G A + F M Y G+ P F +++
Sbjct: 154 GSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLV 213
Query: 405 -TAC 407
TAC
Sbjct: 214 TTAC 217
Score = 89.4 bits (220), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 92/381 (24%), Positives = 158/381 (41%), Gaps = 65/381 (17%)
Query: 82 ALSIFDHFTPKNLHIFNVLIRGLAENSHFQSCISHFVFMLRLSVRPNRLTYPFVS----- 136
A +FD +N + ++ G + N + + M++ + N+ Y FVS
Sbjct: 55 ARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQ--YAFVSVLRAC 112
Query: 137 KSVASLSLLSLGRGLHCLIVKSGVEYDAFVRVHLADMYVQ-LGKTRGAFKVFDETPEKNK 195
+ + S+ +L GR +H L+ K DA V L MY + +G A F + KN
Sbjct: 113 QEIGSVGIL-FGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNS 171
Query: 196 SESVLLWNVLINGCSKIGYLRKAVELFGMM------------------------PKKNVA 231
+ WN +I+ S+ G R A +F M P +
Sbjct: 172 ----VSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLL 227
Query: 232 SWV-----------------SLIDGFMRKGDLKKAGELFEQMPEKGVVSWTAMINGFSQN 274
+ L+ F + G L A ++F QM + V+ ++ G +
Sbjct: 228 EQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQ 287
Query: 275 GEAEKALAMFFQMLDAGVRANDFTVVSALS-----ACAKVGALEAGVRVHNYISCN---D 326
E+A +F M ++ + + + V LS + A+ L+ G VH ++ D
Sbjct: 288 KWGEEATKLFMDM-NSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVD 346
Query: 327 FGLKGAIGTALVDMYAKCGNIEAASLVFGETKEKDLLTWTAMIWGLAIHGRYEQAIQYFK 386
F + IG LV+MYAKCG+I A VF +KD ++W +MI GL +G + +A++ +K
Sbjct: 347 FMV--GIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYK 404
Query: 387 KMMYSGTEPDGTVFLAILTAC 407
M P ++ L++C
Sbjct: 405 SMRRHDILPGSFTLISSLSSC 425
Score = 86.7 bits (213), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 90/373 (24%), Positives = 151/373 (40%), Gaps = 51/373 (13%)
Query: 48 RQIHAQIILHNLFASSRITTQLISSA-SLHKSIDYALSIFDHFTPKNLHIFNVLIRGLAE 106
RQIH + + + ++ LIS S+ YAL F KN +N +I ++
Sbjct: 124 RQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQ 183
Query: 107 NSHFQSCISHFVFMLRLSVRPNRLTYPFVSKSVASLSL--LSLGRGLHCLIVKSGVEYDA 164
+S F M RP T+ + + SL+ + L + C I KSG+ D
Sbjct: 184 AGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDL 243
Query: 165 FVRVHLADMYVQLGKTRGAFKVFDETPEKNKSESVLLWNVLINGCSKIGYLRKAVELFGM 224
FV L + + G A KVF++ +N + N L+ G + + +A +LF
Sbjct: 244 FVGSGLVSAFAKSGSLSYARKVFNQMETRN----AVTLNGLMVGLVRQKWGEEATKLFMD 299
Query: 225 M------------------PKKNVASWVSLIDG--------------------------F 240
M P+ ++A V L G +
Sbjct: 300 MNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMY 359
Query: 241 MRKGDLKKAGELFEQMPEKGVVSWTAMINGFSQNGEAEKALAMFFQMLDAGVRANDFTVV 300
+ G + A +F M +K VSW +MI G QNG +A+ + M + FT++
Sbjct: 360 AKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLI 419
Query: 301 SALSACAKVGALEAGVRVHNYISCNDFGLKGAIGTALVDMYAKCGNIEAASLVFGETKEK 360
S+LS+CA + + G ++H L ++ AL+ +YA+ G + +F E
Sbjct: 420 SSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEH 479
Query: 361 DLLTWTAMIWGLA 373
D ++W ++I LA
Sbjct: 480 DQVSWNSIIGALA 492
Score = 86.7 bits (213), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 99/428 (23%), Positives = 173/428 (40%), Gaps = 55/428 (12%)
Query: 30 TETHIISLIHSSNS-----TKQLRQIHAQIILHNLFASSRITTQLISSASLHKSIDYALS 84
TE SL+ ++ S + L QI I L + + L+S+ + S+ YA
Sbjct: 205 TEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARK 264
Query: 85 IFDHFTPKNLHIFNVLIRGLAENSHFQSCISHFVFMLRL-SVRPNR---LTYPFVSKSVA 140
+F+ +N N L+ GL + F+ M + V P L F S+A
Sbjct: 265 VFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLA 324
Query: 141 SLSLLSLGRGLHCLIVKSG-VEYDAFVRVHLADMYVQLGKTRGAFKVFDETPEKNKSESV 199
L GR +H ++ +G V++ + L +MY + G A +VF +K+
Sbjct: 325 EEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDS---- 380
Query: 200 LLWNVLINGCSKIGYLRKAVELFGMMPKK------------------------------- 228
+ WN +I G + G +AVE + M +
Sbjct: 381 VSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGE 440
Query: 229 --------NVASWVSLIDGFMRKGDLKKAGELFEQMPEKGVVSWTAMINGFSQNGEA-EK 279
NV+ +L+ + G L + ++F MPE VSW ++I +++ + +
Sbjct: 441 SLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPE 500
Query: 280 ALAMFFQMLDAGVRANDFTVVSALSACAKVGALEAGVRVHNYISCNDFGLKGAIGTALVD 339
A+ F AG + N T S LSA + + E G ++H N+ + AL+
Sbjct: 501 AVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIA 560
Query: 340 MYAKCGNIEAASLVFGETKE-KDLLTWTAMIWGLAIHGRYEQAIQYFKKMMYSGTEPDGT 398
Y KCG ++ +F E +D +TW +MI G + +A+ M+ +G D
Sbjct: 561 CYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSF 620
Query: 399 VFLAILTA 406
++ +L+A
Sbjct: 621 MYATVLSA 628
Score = 67.0 bits (162), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 124/288 (43%), Gaps = 54/288 (18%)
Query: 148 GRGLHCLIVKSGVEYDAFVRVHLADMYVQLGKTRGAFKVFDETPEKNKSESVLLWNVLIN 207
R H + K+ ++ D ++ +L + Y++ G + A KVFDE P +N + W +++
Sbjct: 20 ARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRN----CVSWACIVS 75
Query: 208 GCSKIGYLRKAVELFGMMPKKNVAS----WVSL-----------------IDGFMRK--- 243
G S+ G ++A+ M K+ + S +VS+ I G M K
Sbjct: 76 GYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSY 135
Query: 244 ------------------GDLKKAGELFEQMPEKGVVSWTAMINGFSQNGEAEKALAMFF 285
G + A F + K VSW ++I+ +SQ G+ A +F
Sbjct: 136 AVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFS 195
Query: 286 QMLDAGVRANDFTVVSAL-SACAKVGALEAGVRVHNYISC--NDFGLKGA--IGTALVDM 340
M G R ++T S + +AC+ E VR+ I C GL +G+ LV
Sbjct: 196 SMQYDGSRPTEYTFGSLVTTACSLT---EPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSA 252
Query: 341 YAKCGNIEAASLVFGETKEKDLLTWTAMIWGLAIHGRYEQAIQYFKKM 388
+AK G++ A VF + + ++ +T ++ GL E+A + F M
Sbjct: 253 FAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDM 300
Score = 42.4 bits (98), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 105/249 (42%), Gaps = 15/249 (6%)
Query: 34 IISLIHSSNSTKQLRQIHAQIILHNLFASSRITTQLISSASLHKSIDYALSIFDHFTPKN 93
++S S + ++ ++HA + L + + + L+ S +DYAL F+ +N
Sbjct: 625 VLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRN 684
Query: 94 LHIFNVLIRGLAENSHFQSCISHFVFM-LRLSVRPNRLTYPFVSKSVASLSLLSLGRGLH 152
+ +N +I G A + + + F M L P+ +T+ V + + LL G
Sbjct: 685 SYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHF 744
Query: 153 CLIVKSGVEYDAFVRV-HLADMYVQLGKTRGAFKVFDETPEKNKSESVLLWNVLINGCS- 210
+ S Y R+ H + M LG+ K+ D + +VL+W ++ C
Sbjct: 745 ESMSDS---YGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCR 801
Query: 211 ----KIGYLRKAVELFGMMPKKNVASWVSLIDGFMRKG---DLKKAGELFE--QMPEKGV 261
K +KA E+ + +N ++V L + + G DL KA + + + ++
Sbjct: 802 ANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAG 861
Query: 262 VSWTAMING 270
SW M +G
Sbjct: 862 YSWVTMKDG 870
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.135 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 226,187,223
Number of Sequences: 539616
Number of extensions: 9098356
Number of successful extensions: 29351
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 355
Number of HSP's successfully gapped in prelim test: 81
Number of HSP's that attempted gapping in prelim test: 21943
Number of HSP's gapped (non-prelim): 2358
length of query: 636
length of database: 191,569,459
effective HSP length: 124
effective length of query: 512
effective length of database: 124,657,075
effective search space: 63824422400
effective search space used: 63824422400
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)