Your job contains 1 sequence.
>006674
MITWKDLYLVLTAVVPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS
TNDPYAMNFRFIAADTLQKIIMLFVLGIWTNFTKNGSLEWMITIFSLSTLPNTLVMGIPL
LIAMYGEYSGSLMVQVVVLQCIIWYTLLLFLFEYRGAKMLIMEQFPETAASIVSFKVDSD
VVSLDGRDFLETDAEIGDDGKLHVTVRKSNASRRSLGPCSLPALTPRPSNLTGAEIYSLS
SSRNPTPRGSNFNHSDFYSMMGVQGFPGGRLSNFGPADMYSVQSSRGPTPRPSNFEENSG
QALSSPRFGFYPAQTVPTSYPAPNPEFSSTLTKNTSKTVQNNQQQQQQQQQQQQQQNVNV
NSKANHDAKELHMFVWSSSTSPVSEGGGLHVFGGTDFGASEHSGRSDQGAKEIRMLVADH
PENGENKALPQNGDFGREDFRFAGRGEGEDDQMDHKEGGPAELNKLGSNSTAELHPKATG
AADAGMGKHMPPASVMTRLILIMVWRKLIRNPNTYSSLIGLVWSLIAFRWHVSMPKIIEK
SISILSDAGLGMAMFSLGLFMALQPKIIACGNSVATFSMAVRFLTGPAVMAAASIAVGLR
GTLLHVAIVQAALPQGIVPFVFAKEYNVHPAILSTA
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 006674
(636 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2038781 - symbol:PIN4 "AT2G01420" species:3702... 1379 1.3e-222 2
TAIR|locus:2035037 - symbol:PIN1 "AT1G73590" species:3702... 1191 1.1e-183 2
UNIPROTKB|Q5SMQ9 - symbol:PIN1 "Auxin efflux carrier comp... 1121 6.1e-183 2
TAIR|locus:2175559 - symbol:EIR1 "AT5G57090" species:3702... 1653 5.0e-170 1
TAIR|locus:2013975 - symbol:PIN3 "AT1G70940" species:3702... 1581 2.2e-162 1
TAIR|locus:2201225 - symbol:PIN7 "AT1G23080" species:3702... 1424 9.3e-146 1
TAIR|locus:2025312 - symbol:PIN6 "AT1G77110" species:3702... 750 5.4e-130 2
TAIR|locus:2147835 - symbol:PIN8 "AT5G15100" species:3702... 448 5.0e-87 2
TAIR|locus:2171392 - symbol:PIN5 "AT5G16530" species:3702... 447 1.9e-83 2
UNIPROTKB|Q721Y6 - symbol:LMOf2365_0848 "Putative membran... 108 6.9e-06 2
UNIPROTKB|Q5LLS8 - symbol:SPO3843 "Malonate transporter, ... 89 1.4e-05 2
TIGR_CMR|SPO_3843 - symbol:SPO_3843 "malonate transporter... 89 1.4e-05 2
UNIPROTKB|Q5LPV5 - symbol:SPO2744 "Malonate transporter, ... 93 5.3e-05 2
TIGR_CMR|SPO_2744 - symbol:SPO_2744 "malonate transporter... 93 5.3e-05 2
TIGR_CMR|SO_3461 - symbol:SO_3461 "transporter, putative"... 94 9.2e-05 2
TIGR_CMR|SPO_3413 - symbol:SPO_3413 "auxin efflux carrier... 95 0.00035 2
UNIPROTKB|P0AA49 - symbol:yfdV "YfdV AEC Transporter" spe... 81 0.00073 2
>TAIR|locus:2038781 [details] [associations]
symbol:PIN4 "AT2G01420" species:3702 "Arabidopsis
thaliana" [GO:0005215 "transporter activity" evidence=ISS]
[GO:0009672 "auxin:hydrogen symporter activity" evidence=ISS]
[GO:0009926 "auxin polar transport" evidence=ISS;RCA;IMP]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0055085
"transmembrane transport" evidence=IEA] [GO:0048364 "root
development" evidence=IMP] [GO:0007389 "pattern specification
process" evidence=IGI;RCA] [GO:0000271 "polysaccharide biosynthetic
process" evidence=RCA] [GO:0008361 "regulation of cell size"
evidence=RCA] [GO:0009825 "multidimensional cell growth"
evidence=RCA] [GO:0009932 "cell tip growth" evidence=RCA]
[GO:0010015 "root morphogenesis" evidence=RCA] [GO:0010218
"response to far red light" evidence=RCA] [GO:0010817 "regulation
of hormone levels" evidence=RCA] [GO:0040007 "growth" evidence=RCA]
[GO:0043481 "anthocyanin accumulation in tissues in response to UV
light" evidence=RCA] [GO:0048765 "root hair cell differentiation"
evidence=RCA] [GO:0048767 "root hair elongation" evidence=RCA]
[GO:0071555 "cell wall organization" evidence=RCA]
InterPro:IPR004776 Pfam:PF03547 GO:GO:0016021 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0009734 GO:GO:0009926 GO:GO:0055085
GO:GO:0048364 EMBL:AC006200 GO:GO:0007389 EMBL:AC005560
HOGENOM:HOG000238224 KO:K13947 InterPro:IPR014024
TIGRFAMs:TIGR00946 EMBL:AF087016 EMBL:AY091009 EMBL:BT008691
IPI:IPI00527431 IPI:IPI00531366 PIR:E84424 RefSeq:NP_565261.1
RefSeq:NP_849923.1 UniGene:At.24881 ProteinModelPortal:Q8RWZ6
PaxDb:Q8RWZ6 PRIDE:Q8RWZ6 EnsemblPlants:AT2G01420.2 GeneID:814670
KEGG:ath:AT2G01420 GeneFarm:3022 TAIR:At2g01420 eggNOG:NOG283588
InParanoid:Q8RWZ6 OMA:KASHDAK PhylomeDB:Q8RWZ6
ProtClustDB:CLSN2687655 Genevestigator:Q8RWZ6 GermOnline:AT2G01420
Uniprot:Q8RWZ6
Length = 616
Score = 1379 (490.5 bits), Expect = 1.3e-222, Sum P(2) = 1.3e-222
Identities = 277/331 (83%), Positives = 291/331 (87%)
Query: 1 MITWKDLYLVLTAVVPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS 60
MITW DLY VLTAVVPLYVAMILAYGSV+WWKIFSPDQCSGINRFVAIFAVPLLSFHFIS
Sbjct: 1 MITWHDLYTVLTAVVPLYVAMILAYGSVQWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS 60
Query: 61 TNDPYAMNFRFIAADTLQKIIMLFVLGIWTNFTKNGSLEWMITIFSLSTLPNTLVMGIPL 120
TNDPYAMNFRF+AADTLQKIIML +L +W N TKNGSLEWMITIFSLSTLPNTLVMGIPL
Sbjct: 61 TNDPYAMNFRFVAADTLQKIIMLVLLALWANLTKNGSLEWMITIFSLSTLPNTLVMGIPL 120
Query: 121 LIAMYGEYSGSLMVQVVVLQCIIWYTLLLFLFEYRGAKMLIMEQFPETAASIVSFKVDSD 180
LIAMYG Y+GSLMVQVVVLQCIIWYTLLLFLFEYRGAK+LIMEQFPET ASIVSFKV+SD
Sbjct: 121 LIAMYGTYAGSLMVQVVVLQCIIWYTLLLFLFEYRGAKLLIMEQFPETGASIVSFKVESD 180
Query: 181 VVSLDGRDFLETDAEIGDDGKLHVTVRKSNASRRSLGPCSLPALTPRPSNLTGAEIYSLS 240
VVSLDG DFLETDAEIG+DGKLHVTVRKSNASRRSL +TPRPSNLTGAEIYSLS
Sbjct: 181 VVSLDGHDFLETDAEIGNDGKLHVTVRKSNASRRSL------MMTPRPSNLTGAEIYSLS 234
Query: 241 SSRNPTPRGSNFNHSDFYSMMGVQGFPGGRLSNFGPADMYSVQSSRGPTPRPSNFEENSG 300
S TPRGSNFNHSDFYS+MG FPGGRLSNFGPAD+YSVQSSRGPTPRPSNFEEN+
Sbjct: 235 S----TPRGSNFNHSDFYSVMG---FPGGRLSNFGPADLYSVQSSRGPTPRPSNFEENNA 287
Query: 301 QALSSPRFGFYPAQTVPT--SYPAPNPEFSS 329
F +VP SYPAPNPEFS+
Sbjct: 288 VKYG---FYNNTNSSVPAAGSYPAPNPEFST 315
Score = 793 (284.2 bits), Expect = 1.3e-222, Sum P(2) = 1.3e-222
Identities = 168/247 (68%), Positives = 191/247 (77%)
Query: 391 VFGGTDFGASEH--SGRSDQGAKEIRMLVADHPENGENKALPQNGDFGREDFRFAGRGEG 448
VFGG GA ++ + +S+QGAKEIRM+V+D P N G +D GEG
Sbjct: 363 VFGG---GAGDNVATEQSEQGAKEIRMVVSDQPRKS-------NARGGGDDIGGLDSGEG 412
Query: 449 EDDQMDHKEGGPAELNKLGSNSTAELHPKATGAADAGMGKHMPPASVMTRLILIMVWRKL 508
E + E A LNK+GSNSTAEL A G G HMPP SVMTRLILIMVWRKL
Sbjct: 413 EREI----EKATAGLNKMGSNSTAELEA-AGGDGGGNNGTHMPPTSVMTRLILIMVWRKL 467
Query: 509 IRNPNTYSSLIGLVWSLIAFRWHVSMPKIIEKSISILSDAGLGMAMFSLGLFMALQPKII 568
IRNPNTYSSLIGL+W+L+A+RWHV+MPKI+++SISILSDAGLGMAMFSLGLFMALQPKII
Sbjct: 468 IRNPNTYSSLIGLIWALVAYRWHVAMPKILQQSISILSDAGLGMAMFSLGLFMALQPKII 527
Query: 569 ACGNSVATFSMAVRFLTGPAVMAAASIAVGLRGTLLHVAIVQAALPQGIVPFVFAKEYNV 628
ACGNSVATF+MAVRF+TGPA+MA A IA+GL G LL +AIVQAALPQGIVPFVFAKEYNV
Sbjct: 528 ACGNSVATFAMAVRFITGPAIMAVAGIAIGLHGDLLRIAIVQAALPQGIVPFVFAKEYNV 587
Query: 629 HPAILST 635
HP ILST
Sbjct: 588 HPTILST 594
Score = 449 (163.1 bits), Expect = 1.9e-42, P = 1.9e-42
Identities = 117/237 (49%), Positives = 142/237 (59%)
Query: 242 SRNPTPRGSNFNHSDFYSMMGVQGFPGGRLSNFGPADMYSVQSSRGPTPRPSNFEENSGQ 301
S + TPRGSNFNHSDFYS+MG FPGGRLSNFGPAD+YSVQSSRGPTPRPSNFEEN+
Sbjct: 232 SLSSTPRGSNFNHSDFYSVMG---FPGGRLSNFGPADLYSVQSSRGPTPRPSNFEENN-- 286
Query: 302 ALSSPRFGFY--PAQTVPT--SYPAPNPEFSSTLTKNTSKTXXXXXXXXXXXXXXXXXXX 357
+ ++GFY +VP SYPAPNPEFS+ +T
Sbjct: 287 ---AVKYGFYNNTNSSVPAAGSYPAPNPEFSTGTGVSTKPNKIPKENQQQLQEKD----- 338
Query: 358 XXXXSKANHDAKELHMFVWSSSTSPVSEGGGLHVFGGTDFGASEHSGRSDQGAKEIRMLV 417
SKA+HDAKELHMFVWSSS SPVS+ VFGG G + + +S+QGAKEIRM+V
Sbjct: 339 ----SKASHDAKELHMFVWSSSASPVSD-----VFGG-GAGDNVATEQSEQGAKEIRMVV 388
Query: 418 ADHPENGENKALPQNGDFGREDFRFAGRGEGEDDQMD---HKEGG--PAELNKLGSN 469
+D P ++ A D G D +G GE E ++ +K G AEL G +
Sbjct: 389 SDQPR--KSNARGGGDDIGGLD---SGEGEREIEKATAGLNKMGSNSTAELEAAGGD 440
>TAIR|locus:2035037 [details] [associations]
symbol:PIN1 "AT1G73590" species:3702 "Arabidopsis
thaliana" [GO:0005215 "transporter activity" evidence=ISS;TAS]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0055085
"transmembrane transport" evidence=IEA] [GO:0048367 "shoot system
development" evidence=IMP] [GO:0016020 "membrane" evidence=ISS]
[GO:0009925 "basal plasma membrane" evidence=IDA] [GO:0048825
"cotyledon development" evidence=IGI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0045177 "apical part of cell" evidence=IDA]
[GO:0009640 "photomorphogenesis" evidence=RCA;TAS] [GO:0009630
"gravitropism" evidence=IMP] [GO:0009926 "auxin polar transport"
evidence=RCA;IMP] [GO:0010051 "xylem and phloem pattern formation"
evidence=RCA;IMP] [GO:0010338 "leaf formation" evidence=IGI]
[GO:0010358 "leaf shaping" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0009505 "plant-type cell wall" evidence=IDA] [GO:0009790
"embryo development" evidence=IMP] [GO:0009908 "flower development"
evidence=IMP] [GO:0010229 "inflorescence development" evidence=IMP]
[GO:0048826 "cotyledon morphogenesis" evidence=IMP] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0008361 "regulation of cell size"
evidence=RCA] [GO:0009165 "nucleotide biosynthetic process"
evidence=RCA] [GO:0009624 "response to nematode" evidence=RCA]
[GO:0009637 "response to blue light" evidence=RCA] [GO:0009733
"response to auxin stimulus" evidence=RCA] [GO:0009855
"determination of bilateral symmetry" evidence=RCA] [GO:0009887
"organ morphogenesis" evidence=RCA] [GO:0009944 "polarity
specification of adaxial/abaxial axis" evidence=RCA] [GO:0009965
"leaf morphogenesis" evidence=RCA] [GO:0010014 "meristem
initiation" evidence=RCA] [GO:0010073 "meristem maintenance"
evidence=RCA] [GO:0010089 "xylem development" evidence=RCA]
[GO:0043481 "anthocyanin accumulation in tissues in response to UV
light" evidence=RCA] [GO:0044036 "cell wall macromolecule metabolic
process" evidence=RCA] [GO:0048364 "root development"
evidence=IMP;RCA] [GO:0048439 "flower morphogenesis" evidence=RCA]
[GO:0048443 "stamen development" evidence=RCA] [GO:0048519
"negative regulation of biological process" evidence=RCA]
InterPro:IPR004776 Pfam:PF03547 UniProt:Q9C6B8 GO:GO:0016021
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009506 GO:GO:0005737
GO:GO:0009734 GO:GO:0009926 GO:GO:0045177 GO:GO:0055085
GO:GO:0005215 GO:GO:0009640 GO:GO:0048364 GO:GO:0009630
GO:GO:0009505 GO:GO:0010051 GO:GO:0009908 GO:GO:0048830
GO:GO:0009925 GO:GO:0010338 GO:GO:0048826 GO:GO:0010229
GO:GO:0010358 EMBL:AC079676 eggNOG:NOG330901 HOGENOM:HOG000238224
KO:K13947 ProtClustDB:CLSN2679873 GO:GO:0009921 InterPro:IPR014024
TIGRFAMs:TIGR00946 EMBL:AF089084 EMBL:AF089085 EMBL:AF372950
EMBL:AY093960 IPI:IPI00533478 PIR:G96762 RefSeq:NP_177500.1
UniGene:At.10969 ProteinModelPortal:Q9C6B8 DIP:DIP-40041N
IntAct:Q9C6B8 STRING:Q9C6B8 TCDB:2.A.69.1.1 PaxDb:Q9C6B8
PRIDE:Q9C6B8 EnsemblPlants:AT1G73590.1 GeneID:843693
KEGG:ath:AT1G73590 GeneFarm:3019 TAIR:At1g73590 InParanoid:Q9C6B8
OMA:AHYPAPN PhylomeDB:Q9C6B8 Genevestigator:Q9C6B8
GermOnline:AT1G73590
Length = 622
Score = 1191 (424.3 bits), Expect = 1.1e-183, Sum P(2) = 1.1e-183
Identities = 256/454 (56%), Positives = 312/454 (68%)
Query: 1 MITWKDLYLVLTAVVPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS 60
MIT D Y V+TA+VPLYVAMILAYGSV+WWKIF+PDQCSGINRFVA+FAVPLLSFHFI+
Sbjct: 1 MITAADFYHVMTAMVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIA 60
Query: 61 TNDPYAMNFRFIAADTLQKIIMLFVLGIWTNFTKNGSLEWMITIFSLSTLPNTLVMGIPL 120
N+PYAMN RF+AAD+LQK+I+L +L +W ++NGSL+W IT+FSLSTLPNTLVMGIPL
Sbjct: 61 ANNPYAMNLRFLAADSLQKVIVLSLLFLWCKLSRNGSLDWTITLFSLSTLPNTLVMGIPL 120
Query: 121 LIAMYGEYSGSLMVQVVVLQCIIWYTLLLFLFEYRGAKMLIMEQFPETAASIVSFKVDSD 180
L MYG +SG LMVQ+VVLQCIIWYTL+LFLFEYRGAK+LI EQFP+TA SIVS VDSD
Sbjct: 121 LKGMYGNFSGDLMVQIVVLQCIIWYTLMLFLFEYRGAKLLISEQFPDTAGSIVSIHVDSD 180
Query: 181 VVSLDGRDFLETDAEIGDDGKLHVTVRKSNASRRSLGPCSLPAL--TPRPSNLTGAEIYS 238
++SLDGR LET+AEI +DGKLHVTVR+SNASR + L TPRPSNLT AEIYS
Sbjct: 181 IMSLDGRQPLETEAEIKEDGKLHVTVRRSNASRSDIYSRRSQGLSATPRPSNLTNAEIYS 240
Query: 239 LSSSRNPTPRGSNFNHSDFYSMMGVQGFPGGRLSNFGPADMYSVQSSRGPTPRPSNFEEN 298
L SSRNPTPRGS+FNH+DFYSMM G GGR SNFGP + +V S+GPTPRPSN+EE+
Sbjct: 241 LQSSRNPTPRGSSFNHTDFYSMMA-SG--GGRNSNFGPGE--AVFGSKGPTPRPSNYEED 295
Query: 299 --------SGQALSSPRFGFYPAQTVP---TSYPAPNPEFSSTLTKNTSKTXXXXXXXXX 347
+G A + RF + + YPAPNP S T T
Sbjct: 296 GGPAKPTAAGTAAGAGRFHYQSGGSGGGGGAHYPAPNPGMFSPNTGGGGGTAAKGNAPVV 355
Query: 348 XXXXXXXXXXXXXXSKANHDAKELHMFVWSSSTSPVSE--GGGLHVFGGTDFGASEHSGR 405
+ + + ++LHMFVWSSS SPVS+ GGG GG +++S
Sbjct: 356 GG------------KRQDGNGRDLHMFVWSSSASPVSDVFGGG----GGNHH--ADYSTA 397
Query: 406 SDQGAKEIRMLVADHPENGENKALPQNGDFGRED 439
++ K++++ V N + FG +D
Sbjct: 398 TNDHQKDVKISVPQGNSNDNQYVEREEFSFGNKD 431
Score = 613 (220.8 bits), Expect = 1.1e-183, Sum P(2) = 1.1e-183
Identities = 119/149 (79%), Positives = 131/149 (87%)
Query: 488 KHMPPASVMTRLILIMVWRKLIRNPNTYSSLIGLVWSLIAFRWHVSMPKIIEKSISILSD 547
K MPP SVMTRLILIMVWRKLIRNPN+YSSL G+ WSLI+F+W++ MP +I KSISILSD
Sbjct: 453 KVMPPTSVMTRLILIMVWRKLIRNPNSYSSLFGITWSLISFKWNIEMPALIAKSISILSD 512
Query: 548 AGLGMAMFSLGLFMALQPKIIACGNSVATFSMAVRFLTGPAVMAAASIAVGLRGTLLHVA 607
AGLGMAMFSLGLFMAL P+IIACGN A F+ A+RF+ GPAVM AS AVGLRG LLHVA
Sbjct: 513 AGLGMAMFSLGLFMALNPRIIACGNRRAAFAAAMRFVVGPAVMLVASYAVGLRGVLLHVA 572
Query: 608 IVQAALPQGIVPFVFAKEYNVHPAILSTA 636
I+QAALPQGIVPFVFAKEYNVHP ILSTA
Sbjct: 573 IIQAALPQGIVPFVFAKEYNVHPDILSTA 601
Score = 64 (27.6 bits), Expect = 1.1e-64, Sum P(2) = 1.1e-64
Identities = 16/61 (26%), Positives = 27/61 (44%)
Query: 431 QNGDFGREDFRFAGRGEGEDDQMDHKEGGPAELNKLGSNSTAELHPKATGAADAGMGKHM 490
+N +FG + F +G ++GGPA+ G+ + A +G + G G H
Sbjct: 269 RNSNFGPGEAVFGSKGPTPRPSNYEEDGGPAKPTAAGTAAGAGRFHYQSGGSGGGGGAHY 328
Query: 491 P 491
P
Sbjct: 329 P 329
>UNIPROTKB|Q5SMQ9 [details] [associations]
symbol:PIN1 "Auxin efflux carrier component 1"
species:39947 "Oryza sativa Japonica Group" [GO:0005215
"transporter activity" evidence=IMP] [GO:0006810 "transport"
evidence=IMP] [GO:0009734 "auxin mediated signaling pathway"
evidence=IMP] [GO:0009921 "auxin efflux carrier complex"
evidence=IMP] [GO:0016020 "membrane" evidence=ISS] [GO:0016021
"integral to membrane" evidence=ISS] [GO:0048830 "adventitious root
development" evidence=IMP] InterPro:IPR004776 Pfam:PF03547
GO:GO:0016021 GO:GO:0009723 GO:GO:0010329 GO:GO:0005215
GO:GO:0009958 GO:GO:0010315 GO:GO:0048830 GO:GO:0009925
EMBL:AP005297 EMBL:AF056027 EMBL:AP004800 PIR:T02876
RefSeq:NP_001048095.1 UniGene:Os.2230
EnsemblPlants:LOC_Os02g50960.1 GeneID:4330700
KEGG:dosa:Os02t0743400-01 KEGG:osa:4330700 Gramene:Q5SMQ9
eggNOG:NOG330901 HOGENOM:HOG000238224 KO:K13947
ProtClustDB:CLSN2679873 GO:GO:0009921 GO:GO:0000323
InterPro:IPR014024 TIGRFAMs:TIGR00946 Uniprot:Q5SMQ9
Length = 595
Score = 1121 (399.7 bits), Expect = 6.1e-183, Sum P(2) = 6.1e-183
Identities = 224/338 (66%), Positives = 270/338 (79%)
Query: 1 MITWKDLYLVLTAVVPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS 60
MIT D Y V+TA+VPLYVAMILAYGSV+WW+IF+PDQCSGINRFVA+FAVPLLSFHFIS
Sbjct: 1 MITAADFYHVMTAMVPLYVAMILAYGSVKWWRIFTPDQCSGINRFVALFAVPLLSFHFIS 60
Query: 61 TNDPYAMNFRFIAADTLQKIIMLFVLGIWTNFTKNGSLEWMITIFSLSTLPNTLVMGIPL 120
TN+PY MN RFIAADTLQK+++L +L W++ ++ GSLEW IT+FSLSTLPNTLVMGIPL
Sbjct: 61 TNNPYTMNLRFIAADTLQKLMVLAMLTAWSHLSRRGSLEWTITLFSLSTLPNTLVMGIPL 120
Query: 121 LIAMYGEYSGSLMVQVVVLQCIIWYTLLLFLFEYRGAKMLIMEQFPETAASIVSFKVDSD 180
L MYGE+SGSLMVQ+VVLQCIIWYTL+LF+FEYRGA+MLI EQFP+TAA+I S VD D
Sbjct: 121 LKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEYRGARMLITEQFPDTAANIASIVVDPD 180
Query: 181 VVSLDGR-DFLETDAEIGDDGKLHVTVRKSNASR------RSLGPCSLPALTPRPSNLTG 233
VVSLDGR D +ET+ E+ +DG++HVTVR+SNASR RS+G + TPRPSNLT
Sbjct: 181 VVSLDGRRDAIETETEVKEDGRIHVTVRRSNASRSDIYSRRSMG---FSSTTPRPSNLTN 237
Query: 234 AEIYSLSSSRNPTPRGSNFNHSDFYSMMGVQGFPGGRLSNFGPADMYSVQSSRGPTPRPS 293
AEIYSL SSRNPTPRGS+FNH+DFYSM+G R SNFG AD + V++ G TPRPS
Sbjct: 238 AEIYSLQSSRNPTPRGSSFNHTDFYSMVG-------RSSNFGAADAFGVRT--GATPRPS 288
Query: 294 NFEENSGQALSSPRFGFYPAQTVPTS--YPAPNPEFSS 329
N+E+++ S P++ + P + YPAPNP SS
Sbjct: 289 NYEDDA----SKPKYPLPASNAAPMAGHYPAPNPAVSS 322
Score = 676 (243.0 bits), Expect = 6.1e-183, Sum P(2) = 6.1e-183
Identities = 156/259 (60%), Positives = 179/259 (69%)
Query: 378 SSTSPVSEGGGLHVFGGTDFGASEHSGRSDQGAKEIRMLVADHPENGENKALPQNGDFGR 437
++T+ ++G LH+F + AS S GA + A + A + R
Sbjct: 330 AATNGQAKGEDLHMFVWSS-SASPVSDVFGGGAPDYNDAAAVKSPRKMDGAKDREDYVER 388
Query: 438 EDFRFAGRGEGEDDQMDHKEGGPAELNKLGSNSTAELHPKATGAADAGMGKHMPPASVMT 497
+DF F RG + D E G K + + A+ KA A A MPP SVMT
Sbjct: 389 DDFSFGNRGVMDRDA----EAGD---EKAAAAAGAD-PSKAMAAPTA-----MPPTSVMT 435
Query: 498 RLILIMVWRKLIRNPNTYSSLIGLVWSLIAFRWHVSMPKIIEKSISILSDAGLGMAMFSL 557
RLILIMVWRKLIRNPNTYSSLIGL+WSL+ FRW+ MP I+ KSISILSDAGLGMAMFSL
Sbjct: 436 RLILIMVWRKLIRNPNTYSSLIGLIWSLVCFRWNFEMPAIVLKSISILSDAGLGMAMFSL 495
Query: 558 GLFMALQPKIIACGNSVATFSMAVRFLTGPAVMAAASIAVGLRGTLLHVAIVQAALPQGI 617
GLFMALQP IIACGN VAT++MAVRFL GPAVMAAAS AVGLRGTLLHVAIVQAALPQGI
Sbjct: 496 GLFMALQPHIIACGNKVATYAMAVRFLAGPAVMAAASFAVGLRGTLLHVAIVQAALPQGI 555
Query: 618 VPFVFAKEYNVHPAILSTA 636
VPFVFAKEY+VHP+ILSTA
Sbjct: 556 VPFVFAKEYSVHPSILSTA 574
Score = 167 (63.8 bits), Expect = 6.3e-09, P = 6.3e-09
Identities = 70/209 (33%), Positives = 91/209 (43%)
Query: 246 TPRGSNFNHSDFYSMMGVQGFPGG--RLSNFGPADMYSVQSSRGPTPRPSNFEENSGQAL 303
T R SN + SD YS + GF R SN A++YS+QSSR PTPR S+F ++
Sbjct: 206 TVRRSNASRSDIYSRRSM-GFSSTTPRPSNLTNAEIYSLQSSRNPTPRGSSFNHTDFYSM 264
Query: 304 --SSPRFGFYPAQTVPT-SYPAP-NPEFSSTLTKN---TSKTXXXXXXXXXXXXXXXXXX 356
S FG A V T + P P N E ++ K S
Sbjct: 265 VGRSSNFGAADAFGVRTGATPRPSNYEDDASKPKYPLPASNAAPMAGHYPAPNPAVSSAP 324
Query: 357 XXXXXSKANHDAK--ELHMFVWSSSTSPVSEGGGLHVFGG--TDFG--ASEHSGRSDQGA 410
+ N AK +LHMFVWSSS SPVS+ VFGG D+ A+ S R GA
Sbjct: 325 KGAKKAATNGQAKGEDLHMFVWSSSASPVSD-----VFGGGAPDYNDAAAVKSPRKMDGA 379
Query: 411 KEIRMLVA-DHPENGENKALPQNGDFGRE 438
K+ V D G + ++ + G E
Sbjct: 380 KDREDYVERDDFSFGNRGVMDRDAEAGDE 408
>TAIR|locus:2175559 [details] [associations]
symbol:EIR1 "AT5G57090" species:3702 "Arabidopsis
thaliana" [GO:0005215 "transporter activity" evidence=ISS]
[GO:0009672 "auxin:hydrogen symporter activity" evidence=ISS]
[GO:0009926 "auxin polar transport" evidence=ISS;RCA;IMP]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0055085
"transmembrane transport" evidence=IEA] [GO:0000323 "lytic vacuole"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0009749 "response to glucose stimulus" evidence=IEP]
[GO:0008361 "regulation of cell size" evidence=RCA] [GO:0009637
"response to blue light" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009733 "response to auxin
stimulus" evidence=IMP;RCA] [GO:0043481 "anthocyanin accumulation
in tissues in response to UV light" evidence=RCA] [GO:0046685
"response to arsenic-containing substance" evidence=RCA]
[GO:0048364 "root development" evidence=RCA] [GO:0048443 "stamen
development" evidence=RCA] [GO:0009723 "response to ethylene
stimulus" evidence=IMP] [GO:0009925 "basal plasma membrane"
evidence=IDA] [GO:0009958 "positive gravitropism" evidence=IMP]
[GO:0010329 "auxin efflux transmembrane transporter activity"
evidence=IDA] InterPro:IPR004776 Pfam:PF03547 GO:GO:0016021
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009926 GO:GO:0009723
GO:GO:0009749 GO:GO:0010329 GO:GO:0009958 EMBL:AB023042
GO:GO:0009925 HOGENOM:HOG000238224 KO:K13947 GO:GO:0000323
InterPro:IPR014024 TIGRFAMs:TIGR00946 EMBL:AF056026 EMBL:AF087459
EMBL:AF093241 EMBL:AF086906 EMBL:AF086907 EMBL:AY078965
EMBL:BT001152 IPI:IPI00524610 PIR:T51808 RefSeq:NP_568848.1
UniGene:At.9674 ProteinModelPortal:Q9LU77 IntAct:Q9LU77
STRING:Q9LU77 TCDB:2.A.69.1.2 PaxDb:Q9LU77 PRIDE:Q9LU77
EnsemblPlants:AT5G57090.1 GeneID:835813 KEGG:ath:AT5G57090
GeneFarm:3020 TAIR:At5g57090 eggNOG:NOG264531 InParanoid:Q9LU77
OMA:AMYGDFS PhylomeDB:Q9LU77 ProtClustDB:CLSN2690032
Genevestigator:Q9LU77 GermOnline:AT5G57090 Uniprot:Q9LU77
Length = 647
Score = 1653 (586.9 bits), Expect = 5.0e-170, P = 5.0e-170
Identities = 367/658 (55%), Positives = 441/658 (67%)
Query: 1 MITWKDLYLVLTAVVPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS 60
MIT KD+Y VL A+VPLYVAMILAYGSVRWW IF+PDQCSGINRFVA+FAVPLLSFHFIS
Sbjct: 1 MITGKDMYDVLAAMVPLYVAMILAYGSVRWWGIFTPDQCSGINRFVAVFAVPLLSFHFIS 60
Query: 61 TNDPYAMNFRFIAADTLQKIIMLFVLGIWTNFTKNGSLEWMITIFSLSTLPNTLVMGIPL 120
+NDPYAMN+ F+AAD+LQK+++L L +W F++ GSLEWMIT+FSLSTLPNTLVMGIPL
Sbjct: 61 SNDPYAMNYHFLAADSLQKVVILAALFLWQAFSRRGSLEWMITLFSLSTLPNTLVMGIPL 120
Query: 121 LIAMYGEYSGSLMVQVVVLQCIIWYTLLLFLFEYRGAKMLIMEQFPETAASIVSFKVDSD 180
L AMYG++SG+LMVQ+VVLQ IIWYTL+LFLFE+RGAK+LI EQFPETA SI SF+VDSD
Sbjct: 121 LRAMYGDFSGNLMVQIVVLQSIIWYTLMLFLFEFRGAKLLISEQFPETAGSITSFRVDSD 180
Query: 181 VVSLDGRDFLETDAEIGDDGKLHVTVRKSNASRRSL--------GPCSLPALTPRPSNLT 232
V+SL+GR+ L+TDAEIGDDGKLHV VR+S+A+ + G + +TPR SNLT
Sbjct: 181 VISLNGREPLQTDAEIGDDGKLHVVVRRSSAASSMISSFNKSHGGGLNSSMITPRASNLT 240
Query: 233 GAEIYSLSSSRNPTPRGSNFNHSDFYSMMGVQGFPGGRLSNFGPADMYSVQSSRGPTPRP 292
G EIYS+ SSR PTPR S+FN +DFY+M P R G + Y + GP
Sbjct: 241 GVEIYSVQSSREPTPRASSFNQTDFYAMFNASKAPSPR---HGYTNSYG-GAGAGPGGDV 296
Query: 293 SNFEENSGQALSSPRFGFYPAQTVPTSYPAPNP--EFSSTLTKNTSKTXXXXXXXXXXXX 350
+ + + G +PR + + + T+ A S L N S
Sbjct: 297 YSLQSSKGV---TPRTSNFDEEVMKTAKKAGRGGRSMSGELYNNNSVPSYPPPNPMFTGS 353
Query: 351 XXXXXXXXXXXSKANHDA---------KELHMFVWSSSTSPVSEGGGLHVFGGTDFGASE 401
S KE++MFVWSSS SPVSE +
Sbjct: 354 TSGASGVKKKESGGGGSGGGVGVGGQNKEMNMFVWSSSASPVSEANAKNAMT-------- 405
Query: 402 HSGRSDQGAKEIRMLVADHPENGENKALPQNGDFGREDFRFAGRGEGEDDQMDHKEGGPA 461
G S + + ++ + H +N KA+ QN E+ +G E DQ D GG +
Sbjct: 406 -RGSSTDVSTDPKVSIPPH-DNLATKAM-QNLI---ENMSPGRKGHVEMDQ-DGNNGGKS 458
Query: 462 ELNKLGSNSTAELHPKATGAADAGMG---KHMPPASVMTRLILIMVWRKLIRNPNTYSSL 518
+G K + D G G + MPPASVMTRLILIMVWRKLIRNPNTYSSL
Sbjct: 459 PY--MGK--------KGSDVEDGGPGPRKQQMPPASVMTRLILIMVWRKLIRNPNTYSSL 508
Query: 519 IGLVWSLIAFRWHVSMPKIIEKSISILSDAGLGMAMFSLGLFMALQPKIIACGNSVATFS 578
GL WSL++F+W++ MP I+ SISILSDAGLGMAMFSLGLFMALQPKIIACG SVA F+
Sbjct: 509 FGLAWSLVSFKWNIKMPTIMSGSISILSDAGLGMAMFSLGLFMALQPKIIACGKSVAGFA 568
Query: 579 MAVRFLTGPAVMAAASIAVGLRGTLLHVAIVQAALPQGIVPFVFAKEYNVHPAILSTA 636
MAVRFLTGPAV+AA SIA+G+RG LLH+AIVQAALPQGIVPFVFAKEYNVHP ILSTA
Sbjct: 569 MAVRFLTGPAVIAATSIAIGIRGDLLHIAIVQAALPQGIVPFVFAKEYNVHPDILSTA 626
>TAIR|locus:2013975 [details] [associations]
symbol:PIN3 "AT1G70940" species:3702 "Arabidopsis
thaliana" [GO:0005215 "transporter activity" evidence=ISS]
[GO:0009672 "auxin:hydrogen symporter activity" evidence=ISS]
[GO:0009926 "auxin polar transport" evidence=ISS;RCA;IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0009606 "tropism"
evidence=IMP] [GO:0012506 "vesicle membrane" evidence=IDA]
[GO:0016328 "lateral plasma membrane" evidence=IDA] [GO:0007389
"pattern specification process" evidence=IGI;RCA] [GO:0010082
"regulation of root meristem growth" evidence=IGI] [GO:0048364
"root development" evidence=IGI;IMP] [GO:0009630 "gravitropism"
evidence=TAS] [GO:0009986 "cell surface" evidence=IDA] [GO:0048766
"root hair initiation" evidence=IMP] [GO:0048767 "root hair
elongation" evidence=RCA;IMP] [GO:0009416 "response to light
stimulus" evidence=IDA] [GO:0009958 "positive gravitropism"
evidence=IMP] [GO:0010315 "auxin efflux" evidence=IMP] [GO:0000271
"polysaccharide biosynthetic process" evidence=RCA] [GO:0008356
"asymmetric cell division" evidence=RCA] [GO:0008361 "regulation of
cell size" evidence=RCA] [GO:0009825 "multidimensional cell growth"
evidence=RCA] [GO:0009932 "cell tip growth" evidence=RCA]
[GO:0010015 "root morphogenesis" evidence=RCA] [GO:0010218
"response to far red light" evidence=RCA] [GO:0010817 "regulation
of hormone levels" evidence=RCA] [GO:0040007 "growth" evidence=RCA]
[GO:0043481 "anthocyanin accumulation in tissues in response to UV
light" evidence=RCA] [GO:0048765 "root hair cell differentiation"
evidence=RCA] [GO:0071555 "cell wall organization" evidence=RCA]
InterPro:IPR004776 Pfam:PF03547 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009986 GO:GO:0009926 GO:GO:0055085
GO:GO:0009958 GO:GO:0010315 GO:GO:0048767 GO:GO:0009416
GO:GO:0012506 GO:GO:0016328 GO:GO:0007389 EMBL:AC008148
GO:GO:0048766 GO:GO:0010082 eggNOG:NOG330901 HOGENOM:HOG000238224
KO:K13947 InterPro:IPR014024 TIGRFAMs:TIGR00946 EMBL:AF087818
EMBL:AY136327 EMBL:BT002085 IPI:IPI00534879 PIR:G96733
RefSeq:NP_177250.1 UniGene:At.11573 ProteinModelPortal:Q9S7Z8
STRING:Q9S7Z8 TCDB:2.A.69.1.4 PaxDb:Q9S7Z8 PRIDE:Q9S7Z8
EnsemblPlants:AT1G70940.1 GeneID:843432 KEGG:ath:AT1G70940
GeneFarm:3021 TAIR:At1g70940 InParanoid:Q9S7Z8 OMA:VAFRWHV
PhylomeDB:Q9S7Z8 ProtClustDB:CLSN2682831 Genevestigator:Q9S7Z8
GermOnline:AT1G70940 Uniprot:Q9S7Z8
Length = 640
Score = 1581 (561.6 bits), Expect = 2.2e-162, P = 2.2e-162
Identities = 329/462 (71%), Positives = 356/462 (77%)
Query: 1 MITWKDLYLVLTAVVPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS 60
MI+W DLY VLTAV+PLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS
Sbjct: 1 MISWHDLYTVLTAVIPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS 60
Query: 61 TNDPYAMNFRFIAADTLQKIIMLFVLGIWTNFTKNGSLEWMITIFSLSTLPNTLVMGIPL 120
TN+PYAMN RFIAADTLQKIIML +L +W NFT++GSLEW ITIFSLSTLPNTLVMGIPL
Sbjct: 61 TNNPYAMNLRFIAADTLQKIIMLSLLVLWANFTRSGSLEWSITIFSLSTLPNTLVMGIPL 120
Query: 121 LIAMYGEYSGSLMVQVVVLQCIIWYTLLLFLFEYRGAKMLIMEQFPETAASIVSFKVDSD 180
LIAMYGEYSGSLMVQ+VVLQCIIWYTLLLFLFE+RGAKMLIMEQFPETAASIVSFKV+SD
Sbjct: 121 LIAMYGEYSGSLMVQIVVLQCIIWYTLLLFLFEFRGAKMLIMEQFPETAASIVSFKVESD 180
Query: 181 VVSLDGRDFLETDAEIGDDGKLHVTVRKSNASRRSLGPCSLPALTPRPSNLTGAEIYSLS 240
VVSLDG DFLETDAEIGDDGKLHVTVRKSNASRRS C P +TPRPSNLTGAEIYSLS
Sbjct: 181 VVSLDGHDFLETDAEIGDDGKLHVTVRKSNASRRSF--CG-PNMTPRPSNLTGAEIYSLS 237
Query: 241 SSRNPTPRGSNFNHSDFYSMMGVQGFPGGRLSNFGPADMYSVQSSRGPTPRPSNFEENSG 300
+ TPRGSNFNHSDFY+MMG FPGGRLSNFGPADMYSVQSSRGPTPRPSNFEEN
Sbjct: 238 T----TPRGSNFNHSDFYNMMG---FPGGRLSNFGPADMYSVQSSRGPTPRPSNFEENCA 290
Query: 301 QALSSPRFGFYPAQTVPTSYPAPNPEFSSTLTKNTSKTXXXXXXXXXXXXXXXXXXXXXX 360
A SSPRFG+YP SYPAPNPEFSST T +K+
Sbjct: 291 MA-SSPRFGYYPGGGAG-SYPAPNPEFSSTTTSTANKSVNKNPKDVNTNQQTTLPTGGKS 348
Query: 361 XSKANHDAKELHMFVWSSSTSPVSEGGGLHVFGGT---DFGASEHSGRSDQGAKEIRMLV 417
S HDAKELHMFVWSS+ SPVS+ GL+VFGG D G G + + +
Sbjct: 349 NS---HDAKELHMFVWSSNGSPVSDRAGLNVFGGAPDNDQGGRSDQGAKEI---RMLVPD 402
Query: 418 ADHPENGENKALPQNGDFGRED-FRFAGRGEGEDDQMDHKEG 458
H + A P +GDFG E F FAG+ E + D + G
Sbjct: 403 QSHNGETKAVAHPASGDFGGEQQFSFAGKEEEAERPKDAENG 444
Score = 1394 (495.8 bits), Expect = 1.4e-142, P = 1.4e-142
Identities = 293/418 (70%), Positives = 321/418 (76%)
Query: 222 PALTPRPSNLTGAEIYSLSSSRNPTPRGSNFNHSDFYSMMGVQGFPGGRLSNFGPADMYS 281
P +TPRPSNLTGAEIYSLS+ TPRGSNFNHSDFY+MMG FPGGRLSNFGPADMYS
Sbjct: 219 PNMTPRPSNLTGAEIYSLST----TPRGSNFNHSDFYNMMG---FPGGRLSNFGPADMYS 271
Query: 282 VQSSRGPTPRPSNFEENSGQALSSPRFGFYPAQTVPTSYPAPNPEFSSTLTKNTSKTXXX 341
VQSSRGPTPRPSNFEEN A SSPRFG+YP SYPAPNPEFSST T +K+
Sbjct: 272 VQSSRGPTPRPSNFEENCAMA-SSPRFGYYPGGGAG-SYPAPNPEFSSTTTSTANKSVNK 329
Query: 342 XXXXXXXXXXXXXXXXXXXXSKANHDAKELHMFVWSSSTSPVSEGGGLHVFGGTDFGASE 401
S HDAKELHMFVWSS+ SPVS+ GL+VFGG ++
Sbjct: 330 NPKDVNTNQQTTLPTGGKSNS---HDAKELHMFVWSSNGSPVSDRAGLNVFGGAP--DND 384
Query: 402 HSGRSDQGAKEIRMLVADHPENGENKAL--PQNGDFGRED-FRFAGRGEGEDDQMDHKEG 458
GRSDQGAKEIRMLV D NGE KA+ P +GDFG E F FAG+ E + D + G
Sbjct: 385 QGGRSDQGAKEIRMLVPDQSHNGETKAVAHPASGDFGGEQQFSFAGKEEEAERPKDAENG 444
Query: 459 GPAELNKLGSNSTAELHPKA-TGAADAGMGKHMPPASVMTRLILIMVWRKLIRNPNTYSS 517
LNKL NSTA L K G A+A K+MPPASVMTRLILIMVWRKLIRNPNTYSS
Sbjct: 445 ----LNKLAPNSTAALQSKTGLGGAEASQRKNMPPASVMTRLILIMVWRKLIRNPNTYSS 500
Query: 518 LIGLVWSLIAFRWHVSMPKIIEKSISILSDAGLGMAMFSLGLFMALQPKIIACGNSVATF 577
LIGL+W+L+AFRWHV+MPKII++SISILSDAGLGMAMFSLGLFMALQPK+IACGNSVATF
Sbjct: 501 LIGLIWALVAFRWHVAMPKIIQQSISILSDAGLGMAMFSLGLFMALQPKLIACGNSVATF 560
Query: 578 SMAVRFLTGPAVMAAASIAVGLRGTLLHVAIVQAALPQGIVPFVFAKEYNVHPAILST 635
+MAVRFLTGPAVMA A+IA+GLRG LL VAIVQAALPQGIVPFVFAKEYNVHPAILST
Sbjct: 561 AMAVRFLTGPAVMAVAAIAIGLRGDLLRVAIVQAALPQGIVPFVFAKEYNVHPAILST 618
>TAIR|locus:2201225 [details] [associations]
symbol:PIN7 "AT1G23080" species:3702 "Arabidopsis
thaliana" [GO:0005215 "transporter activity" evidence=ISS]
[GO:0009672 "auxin:hydrogen symporter activity" evidence=ISS]
[GO:0009926 "auxin polar transport" evidence=ISS;RCA;IMP]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0055085
"transmembrane transport" evidence=IEA] [GO:0009942 "longitudinal
axis specification" evidence=IMP] [GO:0007389 "pattern
specification process" evidence=IGI;RCA] [GO:0048364 "root
development" evidence=IGI] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0010329 "auxin efflux transmembrane transporter
activity" evidence=IDA] [GO:0016020 "membrane" evidence=IDA]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0000271 "polysaccharide
biosynthetic process" evidence=RCA] [GO:0008361 "regulation of cell
size" evidence=RCA] [GO:0009825 "multidimensional cell growth"
evidence=RCA] [GO:0009932 "cell tip growth" evidence=RCA]
[GO:0010015 "root morphogenesis" evidence=RCA] [GO:0010817
"regulation of hormone levels" evidence=RCA] [GO:0040007 "growth"
evidence=RCA] [GO:0043481 "anthocyanin accumulation in tissues in
response to UV light" evidence=RCA] [GO:0048767 "root hair
elongation" evidence=RCA] [GO:0071555 "cell wall organization"
evidence=RCA] InterPro:IPR004776 Pfam:PF03547 GO:GO:0016021
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0009506
GO:GO:0009926 GO:GO:0010329 GO:GO:0048364 GO:GO:0009942
EMBL:AC002311 HOGENOM:HOG000238224 KO:K13947 InterPro:IPR014024
TIGRFAMs:TIGR00946 ProtClustDB:CLSN2682831 EMBL:AF087820
EMBL:AY052356 IPI:IPI00535539 IPI:IPI00548100 PIR:A86365
RefSeq:NP_564189.1 RefSeq:NP_849700.1 UniGene:At.10543
ProteinModelPortal:Q940Y5 IntAct:Q940Y5 STRING:Q940Y5
TCDB:2.A.69.1.3 PaxDb:Q940Y5 PRIDE:Q940Y5 EnsemblPlants:AT1G23080.1
GeneID:838916 KEGG:ath:AT1G23080 GeneFarm:3028 TAIR:At1g23080
eggNOG:NOG317016 InParanoid:Q940Y5 OMA:EESCAMA PhylomeDB:Q940Y5
Genevestigator:Q940Y5 GermOnline:AT1G23080 Uniprot:Q940Y5
Length = 619
Score = 1424 (506.3 bits), Expect = 9.3e-146, P = 9.3e-146
Identities = 284/337 (84%), Positives = 298/337 (88%)
Query: 1 MITWKDLYLVLTAVVPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS 60
MITW DLY VLTAV+PLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS
Sbjct: 1 MITWHDLYTVLTAVIPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS 60
Query: 61 TNDPYAMNFRFIAADTLQKIIMLFVLGIWTNFTKNGSLEWMITIFSLSTLPNTLVMGIPL 120
+N+PYAMN RFIAADTLQK+IML +L IW NFT++GSLEW ITIFSLSTLPNTLVMGIPL
Sbjct: 61 SNNPYAMNLRFIAADTLQKLIMLTLLIIWANFTRSGSLEWSITIFSLSTLPNTLVMGIPL 120
Query: 121 LIAMYGEYSGSLMVQVVVLQCIIWYTLLLFLFEYRGAKMLIMEQFPETAASIVSFKVDSD 180
LIAMYGEYSGSLMVQ+VVLQCIIWYTLLLFLFEYRGAK+LIMEQFPET ASIVSFKV+SD
Sbjct: 121 LIAMYGEYSGSLMVQIVVLQCIIWYTLLLFLFEYRGAKILIMEQFPETGASIVSFKVESD 180
Query: 181 VVSLDGRDFLETDAEIGDDGKLHVTVRKSNASRRSLGPCSLPALTPRPSNLTGAEIYSLS 240
VVSLDG DFLETDA+IGDDGKLHVTVRKSNASRRS +TPRPSNLTGAEIYSL
Sbjct: 181 VVSLDGHDFLETDAQIGDDGKLHVTVRKSNASRRSFYGGGGTNMTPRPSNLTGAEIYSL- 239
Query: 241 SSRNPTPRGSNFNHSDFYSMMGVQGFPGGRLSNFGPADMYSVQSSRGPTPRPSNFEENSG 300
N TPRGSNFNHSDFYSMMG FPGGRLSNFGPADMYSVQSSRGPTPRPSNFEE+
Sbjct: 240 ---NTTPRGSNFNHSDFYSMMG---FPGGRLSNFGPADMYSVQSSRGPTPRPSNFEESCA 293
Query: 301 QALSSPRFGFYPAQTVPTSYPAPNPEFSSTLTKNTSK 337
A SSPRFG+YP P SYPAPNPEFS T K SK
Sbjct: 294 MA-SSPRFGYYPGGA-PGSYPAPNPEFS-TGNKTGSK 327
Score = 948 (338.8 bits), Expect = 2.6e-95, P = 2.6e-95
Identities = 233/415 (56%), Positives = 270/415 (65%)
Query: 246 TPRGSNFNHSDFYSMMGVQGFPGGRLSNFGPADMYSVQSSRGPTPRPSNFEENSGQALSS 305
T R SN + FY G P R SN A++YS+ + TPR SNF + ++
Sbjct: 205 TVRKSNASRRSFYGGGGTNMTP--RPSNLTGAEIYSLNT----TPRGSNFNHSDFYSMMG 258
Query: 306 -P--RFG-FYPAQ--TVPTSY-PAPNPE-FSSTLTKNTSKTXXXXXXXXXXXXXX---XX 354
P R F PA +V +S P P P F + +S
Sbjct: 259 FPGGRLSNFGPADMYSVQSSRGPTPRPSNFEESCAMASSPRFGYYPGGAPGSYPAPNPEF 318
Query: 355 XXXXXXXSKA---NH---------DAKELHMFVWSSSTSPVSEGGGLHVFGGTDFGASEH 402
SKA NH DAKELHMFVW S+ SPVS+ GL V D GA+E
Sbjct: 319 STGNKTGSKAPKENHHHVGKSNSNDAKELHMFVWGSNGSPVSDRAGLQV----DNGANEQ 374
Query: 403 SGRSDQG-AKEIRMLVADHPENGENKALPQNGDFGREDFRFAGRGEGEDDQMDHKEGGPA 461
G+SDQG AKEIRML++DH +NGENKA P NGD+G GE E +++ KE P
Sbjct: 375 VGKSDQGGAKEIRMLISDHTQNGENKAGPMNGDYG---------GEEESERV--KEV-PN 422
Query: 462 ELNKLGSNSTAELHPK-ATGAADAGMGKHMPPASVMTRLILIMVWRKLIRNPNTYSSLIG 520
L+KL NSTAEL+PK A + KHMPPASVMTRLILIMVWRKLIRNPNTYSSLIG
Sbjct: 423 GLHKLRCNSTAELNPKEAIETGETVPVKHMPPASVMTRLILIMVWRKLIRNPNTYSSLIG 482
Query: 521 LVWSLIAFRWHVSMPKIIEKSISILSDAGLGMAMFSLGLFMALQPKIIACGNSVATFSMA 580
L+W+L+AFRW V+MPKII++SISILSDAGLGMAMFSLGLFMALQPK+IACGNS ATF+MA
Sbjct: 483 LIWALVAFRWDVAMPKIIQQSISILSDAGLGMAMFSLGLFMALQPKLIACGNSTATFAMA 542
Query: 581 VRFLTGPAVMAAASIAVGLRGTLLHVAIVQAALPQGIVPFVFAKEYNVHPAILST 635
VRF TGPAVMA A++A+GLRG LL VAIVQAALPQGIVPFVFAKEYNVHPAILST
Sbjct: 543 VRFFTGPAVMAVAAMAIGLRGDLLRVAIVQAALPQGIVPFVFAKEYNVHPAILST 597
>TAIR|locus:2025312 [details] [associations]
symbol:PIN6 "AT1G77110" species:3702 "Arabidopsis
thaliana" [GO:0005215 "transporter activity" evidence=ISS]
[GO:0009672 "auxin:hydrogen symporter activity" evidence=ISS]
[GO:0009926 "auxin polar transport" evidence=ISS;IMP] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0055085 "transmembrane
transport" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0009855 "determination of bilateral symmetry"
evidence=RCA] [GO:0010014 "meristem initiation" evidence=RCA]
[GO:0010073 "meristem maintenance" evidence=RCA] [GO:0048451 "petal
formation" evidence=RCA] [GO:0048453 "sepal formation"
evidence=RCA] InterPro:IPR004776 Pfam:PF03547 GO:GO:0016021
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0009734
GO:GO:0009926 GO:GO:0055085 EMBL:AC002291 HOGENOM:HOG000238224
KO:K13947 InterPro:IPR014024 TIGRFAMs:TIGR00946 EMBL:AF087819
IPI:IPI00533868 PIR:A96800 RefSeq:NP_177836.1 UniGene:At.11574
ProteinModelPortal:Q9SQH6 STRING:Q9SQH6 PaxDb:Q9SQH6 PRIDE:Q9SQH6
EnsemblPlants:AT1G77110.1 GeneID:844046 KEGG:ath:AT1G77110
GeneFarm:3027 TAIR:At1g77110 eggNOG:NOG272808 InParanoid:Q9SQH6
OMA:LVVLQCI PhylomeDB:Q9SQH6 ProtClustDB:CLSN2682968
Genevestigator:Q9SQH6 GermOnline:AT1G77110 Uniprot:Q9SQH6
Length = 570
Score = 750 (269.1 bits), Expect = 5.4e-130, Sum P(2) = 5.4e-130
Identities = 160/312 (51%), Positives = 206/312 (66%)
Query: 1 MITWKDLYLVLTAVVPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS 60
MIT + Y V+ A+ PLY AM +AYGSV+W KIF+P QCSGINRFV++FAVP+LSFHFIS
Sbjct: 1 MITGNEFYTVMCAMAPLYFAMFVAYGSVKWCKIFTPAQCSGINRFVSVFAVPVLSFHFIS 60
Query: 61 TNDPYAMNFRFIAADTLQKIIMLFVLGIWTNFTKNGSLEWMITIFSLSTLPNTLVMGIPL 120
N+PY M+ FI ADTL KI + +L +W F K G L+W+IT+FS++TLPNTLVMGIPL
Sbjct: 61 QNNPYKMDTMFILADTLSKIFVFVLLSLWAVFFKAGGLDWLITLFSIATLPNTLVMGIPL 120
Query: 121 LIAMYGEYSGSLMVQVVVLQCIIWYTLLLFLFEYRGAKMLIMEQFP-ETAASIVSFKVDS 179
L AMYG+Y+ +LMVQ+VVLQCIIWYTLLLFLFE R A++LI +FP + A SI +VD
Sbjct: 121 LQAMYGDYTQTLMVQLVVLQCIIWYTLLLFLFELRAARLLIRAEFPGQAAGSIAKIQVDD 180
Query: 180 DVVSLDGRDFLETDAEIGDDGKLHVTVRKSNASRRSLGPCSLPALTPRPSNLTGAEIYSL 239
DV+SLDG D L T+ E +G++ + +R+S +S S LTPR SNL+ AEI+S+
Sbjct: 181 DVISLDGMDPLRTETETDVNGRIRLRIRRSVSSVPDSVMSSSLCLTPRASNLSNAEIFSV 240
Query: 240 SSSRNPTPRGSNFNHS-DFYSMMGVQGFPGGRLSNFG---------PADMYSVQSSRG-- 287
++ N G + + FY+ F G L FG P + SS
Sbjct: 241 NTPNNRFFHGGGGSGTLQFYNGSNEIMFCNGDLGGFGFTRPGLGASPRRLSGYASSDAYS 300
Query: 288 --PTPRPSNFEE 297
PTPR SNF E
Sbjct: 301 LQPTPRASNFNE 312
Score = 546 (197.3 bits), Expect = 5.4e-130, Sum P(2) = 5.4e-130
Identities = 107/153 (69%), Positives = 126/153 (82%)
Query: 484 AGMGKH-MPPASVMTRLILIMVWRKLIRNPNTYSSLIGLVWSLIAFRWHVSMPKIIEKSI 542
A +GK MP A VM RLIL +V RKL RNPNTYSSL+GLVWSLI+F+W++ MP I++ SI
Sbjct: 396 AAIGKQEMPSAIVMMRLILTVVGRKLSRNPNTYSSLLGLVWSLISFKWNIPMPNIVDFSI 455
Query: 543 SILSDAGLGMAMFSLGLFMALQPKIIACGNSVATFSMAVRFLTGPAVMAAASIAVGLRGT 602
I+SDAGLGMAMFSLGLFMALQPK+I CG AT M +RF++GP MA AS+ VGLRG+
Sbjct: 456 KIISDAGLGMAMFSLGLFMALQPKMIPCGAKKATMGMLIRFISGPLFMAGASLLVGLRGS 515
Query: 603 LLHVAIVQAALPQGIVPFVFAKEYNVHPAILST 635
LH AIVQAALPQGIVPFVFA+EYN+HP +LST
Sbjct: 516 RLHAAIVQAALPQGIVPFVFAREYNLHPDLLST 548
Score = 63 (27.2 bits), Expect = 1.6e-57, Sum P(2) = 1.6e-57
Identities = 17/38 (44%), Positives = 20/38 (52%)
Query: 222 PALTPRPSNLTG---AEIYSLSSSRNPTPRGSNFNHSD 256
P L P L+G ++ YSL PTPR SNFN D
Sbjct: 281 PGLGASPRRLSGYASSDAYSLQ----PTPRASNFNELD 314
Score = 42 (19.8 bits), Expect = 2.6e-55, Sum P(2) = 2.6e-55
Identities = 10/24 (41%), Positives = 12/24 (50%)
Query: 423 NGENKALPQNGDFGREDFRFAGRG 446
NG N+ + NGD G F G G
Sbjct: 261 NGSNEIMFCNGDLGGFGFTRPGLG 284
>TAIR|locus:2147835 [details] [associations]
symbol:PIN8 "AT5G15100" species:3702 "Arabidopsis
thaliana" [GO:0005215 "transporter activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM] [GO:0009672 "auxin:hydrogen
symporter activity" evidence=ISS] [GO:0009926 "auxin polar
transport" evidence=ISS] [GO:0005783 "endoplasmic reticulum"
evidence=IDA] [GO:0009555 "pollen development" evidence=IGI;IMP]
[GO:0010252 "auxin homeostasis" evidence=IMP] [GO:0010315 "auxin
efflux" evidence=IMP] InterPro:IPR004776 Pfam:PF03547 GO:GO:0005783
GO:GO:0016021 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009555
GO:GO:0055085 GO:GO:0010315 EMBL:AL391146 GO:GO:0010252
eggNOG:NOG85075 HOGENOM:HOG000238224 KO:K13947 InterPro:IPR014024
TIGRFAMs:TIGR00946 IPI:IPI00548971 PIR:T51455 RefSeq:NP_197014.1
UniGene:At.54852 ProteinModelPortal:Q9LFP6 PRIDE:Q9LFP6
EnsemblPlants:AT5G15100.1 GeneID:831362 KEGG:ath:AT5G15100
GeneFarm:3026 TAIR:At5g15100 InParanoid:Q9LFP6 OMA:QSLIWYT
PhylomeDB:Q9LFP6 ProtClustDB:CLSN2916838 Genevestigator:Q9LFP6
GermOnline:AT5G15100 Uniprot:Q9LFP6
Length = 367
Score = 448 (162.8 bits), Expect = 5.0e-87, Sum P(2) = 5.0e-87
Identities = 85/142 (59%), Positives = 112/142 (78%)
Query: 494 SVMTRLILIMVWRKLIRNPNTYSSLIGLVWSLIAFRWHVSMPKIIEKSISILSDAGLGMA 553
SV T IL+ WRKLI NPNTY++LIG++W+ + FR ++P++I+KSI +LSD GLGMA
Sbjct: 204 SVGTMKILLKAWRKLIINPNTYATLIGIIWATLHFRLGWNLPEMIDKSIHLLSDGGLGMA 263
Query: 554 MFSLGLFMALQPKIIACGNSVATFSMAVRFLTGPAVMAAASIAVGLRGTLLHVAIVQAAL 613
MFSLGLFMA Q IIACG +A +M ++F+ GPA+M A++ + L+ TL VAI+QAAL
Sbjct: 264 MFSLGLFMASQSSIIACGTKMAIITMLLKFVLGPALMIASAYCIRLKSTLFKVAILQAAL 323
Query: 614 PQGIVPFVFAKEYNVHPAILST 635
PQG+VPFVFAKEYN+HP I+ST
Sbjct: 324 PQGVVPFVFAKEYNLHPEIIST 345
Score = 441 (160.3 bits), Expect = 5.0e-87, Sum P(2) = 5.0e-87
Identities = 90/200 (45%), Positives = 133/200 (66%)
Query: 1 MITWKDLYLVLTAVVPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS 60
MI+W D+Y V++A VPLYV+M L + S R K+FSP+QC+GIN+FVA F++PLLSF IS
Sbjct: 1 MISWLDIYHVVSATVPLYVSMTLGFLSARHLKLFSPEQCAGINKFVAKFSIPLLSFQIIS 60
Query: 61 TNDPYAMNFRFIAADTLQKIIMLFVLGIWTNFT-----KNGSLEWMITIFSLSTLPNTLV 115
N+P+ M+ + I +D LQK +++ VL + F + G L W+IT S+S LPNTL+
Sbjct: 61 ENNPFKMSPKLILSDILQKFLVVVVLAMVLRFWHPTGGRGGKLGWVITGLSISVLPNTLI 120
Query: 116 MGIPLLIAMYGEYSGSLMVQVVVLQCIIWYTLLLFLFEYRGAKMLIMEQFPETAASIVSF 175
+G+P+L A+YG+ + S++ Q+VVLQ +IWYT+LLFLFE A+ L P + AS+
Sbjct: 121 LGMPILSAIYGDEAASILEQIVVLQSLIWYTILLFLFELNAARAL-----PSSGASLEHT 175
Query: 176 KVDSDVVSLDGRDFLETDAE 195
D + +++ E D E
Sbjct: 176 GNDQEEANIEDEPKEEEDEE 195
>TAIR|locus:2171392 [details] [associations]
symbol:PIN5 "AT5G16530" species:3702 "Arabidopsis
thaliana" [GO:0005215 "transporter activity" evidence=ISS]
[GO:0009672 "auxin:hydrogen symporter activity" evidence=ISS]
[GO:0009926 "auxin polar transport" evidence=ISS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0010252 "auxin
homeostasis" evidence=IMP] [GO:0080161 "auxin transmembrane
transporter activity" evidence=IDA] [GO:0080162 "intracellular
auxin transport" evidence=IDA] [GO:0009555 "pollen development"
evidence=IGI;IMP] InterPro:IPR004776 Pfam:PF03547 GO:GO:0005783
GO:GO:0016021 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009734
GO:GO:0009555 EMBL:AB005242 GO:GO:0010252 eggNOG:NOG85075
HOGENOM:HOG000238224 KO:K13947 InterPro:IPR014024
TIGRFAMs:TIGR00946 IPI:IPI00541520 RefSeq:NP_197157.4
UniGene:At.54868 ProteinModelPortal:Q9FFD0
EnsemblPlants:AT5G16530.1 GeneID:831515 KEGG:ath:AT5G16530
GeneFarm:3030 TAIR:At5g16530 InParanoid:Q9FFD0 OMA:ILIMSKA
PhylomeDB:Q9FFD0 ProtClustDB:CLSN2720146 Genevestigator:Q9FFD0
GermOnline:AT5G16530 GO:GO:0080161 GO:GO:0080162 Uniprot:Q9FFD0
Length = 351
Score = 447 (162.4 bits), Expect = 1.9e-83, Sum P(2) = 1.9e-83
Identities = 84/157 (53%), Positives = 110/157 (70%)
Query: 1 MITWKDLYLVLTAVVPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS 60
MI D+Y V+ A+VPLYVA+IL YGSV+WW IF+ DQC INR V F +PL + F +
Sbjct: 1 MINCGDVYKVIEAMVPLYVALILGYGSVKWWHIFTRDQCDAINRLVCYFTLPLFTIEFTA 60
Query: 61 TNDPYAMNFRFIAADTLQKIIMLFVLGIWTNFTKNGSLEWMITIFSLSTLPNTLVMGIPL 120
DP+ MN+RFIAAD L K+I++ VL +W ++ GS W IT FSL TL N+LV+G+PL
Sbjct: 61 HVDPFNMNYRFIAADVLSKVIIVTVLALWAKYSNKGSYCWSITSFSLCTLTNSLVVGVPL 120
Query: 121 LIAMYGEYSGSLMVQVVVLQCIIWYTLLLFLFEYRGA 157
AMYG+ + L+VQ V Q I+W TLLLF+ E+R A
Sbjct: 121 AKAMYGQQAVDLVVQSSVFQAIVWLTLLLFVLEFRKA 157
Score = 408 (148.7 bits), Expect = 1.9e-83, Sum P(2) = 1.9e-83
Identities = 73/137 (53%), Positives = 99/137 (72%)
Query: 500 ILIMVWRKLIRNPNTYSSLIGLVWSLIAFRWHVSMPKIIEKSISILSDAGLGMAMFSLGL 559
++ +VW KL NPN YS ++G+ W+ I+ RWH+ +P I+E SI I+S AG G AMF++G+
Sbjct: 192 VMSLVWLKLATNPNCYSCILGIAWAFISNRWHLELPGILEGSILIMSKAGTGTAMFNMGI 251
Query: 560 FMALQPKIIACGNSVATFSMAVRFLTGPAVMAAASIAVGLRGTLLHVAIVQAALPQGIVP 619
FMALQ K+I CG S+ M ++F+ GPA MA SI +GL G +L VAI+QAALPQ I
Sbjct: 252 FMALQEKLIVCGTSLTVMGMVLKFIAGPAAMAIGSIVLGLHGDVLRVAIIQAALPQSITS 311
Query: 620 FVFAKEYNVHPAILSTA 636
F+FAKEY +H +LSTA
Sbjct: 312 FIFAKEYGLHADVLSTA 328
>UNIPROTKB|Q721Y6 [details] [associations]
symbol:LMOf2365_0848 "Putative membrane protein"
species:265669 "Listeria monocytogenes serotype 4b str. F2365"
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR004776 Pfam:PF03547
GO:GO:0016021 GO:GO:0055085 EMBL:AE017262 GenomeReviews:AE017262_GR
eggNOG:COG0679 KO:K07088 RefSeq:YP_013451.1 STRING:Q721Y6
GeneID:2799455 KEGG:lmf:LMOf2365_0848 PATRIC:20322912
HOGENOM:HOG000266426 OMA:KIFPENT ProtClustDB:CLSK873389
Uniprot:Q721Y6
Length = 303
Score = 108 (43.1 bits), Expect = 6.9e-06, Sum P(2) = 6.9e-06
Identities = 28/133 (21%), Positives = 64/133 (48%)
Query: 504 VWRKLIRNPNTYSSLIGLVWSLIAFRWHVSMPKIIEKSISILSDAGLGMAMFSLGLFMAL 563
V ++++R P Y +L+GL L+ HVS+P + + ++ DA + M LG+ +A+
Sbjct: 153 VMKRVVRMPIAYGALLGLTLQLL----HVSLPSALMTCVKLVGDAAIPTIMIVLGMQLAV 208
Query: 564 QPKIIACGNSVATFSMAVRFLTGPAVMAAASIAVGLRGTLLHVAIVQAALPQGIVPFVFA 623
+ ++ ++ L P + ++ + + + I+ AA+P + A
Sbjct: 209 I-SFRRIELTKVGIALVLKLLIAPIIAFGLTLILPVDEMTKQIMILLAAMPTAANTTLMA 267
Query: 624 KEYNVHPAILSTA 636
+++ P ++S+A
Sbjct: 268 VQFDTKPDLVSSA 280
Score = 70 (29.7 bits), Expect = 6.9e-06, Sum P(2) = 6.9e-06
Identities = 23/107 (21%), Positives = 50/107 (46%)
Query: 52 PLLSFHFISTNDPYAMNFRFIAADTLQKIIMLFVLGIWTNFTKNGSLEWMITIFSLSTLP 111
P L+F+ TN +++ ++A + L +L +F +L+ + S
Sbjct: 41 PFLAFNTFYTN-ALTIDYAYLAIYIFALCLSLILLVSLISFLLGYNLQDRCALILASAFM 99
Query: 112 NTLVMGIPLLIAMYGEYSGSLMVQVVVLQCIIWYTLLLFLFEYRGAK 158
N G P+++ ++G + V ++VLQ + T+ ++ F +G+K
Sbjct: 100 NNGNYGTPVVLLVFGAVGLDIAVVLMVLQQLAMSTIGIY-FAAKGSK 145
>UNIPROTKB|Q5LLS8 [details] [associations]
symbol:SPO3843 "Malonate transporter, putative"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0005342 "organic acid
transmembrane transporter activity" evidence=ISS] [GO:0015849
"organic acid transport" evidence=ISS] InterPro:IPR004776
Pfam:PF03547 GO:GO:0016021 EMBL:CP000031 GenomeReviews:CP000031_GR
KO:K07088 GO:GO:0005342 RefSeq:YP_169031.1 DNASU:3196329
GeneID:3196329 KEGG:sil:SPO3843 PATRIC:23381189
HOGENOM:HOG000184220 OMA:RFGADNG ProtClustDB:CLSK934295
Uniprot:Q5LLS8
Length = 309
Score = 89 (36.4 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 36/137 (26%), Positives = 62/137 (45%)
Query: 501 LIMVWRKLIRNPNTYSSLIGLVWSLIAFRWHVSMPKIIEKSISILSDAGLGMAMFSLGLF 560
L ++ L++NP S GL+WS + + +P + ++IL A A+F++G
Sbjct: 158 LRLIGMGLLKNPMIVSISAGLIWSSL----RLPIPAPLNDFLTILGGAATPGALFAIGAS 213
Query: 561 MALQPKIIACGNSVATFSMAVRFLTGPAVMAAASIAV-GLRGTLLHVAIVQAALPQGIVP 619
+A + A +A + + + P ++A A + V + VAI AALP
Sbjct: 214 LAGRS---AERVQIAAWLSLCKLVIHPILVALAVLWVFPVDAFSASVAIAAAALPVAGNV 270
Query: 620 FVFAKEYNVHPAILSTA 636
++ A Y V P S A
Sbjct: 271 YMLAAHYGVAPQRASAA 287
Score = 88 (36.0 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 30/144 (20%), Positives = 69/144 (47%)
Query: 10 VLTAVVPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFISTNDPYAMNF 69
+ +P +V + L + + R + F+P+ + + +FV FA+ + F F +T P+A F
Sbjct: 4 IFLRTLPFFVIIGLGFWAGRT-RFFTPEATAYLTKFVFFFALSAMLFRFAATL-PFAEIF 61
Query: 70 RF-IAADTLQKIIMLFVLGIWTNFTKNGSLEWMITIFSLSTLPNTLVMGIPLLIAMYGEY 128
+ L ++ + F + + + + N +G+P+L ++GE
Sbjct: 62 NGQLVMGYLWGTAGVYGIASLVAFLRKLDVPTAAVEAQCAAIGNVGFLGLPMLAMLFGEA 121
Query: 129 S-GSLMVQVVVLQCIIWYTLLLFL 151
+ G +M+ V+ + I++ +L++ L
Sbjct: 122 AIGPVML-VLSVDLIVFSSLIVIL 144
>TIGR_CMR|SPO_3843 [details] [associations]
symbol:SPO_3843 "malonate transporter, putative"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0005342 "organic acid
transmembrane transporter activity" evidence=ISS] [GO:0006810
"transport" evidence=ISS] [GO:0016020 "membrane" evidence=ISS]
InterPro:IPR004776 Pfam:PF03547 GO:GO:0016021 EMBL:CP000031
GenomeReviews:CP000031_GR KO:K07088 GO:GO:0005342
RefSeq:YP_169031.1 DNASU:3196329 GeneID:3196329 KEGG:sil:SPO3843
PATRIC:23381189 HOGENOM:HOG000184220 OMA:RFGADNG
ProtClustDB:CLSK934295 Uniprot:Q5LLS8
Length = 309
Score = 89 (36.4 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 36/137 (26%), Positives = 62/137 (45%)
Query: 501 LIMVWRKLIRNPNTYSSLIGLVWSLIAFRWHVSMPKIIEKSISILSDAGLGMAMFSLGLF 560
L ++ L++NP S GL+WS + + +P + ++IL A A+F++G
Sbjct: 158 LRLIGMGLLKNPMIVSISAGLIWSSL----RLPIPAPLNDFLTILGGAATPGALFAIGAS 213
Query: 561 MALQPKIIACGNSVATFSMAVRFLTGPAVMAAASIAV-GLRGTLLHVAIVQAALPQGIVP 619
+A + A +A + + + P ++A A + V + VAI AALP
Sbjct: 214 LAGRS---AERVQIAAWLSLCKLVIHPILVALAVLWVFPVDAFSASVAIAAAALPVAGNV 270
Query: 620 FVFAKEYNVHPAILSTA 636
++ A Y V P S A
Sbjct: 271 YMLAAHYGVAPQRASAA 287
Score = 88 (36.0 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 30/144 (20%), Positives = 69/144 (47%)
Query: 10 VLTAVVPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFISTNDPYAMNF 69
+ +P +V + L + + R + F+P+ + + +FV FA+ + F F +T P+A F
Sbjct: 4 IFLRTLPFFVIIGLGFWAGRT-RFFTPEATAYLTKFVFFFALSAMLFRFAATL-PFAEIF 61
Query: 70 RF-IAADTLQKIIMLFVLGIWTNFTKNGSLEWMITIFSLSTLPNTLVMGIPLLIAMYGEY 128
+ L ++ + F + + + + N +G+P+L ++GE
Sbjct: 62 NGQLVMGYLWGTAGVYGIASLVAFLRKLDVPTAAVEAQCAAIGNVGFLGLPMLAMLFGEA 121
Query: 129 S-GSLMVQVVVLQCIIWYTLLLFL 151
+ G +M+ V+ + I++ +L++ L
Sbjct: 122 AIGPVML-VLSVDLIVFSSLIVIL 144
>UNIPROTKB|Q5LPV5 [details] [associations]
symbol:SPO2744 "Malonate transporter, putative"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0005342 "organic acid
transmembrane transporter activity" evidence=ISS] [GO:0015849
"organic acid transport" evidence=ISS] InterPro:IPR004776
Pfam:PF03547 GO:GO:0016021 EMBL:CP000031 GenomeReviews:CP000031_GR
KO:K07088 GO:GO:0005342 HOGENOM:HOG000184220 RefSeq:YP_167951.1
DNASU:3194137 GeneID:3194137 KEGG:sil:SPO2744 PATRIC:23378907
OMA:IFANMYG ProtClustDB:CLSK933956 Uniprot:Q5LPV5
Length = 310
Score = 93 (37.8 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 27/111 (24%), Positives = 56/111 (50%)
Query: 518 LIGLVWSLIAFRWHVSMPKIIEKSISILSDAGLGMAMFSLG-LFMALQPKIIACGNS-VA 575
++G+ I +S+P+I + ++S++ A L A+F+LG + + +P+ G++ V
Sbjct: 174 ILGIALGFIVNLSGISLPQIADDALSLIIRAALPGALFALGGVLVQYRPE----GDTRVI 229
Query: 576 TFSMAVRFLTGPAVMAAASIAVGLRGTLLHVAIVQAALPQGIVPFVFAKEY 626
+ A+ L P ++ A+ L L ++ AA+ G ++FA Y
Sbjct: 230 VYICAISLLLHPGLVWLFGSALALPQDLFRSGVLNAAMAPGFNAYIFANIY 280
Score = 78 (32.5 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 26/118 (22%), Positives = 49/118 (41%)
Query: 10 VLTAVVPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFISTNDPYAMNF 69
++ V+P+++ + Y + + F P+ G+ RF FA+P L F I+ D A
Sbjct: 5 LIDVVLPVFLVIGAGYCTT-FAGYFKPEHIDGVMRFTQGFAIPCLLFRAIANLDLNAGFD 63
Query: 70 RFIAADTLQKIIMLFVLGIW-TNFTKNGSLEWMITIFSLSTLPNTLVMGIPLLIAMYG 126
+ A + F G+ N E + I N++++G+ + YG
Sbjct: 64 PALLASFYMAAFLCFTAGLLGARLLFNRDWEDSVAIGFCCLFSNSVLLGLAITERAYG 121
>TIGR_CMR|SPO_2744 [details] [associations]
symbol:SPO_2744 "malonate transporter, putative"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0005342 "organic acid
transmembrane transporter activity" evidence=ISS] [GO:0006810
"transport" evidence=ISS] InterPro:IPR004776 Pfam:PF03547
GO:GO:0016021 EMBL:CP000031 GenomeReviews:CP000031_GR KO:K07088
GO:GO:0005342 HOGENOM:HOG000184220 RefSeq:YP_167951.1 DNASU:3194137
GeneID:3194137 KEGG:sil:SPO2744 PATRIC:23378907 OMA:IFANMYG
ProtClustDB:CLSK933956 Uniprot:Q5LPV5
Length = 310
Score = 93 (37.8 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 27/111 (24%), Positives = 56/111 (50%)
Query: 518 LIGLVWSLIAFRWHVSMPKIIEKSISILSDAGLGMAMFSLG-LFMALQPKIIACGNS-VA 575
++G+ I +S+P+I + ++S++ A L A+F+LG + + +P+ G++ V
Sbjct: 174 ILGIALGFIVNLSGISLPQIADDALSLIIRAALPGALFALGGVLVQYRPE----GDTRVI 229
Query: 576 TFSMAVRFLTGPAVMAAASIAVGLRGTLLHVAIVQAALPQGIVPFVFAKEY 626
+ A+ L P ++ A+ L L ++ AA+ G ++FA Y
Sbjct: 230 VYICAISLLLHPGLVWLFGSALALPQDLFRSGVLNAAMAPGFNAYIFANIY 280
Score = 78 (32.5 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 26/118 (22%), Positives = 49/118 (41%)
Query: 10 VLTAVVPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFISTNDPYAMNF 69
++ V+P+++ + Y + + F P+ G+ RF FA+P L F I+ D A
Sbjct: 5 LIDVVLPVFLVIGAGYCTT-FAGYFKPEHIDGVMRFTQGFAIPCLLFRAIANLDLNAGFD 63
Query: 70 RFIAADTLQKIIMLFVLGIW-TNFTKNGSLEWMITIFSLSTLPNTLVMGIPLLIAMYG 126
+ A + F G+ N E + I N++++G+ + YG
Sbjct: 64 PALLASFYMAAFLCFTAGLLGARLLFNRDWEDSVAIGFCCLFSNSVLLGLAITERAYG 121
>TIGR_CMR|SO_3461 [details] [associations]
symbol:SO_3461 "transporter, putative" species:211586
"Shewanella oneidensis MR-1" [GO:0005215 "transporter activity"
evidence=ISS] [GO:0006810 "transport" evidence=ISS]
InterPro:IPR004776 Pfam:PF03547 GO:GO:0016021 GO:GO:0055085
EMBL:AE014299 GenomeReviews:AE014299_GR KO:K07088
HOGENOM:HOG000184220 RefSeq:NP_719010.1 GeneID:1171137
KEGG:son:SO_3461 PATRIC:23526618 OMA:REAHITS ProtClustDB:CLSK907179
Uniprot:Q8EBP8
Length = 319
Score = 94 (38.1 bits), Expect = 9.2e-05, Sum P(2) = 9.2e-05
Identities = 34/148 (22%), Positives = 67/148 (45%)
Query: 11 LTAVVPLYVAM-ILAYGSVRWWKIFSPDQCSGI-NRFVAIFAVPLLSFHFISTND-PYAM 67
+T + PL+ I+ G++ F P + + N++V A P + ++ +
Sbjct: 1 MTILTPLFAVFGIMLLGTLVQKLRFLPVETDQVLNQYVYYIAFPAVLLIALAQQPIEEIL 60
Query: 68 NFRFIAA-DTLQKIIMLFVLGIWTNFTKNGSLEWMITIFSLS-TLPNTLVMGIPLLIAMY 125
+RFIA +I L +GI + N + + +L+ T NT +GIPLL+ ++
Sbjct: 61 QWRFIAGYSAAMLVIYLMCIGI--SLLVNPKQHAIAAVRALNATFGNTAFIGIPLLVIIF 118
Query: 126 GEYSGSLMVQVVVLQCIIWYTLLLFLFE 153
E +L+ + L ++ + + L E
Sbjct: 119 PEQQSALVAAIASLLSVLMFAVALVSLE 146
Score = 75 (31.5 bits), Expect = 9.2e-05, Sum P(2) = 9.2e-05
Identities = 25/134 (18%), Positives = 62/134 (46%)
Query: 501 LIMVWRKLIRNPNTYSSLIGLVWSLIAFRWHVSMPKIIEKSISILSDAGLGMAMFSLGLF 560
++++ + +NP IG+ S + +++P + I + + A+F++G+
Sbjct: 158 VVIMCLAITKNPIVIGCFIGISISALG----ITLPSGVALMIQQIGNTSSPCALFAVGMV 213
Query: 561 MAL------QPKIIACGNSVATFSMAV-RFLTGPAVMAAASIAVGLRGTLLHVAIVQAAL 613
+A K+ + N V + + + + PA++ ++G+ G L + ++ +AL
Sbjct: 214 LAKAMRYQKDSKLFSLTNFVELCLINLFKLILQPALVFFMLKSIGVTGDYLVMGVILSAL 273
Query: 614 PQGIVPFVFAKEYN 627
P ++ A+ YN
Sbjct: 274 PTAASVYLLAQRYN 287
>TIGR_CMR|SPO_3413 [details] [associations]
symbol:SPO_3413 "auxin efflux carrier family protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0005215 "transporter
activity" evidence=ISS] [GO:0006810 "transport" evidence=ISS]
[GO:0016020 "membrane" evidence=ISS] InterPro:IPR004776
Pfam:PF03547 GO:GO:0016021 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0055085 KO:K07088 RefSeq:YP_168609.1 DNASU:3195296
GeneID:3195296 KEGG:sil:SPO3413 PATRIC:23380283
HOGENOM:HOG000247163 OMA:QLIFSHN ProtClustDB:CLSK934150
Uniprot:Q5LMZ9
Length = 293
Score = 95 (38.5 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 26/121 (21%), Positives = 60/121 (49%)
Query: 507 KLIRNPNTYSSLIGLVWSLIAFRWHVSMPKIIEKSISILSDAGLGMAMFSLGLFMA-LQP 565
K++R P +++L+G ++ ++ W P+ + ++ ++ + + + +LG+ MA L
Sbjct: 151 KVVREPMVWATLLGALF--LSQDWQT--PRFLTNALELIGQMAVPLMLITLGVAMARLSI 206
Query: 566 KIIACGNSVATFSMAVRFLTGPAVMAAASIAVGLRGTLLHVAIVQAALPQGIVPFVFAKE 625
+ I ++ +A+ F G V GL G L V +VQ ++P + ++ A+
Sbjct: 207 RRIGQALGLSLLKLAICFPVGWLVAQG----FGLSGPALGVLVVQMSVPAAVSAYLLAER 262
Query: 626 Y 626
+
Sbjct: 263 F 263
Score = 67 (28.6 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 27/118 (22%), Positives = 49/118 (41%)
Query: 10 VLTAVVPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSF-HFISTNDPYAMN 68
VL V P+++ + +G W ++ + + R + AVP L F + T P
Sbjct: 7 VLEIVAPVFLLAAVGFG---WVRMGFEYRLQFVTRLGTMLAVPCLIFVALMKTEIPGGDL 63
Query: 69 FRFIAADTLQKIIMLFVLGIWTNFTKNGSLEWMITIFSLSTLPNTLVMGIPLLIAMYG 126
RF A L + + V G+ F+ ++ + NT +G+PL + +G
Sbjct: 64 SRFTLASALAILALTVVFGLIVRFSGLDRRTYLPPLL----FGNTGNLGLPLCMFAFG 117
>UNIPROTKB|P0AA49 [details] [associations]
symbol:yfdV "YfdV AEC Transporter" species:83333
"Escherichia coli K-12" [GO:0055085 "transmembrane transport"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR004776 Pfam:PF03547 GO:GO:0016021 GO:GO:0005886
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0055085 eggNOG:COG0679 KO:K07088
PIR:A65011 RefSeq:NP_416873.1 RefSeq:YP_490614.1
ProteinModelPortal:P0AA49 IntAct:P0AA49 PRIDE:P0AA49 DNASU:949110
EnsemblBacteria:EBESCT00000003302 EnsemblBacteria:EBESCT00000016557
GeneID:12930555 GeneID:949110 KEGG:ecj:Y75_p2339 KEGG:eco:b2372
PATRIC:32120123 EchoBASE:EB3896 EcoGene:EG14144
HOGENOM:HOG000122890 OMA:IWNTFFR ProtClustDB:PRK09903
BioCyc:EcoCyc:B2372-MONOMER BioCyc:ECOL316407:JW2369-MONOMER
Genevestigator:P0AA49 Uniprot:P0AA49
Length = 314
Score = 81 (33.6 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 23/120 (19%), Positives = 54/120 (45%)
Query: 510 RNPNTYSSLIGLVWSLIAFRWHVSMPKIIEKSISILSDAGLGMAMFSLGLFMALQPKIIA 569
+ P ++ ++ + L+ V +P + + ++++ A G+A+F+ GL +A +
Sbjct: 172 KEPVVWAPVLATILVLVG----VKIPAAWDPTFNLIAKANSGVAVFAAGLTLAAHKFEFS 227
Query: 570 CGNSVATFSMAVRFLTGPAVMAAASIAVGLRGTLLHVAIVQAALPQGIVPFVFAKEYNVH 629
+ TF ++ + P + +A L L + ++ ALP + A +NV+
Sbjct: 228 AEIAYNTF---LKLILMPLALLLVGMACHLNSEHLQMMVLAGALPPAFSGIIIASRFNVY 284
Score = 80 (33.2 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 37/133 (27%), Positives = 59/133 (44%)
Query: 14 VVPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFISTNDPYAMNFRFIA 73
++P+ V M+L Y S R + FS DQ N+ V +A+P F I+ N I
Sbjct: 9 LLPIIVIMLLGYFSGRR-ETFSEDQARAFNKLVLNYALPAALFVSITR-----ANREMIF 62
Query: 74 ADTLQKIIMLFVL-GI----WTN---FTKNGSLEWMITIFSLSTLPNTLVMGIPLLIAMY 125
ADT ++ L V+ G W F K E + ++ P +G +L +Y
Sbjct: 63 ADTRLTLVSLVVIVGCFFFSWFGCYKFFKRTHAEAAVCAL-IAGSPTIGFLGFAVLDPIY 121
Query: 126 GE-YSGSLMVQVV 137
G+ S L+V ++
Sbjct: 122 GDSVSTGLVVAII 134
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.135 0.407 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 636 613 0.00088 120 3 11 22 0.38 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 17
No. of states in DFA: 620 (66 KB)
Total size of DFA: 329 KB (2165 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 50.91u 0.15s 51.06t Elapsed: 00:00:03
Total cpu time: 50.91u 0.15s 51.06t Elapsed: 00:00:03
Start: Fri May 10 00:13:08 2013 End: Fri May 10 00:13:11 2013