Query 006677
Match_columns 635
No_of_seqs 611 out of 5070
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 06:00:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006677.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006677hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4aoj_A High affinity nerve gro 100.0 3E-52 1E-56 429.5 21.1 252 343-615 46-321 (329)
2 4gt4_A Tyrosine-protein kinase 100.0 2.8E-52 9.7E-57 425.7 19.3 249 343-612 31-305 (308)
3 3omv_A RAF proto-oncogene seri 100.0 8.6E-52 2.9E-56 420.4 22.0 251 342-615 40-302 (307)
4 4asz_A BDNF/NT-3 growth factor 100.0 1.2E-52 4.2E-57 426.6 14.0 252 343-615 18-291 (299)
5 3hmm_A TGF-beta receptor type- 100.0 1.3E-51 4.4E-56 421.6 14.0 261 343-615 8-299 (303)
6 4fih_A Serine/threonine-protei 100.0 1.3E-50 4.4E-55 416.9 18.4 240 343-607 79-324 (346)
7 4g3f_A NF-kappa-beta-inducing 100.0 3.1E-50 1.1E-54 412.8 19.6 246 343-616 63-319 (336)
8 4ase_A Vascular endothelial gr 100.0 1.8E-50 6E-55 419.7 17.4 257 342-617 68-351 (353)
9 3fpq_A Serine/threonine-protei 100.0 1.7E-49 5.7E-54 400.6 23.1 241 344-607 32-283 (290)
10 4b9d_A Serine/threonine-protei 100.0 9.7E-50 3.3E-54 411.0 19.3 241 343-607 29-277 (350)
11 4fie_A Serine/threonine-protei 100.0 2.1E-49 7.2E-54 417.8 18.7 240 343-607 156-401 (423)
12 4aw0_A HPDK1, 3-phosphoinositi 100.0 4E-49 1.4E-53 399.7 14.5 238 343-607 37-285 (311)
13 3hyh_A Carbon catabolite-derep 100.0 2E-48 7E-53 389.2 18.9 237 343-607 18-263 (275)
14 3ubd_A Ribosomal protein S6 ki 100.0 1.3E-48 4.6E-53 396.0 12.3 237 343-606 29-281 (304)
15 4g31_A Eukaryotic translation 100.0 4.4E-47 1.5E-51 386.3 16.8 240 343-607 10-280 (299)
16 4b99_A Mitogen-activated prote 100.0 4.8E-44 1.7E-48 377.7 24.7 249 343-607 59-345 (398)
17 4f9c_A Cell division cycle 7-r 100.0 1.5E-44 5E-49 377.6 20.3 187 343-541 26-250 (361)
18 2qkw_B Protein kinase; three-h 100.0 6.7E-43 2.3E-47 361.4 24.5 267 343-615 44-317 (321)
19 3v5w_A G-protein coupled recep 100.0 2.3E-43 8E-48 387.9 18.0 241 343-607 194-450 (689)
20 3uto_A Twitchin; kinase, muscl 100.0 3.1E-43 1.1E-47 389.5 17.4 243 343-607 162-411 (573)
21 3uim_A Brassinosteroid insensi 100.0 9.3E-43 3.2E-47 361.0 17.5 278 332-612 19-310 (326)
22 3soc_A Activin receptor type-2 100.0 6.9E-43 2.4E-47 361.5 16.0 257 343-615 29-320 (322)
23 3p86_A Serine/threonine-protei 100.0 6.6E-42 2.3E-46 351.9 18.1 253 343-616 42-301 (309)
24 4hcu_A Tyrosine-protein kinase 100.0 2.3E-41 7.9E-46 340.6 20.6 247 343-614 15-267 (269)
25 3s95_A LIMK-1, LIM domain kina 100.0 1.8E-41 6.3E-46 348.8 20.3 249 343-617 15-286 (310)
26 2psq_A Fibroblast growth facto 100.0 2E-41 6.9E-46 357.2 19.8 254 343-616 86-367 (370)
27 3fxz_A Serine/threonine-protei 100.0 2.4E-41 8.3E-46 345.7 19.2 240 343-607 25-270 (297)
28 3kul_A Ephrin type-A receptor 100.0 2.4E-41 8E-46 350.4 18.3 254 343-621 54-321 (325)
29 3sxs_A Cytoplasmic tyrosine-pr 100.0 3.7E-41 1.3E-45 338.9 18.9 248 343-615 13-266 (268)
30 3gen_A Tyrosine-protein kinase 100.0 7.7E-41 2.6E-45 339.3 20.7 248 343-615 29-282 (283)
31 2nru_A Interleukin-1 receptor- 100.0 3.5E-40 1.2E-44 338.6 25.2 270 332-613 14-306 (307)
32 3q4u_A Activin receptor type-1 100.0 6.4E-41 2.2E-45 342.9 19.0 251 343-611 13-300 (301)
33 2c30_A Serine/threonine-protei 100.0 1.7E-40 6E-45 343.2 21.8 239 344-607 51-295 (321)
34 2izr_A Casein kinase I isoform 100.0 2.2E-40 7.6E-45 343.9 22.2 253 343-615 14-283 (330)
35 3tt0_A Basic fibroblast growth 100.0 2.3E-40 7.9E-45 350.8 21.9 261 343-623 74-362 (382)
36 1qcf_A Haematopoetic cell kina 100.0 7.5E-41 2.6E-45 362.6 18.1 248 343-615 193-446 (454)
37 3fe3_A MAP/microtubule affinit 100.0 1.6E-40 5.5E-45 344.1 19.0 238 343-607 20-265 (328)
38 1csn_A Casein kinase-1; phosph 100.0 4.1E-40 1.4E-44 336.4 21.8 255 343-616 15-286 (298)
39 1k9a_A Carboxyl-terminal SRC k 100.0 2.3E-40 7.8E-45 358.3 20.8 247 343-615 198-447 (450)
40 2qol_A Ephrin receptor; recept 100.0 1.3E-40 4.6E-45 351.1 17.3 248 343-615 50-311 (373)
41 1opk_A P150, C-ABL, proto-onco 100.0 1.1E-40 3.9E-45 364.8 17.2 248 343-614 225-479 (495)
42 3mdy_A Bone morphogenetic prot 100.0 4.2E-40 1.4E-44 342.5 20.7 259 343-616 42-334 (337)
43 4eqm_A Protein kinase; transfe 100.0 1.1E-39 3.9E-44 332.8 23.0 254 343-618 16-280 (294)
44 3niz_A Rhodanese family protei 100.0 2E-40 6.9E-45 341.2 17.5 253 343-607 26-301 (311)
45 3cbl_A C-FES, proto-oncogene t 100.0 5.8E-41 2E-45 354.7 13.7 247 343-614 119-375 (377)
46 3t9t_A Tyrosine-protein kinase 100.0 4.7E-40 1.6E-44 330.4 19.7 247 343-614 13-265 (267)
47 3dtc_A Mitogen-activated prote 100.0 1.6E-40 5.6E-45 334.6 16.2 245 343-611 12-271 (271)
48 4dc2_A Protein kinase C IOTA t 100.0 8.2E-40 2.8E-44 346.3 22.3 245 343-606 57-318 (396)
49 3zgw_A Maternal embryonic leuc 100.0 2.5E-40 8.5E-45 344.9 17.9 239 343-608 15-262 (347)
50 2yab_A Death-associated protei 100.0 1E-39 3.6E-44 342.2 22.5 241 343-606 17-272 (361)
51 4euu_A Serine/threonine-protei 100.0 2.2E-39 7.6E-44 334.7 24.4 264 343-614 14-310 (319)
52 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 2.8E-40 9.7E-45 357.7 18.5 248 343-615 189-442 (452)
53 1tki_A Titin; serine kinase, m 100.0 3.5E-40 1.2E-44 340.8 18.3 243 343-607 10-258 (321)
54 1o6l_A RAC-beta serine/threoni 100.0 2.2E-39 7.4E-44 336.7 24.4 238 343-607 10-261 (337)
55 3vhe_A Vascular endothelial gr 100.0 9.6E-41 3.3E-45 350.7 14.2 254 343-615 27-357 (359)
56 3lb7_A RAF proto-oncogene seri 100.0 1.2E-39 4E-44 334.8 21.8 252 342-616 40-303 (307)
57 3ugc_A Tyrosine-protein kinase 100.0 1.5E-40 5.2E-45 339.4 15.1 255 343-615 15-293 (295)
58 3kn6_A Ribosomal protein S6 ki 100.0 4.8E-40 1.6E-44 340.5 18.5 247 343-607 16-271 (325)
59 2y0a_A Death-associated protei 100.0 5.9E-40 2E-44 340.0 18.8 243 342-607 15-272 (326)
60 3poz_A Epidermal growth factor 100.0 1.1E-40 3.6E-45 345.8 13.1 246 343-614 20-279 (327)
61 3tki_A Serine/threonine-protei 100.0 4.1E-40 1.4E-44 340.7 17.3 241 343-607 12-262 (323)
62 1nxk_A MAP kinase-activated pr 100.0 1.4E-39 4.8E-44 346.5 21.8 245 344-608 68-323 (400)
63 3txo_A PKC-L, NPKC-ETA, protei 100.0 4.3E-40 1.5E-44 344.2 16.8 238 343-606 28-280 (353)
64 3h4j_B AMPK kdaid, SNF1-like p 100.0 5.8E-40 2E-44 340.7 17.7 237 343-607 14-259 (336)
65 3l9p_A Anaplastic lymphoma kin 100.0 2.6E-40 8.8E-45 348.4 15.2 252 343-615 76-347 (367)
66 3op5_A Serine/threonine-protei 100.0 8.7E-40 3E-44 344.2 19.1 256 343-616 40-332 (364)
67 3uc3_A Serine/threonine-protei 100.0 1.1E-39 3.6E-44 342.8 19.4 244 343-607 25-275 (361)
68 3kex_A Receptor tyrosine-prote 100.0 1.5E-40 5.3E-45 344.3 12.7 246 343-614 18-277 (325)
69 1luf_A Muscle-specific tyrosin 100.0 4.8E-40 1.6E-44 343.0 16.3 253 343-616 52-338 (343)
70 2zv2_A Calcium/calmodulin-depe 100.0 9.5E-40 3.3E-44 334.0 18.2 239 343-607 18-293 (298)
71 3a8x_A Protein kinase C IOTA t 100.0 2.4E-39 8.1E-44 337.8 21.1 245 343-606 14-275 (345)
72 4f0f_A Serine/threonine-protei 100.0 1.8E-39 6E-44 330.1 19.5 247 343-611 24-287 (287)
73 1rjb_A FL cytokine receptor; k 100.0 4.9E-40 1.7E-44 343.2 15.7 259 342-619 49-340 (344)
74 2eva_A TAK1 kinase - TAB1 chim 100.0 3.1E-39 1.1E-43 331.7 21.1 253 343-617 13-267 (307)
75 2bdw_A Hypothetical protein K1 100.0 3.8E-39 1.3E-43 338.6 22.2 242 343-607 34-285 (362)
76 3c0i_A Peripheral plasma membr 100.0 1.6E-39 5.4E-44 340.3 19.0 245 342-606 28-286 (351)
77 1t46_A HOMO sapiens V-KIT hard 100.0 7.6E-40 2.6E-44 336.9 16.3 255 343-616 28-310 (313)
78 3qd2_B Eukaryotic translation 100.0 1.9E-39 6.6E-44 336.5 19.4 240 343-607 11-326 (332)
79 1fot_A TPK1 delta, CAMP-depend 100.0 2.3E-39 8E-44 333.9 19.5 238 343-607 11-259 (318)
80 2h8h_A Proto-oncogene tyrosine 100.0 9.3E-40 3.2E-44 360.8 17.7 249 342-615 271-525 (535)
81 1qpc_A LCK kinase; alpha beta 100.0 2.1E-39 7.1E-44 328.1 18.8 249 343-616 18-272 (279)
82 3llt_A Serine/threonine kinase 100.0 3.7E-40 1.3E-44 346.4 13.8 193 343-542 40-263 (360)
83 3soa_A Calcium/calmodulin-depe 100.0 3.5E-39 1.2E-43 347.1 21.7 242 343-607 16-268 (444)
84 3uzp_A CKI-delta, CKID, casein 100.0 1.2E-38 4.3E-43 325.1 24.5 255 343-617 14-284 (296)
85 3kmu_A ILK, integrin-linked ki 100.0 2.8E-39 9.6E-44 325.3 19.4 248 343-613 15-270 (271)
86 4fvq_A Tyrosine-protein kinase 100.0 8.1E-40 2.8E-44 332.8 15.5 248 343-616 13-278 (289)
87 3qup_A Tyrosine-protein kinase 100.0 7.6E-40 2.6E-44 338.7 15.5 255 343-618 28-303 (323)
88 3p1a_A MYT1 kinase, membrane-a 100.0 2E-39 6.9E-44 333.7 18.5 237 343-607 62-305 (311)
89 1xjd_A Protein kinase C, theta 100.0 1.3E-39 4.3E-44 339.4 16.8 238 343-606 22-269 (345)
90 1mp8_A Focal adhesion kinase 1 100.0 1.1E-39 3.9E-44 330.5 16.1 246 343-614 20-277 (281)
91 1u5q_A Serine/threonine protei 100.0 4.1E-39 1.4E-43 336.5 20.7 242 343-609 59-308 (348)
92 2pvf_A Fibroblast growth facto 100.0 3.7E-39 1.3E-43 335.3 20.2 258 342-619 39-324 (334)
93 4fr4_A YANK1, serine/threonine 100.0 2.7E-39 9.2E-44 341.2 19.3 240 343-606 20-271 (384)
94 2ivs_A Proto-oncogene tyrosine 100.0 1.3E-39 4.4E-44 335.3 16.5 252 342-614 27-312 (314)
95 1ob3_A PFPK5, cell division co 100.0 6.1E-40 2.1E-44 333.8 13.7 253 343-607 7-281 (288)
96 3gxj_A TGF-beta receptor type- 100.0 2.2E-41 7.6E-46 346.6 2.9 255 343-615 8-299 (303)
97 3v8s_A RHO-associated protein 100.0 1.7E-39 5.9E-44 345.6 17.5 241 343-607 74-330 (410)
98 3kfa_A Tyrosine-protein kinase 100.0 1.1E-39 3.9E-44 331.5 15.5 249 343-615 18-273 (288)
99 3c1x_A Hepatocyte growth facto 100.0 9.6E-40 3.3E-44 344.3 15.4 253 343-620 94-362 (373)
100 2x4f_A Myosin light chain kina 100.0 2E-39 6.8E-44 342.1 17.8 247 343-611 94-349 (373)
101 2ozo_A Tyrosine-protein kinase 100.0 3.8E-39 1.3E-43 361.0 21.0 247 345-617 343-602 (613)
102 4hgt_A Casein kinase I isoform 100.0 9E-39 3.1E-43 326.0 21.9 254 343-616 14-283 (296)
103 3g2f_A Bone morphogenetic prot 100.0 2.1E-39 7.2E-44 337.2 17.5 267 343-625 18-330 (336)
104 4e5w_A Tyrosine-protein kinase 100.0 1.9E-39 6.4E-44 332.3 16.6 252 343-612 26-301 (302)
105 3pls_A Macrophage-stimulating 100.0 4.5E-39 1.5E-43 328.7 19.3 253 343-619 26-293 (298)
106 2w4o_A Calcium/calmodulin-depe 100.0 5.4E-39 1.9E-43 335.9 20.3 242 343-607 58-306 (349)
107 1mqb_A Ephrin type-A receptor 100.0 4.6E-39 1.6E-43 334.4 19.5 249 343-616 49-312 (333)
108 3lxp_A Non-receptor tyrosine-p 100.0 1.6E-39 5.5E-44 335.6 16.0 258 343-620 36-317 (318)
109 3gni_B Strad alpha; kinase fol 100.0 1E-38 3.4E-43 339.2 22.5 261 343-612 30-341 (389)
110 1u59_A Tyrosine-protein kinase 100.0 4.8E-39 1.6E-43 327.0 19.1 248 344-617 16-276 (287)
111 2v62_A Serine/threonine-protei 100.0 1.9E-39 6.6E-44 339.0 16.5 256 343-615 42-330 (345)
112 2ac3_A MAP kinase-interacting 100.0 7.2E-39 2.5E-43 330.2 20.4 248 344-607 19-296 (316)
113 1b6c_B TGF-B superfamily recep 100.0 4.3E-39 1.5E-43 335.6 18.8 256 343-616 47-339 (342)
114 3og7_A AKAP9-BRAF fusion prote 100.0 4.6E-39 1.6E-43 327.4 18.6 248 343-613 29-288 (289)
115 3e7e_A HBUB1, BUB1A, mitotic c 100.0 5.8E-39 2E-43 338.0 19.9 248 343-617 70-343 (365)
116 2i0e_A Protein kinase C-beta I 100.0 4.2E-39 1.4E-43 336.5 18.5 239 343-607 25-277 (353)
117 4aw2_A Serine/threonine-protei 100.0 2.2E-39 7.4E-44 347.5 16.5 244 343-607 79-339 (437)
118 3g33_A Cell division protein k 100.0 4.6E-39 1.6E-43 330.5 18.2 252 343-607 14-297 (308)
119 4eut_A Serine/threonine-protei 100.0 8.3E-39 2.8E-43 340.5 20.4 265 343-615 14-311 (396)
120 3a62_A Ribosomal protein S6 ki 100.0 7.4E-39 2.5E-43 331.9 19.2 238 343-607 22-277 (327)
121 1kob_A Twitchin; kinase, intra 100.0 6.6E-39 2.3E-43 339.1 19.1 243 343-607 56-305 (387)
122 1rdq_E PKA C-alpha, CAMP-depen 100.0 5.2E-39 1.8E-43 335.8 18.1 238 343-607 46-294 (350)
123 1fvr_A Tyrosine-protein kinase 100.0 1.2E-38 4.1E-43 330.4 20.7 255 343-617 30-304 (327)
124 3o0g_A Cell division protein k 100.0 1.2E-38 4.1E-43 324.9 20.3 251 343-607 7-283 (292)
125 3lzb_A Epidermal growth factor 100.0 2.7E-39 9.2E-44 335.2 15.7 246 343-614 20-279 (327)
126 3f66_A Hepatocyte growth facto 100.0 4.2E-39 1.4E-43 329.1 16.9 250 343-617 30-295 (298)
127 2zmd_A Dual specificity protei 100.0 2.1E-38 7.2E-43 336.4 22.7 240 343-607 61-321 (390)
128 2acx_A G protein-coupled recep 100.0 9.4E-39 3.2E-43 350.8 20.5 244 343-607 189-445 (576)
129 2xir_A Vascular endothelial gr 100.0 4.2E-39 1.4E-43 331.8 16.6 255 343-616 32-313 (316)
130 2qr7_A Ribosomal protein S6 ki 100.0 2.2E-39 7.6E-44 337.6 14.5 243 343-607 27-278 (342)
131 3dbq_A Dual specificity protei 100.0 2.2E-38 7.4E-43 330.7 22.0 241 343-608 14-275 (343)
132 3oz6_A Mitogen-activated prote 100.0 2.2E-38 7.7E-43 336.4 22.4 190 343-542 14-235 (388)
133 3cok_A Serine/threonine-protei 100.0 5.1E-39 1.7E-43 325.1 16.6 239 343-607 16-263 (278)
134 3mtl_A Cell division protein k 100.0 1.8E-39 6.3E-44 336.1 13.5 279 343-633 7-310 (324)
135 3ork_A Serine/threonine protei 100.0 5.4E-39 1.9E-43 330.6 16.7 256 343-621 17-289 (311)
136 3ll6_A Cyclin G-associated kin 100.0 4.6E-39 1.6E-43 334.4 16.0 252 343-618 33-313 (337)
137 3cc6_A Protein tyrosine kinase 100.0 3.9E-39 1.3E-43 326.5 15.0 246 343-614 17-274 (281)
138 2pmi_A Negative RE, cyclin-dep 100.0 3E-39 1E-43 333.4 14.4 257 343-607 10-294 (317)
139 4fl3_A Tyrosine-protein kinase 100.0 6.7E-39 2.3E-43 359.9 18.4 243 344-613 375-631 (635)
140 3lxl_A Tyrosine-protein kinase 100.0 1.8E-39 6.1E-44 336.6 12.6 258 343-618 28-308 (327)
141 3brb_A Proto-oncogene tyrosine 100.0 7.7E-39 2.6E-43 329.6 17.2 254 342-616 38-311 (313)
142 2a19_B Interferon-induced, dou 100.0 6E-39 2.1E-43 325.3 16.1 243 343-617 16-278 (284)
143 4agu_A Cyclin-dependent kinase 100.0 4.8E-39 1.6E-43 330.8 15.6 253 343-607 8-285 (311)
144 3sv0_A Casein kinase I-like; t 100.0 2.5E-38 8.7E-43 343.3 22.0 254 343-615 12-280 (483)
145 2vd5_A DMPK protein; serine/th 100.0 3.6E-39 1.2E-43 343.4 14.8 242 343-607 66-328 (412)
146 2wqm_A Serine/threonine-protei 100.0 2.8E-38 9.7E-43 324.9 20.9 256 343-617 37-301 (310)
147 3fdn_A Serine/threonine-protei 100.0 2.3E-38 7.7E-43 320.5 19.6 238 343-607 14-258 (279)
148 2a2a_A Death-associated protei 100.0 5.1E-38 1.7E-42 324.8 22.5 243 342-607 16-273 (321)
149 3is5_A Calcium-dependent prote 100.0 3.2E-38 1.1E-42 320.6 20.4 244 343-607 27-279 (285)
150 2h34_A Serine/threonine-protei 100.0 4.2E-38 1.4E-42 323.6 21.3 251 343-617 39-300 (309)
151 2y94_A 5'-AMP-activated protei 100.0 1.5E-38 5.2E-43 344.4 18.9 238 343-607 21-267 (476)
152 3lm5_A Serine/threonine-protei 100.0 3.1E-38 1.1E-42 327.3 20.3 245 343-607 34-288 (327)
153 2buj_A Serine/threonine-protei 100.0 6.7E-39 2.3E-43 330.6 15.0 256 343-618 34-311 (317)
154 2jii_A Serine/threonine-protei 100.0 2.4E-38 8.2E-43 331.6 19.4 256 343-617 47-340 (352)
155 1byg_A CSK, protein (C-termina 100.0 6.2E-39 2.1E-43 324.5 14.1 247 343-615 26-275 (278)
156 3c4z_A Rhodopsin kinase; Ser/T 100.0 4.4E-38 1.5E-42 344.7 22.0 244 344-606 191-448 (543)
157 2i1m_A Macrophage colony-stimu 100.0 1.2E-39 4.2E-44 338.7 9.1 254 343-615 51-328 (333)
158 1xbb_A Tyrosine-protein kinase 100.0 2.6E-38 9E-43 322.2 18.7 245 344-615 23-281 (291)
159 1wak_A Serine/threonine-protei 100.0 2.3E-38 7.9E-43 336.9 18.8 258 343-607 42-392 (397)
160 2yex_A Serine/threonine-protei 100.0 5.3E-38 1.8E-42 317.0 20.5 241 343-607 12-262 (276)
161 3bhy_A Death-associated protei 100.0 9.6E-38 3.3E-42 316.4 22.4 250 343-615 10-276 (283)
162 3kk8_A Calcium/calmodulin depe 100.0 6.4E-38 2.2E-42 317.9 20.8 242 343-607 11-262 (284)
163 3f3z_A Calcium/calmodulin-depe 100.0 7.6E-38 2.6E-42 316.3 21.2 240 343-606 14-261 (277)
164 3dls_A PAS domain-containing s 100.0 2E-38 6.8E-43 329.7 17.3 232 343-607 29-275 (335)
165 3hko_A Calcium/calmodulin-depe 100.0 2.7E-38 9.2E-43 330.1 18.3 251 343-611 31-337 (345)
166 4ejn_A RAC-alpha serine/threon 100.0 1.3E-38 4.4E-43 344.4 16.0 237 343-606 153-404 (446)
167 3kvw_A DYRK2, dual specificity 100.0 1.1E-38 3.6E-43 342.9 15.2 193 343-542 102-303 (429)
168 1vzo_A Ribosomal protein S6 ki 100.0 1.6E-38 5.4E-43 333.3 16.2 244 343-608 59-323 (355)
169 1x8b_A WEE1HU, WEE1-like prote 100.0 3.6E-38 1.2E-42 320.0 18.3 241 343-607 16-280 (289)
170 3q60_A ROP5B; pseudokinase, tr 100.0 2.3E-39 8E-44 341.8 9.9 247 343-606 67-352 (371)
171 2r5t_A Serine/threonine-protei 100.0 1.3E-38 4.4E-43 335.2 15.5 235 343-603 43-286 (373)
172 3ttj_A Mitogen-activated prote 100.0 3.2E-38 1.1E-42 342.1 18.9 251 343-607 67-356 (464)
173 3byv_A Rhoptry kinase; malaria 100.0 6.6E-40 2.3E-44 346.8 5.2 243 343-612 78-367 (377)
174 3rgf_A Cyclin-dependent kinase 100.0 4.1E-38 1.4E-42 336.2 19.1 203 335-543 18-241 (405)
175 2eue_A Carbon catabolite derep 100.0 3.2E-38 1.1E-42 318.7 17.3 237 343-607 18-263 (275)
176 3i6u_A CDS1, serine/threonine- 100.0 8.5E-38 2.9E-42 334.9 21.4 242 343-607 140-400 (419)
177 1p4o_A Insulin-like growth fac 100.0 1.5E-38 5.2E-43 328.7 14.7 252 343-615 30-301 (322)
178 4aaa_A Cyclin-dependent kinase 100.0 8E-38 2.7E-42 324.7 19.8 254 343-607 30-307 (331)
179 3nsz_A CK II alpha, casein kin 100.0 6.6E-38 2.2E-42 325.1 19.1 250 343-607 41-320 (330)
180 2vgo_A Serine/threonine-protei 100.0 1.2E-37 4.1E-42 316.0 20.5 238 343-607 19-263 (284)
181 1t4h_A Serine/threonine-protei 100.0 2.5E-37 8.7E-42 314.7 22.9 242 343-607 31-283 (290)
182 2y7j_A Phosphorylase B kinase 100.0 1.9E-37 6.4E-42 326.3 22.2 243 343-607 99-360 (365)
183 2w1i_A JAK2; chromosomal rearr 100.0 2.5E-38 8.5E-43 327.9 15.3 254 343-614 46-323 (326)
184 1cm8_A Phosphorylated MAP kina 100.0 1.7E-38 5.8E-43 334.4 14.0 251 343-612 30-315 (367)
185 3mi9_A Cell division protein k 100.0 4.2E-38 1.4E-42 329.6 16.8 253 343-607 22-312 (351)
186 1z57_A Dual specificity protei 100.0 3.4E-38 1.2E-42 328.0 15.9 254 343-607 19-329 (339)
187 3mwu_A Calmodulin-domain prote 100.0 2E-37 7E-42 338.8 22.6 241 343-607 27-277 (486)
188 2x7f_A TRAF2 and NCK-interacti 100.0 1.3E-37 4.5E-42 322.2 19.8 243 343-607 29-287 (326)
189 2jam_A Calcium/calmodulin-depe 100.0 1.6E-37 5.4E-42 318.4 20.2 242 343-607 14-262 (304)
190 1q8y_A SR protein kinase; tran 100.0 1.5E-37 5.2E-42 328.0 20.6 258 343-607 24-334 (373)
191 3eqc_A Dual specificity mitoge 100.0 5.9E-38 2E-42 329.7 17.2 191 343-542 38-234 (360)
192 1u46_A ACK-1, activated CDC42 100.0 1.6E-38 5.5E-43 323.4 12.2 250 343-617 23-288 (291)
193 3com_A Serine/threonine-protei 100.0 1.2E-37 4.1E-42 320.8 18.8 240 343-606 34-278 (314)
194 3rp9_A Mitogen-activated prote 100.0 7.5E-38 2.6E-42 339.7 18.1 181 343-533 58-279 (458)
195 2rku_A Serine/threonine-protei 100.0 9.2E-38 3.2E-42 318.6 17.5 238 343-607 20-266 (294)
196 3pfq_A PKC-B, PKC-beta, protei 100.0 7E-38 2.4E-42 354.0 18.2 238 343-606 346-597 (674)
197 2yfx_A Tyrosine-protein kinase 100.0 5.3E-38 1.8E-42 325.5 15.7 252 343-615 35-306 (327)
198 3a7i_A MST3 kinase, serine/thr 100.0 2E-37 6.9E-42 317.5 19.8 240 343-609 27-273 (303)
199 1ua2_A CAK, cell division prot 100.0 1.3E-37 4.6E-42 325.1 18.5 250 343-607 15-292 (346)
200 2clq_A Mitogen-activated prote 100.0 7.5E-38 2.6E-42 319.1 16.2 243 344-607 28-279 (295)
201 2ycf_A Serine/threonine-protei 100.0 3.7E-37 1.2E-41 318.5 21.2 241 343-606 15-274 (322)
202 3q5i_A Protein kinase; CDPK, m 100.0 2.8E-37 9.7E-42 339.1 21.5 241 343-607 41-302 (504)
203 3nyv_A Calmodulin-domain prote 100.0 9.8E-38 3.3E-42 341.3 16.9 241 343-607 31-282 (484)
204 2h6d_A 5'-AMP-activated protei 100.0 3.4E-37 1.2E-41 311.2 19.5 238 343-607 16-262 (276)
205 3n9x_A Phosphotransferase; mal 100.0 4.6E-37 1.6E-41 330.7 21.7 187 343-539 31-253 (432)
206 3pg1_A Mitogen-activated prote 100.0 2.7E-37 9.1E-42 324.9 19.3 250 343-607 27-317 (362)
207 2owb_A Serine/threonine-protei 100.0 1.2E-37 4.1E-42 324.0 16.5 238 343-607 46-292 (335)
208 2vx3_A Dual specificity tyrosi 100.0 1.7E-37 5.8E-42 328.9 17.9 195 343-542 59-262 (382)
209 3lij_A Calcium/calmodulin depe 100.0 3E-37 1E-41 338.0 20.4 245 343-611 42-298 (494)
210 2j7t_A Serine/threonine-protei 100.0 2.7E-37 9.1E-42 316.3 18.2 241 343-606 24-275 (302)
211 3fme_A Dual specificity mitoge 100.0 1.7E-37 5.7E-42 315.7 16.4 244 343-606 12-266 (290)
212 3fhr_A MAP kinase-activated pr 100.0 1.5E-37 5E-42 323.4 16.2 245 343-607 34-288 (336)
213 2r3i_A Cell division protein k 100.0 3.5E-37 1.2E-41 314.9 18.8 250 343-606 8-283 (299)
214 3gbz_A Kinase, CMGC CDK; ssgci 100.0 8.3E-38 2.8E-42 324.4 14.2 248 343-606 39-318 (329)
215 2w5a_A Serine/threonine-protei 100.0 9.8E-38 3.4E-42 315.7 14.1 249 343-610 11-271 (279)
216 2xrw_A Mitogen-activated prote 100.0 5.2E-37 1.8E-41 323.8 20.1 247 343-607 30-319 (371)
217 2rio_A Serine/threonine-protei 100.0 1.3E-37 4.4E-42 335.1 15.6 245 343-606 20-295 (434)
218 1phk_A Phosphorylase kinase; g 100.0 6.3E-37 2.1E-41 312.9 19.7 242 343-606 22-283 (298)
219 2fst_X Mitogen-activated prote 100.0 3.9E-37 1.3E-41 323.8 18.6 251 343-607 34-312 (367)
220 2pml_X PFPK7, Ser/Thr protein 100.0 2.4E-37 8.4E-42 323.3 16.9 252 343-607 36-323 (348)
221 2y4i_B KSR2, HKSR2, kinase sup 100.0 8.6E-38 2.9E-42 322.5 13.2 247 343-616 38-305 (319)
222 4e7w_A Glycogen synthase kinas 100.0 2.7E-37 9.3E-42 328.4 17.2 258 343-613 45-330 (394)
223 2j0j_A Focal adhesion kinase 1 100.0 3.6E-37 1.2E-41 347.2 19.0 246 343-614 395-652 (656)
224 3e3p_A Protein kinase, putativ 100.0 9.3E-37 3.2E-41 320.4 20.4 263 343-613 28-323 (360)
225 2vwi_A Serine/threonine-protei 100.0 5.4E-38 1.8E-42 321.4 10.6 253 343-607 20-288 (303)
226 2eu9_A Dual specificity protei 100.0 2.6E-37 9E-42 323.5 16.0 253 343-606 24-333 (355)
227 3qyz_A Mitogen-activated prote 100.0 2.4E-37 8.3E-42 325.5 15.7 251 343-607 32-314 (364)
228 3an0_A Dual specificity mitoge 100.0 2.3E-37 7.9E-42 322.5 15.2 245 343-607 56-311 (340)
229 3eb0_A Putative uncharacterize 100.0 3.3E-37 1.1E-41 326.7 16.6 258 343-613 12-330 (383)
230 1blx_A Cyclin-dependent kinase 100.0 4.5E-37 1.5E-41 318.2 16.6 252 343-607 16-297 (326)
231 1j1b_A Glycogen synthase kinas 100.0 4.3E-37 1.5E-41 329.6 16.9 259 343-612 59-344 (420)
232 4exu_A Mitogen-activated prote 100.0 2.3E-36 7.8E-41 318.9 21.8 252 343-612 47-331 (371)
233 3cek_A Dual specificity protei 100.0 2.6E-36 8.8E-41 310.8 21.6 241 343-608 33-294 (313)
234 3coi_A Mitogen-activated prote 100.0 7.8E-37 2.7E-41 320.2 17.1 252 343-612 29-313 (353)
235 2wtk_C Serine/threonine-protei 100.0 3.2E-36 1.1E-40 308.7 20.6 239 343-607 10-264 (305)
236 2b9h_A MAP kinase FUS3, mitoge 100.0 1.5E-36 5.1E-41 317.9 18.1 256 343-612 16-313 (353)
237 1zy4_A Serine/threonine-protei 100.0 2.8E-36 9.4E-41 308.4 18.9 241 343-607 11-284 (303)
238 2wei_A Calmodulin-domain prote 100.0 3.3E-36 1.1E-40 306.0 19.1 241 343-607 27-277 (287)
239 3p23_A Serine/threonine-protei 100.0 1.2E-36 4E-41 326.9 16.0 239 343-606 29-283 (432)
240 3aln_A Dual specificity mitoge 100.0 1.7E-36 5.9E-41 314.1 16.3 248 343-606 27-285 (327)
241 2i6l_A Mitogen-activated prote 100.0 3.4E-36 1.2E-40 310.3 17.9 248 343-607 16-306 (320)
242 2dyl_A Dual specificity mitoge 100.0 1.4E-36 4.6E-41 313.3 14.4 241 343-606 30-283 (318)
243 3a99_A Proto-oncogene serine/t 100.0 9E-37 3.1E-41 315.3 13.1 233 343-607 48-294 (320)
244 2iwi_A Serine/threonine-protei 100.0 2E-36 6.8E-41 311.4 13.0 233 343-607 36-284 (312)
245 3uqc_A Probable conserved tran 100.0 5.4E-35 1.8E-39 296.8 20.5 229 343-617 36-269 (286)
246 3m2w_A MAP kinase-activated pr 100.0 2.3E-35 8E-40 301.6 17.5 227 343-607 23-257 (299)
247 2pzi_A Probable serine/threoni 100.0 1.7E-35 5.8E-40 336.5 17.2 233 343-612 85-327 (681)
248 3qa8_A MGC80376 protein; kinas 100.0 7.8E-36 2.7E-40 330.8 11.4 263 342-615 18-311 (676)
249 3dzo_A Rhoptry kinase domain; 100.0 1.2E-34 4.1E-39 309.8 14.4 236 343-606 83-363 (413)
250 2vuw_A Serine/threonine-protei 100.0 1.3E-33 4.5E-38 293.6 17.2 238 341-605 23-329 (336)
251 1ogq_A PGIP-2, polygalacturona 100.0 1.5E-28 5.1E-33 252.7 13.1 188 25-215 2-202 (313)
252 4azs_A Methyltransferase WBDD; 99.9 2.3E-29 7.9E-34 278.4 4.2 181 345-537 241-437 (569)
253 3rgz_A Protein brassinosteroid 99.9 3.6E-26 1.2E-30 263.5 11.6 189 23-215 6-228 (768)
254 3en9_A Glycoprotease, O-sialog 99.9 5.1E-26 1.7E-30 250.3 7.8 177 343-539 341-539 (540)
255 4eco_A Uncharacterized protein 99.9 6.4E-26 2.2E-30 255.7 6.7 185 27-216 28-336 (636)
256 4ecn_A Leucine-rich repeat pro 99.9 9.5E-26 3.3E-30 259.4 6.9 185 26-216 266-579 (876)
257 4fcg_A Uncharacterized protein 99.9 3E-23 1E-27 214.4 8.0 186 24-216 22-235 (328)
258 3rgz_A Protein brassinosteroid 99.9 5.3E-23 1.8E-27 237.0 9.8 160 70-230 515-750 (768)
259 1zar_A RIO2 kinase; serine kin 99.9 3E-22 1E-26 202.0 10.0 151 343-523 95-274 (282)
260 3m19_A Variable lymphocyte rec 99.8 1.2E-20 4.3E-25 187.1 15.3 145 70-215 36-184 (251)
261 3e6j_A Variable lymphocyte rec 99.8 7.3E-20 2.5E-24 178.9 14.3 149 49-200 12-173 (229)
262 1ogq_A PGIP-2, polygalacturona 99.8 4.9E-21 1.7E-25 196.6 6.2 141 69-210 125-268 (313)
263 2o6s_A Variable lymphocyte rec 99.8 3.2E-19 1.1E-23 171.6 14.5 146 57-203 7-165 (208)
264 2o6q_A Variable lymphocyte rec 99.8 4E-19 1.4E-23 178.2 14.2 145 70-215 38-186 (270)
265 2v70_A SLIT-2, SLIT homolog 2 99.8 1.8E-19 6.1E-24 174.9 11.2 136 74-213 16-156 (220)
266 2v9t_B SLIT homolog 2 protein 99.8 5.5E-19 1.9E-23 171.5 12.3 133 77-213 19-155 (220)
267 2v70_A SLIT-2, SLIT homolog 2 99.8 2.5E-18 8.5E-23 166.8 13.7 147 57-203 11-170 (220)
268 2v9t_B SLIT homolog 2 protein 99.8 3.6E-18 1.2E-22 165.7 14.8 143 57-200 11-166 (220)
269 3rfs_A Internalin B, repeat mo 99.8 5.2E-18 1.8E-22 170.3 15.9 150 69-221 63-219 (272)
270 1zth_A RIO1 serine protein kin 99.8 1.3E-18 4.4E-23 173.2 11.0 132 343-492 52-219 (258)
271 4fcg_A Uncharacterized protein 99.8 8.8E-19 3E-23 180.9 9.6 144 69-216 104-259 (328)
272 2o6q_A Variable lymphocyte rec 99.8 1.1E-17 3.8E-22 167.6 16.1 153 69-222 61-220 (270)
273 3e6j_A Variable lymphocyte rec 99.7 1.4E-17 4.9E-22 162.5 15.1 153 59-221 14-173 (229)
274 2xot_A Amphoterin-induced prot 99.7 1.7E-18 5.7E-23 181.4 8.7 166 57-223 18-205 (361)
275 1ozn_A Reticulon 4 receptor; N 99.7 9.9E-18 3.4E-22 169.4 12.6 146 69-215 56-206 (285)
276 2z66_A Variable lymphocyte rec 99.7 4.5E-18 1.5E-22 173.8 9.3 156 57-214 7-179 (306)
277 1w8a_A SLIT protein; signaling 99.7 3E-18 1E-22 162.6 7.2 127 73-203 12-143 (192)
278 1p9a_G Platelet glycoprotein I 99.7 3.5E-17 1.2E-21 165.8 14.4 143 69-215 31-177 (290)
279 1ozn_A Reticulon 4 receptor; N 99.7 2.5E-17 8.7E-22 166.4 13.1 147 69-216 32-183 (285)
280 2z81_A CD282 antigen, TOLL-lik 99.7 3.4E-18 1.2E-22 189.3 7.3 157 56-215 4-177 (549)
281 4g8a_A TOLL-like receptor 4; l 99.7 5.9E-18 2E-22 190.4 8.8 153 60-213 34-200 (635)
282 1w8a_A SLIT protein; signaling 99.7 2.9E-17 1E-21 155.7 12.2 126 57-182 8-144 (192)
283 3m19_A Variable lymphocyte rec 99.7 7E-17 2.4E-21 160.0 15.0 154 56-216 4-161 (251)
284 2z80_A TOLL-like receptor 2, v 99.7 5.5E-18 1.9E-22 176.9 7.3 164 49-216 23-204 (353)
285 3oja_B Anopheles plasmodium-re 99.7 1.5E-17 5.1E-22 186.0 10.7 171 46-217 9-202 (597)
286 2o6s_A Variable lymphocyte rec 99.7 1.8E-16 6.2E-21 152.2 16.5 152 61-221 4-162 (208)
287 2o6r_A Variable lymphocyte rec 99.7 6.3E-17 2.2E-21 151.2 12.3 131 57-203 7-141 (177)
288 3o6n_A APL1; leucine-rich repe 99.7 1.8E-17 6E-22 175.5 9.5 170 47-217 4-196 (390)
289 3rfs_A Internalin B, repeat mo 99.7 9.8E-17 3.4E-21 160.9 14.4 135 68-203 84-222 (272)
290 2z66_A Variable lymphocyte rec 99.7 2.9E-17 9.8E-22 167.8 10.5 145 69-215 78-228 (306)
291 3v47_A TOLL-like receptor 5B a 99.7 2.3E-17 7.7E-22 178.3 10.3 151 58-209 9-177 (455)
292 2id5_A Lingo-1, leucine rich r 99.7 4E-17 1.4E-21 177.5 12.2 157 58-215 12-181 (477)
293 4b8c_D Glucose-repressible alc 99.7 6.9E-18 2.3E-22 192.2 6.4 178 26-209 129-339 (727)
294 3zyi_A Leucine-rich repeat-con 99.7 4.6E-17 1.6E-21 175.8 12.5 157 58-215 55-247 (452)
295 1p9a_G Platelet glycoprotein I 99.7 5.8E-17 2E-21 164.1 11.8 149 69-222 55-210 (290)
296 4eco_A Uncharacterized protein 99.7 8.2E-18 2.8E-22 189.4 5.9 132 80-215 194-358 (636)
297 2z62_A TOLL-like receptor 4, v 99.7 1.2E-16 4.2E-21 160.6 13.1 152 70-222 53-239 (276)
298 2ft3_A Biglycan; proteoglycan, 99.7 9E-17 3.1E-21 166.1 12.1 157 57-217 33-203 (332)
299 2z62_A TOLL-like receptor 4, v 99.7 5E-17 1.7E-21 163.4 9.9 143 70-213 29-176 (276)
300 1xku_A Decorin; proteoglycan, 99.7 1.6E-16 5.3E-21 164.2 13.3 142 57-200 31-185 (330)
301 3v47_A TOLL-like receptor 5B a 99.7 5.6E-17 1.9E-21 175.1 10.4 129 94-222 275-410 (455)
302 3vq2_A TLR4, TOLL-like recepto 99.7 4.9E-17 1.7E-21 182.3 9.9 152 60-212 14-179 (606)
303 2ell_A Acidic leucine-rich nuc 99.7 6.1E-17 2.1E-21 149.9 8.5 132 69-204 24-164 (168)
304 3t6q_A CD180 antigen; protein- 99.7 7.4E-17 2.5E-21 180.9 10.4 154 59-213 14-180 (606)
305 3cvr_A Invasion plasmid antige 99.7 9E-17 3.1E-21 176.8 10.3 145 48-214 35-184 (571)
306 3vq2_A TLR4, TOLL-like recepto 99.7 7.2E-17 2.5E-21 180.9 9.7 144 70-215 377-526 (606)
307 3j0a_A TOLL-like receptor 5; m 99.7 1.1E-16 3.7E-21 186.3 11.3 136 90-225 422-565 (844)
308 2wfh_A SLIT homolog 2 protein 99.7 1.9E-16 6.6E-21 150.1 10.9 123 73-200 14-140 (193)
309 2xwt_C Thyrotropin receptor; s 99.7 6.5E-17 2.2E-21 158.9 6.8 141 69-213 31-182 (239)
310 1wwl_A Monocyte differentiatio 99.7 4.3E-17 1.5E-21 167.0 5.6 133 70-203 96-245 (312)
311 4ecn_A Leucine-rich repeat pro 99.7 4.6E-17 1.6E-21 187.3 6.3 144 69-216 448-625 (876)
312 3j0a_A TOLL-like receptor 5; m 99.7 1.6E-16 5.3E-21 185.0 10.9 149 58-209 15-171 (844)
313 3zyj_A Leucine-rich repeat-con 99.7 4.4E-16 1.5E-20 167.5 13.5 154 69-224 112-296 (440)
314 4ezg_A Putative uncharacterize 99.6 2.3E-16 7.9E-21 150.2 9.7 139 69-215 44-186 (197)
315 3oja_A Leucine-rich immune mol 99.6 6.3E-17 2.2E-21 176.1 5.5 147 69-222 99-252 (487)
316 3zyi_A Leucine-rich repeat-con 99.6 7.8E-16 2.7E-20 166.1 13.4 154 69-224 123-307 (452)
317 2je0_A Acidic leucine-rich nuc 99.6 1.2E-16 4E-21 144.9 5.8 123 69-194 17-148 (149)
318 4glp_A Monocyte differentiatio 99.6 1.4E-16 4.8E-21 163.0 6.6 147 69-217 117-282 (310)
319 3oja_A Leucine-rich immune mol 99.6 2E-16 6.8E-21 172.2 8.1 97 118-215 120-219 (487)
320 3t6q_A CD180 antigen; protein- 99.6 2.5E-16 8.7E-21 176.5 8.7 145 69-215 376-528 (606)
321 1xku_A Decorin; proteoglycan, 99.6 7.7E-16 2.6E-20 158.9 11.4 144 70-216 122-269 (330)
322 3a79_B TLR6, VLRB.59, TOLL-lik 99.6 8.6E-16 3E-20 170.6 12.1 150 68-222 352-512 (562)
323 1ziw_A TOLL-like receptor 3; i 99.6 4.9E-16 1.7E-20 176.6 10.3 148 58-206 5-165 (680)
324 1wwl_A Monocyte differentiatio 99.6 1.5E-16 5.1E-21 163.0 5.3 146 69-217 121-284 (312)
325 3zyj_A Leucine-rich repeat-con 99.6 1.2E-15 4.1E-20 164.0 12.6 156 58-215 44-236 (440)
326 3oja_B Anopheles plasmodium-re 99.6 8.6E-16 2.9E-20 171.8 11.7 109 69-178 75-185 (597)
327 4gyi_A RIO2 kinase; protein ki 99.6 9.4E-16 3.2E-20 158.7 11.0 133 343-492 100-265 (397)
328 2ft3_A Biglycan; proteoglycan, 99.6 9.1E-16 3.1E-20 158.5 10.8 143 70-216 124-270 (332)
329 2je0_A Acidic leucine-rich nuc 99.6 3.1E-16 1.1E-20 142.0 6.4 123 92-216 15-146 (149)
330 2ell_A Acidic leucine-rich nuc 99.6 8.7E-16 3E-20 142.1 9.5 123 92-216 22-153 (168)
331 2id5_A Lingo-1, leucine rich r 99.6 6.8E-16 2.3E-20 167.8 10.0 147 69-216 56-206 (477)
332 1xeu_A Internalin C; cellular 99.6 1.6E-15 5.3E-20 151.3 11.4 137 69-215 41-177 (263)
333 2xot_A Amphoterin-induced prot 99.6 2.8E-15 9.7E-20 156.7 13.8 147 60-215 14-168 (361)
334 2z7x_B TOLL-like receptor 1, v 99.6 9.2E-16 3.1E-20 168.6 10.4 141 69-214 324-472 (520)
335 2z63_A TOLL-like receptor 4, v 99.6 1E-15 3.5E-20 170.2 10.8 145 69-215 373-523 (570)
336 2wfh_A SLIT homolog 2 protein 99.6 1.9E-15 6.4E-20 143.2 10.9 120 57-178 10-140 (193)
337 4ezg_A Putative uncharacterize 99.6 7.5E-16 2.6E-20 146.6 8.0 128 69-200 66-195 (197)
338 4g8a_A TOLL-like receptor 4; l 99.6 1.4E-15 5E-20 170.9 11.2 156 69-224 420-584 (635)
339 2z81_A CD282 antigen, TOLL-lik 99.6 1.3E-15 4.6E-20 168.5 10.6 146 69-222 361-512 (549)
340 4glp_A Monocyte differentiatio 99.6 3.9E-16 1.3E-20 159.7 5.8 145 70-215 92-256 (310)
341 2xwt_C Thyrotropin receptor; s 99.6 1E-15 3.4E-20 150.4 7.7 144 69-216 55-211 (239)
342 2z63_A TOLL-like receptor 4, v 99.6 1.4E-15 4.7E-20 169.1 9.0 143 69-212 28-175 (570)
343 3a79_B TLR6, VLRB.59, TOLL-lik 99.6 2.5E-15 8.5E-20 166.8 10.8 125 91-216 350-479 (562)
344 1ziw_A TOLL-like receptor 3; i 99.6 4.7E-15 1.6E-19 168.5 12.9 152 72-224 457-626 (680)
345 3o6n_A APL1; leucine-rich repe 99.6 4.6E-15 1.6E-19 156.8 11.9 108 69-178 69-179 (390)
346 4ay9_X Follicle-stimulating ho 99.6 3.5E-15 1.2E-19 155.3 10.7 95 57-152 9-116 (350)
347 2z7x_B TOLL-like receptor 1, v 99.6 1.2E-15 4.1E-20 167.7 7.5 125 91-216 321-450 (520)
348 3o53_A Protein LRIM1, AGAP0063 99.6 1E-15 3.5E-20 157.1 4.9 143 69-215 58-219 (317)
349 1ds9_A Outer arm dynein; leuci 99.6 1.8E-17 6.2E-22 158.0 -8.2 143 70-217 19-181 (198)
350 1h6t_A Internalin B; cell adhe 99.6 8.5E-15 2.9E-19 148.3 11.0 136 69-215 68-205 (291)
351 4b8c_D Glucose-repressible alc 99.6 3.5E-16 1.2E-20 178.2 0.8 137 68-209 223-364 (727)
352 3o53_A Protein LRIM1, AGAP0063 99.6 6.8E-16 2.3E-20 158.4 2.7 138 70-214 100-241 (317)
353 1dce_A Protein (RAB geranylger 99.5 7.9E-15 2.7E-19 162.0 10.2 117 71-193 443-567 (567)
354 1h6t_A Internalin B; cell adhe 99.5 1.2E-14 4.3E-19 147.0 10.7 136 69-216 46-184 (291)
355 1h6u_A Internalin H; cell adhe 99.5 1.4E-14 4.9E-19 147.8 10.9 136 69-215 63-200 (308)
356 2z80_A TOLL-like receptor 2, v 99.5 1.8E-14 6E-19 150.2 11.4 149 60-216 26-180 (353)
357 1h6u_A Internalin H; cell adhe 99.5 1.3E-14 4.5E-19 148.2 10.0 137 68-215 84-222 (308)
358 1m9s_A Internalin B; cell inva 99.5 2.5E-14 8.5E-19 159.0 11.7 137 69-216 65-203 (605)
359 2o6r_A Variable lymphocyte rec 99.5 2.8E-14 9.5E-19 133.1 10.0 112 69-181 28-141 (177)
360 3cvr_A Invasion plasmid antige 99.5 3.1E-14 1E-18 156.6 11.9 118 69-204 80-197 (571)
361 3g39_A Variable lymphocyte rec 99.5 5.6E-14 1.9E-18 130.2 11.4 104 73-180 13-118 (170)
362 2r9u_A Variable lymphocyte rec 99.5 6.8E-14 2.3E-18 130.1 12.0 104 72-179 15-120 (174)
363 3g39_A Variable lymphocyte rec 99.5 5.3E-14 1.8E-18 130.3 10.9 104 96-202 11-118 (170)
364 1a9n_A U2A', U2A'; complex (nu 99.5 1.4E-14 4.8E-19 135.0 7.1 123 70-199 20-153 (176)
365 1jl5_A Outer protein YOPM; leu 99.5 5E-15 1.7E-19 159.6 4.1 135 69-215 11-158 (454)
366 2r9u_A Variable lymphocyte rec 99.5 1.1E-13 3.8E-18 128.6 11.2 101 97-200 15-119 (174)
367 1m9s_A Internalin B; cell inva 99.5 4.7E-14 1.6E-18 156.8 9.7 136 69-216 43-181 (605)
368 1o6v_A Internalin A; bacterial 99.5 7.2E-14 2.5E-18 151.3 10.6 138 69-215 221-358 (466)
369 1a9n_A U2A', U2A'; complex (nu 99.5 4.8E-14 1.7E-18 131.4 7.3 123 89-217 14-147 (176)
370 1jl5_A Outer protein YOPM; leu 99.5 2.4E-13 8.4E-18 146.3 13.6 132 70-216 112-243 (454)
371 1dce_A Protein (RAB geranylger 99.5 5.3E-14 1.8E-18 155.4 8.4 116 95-215 442-565 (567)
372 3bz5_A Internalin-J, INLJ; leu 99.5 1.3E-13 4.4E-18 148.6 10.5 124 69-203 148-281 (457)
373 3g06_A SSPH2 (leucine-rich rep 99.5 6.1E-14 2.1E-18 156.1 7.9 151 48-216 14-170 (622)
374 1xeu_A Internalin C; cellular 99.4 2.4E-13 8.2E-18 135.4 11.3 123 69-201 63-187 (263)
375 1o6v_A Internalin A; bacterial 99.4 2.4E-13 8.1E-18 147.2 10.7 138 69-215 199-336 (466)
376 3bz5_A Internalin-J, INLJ; leu 99.4 7.4E-13 2.5E-17 142.7 13.6 133 69-215 106-238 (457)
377 4fmz_A Internalin; leucine ric 99.4 2.7E-13 9.3E-18 140.7 9.7 139 69-215 177-316 (347)
378 2ifg_A High affinity nerve gro 99.4 2.6E-13 8.9E-18 140.9 8.9 106 57-178 8-117 (347)
379 2ast_B S-phase kinase-associat 99.4 5E-15 1.7E-19 153.1 -5.1 126 69-196 70-205 (336)
380 4fmz_A Internalin; leucine ric 99.4 4E-13 1.4E-17 139.4 7.8 138 69-215 155-292 (347)
381 2ast_B S-phase kinase-associat 99.4 9.3E-15 3.2E-19 151.0 -4.9 147 69-216 93-253 (336)
382 2ca6_A RAN GTPase-activating p 99.3 2.1E-14 7.2E-19 151.5 -4.3 148 69-216 60-250 (386)
383 3g06_A SSPH2 (leucine-rich rep 99.3 2.9E-12 1E-16 142.5 12.2 132 70-215 122-289 (622)
384 2ifg_A High affinity nerve gro 99.3 2.4E-12 8E-17 133.7 9.7 102 97-200 11-117 (347)
385 2ca6_A RAN GTPase-activating p 99.3 1E-13 3.5E-18 146.3 -3.5 148 69-216 32-222 (386)
386 3goz_A Leucine-rich repeat-con 99.3 1.5E-13 5.3E-18 143.6 -2.4 135 70-204 23-185 (362)
387 3tm0_A Aminoglycoside 3'-phosp 99.3 2.4E-11 8.1E-16 120.8 12.8 136 344-490 20-212 (263)
388 1ds9_A Outer arm dynein; leuci 99.3 3E-14 1E-18 135.6 -8.3 123 90-216 14-146 (198)
389 3goz_A Leucine-rich repeat-con 99.3 5E-13 1.7E-17 139.6 0.0 130 73-203 2-155 (362)
390 4ay9_X Follicle-stimulating ho 99.2 4E-11 1.4E-15 124.6 10.1 139 62-210 7-153 (350)
391 3rw6_A Nuclear RNA export fact 99.1 2E-13 6.8E-18 134.7 -9.4 159 58-219 79-260 (267)
392 1z7x_W Ribonuclease inhibitor; 99.1 7E-13 2.4E-17 143.1 -7.5 147 69-215 227-403 (461)
393 1nd4_A Aminoglycoside 3'-phosp 99.1 3.3E-10 1.1E-14 112.0 12.1 130 346-490 27-213 (264)
394 1z7x_W Ribonuclease inhibitor; 99.1 5.2E-13 1.8E-17 144.2 -9.2 137 69-206 199-361 (461)
395 3dxp_A Putative acyl-COA dehyd 99.0 1.6E-09 5.5E-14 112.7 12.3 140 344-491 44-248 (359)
396 3un9_A NLR family member X1; l 98.9 3.2E-11 1.1E-15 126.0 -6.3 129 70-199 73-224 (372)
397 3sg8_A APH(2'')-ID; antibiotic 98.9 1E-09 3.5E-14 111.5 4.9 183 344-538 26-287 (304)
398 3sb4_A Hypothetical leucine ri 98.9 4.3E-09 1.5E-13 108.1 9.4 142 69-215 101-302 (329)
399 3un9_A NLR family member X1; l 98.8 1.1E-11 3.8E-16 129.5 -11.5 138 69-206 101-259 (372)
400 3sb4_A Hypothetical leucine ri 98.8 3.9E-09 1.3E-13 108.4 6.4 129 84-215 83-279 (329)
401 3ogk_B Coronatine-insensitive 98.6 6.6E-10 2.2E-14 123.8 -5.4 60 140-199 463-526 (592)
402 1io0_A Tropomodulin; LRR prote 98.5 2.5E-09 8.7E-14 100.0 -4.7 111 89-199 31-164 (185)
403 3rw6_A Nuclear RNA export fact 98.5 4.4E-08 1.5E-12 96.4 3.6 101 90-192 137-257 (267)
404 4gkh_A Aminoglycoside 3'-phosp 98.5 8.4E-07 2.9E-11 88.0 12.4 135 346-491 32-223 (272)
405 3r70_A Aminoglycoside phosphot 98.5 5.7E-07 2E-11 91.7 11.4 132 344-491 43-237 (320)
406 3ogk_B Coronatine-insensitive 98.5 1.3E-08 4.3E-13 113.3 -1.9 143 70-215 165-347 (592)
407 2p1m_B Transport inhibitor res 98.3 1.4E-08 4.8E-13 112.9 -5.8 121 92-215 103-240 (594)
408 3tdw_A Gentamicin resistance p 98.3 4E-06 1.4E-10 84.9 12.9 136 344-491 25-224 (306)
409 3ats_A Putative uncharacterize 98.3 1.7E-06 5.9E-11 89.5 9.9 80 344-423 26-122 (357)
410 3d1u_A Putative fructosamine-3 98.3 4E-06 1.4E-10 83.9 12.1 74 344-421 21-97 (288)
411 2p1m_B Transport inhibitor res 98.3 2.4E-08 8.1E-13 111.1 -5.0 107 92-200 370-495 (594)
412 3ovc_A Hygromycin-B 4-O-kinase 98.2 6.3E-06 2.1E-10 85.5 11.6 74 344-422 47-122 (362)
413 1io0_A Tropomodulin; LRR prote 98.2 6.4E-08 2.2E-12 90.4 -3.6 108 69-177 36-164 (185)
414 2ra8_A Uncharacterized protein 98.2 4.6E-07 1.6E-11 93.8 2.0 38 90-130 168-205 (362)
415 4fdw_A Leucine rich hypothetic 98.1 8.6E-06 3E-10 85.6 10.5 136 70-213 136-274 (401)
416 2ra8_A Uncharacterized protein 98.1 2.5E-07 8.6E-12 95.8 -1.9 127 69-200 172-321 (362)
417 4fdw_A Leucine rich hypothetic 98.1 6.6E-06 2.3E-10 86.5 8.8 122 70-199 158-284 (401)
418 3jr1_A Putative fructosamine-3 97.9 6.7E-05 2.3E-09 75.8 12.5 140 344-487 42-232 (312)
419 2q83_A YTAA protein; 2635576, 97.9 4.2E-05 1.5E-09 78.3 10.9 143 344-490 38-251 (346)
420 2olc_A MTR kinase, methylthior 97.9 6.8E-05 2.3E-09 78.7 12.5 74 344-419 36-120 (397)
421 3f7w_A Putative fructosamine-3 97.7 0.00034 1.1E-08 69.8 12.8 74 344-421 21-97 (288)
422 3rfe_A Platelet glycoprotein I 97.5 0.00011 3.7E-09 63.9 6.2 57 121-177 11-68 (130)
423 2pyw_A Uncharacterized protein 97.5 0.00042 1.5E-08 73.2 11.7 73 461-534 232-312 (420)
424 1zyl_A Hypothetical protein YI 97.5 0.00087 3E-08 68.0 13.2 144 345-491 33-223 (328)
425 3dxq_A Choline/ethanolamine ki 97.5 0.00062 2.1E-08 68.3 11.4 71 344-421 24-95 (301)
426 3e4g_A ATP synthase subunit S, 97.3 4.3E-05 1.5E-09 69.7 1.0 81 94-174 61-149 (176)
427 2ppq_A HSK, HK, homoserine kin 97.2 0.002 7E-08 65.0 12.6 145 344-490 28-216 (322)
428 3feg_A Choline/ethanolamine ki 97.2 0.0011 3.7E-08 68.7 10.5 142 345-490 57-253 (379)
429 1nw1_A Choline kinase (49.2 KD 97.2 0.00079 2.7E-08 71.2 8.6 73 344-421 79-159 (429)
430 2qg7_A Ethanolamine kinase PV0 97.2 0.0017 5.9E-08 69.0 11.2 74 344-421 114-188 (458)
431 3csv_A Aminoglycoside phosphot 97.1 0.001 3.5E-08 67.7 9.0 143 345-491 25-217 (333)
432 1pgv_A TMD-1, tropomodulin TMD 96.9 6.5E-05 2.2E-09 69.8 -2.0 110 89-198 36-169 (197)
433 3c5i_A Choline kinase; choline 96.9 0.0019 6.4E-08 66.8 8.8 74 344-421 39-121 (369)
434 3e4g_A ATP synthase subunit S, 96.8 0.00044 1.5E-08 62.9 2.3 80 118-197 61-150 (176)
435 3i1a_A Spectinomycin phosphotr 96.7 0.008 2.8E-07 61.3 11.0 69 347-421 32-108 (339)
436 1pgv_A TMD-1, tropomodulin TMD 96.4 0.00021 7.3E-09 66.3 -2.4 108 69-177 41-170 (197)
437 4fs7_A Uncharacterized protein 96.4 0.0088 3E-07 62.3 9.6 56 70-128 231-286 (394)
438 3rfe_A Platelet glycoprotein I 96.3 0.0053 1.8E-07 53.0 6.1 56 73-131 12-68 (130)
439 2yle_A Protein spire homolog 1 96.2 0.032 1.1E-06 52.1 10.9 102 420-537 34-135 (229)
440 3mes_A Choline kinase; malaria 96.2 0.0065 2.2E-07 63.8 7.0 74 344-421 76-157 (424)
441 4gt6_A Cell surface protein; l 96.2 0.0078 2.7E-07 62.7 7.4 110 84-199 255-370 (394)
442 4gt6_A Cell surface protein; l 96.1 0.011 3.9E-07 61.5 8.1 100 111-215 258-362 (394)
443 3f2s_A CK, chetk-alpha, cholin 95.9 0.018 6.2E-07 59.8 8.7 142 345-490 59-279 (401)
444 4h09_A Hypothetical leucine ri 95.8 0.022 7.6E-07 58.8 9.0 123 88-215 211-338 (379)
445 4fs7_A Uncharacterized protein 95.7 0.038 1.3E-06 57.4 10.0 16 113-128 248-263 (394)
446 4h09_A Hypothetical leucine ri 95.3 0.071 2.4E-06 54.9 10.4 82 89-173 235-319 (379)
447 2ks1_B Epidermal growth factor 92.9 0.051 1.7E-06 36.4 2.1 30 258-287 11-40 (44)
448 2l2t_A Receptor tyrosine-prote 92.6 0.046 1.6E-06 36.5 1.5 32 257-288 9-40 (44)
449 2k1k_A Ephrin type-A receptor 92.5 0.035 1.2E-06 36.0 0.8 31 254-284 7-37 (38)
450 3g15_A CK, chetk-alpha, cholin 92.1 0.45 1.5E-05 49.4 9.4 29 463-491 246-280 (401)
451 2jwa_A Receptor tyrosine-prote 88.7 0.15 5.3E-06 33.9 1.3 29 258-287 12-40 (44)
452 4ann_A ESSB; membrane protein, 79.3 3.3 0.00011 38.4 6.3 116 392-539 43-158 (215)
453 4ano_A ESSB; membrane protein, 77.6 4.8 0.00016 37.5 6.9 115 392-539 48-163 (219)
454 2k9y_A Ephrin type-A receptor 74.6 1.2 4.2E-05 29.2 1.5 7 263-269 18-24 (41)
455 3cxl_A N-chimerin; SH2, RHO-GA 63.8 0.81 2.8E-05 48.4 -2.0 58 344-405 148-215 (463)
456 1iij_A ERBB-2 receptor protein 46.4 2.4 8.2E-05 26.6 -1.1 23 261-284 11-33 (35)
457 2klu_A T-cell surface glycopro 46.3 13 0.00044 26.8 2.5 17 263-279 12-29 (70)
458 2l34_A TYRO protein tyrosine k 42.0 7 0.00024 24.2 0.5 25 257-281 6-30 (33)
459 2lz0_A Uncharacterized protein 40.3 48 0.0016 26.3 5.5 48 79-128 6-53 (100)
460 3ls8_A Phosphatidylinositol 3- 38.1 1.1E+02 0.0039 32.9 9.5 47 437-490 453-501 (614)
461 2llm_A Amyloid beta A4 protein 34.7 12 0.00041 24.5 0.0 26 256-281 15-40 (43)
462 1zza_A Stannin, AG8_1; helix, 22.5 84 0.0029 23.0 3.5 20 269-288 23-42 (90)
No 1
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=3e-52 Score=429.49 Aligned_cols=252 Identities=24% Similarity=0.407 Sum_probs=202.1
Q ss_pred hccccccCceEEEEEEec------CCCeEEEEEeecccC-ChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEe
Q 006677 343 AEVLGKGSYGTAYKAVLE------ESTTVVVKRLKEVVV-GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDY 415 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~------~~~~vavK~l~~~~~-~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~ 415 (635)
.+.||+|+||+||+|++. +++.||||+++.... ..++|.+|+++++++ +|||||+++|+|.+.+..++||||
T Consensus 46 ~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l-~HpnIV~l~g~~~~~~~~~lV~Ey 124 (329)
T 4aoj_A 46 KWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTML-QHQHIVRFFGVCTEGRPLLMVFEY 124 (329)
T ss_dssp EEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECSSSSEEEEEEC
T ss_pred EEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEEECCEEEEEEEc
Confidence 567999999999999864 367899999976532 356799999999999 999999999999999999999999
Q ss_pred ccCCChhhhccCCCCC----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEee
Q 006677 416 FASGSLSTLLHGNRGA----------GRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISD 485 (635)
Q Consensus 416 ~~~g~L~~~l~~~~~~----------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~D 485 (635)
|++|+|.++++..... ...+++|.+++.|+.|||.||+|||+++ ||||||||+|||+++++.+||+|
T Consensus 125 ~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDLKp~NILl~~~~~~Ki~D 201 (329)
T 4aoj_A 125 MRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH---FVHRDLATRNCLVGQGLVVKIGD 201 (329)
T ss_dssp CTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEETTTEEEECC
T ss_pred CCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCC---eecccccHhhEEECCCCcEEEcc
Confidence 9999999999765321 2346999999999999999999999988 99999999999999999999999
Q ss_pred cCCCCCCCCC------CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhh
Q 006677 486 FGLTPLMNVP------ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVR 558 (635)
Q Consensus 486 fGla~~~~~~------~~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~ 558 (635)
||+|+..... ....+|+.|||||++.+..|+.++|||||||++|||+| |+.||...... .....+..
T Consensus 202 FGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~------~~~~~i~~ 275 (329)
T 4aoj_A 202 FGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT------EAIDCITQ 275 (329)
T ss_dssp CC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHH------HHHHHHHH
T ss_pred cccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHH------HHHHHHHc
Confidence 9999865432 23457889999999999999999999999999999999 89999864322 11222221
Q ss_pred hccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhccC
Q 006677 559 EEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 615 (635)
Q Consensus 559 ~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~~~~ 615 (635)
.. .. +.+......+.+++.+||+.||++||||+||+++|+.+.+..
T Consensus 276 g~-~~----------~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~p 321 (329)
T 4aoj_A 276 GR-EL----------ERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAP 321 (329)
T ss_dssp TC-CC----------CCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHSC
T ss_pred CC-CC----------CCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhCC
Confidence 11 10 111123345778888999999999999999999999998754
No 2
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=2.8e-52 Score=425.68 Aligned_cols=249 Identities=24% Similarity=0.366 Sum_probs=203.9
Q ss_pred hccccccCceEEEEEEec------CCCeEEEEEeecccC--ChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEE
Q 006677 343 AEVLGKGSYGTAYKAVLE------ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYD 414 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~------~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e 414 (635)
.+.||+|+||+||+|.+. +++.||||+++.... ..++|.+|+.++.++ +|||||+++|+|.+++..++|||
T Consensus 31 ~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l-~HpNIV~l~g~~~~~~~~~lV~E 109 (308)
T 4gt4_A 31 MEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARL-QHPNVVCLLGVVTKDQPLSMIFS 109 (308)
T ss_dssp EEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhC-CCCCCCCcceEEEECCEEEEEEE
Confidence 467999999999999863 467899999976533 357899999999999 99999999999999999999999
Q ss_pred eccCCChhhhccCCCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEE
Q 006677 415 YFASGSLSTLLHGNRGA-----------GRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCI 483 (635)
Q Consensus 415 ~~~~g~L~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki 483 (635)
||++|+|.++|+..... ....++|..++.|+.|||.||+|||+++ ||||||||+|||+++++.+||
T Consensus 110 y~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDLK~~NILl~~~~~~Ki 186 (308)
T 4gt4_A 110 YCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKI 186 (308)
T ss_dssp CCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEE
T ss_pred cCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC---CCCCCccccceEECCCCCEEE
Confidence 99999999999654211 1245899999999999999999999998 999999999999999999999
Q ss_pred eecCCCCCCCCC------CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHH
Q 006677 484 SDFGLTPLMNVP------ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSV 556 (635)
Q Consensus 484 ~DfGla~~~~~~------~~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~ 556 (635)
+|||+|+..... ....+|+.|||||++.++.|+.++|||||||++|||+| |..||.+.+.. .....+
T Consensus 187 ~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~------~~~~~i 260 (308)
T 4gt4_A 187 SDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ------DVVEMI 260 (308)
T ss_dssp CCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHH------HHHHHH
T ss_pred CCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHH------HHHHHH
Confidence 999999765322 23457889999999999999999999999999999999 89999865422 122222
Q ss_pred hhhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhh
Q 006677 557 VREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVR 612 (635)
Q Consensus 557 ~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~ 612 (635)
. .+... +.++.+...+.+++.+||+.||++||||+||+++|+.+.
T Consensus 261 ~-~~~~~----------~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~~ 305 (308)
T 4gt4_A 261 R-NRQVL----------PCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWG 305 (308)
T ss_dssp H-TTCCC----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred H-cCCCC----------CCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhcc
Confidence 2 21111 111233456778889999999999999999999998653
No 3
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=8.6e-52 Score=420.38 Aligned_cols=251 Identities=28% Similarity=0.433 Sum_probs=199.4
Q ss_pred hhccccccCceEEEEEEecCCCeEEEEEeecccCC---hHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEeccC
Q 006677 342 SAEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS 418 (635)
Q Consensus 342 ~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~ 418 (635)
..+.||+|+||+||+|+++ ..||||+++..... .+.|.+|+++++++ +|||||++++++. ++..++|||||++
T Consensus 40 l~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l-~HpNIV~l~g~~~-~~~~~iVmEy~~g 115 (307)
T 3omv_A 40 LSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKT-RHVNILLFMGYMT-KDNLAIVTQWCEG 115 (307)
T ss_dssp EEEECCCCSSSEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEC-SSSCEEEEECCSS
T ss_pred EeeEEeeCCCcEEEEEEEC--CcEEEEEEEecCCCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEE-CCeEEEEEEcCCC
Confidence 3578999999999999875 36999998755433 35789999999999 9999999999875 4578999999999
Q ss_pred CChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCC---
Q 006677 419 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP--- 495 (635)
Q Consensus 419 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~--- 495 (635)
|+|.++++... ..++|..+..|+.|||.||+|||+++ ||||||||+|||+++++.+||+|||+|+.....
T Consensus 116 GsL~~~l~~~~----~~l~~~~~~~i~~qia~gL~yLH~~~---IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~ 188 (307)
T 3omv_A 116 SSLYKHLHVQE----TKFQMFQLIDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS 188 (307)
T ss_dssp CBHHHHHHTSC----CCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCCSSSEEEETTEEEEECCCSSCBC-------
T ss_pred CCHHHHHhhcC----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCccCHHHEEECCCCcEEEeeccCceecccCCcc
Confidence 99999997543 34999999999999999999999988 999999999999999999999999999875432
Q ss_pred ---CCCCCCCcccCcccccC---CCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhh
Q 006677 496 ---ATPSRSAGYRAPEVIET---RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVE 569 (635)
Q Consensus 496 ---~~~~~~~~y~aPE~~~~---~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 569 (635)
....||+.|||||++.+ ..|+.++|||||||++|||+||+.||.+.+.. ..+...+...... +.
T Consensus 189 ~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~------~~~~~~~~~~~~~----p~ 258 (307)
T 3omv_A 189 QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNR------DQIIFMVGRGYAS----PD 258 (307)
T ss_dssp -----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCH------HHHHHHHHTTCCC----CC
T ss_pred eeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChH------HHHHHHHhcCCCC----CC
Confidence 23468999999999964 45899999999999999999999999754321 1222222222111 11
Q ss_pred hhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhccC
Q 006677 570 LMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 615 (635)
Q Consensus 570 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~~~~ 615 (635)
... ........+.+++.+||+.||++||||.||+++|+.++..-
T Consensus 259 ~~~--~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~l 302 (307)
T 3omv_A 259 LSK--LYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302 (307)
T ss_dssp STT--SCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred ccc--ccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccC
Confidence 000 11223346778888999999999999999999999987654
No 4
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=1.2e-52 Score=426.57 Aligned_cols=252 Identities=24% Similarity=0.435 Sum_probs=204.3
Q ss_pred hccccccCceEEEEEEec------CCCeEEEEEeecccC-ChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEe
Q 006677 343 AEVLGKGSYGTAYKAVLE------ESTTVVVKRLKEVVV-GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDY 415 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~------~~~~vavK~l~~~~~-~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~ 415 (635)
.+.||+|+||+||+|++. ++..||||+++.... ..++|.+|+++++++ +|||||+++|+|.+++..++||||
T Consensus 18 ~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l-~HpnIV~l~g~~~~~~~~~lV~Ey 96 (299)
T 4asz_A 18 KRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNL-QHEHIVKFYGVCVEGDPLIMVFEY 96 (299)
T ss_dssp EEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECSSSSEEEEEEC
T ss_pred eeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhC-CCCCCccEEEEEeeCCEEEEEEEc
Confidence 578999999999999864 367899999976532 356799999999999 999999999999999999999999
Q ss_pred ccCCChhhhccCCC--------CCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecC
Q 006677 416 FASGSLSTLLHGNR--------GAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFG 487 (635)
Q Consensus 416 ~~~g~L~~~l~~~~--------~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfG 487 (635)
|++|+|.++++... ......++|..++.|+.|||.||+|||+++ ||||||||+|||+++++.+||+|||
T Consensus 97 ~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDlKp~NILl~~~~~~Ki~DFG 173 (299)
T 4asz_A 97 MKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQH---FVHRDLATRNCLVGENLLVKIGDFG 173 (299)
T ss_dssp CTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCS
T ss_pred CCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCccCHhhEEECCCCcEEECCcc
Confidence 99999999997542 122346999999999999999999999998 9999999999999999999999999
Q ss_pred CCCCCCCCC------CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhc
Q 006677 488 LTPLMNVPA------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREE 560 (635)
Q Consensus 488 la~~~~~~~------~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 560 (635)
+|+...... ...+|+.|||||++.+..|+.++|||||||++|||+| |+.||.+.+.. .....+....
T Consensus 174 la~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~------~~~~~i~~~~ 247 (299)
T 4asz_A 174 MSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN------EVIECITQGR 247 (299)
T ss_dssp CHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH------HHHHHHHHTC
T ss_pred cceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH------HHHHHHHcCC
Confidence 997543321 2247889999999999999999999999999999999 89999865422 1222222211
Q ss_pred cccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhccC
Q 006677 561 WTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 615 (635)
Q Consensus 561 ~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~~~~ 615 (635)
.. +.+.....++.+++.+||+.||++|||++||++.|+++....
T Consensus 248 ~~-----------~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~~ 291 (299)
T 4asz_A 248 VL-----------QRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKAS 291 (299)
T ss_dssp CC-----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHS
T ss_pred CC-----------CCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhcC
Confidence 11 111223346778888999999999999999999999987654
No 5
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.3e-51 Score=421.64 Aligned_cols=261 Identities=22% Similarity=0.302 Sum_probs=196.8
Q ss_pred hccccccCceEEEEEEecCCCeEEEEEeecccCChHHHHHHHHHHHhhcCCCceeceeEEEEeCC----eeEEEEEeccC
Q 006677 343 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKD----EKLLVYDYFAS 418 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~----~~~lv~e~~~~ 418 (635)
.+.||+|+||+||+|++. |+.||||++.........++.|+..+.++ +|||||+++++|..++ ..++|||||++
T Consensus 8 ~~~iG~G~fG~Vy~~~~~-g~~VAvK~l~~~~~~~~~~e~Ei~~~~~l-~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~~~ 85 (303)
T 3hmm_A 8 QESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVML-RHENILGFIAADNKDNGTWTQLWLVSDYHEH 85 (303)
T ss_dssp EEEEEECSSSEEEEEEET-TEEEEEEEECGGGHHHHHHHHHHHTSTTC-CCTTBCCEEEEEEEECSSSEEEEEEEECCTT
T ss_pred EEEEeeCCCeEEEEEEEC-CEEEEEEEECccchhhHHHHHHHHHHhcC-CCCCCCcEEEEEEecCCCceEEEEEecCCCC
Confidence 568999999999999985 88999999975432222233444445566 8999999999998764 57999999999
Q ss_pred CChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC-----CCCceecCCCCCCeEEcCCCCeEEeecCCCCCCC
Q 006677 419 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMG-----GPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN 493 (635)
Q Consensus 419 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~-----~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~ 493 (635)
|+|.++++.. .++|..+.+++.|++.||+|||+++ .++||||||||+|||++.++.+||+|||+|+...
T Consensus 86 gsL~~~l~~~------~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~ 159 (303)
T 3hmm_A 86 GSLFDYLNRY------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD 159 (303)
T ss_dssp CBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEE
T ss_pred CcHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCcccc
Confidence 9999999742 3999999999999999999999861 3459999999999999999999999999997653
Q ss_pred CCC--------CCCCCCcccCcccccCC------CCCCccchhhHHHHHHHHHhCCCCCCCCCCCCC--------CChhH
Q 006677 494 VPA--------TPSRSAGYRAPEVIETR------KHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDM--------VDLPR 551 (635)
Q Consensus 494 ~~~--------~~~~~~~y~aPE~~~~~------~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~--------~~~~~ 551 (635)
... ...||+.|||||++.+. .++.++|||||||++|||+||..||......+. .....
T Consensus 160 ~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~ 239 (303)
T 3hmm_A 160 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVE 239 (303)
T ss_dssp TTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHH
T ss_pred CCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHH
Confidence 321 23589999999999764 367899999999999999999888764332211 01111
Q ss_pred HHHHHhhhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhccC
Q 006677 552 WVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 615 (635)
Q Consensus 552 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~~~~ 615 (635)
.....+.+.. .++.+.......+....+.+++.+||+.||++||||.||++.|+++.+..
T Consensus 240 ~~~~~~~~~~----~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~~ 299 (303)
T 3hmm_A 240 EMRKVVCEQK----LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp HHHHHHTTSC----CCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred HHHHHHhccc----CCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHHc
Confidence 2222221111 11111111122355677889999999999999999999999999998653
No 6
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=1.3e-50 Score=416.89 Aligned_cols=240 Identities=20% Similarity=0.344 Sum_probs=199.2
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccC-ChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEeccCCC
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV-GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGS 420 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 420 (635)
.+.||+|+||+||+|... +|+.||||++..... ..+.+.+|+++++++ +|||||++++++.+++..|+|||||++|+
T Consensus 79 ~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l-~HpnIV~l~~~~~~~~~~~ivmEy~~gg~ 157 (346)
T 4fih_A 79 FIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDY-QHENVVEMYNSYLVGDELWVVMEFLEGGA 157 (346)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEECCCTTEE
T ss_pred eEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhC-CCCCCCcEEEEEEECCEEEEEEeCCCCCc
Confidence 357999999999999975 588999999975533 456789999999999 99999999999999999999999999999
Q ss_pred hhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCC----C
Q 006677 421 LSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP----A 496 (635)
Q Consensus 421 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~----~ 496 (635)
|.+++... .+++..+..++.||+.||+|||+++ ||||||||+|||++.++.+||+|||+|+..... .
T Consensus 158 L~~~l~~~------~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~ 228 (346)
T 4fih_A 158 LTDIVTHT------RMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK 228 (346)
T ss_dssp HHHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBC
T ss_pred HHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEECCCCCEEEecCcCceecCCCCCccc
Confidence 99999742 3999999999999999999999998 999999999999999999999999999866432 3
Q ss_pred CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcccCh
Q 006677 497 TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNI 576 (635)
Q Consensus 497 ~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 576 (635)
+..||+.|||||++.+..|+.++|||||||++|||++|+.||.+.+.. .....+. ...... . ...
T Consensus 229 ~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~------~~~~~i~-~~~~~~-----~---~~~ 293 (346)
T 4fih_A 229 SLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL------KAMKMIR-DNLPPR-----L---KNL 293 (346)
T ss_dssp CCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH------HHHHHHH-HSSCCC-----C---SCG
T ss_pred ccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH------HHHHHHH-cCCCCC-----C---Ccc
Confidence 457999999999999999999999999999999999999999754321 1122221 111100 1 111
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006677 577 EEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 577 ~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 607 (635)
......+.+++.+||+.||++|||++|++++
T Consensus 294 ~~~s~~~~dli~~~L~~dP~~R~ta~e~l~H 324 (346)
T 4fih_A 294 HKVSPSLKGFLDRLLVRDPAQRATAAELLKH 324 (346)
T ss_dssp GGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred ccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 1222356677789999999999999999874
No 7
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=3.1e-50 Score=412.85 Aligned_cols=246 Identities=21% Similarity=0.242 Sum_probs=201.1
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccCChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEeccCCCh
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSL 421 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 421 (635)
.++||+|+||+||+|+.. +|+.||||+++.... ..+|+.+++++ +|||||++++++.+++..|+|||||++|+|
T Consensus 63 ~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~----~~~E~~il~~l-~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L 137 (336)
T 4g3f_A 63 QPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF----RVEELVACAGL-SSPRIVPLYGAVREGPWVNIFMELLEGGSL 137 (336)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC----CTHHHHTTTTC-CCTTBCCEEEEEEETTEEEEEECCCTTCBH
T ss_pred CcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh----HHHHHHHHHhC-CCCCCCcEEEEEEECCEEEEEEeccCCCcH
Confidence 467999999999999975 478999999976432 24689999999 999999999999999999999999999999
Q ss_pred hhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCC-CeEEeecCCCCCCCCC-----
Q 006677 422 STLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDL-DGCISDFGLTPLMNVP----- 495 (635)
Q Consensus 422 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~-~~ki~DfGla~~~~~~----- 495 (635)
.++++.. ..+++..+..++.||+.||+|||+++ ||||||||+|||++.++ .+||+|||+|+.....
T Consensus 138 ~~~l~~~-----~~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~ 209 (336)
T 4g3f_A 138 GQLIKQM-----GCLPEDRALYYLGQALEGLEYLHTRR---ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKS 209 (336)
T ss_dssp HHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCCGGGEEECTTSCCEEECCCTTCEEC--------
T ss_pred HHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcccc
Confidence 9999743 34999999999999999999999998 99999999999999998 6999999999865432
Q ss_pred ----CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhh
Q 006677 496 ----ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELM 571 (635)
Q Consensus 496 ----~~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 571 (635)
....||+.|||||++.+..|+.++|||||||++|||+||+.||.+.+..+.. ..+........ .
T Consensus 210 ~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~------~~i~~~~~~~~------~ 277 (336)
T 4g3f_A 210 LLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLC------LKIASEPPPIR------E 277 (336)
T ss_dssp ----CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCH------HHHHHSCCGGG------G
T ss_pred eecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHH------HHHHcCCCCch------h
Confidence 1235899999999999999999999999999999999999999876544321 12222111100 0
Q ss_pred cccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhccCC
Q 006677 572 RFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDS 616 (635)
Q Consensus 572 ~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~~~~~ 616 (635)
..+ .....+.+++.+||+.||++|||+.|++++|..+.+...
T Consensus 278 ~~~---~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~ 319 (336)
T 4g3f_A 278 IPP---SCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVG 319 (336)
T ss_dssp SCT---TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTT
T ss_pred cCc---cCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhh
Confidence 111 223356677789999999999999999999988775543
No 8
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=1.8e-50 Score=419.66 Aligned_cols=257 Identities=26% Similarity=0.370 Sum_probs=206.9
Q ss_pred hhccccccCceEEEEEEecC------CCeEEEEEeecccC--ChHHHHHHHHHHHhhcCCCceeceeEEEEeC-CeeEEE
Q 006677 342 SAEVLGKGSYGTAYKAVLEE------STTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSK-DEKLLV 412 (635)
Q Consensus 342 ~~~~lG~G~fg~Vy~~~~~~------~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~-~~~~lv 412 (635)
..+.||+|+||+||+|.+.. ++.||||+++.... ..+.|.+|++++.++.+|||||+++|+|..+ +..++|
T Consensus 68 l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~~~~iV 147 (353)
T 4ase_A 68 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVI 147 (353)
T ss_dssp EEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEE
T ss_pred EeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCCEEEEE
Confidence 36789999999999998653 25799999976533 2457899999999996679999999999765 568999
Q ss_pred EEeccCCChhhhccCCCC-----------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCe
Q 006677 413 YDYFASGSLSTLLHGNRG-----------AGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDG 481 (635)
Q Consensus 413 ~e~~~~g~L~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ 481 (635)
||||++|+|.++|+..+. .....+++..++.++.|||.||+|||+++ ||||||||+|||+++++.+
T Consensus 148 ~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~---iiHRDLK~~NILl~~~~~v 224 (353)
T 4ase_A 148 VEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVV 224 (353)
T ss_dssp EECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCE
T ss_pred EEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCC---eecCccCccceeeCCCCCE
Confidence 999999999999975432 12345899999999999999999999998 9999999999999999999
Q ss_pred EEeecCCCCCCCCCC------CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHH
Q 006677 482 CISDFGLTPLMNVPA------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQ 554 (635)
Q Consensus 482 ki~DfGla~~~~~~~------~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~ 554 (635)
||+|||+|+...... ...+|+.|||||++.+..|+.++|||||||++|||+| |+.||.+....+ .+.
T Consensus 225 Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~------~~~ 298 (353)
T 4ase_A 225 KICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE------EFC 298 (353)
T ss_dssp EECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH------HHH
T ss_pred EECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHH------HHH
Confidence 999999998764432 2236788999999999999999999999999999998 899998654221 222
Q ss_pred HHhhhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhccCCC
Q 006677 555 SVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSE 617 (635)
Q Consensus 555 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~~~~~~ 617 (635)
..+.++..... ++....++.+++.+||+.||++|||++|++++|+.+.+....
T Consensus 299 ~~i~~g~~~~~----------p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~~~~ 351 (353)
T 4ase_A 299 RRLKEGTRMRA----------PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQ 351 (353)
T ss_dssp HHHHHTCCCCC----------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTC-
T ss_pred HHHHcCCCCCC----------CccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHHhhC
Confidence 23322221111 112234567888899999999999999999999999876543
No 9
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=1.7e-49 Score=400.62 Aligned_cols=241 Identities=24% Similarity=0.386 Sum_probs=192.8
Q ss_pred ccccccCceEEEEEEec-CCCeEEEEEeecccCC---hHHHHHHHHHHHhhcCCCceeceeEEEEe----CCeeEEEEEe
Q 006677 344 EVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYS----KDEKLLVYDY 415 (635)
Q Consensus 344 ~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~----~~~~~lv~e~ 415 (635)
+.||+|+||+||+|... ++..||+|++...... .+.|.+|+++++++ +|||||+++++|.+ ++..|+||||
T Consensus 32 ~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l-~HpnIV~~~~~~~~~~~~~~~~~lvmEy 110 (290)
T 3fpq_A 32 IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGL-QHPNIVRFYDSWESTVKGKKCIVLVTEL 110 (290)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEEEEETTEEEEEEEEEC
T ss_pred eEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEeeccCCCcEEEEEEeC
Confidence 56999999999999975 4788999999765443 35688999999999 99999999999875 3457999999
Q ss_pred ccCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcC-CCCeEEeecCCCCCCCC
Q 006677 416 FASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQ-DLDGCISDFGLTPLMNV 494 (635)
Q Consensus 416 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~-~~~~ki~DfGla~~~~~ 494 (635)
|++|+|.++++.. ..+++..+..++.||+.||+|||+++ ++||||||||+|||++. ++.+||+|||+|+....
T Consensus 111 ~~gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~ylH~~~-~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~ 184 (290)
T 3fpq_A 111 MTSGTLKTYLKRF-----KVMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA 184 (290)
T ss_dssp CCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred CCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC-CCEEecccChhheeEECCCCCEEEEeCcCCEeCCC
Confidence 9999999999743 34899999999999999999999985 56999999999999984 79999999999986543
Q ss_pred C--CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhc
Q 006677 495 P--ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMR 572 (635)
Q Consensus 495 ~--~~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 572 (635)
. .+..||+.|||||++.+ .|+.++|||||||++|||+||+.||.+.. ........ +........++.
T Consensus 185 ~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~-----~~~~~~~~-i~~~~~~~~~~~---- 253 (290)
T 3fpq_A 185 SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQ-----NAAQIYRR-VTSGVKPASFDK---- 253 (290)
T ss_dssp TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCS-----SHHHHHHH-HTTTCCCGGGGG----
T ss_pred CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCC-----cHHHHHHH-HHcCCCCCCCCc----
Confidence 3 24569999999999875 69999999999999999999999997432 11112222 222111111111
Q ss_pred ccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006677 573 FQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 573 ~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 607 (635)
. ...++.+++.+||+.||++|||++|++++
T Consensus 254 --~---~~~~~~~li~~~L~~dP~~R~s~~e~l~H 283 (290)
T 3fpq_A 254 --V---AIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp --C---CCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred --c---CCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 1 11246678889999999999999999874
No 10
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=9.7e-50 Score=411.00 Aligned_cols=241 Identities=18% Similarity=0.374 Sum_probs=195.5
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccCC---hHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEeccC
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS 418 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~ 418 (635)
.+.||+|+||+||+|+.. +++.||||++...... .+.+.+|+++++++ +|||||++++++.+++..|+|||||++
T Consensus 29 ~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l-~HpnIV~~~~~~~~~~~~yiVmEy~~g 107 (350)
T 4b9d_A 29 LQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANM-KHPNIVQYRESFEENGSLYIVMDYCEG 107 (350)
T ss_dssp EEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred eEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHC-CCCCCCcEEEEEEECCEEEEEEeCCCC
Confidence 468999999999999975 5889999999765443 35688999999999 999999999999999999999999999
Q ss_pred CChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCCC--
Q 006677 419 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA-- 496 (635)
Q Consensus 419 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~~-- 496 (635)
|+|.+++...+ ...+++..++.++.||+.||+|||+++ ||||||||+||||+.++.+||+|||+|+......
T Consensus 108 g~L~~~i~~~~---~~~~~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~ 181 (350)
T 4b9d_A 108 GDLFKRINAQK---GVLFQEDQILDWFVQICLALKHVHDRK---ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVEL 181 (350)
T ss_dssp CBHHHHHHHTT---TCCCCHHHHHHHHHHHHHHHHHHHHTT---CEETTCCGGGEEECTTCCEEECSTTEESCCCHHHHH
T ss_pred CcHHHHHHHcC---CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCHHHEEECCCCCEEEcccccceeecCCccc
Confidence 99999997543 234789999999999999999999998 9999999999999999999999999998775432
Q ss_pred --CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhccc
Q 006677 497 --TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQ 574 (635)
Q Consensus 497 --~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 574 (635)
+..||+.|||||++.+..|+.++|||||||++|||+||+.||.+.+ .......+....... ...
T Consensus 182 ~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~------~~~~~~~i~~~~~~~--------~~~ 247 (350)
T 4b9d_A 182 ARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGS------MKNLVLKIISGSFPP--------VSL 247 (350)
T ss_dssp HHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS------HHHHHHHHHHTCCCC--------CCT
T ss_pred ccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC------HHHHHHHHHcCCCCC--------CCc
Confidence 2358999999999999999999999999999999999999997543 223333333332211 011
Q ss_pred ChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006677 575 NIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 575 ~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 607 (635)
. ...++.+++.+||+.||++|||++|++++
T Consensus 248 ~---~s~~~~~li~~~L~~dP~~R~s~~e~l~h 277 (350)
T 4b9d_A 248 H---YSYDLRSLVSQLFKRNPRDRPSVNSILEK 277 (350)
T ss_dssp T---SCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred c---CCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 1 22356677889999999999999999873
No 11
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=2.1e-49 Score=417.79 Aligned_cols=240 Identities=20% Similarity=0.346 Sum_probs=199.0
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccC-ChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEeccCCC
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV-GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGS 420 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 420 (635)
.+.||+|+||.||+|... +|+.||||++..... ..+.+.+|+++++++ +|||||+++++|.+++..|+|||||++|+
T Consensus 156 ~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l-~HpnIV~l~~~~~~~~~~~iVmEy~~gG~ 234 (423)
T 4fie_A 156 FIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDY-QHENVVEMYNSYLVGDELWVVMEFLEGGA 234 (423)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEEECCTTEE
T ss_pred eeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhC-CCCCCCceEEEEEECCEEEEEEeCCCCCc
Confidence 467999999999999975 588999999976533 456789999999999 99999999999999999999999999999
Q ss_pred hhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCC----C
Q 006677 421 LSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP----A 496 (635)
Q Consensus 421 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~----~ 496 (635)
|.++++.. .+++..+..++.||+.||+|||+++ ||||||||+||||+.++.+||+|||+|+..... .
T Consensus 235 L~~~i~~~------~l~e~~~~~~~~qil~aL~ylH~~~---IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~ 305 (423)
T 4fie_A 235 LTDIVTHT------RMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK 305 (423)
T ss_dssp HHHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCCBC
T ss_pred HHHHHhcc------CCCHHHHHHHHHHHHHHHHHHHHCC---eecccCCHHHEEEcCCCCEEEecCccceECCCCCcccc
Confidence 99999642 3899999999999999999999998 999999999999999999999999999866432 2
Q ss_pred CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcccCh
Q 006677 497 TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNI 576 (635)
Q Consensus 497 ~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 576 (635)
+.+||+.|||||++.+..|+.++|||||||++|||++|+.||.+.+. ......+. ..... .+.....+
T Consensus 306 ~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~------~~~~~~i~-~~~~~-----~~~~~~~~ 373 (423)
T 4fie_A 306 SLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP------LKAMKMIR-DNLPP-----RLKNLHKV 373 (423)
T ss_dssp CCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH------HHHHHHHH-HSCCC-----CCSCTTSS
T ss_pred ccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH------HHHHHHHH-cCCCC-----CCcccccC
Confidence 45689999999999999999999999999999999999999975432 11122221 11110 11111122
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006677 577 EEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 577 ~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 607 (635)
+ ..+.+++.+||+.||++|||++|++++
T Consensus 374 s---~~~~dli~~~L~~dP~~R~ta~ell~H 401 (423)
T 4fie_A 374 S---PSLKGFLDRLLVRDPAQRATAAELLKH 401 (423)
T ss_dssp C---HHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred C---HHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 2 345677789999999999999999884
No 12
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=4e-49 Score=399.74 Aligned_cols=238 Identities=18% Similarity=0.307 Sum_probs=198.8
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeeccc----CChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEecc
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVV----VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 417 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 417 (635)
.+.||+|+||+||+|+.. +++.||||++.+.. ...+.+.+|+++++++ +|||||++++++.+++..|+||||++
T Consensus 37 ~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~yivmEy~~ 115 (311)
T 4aw0_A 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLYFTFQDDEKLYFGLSYAK 115 (311)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred EEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEeCCEEEEEEecCC
Confidence 578999999999999965 58899999997542 2356789999999999 99999999999999999999999999
Q ss_pred CCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCC--
Q 006677 418 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP-- 495 (635)
Q Consensus 418 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~-- 495 (635)
+|+|.+++... ..+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+|+.....
T Consensus 116 gG~L~~~i~~~-----~~l~e~~~~~~~~qi~~al~ylH~~~---IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~ 187 (311)
T 4aw0_A 116 NGELLKYIRKI-----GSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK 187 (311)
T ss_dssp TEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEECCTTTT
T ss_pred CCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCC
Confidence 99999999743 34999999999999999999999998 999999999999999999999999999876422
Q ss_pred ----CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhh
Q 006677 496 ----ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELM 571 (635)
Q Consensus 496 ----~~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 571 (635)
.+.+||+.|||||++.+..|+.++||||+||++|||+||+.||.+.+. ......+...... +
T Consensus 188 ~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~------~~~~~~i~~~~~~---~----- 253 (311)
T 4aw0_A 188 QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE------GLIFAKIIKLEYD---F----- 253 (311)
T ss_dssp CCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHTCCC---C-----
T ss_pred cccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHcCCCC---C-----
Confidence 245699999999999999999999999999999999999999975432 2223333332211 0
Q ss_pred cccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006677 572 RFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 572 ~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 607 (635)
....+ .++.+++.+|++.||++|||++|++.+
T Consensus 254 -p~~~s---~~~~dli~~lL~~dp~~R~t~~e~~~~ 285 (311)
T 4aw0_A 254 -PEKFF---PKARDLVEKLLVLDATKRLGCEEMEGY 285 (311)
T ss_dssp -CTTCC---HHHHHHHHHHSCSSGGGSTTSGGGTCH
T ss_pred -CcccC---HHHHHHHHHHccCCHhHCcChHHHcCC
Confidence 11122 345677789999999999999997543
No 13
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=2e-48 Score=389.24 Aligned_cols=237 Identities=23% Similarity=0.367 Sum_probs=185.4
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccC----ChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEecc
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV----GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 417 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~----~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 417 (635)
.+.||+|+||+||+|... +++.||+|++.+... ..+.+.+|+++++++ +|||||++++++.+++..|+||||+
T Consensus 18 ~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~~~~~~~~~~~~~ivmEy~- 95 (275)
T 3hyh_A 18 VKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLL-RHPHIIKLYDVIKSKDEIIMVIEYA- 95 (275)
T ss_dssp EEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEEECC-
T ss_pred EEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHC-CCCCCCeEEEEEEECCEEEEEEeCC-
Confidence 468999999999999964 588999999976532 245789999999999 9999999999999999999999999
Q ss_pred CCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCC--
Q 006677 418 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP-- 495 (635)
Q Consensus 418 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~-- 495 (635)
+|+|.+++... ..+++..+..++.||+.||+|||+++ |+||||||+|||+++++.+||+|||+|+.....
T Consensus 96 ~g~L~~~l~~~-----~~l~e~~~~~~~~qi~~al~ylH~~~---IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~ 167 (275)
T 3hyh_A 96 GNELFDYIVQR-----DKMSEQEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF 167 (275)
T ss_dssp CEEHHHHHHHS-----CSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCTTTEEECTTCCEEECCSSCC--------
T ss_pred CCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCChHHeEECCCCCEEEeecCCCeecCCCCc
Confidence 67999998743 34999999999999999999999998 999999999999999999999999999876543
Q ss_pred -CCCCCCCcccCcccccCCCC-CCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcc
Q 006677 496 -ATPSRSAGYRAPEVIETRKH-SHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRF 573 (635)
Q Consensus 496 -~~~~~~~~y~aPE~~~~~~~-~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 573 (635)
.+..||+.|||||++.+..| +.++||||+||++|||+||+.||.+.+ .....+.+...... + .
T Consensus 168 ~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~------~~~~~~~i~~~~~~---~------p 232 (275)
T 3hyh_A 168 LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES------IPVLFKNISNGVYT---L------P 232 (275)
T ss_dssp -------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHTCCC---C------C
T ss_pred cCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCC------HHHHHHHHHcCCCC---C------C
Confidence 24568999999999998886 579999999999999999999997543 22222332222111 0 1
Q ss_pred cChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006677 574 QNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 574 ~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 607 (635)
... ...+.+++.+|++.||++|||++|++++
T Consensus 233 ~~~---s~~~~~li~~~L~~dP~~R~s~~eil~h 263 (275)
T 3hyh_A 233 KFL---SPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp TTS---CHHHHHHHHHHSCSSGGGSCCHHHHHHC
T ss_pred CCC---CHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 112 2345677789999999999999999883
No 14
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=1.3e-48 Score=395.96 Aligned_cols=237 Identities=26% Similarity=0.389 Sum_probs=188.8
Q ss_pred hccccccCceEEEEEEec----CCCeEEEEEeecccC---ChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEe
Q 006677 343 AEVLGKGSYGTAYKAVLE----ESTTVVVKRLKEVVV---GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDY 415 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~----~~~~vavK~l~~~~~---~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~ 415 (635)
.+.||+|+||+||+|+.. .++.||+|+++.... ....+.+|++++.++ +|||||++++++.+++..|+||||
T Consensus 29 ~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~~ivmEy 107 (304)
T 3ubd_A 29 LKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV-NHPFIVKLHYAFQTEGKLYLILDF 107 (304)
T ss_dssp EEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCC-CCTTEECEEEEEEETTEEEEEECC
T ss_pred EEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHC-CCCCCCeEEEEEEECCEEEEEEEc
Confidence 578999999999999863 367899999975432 234688899999999 999999999999999999999999
Q ss_pred ccCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCC-
Q 006677 416 FASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV- 494 (635)
Q Consensus 416 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~- 494 (635)
+++|+|.+++... ..+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+|+....
T Consensus 108 ~~gg~L~~~l~~~-----~~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 179 (304)
T 3ubd_A 108 LRGGDLFTRLSKE-----VMFTEEDVKFYLAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDH 179 (304)
T ss_dssp CTTCEEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECTTSCEEEESSEEEEC----
T ss_pred CCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHeEEcCCCCEEecccccceeccCC
Confidence 9999999999743 24999999999999999999999998 99999999999999999999999999986532
Q ss_pred ---CCCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhh
Q 006677 495 ---PATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELM 571 (635)
Q Consensus 495 ---~~~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 571 (635)
..+..||+.|||||++.+..|+.++||||+||++|||+||+.||.+.+. ......+......
T Consensus 180 ~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~------~~~~~~i~~~~~~--------- 244 (304)
T 3ubd_A 180 EKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDR------KETMTMILKAKLG--------- 244 (304)
T ss_dssp -CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHCCCC---------
T ss_pred CccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCH------HHHHHHHHcCCCC---------
Confidence 2345689999999999999999999999999999999999999986432 2222333222111
Q ss_pred cccChHHHHHHHHHHHHHcccCCCCCCCCH-----HHHHH
Q 006677 572 RFQNIEEEMVQMLQIGMACVAKVPDMRPNM-----DEVVR 606 (635)
Q Consensus 572 ~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~-----~evl~ 606 (635)
..... ..++.+++.+||+.||++|||+ +|+++
T Consensus 245 ~p~~~---s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~ 281 (304)
T 3ubd_A 245 MPQFL---SPEAQSLLRMLFKRNPANRLGAGPDGVEEIKR 281 (304)
T ss_dssp CCTTS---CHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHT
T ss_pred CCCcC---CHHHHHHHHHHcccCHHHCCCCCcCCHHHHHc
Confidence 01112 2345677789999999999995 56654
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=4.4e-47 Score=386.27 Aligned_cols=240 Identities=21% Similarity=0.360 Sum_probs=182.8
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccC--ChHHHHHHHHHHHhhcCCCceeceeEEEEeCC------------
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKD------------ 407 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~------------ 407 (635)
.+.||+|+||+||+|+.. +++.||||+++.... ..+.+.+|+++++++ +|||||++++++.+.+
T Consensus 10 ~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l-~HpnIV~~~~~~~~~~~~~~~~~~~~~~ 88 (299)
T 4g31_A 10 IQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKL-EHPGIVRYFNAWLEKNTTEKLQPSSPKV 88 (299)
T ss_dssp EEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEEEC----------CE
T ss_pred eeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEecCccccccccCCCc
Confidence 468999999999999975 588999999975432 245688999999999 9999999999987654
Q ss_pred eeEEEEEeccCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecC
Q 006677 408 EKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFG 487 (635)
Q Consensus 408 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfG 487 (635)
..|+||||+++|+|.+++.... .....++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||
T Consensus 89 ~l~ivmE~~~gg~L~~~l~~~~--~~~~~~~~~~~~i~~qi~~al~ylH~~~---IiHRDlKp~NILl~~~~~vKl~DFG 163 (299)
T 4g31_A 89 YLYIQMQLCRKENLKDWMNGRC--TIEERERSVCLHIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFG 163 (299)
T ss_dssp EEEEEEECCCSCCHHHHHHTCC--SGGGSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECCCC
T ss_pred EEEEEEecCCCCcHHHHHHhcC--CCChhHHHHHHHHHHHHHHHHHHHHHCc---CccccCcHHHeEECCCCcEEEccCc
Confidence 3689999999999999997543 1234667788999999999999999998 9999999999999999999999999
Q ss_pred CCCCCCCCC----------------CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhH
Q 006677 488 LTPLMNVPA----------------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPR 551 (635)
Q Consensus 488 la~~~~~~~----------------~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~ 551 (635)
+|+...... +..||+.|||||++.+..|+.++|||||||++|||++ ||.... +...
T Consensus 164 la~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~-----~~~~ 235 (299)
T 4g31_A 164 LVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQM-----ERVR 235 (299)
T ss_dssp CC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHH-----HHHH
T ss_pred cceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCcc-----HHHH
Confidence 998764321 2358999999999999999999999999999999996 775311 0001
Q ss_pred HHHHHhhhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006677 552 WVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 552 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 607 (635)
......... + .+..........+++.+||+.||++|||+.|++++
T Consensus 236 ~~~~~~~~~-----~------p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 280 (299)
T 4g31_A 236 TLTDVRNLK-----F------PPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIEN 280 (299)
T ss_dssp HHHHHHTTC-----C------CHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHHHhcCC-----C------CCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 111111100 0 01112233345678889999999999999999873
No 16
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.8e-44 Score=377.70 Aligned_cols=249 Identities=21% Similarity=0.303 Sum_probs=191.7
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccCC---hHHHHHHHHHHHhhcCCCceeceeEEEEeC------CeeEEE
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSK------DEKLLV 412 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~------~~~~lv 412 (635)
.+.||+|+||+||+|... +|+.||||+++..... .+.+.+|+++++++ +|||||++++++... +..|+|
T Consensus 59 ~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~~~~~~~iv 137 (398)
T 4b99_A 59 IETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHF-KHDNIIAIKDILRPTVPYGEFKSVYVV 137 (398)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHC-CCTTBCCEEEECCCSSCTTTCCCEEEE
T ss_pred EEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhc-CCCCcceEeeeeecccccccCCEEEEE
Confidence 468999999999999975 5889999999765433 34678899999999 999999999997643 578999
Q ss_pred EEeccCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCC
Q 006677 413 YDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM 492 (635)
Q Consensus 413 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~ 492 (635)
||||+ |+|.+++... ..+++..+..++.||+.||+|||+++ ||||||||+|||++.++.+||+|||+|+..
T Consensus 138 mE~~~-g~L~~~i~~~-----~~l~~~~~~~~~~qil~al~ylH~~~---iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~ 208 (398)
T 4b99_A 138 LDLME-SDLHQIIHSS-----QPLTLEHVRYFLYQLLRGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGL 208 (398)
T ss_dssp EECCS-EEHHHHHTSS-----SCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTCCEEECCCTTCBCC
T ss_pred EeCCC-CCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCc---CcCCCcCccccccCCCCCEEEeecceeeec
Confidence 99996 6899999743 35999999999999999999999998 999999999999999999999999999865
Q ss_pred CC--------CCCCCCCCcccCcccccCC-CCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccc-
Q 006677 493 NV--------PATPSRSAGYRAPEVIETR-KHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWT- 562 (635)
Q Consensus 493 ~~--------~~~~~~~~~y~aPE~~~~~-~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~- 562 (635)
.. ..+..||+.|||||++.+. .++.++||||+||++|||++|+.||.+.+..+ ....+......
T Consensus 209 ~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~------~l~~I~~~~g~p 282 (398)
T 4b99_A 209 CTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVH------QLQLIMMVLGTP 282 (398)
T ss_dssp -------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHH------HHHHHHHHHCCC
T ss_pred ccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHH------HHHHHHHhcCCC
Confidence 32 1245689999999998775 46899999999999999999999998654222 11111111000
Q ss_pred -cccc--------h---hhhhc-cc-Ch----HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006677 563 -AEVF--------D---VELMR-FQ-NI----EEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 563 -~~~~--------d---~~~~~-~~-~~----~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 607 (635)
.... . ..+.. .+ .. .....++.+|+.+||+.||++|||++|++++
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 345 (398)
T 4b99_A 283 SPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH 345 (398)
T ss_dssp CGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred ChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 0000 0 00000 00 00 0112356778889999999999999999984
No 17
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=1.5e-44 Score=377.64 Aligned_cols=187 Identities=23% Similarity=0.459 Sum_probs=163.8
Q ss_pred hccccccCceEEEEEEec----CCCeEEEEEeecccCChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEeccC
Q 006677 343 AEVLGKGSYGTAYKAVLE----ESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS 418 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~----~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~ 418 (635)
.+.||+|+||+||+|+.+ .++.||+|++... .....+.+|++++..+.+|||||++++++.+++..|+||||+++
T Consensus 26 ~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~-~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvmE~~~g 104 (361)
T 4f9c_A 26 EDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPT-SHPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEH 104 (361)
T ss_dssp EEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTT-SCHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEEECCCC
T ss_pred EEEEecccCcEEEEEEEcccCCCCCEEEEEEEccc-cCHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEEeCCCc
Confidence 468999999999999853 3578999998654 34567889999999997899999999999999999999999999
Q ss_pred CChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCC-CCeEEeecCCCCCCCCC--
Q 006677 419 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQD-LDGCISDFGLTPLMNVP-- 495 (635)
Q Consensus 419 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~-~~~ki~DfGla~~~~~~-- 495 (635)
|+|.++++ .+++.++..++.|++.||+|||+++ |+||||||+|||++.+ +.+||+|||+|+.....
T Consensus 105 ~~L~~~~~--------~l~~~~~~~~~~qll~al~ylH~~g---IiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~ 173 (361)
T 4f9c_A 105 ESFLDILN--------SLSFQEVREYMLNLFKALKRIHQFG---IVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKI 173 (361)
T ss_dssp CCHHHHHT--------TCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSC
T ss_pred ccHHHHHc--------CCCHHHHHHHHHHHHHHHHHHHHCC---eEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCccc
Confidence 99999984 2899999999999999999999998 9999999999999877 79999999999654321
Q ss_pred ------------------------------CCCCCCCcccCcccccCC-CCCCccchhhHHHHHHHHHhCCCCCCCC
Q 006677 496 ------------------------------ATPSRSAGYRAPEVIETR-KHSHKSDVYSFGVLLLEMLTGKAPLQSP 541 (635)
Q Consensus 496 ------------------------------~~~~~~~~y~aPE~~~~~-~~~~k~Dvws~Gvvl~el~tg~~p~~~~ 541 (635)
.+..||+.|+|||++.+. .|+.++||||+||++|||+||+.||...
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~ 250 (361)
T 4f9c_A 174 ELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKA 250 (361)
T ss_dssp GGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCC
T ss_pred cccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCC
Confidence 123589999999999775 4899999999999999999999999644
No 18
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=6.7e-43 Score=361.41 Aligned_cols=267 Identities=27% Similarity=0.520 Sum_probs=225.0
Q ss_pred hccccccCceEEEEEEecCCCeEEEEEeecccC-ChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEeccCCCh
Q 006677 343 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVV-GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSL 421 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~-~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 421 (635)
.+.||+|+||+||+|...+++.||+|++..... ..+.+.+|++++.++ +||||+++++++...+..++||||+++|+|
T Consensus 44 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 122 (321)
T 2qkw_B 44 KFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC-RHPHLVSLIGFCDERNEMILIYKYMENGNL 122 (321)
T ss_dssp CCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSC-CCTTBCCEEEECCCTTCCEEEEECCTTCBT
T ss_pred cceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhC-CCCCEeeEEEEEcCCCeEEEEEEcCCCCcH
Confidence 357999999999999988899999999876543 356788999999999 899999999999999999999999999999
Q ss_pred hhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCCC-----
Q 006677 422 STLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA----- 496 (635)
Q Consensus 422 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~~----- 496 (635)
.+++..... ....+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 123 ~~~l~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 198 (321)
T 2qkw_B 123 KRHLYGSDL-PTMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLS 198 (321)
T ss_dssp GGGSSSSCC-CSCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCSTTEEECTTCCEEECCCTTCEECSSSSCCCCB
T ss_pred HHHHhccCC-CccccCHHHHHHHHHHHHHHHHHhcCCC---eecCCCCHHHEEECCCCCEEEeecccccccccccccccc
Confidence 999975432 2345899999999999999999999998 9999999999999999999999999987543221
Q ss_pred -CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcccC
Q 006677 497 -TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQN 575 (635)
Q Consensus 497 -~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 575 (635)
...+++.|+|||++.+..++.++||||||+++|||++|+.||......+......|..............+..... ..
T Consensus 199 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 277 (321)
T 2qkw_B 199 TVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLAD-KI 277 (321)
T ss_dssp CCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSCTT-CS
T ss_pred cccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcChhhcc-cc
Confidence 2236788999999998899999999999999999999999999877777777777766555444444444443321 22
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhccC
Q 006677 576 IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 615 (635)
Q Consensus 576 ~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~~~~ 615 (635)
..+....+.+++.+||+.||++|||+.|++++|+.+....
T Consensus 278 ~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~~ 317 (321)
T 2qkw_B 278 RPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQ 317 (321)
T ss_dssp CHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred CHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhcc
Confidence 3567788999999999999999999999999999987643
No 19
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=2.3e-43 Score=387.95 Aligned_cols=241 Identities=18% Similarity=0.250 Sum_probs=191.0
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeeccc----CChHHHHHHHHH---HHhhcCCCceeceeEEEEeCCeeEEEEE
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVV----VGKRDFEQQMEI---VGRVGQHPNVVPLRAYYYSKDEKLLVYD 414 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~----~~~~~~~~e~~~---l~~l~~h~niv~l~~~~~~~~~~~lv~e 414 (635)
.++||+|+||+||+|+.. +|+.||+|++.+.. .......+|..+ +..+ +|||||++++++.+.+..|+|||
T Consensus 194 ~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~-~HP~IV~l~~~f~~~~~lylVmE 272 (689)
T 3v5w_A 194 HRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG-DCPFIVCMSYAFHTPDKLSFILD 272 (689)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSS-CCTTBCCEEEEEECSSEEEEEEC
T ss_pred EEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhC-CCCCEeEEEEEEEECCEEEEEEe
Confidence 468999999999999975 58899999997542 223334444433 3444 89999999999999999999999
Q ss_pred eccCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCC
Q 006677 415 YFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV 494 (635)
Q Consensus 415 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~ 494 (635)
|++||+|.+++... ..+++..+..++.||+.||+|||+++ ||||||||+||||+.+|.+||+|||+|+....
T Consensus 273 y~~GGdL~~~l~~~-----~~l~E~~a~~y~~qIl~aL~yLH~~g---IiHRDLKPeNILld~~G~vKL~DFGlA~~~~~ 344 (689)
T 3v5w_A 273 LMNGGDLHYHLSQH-----GVFSEADMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSK 344 (689)
T ss_dssp CCCSCBHHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred cCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchHHeEEeCCCCEEecccceeeecCC
Confidence 99999999999743 24999999999999999999999998 99999999999999999999999999987654
Q ss_pred C--CCCCCCCcccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhh
Q 006677 495 P--ATPSRSAGYRAPEVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELM 571 (635)
Q Consensus 495 ~--~~~~~~~~y~aPE~~~~-~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 571 (635)
. .+.+||+.|||||++.. ..|+.++||||+||++|||++|+.||.+....+ .......+......
T Consensus 345 ~~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~---~~~i~~~i~~~~~~--------- 412 (689)
T 3v5w_A 345 KKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD---KHEIDRMTLTMAVE--------- 412 (689)
T ss_dssp CCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCC---HHHHHHHHHHCCCC---------
T ss_pred CCCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH---HHHHHHhhcCCCCC---------
Confidence 3 35679999999999964 579999999999999999999999997644332 11112222211110
Q ss_pred cccChHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHHH
Q 006677 572 RFQNIEEEMVQMLQIGMACVAKVPDMRPN-----MDEVVRM 607 (635)
Q Consensus 572 ~~~~~~~~~~~l~~l~~~cl~~~P~~RPs-----~~evl~~ 607 (635)
....++ .++.+++.+|++.||++|++ ++||++|
T Consensus 413 ~p~~~S---~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~H 450 (689)
T 3v5w_A 413 LPDSFS---PELRSLLEGLLQRDVNRRLGCLGRGAQEVKES 450 (689)
T ss_dssp CCTTSC---HHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTS
T ss_pred CCccCC---HHHHHHHHHHccCCHhHCCCCCCCCHHHHhcC
Confidence 111122 34567777999999999998 6888763
No 20
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=3.1e-43 Score=389.50 Aligned_cols=243 Identities=20% Similarity=0.397 Sum_probs=199.5
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccC-ChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEeccCCC
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV-GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGS 420 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 420 (635)
.+.||+|+||+||+|... +|+.||+|++..... ..+.+.+|+++|+.+ +|||||++++++.+++..|+|||||++|+
T Consensus 162 ~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~~~~iv~E~~~gg~ 240 (573)
T 3uto_A 162 HEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVL-RHPTLVNLHDAFEDDNEMVMIYEFMSGGE 240 (573)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHT-CCTTBCCEEEEEECSSEEEEEEECCCCCB
T ss_pred EEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhC-CCCCCCeEEEEEEECCEEEEEEeecCCCc
Confidence 568999999999999975 588999999976533 356788999999999 99999999999999999999999999999
Q ss_pred hhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCC--CCeEEeecCCCCCCCCCC--
Q 006677 421 LSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQD--LDGCISDFGLTPLMNVPA-- 496 (635)
Q Consensus 421 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~--~~~ki~DfGla~~~~~~~-- 496 (635)
|.+++.... ..+++..+..++.||+.||+|||+++ |+||||||+|||++.+ +.+||+|||+|+......
T Consensus 241 L~~~i~~~~----~~l~e~~~~~~~~qi~~al~ylH~~~---iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~~ 313 (573)
T 3uto_A 241 LFEKVADEH----NKMSEDEAVEYMRQVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSV 313 (573)
T ss_dssp HHHHHTCTT----SCEEHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSEE
T ss_pred HHHHHHHhC----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCChhhccccCCCCCCEEEeeccceeEccCCCce
Confidence 999986432 34999999999999999999999998 9999999999999854 899999999998775443
Q ss_pred -CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcccC
Q 006677 497 -TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQN 575 (635)
Q Consensus 497 -~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 575 (635)
...||+.|||||++.+..|+.++||||+||++|||++|+.||.+.+.. .....+....+... +. ....
T Consensus 314 ~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~------~~~~~i~~~~~~~~--~~---~~~~ 382 (573)
T 3uto_A 314 KVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDD------ETLRNVKSCDWNMD--DS---AFSG 382 (573)
T ss_dssp EEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH------HHHHHHHTTCCCCC--SG---GGTT
T ss_pred eeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH------HHHHHHHhCCCCCC--cc---cccC
Confidence 346899999999999999999999999999999999999999865422 22223222221110 00 1112
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006677 576 IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 576 ~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 607 (635)
++ ..+.+|+.+||+.||++|||+.|++++
T Consensus 383 ~s---~~~~dli~~~L~~dp~~R~t~~e~l~H 411 (573)
T 3uto_A 383 IS---EDGKDFIRKLLLADPNTRMTIHQALEH 411 (573)
T ss_dssp SC---HHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred CC---HHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 22 345677789999999999999999874
No 21
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=9.3e-43 Score=361.05 Aligned_cols=278 Identities=38% Similarity=0.681 Sum_probs=225.6
Q ss_pred CCChHHHHHHh-----hccccccCceEEEEEEecCCCeEEEEEeecccC--ChHHHHHHHHHHHhhcCCCceeceeEEEE
Q 006677 332 NFDLEDLLRAS-----AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYY 404 (635)
Q Consensus 332 ~~~~~~l~~~~-----~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~ 404 (635)
.|+..++.... .+.||+|+||.||+|...+++.||||++..... ....+.+|++++.++ +||||+++++++.
T Consensus 19 ~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~ 97 (326)
T 3uim_A 19 RFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMA-VHRNLLRLRGFCM 97 (326)
T ss_dssp ECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTC-CCTTBCCCCEEEC
T ss_pred eecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhc-cCCCccceEEEEe
Confidence 45556655444 468999999999999988899999999976532 234789999999999 8999999999999
Q ss_pred eCCeeEEEEEeccCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEe
Q 006677 405 SKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCIS 484 (635)
Q Consensus 405 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~ 484 (635)
..+..++||||+++|+|.++++.... ....+++..+..++.|++.||+|||+...+.|+||||||+|||++.++.+||+
T Consensus 98 ~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~ 176 (326)
T 3uim_A 98 TPTERLLVYPYMANGSVASCLRERPE-SQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVG 176 (326)
T ss_dssp CSSCCEEEEECCTTCBHHHHHHCCST-TCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEEC
T ss_pred cCCceEEEEEeccCCCHHHHHHhccc-cCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEec
Confidence 99999999999999999999986543 34459999999999999999999999922239999999999999999999999
Q ss_pred ecCCCCCCCCCC-----CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCC--CCCCCChhHHHHHHh
Q 006677 485 DFGLTPLMNVPA-----TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPT--RDDMVDLPRWVQSVV 557 (635)
Q Consensus 485 DfGla~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~--~~~~~~~~~~~~~~~ 557 (635)
|||++....... ...+|+.|+|||++.+..++.++||||||+++|||++|+.||.... .........|+....
T Consensus 177 Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 256 (326)
T 3uim_A 177 DFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLL 256 (326)
T ss_dssp CCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTT
T ss_pred cCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHh
Confidence 999997654322 2347889999999998889999999999999999999999996321 222334566666655
Q ss_pred hhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhh
Q 006677 558 REEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVR 612 (635)
Q Consensus 558 ~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~ 612 (635)
.........+.... .....+....+.+++.+||+.||++|||+.|++++|+...
T Consensus 257 ~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~ 310 (326)
T 3uim_A 257 KEKKLEALVDVDLQ-GNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDG 310 (326)
T ss_dssp SSCCSTTSSCTTCT-TSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSS
T ss_pred hchhhhhhcChhhc-cccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcc
Confidence 55555555444432 2334677888999999999999999999999999998644
No 22
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=6.9e-43 Score=361.50 Aligned_cols=257 Identities=24% Similarity=0.358 Sum_probs=202.6
Q ss_pred hccccccCceEEEEEEecCCCeEEEEEeecccCChHHHHHHHHHHHhhcCCCceeceeEEEEeCC----eeEEEEEeccC
Q 006677 343 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKD----EKLLVYDYFAS 418 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~----~~~lv~e~~~~ 418 (635)
.++||+|+||+||+|+.. ++.||||++.........+++|+.++.++ +||||+++++++.... ..++||||+++
T Consensus 29 ~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~~~~~lv~e~~~~ 106 (322)
T 3soc_A 29 LEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDKQSWQNEYEVYSLPGM-KHENILQFIGAEKRGTSVDVDLWLITAFHEK 106 (322)
T ss_dssp EEEEECSTTCEEEEEEET-TEEEEEEEECGGGHHHHHHHHHHHTSTTC-CCTTBCCEEEEEEEECSSSEEEEEEEECCTT
T ss_pred hheecccCceEEEEEEEC-CCEEEEEEeecCchHHHHHHHHHHHHhcC-CCCCchhhcceeccCCCCCceEEEEEecCCC
Confidence 568999999999999976 78999999976544455666788888888 8999999999998754 36999999999
Q ss_pred CChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc----------CCCCceecCCCCCCeEEcCCCCeEEeecCC
Q 006677 419 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSM----------GGPKFTHGNIKASNVLINQDLDGCISDFGL 488 (635)
Q Consensus 419 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~----------~~~~ivH~Dlk~~NIll~~~~~~ki~DfGl 488 (635)
|+|.++++.. .+++..+..++.|++.||+|||+. + |+||||||+|||++.++.+||+|||+
T Consensus 107 g~L~~~l~~~------~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~---ivH~Dlkp~Nill~~~~~~kL~DFg~ 177 (322)
T 3soc_A 107 GSLSDFLKAN------VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPA---ISHRDIKSKNVLLKNNLTACIADFGL 177 (322)
T ss_dssp CBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECE---EECSCCSGGGEEECTTCCEEECCCTT
T ss_pred CCHHHHHHhc------CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCC---EEeCCCChHhEEECCCCeEEEccCCc
Confidence 9999999742 389999999999999999999998 7 99999999999999999999999999
Q ss_pred CCCCCCC------CCCCCCCcccCcccccCC-----CCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChh-------
Q 006677 489 TPLMNVP------ATPSRSAGYRAPEVIETR-----KHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLP------- 550 (635)
Q Consensus 489 a~~~~~~------~~~~~~~~y~aPE~~~~~-----~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~------- 550 (635)
++..... ....+|+.|+|||++.+. .++.++|||||||++|||+||+.||............
T Consensus 178 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~ 257 (322)
T 3soc_A 178 ALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHP 257 (322)
T ss_dssp CEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSC
T ss_pred ccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCC
Confidence 9654332 224578899999999863 4567889999999999999999999876544332221
Q ss_pred ---HHHHHHhhhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhccC
Q 006677 551 ---RWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 615 (635)
Q Consensus 551 ---~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~~~~ 615 (635)
.+.......... .... ...........+.+++.+||+.||++|||+.|+++.|+++.+..
T Consensus 258 ~~~~~~~~~~~~~~~-~~~~----~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~~ 320 (322)
T 3soc_A 258 SLEDMQEVVVHKKKR-PVLR----DYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRLT 320 (322)
T ss_dssp CHHHHHHHHTTSCCC-CCCC----GGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred chhhhhhhhhcccCC-CCcc----ccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 111111111111 1111 11111244566889999999999999999999999999998643
No 23
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=6.6e-42 Score=351.88 Aligned_cols=253 Identities=28% Similarity=0.425 Sum_probs=196.9
Q ss_pred hccccccCceEEEEEEecCCCeEEEEEeecccCC---hHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEeccCC
Q 006677 343 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASG 419 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g 419 (635)
.+.||+|+||+||+|.. +++.||||++...... .+.+.+|++++.++ +||||+++++++...+..++||||+++|
T Consensus 42 ~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~~~ 119 (309)
T 3p86_A 42 KEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRL-RHPNIVLFMGAVTQPPNLSIVTEYLSRG 119 (309)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHC-CCTTBCCEEEEECSTTCCEEEEECCTTC
T ss_pred eeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEECCceEEEEecCCCC
Confidence 57899999999999987 4788999999765433 34688899999999 8999999999999999999999999999
Q ss_pred ChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCC----
Q 006677 420 SLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP---- 495 (635)
Q Consensus 420 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~---- 495 (635)
+|.+++.... ....+++..+..++.|++.||+|||+.+ ++|+||||||+||+++.++.+||+|||+++.....
T Consensus 120 ~L~~~l~~~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~~-~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~ 196 (309)
T 3p86_A 120 SLYRLLHKSG--AREQLDERRRLSMAYDVAKGMNYLHNRN-PPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSS 196 (309)
T ss_dssp BHHHHHHSTT--HHHHSCHHHHHHHHHHHHHHHHHHHTSS-SCCCCTTCCGGGEEECTTCCEEECCCC------------
T ss_pred cHHHHHhhcC--CCCCCCHHHHHHHHHHHHHHHHHHHcCC-CCEECCCCChhhEEEeCCCcEEECCCCCCcccccccccc
Confidence 9999997532 1224899999999999999999999985 55999999999999999999999999999765433
Q ss_pred CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcccC
Q 006677 496 ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQN 575 (635)
Q Consensus 496 ~~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 575 (635)
....+|+.|+|||++.+..++.++|||||||++|||++|+.||...... ............. ..
T Consensus 197 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~------~~~~~~~~~~~~~----------~~ 260 (309)
T 3p86_A 197 KSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPA------QVVAAVGFKCKRL----------EI 260 (309)
T ss_dssp -----CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHH------HHHHHHHHSCCCC----------CC
T ss_pred ccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHhcCCCC----------CC
Confidence 2345788999999999999999999999999999999999999754321 1111111111110 00
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhccCC
Q 006677 576 IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDS 616 (635)
Q Consensus 576 ~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~~~~~ 616 (635)
.......+.+++.+||+.+|++|||++|+++.|+.+.....
T Consensus 261 ~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~~ 301 (309)
T 3p86_A 261 PRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAV 301 (309)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC---
T ss_pred CccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhCC
Confidence 11122356778889999999999999999999999987654
No 24
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=2.3e-41 Score=340.65 Aligned_cols=247 Identities=25% Similarity=0.436 Sum_probs=207.1
Q ss_pred hccccccCceEEEEEEecCCCeEEEEEeecccCChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEeccCCChh
Q 006677 343 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLS 422 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~ 422 (635)
.+.||+|+||+||+|...+++.||+|++.......+++.+|++++.++ +||||+++++++.+++..++||||+++|+|.
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 93 (269)
T 4hcu_A 15 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKL-SHPKLVQLYGVCLEQAPICLVFEFMEHGCLS 93 (269)
T ss_dssp EEEEEECSSCEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTC-CCTTBCCEEEEECSSSSEEEEEECCTTCBHH
T ss_pred eheecCCCccEEEEEEecCCCeEEEEEecccccCHHHHHHHHHHHHhC-CCCCEeeEEEEEecCCceEEEEEeCCCCcHH
Confidence 468999999999999998889999999988777788899999999999 8999999999999999999999999999999
Q ss_pred hhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCC-----CC
Q 006677 423 TLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP-----AT 497 (635)
Q Consensus 423 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~-----~~ 497 (635)
+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++...... ..
T Consensus 94 ~~l~~~~----~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 166 (269)
T 4hcu_A 94 DYLRTQR----GLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG 166 (269)
T ss_dssp HHHHTTT----TCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTS
T ss_pred HHHHhcC----cccCHHHHHHHHHHHHHHHHHHHhCC---eecCCcchheEEEcCCCCEEeccccccccccccccccccC
Confidence 9997533 34899999999999999999999998 999999999999999999999999999765432 23
Q ss_pred CCCCCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcccCh
Q 006677 498 PSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNI 576 (635)
Q Consensus 498 ~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 576 (635)
..+++.|+|||++.+..++.++||||||+++|||++ |+.||...... .....+... ... . ..
T Consensus 167 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~------~~~~~~~~~-~~~--~--------~~ 229 (269)
T 4hcu_A 167 TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS------EVVEDISTG-FRL--Y--------KP 229 (269)
T ss_dssp TTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH------HHHHHHHTT-CCC--C--------CC
T ss_pred cccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHH------HHHHHHhcC-ccC--C--------CC
Confidence 345678999999998899999999999999999999 99999754321 112221111 100 0 00
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhcc
Q 006677 577 EEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQS 614 (635)
Q Consensus 577 ~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~~~ 614 (635)
......+.+++.+||+.+|++|||++|++++|+++.+.
T Consensus 230 ~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 230 RLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267 (269)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred CcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence 11223567788899999999999999999999999865
No 25
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.8e-41 Score=348.78 Aligned_cols=249 Identities=25% Similarity=0.433 Sum_probs=204.0
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeeccc-CChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEeccCCC
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVV-VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGS 420 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 420 (635)
.++||+|+||+||+|... ++..||+|++.... ...+.+.+|++++.++ +||||+++++++.+++..++||||+++|+
T Consensus 15 ~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~~~~ 93 (310)
T 3s95_A 15 GEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCL-EHPNVLKFIGVLYKDKRLNFITEYIKGGT 93 (310)
T ss_dssp EEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEETTEEEEEEECCTTCB
T ss_pred cceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhC-CCcCcccEEEEEecCCeeEEEEEecCCCc
Confidence 578999999999999975 47889999885532 2356788999999999 89999999999999999999999999999
Q ss_pred hhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCCC----
Q 006677 421 LSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA---- 496 (635)
Q Consensus 421 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~~---- 496 (635)
|.++++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 94 L~~~l~~~~----~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 166 (310)
T 3s95_A 94 LRGIIKSMD----SQYPWSQRVSFAKDIASGMAYLHSMN---IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPE 166 (310)
T ss_dssp HHHHHHHCC----TTSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEECTTSCEEECCCTTCEECC-------
T ss_pred HHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCcCeEEECCCCCEEEeecccceeccccccccc
Confidence 999997532 34999999999999999999999998 9999999999999999999999999997653321
Q ss_pred --------------CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCC---ChhHHHHHHhhh
Q 006677 497 --------------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMV---DLPRWVQSVVRE 559 (635)
Q Consensus 497 --------------~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~---~~~~~~~~~~~~ 559 (635)
...+|+.|+|||++.+..++.++||||||+++|||++|..||......... ..........
T Consensus 167 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-- 244 (310)
T 3s95_A 167 GLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRYC-- 244 (310)
T ss_dssp -------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHHHTC--
T ss_pred ccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhccccccC--
Confidence 335788899999999999999999999999999999999998754332221 1111111100
Q ss_pred ccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhccCCC
Q 006677 560 EWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSE 617 (635)
Q Consensus 560 ~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~~~~~~ 617 (635)
.......+.+++.+||+.||++|||+.|+++.|+++......
T Consensus 245 ----------------~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~~~ 286 (310)
T 3s95_A 245 ----------------PPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHLAG 286 (310)
T ss_dssp ----------------CTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHH
T ss_pred ----------------CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhccC
Confidence 011123467788899999999999999999999999865443
No 26
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=2e-41 Score=357.17 Aligned_cols=254 Identities=26% Similarity=0.414 Sum_probs=204.4
Q ss_pred hccccccCceEEEEEEec--------CCCeEEEEEeecccC--ChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEE
Q 006677 343 AEVLGKGSYGTAYKAVLE--------ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLV 412 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~--------~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv 412 (635)
.+.||+|+||+||+|... ++..||||+++.... ..+.+.+|++++.++.+||||+++++++...+..++|
T Consensus 86 ~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~lv 165 (370)
T 2psq_A 86 GKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVI 165 (370)
T ss_dssp EEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSSSCEEE
T ss_pred eeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCCCEEEE
Confidence 578999999999999863 245699999976532 2356889999999997899999999999999999999
Q ss_pred EEeccCCChhhhccCCCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCe
Q 006677 413 YDYFASGSLSTLLHGNRGA-----------GRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDG 481 (635)
Q Consensus 413 ~e~~~~g~L~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ 481 (635)
|||+++|+|.+++...... ....+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+
T Consensus 166 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~ 242 (370)
T 2psq_A 166 VEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVM 242 (370)
T ss_dssp EECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCE
T ss_pred EEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---eeccccchhhEEECCCCCE
Confidence 9999999999999764321 1234899999999999999999999998 9999999999999999999
Q ss_pred EEeecCCCCCCCCCC------CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHH
Q 006677 482 CISDFGLTPLMNVPA------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQ 554 (635)
Q Consensus 482 ki~DfGla~~~~~~~------~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~ 554 (635)
||+|||+++...... ...+++.|+|||++.+..++.++|||||||++|||+| |..||......+ + ..
T Consensus 243 kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~---~---~~ 316 (370)
T 2psq_A 243 KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE---L---FK 316 (370)
T ss_dssp EECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG---H---HH
T ss_pred EEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHH---H---HH
Confidence 999999997654322 1234678999999999999999999999999999999 999998654322 1 11
Q ss_pred HHhhhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhccCC
Q 006677 555 SVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDS 616 (635)
Q Consensus 555 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~~~~~ 616 (635)
.+....... ........+.+++.+||+.+|++||++.|+++.|+.+.....
T Consensus 317 -~~~~~~~~~----------~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~~~ 367 (370)
T 2psq_A 317 -LLKEGHRMD----------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT 367 (370)
T ss_dssp -HHHTTCCCC----------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred -HHhcCCCCC----------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHhc
Confidence 111111110 111223457778889999999999999999999999986544
No 27
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=2.4e-41 Score=345.73 Aligned_cols=240 Identities=22% Similarity=0.346 Sum_probs=197.5
Q ss_pred hccccccCceEEEEEEe-cCCCeEEEEEeecccC-ChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEeccCCC
Q 006677 343 AEVLGKGSYGTAYKAVL-EESTTVVVKRLKEVVV-GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGS 420 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~-~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 420 (635)
.+.||+|+||+||+|.. .+++.||+|++..... ..+.+.+|+.++.++ +||||+++++++...+..++||||+++|+
T Consensus 25 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~~~~ 103 (297)
T 3fxz_A 25 FEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMREN-KNPNIVNYLDSYLVGDELWVVMEYLAGGS 103 (297)
T ss_dssp CEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEEECCTTCB
T ss_pred eeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcC-CCCCCCeEeEEEEECCEEEEEEECCCCCC
Confidence 46799999999999995 4588999999875543 466788999999999 99999999999999999999999999999
Q ss_pred hhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCC----C
Q 006677 421 LSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP----A 496 (635)
Q Consensus 421 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~----~ 496 (635)
|.+++... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++...... .
T Consensus 104 L~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 174 (297)
T 3fxz_A 104 LTDVVTET------CMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS 174 (297)
T ss_dssp HHHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBC
T ss_pred HHHHHhhc------CCCHHHHHHHHHHHHHHHHHHHhCC---ceeCCCCHHHEEECCCCCEEEeeCCCceecCCcccccC
Confidence 99999743 3899999999999999999999998 999999999999999999999999998765432 2
Q ss_pred CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcccCh
Q 006677 497 TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNI 576 (635)
Q Consensus 497 ~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 576 (635)
...+|+.|+|||++.+..++.++|||||||++|||++|+.||..... .............. ....
T Consensus 175 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~------~~~~~~~~~~~~~~---------~~~~ 239 (297)
T 3fxz_A 175 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP------LRALYLIATNGTPE---------LQNP 239 (297)
T ss_dssp CCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH------HHHHHHHHHHCSCC---------CSCG
T ss_pred CccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHhCCCCC---------CCCc
Confidence 34578899999999999999999999999999999999999975431 11111111111110 1111
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006677 577 EEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 577 ~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 607 (635)
......+.+++.+||+.||++|||++|++++
T Consensus 240 ~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 270 (297)
T 3fxz_A 240 EKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 270 (297)
T ss_dssp GGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred cccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 2223456778889999999999999999873
No 28
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=2.4e-41 Score=350.38 Aligned_cols=254 Identities=27% Similarity=0.453 Sum_probs=202.0
Q ss_pred hccccccCceEEEEEEec----CCCeEEEEEeecccC--ChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEec
Q 006677 343 AEVLGKGSYGTAYKAVLE----ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYF 416 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~----~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~ 416 (635)
.+.||+|+||+||+|... .+..||||+++.... ..+.+.+|++++.++ +||||+++++++.+.+..++||||+
T Consensus 54 ~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~ 132 (325)
T 3kul_A 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQF-DHPNIIRLEGVVTRGRLAMIVTEYM 132 (325)
T ss_dssp EEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECGGGCCEEEEECC
T ss_pred eeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEEeCCccEEEeeCC
Confidence 578999999999999974 344599999976432 245788999999999 8999999999999999999999999
Q ss_pred cCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCCC
Q 006677 417 ASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA 496 (635)
Q Consensus 417 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~~ 496 (635)
++|+|.++++... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 133 ~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 205 (325)
T 3kul_A 133 ENGSLDTFLRTHD----GQFTIMQLVGMLRGVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDP 205 (325)
T ss_dssp TTCBHHHHHHTTT----TCSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCSSCEECC---
T ss_pred CCCcHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCcceEEECCCCCEEECCCCcccccccCc
Confidence 9999999997532 34999999999999999999999998 9999999999999999999999999997664332
Q ss_pred C-------CCCCCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccchh
Q 006677 497 T-------PSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDV 568 (635)
Q Consensus 497 ~-------~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 568 (635)
. ..+++.|+|||++.+..++.++|||||||++|||++ |..||...... .....+... ..
T Consensus 206 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~------~~~~~~~~~-~~------ 272 (325)
T 3kul_A 206 DAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNR------DVISSVEEG-YR------ 272 (325)
T ss_dssp -CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHH------HHHHHHHTT-CC------
T ss_pred cceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHH------HHHHHHHcC-CC------
Confidence 1 124567999999998899999999999999999999 99999754321 111111111 10
Q ss_pred hhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhccCCCCCCC
Q 006677 569 ELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSENRPS 621 (635)
Q Consensus 569 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~~~~~~~~~~ 621 (635)
.+........+.+++.+||+.||++|||+.|+++.|+.+.......+.+
T Consensus 273 ----~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~~~~~~ 321 (325)
T 3kul_A 273 ----LPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPESLRAT 321 (325)
T ss_dssp ----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC-----
T ss_pred ----CCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCccccccc
Confidence 0111122346778888999999999999999999999999776654443
No 29
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=3.7e-41 Score=338.85 Aligned_cols=248 Identities=26% Similarity=0.415 Sum_probs=205.3
Q ss_pred hccccccCceEEEEEEecCCCeEEEEEeecccCChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEeccCCChh
Q 006677 343 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLS 422 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~ 422 (635)
.+.||+|+||+||+|...++..||+|+++......+++.+|++++.++ +||||+++++++...+..++||||+++++|.
T Consensus 13 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 91 (268)
T 3sxs_A 13 LKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKL-SHPKLVKFYGVCSKEYPIYIVTEYISNGCLL 91 (268)
T ss_dssp EEEEEEETTEEEEEEEETTTEEEEEEEECBTTBCHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSEEEEEECCTTCBHH
T ss_pred eeeeccCCCceEEEEEecCceeEEEEEeccCCCcHHHHHHHHHHHHhC-CCCCEeeEEEEEccCCceEEEEEccCCCcHH
Confidence 468999999999999998888999999988777788899999999999 8999999999999999999999999999999
Q ss_pred hhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCCC-----C
Q 006677 423 TLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA-----T 497 (635)
Q Consensus 423 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~~-----~ 497 (635)
+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++....... .
T Consensus 92 ~~l~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~ 164 (268)
T 3sxs_A 92 NYLRSHG----KGLEPSQLLEMCYDVCEGMAFLESHQ---FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVG 164 (268)
T ss_dssp HHHHHHG----GGCCHHHHHHHHHHHHHHHHHHHHTT---EEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEECCS
T ss_pred HHHHHcC----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCcCcceEEECCCCCEEEccCccceecchhhhhcccC
Confidence 9997532 34899999999999999999999998 9999999999999999999999999987654332 2
Q ss_pred CCCCCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcccCh
Q 006677 498 PSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNI 576 (635)
Q Consensus 498 ~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 576 (635)
..+++.|+|||.+.+..++.++||||||+++|||++ |+.||...... ............ .. .
T Consensus 165 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~------~~~~~~~~~~~~---~~-----~--- 227 (268)
T 3sxs_A 165 TKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNS------EVVLKVSQGHRL---YR-----P--- 227 (268)
T ss_dssp CCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHH------HHHHHHHTTCCC---CC-----C---
T ss_pred CCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChH------HHHHHHHcCCCC---CC-----C---
Confidence 334567999999998889999999999999999999 99999754321 111111111100 00 0
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhccC
Q 006677 577 EEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 615 (635)
Q Consensus 577 ~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~~~~ 615 (635)
......+.+++.+||+.+|++|||+.|++++|+.+++..
T Consensus 228 ~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~~ 266 (268)
T 3sxs_A 228 HLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREKD 266 (268)
T ss_dssp TTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC--
T ss_pred CcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhcc
Confidence 111235677888999999999999999999999987654
No 30
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=7.7e-41 Score=339.34 Aligned_cols=248 Identities=22% Similarity=0.347 Sum_probs=204.3
Q ss_pred hccccccCceEEEEEEecCCCeEEEEEeecccCChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEeccCCChh
Q 006677 343 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLS 422 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~ 422 (635)
.+.||+|+||+||+|...++..||+|+++......+++.+|++++.++ +||||+++++++...+..++||||+++|+|.
T Consensus 29 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 107 (283)
T 3gen_A 29 LKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNL-SHEKLVQLYGVCTKQRPIFIITEYMANGCLL 107 (283)
T ss_dssp EEECC---CEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTC-CCTTBCCEEEEECSSSSEEEEECCCTTCBHH
T ss_pred HhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCCHHHHHHHHHHHhcC-CCCCEeeEEEEEecCCCeEEEEeccCCCcHH
Confidence 468999999999999999888999999988777788899999999999 8999999999999999999999999999999
Q ss_pred hhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCC-----CC
Q 006677 423 TLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP-----AT 497 (635)
Q Consensus 423 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~-----~~ 497 (635)
+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++...... ..
T Consensus 108 ~~l~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 180 (283)
T 3gen_A 108 NYLREMR----HRFQTQQLLEMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVG 180 (283)
T ss_dssp HHHHCGG----GCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHSTTS
T ss_pred HHHHHhc----cCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCccceEEEcCCCCEEEccccccccccccccccccC
Confidence 9997532 24899999999999999999999998 999999999999999999999999999765432 23
Q ss_pred CCCCCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcccCh
Q 006677 498 PSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNI 576 (635)
Q Consensus 498 ~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 576 (635)
..+++.|+|||++.+..++.++||||||+++|||+| |+.||...... .....+... ... ...
T Consensus 181 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~------~~~~~~~~~-~~~----------~~~ 243 (283)
T 3gen_A 181 SKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS------ETAEHIAQG-LRL----------YRP 243 (283)
T ss_dssp TTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHH------HHHHHHHTT-CCC----------CCC
T ss_pred CccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChh------HHHHHHhcc-cCC----------CCC
Confidence 345678999999998899999999999999999998 99999754321 111111111 000 000
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhccC
Q 006677 577 EEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 615 (635)
Q Consensus 577 ~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~~~~ 615 (635)
......+.+++.+||+.+|++|||++|++++|+++.+.+
T Consensus 244 ~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~e 282 (283)
T 3gen_A 244 HLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDEE 282 (283)
T ss_dssp TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred CcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhcc
Confidence 111235677888999999999999999999999998654
No 31
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=3.5e-40 Score=338.64 Aligned_cols=270 Identities=29% Similarity=0.531 Sum_probs=214.4
Q ss_pred CCChHHHHHHhh-----------ccccccCceEEEEEEecCCCeEEEEEeecccC-----ChHHHHHHHHHHHhhcCCCc
Q 006677 332 NFDLEDLLRASA-----------EVLGKGSYGTAYKAVLEESTTVVVKRLKEVVV-----GKRDFEQQMEIVGRVGQHPN 395 (635)
Q Consensus 332 ~~~~~~l~~~~~-----------~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~-----~~~~~~~e~~~l~~l~~h~n 395 (635)
.|..+++..++. +.||+|+||.||+|.. +++.||+|++..... ..+.+.+|++++.++ +|||
T Consensus 14 ~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~ 91 (307)
T 2nru_A 14 SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKC-QHEN 91 (307)
T ss_dssp ECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHC-CCTT
T ss_pred cccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhc-CCCC
Confidence 467777776652 6799999999999987 478999999875421 246788999999999 9999
Q ss_pred eeceeEEEEeCCeeEEEEEeccCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEE
Q 006677 396 VVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLI 475 (635)
Q Consensus 396 iv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll 475 (635)
|+++++++...+..++||||+++|+|.+++..... ...+++..+..++.|++.||+|||+.+ |+||||||+||++
T Consensus 92 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dlkp~Nili 166 (307)
T 2nru_A 92 LVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDG--TPPLSWHMRCKIAQGAANGINFLHENH---HIHRDIKSANILL 166 (307)
T ss_dssp BCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGG--CCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEE
T ss_pred eEEEEEEEecCCceEEEEEecCCCcHHHHHHhccC--CCCCCHHHHHHHHHHHHHHHHHHhcCC---eecCCCCHHHEEE
Confidence 99999999999999999999999999999975432 345899999999999999999999998 9999999999999
Q ss_pred cCCCCeEEeecCCCCCCCCC------CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCCh
Q 006677 476 NQDLDGCISDFGLTPLMNVP------ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDL 549 (635)
Q Consensus 476 ~~~~~~ki~DfGla~~~~~~------~~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~ 549 (635)
++++.+||+|||++...... ....+++.|+|||.+.+ .++.++||||||+++|||++|..||......+..
T Consensus 167 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~-- 243 (307)
T 2nru_A 167 DEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLL-- 243 (307)
T ss_dssp CTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBT--
T ss_pred cCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHH--
Confidence 99999999999998765432 22357889999999865 5889999999999999999999999876544322
Q ss_pred hHHHHHHhhhcc-ccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhc
Q 006677 550 PRWVQSVVREEW-TAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQ 613 (635)
Q Consensus 550 ~~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~~ 613 (635)
..+......... ....++..+ ..........+.+++.+||+.+|++|||+.|++++|+++..
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 244 LDIKEEIEDEEKTIEDYIDKKM--NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp THHHHHHHTTSCCHHHHSCSSC--SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred HHHHHHhhhhhhhhhhhccccc--cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 222222221111 111112111 11234566778899999999999999999999999999864
No 32
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=6.4e-41 Score=342.91 Aligned_cols=251 Identities=23% Similarity=0.403 Sum_probs=194.3
Q ss_pred hccccccCceEEEEEEecCCCeEEEEEeecccCChHHHHHHHHHHHhh-cCCCceeceeEEEEeC----CeeEEEEEecc
Q 006677 343 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRV-GQHPNVVPLRAYYYSK----DEKLLVYDYFA 417 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l-~~h~niv~l~~~~~~~----~~~~lv~e~~~ 417 (635)
.+.||+|+||+||+|.. +++.||||++... ....+.+|.+++... .+||||+++++++... ...++||||++
T Consensus 13 ~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~--~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~ 89 (301)
T 3q4u_A 13 LECVGKGRYGEVWRGSW-QGENVAVKIFSSR--DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHE 89 (301)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEECGG--GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEEECCCT
T ss_pred EEeeccCCCcEEEEEEE-CCEEEEEEEeccc--cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEehhhcc
Confidence 46899999999999998 5889999998653 345666777777763 2899999999997653 35789999999
Q ss_pred CCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH--------hcCCCCceecCCCCCCeEEcCCCCeEEeecCCC
Q 006677 418 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIH--------SMGGPKFTHGNIKASNVLINQDLDGCISDFGLT 489 (635)
Q Consensus 418 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH--------~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla 489 (635)
+|+|.++++. ..+++..+..++.|++.||+||| +.+ |+||||||+|||++.++.+||+|||++
T Consensus 90 ~g~L~~~l~~------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~Nill~~~~~~kl~Dfg~a 160 (301)
T 3q4u_A 90 MGSLYDYLQL------TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPA---IAHRDLKSKNILVKKNGQCCIADLGLA 160 (301)
T ss_dssp TCBHHHHHTT------CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCE---EECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred CCCHHHHHhh------cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCC---eecCCCChHhEEEcCCCCEEEeeCCCe
Confidence 9999999953 24999999999999999999999 776 999999999999999999999999998
Q ss_pred CCCCCC--------CCCCCCCcccCcccccCC------CCCCccchhhHHHHHHHHHhC----------CCCCCCCCCCC
Q 006677 490 PLMNVP--------ATPSRSAGYRAPEVIETR------KHSHKSDVYSFGVLLLEMLTG----------KAPLQSPTRDD 545 (635)
Q Consensus 490 ~~~~~~--------~~~~~~~~y~aPE~~~~~------~~~~k~Dvws~Gvvl~el~tg----------~~p~~~~~~~~ 545 (635)
+..... ....+|+.|+|||++.+. .++.++|||||||++|||+|| +.||......+
T Consensus 161 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~ 240 (301)
T 3q4u_A 161 VMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPND 240 (301)
T ss_dssp EEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSS
T ss_pred eecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCC
Confidence 654322 223688999999999876 455799999999999999999 78886543322
Q ss_pred CCChhHHHHHHhhhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHh
Q 006677 546 MVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEV 611 (635)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~ 611 (635)
. .... .............. ............+.+++.+||+.||++|||+.|+++.|+++
T Consensus 241 ~-~~~~-~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 241 P-SFED-MRKVVCVDQQRPNI----PNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp C-CHHH-HHHHHTTSCCCCCC----CGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred c-chhh-hhHHHhccCCCCCC----ChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 1 1111 12211111111111 11111234567788999999999999999999999999976
No 33
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=1.7e-40 Score=343.23 Aligned_cols=239 Identities=20% Similarity=0.305 Sum_probs=196.6
Q ss_pred ccccccCceEEEEEEec-CCCeEEEEEeecccC-ChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEeccCCCh
Q 006677 344 EVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV-GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSL 421 (635)
Q Consensus 344 ~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 421 (635)
+.||+|+||.||+|... +|+.||||++..... ..+.+.+|+.++.++ +||||+++++++...+..++||||+++|+|
T Consensus 51 ~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 129 (321)
T 2c30_A 51 VKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDY-QHFNVVEMYKSYLVGEELWVLMEFLQGGAL 129 (321)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTC-CCTTBCCEEEEEEETTEEEEEECCCCSCBH
T ss_pred EEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhC-CCCCcceEEEEEEECCEEEEEEecCCCCCH
Confidence 47999999999999976 689999999976543 456788999999999 999999999999999999999999999999
Q ss_pred hhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCC----CC
Q 006677 422 STLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP----AT 497 (635)
Q Consensus 422 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~----~~ 497 (635)
.+++.. ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++...... ..
T Consensus 130 ~~~l~~------~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~ 200 (321)
T 2c30_A 130 TDIVSQ------VRLNEEQIATVCEAVLQALAYLHAQG---VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKS 200 (321)
T ss_dssp HHHHTT------CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCC
T ss_pred HHHHHh------cCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCcEEEeeeeeeeecccCcccccc
Confidence 999863 24899999999999999999999998 999999999999999999999999998765432 23
Q ss_pred CCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcccChH
Q 006677 498 PSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNIE 577 (635)
Q Consensus 498 ~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 577 (635)
..+|+.|+|||++.+..++.++||||||+++|||++|+.||..... ......+.... .... ... .
T Consensus 201 ~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~------~~~~~~~~~~~-~~~~-----~~~---~ 265 (321)
T 2c30_A 201 LVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSP------VQAMKRLRDSP-PPKL-----KNS---H 265 (321)
T ss_dssp CCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH------HHHHHHHHHSS-CCCC-----TTG---G
T ss_pred ccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHhcCC-CCCc-----Ccc---c
Confidence 4578899999999999999999999999999999999999975431 11111111111 1000 001 1
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006677 578 EEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 578 ~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 607 (635)
.....+.+++.+||+.||++|||++|++++
T Consensus 266 ~~~~~l~~li~~~l~~dp~~Rps~~ell~h 295 (321)
T 2c30_A 266 KVSPVLRDFLERMLVRDPQERATAQELLDH 295 (321)
T ss_dssp GSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred cCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 122356678889999999999999999885
No 34
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=2.2e-40 Score=343.90 Aligned_cols=253 Identities=15% Similarity=0.178 Sum_probs=204.0
Q ss_pred hccccccCceEEEEEEe-cCCCeEEEEEeecccCChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEeccCCCh
Q 006677 343 AEVLGKGSYGTAYKAVL-EESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSL 421 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 421 (635)
.+.||+|+||+||+|.. .+++.||||++.... ..+.+.+|++++.++.+||||+++++++...+..++||||+ +++|
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~L 91 (330)
T 2izr_A 14 GKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS-RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL-GPSL 91 (330)
T ss_dssp EEECCC-CTTSEEEEEETTTTEEEEEEEEETTC-SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC-CCBH
T ss_pred EEEeeccCCceEEEEEECCCCcEEEEEEecccc-chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC-CCCH
Confidence 46899999999999996 467889999987543 34568899999999989999999999999999999999999 9999
Q ss_pred hhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCC-----eEEeecCCCCCCCCC-
Q 006677 422 STLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLD-----GCISDFGLTPLMNVP- 495 (635)
Q Consensus 422 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~-----~ki~DfGla~~~~~~- 495 (635)
.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++. +||+|||+++.....
T Consensus 92 ~~~~~~~~----~~~~~~~~~~i~~qi~~~l~~LH~~~---iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~ 164 (330)
T 2izr_A 92 EDLFDLCD----RTFSLKTVLMIAIQLISRMEYVHSKN---LIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPE 164 (330)
T ss_dssp HHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTT
T ss_pred HHHHHHcC----CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCC
Confidence 99997542 34999999999999999999999998 999999999999998887 999999999765332
Q ss_pred ----------CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcccccc
Q 006677 496 ----------ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEV 565 (635)
Q Consensus 496 ----------~~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 565 (635)
....||+.|+|||++.+..++.++|||||||++|||++|+.||......+. ......+........
T Consensus 165 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~---~~~~~~i~~~~~~~~- 240 (330)
T 2izr_A 165 TKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTL---KERYQKIGDTKRATP- 240 (330)
T ss_dssp TCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSH---HHHHHHHHHHHHHSC-
T ss_pred CCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccH---HHHHHHHHhhhccCC-
Confidence 234578999999999999999999999999999999999999987643332 222222211111000
Q ss_pred chhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhccC
Q 006677 566 FDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 615 (635)
Q Consensus 566 ~d~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~~~~ 615 (635)
.+ .+ ... .. .+.+++..||+.+|.+||+++++.+.|+++.+..
T Consensus 241 ~~-~~--~~~---~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~ 283 (330)
T 2izr_A 241 IE-VL--CEN---FP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRK 283 (330)
T ss_dssp HH-HH--TTT---CH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred HH-HH--hcc---Ch-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHc
Confidence 00 00 001 11 6778888999999999999999999999988654
No 35
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.3e-40 Score=350.83 Aligned_cols=261 Identities=25% Similarity=0.357 Sum_probs=207.6
Q ss_pred hccccccCceEEEEEEec--------CCCeEEEEEeecccCC--hHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEE
Q 006677 343 AEVLGKGSYGTAYKAVLE--------ESTTVVVKRLKEVVVG--KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLV 412 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~--------~~~~vavK~l~~~~~~--~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv 412 (635)
.+.||+|+||+||+|... .+..||||+++..... ...+.+|++++.++.+||||+++++++..++..++|
T Consensus 74 ~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~lv 153 (382)
T 3tt0_A 74 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVI 153 (382)
T ss_dssp EEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred eeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCCceEEE
Confidence 578999999999999863 2356999999765332 356889999999998899999999999999999999
Q ss_pred EEeccCCChhhhccCCCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCe
Q 006677 413 YDYFASGSLSTLLHGNRGA-----------GRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDG 481 (635)
Q Consensus 413 ~e~~~~g~L~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ 481 (635)
|||+++|+|.+++...... ....+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+
T Consensus 154 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~ 230 (382)
T 3tt0_A 154 VEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVM 230 (382)
T ss_dssp EECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCE
T ss_pred EEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCcceEEEcCCCcE
Confidence 9999999999999764321 1235899999999999999999999998 9999999999999999999
Q ss_pred EEeecCCCCCCCCCC------CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHH
Q 006677 482 CISDFGLTPLMNVPA------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQ 554 (635)
Q Consensus 482 ki~DfGla~~~~~~~------~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~ 554 (635)
||+|||+++...... ...+++.|+|||++.+..++.++|||||||++|||++ |..||..... .....
T Consensus 231 kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~------~~~~~ 304 (382)
T 3tt0_A 231 KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV------EELFK 304 (382)
T ss_dssp EECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH------HHHHH
T ss_pred EEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH------HHHHH
Confidence 999999998664322 2234677999999999999999999999999999999 9999975432 11222
Q ss_pred HHhhhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhccCCCCCCCCc
Q 006677 555 SVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSENRPSSE 623 (635)
Q Consensus 555 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~~~~~~~~~~~~ 623 (635)
.+. ....... .......+.+++.+||+.||++|||++|++++|+.+......++....
T Consensus 305 ~~~-~~~~~~~----------~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~~~~~~~ 362 (382)
T 3tt0_A 305 LLK-EGHRMDK----------PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQEMGYY 362 (382)
T ss_dssp HHH-TTCCCCC----------CSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSCSCC----
T ss_pred HHH-cCCCCCC----------CccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhcCCCCCC
Confidence 211 1111100 011234567788899999999999999999999999987776555443
No 36
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=7.5e-41 Score=362.60 Aligned_cols=248 Identities=24% Similarity=0.440 Sum_probs=205.5
Q ss_pred hccccccCceEEEEEEecCCCeEEEEEeecccCChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEeccCCChh
Q 006677 343 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLS 422 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~ 422 (635)
.+.||+|+||+||+|.+.++..||||+++......+.+.+|+++++++ +||||+++++++. .+..++||||+++|+|.
T Consensus 193 ~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~l~~~~~-~~~~~lv~e~~~~g~L~ 270 (454)
T 1qcf_A 193 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTL-QHDKLVKLHAVVT-KEPIYIITEFMAKGSLL 270 (454)
T ss_dssp EEEEECCSSEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHTTC-CCTTBCCEEEEEC-SSSCEEEECCCTTCBHH
T ss_pred EEEcccCCceEEEEEEECCccEEEEEEecCCCccHHHHHHHHHHHhhC-CCCCEeeEEEEEe-CCccEEEEeecCCCcHH
Confidence 578999999999999998888999999987766788999999999999 9999999999986 66789999999999999
Q ss_pred hhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCC-----CC
Q 006677 423 TLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP-----AT 497 (635)
Q Consensus 423 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~-----~~ 497 (635)
++++... ...+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++..... ..
T Consensus 271 ~~l~~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~ 344 (454)
T 1qcf_A 271 DFLKSDE---GSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREG 344 (454)
T ss_dssp HHHHSHH---HHTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHTTCS
T ss_pred HHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceeccCC
Confidence 9997532 124889999999999999999999998 999999999999999999999999999876432 22
Q ss_pred CCCCCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcccCh
Q 006677 498 PSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNI 576 (635)
Q Consensus 498 ~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 576 (635)
..++..|+|||++....++.++|||||||++|||+| |+.||.+.... .....+. .... .+..
T Consensus 345 ~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~------~~~~~i~-~~~~----------~~~~ 407 (454)
T 1qcf_A 345 AKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP------EVIRALE-RGYR----------MPRP 407 (454)
T ss_dssp SSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH------HHHHHHH-HTCC----------CCCC
T ss_pred CcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHH------HHHHHHH-cCCC----------CCCC
Confidence 335668999999998899999999999999999999 99999754321 1122111 1111 0111
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhccC
Q 006677 577 EEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 615 (635)
Q Consensus 577 ~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~~~~ 615 (635)
......+.+++.+||+.||++|||++++++.|+++....
T Consensus 408 ~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~~ 446 (454)
T 1qcf_A 408 ENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTAT 446 (454)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSSS
T ss_pred CCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhcc
Confidence 123346778888999999999999999999999887543
No 37
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=1.6e-40 Score=344.14 Aligned_cols=238 Identities=20% Similarity=0.325 Sum_probs=197.0
Q ss_pred hccccccCceEEEEEEe-cCCCeEEEEEeecccCC---hHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEeccC
Q 006677 343 AEVLGKGSYGTAYKAVL-EESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS 418 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~ 418 (635)
.+.||+|+||.||+|.. .+++.||||++...... .+.+.+|+++++++ +||||+++++++...+..++||||+++
T Consensus 20 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~lv~e~~~~ 98 (328)
T 3fe3_A 20 LKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKIL-NHPNIVKLFEVIETEKTLYLIMEYASG 98 (328)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEECCEEEEEEECCCC
Confidence 46899999999999997 56899999999766443 34577899999999 899999999999999999999999999
Q ss_pred CChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCC---
Q 006677 419 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP--- 495 (635)
Q Consensus 419 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~--- 495 (635)
|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 99 ~~L~~~l~~~-----~~l~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~ 170 (328)
T 3fe3_A 99 GEVFDYLVAH-----GRMKEKEARSKFRQIVSAVQYCHQKR---IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKL 170 (328)
T ss_dssp CBHHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSCGG
T ss_pred CcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---EeccCCCHHHEEEcCCCCEEEeeccCceecCCCCcc
Confidence 9999999643 24899999999999999999999998 999999999999999999999999999765433
Q ss_pred CCCCCCCcccCcccccCCCCC-CccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhccc
Q 006677 496 ATPSRSAGYRAPEVIETRKHS-HKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQ 574 (635)
Q Consensus 496 ~~~~~~~~y~aPE~~~~~~~~-~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 574 (635)
....+|+.|+|||++.+..+. .++||||+||++|||++|+.||.+.+ .......+....... .
T Consensus 171 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~------~~~~~~~i~~~~~~~---------p- 234 (328)
T 3fe3_A 171 DAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN------LKELRERVLRGKYRI---------P- 234 (328)
T ss_dssp GTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHCCCCC---------C-
T ss_pred ccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCC------HHHHHHHHHhCCCCC---------C-
Confidence 245689999999999888775 78999999999999999999997543 222222222221110 0
Q ss_pred ChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006677 575 NIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 575 ~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 607 (635)
......+.+++.+|++.||++|||++|++++
T Consensus 235 --~~~s~~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 235 --FYMSTDCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp --TTSCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred --CCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 1112346678889999999999999999884
No 38
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=4.1e-40 Score=336.39 Aligned_cols=255 Identities=17% Similarity=0.192 Sum_probs=204.3
Q ss_pred hccccccCceEEEEEEe-cCCCeEEEEEeecccCChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEeccCCCh
Q 006677 343 AEVLGKGSYGTAYKAVL-EESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSL 421 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 421 (635)
.+.||+|+||.||+|.. .+++.||+|++.... ..+.+.+|++++.++.+|+|++++++++......++||||+ +++|
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L 92 (298)
T 1csn_A 15 GRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS-DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL-GPSL 92 (298)
T ss_dssp EEEEEECSSCEEEEEEETTTTEEEEEEEEECCT-TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC-CCBH
T ss_pred EEEEeecCCEEEEEEEECCCCcEEEEEEeccCC-ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEec-CCCH
Confidence 46799999999999996 468899999986543 34568899999999988999999999999999999999999 9999
Q ss_pred hhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCC-----eEEeecCCCCCCCCC-
Q 006677 422 STLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLD-----GCISDFGLTPLMNVP- 495 (635)
Q Consensus 422 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~-----~ki~DfGla~~~~~~- 495 (635)
.+++.... ..+++..+..++.||+.||+|||+.+ |+||||||+||+++.++. +||+|||++......
T Consensus 93 ~~~l~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~ 165 (298)
T 1csn_A 93 EDLLDLCG----RKFSVKTVAMAAKQMLARVQSIHEKS---LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPV 165 (298)
T ss_dssp HHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTT
T ss_pred HHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEeccCCCCCCCeEEEEECcccccccccc
Confidence 99997532 24899999999999999999999998 999999999999987776 999999999765432
Q ss_pred ----------CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcccccc
Q 006677 496 ----------ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEV 565 (635)
Q Consensus 496 ----------~~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 565 (635)
....+|+.|+|||++.+..++.++||||||+++|||++|+.||.......... ....+.........
T Consensus 166 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~---~~~~~~~~~~~~~~ 242 (298)
T 1csn_A 166 TKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQ---KYERIGEKKQSTPL 242 (298)
T ss_dssp TCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHH---HHHHHHHHHHHSCH
T ss_pred ccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHH---HHHHHHhhccCccH
Confidence 23347889999999999999999999999999999999999998754332211 11111111100000
Q ss_pred chhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhccCC
Q 006677 566 FDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDS 616 (635)
Q Consensus 566 ~d~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~~~~~ 616 (635)
... . ......+.+++.+||+.+|++||+++++++.|+++.+...
T Consensus 243 --~~~--~---~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~ 286 (298)
T 1csn_A 243 --REL--C---AGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLN 286 (298)
T ss_dssp --HHH--T---TTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred --HHH--H---hhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcC
Confidence 000 0 0123467788889999999999999999999999987654
No 39
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=2.3e-40 Score=358.28 Aligned_cols=247 Identities=25% Similarity=0.407 Sum_probs=202.8
Q ss_pred hccccccCceEEEEEEecCCCeEEEEEeecccCChHHHHHHHHHHHhhcCCCceeceeEEEEeCC-eeEEEEEeccCCCh
Q 006677 343 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKD-EKLLVYDYFASGSL 421 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~-~~~lv~e~~~~g~L 421 (635)
.+.||+|+||.||+|.+. ++.||||+++... ..+.+.+|++++.++ +||||+++++++...+ ..++||||+++|+|
T Consensus 198 ~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~-~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~iv~e~~~~g~L 274 (450)
T 1k9a_A 198 LQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA-TAQAFLAEASVMTQL-RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSL 274 (450)
T ss_dssp EEEEEECSSEEEEEEEET-TEEEEEEEESSCT-TSHHHHHHHHHHHTC-CCTTBCCEEEEEECTTSCEEEEEECCTTCBH
T ss_pred EeeecCcCCeeEEEEEec-CCeEEEEEeCCch-HHHHHHHHHHHHHhc-cCCCEEEEEEEEEcCCCceEEEEEecCCCcH
Confidence 578999999999999986 6799999997654 467899999999999 9999999999988765 78999999999999
Q ss_pred hhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCCC-CCCC
Q 006677 422 STLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA-TPSR 500 (635)
Q Consensus 422 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~~-~~~~ 500 (635)
.++++... ...+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++...... ...+
T Consensus 275 ~~~l~~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~ 348 (450)
T 1k9a_A 275 VDYLRSRG---RSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL 348 (450)
T ss_dssp HHHHHHHC---TTTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTSCEEECCCTTCEECC------CC
T ss_pred HHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHhhEEECCCCCEEEeeCCCcccccccccCCCC
Confidence 99997542 234789999999999999999999998 9999999999999999999999999997654322 2345
Q ss_pred CCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcccChHHH
Q 006677 501 SAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEE 579 (635)
Q Consensus 501 ~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 579 (635)
+..|+|||++.+..++.++|||||||++|||+| |..||......+ +.. . +...... ......
T Consensus 349 ~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~---~~~---~-i~~~~~~----------~~p~~~ 411 (450)
T 1k9a_A 349 PVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD---VVP---R-VEKGYKM----------DAPDGC 411 (450)
T ss_dssp CTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTT---HHH---H-HHTTCCC----------CCCTTC
T ss_pred CcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH---HHH---H-HHcCCCC----------CCCCcC
Confidence 778999999999999999999999999999998 999998654332 111 1 1111111 111122
Q ss_pred HHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhccC
Q 006677 580 MVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 615 (635)
Q Consensus 580 ~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~~~~ 615 (635)
...+.+++.+||+.||++|||+.|+++.|+++....
T Consensus 412 ~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~~ 447 (450)
T 1k9a_A 412 PPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTHE 447 (450)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHhh
Confidence 346778888999999999999999999999988643
No 40
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=1.3e-40 Score=351.13 Aligned_cols=248 Identities=26% Similarity=0.497 Sum_probs=193.0
Q ss_pred hccccccCceEEEEEEec----CCCeEEEEEeecccC--ChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEec
Q 006677 343 AEVLGKGSYGTAYKAVLE----ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYF 416 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~----~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~ 416 (635)
.+.||+|+||.||+|+.. ++..||||+++.... ..+++.+|++++.++ +||||+++++++...+..++||||+
T Consensus 50 ~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~ 128 (373)
T 2qol_A 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF-DHPNIIRLEGVVTKSKPVMIVTEYM 128 (373)
T ss_dssp CEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECSSSSCEEEEECC
T ss_pred eeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEeeCCceEEEEeCC
Confidence 468999999999999865 467799999975432 245788999999999 9999999999999999999999999
Q ss_pred cCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCCC
Q 006677 417 ASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA 496 (635)
Q Consensus 417 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~~ 496 (635)
++|+|.++++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 129 ~~~sL~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 201 (373)
T 2qol_A 129 ENGSLDSFLRKHD----AQFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLGRVLEDDP 201 (373)
T ss_dssp TTCBHHHHHHTTT----TCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCC----------
T ss_pred CCCcHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCcceEEEcCCCCEEECcCccccccccCC
Confidence 9999999997532 34899999999999999999999998 9999999999999999999999999998764322
Q ss_pred C-------CCCCCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccchh
Q 006677 497 T-------PSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDV 568 (635)
Q Consensus 497 ~-------~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 568 (635)
. ..++..|+|||++.+..++.++|||||||++|||++ |+.||...... ..... +.....
T Consensus 202 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~------~~~~~-i~~~~~------ 268 (373)
T 2qol_A 202 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ------DVIKA-VDEGYR------ 268 (373)
T ss_dssp ------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHH------HHHHH-HHTTEE------
T ss_pred ccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHH------HHHHH-HHcCCC------
Confidence 1 123567999999999999999999999999999998 99999754321 11111 111111
Q ss_pred hhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhccC
Q 006677 569 ELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 615 (635)
Q Consensus 569 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~~~~ 615 (635)
.+........+.+++.+||+.+|++||++.|+++.|+.+....
T Consensus 269 ----~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~ 311 (373)
T 2qol_A 269 ----LPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 311 (373)
T ss_dssp ----CCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCG
T ss_pred ----CCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhCc
Confidence 0111123346778888999999999999999999999997643
No 41
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=1.1e-40 Score=364.76 Aligned_cols=248 Identities=26% Similarity=0.404 Sum_probs=206.6
Q ss_pred hccccccCceEEEEEEecC-CCeEEEEEeecccCChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEeccCCCh
Q 006677 343 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSL 421 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 421 (635)
.+.||+|+||.||+|.+.. +..||||+++......+++.+|++++.++ +||||+++++++...+..++||||+++|+|
T Consensus 225 ~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv~E~~~~g~L 303 (495)
T 1opk_A 225 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHPNLVQLLGVCTREPPFYIITEFMTYGNL 303 (495)
T ss_dssp EEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSCEEEEECCTTCBH
T ss_pred eeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccchHHHHHHHHHHHhc-CCCCEeeEEEEEecCCcEEEEEEccCCCCH
Confidence 5789999999999999875 78899999987766778899999999999 999999999999999999999999999999
Q ss_pred hhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCCC-----
Q 006677 422 STLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA----- 496 (635)
Q Consensus 422 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~~----- 496 (635)
.++++... ...+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 304 ~~~l~~~~---~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~ 377 (495)
T 1opk_A 304 LDYLRECN---RQEVSAVVLLYMATQISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 377 (495)
T ss_dssp HHHHHHSC---TTTSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEECCT
T ss_pred HHHHHhcC---cCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChhhEEECCCCcEEEeecccceeccCCceeecC
Confidence 99997533 235899999999999999999999998 9999999999999999999999999998764322
Q ss_pred CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcccC
Q 006677 497 TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQN 575 (635)
Q Consensus 497 ~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 575 (635)
...++..|+|||++.+..++.++|||||||++|||+| |..||......+ +.. .+...... ..
T Consensus 378 ~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~---~~~----~~~~~~~~----------~~ 440 (495)
T 1opk_A 378 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ---VYE----LLEKDYRM----------ER 440 (495)
T ss_dssp TCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG---HHH----HHHTTCCC----------CC
T ss_pred CCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHH---HHH----HHHcCCCC----------CC
Confidence 2234567999999998899999999999999999999 999998654322 111 11111111 11
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhcc
Q 006677 576 IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQS 614 (635)
Q Consensus 576 ~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~~~ 614 (635)
.......+.+++.+||+.||++|||+.|+++.|+.+.+.
T Consensus 441 ~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~~ 479 (495)
T 1opk_A 441 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 479 (495)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCSS
T ss_pred CCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHhc
Confidence 112234567788899999999999999999999988643
No 42
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.2e-40 Score=342.47 Aligned_cols=259 Identities=24% Similarity=0.381 Sum_probs=197.3
Q ss_pred hccccccCceEEEEEEecCCCeEEEEEeecccCChHHHHHHHHHHHhh-cCCCceeceeEEEEeC----CeeEEEEEecc
Q 006677 343 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRV-GQHPNVVPLRAYYYSK----DEKLLVYDYFA 417 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l-~~h~niv~l~~~~~~~----~~~~lv~e~~~ 417 (635)
.+.||+|+||.||+|... ++.||||++.... ...+.+|.+++... .+||||+++++++... ...++||||++
T Consensus 42 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~ 118 (337)
T 3mdy_A 42 VKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTE--EASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHE 118 (337)
T ss_dssp EEEEEEETTEEEEEEEET-TEEEEEEEEEGGG--HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEEEECCCT
T ss_pred EeEeecCCCeEEEEEEEC-CceEEEEEEeccc--cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEEEEeccC
Confidence 578999999999999986 8899999986543 34455565555543 2899999999999887 67899999999
Q ss_pred CCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC-----CCCceecCCCCCCeEEcCCCCeEEeecCCCCCC
Q 006677 418 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMG-----GPKFTHGNIKASNVLINQDLDGCISDFGLTPLM 492 (635)
Q Consensus 418 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~-----~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~ 492 (635)
+|+|.++++.. .+++..+..++.|++.||+|||+.+ .+.|+||||||+|||++.++.+||+|||++...
T Consensus 119 ~g~L~~~l~~~------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a~~~ 192 (337)
T 3mdy_A 119 NGSLYDYLKST------TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKF 192 (337)
T ss_dssp TCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred CCcHHHHhhcc------CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCCceee
Confidence 99999999642 3899999999999999999999980 112999999999999999999999999999655
Q ss_pred CCCC--------CCCCCCcccCcccccCCCCCCc------cchhhHHHHHHHHHhC----------CCCCCCCCCCCCCC
Q 006677 493 NVPA--------TPSRSAGYRAPEVIETRKHSHK------SDVYSFGVLLLEMLTG----------KAPLQSPTRDDMVD 548 (635)
Q Consensus 493 ~~~~--------~~~~~~~y~aPE~~~~~~~~~k------~Dvws~Gvvl~el~tg----------~~p~~~~~~~~~~~ 548 (635)
.... ...+|+.|+|||++.+..++.+ +|||||||++|||+|| ..||......+. .
T Consensus 193 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~-~ 271 (337)
T 3mdy_A 193 ISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDP-S 271 (337)
T ss_dssp C---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSC-C
T ss_pred ccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCCC-c
Confidence 3322 3357889999999988776665 9999999999999999 556654332221 1
Q ss_pred hhHHHHHHhhhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhccCC
Q 006677 549 LPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDS 616 (635)
Q Consensus 549 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~~~~~ 616 (635)
.. ..............+. ...........+.+++.+||+.||++|||+.|++++|+.+.+...
T Consensus 272 ~~-~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~ 334 (337)
T 3mdy_A 272 YE-DMREIVCIKKLRPSFP----NRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQD 334 (337)
T ss_dssp HH-HHHHHHTTSCCCCCCC----GGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTTT
T ss_pred hh-hhHHHHhhhccCcccc----ccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhcc
Confidence 11 1111111111111111 111123566778899999999999999999999999999987653
No 43
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=1.1e-39 Score=332.81 Aligned_cols=254 Identities=22% Similarity=0.320 Sum_probs=201.2
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccCC----hHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEecc
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG----KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 417 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~----~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 417 (635)
.+.||+|+||.||+|... ++..||+|++...... .+.+.+|+.++.++ +||||+++++++..++..++||||++
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~ 94 (294)
T 4eqm_A 16 VDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQL-SHQNIVSMIDVDEEDDCYYLVMEYIE 94 (294)
T ss_dssp EEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTC-CBTTBCCEEEEEECSSEEEEEEECCC
T ss_pred EEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcC-CCCCCceEEEeeeeCCeEEEEEeCCC
Confidence 468999999999999965 5789999998654332 35688899999999 89999999999999999999999999
Q ss_pred CCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCCC-
Q 006677 418 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA- 496 (635)
Q Consensus 418 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~~- 496 (635)
+|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 95 g~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 166 (294)
T 4eqm_A 95 GPTLSEYIESH-----GPLSVDTAINFTNQILDGIKHAHDMR---IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSL 166 (294)
T ss_dssp SCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCSSSTTC-----
T ss_pred CCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEEeCCCccccccccc
Confidence 99999999743 24899999999999999999999998 9999999999999999999999999998764332
Q ss_pred ----CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhc
Q 006677 497 ----TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMR 572 (635)
Q Consensus 497 ----~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 572 (635)
...+|+.|+|||.+.+..++.++||||||+++|||+||+.||..... .............. .....
T Consensus 167 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~------~~~~~~~~~~~~~~----~~~~~ 236 (294)
T 4eqm_A 167 TQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETA------VSIAIKHIQDSVPN----VTTDV 236 (294)
T ss_dssp --------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCH------HHHHHHHHSSCCCC----HHHHS
T ss_pred cccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh------HHHHHHHhhccCCC----cchhc
Confidence 23478999999999999999999999999999999999999975432 11111111111110 00000
Q ss_pred ccChHHHHHHHHHHHHHcccCCCCCCC-CHHHHHHHHHHhhccCCCC
Q 006677 573 FQNIEEEMVQMLQIGMACVAKVPDMRP-NMDEVVRMIEEVRQSDSEN 618 (635)
Q Consensus 573 ~~~~~~~~~~l~~l~~~cl~~~P~~RP-s~~evl~~L~~~~~~~~~~ 618 (635)
.. .....+.+++.+|++.||++|| +++++.+.|+.+.......
T Consensus 237 ~~---~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~~~~ 280 (294)
T 4eqm_A 237 RK---DIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHENRAN 280 (294)
T ss_dssp CT---TSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSSSTT
T ss_pred cc---CCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhccCC
Confidence 11 1234567788899999999999 8999999999887665443
No 44
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=2e-40 Score=341.21 Aligned_cols=253 Identities=26% Similarity=0.367 Sum_probs=194.2
Q ss_pred hccccccCceEEEEEEecCCCeEEEEEeecccCC---hHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEeccCC
Q 006677 343 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASG 419 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g 419 (635)
.+.||+|+||+||+|...+++.||+|++...... ...+.+|++++.++ +||||+++++++.+++..++||||+++
T Consensus 26 ~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~~- 103 (311)
T 3niz_A 26 LEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKEL-HHPNIVSLIDVIHSERCLTLVFEFMEK- 103 (311)
T ss_dssp EEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHC-CCTTBCCEEEEECCSSCEEEEEECCSE-
T ss_pred hhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHc-CCCCEeeeeeEEccCCEEEEEEcCCCC-
Confidence 4679999999999999988999999999754332 35688999999999 999999999999999999999999985
Q ss_pred ChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCC----
Q 006677 420 SLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP---- 495 (635)
Q Consensus 420 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~---- 495 (635)
+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 104 ~l~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~ 176 (311)
T 3niz_A 104 DLKKVLDENK----TGLQDSQIKIYLYQLLRGVAHCHQHR---ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY 176 (311)
T ss_dssp EHHHHHHTCT----TCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC--
T ss_pred CHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCchHhEEECCCCCEEEccCcCceecCCCcccc
Confidence 8888886533 34899999999999999999999998 999999999999999999999999999765432
Q ss_pred CCCCCCCcccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccc---hh---
Q 006677 496 ATPSRSAGYRAPEVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVF---DV--- 568 (635)
Q Consensus 496 ~~~~~~~~y~aPE~~~~-~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---d~--- 568 (635)
....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||......+. ................. +.
T Consensus 177 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~---~~~i~~~~~~~~~~~~~~~~~~~~~ 253 (311)
T 3niz_A 177 THEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQ---LPKIFSILGTPNPREWPQVQELPLW 253 (311)
T ss_dssp -CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTH---HHHHHHHHCCCCTTTSGGGTTSHHH
T ss_pred cCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHH---HHHHHHHHCCCChHHhhhhhccchh
Confidence 23357889999999876 5689999999999999999999999986554332 11121111111000000 00
Q ss_pred ---hhhc--cc----ChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006677 569 ---ELMR--FQ----NIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 569 ---~~~~--~~----~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 607 (635)
.... .. ..+....++.+++.+|++.||++|||++|++++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 301 (311)
T 3niz_A 254 KQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNH 301 (311)
T ss_dssp HSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 0000 00 001122456788889999999999999999873
No 45
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=5.8e-41 Score=354.75 Aligned_cols=247 Identities=25% Similarity=0.383 Sum_probs=201.1
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccC--ChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEeccCC
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASG 419 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g 419 (635)
.+.||+|+||+||+|.+. +++.||||+++.... ..+.+.+|++++.++ +||||+++++++..++..++||||+++|
T Consensus 119 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lv~e~~~~g 197 (377)
T 3cbl_A 119 GEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQY-SHPNIVRLIGVCTQKQPIYIVMELVQGG 197 (377)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTC-CCTTBCCEEEEECSSSSCEEEEECCTTC
T ss_pred eeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEecCCCcEEEEEcCCCC
Confidence 578999999999999986 688999999875432 134688899999999 9999999999999999999999999999
Q ss_pred ChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCCC---
Q 006677 420 SLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA--- 496 (635)
Q Consensus 420 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~~--- 496 (635)
+|.++++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 198 ~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~ 270 (377)
T 3cbl_A 198 DFLTFLRTEG----ARLRVKTLLQMVGDAAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAA 270 (377)
T ss_dssp BHHHHHHHHG----GGCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEEC
T ss_pred CHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCC---cCCcccCHHHEEEcCCCcEEECcCCCceecCCCceee
Confidence 9999997432 24899999999999999999999998 9999999999999999999999999987643321
Q ss_pred ---CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhc
Q 006677 497 ---TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMR 572 (635)
Q Consensus 497 ---~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 572 (635)
...++..|+|||++.+..++.++|||||||++|||+| |..||......+ ....+......
T Consensus 271 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~-------~~~~~~~~~~~--------- 334 (377)
T 3cbl_A 271 SGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQ-------TREFVEKGGRL--------- 334 (377)
T ss_dssp CSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHH-------HHHHHHTTCCC---------
T ss_pred cCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH-------HHHHHHcCCCC---------
Confidence 1123456999999998899999999999999999998 999997543211 11112111110
Q ss_pred ccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhcc
Q 006677 573 FQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQS 614 (635)
Q Consensus 573 ~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~~~ 614 (635)
+........+.+++.+||+.||++|||++|+++.|+++...
T Consensus 335 -~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~ 375 (377)
T 3cbl_A 335 -PCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKR 375 (377)
T ss_dssp -CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhh
Confidence 11112234567888899999999999999999999998754
No 46
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=4.7e-40 Score=330.42 Aligned_cols=247 Identities=25% Similarity=0.417 Sum_probs=206.3
Q ss_pred hccccccCceEEEEEEecCCCeEEEEEeecccCChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEeccCCChh
Q 006677 343 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLS 422 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~ 422 (635)
.+.||+|+||.||+|...+++.||+|++.......+.+.+|++++.++ +||||+++++++..++..++||||+++++|.
T Consensus 13 ~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 91 (267)
T 3t9t_A 13 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKL-SHPKLVQLYGVCLEQAPICLVTEFMEHGCLS 91 (267)
T ss_dssp EEEEEEETTEEEEEEEETTTEEEEEEEECTTTBCHHHHHHHHHHHHTC-CCTTBCCEEEEECSSSSCEEEECCCTTCBHH
T ss_pred eeEecCCCceeEEEEEecCCCeEEEEEccccCCCHHHHHHHHHHHHhC-CCCCEeeEEEEEccCCCeEEEEeCCCCCcHH
Confidence 467999999999999998888999999988776778899999999999 8999999999999999999999999999999
Q ss_pred hhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCC-----CC
Q 006677 423 TLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP-----AT 497 (635)
Q Consensus 423 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~-----~~ 497 (635)
+++.... ..+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||++...... ..
T Consensus 92 ~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~ 164 (267)
T 3t9t_A 92 DYLRTQR----GLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG 164 (267)
T ss_dssp HHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTS
T ss_pred HHHhhCc----ccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCchheEEECCCCCEEEccccccccccccccccccc
Confidence 9997543 34899999999999999999999998 999999999999999999999999998765432 23
Q ss_pred CCCCCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcccCh
Q 006677 498 PSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNI 576 (635)
Q Consensus 498 ~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 576 (635)
..++..|+|||++.+..++.++||||||+++|||++ |+.||..... ......+... .... ..
T Consensus 165 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~------~~~~~~i~~~-~~~~-------~~--- 227 (267)
T 3t9t_A 165 TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN------SEVVEDISTG-FRLY-------KP--- 227 (267)
T ss_dssp TTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH------HHHHHHHHTT-CCCC-------CC---
T ss_pred ccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCH------HHHHHHHhcC-CcCC-------CC---
Confidence 345678999999998889999999999999999999 8999975431 1122222111 1000 00
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhcc
Q 006677 577 EEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQS 614 (635)
Q Consensus 577 ~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~~~ 614 (635)
......+.+++.+||+.+|++||++.|++++|+++.+.
T Consensus 228 ~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (267)
T 3t9t_A 228 RLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 265 (267)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred ccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 11223567788899999999999999999999999864
No 47
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=1.6e-40 Score=334.62 Aligned_cols=245 Identities=25% Similarity=0.393 Sum_probs=189.4
Q ss_pred hccccccCceEEEEEEecCCCeEEEEEeecccC-----ChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEecc
Q 006677 343 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVV-----GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 417 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~-----~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 417 (635)
.+.||+|+||.||+|... ++.||||+++.... ..+.+.+|++++..+ +||||+++++++..++..++||||++
T Consensus 12 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~ 89 (271)
T 3dtc_A 12 EEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAML-KHPNIIALRGVCLKEPNLCLVMEFAR 89 (271)
T ss_dssp EEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHC-CCTTBCCEEEEECCC--CEEEEECCT
T ss_pred eeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhc-CCCCEeeEEEEEecCCceEEEEEcCC
Confidence 468999999999999976 78899999875432 246788999999999 89999999999999999999999999
Q ss_pred CCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcC--------CCCeEEeecCCC
Q 006677 418 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQ--------DLDGCISDFGLT 489 (635)
Q Consensus 418 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~--------~~~~ki~DfGla 489 (635)
+++|.+++.. ..+++..+..++.|++.||+|||+.+..+|+||||||+||+++. ++.+||+|||++
T Consensus 90 ~~~L~~~~~~------~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~ 163 (271)
T 3dtc_A 90 GGPLNRVLSG------KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLA 163 (271)
T ss_dssp TEEHHHHHTS------SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC-
T ss_pred CCCHHHHhhc------CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCcc
Confidence 9999999863 24899999999999999999999987556899999999999986 778999999999
Q ss_pred CCCCCCC--CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccch
Q 006677 490 PLMNVPA--TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFD 567 (635)
Q Consensus 490 ~~~~~~~--~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 567 (635)
....... ...+++.|+|||.+.+..++.++||||||+++|||++|+.||...... ..............
T Consensus 164 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~------~~~~~~~~~~~~~~--- 234 (271)
T 3dtc_A 164 REWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGL------AVAYGVAMNKLALP--- 234 (271)
T ss_dssp ------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHH------HHHHHHHTSCCCCC---
T ss_pred cccccccccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH------HHHHhhhcCCCCCC---
Confidence 7654432 345788999999999989999999999999999999999999754311 11111111111110
Q ss_pred hhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHh
Q 006677 568 VELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEV 611 (635)
Q Consensus 568 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~ 611 (635)
........+.+++.+||+.+|++|||+.|++++|+++
T Consensus 235 -------~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 235 -------IPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp -------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred -------CCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 1112234577888899999999999999999999864
No 48
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=8.2e-40 Score=346.25 Aligned_cols=245 Identities=19% Similarity=0.293 Sum_probs=194.8
Q ss_pred hccccccCceEEEEEEecC-CCeEEEEEeecccCC----hHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEecc
Q 006677 343 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVVVG----KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 417 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~~~----~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 417 (635)
.++||+|+||+||+|+... ++.||+|++++.... .+.+.+|..++.++.+||||+++++++.+.+..++||||++
T Consensus 57 ~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV~E~~~ 136 (396)
T 4dc2_A 57 LRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVN 136 (396)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEEEEcCC
Confidence 5789999999999999764 678999999865332 24578899999888789999999999999999999999999
Q ss_pred CCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCC---
Q 006677 418 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV--- 494 (635)
Q Consensus 418 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~--- 494 (635)
+|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 137 gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~ 208 (396)
T 4dc2_A 137 GGDLMFHMQRQ-----RKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD 208 (396)
T ss_dssp TCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTC
T ss_pred CCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---EEeccCCHHHEEECCCCCEEEeecceeeecccCCC
Confidence 99999999743 24899999999999999999999998 99999999999999999999999999976322
Q ss_pred -CCCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCC--CChhHHHHHHhhhccccccchhhhh
Q 006677 495 -PATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDM--VDLPRWVQSVVREEWTAEVFDVELM 571 (635)
Q Consensus 495 -~~~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~d~~~~ 571 (635)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||......+. .....+....+..... .
T Consensus 209 ~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~--------~ 280 (396)
T 4dc2_A 209 TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI--------R 280 (396)
T ss_dssp CBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCC--------C
T ss_pred ccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhcccc--------C
Confidence 2345689999999999999999999999999999999999999975432221 1111222211111110 0
Q ss_pred cccChHHHHHHHHHHHHHcccCCCCCCCCH------HHHHH
Q 006677 572 RFQNIEEEMVQMLQIGMACVAKVPDMRPNM------DEVVR 606 (635)
Q Consensus 572 ~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~------~evl~ 606 (635)
.. ......+.+++.+||+.||++||++ +|+++
T Consensus 281 ~p---~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~ 318 (396)
T 4dc2_A 281 IP---RSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQG 318 (396)
T ss_dssp CC---TTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHH
T ss_pred CC---CcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhc
Confidence 01 1122356677889999999999996 56665
No 49
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.5e-40 Score=344.86 Aligned_cols=239 Identities=20% Similarity=0.313 Sum_probs=191.7
Q ss_pred hccccccCceEEEEEEe-cCCCeEEEEEeecccC--ChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEeccCC
Q 006677 343 AEVLGKGSYGTAYKAVL-EESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASG 419 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g 419 (635)
.+.||+|+||+||+|.. .+++.||||++..... ....+.+|+++++++ +||||+++++++...+..++||||+++|
T Consensus 15 ~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l-~hpnIv~l~~~~~~~~~~~lv~E~~~gg 93 (347)
T 3zgw_A 15 HETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNL-RHQHICQLYHVLETANKIFMVLEYCPGG 93 (347)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEEEECCTTC
T ss_pred EEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhC-CCCCEeeEEEEEEeCCEEEEEEeCCCCC
Confidence 46899999999999996 4688999999976543 345788999999999 8999999999999999999999999999
Q ss_pred ChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCC----
Q 006677 420 SLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP---- 495 (635)
Q Consensus 420 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~---- 495 (635)
+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+||++++++.+||+|||++......
T Consensus 94 ~L~~~l~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~ 165 (347)
T 3zgw_A 94 ELFDYIISQ-----DRLSEEETRVVFRQIVSAVAYVHSQG---YAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYH 165 (347)
T ss_dssp BHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBC--------
T ss_pred CHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCccHHHEEEcCCCCEEEEeccCcccccCCCCcc
Confidence 999999643 24899999999999999999999998 999999999999999999999999998765432
Q ss_pred -CCCCCCCcccCcccccCCCC-CCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcc
Q 006677 496 -ATPSRSAGYRAPEVIETRKH-SHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRF 573 (635)
Q Consensus 496 -~~~~~~~~y~aPE~~~~~~~-~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 573 (635)
....||+.|+|||++.+..+ +.++||||+||++|||++|..||...+ .......+...... ..
T Consensus 166 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~------~~~~~~~i~~~~~~---------~p 230 (347)
T 3zgw_A 166 LQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDN------VMALYKKIMRGKYD---------VP 230 (347)
T ss_dssp ------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHTCCC---------CC
T ss_pred ccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCC------HHHHHHHHHcCCCC---------CC
Confidence 23457899999999988775 899999999999999999999997532 22222232222211 00
Q ss_pred cChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 006677 574 QNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMI 608 (635)
Q Consensus 574 ~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L 608 (635)
. .....+.+++.+||+.||++|||++|++++-
T Consensus 231 ~---~~s~~~~~li~~~L~~dP~~Rps~~eil~hp 262 (347)
T 3zgw_A 231 K---WLSPSSILLLQQMLQVDPKKRISMKNLLNHP 262 (347)
T ss_dssp T---TCCHHHHHHHHHHTCSSGGGSCCHHHHHTCH
T ss_pred C---CCCHHHHHHHHHHcccCHhHCcCHHHHhcCc
Confidence 1 1123456788899999999999999999853
No 50
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=1e-39 Score=342.21 Aligned_cols=241 Identities=21% Similarity=0.354 Sum_probs=197.1
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccC-------ChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEE
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV-------GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYD 414 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-------~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e 414 (635)
.+.||+|+||+||+|... +++.||+|+++.... ..+.+.+|+.++.++ +||||+++++++.+.+..++|||
T Consensus 17 ~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~lv~e 95 (361)
T 2yab_A 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQV-LHPNIITLHDVYENRTDVVLILE 95 (361)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEEEE
T ss_pred eeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhC-CCcCCCcEEEEEEeCCEEEEEEE
Confidence 468999999999999976 578999999976532 246789999999999 89999999999999999999999
Q ss_pred eccCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCC----CeEEeecCCCC
Q 006677 415 YFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDL----DGCISDFGLTP 490 (635)
Q Consensus 415 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~----~~ki~DfGla~ 490 (635)
|+++|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++ .+||+|||++.
T Consensus 96 ~~~gg~L~~~l~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~~~~vkl~DFG~a~ 167 (361)
T 2yab_A 96 LVSGGELFDFLAQK-----ESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH 167 (361)
T ss_dssp CCCSCBHHHHHTTC-----SCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCTTSSSCCEEECCCSSCE
T ss_pred cCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEeCCCCCccCEEEEecCCce
Confidence 99999999999642 35899999999999999999999998 99999999999998877 79999999997
Q ss_pred CCCCC---CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccch
Q 006677 491 LMNVP---ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFD 567 (635)
Q Consensus 491 ~~~~~---~~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 567 (635)
..... ....||+.|+|||++.+..++.++|||||||++|||++|..||.+.+.. .....+....+. ++
T Consensus 168 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~------~~~~~i~~~~~~---~~ 238 (361)
T 2yab_A 168 EIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ------ETLANITAVSYD---FD 238 (361)
T ss_dssp ECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH------HHHHHHHTTCCC---CC
T ss_pred EcCCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHhcCCC---CC
Confidence 76543 2345899999999999999999999999999999999999999764321 122222221111 11
Q ss_pred hhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006677 568 VELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVR 606 (635)
Q Consensus 568 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 606 (635)
... ... ....+.+++.+|+..||++|||+.|+++
T Consensus 239 ~~~--~~~---~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 239 EEF--FSQ---TSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp HHH--HTT---SCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred chh--ccC---CCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 110 111 1234667788999999999999999986
No 51
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=2.2e-39 Score=334.68 Aligned_cols=264 Identities=17% Similarity=0.253 Sum_probs=206.6
Q ss_pred hccccccCceEEEEEEecC-CCeEEEEEeeccc--CChHHHHHHHHHHHhhcCCCceeceeEEEEeCC--eeEEEEEecc
Q 006677 343 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVV--VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKD--EKLLVYDYFA 417 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~--~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~--~~~lv~e~~~ 417 (635)
.++||+|+||+||+|.... ++.||||++.... ...+.+.+|++++.++ +||||+++++++...+ ..++||||++
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~lv~e~~~ 92 (319)
T 4euu_A 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKL-NHKNIVKLFAIEEETTTRHKVLIMEFCP 92 (319)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHC-CCTTBCCEEEEEECTTTCCEEEEEECCT
T ss_pred EEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhc-CCCCcceEEEEeecCCCceEEEEEeCCC
Confidence 4689999999999999764 7899999997543 3456788999999999 8999999999998765 6799999999
Q ss_pred CCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEE----cCCCCeEEeecCCCCCCC
Q 006677 418 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLI----NQDLDGCISDFGLTPLMN 493 (635)
Q Consensus 418 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll----~~~~~~ki~DfGla~~~~ 493 (635)
+|+|.+++..... ...+++..+..++.|++.||+|||+.+ |+||||||+|||+ +.++.+||+|||+++...
T Consensus 93 ~~~L~~~l~~~~~--~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~ 167 (319)
T 4euu_A 93 CGSLYTVLEEPSN--AYGLPESEFLIVLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE 167 (319)
T ss_dssp TCBHHHHHHSGGG--TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEECTTSCEEEEECCCTTCEECC
T ss_pred CCCHHHHHHHhcc--ccCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEEeccCCCCceEEEccCCCceecC
Confidence 9999999976432 234899999999999999999999998 9999999999999 788889999999997765
Q ss_pred CCC---CCCCCCcccCccccc--------CCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccc
Q 006677 494 VPA---TPSRSAGYRAPEVIE--------TRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWT 562 (635)
Q Consensus 494 ~~~---~~~~~~~y~aPE~~~--------~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (635)
... ...+++.|+|||++. +..++.++|||||||++|||++|+.||........ .......+......
T Consensus 168 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~--~~~~~~~~~~~~p~ 245 (319)
T 4euu_A 168 DDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRR--NKEVMYKIITGKPS 245 (319)
T ss_dssp TTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGG--CHHHHHHHHHHCCT
T ss_pred CCCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccch--hHHHHHHHhcCCCc
Confidence 433 345788999999986 56789999999999999999999999975432221 12223333322211
Q ss_pred cc---c---------chhhhh-cccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhcc
Q 006677 563 AE---V---------FDVELM-RFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQS 614 (635)
Q Consensus 563 ~~---~---------~d~~~~-~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~~~ 614 (635)
.. . +..... ...........+.+++.+||+.||++|||++|++++..+....
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~~~ 310 (319)
T 4euu_A 246 GAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR 310 (319)
T ss_dssp TCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHTC-
T ss_pred ccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHhhc
Confidence 00 0 000000 1122345566788899999999999999999999999876543
No 52
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=2.8e-40 Score=357.74 Aligned_cols=248 Identities=25% Similarity=0.427 Sum_probs=201.7
Q ss_pred hccccccCceEEEEEEecCCCeEEEEEeecccCChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEeccCCChh
Q 006677 343 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLS 422 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~ 422 (635)
.+.||+|+||+||+|.+.++..||||+++......+++.+|+++++++ +||||+++++++.. +..++||||+++|+|.
T Consensus 189 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~-~~~~iv~e~~~~gsL~ 266 (452)
T 1fmk_A 189 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAVVSE-EPIYIVTEYMSKGSLL 266 (452)
T ss_dssp EEEEEECSSCEEEEEEETTTEEEEEEECCTTSSCHHHHHHHHHHHHHC-CCTTBCCEEEEECS-SSCEEEECCCTTCBHH
T ss_pred eeeecCCCCeEEEEEEECCCceEEEEEeccCCCCHHHHHHHHHHHHhC-CCCCEeeEEEEEcC-CceEEEehhhcCCCHH
Confidence 568999999999999998888899999987666778899999999999 99999999999865 6789999999999999
Q ss_pred hhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCCC-----C
Q 006677 423 TLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA-----T 497 (635)
Q Consensus 423 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~~-----~ 497 (635)
++++... ...+++..+..++.||+.||+|||+++ |+||||||+|||+++++.+||+|||+++...... .
T Consensus 267 ~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~ 340 (452)
T 1fmk_A 267 DFLKGET---GKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 340 (452)
T ss_dssp HHHSHHH---HTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCCTTC------------
T ss_pred HHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChhhEEECCCCCEEECCCccceecCCCceecccC
Confidence 9997432 134899999999999999999999998 9999999999999999999999999998764322 2
Q ss_pred CCCCCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcccCh
Q 006677 498 PSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNI 576 (635)
Q Consensus 498 ~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 576 (635)
..++..|+|||++.+..++.++|||||||++|||+| |+.||.+.... .....+ ...... +..
T Consensus 341 ~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~------~~~~~i-~~~~~~----------~~~ 403 (452)
T 1fmk_A 341 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR------EVLDQV-ERGYRM----------PCP 403 (452)
T ss_dssp --CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH------HHHHHH-HTTCCC----------CCC
T ss_pred CcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHH------HHHHHH-HcCCCC----------CCC
Confidence 234667999999998899999999999999999999 99999754321 111111 111110 111
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhccC
Q 006677 577 EEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 615 (635)
Q Consensus 577 ~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~~~~ 615 (635)
......+.+++.+||+.+|++|||++++++.|+++....
T Consensus 404 ~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~ 442 (452)
T 1fmk_A 404 PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 442 (452)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCS
T ss_pred CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccC
Confidence 123346778888999999999999999999999987554
No 53
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.5e-40 Score=340.82 Aligned_cols=243 Identities=20% Similarity=0.320 Sum_probs=198.7
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccCChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEeccCCCh
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSL 421 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 421 (635)
.+.||+|+||+||+|... ++..||+|.+.........+.+|++++.++ +||||+++++++.+.+..++||||+++|+|
T Consensus 10 ~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~lv~e~~~g~~L 88 (321)
T 1tki_A 10 AEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIA-RHRNILHLHESFESMEELVMIFEFISGLDI 88 (321)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHS-CCTTBCCEEEEEEETTEEEEEECCCCCCBH
T ss_pred eeEEecCCCeEEEEEEECCCCcEEEEEEEecCcccHHHHHHHHHHHHhC-CCCCCCeEeEEEecCCEEEEEEEeCCCCCH
Confidence 467999999999999976 467899999876544556788999999999 999999999999999999999999999999
Q ss_pred hhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcC--CCCeEEeecCCCCCCCCCC---
Q 006677 422 STLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQ--DLDGCISDFGLTPLMNVPA--- 496 (635)
Q Consensus 422 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~--~~~~ki~DfGla~~~~~~~--- 496 (635)
.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++. ++.+||+|||++.......
T Consensus 89 ~~~l~~~~----~~~~~~~~~~i~~qi~~al~~lH~~g---ivH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~ 161 (321)
T 1tki_A 89 FERINTSA----FELNEREIVSYVHQVCEALQFLHSHN---IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFR 161 (321)
T ss_dssp HHHHTSSS----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEEE
T ss_pred HHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCC---CCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCccc
Confidence 99997432 34899999999999999999999998 999999999999987 7899999999998765433
Q ss_pred CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcccCh
Q 006677 497 TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNI 576 (635)
Q Consensus 497 ~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 576 (635)
...+++.|+|||++.+..++.++|||||||++|||++|..||..... ......+....... +.. ...
T Consensus 162 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~------~~~~~~i~~~~~~~---~~~--~~~-- 228 (321)
T 1tki_A 162 LLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETN------QQIIENIMNAEYTF---DEE--AFK-- 228 (321)
T ss_dssp EEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSH------HHHHHHHHHTCCCC---CHH--HHT--
T ss_pred cccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCH------HHHHHHHHcCCCCC---Chh--hhc--
Confidence 23478899999999998899999999999999999999999975432 12222222222110 000 011
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006677 577 EEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 577 ~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 607 (635)
.....+.+++.+|+..||++|||+.|++++
T Consensus 229 -~~s~~~~~li~~~L~~dp~~Rpt~~e~l~h 258 (321)
T 1tki_A 229 -EISIEAMDFVDRLLVKERKSRMTASEALQH 258 (321)
T ss_dssp -TSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred -cCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 123456778889999999999999999984
No 54
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=2.2e-39 Score=336.68 Aligned_cols=238 Identities=21% Similarity=0.275 Sum_probs=196.2
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeeccc----CChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEecc
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVV----VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 417 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 417 (635)
.+.||+|+||+||+|... +++.||+|++++.. .....+.+|+.++..+ +||||+++++++...+..++||||++
T Consensus 10 ~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~~~~lv~E~~~ 88 (337)
T 1o6l_A 10 LKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT-RHPFLTALKYAFQTHDRLCFVMEYAN 88 (337)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSC-CCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred EEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhC-CCCcCcceEEEEEeCCEEEEEEeCCC
Confidence 468999999999999976 58899999997642 2356788899999998 89999999999999999999999999
Q ss_pred CCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCC--
Q 006677 418 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP-- 495 (635)
Q Consensus 418 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~-- 495 (635)
+|+|.+++... ..+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 89 gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~ 160 (337)
T 1o6l_A 89 GGELFFHLSRE-----RVFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA 160 (337)
T ss_dssp TCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTC
T ss_pred CCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCcCCHHHEEECCCCCEEEeeccchhhcccCCC
Confidence 99999998743 24899999999999999999999998 999999999999999999999999999764322
Q ss_pred --CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcc
Q 006677 496 --ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRF 573 (635)
Q Consensus 496 --~~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 573 (635)
....||+.|+|||++.+..++.++|||||||++|||++|+.||...+. ......+...... ..
T Consensus 161 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~------~~~~~~i~~~~~~---------~p 225 (337)
T 1o6l_A 161 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH------ERLFELILMEEIR---------FP 225 (337)
T ss_dssp CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHCCCC---------CC
T ss_pred cccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCH------HHHHHHHHcCCCC---------CC
Confidence 234578999999999999999999999999999999999999975431 1222222222110 00
Q ss_pred cChHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 006677 574 QNIEEEMVQMLQIGMACVAKVPDMRP-----NMDEVVRM 607 (635)
Q Consensus 574 ~~~~~~~~~l~~l~~~cl~~~P~~RP-----s~~evl~~ 607 (635)
. .....+.+++.+||+.||++|| +++|++++
T Consensus 226 ~---~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 226 R---TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp T---TSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred C---CCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence 1 1223566777899999999999 89999875
No 55
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=9.6e-41 Score=350.66 Aligned_cols=254 Identities=27% Similarity=0.374 Sum_probs=202.2
Q ss_pred hccccccCceEEEEEEec------CCCeEEEEEeecccC--ChHHHHHHHHHHHhhcCCCceeceeEEEEeCCe-eEEEE
Q 006677 343 AEVLGKGSYGTAYKAVLE------ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDE-KLLVY 413 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~------~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~-~~lv~ 413 (635)
.+.||+|+||.||+|.+. +++.||||+++.... ..+.+.+|++++.++.+||||+++++++...+. .++||
T Consensus 27 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~~iv~ 106 (359)
T 3vhe_A 27 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIV 106 (359)
T ss_dssp EEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCCEEEE
T ss_pred ceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCCceEEEE
Confidence 578999999999999842 357899999976433 235689999999999889999999999987654 89999
Q ss_pred EeccCCChhhhccCCCCCC-------------------------------------------------------------
Q 006677 414 DYFASGSLSTLLHGNRGAG------------------------------------------------------------- 432 (635)
Q Consensus 414 e~~~~g~L~~~l~~~~~~~------------------------------------------------------------- 432 (635)
||+++|+|.++++......
T Consensus 107 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (359)
T 3vhe_A 107 EFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLY 186 (359)
T ss_dssp ECCTTEEHHHHHHTTTTSBCSCC------------------------------------------------------CTT
T ss_pred EecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhcccccchh
Confidence 9999999999997653210
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCCC------CCCCCCcccC
Q 006677 433 RTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA------TPSRSAGYRA 506 (635)
Q Consensus 433 ~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~~------~~~~~~~y~a 506 (635)
...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...... ...+|+.|+|
T Consensus 187 ~~~l~~~~~~~~~~ql~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~a 263 (359)
T 3vhe_A 187 KDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMA 263 (359)
T ss_dssp TTCBCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEECGGGCC
T ss_pred ccccCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCCCceeEC
Confidence 122899999999999999999999998 9999999999999999999999999998654322 2235678999
Q ss_pred cccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcccChHHHHHHHHH
Q 006677 507 PEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQ 585 (635)
Q Consensus 507 PE~~~~~~~~~k~Dvws~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~ 585 (635)
||++.+..++.++|||||||++|||+| |..||......+ .............. .......+.+
T Consensus 264 PE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~------~~~~~~~~~~~~~~----------~~~~~~~l~~ 327 (359)
T 3vhe_A 264 PETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE------EFCRRLKEGTRMRA----------PDYTTPEMYQ 327 (359)
T ss_dssp HHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH------HHHHHHHHTCCCCC----------CTTCCHHHHH
T ss_pred hhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhH------HHHHHHHcCCCCCC----------CCCCCHHHHH
Confidence 999999999999999999999999999 999997654321 11111111111110 0112235677
Q ss_pred HHHHcccCCCCCCCCHHHHHHHHHHhhccC
Q 006677 586 IGMACVAKVPDMRPNMDEVVRMIEEVRQSD 615 (635)
Q Consensus 586 l~~~cl~~~P~~RPs~~evl~~L~~~~~~~ 615 (635)
++.+||+.||++|||++|++++|+++.+..
T Consensus 328 li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 357 (359)
T 3vhe_A 328 TMLDCWHGEPSQRPTFSELVEHLGNLLQAN 357 (359)
T ss_dssp HHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHccCChhhCCCHHHHHHHHHHHHHHh
Confidence 888999999999999999999999988643
No 56
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=1.2e-39 Score=334.83 Aligned_cols=252 Identities=28% Similarity=0.441 Sum_probs=197.0
Q ss_pred hhccccccCceEEEEEEecCCCeEEEEEeecccCC---hHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEeccC
Q 006677 342 SAEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS 418 (635)
Q Consensus 342 ~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~ 418 (635)
..+.||+|+||+||+|... ..+++|+++..... .+.+.+|++++.++ +||||+++++++. .+..++||||+++
T Consensus 40 ~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~-~~~~~lv~e~~~~ 115 (307)
T 3lb7_A 40 LSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKT-RHVNILLFMGYMT-KDNLAIVTQWCEG 115 (307)
T ss_dssp EEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEC-SSSCEEEEECCSS
T ss_pred EEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEc-cCcEEEEEecCCC
Confidence 3578999999999999865 46899988764433 35688899999999 8999999999864 5668999999999
Q ss_pred CChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCC----
Q 006677 419 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV---- 494 (635)
Q Consensus 419 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~---- 494 (635)
|+|.+++.... ..+++..+..++.||+.||+|||+.+ |+||||||+|||+++++.+||+|||++.....
T Consensus 116 ~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~~ 188 (307)
T 3lb7_A 116 SSLYKHLHVQE----TKFQMFQLIDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS 188 (307)
T ss_dssp CBHHHHHHTSC----CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCSSSEEECTTSCEEECCCCSSCC-------
T ss_pred CcHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHhCC---EeeCCCChhhEEEcCCCCEEEccCCCceeccccccc
Confidence 99999997433 34899999999999999999999998 99999999999999999999999999975432
Q ss_pred --CCCCCCCCcccCccccc---CCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhh
Q 006677 495 --PATPSRSAGYRAPEVIE---TRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVE 569 (635)
Q Consensus 495 --~~~~~~~~~y~aPE~~~---~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 569 (635)
.....+|+.|+|||++. +..++.++|||||||++|||++|+.||......+ .................
T Consensus 189 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~------~~~~~~~~~~~~~~~~~- 261 (307)
T 3lb7_A 189 QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRD------QIIFMVGRGYASPDLSK- 261 (307)
T ss_dssp -----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH------HHHHHHHHTCCCCCSTT-
T ss_pred ccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHH------HHHHHHhcCCCCcchhh-
Confidence 12345789999999986 5668899999999999999999999997543211 11111211111110000
Q ss_pred hhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhccCC
Q 006677 570 LMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDS 616 (635)
Q Consensus 570 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~~~~~ 616 (635)
.. ......+.+++.+||+.+|++||++.|++++|+.+....+
T Consensus 262 --~~---~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~~p 303 (307)
T 3lb7_A 262 --LY---KNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLP 303 (307)
T ss_dssp --SC---SSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTTCC
T ss_pred --hh---cCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhhcc
Confidence 00 1223456778889999999999999999999999987654
No 57
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=1.5e-40 Score=339.37 Aligned_cols=255 Identities=24% Similarity=0.395 Sum_probs=196.9
Q ss_pred hccccccCceEEEEEEe-----cCCCeEEEEEeecccC-ChHHHHHHHHHHHhhcCCCceeceeEEEEeC--CeeEEEEE
Q 006677 343 AEVLGKGSYGTAYKAVL-----EESTTVVVKRLKEVVV-GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSK--DEKLLVYD 414 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~-----~~~~~vavK~l~~~~~-~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~--~~~~lv~e 414 (635)
.+.||+|+||+||+|++ .+++.||||++..... ..+.+.+|++++.++ +||||+++++++... ...++|||
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~lv~e 93 (295)
T 3ugc_A 15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHDNIVKYKGVCYSAGRRNLKLIME 93 (295)
T ss_dssp EEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEECHHHHTSCEEEEE
T ss_pred hheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEecCCCCceEEEEE
Confidence 46899999999999984 2578899999875432 245788999999999 899999999998654 45899999
Q ss_pred eccCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCC
Q 006677 415 YFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV 494 (635)
Q Consensus 415 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~ 494 (635)
|+++|+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.....
T Consensus 94 ~~~~~~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 166 (295)
T 3ugc_A 94 YLPYGSLRDYLQKHK----ERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQ 166 (295)
T ss_dssp CCTTCBHHHHHHHCG----GGCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCCSCC----
T ss_pred eCCCCCHHHHHHhcc----cccCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHhhEEEcCCCeEEEccCcccccccC
Confidence 999999999997543 24899999999999999999999998 99999999999999999999999999987643
Q ss_pred CC-------CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCC--------CCC-ChhHHHHHHhh
Q 006677 495 PA-------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRD--------DMV-DLPRWVQSVVR 558 (635)
Q Consensus 495 ~~-------~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~--------~~~-~~~~~~~~~~~ 558 (635)
.. ...++..|+|||++.+..++.++||||||+++|||+||..|+...... ... ...........
T Consensus 167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (295)
T 3ugc_A 167 DKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLK 246 (295)
T ss_dssp ---------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHH
T ss_pred CcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHHh
Confidence 32 123455699999999999999999999999999999999998643110 000 00001111111
Q ss_pred hccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhccC
Q 006677 559 EEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 615 (635)
Q Consensus 559 ~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~~~~ 615 (635)
... ..+........+.+++.+||+.||++|||++|+++.|+++.+.-
T Consensus 247 ~~~----------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~l 293 (295)
T 3ugc_A 247 NNG----------RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 293 (295)
T ss_dssp TTC----------CCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred ccC----------cCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhc
Confidence 110 11111223356778888999999999999999999999998653
No 58
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=4.8e-40 Score=340.49 Aligned_cols=247 Identities=21% Similarity=0.351 Sum_probs=180.5
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccCChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEeccCCCh
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSL 421 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 421 (635)
.+.||+|+||+||+|... +++.||||++... ....+.+|+.++.++.+||||+++++++.++...++||||+++|+|
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 93 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR--MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGEL 93 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG--GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh--hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcH
Confidence 467999999999999975 5788999999754 3567888999999996699999999999999999999999999999
Q ss_pred hhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCC---CeEEeecCCCCCCCCC---
Q 006677 422 STLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDL---DGCISDFGLTPLMNVP--- 495 (635)
Q Consensus 422 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~---~~ki~DfGla~~~~~~--- 495 (635)
.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++ .+||+|||+++.....
T Consensus 94 ~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~ 165 (325)
T 3kn6_A 94 FERIKKK-----KHFSETEASYIMRKLVSAVSHMHDVG---VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQP 165 (325)
T ss_dssp HHHHHHC-----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEC----CEEEECCCTTCEECCC----
T ss_pred HHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---CeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCc
Confidence 9999753 34999999999999999999999998 99999999999998765 8999999999765433
Q ss_pred -CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCC-CChhHHHHHHhhhccccccchhhhhcc
Q 006677 496 -ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDM-VDLPRWVQSVVREEWTAEVFDVELMRF 573 (635)
Q Consensus 496 -~~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~~~~~ 573 (635)
....+|+.|+|||++.+..++.++|||||||++|||++|+.||........ .........+........ ..
T Consensus 166 ~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~----- 238 (325)
T 3kn6_A 166 LKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFE--GE----- 238 (325)
T ss_dssp ------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCC--SH-----
T ss_pred ccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCC--cc-----
Confidence 234568899999999999999999999999999999999999986543322 222222222222211100 00
Q ss_pred cChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006677 574 QNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 574 ~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 607 (635)
........+.+++.+|++.||++|||++|++++
T Consensus 239 -~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 271 (325)
T 3kn6_A 239 -AWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYN 271 (325)
T ss_dssp -HHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTC
T ss_pred -cccCCCHHHHHHHHHHCCCChhHCCCHHHHhcC
Confidence 001223456778889999999999999999764
No 59
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=5.9e-40 Score=340.00 Aligned_cols=243 Identities=23% Similarity=0.380 Sum_probs=197.5
Q ss_pred hhccccccCceEEEEEEec-CCCeEEEEEeecccC-------ChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEE
Q 006677 342 SAEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV-------GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVY 413 (635)
Q Consensus 342 ~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-------~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~ 413 (635)
..+.||+|+||.||+|... ++..||+|++..... ..+.+.+|++++.++ +||||+++++++...+..++||
T Consensus 15 ~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~ 93 (326)
T 2y0a_A 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI-QHPNVITLHEVYENKTDVILIL 93 (326)
T ss_dssp EEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEE
T ss_pred eceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhC-CCCCCCcEEEEEEeCCEEEEEE
Confidence 3578999999999999976 578999999976532 356789999999999 8999999999999999999999
Q ss_pred EeccCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCC----CeEEeecCCC
Q 006677 414 DYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDL----DGCISDFGLT 489 (635)
Q Consensus 414 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~----~~ki~DfGla 489 (635)
||+++|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+||+++.++ .+||+|||++
T Consensus 94 e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a 165 (326)
T 2y0a_A 94 ELVAGGELFDFLAEK-----ESLTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165 (326)
T ss_dssp ECCCSCBHHHHHTTS-----SCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESCSSSSSCCEEECCCTTC
T ss_pred EcCCCCCHHHHHHhc-----CCcCHHHHHHHHHHHHHHHHHHHHCC---eEcCCCCHHHEEEecCCCCCCCEEEEECCCC
Confidence 999999999999642 34899999999999999999999998 99999999999999887 8999999999
Q ss_pred CCCCCC---CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccc
Q 006677 490 PLMNVP---ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVF 566 (635)
Q Consensus 490 ~~~~~~---~~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 566 (635)
...... ....+|+.|+|||++.+..++.++|||||||++|||++|..||...... .....+...... +
T Consensus 166 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~------~~~~~~~~~~~~---~ 236 (326)
T 2y0a_A 166 HKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ------ETLANVSAVNYE---F 236 (326)
T ss_dssp EECCTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH------HHHHHHHHTCCC---C
T ss_pred eECCCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHH------HHHHHHHhcCCC---c
Confidence 766432 2345889999999999999999999999999999999999999754321 111111111110 0
Q ss_pred hhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006677 567 DVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 567 d~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 607 (635)
.... .. .....+.+++.+||+.||++|||+.|++++
T Consensus 237 ~~~~--~~---~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 272 (326)
T 2y0a_A 237 EDEY--FS---NTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272 (326)
T ss_dssp CHHH--HT---TSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred Cccc--cc---cCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0000 01 112356678889999999999999999873
No 60
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=1.1e-40 Score=345.82 Aligned_cols=246 Identities=22% Similarity=0.377 Sum_probs=194.2
Q ss_pred hccccccCceEEEEEEecC-CCe----EEEEEeeccc--CChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEe
Q 006677 343 AEVLGKGSYGTAYKAVLEE-STT----VVVKRLKEVV--VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDY 415 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~~-~~~----vavK~l~~~~--~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~ 415 (635)
.++||+|+||+||+|.+.. ++. ||+|.+.... ...+.+.+|++++.++ +||||+++++++... ..++|+||
T Consensus 20 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~-~~~~v~e~ 97 (327)
T 3poz_A 20 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-DNPHVCRLLGICLTS-TVQLITQL 97 (327)
T ss_dssp EEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHC-CBTTBCCEEEEEESS-SEEEEEEC
T ss_pred ceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhC-CCCCEeEEEEEEecC-CeEEEEEe
Confidence 4689999999999999643 333 5788775443 3457899999999999 999999999999875 47899999
Q ss_pred ccCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCC
Q 006677 416 FASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP 495 (635)
Q Consensus 416 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~ 495 (635)
+++|+|.+++.... ..+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 98 ~~~g~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~ 170 (327)
T 3poz_A 98 MPFGCLLDYVREHK----DNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 170 (327)
T ss_dssp CTTCBHHHHHHHST----TSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEETTEEEECCTTHHHHHTTT
T ss_pred cCCCcHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCChheEEECCCCCEEEccCcceeEccCC
Confidence 99999999997543 34899999999999999999999998 999999999999999999999999998765432
Q ss_pred C------CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccchh
Q 006677 496 A------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDV 568 (635)
Q Consensus 496 ~------~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 568 (635)
. ...+++.|+|||++.+..++.++|||||||++|||+| |+.||......+. . ..+.....
T Consensus 171 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~---~----~~~~~~~~------ 237 (327)
T 3poz_A 171 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI---S----SILEKGER------ 237 (327)
T ss_dssp CC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH---H----HHHHTTCC------
T ss_pred cccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHH---H----HHHHcCCC------
Confidence 2 1234668999999999999999999999999999999 9999986543221 1 11111110
Q ss_pred hhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhcc
Q 006677 569 ELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQS 614 (635)
Q Consensus 569 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~~~ 614 (635)
..........+.+++.+||+.+|++||++.|++++|+.+...
T Consensus 238 ----~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~ 279 (327)
T 3poz_A 238 ----LPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp ----CCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTS
T ss_pred ----CCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhh
Confidence 011112334677888899999999999999999999998753
No 61
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=4.1e-40 Score=340.69 Aligned_cols=241 Identities=22% Similarity=0.363 Sum_probs=192.9
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccC--ChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEeccCC
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASG 419 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g 419 (635)
.+.||+|+||+||+|... +++.||+|++..... ..+.+.+|+.+++.+ +||||+++++++.+.+..++||||+++|
T Consensus 12 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~lv~e~~~~~ 90 (323)
T 3tki_A 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML-NHENVVKFYGHRREGNIQYLFLEYCSGG 90 (323)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEEECCTTE
T ss_pred eeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhC-CCCCCCeEEEEEecCCeEEEEEEcCCCC
Confidence 468999999999999976 688899999865432 246688999999999 9999999999999999999999999999
Q ss_pred ChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCC----
Q 006677 420 SLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP---- 495 (635)
Q Consensus 420 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~---- 495 (635)
+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 91 ~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 162 (323)
T 3tki_A 91 ELFDRIEPD-----IGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 162 (323)
T ss_dssp EGGGGSBTT-----TBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEECEETTEEC
T ss_pred cHHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccchHHEEEeCCCCEEEEEeeccceeccCCccc
Confidence 999999743 34899999999999999999999998 999999999999999999999999999754321
Q ss_pred --CCCCCCCcccCcccccCCCC-CCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhc
Q 006677 496 --ATPSRSAGYRAPEVIETRKH-SHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMR 572 (635)
Q Consensus 496 --~~~~~~~~y~aPE~~~~~~~-~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 572 (635)
....+|+.|+|||++.+..+ +.++|||||||++|||++|+.||........ ....|. .....
T Consensus 163 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~~~~~~----~~~~~---------- 227 (323)
T 3tki_A 163 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ-EYSDWK----EKKTY---------- 227 (323)
T ss_dssp CBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSH-HHHHHH----TTCTT----------
T ss_pred ccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHH-HHHHHh----ccccc----------
Confidence 24468899999999987775 7789999999999999999999975442211 111111 01000
Q ss_pred ccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006677 573 FQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 573 ~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 607 (635)
..........+.+++.+||+.||++|||++|++++
T Consensus 228 ~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 228 LNPWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp STTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred CCccccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 00011122345678889999999999999999874
No 62
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=1.4e-39 Score=346.53 Aligned_cols=245 Identities=19% Similarity=0.301 Sum_probs=190.4
Q ss_pred ccccccCceEEEEEEec-CCCeEEEEEeecccCChHHHHHHHHHHHhhcCCCceeceeEEEEe----CCeeEEEEEeccC
Q 006677 344 EVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYS----KDEKLLVYDYFAS 418 (635)
Q Consensus 344 ~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~----~~~~~lv~e~~~~ 418 (635)
++||+|+||+||+|... +++.||||++.. ...+.+|++++.++.+||||+++++++.. ....++||||+++
T Consensus 68 ~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~g 143 (400)
T 1nxk_A 68 QVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDG 143 (400)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEC----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCCS
T ss_pred ceeeeccCeEEEEEEECCCCCEEEEEEeCc----chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeCCC
Confidence 57999999999999975 478899999864 35678899988777799999999999876 5578999999999
Q ss_pred CChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcC---CCCeEEeecCCCCCCCCC
Q 006677 419 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQ---DLDGCISDFGLTPLMNVP 495 (635)
Q Consensus 419 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~---~~~~ki~DfGla~~~~~~ 495 (635)
|+|.+++.... ...+++..+..++.||+.||+|||+.+ |+||||||+|||++. ++.+||+|||+++.....
T Consensus 144 g~L~~~l~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~ 217 (400)
T 1nxk_A 144 GELFSRIQDRG---DQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH 217 (400)
T ss_dssp EEHHHHHHCC------CCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSTTCCEEECCCTTCEECC--
T ss_pred CcHHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCcCcceEEEecCCCCccEEEEecccccccCCC
Confidence 99999997532 235899999999999999999999998 999999999999998 789999999999765432
Q ss_pred ---CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhc
Q 006677 496 ---ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMR 572 (635)
Q Consensus 496 ---~~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 572 (635)
....+|+.|+|||++.+..++.++|||||||++|||++|+.||........... ....+....+... .. .
T Consensus 218 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~--~~~~i~~~~~~~~--~~---~ 290 (400)
T 1nxk_A 218 NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPG--MKTRIRMGQYEFP--NP---E 290 (400)
T ss_dssp ---------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCS--HHHHHHHTCCCCC--TT---T
T ss_pred CccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHH--HHHHHHcCcccCC--Cc---c
Confidence 244578999999999999999999999999999999999999986554332110 1111111111000 00 0
Q ss_pred ccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 006677 573 FQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMI 608 (635)
Q Consensus 573 ~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L 608 (635)
. ......+.+++.+||+.||++|||+.|++++-
T Consensus 291 ~---~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp 323 (400)
T 1nxk_A 291 W---SEVSEEVKMLIRNLLKTEPTQRMTITEFMNHP 323 (400)
T ss_dssp T---TTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSH
T ss_pred c---ccCCHHHHHHHHHHCCCChhHCcCHHHHhcCc
Confidence 1 11234567788899999999999999999853
No 63
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=4.3e-40 Score=344.23 Aligned_cols=238 Identities=24% Similarity=0.319 Sum_probs=194.0
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeeccc----CChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEecc
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVV----VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 417 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 417 (635)
.++||+|+||+||+|+.. +++.||+|+++... ...+.+.+|.+++..+.+||||+++++++.+.+..|+||||++
T Consensus 28 ~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~ 107 (353)
T 3txo_A 28 IRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVN 107 (353)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred EEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEEEEeCCC
Confidence 468999999999999976 47889999997642 2345677899999988789999999999999999999999999
Q ss_pred CCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCC--
Q 006677 418 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP-- 495 (635)
Q Consensus 418 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~-- 495 (635)
+|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 108 gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~~ 179 (353)
T 3txo_A 108 GGDLMFHIQKS-----RRFDEARARFYAAEIISALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGV 179 (353)
T ss_dssp SCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCSCC---
T ss_pred CCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---CcccCCCHHHEEECCCCCEEEccccceeecccCCc
Confidence 99999999743 24899999999999999999999998 999999999999999999999999999864322
Q ss_pred --CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcc
Q 006677 496 --ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRF 573 (635)
Q Consensus 496 --~~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 573 (635)
....||+.|+|||++.+..++.++|||||||++|||++|+.||...+.. .....+....... .
T Consensus 180 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~------~~~~~i~~~~~~~---------p 244 (353)
T 3txo_A 180 TTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENED------DLFEAILNDEVVY---------P 244 (353)
T ss_dssp ------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHCCCCC---------C
T ss_pred cccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHH------HHHHHHHcCCCCC---------C
Confidence 2345899999999999989999999999999999999999999754322 2222222221110 0
Q ss_pred cChHHHHHHHHHHHHHcccCCCCCCCCH------HHHHH
Q 006677 574 QNIEEEMVQMLQIGMACVAKVPDMRPNM------DEVVR 606 (635)
Q Consensus 574 ~~~~~~~~~l~~l~~~cl~~~P~~RPs~------~evl~ 606 (635)
......+.+++.+|++.||++||++ +|+++
T Consensus 245 ---~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 245 ---TWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp ---TTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred ---CCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 1122346677889999999999998 77776
No 64
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=5.8e-40 Score=340.67 Aligned_cols=237 Identities=22% Similarity=0.325 Sum_probs=194.6
Q ss_pred hccccccCceEEEEEEe-cCCCeEEEEEeeccc----CChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEecc
Q 006677 343 AEVLGKGSYGTAYKAVL-EESTTVVVKRLKEVV----VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 417 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 417 (635)
.+.||+|+||.||+|.. .+++.||+|++.... .....+.+|+++++.+ +||||+++++++...+..++||||+
T Consensus 14 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~lv~E~~- 91 (336)
T 3h4j_B 14 RETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLL-RHPHIIKLYDVITTPTDIVMVIEYA- 91 (336)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEEECCC-
T ss_pred EEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhC-CCCCCCeEEEEEEeCCEEEEEEECC-
Confidence 46899999999999997 467899999987542 2345788999999999 8999999999999999999999999
Q ss_pred CCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCC--
Q 006677 418 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP-- 495 (635)
Q Consensus 418 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~-- 495 (635)
+|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||++......
T Consensus 92 ~g~l~~~l~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~~ 163 (336)
T 3h4j_B 92 GGELFDYIVEK-----KRMTEDEGRRFFQQIICAIEYCHRHK---IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNF 163 (336)
T ss_dssp CEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSBT
T ss_pred CCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCchhhEEEcCCCCEEEEEeccceeccCCcc
Confidence 68999988643 24899999999999999999999998 999999999999999999999999999876543
Q ss_pred -CCCCCCCcccCcccccCCCC-CCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcc
Q 006677 496 -ATPSRSAGYRAPEVIETRKH-SHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRF 573 (635)
Q Consensus 496 -~~~~~~~~y~aPE~~~~~~~-~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 573 (635)
....+|+.|+|||++.+..+ +.++|||||||++|||++|+.||......+.... +.....
T Consensus 164 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~---------------i~~~~~--- 225 (336)
T 3h4j_B 164 LKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKK---------------VNSCVY--- 225 (336)
T ss_dssp TCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBCC---------------CCSSCC---
T ss_pred cccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHHH---------------HHcCCC---
Confidence 34568899999999988776 6899999999999999999999986543332210 000000
Q ss_pred cChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006677 574 QNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 574 ~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 607 (635)
.........+.+++.+|++.||.+|||++|++++
T Consensus 226 ~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 259 (336)
T 3h4j_B 226 VMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRD 259 (336)
T ss_dssp CCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred CCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence 0011122346678889999999999999999984
No 65
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=2.6e-40 Score=348.40 Aligned_cols=252 Identities=23% Similarity=0.346 Sum_probs=200.7
Q ss_pred hccccccCceEEEEEEec------CCCeEEEEEeecccC--ChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEE
Q 006677 343 AEVLGKGSYGTAYKAVLE------ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYD 414 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~------~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e 414 (635)
.+.||+|+||+||+|.+. ++..||||+++.... ....+.+|+.++.++ +||||+++++++......++|||
T Consensus 76 ~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~lv~e 154 (367)
T 3l9p_A 76 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF-NHQNIVRCIGVSLQSLPRFILLE 154 (367)
T ss_dssp EEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhC-CCCCCCeEEEEEecCCCCEEEEE
Confidence 568999999999999953 356799999975432 245688899999999 99999999999999999999999
Q ss_pred eccCCChhhhccCCCC--CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCC---CeEEeecCCC
Q 006677 415 YFASGSLSTLLHGNRG--AGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDL---DGCISDFGLT 489 (635)
Q Consensus 415 ~~~~g~L~~~l~~~~~--~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~---~~ki~DfGla 489 (635)
|+++|+|.+++...+. .....+++..++.++.||+.||+|||+.+ |+||||||+|||++.++ .+||+|||++
T Consensus 155 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~~~~kL~DFG~a 231 (367)
T 3l9p_A 155 LMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMA 231 (367)
T ss_dssp CCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEECCCHHH
T ss_pred eCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChhhEEEecCCCCceEEECCCccc
Confidence 9999999999975432 12235899999999999999999999998 99999999999999555 5999999998
Q ss_pred CCCC------CCCCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccc
Q 006677 490 PLMN------VPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWT 562 (635)
Q Consensus 490 ~~~~------~~~~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (635)
+... ......+|+.|+|||++.+..++.++|||||||++|||++ |..||...... .....+......
T Consensus 232 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~------~~~~~i~~~~~~ 305 (367)
T 3l9p_A 232 RDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ------EVLEFVTSGGRM 305 (367)
T ss_dssp HHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH------HHHHHHHTTCCC
T ss_pred cccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH------HHHHHHHcCCCC
Confidence 6431 1222346788999999999999999999999999999998 99999754321 112222111110
Q ss_pred cccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhccC
Q 006677 563 AEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 615 (635)
Q Consensus 563 ~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~~~~ 615 (635)
.........+.+++.+||+.+|++|||+.|++++|+.+.+..
T Consensus 306 -----------~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~ 347 (367)
T 3l9p_A 306 -----------DPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 347 (367)
T ss_dssp -----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred -----------CCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhCh
Confidence 001122335678888999999999999999999999988654
No 66
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=8.7e-40 Score=344.16 Aligned_cols=256 Identities=17% Similarity=0.214 Sum_probs=193.3
Q ss_pred hccccccCceEEEEEEecC------CCeEEEEEeecccCChHHHHHHHHHHHhhc--------------CCCceeceeEE
Q 006677 343 AEVLGKGSYGTAYKAVLEE------STTVVVKRLKEVVVGKRDFEQQMEIVGRVG--------------QHPNVVPLRAY 402 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~~------~~~vavK~l~~~~~~~~~~~~e~~~l~~l~--------------~h~niv~l~~~ 402 (635)
.+.||+|+||+||+|.+.. ++.||||++.... ..+.+|++++.++. +|+||++++++
T Consensus 40 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~ 116 (364)
T 3op5_A 40 GLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDN---GPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGS 116 (364)
T ss_dssp EEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTC---HHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEEEE
T ss_pred EEEEecCCCeEEEEeeecCccccccccceEEEEeeccc---hhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEEee
Confidence 4689999999999999765 3679999986542 23444444444332 69999999999
Q ss_pred EEeC----CeeEEEEEeccCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEc--
Q 006677 403 YYSK----DEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLIN-- 476 (635)
Q Consensus 403 ~~~~----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~-- 476 (635)
+... ...++||||+ +++|.+++.... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++
T Consensus 117 ~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~----~~l~~~~~~~i~~qi~~~l~~lH~~~---iiHrDlkp~Nill~~~ 188 (364)
T 3op5_A 117 GLHDKNGKSYRFMIMDRF-GSDLQKIYEANA----KRFSRKTVLQLSLRILDILEYIHEHE---YVHGDIKASNLLLNYK 188 (364)
T ss_dssp EEEEETTEEEEEEEEECE-EEEHHHHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEESS
T ss_pred eeeccCCcceEEEEEeCC-CCCHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEEecCCHHHEEEecC
Confidence 9875 4479999999 999999997532 34999999999999999999999998 99999999999999
Q ss_pred CCCCeEEeecCCCCCCCCC-----------CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCC
Q 006677 477 QDLDGCISDFGLTPLMNVP-----------ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDD 545 (635)
Q Consensus 477 ~~~~~ki~DfGla~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~ 545 (635)
.++.+||+|||+++..... ....+|+.|+|||++.+..++.++|||||||++|||+||+.||.......
T Consensus 189 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~ 268 (364)
T 3op5_A 189 NPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDP 268 (364)
T ss_dssp CTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCH
T ss_pred CCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCH
Confidence 8899999999999654321 12338889999999999999999999999999999999999998543221
Q ss_pred CCChhHHHHHHhhhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhccCC
Q 006677 546 MVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDS 616 (635)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~~~~~ 616 (635)
....+....... ......+..+.. . .....+.+++..||+.+|++||++.++++.|+++.....
T Consensus 269 --~~~~~~~~~~~~-~~~~~~~~~~~~-~---~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~~ 332 (364)
T 3op5_A 269 --KYVRDSKIRYRE-NIASLMDKCFPA-A---NAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIG 332 (364)
T ss_dssp --HHHHHHHHHHHH-CHHHHHHHHSCT-T---CCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred --HHHHHHHHHhhh-hHHHHHHHhccc-c---cCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcC
Confidence 111111111111 111112211110 1 113456778889999999999999999999999886543
No 67
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=1.1e-39 Score=342.83 Aligned_cols=244 Identities=20% Similarity=0.307 Sum_probs=191.1
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccCChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEeccCCCh
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSL 421 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 421 (635)
.+.||+|+||+||++... +++.||+|++.......+.+.+|+.+++++ +||||+++++++...+..++||||+++|+|
T Consensus 25 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lv~e~~~~~~L 103 (361)
T 3uc3_A 25 VKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSL-RHPNIVRFKEVILTPTHLAIIMEYASGGEL 103 (361)
T ss_dssp EEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSCHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEEECCCSCBH
T ss_pred EEEeccCCCEEEEEEEECCCCcEEEEEEEecCccccHHHHHHHHHHHhC-CCCCCCcEEEEEeeCCEEEEEEEeCCCCCH
Confidence 467999999999999976 678899999987666667899999999999 899999999999999999999999999999
Q ss_pred hhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCC--eEEeecCCCCCCCC---CC
Q 006677 422 STLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLD--GCISDFGLTPLMNV---PA 496 (635)
Q Consensus 422 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~--~ki~DfGla~~~~~---~~ 496 (635)
.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++. +||+|||+++.... ..
T Consensus 104 ~~~l~~~-----~~~~~~~~~~i~~ql~~~L~~LH~~~---ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~~~~ 175 (361)
T 3uc3_A 104 YERICNA-----GRFSEDEARFFFQQLLSGVSYCHSMQ---ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPK 175 (361)
T ss_dssp HHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CCSCCCCGGGEEECSSSSCCEEECCCCCC----------
T ss_pred HHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCceEEEeecCccccccccCCCC
Confidence 9998642 24899999999999999999999998 999999999999987765 99999999875432 23
Q ss_pred CCCCCCcccCcccccCCCCCCc-cchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcccC
Q 006677 497 TPSRSAGYRAPEVIETRKHSHK-SDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQN 575 (635)
Q Consensus 497 ~~~~~~~y~aPE~~~~~~~~~k-~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 575 (635)
...+|+.|+|||++.+..++.+ +|||||||++|||++|+.||....... ........+........ ....
T Consensus 176 ~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~--~~~~~~~~~~~~~~~~~-------~~~~ 246 (361)
T 3uc3_A 176 STVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPR--DYRKTIQRILSVKYSIP-------DDIR 246 (361)
T ss_dssp -----CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CC--CHHHHHHHHHTTCCCCC-------TTSC
T ss_pred CCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHH--HHHHHHHHHhcCCCCCC-------CcCC
Confidence 4458899999999988887665 899999999999999999998654322 23333333332221100 0001
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006677 576 IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 576 ~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 607 (635)
....+.+++.+||+.||++|||+.|++++
T Consensus 247 ---~s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 247 ---ISPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp ---CCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred ---CCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 12356678889999999999999999985
No 68
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=1.5e-40 Score=344.33 Aligned_cols=246 Identities=23% Similarity=0.358 Sum_probs=194.9
Q ss_pred hccccccCceEEEEEEecC-CCe----EEEEEeeccc--CChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEe
Q 006677 343 AEVLGKGSYGTAYKAVLEE-STT----VVVKRLKEVV--VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDY 415 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~~-~~~----vavK~l~~~~--~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~ 415 (635)
.+.||+|+||+||+|.+.. +.. |++|.+.... .....+.+|+.++.++ +||||+++++++. ++..++||||
T Consensus 18 ~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~-~~~~~~v~e~ 95 (325)
T 3kex_A 18 LKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSL-DHAHIVRLLGLCP-GSSLQLVTQY 95 (325)
T ss_dssp EEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTC-CCTTBCCEEEEEC-BSSEEEEEEC
T ss_pred eeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcC-CCCCcCeEEEEEc-CCccEEEEEe
Confidence 4689999999999999653 443 7777775442 2245678899999999 9999999999886 5678999999
Q ss_pred ccCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCC
Q 006677 416 FASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP 495 (635)
Q Consensus 416 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~ 495 (635)
+++|+|.+++...+ ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 96 ~~~~~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 168 (325)
T 3kex_A 96 LPLGSLLDHVRQHR----GALGPQLLLNWGVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPD 168 (325)
T ss_dssp CTTCBSHHHHHSSG----GGSCTTHHHHHHHHHHHHHHHHHHTT---CCCSCCSSTTEEESSSSCEEECSCSGGGGSCCC
T ss_pred CCCCCHHHHHHHcc----ccCCHHHHHHHHHHHHHHHHHHHhCC---CCCCccchheEEECCCCeEEECCCCcccccCcc
Confidence 99999999997542 34889999999999999999999998 999999999999999999999999999876433
Q ss_pred C------CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccchh
Q 006677 496 A------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDV 568 (635)
Q Consensus 496 ~------~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 568 (635)
. ...++..|+|||++.+..++.++|||||||++|||+| |..||......+. . .. +.......
T Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~---~---~~-~~~~~~~~---- 237 (325)
T 3kex_A 169 DKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEV---P---DL-LEKGERLA---- 237 (325)
T ss_dssp TTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHH---H---HH-HHTTCBCC----
T ss_pred cccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHH---H---HH-HHcCCCCC----
Confidence 2 2235668999999998999999999999999999999 9999986543221 1 11 11111000
Q ss_pred hhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhcc
Q 006677 569 ELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQS 614 (635)
Q Consensus 569 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~~~ 614 (635)
........+.+++.+||+.||++||++.|++++|+.+...
T Consensus 238 ------~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~ 277 (325)
T 3kex_A 238 ------QPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARD 277 (325)
T ss_dssp ------CCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTS
T ss_pred ------CCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 0011122456788899999999999999999999998753
No 69
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=4.8e-40 Score=343.01 Aligned_cols=253 Identities=23% Similarity=0.395 Sum_probs=201.5
Q ss_pred hccccccCceEEEEEEecC------CCeEEEEEeecccC--ChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEE
Q 006677 343 AEVLGKGSYGTAYKAVLEE------STTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYD 414 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~~------~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e 414 (635)
.+.||+|+||.||+|...+ ++.||+|+++.... ..+.+.+|++++.++ +||||+++++++...+..++|||
T Consensus 52 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e 130 (343)
T 1luf_A 52 VRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEF-DNPNIVKLLGVCAVGKPMCLLFE 130 (343)
T ss_dssp EEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEccCCceEEEEe
Confidence 4689999999999999753 37899999976432 245788999999999 99999999999999999999999
Q ss_pred eccCCChhhhccCCCCC-------------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEE
Q 006677 415 YFASGSLSTLLHGNRGA-------------------GRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLI 475 (635)
Q Consensus 415 ~~~~g~L~~~l~~~~~~-------------------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll 475 (635)
|+++|+|.+++...... ....+++..++.++.||+.||+|||+.+ |+||||||+||++
T Consensus 131 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIl~ 207 (343)
T 1luf_A 131 YMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK---FVHRDLATRNCLV 207 (343)
T ss_dssp CCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEE
T ss_pred cCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCcceEEE
Confidence 99999999999764311 1246899999999999999999999998 9999999999999
Q ss_pred cCCCCeEEeecCCCCCCCC------CCCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCC
Q 006677 476 NQDLDGCISDFGLTPLMNV------PATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVD 548 (635)
Q Consensus 476 ~~~~~~ki~DfGla~~~~~------~~~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~t-g~~p~~~~~~~~~~~ 548 (635)
+.++.+||+|||+++.... .....+++.|+|||++.+..++.++||||||+++|||+| |..||.....
T Consensus 208 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~----- 282 (343)
T 1luf_A 208 GENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAH----- 282 (343)
T ss_dssp CGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH-----
T ss_pred CCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCCh-----
Confidence 9999999999999865422 223346778999999998899999999999999999999 9999975432
Q ss_pred hhHHHHHHhhhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhccCC
Q 006677 549 LPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDS 616 (635)
Q Consensus 549 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~~~~~ 616 (635)
......+...... . ........+.+++.+||+.||++||++.|++++|+++.+...
T Consensus 283 -~~~~~~~~~~~~~-~----------~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~~ 338 (343)
T 1luf_A 283 -EEVIYYVRDGNIL-A----------CPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERAE 338 (343)
T ss_dssp -HHHHHHHHTTCCC-C----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC---
T ss_pred -HHHHHHHhCCCcC-C----------CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhhh
Confidence 1112222111110 0 011223457778889999999999999999999999986543
No 70
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=9.5e-40 Score=334.02 Aligned_cols=239 Identities=21% Similarity=0.319 Sum_probs=187.9
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccC---------------------------ChHHHHHHHHHHHhhcCCC
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV---------------------------GKRDFEQQMEIVGRVGQHP 394 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~---------------------------~~~~~~~e~~~l~~l~~h~ 394 (635)
.+.||+|+||.||+|... +++.||+|++..... ..+.+.+|++++.++ +||
T Consensus 18 ~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~ 96 (298)
T 2zv2_A 18 KDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKL-DHP 96 (298)
T ss_dssp EEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTC-CCT
T ss_pred EeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhC-CCC
Confidence 467999999999999965 578899999875431 124688999999999 999
Q ss_pred ceeceeEEEEe--CCeeEEEEEeccCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCC
Q 006677 395 NVVPLRAYYYS--KDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASN 472 (635)
Q Consensus 395 niv~l~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~N 472 (635)
||+++++++.. .+..++||||+++|+|.+++.. ..+++..+..++.||+.||+|||+.+ |+||||||+|
T Consensus 97 ~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~N 167 (298)
T 2zv2_A 97 NVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL------KPLSEDQARFYFQDLIKGIEYLHYQK---IIHRDIKPSN 167 (298)
T ss_dssp TBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS------SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGG
T ss_pred CCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc------CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHH
Confidence 99999999987 5678999999999999887642 34999999999999999999999998 9999999999
Q ss_pred eEEcCCCCeEEeecCCCCCCCCC----CCCCCCCcccCcccccCCC---CCCccchhhHHHHHHHHHhCCCCCCCCCCCC
Q 006677 473 VLINQDLDGCISDFGLTPLMNVP----ATPSRSAGYRAPEVIETRK---HSHKSDVYSFGVLLLEMLTGKAPLQSPTRDD 545 (635)
Q Consensus 473 Ill~~~~~~ki~DfGla~~~~~~----~~~~~~~~y~aPE~~~~~~---~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~ 545 (635)
|+++.++.+||+|||++...... ....+|+.|+|||++.+.. ++.++|||||||++|||++|+.||....
T Consensus 168 il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~--- 244 (298)
T 2zv2_A 168 LLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDER--- 244 (298)
T ss_dssp EEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSS---
T ss_pred EEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCcc---
Confidence 99999999999999999765433 2346789999999997765 3778999999999999999999997532
Q ss_pred CCChhHHHHHHhhhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006677 546 MVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 607 (635)
...+...+....... .... .....+.+++.+||+.||++|||+.|++++
T Consensus 245 ---~~~~~~~~~~~~~~~-------~~~~---~~~~~l~~li~~~l~~dp~~R~s~~e~l~h 293 (298)
T 2zv2_A 245 ---IMCLHSKIKSQALEF-------PDQP---DIAEDLKDLITRMLDKNPESRIVVPEIKLH 293 (298)
T ss_dssp ---HHHHHHHHHHCCCCC-------CSSS---CCCHHHHHHHHHHTCSCTTTSCCHHHHTTC
T ss_pred ---HHHHHHHHhcccCCC-------CCcc---ccCHHHHHHHHHHhhcChhhCCCHHHHhcC
Confidence 112222221111100 0011 122356778889999999999999999763
No 71
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=2.4e-39 Score=337.78 Aligned_cols=245 Identities=19% Similarity=0.293 Sum_probs=194.0
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccCC----hHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEecc
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG----KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 417 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~----~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 417 (635)
.+.||+|+||.||+|+.. +++.||+|+++..... .+.+.+|..++.++.+||||+++++++.+.+..++||||++
T Consensus 14 ~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~e~~~ 93 (345)
T 3a8x_A 14 LRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVN 93 (345)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred EEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEEEeCCC
Confidence 468999999999999976 4788999999865432 23477888999888789999999999999999999999999
Q ss_pred CCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCC---
Q 006677 418 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV--- 494 (635)
Q Consensus 418 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~--- 494 (635)
+|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 94 gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~~ 165 (345)
T 3a8x_A 94 GGDLMFHMQRQ-----RKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD 165 (345)
T ss_dssp SCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTTC
T ss_pred CCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEECCCCCEEEEeccccccccCCCC
Confidence 99999999743 24899999999999999999999998 99999999999999999999999999976432
Q ss_pred -CCCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCC--ChhHHHHHHhhhccccccchhhhh
Q 006677 495 -PATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMV--DLPRWVQSVVREEWTAEVFDVELM 571 (635)
Q Consensus 495 -~~~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~d~~~~ 571 (635)
.....+|+.|+|||++.+..++.++|||||||++|||++|+.||......+.. .........+......
T Consensus 166 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~-------- 237 (345)
T 3a8x_A 166 TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR-------- 237 (345)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCCC--------
T ss_pred cccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCCC--------
Confidence 22446899999999999999999999999999999999999999754322111 1111111111111100
Q ss_pred cccChHHHHHHHHHHHHHcccCCCCCCCCH------HHHHH
Q 006677 572 RFQNIEEEMVQMLQIGMACVAKVPDMRPNM------DEVVR 606 (635)
Q Consensus 572 ~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~------~evl~ 606 (635)
.. ......+.+++.+||+.||++||++ +|+++
T Consensus 238 ~p---~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~ 275 (345)
T 3a8x_A 238 IP---RSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQG 275 (345)
T ss_dssp CC---TTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHT
T ss_pred CC---CCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhc
Confidence 01 1122356677889999999999996 56665
No 72
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=1.8e-39 Score=330.05 Aligned_cols=247 Identities=22% Similarity=0.434 Sum_probs=195.5
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccCC--------hHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEE
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG--------KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVY 413 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~--------~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~ 413 (635)
.+.||+|+||+||+|... +++.||+|++...... .+.+.+|++++.++ +||||+++++++.+.. ++||
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~--~lv~ 100 (287)
T 4f0f_A 24 EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNL-NHPNIVKLYGLMHNPP--RMVM 100 (287)
T ss_dssp EEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTC-CCTTBCCEEEEETTTT--EEEE
T ss_pred hhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhC-CCCCchhhheeecCCC--eEEE
Confidence 467999999999999974 6888999998654321 16788999999999 8999999999986544 7999
Q ss_pred EeccCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCC-----eEEeecCC
Q 006677 414 DYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLD-----GCISDFGL 488 (635)
Q Consensus 414 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~-----~ki~DfGl 488 (635)
||+++|+|.+++.... ..+++..+..++.|++.||+|||+.+ ++|+||||||+||+++.++. +||+|||+
T Consensus 101 e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~l~~~l~~lH~~~-~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~ 175 (287)
T 4f0f_A 101 EFVPCGDLYHRLLDKA----HPIKWSVKLRLMLDIALGIEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADFGL 175 (287)
T ss_dssp ECCTTCBHHHHHHCTT----SCCCHHHHHHHHHHHHHHHHHHHTSS-SCCBCSCCSGGGEEESCCCTTCSCCEEECCCTT
T ss_pred EecCCCCHHHHHhccc----CCccHHHHHHHHHHHHHHHHHHHhCC-CCeecCCCCcceEEEeccCCCCceeEEeCCCCc
Confidence 9999999999886432 35999999999999999999999985 45999999999999988776 99999999
Q ss_pred CCCCCCCC-CCCCCCcccCccccc--CCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcccccc
Q 006677 489 TPLMNVPA-TPSRSAGYRAPEVIE--TRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEV 565 (635)
Q Consensus 489 a~~~~~~~-~~~~~~~y~aPE~~~--~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 565 (635)
++...... ...+++.|+|||++. ...++.++|||||||++|||++|+.||......+ ................
T Consensus 176 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~----~~~~~~~~~~~~~~~~ 251 (287)
T 4f0f_A 176 SQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGK----IKFINMIREEGLRPTI 251 (287)
T ss_dssp CBCCSSCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCH----HHHHHHHHHSCCCCCC
T ss_pred cccccccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccH----HHHHHHHhccCCCCCC
Confidence 97654432 356789999999984 4557899999999999999999999997544322 1112222222211111
Q ss_pred chhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHh
Q 006677 566 FDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEV 611 (635)
Q Consensus 566 ~d~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~ 611 (635)
.......+.+++.+||+.||++|||++|+++.|+++
T Consensus 252 ----------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 252 ----------PEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp ----------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred ----------CcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 112234567888899999999999999999999864
No 73
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.9e-40 Score=343.25 Aligned_cols=259 Identities=23% Similarity=0.333 Sum_probs=201.1
Q ss_pred hhccccccCceEEEEEEec------CCCeEEEEEeeccc--CChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEE
Q 006677 342 SAEVLGKGSYGTAYKAVLE------ESTTVVVKRLKEVV--VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVY 413 (635)
Q Consensus 342 ~~~~lG~G~fg~Vy~~~~~------~~~~vavK~l~~~~--~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~ 413 (635)
..+.||+|+||.||+|... ++..||+|++.... ...+.+.+|+.++.++.+||||+++++++...+..++||
T Consensus 49 ~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~ 128 (344)
T 1rjb_A 49 FGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIF 128 (344)
T ss_dssp EEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred eeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCccEEEE
Confidence 3578999999999999962 34579999997542 235678999999999988999999999999999999999
Q ss_pred EeccCCChhhhccCCCCC------------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEE
Q 006677 414 DYFASGSLSTLLHGNRGA------------------GRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLI 475 (635)
Q Consensus 414 e~~~~g~L~~~l~~~~~~------------------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll 475 (635)
||+++|+|.+++...... ....+++..+..++.||+.||+|||+.+ |+||||||+||++
T Consensus 129 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIll 205 (344)
T 1rjb_A 129 EYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS---CVHRDLAARNVLV 205 (344)
T ss_dssp ECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTT---EEETTCSGGGEEE
T ss_pred ecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChhhEEE
Confidence 999999999999764321 0134899999999999999999999998 9999999999999
Q ss_pred cCCCCeEEeecCCCCCCCCCCC------CCCCCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCC
Q 006677 476 NQDLDGCISDFGLTPLMNVPAT------PSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVD 548 (635)
Q Consensus 476 ~~~~~~ki~DfGla~~~~~~~~------~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~t-g~~p~~~~~~~~~~~ 548 (635)
+.++.+||+|||++........ ..+++.|+|||++.+..++.++||||||+++|||+| |..||......+
T Consensus 206 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~--- 282 (344)
T 1rjb_A 206 THGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDA--- 282 (344)
T ss_dssp ETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH---
T ss_pred cCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHH---
Confidence 9999999999999976543321 224667999999998899999999999999999998 999997654221
Q ss_pred hhHHHHHHhhhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhccCCCCC
Q 006677 549 LPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSENR 619 (635)
Q Consensus 549 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~~~~~~~~ 619 (635)
............. ........+.+++.+||+.||++|||+.|++++|+.+.....+..
T Consensus 283 ---~~~~~~~~~~~~~----------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~~~ 340 (344)
T 1rjb_A 283 ---NFYKLIQNGFKMD----------QPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADAEEAM 340 (344)
T ss_dssp ---HHHHHHHTTCCCC----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-------
T ss_pred ---HHHHHHhcCCCCC----------CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHHHHHH
Confidence 1122222211110 011123456778889999999999999999999999988766544
No 74
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.1e-39 Score=331.75 Aligned_cols=253 Identities=27% Similarity=0.412 Sum_probs=194.9
Q ss_pred hccccccCceEEEEEEecCCCeEEEEEeecccCChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEeccCCChh
Q 006677 343 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLS 422 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~ 422 (635)
.+.||+|+||+||+|... ++.||+|++... ...+.+.+|++++.++ +||||+++++++. +..++||||+++|+|.
T Consensus 13 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~-~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~--~~~~lv~e~~~~~~L~ 87 (307)
T 2eva_A 13 EEVVGRGAFGVVCKAKWR-AKDVAIKQIESE-SERKAFIVELRQLSRV-NHPNIVKLYGACL--NPVCLVMEYAEGGSLY 87 (307)
T ss_dssp EEEEECCSSSEEEEEEET-TEEEEEEECSST-THHHHHHHHHHHHHHC-CCTTBCCEEEBCT--TTTEEEEECCTTCBHH
T ss_pred eeEeecCCCceEEEEEEC-CeeEEEEEecCh-hHHHHHHHHHHHHhcC-CCCCcCeEEEEEc--CCcEEEEEcCCCCCHH
Confidence 468999999999999986 688999998643 2356789999999999 9999999999876 4589999999999999
Q ss_pred hhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCC-eEEeecCCCCCCCCC-CCCCC
Q 006677 423 TLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLD-GCISDFGLTPLMNVP-ATPSR 500 (635)
Q Consensus 423 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~-~ki~DfGla~~~~~~-~~~~~ 500 (635)
++++.... ...+++..++.++.|+++||+|||+.+...|+||||||+||+++.++. +||+|||++...... ....+
T Consensus 88 ~~l~~~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~~~~~~g 165 (307)
T 2eva_A 88 NVLHGAEP--LPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKG 165 (307)
T ss_dssp HHHHCSSS--EECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC------------C
T ss_pred HHHhccCC--CCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccccccCCC
Confidence 99975431 234789999999999999999999932223999999999999998887 799999999765433 23457
Q ss_pred CCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcccChHHHH
Q 006677 501 SAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEEM 580 (635)
Q Consensus 501 ~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 580 (635)
++.|+|||++.+..++.++||||||+++|||++|+.||....... ......... ..... ......
T Consensus 166 t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~----~~~~~~~~~-~~~~~----------~~~~~~ 230 (307)
T 2eva_A 166 SAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPA----FRIMWAVHN-GTRPP----------LIKNLP 230 (307)
T ss_dssp CTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSH----HHHHHHHHT-TCCCC----------CBTTCC
T ss_pred CCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccH----HHHHHHHhc-CCCCC----------cccccC
Confidence 899999999999999999999999999999999999997543211 111111111 11000 011122
Q ss_pred HHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhccCCC
Q 006677 581 VQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSE 617 (635)
Q Consensus 581 ~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~~~~~~ 617 (635)
..+.+++.+||+.||++|||++|++++|+.+.+....
T Consensus 231 ~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~ 267 (307)
T 2eva_A 231 KPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPG 267 (307)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGCCC
T ss_pred HHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhccC
Confidence 3567788899999999999999999999999876654
No 75
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=3.8e-39 Score=338.59 Aligned_cols=242 Identities=21% Similarity=0.331 Sum_probs=196.4
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccCC---hHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEeccC
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS 418 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~ 418 (635)
.+.||+|+||.||+|... +++.||+|++...... .+.+.+|++++.++ +||||+++++++.+.+..++||||+++
T Consensus 34 ~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~~lv~e~~~g 112 (362)
T 2bdw_A 34 KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL-QHPNIVRLHDSIQEESFHYLVFDLVTG 112 (362)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred eeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEeCCEEEEEEecCCC
Confidence 578999999999999975 5789999999765443 34678899999999 999999999999999999999999999
Q ss_pred CChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCC---CeEEeecCCCCCCCCC
Q 006677 419 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDL---DGCISDFGLTPLMNVP 495 (635)
Q Consensus 419 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~---~~ki~DfGla~~~~~~ 495 (635)
|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++ .+||+|||++......
T Consensus 113 g~L~~~l~~~-----~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~ 184 (362)
T 2bdw_A 113 GELFEDIVAR-----EFYSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS 184 (362)
T ss_dssp CBHHHHHTTC-----SCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTC
T ss_pred CCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCchHHEEEecCCCCCCEEEeecCcceEecCC
Confidence 9999998642 34899999999999999999999998 99999999999998654 5999999999876543
Q ss_pred C---CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhc
Q 006677 496 A---TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMR 572 (635)
Q Consensus 496 ~---~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 572 (635)
. ...+|+.|+|||++.+..++.++|||||||++|||++|+.||...+. ......+........ .. .
T Consensus 185 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~------~~~~~~i~~~~~~~~--~~---~ 253 (362)
T 2bdw_A 185 EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ------HRLYAQIKAGAYDYP--SP---E 253 (362)
T ss_dssp CSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHTCCCCC--TT---G
T ss_pred cccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH------HHHHHHHHhCCCCCC--cc---c
Confidence 3 34688999999999999999999999999999999999999975432 122222222111100 00 0
Q ss_pred ccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006677 573 FQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 573 ~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 607 (635)
. ......+.+++.+||+.||++|||+.|++++
T Consensus 254 ~---~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 254 W---DTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp G---GGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred c---cCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 1 1122356678889999999999999999874
No 76
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=1.6e-39 Score=340.33 Aligned_cols=245 Identities=16% Similarity=0.289 Sum_probs=196.2
Q ss_pred hhccccccCceEEEEEEec-CCCeEEEEEeeccc------CChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEE
Q 006677 342 SAEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVV------VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYD 414 (635)
Q Consensus 342 ~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~------~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e 414 (635)
..+.||+|+||+||+|... +++.||+|++.... ...+.+.+|++++.++ +||||+++++++..++..++|||
T Consensus 28 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~lv~e 106 (351)
T 3c0i_A 28 LCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML-KHPHIVELLETYSSDGMLYMVFE 106 (351)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEEE
T ss_pred EeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhC-CCCCCCcEEEEEEeCCEEEEEEe
Confidence 3578999999999999975 57899999986431 2357799999999999 99999999999999999999999
Q ss_pred eccCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCC---eEEeecCCCCC
Q 006677 415 YFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLD---GCISDFGLTPL 491 (635)
Q Consensus 415 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~---~ki~DfGla~~ 491 (635)
|+++|+|.+++..... ....+++..+..++.||+.||+|||+++ |+||||||+|||++.++. +||+|||++..
T Consensus 107 ~~~g~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~ 182 (351)
T 3c0i_A 107 FMDGADLCFEIVKRAD-AGFVYSEAVASHYMRQILEALRYCHDNN---IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQ 182 (351)
T ss_dssp CCSSCBHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECSSSTTCCEEECCCTTCEE
T ss_pred CCCCCCHHHHHHHhcc-cCCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCChHHeEEecCCCCCcEEEecCcceeE
Confidence 9999999888754321 1234899999999999999999999998 999999999999987655 99999999976
Q ss_pred CCCCC----CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccch
Q 006677 492 MNVPA----TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFD 567 (635)
Q Consensus 492 ~~~~~----~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 567 (635)
..... ...+|+.|+|||++.+..++.++|||||||++|||++|+.||.... ......+....... .
T Consensus 183 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~-------~~~~~~i~~~~~~~---~ 252 (351)
T 3c0i_A 183 LGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK-------ERLFEGIIKGKYKM---N 252 (351)
T ss_dssp CCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSH-------HHHHHHHHHTCCCC---C
T ss_pred ecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcH-------HHHHHHHHcCCCCC---C
Confidence 65432 3458899999999999999999999999999999999999997532 11122222111110 0
Q ss_pred hhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006677 568 VELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVR 606 (635)
Q Consensus 568 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 606 (635)
.. ... .....+.+++.+||+.||++|||+.|+++
T Consensus 253 ~~--~~~---~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 253 PR--QWS---HISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp HH--HHT---TSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cc--ccc---cCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 00 001 11245677888999999999999999987
No 77
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=7.6e-40 Score=336.91 Aligned_cols=255 Identities=25% Similarity=0.406 Sum_probs=205.3
Q ss_pred hccccccCceEEEEEEe------cCCCeEEEEEeecccC--ChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEE
Q 006677 343 AEVLGKGSYGTAYKAVL------EESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYD 414 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~------~~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e 414 (635)
.+.||+|+||+||+|.. .+++.||+|+++.... ..+.+.+|++++.++.+||||+++++++...+..++|||
T Consensus 28 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e 107 (313)
T 1t46_A 28 GKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITE 107 (313)
T ss_dssp EEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred HHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCcEEEEe
Confidence 57899999999999985 2457899999975532 246788999999999889999999999999999999999
Q ss_pred eccCCChhhhccCCCCC-------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCe
Q 006677 415 YFASGSLSTLLHGNRGA-------------GRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDG 481 (635)
Q Consensus 415 ~~~~g~L~~~l~~~~~~-------------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ 481 (635)
|+++|+|.+++...... ....+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+
T Consensus 108 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~ 184 (313)
T 1t46_A 108 YCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRIT 184 (313)
T ss_dssp CCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEETTTEE
T ss_pred cCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCccceEEEcCCCCE
Confidence 99999999999754321 1234899999999999999999999998 9999999999999999999
Q ss_pred EEeecCCCCCCCCCCC------CCCCCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHH
Q 006677 482 CISDFGLTPLMNVPAT------PSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQ 554 (635)
Q Consensus 482 ki~DfGla~~~~~~~~------~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~ 554 (635)
||+|||++........ ..+++.|+|||++.+..++.++||||||+++|||+| |..||......+ ...
T Consensus 185 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~------~~~ 258 (313)
T 1t46_A 185 KICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS------KFY 258 (313)
T ss_dssp EECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSH------HHH
T ss_pred EEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchh------HHH
Confidence 9999999987654332 224567999999999899999999999999999999 999997654221 111
Q ss_pred HHhhhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhccCC
Q 006677 555 SVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDS 616 (635)
Q Consensus 555 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~~~~~ 616 (635)
.......... ........+.+++.+||+.||++|||+.|++++|+++.....
T Consensus 259 ~~~~~~~~~~----------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 310 (313)
T 1t46_A 259 KMIKEGFRML----------SPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISEST 310 (313)
T ss_dssp HHHHHTCCCC----------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTC
T ss_pred HHhccCCCCC----------CcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHhh
Confidence 2222211110 011123456778889999999999999999999999987543
No 78
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=1.9e-39 Score=336.53 Aligned_cols=240 Identities=19% Similarity=0.323 Sum_probs=190.5
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccC--ChHHHHHHHHHHHhhcCCCceeceeEEEEeCCe-----------
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDE----------- 408 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~----------- 408 (635)
.+.||+|+||.||+|... +++.||||+++.... ..+.+.+|+++++++ +||||+++++++.+...
T Consensus 11 ~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~~~~~~~~~~ 89 (332)
T 3qd2_B 11 IQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKL-EHPGIVRYFNAWLETPPEKWQEEMDEIW 89 (332)
T ss_dssp EEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSC-CCTTBCCEEEEEEECCSCHHHHHHHC--
T ss_pred eeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhC-CCCCEeeEEEEEEEeccchhhhhhhhhh
Confidence 568999999999999976 688999999975432 346789999999999 89999999999866442
Q ss_pred ----------------------------------------------eEEEEEeccCCChhhhccCCCCCCCCCCCHHHHH
Q 006677 409 ----------------------------------------------KLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRV 442 (635)
Q Consensus 409 ----------------------------------------------~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~ 442 (635)
.++||||+++|+|.+++.... .....++..+.
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~ 167 (332)
T 3qd2_B 90 LKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRC--SLEDREHGVCL 167 (332)
T ss_dssp ------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCC--SGGGSCHHHHH
T ss_pred hccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhccc--CccchhhHHHH
Confidence 789999999999999998643 23446778899
Q ss_pred HHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCC----------------CCCCCCCcccC
Q 006677 443 KILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP----------------ATPSRSAGYRA 506 (635)
Q Consensus 443 ~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~----------------~~~~~~~~y~a 506 (635)
.++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||+++..... ....+|+.|+|
T Consensus 168 ~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a 244 (332)
T 3qd2_B 168 HIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMS 244 (332)
T ss_dssp HHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGSC
T ss_pred HHHHHHHHHHHHHHhCC---eeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCccC
Confidence 99999999999999998 999999999999999999999999999765433 22357889999
Q ss_pred cccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcccChHHHHHHHHHH
Q 006677 507 PEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQI 586 (635)
Q Consensus 507 PE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l 586 (635)
||++.+..++.++|||||||++|||++|..|+... ........ .... ..........+.++
T Consensus 245 PE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~--------~~~~~~~~-~~~~----------~~~~~~~~~~~~~l 305 (332)
T 3qd2_B 245 PEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMER--------VRIITDVR-NLKF----------PLLFTQKYPQEHMM 305 (332)
T ss_dssp HHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHH--------HHHHHHHH-TTCC----------CHHHHHHCHHHHHH
T ss_pred hHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHH--------HHHHHHhh-ccCC----------CcccccCChhHHHH
Confidence 99999999999999999999999999987765310 00011100 0000 00112333456788
Q ss_pred HHHcccCCCCCCCCHHHHHHH
Q 006677 587 GMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 587 ~~~cl~~~P~~RPs~~evl~~ 607 (635)
+.+||+.||++|||++|++++
T Consensus 306 i~~~l~~~p~~Rps~~~~l~~ 326 (332)
T 3qd2_B 306 VQDMLSPSPTERPEATDIIEN 326 (332)
T ss_dssp HHHHHCSSGGGSCCHHHHHHS
T ss_pred HHHHccCCCCcCCCHHHHhhc
Confidence 899999999999999999873
No 79
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=2.3e-39 Score=333.93 Aligned_cols=238 Identities=19% Similarity=0.280 Sum_probs=197.3
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeeccc----CChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEecc
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVV----VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 417 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 417 (635)
.+.||+|+||+||+|+.. +++.||+|+++... ...+.+.+|..++..+ +||||+++++++.+.+..++||||++
T Consensus 11 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~Iv~~~~~~~~~~~~~lv~e~~~ 89 (318)
T 1fot_A 11 LRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIV-THPFIIRMWGTFQDAQQIFMIMDYIE 89 (318)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSC-CBTTBCCEEEEEECSSEEEEEECCCC
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhC-CCCCCceEeEEEEeCCEEEEEEeCCC
Confidence 468999999999999975 58899999997642 2346678899999998 99999999999999999999999999
Q ss_pred CCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCC-C
Q 006677 418 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP-A 496 (635)
Q Consensus 418 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~-~ 496 (635)
+|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++..... .
T Consensus 90 gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~~~ 161 (318)
T 1fot_A 90 GGELFSLLRKS-----QRFPNPVAKFYAAEVCLALEYLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTY 161 (318)
T ss_dssp SCBHHHHHHHT-----SSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECTTSCEEECCCSSCEECSSCBC
T ss_pred CCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChheEEEcCCCCEEEeecCcceecCCccc
Confidence 99999999743 24899999999999999999999998 999999999999999999999999999766443 3
Q ss_pred CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcccCh
Q 006677 497 TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNI 576 (635)
Q Consensus 497 ~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 576 (635)
...+|+.|+|||++.+..++.++|||||||++|||++|+.||...+. ......+...... ....
T Consensus 162 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~------~~~~~~i~~~~~~---------~p~~- 225 (318)
T 1fot_A 162 TLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNT------MKTYEKILNAELR---------FPPF- 225 (318)
T ss_dssp CCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH------HHHHHHHHHCCCC---------CCTT-
T ss_pred cccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH------HHHHHHHHhCCCC---------CCCC-
Confidence 45689999999999999999999999999999999999999975431 2222233222110 0111
Q ss_pred HHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 006677 577 EEEMVQMLQIGMACVAKVPDMRP-----NMDEVVRM 607 (635)
Q Consensus 577 ~~~~~~l~~l~~~cl~~~P~~RP-----s~~evl~~ 607 (635)
....+.+++.+|++.||++|| +++|++++
T Consensus 226 --~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~h 259 (318)
T 1fot_A 226 --FNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH 259 (318)
T ss_dssp --SCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred --CCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcC
Confidence 123566777899999999999 89999863
No 80
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=9.3e-40 Score=360.80 Aligned_cols=249 Identities=25% Similarity=0.422 Sum_probs=205.6
Q ss_pred hhccccccCceEEEEEEecCCCeEEEEEeecccCChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEeccCCCh
Q 006677 342 SAEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSL 421 (635)
Q Consensus 342 ~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 421 (635)
..+.||+|+||.||+|.+.++..||||+++......++|.+|+++++++ +|+||+++++++.. +..++||||+++|+|
T Consensus 271 ~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~-~~~~lv~e~~~~gsL 348 (535)
T 2h8h_A 271 LEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAVVSE-EPIYIVTEYMSKGSL 348 (535)
T ss_dssp EEEEEEECSSEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHC-CCTTBCCEEEEECS-SSCEEEECCCTTEEH
T ss_pred hheecccCCCeEEEEEEECCCceEEEEEeCCCCCCHHHHHHHHHHHHhC-CCCCEeeEEEEEee-ccceEeeehhcCCcH
Confidence 3578999999999999998888899999987766778899999999999 99999999999865 678999999999999
Q ss_pred hhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCC-----C
Q 006677 422 STLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP-----A 496 (635)
Q Consensus 422 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~-----~ 496 (635)
.++++... ...+++..++.++.||+.||+|||+++ |+||||||+|||+++++.+||+|||+++..... .
T Consensus 349 ~~~l~~~~---~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~ 422 (535)
T 2h8h_A 349 LDFLKGET---GKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 422 (535)
T ss_dssp HHHHSHHH---HTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHTTC
T ss_pred HHHHhhcC---CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHhhEEEcCCCcEEEcccccceecCCCceeccc
Confidence 99997432 124899999999999999999999998 999999999999999999999999999876432 2
Q ss_pred CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcccC
Q 006677 497 TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQN 575 (635)
Q Consensus 497 ~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 575 (635)
...++..|+|||++....++.++|||||||++|||++ |+.||...... ..... +...... ..
T Consensus 423 ~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~------~~~~~-i~~~~~~----------~~ 485 (535)
T 2h8h_A 423 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR------EVLDQ-VERGYRM----------PC 485 (535)
T ss_dssp STTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHH------HHHHH-HHTTCCC----------CC
T ss_pred CCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH------HHHHH-HHcCCCC----------CC
Confidence 2335678999999998899999999999999999999 99999754321 11111 1111111 01
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhccC
Q 006677 576 IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 615 (635)
Q Consensus 576 ~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~~~~ 615 (635)
.......+.+++.+||+.||++|||++++++.|+++....
T Consensus 486 ~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~ 525 (535)
T 2h8h_A 486 PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 525 (535)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCCC
T ss_pred CCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhcc
Confidence 1122345778888999999999999999999999887544
No 81
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=2.1e-39 Score=328.10 Aligned_cols=249 Identities=26% Similarity=0.434 Sum_probs=204.0
Q ss_pred hccccccCceEEEEEEecCCCeEEEEEeecccCChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEeccCCChh
Q 006677 343 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLS 422 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~ 422 (635)
.+.||+|+||+||+|...++..||+|++.......+.+.+|++++.++ +||||+++++++. .+..++||||+++++|.
T Consensus 18 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~ 95 (279)
T 1qpc_A 18 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL-QHQRLVRLYAVVT-QEPIYIITEYMENGSLV 95 (279)
T ss_dssp EEEEEEETTEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHC-CCTTBCCEEEEEC-SSSCEEEEECCTTCBHH
T ss_pred eeeecCCCCeEEEEEEEcCCcEEEEEEecCCcccHHHHHHHHHHHHhC-CCcCcceEEEEEc-CCCcEEEEecCCCCCHH
Confidence 468999999999999998888999999987766778899999999999 9999999999976 45689999999999999
Q ss_pred hhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCCC-----C
Q 006677 423 TLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA-----T 497 (635)
Q Consensus 423 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~~-----~ 497 (635)
+++.... ...+++..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+|||++....... .
T Consensus 96 ~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 169 (279)
T 1qpc_A 96 DFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG 169 (279)
T ss_dssp HHTTSHH---HHTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCTT
T ss_pred HHHhcCC---CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHhhEEEcCCCCEEECCCcccccccCcccccccC
Confidence 9997432 124899999999999999999999998 9999999999999999999999999997654322 2
Q ss_pred CCCCCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcccCh
Q 006677 498 PSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNI 576 (635)
Q Consensus 498 ~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 576 (635)
..++..|+|||++.+..++.++||||||+++|||++ |+.||...... .....+. ...... ..
T Consensus 170 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~------~~~~~~~-~~~~~~-------~~--- 232 (279)
T 1qpc_A 170 AKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP------EVIQNLE-RGYRMV-------RP--- 232 (279)
T ss_dssp CCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH------HHHHHHH-TTCCCC-------CC---
T ss_pred CCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHH------HHHHHHh-cccCCC-------Cc---
Confidence 335678999999998889999999999999999999 99999754321 1122211 111100 01
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhccCC
Q 006677 577 EEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDS 616 (635)
Q Consensus 577 ~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~~~~~ 616 (635)
......+.+++.+|++.+|++|||+.++++.|+++.....
T Consensus 233 ~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~ 272 (279)
T 1qpc_A 233 DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATE 272 (279)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC-
T ss_pred ccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHhcc
Confidence 1122456778889999999999999999999999986644
No 82
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=3.7e-40 Score=346.40 Aligned_cols=193 Identities=21% Similarity=0.337 Sum_probs=169.8
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccCChHHHHHHHHHHHhhc----CCCceeceeEEEEeCCeeEEEEEecc
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVGKRDFEQQMEIVGRVG----QHPNVVPLRAYYYSKDEKLLVYDYFA 417 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~----~h~niv~l~~~~~~~~~~~lv~e~~~ 417 (635)
.++||+|+||+||+|... +++.||||+++........+..|++++..+. .||||+++++++...+..++||||+
T Consensus 40 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~- 118 (360)
T 3llt_A 40 IRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFEPL- 118 (360)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECSCHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEEEEECCC-
T ss_pred EEEEcccCCeEEEEEEECCCCeEEEEEEeccchhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCeeEEEEcCC-
Confidence 468999999999999974 5788999999765444567788999999984 4999999999999999999999999
Q ss_pred CCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcC--------------------
Q 006677 418 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQ-------------------- 477 (635)
Q Consensus 418 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~-------------------- 477 (635)
+++|.+++.... ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.
T Consensus 119 ~~~L~~~~~~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~ 192 (360)
T 3llt_A 119 GPSLYEIITRNN---YNGFHIEDIKLYCIEILKALNYLRKMS---LTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQ 192 (360)
T ss_dssp CCBHHHHHHHTT---TCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEE
T ss_pred CCCHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCcccEEEccccccccccchhccccccccc
Confidence 889999997543 234899999999999999999999998 999999999999975
Q ss_pred -----CCCeEEeecCCCCCCCCC-CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCC
Q 006677 478 -----DLDGCISDFGLTPLMNVP-ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPT 542 (635)
Q Consensus 478 -----~~~~ki~DfGla~~~~~~-~~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~ 542 (635)
++.+||+|||++...... ....+|+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 193 ~~~~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~ 263 (360)
T 3llt_A 193 IYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHE 263 (360)
T ss_dssp EEEESCCCEEECCCTTCEETTSCCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred ccccCCCCEEEEeccCceecCCCCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCCc
Confidence 789999999999765443 34567899999999999999999999999999999999999997643
No 83
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=3.5e-39 Score=347.06 Aligned_cols=242 Identities=20% Similarity=0.311 Sum_probs=194.9
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccCC---hHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEeccC
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS 418 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~ 418 (635)
.+.||+|+||+||+|... +++.+|+|++...... .+.+.+|+++++++ +||||+++++++.+++..++||||+++
T Consensus 16 ~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~lv~E~~~g 94 (444)
T 3soa_A 16 FEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLL-KHPNIVRLHDSISEEGHHYLIFDLVTG 94 (444)
T ss_dssp EEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHC-CBTTBCCEEEEEECSSEEEEEECCCBC
T ss_pred EEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhC-CCcCCCeEEEEEEECCEEEEEEEeCCC
Confidence 578999999999999864 5788999998765432 35688999999999 999999999999999999999999999
Q ss_pred CChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEc---CCCCeEEeecCCCCCCCCC
Q 006677 419 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLIN---QDLDGCISDFGLTPLMNVP 495 (635)
Q Consensus 419 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~---~~~~~ki~DfGla~~~~~~ 495 (635)
|+|.+.+... ..+++..+..++.||+.||+|||+++ |+||||||+|||++ +++.+||+|||++......
T Consensus 95 g~L~~~i~~~-----~~~~e~~~~~i~~qil~aL~~lH~~g---ivHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~ 166 (444)
T 3soa_A 95 GELFEDIVAR-----EYYSEADASHCIQQILEAVLHCHQMG---VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGE 166 (444)
T ss_dssp CBHHHHHHHC-----SCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTT
T ss_pred CCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEeccCCCCcEEEccCceeEEecCC
Confidence 9999998743 34899999999999999999999998 99999999999998 4678999999999776543
Q ss_pred C----CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhh
Q 006677 496 A----TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELM 571 (635)
Q Consensus 496 ~----~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 571 (635)
. ...||+.|+|||++.+..++.++||||+||++|||++|..||..... ......+....... ...
T Consensus 167 ~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~------~~~~~~i~~~~~~~-----~~~ 235 (444)
T 3soa_A 167 QQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQ------HRLYQQIKAGAYDF-----PSP 235 (444)
T ss_dssp CCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSH------HHHHHHHHHTCCCC-----CTT
T ss_pred CceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccH------HHHHHHHHhCCCCC-----Ccc
Confidence 2 34689999999999999999999999999999999999999975432 11222222221110 000
Q ss_pred cccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006677 572 RFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 572 ~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 607 (635)
.... ....+.+++.+|++.||++|||+.|++++
T Consensus 236 ~~~~---~s~~~~~li~~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 236 EWDT---VTPEAKDLINKMLTINPSKRITAAEALKH 268 (444)
T ss_dssp TTTT---SCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred cccc---CCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 1111 22356677789999999999999999983
No 84
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=1.2e-38 Score=325.08 Aligned_cols=255 Identities=17% Similarity=0.168 Sum_probs=199.2
Q ss_pred hccccccCceEEEEEEe-cCCCeEEEEEeecccCChHHHHHHHHHHHhhcCCCceeceeE-EEEeCCeeEEEEEeccCCC
Q 006677 343 AEVLGKGSYGTAYKAVL-EESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRA-YYYSKDEKLLVYDYFASGS 420 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~-~~~~~~~~~lv~e~~~~g~ 420 (635)
.+.||+|+||.||+|.. .+++.||+|++.... ..+.+.+|++++.++ +|++++..+. +....+..++||||+ +++
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~l~~l-~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~ 90 (296)
T 3uzp_A 14 GRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-KHPQLHIESKIYKMM-QGGVGIPTIRWCGAEGDYNVMVMELL-GPS 90 (296)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEEEEEESCS-SCCHHHHHHHHHHHH-TTSTTCCCEEEEEEETTEEEEEEECC-CCB
T ss_pred EEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc-chhHHHHHHHHHHHh-hcCCCCCccccccCCCCceEEEEEec-CCC
Confidence 46799999999999996 568899999986543 345789999999999 5655444444 446677889999999 899
Q ss_pred hhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEE---cCCCCeEEeecCCCCCCCCC--
Q 006677 421 LSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLI---NQDLDGCISDFGLTPLMNVP-- 495 (635)
Q Consensus 421 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll---~~~~~~ki~DfGla~~~~~~-- 495 (635)
|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||++ ++++.+||+|||++......
T Consensus 91 L~~~~~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~ 163 (296)
T 3uzp_A 91 LEDLFNFCS----RKFSLKTVLLLADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDART 163 (296)
T ss_dssp HHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTT
T ss_pred HHHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccccc
Confidence 999997432 34999999999999999999999998 9999999999999 48899999999998765432
Q ss_pred ---------CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccc
Q 006677 496 ---------ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVF 566 (635)
Q Consensus 496 ---------~~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 566 (635)
....+++.|+|||++.+..++.++|||||||++|||++|+.||......+.......+.........
T Consensus 164 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~---- 239 (296)
T 3uzp_A 164 HQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI---- 239 (296)
T ss_dssp CCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCH----
T ss_pred ccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCch----
Confidence 2335788999999999999999999999999999999999999876544433322221111100000
Q ss_pred hhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhccCCC
Q 006677 567 DVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSE 617 (635)
Q Consensus 567 d~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~~~~~~ 617 (635)
. .. .. .....+.+++.+||+.||++|||++|+++.|+++......
T Consensus 240 ~-~~--~~---~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~ 284 (296)
T 3uzp_A 240 E-VL--CK---GYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGF 284 (296)
T ss_dssp H-HH--TT---TSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred H-HH--Hh---hCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcCC
Confidence 0 00 01 1124577788899999999999999999999999876643
No 85
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=2.8e-39 Score=325.26 Aligned_cols=248 Identities=24% Similarity=0.377 Sum_probs=199.8
Q ss_pred hccccccCceEEEEEEecCCCeEEEEEeecccCC---hHHHHHHHHHHHhhcCCCceeceeEEEEeC--CeeEEEEEecc
Q 006677 343 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSK--DEKLLVYDYFA 417 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~--~~~~lv~e~~~ 417 (635)
.+.||+|+||+||+|... ++.||+|+++..... .+.+.+|+.++.++ +||||+++++++... ...++||||++
T Consensus 15 ~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~lv~e~~~ 92 (271)
T 3kmu_A 15 LTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIF-SHPNVLPVLGACQSPPAPHPTLITHWMP 92 (271)
T ss_dssp EEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCC-SCTTEECEEEEECTTTSSSCEEEEECCT
T ss_pred HHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhc-CCCchhheEEEEccCCCCCeEeeecccC
Confidence 468999999999999986 788999999865433 35688899999998 899999999999877 67899999999
Q ss_pred CCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCCCC
Q 006677 418 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPAT 497 (635)
Q Consensus 418 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~~~ 497 (635)
+|+|.++++... ...+++..+..++.|++.||+|||+.+ ++++||||||+||+++.++.++|+|||++..... ..
T Consensus 93 ~~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~-~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~-~~ 167 (271)
T 3kmu_A 93 YGSLYNVLHEGT---NFVVDQSQAVKFALDMARGMAFLHTLE-PLIPRHALNSRSVMIDEDMTARISMADVKFSFQS-PG 167 (271)
T ss_dssp TCBHHHHHHSCS---SCCCCHHHHHHHHHHHHHHHHHHTTSS-SCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSC-TT
T ss_pred CCcHHHHHhhcc---cCCCCHHHHHHHHHHHHHHHHHHhcCC-CceecCCCccceEEEcCCcceeEEeccceeeecc-cC
Confidence 999999998543 235899999999999999999999975 5699999999999999999999999988765432 34
Q ss_pred CCCCCcccCcccccCCCCCC---ccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhccc
Q 006677 498 PSRSAGYRAPEVIETRKHSH---KSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQ 574 (635)
Q Consensus 498 ~~~~~~y~aPE~~~~~~~~~---k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 574 (635)
..+|+.|+|||++.+..++. ++||||||+++|||++|+.||..... ................
T Consensus 168 ~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~------~~~~~~~~~~~~~~~~--------- 232 (271)
T 3kmu_A 168 RMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSN------MEIGMKVALEGLRPTI--------- 232 (271)
T ss_dssp CBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCH------HHHHHHHHHSCCCCCC---------
T ss_pred ccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccCh------HHHHHHHHhcCCCCCC---------
Confidence 45788999999998766554 79999999999999999999975432 1122222222211111
Q ss_pred ChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhc
Q 006677 575 NIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQ 613 (635)
Q Consensus 575 ~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~~ 613 (635)
.......+.+++.+||+.||++|||++|+++.|+++.+
T Consensus 233 -~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 233 -PPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp -CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred -CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 01123356778889999999999999999999999864
No 86
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=8.1e-40 Score=332.81 Aligned_cols=248 Identities=23% Similarity=0.337 Sum_probs=196.0
Q ss_pred hccccccCceEEEEEEecC-C-------CeEEEEEeeccc-CChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEE
Q 006677 343 AEVLGKGSYGTAYKAVLEE-S-------TTVVVKRLKEVV-VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVY 413 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~~-~-------~~vavK~l~~~~-~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~ 413 (635)
.+.||+|+||+||+|.... + ..||+|++.... ...+.+.+|++++.++ +||||+++++++..++..++||
T Consensus 13 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~ 91 (289)
T 4fvq_A 13 NESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKL-SHKHLVLNYGVCVCGDENILVQ 91 (289)
T ss_dssp EEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTS-CCTTBCCEEEEECCTTCCEEEE
T ss_pred eeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhC-CCCCEeEEEEEEEeCCCCEEEE
Confidence 4689999999999998654 2 469999986553 3356789999999999 8999999999999999999999
Q ss_pred EeccCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCC--------eEEee
Q 006677 414 DYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLD--------GCISD 485 (635)
Q Consensus 414 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~--------~ki~D 485 (635)
||+++|+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++. +||+|
T Consensus 92 e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~D 164 (289)
T 4fvq_A 92 EFVKFGSLDTYLKKNK----NCINILWKLEVAKQLAAAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSD 164 (289)
T ss_dssp ECCTTCBHHHHHHHTG----GGCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEEECCBGGGTBCCEEEECC
T ss_pred ECCCCCCHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHhhCC---eECCCcCcceEEEecCCcccccccceeeecc
Confidence 9999999999997532 33899999999999999999999998 999999999999998887 99999
Q ss_pred cCCCCCCCCCCCCCCCCcccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccc
Q 006677 486 FGLTPLMNVPATPSRSAGYRAPEVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAE 564 (635)
Q Consensus 486 fGla~~~~~~~~~~~~~~y~aPE~~~~-~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 564 (635)
||++..........+++.|+|||++.+ ..++.++||||||+++|||++|..|+.... +...............
T Consensus 165 fg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~-----~~~~~~~~~~~~~~~~- 238 (289)
T 4fvq_A 165 PGISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSAL-----DSQRKLQFYEDRHQLP- 238 (289)
T ss_dssp CCSCTTTSCHHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTS-----CHHHHHHHHHTTCCCC-
T ss_pred CcccccccCccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCcccc-----chHHHHHHhhccCCCC-
Confidence 999977654444457888999999987 678999999999999999999655543221 1111111111100000
Q ss_pred cchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhccCC
Q 006677 565 VFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDS 616 (635)
Q Consensus 565 ~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~~~~~ 616 (635)
. .....+.+++.+||+.||++|||+.|++++|+++.....
T Consensus 239 ---------~---~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~~ 278 (289)
T 4fvq_A 239 ---------A---PKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDL 278 (289)
T ss_dssp ---------C---CSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC----
T ss_pred ---------C---CCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCC
Confidence 0 012246678889999999999999999999999886543
No 87
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=7.6e-40 Score=338.68 Aligned_cols=255 Identities=23% Similarity=0.392 Sum_probs=190.8
Q ss_pred hccccccCceEEEEEEecCCC----eEEEEEeecccC---ChHHHHHHHHHHHhhcCCCceeceeEEEEeCCee------
Q 006677 343 AEVLGKGSYGTAYKAVLEEST----TVVVKRLKEVVV---GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEK------ 409 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~~~~----~vavK~l~~~~~---~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~------ 409 (635)
.+.||+|+||+||+|....+. .||||+++.... ..+.+.+|+++++++ +||||+++++++...+..
T Consensus 28 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~~ 106 (323)
T 3qup_A 28 GRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEF-DHPHVAKLVGVSLRSRAKGRLPIP 106 (323)
T ss_dssp EEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTC-CCTTBCCCCEEEECC-------CE
T ss_pred eceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHC-CCCceehhhceeeccccccCCCcc
Confidence 578999999999999976433 799999976532 246788999999999 999999999999877655
Q ss_pred EEEEEeccCCChhhhccCCCC-CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCC
Q 006677 410 LLVYDYFASGSLSTLLHGNRG-AGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGL 488 (635)
Q Consensus 410 ~lv~e~~~~g~L~~~l~~~~~-~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGl 488 (635)
++||||+++|+|.+++..... .....+++..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+|||+
T Consensus 107 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~---ivH~Dikp~NIli~~~~~~kl~Dfg~ 183 (323)
T 3qup_A 107 MVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRN---FIHRDLAARNCMLAEDMTVCVADFGL 183 (323)
T ss_dssp EEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTSCEEECCCCC
T ss_pred EEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCC---cccCCCCcceEEEcCCCCEEEeeccc
Confidence 999999999999999864331 12235899999999999999999999998 99999999999999999999999999
Q ss_pred CCCCCCCC------CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhcc
Q 006677 489 TPLMNVPA------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEW 561 (635)
Q Consensus 489 a~~~~~~~------~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 561 (635)
++...... ...+++.|+|||.+.+..++.++|||||||++|||++ |..||......+ ..........
T Consensus 184 a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~------~~~~~~~~~~ 257 (323)
T 3qup_A 184 SRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAE------IYNYLIGGNR 257 (323)
T ss_dssp -----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG------HHHHHHTTCC
T ss_pred cccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHH------HHHHHhcCCC
Confidence 97654322 2234667999999999999999999999999999999 999998654322 1111111111
Q ss_pred ccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhccCCCC
Q 006677 562 TAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSEN 618 (635)
Q Consensus 562 ~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~~~~~~~ 618 (635)
. .........+.+++.+||+.||++|||+.|+++.|+++.......
T Consensus 258 ~-----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~~ 303 (323)
T 3qup_A 258 L-----------KQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVL 303 (323)
T ss_dssp C-----------CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC----
T ss_pred C-----------CCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhhc
Confidence 0 011122345778888999999999999999999999999877543
No 88
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=2e-39 Score=333.75 Aligned_cols=237 Identities=22% Similarity=0.323 Sum_probs=187.2
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccCCh---HHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEeccC
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVGK---RDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS 418 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~---~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~ 418 (635)
.++||+|+||+||+|... +++.||||++....... ..+..|+..+.++.+|+||+++++++.+.+..++||||+ +
T Consensus 62 ~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~e~~-~ 140 (311)
T 3p1a_A 62 LSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELC-G 140 (311)
T ss_dssp EEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC-C
T ss_pred eheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEEecc-C
Confidence 568999999999999976 68899999987654332 344556666666668999999999999999999999999 6
Q ss_pred CChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCC---
Q 006677 419 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP--- 495 (635)
Q Consensus 419 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~--- 495 (635)
++|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 141 ~~L~~~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~~~ 213 (311)
T 3p1a_A 141 PSLQQHCEAWG----ASLPEAQVWGYLRDTLLALAHLHSQG---LVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAG 213 (311)
T ss_dssp CBHHHHHHHHC----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECGGGCEEECCCTTCEECC-----
T ss_pred CCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEECCCCCEEEccceeeeecccCCCC
Confidence 69988886532 34999999999999999999999998 999999999999999999999999998766433
Q ss_pred CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcccC
Q 006677 496 ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQN 575 (635)
Q Consensus 496 ~~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 575 (635)
....+|+.|+|||++.+ .++.++|||||||++|||++|..|+.... .| .. +.... ......
T Consensus 214 ~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~--------~~-~~-~~~~~----~~~~~~---- 274 (311)
T 3p1a_A 214 EVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGE--------GW-QQ-LRQGY----LPPEFT---- 274 (311)
T ss_dssp -CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHH--------HH-HH-HTTTC----CCHHHH----
T ss_pred cccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCcc--------HH-HH-HhccC----CCcccc----
Confidence 23457899999999876 78999999999999999999977765321 11 11 11111 111110
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006677 576 IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 576 ~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 607 (635)
......+.+++.+||+.||++|||++|++++
T Consensus 275 -~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 305 (311)
T 3p1a_A 275 -AGLSSELRSVLVMMLEPDPKLRATAEALLAL 305 (311)
T ss_dssp -TTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred -cCCCHHHHHHHHHHcCCChhhCcCHHHHHhC
Confidence 1123457788889999999999999999863
No 89
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=1.3e-39 Score=339.41 Aligned_cols=238 Identities=22% Similarity=0.354 Sum_probs=195.0
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeeccc----CChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEecc
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVV----VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 417 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 417 (635)
.+.||+|+||.||+|+.+ +++.||+|+++... .....+..|.+++..+.+||||+++++++.+.+..++||||++
T Consensus 22 ~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~ 101 (345)
T 1xjd_A 22 HKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLN 101 (345)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEEEEeCCC
Confidence 468999999999999976 47889999997642 2345677888898887799999999999999999999999999
Q ss_pred CCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCC---
Q 006677 418 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV--- 494 (635)
Q Consensus 418 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~--- 494 (635)
+|+|.+++... ..+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++....
T Consensus 102 gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~ 173 (345)
T 1xjd_A 102 GGDLMYHIQSC-----HKFDLSRATFYAAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDA 173 (345)
T ss_dssp TCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTC
T ss_pred CCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCChhhEEECCCCCEEEeEChhhhhcccCCC
Confidence 99999999743 24899999999999999999999998 99999999999999999999999999976432
Q ss_pred -CCCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcc
Q 006677 495 -PATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRF 573 (635)
Q Consensus 495 -~~~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 573 (635)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...+.. .....+...... + .
T Consensus 174 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~------~~~~~i~~~~~~---~------p 238 (345)
T 1xjd_A 174 KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEE------ELFHSIRMDNPF---Y------P 238 (345)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHCCCC---C------C
T ss_pred cccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHH------HHHHHHHhCCCC---C------C
Confidence 23446899999999999999999999999999999999999999754321 122222211110 0 0
Q ss_pred cChHHHHHHHHHHHHHcccCCCCCCCCHH-HHHH
Q 006677 574 QNIEEEMVQMLQIGMACVAKVPDMRPNMD-EVVR 606 (635)
Q Consensus 574 ~~~~~~~~~l~~l~~~cl~~~P~~RPs~~-evl~ 606 (635)
. .....+.+++.+|++.||++||++. |+++
T Consensus 239 ~---~~s~~~~~li~~lL~~dp~~R~~~~~~i~~ 269 (345)
T 1xjd_A 239 R---WLEKEAKDLLVKLFVREPEKRLGVRGDIRQ 269 (345)
T ss_dssp T---TSCHHHHHHHHHHSCSSGGGSBTTBSCGGG
T ss_pred c---ccCHHHHHHHHHHhcCCHhHcCCChHHHHc
Confidence 1 1123566778899999999999998 6654
No 90
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=1.1e-39 Score=330.47 Aligned_cols=246 Identities=22% Similarity=0.373 Sum_probs=189.7
Q ss_pred hccccccCceEEEEEEecC----CCeEEEEEeecccC--ChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEec
Q 006677 343 AEVLGKGSYGTAYKAVLEE----STTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYF 416 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~~----~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~ 416 (635)
.+.||+|+||+||+|.... +..||+|+++.... ..+.+.+|+.++.++ +||||+++++++ .++..++||||+
T Consensus 20 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~-~~~~~~lv~e~~ 97 (281)
T 1mp8_A 20 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQF-DHPHIVKLIGVI-TENPVWIIMELC 97 (281)
T ss_dssp EEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTC-CCTTBCCEEEEE-CSSSCEEEEECC
T ss_pred EeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhC-CCCccceEEEEE-ccCccEEEEecC
Confidence 5789999999999999753 34689998865432 245688999999999 899999999997 456789999999
Q ss_pred cCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCCC
Q 006677 417 ASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA 496 (635)
Q Consensus 417 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~~ 496 (635)
++|+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 98 ~~~~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 170 (281)
T 1mp8_A 98 TLGELRSFLQVRK----YSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 170 (281)
T ss_dssp TTEEHHHHHHHTT----TTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECC-----------
T ss_pred CCCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHhCC---eecccccHHHEEECCCCCEEECccccccccCccc
Confidence 9999999997532 34899999999999999999999998 9999999999999999999999999997764432
Q ss_pred -----CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhh
Q 006677 497 -----TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVEL 570 (635)
Q Consensus 497 -----~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 570 (635)
...+++.|+|||++.+..++.++||||||+++|||++ |..||......+ . ...+......
T Consensus 171 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~---~---~~~i~~~~~~-------- 236 (281)
T 1mp8_A 171 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND---V---IGRIENGERL-------- 236 (281)
T ss_dssp --------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG---H---HHHHHTTCCC--------
T ss_pred ccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHH---H---HHHHHcCCCC--------
Confidence 1234668999999998899999999999999999997 999998654322 1 1111111110
Q ss_pred hcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhcc
Q 006677 571 MRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQS 614 (635)
Q Consensus 571 ~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~~~ 614 (635)
.........+.+++.+||+.||++|||+.|++++|+++.+.
T Consensus 237 ---~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 277 (281)
T 1mp8_A 237 ---PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 277 (281)
T ss_dssp ---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ---CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 00112234567788899999999999999999999998764
No 91
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=4.1e-39 Score=336.52 Aligned_cols=242 Identities=24% Similarity=0.368 Sum_probs=197.0
Q ss_pred hccccccCceEEEEEEe-cCCCeEEEEEeecccCC----hHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEecc
Q 006677 343 AEVLGKGSYGTAYKAVL-EESTTVVVKRLKEVVVG----KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 417 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~----~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 417 (635)
.+.||+|+||+||+|.. .+++.||||++...... .+.+.+|++++.++ +||||+++++++..++..++||||+.
T Consensus 59 ~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lv~e~~~ 137 (348)
T 1u5q_A 59 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL-RHPNTIQYRGCYLREHTAWLVMEYCL 137 (348)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred eeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEECCeEEEEEecCC
Confidence 46799999999999996 46888999999754322 24688999999999 99999999999999999999999997
Q ss_pred CCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCCCC
Q 006677 418 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPAT 497 (635)
Q Consensus 418 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~~~ 497 (635)
|+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++........
T Consensus 138 -g~l~~~l~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~ 209 (348)
T 1u5q_A 138 -GSASDLLEVHK----KPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANS 209 (348)
T ss_dssp -EEHHHHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCC
T ss_pred -CCHHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEeeccCceecCCCCc
Confidence 68888875432 34899999999999999999999998 99999999999999999999999999988776667
Q ss_pred CCCCCcccCccccc---CCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhccc
Q 006677 498 PSRSAGYRAPEVIE---TRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQ 574 (635)
Q Consensus 498 ~~~~~~y~aPE~~~---~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 574 (635)
..+|+.|+|||++. ...++.++|||||||++|||++|+.||..... ......+...... ... ..
T Consensus 210 ~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~------~~~~~~~~~~~~~-~~~------~~ 276 (348)
T 1u5q_A 210 FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA------MSALYHIAQNESP-ALQ------SG 276 (348)
T ss_dssp CCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH------HHHHHHHHHSCCC-CCC------CT
T ss_pred ccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh------HHHHHHHHhcCCC-CCC------CC
Confidence 78999999999984 56789999999999999999999999975431 1222222221111 000 01
Q ss_pred ChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 006677 575 NIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIE 609 (635)
Q Consensus 575 ~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~ 609 (635)
.....+.+++.+||+.||++|||++|++++-.
T Consensus 277 ---~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~~ 308 (348)
T 1u5q_A 277 ---HWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRF 308 (348)
T ss_dssp ---TSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHH
T ss_pred ---CCCHHHHHHHHHHcccChhhCcCHHHHhhChh
Confidence 11234667888999999999999999987543
No 92
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=3.7e-39 Score=335.26 Aligned_cols=258 Identities=25% Similarity=0.390 Sum_probs=203.9
Q ss_pred hhccccccCceEEEEEEec--------CCCeEEEEEeecccC--ChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEE
Q 006677 342 SAEVLGKGSYGTAYKAVLE--------ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLL 411 (635)
Q Consensus 342 ~~~~lG~G~fg~Vy~~~~~--------~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~l 411 (635)
..+.||+|+||+||+|... ++..||+|+++.... ..+.+.+|++++.++.+||||+++++++...+..++
T Consensus 39 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 118 (334)
T 2pvf_A 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYV 118 (334)
T ss_dssp EEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCCEE
T ss_pred EeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCCceEE
Confidence 3578999999999999863 467899999976432 235688999999999889999999999999999999
Q ss_pred EEEeccCCChhhhccCCCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCC
Q 006677 412 VYDYFASGSLSTLLHGNRGA-----------GRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLD 480 (635)
Q Consensus 412 v~e~~~~g~L~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~ 480 (635)
||||+++|+|.+++...... ....+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.
T Consensus 119 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~ 195 (334)
T 2pvf_A 119 IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLAARNVLVTENNV 195 (334)
T ss_dssp EEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCC
T ss_pred EEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCccceEEEcCCCC
Confidence 99999999999999765421 1234899999999999999999999998 999999999999999999
Q ss_pred eEEeecCCCCCCCCCC------CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHH
Q 006677 481 GCISDFGLTPLMNVPA------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWV 553 (635)
Q Consensus 481 ~ki~DfGla~~~~~~~------~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~ 553 (635)
+||+|||++....... ...+++.|+|||++.+..++.++||||||+++|||++ |..||...... ...
T Consensus 196 ~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~------~~~ 269 (334)
T 2pvf_A 196 MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE------ELF 269 (334)
T ss_dssp EEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHH------HHH
T ss_pred EEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHH------HHH
Confidence 9999999997654321 2235678999999998889999999999999999999 99999754321 111
Q ss_pred HHHhhhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhccCCCCC
Q 006677 554 QSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSENR 619 (635)
Q Consensus 554 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~~~~~~~~ 619 (635)
..+. ...... ........+.+++.+||+.+|++|||+.|+++.|+.+........
T Consensus 270 ~~~~-~~~~~~----------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~~~~~ 324 (334)
T 2pvf_A 270 KLLK-EGHRMD----------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTNEE 324 (334)
T ss_dssp HHHH-HTCCCC----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC---
T ss_pred HHHh-cCCCCC----------CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccccCc
Confidence 1111 111100 011223456778889999999999999999999999987665433
No 93
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=2.7e-39 Score=341.16 Aligned_cols=240 Identities=20% Similarity=0.302 Sum_probs=194.6
Q ss_pred hccccccCceEEEEEEecC-CCeEEEEEeeccc----CChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEecc
Q 006677 343 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVV----VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 417 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 417 (635)
.+.||+|+||.||+|.... ++.||+|++.... ...+.+.+|++++..+ +||||+++++++.+.+..++||||++
T Consensus 20 ~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~~~~~~lv~e~~~ 98 (384)
T 4fr4_A 20 LRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGL-EHPFLVNLWYSFQDEEDMFMVVDLLL 98 (384)
T ss_dssp EEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEEeCCEEEEEEecCC
Confidence 5789999999999999764 7789999987542 2346788999999999 99999999999999999999999999
Q ss_pred CCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCC--
Q 006677 418 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP-- 495 (635)
Q Consensus 418 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~-- 495 (635)
+|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 99 gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~ 170 (384)
T 4fr4_A 99 GGDLRYHLQQN-----VHFKEETVKLFICELVMALDYLQNQR---IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQ 170 (384)
T ss_dssp TEEHHHHHHTT-----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCTTCC
T ss_pred CCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCcHHHeEECCCCCEEEeccceeeeccCCCc
Confidence 99999999743 34899999999999999999999998 999999999999999999999999999865433
Q ss_pred -CCCCCCCcccCcccccC---CCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhh
Q 006677 496 -ATPSRSAGYRAPEVIET---RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELM 571 (635)
Q Consensus 496 -~~~~~~~~y~aPE~~~~---~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 571 (635)
....||+.|+|||++.. ..++.++|||||||++|||++|+.||....... .............
T Consensus 171 ~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~---~~~~~~~~~~~~~---------- 237 (384)
T 4fr4_A 171 ITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTS---SKEIVHTFETTVV---------- 237 (384)
T ss_dssp BCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSC---HHHHHHHHHHCCC----------
T ss_pred eeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCcc---HHHHHHHHhhccc----------
Confidence 34568999999999964 458999999999999999999999997544322 1111221111110
Q ss_pred cccChHHHHHHHHHHHHHcccCCCCCCCC-HHHHHH
Q 006677 572 RFQNIEEEMVQMLQIGMACVAKVPDMRPN-MDEVVR 606 (635)
Q Consensus 572 ~~~~~~~~~~~l~~l~~~cl~~~P~~RPs-~~evl~ 606 (635)
.........+.+++.+||+.||++||+ ++++.+
T Consensus 238 --~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 238 --TYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp --CCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred --CCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 001112345677888999999999999 677665
No 94
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=1.3e-39 Score=335.32 Aligned_cols=252 Identities=26% Similarity=0.393 Sum_probs=202.4
Q ss_pred hhccccccCceEEEEEEec------CCCeEEEEEeecccC--ChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEE
Q 006677 342 SAEVLGKGSYGTAYKAVLE------ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVY 413 (635)
Q Consensus 342 ~~~~lG~G~fg~Vy~~~~~------~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~ 413 (635)
..+.||+|+||.||+|... ++..||+|++..... ..+.+.+|++++.++ +||||+++++++...+..++||
T Consensus 27 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~ 105 (314)
T 2ivs_A 27 LGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQV-NHPHVIKLYGACSQDGPLLLIV 105 (314)
T ss_dssp EEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECSSSSCEEEE
T ss_pred eeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhC-CCCceeeEEEEEecCCceEEEE
Confidence 3578999999999999862 347899999975432 235688899999999 9999999999999999999999
Q ss_pred EeccCCChhhhccCCCCC-------------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeE
Q 006677 414 DYFASGSLSTLLHGNRGA-------------------GRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVL 474 (635)
Q Consensus 414 e~~~~g~L~~~l~~~~~~-------------------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIl 474 (635)
||+++|+|.+++...... ....+++..+..++.||+.||+|||+.+ |+||||||+||+
T Consensus 106 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dikp~NIl 182 (314)
T 2ivs_A 106 EYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK---LVHRDLAARNIL 182 (314)
T ss_dssp ECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEE
T ss_pred eecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCC---CcccccchheEE
Confidence 999999999999764321 1234899999999999999999999998 999999999999
Q ss_pred EcCCCCeEEeecCCCCCCCCCC------CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCC
Q 006677 475 INQDLDGCISDFGLTPLMNVPA------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMV 547 (635)
Q Consensus 475 l~~~~~~ki~DfGla~~~~~~~------~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~t-g~~p~~~~~~~~~~ 547 (635)
++.++.+||+|||++....... ...+++.|+|||++.+..++.++||||||+++|||++ |..||......+
T Consensus 183 i~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~-- 260 (314)
T 2ivs_A 183 VAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPER-- 260 (314)
T ss_dssp EETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG--
T ss_pred EcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH--
Confidence 9999999999999997654322 2235677999999998889999999999999999999 999997654322
Q ss_pred ChhHHHHHHhhhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhcc
Q 006677 548 DLPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQS 614 (635)
Q Consensus 548 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~~~ 614 (635)
+. ..+....... ........+.+++.+||+.||++||++.|++++|+++...
T Consensus 261 -~~----~~~~~~~~~~----------~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 312 (314)
T 2ivs_A 261 -LF----NLLKTGHRME----------RPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVK 312 (314)
T ss_dssp -HH----HHHHTTCCCC----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred -HH----HHhhcCCcCC----------CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhh
Confidence 11 1111111100 0112234567788899999999999999999999998764
No 95
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=6.1e-40 Score=333.79 Aligned_cols=253 Identities=24% Similarity=0.369 Sum_probs=192.3
Q ss_pred hccccccCceEEEEEEecCCCeEEEEEeecccC---ChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEeccCC
Q 006677 343 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVV---GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASG 419 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~---~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g 419 (635)
.+.||+|+||+||+|...+++.||+|++..... ..+.+.+|+++++++ +||||+++++++...+..++||||+++
T Consensus 7 ~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~- 84 (288)
T 1ob3_A 7 LEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKEL-KHSNIVKLYDVIHTKKRLVLVFEHLDQ- 84 (288)
T ss_dssp EEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGC-CCTTBCCEEEEEECSSCEEEEEECCSE-
T ss_pred hhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhc-CCCCEeeeeeEEccCCeEEEEEEecCC-
Confidence 467999999999999998899999999865432 246788999999999 899999999999999999999999986
Q ss_pred ChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCC----
Q 006677 420 SLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP---- 495 (635)
Q Consensus 420 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~---- 495 (635)
+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 85 ~l~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 157 (288)
T 1ob3_A 85 DLKKLLDVCE----GGLESVTAKSFLLQLLNGIAYCHDRR---VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY 157 (288)
T ss_dssp EHHHHHHTST----TCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-----
T ss_pred CHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEEeECccccccCcccccc
Confidence 9999887533 34899999999999999999999998 999999999999999999999999998654322
Q ss_pred CCCCCCCcccCcccccCC-CCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhh----cccc----ccc
Q 006677 496 ATPSRSAGYRAPEVIETR-KHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVRE----EWTA----EVF 566 (635)
Q Consensus 496 ~~~~~~~~y~aPE~~~~~-~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~----~~~ 566 (635)
....+|+.|+|||++.+. .++.++|||||||++|||++|+.||......+. +.. ....... .|.. ..+
T Consensus 158 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~ 234 (288)
T 1ob3_A 158 THEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQ--LMR-IFRILGTPNSKNWPNVTELPKY 234 (288)
T ss_dssp ----CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH--HHH-HHHHHCCCCTTTSTTGGGSTTC
T ss_pred ccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH--HHH-HHHHHCCCChhhchhhhccccc
Confidence 233578899999999764 589999999999999999999999975432110 111 1111100 0000 000
Q ss_pred hhhhhcc------cChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006677 567 DVELMRF------QNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 567 d~~~~~~------~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 607 (635)
+...... .........+.+++.+|++.||++|||++|++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 281 (288)
T 1ob3_A 235 DPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281 (288)
T ss_dssp CTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 1110000 0001123456778889999999999999999863
No 96
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=2.2e-41 Score=346.59 Aligned_cols=255 Identities=23% Similarity=0.368 Sum_probs=183.8
Q ss_pred hccccccCceEEEEEEecCCCeEEEEEeecccCChHHHHHHHHHHHhh-cCCCceeceeEEEEeCC----eeEEEEEecc
Q 006677 343 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRV-GQHPNVVPLRAYYYSKD----EKLLVYDYFA 417 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l-~~h~niv~l~~~~~~~~----~~~lv~e~~~ 417 (635)
.+.||+|+||+||+|... ++.||||++... ....+.+|.+++..+ .+||||+++++++.... ..++||||++
T Consensus 8 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~ 84 (303)
T 3gxj_A 8 QESIGKGRFGEVWRGKWR-GEEVAVKIFSSR--EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHE 84 (303)
T ss_dssp CEEEEECSSSEEEEC-CT-TSCEEEEECC-T--THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEEEEECCT
T ss_pred hhhccCCCCeEEEEEEEc-CcceEEEEeccc--chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEEEEeccC
Confidence 468999999999999875 889999998643 356677888888773 38999999999998876 7899999999
Q ss_pred CCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH--------hcCCCCceecCCCCCCeEEcCCCCeEEeecCCC
Q 006677 418 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIH--------SMGGPKFTHGNIKASNVLINQDLDGCISDFGLT 489 (635)
Q Consensus 418 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH--------~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla 489 (635)
+|+|.++++.. .+++..+..++.|++.||+||| +.+ |+||||||+|||++.++.+||+|||++
T Consensus 85 ~g~L~~~l~~~------~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~Nil~~~~~~~kl~DFg~a 155 (303)
T 3gxj_A 85 HGSLFDYLNRY------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA---IAHRDLKSKNILVKKNGTCCIADLGLA 155 (303)
T ss_dssp TCCHHHHHHHC------CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC-BCCCCC-
T ss_pred CCCHHHHHhcc------CcchHHHHHHHHHHHHHHHHHHHHHhhhccCCC---EeeCcCCHHHeEECCCCCEEEeecCcc
Confidence 99999999642 3788889999999999999999 776 999999999999999999999999999
Q ss_pred CCCCCCC--------CCCCCCcccCcccccCC------CCCCccchhhHHHHHHHHHhC----------CCCCCCCCCCC
Q 006677 490 PLMNVPA--------TPSRSAGYRAPEVIETR------KHSHKSDVYSFGVLLLEMLTG----------KAPLQSPTRDD 545 (635)
Q Consensus 490 ~~~~~~~--------~~~~~~~y~aPE~~~~~------~~~~k~Dvws~Gvvl~el~tg----------~~p~~~~~~~~ 545 (635)
....... ...+|+.|+|||++.+. .++.++|||||||++|||+|| ..||......+
T Consensus 156 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~~~~ 235 (303)
T 3gxj_A 156 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD 235 (303)
T ss_dssp CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC-C
T ss_pred eeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccCCCC
Confidence 7654332 22578999999999776 344689999999999999999 66665432221
Q ss_pred CCChhHHHHHHhhhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhccC
Q 006677 546 MVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 615 (635)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~~~~ 615 (635)
. ............. ....... .....+....+.+++.+||+.||++|||++|+++.|+++.+..
T Consensus 236 ~-~~~~~~~~~~~~~-~~~~~~~----~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~~ 299 (303)
T 3gxj_A 236 P-SVEEMRKVVCEQK-LRPNIPN----RWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp C-CCC-CHHHHTTSC-CCCCCCG----GGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC-
T ss_pred c-cHHHHHHHHHHhh-cCCCccc----cccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhhc
Confidence 1 0011111111111 1111111 1111355677889999999999999999999999999888654
No 97
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=1.7e-39 Score=345.65 Aligned_cols=241 Identities=22% Similarity=0.309 Sum_probs=194.9
Q ss_pred hccccccCceEEEEEEecC-CCeEEEEEeeccc----CChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEecc
Q 006677 343 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVV----VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 417 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 417 (635)
.++||+|+||+||+|+... ++.||+|++++.. .....+.+|+.++..+ +||||+++++++.+.+..|+||||++
T Consensus 74 ~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~~~~~~lV~E~~~ 152 (410)
T 3v8s_A 74 VKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA-NSPWVVQLFYAFQDDRYLYMVMEYMP 152 (410)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred EEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEECCEEEEEEeCCC
Confidence 4689999999999999764 7889999997532 2345588899999998 99999999999999999999999999
Q ss_pred CCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCC--
Q 006677 418 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP-- 495 (635)
Q Consensus 418 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~-- 495 (635)
+|+|.++++.. .+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 153 gg~L~~~l~~~------~~~e~~~~~~~~qi~~aL~~LH~~g---ivHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~~ 223 (410)
T 3v8s_A 153 GGDLVNLMSNY------DVPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGM 223 (410)
T ss_dssp TEEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCTTSE
T ss_pred CCcHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeeECCCCCEEEeccceeEeeccCCc
Confidence 99999999642 3899999999999999999999998 999999999999999999999999999766543
Q ss_pred ---CCCCCCCcccCcccccCCC----CCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchh
Q 006677 496 ---ATPSRSAGYRAPEVIETRK----HSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDV 568 (635)
Q Consensus 496 ---~~~~~~~~y~aPE~~~~~~----~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 568 (635)
.+..||+.|+|||++.+.. ++.++|||||||++|||++|+.||...+. ......+.......
T Consensus 224 ~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~------~~~~~~i~~~~~~~----- 292 (410)
T 3v8s_A 224 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL------VGTYSKIMNHKNSL----- 292 (410)
T ss_dssp EECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSH------HHHHHHHHTHHHHC-----
T ss_pred ccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCCh------hhHHHHHHhccccc-----
Confidence 2556899999999997665 78999999999999999999999975432 22222222211000
Q ss_pred hhhcccChHHHHHHHHHHHHHcccCCCCC--CCCHHHHHHH
Q 006677 569 ELMRFQNIEEEMVQMLQIGMACVAKVPDM--RPNMDEVVRM 607 (635)
Q Consensus 569 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~--RPs~~evl~~ 607 (635)
........ ...+.+++.+|++.+|++ ||+++|++++
T Consensus 293 ~~p~~~~~---s~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 293 TFPDDNDI---SKEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp CCCTTCCC---CHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred cCCCcccc---cHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 00011112 234566777999999988 9999999985
No 98
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=1.1e-39 Score=331.53 Aligned_cols=249 Identities=25% Similarity=0.400 Sum_probs=205.7
Q ss_pred hccccccCceEEEEEEecC-CCeEEEEEeecccCChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEeccCCCh
Q 006677 343 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSL 421 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 421 (635)
.+.||+|+||+||+|.... +..||+|++.......+.+.+|+++++++ +||||+++++++..++..++||||+++|+|
T Consensus 18 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 96 (288)
T 3kfa_A 18 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHPNLVQLLGVCTREPPFYIITEFMTYGNL 96 (288)
T ss_dssp EEESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTHHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSEEEEEECCTTEEH
T ss_pred EeecCCCCceeEEEeEecCCCEEEEEEecCcCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEccCCCEEEEEEcCCCCcH
Confidence 4689999999999999765 77899999987665667899999999999 899999999999999999999999999999
Q ss_pred hhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCCCC----
Q 006677 422 STLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPAT---- 497 (635)
Q Consensus 422 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~~~---- 497 (635)
.+++.... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++........
T Consensus 97 ~~~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~ 170 (288)
T 3kfa_A 97 LDYLRECN---RQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 170 (288)
T ss_dssp HHHHHHCC---TTTSCHHHHHHHHHHHHHHHHHHHHHT---CCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSEEET
T ss_pred HHHHHhcc---cCCccHhHHHHHHHHHHHHHHHHHHCC---ccCCCCCcceEEEcCCCCEEEccCccceeccCCcccccc
Confidence 99997543 345899999999999999999999998 99999999999999999999999999987654321
Q ss_pred -CCCCCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcccC
Q 006677 498 -PSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQN 575 (635)
Q Consensus 498 -~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 575 (635)
..+++.|+|||++.+..++.++||||||+++|||++ |..||......+ ... ........ ..
T Consensus 171 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~---~~~----~~~~~~~~----------~~ 233 (288)
T 3kfa_A 171 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ---VYE----LLEKDYRM----------ER 233 (288)
T ss_dssp TEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG---HHH----HHHTTCCC----------CC
T ss_pred CCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH---HHH----HHhccCCC----------CC
Confidence 224667999999998899999999999999999999 999997654222 111 11111110 00
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhccC
Q 006677 576 IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 615 (635)
Q Consensus 576 ~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~~~~ 615 (635)
.......+.+++.+|++.||++|||++|+++.|+.+.+..
T Consensus 234 ~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~~ 273 (288)
T 3kfa_A 234 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 273 (288)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHhc
Confidence 1122345678888999999999999999999999987653
No 99
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=9.6e-40 Score=344.34 Aligned_cols=253 Identities=25% Similarity=0.397 Sum_probs=193.5
Q ss_pred hccccccCceEEEEEEecC--C--CeEEEEEeecccC--ChHHHHHHHHHHHhhcCCCceeceeEEEEe-CCeeEEEEEe
Q 006677 343 AEVLGKGSYGTAYKAVLEE--S--TTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYS-KDEKLLVYDY 415 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~~--~--~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~-~~~~~lv~e~ 415 (635)
.+.||+|+||+||+|...+ + ..||+|.++.... ..+.+.+|+.+++++ +||||+++++++.. ++..++||||
T Consensus 94 ~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~~~lv~e~ 172 (373)
T 3c1x_A 94 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF-SHPNVLSLLGICLRSEGSPLVVLPY 172 (373)
T ss_dssp EEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTC-CCTTBCCCCEEECCCSSCCEEEEEC
T ss_pred CcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEEcCCCCeEEEEEC
Confidence 4689999999999998642 2 3588998865432 246788999999999 89999999999764 4578999999
Q ss_pred ccCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCC
Q 006677 416 FASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP 495 (635)
Q Consensus 416 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~ 495 (635)
+++|+|.++++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 173 ~~~g~L~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~ 245 (373)
T 3c1x_A 173 MKHGDLRNFIRNET----HNPTVKDLIGFGLQVAKGMKFLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 245 (373)
T ss_dssp CTTCBHHHHHHCTT----CCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred CCCCCHHHHHhhcc----cCCCHHHHHHHHHHHHHHHHHHHHCC---EecCccchheEEECCCCCEEEeecccccccccc
Confidence 99999999997532 34889999999999999999999998 999999999999999999999999999765332
Q ss_pred C--------CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccc
Q 006677 496 A--------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVF 566 (635)
Q Consensus 496 ~--------~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 566 (635)
. ...+++.|+|||++.+..++.++|||||||++|||+| |..||......+ .... .......
T Consensus 246 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~---~~~~---~~~~~~~---- 315 (373)
T 3c1x_A 246 EFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD---ITVY---LLQGRRL---- 315 (373)
T ss_dssp ------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSC---HHHH---HHTTCCC----
T ss_pred ccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHH---HHHH---HHcCCCC----
Confidence 1 2234667999999999999999999999999999999 677787544322 1111 1111100
Q ss_pred hhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhccCCCCCC
Q 006677 567 DVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSENRP 620 (635)
Q Consensus 567 d~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~~~~~~~~~ 620 (635)
.........+.+++.+||+.+|++|||+.|+++.|+++......+.+
T Consensus 316 -------~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~~~~~ 362 (373)
T 3c1x_A 316 -------LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEHY 362 (373)
T ss_dssp -------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCSCCB
T ss_pred -------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhccccce
Confidence 00111234577888899999999999999999999999977665443
No 100
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=2e-39 Score=342.06 Aligned_cols=247 Identities=21% Similarity=0.346 Sum_probs=194.9
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeeccc-CChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEeccCCC
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVV-VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGS 420 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 420 (635)
.+.||+|+||.||+|... +++.||+|+++... ...+.+.+|++++.++ +||||+++++++...+..++||||+++|+
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~lv~E~~~~~~ 172 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQL-DHANLIQLYDAFESKNDIVLVMEYVDGGE 172 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEEEECCTTCE
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhC-CCCCCCeEEEEEEECCEEEEEEeCCCCCc
Confidence 357999999999999964 58899999997653 2356789999999999 99999999999999999999999999999
Q ss_pred hhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEE--cCCCCeEEeecCCCCCCCCCC--
Q 006677 421 LSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLI--NQDLDGCISDFGLTPLMNVPA-- 496 (635)
Q Consensus 421 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll--~~~~~~ki~DfGla~~~~~~~-- 496 (635)
|.+++.... ..+++..+..++.||+.||+|||+.+ |+||||||+|||+ +.++.+||+|||+++......
T Consensus 173 L~~~l~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~ 245 (373)
T 2x4f_A 173 LFDRIIDES----YNLTELDTILFMKQICEGIRHMHQMY---ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKL 245 (373)
T ss_dssp EHHHHHHTG----GGCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBC
T ss_pred HHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEEecCCCCcEEEEeCCCceecCCcccc
Confidence 999886432 34899999999999999999999998 9999999999999 567889999999998765432
Q ss_pred -CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcccC
Q 006677 497 -TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQN 575 (635)
Q Consensus 497 -~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 575 (635)
...+|+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+....+... .. ....
T Consensus 246 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~------~~~~~~i~~~~~~~~--~~---~~~~ 314 (373)
T 2x4f_A 246 KVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDND------AETLNNILACRWDLE--DE---EFQD 314 (373)
T ss_dssp CCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSH------HHHHHHHHHTCCCSC--SG---GGTT
T ss_pred ccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHhccCCCC--hh---hhcc
Confidence 34588999999999998999999999999999999999999975432 222333333322111 00 1111
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHHHh
Q 006677 576 IEEEMVQMLQIGMACVAKVPDMRPNMDEVVR--MIEEV 611 (635)
Q Consensus 576 ~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~--~L~~~ 611 (635)
....+.+++.+|++.||++|||+.|+++ .+.+.
T Consensus 315 ---~~~~~~~li~~~L~~dp~~Rps~~e~l~hp~~~~~ 349 (373)
T 2x4f_A 315 ---ISEEAKEFISKLLIKEKSWRISASEALKHPWLSDH 349 (373)
T ss_dssp ---SCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHCH
T ss_pred ---CCHHHHHHHHHHcCCChhhCCCHHHHhcCcCcCCC
Confidence 2235667788999999999999999998 44433
No 101
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.8e-39 Score=361.04 Aligned_cols=247 Identities=23% Similarity=0.359 Sum_probs=199.7
Q ss_pred cccccCceEEEEEEec---CCCeEEEEEeeccc--CChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEeccCC
Q 006677 345 VLGKGSYGTAYKAVLE---ESTTVVVKRLKEVV--VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASG 419 (635)
Q Consensus 345 ~lG~G~fg~Vy~~~~~---~~~~vavK~l~~~~--~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g 419 (635)
.||+|+||.||+|.+. ++..||||+++... ...+++.+|++++.++ +||||+++++++.. +..++||||+++|
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l-~hpniv~l~~~~~~-~~~~lv~E~~~~g 420 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQL-DNPYIVRLIGVCQA-EALMLVMEMAGGG 420 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTC-CCTTBCCEEEEEES-SSEEEEEECCTTC
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhC-CCCCEeeEEEEecc-CCeEEEEEeCCCC
Confidence 6999999999999864 45679999997653 2467899999999999 99999999999976 5689999999999
Q ss_pred ChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCCCC--
Q 006677 420 SLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPAT-- 497 (635)
Q Consensus 420 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~~~-- 497 (635)
+|.+++... ...+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++.......
T Consensus 421 ~L~~~l~~~----~~~l~~~~~~~i~~qi~~~L~~LH~~~---iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 493 (613)
T 2ozo_A 421 PLHKFLVGK----REEIPVSNVAELLHQVSMGMKYLEEKN---FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYY 493 (613)
T ss_dssp BHHHHHTTC----TTTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCSTTTTCC------
T ss_pred cHHHHHhhc----cCCCCHHHHHHHHHHHHHHHHHHHHCC---EEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCcee
Confidence 999999743 234999999999999999999999998 99999999999999999999999999987643221
Q ss_pred -----CCCCCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhh
Q 006677 498 -----PSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELM 571 (635)
Q Consensus 498 -----~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 571 (635)
..+++.|+|||++.+..++.++|||||||++|||++ |+.||......+ ....+ ......
T Consensus 494 ~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~------~~~~i-~~~~~~-------- 558 (613)
T 2ozo_A 494 TARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE------VMAFI-EQGKRM-------- 558 (613)
T ss_dssp --------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHH------HHHHH-HTTCCC--------
T ss_pred eeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHH------HHHHH-HcCCCC--------
Confidence 123568999999999999999999999999999998 999998654322 11111 111111
Q ss_pred cccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhccCCC
Q 006677 572 RFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSE 617 (635)
Q Consensus 572 ~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~~~~~~ 617 (635)
.........+.+++.+||+.+|++||++.++++.|+.+......
T Consensus 559 --~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~~~ 602 (613)
T 2ozo_A 559 --ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLAS 602 (613)
T ss_dssp --CCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHHSC
T ss_pred --CCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHhcc
Confidence 11112335677888899999999999999999999998765543
No 102
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=9e-39 Score=326.04 Aligned_cols=254 Identities=17% Similarity=0.183 Sum_probs=197.5
Q ss_pred hccccccCceEEEEEEe-cCCCeEEEEEeecccCChHHHHHHHHHHHhhcCCCceec-eeEEEEeCCeeEEEEEeccCCC
Q 006677 343 AEVLGKGSYGTAYKAVL-EESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVP-LRAYYYSKDEKLLVYDYFASGS 420 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~-l~~~~~~~~~~~lv~e~~~~g~ 420 (635)
.+.||+|+||+||+|.. .+++.||+|++.... ....+.+|++++.++ +|++++. +..++...+..++||||+ +++
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~l~~l-~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~ 90 (296)
T 4hgt_A 14 GRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-KHPQLHIESKIYKMM-QGGVGIPTIRWCGAEGDYNVMVMELL-GPS 90 (296)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEEEEC----CCCHHHHHHHHHHH-TTSTTCCCEEEEEEETTEEEEEEECC-CCB
T ss_pred eeeecCCCCeEEEEEEEcCCCceEEEEeecccc-cchHHHHHHHHHHHh-cCCCCCCeeeeecCCCCceEEEEEcc-CCC
Confidence 56899999999999996 467889999876543 235688899999999 5555554 445556777889999999 999
Q ss_pred hhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEE---cCCCCeEEeecCCCCCCCCC--
Q 006677 421 LSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLI---NQDLDGCISDFGLTPLMNVP-- 495 (635)
Q Consensus 421 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll---~~~~~~ki~DfGla~~~~~~-- 495 (635)
|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||++ +.++.+||+|||+++.....
T Consensus 91 L~~~~~~~~----~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~ 163 (296)
T 4hgt_A 91 LEDLFNFCS----RKFSLKTVLLLADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDART 163 (296)
T ss_dssp HHHHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTT
T ss_pred HHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeeeeccCCCCeEEEecCccceeccCccc
Confidence 999997432 24999999999999999999999998 9999999999999 78999999999999765432
Q ss_pred ---------CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccc
Q 006677 496 ---------ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVF 566 (635)
Q Consensus 496 ---------~~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 566 (635)
....+++.|+|||++.+..++.++|||||||++|||++|+.||........................
T Consensus 164 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~---- 239 (296)
T 4hgt_A 164 HQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI---- 239 (296)
T ss_dssp CCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCH----
T ss_pred CccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccchh----
Confidence 2335788999999999999999999999999999999999999876554443332221111100000
Q ss_pred hhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhccCC
Q 006677 567 DVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDS 616 (635)
Q Consensus 567 d~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~~~~~ 616 (635)
.. ... .....+.+++.+||+.+|++|||++|+++.|+++.+...
T Consensus 240 ~~---~~~---~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~ 283 (296)
T 4hgt_A 240 EV---LCK---GYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG 283 (296)
T ss_dssp HH---HTT---TSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHT
T ss_pred hh---hhc---cCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhC
Confidence 00 000 112457788889999999999999999999999987654
No 103
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=2.1e-39 Score=337.22 Aligned_cols=267 Identities=23% Similarity=0.344 Sum_probs=193.7
Q ss_pred hccccccCceEEEEEEecCCCeEEEEEeecccCChHHHHHHHHHHH--hhcCCCceeceeEEEEeC-----CeeEEEEEe
Q 006677 343 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVG--RVGQHPNVVPLRAYYYSK-----DEKLLVYDY 415 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~--~l~~h~niv~l~~~~~~~-----~~~~lv~e~ 415 (635)
.+.||+|+||+||+|.. +++.||||++.... ...+..|.++.. .+ +||||+++++.+... ...++||||
T Consensus 18 ~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~--~~~~~~e~~~~~~~~~-~h~~i~~~~~~~~~~~~~~~~~~~lv~e~ 93 (336)
T 3g2f_A 18 LELIGRGRYGAVYKGSL-DERPVAVKVFSFAN--RQNFINEKNIYRVPLM-EHDNIARFIVGDERVTADGRMEYLLVMEY 93 (336)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG--HHHHHHHHHHHTSTTC-CCTTBCCEEEEEEEECTTSCEEEEEEECC
T ss_pred eeecccCCCeEEEEEEE-CCeEEEEEEeeccc--hhhHHHHHHHHHHHhc-cCcchhhheecccccccCCCceEEEEEec
Confidence 46899999999999987 47899999997543 344555555443 35 899999999876532 256899999
Q ss_pred ccCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc---------CCCCceecCCCCCCeEEcCCCCeEEeec
Q 006677 416 FASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSM---------GGPKFTHGNIKASNVLINQDLDGCISDF 486 (635)
Q Consensus 416 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~---------~~~~ivH~Dlk~~NIll~~~~~~ki~Df 486 (635)
+++|+|.+++... ..++..+..++.||+.||+|||+. + |+||||||+|||++.++.+||+||
T Consensus 94 ~~~g~L~~~l~~~------~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~---ivH~Dikp~Nill~~~~~~kL~DF 164 (336)
T 3g2f_A 94 YPNGSLXKYLSLH------TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPA---ISHRDLNSRNVLVKNDGTCVISDF 164 (336)
T ss_dssp CTTCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCC---EECSSCSGGGEEECTTSCEEECCC
T ss_pred CCCCcHHHHHhhc------ccchhHHHHHHHHHHHHHHHHHhhhccccccccc---eeecccccceEEEcCCCcEEEeec
Confidence 9999999999643 268999999999999999999998 6 999999999999999999999999
Q ss_pred CCCCCCCCC------------CCCCCCCcccCcccccC-------CCCCCccchhhHHHHHHHHHhCCCCCCCCCC-CCC
Q 006677 487 GLTPLMNVP------------ATPSRSAGYRAPEVIET-------RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTR-DDM 546 (635)
Q Consensus 487 Gla~~~~~~------------~~~~~~~~y~aPE~~~~-------~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~-~~~ 546 (635)
|+++..... ....+|+.|+|||++.+ ..++.++|||||||++|||++|..||..... .+.
T Consensus 165 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~ 244 (336)
T 3g2f_A 165 GLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEY 244 (336)
T ss_dssp TTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCC
T ss_pred cceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHH
Confidence 999765321 12347889999999986 4567789999999999999999777643322 221
Q ss_pred CCh----------hHHHHHHhhhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhccCC
Q 006677 547 VDL----------PRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDS 616 (635)
Q Consensus 547 ~~~----------~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~~~~~ 616 (635)
... ................+.. ...........+.+++.+||+.||++|||++|+++.|+++.....
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~ 321 (336)
T 3g2f_A 245 QMAFQTEVGNHPTFEDMQVLVSREKQRPKFPE---AWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWE 321 (336)
T ss_dssp CCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCT---TCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCC
T ss_pred HHhhhcccCCCchHHHHHhhhcccccCCCCCc---ccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHH
Confidence 111 0111111111111111111 111122355678889999999999999999999999999998887
Q ss_pred CCCCCCccC
Q 006677 617 ENRPSSEEN 625 (635)
Q Consensus 617 ~~~~~~~~~ 625 (635)
.+...+..+
T Consensus 322 ~~~~~~~~~ 330 (336)
T 3g2f_A 322 RNKSVSPTA 330 (336)
T ss_dssp C--------
T ss_pred hcccCCCcc
Confidence 765554433
No 104
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=1.9e-39 Score=332.30 Aligned_cols=252 Identities=24% Similarity=0.336 Sum_probs=196.8
Q ss_pred hccccccCceEEEEEEe-----cCCCeEEEEEeeccc--CChHHHHHHHHHHHhhcCCCceeceeEEEEeC--CeeEEEE
Q 006677 343 AEVLGKGSYGTAYKAVL-----EESTTVVVKRLKEVV--VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSK--DEKLLVY 413 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~-----~~~~~vavK~l~~~~--~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~--~~~~lv~ 413 (635)
.+.||+|+||.||+|.+ .+++.||+|++.... ...+.+.+|++++.++ +||||+++++++... ...++||
T Consensus 26 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~~lv~ 104 (302)
T 4e5w_A 26 IRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNL-YHENIVKYKGICTEDGGNGIKLIM 104 (302)
T ss_dssp EEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTC-CCTTBCCEEEEEEC---CCEEEEE
T ss_pred hhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhC-CCCCeeeeeeEEecCCCceEEEEE
Confidence 46899999999999984 357889999997543 2357789999999999 899999999999876 6689999
Q ss_pred EeccCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCC
Q 006677 414 DYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN 493 (635)
Q Consensus 414 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~ 493 (635)
||+++|+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++....
T Consensus 105 e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 177 (302)
T 4e5w_A 105 EFLPSGSLKEYLPKNK----NKINLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQVKIGDFGLTKAIE 177 (302)
T ss_dssp ECCTTCBHHHHHHHHT----TTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCCTTCEECC
T ss_pred EeCCCCcHHHHHHhcc----ccCCHHHHHHHHHHHHHHHHHhhcCC---cccCCCchheEEEcCCCCEEECccccccccc
Confidence 9999999999996433 34899999999999999999999998 9999999999999999999999999997664
Q ss_pred CCC-------CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCC--------CCCCChhHHHHHHhh
Q 006677 494 VPA-------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTR--------DDMVDLPRWVQSVVR 558 (635)
Q Consensus 494 ~~~-------~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~--------~~~~~~~~~~~~~~~ 558 (635)
... ...++..|+|||++.+..++.++||||||+++|||+||..|+..... ...............
T Consensus 178 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (302)
T 4e5w_A 178 TDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLK 257 (302)
T ss_dssp TTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHH
T ss_pred CCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHh
Confidence 332 23466779999999998999999999999999999999998753210 000000000111111
Q ss_pred hccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhh
Q 006677 559 EEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVR 612 (635)
Q Consensus 559 ~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~ 612 (635)
... ...........+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 258 ~~~----------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 258 EGK----------RLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp TTC----------CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ccC----------CCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 110 01111122346778888999999999999999999999876
No 105
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.5e-39 Score=328.73 Aligned_cols=253 Identities=23% Similarity=0.355 Sum_probs=198.6
Q ss_pred hccccccCceEEEEEEecCC-C---eEEEEEeecccC--ChHHHHHHHHHHHhhcCCCceeceeEEEEeCCee-EEEEEe
Q 006677 343 AEVLGKGSYGTAYKAVLEES-T---TVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEK-LLVYDY 415 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~~~-~---~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~-~lv~e~ 415 (635)
.++||+|+||+||+|.+.++ . .||+|++..... ..+.+.+|+++++++ +||||+++++++...+.. ++||||
T Consensus 26 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~v~e~ 104 (298)
T 3pls_A 26 DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGL-NHPNVLALIGIMLPPEGLPHVLLPY 104 (298)
T ss_dssp EEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTC-CCTTBCCCCEEECCSSSCCEEEECC
T ss_pred CceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhC-CCCCeeeEEEEEecCCCCcEEEEec
Confidence 47899999999999986432 2 689999875433 235688999999999 999999999999876665 999999
Q ss_pred ccCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCC
Q 006677 416 FASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP 495 (635)
Q Consensus 416 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~ 495 (635)
+.+|+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 105 ~~~~~L~~~~~~~~----~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~ 177 (298)
T 3pls_A 105 MCHGDLLQFIRSPQ----RNPTVKDLISFGLQVARGMEYLAEQK---FVHRDLAARNCMLDESFTVKVADFGLARDILDR 177 (298)
T ss_dssp CTTCBHHHHHHCTT----CCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTCCEEECCTTSSCTTTTG
T ss_pred ccCCCHHHHHhccc----cCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCcEEeCcCCCcccccCC
Confidence 99999999997532 34899999999999999999999998 999999999999999999999999999755321
Q ss_pred --------CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccch
Q 006677 496 --------ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFD 567 (635)
Q Consensus 496 --------~~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 567 (635)
....+++.|+|||.+.+..++.++||||||+++|||++|..|+...... .++.. ... .....
T Consensus 178 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~--~~~~~---~~~-~~~~~---- 247 (298)
T 3pls_A 178 EYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDP--FDLTH---FLA-QGRRL---- 247 (298)
T ss_dssp GGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCG--GGHHH---HHH-TTCCC----
T ss_pred cccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCH--HHHHH---Hhh-cCCCC----
Confidence 2234567899999999999999999999999999999966655422111 11111 111 11100
Q ss_pred hhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhccCCCCC
Q 006677 568 VELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSENR 619 (635)
Q Consensus 568 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~~~~~~~~ 619 (635)
.........+.+++.+||+.||++|||++|+++.|+++........
T Consensus 248 ------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~~~~ 293 (298)
T 3pls_A 248 ------PQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLGDH 293 (298)
T ss_dssp ------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCCSCC
T ss_pred ------CCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHhccc
Confidence 0011122356778889999999999999999999999987765543
No 106
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=5.4e-39 Score=335.89 Aligned_cols=242 Identities=21% Similarity=0.321 Sum_probs=182.4
Q ss_pred hccccccCceEEEEEEecC-CCeEEEEEeecccCChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEeccCCCh
Q 006677 343 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSL 421 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 421 (635)
.+.||+|+||.||+|.... ++.||||+++... ..+.+.+|++++.++ +||||+++++++...+..++||||+++|+|
T Consensus 58 ~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 135 (349)
T 2w4o_A 58 ESELGRGATSIVYRCKQKGTQKPYALKVLKKTV-DKKIVRTEIGVLLRL-SHPNIIKLKEIFETPTEISLVLELVTGGEL 135 (349)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEC-----------CHHHHHC-CCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred eeEEeeCCCEEEEEEEECCCCcEEEEEEeccch-hHHHHHHHHHHHHhC-CCCCCcceeeeEecCCeEEEEEEeCCCCCH
Confidence 4679999999999999864 6789999997643 356788899999999 899999999999999999999999999999
Q ss_pred hhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcC---CCCeEEeecCCCCCCCCC---
Q 006677 422 STLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQ---DLDGCISDFGLTPLMNVP--- 495 (635)
Q Consensus 422 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~---~~~~ki~DfGla~~~~~~--- 495 (635)
.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++. ++.+||+|||+++.....
T Consensus 136 ~~~l~~~-----~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~ 207 (349)
T 2w4o_A 136 FDRIVEK-----GYYSERDAADAVKQILEAVAYLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLM 207 (349)
T ss_dssp HHHHTTC-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEESSSSTTCCEEECCCC-----------
T ss_pred HHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCcccEEEecCCCCCCEEEccCccccccCccccc
Confidence 9999742 34899999999999999999999998 999999999999975 899999999999866443
Q ss_pred CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcccC
Q 006677 496 ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQN 575 (635)
Q Consensus 496 ~~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 575 (635)
....+|+.|+|||++.+..++.++|||||||++|||++|+.||......+ .....+....... ..+ .
T Consensus 208 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-----~~~~~i~~~~~~~--~~~------~ 274 (349)
T 2w4o_A 208 KTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQ-----FMFRRILNCEYYF--ISP------W 274 (349)
T ss_dssp -----CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHH-----HHHHHHHTTCCCC--CTT------T
T ss_pred ccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccH-----HHHHHHHhCCCcc--CCc------h
Confidence 23457899999999999999999999999999999999999997543211 1122222211110 000 0
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006677 576 IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 576 ~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 607 (635)
.......+.+++.+|++.||++|||+.|++++
T Consensus 275 ~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 306 (349)
T 2w4o_A 275 WDEVSLNAKDLVRKLIVLDPKKRLTTFQALQH 306 (349)
T ss_dssp TTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred hhhCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 01223456778889999999999999999873
No 107
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.6e-39 Score=334.36 Aligned_cols=249 Identities=25% Similarity=0.471 Sum_probs=195.9
Q ss_pred hccccccCceEEEEEEecCC-----CeEEEEEeecccC--ChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEe
Q 006677 343 AEVLGKGSYGTAYKAVLEES-----TTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDY 415 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~~~-----~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~ 415 (635)
.+.||+|+||+||+|..... ..||+|+++.... ....+.+|++++.++ +||||+++++++...+..++||||
T Consensus 49 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~ 127 (333)
T 1mqb_A 49 QKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQF-SHHNIIRLEGVISKYKPMMIITEY 127 (333)
T ss_dssp EEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEECSSSSEEEEEEC
T ss_pred ccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEecCCCcEEEEeC
Confidence 46899999999999986532 3599999875432 245688999999999 999999999999999999999999
Q ss_pred ccCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCC
Q 006677 416 FASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP 495 (635)
Q Consensus 416 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~ 495 (635)
+++|+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 128 ~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~ 200 (333)
T 1mqb_A 128 MENGALDKFLREKD----GEFSVLQLVGMLRGIAAGMKYLANMN---YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD 200 (333)
T ss_dssp CTTEEHHHHHHHTT----TCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCCCC-------
T ss_pred CCCCcHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChheEEECCCCcEEECCCCcchhhccc
Confidence 99999999997532 34899999999999999999999998 999999999999999999999999999776432
Q ss_pred C-------CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccch
Q 006677 496 A-------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFD 567 (635)
Q Consensus 496 ~-------~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 567 (635)
. ...+++.|+|||++.+..++.++||||||+++|||++ |+.||...... .....+. .....
T Consensus 201 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~------~~~~~~~-~~~~~---- 269 (333)
T 1mqb_A 201 PEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH------EVMKAIN-DGFRL---- 269 (333)
T ss_dssp ----------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH------HHHHHHH-TTCCC----
T ss_pred cccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHH------HHHHHHH-CCCcC----
Confidence 2 1124567999999999999999999999999999999 99999754321 1111111 11100
Q ss_pred hhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhccCC
Q 006677 568 VELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDS 616 (635)
Q Consensus 568 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~~~~~ 616 (635)
+........+.+++.+||+.+|++||++.|++++|+++.....
T Consensus 270 ------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~ 312 (333)
T 1mqb_A 270 ------PTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPD 312 (333)
T ss_dssp ------CCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGG
T ss_pred ------CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcch
Confidence 0111223456778889999999999999999999999886543
No 108
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=1.6e-39 Score=335.59 Aligned_cols=258 Identities=22% Similarity=0.346 Sum_probs=201.5
Q ss_pred hccccccCceEEEEEEec-----CCCeEEEEEeecccC--ChHHHHHHHHHHHhhcCCCceeceeEEEEeC--CeeEEEE
Q 006677 343 AEVLGKGSYGTAYKAVLE-----ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSK--DEKLLVY 413 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-----~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~--~~~~lv~ 413 (635)
.+.||+|+||+||++.+. +++.||||+++.... ..+.+.+|+++++++ +||||+++++++.+. ...++||
T Consensus 36 ~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~lv~ 114 (318)
T 3lxp_A 36 IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTL-YHEHIIKYKGCCEDAGAASLQLVM 114 (318)
T ss_dssp EEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTTTEEEEEE
T ss_pred hheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhC-CCcchhhEEEEEecCCCceEEEEE
Confidence 468999999999998753 578899999976532 245688999999999 899999999999884 5779999
Q ss_pred EeccCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCC
Q 006677 414 DYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN 493 (635)
Q Consensus 414 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~ 493 (635)
||+++|+|.+++... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++....
T Consensus 115 e~~~~~~L~~~l~~~------~~~~~~~~~i~~~l~~~l~~LH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~ 185 (318)
T 3lxp_A 115 EYVPLGSLRDYLPRH------SIGLAQLLLFAQQICEGMAYLHAQH---YIHRDLAARNVLLDNDRLVKIGDFGLAKAVP 185 (318)
T ss_dssp CCCTTCBHHHHGGGS------CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCGGGCEECC
T ss_pred ecccCCcHHHHHhhC------CCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCchheEEEcCCCCEEECCcccccccc
Confidence 999999999999743 3899999999999999999999998 9999999999999999999999999997765
Q ss_pred CCC-------CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCC-----CCC-h--hHHHHHHhh
Q 006677 494 VPA-------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDD-----MVD-L--PRWVQSVVR 558 (635)
Q Consensus 494 ~~~-------~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~-----~~~-~--~~~~~~~~~ 558 (635)
... ...++..|+|||++.+..++.++||||||+++|||+||..||....... ... . .........
T Consensus 186 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (318)
T 3lxp_A 186 EGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLE 265 (318)
T ss_dssp TTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHH
T ss_pred ccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHh
Confidence 432 2345677999999999889999999999999999999999987432100 000 0 000001111
Q ss_pred hccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhccCCCCCC
Q 006677 559 EEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSENRP 620 (635)
Q Consensus 559 ~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~~~~~~~~~ 620 (635)
... ...........+.+++.+||+.||++|||+.|+++.|+.+.+......|
T Consensus 266 ~~~----------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~~~~p 317 (318)
T 3lxp_A 266 RGE----------RLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQGQAP 317 (318)
T ss_dssp TTC----------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHC---
T ss_pred ccc----------CCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhccCCC
Confidence 100 1111122335677888899999999999999999999999876654443
No 109
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=1e-38 Score=339.19 Aligned_cols=261 Identities=23% Similarity=0.359 Sum_probs=197.2
Q ss_pred hcccccc--CceEEEEEEec-CCCeEEEEEeecccCC---hHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEec
Q 006677 343 AEVLGKG--SYGTAYKAVLE-ESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYF 416 (635)
Q Consensus 343 ~~~lG~G--~fg~Vy~~~~~-~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~ 416 (635)
.++||+| +||+||+|... +++.||||++...... .+.+.+|+++++++ +||||+++++++..++..++||||+
T Consensus 30 ~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~ 108 (389)
T 3gni_B 30 LTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLF-NHPNIVPYRATFIADNELWVVTSFM 108 (389)
T ss_dssp EEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEEECC
T ss_pred EecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhC-CCCCCCcEeEEEEECCEEEEEEEcc
Confidence 4689999 99999999976 5889999999866443 34677899999999 8999999999999999999999999
Q ss_pred cCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCC---
Q 006677 417 ASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN--- 493 (635)
Q Consensus 417 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~--- 493 (635)
++|+|.+++.... ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||.+....
T Consensus 109 ~~~~L~~~l~~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~ 182 (389)
T 3gni_B 109 AYGSAKDLICTHF---MDGMNELAIAYILQGVLKALDYIHHMG---YVHRSVKASHILISVDGKVYLSGLRSNLSMISHG 182 (389)
T ss_dssp TTCBHHHHHHHTC---TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCGGGCEECEETT
T ss_pred CCCCHHHHHhhhc---ccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEcccccceeecccc
Confidence 9999999997543 234899999999999999999999998 9999999999999999999999999874331
Q ss_pred --------CCCCCCCCCcccCcccccC--CCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhh-----
Q 006677 494 --------VPATPSRSAGYRAPEVIET--RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVR----- 558 (635)
Q Consensus 494 --------~~~~~~~~~~y~aPE~~~~--~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~----- 558 (635)
......+|+.|+|||++.+ ..++.++|||||||++|||++|+.||......+.. .........
T Consensus 183 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~--~~~~~~~~~~~~~~ 260 (389)
T 3gni_B 183 QRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQML--LEKLNGTVPCLLDT 260 (389)
T ss_dssp EECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHH--HHC-----------
T ss_pred ccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHH--HHHhcCCCCccccc
Confidence 1223357888999999987 67999999999999999999999999865433211 000000000
Q ss_pred -----hcc------------ccccch--------hhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HHHh
Q 006677 559 -----EEW------------TAEVFD--------VELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM--IEEV 611 (635)
Q Consensus 559 -----~~~------------~~~~~d--------~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~--L~~~ 611 (635)
+.. ...... ......+........+.+++.+||+.||++|||++|++++ ++.+
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~~~ 340 (389)
T 3gni_B 261 STIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQI 340 (389)
T ss_dssp ---------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGGGC
T ss_pred cccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHHHHH
Confidence 000 000000 0000000111223457888899999999999999999975 5554
Q ss_pred h
Q 006677 612 R 612 (635)
Q Consensus 612 ~ 612 (635)
.
T Consensus 341 ~ 341 (389)
T 3gni_B 341 K 341 (389)
T ss_dssp -
T ss_pred h
Confidence 4
No 110
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.8e-39 Score=326.97 Aligned_cols=248 Identities=23% Similarity=0.349 Sum_probs=200.6
Q ss_pred ccccccCceEEEEEEec---CCCeEEEEEeecccC--ChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEeccC
Q 006677 344 EVLGKGSYGTAYKAVLE---ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS 418 (635)
Q Consensus 344 ~~lG~G~fg~Vy~~~~~---~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~ 418 (635)
+.||+|+||.||+|.+. ++..||+|+++.... ..+.+.+|++++.++ +||||+++++++ ..+..++||||+++
T Consensus 16 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~-~~~~~~lv~e~~~~ 93 (287)
T 1u59_A 16 IELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQL-DNPYIVRLIGVC-QAEALMLVMEMAGG 93 (287)
T ss_dssp EEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEE-ESSSEEEEEECCTT
T ss_pred ccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhC-CCCCEeEEEEEe-cCCCcEEEEEeCCC
Confidence 47999999999999854 567799999976432 345688999999999 999999999999 55678999999999
Q ss_pred CChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCCC--
Q 006677 419 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA-- 496 (635)
Q Consensus 419 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~~-- 496 (635)
++|.+++... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 94 ~~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~ 166 (287)
T 1u59_A 94 GPLHKFLVGK----REEIPVSNVAELLHQVSMGMKYLEEKN---FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSY 166 (287)
T ss_dssp EEHHHHHTTC----TTTSCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCE
T ss_pred CCHHHHHHhC----CccCCHHHHHHHHHHHHHHHHHHHHCC---EeeCCCchheEEEcCCCCEEECcccceeeeccCcce
Confidence 9999999643 234899999999999999999999998 9999999999999999999999999997654321
Q ss_pred -----CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhh
Q 006677 497 -----TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVEL 570 (635)
Q Consensus 497 -----~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 570 (635)
...+++.|+|||++.+..++.++||||||+++|||++ |+.||......+ ....+..... .
T Consensus 167 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~------~~~~i~~~~~-~------- 232 (287)
T 1u59_A 167 YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE------VMAFIEQGKR-M------- 232 (287)
T ss_dssp ECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHH------HHHHHHTTCC-C-------
T ss_pred eeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHH------HHHHHhcCCc-C-------
Confidence 2234678999999988889999999999999999999 999997543211 1111111110 0
Q ss_pred hcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhccCCC
Q 006677 571 MRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSE 617 (635)
Q Consensus 571 ~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~~~~~~ 617 (635)
.........+.+++.+||+.+|++||++.|++++|+++......
T Consensus 233 ---~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~ 276 (287)
T 1u59_A 233 ---ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLAS 276 (287)
T ss_dssp ---CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHT
T ss_pred ---CCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCC
Confidence 00112234677788899999999999999999999999866543
No 111
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=1.9e-39 Score=338.98 Aligned_cols=256 Identities=16% Similarity=0.222 Sum_probs=189.5
Q ss_pred hccccccCceEEEEEEec----CCCeEEEEEeecccC------------ChHHHHHHHHHHHhhcCCCceeceeEEEEe-
Q 006677 343 AEVLGKGSYGTAYKAVLE----ESTTVVVKRLKEVVV------------GKRDFEQQMEIVGRVGQHPNVVPLRAYYYS- 405 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~----~~~~vavK~l~~~~~------------~~~~~~~e~~~l~~l~~h~niv~l~~~~~~- 405 (635)
.+.||+|+||+||+|... .+..+|+|++..... ....+.+|+..+..+ +||||+++++++..
T Consensus 42 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l-~h~ni~~~~~~~~~~ 120 (345)
T 2v62_A 42 GKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQL-DYLGIPLFYGSGLTE 120 (345)
T ss_dssp EEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTC-SCCCCCCEEEEEEEE
T ss_pred EeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccc-cccCcceeecccccc
Confidence 468999999999999975 467899999875422 122355666777777 99999999999988
Q ss_pred ---CCeeEEEEEeccCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCC--C
Q 006677 406 ---KDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDL--D 480 (635)
Q Consensus 406 ---~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~--~ 480 (635)
....++||||+ +++|.+++.... .+++..++.++.||+.||+|||+.+ |+||||||+|||++.++ .
T Consensus 121 ~~~~~~~~lv~e~~-~~~L~~~l~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~~ 191 (345)
T 2v62_A 121 FKGRSYRFMVMERL-GIDLQKISGQNG-----TFKKSTVLQLGIRMLDVLEYIHENE---YVHGDIKAANLLLGYKNPDQ 191 (345)
T ss_dssp SSSCEEEEEEEECE-EEEHHHHCBGGG-----BCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEESSSTTS
T ss_pred cCCCcEEEEEEecc-CCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCcCHHHEEEccCCCCc
Confidence 67889999999 999999997532 5999999999999999999999998 99999999999999887 9
Q ss_pred eEEeecCCCCCCCCC-----------CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCCh
Q 006677 481 GCISDFGLTPLMNVP-----------ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDL 549 (635)
Q Consensus 481 ~ki~DfGla~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~ 549 (635)
+||+|||+++..... ....+++.|+|||++.+..++.++|||||||++|||++|+.||........ .
T Consensus 192 ~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~--~ 269 (345)
T 2v62_A 192 VYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPV--A 269 (345)
T ss_dssp EEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHH--H
T ss_pred EEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccH--H
Confidence 999999999765321 233578899999999999999999999999999999999999964321110 0
Q ss_pred hHHHHHHhhhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhccC
Q 006677 550 PRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 615 (635)
Q Consensus 550 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~~~~ 615 (635)
............. ...............+.+++.+||+.||++||+++|+++.|+++....
T Consensus 270 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~ 330 (345)
T 2v62_A 270 VQTAKTNLLDELP-----QSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGIPL 330 (345)
T ss_dssp HHHHHHHHHHTTT-----HHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCCCC
T ss_pred HHHHHHhhccccc-----HHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCCcc
Confidence 1111111111110 000000000012346777888999999999999999999999876533
No 112
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=7.2e-39 Score=330.23 Aligned_cols=248 Identities=21% Similarity=0.315 Sum_probs=192.2
Q ss_pred ccccccCceEEEEEEec-CCCeEEEEEeecccC-ChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEeccCCCh
Q 006677 344 EVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV-GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSL 421 (635)
Q Consensus 344 ~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 421 (635)
++||+|+||+||+|... +++.||||++..... ....+.+|++++.++.+||||+++++++.+.+..++||||+++|+|
T Consensus 19 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 98 (316)
T 2ac3_A 19 DVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSI 98 (316)
T ss_dssp CCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTCBH
T ss_pred ceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEcCCCCcH
Confidence 57999999999999954 688999999976533 3677899999999976899999999999999999999999999999
Q ss_pred hhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCC---eEEeecCCCCCCCCC---
Q 006677 422 STLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLD---GCISDFGLTPLMNVP--- 495 (635)
Q Consensus 422 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~---~ki~DfGla~~~~~~--- 495 (635)
.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+||+++.++. +||+|||++......
T Consensus 99 ~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~ 170 (316)
T 2ac3_A 99 LSHIHKR-----RHFNELEASVVVQDVASALDFLHNKG---IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDC 170 (316)
T ss_dssp HHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEESCSSSSCSEEECCTTCCC--------
T ss_pred HHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---ceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCcc
Confidence 9999753 24899999999999999999999998 999999999999998776 999999998765321
Q ss_pred --------CCCCCCCcccCcccccC-----CCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCCh---------hHHH
Q 006677 496 --------ATPSRSAGYRAPEVIET-----RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDL---------PRWV 553 (635)
Q Consensus 496 --------~~~~~~~~y~aPE~~~~-----~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~---------~~~~ 553 (635)
....+|+.|+|||++.. ..++.++|||||||++|||++|+.||......+.... ....
T Consensus 171 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 250 (316)
T 2ac3_A 171 SPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLF 250 (316)
T ss_dssp -----------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHH
T ss_pred ccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHH
Confidence 12347889999999875 5588999999999999999999999987654331100 0001
Q ss_pred HHHhhhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006677 554 QSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 554 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 607 (635)
..+..... ...... .. .....+.+++.+||+.||++|||++|++++
T Consensus 251 ~~i~~~~~--~~~~~~---~~---~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 296 (316)
T 2ac3_A 251 ESIQEGKY--EFPDKD---WA---HISCAAKDLISKLLVRDAKQRLSAAQVLQH 296 (316)
T ss_dssp HHHHHCCC--CCCHHH---HT---TSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHhccCc--ccCchh---cc---cCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 11111100 000000 00 122456788889999999999999999884
No 113
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=4.3e-39 Score=335.65 Aligned_cols=256 Identities=23% Similarity=0.376 Sum_probs=202.1
Q ss_pred hccccccCceEEEEEEecCCCeEEEEEeecccCChHHHHHHHHHHHhh-cCCCceeceeEEEEeCC----eeEEEEEecc
Q 006677 343 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRV-GQHPNVVPLRAYYYSKD----EKLLVYDYFA 417 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l-~~h~niv~l~~~~~~~~----~~~lv~e~~~ 417 (635)
.+.||+|+||+||+|... ++.||+|++... ....+.+|.+++..+ .+||||+++++++.... ..++||||++
T Consensus 47 ~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~--~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~ 123 (342)
T 1b6c_B 47 QESIGKGRFGEVWRGKWR-GEEVAVKIFSSR--EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHE 123 (342)
T ss_dssp EEEEEEETTEEEEEEEET-TEEEEEEEECGG--GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEEEECCCT
T ss_pred EeeecCCCCcEEEEEEEc-CccEEEEEeCch--hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeEEEEeecC
Confidence 578999999999999985 889999998653 356678888888873 28999999999998876 7899999999
Q ss_pred CCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH--------hcCCCCceecCCCCCCeEEcCCCCeEEeecCCC
Q 006677 418 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIH--------SMGGPKFTHGNIKASNVLINQDLDGCISDFGLT 489 (635)
Q Consensus 418 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH--------~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla 489 (635)
+|+|.+++... .+++..+..++.|++.||+||| +.+ |+||||||+||+++.++.+||+|||++
T Consensus 124 ~g~L~~~l~~~------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~NIll~~~~~~kL~Dfg~~ 194 (342)
T 1b6c_B 124 HGSLFDYLNRY------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA---IAHRDLKSKNILVKKNGTCCIADLGLA 194 (342)
T ss_dssp TCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCE---EECSCCSGGGEEECTTSCEEECCCTTC
T ss_pred CCcHHHHHhcc------CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCC---eeeCCCCHHHEEECCCCCEEEEECCCc
Confidence 99999999642 3899999999999999999999 666 999999999999999999999999998
Q ss_pred CCCCCC--------CCCCCCCcccCcccccCCC------CCCccchhhHHHHHHHHHhC----------CCCCCCCCCCC
Q 006677 490 PLMNVP--------ATPSRSAGYRAPEVIETRK------HSHKSDVYSFGVLLLEMLTG----------KAPLQSPTRDD 545 (635)
Q Consensus 490 ~~~~~~--------~~~~~~~~y~aPE~~~~~~------~~~k~Dvws~Gvvl~el~tg----------~~p~~~~~~~~ 545 (635)
...... ....+++.|+|||++.+.. ++.++|||||||++|||+|| ..||......+
T Consensus 195 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~ 274 (342)
T 1b6c_B 195 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD 274 (342)
T ss_dssp EEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSS
T ss_pred eeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCc
Confidence 655432 2335788999999997753 34689999999999999999 77876543322
Q ss_pred CCChhHHHHHHhhhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhccCC
Q 006677 546 MVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDS 616 (635)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~~~~~ 616 (635)
.....+............. ... ....+....+.+++.+||+.||++|||+.|++++|+++.+...
T Consensus 275 -~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~~~ 339 (342)
T 1b6c_B 275 -PSVEEMRKVVCEQKLRPNI-PNR----WQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEG 339 (342)
T ss_dssp -CCHHHHHHHHTTSCCCCCC-CGG----GGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHTTC
T ss_pred -ccHHHHHHHHHHHHhCCCC-ccc----ccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHHhc
Confidence 1222333322222211111 110 1123556678899999999999999999999999999987653
No 114
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=4.6e-39 Score=327.44 Aligned_cols=248 Identities=27% Similarity=0.427 Sum_probs=188.8
Q ss_pred hccccccCceEEEEEEecCCCeEEEEEeecccCC---hHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEeccCC
Q 006677 343 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASG 419 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g 419 (635)
.+.||+|+||+||+|... ..||+|+++..... .+.+.+|+++++++ +||||+++++++ .....++||||++++
T Consensus 29 ~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~-~~~~~~lv~e~~~~~ 104 (289)
T 3og7_A 29 GQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT-RHVNILLFMGYS-TAPQLAIVTQWCEGS 104 (289)
T ss_dssp EEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEE-CSSSCEEEEECCCEE
T ss_pred eeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhC-CCCcEEEEEeec-cCCccEEEEEecCCC
Confidence 468999999999999865 45999998765433 35688999999999 899999999965 556789999999999
Q ss_pred ChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCC----
Q 006677 420 SLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP---- 495 (635)
Q Consensus 420 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~---- 495 (635)
+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 105 ~L~~~l~~~~----~~~~~~~~~~i~~qi~~~L~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 177 (289)
T 3og7_A 105 SLYHHLHASE----TKFEMKKLIDIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSH 177 (289)
T ss_dssp EHHHHHTTC-------CCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEETTTEEEECCCC------------
T ss_pred cHHHHHhhcc----CCCCHHHHHHHHHHHHHHHHHHHhCC---cccccCccceEEECCCCCEEEccceeccccccccccc
Confidence 9999996432 34899999999999999999999998 999999999999999999999999998765421
Q ss_pred --CCCCCCCcccCccccc---CCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhh
Q 006677 496 --ATPSRSAGYRAPEVIE---TRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVEL 570 (635)
Q Consensus 496 --~~~~~~~~y~aPE~~~---~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 570 (635)
....+++.|+|||++. +..++.++||||||+++|||++|+.||......+ ................
T Consensus 178 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~------~~~~~~~~~~~~~~~~--- 248 (289)
T 3og7_A 178 QFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD------QIIEMVGRGSLSPDLS--- 248 (289)
T ss_dssp ------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHH------HHHHHHHHTSCCCCTT---
T ss_pred cccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHH------HHHHHhcccccCcchh---
Confidence 1234788999999986 5668889999999999999999999997543211 1111121111110000
Q ss_pred hcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhc
Q 006677 571 MRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQ 613 (635)
Q Consensus 571 ~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~~ 613 (635)
. ........+.+++.+||+.+|++|||++|+++.|+++.+
T Consensus 249 -~--~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 249 -K--VRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp -S--SCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred -h--ccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 0 001223467788889999999999999999999999864
No 115
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=5.8e-39 Score=338.00 Aligned_cols=248 Identities=14% Similarity=0.207 Sum_probs=199.0
Q ss_pred hccccccCceEEEEEE------ecCCCeEEEEEeecccCChHHHHHHHHHHHhhc--CCCceeceeEEEEeCCeeEEEEE
Q 006677 343 AEVLGKGSYGTAYKAV------LEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVG--QHPNVVPLRAYYYSKDEKLLVYD 414 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~------~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~--~h~niv~l~~~~~~~~~~~lv~e 414 (635)
.+.||+|+||+||+|. ...++.||+|++... ...++.+|++++.++. .|+||+.+++++...+..++|||
T Consensus 70 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~~~lv~e 147 (365)
T 3e7e_A 70 HHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA--NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVGE 147 (365)
T ss_dssp EEEEEECSSEEEEEEEC-------CCCCEEEEEESSC--CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSCEEEEEC
T ss_pred EEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC--ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCCcEEEEe
Confidence 4679999999999994 456889999998653 4667888888888883 28999999999999999999999
Q ss_pred eccCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcC-----------CCCeEE
Q 006677 415 YFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQ-----------DLDGCI 483 (635)
Q Consensus 415 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~-----------~~~~ki 483 (635)
|+++|+|.++++.........+++..+..++.||+.||+|||+.+ |+||||||+|||++. ++.+||
T Consensus 148 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~---ivHrDiKp~NIll~~~~~~~~~~~~~~~~~kl 224 (365)
T 3e7e_A 148 LYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCE---IIHGDIKPDNFILGNGFLEQDDEDDLSAGLAL 224 (365)
T ss_dssp CCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECGGGTCC------CTTEEE
T ss_pred ccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCC---eecCCCCHHHEEecccccCccccccccCCEEE
Confidence 999999999997543333456999999999999999999999998 999999999999998 899999
Q ss_pred eecCCCCCCC---C---CCCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHh
Q 006677 484 SDFGLTPLMN---V---PATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVV 557 (635)
Q Consensus 484 ~DfGla~~~~---~---~~~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 557 (635)
+|||+++... . .....||+.|+|||++.+..++.++|||||||++|||+||+.||........
T Consensus 225 ~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~----------- 293 (365)
T 3e7e_A 225 IDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGEC----------- 293 (365)
T ss_dssp CCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEE-----------
T ss_pred eeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCce-----------
Confidence 9999996542 1 1234589999999999999999999999999999999999999964322110
Q ss_pred hhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCC-CCHHHHHHHHHHhhccCCC
Q 006677 558 REEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMR-PNMDEVVRMIEEVRQSDSE 617 (635)
Q Consensus 558 ~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~R-Ps~~evl~~L~~~~~~~~~ 617 (635)
. ......... ..+ .+.+++..|++.+|.+| |+++++.+.|+++.+....
T Consensus 294 ----~---~~~~~~~~~-~~~---~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~~~~ 343 (365)
T 3e7e_A 294 ----K---PEGLFRRLP-HLD---MWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQHYT 343 (365)
T ss_dssp ----E---ECSCCTTCS-SHH---HHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHHHTT
T ss_pred ----e---echhccccC-cHH---HHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHHhhh
Confidence 0 001111111 122 34456679999999998 6788999999998876543
No 116
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=4.2e-39 Score=336.55 Aligned_cols=239 Identities=23% Similarity=0.311 Sum_probs=195.4
Q ss_pred hccccccCceEEEEEEecC-CCeEEEEEeeccc----CChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEecc
Q 006677 343 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVV----VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 417 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 417 (635)
.+.||+|+||.||+|.... ++.||+|+++... ...+.+..|..++..+.+||||+++++++.+.+..|+||||++
T Consensus 25 ~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~ 104 (353)
T 2i0e_A 25 LMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVN 104 (353)
T ss_dssp EEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEEEEeCCC
Confidence 4689999999999999865 6789999997642 2345677888888887789999999999999999999999999
Q ss_pred CCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCC---
Q 006677 418 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV--- 494 (635)
Q Consensus 418 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~--- 494 (635)
+|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 105 gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~ 176 (353)
T 2i0e_A 105 GGDLMYHIQQV-----GRFKEPHAVFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV 176 (353)
T ss_dssp SCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTC
T ss_pred CCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---EEeccCCHHHEEEcCCCcEEEEeCCcccccccCCc
Confidence 99999999743 24899999999999999999999998 99999999999999999999999999976432
Q ss_pred -CCCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcc
Q 006677 495 -PATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRF 573 (635)
Q Consensus 495 -~~~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 573 (635)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...+. ......+...... + .
T Consensus 177 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~------~~~~~~i~~~~~~---~------p 241 (353)
T 2i0e_A 177 TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE------DELFQSIMEHNVA---Y------P 241 (353)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHCCCC---C------C
T ss_pred ccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCH------HHHHHHHHhCCCC---C------C
Confidence 2345689999999999999999999999999999999999999975432 2222333322111 0 0
Q ss_pred cChHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHHH
Q 006677 574 QNIEEEMVQMLQIGMACVAKVPDMRPN-----MDEVVRM 607 (635)
Q Consensus 574 ~~~~~~~~~l~~l~~~cl~~~P~~RPs-----~~evl~~ 607 (635)
......+.+++.+|++.||++||+ ++|++++
T Consensus 242 ---~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h 277 (353)
T 2i0e_A 242 ---KSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 277 (353)
T ss_dssp ---TTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTS
T ss_pred ---CCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 112235667788999999999995 5777764
No 117
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=2.2e-39 Score=347.52 Aligned_cols=244 Identities=18% Similarity=0.300 Sum_probs=194.2
Q ss_pred hccccccCceEEEEEEecC-CCeEEEEEeeccc----CChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEecc
Q 006677 343 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVV----VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 417 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 417 (635)
.++||+|+||+||+|+... ++.||+|++++.. .....+.+|..++..+ +||||+++++++.+.+..++||||++
T Consensus 79 ~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~-~hp~Iv~l~~~~~~~~~~~lV~Ey~~ 157 (437)
T 4aw2_A 79 LKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNG-DSKWITTLHYAFQDDNNLYLVMDYYV 157 (437)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHS-CTTTBCCEEEEEECSSEEEEEECCCT
T ss_pred EEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEeeCCEEEEEEecCC
Confidence 4689999999999999865 6789999997532 2234588899999998 99999999999999999999999999
Q ss_pred CCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCCC-
Q 006677 418 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA- 496 (635)
Q Consensus 418 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~~- 496 (635)
+|+|.+++.... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 158 gg~L~~~l~~~~----~~l~e~~~~~~~~qi~~aL~~LH~~g---iiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~~ 230 (437)
T 4aw2_A 158 GGDLLTLLSKFE----DRLPEEMARFYLAEMVIAIDSVHQLH---YVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGT 230 (437)
T ss_dssp TCBHHHHHHTTT----TCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCTTSC
T ss_pred CCcHHHHHHHcc----CCCCHHHHHHHHHHHHHHHHHHHhCC---eEecccCHHHeeEcCCCCEEEcchhhhhhcccCCC
Confidence 999999997532 34999999999999999999999998 9999999999999999999999999997654322
Q ss_pred ----CCCCCCcccCccccc-----CCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccch
Q 006677 497 ----TPSRSAGYRAPEVIE-----TRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFD 567 (635)
Q Consensus 497 ----~~~~~~~y~aPE~~~-----~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 567 (635)
...||+.|+|||++. ...++.++|||||||++|||++|+.||...+.. .....+........ +.
T Consensus 231 ~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~------~~~~~i~~~~~~~~-~p 303 (437)
T 4aw2_A 231 VQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLV------ETYGKIMNHKERFQ-FP 303 (437)
T ss_dssp EECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHH------HHHHHHHTHHHHCC-CC
T ss_pred cccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChh------HHHHhhhhcccccc-CC
Confidence 246899999999997 567899999999999999999999999854322 22222221110000 00
Q ss_pred hhhhcccChHHHHHHHHHHHHHcccCCCCC--CCCHHHHHHH
Q 006677 568 VELMRFQNIEEEMVQMLQIGMACVAKVPDM--RPNMDEVVRM 607 (635)
Q Consensus 568 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~--RPs~~evl~~ 607 (635)
. ..... ...+.+++.+|++.+|++ ||+++|++++
T Consensus 304 ~---~~~~~---s~~~~dLi~~lL~~~~~r~~r~~~~eil~H 339 (437)
T 4aw2_A 304 T---QVTDV---SENAKDLIRRLICSREHRLGQNGIEDFKKH 339 (437)
T ss_dssp S---SCCCS---CHHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred c---ccccC---CHHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence 0 00112 234566777999888888 9999999884
No 118
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=4.6e-39 Score=330.55 Aligned_cols=252 Identities=22% Similarity=0.301 Sum_probs=193.0
Q ss_pred hccccccCceEEEEEEe-cCCCeEEEEEeecccC------ChHHHHHHHHHHHhhc--CCCceeceeEEEEeCC-----e
Q 006677 343 AEVLGKGSYGTAYKAVL-EESTTVVVKRLKEVVV------GKRDFEQQMEIVGRVG--QHPNVVPLRAYYYSKD-----E 408 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~------~~~~~~~e~~~l~~l~--~h~niv~l~~~~~~~~-----~ 408 (635)
.+.||+|+||+||+|.. .+++.||+|++..... ....+.+|+++++++. +||||+++++++.... .
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~~~~~~ 93 (308)
T 3g33_A 14 VAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIK 93 (308)
T ss_dssp EEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCSSSEEE
T ss_pred EEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCCCCcee
Confidence 46799999999999996 4578999999874432 2356778888888774 4999999999998765 4
Q ss_pred eEEEEEeccCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCC
Q 006677 409 KLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGL 488 (635)
Q Consensus 409 ~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGl 488 (635)
.++||||+. |+|.+++.... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+
T Consensus 94 ~~lv~e~~~-~~L~~~~~~~~---~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~Nil~~~~~~~kl~Dfg~ 166 (308)
T 3g33_A 94 VTLVFEHVD-QDLRTYLDKAP---PPGLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGL 166 (308)
T ss_dssp EEEEEECCC-CBHHHHHHTCC---TTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCTTTEEECTTSCEEECSCSC
T ss_pred EEEEehhhh-cCHHHHHhhcc---CCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCEEEeeCcc
Confidence 789999997 59999997543 234899999999999999999999998 99999999999999999999999999
Q ss_pred CCCCCCCCC---CCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhh-------
Q 006677 489 TPLMNVPAT---PSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVR------- 558 (635)
Q Consensus 489 a~~~~~~~~---~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~------- 558 (635)
++....... ..+|+.|+|||++.+..++.++|||||||++|||++|+.||......+ ....+..
T Consensus 167 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~------~~~~i~~~~~~~~~ 240 (308)
T 3g33_A 167 ARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD------QLGKIFDLIGLPPE 240 (308)
T ss_dssp TTTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHH------HHHHHHHHHCCCCT
T ss_pred ccccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHHHHhCCCCh
Confidence 987654332 347889999999999999999999999999999999999997643221 1111111
Q ss_pred hccccccch--hhhh-c-ccC----hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006677 559 EEWTAEVFD--VELM-R-FQN----IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 559 ~~~~~~~~d--~~~~-~-~~~----~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 607 (635)
..|...... .... . ... ..+....+.+++.+|++.||++|||+.|++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 297 (308)
T 3g33_A 241 DDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 297 (308)
T ss_dssp TTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence 111110000 0000 0 000 01122456778889999999999999999874
No 119
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=8.3e-39 Score=340.50 Aligned_cols=265 Identities=16% Similarity=0.248 Sum_probs=207.7
Q ss_pred hccccccCceEEEEEEecC-CCeEEEEEeeccc--CChHHHHHHHHHHHhhcCCCceeceeEEEEeCC--eeEEEEEecc
Q 006677 343 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVV--VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKD--EKLLVYDYFA 417 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~--~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~--~~~lv~e~~~ 417 (635)
.++||+|+||+||+|.... ++.||||++.... ...+.+.+|++++.++ +||||+++++++...+ ..++||||++
T Consensus 14 ~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~~~lv~e~~~ 92 (396)
T 4eut_A 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKL-NHKNIVKLFAIEEETTTRHKVLIMEFCP 92 (396)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHC-CCTTBCCEEEEEECTTTCCEEEEECCCT
T ss_pred EEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhc-CCCCCCeEEEeeccCCCCeeEEEEecCC
Confidence 4689999999999999764 8899999997643 3456788999999999 8999999999998765 6799999999
Q ss_pred CCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEE----cCCCCeEEeecCCCCCCC
Q 006677 418 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLI----NQDLDGCISDFGLTPLMN 493 (635)
Q Consensus 418 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll----~~~~~~ki~DfGla~~~~ 493 (635)
+|+|.+++..... ...+++..+..++.||+.||+|||+.+ |+||||||+|||+ +.++.+||+|||+++...
T Consensus 93 ~g~L~~~l~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~ 167 (396)
T 4eut_A 93 CGSLYTVLEEPSN--AYGLPESEFLIVLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE 167 (396)
T ss_dssp TEEHHHHTTSGGG--TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEECTTSCEEEEECCGGGCEECC
T ss_pred CCCHHHHHHhhhc--ccCCCHHHHHHHHHHHHHHHHHHHHCC---EEECCcCHHHEEEeecCCCceeEEEecCCCceEcc
Confidence 9999999975432 233899999999999999999999998 9999999999999 778889999999997765
Q ss_pred CCC---CCCCCCcccCcccccC--------CCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccc
Q 006677 494 VPA---TPSRSAGYRAPEVIET--------RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWT 562 (635)
Q Consensus 494 ~~~---~~~~~~~y~aPE~~~~--------~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (635)
... ...+++.|+|||++.+ ..++.++|||||||++|||++|+.||........ .......+......
T Consensus 168 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~--~~~~~~~~~~~~p~ 245 (396)
T 4eut_A 168 DDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRR--NKEVMYKIITGKPS 245 (396)
T ss_dssp CGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTT--CHHHHHHHHHSCCT
T ss_pred CCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccc--hHHHHHHHhcCCCc
Confidence 432 3457899999999865 5678899999999999999999999975432221 12223333322211
Q ss_pred ccc------------chhhhh-cccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhccC
Q 006677 563 AEV------------FDVELM-RFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 615 (635)
Q Consensus 563 ~~~------------~d~~~~-~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~~~~ 615 (635)
... +..... ...........+.+++.+||+.||++||+++|+++.++++.+..
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~~ 311 (396)
T 4eut_A 246 GAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHRM 311 (396)
T ss_dssp TCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTCE
T ss_pred ccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhce
Confidence 100 000000 11122456667788999999999999999999999999988653
No 120
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=7.4e-39 Score=331.91 Aligned_cols=238 Identities=22% Similarity=0.340 Sum_probs=187.6
Q ss_pred hccccccCceEEEEEEe----cCCCeEEEEEeecccC-----ChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEE
Q 006677 343 AEVLGKGSYGTAYKAVL----EESTTVVVKRLKEVVV-----GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVY 413 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~----~~~~~vavK~l~~~~~-----~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~ 413 (635)
.+.||+|+||.||+++. .+++.||+|+++.... ....+.+|++++.++ +||||+++++++...+..++||
T Consensus 22 ~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~ 100 (327)
T 3a62_A 22 LRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV-KHPFIVDLIYAFQTGGKLYLIL 100 (327)
T ss_dssp EEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHC-CCTTBCCEEEEEECSSCEEEEE
T ss_pred EEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhC-CCCCccceeEEEEcCCEEEEEE
Confidence 46899999999999997 4688999999976432 234577899999999 8999999999999999999999
Q ss_pred EeccCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCC
Q 006677 414 DYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN 493 (635)
Q Consensus 414 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~ 493 (635)
||+++|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 101 e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~ 172 (327)
T 3a62_A 101 EYLSGGELFMQLERE-----GIFMEDTACFYLAEISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESI 172 (327)
T ss_dssp ECCTTEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCTTTEEECTTSCEEECCCSCC----
T ss_pred eCCCCCcHHHHHHhC-----CCCCHHHHHHHHHHHHHHHHHHHhCC---EEcccCCHHHeEECCCCcEEEEeCCcccccc
Confidence 999999999999743 24889999999999999999999998 9999999999999999999999999987643
Q ss_pred CC----CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhh
Q 006677 494 VP----ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVE 569 (635)
Q Consensus 494 ~~----~~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 569 (635)
.. ....+|+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+......
T Consensus 173 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~------~~~~~~i~~~~~~------- 239 (327)
T 3a62_A 173 HDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENR------KKTIDKILKCKLN------- 239 (327)
T ss_dssp ------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH------HHHHHHHHHTCCC-------
T ss_pred cCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCH------HHHHHHHHhCCCC-------
Confidence 22 234578999999999999999999999999999999999999975432 1222222221110
Q ss_pred hhcccChHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 006677 570 LMRFQNIEEEMVQMLQIGMACVAKVPDMRP-----NMDEVVRM 607 (635)
Q Consensus 570 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~RP-----s~~evl~~ 607 (635)
... .....+.+++.+||+.||++|| ++.|++++
T Consensus 240 --~p~---~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~h 277 (327)
T 3a62_A 240 --LPP---YLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAH 277 (327)
T ss_dssp --CCT---TSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHS
T ss_pred --CCC---CCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcC
Confidence 001 1223566778899999999999 77888773
No 121
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=6.6e-39 Score=339.15 Aligned_cols=243 Identities=21% Similarity=0.383 Sum_probs=196.8
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccC-ChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEeccCCC
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV-GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGS 420 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 420 (635)
.+.||+|+||.||+|... +++.||+|++..... ....+.+|++++.++ +||||+++++++.+.+..++||||+++|+
T Consensus 56 ~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~~lv~E~~~gg~ 134 (387)
T 1kob_A 56 LEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQL-HHPKLINLHDAFEDKYEMVLILEFLSGGE 134 (387)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTC-CSTTBCCEEEEEECSSEEEEEEECCCCCB
T ss_pred EEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhC-CCcCCCeEEEEEEeCCEEEEEEEcCCCCc
Confidence 468999999999999975 578899999875432 345788999999999 99999999999999999999999999999
Q ss_pred hhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcC--CCCeEEeecCCCCCCCCCC--
Q 006677 421 LSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQ--DLDGCISDFGLTPLMNVPA-- 496 (635)
Q Consensus 421 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~--~~~~ki~DfGla~~~~~~~-- 496 (635)
|.+++.... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++. ++.+||+|||+++......
T Consensus 135 L~~~l~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~ 207 (387)
T 1kob_A 135 LFDRIAAED----YKMSEAEVINYMRQACEGLKHMHEHS---IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIV 207 (387)
T ss_dssp HHHHTTCTT----CCBCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCE
T ss_pred HHHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccchHHeEEecCCCCceEEEecccceecCCCcce
Confidence 999997432 34899999999999999999999998 999999999999974 4789999999998765432
Q ss_pred -CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcccC
Q 006677 497 -TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQN 575 (635)
Q Consensus 497 -~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 575 (635)
...+|+.|+|||++.+..++.++|||||||++|||++|..||..... ......+....+.. +.. ..
T Consensus 208 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~------~~~~~~i~~~~~~~---~~~--~~-- 274 (387)
T 1kob_A 208 KVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDD------LETLQNVKRCDWEF---DED--AF-- 274 (387)
T ss_dssp EEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH------HHHHHHHHHCCCCC---CSS--TT--
T ss_pred eeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCH------HHHHHHHHhCCCCC---Ccc--cc--
Confidence 23578999999999999999999999999999999999999975431 12222222222111 000 01
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006677 576 IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 576 ~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 607 (635)
......+.+++.+||+.||++|||+.|++++
T Consensus 275 -~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 275 -SSVSPEAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp -TTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred -ccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 1122356678889999999999999999874
No 122
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=5.2e-39 Score=335.78 Aligned_cols=238 Identities=18% Similarity=0.215 Sum_probs=197.2
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeeccc----CChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEecc
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVV----VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 417 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 417 (635)
.+.||+|+||.||+|... +++.||+|++.... ...+.+.+|++++.++ +||||+++++++.+.+..++||||++
T Consensus 46 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~ 124 (350)
T 1rdq_E 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVA 124 (350)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred EEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEcCCEEEEEEcCCC
Confidence 468999999999999975 58899999997542 2346788899999999 99999999999999999999999999
Q ss_pred CCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCC-C
Q 006677 418 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP-A 496 (635)
Q Consensus 418 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~-~ 496 (635)
+|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++..... .
T Consensus 125 gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~~~ 196 (350)
T 1rdq_E 125 GGEMFSHLRRI-----GRFSEPHARFYAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196 (350)
T ss_dssp TCBHHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECSSCBC
T ss_pred CCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCccceEEECCCCCEEEcccccceeccCCcc
Confidence 99999999743 24899999999999999999999998 999999999999999999999999999866443 2
Q ss_pred CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcccCh
Q 006677 497 TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNI 576 (635)
Q Consensus 497 ~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 576 (635)
...||+.|+|||++.+..++.++|||||||++|||++|+.||...+. ......+...... + .
T Consensus 197 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~------~~~~~~i~~~~~~---~------p--- 258 (350)
T 1rdq_E 197 TLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP------IQIYEKIVSGKVR---F------P--- 258 (350)
T ss_dssp CCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHCCCC---C------C---
T ss_pred cccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCH------HHHHHHHHcCCCC---C------C---
Confidence 44689999999999999999999999999999999999999975431 2222222222110 0 0
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCC-----HHHHHHH
Q 006677 577 EEEMVQMLQIGMACVAKVPDMRPN-----MDEVVRM 607 (635)
Q Consensus 577 ~~~~~~l~~l~~~cl~~~P~~RPs-----~~evl~~ 607 (635)
......+.+++.+||+.||++||+ ++|++++
T Consensus 259 ~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h 294 (350)
T 1rdq_E 259 SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294 (350)
T ss_dssp TTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred CCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhC
Confidence 112235677888999999999998 8888773
No 123
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=1.2e-38 Score=330.38 Aligned_cols=255 Identities=23% Similarity=0.406 Sum_probs=201.6
Q ss_pred hccccccCceEEEEEEecC-CCe--EEEEEeeccc--CChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEecc
Q 006677 343 AEVLGKGSYGTAYKAVLEE-STT--VVVKRLKEVV--VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 417 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~~-~~~--vavK~l~~~~--~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 417 (635)
.+.||+|+||.||+|.... +.. +++|+++... ...+.+.+|++++.++.+||||+++++++...+..++||||++
T Consensus 30 ~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~ 109 (327)
T 1fvr_A 30 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAP 109 (327)
T ss_dssp EEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEECCCT
T ss_pred eeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEEEecCC
Confidence 5789999999999999654 443 4899887542 2346788999999999889999999999999999999999999
Q ss_pred CCChhhhccCCC-----------CCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeec
Q 006677 418 SGSLSTLLHGNR-----------GAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDF 486 (635)
Q Consensus 418 ~g~L~~~l~~~~-----------~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Df 486 (635)
+|+|.+++.... ......+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+||
T Consensus 110 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~~~~~kL~Df 186 (327)
T 1fvr_A 110 HGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVAKIADF 186 (327)
T ss_dssp TCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECGGGCEEECCT
T ss_pred CCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCccceEEEcCCCeEEEccc
Confidence 999999997543 012345899999999999999999999998 999999999999999999999999
Q ss_pred CCCCCCCCC---CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccc
Q 006677 487 GLTPLMNVP---ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWT 562 (635)
Q Consensus 487 Gla~~~~~~---~~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (635)
|+++..... ....+++.|+|||++.+..++.++||||||+++|||+| |+.||..... ......+. ....
T Consensus 187 g~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~------~~~~~~~~-~~~~ 259 (327)
T 1fvr_A 187 GLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC------AELYEKLP-QGYR 259 (327)
T ss_dssp TCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCH------HHHHHHGG-GTCC
T ss_pred CcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcH------HHHHHHhh-cCCC
Confidence 998754322 22335778999999998889999999999999999998 9999975432 11122211 1111
Q ss_pred cccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhccCCC
Q 006677 563 AEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSE 617 (635)
Q Consensus 563 ~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~~~~~~ 617 (635)
.. .. ......+.+++.+||+.+|++|||++|++++|+.+.+....
T Consensus 260 ~~-------~~---~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~ 304 (327)
T 1fvr_A 260 LE-------KP---LNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKT 304 (327)
T ss_dssp CC-------CC---TTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSSC
T ss_pred CC-------CC---CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhhcC
Confidence 00 01 11224567788899999999999999999999999977654
No 124
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=1.2e-38 Score=324.86 Aligned_cols=251 Identities=22% Similarity=0.338 Sum_probs=190.7
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccCC---hHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEeccC
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS 418 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~ 418 (635)
.+.||+|+||+||+|... +++.||+|++...... ...+.+|++++.++ +||||+++++++.+++..++||||+++
T Consensus 7 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~ 85 (292)
T 3o0g_A 7 LEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKEL-KHKNIVRLHDVLHSDKKLTLVFEFCDQ 85 (292)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTC-CCTTBCCEEEEEEETTEEEEEEECCSE
T ss_pred eeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcC-CCCCEeeEEeEEEeCCEEEEEEecCCC
Confidence 467999999999999975 4788999999765432 35688899999999 899999999999999999999999986
Q ss_pred CChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCC---
Q 006677 419 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP--- 495 (635)
Q Consensus 419 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~--- 495 (635)
++.+.+.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 86 -~l~~~~~~~~----~~l~~~~~~~~~~ql~~~l~~lH~~~---ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 157 (292)
T 3o0g_A 86 -DLKKYFDSCN----GDLDPEIVKSFLFQLLKGLGFCHSRN---VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRC 157 (292)
T ss_dssp -EHHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCSCCSC
T ss_pred -CHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeecccceecCCcccc
Confidence 5655554322 34999999999999999999999998 999999999999999999999999999765432
Q ss_pred -CCCCCCCcccCcccccCCC-CCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhh---h----ccccccc
Q 006677 496 -ATPSRSAGYRAPEVIETRK-HSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVR---E----EWTAEVF 566 (635)
Q Consensus 496 -~~~~~~~~y~aPE~~~~~~-~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~---~----~~~~~~~ 566 (635)
....+|+.|+|||++.+.. ++.++|||||||++|||++|..||.... +.......+.. . .|.....
T Consensus 158 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~-----~~~~~~~~i~~~~~~~~~~~~~~~~~ 232 (292)
T 3o0g_A 158 YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGN-----DVDDQLKRIFRLLGTPTEEQWPSMTK 232 (292)
T ss_dssp CCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCS-----SHHHHHHHHHHHHCCCCTTTCTTGGG
T ss_pred ccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCC-----CHHHHHHHHHHHhCCCChhhhhhhcc
Confidence 2345788899999997766 7999999999999999999998864322 11111222111 0 0000000
Q ss_pred --h--------hhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006677 567 --D--------VELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 567 --d--------~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 607 (635)
+ ...............+.+++.+|++.||++|||++|++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 283 (292)
T 3o0g_A 233 LPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283 (292)
T ss_dssp STTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred cccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 0 0000000011223456678889999999999999999873
No 125
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.7e-39 Score=335.20 Aligned_cols=246 Identities=22% Similarity=0.378 Sum_probs=192.5
Q ss_pred hccccccCceEEEEEEec-CCCe----EEEEEeeccc--CChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEe
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTT----VVVKRLKEVV--VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDY 415 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~----vavK~l~~~~--~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~ 415 (635)
.++||+|+||+||+|... +++. |++|.+.... ...+.+.+|+.++.++ +||||+++++++.... .++|+||
T Consensus 20 ~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~-~~~v~~~ 97 (327)
T 3lzb_A 20 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-DNPHVCRLLGICLTST-VQLITQL 97 (327)
T ss_dssp EEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTC-CBTTBCCCCEEEESSS-EEEEECC
T ss_pred EEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhC-CCCCeeEEEEEEecCC-ceEEEEe
Confidence 468999999999999964 3444 4677665432 2467899999999999 8999999999998754 7899999
Q ss_pred ccCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCC
Q 006677 416 FASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP 495 (635)
Q Consensus 416 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~ 495 (635)
+.+|+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 98 ~~~g~L~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~ 170 (327)
T 3lzb_A 98 MPFGCLLDYVREHK----DNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 170 (327)
T ss_dssp CSSCBHHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEETTEEEECCTTC-------
T ss_pred cCCCcHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHhhCC---CcCCCCCHHHEEEcCCCCEEEccCcceeEccCc
Confidence 99999999997543 34899999999999999999999998 999999999999999999999999999876432
Q ss_pred C------CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccchh
Q 006677 496 A------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDV 568 (635)
Q Consensus 496 ~------~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 568 (635)
. ...+++.|+|||++.+..++.++|||||||++|||++ |..||......+. . ..+.....
T Consensus 171 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~---~----~~~~~~~~------ 237 (327)
T 3lzb_A 171 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI---S----SILEKGER------ 237 (327)
T ss_dssp ---------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH---H----HHHHTTCC------
T ss_pred cccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH---H----HHHHcCCC------
Confidence 2 1234667999999999999999999999999999999 9999986543321 1 11111110
Q ss_pred hhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhcc
Q 006677 569 ELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQS 614 (635)
Q Consensus 569 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~~~ 614 (635)
..........+.+++.+||+.||++||++.|+++.|+.+...
T Consensus 238 ----~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 279 (327)
T 3lzb_A 238 ----LPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp ----CCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred ----CCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence 001112233567788899999999999999999999998743
No 126
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=4.2e-39 Score=329.13 Aligned_cols=250 Identities=25% Similarity=0.395 Sum_probs=195.6
Q ss_pred hccccccCceEEEEEEecCC----CeEEEEEeecccC--ChHHHHHHHHHHHhhcCCCceeceeEEEEe-CCeeEEEEEe
Q 006677 343 AEVLGKGSYGTAYKAVLEES----TTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYS-KDEKLLVYDY 415 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~~~----~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~-~~~~~lv~e~ 415 (635)
.+.||+|+||+||+|...++ ..+|+|.+..... ..+.+.+|+++++++ +||||+++++++.. ++..++||||
T Consensus 30 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~v~e~ 108 (298)
T 3f66_A 30 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF-SHPNVLSLLGICLRSEGSPLVVLPY 108 (298)
T ss_dssp EEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTC-CCTTBCCCCEEECCSSSCCEEEEEC
T ss_pred cceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhC-CCCCEeeeeeEEEcCCCceEEEEeC
Confidence 47899999999999986432 2578888875432 235688999999999 89999999999654 5578999999
Q ss_pred ccCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCC
Q 006677 416 FASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP 495 (635)
Q Consensus 416 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~ 495 (635)
+++|+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 109 ~~~~~L~~~l~~~~----~~~~~~~~~~i~~ql~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 181 (298)
T 3f66_A 109 MKHGDLRNFIRNET----HNPTVKDLIGFGLQVAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 181 (298)
T ss_dssp CTTCBHHHHHHCTT----CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTCCEEECSCGGGCCCSCG
T ss_pred CCCCCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCchheEEECCCCCEEECccccccccccc
Confidence 99999999997532 34899999999999999999999998 999999999999999999999999999765432
Q ss_pred --------CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccc
Q 006677 496 --------ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVF 566 (635)
Q Consensus 496 --------~~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 566 (635)
....+++.|+|||.+.+..++.++||||||+++|||++ |..||......+ .. .........
T Consensus 182 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~---~~---~~~~~~~~~---- 251 (298)
T 3f66_A 182 EYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD---IT---VYLLQGRRL---- 251 (298)
T ss_dssp GGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTT---HH---HHHHTTCCC----
T ss_pred chhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHH---HH---HHHhcCCCC----
Confidence 12335677999999999999999999999999999999 555665443222 11 111111100
Q ss_pred hhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhccCCC
Q 006677 567 DVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSE 617 (635)
Q Consensus 567 d~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~~~~~~ 617 (635)
.........+.+++.+||+.+|++|||+.|+++.|+++......
T Consensus 252 -------~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~~ 295 (298)
T 3f66_A 252 -------LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 295 (298)
T ss_dssp -------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSCC
T ss_pred -------CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhcc
Confidence 00011223577788899999999999999999999999876544
No 127
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=2.1e-38 Score=336.37 Aligned_cols=240 Identities=20% Similarity=0.315 Sum_probs=190.7
Q ss_pred hccccccCceEEEEEEecCCCeEEEEEeecccCC---hHHHHHHHHHHHhhcC-CCceeceeEEEEeCCeeEEEEEeccC
Q 006677 343 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQ-HPNVVPLRAYYYSKDEKLLVYDYFAS 418 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~-h~niv~l~~~~~~~~~~~lv~e~~~~ 418 (635)
.+.||+|+||.||+|...+++.||||++...... .+.+.+|++++.++.+ ||||+++++++..++..++||| +.+
T Consensus 61 ~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E-~~~ 139 (390)
T 2zmd_A 61 LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGN 139 (390)
T ss_dssp EEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE-CCS
T ss_pred EEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEEe-cCC
Confidence 4689999999999999888999999999765433 3568899999999953 6999999999999999999999 668
Q ss_pred CChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCC---
Q 006677 419 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP--- 495 (635)
Q Consensus 419 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~--- 495 (635)
++|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++ ++.+||+|||+++.....
T Consensus 140 ~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~lH~~~---ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~~ 210 (390)
T 2zmd_A 140 IDLNSWLKKK-----KSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS 210 (390)
T ss_dssp EEHHHHHHHC-----SSCCHHHHHHHHHHHHHHHHHHHTTT---CCCCCCCGGGEEES-SSCEEECCCSSSCCC------
T ss_pred CCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHEEEE-CCeEEEEecCccccccCCCcc
Confidence 8999999753 24889999999999999999999998 99999999999995 589999999999876432
Q ss_pred ---CCCCCCCcccCcccccC-----------CCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcc
Q 006677 496 ---ATPSRSAGYRAPEVIET-----------RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEW 561 (635)
Q Consensus 496 ---~~~~~~~~y~aPE~~~~-----------~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 561 (635)
....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||.... +.......+.....
T Consensus 211 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~-----~~~~~~~~~~~~~~ 285 (390)
T 2zmd_A 211 VVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII-----NQISKLHAIIDPNH 285 (390)
T ss_dssp ---CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCC-----CHHHHHHHHHCTTS
T ss_pred ccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhh-----HHHHHHHHHhCccc
Confidence 23458999999999865 368899999999999999999999997432 11222222222211
Q ss_pred ccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006677 562 TAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 562 ~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 607 (635)
.... ... ....+.+++.+||+.||++|||+.|++++
T Consensus 286 ~~~~-------~~~---~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 286 EIEF-------PDI---PEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp CCCC-------CCC---SCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cCCC-------Ccc---chHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 1100 001 12356778889999999999999999875
No 128
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=9.4e-39 Score=350.85 Aligned_cols=244 Identities=23% Similarity=0.292 Sum_probs=198.4
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeeccc----CChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEecc
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVV----VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 417 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 417 (635)
.++||+|+||.||+|... +++.||+|++.... .....+.+|++++.++ +||||+++++++.+.+..++||||++
T Consensus 189 ~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l-~hp~Iv~l~~~~~~~~~l~lVmEy~~ 267 (576)
T 2acx_A 189 YRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKV-NSRFVVSLAYAYETKDALCLVLTLMN 267 (576)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHc-CCCCEeeEEEEEeeCCEEEEEEEcCC
Confidence 468999999999999975 58899999997542 2356688999999999 99999999999999999999999999
Q ss_pred CCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCCC-
Q 006677 418 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA- 496 (635)
Q Consensus 418 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~~- 496 (635)
+|+|.+++.... ...+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 268 gg~L~~~l~~~~---~~~l~e~~~~~i~~qIl~aL~yLH~~g---IvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~~ 341 (576)
T 2acx_A 268 GGDLKFHIYHMG---QAGFPEARAVFYAAEICCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT 341 (576)
T ss_dssp SCBHHHHHHSSS---SCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCTTCEECCTTCC
T ss_pred CCcHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHHCC---EeccCCchheEEEeCCCCeEEEecccceecccCcc
Confidence 999999997543 234899999999999999999999998 9999999999999999999999999998765432
Q ss_pred --CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhccc
Q 006677 497 --TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQ 574 (635)
Q Consensus 497 --~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 574 (635)
...||+.|+|||++.+..++.++|||||||++|||++|+.||....... ........+.... . . + .
T Consensus 342 ~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~--~~~~i~~~i~~~~-~-~-~------p- 409 (576)
T 2acx_A 342 IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI--KREEVERLVKEVP-E-E-Y------S- 409 (576)
T ss_dssp EECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCC--CHHHHHHHHHHCC-C-C-C------C-
T ss_pred ccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccch--hHHHHHHHhhccc-c-c-C------C-
Confidence 3468999999999999899999999999999999999999998654322 1111111111110 0 0 0 0
Q ss_pred ChHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 006677 575 NIEEEMVQMLQIGMACVAKVPDMRP-----NMDEVVRM 607 (635)
Q Consensus 575 ~~~~~~~~l~~l~~~cl~~~P~~RP-----s~~evl~~ 607 (635)
......+.+++.+|++.||++|| +++|++++
T Consensus 410 --~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H 445 (576)
T 2acx_A 410 --ERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEH 445 (576)
T ss_dssp --TTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred --ccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence 11223566777899999999999 78898874
No 129
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=4.2e-39 Score=331.83 Aligned_cols=255 Identities=27% Similarity=0.381 Sum_probs=202.6
Q ss_pred hccccccCceEEEEEEe------cCCCeEEEEEeecccC--ChHHHHHHHHHHHhhcCCCceeceeEEEEeCC-eeEEEE
Q 006677 343 AEVLGKGSYGTAYKAVL------EESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKD-EKLLVY 413 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~------~~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~-~~~lv~ 413 (635)
.+.||+|+||+||+|.. .+++.||+|+++.... ..+.+.+|++++.++.+||||+++++++...+ ..++||
T Consensus 32 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~~lv~ 111 (316)
T 2xir_A 32 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIV 111 (316)
T ss_dssp EEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEEE
T ss_pred eeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCCceEEEE
Confidence 57899999999999984 2457899999976533 23568899999999988999999999988765 489999
Q ss_pred EeccCCChhhhccCCCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeE
Q 006677 414 DYFASGSLSTLLHGNRGA-----------GRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGC 482 (635)
Q Consensus 414 e~~~~g~L~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~k 482 (635)
||+++|+|.+++...... ....+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+|
T Consensus 112 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dikp~Nil~~~~~~~k 188 (316)
T 2xir_A 112 EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVK 188 (316)
T ss_dssp ECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEE
T ss_pred EcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCC---cccccCccceEEECCCCCEE
Confidence 999999999999764421 0223889999999999999999999998 99999999999999999999
Q ss_pred EeecCCCCCCCCCCC------CCCCCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHH
Q 006677 483 ISDFGLTPLMNVPAT------PSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQS 555 (635)
Q Consensus 483 i~DfGla~~~~~~~~------~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~ 555 (635)
|+|||+++....... ..+++.|+|||++.+..++.++||||||+++|||+| |..||......+ ....
T Consensus 189 l~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~------~~~~ 262 (316)
T 2xir_A 189 ICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE------EFCR 262 (316)
T ss_dssp ECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSH------HHHH
T ss_pred ECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhH------HHHH
Confidence 999999986643322 234678999999999999999999999999999998 999997643221 1111
Q ss_pred HhhhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhccCC
Q 006677 556 VVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDS 616 (635)
Q Consensus 556 ~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~~~~~ 616 (635)
.......... .......+.+++.+||+.||++|||+.|++++|+++.+...
T Consensus 263 ~~~~~~~~~~----------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 313 (316)
T 2xir_A 263 RLKEGTRMRA----------PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 313 (316)
T ss_dssp HHHHTCCCCC----------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred HhccCccCCC----------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhc
Confidence 1111111000 01122356778889999999999999999999999987654
No 130
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=2.2e-39 Score=337.57 Aligned_cols=243 Identities=24% Similarity=0.373 Sum_probs=193.1
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccCChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEeccCCCh
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSL 421 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 421 (635)
.+.||+|+||.||+|... +++.||+|++.... ....+|++++.++.+||||+++++++.+.+..++||||+++|+|
T Consensus 27 ~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~---~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~gg~L 103 (342)
T 2qr7_A 27 KEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSK---RDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGEL 103 (342)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEETTT---CCCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEccc---CChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeCCCCCcH
Confidence 578999999999999976 47889999997653 23457888898887899999999999999999999999999999
Q ss_pred hhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCC----CCeEEeecCCCCCCCCC--
Q 006677 422 STLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQD----LDGCISDFGLTPLMNVP-- 495 (635)
Q Consensus 422 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~----~~~ki~DfGla~~~~~~-- 495 (635)
.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||+.++ +.+||+|||+++.....
T Consensus 104 ~~~i~~~-----~~~~~~~~~~~~~qi~~al~~lH~~g---ivHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~~ 175 (342)
T 2qr7_A 104 LDKILRQ-----KFFSEREASAVLFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENG 175 (342)
T ss_dssp HHHHHTC-----TTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTTC
T ss_pred HHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---cEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCCC
Confidence 9999743 34899999999999999999999998 9999999999998543 35999999999765432
Q ss_pred --CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcc
Q 006677 496 --ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRF 573 (635)
Q Consensus 496 --~~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 573 (635)
....+|+.|+|||++.+..++.++|||||||++|||++|..||...... ........+........ . ...
T Consensus 176 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~---~~~~~~~~i~~~~~~~~--~---~~~ 247 (342)
T 2qr7_A 176 LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDD---TPEEILARIGSGKFSLS--G---GYW 247 (342)
T ss_dssp CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTS---CHHHHHHHHHHCCCCCC--S---TTT
T ss_pred ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcC---CHHHHHHHHccCCcccC--c---ccc
Confidence 2446789999999998888999999999999999999999999753221 22222232222221100 0 001
Q ss_pred cChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006677 574 QNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 574 ~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 607 (635)
. .....+.+++.+||+.||++||++.|++++
T Consensus 248 ~---~~s~~~~~li~~~L~~dP~~R~t~~~il~h 278 (342)
T 2qr7_A 248 N---SVSDTAKDLVSKMLHVDPHQRLTAALVLRH 278 (342)
T ss_dssp T---TSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred c---cCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 1 122356677789999999999999999984
No 131
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.2e-38 Score=330.73 Aligned_cols=241 Identities=21% Similarity=0.323 Sum_probs=189.3
Q ss_pred hccccccCceEEEEEEecCCCeEEEEEeecccCC---hHHHHHHHHHHHhhcCC-CceeceeEEEEeCCeeEEEEEeccC
Q 006677 343 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQH-PNVVPLRAYYYSKDEKLLVYDYFAS 418 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h-~niv~l~~~~~~~~~~~lv~e~~~~ 418 (635)
.+.||+|+||.||++...+++.||||++...... .+.+.+|++++.++.+| +||+++++++..++..++||| +.+
T Consensus 14 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e-~~~ 92 (343)
T 3dbq_A 14 LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGN 92 (343)
T ss_dssp EEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC-CCS
T ss_pred EEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEEe-CCC
Confidence 4689999999999999988999999999765443 35688999999999433 999999999999999999999 567
Q ss_pred CChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCCC--
Q 006677 419 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA-- 496 (635)
Q Consensus 419 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~~-- 496 (635)
|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++ ++.+||+|||+++......
T Consensus 93 ~~L~~~l~~~-----~~~~~~~~~~i~~qi~~al~~lH~~~---iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~~ 163 (343)
T 3dbq_A 93 IDLNSWLKKK-----KSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS 163 (343)
T ss_dssp EEHHHHHHHS-----CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEE-TTEEEECCCSSSCCC------
T ss_pred CCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCcceEEEE-CCcEEEeecccccccCccccc
Confidence 8999999753 34899999999999999999999998 99999999999997 6789999999998764332
Q ss_pred ----CCCCCCcccCcccccC-----------CCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcc
Q 006677 497 ----TPSRSAGYRAPEVIET-----------RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEW 561 (635)
Q Consensus 497 ----~~~~~~~y~aPE~~~~-----------~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 561 (635)
...+|+.|+|||++.+ ..++.++|||||||++|||++|+.||.... +.............
T Consensus 164 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-----~~~~~~~~~~~~~~ 238 (343)
T 3dbq_A 164 VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII-----NQISKLHAIIDPNH 238 (343)
T ss_dssp ------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCC-----SHHHHHHHHHCTTS
T ss_pred ccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhh-----hHHHHHHHHhcCCc
Confidence 3458999999999864 678899999999999999999999997432 11122222222111
Q ss_pred ccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 006677 562 TAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMI 608 (635)
Q Consensus 562 ~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L 608 (635)
.... . ......+.+++.+||+.||++|||+.|++++-
T Consensus 239 ~~~~-------~---~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp 275 (343)
T 3dbq_A 239 EIEF-------P---DIPEKDLQDVLKCCLKRDPKQRISIPELLAHP 275 (343)
T ss_dssp CCCC-------C---CCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred ccCC-------c---ccCCHHHHHHHHHHcCCChhHCCCHHHHHhCc
Confidence 1110 0 01123567788899999999999999999853
No 132
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.2e-38 Score=336.36 Aligned_cols=190 Identities=26% Similarity=0.433 Sum_probs=154.8
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccCC---hHHHHHHHHHHHhhcCCCceeceeEEEEeCC--eeEEEEEec
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKD--EKLLVYDYF 416 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~--~~~lv~e~~ 416 (635)
.+.||+|+||.||+|... +++.||||++...... ...+.+|+.++.++.+||||+++++++...+ ..|+||||+
T Consensus 14 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~lv~e~~ 93 (388)
T 3oz6_A 14 VKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYM 93 (388)
T ss_dssp EEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEEEEECC
T ss_pred EEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEEEeccc
Confidence 468999999999999964 5789999998755332 3457789999999956999999999998654 689999999
Q ss_pred cCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCC--
Q 006677 417 ASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV-- 494 (635)
Q Consensus 417 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~-- 494 (635)
+ |+|.+++... .+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 94 ~-~~L~~~~~~~------~~~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 163 (388)
T 3oz6_A 94 E-TDLHAVIRAN------ILEPVHKQYVVYQLIKVIKYLHSGG---LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIR 163 (388)
T ss_dssp S-EEHHHHHHHT------CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEESSSCC
T ss_pred C-cCHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHeEEcCCCCEEecCCcccccccccc
Confidence 7 5999998742 4899999999999999999999998 99999999999999999999999999975432
Q ss_pred -----------------------CCCCCCCCcccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCCCCC
Q 006677 495 -----------------------PATPSRSAGYRAPEVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPT 542 (635)
Q Consensus 495 -----------------------~~~~~~~~~y~aPE~~~~-~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~ 542 (635)
.....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||.+.+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~ 235 (388)
T 3oz6_A 164 RVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSS 235 (388)
T ss_dssp CCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred cccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 112357888999999976 678999999999999999999999998653
No 133
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=5.1e-39 Score=325.07 Aligned_cols=239 Identities=22% Similarity=0.421 Sum_probs=176.7
Q ss_pred hccccccCceEEEEEEe-cCCCeEEEEEeeccc----CChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEecc
Q 006677 343 AEVLGKGSYGTAYKAVL-EESTTVVVKRLKEVV----VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 417 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 417 (635)
.+.||+|+||.||+|.. .+++.||+|++.... ...+.+.+|++++.++ +||||+++++++.+.+..++||||++
T Consensus 16 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~ 94 (278)
T 3cok_A 16 GNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQL-KHPSILELYNYFEDSNYVYLVLEMCH 94 (278)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTB-CCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred eeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhC-CCCCeEeEEEEEccCCeEEEEEecCC
Confidence 46899999999999997 468899999997542 1246788999999999 89999999999999999999999999
Q ss_pred CCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCCC-
Q 006677 418 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA- 496 (635)
Q Consensus 418 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~~- 496 (635)
+++|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 95 ~~~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~ 167 (278)
T 3cok_A 95 NGEMNRYLKNRV----KPFSENEARHFMHQIITGMLYLHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHE 167 (278)
T ss_dssp TEEHHHHHHTCS----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECSSCCGGGEEECTTCCEEECCCTTCEECC----
T ss_pred CCcHHHHHhhcc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEEEeecceeeccCCCC
Confidence 999999997532 35899999999999999999999998 9999999999999999999999999987654322
Q ss_pred ---CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcc
Q 006677 497 ---TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRF 573 (635)
Q Consensus 497 ---~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 573 (635)
...+++.|+|||.+.+..++.++||||||+++|||++|+.||......+... ....... . ..
T Consensus 168 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~------~~~~~~~-------~--~~ 232 (278)
T 3cok_A 168 KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLN------KVVLADY-------E--MP 232 (278)
T ss_dssp ------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----------CCSSCC-------C--CC
T ss_pred cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHH------HHhhccc-------C--Cc
Confidence 3457889999999999889999999999999999999999998654332211 1110000 0 00
Q ss_pred cChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006677 574 QNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 574 ~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 607 (635)
......+.+++.+||+.||++|||++|++++
T Consensus 233 ---~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 263 (278)
T 3cok_A 233 ---SFLSIEAKDLIHQLLRRNPADRLSLSSVLDH 263 (278)
T ss_dssp ---TTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred ---cccCHHHHHHHHHHcccCHhhCCCHHHHhcC
Confidence 1122356678889999999999999999863
No 134
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.8e-39 Score=336.06 Aligned_cols=279 Identities=18% Similarity=0.293 Sum_probs=200.0
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccCC--hHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEeccCC
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG--KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASG 419 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~--~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g 419 (635)
.+.||+|+||+||+|... +++.||+|++...... ...+.+|++++.++ +||||+++++++...+..++||||++ |
T Consensus 7 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~-~ 84 (324)
T 3mtl_A 7 LDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDL-KHANIVTLHDIIHTEKSLTLVFEYLD-K 84 (324)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCC-CCTTBCCEEEEEECSSCEEEEEECCS-E
T ss_pred EEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhc-CCCCCCeeeeEEeeCCEEEEEecccc-c
Confidence 467999999999999976 5788999998754322 22455789999999 89999999999999999999999997 5
Q ss_pred ChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCCC---
Q 006677 420 SLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA--- 496 (635)
Q Consensus 420 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~~--- 496 (635)
+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 85 ~l~~~~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~ 157 (324)
T 3mtl_A 85 DLKQYLDDCG----NIINMHNVKLFLFQLLRGLAYCHRQK---VLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTY 157 (324)
T ss_dssp EHHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHHTT---EEESSCCGGGEEECTTCCEEECSSSEEECC-------
T ss_pred CHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCcCHHHEEECCCCCEEEccCcccccccCCcccc
Confidence 9998887532 34899999999999999999999998 9999999999999999999999999987654322
Q ss_pred -CCCCCCcccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhh----ccccccchhhh
Q 006677 497 -TPSRSAGYRAPEVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVRE----EWTAEVFDVEL 570 (635)
Q Consensus 497 -~~~~~~~y~aPE~~~~-~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~d~~~ 570 (635)
...+|+.|+|||++.+ ..++.++|||||||++|||++|+.||.+....+ ....+...... .|.........
T Consensus 158 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~ 234 (324)
T 3mtl_A 158 DNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEE---QLHFIFRILGTPTEETWPGILSNEEF 234 (324)
T ss_dssp -----CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHHHHHHCCCCTTTSTTGGGCHHH
T ss_pred ccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHHhCCCChHhchhhhcchhh
Confidence 2346889999999876 568999999999999999999999998654222 11111111111 01000000000
Q ss_pred hc-------cc----ChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHHHhhccCCCCCCCCccCCCCCCCCC
Q 006677 571 MR-------FQ----NIEEEMVQMLQIGMACVAKVPDMRPNMDEVVR--MIEEVRQSDSENRPSSEENKSKDSNVQ 633 (635)
Q Consensus 571 ~~-------~~----~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~--~L~~~~~~~~~~~~~~~~~~~~~~~~~ 633 (635)
.. .. ........+.+++.+|++.||++|||++|+++ .+..+.+..............++-+.|
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~~~~~~~~~~~~~~~~~~~q 310 (324)
T 3mtl_A 235 KTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGERIHKLPDTTSIFALKEIQLQ 310 (324)
T ss_dssp HHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCSTTSSSCTTSCGGGSTTCCCC
T ss_pred cccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhhhhcccccccCCCCCcHhHHHHHHhh
Confidence 00 00 00111235678888999999999999999998 566665544433333333333444444
No 135
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=5.4e-39 Score=330.55 Aligned_cols=256 Identities=21% Similarity=0.333 Sum_probs=193.3
Q ss_pred hccccccCceEEEEEEe-cCCCeEEEEEeecccCC----hHHHHHHHHHHHhhcCCCceeceeEEEEeCCee----EEEE
Q 006677 343 AEVLGKGSYGTAYKAVL-EESTTVVVKRLKEVVVG----KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEK----LLVY 413 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~----~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~----~lv~ 413 (635)
.+.||+|+||+||+|.. .+++.||+|++...... ...+.+|++++.++ +||||+++++++...... ++||
T Consensus 17 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~~~~~lv~ 95 (311)
T 3ork_A 17 GEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL-NHPAIVAVYDTGEAETPAGPLPYIVM 95 (311)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCC-CCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcC-CCCCcceEEEeeeccCCCCcccEEEE
Confidence 46899999999999996 46788999999765332 24577888888888 899999999998876543 9999
Q ss_pred EeccCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCC
Q 006677 414 DYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN 493 (635)
Q Consensus 414 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~ 493 (635)
||+++|+|.++++.. ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++....
T Consensus 96 e~~~g~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~ 167 (311)
T 3ork_A 96 EYVDGVTLRDIVHTE-----GPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIA 167 (311)
T ss_dssp ECCCEEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEETTSCEEECCCSCC----
T ss_pred ecCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---CCcCCCCHHHEEEcCCCCEEEeeccCccccc
Confidence 999999999999743 24899999999999999999999998 9999999999999999999999999997654
Q ss_pred CCC-------CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccc
Q 006677 494 VPA-------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVF 566 (635)
Q Consensus 494 ~~~-------~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 566 (635)
... ...+++.|+|||++.+..++.++||||||+++|||++|+.||..... ..............
T Consensus 168 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~------~~~~~~~~~~~~~~--- 238 (311)
T 3ork_A 168 DSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP------VSVAYQHVREDPIP--- 238 (311)
T ss_dssp --------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH------HHHHHHHHHCCCCC---
T ss_pred ccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh------HHHHHHHhcCCCCC---
Confidence 321 23478899999999999999999999999999999999999975432 11122222111110
Q ss_pred hhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHH-HHHHHhhccCCCCCCC
Q 006677 567 DVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVV-RMIEEVRQSDSENRPS 621 (635)
Q Consensus 567 d~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl-~~L~~~~~~~~~~~~~ 621 (635)
... ... .....+.+++.+||+.||++||++.+++ ..+..+........+.
T Consensus 239 -~~~-~~~---~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~~~~~~~~~ 289 (311)
T 3ork_A 239 -PSA-RHE---GLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAPK 289 (311)
T ss_dssp -HHH-HST---TCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHTTCCCSSCC
T ss_pred -ccc-ccC---CCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHhcCCCCCCCc
Confidence 000 011 1224567788899999999999766555 5666666554444333
No 136
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=4.6e-39 Score=334.38 Aligned_cols=252 Identities=23% Similarity=0.376 Sum_probs=184.2
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccC-ChHHHHHHHHHHHhhcCCCceeceeEEEEe--------CCeeEEE
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV-GKRDFEQQMEIVGRVGQHPNVVPLRAYYYS--------KDEKLLV 412 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~e~~~l~~l~~h~niv~l~~~~~~--------~~~~~lv 412 (635)
.++||+|+||.||+|... +++.||+|++..... ..+.+.+|+.++.++.+||||+++++++.. ....++|
T Consensus 33 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~~lv 112 (337)
T 3ll6_A 33 RRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLL 112 (337)
T ss_dssp EEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEEEEEE
T ss_pred EEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCceEEEE
Confidence 578999999999999965 578999999865432 345688999999999669999999999953 3347899
Q ss_pred EEeccCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCC
Q 006677 413 YDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM 492 (635)
Q Consensus 413 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~ 492 (635)
|||+. |+|.+++..... ...+++..+..++.||+.||+|||+.+ ++|+||||||+|||++.++.+||+|||++...
T Consensus 113 ~e~~~-g~L~~~l~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~-~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~ 188 (337)
T 3ll6_A 113 TELCK-GQLVEFLKKMES--RGPLSCDTVLKIFYQTCRAVQHMHRQK-PPIIHRDLKVENLLLSNQGTIKLCDFGSATTI 188 (337)
T ss_dssp EECCS-EEHHHHHHHHHT--TCSCCHHHHHHHHHHHHHHHHHHHTSS-SCCBCCCCCGGGCEECTTSCEEBCCCTTCBCC
T ss_pred EEecC-CCHHHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHhCC-CCEEEccCCcccEEECCCCCEEEecCccceec
Confidence 99996 699998864321 235999999999999999999999975 46999999999999999999999999999776
Q ss_pred CCCC----------------CCCCCCcccCcccc---cCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHH
Q 006677 493 NVPA----------------TPSRSAGYRAPEVI---ETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWV 553 (635)
Q Consensus 493 ~~~~----------------~~~~~~~y~aPE~~---~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~ 553 (635)
.... ...+++.|+|||++ .+..++.++|||||||++|||++|+.||.........
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~------ 262 (337)
T 3ll6_A 189 SHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRIV------ 262 (337)
T ss_dssp SSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC---------------
T ss_pred cccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHHhh------
Confidence 4322 22378889999998 5667889999999999999999999999754322110
Q ss_pred HHHhhhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhccCCCC
Q 006677 554 QSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSEN 618 (635)
Q Consensus 554 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~~~~~~~ 618 (635)
....... .. ......+.+++.+||+.||++|||+.|++++|+.+.......
T Consensus 263 ----~~~~~~~-------~~---~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~~~~ 313 (337)
T 3ll6_A 263 ----NGKYSIP-------PH---DTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARNVN 313 (337)
T ss_dssp -------CCCC-------TT---CCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHTTCC
T ss_pred ----cCcccCC-------cc---cccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccCCC
Confidence 0000000 00 011123567888999999999999999999999998766543
No 137
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=3.9e-39 Score=326.53 Aligned_cols=246 Identities=24% Similarity=0.372 Sum_probs=196.1
Q ss_pred hccccccCceEEEEEEecCC----CeEEEEEeecccC--ChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEec
Q 006677 343 AEVLGKGSYGTAYKAVLEES----TTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYF 416 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~~~----~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~ 416 (635)
.+.||+|+||+||+|...+. ..||+|++..... ..+.+.+|++++.++ +||||+++++++.+ +..++||||+
T Consensus 17 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~-~~~~~v~e~~ 94 (281)
T 3cc6_A 17 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNL-DHPHIVKLIGIIEE-EPTWIIMELY 94 (281)
T ss_dssp EEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHH-CCTTBCCEEEEECS-SSCEEEEECC
T ss_pred EEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhC-CCCCcceEEEEEcC-CCCEEEEecC
Confidence 56899999999999986532 3599999876432 346788999999999 99999999999764 5678999999
Q ss_pred cCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCCC
Q 006677 417 ASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA 496 (635)
Q Consensus 417 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~~ 496 (635)
++++|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 95 ~~~~L~~~l~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 167 (281)
T 3cc6_A 95 PYGELGHYLERNK----NSLKVLTLVLYSLQICKAMAYLESIN---CVHRDIAVRNILVASPECVKLGDFGLSRYIEDED 167 (281)
T ss_dssp TTCBHHHHHHHHT----TTCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEEEETTEEEECCCCGGGCC----
T ss_pred CCCCHHHHHHhcc----ccCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCccceEEECCCCcEEeCccCCCccccccc
Confidence 9999999997532 34899999999999999999999998 9999999999999999999999999987664332
Q ss_pred -----CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhh
Q 006677 497 -----TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVEL 570 (635)
Q Consensus 497 -----~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 570 (635)
...+++.|+|||++.+..++.++||||||+++|||++ |+.||......+ .. .........
T Consensus 168 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~---~~---~~~~~~~~~-------- 233 (281)
T 3cc6_A 168 YYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD---VI---GVLEKGDRL-------- 233 (281)
T ss_dssp -----CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGG---HH---HHHHHTCCC--------
T ss_pred ccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHH---HH---HHHhcCCCC--------
Confidence 2335678999999998899999999999999999998 999997543322 11 111111100
Q ss_pred hcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhcc
Q 006677 571 MRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQS 614 (635)
Q Consensus 571 ~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~~~ 614 (635)
.........+.+++.+||+.||++|||+.|++++|+++.+.
T Consensus 234 ---~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~ 274 (281)
T 3cc6_A 234 ---PKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQM 274 (281)
T ss_dssp ---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ---CCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHh
Confidence 00011224567788899999999999999999999998764
No 138
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=3e-39 Score=333.38 Aligned_cols=257 Identities=22% Similarity=0.354 Sum_probs=187.2
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccC--ChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEeccCC
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASG 419 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g 419 (635)
.+.||+|+||+||+|... +++.||+|+++.... ..+.+.+|++++.++ +||||+++++++..++..++||||++ |
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~-~ 87 (317)
T 2pmi_A 10 LEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKEL-KHENIVRLYDVIHTENKLTLVFEFMD-N 87 (317)
T ss_dssp ---------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTC-CBTTBCCEEEEECCTTEEEEEEECCC-C
T ss_pred eeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhc-CCCCcceEEEEEEECCeEEEEEEecC-C
Confidence 467999999999999965 578899999975432 346788999999999 89999999999999999999999998 5
Q ss_pred ChhhhccCCC-CCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCC---
Q 006677 420 SLSTLLHGNR-GAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP--- 495 (635)
Q Consensus 420 ~L~~~l~~~~-~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~--- 495 (635)
+|.+++.... ......+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 88 ~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~ 164 (317)
T 2pmi_A 88 DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK---ILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNT 164 (317)
T ss_dssp BHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCSSCEETTSCCCC
T ss_pred CHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCChHHeEEcCCCCEEECcCccceecCCCccc
Confidence 9999886432 112235899999999999999999999998 999999999999999999999999999765432
Q ss_pred -CCCCCCCcccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhc---ccccc-----
Q 006677 496 -ATPSRSAGYRAPEVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREE---WTAEV----- 565 (635)
Q Consensus 496 -~~~~~~~~y~aPE~~~~-~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~~----- 565 (635)
....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||......+. ...+....... .....
T Consensus 165 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~---~~~i~~~~~~~~~~~~~~~~~~~~ 241 (317)
T 2pmi_A 165 FSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQ---LKLIFDIMGTPNESLWPSVTKLPK 241 (317)
T ss_dssp CCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH---HHHHHHHHCSCCTTTCGGGGGCTT
T ss_pred CCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH---HHHHHHHhCCCChhHhhhhhhhhh
Confidence 23457889999999976 4689999999999999999999999976432211 11111111000 00000
Q ss_pred chhhhh-----------cccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006677 566 FDVELM-----------RFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 566 ~d~~~~-----------~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 607 (635)
+..... ...........+.+++.+||+.||++|||++|++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h 294 (317)
T 2pmi_A 242 YNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH 294 (317)
T ss_dssp CCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred cccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCC
Confidence 000000 000000122357788889999999999999999874
No 139
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=6.7e-39 Score=359.93 Aligned_cols=243 Identities=24% Similarity=0.348 Sum_probs=196.3
Q ss_pred ccccccCceEEEEEEec---CCCeEEEEEeecccCC---hHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEecc
Q 006677 344 EVLGKGSYGTAYKAVLE---ESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 417 (635)
Q Consensus 344 ~~lG~G~fg~Vy~~~~~---~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 417 (635)
+.||+|+||+||+|.+. .++.||||+++..... .+++.+|++++.++ +|||||++++++. .+..++||||++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~-~~~~~lv~E~~~ 452 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQL-DNPYIVRMIGICE-AESWMLVMEMAE 452 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHC-CCTTBCCEEEEEE-SSSEEEEEECCT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEe-cCCEEEEEEccC
Confidence 47999999999999753 3568999999865432 46799999999999 8999999999986 456889999999
Q ss_pred CCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCCC-
Q 006677 418 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA- 496 (635)
Q Consensus 418 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~~- 496 (635)
+|+|.++++.. ..+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 453 ~g~L~~~l~~~-----~~l~~~~~~~i~~qi~~~L~yLH~~~---iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~ 524 (635)
T 4fl3_A 453 LGPLNKYLQQN-----RHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 524 (635)
T ss_dssp TEEHHHHHHHC-----TTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCTTHHHHTTC---
T ss_pred CCCHHHHHhhC-----CCCCHHHHHHHHHHHHHHHHHHHHCC---EeCCCCChHhEEEeCCCCEEEEEcCCccccccCcc
Confidence 99999999743 34899999999999999999999998 9999999999999999999999999987654322
Q ss_pred ------CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccchhh
Q 006677 497 ------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVE 569 (635)
Q Consensus 497 ------~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 569 (635)
...+++.|+|||++.+..++.++|||||||++|||++ |+.||.+....+ +...+.......
T Consensus 525 ~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~-------~~~~i~~~~~~~----- 592 (635)
T 4fl3_A 525 YYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE-------VTAMLEKGERMG----- 592 (635)
T ss_dssp ----------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH-------HHHHHHTTCCCC-----
T ss_pred ccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH-------HHHHHHcCCCCC-----
Confidence 1224567999999999999999999999999999998 999997654221 111111111110
Q ss_pred hhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhc
Q 006677 570 LMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQ 613 (635)
Q Consensus 570 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~~ 613 (635)
........+.+++.+||+.||++||+++++++.|+++..
T Consensus 593 -----~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~ 631 (635)
T 4fl3_A 593 -----CPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY 631 (635)
T ss_dssp -----CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred -----CCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence 111223467788889999999999999999999998764
No 140
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=1.8e-39 Score=336.62 Aligned_cols=258 Identities=24% Similarity=0.363 Sum_probs=198.1
Q ss_pred hccccccCceEEEEEEe-----cCCCeEEEEEeecccC-ChHHHHHHHHHHHhhcCCCceeceeEEEEe--CCeeEEEEE
Q 006677 343 AEVLGKGSYGTAYKAVL-----EESTTVVVKRLKEVVV-GKRDFEQQMEIVGRVGQHPNVVPLRAYYYS--KDEKLLVYD 414 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~-----~~~~~vavK~l~~~~~-~~~~~~~e~~~l~~l~~h~niv~l~~~~~~--~~~~~lv~e 414 (635)
.+.||+|+||.||+|.+ .++..||||++..... ..+.+.+|++++.++ +||||+++++++.. ....++|||
T Consensus 28 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~~lv~e 106 (327)
T 3lxl_A 28 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKAL-HSDFIVKYRGVSYGPGRQSLRLVME 106 (327)
T ss_dssp EEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSSCEEEEEEE
T ss_pred hhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhc-CCCceeEEEEEEecCCCceEEEEEe
Confidence 56899999999999984 3578899999876532 245689999999999 99999999999874 456889999
Q ss_pred eccCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCC
Q 006677 415 YFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV 494 (635)
Q Consensus 415 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~ 494 (635)
|+++|+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.....
T Consensus 107 ~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~ 179 (327)
T 3lxl_A 107 YLPSGCLRDFLQRHR----ARLDASRLLLYSSQICKGMEYLGSRR---CVHRDLAARNILVESEAHVKIADFGLAKLLPL 179 (327)
T ss_dssp CCTTCBHHHHHHHHG----GGCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCGGGCEECCT
T ss_pred ecCCCCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCChhhEEECCCCCEEEcccccceeccc
Confidence 999999999997532 24899999999999999999999998 99999999999999999999999999976543
Q ss_pred CC-------CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCC--------CCCChhHHHHHHhhh
Q 006677 495 PA-------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRD--------DMVDLPRWVQSVVRE 559 (635)
Q Consensus 495 ~~-------~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~--------~~~~~~~~~~~~~~~ 559 (635)
.. ...++..|+|||++.+..++.++||||||+++|||++|..||...... ...............
T Consensus 180 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (327)
T 3lxl_A 180 DKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEE 259 (327)
T ss_dssp TCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHT
T ss_pred CCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhhc
Confidence 22 234667799999999888999999999999999999999998643210 000000111111111
Q ss_pred ccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhccCCCC
Q 006677 560 EWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSEN 618 (635)
Q Consensus 560 ~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~~~~~~~ 618 (635)
.. ...........+.+++.+||+.||++|||++|++++|+.+.......
T Consensus 260 ~~----------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~~ 308 (327)
T 3lxl_A 260 GQ----------RLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSRGC 308 (327)
T ss_dssp TC----------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC-------
T ss_pred cc----------CCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhcCc
Confidence 10 01111223345778888999999999999999999999998766543
No 141
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=7.7e-39 Score=329.62 Aligned_cols=254 Identities=23% Similarity=0.390 Sum_probs=192.6
Q ss_pred hhccccccCceEEEEEEecC----CCeEEEEEeecccCC---hHHHHHHHHHHHhhcCCCceeceeEEEEeCCe-----e
Q 006677 342 SAEVLGKGSYGTAYKAVLEE----STTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDE-----K 409 (635)
Q Consensus 342 ~~~~lG~G~fg~Vy~~~~~~----~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~-----~ 409 (635)
..+.||+|+||.||+|.... +..||+|+++..... .+.+.+|+.++.++ +||||+++++++...+. .
T Consensus 38 ~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~ 116 (313)
T 3brb_A 38 LGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDF-SHPNVIRLLGVCIEMSSQGIPKP 116 (313)
T ss_dssp EEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTC-CCTTBCCCCEEEEC-------CE
T ss_pred eccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcC-CCCCeeeeeEEEeeccccCCccc
Confidence 35789999999999998643 347999998765433 35688899999999 89999999999987653 4
Q ss_pred EEEEEeccCCChhhhccCCC-CCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCC
Q 006677 410 LLVYDYFASGSLSTLLHGNR-GAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGL 488 (635)
Q Consensus 410 ~lv~e~~~~g~L~~~l~~~~-~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGl 488 (635)
++||||+++|+|.+++.... ......+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+
T Consensus 117 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dikp~NIli~~~~~~kl~Dfg~ 193 (313)
T 3brb_A 117 MVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRN---FLHRDLAARNCMLRDDMTVCVADFGL 193 (313)
T ss_dssp EEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTT---CCCCCCSGGGEEECTTSCEEECSCSC
T ss_pred EEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCcEEEeecCc
Confidence 99999999999999985332 122345999999999999999999999998 99999999999999999999999999
Q ss_pred CCCCCCCC------CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhcc
Q 006677 489 TPLMNVPA------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEW 561 (635)
Q Consensus 489 a~~~~~~~------~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 561 (635)
+....... ...+++.|+|||.+.+..++.++||||||+++|||++ |..||......+ ..........
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~------~~~~~~~~~~ 267 (313)
T 3brb_A 194 SKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHE------MYDYLLHGHR 267 (313)
T ss_dssp C----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG------HHHHHHTTCC
T ss_pred ceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHH------HHHHHHcCCC
Confidence 97654322 2235678999999999999999999999999999999 889997644322 1111111110
Q ss_pred ccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhccCC
Q 006677 562 TAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDS 616 (635)
Q Consensus 562 ~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~~~~~ 616 (635)
. .........+.+++.+||+.+|++|||+.|++++|+++.+..+
T Consensus 268 ~-----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~lp 311 (313)
T 3brb_A 268 L-----------KQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESLP 311 (313)
T ss_dssp C-----------CCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC-
T ss_pred C-----------CCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcC
Confidence 0 0111223457788889999999999999999999999987654
No 142
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=6e-39 Score=325.28 Aligned_cols=243 Identities=21% Similarity=0.383 Sum_probs=196.8
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccCChHHHHHHHHHHHhhcCCCceeceeEEEEe----------------
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYS---------------- 405 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~---------------- 405 (635)
.+.||+|+||.||+|... +++.||+|++... ...+.+|++++.++ +||||+++++++..
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (284)
T 2a19_B 16 IELIGSGGFGQVFKAKHRIDGKTYVIKRVKYN---NEKAEREVKALAKL-DHVNIVHYNGCWDGFDYDPETSSKNSSRSK 91 (284)
T ss_dssp EEEEECSSSCCEEEEEETTTCCEEEEEEEECC---SGGGHHHHHHHHHC-CCTTBCCEEEEEEEEEEC---------CCE
T ss_pred eeeeccCCceEEEEEEEcCCCeEEEEEEeccc---cHHHHHHHHHHHhC-CCCCEEEEeeeEeccccCcccccccccccC
Confidence 578999999999999976 6889999998754 35678899999999 99999999999864
Q ss_pred CCeeEEEEEeccCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEee
Q 006677 406 KDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISD 485 (635)
Q Consensus 406 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~D 485 (635)
....++||||+++|+|.+++.... ...+++..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+|
T Consensus 92 ~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~D 165 (284)
T 2a19_B 92 TKCLFIQMEFCDKGTLEQWIEKRR---GEKLDKVLALELFEQITKGVDYIHSKK---LINRDLKPSNIFLVDTKQVKIGD 165 (284)
T ss_dssp EEEEEEEECCCCSCBHHHHHHHGG---GSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECC
T ss_pred cceEEEEEeccCCCCHHHHHhhcc---CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCCHHHEEEcCCCCEEECc
Confidence 345789999999999999997543 234899999999999999999999998 99999999999999999999999
Q ss_pred cCCCCCCCCC---CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccc
Q 006677 486 FGLTPLMNVP---ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWT 562 (635)
Q Consensus 486 fGla~~~~~~---~~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (635)
||++...... ....+++.|+|||++.+..++.++||||||+++|||++|..|+... ....... .....
T Consensus 166 fg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~--------~~~~~~~-~~~~~ 236 (284)
T 2a19_B 166 FGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET--------SKFFTDL-RDGII 236 (284)
T ss_dssp CTTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH--------HHHHHHH-HTTCC
T ss_pred chhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH--------HHHHHHh-hcccc
Confidence 9998765443 2345788999999999999999999999999999999999887421 1111111 11111
Q ss_pred cccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhccCCC
Q 006677 563 AEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSE 617 (635)
Q Consensus 563 ~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~~~~~~ 617 (635)
.. . ....+.+++.+||+.||++|||+.|++++|+.+......
T Consensus 237 ~~----------~---~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~~ 278 (284)
T 2a19_B 237 SD----------I---FDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPEK 278 (284)
T ss_dssp CT----------T---SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC----
T ss_pred cc----------c---CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCCc
Confidence 10 1 123456788899999999999999999999999866543
No 143
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=4.8e-39 Score=330.76 Aligned_cols=253 Identities=20% Similarity=0.318 Sum_probs=191.7
Q ss_pred hccccccCceEEEEEEecC-CCeEEEEEeecccCC---hHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEeccC
Q 006677 343 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS 418 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~ 418 (635)
.+.||+|+||+||+|.... ++.||+|++...... .+.+.+|++++.++ +||||+++++++...+..++||||+++
T Consensus 8 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~ 86 (311)
T 4agu_A 8 IGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQL-KHPNLVNLLEVFRRKRRLHLVFEYCDH 86 (311)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEEECCSE
T ss_pred eeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhC-CCCCccchhheeecCCeEEEEEEeCCC
Confidence 4689999999999999764 889999998765433 35677899999999 899999999999999999999999999
Q ss_pred CChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCCC--
Q 006677 419 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA-- 496 (635)
Q Consensus 419 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~~-- 496 (635)
++|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 87 ~~l~~~~~~~-----~~~~~~~~~~i~~~l~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 158 (311)
T 4agu_A 87 TVLHELDRYQ-----RGVPEHLVKSITWQTLQAVNFCHKHN---CIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDY 158 (311)
T ss_dssp EHHHHHHHTS-----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred chHHHHHhhh-----cCCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCCChhhEEEcCCCCEEEeeCCCchhccCcccc
Confidence 9999988643 34899999999999999999999998 9999999999999999999999999997665322
Q ss_pred --CCCCCCcccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhh------------hcc
Q 006677 497 --TPSRSAGYRAPEVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVR------------EEW 561 (635)
Q Consensus 497 --~~~~~~~y~aPE~~~~-~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~------------~~~ 561 (635)
...+++.|+|||++.+ ..++.++||||||+++|||++|+.||......+.. ........ ..+
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 235 (311)
T 4agu_A 159 YDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQL---YLIRKTLGDLIPRHQQVFSTNQY 235 (311)
T ss_dssp -------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH---HHHHHHHCSCCHHHHHHHHTCGG
T ss_pred cCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHH---HHHHHHhcccccccccccccccc
Confidence 3357888999999976 56899999999999999999999999765422211 11111110 000
Q ss_pred ccccchhhhhcccC----hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006677 562 TAEVFDVELMRFQN----IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 562 ~~~~~d~~~~~~~~----~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 607 (635)
......+....... .......+.+++.+||+.||++|||++|++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 236 FSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp GTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred cccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 00000000000000 01223456788889999999999999999974
No 144
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=2.5e-38 Score=343.30 Aligned_cols=254 Identities=19% Similarity=0.234 Sum_probs=201.7
Q ss_pred hccccccCceEEEEEEe-cCCCeEEEEEeecccCChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEeccCCCh
Q 006677 343 AEVLGKGSYGTAYKAVL-EESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSL 421 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 421 (635)
.++||+|+||.||+|.. .+++.||||++.... ...++.+|++++..+.+|+++..+..++...+..++||||+ +++|
T Consensus 12 ~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-~~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~-g~sL 89 (483)
T 3sv0_A 12 GRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-KHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL-GPSL 89 (483)
T ss_dssp CCCCEECSSCEEEEEEETTTCCEEEEEEEETTC-SSCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC-CCBH
T ss_pred EEEEeeCCCEEEEEEEECCCCcEEEEEEecccc-ccHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC-CCCH
Confidence 46799999999999996 458899999876543 34568899999999966678888888888888999999999 8999
Q ss_pred hhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEE---cCCCCeEEeecCCCCCCCCCC--
Q 006677 422 STLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLI---NQDLDGCISDFGLTPLMNVPA-- 496 (635)
Q Consensus 422 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll---~~~~~~ki~DfGla~~~~~~~-- 496 (635)
.+++.... ..+++..++.|+.||+.||+|||+++ |+||||||+|||+ +.++.+||+|||+++......
T Consensus 90 ~~ll~~~~----~~l~~~~~~~i~~qi~~aL~yLH~~g---IvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 162 (483)
T 3sv0_A 90 EDLFNFCS----RKLSLKTVLMLADQMINRVEFVHSKS---FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTH 162 (483)
T ss_dssp HHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTC
T ss_pred HHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccCcceEEEecCCCCCeEEEEeCCcceeccCCccc
Confidence 99997432 24999999999999999999999998 9999999999999 688999999999997654322
Q ss_pred ---------CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccch
Q 006677 497 ---------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFD 567 (635)
Q Consensus 497 ---------~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 567 (635)
...+|+.|+|||++.+..++.++|||||||++|||++|+.||........... ...+...... ....
T Consensus 163 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~---~~~i~~~~~~-~~~~ 238 (483)
T 3sv0_A 163 QHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQK---YEKISEKKVA-TSIE 238 (483)
T ss_dssp CBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHH---HHHHHHHHHH-SCHH
T ss_pred cccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHH---HHHHhhcccc-ccHH
Confidence 34578899999999999999999999999999999999999987554332111 1111111110 0000
Q ss_pred hhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhccC
Q 006677 568 VELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 615 (635)
Q Consensus 568 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~~~~ 615 (635)
... .....++.+++..||+.+|++||++.+|++.|+++....
T Consensus 239 ~l~------~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~~ 280 (483)
T 3sv0_A 239 ALC------RGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIRE 280 (483)
T ss_dssp HHH------TTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred HHh------cCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHHc
Confidence 000 011246778888999999999999999999999997644
No 145
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.6e-39 Score=343.44 Aligned_cols=242 Identities=17% Similarity=0.270 Sum_probs=192.8
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccC----ChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEecc
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV----GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 417 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~----~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 417 (635)
.++||+|+||+||+|+.. +++.||+|++.+... ..+.+.+|..++..+ +||||+++++++.+.+..|+||||++
T Consensus 66 ~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~-~hp~Iv~l~~~~~~~~~~~lVmE~~~ 144 (412)
T 2vd5_A 66 LKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNG-DRRWITQLHFAFQDENYLYLVMEYYV 144 (412)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHS-CTTTBCCEEEEEECSSEEEEEECCCC
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhc-CCCCeeeEEEEEeeCCEEEEEEcCCC
Confidence 468999999999999975 588999999975321 234578899999998 99999999999999999999999999
Q ss_pred CCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCCC-
Q 006677 418 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA- 496 (635)
Q Consensus 418 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~~- 496 (635)
+|+|.+++.... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 145 gg~L~~~l~~~~----~~l~~~~~~~~~~qi~~aL~~LH~~g---iiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~~ 217 (412)
T 2vd5_A 145 GGDLLTLLSKFG----ERIPAEMARFYLAEIVMAIDSVHRLG---YVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGT 217 (412)
T ss_dssp SCBHHHHHHHHS----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCTTSC
T ss_pred CCcHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecccCHHHeeecCCCCEEEeechhheeccCCCc
Confidence 999999997432 24899999999999999999999998 9999999999999999999999999997664432
Q ss_pred ----CCCCCCcccCccccc-------CCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcccccc
Q 006677 497 ----TPSRSAGYRAPEVIE-------TRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEV 565 (635)
Q Consensus 497 ----~~~~~~~y~aPE~~~-------~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 565 (635)
...||+.|+|||++. ...++.++|||||||++|||++|+.||...+.. .....+.......
T Consensus 218 ~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~------~~~~~i~~~~~~~-- 289 (412)
T 2vd5_A 218 VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTA------ETYGKIVHYKEHL-- 289 (412)
T ss_dssp EECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHH------HHHHHHHTHHHHC--
T ss_pred cccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHH------HHHHHHHhcccCc--
Confidence 346899999999997 456899999999999999999999999754321 1222222111000
Q ss_pred chhhhhcccC-hHHHHHHHHHHHHHcccCCCCCC---CCHHHHHHH
Q 006677 566 FDVELMRFQN-IEEEMVQMLQIGMACVAKVPDMR---PNMDEVVRM 607 (635)
Q Consensus 566 ~d~~~~~~~~-~~~~~~~l~~l~~~cl~~~P~~R---Ps~~evl~~ 607 (635)
..+. .......+.+++.+|++ +|++| |+++|++++
T Consensus 290 ------~~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H 328 (412)
T 2vd5_A 290 ------SLPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTH 328 (412)
T ss_dssp ------CCC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred ------CCCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence 0000 01122356677779999 99998 589999874
No 146
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=2.8e-38 Score=324.91 Aligned_cols=256 Identities=20% Similarity=0.363 Sum_probs=194.9
Q ss_pred hccccccCceEEEEEEe-cCCCeEEEEEeecccC----ChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEecc
Q 006677 343 AEVLGKGSYGTAYKAVL-EESTTVVVKRLKEVVV----GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 417 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~----~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 417 (635)
.+.||+|+||.||+|.. .+++.||+|++..... ....+.+|++++.++ +||||+++++++...+..++||||++
T Consensus 37 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~ 115 (310)
T 2wqm_A 37 EKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQL-NHPNVIKYYASFIEDNELNIVLELAD 115 (310)
T ss_dssp EEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEEETTEEEEEEECCC
T ss_pred EEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEcCCcEEEEEecCC
Confidence 46899999999999996 4688999999975322 235688899999999 99999999999999999999999999
Q ss_pred CCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCCC-
Q 006677 418 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA- 496 (635)
Q Consensus 418 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~~- 496 (635)
+|+|.+++..... ....+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||++.......
T Consensus 116 ~~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 191 (310)
T 2wqm_A 116 AGDLSRMIKHFKK-QKRLIPERTVWKYFVQLCSALEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT 191 (310)
T ss_dssp SCBHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCC-----------
T ss_pred CCCHHHHHHHhcc-cccCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCcHHHEEEcCCCCEEEEeccceeeecCCCc
Confidence 9999999864321 1335899999999999999999999998 9999999999999999999999999987654322
Q ss_pred ---CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcc
Q 006677 497 ---TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRF 573 (635)
Q Consensus 497 ---~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 573 (635)
...+++.|+|||++.+..++.++||||||+++|||++|+.||..... ................ .. .
T Consensus 192 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~----~~~~~~~~~~~~~~~~-~~------~ 260 (310)
T 2wqm_A 192 AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM----NLYSLCKKIEQCDYPP-LP------S 260 (310)
T ss_dssp -------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---C----CHHHHHHHHHTTCSCC-CC------T
T ss_pred cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccch----hHHHHHHHhhcccCCC-Cc------c
Confidence 23478889999999999999999999999999999999999975321 2222222222211110 00 0
Q ss_pred cChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhccCCC
Q 006677 574 QNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSE 617 (635)
Q Consensus 574 ~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~~~~~~ 617 (635)
......+.+++.+||+.||++|||+.|+++.|+++......
T Consensus 261 ---~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~~ 301 (310)
T 2wqm_A 261 ---DHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTAS 301 (310)
T ss_dssp ---TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC-
T ss_pred ---cccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhhh
Confidence 11223567788899999999999999999999999876644
No 147
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=2.3e-38 Score=320.55 Aligned_cols=238 Identities=25% Similarity=0.379 Sum_probs=193.1
Q ss_pred hccccccCceEEEEEEecC-CCeEEEEEeeccc----CChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEecc
Q 006677 343 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVV----VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 417 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 417 (635)
.+.||+|+||+||+|.... +..||+|++.... .....+.+|++++.++ +||||+++++++.+.+..++||||++
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~ 92 (279)
T 3fdn_A 14 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLYGYFHDATRVYLILEYAP 92 (279)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred eeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcC-CCCCCcchhheEecCCEEEEEEecCC
Confidence 4689999999999998764 6689999986542 2356788899999999 89999999999999999999999999
Q ss_pred CCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCC--
Q 006677 418 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP-- 495 (635)
Q Consensus 418 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~-- 495 (635)
+|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 93 ~~~l~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~LH~~~---i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~~ 164 (279)
T 3fdn_A 93 LGTVYRELQKL-----SKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR 164 (279)
T ss_dssp TEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHTTT---CEECCCCGGGEEECTTSCEEECSCCEESCC-----
T ss_pred CCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---EecccCChHhEEEcCCCCEEEEeccccccCCcccc
Confidence 99999998743 24899999999999999999999998 999999999999999999999999988665433
Q ss_pred CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcccC
Q 006677 496 ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQN 575 (635)
Q Consensus 496 ~~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 575 (635)
....+++.|+|||.+.+..++.++||||||+++|||++|..||..... ......+...... .
T Consensus 165 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~~~~~~~~~~~~------------~ 226 (279)
T 3fdn_A 165 TDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY------QETYKRISRVEFT------------F 226 (279)
T ss_dssp ---CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSH------HHHHHHHHHTCCC------------C
T ss_pred cccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcH------HHHHHHHHhCCCC------------C
Confidence 234578899999999999999999999999999999999999975431 1111111111110 0
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006677 576 IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 576 ~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 607 (635)
.......+.+++.+||+.||++|||++|++++
T Consensus 227 ~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 227 PDFVTEGARDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp CTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred CCcCCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 01122356678889999999999999999985
No 148
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=5.1e-38 Score=324.77 Aligned_cols=243 Identities=21% Similarity=0.338 Sum_probs=197.7
Q ss_pred hhccccccCceEEEEEEec-CCCeEEEEEeecccC-------ChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEE
Q 006677 342 SAEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV-------GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVY 413 (635)
Q Consensus 342 ~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-------~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~ 413 (635)
..+.||+|+||.||+|... +++.||+|++..... ..+.+.+|++++.++ +||||+++++++...+..++||
T Consensus 16 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~ 94 (321)
T 2a2a_A 16 IGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQV-LHHNVITLHDVYENRTDVVLIL 94 (321)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEE
T ss_pred EeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhC-CCCCcceEEEEEecCCEEEEEE
Confidence 3578999999999999976 578899999976532 256789999999999 8999999999999999999999
Q ss_pred EeccCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCC----CeEEeecCCC
Q 006677 414 DYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDL----DGCISDFGLT 489 (635)
Q Consensus 414 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~----~~ki~DfGla 489 (635)
||+++++|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++ .+||+|||++
T Consensus 95 e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~lH~~~---ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~ 166 (321)
T 2a2a_A 95 ELVSGGELFDFLAQK-----ESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166 (321)
T ss_dssp CCCCSCBHHHHHHTC-----SCEEHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCTTSSSCCEEECCCTTC
T ss_pred EcCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCChHHEEEecCCCCcCCEEEccCccc
Confidence 999999999999742 34899999999999999999999998 99999999999999888 7999999999
Q ss_pred CCCCCCC---CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccc
Q 006677 490 PLMNVPA---TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVF 566 (635)
Q Consensus 490 ~~~~~~~---~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 566 (635)
....... ...+++.|+|||++.+..++.++||||||+++|||++|..||..... ......+...... +
T Consensus 167 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------~~~~~~i~~~~~~---~ 237 (321)
T 2a2a_A 167 HEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK------QETLANITSVSYD---F 237 (321)
T ss_dssp EECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH------HHHHHHHHTTCCC---C
T ss_pred eecCccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCH------HHHHHHHHhcccc---c
Confidence 7665432 34578899999999999999999999999999999999999975432 1112222111110 0
Q ss_pred hhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006677 567 DVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 567 d~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 607 (635)
+... .. .....+.+++.+|++.||++|||+.|++++
T Consensus 238 ~~~~--~~---~~~~~~~~li~~~l~~dp~~Rps~~e~l~h 273 (321)
T 2a2a_A 238 DEEF--FS---HTSELAKDFIRKLLVKETRKRLTIQEALRH 273 (321)
T ss_dssp CHHH--HT---TCCHHHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred Chhh--hc---ccCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 1110 01 112356778889999999999999999873
No 149
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=3.2e-38 Score=320.61 Aligned_cols=244 Identities=22% Similarity=0.325 Sum_probs=191.2
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccC--ChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEeccCC
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASG 419 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g 419 (635)
.+.||+|+||+||++... ++..||+|++..... ..+.+.+|++++.++ +||||+++++++.+.+..++||||+++|
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~~~ 105 (285)
T 3is5_A 27 KRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSL-DHPNIIKIFEVFEDYHNMYIVMETCEGG 105 (285)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEEECCCSCC
T ss_pred cceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhC-CCchHHhHHHheecCCeEEEEEEeCCCC
Confidence 578999999999999975 578899999876543 457899999999999 9999999999999999999999999999
Q ss_pred ChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEE---cCCCCeEEeecCCCCCCCCC-
Q 006677 420 SLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLI---NQDLDGCISDFGLTPLMNVP- 495 (635)
Q Consensus 420 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll---~~~~~~ki~DfGla~~~~~~- 495 (635)
+|.+++..... ....+++..+..++.|++.||+|||+.+ |+||||||+||++ +.++.+||+|||++......
T Consensus 106 ~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~ 181 (285)
T 3is5_A 106 ELLERIVSAQA-RGKALSEGYVAELMKQMMNALAYFHSQH---VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDE 181 (285)
T ss_dssp BHHHHHHHHHH-HTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-----
T ss_pred cHHHHHHhhhh-cccCCCHHHHHHHHHHHHHHHHHHHhCC---EEECCCCHHHEEEecCCCCCCEEEEeeecceecCCcc
Confidence 99998854321 1235899999999999999999999998 9999999999999 45688999999999765433
Q ss_pred --CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcc
Q 006677 496 --ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRF 573 (635)
Q Consensus 496 --~~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 573 (635)
....+++.|+|||++. ..++.++||||||+++|||++|+.||...... ............... ..
T Consensus 182 ~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~------~~~~~~~~~~~~~~~------~~ 248 (285)
T 3is5_A 182 HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLE------EVQQKATYKEPNYAV------EC 248 (285)
T ss_dssp -----CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHCCCCCCC--------
T ss_pred cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHH------HHHhhhccCCccccc------cc
Confidence 2345788999999986 46889999999999999999999999754311 111111111111000 00
Q ss_pred cChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006677 574 QNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 574 ~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 607 (635)
.. ....+.+++.+|++.||++|||++|++++
T Consensus 249 ~~---~~~~~~~li~~~L~~dP~~Rps~~e~l~h 279 (285)
T 3is5_A 249 RP---LTPQAVDLLKQMLTKDPERRPSAAQVLHH 279 (285)
T ss_dssp CC---CCHHHHHHHHHHTCSCTTTSCCHHHHHTS
T ss_pred Cc---CCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00 12356678889999999999999999863
No 150
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=4.2e-38 Score=323.64 Aligned_cols=251 Identities=20% Similarity=0.308 Sum_probs=192.5
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccCC----hHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEecc
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG----KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 417 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~----~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 417 (635)
.+.||+|+||.||+|... +++.||+|++...... .+.+.+|+.++.++ +||||+++++++..++..++||||++
T Consensus 39 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~ 117 (309)
T 2h34_A 39 RRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRL-QEPHVVPIHDFGEIDGQLYVDMRLIN 117 (309)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEETTEEEEEEECCC
T ss_pred EEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhc-CCCCeeEEEEEEeeCCeEEEEEEecC
Confidence 468999999999999975 5788999998765332 35688899999999 99999999999999999999999999
Q ss_pred CCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCCC-
Q 006677 418 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA- 496 (635)
Q Consensus 418 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~~- 496 (635)
+++|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 118 ~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 189 (309)
T 2h34_A 118 GVDLAAMLRRQ-----GPLAPPRAVAIVRQIGSALDAAHAAG---ATHRDVKPENILVSADDFAYLVDFGIASATTDEKL 189 (309)
T ss_dssp CEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECSCCC---------
T ss_pred CCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCc---CCcCCCChHHEEEcCCCCEEEecCccCcccccccc
Confidence 99999999743 24899999999999999999999998 9999999999999999999999999987654322
Q ss_pred ----CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhc
Q 006677 497 ----TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMR 572 (635)
Q Consensus 497 ----~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 572 (635)
...+++.|+|||++.+..++.++||||||+++|||++|+.||..... ............. .. ..
T Consensus 190 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-------~~~~~~~~~~~~~----~~-~~ 257 (309)
T 2h34_A 190 TQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQL-------SVMGAHINQAIPR----PS-TV 257 (309)
T ss_dssp -------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHH-------HHHHHHHHSCCCC----GG-GT
T ss_pred ccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchH-------HHHHHHhccCCCC----cc-cc
Confidence 33578889999999999999999999999999999999999975321 1112212111110 00 00
Q ss_pred ccChHHHHHHHHHHHHHcccCCCCCCC-CHHHHHHHHHHhhccCCC
Q 006677 573 FQNIEEEMVQMLQIGMACVAKVPDMRP-NMDEVVRMIEEVRQSDSE 617 (635)
Q Consensus 573 ~~~~~~~~~~l~~l~~~cl~~~P~~RP-s~~evl~~L~~~~~~~~~ 617 (635)
. ......+.+++.+||+.||++|| +++++++.|+++......
T Consensus 258 ~---~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~~~ 300 (309)
T 2h34_A 258 R---PGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATADQ 300 (309)
T ss_dssp S---TTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC----
T ss_pred C---CCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhhcc
Confidence 1 11223566788899999999999 999999999988766644
No 151
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=1.5e-38 Score=344.38 Aligned_cols=238 Identities=23% Similarity=0.360 Sum_probs=196.8
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeeccc----CChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEecc
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVV----VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 417 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 417 (635)
.+.||+|+||.||+|... +++.||||++.... .....+.+|+++++.+ +||||+++++++...+..++||||++
T Consensus 21 ~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~~~lv~E~~~ 99 (476)
T 2y94_A 21 GDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLF-RHPHIIKLYQVISTPSDIFMVMEYVS 99 (476)
T ss_dssp EEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEEEECCS
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEEECCEEEEEEeCCC
Confidence 468999999999999976 68899999997542 2345788999999998 89999999999999999999999999
Q ss_pred CCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCC--
Q 006677 418 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP-- 495 (635)
Q Consensus 418 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~-- 495 (635)
+|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 100 gg~L~~~l~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~~ 171 (476)
T 2y94_A 100 GGELFDYICKN-----GRLDEKESRRLFQQILSGVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF 171 (476)
T ss_dssp SEEHHHHTTSS-----SSCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCSGGGEEECTTCCEEECCCSSCEECCTTCC
T ss_pred CCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---CCcccccHHHEEEecCCCeEEEeccchhhcccccc
Confidence 99999999742 34899999999999999999999998 999999999999999999999999999876443
Q ss_pred -CCCCCCCcccCcccccCCCC-CCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcc
Q 006677 496 -ATPSRSAGYRAPEVIETRKH-SHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRF 573 (635)
Q Consensus 496 -~~~~~~~~y~aPE~~~~~~~-~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 573 (635)
....+|+.|+|||++.+..+ +.++|||||||++|||++|+.||..... ......+...... ..
T Consensus 172 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~------~~~~~~i~~~~~~---------~p 236 (476)
T 2y94_A 172 LRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHV------PTLFKKICDGIFY---------TP 236 (476)
T ss_dssp BCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSS------HHHHHHHHTTCCC---------CC
T ss_pred ccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCH------HHHHHHHhcCCcC---------CC
Confidence 24568999999999988776 6899999999999999999999975432 1222222221110 01
Q ss_pred cChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006677 574 QNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 574 ~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 607 (635)
.. ....+.+++.+||+.||++|||++|++++
T Consensus 237 ~~---~s~~~~~Li~~~L~~dP~~Rpt~~eil~h 267 (476)
T 2y94_A 237 QY---LNPSVISLLKHMLQVDPMKRATIKDIREH 267 (476)
T ss_dssp TT---CCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred cc---CCHHHHHHHHHHcCCCchhCcCHHHHHhC
Confidence 11 12346678889999999999999999983
No 152
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=3.1e-38 Score=327.25 Aligned_cols=245 Identities=17% Similarity=0.281 Sum_probs=196.2
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccC---ChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEeccC
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV---GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS 418 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~ 418 (635)
.+.||+|+||.||+|... +++.||+|+++.... ....+.+|+.++.++.+||||+++++++...+..++||||+++
T Consensus 34 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv~e~~~~ 113 (327)
T 3lm5_A 34 SKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAG 113 (327)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred cceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEEEEecCC
Confidence 378999999999999976 588999999976533 3567889999999997889999999999999999999999999
Q ss_pred CChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcC---CCCeEEeecCCCCCCCCC
Q 006677 419 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQ---DLDGCISDFGLTPLMNVP 495 (635)
Q Consensus 419 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~---~~~~ki~DfGla~~~~~~ 495 (635)
|+|.+++.... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++. ++.+||+|||+++.....
T Consensus 114 ~~L~~~~~~~~---~~~~~~~~~~~i~~ql~~~L~~LH~~g---ivH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~ 187 (327)
T 3lm5_A 114 GEIFSLCLPEL---AEMVSENDVIRLIKQILEGVYYLHQNN---IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHA 187 (327)
T ss_dssp EEGGGGGSSCC----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESCBTTBCCEEECCGGGCEEC---
T ss_pred CcHHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHCC---eecCcCChHHEEEecCCCCCcEEEeeCccccccCCc
Confidence 99999986432 235899999999999999999999998 999999999999998 789999999999776543
Q ss_pred C---CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhc
Q 006677 496 A---TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMR 572 (635)
Q Consensus 496 ~---~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 572 (635)
. ...+++.|+|||++.+..++.++||||||+++|||++|+.||......+ ....+...... ..
T Consensus 188 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~------~~~~i~~~~~~--~~------ 253 (327)
T 3lm5_A 188 CELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQE------TYLNISQVNVD--YS------ 253 (327)
T ss_dssp ------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHTCCC--CC------
T ss_pred cccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchH------HHHHHHhcccc--cC------
Confidence 2 3457899999999999999999999999999999999999997543211 11111111100 00
Q ss_pred ccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006677 573 FQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 573 ~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 607 (635)
..........+.+++.+||+.||++|||++|++++
T Consensus 254 ~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 254 EETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp TTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred chhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence 00011223456778889999999999999999875
No 153
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=6.7e-39 Score=330.63 Aligned_cols=256 Identities=20% Similarity=0.359 Sum_probs=197.1
Q ss_pred hccccccCceEEEEEEe-cCCCeEEEEEeeccc-CChHHHHHHHHHHHhhcCCCceeceeEEEEe----CCeeEEEEEec
Q 006677 343 AEVLGKGSYGTAYKAVL-EESTTVVVKRLKEVV-VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYS----KDEKLLVYDYF 416 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~-~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~----~~~~~lv~e~~ 416 (635)
.+.||+|+||.||++.. .+++.||+|++.... ...+.+.+|++++.++ +||||+++++++.. ....++||||+
T Consensus 34 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~lv~e~~ 112 (317)
T 2buj_A 34 IQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLF-NHPNILRLVAYCLRERGAKHEAWLLLPFF 112 (317)
T ss_dssp EEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTC-CCTTBCCCCEEEEEEETTEEEEEEEEECC
T ss_pred EEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhc-CCCCeeeEEEEEEeccCCCceeEEEEEeC
Confidence 47899999999999997 568899999986542 2356788999999999 99999999999873 34678999999
Q ss_pred cCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCCC
Q 006677 417 ASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA 496 (635)
Q Consensus 417 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~~ 496 (635)
++|+|.+++..... ....+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 113 ~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~ 188 (317)
T 2buj_A 113 KRGTLWNEIERLKD-KGNFLTEDQILWLLLGICRGLEAIHAKG---YAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHV 188 (317)
T ss_dssp TTCBHHHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCSSCEESCEEE
T ss_pred CCCcHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEcCCCCEEEEecCcchhccccc
Confidence 99999999975322 2345899999999999999999999998 9999999999999999999999999987653211
Q ss_pred -------------CCCCCCcccCcccccCCC---CCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhc
Q 006677 497 -------------TPSRSAGYRAPEVIETRK---HSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREE 560 (635)
Q Consensus 497 -------------~~~~~~~y~aPE~~~~~~---~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 560 (635)
...+++.|+|||++.+.. ++.++||||||+++|||++|+.||....... ....... ...
T Consensus 189 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-~~~~~~~----~~~ 263 (317)
T 2buj_A 189 EGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKG-DSVALAV----QNQ 263 (317)
T ss_dssp ESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTT-SCHHHHH----HCC
T ss_pred ccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhccc-chhhHHh----hcc
Confidence 112588899999997654 6899999999999999999999996321111 0111100 010
Q ss_pred cccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhccCCCC
Q 006677 561 WTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSEN 618 (635)
Q Consensus 561 ~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~~~~~~~ 618 (635)
. ..+........+.+++.+||+.||++|||++|++++|+.+....+.+
T Consensus 264 ~----------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~~~~ 311 (317)
T 2buj_A 264 L----------SIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPAPGQ 311 (317)
T ss_dssp ------------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCCCCC-
T ss_pred C----------CCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCCCCCC
Confidence 0 00011122345777888999999999999999999999988655543
No 154
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.4e-38 Score=331.62 Aligned_cols=256 Identities=14% Similarity=0.161 Sum_probs=199.2
Q ss_pred hccccccCceEEEEEEecC---------CCeEEEEEeecccCChHHHHHHHHHHHhhcCCCceec---------------
Q 006677 343 AEVLGKGSYGTAYKAVLEE---------STTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVP--------------- 398 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~~---------~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~--------------- 398 (635)
.+.||+|+||.||+|.... ++.||+|++... +.+.+|++++.++ +||||++
T Consensus 47 ~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~----~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~i~~ 121 (352)
T 2jii_A 47 KSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD----GRLFNEQNFFQRA-AKPLQVNKWKKLYSTPLLAIPT 121 (352)
T ss_dssp EEEEEEETTEEEEEEEECC-----------CEEEEEEETT----STHHHHHHHHHHH-CCHHHHHHHHHHTTCTTCSCCC
T ss_pred EEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc----chHHHHHHHHHHh-cccchhhhhhhhccCCccCccc
Confidence 4679999999999999764 788999998753 5688999999999 8999887
Q ss_pred eeEEEEe-CCeeEEEEEeccCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcC
Q 006677 399 LRAYYYS-KDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQ 477 (635)
Q Consensus 399 l~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~ 477 (635)
+++++.. ++..++||||+ +++|.+++.... ...+++..+..++.||+.||+|||+.+ |+||||||+||+++.
T Consensus 122 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~---~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dikp~NIl~~~ 194 (352)
T 2jii_A 122 CMGFGVHQDKYRFLVLPSL-GRSLQSALDVSP---KHVLSERSVLQVACRLLDALEFLHENE---YVHGNVTAENIFVDP 194 (352)
T ss_dssp CCEEEEETTTEEEEEEECC-CEEHHHHHHHSG---GGCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCCGGGEEEET
T ss_pred hhhccccCCcEEEEEecCC-CcCHHHHHHhCC---cCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCHHHEEEcC
Confidence 6778876 67889999999 999999997542 235999999999999999999999998 999999999999999
Q ss_pred CC--CeEEeecCCCCCCCCC-----------CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCC
Q 006677 478 DL--DGCISDFGLTPLMNVP-----------ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRD 544 (635)
Q Consensus 478 ~~--~~ki~DfGla~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~ 544 (635)
++ .+||+|||+++..... ....+++.|+|||++.+..++.++|||||||++|||++|+.||......
T Consensus 195 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~ 274 (352)
T 2jii_A 195 EDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPN 274 (352)
T ss_dssp TEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTC
T ss_pred CCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcC
Confidence 98 9999999999765422 2235788999999999999999999999999999999999999854321
Q ss_pred CCCChhHHHHHHhhhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhccCCC
Q 006677 545 DMVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSE 617 (635)
Q Consensus 545 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~~~~~~ 617 (635)
. ..+......... . .....+... ..... ...+.+++.+||+.||++|||++|+++.|+++.+....
T Consensus 275 ~-~~~~~~~~~~~~-~-~~~~~~~~~-~~~~~---~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~ 340 (352)
T 2jii_A 275 T-EDIMKQKQKFVD-K-PGPFVGPCG-HWIRP---SETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLRV 340 (352)
T ss_dssp H-HHHHHHHHHHHH-S-CCCEECTTS-CEECC---CHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred H-HHHHHHHHhccC-C-hhhhhhhcc-ccCCC---cHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcCC
Confidence 1 111111111111 1 111111000 00111 24567777899999999999999999999999877643
No 155
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=6.2e-39 Score=324.52 Aligned_cols=247 Identities=26% Similarity=0.414 Sum_probs=193.6
Q ss_pred hccccccCceEEEEEEecCCCeEEEEEeecccCChHHHHHHHHHHHhhcCCCceeceeEEEEeC-CeeEEEEEeccCCCh
Q 006677 343 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSK-DEKLLVYDYFASGSL 421 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~-~~~~lv~e~~~~g~L 421 (635)
.+.||+|+||+||+|... ++.||+|+++... ..+.+.+|++++.++ +||||+++++++... +..++||||+++|+|
T Consensus 26 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~-~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L 102 (278)
T 1byg_A 26 LQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA-TAQAFLAEASVMTQL-RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSL 102 (278)
T ss_dssp EEEEEECSSCEEEEEEET-TEEEEEEECCCCC---HHHHHTHHHHTTC-CCTTBCCEEEEECCC--CCEEEECCCTTEEH
T ss_pred EeEEecCCCceEEEEEEc-CCEEEEEEecchh-HHHHHHHHHHHHHhC-CCCCEeeEEEEEEcCCCceEEEEecCCCCCH
Confidence 578999999999999875 7899999987543 456789999999999 899999999997654 478999999999999
Q ss_pred hhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCCC-CCCC
Q 006677 422 STLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA-TPSR 500 (635)
Q Consensus 422 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~~-~~~~ 500 (635)
.+++.... ...+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||++....... ...+
T Consensus 103 ~~~l~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~ 176 (278)
T 1byg_A 103 VDYLRSRG---RSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL 176 (278)
T ss_dssp HHHHHHHH---HHHCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTSCEEECCCCC------------C
T ss_pred HHHHHhcc---cccCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCCcceEEEeCCCcEEEeeccccccccccccCCCc
Confidence 99996432 123789999999999999999999998 9999999999999999999999999987654432 3346
Q ss_pred CCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcccChHHH
Q 006677 501 SAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEE 579 (635)
Q Consensus 501 ~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 579 (635)
++.|+|||++.+..++.++||||||+++|||+| |..||......+ ...... ...... .....
T Consensus 177 ~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~------~~~~~~-~~~~~~----------~~~~~ 239 (278)
T 1byg_A 177 PVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD------VVPRVE-KGYKMD----------APDGC 239 (278)
T ss_dssp CTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGG------HHHHHT-TTCCCC----------CCTTC
T ss_pred cccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH------HHHHHh-cCCCCC----------CcccC
Confidence 778999999998899999999999999999998 999997543221 111111 111100 01122
Q ss_pred HHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhccC
Q 006677 580 MVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 615 (635)
Q Consensus 580 ~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~~~~ 615 (635)
...+.+++.+||+.||++|||+.|+++.|+++....
T Consensus 240 ~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~~ 275 (278)
T 1byg_A 240 PPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTHE 275 (278)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhhh
Confidence 345677888999999999999999999999998654
No 156
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=4.4e-38 Score=344.70 Aligned_cols=244 Identities=20% Similarity=0.297 Sum_probs=197.7
Q ss_pred ccccccCceEEEEEEec-CCCeEEEEEeeccc----CChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEeccC
Q 006677 344 EVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVV----VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS 418 (635)
Q Consensus 344 ~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~ 418 (635)
++||+|+||.||+|+.. +++.||+|++.... .....+.+|++++.++ +||||+++++++...+..|+||||+++
T Consensus 191 ~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l-~hp~Iv~l~~~~~~~~~l~lVmE~~~g 269 (543)
T 3c4z_A 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-HSRFIVSLAYAFETKTDLCLVMTIMNG 269 (543)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred EEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhc-CCCCEeeEEEEEeeCCEEEEEEEeccC
Confidence 56999999999999975 58899999997542 2346788899999999 999999999999999999999999999
Q ss_pred CChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCCC--
Q 006677 419 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA-- 496 (635)
Q Consensus 419 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~~-- 496 (635)
|+|.+++..... ....+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 270 g~L~~~l~~~~~-~~~~l~e~~~~~~~~qi~~aL~~LH~~g---IvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~~~ 345 (543)
T 3c4z_A 270 GDIRYHIYNVDE-DNPGFQEPRAIFYTAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK 345 (543)
T ss_dssp CBHHHHHHTSST-TSCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCTTCEECCTTCCC
T ss_pred CCHHHHHHHhhc-ccccccHHHHHHHHHHHHHHHHHHHHcC---CcccCCChHHEEEeCCCCEEEeecceeeeccCCCcc
Confidence 999999875432 2345999999999999999999999998 9999999999999999999999999997654332
Q ss_pred --CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhccc
Q 006677 497 --TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQ 574 (635)
Q Consensus 497 --~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 574 (635)
...||+.|+|||++.+..++.++|||||||++|||++|+.||....... ......+.+...... ...
T Consensus 346 ~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~--~~~~~~~~i~~~~~~---------~p~ 414 (543)
T 3c4z_A 346 TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV--ENKELKQRVLEQAVT---------YPD 414 (543)
T ss_dssp BCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCC--CHHHHHHHHHHCCCC---------CCT
T ss_pred cccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccch--hHHHHHHHHhhcccC---------CCc
Confidence 2468999999999999999999999999999999999999998653221 222222222221110 011
Q ss_pred ChHHHHHHHHHHHHHcccCCCCCCCCH-----HHHHH
Q 006677 575 NIEEEMVQMLQIGMACVAKVPDMRPNM-----DEVVR 606 (635)
Q Consensus 575 ~~~~~~~~l~~l~~~cl~~~P~~RPs~-----~evl~ 606 (635)
.....+.+++.+||+.||++||++ +|+++
T Consensus 415 ---~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~ 448 (543)
T 3c4z_A 415 ---KFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRT 448 (543)
T ss_dssp ---TSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHT
T ss_pred ---ccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHc
Confidence 122355677789999999999975 66665
No 157
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=1.2e-39 Score=338.65 Aligned_cols=254 Identities=24% Similarity=0.360 Sum_probs=201.9
Q ss_pred hccccccCceEEEEEEecC------CCeEEEEEeecccC--ChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEE
Q 006677 343 AEVLGKGSYGTAYKAVLEE------STTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYD 414 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~~------~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e 414 (635)
.+.||+|+||.||+|.... ...||+|++..... ..+.+.+|++++.++.+||||+++++++...+..++|||
T Consensus 51 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e 130 (333)
T 2i1m_A 51 GKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITE 130 (333)
T ss_dssp EEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCceEEEEe
Confidence 5789999999999999653 23699999876532 245688999999999789999999999999999999999
Q ss_pred eccCCChhhhccCCCC---------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEee
Q 006677 415 YFASGSLSTLLHGNRG---------AGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISD 485 (635)
Q Consensus 415 ~~~~g~L~~~l~~~~~---------~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~D 485 (635)
|+++|+|.+++..... .....+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|
T Consensus 131 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~D 207 (333)
T 2i1m_A 131 YCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVLLTNGHVAKIGD 207 (333)
T ss_dssp CCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGCEEEGGGEEEBCC
T ss_pred cCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCC---cccCCcccceEEECCCCeEEECc
Confidence 9999999999864321 01234899999999999999999999998 99999999999999999999999
Q ss_pred cCCCCCCCCCC------CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhh
Q 006677 486 FGLTPLMNVPA------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVR 558 (635)
Q Consensus 486 fGla~~~~~~~------~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~ 558 (635)
||++....... ...+++.|+|||++.+..++.++||||||+++|||+| |..||......+ .......
T Consensus 208 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~------~~~~~~~ 281 (333)
T 2i1m_A 208 FGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS------KFYKLVK 281 (333)
T ss_dssp CGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSH------HHHHHHH
T ss_pred cccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhH------HHHHHHh
Confidence 99997653322 2234667999999998899999999999999999999 999997543221 1122222
Q ss_pred hccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhccC
Q 006677 559 EEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 615 (635)
Q Consensus 559 ~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~~~~ 615 (635)
...... ........+.+++.+||+.||.+|||+.|++++|+++....
T Consensus 282 ~~~~~~----------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~ 328 (333)
T 2i1m_A 282 DGYQMA----------QPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQED 328 (333)
T ss_dssp HTCCCC----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred cCCCCC----------CCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHhh
Confidence 221110 00111245677888999999999999999999999987653
No 158
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=2.6e-38 Score=322.15 Aligned_cols=245 Identities=23% Similarity=0.339 Sum_probs=195.6
Q ss_pred ccccccCceEEEEEEec---CCCeEEEEEeecccCC---hHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEecc
Q 006677 344 EVLGKGSYGTAYKAVLE---ESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 417 (635)
Q Consensus 344 ~~lG~G~fg~Vy~~~~~---~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 417 (635)
+.||+|+||+||+|.+. .++.||||+++..... .+.+.+|++++.++ +||||+++++++ ..+..++||||++
T Consensus 23 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~-~~~~~~lv~e~~~ 100 (291)
T 1xbb_A 23 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQL-DNPYIVRMIGIC-EAESWMLVMEMAE 100 (291)
T ss_dssp EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTC-CCTTBCCEEEEE-ESSSEEEEEECCT
T ss_pred CccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhC-CCCCEEEEEEEE-CCCCcEEEEEeCC
Confidence 37999999999999643 3578999999765332 46788999999999 899999999999 5677899999999
Q ss_pred CCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCCCC
Q 006677 418 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPAT 497 (635)
Q Consensus 418 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~~~ 497 (635)
+++|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++........
T Consensus 101 ~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 172 (291)
T 1xbb_A 101 LGPLNKYLQQN-----RHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 172 (291)
T ss_dssp TEEHHHHHHHC-----TTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCCTTCEECCTTCS
T ss_pred CCCHHHHHHhC-----cCCCHHHHHHHHHHHHHHHHHHHhCC---eEcCCCCcceEEEeCCCcEEEccCCcceeeccCCC
Confidence 99999999753 24899999999999999999999998 99999999999999999999999999976543321
Q ss_pred -------CCCCCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccchhh
Q 006677 498 -------PSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVE 569 (635)
Q Consensus 498 -------~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 569 (635)
..+++.|+|||.+.+..++.++||||||+++|||++ |+.||......+ .. ..+.......
T Consensus 173 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~------~~-~~~~~~~~~~----- 240 (291)
T 1xbb_A 173 YYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE------VT-AMLEKGERMG----- 240 (291)
T ss_dssp EEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH------HH-HHHHTTCCCC-----
T ss_pred cccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHH------HH-HHHHcCCCCC-----
Confidence 234577999999998889999999999999999999 999997543211 11 1111111100
Q ss_pred hhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhccC
Q 006677 570 LMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 615 (635)
Q Consensus 570 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~~~~ 615 (635)
........+.+++.+||+.||++||++.|+++.|+++....
T Consensus 241 -----~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~ 281 (291)
T 1xbb_A 241 -----CPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDV 281 (291)
T ss_dssp -----CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred -----CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHH
Confidence 01122345777888999999999999999999999987543
No 159
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=2.3e-38 Score=336.95 Aligned_cols=258 Identities=17% Similarity=0.255 Sum_probs=197.9
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccCChHHHHHHHHHHHhhc-------CCCceeceeEEEE----eCCeeE
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVGKRDFEQQMEIVGRVG-------QHPNVVPLRAYYY----SKDEKL 410 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~-------~h~niv~l~~~~~----~~~~~~ 410 (635)
.++||+|+||+||+|... +++.||+|+++......+.+.+|++++.++. .|+||+++++++. .....+
T Consensus 42 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~~ 121 (397)
T 1wak_A 42 IRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHIC 121 (397)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETTEEEEE
T ss_pred EEEeeecCCeeEEEEEecCCCeEEEEEEEecCCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCCCCceEE
Confidence 568999999999999864 5778999999765444567889999999884 2888999999987 455789
Q ss_pred EEEEeccCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCCceecCCCCCCeEEcCCC----------
Q 006677 411 LVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSM-GGPKFTHGNIKASNVLINQDL---------- 479 (635)
Q Consensus 411 lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-~~~~ivH~Dlk~~NIll~~~~---------- 479 (635)
+||||+ +++|.+++.... ...+++..+..++.||+.||+|||++ + |+||||||+|||++.++
T Consensus 122 lv~e~~-~~~l~~~~~~~~---~~~~~~~~~~~i~~qi~~aL~~lH~~~g---ivHrDikp~NIll~~~~~~~~~~~~~~ 194 (397)
T 1wak_A 122 MVFEVL-GHHLLKWIIKSN---YQGLPLPCVKKIIQQVLQGLDYLHTKCR---IIHTDIKPENILLSVNEQYIRRLAAEA 194 (397)
T ss_dssp EEECCC-CCBHHHHHHHTT---TSCCCHHHHHHHHHHHHHHHHHHHHTTC---EECCCCSGGGEEECCCHHHHHHHHHHH
T ss_pred EEEecc-CccHHHHHHhcc---cCCCCHHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHeeEeccchhhhhhhhhh
Confidence 999999 556666654332 23489999999999999999999998 7 99999999999999775
Q ss_pred ---------------------------------------CeEEeecCCCCCCCCC-CCCCCCCcccCcccccCCCCCCcc
Q 006677 480 ---------------------------------------DGCISDFGLTPLMNVP-ATPSRSAGYRAPEVIETRKHSHKS 519 (635)
Q Consensus 480 ---------------------------------------~~ki~DfGla~~~~~~-~~~~~~~~y~aPE~~~~~~~~~k~ 519 (635)
.+||+|||++...... ....+|+.|+|||++.+..++.++
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~ 274 (397)
T 1wak_A 195 TEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPA 274 (397)
T ss_dssp C---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSCSCCSCGGGCCHHHHHTSCCCTHH
T ss_pred HHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccCccCCCCCcccCChhhcCCCCCcHH
Confidence 8999999999766443 334678999999999999999999
Q ss_pred chhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhh---h---------ccccccch------------------hh
Q 006677 520 DVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVR---E---------EWTAEVFD------------------VE 569 (635)
Q Consensus 520 Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~---~---------~~~~~~~d------------------~~ 569 (635)
|||||||++|||+||+.||......+..........+.. . .+....+. ..
T Consensus 275 DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (397)
T 1wak_A 275 DIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVL 354 (397)
T ss_dssp HHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHHHH
T ss_pred HHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcchhHhh
Confidence 999999999999999999987655443322111111110 0 00000000 00
Q ss_pred hhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006677 570 LMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 570 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 607 (635)
.............+.+++.+||+.||++|||++|++++
T Consensus 355 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 392 (397)
T 1wak_A 355 VEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRH 392 (397)
T ss_dssp HHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTS
T ss_pred hhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhC
Confidence 01112235666788999999999999999999999864
No 160
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=5.3e-38 Score=317.02 Aligned_cols=241 Identities=22% Similarity=0.361 Sum_probs=194.2
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccC--ChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEeccCC
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASG 419 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g 419 (635)
.+.||+|+||.||+|... +++.||+|++..... ..+.+.+|+.++.++ +||||+++++++...+..++||||++++
T Consensus 12 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 90 (276)
T 2yex_A 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML-NHENVVKFYGHRREGNIQYLFLEYCSGG 90 (276)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTC-CCTTBCCEEEEEEETTEEEEEEECCTTE
T ss_pred EEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhc-CCCCceeeeeEEEcCCEEEEEEEecCCC
Confidence 568999999999999976 588999999875533 246788999999999 9999999999999999999999999999
Q ss_pred ChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCC-----
Q 006677 420 SLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV----- 494 (635)
Q Consensus 420 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~----- 494 (635)
+|.+++... ..+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||++.....
T Consensus 91 ~L~~~l~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~ 162 (276)
T 2yex_A 91 ELFDRIEPD-----IGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 162 (276)
T ss_dssp EGGGGSBTT-----TBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEECEETTEEC
T ss_pred cHHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCChHHEEEccCCCEEEeeCCCccccCCCcchh
Confidence 999999642 34899999999999999999999998 99999999999999999999999999875432
Q ss_pred -CCCCCCCCcccCcccccCCCC-CCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhc
Q 006677 495 -PATPSRSAGYRAPEVIETRKH-SHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMR 572 (635)
Q Consensus 495 -~~~~~~~~~y~aPE~~~~~~~-~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 572 (635)
.....+++.|+|||.+.+..+ +.++||||||+++|||++|+.||........ ....|. ..... .
T Consensus 163 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~~~~----~~~~~---~------ 228 (276)
T 2yex_A 163 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ-EYSDWK----EKKTY---L------ 228 (276)
T ss_dssp CBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSH-HHHHHH----TTCTT---S------
T ss_pred cccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHH-HHHHhh----hcccc---c------
Confidence 223457889999999987765 7789999999999999999999976543211 111111 11000 0
Q ss_pred ccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006677 573 FQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 573 ~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 607 (635)
.........+.+++.+|++.||++|||++|++++
T Consensus 229 -~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (276)
T 2yex_A 229 -NPWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (276)
T ss_dssp -TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred -CchhhcCHHHHHHHHHHCCCCchhCCCHHHHhcC
Confidence 0001122356678889999999999999999763
No 161
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=9.6e-38 Score=316.44 Aligned_cols=250 Identities=20% Similarity=0.373 Sum_probs=200.3
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccC-------ChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEE
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV-------GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYD 414 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-------~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e 414 (635)
.+.||+|+||.||+|... +++.||+|+++.... ..+.+.+|++++.++ +||||+++++++...+..++|||
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e 88 (283)
T 3bhy_A 10 GEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREI-RHPNIITLHDIFENKTDVVLILE 88 (283)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEEE
T ss_pred HHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhC-CCCCeeehhheecCCCeEEEEEe
Confidence 568999999999999976 588999999876532 356789999999999 89999999999999999999999
Q ss_pred eccCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCC----CeEEeecCCCC
Q 006677 415 YFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDL----DGCISDFGLTP 490 (635)
Q Consensus 415 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~----~~ki~DfGla~ 490 (635)
|+++++|.+++... ..+++..+..++.|++.||+|||+.+ ++||||||+||+++.++ .+||+|||++.
T Consensus 89 ~~~~~~L~~~l~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~ 160 (283)
T 3bhy_A 89 LVSGGELFDFLAEK-----ESLTEDEATQFLKQILDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH 160 (283)
T ss_dssp CCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred ecCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCChHHEEEecCCCCCCceEEEecccce
Confidence 99999999999642 34899999999999999999999998 99999999999998877 89999999997
Q ss_pred CCCCCC---CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccch
Q 006677 491 LMNVPA---TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFD 567 (635)
Q Consensus 491 ~~~~~~---~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 567 (635)
...... ...+++.|+|||++.+..++.++||||||+++|||++|..||...... .....+...... ..
T Consensus 161 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------~~~~~~~~~~~~---~~ 231 (283)
T 3bhy_A 161 KIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQ------ETLTNISAVNYD---FD 231 (283)
T ss_dssp ECC--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHH------HHHHHHHTTCCC---CC
T ss_pred eccCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchH------HHHHHhHhcccC---Cc
Confidence 654332 335788999999999999999999999999999999999999754321 111111111100 00
Q ss_pred hhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHHHhhccC
Q 006677 568 VELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVR--MIEEVRQSD 615 (635)
Q Consensus 568 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~--~L~~~~~~~ 615 (635)
... . ......+.+++.+||+.||++|||+.|+++ .++.+....
T Consensus 232 ~~~--~---~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~~~ 276 (283)
T 3bhy_A 232 EEY--F---SNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRRRN 276 (283)
T ss_dssp HHH--H---TTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHHHCC
T ss_pred chh--c---ccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHHHHh
Confidence 000 0 111235677888999999999999999998 577776554
No 162
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=6.4e-38 Score=317.94 Aligned_cols=242 Identities=21% Similarity=0.329 Sum_probs=195.5
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccCC---hHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEeccC
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS 418 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~ 418 (635)
.+.||+|+||.||+|... +++.||+|++...... .+.+.+|++++.++ +||||+++++++...+..++||||+++
T Consensus 11 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~e~~~~ 89 (284)
T 3kk8_A 11 KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL-QHPNIVRLHDSIQEESFHYLVFDLVTG 89 (284)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred hhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHc-CCCCcCeEEEEEEcCCEEEEEEecCCC
Confidence 467999999999999975 4789999999766543 34677899999999 899999999999999999999999999
Q ss_pred CChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCC---eEEeecCCCCCCCCC
Q 006677 419 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLD---GCISDFGLTPLMNVP 495 (635)
Q Consensus 419 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~---~ki~DfGla~~~~~~ 495 (635)
|+|.+.+... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++. +||+|||++......
T Consensus 90 ~~l~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~ 161 (284)
T 3kk8_A 90 GELFEDIVAR-----EFYSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS 161 (284)
T ss_dssp CBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSS
T ss_pred CCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---cCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccC
Confidence 9999888643 34899999999999999999999998 999999999999987665 999999999766543
Q ss_pred C---CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhc
Q 006677 496 A---TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMR 572 (635)
Q Consensus 496 ~---~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 572 (635)
. ...+++.|+|||++.+..++.++||||||+++|||++|+.||..... ............... . ..
T Consensus 162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~------~~~~~~~~~~~~~~~--~---~~ 230 (284)
T 3kk8_A 162 EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ------HRLYAQIKAGAYDYP--S---PE 230 (284)
T ss_dssp CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHTCCCCC--T---TT
T ss_pred ccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCch------hHHHHHHHhccccCC--c---hh
Confidence 3 34578899999999999999999999999999999999999975432 111222221111100 0 00
Q ss_pred ccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006677 573 FQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 573 ~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 607 (635)
.. .....+.+++.+|++.||++|||++|++++
T Consensus 231 ~~---~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (284)
T 3kk8_A 231 WD---TVTPEAKSLIDSMLTVNPKKRITADQALKV 262 (284)
T ss_dssp TT---TSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred hc---ccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 11 122356678889999999999999999984
No 163
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=7.6e-38 Score=316.26 Aligned_cols=240 Identities=21% Similarity=0.325 Sum_probs=194.7
Q ss_pred hccccccCceEEEEEEecC-CCeEEEEEeeccc-CChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEeccCCC
Q 006677 343 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVV-VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGS 420 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~-~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 420 (635)
.+.||+|+||+||+|.... +..||+|++.... ...+.+.+|++++.++ +||||+++++++...+..++||||+++++
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 92 (277)
T 3f3z_A 14 ENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSL-DHPNIIRLYETFEDNTDIYLVMELCTGGE 92 (277)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEEEECCCSCB
T ss_pred eeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhC-CCCCEeeEEEEEecCCeEEEEEeccCCCc
Confidence 5789999999999999764 5689999987653 3467899999999999 99999999999999999999999999999
Q ss_pred hhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEE---cCCCCeEEeecCCCCCCCCC--
Q 006677 421 LSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLI---NQDLDGCISDFGLTPLMNVP-- 495 (635)
Q Consensus 421 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll---~~~~~~ki~DfGla~~~~~~-- 495 (635)
|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||++ +.++.+||+|||++......
T Consensus 93 L~~~~~~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~~ 164 (277)
T 3f3z_A 93 LFERVVHK-----RVFRESDAARIMKDVLSAVAYCHKLN---VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM 164 (277)
T ss_dssp HHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTSC
T ss_pred HHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHEEEecCCCCCcEEEEecccceeccCccc
Confidence 99988643 24899999999999999999999998 9999999999999 78899999999999765433
Q ss_pred -CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhccc
Q 006677 496 -ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQ 574 (635)
Q Consensus 496 -~~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 574 (635)
....+++.|+|||++.+. ++.++||||||+++|||++|+.||...... .....+....... .... ..
T Consensus 165 ~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~------~~~~~~~~~~~~~--~~~~---~~ 232 (277)
T 3f3z_A 165 MRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDS------EVMLKIREGTFTF--PEKD---WL 232 (277)
T ss_dssp BCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHCCCCC--CHHH---HT
T ss_pred hhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHH------HHHHHHHhCCCCC--Cchh---hh
Confidence 234578899999998764 899999999999999999999999754321 1111211111100 0000 00
Q ss_pred ChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006677 575 NIEEEMVQMLQIGMACVAKVPDMRPNMDEVVR 606 (635)
Q Consensus 575 ~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 606 (635)
.....+.+++.+|++.||++|||+.|+++
T Consensus 233 ---~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 233 ---NVSPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp ---TSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred ---cCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 12345677888999999999999999997
No 164
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=2e-38 Score=329.72 Aligned_cols=232 Identities=22% Similarity=0.314 Sum_probs=192.5
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccC---------ChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEE
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV---------GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLV 412 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~---------~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv 412 (635)
.+.||+|+||+||+|... +++.||||++..... ....+.+|++++.++ +||||+++++++.+.+..++|
T Consensus 29 ~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~Iv~~~~~~~~~~~~~lv 107 (335)
T 3dls_A 29 MSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRV-EHANIIKVLDIFENQGFFQLV 107 (335)
T ss_dssp EEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTC-CCTTBCCEEEEEECSSEEEEE
T ss_pred EeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhC-CCCCEeeEEEEEeeCCEEEEE
Confidence 578999999999999964 578899999976532 234577899999999 999999999999999999999
Q ss_pred EEeccCC-ChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCC
Q 006677 413 YDYFASG-SLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPL 491 (635)
Q Consensus 413 ~e~~~~g-~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~ 491 (635)
|||+.+| +|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||++..
T Consensus 108 ~e~~~~g~~l~~~~~~~-----~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~ 179 (335)
T 3dls_A 108 MEKHGSGLDLFAFIDRH-----PRLDEPLASYIFRQLVSAVGYLRLKD---IIHRDIKDENIVIAEDFTIKLIDFGSAAY 179 (335)
T ss_dssp EECCTTSCBHHHHHHTC-----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EEeCCCCccHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---eEEeccCHHHEEEcCCCcEEEeecccceE
Confidence 9999777 999999743 24899999999999999999999998 99999999999999999999999999987
Q ss_pred CCCCC---CCCCCCcccCcccccCCCC-CCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccch
Q 006677 492 MNVPA---TPSRSAGYRAPEVIETRKH-SHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFD 567 (635)
Q Consensus 492 ~~~~~---~~~~~~~y~aPE~~~~~~~-~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 567 (635)
..... ...+|+.|+|||++.+..+ +.++|||||||++|||++|+.||....... .
T Consensus 180 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~---------------------~ 238 (335)
T 3dls_A 180 LERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETV---------------------E 238 (335)
T ss_dssp CCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGGT---------------------T
T ss_pred CCCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHHH---------------------h
Confidence 65433 2347899999999988876 789999999999999999999997422100 0
Q ss_pred hhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006677 568 VELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 568 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 607 (635)
........ ....+.+++.+||+.||++|||++|++++
T Consensus 239 ~~~~~~~~---~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 239 AAIHPPYL---VSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp TCCCCSSC---CCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred hccCCCcc---cCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00000111 12346778889999999999999999985
No 165
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.7e-38 Score=330.12 Aligned_cols=251 Identities=20% Similarity=0.262 Sum_probs=193.0
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeeccc------CChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEe
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVV------VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDY 415 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~------~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~ 415 (635)
.+.||+|+||+||+|... ++..||+|++.... ...+.+.+|++++.++ +||||+++++++.+.+..++||||
T Consensus 31 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lv~e~ 109 (345)
T 3hko_A 31 KGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKL-HHPNIARLYEVYEDEQYICLVMEL 109 (345)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEEEC
T ss_pred cceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhC-CCCCcceeehhhccCCeEEEEEeC
Confidence 578999999999999975 57789999987542 2246788999999999 899999999999999999999999
Q ss_pred ccCCChhhhccCCCCC-----------------------------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCC
Q 006677 416 FASGSLSTLLHGNRGA-----------------------------------GRTPLDWETRVKILLGTARGVAHIHSMGG 460 (635)
Q Consensus 416 ~~~g~L~~~l~~~~~~-----------------------------------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ 460 (635)
+++|+|.+++...... ....+++..+..++.||+.||+|||+.+
T Consensus 110 ~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~- 188 (345)
T 3hko_A 110 CHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQG- 188 (345)
T ss_dssp CCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHHHTT-
T ss_pred CCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCC-
Confidence 9999999998521100 0112467788899999999999999998
Q ss_pred CCceecCCCCCCeEEcCCC--CeEEeecCCCCCCCC--------CCCCCCCCcccCcccccC--CCCCCccchhhHHHHH
Q 006677 461 PKFTHGNIKASNVLINQDL--DGCISDFGLTPLMNV--------PATPSRSAGYRAPEVIET--RKHSHKSDVYSFGVLL 528 (635)
Q Consensus 461 ~~ivH~Dlk~~NIll~~~~--~~ki~DfGla~~~~~--------~~~~~~~~~y~aPE~~~~--~~~~~k~Dvws~Gvvl 528 (635)
|+||||||+||+++.++ .+||+|||++..... .....+++.|+|||++.+ ..++.++|||||||++
T Consensus 189 --ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il 266 (345)
T 3hko_A 189 --ICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLL 266 (345)
T ss_dssp --EECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHHH
T ss_pred --ccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHHHHHH
Confidence 99999999999998776 899999999975422 123457889999999975 6789999999999999
Q ss_pred HHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--
Q 006677 529 LEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVR-- 606 (635)
Q Consensus 529 ~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~-- 606 (635)
|||++|+.||...... .............. . +........+.+++.+||+.+|++||++.|+++
T Consensus 267 ~el~~g~~pf~~~~~~------~~~~~~~~~~~~~~--~------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~hp 332 (345)
T 3hko_A 267 HLLLMGAVPFPGVNDA------DTISQVLNKKLCFE--N------PNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHP 332 (345)
T ss_dssp HHHHHSSCSSCCSSHH------HHHHHHHHCCCCTT--S------GGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHHSH
T ss_pred HHHHHCCCCCCCCChH------HHHHHHHhcccccC--C------cccccCCHHHHHHHHHHcCCChhHCCCHHHHhcCh
Confidence 9999999999754321 11222222111100 0 001112345677888999999999999999998
Q ss_pred HHHHh
Q 006677 607 MIEEV 611 (635)
Q Consensus 607 ~L~~~ 611 (635)
.++++
T Consensus 333 ~~~~~ 337 (345)
T 3hko_A 333 WISQF 337 (345)
T ss_dssp HHHTT
T ss_pred hhccC
Confidence 44443
No 166
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=1.3e-38 Score=344.43 Aligned_cols=237 Identities=20% Similarity=0.266 Sum_probs=187.6
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeeccc----CChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEecc
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVV----VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 417 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 417 (635)
.++||+|+||.||+|... +++.||+|+++... .....+.+|+.+++++ +||||+++++++...+..++||||++
T Consensus 153 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~~~~~~~~lv~e~~~ 231 (446)
T 4ejn_A 153 LKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS-RHPFLTALKYSFQTHDRLCFVMEYAN 231 (446)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCC-SCTTSCCEEEEEEETTEEEEEECCCS
T ss_pred eEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhC-CCCeEeeEEEEEeeCCEEEEEEeeCC
Confidence 578999999999999965 57899999997542 1234567788888888 89999999999999999999999999
Q ss_pred CCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCC-
Q 006677 418 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHS-MGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP- 495 (635)
Q Consensus 418 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~-~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~- 495 (635)
+|+|.+++... ..+++..+..++.||+.||+|||+ .+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 232 ~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~~g---iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 303 (446)
T 4ejn_A 232 GGELFFHLSRE-----RVFSEDRARFYGAEIVSALDYLHSEKN---VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG 303 (446)
T ss_dssp SCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHHTC---CCCCCCCGGGEEECSSSCEEECCCCCCCTTCC--
T ss_pred CCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHhhcCC---EEECCCCHHHEEECCCCCEEEccCCCceeccCCC
Confidence 99999999643 248999999999999999999998 77 999999999999999999999999999764322
Q ss_pred ---CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhc
Q 006677 496 ---ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMR 572 (635)
Q Consensus 496 ---~~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 572 (635)
....||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+...... .
T Consensus 304 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~------~~~~~~i~~~~~~---------~ 368 (446)
T 4ejn_A 304 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH------EKLFELILMEEIR---------F 368 (446)
T ss_dssp ---CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHCCCC---------C
T ss_pred cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH------HHHHHHHHhCCCC---------C
Confidence 234588999999999999999999999999999999999999975432 1222222221110 0
Q ss_pred ccChHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 006677 573 FQNIEEEMVQMLQIGMACVAKVPDMRP-----NMDEVVR 606 (635)
Q Consensus 573 ~~~~~~~~~~l~~l~~~cl~~~P~~RP-----s~~evl~ 606 (635)
. ......+.+++.+||+.||++|| +++|+++
T Consensus 369 p---~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 369 P---RTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp C---TTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred C---ccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 0 11223566788899999999999 9999987
No 167
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=1.1e-38 Score=342.94 Aligned_cols=193 Identities=23% Similarity=0.319 Sum_probs=168.6
Q ss_pred hccccccCceEEEEEEecC-CCeEEEEEeecccCChHHHHHHHHHHHhhc-----CCCceeceeEEEEeCCeeEEEEEec
Q 006677 343 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVVVGKRDFEQQMEIVGRVG-----QHPNVVPLRAYYYSKDEKLLVYDYF 416 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~~~~~~~~~e~~~l~~l~-----~h~niv~l~~~~~~~~~~~lv~e~~ 416 (635)
.++||+|+||+||+|.... ++.||||++.........+.+|++++..+. +|+||+++++++...+..++||||+
T Consensus 102 ~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~ 181 (429)
T 3kvw_A 102 LKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELL 181 (429)
T ss_dssp EEEEEESSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEEEEECCC
T ss_pred EEEcccCccEEEEEEEECCCCcEEEEEEECCccchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEEEEEecc
Confidence 4689999999999998654 788999999765444567788888888774 5779999999999999999999999
Q ss_pred cCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCC--eEEeecCCCCCCCC
Q 006677 417 ASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLD--GCISDFGLTPLMNV 494 (635)
Q Consensus 417 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~--~ki~DfGla~~~~~ 494 (635)
. ++|.+++.... ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++. +||+|||++.....
T Consensus 182 ~-~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~~ 254 (429)
T 3kvw_A 182 S-MNLYELIKKNK---FQGFSLPLVRKFAHSILQCLDALHKNR---IIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQ 254 (429)
T ss_dssp C-CBHHHHHHHTT---TCCCCHHHHHHHHHHHHHHHHHHHHHT---EECSCCSGGGEEESSTTSCCEEECCCTTCEETTC
T ss_pred C-CCHHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEEccCCCcceEEeecccceecCC
Confidence 6 59999987543 234899999999999999999999998 999999999999999987 99999999976544
Q ss_pred C-CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCC
Q 006677 495 P-ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPT 542 (635)
Q Consensus 495 ~-~~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~ 542 (635)
. ....+|+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 255 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~ 303 (429)
T 3kvw_A 255 RVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGED 303 (429)
T ss_dssp CCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred cccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCC
Confidence 3 34568899999999999999999999999999999999999998654
No 168
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.6e-38 Score=333.27 Aligned_cols=244 Identities=21% Similarity=0.341 Sum_probs=195.0
Q ss_pred hccccccCceEEEEEEe----cCCCeEEEEEeeccc-----CChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEE
Q 006677 343 AEVLGKGSYGTAYKAVL----EESTTVVVKRLKEVV-----VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVY 413 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~----~~~~~vavK~l~~~~-----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~ 413 (635)
.+.||+|+||+||+|+. .+++.||||+++... ...+.+.+|++++.++.+||||+++++++...+..++||
T Consensus 59 ~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 138 (355)
T 1vzo_A 59 LKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLIL 138 (355)
T ss_dssp EEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEEEEE
T ss_pred EEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCceEEEEe
Confidence 57899999999999997 368899999987532 234667789999999977999999999999999999999
Q ss_pred EeccCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCC
Q 006677 414 DYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN 493 (635)
Q Consensus 414 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~ 493 (635)
||+++|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 139 e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 210 (355)
T 1vzo_A 139 DYINGGELFTHLSQR-----ERFTEHEVQIYVGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSKEFV 210 (355)
T ss_dssp CCCCSCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEESCSSEEEECC
T ss_pred ecCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCcEEEeeCCCCeecc
Confidence 999999999999743 24899999999999999999999998 9999999999999999999999999987653
Q ss_pred CC-----CCCCCCCcccCcccccC--CCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccc
Q 006677 494 VP-----ATPSRSAGYRAPEVIET--RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVF 566 (635)
Q Consensus 494 ~~-----~~~~~~~~y~aPE~~~~--~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 566 (635)
.. ....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||....... ..............
T Consensus 211 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~--~~~~~~~~~~~~~~----- 283 (355)
T 1vzo_A 211 ADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKN--SQAEISRRILKSEP----- 283 (355)
T ss_dssp GGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCC--CHHHHHHHHHHCCC-----
T ss_pred cCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccc--hHHHHHHHHhccCC-----
Confidence 22 12357899999999985 347899999999999999999999997544322 22222222221110
Q ss_pred hhhhhcccChHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHHH
Q 006677 567 DVELMRFQNIEEEMVQMLQIGMACVAKVPDMRP-----NMDEVVRMI 608 (635)
Q Consensus 567 d~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RP-----s~~evl~~L 608 (635)
.........+.+++.+||+.||++|| +++|++++.
T Consensus 284 -------~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~ 323 (355)
T 1vzo_A 284 -------PYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL 323 (355)
T ss_dssp -------CCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred -------CCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence 00111223566788899999999999 999998854
No 169
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=3.6e-38 Score=319.99 Aligned_cols=241 Identities=21% Similarity=0.347 Sum_probs=194.2
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccC---ChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEeccC
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV---GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS 418 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~ 418 (635)
.+.||+|+||+||+|... +++.||+|++..... ....+.+|+..+.++.+||||+++++++.+++..++||||+++
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 95 (289)
T 1x8b_A 16 LEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNG 95 (289)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred hhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEEecCC
Confidence 578999999999999976 688999999986532 2456778888888887899999999999999999999999999
Q ss_pred CChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcC-------------------CC
Q 006677 419 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQ-------------------DL 479 (635)
Q Consensus 419 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~-------------------~~ 479 (635)
|+|.+++..... ....+++..+..++.||+.||+|||+.+ |+||||||+||+++. ..
T Consensus 96 ~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~ 171 (289)
T 1x8b_A 96 GSLADAISENYR-IMSYFKEAELKDLLLQVGRGLRYIHSMS---LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKV 171 (289)
T ss_dssp CBHHHHHHHHHH-HTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEC--------------------CC
T ss_pred CcHHHHHHhhcc-cccCCCHHHHHHHHHHHHHHHHHHHhCC---EeecCCCHHHEEEcCCCCCcccccccccccccCCce
Confidence 999999975321 1134899999999999999999999998 999999999999984 44
Q ss_pred CeEEeecCCCCCCCCCCCCCCCCcccCcccccCC-CCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhh
Q 006677 480 DGCISDFGLTPLMNVPATPSRSAGYRAPEVIETR-KHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVR 558 (635)
Q Consensus 480 ~~ki~DfGla~~~~~~~~~~~~~~y~aPE~~~~~-~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 558 (635)
.+||+|||.+..........+++.|+|||++.+. .++.++|||||||++|||++|..|+.... .+ ..+.
T Consensus 172 ~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~--------~~-~~~~- 241 (289)
T 1x8b_A 172 MFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD--------QW-HEIR- 241 (289)
T ss_dssp CEEECCCTTCEETTCSCCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH--------HH-HHHH-
T ss_pred EEEEcccccccccCCccccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh--------HH-HHHH-
Confidence 7999999999888777777789999999999776 56689999999999999999998764321 11 1111
Q ss_pred hccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006677 559 EEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 559 ~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 607 (635)
....... .. .....+.+++.+||+.||++|||+.|++++
T Consensus 242 ~~~~~~~-------~~---~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 280 (289)
T 1x8b_A 242 QGRLPRI-------PQ---VLSQEFTELLKVMIHPDPERRPSAMALVKH 280 (289)
T ss_dssp TTCCCCC-------SS---CCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred cCCCCCC-------Cc---ccCHHHHHHHHHHhCCCcccCCCHHHHhhC
Confidence 1111000 01 122356778889999999999999999874
No 170
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=2.3e-39 Score=341.80 Aligned_cols=247 Identities=13% Similarity=0.032 Sum_probs=177.5
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccC----ChHHHHHHHHHHHhhc-CCCceecee-------EEEEeC---
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV----GKRDFEQQMEIVGRVG-QHPNVVPLR-------AYYYSK--- 406 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~----~~~~~~~e~~~l~~l~-~h~niv~l~-------~~~~~~--- 406 (635)
.+.||+|+||+||+|... +++.||+|++..... ..+.+.+|++++..+. +||||++++ +++...
T Consensus 67 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~~~~~~ 146 (371)
T 3q60_A 67 VEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAVQSQP 146 (371)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEEETTSC
T ss_pred eeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehheecCCCC
Confidence 468999999999999965 678899999987543 2345677877677664 499987754 455433
Q ss_pred --------------CeeEEEEEeccCCChhhhccCCCCCCCCCCCHHHH------HHHHHHHHHHHHHHHhcCCCCceec
Q 006677 407 --------------DEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETR------VKILLGTARGVAHIHSMGGPKFTHG 466 (635)
Q Consensus 407 --------------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~------~~i~~~ia~~l~~LH~~~~~~ivH~ 466 (635)
...++||||++ |+|.+++..... .+.+..+ ..++.||+.||+|||+++ |+||
T Consensus 147 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~----~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~---ivHr 218 (371)
T 3q60_A 147 PFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDF----VYVFRGDEGILALHILTAQLIRLAANLQSKG---LVHG 218 (371)
T ss_dssp SSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHH----SCCCCHHHHHHHHHHHHHHHHHHHHHHHHTT---EEET
T ss_pred CeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhcc----ccchhhhhhhhhHHHHHHHHHHHHHHHHHCC---CccC
Confidence 23799999999 899999975321 2444555 778899999999999998 9999
Q ss_pred CCCCCCeEEcCCCCeEEeecCCCCCCCCCC-CCCCCCcccCcccccC--CCCCCccchhhHHHHHHHHHhCCCCCCCCCC
Q 006677 467 NIKASNVLINQDLDGCISDFGLTPLMNVPA-TPSRSAGYRAPEVIET--RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTR 543 (635)
Q Consensus 467 Dlk~~NIll~~~~~~ki~DfGla~~~~~~~-~~~~~~~y~aPE~~~~--~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~ 543 (635)
||||+|||++.++.+||+|||+++...... ...+|+.|+|||++.+ ..++.++|||||||++|||++|+.||.....
T Consensus 219 Dikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~ 298 (371)
T 3q60_A 219 HFTPDNLFIMPDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTP 298 (371)
T ss_dssp TCSGGGEEECTTSCEEECCGGGEEETTCEEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCT
T ss_pred cCCHHHEEECCCCCEEEEecceeeecCCCccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCc
Confidence 999999999999999999999998765544 4456789999999987 6799999999999999999999999987643
Q ss_pred CCCCChhHHHHHHhhhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006677 544 DDMVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVR 606 (635)
Q Consensus 544 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 606 (635)
....... ............ ..+........+.+++.+||+.||++|||+.|+++
T Consensus 299 ~~~~~~~--------~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 299 GIKGSWK--------RPSLRVPGTDSL-AFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp TCTTCCC--------BCCTTSCCCCSC-CCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred ccccchh--------hhhhhhcccccc-chhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 3211100 000000000000 01111122345677788999999999999999986
No 171
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=1.3e-38 Score=335.21 Aligned_cols=235 Identities=21% Similarity=0.278 Sum_probs=182.9
Q ss_pred hccccccCceEEEEEEecC-CCeEEEEEeecccCC----hHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEecc
Q 006677 343 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVVVG----KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 417 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~~~----~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 417 (635)
.+.||+|+||.||+|+... +..||+|++++.... ...+.+|..++.+..+||||+++++++.+.+..|+||||++
T Consensus 43 ~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~ 122 (373)
T 2r5t_A 43 LKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYIN 122 (373)
T ss_dssp EEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred EEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEEEeCCC
Confidence 4689999999999999764 678999999765432 23445555553333389999999999999999999999999
Q ss_pred CCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCC---
Q 006677 418 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV--- 494 (635)
Q Consensus 418 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~--- 494 (635)
+|+|.+++... ..+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++....
T Consensus 123 gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~~ 194 (373)
T 2r5t_A 123 GGELFYHLQRE-----RCFLEPRARFYAAEIASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNS 194 (373)
T ss_dssp SCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCCC
T ss_pred CCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEECCCCCEEEeeCccccccccCCC
Confidence 99999999743 24889999999999999999999998 99999999999999999999999999975322
Q ss_pred -CCCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcc
Q 006677 495 -PATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRF 573 (635)
Q Consensus 495 -~~~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 573 (635)
.....||+.|+|||++.+..++.++|||||||++|||++|..||...+. ......+...... ..
T Consensus 195 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~------~~~~~~i~~~~~~---------~~ 259 (373)
T 2r5t_A 195 TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT------AEMYDNILNKPLQ---------LK 259 (373)
T ss_dssp CCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBH------HHHHHHHHHSCCC---------CC
T ss_pred ccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH------HHHHHHHHhcccC---------CC
Confidence 2244689999999999999999999999999999999999999975432 2222222222110 01
Q ss_pred cChHHHHHHHHHHHHHcccCCCCCCCCHHH
Q 006677 574 QNIEEEMVQMLQIGMACVAKVPDMRPNMDE 603 (635)
Q Consensus 574 ~~~~~~~~~l~~l~~~cl~~~P~~RPs~~e 603 (635)
... ...+.+++.+|++.||++||++.+
T Consensus 260 ~~~---~~~~~~li~~lL~~dp~~R~~~~~ 286 (373)
T 2r5t_A 260 PNI---TNSARHLLEGLLQKDRTKRLGAKD 286 (373)
T ss_dssp SSS---CHHHHHHHHHHTCSSGGGSTTTTT
T ss_pred CCC---CHHHHHHHHHHcccCHHhCCCCCC
Confidence 112 234567778999999999999853
No 172
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=3.2e-38 Score=342.15 Aligned_cols=251 Identities=22% Similarity=0.303 Sum_probs=186.4
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccCC---hHHHHHHHHHHHhhcCCCceeceeEEEEeC------CeeEEE
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSK------DEKLLV 412 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~------~~~~lv 412 (635)
.+.||+|+||+||+|... +++.||||++...... .+.+.+|+.+++.+ +||||+++++++... ...|+|
T Consensus 67 ~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~~~~~~~lv 145 (464)
T 3ttj_A 67 LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV-NHKNIISLLNVFTPQKTLEEFQDVYLV 145 (464)
T ss_dssp EEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHC-CCTTBCCCSEEECSCCSTTTCCEEEEE
T ss_pred EEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhC-CCCCCCcEEEEEccCCccccCCeEEEE
Confidence 468999999999999865 4788999999765332 45678899999999 999999999999654 356999
Q ss_pred EEeccCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCC
Q 006677 413 YDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM 492 (635)
Q Consensus 413 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~ 492 (635)
|||+++ +|.+.+.. .+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 146 ~E~~~~-~l~~~~~~-------~l~~~~~~~~~~qil~aL~~lH~~~---iiHrDlkp~NIll~~~~~~kl~DFG~a~~~ 214 (464)
T 3ttj_A 146 MELMDA-NLCQVIQM-------ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA 214 (464)
T ss_dssp EECCSE-EHHHHHTS-------CCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCCCC---
T ss_pred EeCCCC-CHHHHHhh-------cCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChHhEEEeCCCCEEEEEEEeeeec
Confidence 999976 56666642 2889999999999999999999998 999999999999999999999999999876
Q ss_pred CCC---CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHH---------------
Q 006677 493 NVP---ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQ--------------- 554 (635)
Q Consensus 493 ~~~---~~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~--------------- 554 (635)
... ....+|+.|+|||++.+..|+.++||||+||++|||++|+.||.+.+..+. +.....
T Consensus 215 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~--~~~i~~~lg~p~~~~~~~~~~ 292 (464)
T 3ttj_A 215 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ--WNKVIEQLGTPCPEFMKKLQP 292 (464)
T ss_dssp --CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHHHHCSCCHHHHTTSCH
T ss_pred CCCcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHhcCCCCHHHHHHcch
Confidence 543 234689999999999999999999999999999999999999986432111 000000
Q ss_pred ---HHhhhccc-ccc-chhhhh----c--ccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006677 555 ---SVVREEWT-AEV-FDVELM----R--FQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 555 ---~~~~~~~~-~~~-~d~~~~----~--~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 607 (635)
........ ... +..... . ..........+.+++.+||+.||++|||++|++++
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 293 TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp HHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred hhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00000000 000 000000 0 00011224567889999999999999999999984
No 173
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=6.6e-40 Score=346.76 Aligned_cols=243 Identities=13% Similarity=0.167 Sum_probs=185.2
Q ss_pred hccccccCceEEEEEEe-cCCCeEEEEEeecccC----ChHHHHHHHHHHHhhc--CCCceecee-------EEEEeCCe
Q 006677 343 AEVLGKGSYGTAYKAVL-EESTTVVVKRLKEVVV----GKRDFEQQMEIVGRVG--QHPNVVPLR-------AYYYSKDE 408 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~----~~~~~~~e~~~l~~l~--~h~niv~l~-------~~~~~~~~ 408 (635)
.+.||+|+||+||+|.. .+++.||||++..... ..+.+.+|++++..+. +||||++++ +++...+.
T Consensus 78 ~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 157 (377)
T 3byv_A 78 GTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQK 157 (377)
T ss_dssp EEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEECTTS
T ss_pred cceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhccCC
Confidence 46899999999999996 4589999999974421 2467889995554443 799999998 77665532
Q ss_pred -----------------eEEEEEeccCCChhhhccCCCCC--CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCC
Q 006677 409 -----------------KLLVYDYFASGSLSTLLHGNRGA--GRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIK 469 (635)
Q Consensus 409 -----------------~~lv~e~~~~g~L~~~l~~~~~~--~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk 469 (635)
.++||||+ +|+|.+++...... ....+++..+..++.||+.||+|||+.+ |+|||||
T Consensus 158 ~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivHrDik 233 (377)
T 3byv_A 158 KKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG---LVHTYLR 233 (377)
T ss_dssp CSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTT---EECSCCC
T ss_pred ccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCC---eecCCCC
Confidence 78999999 68999999753211 1123556888899999999999999998 9999999
Q ss_pred CCCeEEcCCCCeEEeecCCCCCCCCCC-CCCCCCcccCcccccCC-----------CCCCccchhhHHHHHHHHHhCCCC
Q 006677 470 ASNVLINQDLDGCISDFGLTPLMNVPA-TPSRSAGYRAPEVIETR-----------KHSHKSDVYSFGVLLLEMLTGKAP 537 (635)
Q Consensus 470 ~~NIll~~~~~~ki~DfGla~~~~~~~-~~~~~~~y~aPE~~~~~-----------~~~~k~Dvws~Gvvl~el~tg~~p 537 (635)
|+|||++.++.+||+|||+++...... ...+ +.|+|||++.+. .++.++|||||||++|||++|+.|
T Consensus 234 p~NIll~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~P 312 (377)
T 3byv_A 234 PVDIVLDQRGGVFLTGFEHLVRDGARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLP 312 (377)
T ss_dssp GGGEEECTTCCEEECCGGGCEETTCEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSCC
T ss_pred HHHEEEcCCCCEEEEechhheecCCcccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHCCCC
Confidence 999999999999999999998654432 3345 899999999887 899999999999999999999999
Q ss_pred CCCCCCCCCCChhHHHHHHhhhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHHHhh
Q 006677 538 LQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVR--MIEEVR 612 (635)
Q Consensus 538 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~--~L~~~~ 612 (635)
|......+.... + ....... ...+.+++.+||+.||++|||+.|+++ .++.+.
T Consensus 313 f~~~~~~~~~~~---------------~----~~~~~~~---~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~~ 367 (377)
T 3byv_A 313 ITKDAALGGSEW---------------I----FRSCKNI---PQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQLR 367 (377)
T ss_dssp C------CCSGG---------------G----GSSCCCC---CHHHHHHHHHHTCSSGGGCCCHHHHHTSHHHHHHH
T ss_pred Ccccccccchhh---------------h----hhhccCC---CHHHHHHHHHHcCCCchhCCCHHHHhhChHHHHHH
Confidence 976543332110 0 0001111 235667888999999999999999997 455544
No 174
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=4.1e-38 Score=336.25 Aligned_cols=203 Identities=23% Similarity=0.414 Sum_probs=156.4
Q ss_pred hHHHHHHhhccccccCceEEEEEEec---CCCeEEEEEeecccCChHHHHHHHHHHHhhcCCCceeceeEEEEe--CCee
Q 006677 335 LEDLLRASAEVLGKGSYGTAYKAVLE---ESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYS--KDEK 409 (635)
Q Consensus 335 ~~~l~~~~~~~lG~G~fg~Vy~~~~~---~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~--~~~~ 409 (635)
+.+.....+++||+|+||+||+|... ++..||+|++..... ...+.+|++++.++ +||||+++++++.. ....
T Consensus 18 ~~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~~ 95 (405)
T 3rgf_A 18 VEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI-SMSACREIALLREL-KHPNVISLQKVFLSHADRKV 95 (405)
T ss_dssp HHHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC-CHHHHHHHHHHHHC-CCTTBCCCCEEEEETTTTEE
T ss_pred hhhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC-CHHHHHHHHHHHhc-CCCCeeeEeeEEecCCCCeE
Confidence 33333333568999999999999965 467899999975433 45788999999999 89999999999965 5678
Q ss_pred EEEEEeccCCChhhhccCCC----CCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEE----cCCCCe
Q 006677 410 LLVYDYFASGSLSTLLHGNR----GAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLI----NQDLDG 481 (635)
Q Consensus 410 ~lv~e~~~~g~L~~~l~~~~----~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll----~~~~~~ 481 (635)
++||||+.+ +|.+++.... ......+++..+..++.||+.||+|||+.+ |+||||||+|||+ +.++.+
T Consensus 96 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~ 171 (405)
T 3rgf_A 96 WLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRV 171 (405)
T ss_dssp EEEEECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECCSSTTTTCE
T ss_pred EEEEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC---EeCCCcCHHHeEEecCCCCCCcE
Confidence 999999975 8888775322 111234899999999999999999999998 9999999999999 778999
Q ss_pred EEeecCCCCCCCCC-------CCCCCCCcccCcccccCC-CCCCccchhhHHHHHHHHHhCCCCCCCCCC
Q 006677 482 CISDFGLTPLMNVP-------ATPSRSAGYRAPEVIETR-KHSHKSDVYSFGVLLLEMLTGKAPLQSPTR 543 (635)
Q Consensus 482 ki~DfGla~~~~~~-------~~~~~~~~y~aPE~~~~~-~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~ 543 (635)
||+|||+++..... ....+|+.|+|||++.+. .++.++|||||||++|||++|+.||.....
T Consensus 172 kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~ 241 (405)
T 3rgf_A 172 KIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQE 241 (405)
T ss_dssp EECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC-
T ss_pred EEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccc
Confidence 99999999876432 234578899999999874 589999999999999999999999976543
No 175
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=3.2e-38 Score=318.71 Aligned_cols=237 Identities=23% Similarity=0.344 Sum_probs=174.0
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccC----ChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEecc
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV----GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 417 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~----~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 417 (635)
.+.||+|+||.||+|... +++.||+|++..... ..+.+.+|+++++++ +||||+++++++.+.+..++||||+
T Consensus 18 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~- 95 (275)
T 2eue_A 18 VKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLL-RHPHIIKLYDVIKSKDEIIMVIEYA- 95 (275)
T ss_dssp CC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSCEEEEEECC-
T ss_pred EEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhC-CCCCeEEEEEEEecCCeEEEEehhc-
Confidence 357999999999999864 578999999875432 245788999999999 8999999999999999999999999
Q ss_pred CCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCCC-
Q 006677 418 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA- 496 (635)
Q Consensus 418 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~~- 496 (635)
+++|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+|||++.......
T Consensus 96 ~~~l~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 167 (275)
T 2eue_A 96 GNELFDYIVQR-----DKMSEQEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF 167 (275)
T ss_dssp CEEHHHHHHTS-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTSCEEECCSSCC--------
T ss_pred CCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---CeeccCChHhEEECCCCCEEEeecccceeccCccc
Confidence 66888887643 34899999999999999999999998 9999999999999999999999999997654432
Q ss_pred --CCCCCCcccCcccccCCCC-CCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcc
Q 006677 497 --TPSRSAGYRAPEVIETRKH-SHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRF 573 (635)
Q Consensus 497 --~~~~~~~y~aPE~~~~~~~-~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 573 (635)
...+++.|+|||++.+..+ +.++||||||+++|||++|+.||.... ..............
T Consensus 168 ~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~------~~~~~~~~~~~~~~----------- 230 (275)
T 2eue_A 168 LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES------IPVLFKNISNGVYT----------- 230 (275)
T ss_dssp -------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHTCCC-----------
T ss_pred ccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHhCCCC-----------
Confidence 3457889999999988765 789999999999999999999997532 11112222111110
Q ss_pred cChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006677 574 QNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 574 ~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 607 (635)
........+.+++.+|++.||++|||++|++++
T Consensus 231 -~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 263 (275)
T 2eue_A 231 -LPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp -CCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred -CCccCCHHHHHHHHHHhhcCHhHCCCHHHHhhC
Confidence 001122346678889999999999999999873
No 176
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=8.5e-38 Score=334.93 Aligned_cols=242 Identities=21% Similarity=0.335 Sum_probs=184.9
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccC---------ChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEE
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV---------GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLV 412 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~---------~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv 412 (635)
.+.||+|+||+||+|... +++.||+|++..... ....+.+|+++++++ +||||+++++++. .+..++|
T Consensus 140 ~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~-~~~~~lv 217 (419)
T 3i6u_A 140 SKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKL-NHPCIIKIKNFFD-AEDYYIV 217 (419)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHC-CCTTBCCCCEEEE-SSEEEEE
T ss_pred EeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhC-CCCCEeeEEEEEe-cCceEEE
Confidence 578999999999999965 478999999975421 123578999999999 9999999999975 4568999
Q ss_pred EEeccCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCC---CeEEeecCCC
Q 006677 413 YDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDL---DGCISDFGLT 489 (635)
Q Consensus 413 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~---~~ki~DfGla 489 (635)
|||+++|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++ .+||+|||++
T Consensus 218 ~e~~~~g~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~LH~~~---ivHrDlkp~NIll~~~~~~~~~kl~DFG~a 289 (419)
T 3i6u_A 218 LELMEGGELFDKVVGN-----KRLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHS 289 (419)
T ss_dssp EECCTTCBGGGGTSSS-----CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESSSSSSCCEEECCSSTT
T ss_pred EEcCCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEecCCCcceEEEeecccc
Confidence 9999999999998743 34899999999999999999999998 99999999999997544 5999999999
Q ss_pred CCCCCCC---CCCCCCcccCcccccC---CCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcccc
Q 006677 490 PLMNVPA---TPSRSAGYRAPEVIET---RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTA 563 (635)
Q Consensus 490 ~~~~~~~---~~~~~~~y~aPE~~~~---~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 563 (635)
+...... ...+|+.|+|||++.+ ..++.++|||||||++|||++|+.||....... .+.... ......
T Consensus 290 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~--~~~~~i----~~~~~~ 363 (419)
T 3i6u_A 290 KILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV--SLKDQI----TSGKYN 363 (419)
T ss_dssp TSCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSC--CHHHHH----HTTCCC
T ss_pred eecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchH--HHHHHH----hcCCCC
Confidence 8765432 3457899999999853 567889999999999999999999997543222 111111 111000
Q ss_pred ccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006677 564 EVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 564 ~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 607 (635)
..... . ......+.+++.+||+.||++|||++|++++
T Consensus 364 -~~~~~---~---~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 400 (419)
T 3i6u_A 364 -FIPEV---W---AEVSEKALDLVKKLLVVDPKARFTTEEALRH 400 (419)
T ss_dssp -CCHHH---H---TTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred -CCchh---h---cccCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 00000 0 1123456778889999999999999999874
No 177
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=1.5e-38 Score=328.68 Aligned_cols=252 Identities=23% Similarity=0.368 Sum_probs=201.0
Q ss_pred hccccccCceEEEEEEec------CCCeEEEEEeecccC--ChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEE
Q 006677 343 AEVLGKGSYGTAYKAVLE------ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYD 414 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~------~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e 414 (635)
.+.||+|+||.||+|... .++.||+|++..... ....+.+|++++.++ +||||+++++++.+.+..++|||
T Consensus 30 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e 108 (322)
T 1p4o_A 30 SRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEF-NCHHVVRLLGVVSQGQPTLVIME 108 (322)
T ss_dssp EEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGC-CCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhc-CCCCEeeeEEEEccCCccEEEEE
Confidence 578999999999999864 367899999975433 234688899999999 89999999999999999999999
Q ss_pred eccCCChhhhccCCCC-----CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCC
Q 006677 415 YFASGSLSTLLHGNRG-----AGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLT 489 (635)
Q Consensus 415 ~~~~g~L~~~l~~~~~-----~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla 489 (635)
|+++|+|.+++..... .....+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++
T Consensus 109 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~NIli~~~~~~kl~Dfg~~ 185 (322)
T 1p4o_A 109 LMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMT 185 (322)
T ss_dssp CCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCSGGGEEECTTCCEEECCTTCC
T ss_pred eCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---CccCCCccceEEEcCCCeEEECcCccc
Confidence 9999999999975321 11234789999999999999999999998 999999999999999999999999998
Q ss_pred CCCCCCC------CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccc
Q 006677 490 PLMNVPA------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWT 562 (635)
Q Consensus 490 ~~~~~~~------~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (635)
....... ...+++.|+|||++.+..++.++||||||+++|||++ |..||..... .............
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~------~~~~~~~~~~~~~ 259 (322)
T 1p4o_A 186 RDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN------EQVLRFVMEGGLL 259 (322)
T ss_dssp CGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCH------HHHHHHHHTTCCC
T ss_pred cccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCH------HHHHHHHHcCCcC
Confidence 7653321 2234678999999998899999999999999999999 8999975432 1122222211110
Q ss_pred cccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhccC
Q 006677 563 AEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 615 (635)
Q Consensus 563 ~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~~~~ 615 (635)
. ........+.+++.+||+.||++|||+.|++++|+++....
T Consensus 260 ~-----------~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~~~ 301 (322)
T 1p4o_A 260 D-----------KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPG 301 (322)
T ss_dssp C-----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCTT
T ss_pred C-----------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhccC
Confidence 0 01122345677888999999999999999999999886543
No 178
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=8e-38 Score=324.75 Aligned_cols=254 Identities=24% Similarity=0.346 Sum_probs=191.7
Q ss_pred hccccccCceEEEEEEecC-CCeEEEEEeecccCC---hHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEeccC
Q 006677 343 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS 418 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~ 418 (635)
.+.||+|+||.||+|.... ++.||+|++...... .+.+.+|++++.++ +||||+++++++...+..++||||+++
T Consensus 30 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~ 108 (331)
T 4aaa_A 30 LGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQL-RHENLVNLLEVCKKKKRWYLVFEFVDH 108 (331)
T ss_dssp EEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEEECCSE
T ss_pred eeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhC-CCCCEeeEEEEeecCCEEEEEEecCCc
Confidence 4689999999999999764 788999998765443 34577899999999 899999999999999999999999999
Q ss_pred CChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCC---
Q 006677 419 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP--- 495 (635)
Q Consensus 419 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~--- 495 (635)
++|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 109 ~~l~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 180 (331)
T 4aaa_A 109 TILDDLELFP-----NGLDYQVVQKYLFQIINGIGFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEV 180 (331)
T ss_dssp EHHHHHHHST-----TCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCTTC---------
T ss_pred chHHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHHHCC---EEccCcChheEEEcCCCcEEEEeCCCceeecCCccc
Confidence 9998887532 24899999999999999999999998 999999999999999999999999999765432
Q ss_pred -CCCCCCCcccCcccccCC-CCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHH----------HHhh-hccc
Q 006677 496 -ATPSRSAGYRAPEVIETR-KHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQ----------SVVR-EEWT 562 (635)
Q Consensus 496 -~~~~~~~~y~aPE~~~~~-~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~----------~~~~-~~~~ 562 (635)
....+++.|+|||++.+. .++.++|||||||++|||++|+.||......+. +..... .... ....
T Consensus 181 ~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (331)
T 4aaa_A 181 YDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQ--LYHIMMCLGNLIPRHQELFNKNPVF 258 (331)
T ss_dssp ---CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH--HHHHHHHHCSCCHHHHHHHHHCGGG
T ss_pred cCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHH--HHHHHHHhCCCChhhhhHhhhcccc
Confidence 234578899999999875 689999999999999999999999976432211 000000 0000 0000
Q ss_pred cccchhhhhcccC----hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006677 563 AEVFDVELMRFQN----IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 563 ~~~~d~~~~~~~~----~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 607 (635)
.....+....... .......+.+++.+||+.||++|||++|++++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 307 (331)
T 4aaa_A 259 AGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH 307 (331)
T ss_dssp TTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred ccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 0000000000000 01123467788889999999999999999873
No 179
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=6.6e-38 Score=325.10 Aligned_cols=250 Identities=20% Similarity=0.294 Sum_probs=191.7
Q ss_pred hccccccCceEEEEEEe-cCCCeEEEEEeecccCChHHHHHHHHHHHhhcCCCceeceeEEEEe--CCeeEEEEEeccCC
Q 006677 343 AEVLGKGSYGTAYKAVL-EESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYS--KDEKLLVYDYFASG 419 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~--~~~~~lv~e~~~~g 419 (635)
.+.||+|+||+||+|.. .+++.||+|+++.. ..+.+.+|++++.++.+||||+++++++.. ....++||||++++
T Consensus 41 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~ 118 (330)
T 3nsz_A 41 VRKLGRGKYSEVFEAINITNNEKVVVKILKPV--KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNT 118 (330)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECSC--CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEECCCCC
T ss_pred EEEecccCCeEEEEEEECCCCcEEEEEEeccc--chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEeccCch
Confidence 46899999999999986 46789999998743 367899999999999669999999999988 56789999999999
Q ss_pred ChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCC-CeEEeecCCCCCCCCCC--
Q 006677 420 SLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDL-DGCISDFGLTPLMNVPA-- 496 (635)
Q Consensus 420 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~-~~ki~DfGla~~~~~~~-- 496 (635)
+|.+++.. +++..+..++.|++.||+|||+.+ |+||||||+|||++.++ .+||+|||+++......
T Consensus 119 ~l~~~~~~--------~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~ 187 (330)
T 3nsz_A 119 DFKQLYQT--------LTDYDIRFYMYEILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY 187 (330)
T ss_dssp CHHHHGGG--------CCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTTEEEECCCTTCEECCTTCCC
T ss_pred hHHHHHHh--------CCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCCcc
Confidence 99999852 889999999999999999999998 99999999999999777 89999999997654332
Q ss_pred -CCCCCCcccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcccccc-------ch
Q 006677 497 -TPSRSAGYRAPEVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEV-------FD 567 (635)
Q Consensus 497 -~~~~~~~y~aPE~~~~-~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d 567 (635)
...++..|+|||++.+ ..++.++|||||||++|||++|+.||...... ...+...... .......+. .+
T Consensus 188 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~-~~~l~~~~~~-~~~~~~~~~~~~~~~~~~ 265 (330)
T 3nsz_A 188 NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN-YDQLVRIAKV-LGTEDLYDYIDKYNIELD 265 (330)
T ss_dssp CSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSH-HHHHHHHHHH-HCHHHHHHHHHHTTCCCC
T ss_pred ccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCch-HHHHHHHHHh-cCCchhhhHHHHhccccc
Confidence 3457888999999977 67899999999999999999999999643211 0011111100 000000000 00
Q ss_pred hh---------------hhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006677 568 VE---------------LMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 568 ~~---------------~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 607 (635)
+. .............+.+++.+||+.||++|||++|++++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h 320 (330)
T 3nsz_A 266 PRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 320 (330)
T ss_dssp THHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred cchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 00 00000111123567788889999999999999999873
No 180
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=1.2e-37 Score=316.04 Aligned_cols=238 Identities=22% Similarity=0.323 Sum_probs=195.5
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeeccc----CChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEecc
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVV----VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 417 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 417 (635)
.+.||+|+||.||+|... ++..||+|++.... .....+.+|++++.++ +||||+++++++.+.+..++||||++
T Consensus 19 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~ 97 (284)
T 2vgo_A 19 GRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHL-RHPNILRMYNYFHDRKRIYLMLEFAP 97 (284)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred eheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcC-CCCCEeeEEEEEEcCCEEEEEEEeCC
Confidence 568999999999999976 46789999986542 2346788999999999 89999999999999999999999999
Q ss_pred CCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCC--
Q 006677 418 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP-- 495 (635)
Q Consensus 418 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~-- 495 (635)
+|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 98 ~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 169 (284)
T 2vgo_A 98 RGELYKELQKH-----GRFDEQRSATFMEELADALHYCHERK---VIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRR 169 (284)
T ss_dssp TEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECTTCCEEECCCTTCEECSSSCB
T ss_pred CCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEEcCCCCEEEecccccccCccccc
Confidence 99999999743 24899999999999999999999998 999999999999999999999999998655432
Q ss_pred CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcccC
Q 006677 496 ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQN 575 (635)
Q Consensus 496 ~~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 575 (635)
....+++.|+|||++.+..++.++||||||+++|||++|..||..... ......+...... ...
T Consensus 170 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------~~~~~~~~~~~~~---------~~~- 233 (284)
T 2vgo_A 170 RTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSH------TETHRRIVNVDLK---------FPP- 233 (284)
T ss_dssp CCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH------HHHHHHHHTTCCC---------CCT-
T ss_pred ccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCH------hHHHHHHhccccC---------CCC-
Confidence 234578899999999999999999999999999999999999975431 1111222111110 001
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006677 576 IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 576 ~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 607 (635)
.....+.+++.+|++.||++||+++|++++
T Consensus 234 --~~~~~~~~li~~~l~~~p~~Rps~~~ll~h 263 (284)
T 2vgo_A 234 --FLSDGSKDLISKLLRYHPPQRLPLKGVMEH 263 (284)
T ss_dssp --TSCHHHHHHHHHHSCSSGGGSCCHHHHHTC
T ss_pred --cCCHHHHHHHHHHhhcCHhhCCCHHHHhhC
Confidence 122356678889999999999999999983
No 181
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=2.5e-37 Score=314.66 Aligned_cols=242 Identities=24% Similarity=0.382 Sum_probs=191.3
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccCC---hHHHHHHHHHHHhhcCCCceeceeEEEEe----CCeeEEEEE
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYS----KDEKLLVYD 414 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~----~~~~~lv~e 414 (635)
.+.||+|+||+||+|... ++..||+|++...... .+.+.+|++++.++ +||||+++++++.. ....++|||
T Consensus 31 ~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~lv~e 109 (290)
T 1t4h_A 31 DIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGL-QHPNIVRFYDSWESTVKGKKCIVLVTE 109 (290)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEEESSSCEEEEEEEE
T ss_pred eeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhC-CCCCeeeeeeeeccccCCCceEEEEEE
Confidence 457999999999999975 4678999998765443 35688899999999 99999999999876 345789999
Q ss_pred eccCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEc-CCCCeEEeecCCCCCCC
Q 006677 415 YFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLIN-QDLDGCISDFGLTPLMN 493 (635)
Q Consensus 415 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~-~~~~~ki~DfGla~~~~ 493 (635)
|+++|+|.+++... ..+++..+..++.|++.||+|||+.+ ++|+||||||+||+++ +++.+||+|||++....
T Consensus 110 ~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~-~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~ 183 (290)
T 1t4h_A 110 LMTSGTLKTYLKRF-----KVMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR 183 (290)
T ss_dssp CCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred ecCCCCHHHHHHHc-----cCCCHHHHHHHHHHHHHHHHHHHcCC-CCEEECCCCHHHEEEECCCCCEEEeeCCCccccc
Confidence 99999999999743 34899999999999999999999975 4599999999999998 78999999999997654
Q ss_pred CCC--CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhh
Q 006677 494 VPA--TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELM 571 (635)
Q Consensus 494 ~~~--~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 571 (635)
... ...+++.|+|||++.+ .++.++||||||+++|||++|+.||.... ........... ......++.
T Consensus 184 ~~~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~-----~~~~~~~~~~~-~~~~~~~~~--- 253 (290)
T 1t4h_A 184 ASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQ-----NAAQIYRRVTS-GVKPASFDK--- 253 (290)
T ss_dssp TTSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCS-----SHHHHHHHHTT-TCCCGGGGG---
T ss_pred ccccccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcC-----cHHHHHHHHhc-cCCccccCC---
Confidence 432 3457889999998874 58999999999999999999999997532 11122222111 111111110
Q ss_pred cccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006677 572 RFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 572 ~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 607 (635)
.....+.+++.+||+.||++|||++|++++
T Consensus 254 ------~~~~~l~~li~~~l~~dp~~Rps~~ell~h 283 (290)
T 1t4h_A 254 ------VAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp ------CCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ------CCCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 111356788889999999999999999874
No 182
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=1.9e-37 Score=326.31 Aligned_cols=243 Identities=19% Similarity=0.362 Sum_probs=194.6
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccCC---------hHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEE
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG---------KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLV 412 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~---------~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv 412 (635)
.+.||+|+||.||+|... +|+.||||++...... .+.+.+|+.++.++.+||||+++++++......++|
T Consensus 99 ~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 178 (365)
T 2y7j_A 99 KDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLV 178 (365)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSSEEEEE
T ss_pred ceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCCEEEEE
Confidence 378999999999999985 6899999998754321 345778999999987899999999999999999999
Q ss_pred EEeccCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCC
Q 006677 413 YDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM 492 (635)
Q Consensus 413 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~ 492 (635)
|||+++|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||++...
T Consensus 179 ~e~~~g~~L~~~l~~~-----~~l~~~~~~~i~~qi~~~L~~LH~~g---i~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~ 250 (365)
T 2y7j_A 179 FDLMRKGELFDYLTEK-----VALSEKETRSIMRSLLEAVSFLHANN---IVHRDLKPENILLDDNMQIRLSDFGFSCHL 250 (365)
T ss_dssp ECCCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEeCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEEEecCccccc
Confidence 9999999999999742 34899999999999999999999998 999999999999999999999999998766
Q ss_pred CCC---CCCCCCCcccCcccccC------CCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcccc
Q 006677 493 NVP---ATPSRSAGYRAPEVIET------RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTA 563 (635)
Q Consensus 493 ~~~---~~~~~~~~y~aPE~~~~------~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 563 (635)
... ....+|+.|+|||++.+ ..++.++|||||||++|||++|..||..... ......+.......
T Consensus 251 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~------~~~~~~i~~~~~~~ 324 (365)
T 2y7j_A 251 EPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQ------ILMLRMIMEGQYQF 324 (365)
T ss_dssp CTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHTCCCC
T ss_pred CCCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCH------HHHHHHHHhCCCCC
Confidence 433 23457899999999863 3588999999999999999999999975321 11111111111110
Q ss_pred ccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006677 564 EVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 564 ~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 607 (635)
..+. .. .....+.+++.+|++.||++|||+.|++++
T Consensus 325 --~~~~---~~---~~~~~~~~li~~~L~~dP~~Rps~~ell~h 360 (365)
T 2y7j_A 325 --SSPE---WD---DRSSTVKDLISRLLQVDPEARLTAEQALQH 360 (365)
T ss_dssp --CHHH---HS---SSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred --CCcc---cc---cCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 0000 01 112356778889999999999999999873
No 183
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.5e-38 Score=327.87 Aligned_cols=254 Identities=24% Similarity=0.408 Sum_probs=198.1
Q ss_pred hccccccCceEEEEEEe-----cCCCeEEEEEeecccC-ChHHHHHHHHHHHhhcCCCceeceeEEEEeCC--eeEEEEE
Q 006677 343 AEVLGKGSYGTAYKAVL-----EESTTVVVKRLKEVVV-GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKD--EKLLVYD 414 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~-----~~~~~vavK~l~~~~~-~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~--~~~lv~e 414 (635)
.+.||+|+||.||+|.+ .+++.||+|++..... ..+.+.+|++++.++ +||||+++++++...+ ..++|||
T Consensus 46 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~lv~e 124 (326)
T 2w1i_A 46 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHDNIVKYKGVCYSAGRRNLKLIME 124 (326)
T ss_dssp EEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTC-CCTTBCCEEEEECC----CCEEEEC
T ss_pred eeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhC-CCCCeeeEEEEEEecCCCceEEEEE
Confidence 57899999999999984 3578899999876432 245788999999999 8999999999987654 6799999
Q ss_pred eccCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCC
Q 006677 415 YFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV 494 (635)
Q Consensus 415 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~ 494 (635)
|+++|+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.....
T Consensus 125 ~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~ 197 (326)
T 2w1i_A 125 YLPYGSLRDYLQKHK----ERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQ 197 (326)
T ss_dssp CCTTCBHHHHHHHST----TSSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEEETTEEEECCCTTCEECCS
T ss_pred CCCCCCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHhCC---EeccCCCcceEEEcCCCcEEEecCcchhhccc
Confidence 999999999997543 34899999999999999999999998 99999999999999999999999999976643
Q ss_pred CC-------CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCC--------CCCCC-hhHHHHHHhh
Q 006677 495 PA-------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTR--------DDMVD-LPRWVQSVVR 558 (635)
Q Consensus 495 ~~-------~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~--------~~~~~-~~~~~~~~~~ 558 (635)
.. ...++..|+|||.+.+..++.++||||||+++|||+||..||..... ..... ........+.
T Consensus 198 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (326)
T 2w1i_A 198 DKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLK 277 (326)
T ss_dssp SCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHH
T ss_pred cccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhh
Confidence 32 22356679999999988899999999999999999999999863210 00000 0000111111
Q ss_pred hccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhcc
Q 006677 559 EEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQS 614 (635)
Q Consensus 559 ~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~~~ 614 (635)
... ..+........+.+++.+||+.||++|||+.|+++.|+++++.
T Consensus 278 ~~~----------~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~ 323 (326)
T 2w1i_A 278 NNG----------RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQ 323 (326)
T ss_dssp TTC----------CCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred cCC----------CCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 110 0111122334677888899999999999999999999998753
No 184
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.7e-38 Score=334.43 Aligned_cols=251 Identities=20% Similarity=0.337 Sum_probs=188.6
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccCC---hHHHHHHHHHHHhhcCCCceeceeEEEEeCC------eeEEE
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKD------EKLLV 412 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~------~~~lv 412 (635)
.+.||+|+||.||+|... +++.||||++...... .+.+.+|+++++++ +||||+++++++...+ ..++|
T Consensus 30 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~~~~~~~lv 108 (367)
T 1cm8_A 30 LQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHM-RHENVIGLLDVFTPDETLDDFTDFYLV 108 (367)
T ss_dssp EEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHC-CBTTBCCCSEEECSCSSTTTCCCCEEE
T ss_pred eEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhC-CCcCCCCceeeEecCCccccCceEEEE
Confidence 467999999999999974 5889999999654333 35678899999999 8999999999997653 45999
Q ss_pred EEeccCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCC
Q 006677 413 YDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM 492 (635)
Q Consensus 413 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~ 492 (635)
|||+ +++|.+++.. ..+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||+++..
T Consensus 109 ~e~~-~~~L~~~~~~------~~l~~~~~~~~~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 178 (367)
T 1cm8_A 109 MPFM-GTDLGKLMKH------EKLGEDRIQFLVYQMLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLARQA 178 (367)
T ss_dssp EECC-SEEHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EecC-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCcCHHHEEEcCCCCEEEEeeeccccc
Confidence 9999 7899999874 23899999999999999999999998 999999999999999999999999999876
Q ss_pred CCCC-CCCCCCcccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhc------cccc
Q 006677 493 NVPA-TPSRSAGYRAPEVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREE------WTAE 564 (635)
Q Consensus 493 ~~~~-~~~~~~~y~aPE~~~~-~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~------~~~~ 564 (635)
.... ...+|+.|+|||++.+ ..++.++||||+||++|||++|+.||.+.+.. .....+.... ....
T Consensus 179 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~------~~l~~i~~~~g~~~~~~~~~ 252 (367)
T 1cm8_A 179 DSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHL------DQLKEIMKVTGTPPAEFVQR 252 (367)
T ss_dssp CSSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHHHCCCCHHHHHT
T ss_pred ccccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHHhcCCCCHHHHHH
Confidence 5433 3467889999999877 67999999999999999999999999864321 1111111100 0000
Q ss_pred c---------------chhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HHHhh
Q 006677 565 V---------------FDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM--IEEVR 612 (635)
Q Consensus 565 ~---------------~d~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~--L~~~~ 612 (635)
+ ....+. .........+.+++.+|++.||++|||++|++++ ++.+.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~~ 315 (367)
T 1cm8_A 253 LQSDEAKNYMKGLPELEKKDFA--SILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLH 315 (367)
T ss_dssp CSCHHHHHHHHHSCCCCCCCGG--GTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred hhhHHHHHHHHhCCCCCCCCHH--HHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHhhc
Confidence 0 000000 0001123456778889999999999999999983 55443
No 185
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=4.2e-38 Score=329.65 Aligned_cols=253 Identities=22% Similarity=0.285 Sum_probs=190.9
Q ss_pred hccccccCceEEEEEEe-cCCCeEEEEEeecccC---ChHHHHHHHHHHHhhcCCCceeceeEEEEeC--------CeeE
Q 006677 343 AEVLGKGSYGTAYKAVL-EESTTVVVKRLKEVVV---GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSK--------DEKL 410 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~---~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~--------~~~~ 410 (635)
.+.||+|+||+||+|.. .+++.||+|++..... ....+.+|++++.++ +||||+++++++... +..+
T Consensus 22 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~~~~~ 100 (351)
T 3mi9_A 22 LAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLL-KHENVVNLIEICRTKASPYNRCKGSIY 100 (351)
T ss_dssp EEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHC-CCTTBCCEEEEEEEC--------CEEE
T ss_pred EEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhc-cCCCcccHhheeeccccccccCCceEE
Confidence 46899999999999997 4688999999865432 245788999999999 899999999999874 4689
Q ss_pred EEEEeccCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCC
Q 006677 411 LVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTP 490 (635)
Q Consensus 411 lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~ 490 (635)
+||||+++ +|.+.+.... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++
T Consensus 101 lv~e~~~~-~l~~~l~~~~----~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~ 172 (351)
T 3mi9_A 101 LVFDFCEH-DLAGLLSNVL----VKFTLSEIKRVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLAR 172 (351)
T ss_dssp EEEECCSE-EHHHHHHCTT----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred EEEeccCC-CHHHHHhhcc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCHHHEEEcCCCCEEEccchhcc
Confidence 99999985 7777776432 34899999999999999999999998 9999999999999999999999999987
Q ss_pred CCCCC--------CCCCCCCcccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhh---
Q 006677 491 LMNVP--------ATPSRSAGYRAPEVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVR--- 558 (635)
Q Consensus 491 ~~~~~--------~~~~~~~~y~aPE~~~~-~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~--- 558 (635)
..... ....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||......+. ...+.....
T Consensus 173 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~---~~~i~~~~~~~~ 249 (351)
T 3mi9_A 173 AFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQ---LALISQLCGSIT 249 (351)
T ss_dssp ECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH---HHHHHHHHCCCC
T ss_pred cccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHH---HHHHHHHhCCCC
Confidence 65321 22346888999999876 4589999999999999999999999986432211 111111111
Q ss_pred hccccccchhhh--------hcccChHHH------HHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006677 559 EEWTAEVFDVEL--------MRFQNIEEE------MVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 559 ~~~~~~~~d~~~--------~~~~~~~~~------~~~l~~l~~~cl~~~P~~RPs~~evl~~ 607 (635)
............ ......... ...+.+++.+|++.||++|||++|++++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 312 (351)
T 3mi9_A 250 PEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 312 (351)
T ss_dssp TTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence 000000000000 000111111 2347788999999999999999999985
No 186
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=3.4e-38 Score=327.96 Aligned_cols=254 Identities=19% Similarity=0.295 Sum_probs=196.5
Q ss_pred hccccccCceEEEEEEe--cCCCeEEEEEeecccCChHHHHHHHHHHHhhcCCC------ceeceeEEEEeCCeeEEEEE
Q 006677 343 AEVLGKGSYGTAYKAVL--EESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHP------NVVPLRAYYYSKDEKLLVYD 414 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~--~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~------niv~l~~~~~~~~~~~lv~e 414 (635)
.+.||+|+||+||+|.. .+++.||+|+++......+.+.+|++++..+ +|+ +++++++++...+..++|||
T Consensus 19 ~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l-~~~~~~~~~~i~~~~~~~~~~~~~~lv~e 97 (339)
T 1z57_A 19 VDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHL-NTTDPNSTFRCVQMLEWFEHHGHICIVFE 97 (339)
T ss_dssp EEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHH-HHHCTTCTTCBCCEEEEEEETTEEEEEEE
T ss_pred EEEEecCCCeEEEEEEecCCCCcEEEEEEEecCCchhHHHHHHHHHHHHh-hhcCCCCceeeEeeecccccCCcEEEEEc
Confidence 46799999999999986 3578899999976544456788899998888 444 59999999999999999999
Q ss_pred eccCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcC-----------------
Q 006677 415 YFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQ----------------- 477 (635)
Q Consensus 415 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~----------------- 477 (635)
|+ +++|.+++.... ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.
T Consensus 98 ~~-~~~l~~~l~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~ 170 (339)
T 1z57_A 98 LL-GLSTYDFIKENG---FLPFRLDHIRKMAYQICKSVNFLHSNK---LTHTDLKPENILFVQSDYTEAYNPKIKRDERT 170 (339)
T ss_dssp CC-CCBHHHHHHHTT---TCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESCCCEEEEEC----CEEEE
T ss_pred CC-CCCHHHHHHhcC---CCCCcHHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHEEEeccccccccCCcccccccc
Confidence 99 889999997543 235899999999999999999999998 999999999999987
Q ss_pred --CCCeEEeecCCCCCCCCC-CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHH
Q 006677 478 --DLDGCISDFGLTPLMNVP-ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQ 554 (635)
Q Consensus 478 --~~~~ki~DfGla~~~~~~-~~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~ 554 (635)
++.+||+|||++...... ....+|+.|+|||++.+..++.++|||||||++|||++|..||...+..+.. ....
T Consensus 171 ~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~---~~~~ 247 (339)
T 1z57_A 171 LINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHL---AMME 247 (339)
T ss_dssp ESCCCEEECCCSSCEETTSCCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHH---HHHH
T ss_pred ccCCCceEeeCcccccCccccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHH---HHHH
Confidence 678999999999765543 3446789999999999999999999999999999999999999864422211 1111
Q ss_pred HHhhhc---c-----ccccc---------------------hhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHH
Q 006677 555 SVVREE---W-----TAEVF---------------------DVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVV 605 (635)
Q Consensus 555 ~~~~~~---~-----~~~~~---------------------d~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl 605 (635)
...... + ....+ ................+.+++.+||+.||++|||++|++
T Consensus 248 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell 327 (339)
T 1z57_A 248 RILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREAL 327 (339)
T ss_dssp HHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHT
T ss_pred HHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHh
Confidence 111000 0 00000 000000111234456788999999999999999999998
Q ss_pred HH
Q 006677 606 RM 607 (635)
Q Consensus 606 ~~ 607 (635)
++
T Consensus 328 ~h 329 (339)
T 1z57_A 328 KH 329 (339)
T ss_dssp TS
T ss_pred cC
Confidence 74
No 187
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=2e-37 Score=338.80 Aligned_cols=241 Identities=21% Similarity=0.335 Sum_probs=195.4
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecc---cCChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEeccC
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEV---VVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS 418 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~---~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~ 418 (635)
.++||+|+||+||+|... +++.||||++... ......+.+|+++++++ +||||+++++++......++||||+++
T Consensus 27 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lv~e~~~~ 105 (486)
T 3mwu_A 27 VCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL-DHPNIMKLFEILEDSSSFYIVGELYTG 105 (486)
T ss_dssp EEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred eEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhC-CCCCcCeEEEEEEcCCEEEEEEEcCCC
Confidence 578999999999999975 5789999998654 23467789999999999 999999999999999999999999999
Q ss_pred CChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEc---CCCCeEEeecCCCCCCCCC
Q 006677 419 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLIN---QDLDGCISDFGLTPLMNVP 495 (635)
Q Consensus 419 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~---~~~~~ki~DfGla~~~~~~ 495 (635)
|+|.+.+... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++ .++.+||+|||+++.....
T Consensus 106 ~~L~~~~~~~-----~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~ 177 (486)
T 3mwu_A 106 GELFDEIIKR-----KRFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN 177 (486)
T ss_dssp CBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC
T ss_pred CcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCchHHEEEecCCCCCCEEEEECCcCeECCCC
Confidence 9999988643 24899999999999999999999998 99999999999995 4567999999999866543
Q ss_pred C---CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhc
Q 006677 496 A---TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMR 572 (635)
Q Consensus 496 ~---~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 572 (635)
. ...+|+.|+|||++.+ .++.++||||+||++|||++|+.||.+... ......+....+.... ..
T Consensus 178 ~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~------~~~~~~i~~~~~~~~~-----~~ 245 (486)
T 3mwu_A 178 TKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNE------YDILKRVETGKYAFDL-----PQ 245 (486)
T ss_dssp ----CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHTCCCSCS-----GG
T ss_pred CccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHhCCCCCCC-----cc
Confidence 2 3458899999999976 589999999999999999999999975432 1222222222211110 01
Q ss_pred ccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006677 573 FQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 573 ~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 607 (635)
.. .....+.+++.+||+.||++|||+.|++++
T Consensus 246 ~~---~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 246 WR---TISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp GG---GSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred cC---CCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 11 122356678889999999999999999985
No 188
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.3e-37 Score=322.23 Aligned_cols=243 Identities=23% Similarity=0.385 Sum_probs=191.0
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccCChHHHHHHHHHHHhhcCCCceeceeEEEEe------CCeeEEEEEe
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYS------KDEKLLVYDY 415 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~------~~~~~lv~e~ 415 (635)
.+.||+|+||.||+|... +++.||+|++.........+.+|+.++.++.+||||+++++++.. .+..++||||
T Consensus 29 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~ 108 (326)
T 2x7f_A 29 VELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEF 108 (326)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSTTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEEEEEEEC
T ss_pred EEEeccCCCEEEEEEEECCCCCeEEEEEEecCcccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccceEEEEEEc
Confidence 468999999999999974 688999999987666678899999999999789999999999987 4678999999
Q ss_pred ccCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCC
Q 006677 416 FASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP 495 (635)
Q Consensus 416 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~ 495 (635)
+++|+|.+++.... ...+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 109 ~~~~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 182 (326)
T 2x7f_A 109 CGAGSVTDLIKNTK---GNTLKEEWIAYICREILRGLSHLHQHK---VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRT 182 (326)
T ss_dssp CTTEEHHHHHHHSG---GGCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTCCEEECCCTTTC-----
T ss_pred CCCCcHHHHHHhcc---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCcHHHEEEcCCCCEEEeeCcCceecCcC
Confidence 99999999997543 235899999999999999999999998 999999999999999999999999998765432
Q ss_pred ----CCCCCCCcccCccccc-----CCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccc
Q 006677 496 ----ATPSRSAGYRAPEVIE-----TRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVF 566 (635)
Q Consensus 496 ----~~~~~~~~y~aPE~~~-----~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 566 (635)
....+++.|+|||++. +..++.++|||||||++|||++|..||...... .......... .....
T Consensus 183 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------~~~~~~~~~~-~~~~~ 255 (326)
T 2x7f_A 183 VGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPM------RALFLIPRNP-APRLK 255 (326)
T ss_dssp --------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHH------HHHHHHHHSC-CCCCS
T ss_pred ccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHH------HHHHHhhcCc-cccCC
Confidence 2345788999999987 567899999999999999999999999753311 1111111111 10000
Q ss_pred hhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006677 567 DVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 567 d~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 607 (635)
... ....+.+++.+||..||++||+++|++++
T Consensus 256 ------~~~---~~~~l~~li~~~l~~dp~~Rps~~~ll~h 287 (326)
T 2x7f_A 256 ------SKK---WSKKFQSFIESCLVKNHSQRPATEQLMKH 287 (326)
T ss_dssp ------CSC---SCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred ------ccc---cCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 011 12356778889999999999999999883
No 189
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=1.6e-37 Score=318.45 Aligned_cols=242 Identities=20% Similarity=0.332 Sum_probs=194.3
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccC-ChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEeccCCC
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV-GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGS 420 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 420 (635)
.+.||+|+||+||++... +++.||+|++..... ..+.+.+|++++.++ +||||+++++++...+..++||||+++++
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 92 (304)
T 2jam_A 14 MEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKI-KHENIVTLEDIYESTTHYYLVMQLVSGGE 92 (304)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred eeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhC-CCCCeeehhhhcccCCEEEEEEEcCCCcc
Confidence 578999999999999975 588999999976532 345688999999999 99999999999999999999999999999
Q ss_pred hhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEE---cCCCCeEEeecCCCCCCCCCC-
Q 006677 421 LSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLI---NQDLDGCISDFGLTPLMNVPA- 496 (635)
Q Consensus 421 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll---~~~~~~ki~DfGla~~~~~~~- 496 (635)
|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||++ +.++.+||+|||++.......
T Consensus 93 L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~ 164 (304)
T 2jam_A 93 LFDRILER-----GVYTEKDASLVIQQVLSAVKYLHENG---IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIM 164 (304)
T ss_dssp HHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCBTT
T ss_pred HHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEecCCCCCCEEEccCCcceecCCCcc
Confidence 99998643 24899999999999999999999998 9999999999999 788999999999987654332
Q ss_pred -CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcccC
Q 006677 497 -TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQN 575 (635)
Q Consensus 497 -~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 575 (635)
...+++.|+|||++.+..++.++||||||+++|||++|+.||..... ......+....... .. ..
T Consensus 165 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------~~~~~~i~~~~~~~---~~-----~~ 230 (304)
T 2jam_A 165 STACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETE------SKLFEKIKEGYYEF---ES-----PF 230 (304)
T ss_dssp HHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCH------HHHHHHHHHCCCCC---CT-----TT
T ss_pred ccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH------HHHHHHHHcCCCCC---Cc-----cc
Confidence 12378899999999999999999999999999999999999975432 11122222111100 00 00
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006677 576 IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 576 ~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 607 (635)
.......+.+++.+|++.||++|||++|++++
T Consensus 231 ~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (304)
T 2jam_A 231 WDDISESAKDFICHLLEKDPNERYTCEKALSH 262 (304)
T ss_dssp TTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred cccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 01123456778889999999999999999984
No 190
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=1.5e-37 Score=327.96 Aligned_cols=258 Identities=19% Similarity=0.271 Sum_probs=194.8
Q ss_pred hccccccCceEEEEEEe-cCCCeEEEEEeecccCChHHHHHHHHHHHhhc----------CCCceeceeEEEEeCC----
Q 006677 343 AEVLGKGSYGTAYKAVL-EESTTVVVKRLKEVVVGKRDFEQQMEIVGRVG----------QHPNVVPLRAYYYSKD---- 407 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~----------~h~niv~l~~~~~~~~---- 407 (635)
.+.||+|+||+||+|.. .+++.||||++.......+.+.+|++++.++. .|+||+++++++...+
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 103 (373)
T 1q8y_A 24 VRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGV 103 (373)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETTEE
T ss_pred EEeeeecCCeEEEEEEecCCCcEEEEEEecCCccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhccCCCCc
Confidence 46899999999999996 45788999999765445667888999988873 2899999999998654
Q ss_pred eeEEEEEeccCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCCceecCCCCCCeEEc------CCCC
Q 006677 408 EKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSM-GGPKFTHGNIKASNVLIN------QDLD 480 (635)
Q Consensus 408 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-~~~~ivH~Dlk~~NIll~------~~~~ 480 (635)
..++||||+ +++|.+++..... ..+++..+..++.||+.||+|||++ + |+||||||+|||++ ..+.
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~~~~---~~~~~~~~~~i~~qi~~aL~~lH~~~~---ivH~Dikp~NIll~~~~~~~~~~~ 176 (373)
T 1q8y_A 104 HVVMVFEVL-GENLLALIKKYEH---RGIPLIYVKQISKQLLLGLDYMHRRCG---IIHTDIKPENVLMEIVDSPENLIQ 176 (373)
T ss_dssp EEEEEECCC-CEEHHHHHHHTTT---SCCCHHHHHHHHHHHHHHHHHHHHTTC---EECSCCSGGGEEEEEEETTTTEEE
T ss_pred eEEEEEecC-CCCHHHHHHHhhc---cCCcHHHHHHHHHHHHHHHHHHHhcCC---EEecCCChHHeEEeccCCCcCcce
Confidence 678999999 8899999975432 3489999999999999999999998 8 99999999999994 4457
Q ss_pred eEEeecCCCCCCCCC-CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhh
Q 006677 481 GCISDFGLTPLMNVP-ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVRE 559 (635)
Q Consensus 481 ~ki~DfGla~~~~~~-~~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 559 (635)
+||+|||++...... ....+|+.|+|||++.+..++.++|||||||++|||++|+.||.................+...
T Consensus 177 ~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 256 (373)
T 1q8y_A 177 IKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIEL 256 (373)
T ss_dssp EEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHH
T ss_pred EEEcccccccccCCCCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHHh
Confidence 999999999766543 3446789999999999999999999999999999999999999865433322211111111110
Q ss_pred --cc----------c----------ccc--------chhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006677 560 --EW----------T----------AEV--------FDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 560 --~~----------~----------~~~--------~d~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 607 (635)
.. . ..+ .+...............+.+++.+||+.||++|||++|++++
T Consensus 257 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 334 (373)
T 1q8y_A 257 LGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNH 334 (373)
T ss_dssp HCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTC
T ss_pred cCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhhC
Confidence 00 0 000 000001112334566788899999999999999999999983
No 191
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=5.9e-38 Score=329.69 Aligned_cols=191 Identities=21% Similarity=0.373 Sum_probs=167.0
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccC--ChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEeccCC
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASG 419 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g 419 (635)
.+.||+|+||+||+|... ++..||+|++..... ..+.+.+|++++.++ +||||+++++++..++..++||||+++|
T Consensus 38 ~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 116 (360)
T 3eqc_A 38 ISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC-NSPYIVGFYGAFYSDGEISICMEHMDGG 116 (360)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGC-CCTTBCCEEEEEEETTEEEEEECCCTTC
T ss_pred eeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHC-CCCCEEEEeEEEEECCEEEEEEECCCCC
Confidence 467999999999999976 578899999876532 245688999999999 9999999999999999999999999999
Q ss_pred ChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCC--CC
Q 006677 420 SLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSM-GGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV--PA 496 (635)
Q Consensus 420 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~--~~ 496 (635)
+|.+++... ..+++..+..++.|++.||+|||+. + |+||||||+||+++.++.+||+|||++..... ..
T Consensus 117 ~L~~~l~~~-----~~~~~~~~~~i~~~i~~~l~~lh~~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 188 (360)
T 3eqc_A 117 SLDQVLKKA-----GRIPEQILGKVSIAVIKGLTYLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN 188 (360)
T ss_dssp BHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHHHC---CCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC--
T ss_pred CHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHhCC---EEcCCccHHHEEECCCCCEEEEECCCCccccccccc
Confidence 999999743 2489999999999999999999996 7 99999999999999999999999999864422 23
Q ss_pred CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCC
Q 006677 497 TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPT 542 (635)
Q Consensus 497 ~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~ 542 (635)
...+++.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 189 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 234 (360)
T 3eqc_A 189 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPD 234 (360)
T ss_dssp --CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCC
T ss_pred CCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 3468899999999999999999999999999999999999997543
No 192
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=1.6e-38 Score=323.41 Aligned_cols=250 Identities=25% Similarity=0.360 Sum_probs=188.8
Q ss_pred hccccccCceEEEEEEecC--CC--eEEEEEeecccC----ChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEE
Q 006677 343 AEVLGKGSYGTAYKAVLEE--ST--TVVVKRLKEVVV----GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYD 414 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~~--~~--~vavK~l~~~~~----~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e 414 (635)
.+.||+|+||+||+|.+.. ++ .||+|+++.... ..+.+.+|++++.++ +||||+++++++.... .++|+|
T Consensus 23 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~-~~~v~e 100 (291)
T 1u46_A 23 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL-DHRNLIRLYGVVLTPP-MKMVTE 100 (291)
T ss_dssp EEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHC-CCTTBCCEEEEECSSS-CEEEEE
T ss_pred eeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhC-CCCCcccEEEEEccCC-ceeeEe
Confidence 4689999999999998642 33 589999875432 245788999999999 8999999999987654 889999
Q ss_pred eccCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCC
Q 006677 415 YFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV 494 (635)
Q Consensus 415 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~ 494 (635)
|+++|+|.+++.... ..+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||++.....
T Consensus 101 ~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~ 173 (291)
T 1u46_A 101 LAPLGSLLDRLRKHQ----GHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQ 173 (291)
T ss_dssp CCTTCBHHHHHHHHG----GGSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEEETTEEEECCCTTCEECCC
T ss_pred cccCCCHHHHHHhcc----CCcCHHHHHHHHHHHHHHHHHHHhCC---cccCCCchheEEEcCCCCEEEccccccccccc
Confidence 999999999997532 34899999999999999999999998 99999999999999999999999999876643
Q ss_pred CC-------CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccc
Q 006677 495 PA-------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVF 566 (635)
Q Consensus 495 ~~-------~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 566 (635)
.. ...++..|+|||++.+..++.++||||||+++|||++ |..||..... ......+.......
T Consensus 174 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~------~~~~~~~~~~~~~~--- 244 (291)
T 1u46_A 174 NDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG------SQILHKIDKEGERL--- 244 (291)
T ss_dssp -CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCH------HHHHHHHHTSCCCC---
T ss_pred cccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCH------HHHHHHHHccCCCC---
Confidence 22 2235667999999998889999999999999999999 9999975432 12222222211110
Q ss_pred hhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhccCCC
Q 006677 567 DVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSE 617 (635)
Q Consensus 567 d~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~~~~~~ 617 (635)
.........+.+++.+||+.+|++|||+.|++++|+++......
T Consensus 245 -------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~ 288 (291)
T 1u46_A 245 -------PRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTDMR 288 (291)
T ss_dssp -------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-----
T ss_pred -------CCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCccchh
Confidence 01112234577888899999999999999999999998865543
No 193
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.2e-37 Score=320.77 Aligned_cols=240 Identities=25% Similarity=0.402 Sum_probs=191.9
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccCChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEeccCCCh
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSL 421 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 421 (635)
.+.||+|+||.||+|... +++.||+|++.... ..+.+.+|++++.++ +||||+++++++...+..++||||+++|+|
T Consensus 34 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 111 (314)
T 3com_A 34 LEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES-DLQEIIKEISIMQQC-DSPHVVKYYGSYFKNTDLWIVMEYCGAGSV 111 (314)
T ss_dssp EEECC----CEEEEEEETTTCCEEEEEEEETTS-CCHHHHHHHHHHHTC-CCTTBCCEEEEEEETTEEEEEEECCTTEEH
T ss_pred heeeccCCCeEEEEEEECCCCCEEEEEecCchH-HHHHHHHHHHHHHhC-CCCCCccEEEEEEeCCEEEEEeecCCCCCH
Confidence 468999999999999976 48899999997643 456789999999999 999999999999999999999999999999
Q ss_pred hhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCC----CC
Q 006677 422 STLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP----AT 497 (635)
Q Consensus 422 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~----~~ 497 (635)
.+++... ...+++..+..++.|++.||+|||+.+ ++|+||||+||+++.++.+||+|||++...... ..
T Consensus 112 ~~~~~~~----~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 184 (314)
T 3com_A 112 SDIIRLR----NKTLTEDEIATILQSTLKGLEYLHFMR---KIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNT 184 (314)
T ss_dssp HHHHHHH----TCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECBTTBSCBCC
T ss_pred HHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHhCC---CcCCCcCHHHEEECCCCCEEEeecccchhhhhhccccCc
Confidence 9998632 234899999999999999999999998 999999999999999999999999998665432 23
Q ss_pred CCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcccChH
Q 006677 498 PSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNIE 577 (635)
Q Consensus 498 ~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 577 (635)
..+++.|+|||++.+..++.++||||||+++|||++|+.||..... ........ ....... ....
T Consensus 185 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~~~~~~~-~~~~~~~--------~~~~ 249 (314)
T 3com_A 185 VIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHP------MRAIFMIP-TNPPPTF--------RKPE 249 (314)
T ss_dssp CCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCH------HHHHHHHH-HSCCCCC--------SSGG
T ss_pred cCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCCh------HHHHHHHh-cCCCccc--------CCcc
Confidence 4578889999999999999999999999999999999999975321 11111111 1110000 0111
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006677 578 EEMVQMLQIGMACVAKVPDMRPNMDEVVR 606 (635)
Q Consensus 578 ~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 606 (635)
.....+.+++.+||+.||++|||+.|+++
T Consensus 250 ~~~~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 250 LWSDNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp GSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred cCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 12345678888999999999999999987
No 194
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=7.5e-38 Score=339.74 Aligned_cols=181 Identities=28% Similarity=0.440 Sum_probs=146.3
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccCC---hHHHHHHHHHHHhhcCCCceeceeEEEEeC-----CeeEEEE
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSK-----DEKLLVY 413 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~-----~~~~lv~ 413 (635)
.++||+|+||+||+|... +++.||||++...... .+.+.+|++++.++ +||||+++++++... ...|+||
T Consensus 58 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~~~lv~ 136 (458)
T 3rp9_A 58 RHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRL-NHDHVVKVLDIVIPKDVEKFDELYVVL 136 (458)
T ss_dssp CCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHC-CCTTBCCEEEECCCSCTTTCCCEEEEE
T ss_pred eeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhC-CCCCCCceEEEEecCCcccCceEEEEE
Confidence 468999999999999865 5789999999765333 35688999999999 999999999998543 4689999
Q ss_pred EeccCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCC
Q 006677 414 DYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN 493 (635)
Q Consensus 414 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~ 493 (635)
||+ +|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 137 e~~-~~~L~~~~~~~-----~~l~~~~~~~~~~qi~~aL~~LH~~~---iiHrDlKp~NILl~~~~~~kl~DFGla~~~~ 207 (458)
T 3rp9_A 137 EIA-DSDFKKLFRTP-----VYLTELHIKTLLYNLLVGVKYVHSAG---ILHRDLKPANCLVNQDCSVKVCDFGLARTVD 207 (458)
T ss_dssp CCC-SEEHHHHHHSS-----CCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTCCEEECCCTTCBCTT
T ss_pred ecc-ccchhhhcccC-----CCCCHHHHHHHHHHHHHHHHHHHhCC---cCCCCCChhhEEECCCCCEeecccccchhcc
Confidence 998 46999998742 34999999999999999999999998 9999999999999999999999999998754
Q ss_pred CC-------------------------------CCCCCCCcccCcccc-cCCCCCCccchhhHHHHHHHHHh
Q 006677 494 VP-------------------------------ATPSRSAGYRAPEVI-ETRKHSHKSDVYSFGVLLLEMLT 533 (635)
Q Consensus 494 ~~-------------------------------~~~~~~~~y~aPE~~-~~~~~~~k~Dvws~Gvvl~el~t 533 (635)
.. ....+|+.|+|||++ ....++.++|||||||++|||++
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~ellt 279 (458)
T 3rp9_A 208 YPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLN 279 (458)
T ss_dssp SCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHT
T ss_pred CccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHH
Confidence 22 123468889999986 56679999999999999999999
No 195
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=9.2e-38 Score=318.56 Aligned_cols=238 Identities=21% Similarity=0.348 Sum_probs=194.8
Q ss_pred hccccccCceEEEEEEecC-CCeEEEEEeecccC----ChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEecc
Q 006677 343 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVVV----GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 417 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~~----~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 417 (635)
.+.||+|+||.||+|...+ ++.||+|++..... ..+.+.+|+.+++++ +||||+++++++...+..++||||++
T Consensus 20 ~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~ 98 (294)
T 2rku_A 20 GRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-AHQHVVGFHGFFEDNDFVFVVLELCR 98 (294)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred EEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhC-CCCCEeeeeeeeccCCEEEEEEecCC
Confidence 4689999999999999764 67899999876532 245678899999999 99999999999999999999999999
Q ss_pred CCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCC--
Q 006677 418 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP-- 495 (635)
Q Consensus 418 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~-- 495 (635)
+++|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 99 ~~~L~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~ 170 (294)
T 2rku_A 99 RRSLLELHKRR-----KALTEPEARYYLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE 170 (294)
T ss_dssp TCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEECCSTTC
T ss_pred CCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEcCCCCEEEEeccCceecccCcc
Confidence 99999988642 24899999999999999999999998 999999999999999999999999998765422
Q ss_pred --CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcc
Q 006677 496 --ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRF 573 (635)
Q Consensus 496 --~~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 573 (635)
....+++.|+|||.+.+..++.++||||||+++|||++|+.||..... ............. ..
T Consensus 171 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~------~~~~~~~~~~~~~---------~~ 235 (294)
T 2rku_A 171 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL------KETYLRIKKNEYS---------IP 235 (294)
T ss_dssp CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSH------HHHHHHHHTTCCC---------CC
T ss_pred ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHhhccCC---------Cc
Confidence 234578899999999998999999999999999999999999975431 1111111111110 00
Q ss_pred cChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006677 574 QNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 574 ~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 607 (635)
......+.+++.+||+.||++|||++|++++
T Consensus 236 ---~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 236 ---KHINPVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp ---TTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred ---cccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 1112356678889999999999999999985
No 196
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=7e-38 Score=354.02 Aligned_cols=238 Identities=24% Similarity=0.307 Sum_probs=195.9
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeeccc----CChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEecc
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVV----VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 417 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 417 (635)
.++||+|+||.||+|... +++.||||+++... ...+.+..|..++..+.+||||+.+++++.+.+..|+||||++
T Consensus 346 ~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~lV~E~~~ 425 (674)
T 3pfq_A 346 LMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVN 425 (674)
T ss_dssp EEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEEEEECCC
T ss_pred EEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEEEEeCcC
Confidence 468999999999999976 46789999997542 2345677888899888789999999999999999999999999
Q ss_pred CCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCC---
Q 006677 418 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV--- 494 (635)
Q Consensus 418 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~--- 494 (635)
+|+|.++++.. ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 426 gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~g---IiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~ 497 (674)
T 3pfq_A 426 GGDLMYHIQQV-----GRFKEPHAVFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV 497 (674)
T ss_dssp SCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTS---EECCCCCSTTEEECSSSCEEECCCTTCEECCCTTC
T ss_pred CCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---eEeccCChhhEEEcCCCcEEEeecceeeccccCCc
Confidence 99999999753 24899999999999999999999998 99999999999999999999999999975322
Q ss_pred -CCCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcc
Q 006677 495 -PATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRF 573 (635)
Q Consensus 495 -~~~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 573 (635)
.....||+.|+|||++.+..|+.++|||||||++|||++|+.||.+.+. ......+...... ..
T Consensus 498 ~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~------~~~~~~i~~~~~~---------~p 562 (674)
T 3pfq_A 498 TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE------DELFQSIMEHNVA---------YP 562 (674)
T ss_dssp CBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHSSCCC---------CC
T ss_pred ccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCH------HHHHHHHHhCCCC---------CC
Confidence 2245689999999999999999999999999999999999999986432 2223333322111 01
Q ss_pred cChHHHHHHHHHHHHHcccCCCCCCCCH-----HHHHH
Q 006677 574 QNIEEEMVQMLQIGMACVAKVPDMRPNM-----DEVVR 606 (635)
Q Consensus 574 ~~~~~~~~~l~~l~~~cl~~~P~~RPs~-----~evl~ 606 (635)
.....++.+++.+||+.||++||++ +||++
T Consensus 563 ---~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~ 597 (674)
T 3pfq_A 563 ---KSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 597 (674)
T ss_dssp ---TTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred ---ccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence 1122356677789999999999998 67765
No 197
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=5.3e-38 Score=325.53 Aligned_cols=252 Identities=23% Similarity=0.352 Sum_probs=196.8
Q ss_pred hccccccCceEEEEEEec------CCCeEEEEEeecccC--ChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEE
Q 006677 343 AEVLGKGSYGTAYKAVLE------ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYD 414 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~------~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e 414 (635)
.+.||+|+||.||+|... ++..||||++..... ...++.+|+.++.++ +||||+++++++...+..++|||
T Consensus 35 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e 113 (327)
T 2yfx_A 35 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF-NHQNIVRCIGVSLQSLPRFILME 113 (327)
T ss_dssp EEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSCEEEEE
T ss_pred EEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhC-CCCCCCeEEEEEcCCCCcEEEEe
Confidence 468999999999999842 467899999965432 245688899999999 99999999999999999999999
Q ss_pred eccCCChhhhccCCCCC--CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcC---CCCeEEeecCCC
Q 006677 415 YFASGSLSTLLHGNRGA--GRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQ---DLDGCISDFGLT 489 (635)
Q Consensus 415 ~~~~g~L~~~l~~~~~~--~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~---~~~~ki~DfGla 489 (635)
|+++|+|.+++...... ....+++..+..++.|++.||+|||+.+ |+||||||+||+++. +..+||+|||++
T Consensus 114 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~---i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~ 190 (327)
T 2yfx_A 114 LMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMA 190 (327)
T ss_dssp CCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEECCCHHH
T ss_pred cCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC---eecCcCCHhHEEEecCCCcceEEECccccc
Confidence 99999999999765321 1245899999999999999999999998 999999999999984 456999999988
Q ss_pred CCCCCC------CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccc
Q 006677 490 PLMNVP------ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWT 562 (635)
Q Consensus 490 ~~~~~~------~~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (635)
...... ....+++.|+|||++.+..++.++||||||+++|||+| |..||...... .....+......
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~------~~~~~~~~~~~~ 264 (327)
T 2yfx_A 191 RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ------EVLEFVTSGGRM 264 (327)
T ss_dssp HHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH------HHHHHHHTTCCC
T ss_pred cccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHH------HHHHHHhcCCCC
Confidence 643221 22345778999999998899999999999999999998 99999754311 111111111110
Q ss_pred cccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhccC
Q 006677 563 AEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 615 (635)
Q Consensus 563 ~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~~~~ 615 (635)
. ........+.+++.+||+.||++||++.|++++|+.+....
T Consensus 265 -~----------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~ 306 (327)
T 2yfx_A 265 -D----------PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 306 (327)
T ss_dssp -C----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred -C----------CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcCH
Confidence 0 00112245677888999999999999999999999987654
No 198
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=2e-37 Score=317.48 Aligned_cols=240 Identities=24% Similarity=0.374 Sum_probs=197.0
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeeccc--CChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEeccCC
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVV--VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASG 419 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g 419 (635)
.+.||+|+||.||+|... +++.||+|++.... ...+.+.+|+.++.++ +||||+++++++...+..++||||++++
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 105 (303)
T 3a7i_A 27 LEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQC-DSPYVTKYYGSYLKDTKLWIIMEYLGGG 105 (303)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEEECCTTE
T ss_pred hhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhC-CCCCEeEEEEEEecCCeEEEEEEeCCCC
Confidence 467999999999999864 57889999997653 2357789999999999 9999999999999999999999999999
Q ss_pred ChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCC----
Q 006677 420 SLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP---- 495 (635)
Q Consensus 420 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~---- 495 (635)
+|.+++.. ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 106 ~L~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 176 (303)
T 3a7i_A 106 SALDLLEP------GPLDETQIATILREILKGLDYLHSEK---KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR 176 (303)
T ss_dssp EHHHHHTT------SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCCB
T ss_pred cHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCChheEEECCCCCEEEeecccceecCcccccc
Confidence 99999963 24899999999999999999999998 999999999999999999999999998765432
Q ss_pred CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcccC
Q 006677 496 ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQN 575 (635)
Q Consensus 496 ~~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 575 (635)
....+++.|+|||++.+..++.++||||||+++|||++|+.||...... ..... ........ . ..
T Consensus 177 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------~~~~~-~~~~~~~~-~------~~- 241 (303)
T 3a7i_A 177 NTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPM------KVLFL-IPKNNPPT-L------EG- 241 (303)
T ss_dssp CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH------HHHHH-HHHSCCCC-C------CS-
T ss_pred CccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHH------HHHHH-hhcCCCCC-C------cc-
Confidence 2345788899999999999999999999999999999999999754211 11111 11111100 0 01
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 006677 576 IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIE 609 (635)
Q Consensus 576 ~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~ 609 (635)
.....+.+++.+||+.||++|||+.|++++..
T Consensus 242 --~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~ 273 (303)
T 3a7i_A 242 --NYSKPLKEFVEACLNKEPSFRPTAKELLKHKF 273 (303)
T ss_dssp --SCCHHHHHHHHHHCCSSGGGSCCHHHHTTCHH
T ss_pred --ccCHHHHHHHHHHcCCChhhCcCHHHHhhChh
Confidence 11234677888999999999999999998643
No 199
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.3e-37 Score=325.15 Aligned_cols=250 Identities=21% Similarity=0.330 Sum_probs=191.0
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccCC------hHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEe
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG------KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDY 415 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~------~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~ 415 (635)
.+.||+|+||.||+|... +++.||+|++...... .+.+.+|++++.++ +||||+++++++...+..++||||
T Consensus 15 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~ 93 (346)
T 1ua2_A 15 LDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQEL-SHPNIIGLLDAFGHKSNISLVFDF 93 (346)
T ss_dssp EEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHC-CCTTBCCEEEEECCTTCCEEEEEC
T ss_pred EeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhC-CCCCCCeEEEEEeeCCceEEEEEc
Confidence 568999999999999975 4789999998754221 24678899999999 899999999999999999999999
Q ss_pred ccCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCC
Q 006677 416 FASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP 495 (635)
Q Consensus 416 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~ 495 (635)
+++ +|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 94 ~~~-~l~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~ 165 (346)
T 1ua2_A 94 MET-DLEVIIKDNS----LVLTPSHIKAYMLMTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSP 165 (346)
T ss_dssp CSE-EHHHHHTTCC----SSCCSSHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECCCGGGSTTTSC
T ss_pred CCC-CHHHHHHhcC----cCCCHHHHHHHHHHHHHHHHHHHHCC---EECCCCCHHHEEEcCCCCEEEEecccceeccCC
Confidence 986 8988886432 34888999999999999999999998 999999999999999999999999999876432
Q ss_pred C----CCCCCCcccCcccccCC-CCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhh-------hcccc
Q 006677 496 A----TPSRSAGYRAPEVIETR-KHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVR-------EEWTA 563 (635)
Q Consensus 496 ~----~~~~~~~y~aPE~~~~~-~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~-------~~~~~ 563 (635)
. ...+|+.|+|||++.+. .++.++|||||||++|||++|..||.+.... .....+.. +.|..
T Consensus 166 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~------~~~~~i~~~~~~~~~~~~~~ 239 (346)
T 1ua2_A 166 NRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDL------DQLTRIFETLGTPTEEQWPD 239 (346)
T ss_dssp CCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHHHCCCCTTTSSS
T ss_pred cccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHH------HHHHHHHHHcCCCChhhhhh
Confidence 2 34578899999999754 5889999999999999999999999754321 11111111 01110
Q ss_pred ccchhhh---hcccC------hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006677 564 EVFDVEL---MRFQN------IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 564 ~~~d~~~---~~~~~------~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 607 (635)
....... ...+. .......+.+++.+|++.||++|||++|++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 240 MCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp TTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred hccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 0000000 00000 01122467788889999999999999999985
No 200
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=7.5e-38 Score=319.14 Aligned_cols=243 Identities=24% Similarity=0.300 Sum_probs=191.9
Q ss_pred ccccccCceEEEEEEec-CCCeEEEEEeecccC-ChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEeccCCCh
Q 006677 344 EVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV-GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSL 421 (635)
Q Consensus 344 ~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 421 (635)
.+||+|+||.||+|... ++..||+|++..... ..+.+.+|+.++..+ +||||+++++++...+..++||||+++++|
T Consensus 28 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 106 (295)
T 2clq_A 28 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHL-KHKNIVQYLGSFSENGFIKIFMEQVPGGSL 106 (295)
T ss_dssp CEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTC-CCTTBCCEEEEEEETTEEEEEEECCSEEEH
T ss_pred EEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhC-CCCCEeeEeeEEEeCCcEEEEEEeCCCCCH
Confidence 47999999999999964 578899999876533 356788999999999 999999999999999999999999999999
Q ss_pred hhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcC-CCCeEEeecCCCCCCCCC----C
Q 006677 422 STLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQ-DLDGCISDFGLTPLMNVP----A 496 (635)
Q Consensus 422 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~-~~~~ki~DfGla~~~~~~----~ 496 (635)
.+++..... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++. ++.+||+|||++...... .
T Consensus 107 ~~~l~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~ 181 (295)
T 2clq_A 107 SALLRSKWG--PLKDNEQTIGFYTKQILEGLKYLHDNQ---IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTE 181 (295)
T ss_dssp HHHHHHTTC--CCTTCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTCCEEECCTTTCEESCC-----C
T ss_pred HHHHHhhcc--CCCccHHHHHHHHHHHHHHHHHHHhCC---EEccCCChhhEEEECCCCCEEEeecccccccCCCCCccc
Confidence 999975432 234778999999999999999999998 999999999999987 899999999999765432 2
Q ss_pred CCCCCCcccCcccccCCC--CCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhccc
Q 006677 497 TPSRSAGYRAPEVIETRK--HSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQ 574 (635)
Q Consensus 497 ~~~~~~~y~aPE~~~~~~--~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 574 (635)
...+++.|+|||++.+.. ++.++||||||+++|||++|+.||......+ ..............
T Consensus 182 ~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-----~~~~~~~~~~~~~~---------- 246 (295)
T 2clq_A 182 TFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQ-----AAMFKVGMFKVHPE---------- 246 (295)
T ss_dssp CCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHH-----HHHHHHHHHCCCCC----------
T ss_pred ccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchh-----HHHHhhcccccccc----------
Confidence 345788999999997643 7899999999999999999999996432111 00000000000000
Q ss_pred ChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006677 575 NIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 575 ~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 607 (635)
........+.+++.+||+.||++||++.|++++
T Consensus 247 ~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~ 279 (295)
T 2clq_A 247 IPESMSAEAKAFILKCFEPDPDKRACANDLLVD 279 (295)
T ss_dssp CCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTS
T ss_pred ccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 011123456678889999999999999999863
No 201
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=3.7e-37 Score=318.48 Aligned_cols=241 Identities=23% Similarity=0.357 Sum_probs=187.4
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccC---------ChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEE
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV---------GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLV 412 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~---------~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv 412 (635)
.+.||+|+||.||+|... +++.||||++..... ....+.+|++++.++ +||||+++++++..++ .++|
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~-~~lv 92 (322)
T 2ycf_A 15 SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKL-NHPCIIKIKNFFDAED-YYIV 92 (322)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHC-CCTTBCCEEEEEESSS-EEEE
T ss_pred eeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhC-CCCCCceEeeEEcCCc-eEEE
Confidence 578999999999999975 468899999865421 123588999999999 9999999999987654 8999
Q ss_pred EEeccCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCC---eEEeecCCC
Q 006677 413 YDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLD---GCISDFGLT 489 (635)
Q Consensus 413 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~---~ki~DfGla 489 (635)
|||+++|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+||+++.++. +||+|||++
T Consensus 93 ~e~~~~~~L~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~ 164 (322)
T 2ycf_A 93 LELMEGGELFDKVVGN-----KRLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHS 164 (322)
T ss_dssp EECCTTEETHHHHSTT-----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSSSCCEEECCCTTC
T ss_pred EecCCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEecCCCCCeEEEccCccc
Confidence 9999999999998643 34899999999999999999999998 999999999999987664 999999999
Q ss_pred CCCCCCC---CCCCCCcccCccccc---CCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcccc
Q 006677 490 PLMNVPA---TPSRSAGYRAPEVIE---TRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTA 563 (635)
Q Consensus 490 ~~~~~~~---~~~~~~~y~aPE~~~---~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 563 (635)
....... ...+++.|+|||++. ...++.++|||||||++|||++|..||....... .+...+. .....
T Consensus 165 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~~~~~----~~~~~ 238 (322)
T 2ycf_A 165 KILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV--SLKDQIT----SGKYN 238 (322)
T ss_dssp EECCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSS--CHHHHHH----HTCCC
T ss_pred eecccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHH--HHHHHHH----hCccc
Confidence 8765432 224788999999973 5678999999999999999999999997544322 2211111 11000
Q ss_pred ccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006677 564 EVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVR 606 (635)
Q Consensus 564 ~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 606 (635)
. .+.. . ......+.+++.+||+.||++||+++|+++
T Consensus 239 -~-~~~~--~---~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 239 -F-IPEV--W---AEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp -C-CHHH--H---TTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred -c-Cchh--h---hhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 0 0000 0 112345678888999999999999999985
No 202
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=2.8e-37 Score=339.11 Aligned_cols=241 Identities=21% Similarity=0.342 Sum_probs=192.3
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeeccc--------------CChHHHHHHHHHHHhhcCCCceeceeEEEEeCC
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVV--------------VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKD 407 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~--------------~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~ 407 (635)
.++||+|+||+||+|... +++.||+|++.... ...+.+.+|++++.++ +||||+++++++.+..
T Consensus 41 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~ 119 (504)
T 3q5i_A 41 VRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL-DHPNIIKLFDVFEDKK 119 (504)
T ss_dssp EEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTC-CCTTBCCEEEEEECSS
T ss_pred EeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEcCC
Confidence 468999999999999976 46889999997643 2245788999999999 8999999999999999
Q ss_pred eeEEEEEeccCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCC---CeEEe
Q 006677 408 EKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDL---DGCIS 484 (635)
Q Consensus 408 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~---~~ki~ 484 (635)
..++||||+++|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++ .+||+
T Consensus 120 ~~~lv~e~~~gg~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~ 191 (504)
T 3q5i_A 120 YFYLVTEFYEGGELFEQIINR-----HKFDECDAANIMKQILSGICYLHKHN---IVHRDIKPENILLENKNSLLNIKIV 191 (504)
T ss_dssp EEEEEEECCTTCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESSTTCCSSEEEC
T ss_pred EEEEEEecCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCcHHHEEEecCCCCccEEEE
Confidence 999999999999999998643 24899999999999999999999998 99999999999998776 69999
Q ss_pred ecCCCCCCCCC---CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcc
Q 006677 485 DFGLTPLMNVP---ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEW 561 (635)
Q Consensus 485 DfGla~~~~~~---~~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 561 (635)
|||++...... ....+|+.|+|||++.+ .++.++||||+||++|+|++|..||.+.... .....+.....
T Consensus 192 Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~------~~~~~i~~~~~ 264 (504)
T 3q5i_A 192 DFGLSSFFSKDYKLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPFGGQNDQ------DIIKKVEKGKY 264 (504)
T ss_dssp CCTTCEECCTTSCBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHCCC
T ss_pred ECCCCEEcCCCCccccccCCcCCCCHHHhcc-CCCchHHHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHcCCC
Confidence 99999766543 24468999999999874 6999999999999999999999999864321 22222222211
Q ss_pred ccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006677 562 TAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 562 ~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 607 (635)
.. + ...... ....+.+++.+|++.||.+|||++|++++
T Consensus 265 ~~---~--~~~~~~---~s~~~~~li~~~L~~dp~~R~t~~e~l~h 302 (504)
T 3q5i_A 265 YF---D--FNDWKN---ISDEAKELIKLMLTYDYNKRCTAEEALNS 302 (504)
T ss_dssp CC---C--HHHHTT---SCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred CC---C--ccccCC---CCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 10 0 001111 12356778889999999999999999984
No 203
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=9.8e-38 Score=341.29 Aligned_cols=241 Identities=23% Similarity=0.379 Sum_probs=196.3
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeeccc----CChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEecc
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVV----VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 417 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 417 (635)
.++||+|+||+||+|... +++.||||++.... .....+.+|++++.++ +||||+++++++...+..++||||+.
T Consensus 31 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lv~e~~~ 109 (484)
T 3nyv_A 31 QRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL-DHPNIMKLYEFFEDKGYFYLVGEVYT 109 (484)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred eeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhC-CCCCCCcEEEEEEeCCEEEEEEecCC
Confidence 578999999999999976 68899999997542 2456789999999999 99999999999999999999999999
Q ss_pred CCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEE---cCCCCeEEeecCCCCCCCC
Q 006677 418 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLI---NQDLDGCISDFGLTPLMNV 494 (635)
Q Consensus 418 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll---~~~~~~ki~DfGla~~~~~ 494 (635)
+|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||+ +.++.+||+|||+++....
T Consensus 110 ~~~L~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 181 (484)
T 3nyv_A 110 GGELFDEIISR-----KRFSEVDAARIIRQVLSGITYMHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA 181 (484)
T ss_dssp SCBHHHHHHTC-----SCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCC
T ss_pred CCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccc
Confidence 99999998743 34899999999999999999999998 9999999999999 5678999999999876654
Q ss_pred CC---CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhh
Q 006677 495 PA---TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELM 571 (635)
Q Consensus 495 ~~---~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 571 (635)
.. ...+|+.|+|||++.+ .++.++||||+||++|||++|..||...... .....+....+... ..
T Consensus 182 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~------~~~~~i~~~~~~~~-----~~ 249 (484)
T 3nyv_A 182 SKKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEY------DILKKVEKGKYTFE-----LP 249 (484)
T ss_dssp CCSHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHCCCCCC-----SG
T ss_pred ccccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHH------HHHHHHHcCCCCCC-----Cc
Confidence 33 2357899999999876 6999999999999999999999999864321 12222222221111 00
Q ss_pred cccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006677 572 RFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 572 ~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 607 (635)
... .....+.+++.+||+.+|++|||+.|++++
T Consensus 250 ~~~---~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 282 (484)
T 3nyv_A 250 QWK---KVSESAKDLIRKMLTYVPSMRISARDALDH 282 (484)
T ss_dssp GGG---GSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ccc---cCCHHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence 111 122356677889999999999999999984
No 204
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=3.4e-37 Score=311.20 Aligned_cols=238 Identities=21% Similarity=0.337 Sum_probs=188.7
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeeccc----CChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEecc
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVV----VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 417 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 417 (635)
.+.||+|+||.||+|... +++.||+|++.... ...+.+.+|++++.++ +||||+++++++...+..++||||++
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~ 94 (276)
T 2h6d_A 16 GDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLF-RHPHIIKLYQVISTPTDFFMVMEYVS 94 (276)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred EeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcC-CCCCEeEEEEEEecCCeEEEEEeccC
Confidence 468999999999999976 68899999987542 2345788999999999 89999999999999999999999999
Q ss_pred CCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCCC-
Q 006677 418 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA- 496 (635)
Q Consensus 418 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~~- 496 (635)
+++|.+++... ..+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||++.......
T Consensus 95 ~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~ 166 (276)
T 2h6d_A 95 GGELFDYICKH-----GRVEEMEARRLFQQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF 166 (276)
T ss_dssp SCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHHC---SSCCCCCGGGEEECTTSCEEECCCCGGGCCCC---
T ss_pred CCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCChhhEEECCCCCEEEeecccccccCCCcc
Confidence 99999999643 24899999999999999999999998 9999999999999999999999999987765432
Q ss_pred --CCCCCCcccCcccccCCCC-CCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcc
Q 006677 497 --TPSRSAGYRAPEVIETRKH-SHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRF 573 (635)
Q Consensus 497 --~~~~~~~y~aPE~~~~~~~-~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 573 (635)
...+++.|+|||.+.+..+ +.++||||||+++|||++|+.||.... .......+......
T Consensus 167 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~------~~~~~~~~~~~~~~----------- 229 (276)
T 2h6d_A 167 LRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEH------VPTLFKKIRGGVFY----------- 229 (276)
T ss_dssp ----------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHCCCC-----------
T ss_pred eecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCc------HHHHHHHhhcCccc-----------
Confidence 3357888999999988765 689999999999999999999997532 11112221111100
Q ss_pred cChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006677 574 QNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 574 ~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 607 (635)
........+.+++.+|++.||++|||++|++++
T Consensus 230 -~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 230 -IPEYLNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp -CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred -CchhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 001112356778889999999999999999984
No 205
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=4.6e-37 Score=330.70 Aligned_cols=187 Identities=26% Similarity=0.398 Sum_probs=159.2
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccCC---hHHHHHHHHHHHhhcCCCceeceeEEEEeC-----CeeEEEE
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSK-----DEKLLVY 413 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~-----~~~~lv~ 413 (635)
.+.||+|+||.||+|... +++.||||++...... .+.+.+|+++++++ +||||+++++++... ...|+||
T Consensus 31 ~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~~~~~~lv~ 109 (432)
T 3n9x_A 31 KHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRL-KSDYIIRLYDLIIPDDLLKFDELYIVL 109 (432)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHC-CCTTBCCEEEECCCSCTTTCCCEEEEE
T ss_pred EEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHc-CCCCcceEEEEEecCCCCcCCeEEEEE
Confidence 468999999999999975 4678999999765332 45788999999999 899999999999776 5689999
Q ss_pred EeccCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCC
Q 006677 414 DYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN 493 (635)
Q Consensus 414 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~ 493 (635)
||++ |+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 110 e~~~-~~L~~~~~~~-----~~l~~~~~~~i~~qil~aL~~LH~~g---ivHrDlkp~NILl~~~~~~kL~DFGla~~~~ 180 (432)
T 3n9x_A 110 EIAD-SDLKKLFKTP-----IFLTEEHIKTILYNLLLGENFIHESG---IIHRDLKPANCLLNQDCSVKVCDFGLARTIN 180 (432)
T ss_dssp ECCS-EEHHHHHHSS-----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEEC-
T ss_pred ecCC-cCHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---CCCCCCCHHHeEECCCCCEEEccCCCccccc
Confidence 9986 5999999743 34899999999999999999999998 9999999999999999999999999997654
Q ss_pred CC--------------------------CCCCCCCcccCcccc-cCCCCCCccchhhHHHHHHHHHhCCCCCC
Q 006677 494 VP--------------------------ATPSRSAGYRAPEVI-ETRKHSHKSDVYSFGVLLLEMLTGKAPLQ 539 (635)
Q Consensus 494 ~~--------------------------~~~~~~~~y~aPE~~-~~~~~~~k~Dvws~Gvvl~el~tg~~p~~ 539 (635)
.. ....+|+.|+|||++ ....++.++|||||||++|||++|..||.
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 181 SEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp ------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred ccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 32 234578899999986 56679999999999999999998655554
No 206
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=2.7e-37 Score=324.89 Aligned_cols=250 Identities=21% Similarity=0.319 Sum_probs=185.8
Q ss_pred hccccccCceEEEEEEecCCCeEEEEEeecccCC------------hHHHHHHHHHHHhhcCCCceeceeEEEEeCC---
Q 006677 343 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVG------------KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKD--- 407 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~------------~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~--- 407 (635)
.+.||+|+||.||+|...++..||||++...... .+.+.+|++++.++ +||||+++++++...+
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~ 105 (362)
T 3pg1_A 27 QRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHF-HHPNILGLRDIFVHFEEPA 105 (362)
T ss_dssp EEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHC-CCTTBCCCSEEEEECCTTT
T ss_pred eEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhC-CCcCccceeeeEEeccCCC
Confidence 4689999999999999888999999998654321 26788999999999 8999999999986533
Q ss_pred --eeEEEEEeccCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEee
Q 006677 408 --EKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISD 485 (635)
Q Consensus 408 --~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~D 485 (635)
..++||||++ |+|.+++... ...+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|
T Consensus 106 ~~~~~lv~e~~~-~~l~~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~D 177 (362)
T 3pg1_A 106 MHKLYLVTELMR-TDLAQVIHDQ----RIVISPQHIQYFMYHILLGLHVLHEAG---VVHRDLHPGNILLADNNDITICD 177 (362)
T ss_dssp CCEEEEEEECCS-EEHHHHHHCT----TSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECC
T ss_pred cceEEEEEccCC-CCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHHCc---CEecCCChHHEEEcCCCCEEEEe
Confidence 5799999998 5888888743 235899999999999999999999998 99999999999999999999999
Q ss_pred cCCCCCCCCCC---CCCCCCcccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcc
Q 006677 486 FGLTPLMNVPA---TPSRSAGYRAPEVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEW 561 (635)
Q Consensus 486 fGla~~~~~~~---~~~~~~~y~aPE~~~~-~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 561 (635)
||++....... ...+++.|+|||++.+ ..++.++|||||||++|||++|+.||......+ ....+.....
T Consensus 178 fg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~------~~~~i~~~~~ 251 (362)
T 3pg1_A 178 FNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYN------QLNKIVEVVG 251 (362)
T ss_dssp TTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH------HHHHHHHHHC
T ss_pred cCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHH------HHHHHHHHcC
Confidence 99997544322 3357888999999877 678999999999999999999999997643211 1111111000
Q ss_pred ccc--------------cchhhhhccc------ChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006677 562 TAE--------------VFDVELMRFQ------NIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 562 ~~~--------------~~d~~~~~~~------~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 607 (635)
... .......... ........+.+++.+|++.||++|||+.|++++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 317 (362)
T 3pg1_A 252 TPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH 317 (362)
T ss_dssp CCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred CCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence 000 0000000000 001112457788889999999999999999983
No 207
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=1.2e-37 Score=323.96 Aligned_cols=238 Identities=21% Similarity=0.348 Sum_probs=194.9
Q ss_pred hccccccCceEEEEEEecC-CCeEEEEEeecccC----ChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEecc
Q 006677 343 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVVV----GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 417 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~~----~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 417 (635)
.+.||+|+||.||++...+ ++.||+|++..... ..+.+.+|+.+++++ +|+||+++++++.+.+..++||||++
T Consensus 46 ~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~ 124 (335)
T 2owb_A 46 GRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-AHQHVVGFHGFFEDNDFVFVVLELCR 124 (335)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEecCCeEEEEEecCC
Confidence 4689999999999999764 67899999876532 245678899999999 99999999999999999999999999
Q ss_pred CCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCC--
Q 006677 418 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP-- 495 (635)
Q Consensus 418 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~-- 495 (635)
+++|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 125 ~~~L~~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 196 (335)
T 2owb_A 125 RRSLLELHKRR-----KALTEPEARYYLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE 196 (335)
T ss_dssp TCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCCTTCEECCSTTC
T ss_pred CCCHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---CEecCCCchhEEEcCCCCEEEeeccCceecccCcc
Confidence 99999998642 24899999999999999999999998 999999999999999999999999999765422
Q ss_pred --CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcc
Q 006677 496 --ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRF 573 (635)
Q Consensus 496 --~~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 573 (635)
....+++.|+|||++.+..++.++||||||+++|||++|+.||..... ......+...... ..
T Consensus 197 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------~~~~~~~~~~~~~---------~~ 261 (335)
T 2owb_A 197 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL------KETYLRIKKNEYS---------IP 261 (335)
T ss_dssp CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSH------HHHHHHHHHTCCC---------CC
T ss_pred cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCH------HHHHHHHhcCCCC---------CC
Confidence 234578899999999998999999999999999999999999975331 1111111111110 00
Q ss_pred cChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006677 574 QNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 574 ~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 607 (635)
. .....+.+++.+||+.||++|||++|++++
T Consensus 262 ~---~~~~~~~~li~~~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 262 K---HINPVAASLIQKMLQTDPTARPTINELLND 292 (335)
T ss_dssp T---TSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred c---cCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 1 112346678889999999999999999984
No 208
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=1.7e-37 Score=328.86 Aligned_cols=195 Identities=22% Similarity=0.299 Sum_probs=165.5
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccCChHHHHHHHHHHHhhcCCC-----ceeceeEEEEeCCeeEEEEEec
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHP-----NVVPLRAYYYSKDEKLLVYDYF 416 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~-----niv~l~~~~~~~~~~~lv~e~~ 416 (635)
.+.||+|+||+||+|... +++.||||+++.......++..|+.++..+.+|+ +|+++++++...+..++||||+
T Consensus 59 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~ 138 (382)
T 2vx3_A 59 DSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEML 138 (382)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEEEEEEECC
T ss_pred EEEEeecCCEEEEEEEEcCCCcEEEEEEEeccHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCceEEEEecC
Confidence 468999999999999976 4678999999765444567778888888885566 4999999999999999999999
Q ss_pred cCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEc--CCCCeEEeecCCCCCCCC
Q 006677 417 ASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLIN--QDLDGCISDFGLTPLMNV 494 (635)
Q Consensus 417 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~--~~~~~ki~DfGla~~~~~ 494 (635)
+ |+|.+++.... ...+++..+..++.|++.||+|||.+. ..|+||||||+|||++ .++.+||+|||+++....
T Consensus 139 ~-~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~al~~lH~~~-~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~~~~ 213 (382)
T 2vx3_A 139 S-YNLYDLLRNTN---FRGVSLNLTRKFAQQMCTALLFLATPE-LSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ 213 (382)
T ss_dssp C-CBHHHHHHHTT---TSCCCHHHHHHHHHHHHHHHHHHTSTT-TCEECCCCSGGGEEESSTTSCCEEECCCTTCEETTC
T ss_pred C-CCHHHHHhhcC---cCCCCHHHHHHHHHHHHHHHHHhccCC-CCEEcCCCCcccEEEecCCCCcEEEEeccCceeccc
Confidence 6 59999997543 234899999999999999999999521 2399999999999995 478899999999977654
Q ss_pred C-CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCC
Q 006677 495 P-ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPT 542 (635)
Q Consensus 495 ~-~~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~ 542 (635)
. ....+|+.|+|||++.+..++.++|||||||++|||+||+.||....
T Consensus 214 ~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~ 262 (382)
T 2vx3_A 214 RIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGAN 262 (382)
T ss_dssp CCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred ccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 3 34567899999999999999999999999999999999999998653
No 209
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=3e-37 Score=338.03 Aligned_cols=245 Identities=21% Similarity=0.351 Sum_probs=192.6
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeeccc---CChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEeccC
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVV---VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS 418 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~ 418 (635)
.+.||+|+||+||+|... ++..||+|++.... .....+.+|+++++++ +||||+++++++.+....++||||+++
T Consensus 42 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lv~e~~~~ 120 (494)
T 3lij_A 42 VKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLL-DHPNIMKLYDFFEDKRNYYLVMECYKG 120 (494)
T ss_dssp EEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEEEECCCS
T ss_pred eeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhC-CCCCCCeEEEEEEeCCEEEEEEecCCC
Confidence 578999999999999976 57889999997653 2356788999999999 999999999999999999999999999
Q ss_pred CChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCC---CCeEEeecCCCCCCCCC
Q 006677 419 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQD---LDGCISDFGLTPLMNVP 495 (635)
Q Consensus 419 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~---~~~ki~DfGla~~~~~~ 495 (635)
|+|.+.+... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.+ +.+||+|||++......
T Consensus 121 g~L~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~ 192 (494)
T 3lij_A 121 GELFDEIIHR-----MKFNEVDAAVIIKQVLSGVTYLHKHN---IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQ 192 (494)
T ss_dssp CBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTT
T ss_pred CcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCC
Confidence 9999988643 34899999999999999999999998 9999999999999764 55999999999765433
Q ss_pred ---CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhc
Q 006677 496 ---ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMR 572 (635)
Q Consensus 496 ---~~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 572 (635)
....+|+.|+|||++. ..++.++||||+||++|||++|..||..... ......+........ .+ .
T Consensus 193 ~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~------~~~~~~i~~~~~~~~--~~---~ 260 (494)
T 3lij_A 193 KKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTD------QEILRKVEKGKYTFD--SP---E 260 (494)
T ss_dssp BCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHTCCCCC--SG---G
T ss_pred ccccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHhCCCCCC--ch---h
Confidence 2345899999999986 4699999999999999999999999976432 122222222221110 00 1
Q ss_pred ccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HHHh
Q 006677 573 FQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM--IEEV 611 (635)
Q Consensus 573 ~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~--L~~~ 611 (635)
... ....+.+++.+||+.||++|||+.|++++ +.++
T Consensus 261 ~~~---~s~~~~~li~~~L~~dp~~R~s~~e~l~hp~~~~~ 298 (494)
T 3lij_A 261 WKN---VSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEM 298 (494)
T ss_dssp GTT---SCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHHH
T ss_pred ccc---CCHHHHHHHHHHCCCChhhCccHHHHhcCcccccC
Confidence 111 22346677889999999999999999973 5544
No 210
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=2.7e-37 Score=316.28 Aligned_cols=241 Identities=21% Similarity=0.330 Sum_probs=189.5
Q ss_pred hccccccCceEEEEEEecC-CCeEEEEEeeccc-CChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEeccCCC
Q 006677 343 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVV-VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGS 420 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~-~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 420 (635)
.+.||+|+||.||+|.... +..||+|++.... ...+.+.+|++++.++ +||||+++++++..++..++||||+++++
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 102 (302)
T 2j7t_A 24 VGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATC-DHPYIVKLLGAYYHDGKLWIMIEFCPGGA 102 (302)
T ss_dssp EEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHC-CCTTBCCEEEEEECC-CEEEEEECCTTEE
T ss_pred cceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcC-CCCCEeeeeeeeeeCCeEEEEEEeCCCCc
Confidence 4679999999999999864 7889999987553 3457889999999999 99999999999999999999999999999
Q ss_pred hhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCC----CCC
Q 006677 421 LSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN----VPA 496 (635)
Q Consensus 421 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~----~~~ 496 (635)
|.+++.... ..+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||++.... ...
T Consensus 103 l~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 175 (302)
T 2j7t_A 103 VDAIMLELD----RGLTEPQIQVVCRQMLEALNFLHSKR---IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRD 175 (302)
T ss_dssp HHHHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHHC--
T ss_pred HHHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHHHEEECCCCCEEEEECCCCccccccccccc
Confidence 999886432 34899999999999999999999998 9999999999999999999999999864321 123
Q ss_pred CCCCCCcccCcccc-----cCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhh
Q 006677 497 TPSRSAGYRAPEVI-----ETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELM 571 (635)
Q Consensus 497 ~~~~~~~y~aPE~~-----~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 571 (635)
...+++.|+|||++ ....++.++||||||+++|||++|+.||..... ................
T Consensus 176 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~~~~~~~~~~~~~~~------ 243 (302)
T 2j7t_A 176 SFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP------MRVLLKIAKSDPPTLL------ 243 (302)
T ss_dssp ---CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCH------HHHHHHHHHSCCCCCS------
T ss_pred cccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCH------HHHHHHHhccCCcccC------
Confidence 34578899999998 466789999999999999999999999975431 1122222211111000
Q ss_pred cccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006677 572 RFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVR 606 (635)
Q Consensus 572 ~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 606 (635)
........+.+++.+||+.||++|||+.|+++
T Consensus 244 ---~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 244 ---TPSKWSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp ---SGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred ---CccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 01112345677888999999999999999976
No 211
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=1.7e-37 Score=315.74 Aligned_cols=244 Identities=22% Similarity=0.320 Sum_probs=176.6
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccCC--hHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEeccCC
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG--KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASG 419 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~--~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g 419 (635)
.+.||+|+||+||+|... +++.||+|+++..... ..+...|...+.+..+||||+++++++...+..++||||+++
T Consensus 12 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~- 90 (290)
T 3fme_A 12 IMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDT- 90 (290)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEEECCSE-
T ss_pred HHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEEehhcc-
Confidence 468999999999999974 6788999999765332 223333444433434999999999999999999999999974
Q ss_pred ChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCCC--
Q 006677 420 SLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSM-GGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA-- 496 (635)
Q Consensus 420 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~~-- 496 (635)
+|.+++..... ....+++..+..++.|++.||+|||++ + |+||||||+||+++.++.+||+|||++.......
T Consensus 91 ~l~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 166 (290)
T 3fme_A 91 SLDKFYKQVID-KGQTIPEDILGKIAVSIVKALEHLHSKLS---VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAK 166 (290)
T ss_dssp EHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHHHSC---CCCCCCSGGGCEECTTCCEEBCCC------------
T ss_pred chHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCCCEEEeecCCcccccccccc
Confidence 88877754221 124599999999999999999999998 8 9999999999999999999999999997664432
Q ss_pred -CCCCCCcccCcccc----cCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhh
Q 006677 497 -TPSRSAGYRAPEVI----ETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELM 571 (635)
Q Consensus 497 -~~~~~~~y~aPE~~----~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 571 (635)
...+++.|+|||++ .+..++.++||||||+++|||++|+.||..... ................ .
T Consensus 167 ~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~-~----- 235 (290)
T 3fme_A 167 DIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGT-----PFQQLKQVVEEPSPQL-P----- 235 (290)
T ss_dssp ---CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSC-----HHHHHHHHHHSCCCCC-C-----
T ss_pred cccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCc-----hHHHHHHHhccCCCCc-c-----
Confidence 23578899999996 566789999999999999999999999974321 1111122221111100 0
Q ss_pred cccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006677 572 RFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVR 606 (635)
Q Consensus 572 ~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 606 (635)
.......+.+++.+|++.||++|||++|+++
T Consensus 236 ----~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 236 ----ADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp ----TTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred ----cccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 0112345677888999999999999999998
No 212
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=1.5e-37 Score=323.43 Aligned_cols=245 Identities=19% Similarity=0.279 Sum_probs=168.0
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccCChHHHHHHHHHHHhhcCCCceeceeEEEEe----CCeeEEEEEecc
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYS----KDEKLLVYDYFA 417 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~----~~~~~lv~e~~~ 417 (635)
.++||+|+||+||+|... +++.||+|++... ....+|+..+.+..+||||+++++++.. ....++||||++
T Consensus 34 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~ 109 (336)
T 3fhr_A 34 KQVLGLGVNGKVLECFHRRTGQKCALKLLYDS----PKARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECME 109 (336)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEESS----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCT
T ss_pred ceeeeeCCCeEEEEEEECCCCCEEEEEEecCc----HHHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEEEeccC
Confidence 457999999999999976 5889999998653 3344455554445599999999999976 445799999999
Q ss_pred CCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcC---CCCeEEeecCCCCCCCC
Q 006677 418 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQ---DLDGCISDFGLTPLMNV 494 (635)
Q Consensus 418 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~---~~~~ki~DfGla~~~~~ 494 (635)
+|+|.+++.... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++. ++.+||+|||++.....
T Consensus 110 gg~L~~~l~~~~---~~~l~~~~~~~i~~ql~~~l~~LH~~~---ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~ 183 (336)
T 3fhr_A 110 GGELFSRIQERG---DQAFTEREAAEIMRDIGTAIQFLHSHN---IAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQ 183 (336)
T ss_dssp TEEHHHHHHTC----CCCCBHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSTTCCEEECCCTTCEEC--
T ss_pred CCCHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEEecCCCceEEEeccccceeccc
Confidence 999999997543 235999999999999999999999998 999999999999986 45599999999976543
Q ss_pred C--CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhc
Q 006677 495 P--ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMR 572 (635)
Q Consensus 495 ~--~~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 572 (635)
. ....+++.|+|||++.+..++.++||||||+++|||++|+.||........... .......... .. .
T Consensus 184 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~--~~~~~~~~~~-----~~---~ 253 (336)
T 3fhr_A 184 NALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPG--MKRRIRLGQY-----GF---P 253 (336)
T ss_dssp --------------------CHHHHHHHHHHHHHHHHHHHHSSCCC----------------------------CC---C
T ss_pred cccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhh--HHHhhhcccc-----cc---C
Confidence 3 234578899999999888899999999999999999999999976543322100 0000000000 00 0
Q ss_pred ccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006677 573 FQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 573 ~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 607 (635)
..........+.+++.+||+.||++|||++|++++
T Consensus 254 ~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 288 (336)
T 3fhr_A 254 NPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNH 288 (336)
T ss_dssp TTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred chhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 00011223456778889999999999999999983
No 213
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=3.5e-37 Score=314.88 Aligned_cols=250 Identities=23% Similarity=0.345 Sum_probs=190.8
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccC---ChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEeccC
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV---GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS 418 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~ 418 (635)
.+.||+|+||+||+|... +++.||+|++..... ..+.+.+|++++.++ +||||+++++++..++..++||||+.
T Consensus 8 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~- 85 (299)
T 2r3i_A 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-NHPNIVKLLDVIHTENKLYLVFEFLH- 85 (299)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTC-CCTTBCCEEEEEEETTEEEEEEECCS-
T ss_pred hhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHc-CCCCeeeEEEEEecCCceEEEEEccc-
Confidence 467999999999999976 588999999875432 236788999999999 89999999999999999999999997
Q ss_pred CChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCC---
Q 006677 419 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP--- 495 (635)
Q Consensus 419 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~--- 495 (635)
|+|.+++.... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 86 ~~L~~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~ 159 (299)
T 2r3i_A 86 QDLKKFMDASA---LTGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 159 (299)
T ss_dssp EEHHHHHHHTT---TTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCSBC
T ss_pred CCHHHHHHhhh---ccCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHeEEcCCCCEEECcchhhhhccCCccc
Confidence 59999987543 234889999999999999999999998 999999999999999999999999988654322
Q ss_pred -CCCCCCCcccCcccccCCC-CCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhh-cccccc-------
Q 006677 496 -ATPSRSAGYRAPEVIETRK-HSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVRE-EWTAEV------- 565 (635)
Q Consensus 496 -~~~~~~~~y~aPE~~~~~~-~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~------- 565 (635)
....+++.|+|||++.+.. ++.++||||||+++|||++|+.||......+ ....+... ......
T Consensus 160 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~ 233 (299)
T 2r3i_A 160 YTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID------QLFRIFRTLGTPDEVVWPGVTS 233 (299)
T ss_dssp TTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH------HHHHHHHHHCCCCTTTSTTGGG
T ss_pred cCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHH------HHHHHHHHhCCCchhhhhHhhc
Confidence 2335688999999998765 7999999999999999999999997643211 11111110 000000
Q ss_pred ---chhhhhc--ccCh----HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006677 566 ---FDVELMR--FQNI----EEEMVQMLQIGMACVAKVPDMRPNMDEVVR 606 (635)
Q Consensus 566 ---~d~~~~~--~~~~----~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 606 (635)
+...... .... ......+.+++.+|++.||++|||+.|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 234 MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp STTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CcccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 0000000 0000 112245677888999999999999999987
No 214
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=8.3e-38 Score=324.36 Aligned_cols=248 Identities=21% Similarity=0.328 Sum_probs=184.4
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccCC---hHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEeccC
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS 418 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~ 418 (635)
.+.||+|+||+||+|... +++.||+|+++..... .+.+.+|++++.++ +||||+++++++...+..++||||+++
T Consensus 39 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~ 117 (329)
T 3gbz_A 39 ITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKEL-QHRNIIELKSVIHHNHRLHLIFEYAEN 117 (329)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGC-CCTTBCCEEEEEEETTEEEEEEECCSE
T ss_pred EEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHc-CCCCcceEEEEEecCCEEEEEEecCCC
Confidence 468999999999999865 5788999999754332 34577899999999 999999999999999999999999985
Q ss_pred CChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEc-----CCCCeEEeecCCCCCCC
Q 006677 419 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLIN-----QDLDGCISDFGLTPLMN 493 (635)
Q Consensus 419 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~-----~~~~~ki~DfGla~~~~ 493 (635)
+|.+++.... .+++..+..++.||+.||+|||+.+ |+||||||+|||++ .++.+||+|||++....
T Consensus 118 -~L~~~~~~~~-----~~~~~~~~~i~~ql~~~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~ 188 (329)
T 3gbz_A 118 -DLKKYMDKNP-----DVSMRVIKSFLYQLINGVNFCHSRR---CLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFG 188 (329)
T ss_dssp -EHHHHHHHCT-----TCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC
T ss_pred -CHHHHHhhcC-----CCCHHHHHHHHHHHHHHHHHHHhCC---EECCCCCHHHEEEecCCCCccceEEECcCCCccccC
Confidence 9999997532 4899999999999999999999998 99999999999994 45569999999986554
Q ss_pred CC----CCCCCCCcccCcccccCC-CCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhh-------cc
Q 006677 494 VP----ATPSRSAGYRAPEVIETR-KHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVRE-------EW 561 (635)
Q Consensus 494 ~~----~~~~~~~~y~aPE~~~~~-~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~-------~~ 561 (635)
.. ....+|+.|+|||++.+. .++.++|||||||++|||++|+.||......+ ....+... .+
T Consensus 189 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~------~~~~~~~~~~~~~~~~~ 262 (329)
T 3gbz_A 189 IPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEID------QLFKIFEVLGLPDDTTW 262 (329)
T ss_dssp -----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHHHCCCCTTTS
T ss_pred CcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHH------HHHHHHHHhCCCchhhh
Confidence 22 233468899999999875 48999999999999999999999997543211 11111110 00
Q ss_pred cccc----chhhhh--cccChHH-----HHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006677 562 TAEV----FDVELM--RFQNIEE-----EMVQMLQIGMACVAKVPDMRPNMDEVVR 606 (635)
Q Consensus 562 ~~~~----~d~~~~--~~~~~~~-----~~~~l~~l~~~cl~~~P~~RPs~~evl~ 606 (635)
.... ...... ....... ....+.+++.+||+.||++|||++|+++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 263 PGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp TTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 0000 000000 0000000 1245678888999999999999999987
No 215
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=9.8e-38 Score=315.70 Aligned_cols=249 Identities=20% Similarity=0.307 Sum_probs=193.9
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccCC---hHHHHHHHHHHHhhcCCCceeceeEEEEe--CCeeEEEEEec
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYS--KDEKLLVYDYF 416 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~--~~~~~lv~e~~ 416 (635)
.+.||+|+||+||+|... +++.||+|++...... .+.+.+|++++.++ +||||+++++++.. ....++||||+
T Consensus 11 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~~lv~e~~ 89 (279)
T 2w5a_A 11 LYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLREL-KHPNIVRYYDRIIDRTNTTLYIVMEYC 89 (279)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEEGGGTEEEEEEECC
T ss_pred ehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhc-CCCCCCeEEEEEecCCCceEEEEEeCC
Confidence 467999999999999975 5788999999765432 35688899999999 89999999998865 56789999999
Q ss_pred cCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC--CCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCC
Q 006677 417 ASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMG--GPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV 494 (635)
Q Consensus 417 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~--~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~ 494 (635)
++|+|.+++..... ....+++..+..++.|++.||+|||+.+ ..+|+||||||+||+++.++.+||+|||++.....
T Consensus 90 ~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~~~~ 168 (279)
T 2w5a_A 90 EGGDLASVITKGTK-ERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNH 168 (279)
T ss_dssp TTEEHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHHHC--
T ss_pred CCCCHHHHHHhhcc-cCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchheeecc
Confidence 99999999975332 2344899999999999999999999976 23499999999999999999999999999876543
Q ss_pred CC----CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhh
Q 006677 495 PA----TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVEL 570 (635)
Q Consensus 495 ~~----~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 570 (635)
.. ...+++.|+|||++.+..++.++||||||+++|||++|+.||..... ......+.... ....
T Consensus 169 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~~~~~i~~~~-~~~~----- 236 (279)
T 2w5a_A 169 DTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ------KELAGKIREGK-FRRI----- 236 (279)
T ss_dssp -CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHTC-CCCC-----
T ss_pred ccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCH------HHHHHHHhhcc-cccC-----
Confidence 32 12468889999999998999999999999999999999999975431 11112211111 1100
Q ss_pred hcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHH
Q 006677 571 MRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEE 610 (635)
Q Consensus 571 ~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~ 610 (635)
.......+.+++.+||+.||++||++.|+++++..
T Consensus 237 -----~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~ 271 (279)
T 2w5a_A 237 -----PYRYSDELNEIITRMLNLKDYHRPSVEEILENPLI 271 (279)
T ss_dssp -----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred -----CcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhh
Confidence 01122456778889999999999999999987653
No 216
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=5.2e-37 Score=323.76 Aligned_cols=247 Identities=21% Similarity=0.324 Sum_probs=184.9
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccCC---hHHHHHHHHHHHhhcCCCceeceeEEEEeCC------eeEEE
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKD------EKLLV 412 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~------~~~lv 412 (635)
.+.||+|+||.||+|... +++.||||++...... .+.+.+|+.+++.+ +||||+++++++...+ ..++|
T Consensus 30 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~~~~~~~lv 108 (371)
T 2xrw_A 30 LKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCV-NHKNIIGLLNVFTPQKSLEEFQDVYIV 108 (371)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHC-CCTTBCCEEEEECSCCSTTTCCEEEEE
T ss_pred eeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhc-CCCCccceEEeeccccccccccceEEE
Confidence 467999999999999865 5788999999765333 35678899999999 9999999999997665 67999
Q ss_pred EEeccCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCC
Q 006677 413 YDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM 492 (635)
Q Consensus 413 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~ 492 (635)
|||+++ +|.+++.. .+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 109 ~e~~~~-~l~~~~~~-------~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~ 177 (371)
T 2xrw_A 109 MELMDA-NLCQVIQM-------ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA 177 (371)
T ss_dssp EECCSE-EHHHHHHS-------CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCCCC----
T ss_pred EEcCCC-CHHHHHhh-------ccCHHHHHHHHHHHHHHHHHHHHCC---eecccCCHHHEEEcCCCCEEEEEeeccccc
Confidence 999975 78888752 3889999999999999999999998 999999999999999999999999999876
Q ss_pred CCC---CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhh----------
Q 006677 493 NVP---ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVRE---------- 559 (635)
Q Consensus 493 ~~~---~~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~---------- 559 (635)
... ....+|+.|+|||++.+..++.++|||||||++|||++|+.||.+.+..+ ....+...
T Consensus 178 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~------~~~~i~~~~~~~~~~~~~ 251 (371)
T 2xrw_A 178 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHID------QWNKVIEQLGTPCPEFMK 251 (371)
T ss_dssp ------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHC-CCCCCHHHHT
T ss_pred ccccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHHHHhCCCCHHHHH
Confidence 543 23457889999999999999999999999999999999999998643211 11111100
Q ss_pred ------------c--cccccchhhhhc--cc----ChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006677 560 ------------E--WTAEVFDVELMR--FQ----NIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 560 ------------~--~~~~~~d~~~~~--~~----~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 607 (635)
. +....+...... .+ ........+.+++.+|++.||++|||++|++++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 319 (371)
T 2xrw_A 252 KLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 319 (371)
T ss_dssp TSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred HhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence 0 000000000000 00 012234568889999999999999999999983
No 217
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=1.3e-37 Score=335.13 Aligned_cols=245 Identities=23% Similarity=0.363 Sum_probs=184.0
Q ss_pred hccccccCceEEEEEEecCCCeEEEEEeecccCChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEeccCCChh
Q 006677 343 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLS 422 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~ 422 (635)
.++||+|+||+||.+...+|+.||||++.... .+.+.+|++++.++.+||||+++++++.+++..++||||++ |+|.
T Consensus 20 ~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~--~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-gsL~ 96 (434)
T 2rio_A 20 EKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF--CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-LNLQ 96 (434)
T ss_dssp EEEEEECSTTCEEEEEESSSSEEEEEEEEGGG--HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-EEHH
T ss_pred cCeEeeCCCeEEEEEEEECCeEEEEEEEcHHH--HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-CCHH
Confidence 46799999999987777779999999986532 45678899999887789999999999999999999999996 6999
Q ss_pred hhccCCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCC-------------CCeEEeecC
Q 006677 423 TLLHGNRGAGR--TPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQD-------------LDGCISDFG 487 (635)
Q Consensus 423 ~~l~~~~~~~~--~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~-------------~~~ki~DfG 487 (635)
+++........ ...++..+..++.||+.||+|||+.+ |+||||||+|||++.+ +.+||+|||
T Consensus 97 ~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG 173 (434)
T 2rio_A 97 DLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG 173 (434)
T ss_dssp HHHHTC------------CCHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCT
T ss_pred HHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEecCcccccccccCCCceEEEEcccc
Confidence 99975432111 11133456789999999999999998 9999999999999754 489999999
Q ss_pred CCCCCCCCC--------CCCCCCcccCcccccC-------CCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhH
Q 006677 488 LTPLMNVPA--------TPSRSAGYRAPEVIET-------RKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPR 551 (635)
Q Consensus 488 la~~~~~~~--------~~~~~~~y~aPE~~~~-------~~~~~k~Dvws~Gvvl~el~t-g~~p~~~~~~~~~~~~~~ 551 (635)
+++...... ...+|+.|+|||++.+ ..++.++|||||||++|||+| |..||......+
T Consensus 174 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~------ 247 (434)
T 2rio_A 174 LCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE------ 247 (434)
T ss_dssp TCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH------
T ss_pred cceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH------
Confidence 998765422 2357899999999975 568999999999999999999 999997432111
Q ss_pred HHHHHhhhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006677 552 WVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVR 606 (635)
Q Consensus 552 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 606 (635)
..+.......... ...........+.+++.+||+.||++|||+.|+++
T Consensus 248 --~~i~~~~~~~~~~-----~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 248 --SNIIRGIFSLDEM-----KCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp --HHHHHTCCCCCCC-----TTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred --HHHhcCCCCcccc-----cccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 1111111110000 01112344567788889999999999999999986
No 218
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=6.3e-37 Score=312.88 Aligned_cols=242 Identities=19% Similarity=0.354 Sum_probs=194.1
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccC----------ChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEE
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV----------GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLL 411 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~----------~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~l 411 (635)
.+.||+|+||.||+|... +++.||+|++..... ..+.+.+|++++.++.+||||+++++++...+..++
T Consensus 22 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~l 101 (298)
T 1phk_A 22 KEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFL 101 (298)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred eeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccCCeEEE
Confidence 467999999999999975 578899999875431 134577899999999669999999999999999999
Q ss_pred EEEeccCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCC
Q 006677 412 VYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPL 491 (635)
Q Consensus 412 v~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~ 491 (635)
||||+++++|.+++... ..+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||++..
T Consensus 102 v~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~ 173 (298)
T 1phk_A 102 VFDLMKKGELFDYLTEK-----VTLSEKETRKIMRALLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTDFGFSCQ 173 (298)
T ss_dssp EEECCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred EEeccCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEEcCCCcEEEecccchhh
Confidence 99999999999999742 34899999999999999999999998 99999999999999999999999999876
Q ss_pred CCCCC---CCCCCCcccCccccc------CCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccc
Q 006677 492 MNVPA---TPSRSAGYRAPEVIE------TRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWT 562 (635)
Q Consensus 492 ~~~~~---~~~~~~~y~aPE~~~------~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (635)
..... ...+++.|+|||++. ...++.++||||||+++|||++|..||..... ......+......
T Consensus 174 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~------~~~~~~~~~~~~~ 247 (298)
T 1phk_A 174 LDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQ------MLMLRMIMSGNYQ 247 (298)
T ss_dssp CCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHTCCC
T ss_pred cCCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccH------HHHHHHHhcCCcc
Confidence 54332 345788999999985 45688999999999999999999999975431 1122222222111
Q ss_pred cccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006677 563 AEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVR 606 (635)
Q Consensus 563 ~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 606 (635)
.. . +........+.+++.+||+.||++|||+.|+++
T Consensus 248 ~~--~------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 248 FG--S------PEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp CC--T------TTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred cC--c------ccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 00 0 001122345778888999999999999999986
No 219
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=3.9e-37 Score=323.83 Aligned_cols=251 Identities=20% Similarity=0.298 Sum_probs=174.9
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccCC---hHHHHHHHHHHHhhcCCCceeceeEEEEeC------CeeEEE
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSK------DEKLLV 412 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~------~~~~lv 412 (635)
.+.||+|+||.||+|... +++.||||++...... .+.+.+|+++++.+ +||||+++++++... ...++|
T Consensus 34 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~~~~~~~lv 112 (367)
T 2fst_X 34 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-KHENVIGLLDVFTPARSLEEFNDVYLV 112 (367)
T ss_dssp EEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHC-CCTTBCCCSEEECSCSSGGGCCCCEEE
T ss_pred eeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEecCCccccCCeEEEE
Confidence 468999999999999864 5788999999764332 45678899999999 899999999998754 567999
Q ss_pred EEeccCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCC
Q 006677 413 YDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM 492 (635)
Q Consensus 413 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~ 492 (635)
+||+ +++|.+++.. ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 113 ~e~~-~~~L~~~~~~------~~l~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~ 182 (367)
T 2fst_X 113 THLM-GADLNNIVKC------QKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHT 182 (367)
T ss_dssp EECC-CEECC-----------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECC-------
T ss_pred eccc-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHhhEEECCCCCEEEeeccccccc
Confidence 9999 6799998863 24999999999999999999999998 999999999999999999999999999876
Q ss_pred CCC-CCCCCCCcccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhc---cccccch
Q 006677 493 NVP-ATPSRSAGYRAPEVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREE---WTAEVFD 567 (635)
Q Consensus 493 ~~~-~~~~~~~~y~aPE~~~~-~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~d 567 (635)
... ....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||.+.+..+ ....+....... ....+..
T Consensus 183 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~---~l~~i~~~~g~p~~~~~~~~~~ 259 (367)
T 2fst_X 183 ADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID---QLKLILRLVGTPGAELLKKISS 259 (367)
T ss_dssp --------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHHHHHHCSCCHHHHTTCCC
T ss_pred cccCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHHhCCCCHHHHHHhhh
Confidence 543 23467899999999877 678999999999999999999999997643211 111111111000 0000000
Q ss_pred h-------hhhc--ccChH----HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006677 568 V-------ELMR--FQNIE----EEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 568 ~-------~~~~--~~~~~----~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 607 (635)
. .+.. ..... .....+.+++.+|++.||++|||+.|++++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 260 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp HHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 0 0000 00000 112356788889999999999999999984
No 220
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=2.4e-37 Score=323.26 Aligned_cols=252 Identities=16% Similarity=0.253 Sum_probs=196.2
Q ss_pred hccccccCceEEEEEEecCCCeEEEEEeecccCCh------------------HHHHHHHHHHHhhcCCCceeceeEEEE
Q 006677 343 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGK------------------RDFEQQMEIVGRVGQHPNVVPLRAYYY 404 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~------------------~~~~~e~~~l~~l~~h~niv~l~~~~~ 404 (635)
.+.||+|+||.||+|.. +++.||+|++....... +.+.+|++++.++ +||||+++++++.
T Consensus 36 ~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~ 113 (348)
T 2pml_X 36 IRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDI-KNEYCLTCEGIIT 113 (348)
T ss_dssp EEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTC-CCTTBCCCSEEEE
T ss_pred EEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhC-CCCCcceEEEEEe
Confidence 46799999999999999 79999999997543211 7899999999999 8999999999999
Q ss_pred eCCeeEEEEEeccCCChhhh------ccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCceecCCCCCCeEEcC
Q 006677 405 SKDEKLLVYDYFASGSLSTL------LHGNRGAGRTPLDWETRVKILLGTARGVAHIHS-MGGPKFTHGNIKASNVLINQ 477 (635)
Q Consensus 405 ~~~~~~lv~e~~~~g~L~~~------l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~-~~~~~ivH~Dlk~~NIll~~ 477 (635)
..+..++||||+++|+|.++ +... ....+++..+..++.|++.||+|||+ .+ |+||||||+||+++.
T Consensus 114 ~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~~~---i~H~dl~p~Nil~~~ 187 (348)
T 2pml_X 114 NYDEVYIIYEYMENDSILKFDEYFFVLDKN---YTCFIPIQVIKCIIKSVLNSFSYIHNEKN---ICHRDVKPSNILMDK 187 (348)
T ss_dssp SSSEEEEEEECCTTCBSSEESSSEESSCSS---SCCCCCHHHHHHHHHHHHHHHHHHHHTSC---EECCCCCGGGEEECT
T ss_pred eCCeEEEEEeccCCCcHHHHHHHhhhhhhc---cccCCCHHHHHHHHHHHHHHHHHHhccCC---EeecCCChHhEEEcC
Confidence 99999999999999999999 5432 13459999999999999999999999 87 999999999999999
Q ss_pred CCCeEEeecCCCCCCCCC--CCCCCCCcccCcccccCC-CCCC-ccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHH
Q 006677 478 DLDGCISDFGLTPLMNVP--ATPSRSAGYRAPEVIETR-KHSH-KSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWV 553 (635)
Q Consensus 478 ~~~~ki~DfGla~~~~~~--~~~~~~~~y~aPE~~~~~-~~~~-k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~ 553 (635)
++.+||+|||++...... ....++..|+|||++.+. .++. ++||||||+++|||++|..||...... ....
T Consensus 188 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-----~~~~ 262 (348)
T 2pml_X 188 NGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL-----VELF 262 (348)
T ss_dssp TSCEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS-----HHHH
T ss_pred CCcEEEeccccccccccccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH-----HHHH
Confidence 999999999999765332 344578899999999887 5666 999999999999999999999854321 1122
Q ss_pred HHHhhhcccccc----chhhhhc---ccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006677 554 QSVVREEWTAEV----FDVELMR---FQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 554 ~~~~~~~~~~~~----~d~~~~~---~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 607 (635)
..+......... +...... ..........+.+++.+||+.||++|||++|++++
T Consensus 263 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~h 323 (348)
T 2pml_X 263 NNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKH 323 (348)
T ss_dssp HHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred HHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 222211110000 0000000 00001223456788889999999999999999873
No 221
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=8.6e-38 Score=322.54 Aligned_cols=247 Identities=19% Similarity=0.322 Sum_probs=189.4
Q ss_pred hccccccCceEEEEEEecCCCeEEEEEeecccC---ChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEeccCC
Q 006677 343 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVV---GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASG 419 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~---~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g 419 (635)
.+.||+|+||.||+|...+ .+|+|+++.... ..+.+.+|+.++.++ +||||+++++++...+..++||||++++
T Consensus 38 ~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~iv~e~~~~~ 114 (319)
T 2y4i_B 38 GELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQT-RHENVVLFMGACMSPPHLAIITSLCKGR 114 (319)
T ss_dssp CCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTC-CCTTBCCCCEEEECSSCEEEECBCCCSE
T ss_pred eeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcC-CCCCEeEEEEEEecCCceEEEeecccCC
Confidence 4689999999999999763 599999875432 235677899999999 9999999999999999999999999999
Q ss_pred ChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCC----
Q 006677 420 SLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP---- 495 (635)
Q Consensus 420 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~---- 495 (635)
+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++ ++.+||+|||++......
T Consensus 115 ~L~~~l~~~~----~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~~ 186 (319)
T 2y4i_B 115 TLYSVVRDAK----IVLDVNKTRQIAQEIVKGMGYLHAKG---ILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGR 186 (319)
T ss_dssp EHHHHTTSSC----CCCCSHHHHHHHHHHHHHHHHHHHTT---CCCCCCCSTTEEEC---CCEECCCSCCC---------
T ss_pred cHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCChhhEEEe-CCCEEEeecCCccccccccccc
Confidence 9999997532 34899999999999999999999998 99999999999998 689999999998654321
Q ss_pred -----CCCCCCCcccCcccccC---------CCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcc
Q 006677 496 -----ATPSRSAGYRAPEVIET---------RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEW 561 (635)
Q Consensus 496 -----~~~~~~~~y~aPE~~~~---------~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 561 (635)
....+++.|+|||++.+ ..++.++||||||+++|||++|+.||...... ....... ...
T Consensus 187 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~------~~~~~~~-~~~ 259 (319)
T 2y4i_B 187 REDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAE------AIIWQMG-TGM 259 (319)
T ss_dssp -CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHH------HHHHHHH-TTC
T ss_pred cccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHhc-cCC
Confidence 12236778999999864 35788999999999999999999999754321 1111111 111
Q ss_pred ccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhccCC
Q 006677 562 TAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDS 616 (635)
Q Consensus 562 ~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~~~~~ 616 (635)
...... . .....+.+++.+||+.+|++|||+.|+++.|+++.....
T Consensus 260 ~~~~~~------~---~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~~ 305 (319)
T 2y4i_B 260 KPNLSQ------I---GMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRNR 305 (319)
T ss_dssp CCCCCC------S---SCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC-----
T ss_pred CCCCCc------C---CCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhhc
Confidence 111100 0 112346678889999999999999999999999886643
No 222
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=2.7e-37 Score=328.39 Aligned_cols=258 Identities=24% Similarity=0.368 Sum_probs=188.9
Q ss_pred hccccccCceEEEEEEecCCCeEEEEEeecccCChHHHHHHHHHHHhhcCCCceeceeEEEEeCCe------eEEEEEec
Q 006677 343 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDE------KLLVYDYF 416 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~------~~lv~e~~ 416 (635)
.++||+|+||+||+|...++..||+|++.... ....+|+++++.+ +||||+++++++..... .++||||+
T Consensus 45 ~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~---~~~~~E~~il~~l-~h~niv~l~~~~~~~~~~~~~~~~~lv~e~~ 120 (394)
T 4e7w_A 45 CKVIGNGSFGVVFQAKLVESDEVAIKKVLQDK---RFKNRELQIMRIV-KHPNVVDLKAFFYSNGDKKDEVFLNLVLEYV 120 (394)
T ss_dssp EEEEEEETTEEEEEEEETTTEEEEEEEEECCT---TSCCHHHHHHHTC-CCTTBCCEEEEEEEESSSSSCEEEEEEEECC
T ss_pred eEEEeeCCCeEEEEEEECCCCeEEEEEEecCc---chHHHHHHHHHhC-CCCCcceEEEEEEecCCCCCceEEEEEeecc
Confidence 46899999999999999888889999886542 2234689999999 99999999999976543 78999999
Q ss_pred cCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEc-CCCCeEEeecCCCCCCCCC
Q 006677 417 ASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLIN-QDLDGCISDFGLTPLMNVP 495 (635)
Q Consensus 417 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~-~~~~~ki~DfGla~~~~~~ 495 (635)
+++.+....+... ....+++..+..++.||+.||+|||+.+ |+||||||+|||++ .++.+||+|||+++.....
T Consensus 121 ~~~l~~~~~~~~~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~ 195 (394)
T 4e7w_A 121 PETVYRASRHYAK--LKQTMPMLLIKLYMYQLLRSLAYIHSIG---ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAG 195 (394)
T ss_dssp SEEHHHHHHHHHH--TTSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEETTTTEEEECCCTTCEECCTT
T ss_pred CccHHHHHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHEEEcCCCCcEEEeeCCCcccccCC
Confidence 8754433322111 1235899999999999999999999998 99999999999999 7999999999999765432
Q ss_pred ---CCCCCCCcccCcccccCC-CCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHH----------hhhcc
Q 006677 496 ---ATPSRSAGYRAPEVIETR-KHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSV----------VREEW 561 (635)
Q Consensus 496 ---~~~~~~~~y~aPE~~~~~-~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~----------~~~~~ 561 (635)
....+|+.|+|||++.+. .++.++|||||||++|||++|+.||.+....+. +....... ....+
T Consensus 196 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~--l~~i~~~~g~p~~~~~~~~~~~~ 273 (394)
T 4e7w_A 196 EPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQ--LVEIIKVLGTPSREQIKTMNPNY 273 (394)
T ss_dssp CCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHHHHCCCCHHHHHHHCGGG
T ss_pred CCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHHhCCCCHHHHHhhChhh
Confidence 234578889999998765 589999999999999999999999986532211 11111100 00000
Q ss_pred ccccchhhhhcccCh-----HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HHHhhc
Q 006677 562 TAEVFDVELMRFQNI-----EEEMVQMLQIGMACVAKVPDMRPNMDEVVRM--IEEVRQ 613 (635)
Q Consensus 562 ~~~~~d~~~~~~~~~-----~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~--L~~~~~ 613 (635)
....+.. . ..... ......+.+++.+||+.||++|||+.|++++ ++++..
T Consensus 274 ~~~~~~~-~-~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~ 330 (394)
T 4e7w_A 274 MEHKFPQ-I-RPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDELRT 330 (394)
T ss_dssp SSSCCCC-C-CCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTTTS
T ss_pred hhhcccc-c-cCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhhcc
Confidence 0000000 0 00000 1122467788889999999999999999984 555543
No 223
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=3.6e-37 Score=347.16 Aligned_cols=246 Identities=22% Similarity=0.354 Sum_probs=196.9
Q ss_pred hccccccCceEEEEEEecC----CCeEEEEEeecccC--ChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEec
Q 006677 343 AEVLGKGSYGTAYKAVLEE----STTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYF 416 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~~----~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~ 416 (635)
.+.||+|+||+||+|.+.. +..||+|+++.... ..+.+.+|+.++.++ +||||+++++++. ++..++||||+
T Consensus 395 ~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~-~~~~~lv~E~~ 472 (656)
T 2j0j_A 395 GRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQF-DHPHIVKLIGVIT-ENPVWIIMELC 472 (656)
T ss_dssp EEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEC-SSSCEEEEECC
T ss_pred eeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEe-cCceEEEEEcC
Confidence 5789999999999999743 34689998865432 236788999999999 9999999999984 56789999999
Q ss_pred cCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCCC
Q 006677 417 ASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA 496 (635)
Q Consensus 417 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~~ 496 (635)
++|+|.++++... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 473 ~~g~L~~~l~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~ 545 (656)
T 2j0j_A 473 TLGELRSFLQVRK----FSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 545 (656)
T ss_dssp TTCBHHHHHHHTT----TTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCCCCCSCCC--
T ss_pred CCCcHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchHhEEEeCCCCEEEEecCCCeecCCCc
Confidence 9999999997432 34899999999999999999999998 9999999999999999999999999998765432
Q ss_pred C-----CCCCCcccCcccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhh
Q 006677 497 T-----PSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVEL 570 (635)
Q Consensus 497 ~-----~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 570 (635)
. ..+++.|+|||++.+..++.++|||||||++|||++ |..||.+.... .....+......
T Consensus 546 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~------~~~~~i~~~~~~-------- 611 (656)
T 2j0j_A 546 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN------DVIGRIENGERL-------- 611 (656)
T ss_dssp --------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH------HHHHHHHHTCCC--------
T ss_pred ceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHH------HHHHHHHcCCCC--------
Confidence 1 234568999999998899999999999999999997 99999754321 112222111110
Q ss_pred hcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhcc
Q 006677 571 MRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQS 614 (635)
Q Consensus 571 ~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~~~ 614 (635)
.........+.+++.+||+.||++|||+.|+++.|+++.+.
T Consensus 612 ---~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~ 652 (656)
T 2j0j_A 612 ---PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 652 (656)
T ss_dssp ---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ---CCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHH
Confidence 01112234567788899999999999999999999998754
No 224
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=9.3e-37 Score=320.38 Aligned_cols=263 Identities=21% Similarity=0.298 Sum_probs=182.8
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccCChHHHHHHHHHHHhhcCCCceeceeEEEEeCCe-------eEEEEE
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDE-------KLLVYD 414 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~-------~~lv~e 414 (635)
.+.||+|+||+||+|... +++.||||++.........+.++++.+..+ +||||+++++++..... .++|||
T Consensus 28 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~~~lv~e 106 (360)
T 3e3p_A 28 ERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVL-HHPNIVQLQSYFYTLGERDRRDIYLNVVME 106 (360)
T ss_dssp C----------CEEEEETTTCCEEEEEEEECCTTCCCHHHHHHHHHHHH-CCTTBCCEEEEEEEECSSCTTCEEEEEEEE
T ss_pred EEEEecCCCeEEEEEEECCCCCEEEEEEEecCccccHHHHHHHHHHHhc-CCCCcccHHHhhhccccccccceeEEEEee
Confidence 467999999999999975 578999999876655556677788888888 99999999999976543 789999
Q ss_pred eccCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH--hcCCCCceecCCCCCCeEEcC-CCCeEEeecCCCCC
Q 006677 415 YFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIH--SMGGPKFTHGNIKASNVLINQ-DLDGCISDFGLTPL 491 (635)
Q Consensus 415 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH--~~~~~~ivH~Dlk~~NIll~~-~~~~ki~DfGla~~ 491 (635)
|+++ +|.+.+..... ....+++..+..++.|++.||.||| +.+ |+||||||+|||++. ++.+||+|||+++.
T Consensus 107 ~~~~-~l~~~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~~~---ivH~Dlkp~NIll~~~~~~~kl~Dfg~a~~ 181 (360)
T 3e3p_A 107 YVPD-TLHRCCRNYYR-RQVAPPPILIKVFLFQLIRSIGCLHLPSVN---VCHRDIKPHNVLVNEADGTLKLCDFGSAKK 181 (360)
T ss_dssp CCSC-BHHHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHTSTTTC---CBCSCCCGGGEEEETTTTEEEECCCTTCBC
T ss_pred cccc-cHHHHHHHHhh-cccCCCHHHHHHHHHHHHHHHHHHhCCCCC---eecCcCCHHHEEEeCCCCcEEEeeCCCcee
Confidence 9987 54444332111 2335889999999999999999999 877 999999999999997 89999999999987
Q ss_pred CCCCC---CCCCCCcccCcccccCCC-CCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHH-----------H
Q 006677 492 MNVPA---TPSRSAGYRAPEVIETRK-HSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQS-----------V 556 (635)
Q Consensus 492 ~~~~~---~~~~~~~y~aPE~~~~~~-~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~-----------~ 556 (635)
..... ...+|+.|+|||++.+.. ++.++|||||||++|||++|+.||......+. +....+. .
T Consensus 182 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 259 (360)
T 3e3p_A 182 LSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQ--LHEIVRVLGCPSREVLRKL 259 (360)
T ss_dssp CCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHHHHCCCCHHHHHHH
T ss_pred cCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHH--HHHHHHHcCCCCHHHHHhc
Confidence 65433 345788899999986654 89999999999999999999999986432211 1111110 0
Q ss_pred hhhccccccchhh---h--hcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HHHhhc
Q 006677 557 VREEWTAEVFDVE---L--MRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM--IEEVRQ 613 (635)
Q Consensus 557 ~~~~~~~~~~d~~---~--~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~--L~~~~~ 613 (635)
..........+.. + ............+.+++.+||+.||++|||+.|++++ ++++..
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~ 323 (360)
T 3e3p_A 260 NPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELHD 323 (360)
T ss_dssp CTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGGGC
T ss_pred ccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCccccccCC
Confidence 0000000000000 0 0000001134567888889999999999999999984 555543
No 225
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=5.4e-38 Score=321.39 Aligned_cols=253 Identities=24% Similarity=0.383 Sum_probs=178.3
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeeccc--CChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEeccCC
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVV--VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASG 419 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g 419 (635)
.+.||+|+||.||+|... +++.||+|++.... ...+++.+|++++.++ +||||+++++++...+..++||||+++|
T Consensus 20 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 98 (303)
T 2vwi_A 20 QEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQC-HHPNIVSYYTSFVVKDELWLVMKLLSGG 98 (303)
T ss_dssp EEECC---CCCEEEEEC----CEEEEECCC----------------CCCCC-CCTTBCCEEEEEESSSCEEEEEECCTTC
T ss_pred hheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhc-CCCCEeeEEEEEeecCCcEEEehhccCC
Confidence 468999999999999864 57899999986542 2345678899998888 8999999999999999999999999999
Q ss_pred ChhhhccCCC---CCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCC-
Q 006677 420 SLSTLLHGNR---GAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP- 495 (635)
Q Consensus 420 ~L~~~l~~~~---~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~- 495 (635)
+|.+++.... ......+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 99 ~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 175 (303)
T 2vwi_A 99 SVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG---QIHRDVKAGNILLGEDGSVQIADFGVSAFLATGG 175 (303)
T ss_dssp BHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTCCEEECCCHHHHHCC---
T ss_pred chHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCC---CCCCCCChhhEEEcCCCCEEEEeccchheeccCC
Confidence 9999986421 112345899999999999999999999998 999999999999999999999999988654321
Q ss_pred --------CCCCCCCcccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccc
Q 006677 496 --------ATPSRSAGYRAPEVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVF 566 (635)
Q Consensus 496 --------~~~~~~~~y~aPE~~~~-~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 566 (635)
....+++.|+|||++.+ ..++.++||||||+++|||++|+.||......+ ........... ..
T Consensus 176 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~------~~~~~~~~~~~-~~- 247 (303)
T 2vwi_A 176 DITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMK------VLMLTLQNDPP-SL- 247 (303)
T ss_dssp ------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGG------HHHHHHTSSCC-CT-
T ss_pred CccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhh------HHHHHhccCCC-cc-
Confidence 12357888999999875 568999999999999999999999997643221 11111111100 00
Q ss_pred hhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006677 567 DVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 567 d~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 607 (635)
................+.+++.+||+.||++|||+.|++++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 288 (303)
T 2vwi_A 248 ETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRH 288 (303)
T ss_dssp TC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred ccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 00000000001122356778889999999999999999873
No 226
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=2.6e-37 Score=323.54 Aligned_cols=253 Identities=17% Similarity=0.286 Sum_probs=192.9
Q ss_pred hccccccCceEEEEEEecC-C-CeEEEEEeecccCChHHHHHHHHHHHhhcCCCc------eeceeEEEEeCCeeEEEEE
Q 006677 343 AEVLGKGSYGTAYKAVLEE-S-TTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPN------VVPLRAYYYSKDEKLLVYD 414 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~~-~-~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~n------iv~l~~~~~~~~~~~lv~e 414 (635)
.+.||+|+||+||+|.... + ..||+|+++......+.+.+|++++.++ +|++ ++.+.+++...+..++|||
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~~~~~~~~~~~~~~~~~~~~~~~~~lv~e 102 (355)
T 2eu9_A 24 VGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKI-KEKDKENKFLCVLMSDWFNFHGHMCIAFE 102 (355)
T ss_dssp EEEEEEETTEEEEEEEETTTTTEEEEEEEECSCHHHHHHHHHHHHHHHHH-HHHCTTSCSCBCCEEEEEEETTEEEEEEE
T ss_pred EEEeeccCCeEEEEEEecCCCceEEEEEEEcccccchhHHHHHHHHHHHH-hhcCCCCceeEEEeeeeeeeCCeEEEEEe
Confidence 4679999999999999753 3 5899999976544456788899999988 5544 9999999999999999999
Q ss_pred eccCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEE-------------------
Q 006677 415 YFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLI------------------- 475 (635)
Q Consensus 415 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll------------------- 475 (635)
|+ ++++.+++.... ...+++..+..++.||+.||+|||+.+ |+||||||+|||+
T Consensus 103 ~~-~~~l~~~l~~~~---~~~~~~~~~~~i~~qi~~~L~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~ 175 (355)
T 2eu9_A 103 LL-GKNTFEFLKENN---FQPYPLPHVRHMAYQLCHALRFLHENQ---LTHTDLKPENILFVNSEFETLYNEHKSCEEKS 175 (355)
T ss_dssp CC-CCBHHHHHHHTT---TCCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEESCCCEEEEECCC-CCCEEE
T ss_pred cc-CCChHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEecccccccccccccccccc
Confidence 99 567777765432 235899999999999999999999998 9999999999999
Q ss_pred cCCCCeEEeecCCCCCCCCC-CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHH
Q 006677 476 NQDLDGCISDFGLTPLMNVP-ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQ 554 (635)
Q Consensus 476 ~~~~~~ki~DfGla~~~~~~-~~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~ 554 (635)
+.++.+||+|||+++..... ....+|+.|+|||++.+..++.++|||||||++|||++|+.||......+. .....
T Consensus 176 ~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~---~~~~~ 252 (355)
T 2eu9_A 176 VKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREH---LVMME 252 (355)
T ss_dssp ESCCCEEECCCTTCEETTSCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH---HHHHH
T ss_pred cCCCcEEEeecCccccccccccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHH
Confidence 67889999999999765443 344688999999999999999999999999999999999999986432211 11111
Q ss_pred HHhhhc--------------------cccccchhh---------hhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHH
Q 006677 555 SVVREE--------------------WTAEVFDVE---------LMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVV 605 (635)
Q Consensus 555 ~~~~~~--------------------~~~~~~d~~---------~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl 605 (635)
...... |.....+.. .............+.+++.+||+.||++|||++|++
T Consensus 253 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l 332 (355)
T 2eu9_A 253 KILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEAL 332 (355)
T ss_dssp HHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHT
T ss_pred HHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHh
Confidence 111000 000000000 000011123345788899999999999999999998
Q ss_pred H
Q 006677 606 R 606 (635)
Q Consensus 606 ~ 606 (635)
+
T Consensus 333 ~ 333 (355)
T 2eu9_A 333 L 333 (355)
T ss_dssp T
T ss_pred c
Confidence 6
No 227
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=2.4e-37 Score=325.49 Aligned_cols=251 Identities=21% Similarity=0.304 Sum_probs=190.2
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccC--ChHHHHHHHHHHHhhcCCCceeceeEEEEeC-----CeeEEEEE
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSK-----DEKLLVYD 414 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~-----~~~~lv~e 414 (635)
.+.||+|+||.||+|... ++..||+|++..... ..+.+.+|++++.++ +||||+++++++... ...++|||
T Consensus 32 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~iv~e 110 (364)
T 3qyz_A 32 LSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRF-RHENIIGINDIIRAPTIEQMKDVYIVQD 110 (364)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHC-CCTTBCCCCEEECCSSTTTCCCEEEEEE
T ss_pred EEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhc-CCCCCccceeEEecCCccccceEEEEEc
Confidence 468999999999999965 577899999975432 235688999999999 899999999999765 36799999
Q ss_pred eccCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCC
Q 006677 415 YFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV 494 (635)
Q Consensus 415 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~ 494 (635)
|+. |+|.+++... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.....
T Consensus 111 ~~~-~~L~~~l~~~------~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~ 180 (364)
T 3qyz_A 111 LME-TDLYKLLKTQ------HLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADP 180 (364)
T ss_dssp CCS-EEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEECCG
T ss_pred ccC-cCHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCChHhEEECCCCCEEEEeCcceEecCC
Confidence 997 5999998642 3899999999999999999999998 99999999999999999999999999976543
Q ss_pred C-------CCCCCCCcccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccc---c
Q 006677 495 P-------ATPSRSAGYRAPEVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWT---A 563 (635)
Q Consensus 495 ~-------~~~~~~~~y~aPE~~~~-~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~---~ 563 (635)
. ....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||.+....+. ............. .
T Consensus 181 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~---~~~i~~~~~~~~~~~~~ 257 (364)
T 3qyz_A 181 DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ---LNHILGILGSPSQEDLN 257 (364)
T ss_dssp GGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGH---HHHHHHHHCSCCHHHHH
T ss_pred CCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHH---HHHHHHHhCCCCHHHHH
Confidence 2 23467889999998754 4589999999999999999999999986543321 1111111100000 0
Q ss_pred ccchh-------hhh--cccC----hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006677 564 EVFDV-------ELM--RFQN----IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 564 ~~~d~-------~~~--~~~~----~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 607 (635)
...+. ... .... .......+.+++.+|++.||++|||++|++++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 314 (364)
T 3qyz_A 258 CIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314 (364)
T ss_dssp TCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00000 000 0000 01112456788889999999999999999983
No 228
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=2.3e-37 Score=322.47 Aligned_cols=245 Identities=22% Similarity=0.326 Sum_probs=189.1
Q ss_pred hccccccCceEEEEEEe-cCCCeEEEEEeecccCC--hHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEeccCC
Q 006677 343 AEVLGKGSYGTAYKAVL-EESTTVVVKRLKEVVVG--KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASG 419 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~--~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g 419 (635)
.+.||+|+||+||+|.. .+++.||||++...... ..++..|..++.+..+||||+++++++...+..++||||+++
T Consensus 56 ~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~- 134 (340)
T 3an0_A 56 IMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDT- 134 (340)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEECCCSE-
T ss_pred eeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEHHHhhC-
Confidence 46799999999999996 46888999999765433 344556666644444999999999999999999999999975
Q ss_pred ChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCCC--
Q 006677 420 SLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSM-GGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA-- 496 (635)
Q Consensus 420 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~~-- 496 (635)
+|.+++..... ....+++..+..++.||+.||+|||+. + |+||||||+||+++.++.+||+|||+++......
T Consensus 135 ~L~~~l~~~~~-~~~~l~~~~~~~i~~qi~~~l~~lH~~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~ 210 (340)
T 3an0_A 135 SLDKFYKQVID-KGQTIPEDILGKIAVSIVKALEHLHSKLS---VIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAK 210 (340)
T ss_dssp EHHHHHHHHHH-TSCCCCHHHHHHHHHHHHHHHHHHHHHTC---CCCCSCCSTTEEECSTTCEEECCCSHHHHHSCHHHH
T ss_pred cHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCCCEEEeeCCCceeccccccc
Confidence 99888864211 123599999999999999999999987 7 9999999999999999999999999987654321
Q ss_pred -CCCCCCcccCccccc----CCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhh
Q 006677 497 -TPSRSAGYRAPEVIE----TRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELM 571 (635)
Q Consensus 497 -~~~~~~~y~aPE~~~----~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 571 (635)
...+++.|+|||++. ...++.++|||||||++|||+||+.||..... ............... ..
T Consensus 211 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~-----~~~~~~~~~~~~~~~-~~----- 279 (340)
T 3an0_A 211 TIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGT-----PFQQLKQVVEEPSPQ-LP----- 279 (340)
T ss_dssp HHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSC-----HHHHHHHHHHSCCCC-CC-----
T ss_pred ccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccc-----hHHHHHHHhcCCCCC-CC-----
Confidence 235888999999964 34688999999999999999999999975321 111122222111110 00
Q ss_pred cccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006677 572 RFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 572 ~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 607 (635)
.......+.+++.+||+.||++|||+.|++++
T Consensus 280 ----~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 311 (340)
T 3an0_A 280 ----ADKFSAEFVDFTSQCLKKNSKERPTYPELMQH 311 (340)
T ss_dssp ----GGGSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred ----cccCCHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 01123457788889999999999999999983
No 229
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=3.3e-37 Score=326.73 Aligned_cols=258 Identities=23% Similarity=0.338 Sum_probs=189.1
Q ss_pred hccccccCceEEEEEEe-cCCCeEEEEEeecccCChHHHHHHHHHHHhhcCCCceeceeEEEEeC---------------
Q 006677 343 AEVLGKGSYGTAYKAVL-EESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSK--------------- 406 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~--------------- 406 (635)
.+.||+|+||+||+|.. .+++.||+|++.... ....+|+++++.+ +||||+++++++...
T Consensus 12 ~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~---~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~ 87 (383)
T 3eb0_A 12 GKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP---RYKNRELDIMKVL-DHVNIIKLVDYFYTTGDEEPKPPQPPDDHN 87 (383)
T ss_dssp EEEEECC-CEEEEEEEETTTCCEEEEEEEECCT---TSCCHHHHHHTTC-CCTTBCCEEEEEEEC---------------
T ss_pred EEEEEeccCEEEEEEEECCCCCEEEEEEEecCc---chHHHHHHHHHHc-CCCCccchhheeeecCcccccccccccccc
Confidence 46899999999999986 468899999986542 2334789999999 999999999998543
Q ss_pred -----------------------CeeEEEEEeccCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCc
Q 006677 407 -----------------------DEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKF 463 (635)
Q Consensus 407 -----------------------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~i 463 (635)
...++||||++ |+|.+.+..... ....+++..+..++.||+.||+|||+.+ |
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~g---i 162 (383)
T 3eb0_A 88 KLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIR-SGRSIPMNLISIYIYQLFRAVGFIHSLG---I 162 (383)
T ss_dssp ----------------------CCEEEEEECCCS-EEHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHTTT---E
T ss_pred cccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCc---C
Confidence 23789999998 488777753221 1235999999999999999999999998 9
Q ss_pred eecCCCCCCeEEc-CCCCeEEeecCCCCCCCCC---CCCCCCCcccCcccccCC-CCCCccchhhHHHHHHHHHhCCCCC
Q 006677 464 THGNIKASNVLIN-QDLDGCISDFGLTPLMNVP---ATPSRSAGYRAPEVIETR-KHSHKSDVYSFGVLLLEMLTGKAPL 538 (635)
Q Consensus 464 vH~Dlk~~NIll~-~~~~~ki~DfGla~~~~~~---~~~~~~~~y~aPE~~~~~-~~~~k~Dvws~Gvvl~el~tg~~p~ 538 (635)
+||||||+||+++ .++.+||+|||+++..... ....+++.|+|||++.+. .++.++||||+||++|||++|+.||
T Consensus 163 ~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf 242 (383)
T 3eb0_A 163 CHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLF 242 (383)
T ss_dssp ECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred ccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCCC
Confidence 9999999999998 6899999999999765433 234578889999998765 4899999999999999999999999
Q ss_pred CCCCCCCCCChhHHHHHHhhhc-----------cccccc----hhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHH
Q 006677 539 QSPTRDDMVDLPRWVQSVVREE-----------WTAEVF----DVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDE 603 (635)
Q Consensus 539 ~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~----d~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~e 603 (635)
.+....+. +...+. ..... +....+ ...+. ..........+.+++.+||+.||++|||+.|
T Consensus 243 ~~~~~~~~--~~~i~~-~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e 318 (383)
T 3eb0_A 243 SGETSIDQ--LVRIIQ-IMGTPTKEQMIRMNPHYTEVRFPTLKAKDWR-KILPEGTPSLAIDLLEQILRYEPDLRINPYE 318 (383)
T ss_dssp CCSSHHHH--HHHHHH-HHCCCCHHHHHHHCTTC--CCCCCCCCCCHH-HHSCTTCCHHHHHHHHHHCCSSGGGSCCHHH
T ss_pred CCCChHHH--HHHHHH-HhCCCCHHHHHHhCcccccccCCccCcccHH-hhCCCCCCHHHHHHHHHHccCChhhCCCHHH
Confidence 86432211 111111 00000 000000 00000 0000112345778888999999999999999
Q ss_pred HHH--HHHHhhc
Q 006677 604 VVR--MIEEVRQ 613 (635)
Q Consensus 604 vl~--~L~~~~~ 613 (635)
+++ .++++..
T Consensus 319 ~l~hp~f~~~~~ 330 (383)
T 3eb0_A 319 AMAHPFFDHLRN 330 (383)
T ss_dssp HHTSGGGHHHHH
T ss_pred HhcCHHHHHHHh
Confidence 997 4666554
No 230
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=4.5e-37 Score=318.17 Aligned_cols=252 Identities=21% Similarity=0.311 Sum_probs=192.3
Q ss_pred hccccccCceEEEEEEe--cCCCeEEEEEeecccC---ChHHHHHHHHHHHhhc--CCCceeceeEEEE-----eCCeeE
Q 006677 343 AEVLGKGSYGTAYKAVL--EESTTVVVKRLKEVVV---GKRDFEQQMEIVGRVG--QHPNVVPLRAYYY-----SKDEKL 410 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~--~~~~~vavK~l~~~~~---~~~~~~~e~~~l~~l~--~h~niv~l~~~~~-----~~~~~~ 410 (635)
.+.||+|+||.||+|.. .+++.||+|++..... ....+.+|+.+++.+. +||||+++++++. .....+
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~ 95 (326)
T 1blx_A 16 VAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLT 95 (326)
T ss_dssp EEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEEEE
T ss_pred eeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCCCceEE
Confidence 46899999999999997 3578899999875432 2346778888877764 7999999999987 456789
Q ss_pred EEEEeccCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCC
Q 006677 411 LVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTP 490 (635)
Q Consensus 411 lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~ 490 (635)
+||||++ |+|.+++.... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.
T Consensus 96 lv~e~~~-~~L~~~l~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~g---i~H~dlkp~Nili~~~~~~kl~Dfg~~~ 168 (326)
T 1blx_A 96 LVFEHVD-QDLTTYLDKVP---EPGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLAR 168 (326)
T ss_dssp EEEECCS-CBHHHHHHHSC---TTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECSCCSCC
T ss_pred EEEecCC-CCHHHHHHhcc---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCCHHHeEEcCCCCEEEecCcccc
Confidence 9999998 69999987543 234899999999999999999999998 9999999999999999999999999997
Q ss_pred CCCCC---CCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhh-------hc
Q 006677 491 LMNVP---ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVR-------EE 560 (635)
Q Consensus 491 ~~~~~---~~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~-------~~ 560 (635)
..... ....+++.|+|||++.+..++.++||||||+++|||++|+.||...... .....+.. ..
T Consensus 169 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~------~~~~~i~~~~~~~~~~~ 242 (326)
T 1blx_A 169 IYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV------DQLGKILDVIGLPGEED 242 (326)
T ss_dssp CCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH------HHHHHHHHHHCCCCGGG
T ss_pred cccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHH------HHHHHHHHHcCCCCccc
Confidence 76432 2345788999999999999999999999999999999999999854321 11111111 11
Q ss_pred cccccchhh--hh------cccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006677 561 WTAEVFDVE--LM------RFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 561 ~~~~~~d~~--~~------~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 607 (635)
|........ .. ...........+.+++.+||+.||++|||+.|++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 297 (326)
T 1blx_A 243 WPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 297 (326)
T ss_dssp SCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred CccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 111000000 00 000001123456678889999999999999999963
No 231
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=4.3e-37 Score=329.58 Aligned_cols=259 Identities=24% Similarity=0.338 Sum_probs=187.7
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccCChHHHHHHHHHHHhhcCCCceeceeEEEEeCC------eeEEEEEe
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKD------EKLLVYDY 415 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~------~~~lv~e~ 415 (635)
.+.||+|+||.||+|... +++.||||++.... ....+|+++++++ +||||+++++++.... ..++||||
T Consensus 59 ~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~E~~il~~l-~hpniv~l~~~~~~~~~~~~~~~~~lv~e~ 134 (420)
T 1j1b_A 59 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK---RFKNRELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDY 134 (420)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEECCT---TSCCHHHHHHHTC-CCTTBCCEEEEEEEEETTTTEEEEEEEEEC
T ss_pred eeEEeeCCCEEEEEEEECCCCcEEEEEEecccc---hhHHHHHHHHHHc-CCCCccceeeEEeccCCCCcceeEEeehhc
Confidence 468999999999999985 48899999986542 3345799999999 9999999999986432 25789999
Q ss_pred ccCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCC-CCeEEeecCCCCCCCC
Q 006677 416 FASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQD-LDGCISDFGLTPLMNV 494 (635)
Q Consensus 416 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~-~~~ki~DfGla~~~~~ 494 (635)
+++ ++.+.+..... ....+++..+..++.||+.||+|||+.+ |+||||||+|||++.+ +.+||+|||+++....
T Consensus 135 ~~~-~l~~~~~~~~~-~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~~ 209 (420)
T 1j1b_A 135 VPE-TVYRVARHYSR-AKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 209 (420)
T ss_dssp CCE-EHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCSGGGEEEETTTTEEEECCCTTCEECCT
T ss_pred ccc-cHHHHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChhhEEEeCCCCeEEeccchhhhhccc
Confidence 986 66665542211 1345999999999999999999999998 9999999999999965 5689999999976543
Q ss_pred C---CCCCCCCcccCcccccCC-CCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhh---hcc---ccc
Q 006677 495 P---ATPSRSAGYRAPEVIETR-KHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVR---EEW---TAE 564 (635)
Q Consensus 495 ~---~~~~~~~~y~aPE~~~~~-~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~---~~~---~~~ 564 (635)
. ....+|+.|+|||++.+. .++.++|||||||++|||++|+.||.+....+ .+...+..... +.+ ...
T Consensus 210 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~--~l~~i~~~lg~p~~~~~~~~~~~ 287 (420)
T 1j1b_A 210 GEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD--QLVEIIKVLGTPTREQIREMNPN 287 (420)
T ss_dssp TCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHHHHCSCCHHHHHHHCSC
T ss_pred CCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHHhCCCCHHHHHhhChh
Confidence 2 234578899999998764 78999999999999999999999998643211 11111111000 000 000
Q ss_pred cchhhhhcc--c-----ChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHHHhh
Q 006677 565 VFDVELMRF--Q-----NIEEEMVQMLQIGMACVAKVPDMRPNMDEVVR--MIEEVR 612 (635)
Q Consensus 565 ~~d~~~~~~--~-----~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~--~L~~~~ 612 (635)
..+..+... . ........+.+|+.+||+.||++|||+.|+++ .++++.
T Consensus 288 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f~~~~ 344 (420)
T 1j1b_A 288 YTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 344 (420)
T ss_dssp CCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGG
T ss_pred hhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHhhcccc
Confidence 000000000 0 00111245778888999999999999999997 455544
No 232
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=2.3e-36 Score=318.85 Aligned_cols=252 Identities=22% Similarity=0.334 Sum_probs=190.4
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccCC---hHHHHHHHHHHHhhcCCCceeceeEEEEeCCee------EEE
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEK------LLV 412 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~------~lv 412 (635)
.+.||+|+||+||+|... +++.||+|++...... .+.+.+|+.++.++ +||||+++++++...+.. ++|
T Consensus 47 ~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~~lv 125 (371)
T 4exu_A 47 PTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHM-QHENVIGLLDVFTPASSLRNFYDFYLV 125 (371)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHC-CCTTBCCCSEEECSCSSSTTCCCCEEE
T ss_pred EeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhc-CCCCchhhhhheeccCCcccceeEEEE
Confidence 467999999999999965 5788999999765433 35678899999999 899999999999877654 999
Q ss_pred EEeccCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCC
Q 006677 413 YDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM 492 (635)
Q Consensus 413 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~ 492 (635)
|||+. ++|.+++.. .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++..
T Consensus 126 ~e~~~-~~l~~~~~~-------~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~ 194 (371)
T 4exu_A 126 MPFMQ-TDLQKIMGM-------EFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHA 194 (371)
T ss_dssp EECCC-EEHHHHTTS-------CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECSTTCC---
T ss_pred Ecccc-ccHHHHhhc-------CCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCcCHHHeEECCCCCEEEEecCccccc
Confidence 99997 588888742 3899999999999999999999998 999999999999999999999999999876
Q ss_pred CCCC-CCCCCCcccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhh------ccccc
Q 006677 493 NVPA-TPSRSAGYRAPEVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVRE------EWTAE 564 (635)
Q Consensus 493 ~~~~-~~~~~~~y~aPE~~~~-~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~------~~~~~ 564 (635)
.... ...+|+.|+|||++.+ ..++.++|||||||++|||++|+.||.+.... .....+... .+...
T Consensus 195 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~------~~~~~i~~~~~~~~~~~~~~ 268 (371)
T 4exu_A 195 DAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYL------DQLTQILKVTGVPGTEFVQK 268 (371)
T ss_dssp -----CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHH------HHHHHHHHHHCCCCHHHHTT
T ss_pred ccCcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChH------HHHHHHHHHhCCCcHHHHHH
Confidence 5433 3467899999999987 67899999999999999999999999764321 111111110 00000
Q ss_pred cch-------hhhhc--ccCh----HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HHHhh
Q 006677 565 VFD-------VELMR--FQNI----EEEMVQMLQIGMACVAKVPDMRPNMDEVVRM--IEEVR 612 (635)
Q Consensus 565 ~~d-------~~~~~--~~~~----~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~--L~~~~ 612 (635)
..+ ..... .... ......+.+++.+|++.||++|||++|++++ ++.+.
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~ 331 (371)
T 4exu_A 269 LNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFR 331 (371)
T ss_dssp CSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTTC
T ss_pred hhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcCcccccCC
Confidence 000 00000 0000 1123467788889999999999999999984 44443
No 233
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=2.6e-36 Score=310.79 Aligned_cols=241 Identities=20% Similarity=0.306 Sum_probs=188.8
Q ss_pred hccccccCceEEEEEEecCCCeEEEEEeecccCC---hHHHHHHHHHHHhhcC-CCceeceeEEEEeCCeeEEEEEeccC
Q 006677 343 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQ-HPNVVPLRAYYYSKDEKLLVYDYFAS 418 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~-h~niv~l~~~~~~~~~~~lv~e~~~~ 418 (635)
.+.||+|+||.||++...+++.||+|++...... .+.+.+|++++.++.+ |+||+++++++...+..++||| +.+
T Consensus 33 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e-~~~ 111 (313)
T 3cek_A 33 LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGN 111 (313)
T ss_dssp EEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEEEC-CCS
T ss_pred EEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEEEe-cCC
Confidence 4689999999999999888999999999765433 3568889999999953 7999999999999999999999 668
Q ss_pred CChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCCC--
Q 006677 419 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA-- 496 (635)
Q Consensus 419 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~~-- 496 (635)
++|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||++++ +.+||+|||++.......
T Consensus 112 ~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~~~~~ 182 (313)
T 3cek_A 112 IDLNSWLKKK-----KSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTS 182 (313)
T ss_dssp EEHHHHHHHC-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEET-TEEEECCCSSSCC-------
T ss_pred CcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcccEEEEC-CeEEEeeccccccccCcccc
Confidence 8999999743 34899999999999999999999998 999999999999964 899999999998764322
Q ss_pred ----CCCCCCcccCcccccC-----------CCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcc
Q 006677 497 ----TPSRSAGYRAPEVIET-----------RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEW 561 (635)
Q Consensus 497 ----~~~~~~~y~aPE~~~~-----------~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 561 (635)
...+++.|+|||++.+ ..++.++||||||+++|||++|+.||.... ..............
T Consensus 183 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~-----~~~~~~~~~~~~~~ 257 (313)
T 3cek_A 183 VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII-----NQISKLHAIIDPNH 257 (313)
T ss_dssp -------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCC-----SHHHHHHHHHCTTS
T ss_pred ccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHH-----HHHHHHHHHHhccc
Confidence 2347889999999875 468889999999999999999999997432 11122222222111
Q ss_pred ccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 006677 562 TAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMI 608 (635)
Q Consensus 562 ~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L 608 (635)
.... ... ....+.+++.+||+.||++||++.|++++-
T Consensus 258 ~~~~-------~~~---~~~~l~~li~~~l~~dp~~Rps~~ell~h~ 294 (313)
T 3cek_A 258 EIEF-------PDI---PEKDLQDVLKCCLKRDPKQRISIPELLAHP 294 (313)
T ss_dssp CCCC-------CCC---SCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred ccCC-------ccc---chHHHHHHHHHHccCCcccCcCHHHHhcCc
Confidence 1100 011 123567788899999999999999999853
No 234
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=7.8e-37 Score=320.24 Aligned_cols=252 Identities=23% Similarity=0.324 Sum_probs=190.1
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccCC---hHHHHHHHHHHHhhcCCCceeceeEEEEeCCe------eEEE
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDE------KLLV 412 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~------~~lv 412 (635)
.+.||+|+||.||+|... +++.||||++...... .+.+.+|+.++.++ +||||+++++++...+. .++|
T Consensus 29 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~~~lv 107 (353)
T 3coi_A 29 PTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHM-QHENVIGLLDVFTPASSLRNFYDFYLV 107 (353)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHC-CCTTBCCCSEEECSCSSGGGCCCCEEE
T ss_pred eeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhc-CCCCcccHhheEecccccccceeEEEE
Confidence 467999999999999975 5789999999765433 35678899999999 89999999999987654 4999
Q ss_pred EEeccCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCC
Q 006677 413 YDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM 492 (635)
Q Consensus 413 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~ 492 (635)
|||+. |+|.+++.. .+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||++...
T Consensus 108 ~e~~~-~~l~~~~~~-------~~~~~~~~~i~~qi~~al~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~ 176 (353)
T 3coi_A 108 MPFMQ-TDLQKIMGL-------KFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHA 176 (353)
T ss_dssp EECCS-EEGGGTTTS-------CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECTTCCEEECSTTCTTC-
T ss_pred ecccc-CCHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEeECCCCcEEEeecccccCC
Confidence 99997 588888742 3899999999999999999999998 999999999999999999999999999876
Q ss_pred CCCC-CCCCCCcccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhh------ccccc
Q 006677 493 NVPA-TPSRSAGYRAPEVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVRE------EWTAE 564 (635)
Q Consensus 493 ~~~~-~~~~~~~y~aPE~~~~-~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~------~~~~~ 564 (635)
.... ...+++.|+|||++.+ ..++.++|||||||++|||++|+.||.+.+.. .....+... .+...
T Consensus 177 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~------~~~~~i~~~~~~~~~~~~~~ 250 (353)
T 3coi_A 177 DAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYL------DQLTQILKVTGVPGTEFVQK 250 (353)
T ss_dssp -------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHH------HHHHHHHHHHCBCCHHHHTT
T ss_pred CCCccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHHHhCCCCHHHHHH
Confidence 5432 3457889999999877 67899999999999999999999999764321 111111110 00000
Q ss_pred cchh-------hhh-----c-ccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HHHhh
Q 006677 565 VFDV-------ELM-----R-FQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM--IEEVR 612 (635)
Q Consensus 565 ~~d~-------~~~-----~-~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~--L~~~~ 612 (635)
+.+. .+. . ..........+.+++.+|++.||++|||++|++++ ++.+.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~~ 313 (353)
T 3coi_A 251 LNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFR 313 (353)
T ss_dssp CSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTTC
T ss_pred HhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhhcc
Confidence 0000 000 0 00011223467778889999999999999999973 44443
No 235
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=3.2e-36 Score=308.70 Aligned_cols=239 Identities=21% Similarity=0.342 Sum_probs=187.8
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeeccc-----CChHHHHHHHHHHHhhcCCCceeceeEEEE--eCCeeEEEEE
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVV-----VGKRDFEQQMEIVGRVGQHPNVVPLRAYYY--SKDEKLLVYD 414 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~-----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~--~~~~~~lv~e 414 (635)
.+.||+|+||.||+|... +++.||+|++.... .....+.+|++++.++ +||||+++++++. ..+..++|||
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~~lv~e 88 (305)
T 2wtk_C 10 GDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRL-RHKNVIQLVDVLYNEEKQKMYMVME 88 (305)
T ss_dssp CCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTC-CCTTBCCEEEEEECC---CEEEEEE
T ss_pred eeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhc-CCCCeeEEEEEEEcCCCCeEEEEeh
Confidence 467999999999999975 57889999997542 2346788999999999 8999999999985 3457899999
Q ss_pred eccCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCC
Q 006677 415 YFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV 494 (635)
Q Consensus 415 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~ 494 (635)
|++++ |.+++.... ...+++..+..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++.....
T Consensus 89 ~~~~~-l~~~~~~~~---~~~~~~~~~~~~~~qi~~al~~LH~~~---i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~ 161 (305)
T 2wtk_C 89 YCVCG-MQEMLDSVP---EKRFPVCQAHGYFCQLIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEALHP 161 (305)
T ss_dssp CCSEE-HHHHHHHST---TCSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEECCT
T ss_pred hccCC-HHHHHHhCc---ccccCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCcccEEEcCCCcEEeeccccccccCc
Confidence 99876 777765433 235899999999999999999999998 99999999999999999999999999876542
Q ss_pred C------CCCCCCCcccCcccccCCC--CCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccc
Q 006677 495 P------ATPSRSAGYRAPEVIETRK--HSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVF 566 (635)
Q Consensus 495 ~------~~~~~~~~y~aPE~~~~~~--~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 566 (635)
. ....+++.|+|||++.+.. ++.++||||||+++|||++|+.||.... .......+......
T Consensus 162 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~------~~~~~~~i~~~~~~---- 231 (305)
T 2wtk_C 162 FAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDN------IYKLFENIGKGSYA---- 231 (305)
T ss_dssp TCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSS------HHHHHHHHHHCCCC----
T ss_pred cccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCch------HHHHHHHHhcCCCC----
Confidence 1 2345788999999997644 3779999999999999999999997532 12222222211110
Q ss_pred hhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006677 567 DVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 567 d~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 607 (635)
.. ......+.+++.+||+.||++|||++|++++
T Consensus 232 -----~~---~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 232 -----IP---GDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp -----CC---SSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred -----CC---CccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 00 1122356678889999999999999999985
No 236
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=1.5e-36 Score=317.93 Aligned_cols=256 Identities=20% Similarity=0.280 Sum_probs=190.4
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccC--ChHHHHHHHHHHHhhcCCCceeceeEEEEeC-----CeeEEEEE
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSK-----DEKLLVYD 414 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~-----~~~~lv~e 414 (635)
.+.||+|+||.||+|... +++.||||++..... ....+.+|++++.++ +||||+++++++... ...++|||
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~~lv~e 94 (353)
T 2b9h_A 16 KSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHF-KHENIITIFNIQRPDSFENFNEVYIIQE 94 (353)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHC-CCTTBCCEEEECCCSCSTTCCCEEEEEC
T ss_pred eeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhC-cCCCcCCeeeeecccccCccceEEEEEe
Confidence 467999999999999976 578899999964332 235677899999999 899999999998764 57899999
Q ss_pred eccCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCC
Q 006677 415 YFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV 494 (635)
Q Consensus 415 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~ 494 (635)
|+. |+|.+++.. ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.....
T Consensus 95 ~~~-~~L~~~~~~------~~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~ 164 (353)
T 2b9h_A 95 LMQ-TDLHRVIST------QMLSDDHIQYFIYQTLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDE 164 (353)
T ss_dssp CCS-EEHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCCTTCEECC-
T ss_pred ccC-ccHHHHHhh------cCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEEcCCCcEEEEeccccccccc
Confidence 997 599999864 24899999999999999999999998 99999999999999999999999999976542
Q ss_pred CC--------------CCCCCCcccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhh
Q 006677 495 PA--------------TPSRSAGYRAPEVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVRE 559 (635)
Q Consensus 495 ~~--------------~~~~~~~y~aPE~~~~-~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 559 (635)
.. ...+|+.|+|||++.+ ..++.++|||||||++|||++|+.||......+. ..........
T Consensus 165 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~---~~~~~~~~~~ 241 (353)
T 2b9h_A 165 SAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQ---LLLIFGIIGT 241 (353)
T ss_dssp ---------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH---HHHHHHHHCC
T ss_pred ccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHH---HHHHHHHhCC
Confidence 11 2346888999998754 6789999999999999999999999986432110 0001111100
Q ss_pred cc----ccccchh-------hhhcc--cC----hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHHHhh
Q 006677 560 EW----TAEVFDV-------ELMRF--QN----IEEEMVQMLQIGMACVAKVPDMRPNMDEVVR--MIEEVR 612 (635)
Q Consensus 560 ~~----~~~~~d~-------~~~~~--~~----~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~--~L~~~~ 612 (635)
.. ....... .+... .. .......+.+++.+||+.||++|||++|+++ .++.+.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 313 (353)
T 2b9h_A 242 PHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYH 313 (353)
T ss_dssp CCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred CchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCccccccC
Confidence 00 0000000 00000 00 0112345678888999999999999999998 344433
No 237
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=2.8e-36 Score=308.41 Aligned_cols=241 Identities=21% Similarity=0.357 Sum_probs=184.8
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccCChHHHHHHHHHHHhhcCCCceeceeEEEEe-------------CCe
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYS-------------KDE 408 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~-------------~~~ 408 (635)
.+.||+|+||.||+|... +++.||+|++.......+.+.+|++++.++ +||||+++++++.. .+.
T Consensus 11 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (303)
T 1zy4_A 11 IAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASL-NHQYVVRYYAAWLERRNFVKPMTAVKKKST 89 (303)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEEEHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEECCCCCC------CEEE
T ss_pred hheeccCCcEEEEEEEEcCCCeEEEEEEEeccHHHHHHHHHHHHHHHhc-CchHHHHHHHHHHhhcchhhhhcccccCCc
Confidence 468999999999999974 688999999976544456788999999999 89999999999865 346
Q ss_pred eEEEEEeccCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCC
Q 006677 409 KLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGL 488 (635)
Q Consensus 409 ~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGl 488 (635)
.++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+
T Consensus 90 ~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~ 162 (303)
T 1zy4_A 90 LFIQMEYCENGTLYDLIHSEN----LNQQRDEYWRLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGL 162 (303)
T ss_dssp EEEEEECCCSCBHHHHHHHSC----GGGCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCCCC
T ss_pred eEEEEecCCCCCHHHhhhccc----cccchHHHHHHHHHHHHHHHHHHhCC---eecccCCHHhEEEcCCCCEEEeeCcc
Confidence 789999999999999997432 34788999999999999999999998 99999999999999999999999999
Q ss_pred CCCCCCC------------------CCCCCCCcccCcccccCC-CCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCCh
Q 006677 489 TPLMNVP------------------ATPSRSAGYRAPEVIETR-KHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDL 549 (635)
Q Consensus 489 a~~~~~~------------------~~~~~~~~y~aPE~~~~~-~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~ 549 (635)
+...... ....+++.|+|||++.+. .++.++|||||||++|||++ ||.... +.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~-----~~ 234 (303)
T 1zy4_A 163 AKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGM-----ER 234 (303)
T ss_dssp CSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHH-----HH
T ss_pred hhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCch-----hH
Confidence 8765421 123467889999999764 68999999999999999998 553210 11
Q ss_pred hHHHHHHhhhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006677 550 PRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 550 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 607 (635)
............ .+... ........+.+++.+||+.||++|||+.|++++
T Consensus 235 ~~~~~~~~~~~~---~~~~~-----~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 284 (303)
T 1zy4_A 235 VNILKKLRSVSI---EFPPD-----FDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS 284 (303)
T ss_dssp HHHHHHHHSTTC---CCCTT-----CCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred HHHHHhcccccc---ccCcc-----ccccchHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence 111111111100 00000 011223456778889999999999999999873
No 238
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=3.3e-36 Score=305.96 Aligned_cols=241 Identities=21% Similarity=0.333 Sum_probs=192.9
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccC---ChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEeccC
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV---GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS 418 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~ 418 (635)
.+.||+|+||+||+|... +++.||+|++..... ..+.+.+|++++.++ +||||+++++++...+..++||||+++
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~ 105 (287)
T 2wei_A 27 VCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL-DHPNIMKLFEILEDSSSFYIVGELYTG 105 (287)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred eEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhc-cCCCccEEEEEEeCCCeEEEEEEccCC
Confidence 578999999999999976 588999999875532 456788999999999 999999999999999999999999999
Q ss_pred CChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCC---CCeEEeecCCCCCCCCC
Q 006677 419 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQD---LDGCISDFGLTPLMNVP 495 (635)
Q Consensus 419 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~---~~~ki~DfGla~~~~~~ 495 (635)
++|.+++... ..+++..+..++.|++.||+|||+.+ ++||||||+||+++.+ +.+||+|||++......
T Consensus 106 ~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~ 177 (287)
T 2wei_A 106 GELFDEIIKR-----KRFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN 177 (287)
T ss_dssp CBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCC
T ss_pred CCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCChhhEEEecCCCcccEEEeccCcceeecCC
Confidence 9999988643 24899999999999999999999998 9999999999999764 47999999998766543
Q ss_pred CCC---CCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhc
Q 006677 496 ATP---SRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMR 572 (635)
Q Consensus 496 ~~~---~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 572 (635)
... .+++.|+|||.+.+ .++.++||||||+++|||++|..||..... ......+........ ...
T Consensus 178 ~~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~------~~~~~~~~~~~~~~~-----~~~ 245 (287)
T 2wei_A 178 TKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNE------YDILKRVETGKYAFD-----LPQ 245 (287)
T ss_dssp SSCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHCCCCCC-----SGG
T ss_pred CccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCH------HHHHHHHHcCCCCCC-----chh
Confidence 322 25677999999876 489999999999999999999999975432 122222222111110 001
Q ss_pred ccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006677 573 FQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 573 ~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 607 (635)
.. .....+.+++.+|++.||++|||+.|++++
T Consensus 246 ~~---~~~~~~~~li~~~l~~dp~~Rps~~ell~h 277 (287)
T 2wei_A 246 WR---TISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (287)
T ss_dssp GT---TSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred hh---hcCHHHHHHHHHHcccChhhCcCHHHHhcC
Confidence 11 122356778889999999999999999983
No 239
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.2e-36 Score=326.86 Aligned_cols=239 Identities=21% Similarity=0.350 Sum_probs=180.7
Q ss_pred hccccccCceEEEEEEecCCCeEEEEEeecccCChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEeccCCChh
Q 006677 343 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLS 422 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~ 422 (635)
.++||+|+||+||.....+++.||||++.... ...+.+|+++++++.+||||+++++++.+.+..++||||+. |+|.
T Consensus 29 ~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~--~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~-g~L~ 105 (432)
T 3p23_A 29 KDVLGHGAEGTIVYRGMFDNRDVAVKRILPEC--FSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA-ATLQ 105 (432)
T ss_dssp EEEEEECGGGCEEEEEESSSSEEEEEEECTTT--EEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS-EEHH
T ss_pred CCeeecCcCEEEEEEEEeCCeEEEEEEECHHH--HHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC-CCHH
Confidence 46899999999766556678999999986532 23467899999998789999999999999999999999996 5999
Q ss_pred hhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcC-----CCCeEEeecCCCCCCCCC--
Q 006677 423 TLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQ-----DLDGCISDFGLTPLMNVP-- 495 (635)
Q Consensus 423 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~-----~~~~ki~DfGla~~~~~~-- 495 (635)
+++..... ...+..+..++.||+.||+|||+.+ |+||||||+|||++. ...+||+|||+++.....
T Consensus 106 ~~l~~~~~----~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~ 178 (432)
T 3p23_A 106 EYVEQKDF----AHLGLEPITLLQQTTSGLAHLHSLN---IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRH 178 (432)
T ss_dssp HHHHSSSC----CCCSSCHHHHHHHHHHHHHHHHHTT---CCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC-----
T ss_pred HHHHhcCC----CccchhHHHHHHHHHHHHHHHHHCc---CEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCc
Confidence 99975432 2444456789999999999999998 999999999999953 346889999999766432
Q ss_pred -----CCCCCCCcccCccccc---CCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccc
Q 006677 496 -----ATPSRSAGYRAPEVIE---TRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVF 566 (635)
Q Consensus 496 -----~~~~~~~~y~aPE~~~---~~~~~~k~Dvws~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 566 (635)
....+|+.|+|||++. ...++.++|||||||++|||++ |..||...... ....... .......
T Consensus 179 ~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~-------~~~~~~~-~~~~~~~ 250 (432)
T 3p23_A 179 SFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQR-------QANILLG-ACSLDCL 250 (432)
T ss_dssp -------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTH-------HHHHHTT-CCCCTTS
T ss_pred ceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHH-------HHHHHhc-cCCcccc
Confidence 2345899999999997 4567889999999999999999 99999643211 1111111 1111000
Q ss_pred hhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006677 567 DVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVR 606 (635)
Q Consensus 567 d~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 606 (635)
.........+.+++.+||+.||++|||++|+++
T Consensus 251 -------~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 251 -------HPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp -------CTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred -------CccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 011123344677888999999999999999985
No 240
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=1.7e-36 Score=314.11 Aligned_cols=248 Identities=22% Similarity=0.343 Sum_probs=170.8
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccCC--hHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEeccCC
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG--KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASG 419 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~--~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g 419 (635)
.+.||+|+||.||+|... +++.||||++...... ..++..|+..+.+..+||||+++++++...+..++||||+++
T Consensus 27 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e~~~~- 105 (327)
T 3aln_A 27 LGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMST- 105 (327)
T ss_dssp -CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEECCCSE-
T ss_pred hheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEeecCC-
Confidence 467999999999999975 5788999999765322 334556666444444999999999999999999999999985
Q ss_pred ChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCCC--
Q 006677 420 SLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSM-GGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA-- 496 (635)
Q Consensus 420 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~~-- 496 (635)
+|.+++..........+++..+..++.|++.||.|||+. + |+||||||+||+++.++.+||+|||+++......
T Consensus 106 ~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~---ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 182 (327)
T 3aln_A 106 SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLK---IIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAK 182 (327)
T ss_dssp EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHS---CCCSCCCGGGEEEETTTEEEECCCSSSCC-------
T ss_pred ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCC---EeECCCCHHHEEEcCCCCEEEccCCCceeccccccc
Confidence 887777532211234589999999999999999999998 8 9999999999999999999999999997764432
Q ss_pred -CCCCCCcccCcccc----cCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhh
Q 006677 497 -TPSRSAGYRAPEVI----ETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELM 571 (635)
Q Consensus 497 -~~~~~~~y~aPE~~----~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 571 (635)
...+++.|+|||++ .+..++.++||||||+++|||++|+.||........ ......... .. .+.
T Consensus 183 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-----~~~~~~~~~-~~-----~~~ 251 (327)
T 3aln_A 183 TRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFD-----QLTQVVKGD-PP-----QLS 251 (327)
T ss_dssp -----------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC------------CCCCCSC-CC-----CCC
T ss_pred ccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHH-----HHHHHhcCC-CC-----CCC
Confidence 23578889999998 456789999999999999999999999975431100 000000000 00 000
Q ss_pred cccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006677 572 RFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVR 606 (635)
Q Consensus 572 ~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 606 (635)
..........+.+++.+||+.||++|||+.|+++
T Consensus 252 -~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 252 -NSEEREFSPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp -CCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred -CcccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 0000112345677888999999999999999988
No 241
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=3.4e-36 Score=310.34 Aligned_cols=248 Identities=21% Similarity=0.298 Sum_probs=182.0
Q ss_pred hccccccCceEEEEEEecC-CCeEEEEEeecccC-ChHHHHHHHHHHHhhcCCCceeceeEEEE--------------eC
Q 006677 343 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVVV-GKRDFEQQMEIVGRVGQHPNVVPLRAYYY--------------SK 406 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~~-~~~~~~~e~~~l~~l~~h~niv~l~~~~~--------------~~ 406 (635)
.+.||+|+||.||+|.... ++.||+|++..... ..+.+.+|++++.++ +||||+++++++. ..
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~~~~~~~ 94 (320)
T 2i6l_A 16 LKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRL-DHDNIVKVFEILGPSGSQLTDDVGSLTEL 94 (320)
T ss_dssp EEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTC-CCTTBCCEEEEECTTSCBCCC----CCSC
T ss_pred EEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhc-CCCCeeEEEEecccccccccccccccccc
Confidence 4679999999999999765 78899999875432 246788999999999 9999999999873 34
Q ss_pred CeeEEEEEeccCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEc-CCCCeEEee
Q 006677 407 DEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLIN-QDLDGCISD 485 (635)
Q Consensus 407 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~-~~~~~ki~D 485 (635)
...++||||++ |+|.+++.. ..+++..+..++.|++.||+|||+.+ |+||||||+||+++ +++.+||+|
T Consensus 95 ~~~~lv~e~~~-~~L~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~kl~D 164 (320)
T 2i6l_A 95 NSVYIVQEYME-TDLANVLEQ------GPLLEEHARLFMYQLLRGLKYIHSAN---VLHRDLKPANLFINTEDLVLKIGD 164 (320)
T ss_dssp SEEEEEEECCS-EEHHHHHTT------CCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEEETTTTEEEECC
T ss_pred CceeEEeeccC-CCHHHHhhc------CCccHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCeEEEcc
Confidence 67799999998 699999863 24899999999999999999999998 99999999999997 567999999
Q ss_pred cCCCCCCCCCC-------CCCCCCcccCcccccC-CCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHh
Q 006677 486 FGLTPLMNVPA-------TPSRSAGYRAPEVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVV 557 (635)
Q Consensus 486 fGla~~~~~~~-------~~~~~~~y~aPE~~~~-~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 557 (635)
||+++...... ...++..|+|||.+.+ ..++.++||||||+++|||++|+.||...... .....+.
T Consensus 165 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~------~~~~~~~ 238 (320)
T 2i6l_A 165 FGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHEL------EQMQLIL 238 (320)
T ss_dssp CTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHH
T ss_pred CccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHH------HHHHHHH
Confidence 99998764321 1235778999998865 67899999999999999999999999864321 1111111
Q ss_pred hhcccc-------------ccchhhhhcc-cC----hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006677 558 REEWTA-------------EVFDVELMRF-QN----IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 558 ~~~~~~-------------~~~d~~~~~~-~~----~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 607 (635)
...... .......... .. .......+.+++.+||+.||++|||++|++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (320)
T 2i6l_A 239 ESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH 306 (320)
T ss_dssp HHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred HhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCC
Confidence 110000 0000000000 00 01123457788889999999999999999883
No 242
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=1.4e-36 Score=313.32 Aligned_cols=241 Identities=18% Similarity=0.304 Sum_probs=170.5
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccCCh--HHHHHHHH-HHHhhcCCCceeceeEEEEeCCeeEEEEEeccC
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVGK--RDFEQQME-IVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS 418 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~--~~~~~e~~-~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~ 418 (635)
.+.||+|+||.||+|... +++.||||++....... .++..|.. ++..+ +||||+++++++...+..++||||+ +
T Consensus 30 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~i~~~~~~~~~~~~~~lv~e~~-~ 107 (318)
T 2dyl_A 30 LGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSH-DCPYIVQCFGTFITNTDVFIAMELM-G 107 (318)
T ss_dssp EEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTT-TCTTBCCEEEEEECSSEEEEEECCC-S
T ss_pred cceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhc-CCCceeeEEEEEecCCcEEEEEecc-C
Confidence 568999999999999975 58899999997654322 23333443 45555 9999999999999999999999999 4
Q ss_pred CChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCCC-
Q 006677 419 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSM-GGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA- 496 (635)
Q Consensus 419 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~~- 496 (635)
+.+..+.... ...+++..+..++.|++.||+|||++ + |+||||||+||+++.++.+||+|||++.......
T Consensus 108 ~~~~~l~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~ 180 (318)
T 2dyl_A 108 TCAEKLKKRM----QGPIPERILGKMTVAIVKALYYLKEKHG---VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKA 180 (318)
T ss_dssp EEHHHHHHHH----TSCCCHHHHHHHHHHHHHHHHHHHHHHC---CCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred CcHHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHHhhCC---EEeCCCCHHHEEECCCCCEEEEECCCchhccCCcc
Confidence 4555555422 23489999999999999999999995 7 9999999999999999999999999987654322
Q ss_pred --CCCCCCcccCccccc-----CCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhh
Q 006677 497 --TPSRSAGYRAPEVIE-----TRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVE 569 (635)
Q Consensus 497 --~~~~~~~y~aPE~~~-----~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 569 (635)
...+++.|+|||++. ...++.++||||||+++|||++|+.||..... ...............
T Consensus 181 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-----~~~~~~~~~~~~~~~------ 249 (318)
T 2dyl_A 181 KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKT-----DFEVLTKVLQEEPPL------ 249 (318)
T ss_dssp ------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCS-----HHHHHHHHHHSCCCC------
T ss_pred ccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCc-----cHHHHHHHhccCCCC------
Confidence 335788999999994 45688999999999999999999999975321 112222222221110
Q ss_pred hhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006677 570 LMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVR 606 (635)
Q Consensus 570 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 606 (635)
...... ....+.+++.+||+.||.+||+++|+++
T Consensus 250 ~~~~~~---~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 250 LPGHMG---FSGDFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp CCSSSC---CCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred CCccCC---CCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 000111 1235667788999999999999999988
No 243
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=9e-37 Score=315.28 Aligned_cols=233 Identities=21% Similarity=0.382 Sum_probs=189.7
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccCC-------hHHHHHHHHHHHhhc-CCCceeceeEEEEeCCeeEEEE
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG-------KRDFEQQMEIVGRVG-QHPNVVPLRAYYYSKDEKLLVY 413 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~-------~~~~~~e~~~l~~l~-~h~niv~l~~~~~~~~~~~lv~ 413 (635)
.+.||+|+||.||+|... +++.||||++...... ...+.+|++++.++. .|+||+++++++...+..++|+
T Consensus 48 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~~~~lv~ 127 (320)
T 3a99_A 48 GPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLIL 127 (320)
T ss_dssp EEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEEEEEE
T ss_pred EEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCCcEEEEE
Confidence 468999999999999864 5788999999765322 255778999999995 3799999999999999999999
Q ss_pred EeccC-CChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEc-CCCCeEEeecCCCCC
Q 006677 414 DYFAS-GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLIN-QDLDGCISDFGLTPL 491 (635)
Q Consensus 414 e~~~~-g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~-~~~~~ki~DfGla~~ 491 (635)
||+.+ ++|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++ +++.+||+|||++..
T Consensus 128 e~~~~~~~L~~~l~~~-----~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~~ 199 (320)
T 3a99_A 128 ERPEPVQDLFDFITER-----GALQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGAL 199 (320)
T ss_dssp ECCSSEEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred EcCCCCccHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---cEeCCCCHHHEEEeCCCCCEEEeeCccccc
Confidence 99986 8999998742 34899999999999999999999998 99999999999999 789999999999976
Q ss_pred CCCCC--CCCCCCcccCcccccCCCC-CCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchh
Q 006677 492 MNVPA--TPSRSAGYRAPEVIETRKH-SHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDV 568 (635)
Q Consensus 492 ~~~~~--~~~~~~~y~aPE~~~~~~~-~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 568 (635)
..... ...+++.|+|||++.+..+ +.++||||||+++|||++|+.||.... ....... .+
T Consensus 200 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~------------~~~~~~~---~~-- 262 (320)
T 3a99_A 200 LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------------EIIRGQV---FF-- 262 (320)
T ss_dssp CCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------------HHHHCCC---CC--
T ss_pred cccccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh------------hhhcccc---cc--
Confidence 65432 3457889999999987665 678999999999999999999996421 0111100 00
Q ss_pred hhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006677 569 ELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 569 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 607 (635)
... ....+.+++.+||+.||++|||++|++++
T Consensus 263 ----~~~---~~~~~~~li~~~l~~dp~~Rps~~~ll~h 294 (320)
T 3a99_A 263 ----RQR---VSSECQHLIRWCLALRPSDRPTFEEIQNH 294 (320)
T ss_dssp ----SSC---CCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ----ccc---CCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 011 12356678889999999999999999873
No 244
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=2e-36 Score=311.40 Aligned_cols=233 Identities=23% Similarity=0.381 Sum_probs=183.9
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccC-------ChHHHHHHHHHHHhhc---CCCceeceeEEEEeCCeeEE
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV-------GKRDFEQQMEIVGRVG---QHPNVVPLRAYYYSKDEKLL 411 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-------~~~~~~~e~~~l~~l~---~h~niv~l~~~~~~~~~~~l 411 (635)
.+.||+|+||.||+|... +++.||+|++..... ....+.+|+.++.++. +|+||+++++++...+..++
T Consensus 36 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~~~~~~~ 115 (312)
T 2iwi_A 36 GPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFML 115 (312)
T ss_dssp EEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC-----CEE
T ss_pred eeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEecCCeEEE
Confidence 568999999999999864 578899999975432 2234567888888875 79999999999999999999
Q ss_pred EEEe-ccCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEc-CCCCeEEeecCCC
Q 006677 412 VYDY-FASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLIN-QDLDGCISDFGLT 489 (635)
Q Consensus 412 v~e~-~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~-~~~~~ki~DfGla 489 (635)
|+|| +.+++|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+||+++ .++.+||+|||++
T Consensus 116 v~e~~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~kl~dfg~~ 187 (312)
T 2iwi_A 116 VLERPLPAQDLFDYITEK-----GPLGEGPSRCFFGQVVAAIQHCHSRG---VVHRDIKDENILIDLRRGCAKLIDFGSG 187 (312)
T ss_dssp EEECCSSEEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHHT---EECCCCSGGGEEEETTTTEEEECCCSSC
T ss_pred EEEecCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChhhEEEeCCCCeEEEEEcchh
Confidence 9999 7899999999742 24899999999999999999999998 99999999999999 8899999999998
Q ss_pred CCCCCCC--CCCCCCcccCcccccCCCCC-CccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccc
Q 006677 490 PLMNVPA--TPSRSAGYRAPEVIETRKHS-HKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVF 566 (635)
Q Consensus 490 ~~~~~~~--~~~~~~~y~aPE~~~~~~~~-~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 566 (635)
....... ...++..|+|||++.+..+. .++||||||+++|||++|+.||.... .......
T Consensus 188 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~------------~~~~~~~----- 250 (312)
T 2iwi_A 188 ALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ------------EILEAEL----- 250 (312)
T ss_dssp EECCSSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------------HHHHTCC-----
T ss_pred hhcccCcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH------------HHhhhcc-----
Confidence 7664432 34578899999999876664 58999999999999999999996321 0111100
Q ss_pred hhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006677 567 DVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 567 d~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 607 (635)
... ......+.+++.+||+.+|++|||++|++++
T Consensus 251 ----~~~---~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 284 (312)
T 2iwi_A 251 ----HFP---AHVSPDCCALIRRCLAPKPSSRPSLEEILLD 284 (312)
T ss_dssp ----CCC---TTSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred ----CCc---ccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000 1122356678889999999999999999874
No 245
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=5.4e-35 Score=296.78 Aligned_cols=229 Identities=12% Similarity=0.117 Sum_probs=178.0
Q ss_pred hccccccCceEEEEEEecC-CCeEEEEEeecccCCh----HHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEecc
Q 006677 343 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVVVGK----RDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 417 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~~~~----~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 417 (635)
.+.||+|+||.||+|.... ++.||+|++....... +.+.+|+.++.++ +||||+++++++..++..|+||||++
T Consensus 36 ~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~ 114 (286)
T 3uqc_A 36 LIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRI-DKPGVARVLDVVHTRAGGLVVAEWIR 114 (286)
T ss_dssp EEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEEETTEEEEEEECCC
T ss_pred EEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcC-CCCCcceeeEEEEECCcEEEEEEecC
Confidence 3679999999999999764 7899999998654432 6788999999999 99999999999999999999999999
Q ss_pred CCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCCCC
Q 006677 418 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPAT 497 (635)
Q Consensus 418 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~~~ 497 (635)
+++|.++++.. ....++..++.|++.||+|||+++ |+||||||+|||++.++.+||+++|
T Consensus 115 g~~L~~~l~~~-------~~~~~~~~i~~ql~~aL~~lH~~g---ivH~Dikp~NIll~~~g~~kl~~~~---------- 174 (286)
T 3uqc_A 115 GGSLQEVADTS-------PSPVGAIRAMQSLAAAADAAHRAG---VALSIDHPSRVRVSIDGDVVLAYPA---------- 174 (286)
T ss_dssp EEEHHHHHTTC-------CCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEEETTSCEEECSCC----------
T ss_pred CCCHHHHHhcC-------CChHHHHHHHHHHHHHHHHHHHCC---CccCCCCcccEEEcCCCCEEEEecc----------
Confidence 99999999531 345578899999999999999998 9999999999999999999998553
Q ss_pred CCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcccChH
Q 006677 498 PSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNIE 577 (635)
Q Consensus 498 ~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 577 (635)
|++ .++.++|||||||++|||+||+.||...+..+..... ............ .....
T Consensus 175 ------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~-------~~~~~~~~~~~~-~~~~~-- 231 (286)
T 3uqc_A 175 ------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPA-------ERDTAGQPIEPA-DIDRD-- 231 (286)
T ss_dssp ------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEEC-------CBCTTSCBCCHH-HHCTT--
T ss_pred ------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHH-------HHHhccCCCChh-hcccC--
Confidence 333 3688999999999999999999999876543321000 000000000000 00111
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhccCCC
Q 006677 578 EEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSE 617 (635)
Q Consensus 578 ~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~~~~~~ 617 (635)
....+.+++.+||+.||++| |+.|+++.|+++......
T Consensus 232 -~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~~~~ 269 (286)
T 3uqc_A 232 -IPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAVADR 269 (286)
T ss_dssp -SCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC----
T ss_pred -CCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhccCCc
Confidence 22346778889999999999 999999999999876653
No 246
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=2.3e-35 Score=301.62 Aligned_cols=227 Identities=18% Similarity=0.289 Sum_probs=175.3
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccCChHHHHHHHHHHHhhcCCCceeceeEEEEe----CCeeEEEEEecc
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYS----KDEKLLVYDYFA 417 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~----~~~~~lv~e~~~ 417 (635)
.++||+|+||.||+|... +++.||+|+++. ...+.+|++++.++.+||||+++++++.. ....++||||++
T Consensus 23 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~ 98 (299)
T 3m2w_A 23 SQVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLD 98 (299)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEC----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEECCCC
T ss_pred CcccccCCCeEEEEEEEcCCCcEEEEEEecc----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEeecC
Confidence 367999999999999974 578999999864 35678899988777799999999999987 667899999999
Q ss_pred CCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcC---CCCeEEeecCCCCCCCC
Q 006677 418 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQ---DLDGCISDFGLTPLMNV 494 (635)
Q Consensus 418 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~---~~~~ki~DfGla~~~~~ 494 (635)
+|+|.+++.... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++. ++.+||+|||++....
T Consensus 99 ~~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~- 171 (299)
T 3m2w_A 99 GGELFSRIQDRG---DQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT- 171 (299)
T ss_dssp SCBHHHHHHHCT---TCCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSTTCCEEECCCTTCEECT-
T ss_pred CCcHHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEecCCCCCcEEEeccccccccc-
Confidence 999999997543 235899999999999999999999998 999999999999998 7899999999986542
Q ss_pred CCCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhccc
Q 006677 495 PATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQ 574 (635)
Q Consensus 495 ~~~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 574 (635)
+..++.++|||||||++|||++|+.||......+.... .................
T Consensus 172 -----------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~- 226 (299)
T 3m2w_A 172 -----------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPG-------MKTRIRMGQYEFPNPEW- 226 (299)
T ss_dssp -----------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CC-------SCCSSCTTCCSSCHHHH-
T ss_pred -----------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHH-------HHHHHhhccccCCchhc-
Confidence 24577899999999999999999999975432221000 00000000000000000
Q ss_pred ChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006677 575 NIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 607 (635)
Q Consensus 575 ~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 607 (635)
......+.+++.+||+.||++|||+.|++++
T Consensus 227 --~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 257 (299)
T 3m2w_A 227 --SEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 257 (299)
T ss_dssp --TTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred --ccCCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 1123456778889999999999999999984
No 247
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.7e-35 Score=336.48 Aligned_cols=233 Identities=18% Similarity=0.266 Sum_probs=188.1
Q ss_pred hccccccCceEEEEEEec--CCCeEEEEEeecccC--ChHHHHHHHHHHHhhcCCCceeceeEEEEeCCe-----eEEEE
Q 006677 343 AEVLGKGSYGTAYKAVLE--ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDE-----KLLVY 413 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~--~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~-----~~lv~ 413 (635)
.+.||+|+||+||+|... +++.||||++..... ....+.+|++++.++ +||||+++++++...+. .|+||
T Consensus 85 ~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~~~~~~lv~ 163 (681)
T 2pzi_A 85 KGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEV-VHPSIVQIFNFVEHTDRHGDPVGYIVM 163 (681)
T ss_dssp EEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGC-CCTTBCCEEEEEEEECTTSCEEEEEEE
T ss_pred EEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhc-CCCCcCeEeeeEeecCCCCCceeEEEE
Confidence 467999999999999975 578899999865422 235678899999999 89999999999988765 69999
Q ss_pred EeccCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCC
Q 006677 414 DYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN 493 (635)
Q Consensus 414 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~ 493 (635)
||+++++|.+++.. .+++..++.++.||+.||+|||+++ |+||||||+|||++.+ .+||+|||+++...
T Consensus 164 E~~~g~~L~~~~~~-------~l~~~~~~~~~~qi~~aL~~lH~~g---iiHrDlkp~NIll~~~-~~kl~DFG~a~~~~ 232 (681)
T 2pzi_A 164 EYVGGQSLKRSKGQ-------KLPVAEAIAYLLEILPALSYLHSIG---LVYNDLKPENIMLTEE-QLKLIDLGAVSRIN 232 (681)
T ss_dssp ECCCCEECC----C-------CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECSS-CEEECCCTTCEETT
T ss_pred EeCCCCcHHHHHhC-------CCCHHHHHHHHHHHHHHHHHHHHCC---CeecccChHHeEEeCC-cEEEEecccchhcc
Confidence 99999999987752 4899999999999999999999998 9999999999999986 89999999998877
Q ss_pred CCCCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcc
Q 006677 494 VPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRF 573 (635)
Q Consensus 494 ~~~~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 573 (635)
......+|+.|+|||++.+. ++.++|||||||++|||++|..||.......... .
T Consensus 233 ~~~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~~~------------------------~ 287 (681)
T 2pzi_A 233 SFGYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYVDGLPE------------------------D 287 (681)
T ss_dssp CCSCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEECSSCCT------------------------T
T ss_pred cCCccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCcccccccccc------------------------c
Confidence 66667799999999998765 4889999999999999999999887532211100 0
Q ss_pred cChHHHHHHHHHHHHHcccCCCCCCCC-HHHHHHHHHHhh
Q 006677 574 QNIEEEMVQMLQIGMACVAKVPDMRPN-MDEVVRMIEEVR 612 (635)
Q Consensus 574 ~~~~~~~~~l~~l~~~cl~~~P~~RPs-~~evl~~L~~~~ 612 (635)
.........+.+++.+||+.||++||+ ++++...|..+.
T Consensus 288 ~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~ 327 (681)
T 2pzi_A 288 DPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVL 327 (681)
T ss_dssp CHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred ccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHH
Confidence 000112245678888999999999996 666666666554
No 248
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=7.8e-36 Score=330.82 Aligned_cols=263 Identities=19% Similarity=0.283 Sum_probs=197.3
Q ss_pred hhccccccCceEEEEEEec-CCCeEEEEEeecccC--ChHHHHHHHHHHHhhcCCCceeceeEEEEe------CCeeEEE
Q 006677 342 SAEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYS------KDEKLLV 412 (635)
Q Consensus 342 ~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~------~~~~~lv 412 (635)
..+.||+|+||+||+|... +++.||||++..... ..+.+.+|++++.++ +||||+++++++.. .+..++|
T Consensus 18 i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~v~~~~~~~~~~~~~~LV 96 (676)
T 3qa8_A 18 MKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKL-NHPNVVSAREVPDGLQKLAPNDLPLLA 96 (676)
T ss_dssp CCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHC-CBTTBCCEEECCTTTCCCCTTSSCCCE
T ss_pred EEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhC-CCCCCCceeeeecccccccCCCeEEEE
Confidence 3578999999999999974 588899999875422 245688999999999 99999999999765 5677999
Q ss_pred EEeccCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCC---eEEeecCCC
Q 006677 413 YDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLD---GCISDFGLT 489 (635)
Q Consensus 413 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~---~ki~DfGla 489 (635)
|||+++|+|.+++..... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++. +||+|||++
T Consensus 97 mEy~~ggsL~~~L~~~~~--~~~lse~~i~~I~~QLl~aL~yLHs~g---IVHrDLKP~NILl~~~g~~~~vKL~DFG~a 171 (676)
T 3qa8_A 97 MEYCEGGDLRKYLNQFEN--CCGLKEGPIRTLLSDISSALRYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYA 171 (676)
T ss_dssp EECCSSCBHHHHHHSSSC--TTCCCSSHHHHHHHHHHHHHHHHHHTT---BCCCCCCSTTEEEECCSSSCEEEECSCCCC
T ss_pred EEeCCCCCHHHHHHhccc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHeEeecCCCceeEEEcccccc
Confidence 999999999999986432 234888999999999999999999998 999999999999997765 999999999
Q ss_pred CCCCCCC---CCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhh--------
Q 006677 490 PLMNVPA---TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVR-------- 558 (635)
Q Consensus 490 ~~~~~~~---~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~-------- 558 (635)
....... ...+++.|+|||++.+..++.++|||||||++|||++|..||..... ...|......
T Consensus 172 ~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~-----~~~~~~~i~~~~~~~~~~ 246 (676)
T 3qa8_A 172 KELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQ-----PVQWHGKVREKSNEHIVV 246 (676)
T ss_dssp CBTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCH-----HHHSSTTCC------CCS
T ss_pred cccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccc-----hhhhhhhhhcccchhhhh
Confidence 8765432 34578899999999999999999999999999999999999965311 0001000000
Q ss_pred -hccccc-cchhhhhc-ccChHHHHHHHHHHHHHcccCCCCCCCCHHH-----HHHHHHHhhccC
Q 006677 559 -EEWTAE-VFDVELMR-FQNIEEEMVQMLQIGMACVAKVPDMRPNMDE-----VVRMIEEVRQSD 615 (635)
Q Consensus 559 -~~~~~~-~~d~~~~~-~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~e-----vl~~L~~~~~~~ 615 (635)
+..... .+...... ..........+.+++.+|++.||++|||++| ..+.++.+....
T Consensus 247 ~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL~~k 311 (676)
T 3qa8_A 247 YDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILSLK 311 (676)
T ss_dssp CCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHHCCC
T ss_pred hhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHHhcc
Confidence 000000 00000000 0011234456778888999999999999988 566777777554
No 249
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=1.2e-34 Score=309.85 Aligned_cols=236 Identities=13% Similarity=0.127 Sum_probs=172.2
Q ss_pred hccccccCceEEEEEEec-CCCeEEEEEeecccC----ChHHHHHHHHHHHhhcCC-Ccee---------c---------
Q 006677 343 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV----GKRDFEQQMEIVGRVGQH-PNVV---------P--------- 398 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~----~~~~~~~e~~~l~~l~~h-~niv---------~--------- 398 (635)
.++||+|+||+||+|... +++.||||++..... ..+.+.+|+.++..+ +| +|.. .
T Consensus 83 ~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (413)
T 3dzo_A 83 GTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLL-RGIKNQKQAKVHLRFIFPFDLVKDPQ 161 (413)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGS-TTCCSHHHHHHHTCBCCCCEEEECCC
T ss_pred ecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhh-ccCCCHHHHHHhcccccchhhcccCC
Confidence 468999999999999954 688999999873322 246788999888887 44 3211 1
Q ss_pred ---eeEEEEe-----CCeeEEEEEeccCCChhhhccCCC--CCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCC
Q 006677 399 ---LRAYYYS-----KDEKLLVYDYFASGSLSTLLHGNR--GAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNI 468 (635)
Q Consensus 399 ---l~~~~~~-----~~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dl 468 (635)
++.++.. ....+++|+++ +++|.++++... ......+++..+..++.||+.||+|||+++ |+||||
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---iiHrDi 237 (413)
T 3dzo_A 162 KKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG---LVHTYL 237 (413)
T ss_dssp ---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT---EECSCC
T ss_pred CCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCc
Confidence 1111111 12346666654 679998884210 012335888999999999999999999998 999999
Q ss_pred CCCCeEEcCCCCeEEeecCCCCCCCCCC-CCCCCCcccCcccc----------cCCCCCCccchhhHHHHHHHHHhCCCC
Q 006677 469 KASNVLINQDLDGCISDFGLTPLMNVPA-TPSRSAGYRAPEVI----------ETRKHSHKSDVYSFGVLLLEMLTGKAP 537 (635)
Q Consensus 469 k~~NIll~~~~~~ki~DfGla~~~~~~~-~~~~~~~y~aPE~~----------~~~~~~~k~Dvws~Gvvl~el~tg~~p 537 (635)
||+|||++.++.+||+|||+++...... ...+ +.|+|||++ .+..++.++|||||||++|||++|+.|
T Consensus 238 Kp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~P 316 (413)
T 3dzo_A 238 RPVDIVLDQRGGVFLTGFEHLVRDGASAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLP 316 (413)
T ss_dssp CGGGEEECTTCCEEECCGGGCEETTEEECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCC
T ss_pred ccceEEEecCCeEEEEeccceeecCCccccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCC
Confidence 9999999999999999999987655432 3456 899999999 556688999999999999999999999
Q ss_pred CCCCCCCCCCChhHHHHHHhhhccccccchhhhhcccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006677 538 LQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVR 606 (635)
Q Consensus 538 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 606 (635)
|......+... ..+......+ ..+.+++.+||+.||++||++.|+++
T Consensus 317 f~~~~~~~~~~-------------------~~~~~~~~~~---~~~~~li~~~l~~dP~~Rpt~~~~l~ 363 (413)
T 3dzo_A 317 NTDDAALGGSE-------------------WIFRSCKNIP---QPVRALLEGFLRYPKEDRLLPLQAME 363 (413)
T ss_dssp CCTTGGGSCSG-------------------GGGSSCCCCC---HHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCCcchhhhHH-------------------HHHhhcccCC---HHHHHHHHHHccCChhhCcCHHHHHh
Confidence 97654322211 0111111122 45677888999999999999777754
No 250
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=1.3e-33 Score=293.64 Aligned_cols=238 Identities=13% Similarity=0.173 Sum_probs=180.9
Q ss_pred HhhccccccCceEEEEEEecCCCeEEEEEeecccC---------ChHHHHHHHHHHHhhc--------CCCceeceeEEE
Q 006677 341 ASAEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVV---------GKRDFEQQMEIVGRVG--------QHPNVVPLRAYY 403 (635)
Q Consensus 341 ~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~---------~~~~~~~e~~~l~~l~--------~h~niv~l~~~~ 403 (635)
...+.||+|+||+||+|+. +++.||||++..... ..+.+.+|+.+++++. +||||+++.+.+
T Consensus 23 ~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~~~~ 101 (336)
T 2vuw_A 23 QRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSVH 101 (336)
T ss_dssp HTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEEEEE
T ss_pred hheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhccee
Confidence 4468899999999999998 579999999976532 2377899999999885 488888887775
Q ss_pred E------------------------------eCCeeEEEEEeccCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q 006677 404 Y------------------------------SKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVA 453 (635)
Q Consensus 404 ~------------------------------~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~ 453 (635)
. ..+..++||||+++|++.+.+.+ ..+++..+..++.||+.||+
T Consensus 102 ~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~------~~~~~~~~~~i~~qi~~aL~ 175 (336)
T 2vuw_A 102 CVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT------KLSSLATAKSILHQLTASLA 175 (336)
T ss_dssp EEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT------TCCCHHHHHHHHHHHHHHHH
T ss_pred EecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh------cCCCHHHHHHHHHHHHHHHH
Confidence 3 26788999999999977776642 24899999999999999999
Q ss_pred HHH-hcCCCCceecCCCCCCeEEcCCC--------------------CeEEeecCCCCCCCCCCCCCCCCcccCcccccC
Q 006677 454 HIH-SMGGPKFTHGNIKASNVLINQDL--------------------DGCISDFGLTPLMNVPATPSRSAGYRAPEVIET 512 (635)
Q Consensus 454 ~LH-~~~~~~ivH~Dlk~~NIll~~~~--------------------~~ki~DfGla~~~~~~~~~~~~~~y~aPE~~~~ 512 (635)
||| +.+ |+||||||+|||++.++ .+||+|||+|+..... ...+|+.|+|||++.+
T Consensus 176 ~lH~~~~---ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-~~~gt~~y~aPE~~~g 251 (336)
T 2vuw_A 176 VAEASLR---FEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-IVVFCDVSMDEDLFTG 251 (336)
T ss_dssp HHHHHHC---CBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-EEECCCCTTCSGGGCC
T ss_pred HHHHhCC---EeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-cEEEeecccChhhhcC
Confidence 999 888 99999999999999887 8999999999876533 3468899999999987
Q ss_pred CCCCCccchhhHHHH-HHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhhcccChHHHHHHHHHHHHHcc
Q 006677 513 RKHSHKSDVYSFGVL-LLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACV 591 (635)
Q Consensus 513 ~~~~~k~Dvws~Gvv-l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl 591 (635)
.. +.++||||+|++ .+++++|..||.. ..|.......-......... ............+.+++.+||
T Consensus 252 ~~-~~~~Diwsl~~~~~~~~~~g~~p~~~---------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~~dli~~~L 320 (336)
T 2vuw_A 252 DG-DYQFDIYRLMKKENNNRWGEYHPYSN---------VLWLHYLTDKMLKQMTFKTK-CNTPAMKQIKRKIQEFHRTML 320 (336)
T ss_dssp CS-SHHHHHHHHHHHHHTTCTTSCCTHHH---------HHHHHHHHHHHHHTCCCSSC-CCSHHHHHHHHHHHHHHHHGG
T ss_pred CC-ccceehhhhhCCCCcccccccCCCcc---------hhhhhHHHHhhhhhhccCcc-cchhhhhhcCHHHHHHHHHHh
Confidence 66 889999998777 7889999999852 11221111110000000000 001112345567888889999
Q ss_pred cCCCCCCCCHHHHH
Q 006677 592 AKVPDMRPNMDEVV 605 (635)
Q Consensus 592 ~~~P~~RPs~~evl 605 (635)
+.| |++|++
T Consensus 321 ~~d-----sa~e~l 329 (336)
T 2vuw_A 321 NFS-----SATDLL 329 (336)
T ss_dssp GSS-----SHHHHH
T ss_pred ccC-----CHHHHH
Confidence 976 999988
No 251
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.95 E-value=1.5e-28 Score=252.72 Aligned_cols=188 Identities=36% Similarity=0.675 Sum_probs=170.0
Q ss_pred CCChhHHHHHHHHHHhCCCCC-CCCCCCCCCCCCC--cceeEecCCC--CeEEEEEeCCCCccC--cCCcccccCCCCCc
Q 006677 25 ADLNSDRQALLDFADAVPHLR-KLNWSSTNPICQS--WVGINCTQDR--TRVFGLRLPGIGLVG--PIPNNTLGKLDALE 97 (635)
Q Consensus 25 ~~~~~~~~al~~~~~~~~~~~-~~~w~~~~~~c~~--w~gv~C~~~~--~~v~~l~l~~~~l~g--~l~~~~l~~l~~L~ 97 (635)
.|.+.|++||++||+++.+.. ..+|+.+.+|| . |.||.|+... ++|+.|+|++++++| .+|+ .|+++++|+
T Consensus 2 ~c~~~~~~aL~~~k~~~~~~~~l~~W~~~~~~C-~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~-~l~~l~~L~ 79 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLGNPTTLSSWLPTTDCC-NRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPS-SLANLPYLN 79 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCGGGTTCCTTSCTT-TTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCG-GGGGCTTCS
T ss_pred CCCHHHHHHHHHHHHhcCCcccccCCCCCCCCC-cCCCcceEeCCCCCCceEEEEECCCCCccCCcccCh-hHhCCCCCC
Confidence 478899999999999996543 44898776666 5 9999998654 799999999999999 8998 899999999
Q ss_pred EEEeec-CCCCCCCCCCCCCCCcccEEeeccCccCCcCCCCcc--CCcceeeccCccCcccCCchhhccccCCcEEcCCC
Q 006677 98 VLSLRS-NVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSN 174 (635)
Q Consensus 98 ~L~L~~-n~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N 174 (635)
+|+|++ |++.+.+|..|+++++|++|+|++|++++.+|..|. ++|++|+|++|+|++.+|..|.++++|++|+|++|
T Consensus 80 ~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 159 (313)
T 1ogq_A 80 FLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGN 159 (313)
T ss_dssp EEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSS
T ss_pred eeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCC
Confidence 999995 999999999999999999999999999999999887 89999999999999999999999999999999999
Q ss_pred cccccCCCC--CCC-CCcEEEeecccCcCCCCcccCCCCCCCcc
Q 006677 175 NLSGSIPNF--DIP-KLRHLNLSYNGLKGSIPSSLQKFPNSSFV 215 (635)
Q Consensus 175 ~l~~~~p~~--~l~-~L~~l~l~~N~l~g~~p~~~~~l~~l~~~ 215 (635)
+|+|.+|.. .++ +|+.|+|++|+++|.+|..+..++ |..+
T Consensus 160 ~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L 202 (313)
T 1ogq_A 160 RISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFV 202 (313)
T ss_dssp CCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEE
T ss_pred cccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEE
Confidence 999988875 676 999999999999999999888776 5554
No 252
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.95 E-value=2.3e-29 Score=278.44 Aligned_cols=181 Identities=17% Similarity=0.105 Sum_probs=127.7
Q ss_pred cccccCceEEEEEE-ecCCCeEEEEEeecccC-----------ChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEE
Q 006677 345 VLGKGSYGTAYKAV-LEESTTVVVKRLKEVVV-----------GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLV 412 (635)
Q Consensus 345 ~lG~G~fg~Vy~~~-~~~~~~vavK~l~~~~~-----------~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv 412 (635)
-.+.|++|.+..++ .--|+.+++|++..... ..++|.+|+++|+++..|+||+++++++++++..|||
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV 320 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV 320 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence 35667777666654 23478899999975421 2356899999999998999999999999999999999
Q ss_pred EEeccCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCC
Q 006677 413 YDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM 492 (635)
Q Consensus 413 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~ 492 (635)
|||++|++|.+++... .+++.. +|+.||+.||+|+|++| ||||||||+|||+++++.+||+|||+|+..
T Consensus 321 MEyv~G~~L~d~i~~~-----~~l~~~---~I~~QIl~AL~ylH~~G---IIHRDIKPeNILL~~dg~vKL~DFGlAr~~ 389 (569)
T 4azs_A 321 MEKLPGRLLSDMLAAG-----EEIDRE---KILGSLLRSLAALEKQG---FWHDDVRPWNVMVDARQHARLIDFGSIVTT 389 (569)
T ss_dssp EECCCSEEHHHHHHTT-----CCCCHH---HHHHHHHHHHHHHHHTT---CEESCCCGGGEEECTTSCEEECCCTTEESC
T ss_pred EecCCCCcHHHHHHhC-----CCCCHH---HHHHHHHHHHHHHHHCC---ceeccCchHhEEECCCCCEEEeecccCeeC
Confidence 9999999999999743 246654 58899999999999999 999999999999999999999999999876
Q ss_pred CCCCC----CCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCC
Q 006677 493 NVPAT----PSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAP 537 (635)
Q Consensus 493 ~~~~~----~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p 537 (635)
..... ..||++|||||++.+ .+..++|+||+|++++++.++..+
T Consensus 390 ~~~~~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 390 PQDCSWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp C---CCSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred CCCCccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence 54432 237889999999976 467789999999998887665444
No 253
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.93 E-value=3.6e-26 Score=263.48 Aligned_cols=189 Identities=24% Similarity=0.350 Sum_probs=157.7
Q ss_pred ccCCChhHHHHHHHHHHhCCCC-CCCCCCCCCCCCCCcceeEecCCCCeEEEEEeCCCCccCc---CCc-----------
Q 006677 23 AFADLNSDRQALLDFADAVPHL-RKLNWSSTNPICQSWVGINCTQDRTRVFGLRLPGIGLVGP---IPN----------- 87 (635)
Q Consensus 23 ~~~~~~~~~~al~~~~~~~~~~-~~~~w~~~~~~c~~w~gv~C~~~~~~v~~l~l~~~~l~g~---l~~----------- 87 (635)
+.++.++|++||++||+++.++ ...+|+.+++|| +|.||+|+ .++|+.|+|+++++.|. +|+
T Consensus 6 ~~~~~~~~~~all~~k~~~~~~~~l~~W~~~~~~C-~w~gv~C~--~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~l 82 (768)
T 3rgz_A 6 PSQSLYREIHQLISFKDVLPDKNLLPDWSSNKNPC-TFDGVTCR--DDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESL 82 (768)
T ss_dssp --CCHHHHHHHHHHHHTTCSCTTSSTTCCTTSCGG-GSTTEEEE--TTEEEEEECTTSCCCEEHHHHHHHTTTCTTCCEE
T ss_pred cccCCHHHHHHHHHHHhhCCCcccccCCCCCCCCc-CCcceEEC--CCcEEEEECCCCCcCCccCccChhHhccCccccc
Confidence 3445678999999999999544 345998666655 89999998 58999999999999987 543
Q ss_pred -----------ccccCCCCCcEEEeecCCCCCCCCC--CCCCCCcccEEeeccCccCCcCCCCcc---CCcceeeccCcc
Q 006677 88 -----------NTLGKLDALEVLSLRSNVLTGGLPS--EITSLPSLRYLYLQHNNFSGKIPSSFS---PQLVVLDLSFNS 151 (635)
Q Consensus 88 -----------~~l~~l~~L~~L~L~~n~l~g~~p~--~~~~l~~L~~L~l~~N~l~g~~p~~~~---~~L~~L~ls~N~ 151 (635)
..++++++|++|||++|.++|.+|. .+++|++|++|+|++|.+++.+|..+. ++|++|+|++|+
T Consensus 83 ~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~ 162 (768)
T 3rgz_A 83 FLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANS 162 (768)
T ss_dssp ECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSC
T ss_pred CCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCc
Confidence 3688899999999999999999998 999999999999999999999998763 789999999999
Q ss_pred CcccCCch---hhccccCCcEEcCCCcccccCCCCCCCCCcEEEeecccCcCCCCcccCCCCCCCcc
Q 006677 152 FTGNIPQS---IQNLTQLTGLSLQSNNLSGSIPNFDIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFV 215 (635)
Q Consensus 152 l~g~~p~~---~~~l~~L~~L~l~~N~l~~~~p~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~~ 215 (635)
+++..|.. +.++++|++|+|++|.+++.+|...+++|++|+|++|++++.+|. ++++++|+.+
T Consensus 163 l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L 228 (768)
T 3rgz_A 163 ISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHL 228 (768)
T ss_dssp CEEETHHHHHHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEE
T ss_pred cCCcCChhhhhhccCCCCCEEECCCCcccccCCcccCCcCCEEECcCCcCCCCCcc-cccCCCCCEE
Confidence 99888877 788888888888888888877777788888888888888877776 7777766654
No 254
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.92 E-value=5.1e-26 Score=250.29 Aligned_cols=177 Identities=16% Similarity=0.210 Sum_probs=144.9
Q ss_pred hccccccCceEEEEEEecCCCeEEEEEeecccCC---------hHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEE
Q 006677 343 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVG---------KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVY 413 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~---------~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~ 413 (635)
.++||+|+||+||+|... +..+++|+....... .+.+.+|++++.++ +||||+++..++...+..++||
T Consensus 341 ~~~LG~G~fg~Vy~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~~~~~~~~~~~~~lVm 418 (540)
T 3en9_A 341 EHLIGKGAEADIKRDSYL-DFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALV-KDFGIPAPYIFDVDLDNKRIMM 418 (540)
T ss_dssp -------CCEEEEEEECS-SCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHG-GGGTCCCCCEEEEETTTTEEEE
T ss_pred CCEEeeCCCEEEEEEEEC-CCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhc-CCCCcCceEEEEEeCCccEEEE
Confidence 568999999999999544 678888886543221 23478999999999 9999997777777888899999
Q ss_pred EeccCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCC
Q 006677 414 DYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN 493 (635)
Q Consensus 414 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~ 493 (635)
||+++|+|.++++. +..++.|++.||+|||+++ |+||||||+|||+++ .+||+|||+++...
T Consensus 419 E~~~ggsL~~~l~~-------------~~~i~~qi~~aL~~LH~~g---IiHrDiKp~NILl~~--~~kL~DFGla~~~~ 480 (540)
T 3en9_A 419 SYINGKLAKDVIED-------------NLDIAYKIGEIVGKLHKND---VIHNDLTTSNFIFDK--DLYIIDFGLGKISN 480 (540)
T ss_dssp ECCCSEEHHHHSTT-------------CTHHHHHHHHHHHHHHHTT---EECTTCCTTSEEESS--SEEECCCTTCEECC
T ss_pred ECCCCCCHHHHHHH-------------HHHHHHHHHHHHHHHHHCc---CccCCCCHHHEEECC--eEEEEECccCEECC
Confidence 99999999999963 4579999999999999998 999999999999999 99999999998876
Q ss_pred CCC-----------CCCCCCcccCcccccC--CCCCCccchhhHHHHHHHHHhCCCCCC
Q 006677 494 VPA-----------TPSRSAGYRAPEVIET--RKHSHKSDVYSFGVLLLEMLTGKAPLQ 539 (635)
Q Consensus 494 ~~~-----------~~~~~~~y~aPE~~~~--~~~~~k~Dvws~Gvvl~el~tg~~p~~ 539 (635)
... ...+|+.|||||++.. ..|+..+|+|+..+-..+.+.++.+|.
T Consensus 481 ~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 481 LDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp CHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred CccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 532 2347889999999987 568888999999999999888887774
No 255
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.92 E-value=6.4e-26 Score=255.65 Aligned_cols=185 Identities=26% Similarity=0.456 Sum_probs=162.0
Q ss_pred ChhHHHHHHHHHHhCCCCCC----------CCCCCCCCCCCCc---ceeEecCCCCeEEEEEeCCCCccCcCCcccccCC
Q 006677 27 LNSDRQALLDFADAVPHLRK----------LNWSSTNPICQSW---VGINCTQDRTRVFGLRLPGIGLVGPIPNNTLGKL 93 (635)
Q Consensus 27 ~~~~~~al~~~~~~~~~~~~----------~~w~~~~~~c~~w---~gv~C~~~~~~v~~l~l~~~~l~g~l~~~~l~~l 93 (635)
...|+.||.++++++....+ .+|+.+.++| .| .||+|+.. +||+.|+|++++++|.+|+ .|++|
T Consensus 28 ~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~~~~c-~w~~~~GV~C~~~-~~V~~L~L~~~~l~g~lp~-~l~~L 104 (636)
T 4eco_A 28 YIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFNKELD-MWGAQPGVSLNSN-GRVTGLSLEGFGASGRVPD-AIGQL 104 (636)
T ss_dssp HHHHHHHHHHHHHHTTGGGCCCCC------CCCCCSSCGG-GTTCCTTEEECTT-CCEEEEECTTSCCEEEECG-GGGGC
T ss_pred HHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCCCCcc-cccCCCCeEEcCC-CCEEEEEecCcccCCcCCh-HHhcC
Confidence 34699999999999854322 2798776665 89 99999865 8999999999999999998 89999
Q ss_pred CCCcEEEeecCC--------------------------------------------------------------------
Q 006677 94 DALEVLSLRSNV-------------------------------------------------------------------- 105 (635)
Q Consensus 94 ~~L~~L~L~~n~-------------------------------------------------------------------- 105 (635)
++|++|+|++|+
T Consensus 105 ~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l~ 184 (636)
T 4eco_A 105 TELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLK 184 (636)
T ss_dssp TTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCCCC
T ss_pred ccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccchh
Confidence 999999999984
Q ss_pred ----------CCCCCCCCCCCCCcccEEeeccCccCCc-----------------CCCCcc----CCcceeeccCccCcc
Q 006677 106 ----------LTGGLPSEITSLPSLRYLYLQHNNFSGK-----------------IPSSFS----PQLVVLDLSFNSFTG 154 (635)
Q Consensus 106 ----------l~g~~p~~~~~l~~L~~L~l~~N~l~g~-----------------~p~~~~----~~L~~L~ls~N~l~g 154 (635)
|+| ||.+|++|++|++|+|++|+|+|. +|..++ ++|++|+|++|++.|
T Consensus 185 ~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~ 263 (636)
T 4eco_A 185 DTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLT 263 (636)
T ss_dssp TTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCS
T ss_pred hhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCc
Confidence 445 899999999999999999999986 999877 789999999999999
Q ss_pred cCCchhhccccCCcEEcCCCc-ccc-cCCCC--CC------CCCcEEEeecccCcCCCCc--ccCCCCCCCccC
Q 006677 155 NIPQSIQNLTQLTGLSLQSNN-LSG-SIPNF--DI------PKLRHLNLSYNGLKGSIPS--SLQKFPNSSFVG 216 (635)
Q Consensus 155 ~~p~~~~~l~~L~~L~l~~N~-l~~-~~p~~--~l------~~L~~l~l~~N~l~g~~p~--~~~~l~~l~~~~ 216 (635)
.+|..|+++++|++|+|++|+ ++| .+|.. .+ ++|+.|+|++|+++ .+|. .++++++|..++
T Consensus 264 ~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~ 336 (636)
T 4eco_A 264 KLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLE 336 (636)
T ss_dssp SCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEE
T ss_pred cChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEe
Confidence 999999999999999999998 998 77763 43 89999999999999 8998 888888887664
No 256
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.91 E-value=9.5e-26 Score=259.37 Aligned_cols=185 Identities=26% Similarity=0.470 Sum_probs=162.5
Q ss_pred CChhHHHHHHHHHHhCCCCCCCCCCCCC-----CC-CCCc------------ceeEecCCCCeEEEEEeCCCCccCcCCc
Q 006677 26 DLNSDRQALLDFADAVPHLRKLNWSSTN-----PI-CQSW------------VGINCTQDRTRVFGLRLPGIGLVGPIPN 87 (635)
Q Consensus 26 ~~~~~~~al~~~~~~~~~~~~~~w~~~~-----~~-c~~w------------~gv~C~~~~~~v~~l~l~~~~l~g~l~~ 87 (635)
+...|+.||++||+++... +|+.++ ++ ||+| .||.|+. .+||+.|+|++++|.|.+|+
T Consensus 266 ~~~~d~~ALl~~k~~l~~~---~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~-~~~V~~L~Ls~~~L~G~ip~ 341 (876)
T 4ecn_A 266 EYIKDYKALKAIWEALDGK---NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDN-NGRVTGLSLAGFGAKGRVPD 341 (876)
T ss_dssp HHHHHHHHHHHHHHHTTGG---GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECT-TSCEEEEECTTTCCEEEECG
T ss_pred cchHHHHHHHHHHHHcCCC---CCCcCCCcccccCCccccccccccccccCcCceEecC-CCCEEEEECccCCCCCcCch
Confidence 3457999999999999654 787554 44 2599 9999986 58999999999999999998
Q ss_pred ccccCCCCCcEEEe-ecCCCCCC---------------------------------------------------------
Q 006677 88 NTLGKLDALEVLSL-RSNVLTGG--------------------------------------------------------- 109 (635)
Q Consensus 88 ~~l~~l~~L~~L~L-~~n~l~g~--------------------------------------------------------- 109 (635)
.|++|++|++|+| ++|.++|.
T Consensus 342 -~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i~~~ 420 (876)
T 4ecn_A 342 -AIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKKD 420 (876)
T ss_dssp -GGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCCCCC
T ss_pred -HHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCccccccccc
Confidence 8999999999999 77766554
Q ss_pred -------------------CCCCCCCCCcccEEeeccCccCC-----------------cCCCCcc----CCcceeeccC
Q 006677 110 -------------------LPSEITSLPSLRYLYLQHNNFSG-----------------KIPSSFS----PQLVVLDLSF 149 (635)
Q Consensus 110 -------------------~p~~~~~l~~L~~L~l~~N~l~g-----------------~~p~~~~----~~L~~L~ls~ 149 (635)
||..|++|++|++|+|++|+|+| .+|..++ ++|++|+|++
T Consensus 421 ~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~ 500 (876)
T 4ecn_A 421 SRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYN 500 (876)
T ss_dssp CCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEES
T ss_pred cccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcC
Confidence 88899999999999999999998 4999875 7899999999
Q ss_pred ccCcccCCchhhccccCCcEEcCCCc-ccc-cCCCC---------CCCCCcEEEeecccCcCCCCc--ccCCCCCCCccC
Q 006677 150 NSFTGNIPQSIQNLTQLTGLSLQSNN-LSG-SIPNF---------DIPKLRHLNLSYNGLKGSIPS--SLQKFPNSSFVG 216 (635)
Q Consensus 150 N~l~g~~p~~~~~l~~L~~L~l~~N~-l~~-~~p~~---------~l~~L~~l~l~~N~l~g~~p~--~~~~l~~l~~~~ 216 (635)
|++.|.+|..|++|++|+.|+|++|+ |+| .+|.. .+++|+.|+|++|+++ .+|. .|.++++|..++
T Consensus 501 N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~ 579 (876)
T 4ecn_A 501 CPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLD 579 (876)
T ss_dssp CTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEE
T ss_pred CCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEE
Confidence 99999999999999999999999998 998 77742 4569999999999999 8998 898888887664
No 257
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.88 E-value=3e-23 Score=214.42 Aligned_cols=186 Identities=18% Similarity=0.324 Sum_probs=152.6
Q ss_pred cCCChhHHHHHHHHHHhCC-CC-C-CCCCC----CCCCCCCCcceeEecC--------CCCeEEEEEeCCCCccCcCCcc
Q 006677 24 FADLNSDRQALLDFADAVP-HL-R-KLNWS----STNPICQSWVGINCTQ--------DRTRVFGLRLPGIGLVGPIPNN 88 (635)
Q Consensus 24 ~~~~~~~~~al~~~~~~~~-~~-~-~~~w~----~~~~~c~~w~gv~C~~--------~~~~v~~l~l~~~~l~g~l~~~ 88 (635)
.++...|++||++||.++. +. . ..+|. ...++| .|.|+.|.. ...+|+.|+|++|+++ .+|+
T Consensus 22 ~~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~-~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~- 98 (328)
T 4fcg_A 22 STALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIE-TRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPD- 98 (328)
T ss_dssp -CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSC-CSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCS-
T ss_pred cccCchHHHHHHHHHHhccCCchhhhhhhccccccccccc-ccCCcchhhhHHHHhcccccceeEEEccCCCch-hcCh-
Confidence 4566789999999999772 22 2 23783 334445 899999952 3468999999999998 8998
Q ss_pred cccCCCCCcEEEeecCCCCCCCCCCCCCCCcccEEeeccCccCCcCCCCcc--CCcceeeccCccCcccCCchhhc----
Q 006677 89 TLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQN---- 162 (635)
Q Consensus 89 ~l~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~ls~N~l~g~~p~~~~~---- 162 (635)
.++++++|++|+|++|+++ .+|..++++++|++|+|++|+++ .+|..+. ++|++|+|++|++.+.+|..++.
T Consensus 99 ~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~ 176 (328)
T 4fcg_A 99 QAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDAS 176 (328)
T ss_dssp CGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-C
T ss_pred hhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccch
Confidence 6888999999999999999 89999999999999999999999 7888877 78999999999988899887765
Q ss_pred -----cccCCcEEcCCCcccccCCCC--CCCCCcEEEeecccCcCCCCcccCCCCCCCccC
Q 006677 163 -----LTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFVG 216 (635)
Q Consensus 163 -----l~~L~~L~l~~N~l~~~~p~~--~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~~~ 216 (635)
+++|++|+|++|+|+ .+|.. .+++|+.|+|++|++++ +|..+.++++|..++
T Consensus 177 ~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~ 235 (328)
T 4fcg_A 177 GEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELD 235 (328)
T ss_dssp CCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEE
T ss_pred hhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEEE
Confidence 899999999999998 66653 78889999999999984 666788777776653
No 258
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.87 E-value=5.3e-23 Score=237.01 Aligned_cols=160 Identities=36% Similarity=0.635 Sum_probs=126.0
Q ss_pred eEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCC------------------------------------
Q 006677 70 RVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSE------------------------------------ 113 (635)
Q Consensus 70 ~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p~~------------------------------------ 113 (635)
++..|+|++|.++|.+|. .++++++|+.|+|++|.++|.+|..
T Consensus 515 ~L~~L~L~~N~l~~~~p~-~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (768)
T 3rgz_A 515 NLAILKLSNNSFSGNIPA-ELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNL 593 (768)
T ss_dssp TCCEEECCSSCCEEECCG-GGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEE
T ss_pred CCCEEECCCCcccCcCCH-HHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhccccccccccccccccccccccccc
Confidence 456667777777766666 5777777777777777776666543
Q ss_pred ----------------------------------CCCCCcccEEeeccCccCCcCCCCcc--CCcceeeccCccCcccCC
Q 006677 114 ----------------------------------ITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFNSFTGNIP 157 (635)
Q Consensus 114 ----------------------------------~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~ls~N~l~g~~p 157 (635)
++++++|++|||++|+++|.+|..++ ++|+.|+|++|+|+|.+|
T Consensus 594 ~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip 673 (768)
T 3rgz_A 594 LEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIP 673 (768)
T ss_dssp EECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCC
T ss_pred cccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCC
Confidence 33356677788888888888887777 778888888888888888
Q ss_pred chhhccccCCcEEcCCCcccccCCCC--CCCCCcEEEeecccCcCCCCcc--cCCCCCCCccCCCCCCCCCCCCCCC
Q 006677 158 QSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSS--LQKFPNSSFVGNSLLCGPPLKACFP 230 (635)
Q Consensus 158 ~~~~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~l~l~~N~l~g~~p~~--~~~l~~l~~~~n~~l~~~~l~~c~~ 230 (635)
..|+++++|+.|||++|+++|.+|.. .+++|++|||++|+|+|.||.. +..++.++|.||+.+||.|+..|.+
T Consensus 674 ~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l~~C~~ 750 (768)
T 3rgz_A 674 DEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLPRCDP 750 (768)
T ss_dssp GGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTTSCCCCS
T ss_pred hHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCchhhccCCHHHhcCCchhcCCCCcCCCC
Confidence 88888888888888888888888875 7888999999999999999864 6678888899999999999888853
No 259
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.86 E-value=3e-22 Score=202.01 Aligned_cols=151 Identities=19% Similarity=0.248 Sum_probs=119.6
Q ss_pred hccccccCceEEEEEEecCCCeEEEEEeecccC-------------------ChHHHHHHHHHHHhhcCCCceeceeEEE
Q 006677 343 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVV-------------------GKRDFEQQMEIVGRVGQHPNVVPLRAYY 403 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~-------------------~~~~~~~e~~~l~~l~~h~niv~l~~~~ 403 (635)
.+.||+|+||.||+|...+++.||+|+++.... ....+.+|++++.++ + | +++.+++
T Consensus 95 ~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l-~--~-~~v~~~~ 170 (282)
T 1zar_A 95 GKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKL-Q--G-LAVPKVY 170 (282)
T ss_dssp EEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHT-T--T-SSSCCEE
T ss_pred cCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhc-c--C-CCcCeEE
Confidence 378999999999999997789999999964321 134588999999999 4 4 5666655
Q ss_pred EeCCeeEEEEEeccCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEE
Q 006677 404 YSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCI 483 (635)
Q Consensus 404 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki 483 (635)
.. +..++||||+++|+|.+ +.. .....++.|++.||+|||+.+ |+||||||+|||++ ++.+||
T Consensus 171 ~~-~~~~lvmE~~~g~~L~~-l~~-----------~~~~~i~~qi~~~l~~lH~~g---iiHrDlkp~NILl~-~~~vkl 233 (282)
T 1zar_A 171 AW-EGNAVLMELIDAKELYR-VRV-----------ENPDEVLDMILEEVAKFYHRG---IVHGDLSQYNVLVS-EEGIWI 233 (282)
T ss_dssp EE-ETTEEEEECCCCEEGGG-CCC-----------SCHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEEE-TTEEEE
T ss_pred ec-cceEEEEEecCCCcHHH-cch-----------hhHHHHHHHHHHHHHHHHHCC---CEeCCCCHHHEEEE-CCcEEE
Confidence 43 56699999999999998 531 124469999999999999998 99999999999999 999999
Q ss_pred eecCCCCCCCCCCCCCCCCcccCcccccC----------CCCCCccchhh
Q 006677 484 SDFGLTPLMNVPATPSRSAGYRAPEVIET----------RKHSHKSDVYS 523 (635)
Q Consensus 484 ~DfGla~~~~~~~~~~~~~~y~aPE~~~~----------~~~~~k~Dvws 523 (635)
+|||+++.. ..|+|||++.. ..+...+|+|.
T Consensus 234 ~DFG~a~~~---------~~~~a~e~l~rdv~~i~~~f~~~~~~~~~~~~ 274 (282)
T 1zar_A 234 IDFPQSVEV---------GEEGWREILERDVRNIITYFSRTYRTEKDINS 274 (282)
T ss_dssp CCCTTCEET---------TSTTHHHHHHHHHHHHHHHHHHHHCCCCCHHH
T ss_pred EECCCCeEC---------CCCCHHHHHHHHHHHHHHHHHHhcCCCCChHH
Confidence 999998643 34789998854 34555666664
No 260
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.84 E-value=1.2e-20 Score=187.10 Aligned_cols=145 Identities=24% Similarity=0.223 Sum_probs=120.5
Q ss_pred eEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCcccEEeeccCccCCcCCCCcc--CCcceeec
Q 006677 70 RVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDL 147 (635)
Q Consensus 70 ~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~l 147 (635)
.++.|+|++|++++..+. .|+++++|++|+|++|+|++..|..|.++++|++|+|++|++++..|..|. ++|++|+|
T Consensus 36 ~l~~L~L~~n~l~~~~~~-~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 114 (251)
T 3m19_A 36 DTEKLDLQSTGLATLSDA-TFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYL 114 (251)
T ss_dssp TCCEEECTTSCCCCCCTT-TTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCEEEccCCCcCccCHh-HhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEc
Confidence 477889999999865544 789999999999999999987788889999999999999999976666665 78999999
Q ss_pred cCccCcccCCchhhccccCCcEEcCCCcccccCCCC--CCCCCcEEEeecccCcCCCCcccCCCCCCCcc
Q 006677 148 SFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFV 215 (635)
Q Consensus 148 s~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~~ 215 (635)
++|+|++..+..|.++++|+.|+|++|+|++..+.. .+++|+.|+|++|++++..|..+.++++|..+
T Consensus 115 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 184 (251)
T 3m19_A 115 GGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTI 184 (251)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEE
T ss_pred CCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEE
Confidence 999999777777888999999999999999766643 78899999999999997777777777766554
No 261
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.82 E-value=7.3e-20 Score=178.87 Aligned_cols=149 Identities=27% Similarity=0.266 Sum_probs=86.7
Q ss_pred CCCCCCCCCCcceeEecCCC---------CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCc
Q 006677 49 WSSTNPICQSWVGINCTQDR---------TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPS 119 (635)
Q Consensus 49 w~~~~~~c~~w~gv~C~~~~---------~~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~l~~ 119 (635)
|......| +|.+|.|+... ..++.|+|++|.+++..|. .|.++++|++|+|++|+|++..+..|.++++
T Consensus 12 ~~~~~~~C-s~~~v~c~~~~l~~ip~~~~~~L~~L~Ls~n~i~~~~~~-~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~ 89 (229)
T 3e6j_A 12 ACPSQCSC-SGTTVDCRSKRHASVPAGIPTNAQILYLHDNQITKLEPG-VFDSLINLKELYLGSNQLGALPVGVFDSLTQ 89 (229)
T ss_dssp CCCTTCEE-ETTEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCTT-TTTTCTTCCEEECCSSCCCCCCTTTTTTCTT
T ss_pred cCCCCCEE-eCCEeEccCCCcCccCCCCCCCCCEEEcCCCccCccCHH-HhhCccCCcEEECCCCCCCCcChhhcccCCC
Confidence 44455556 89999997531 2455566666666643343 5666666666666666665333344556666
Q ss_pred ccEEeeccCccCCcCCCCcc--CCcceeeccCccCcccCCchhhccccCCcEEcCCCcccccCCCC--CCCCCcEEEeec
Q 006677 120 LRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSY 195 (635)
Q Consensus 120 L~~L~l~~N~l~g~~p~~~~--~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~l~l~~ 195 (635)
|++|+|++|+|++..+..|. ++|++|+|++|+|+ .+|..+.++++|+.|+|++|+|++..+.. .+++|+.|+|++
T Consensus 90 L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 168 (229)
T 3e6j_A 90 LTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFG 168 (229)
T ss_dssp CCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTT
T ss_pred cCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeC
Confidence 66666666666644444333 55666666666666 55666666666666666666666444332 455666666666
Q ss_pred ccCcC
Q 006677 196 NGLKG 200 (635)
Q Consensus 196 N~l~g 200 (635)
|.+++
T Consensus 169 N~~~c 173 (229)
T 3e6j_A 169 NPWDC 173 (229)
T ss_dssp SCBCT
T ss_pred CCccC
Confidence 66554
No 262
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.82 E-value=4.9e-21 Score=196.55 Aligned_cols=141 Identities=23% Similarity=0.395 Sum_probs=101.0
Q ss_pred CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCC-cccEEeeccCccCCcCCCCcc-CCcceee
Q 006677 69 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLP-SLRYLYLQHNNFSGKIPSSFS-PQLVVLD 146 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~l~-~L~~L~l~~N~l~g~~p~~~~-~~L~~L~ 146 (635)
.+++.|+|++|.++|.+|. .++.+++|++|+|++|.++|.+|..+++++ +|++|+|++|+++|.+|..+. ..|++|+
T Consensus 125 ~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~L~~L~ 203 (313)
T 1ogq_A 125 KTLVTLDFSYNALSGTLPP-SISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVD 203 (313)
T ss_dssp TTCCEEECCSSEEESCCCG-GGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCSEEE
T ss_pred CCCCEEeCCCCccCCcCCh-HHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCcccEEE
Confidence 4688899999999988887 789999999999999999988998999988 899999999999888887776 3477777
Q ss_pred ccCccCcccCCchhhccccCCcEEcCCCcccccCCCC-CCCCCcEEEeecccCcCCCCcccCCCC
Q 006677 147 LSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF-DIPKLRHLNLSYNGLKGSIPSSLQKFP 210 (635)
Q Consensus 147 ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~-~l~~L~~l~l~~N~l~g~~p~~~~~l~ 210 (635)
|++|++++.+|..|.++++|+.|+|++|++++.+|.. .+++|++|+|++|+++|.+|..+.+++
T Consensus 204 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~ 268 (313)
T 1ogq_A 204 LSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLK 268 (313)
T ss_dssp CCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGGCCCCTTCCEEECCSSCCEECCCGGGGGCT
T ss_pred CcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCcccccCCCCEEECcCCcccCcCChHHhcCc
Confidence 7777777666666666666666666666665544432 344444444444444444444443333
No 263
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.80 E-value=3.2e-19 Score=171.56 Aligned_cols=146 Identities=26% Similarity=0.282 Sum_probs=116.7
Q ss_pred CCcceeEecCCC---------CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCcccEEeecc
Q 006677 57 QSWVGINCTQDR---------TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQH 127 (635)
Q Consensus 57 ~~w~gv~C~~~~---------~~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~ 127 (635)
|.|.+|.|+... .+++.|+|++|+++ .+++..++.+++|++|+|++|++++..+..|.++++|++|+|++
T Consensus 7 C~~~~v~c~~~~l~~~p~~~~~~l~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~ 85 (208)
T 2o6s_A 7 CSGTTVECYSQGRTSVPTGIPAQTTYLDLETNSLK-SLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLST 85 (208)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCC-CCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred ECCCEEEecCCCccCCCCCCCCCCcEEEcCCCccC-cCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCC
Confidence 489999997532 35888999999988 45555788899999999999999865556678899999999999
Q ss_pred CccCCcCCCCcc--CCcceeeccCccCcccCCchhhccccCCcEEcCCCcccccCCCC--CCCCCcEEEeecccCcCCCC
Q 006677 128 NNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIP 203 (635)
Q Consensus 128 N~l~g~~p~~~~--~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~l~l~~N~l~g~~p 203 (635)
|++++..+..|. ++|++|+|++|+|++..+..|.++++|+.|+|++|+|++..+.. .+++|+.|+|++|.+.+..|
T Consensus 86 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 165 (208)
T 2o6s_A 86 NQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 165 (208)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCCTT
T ss_pred CcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecCCC
Confidence 999866555554 78999999999998777777888999999999999998766643 68888889988887776443
No 264
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.79 E-value=4e-19 Score=178.24 Aligned_cols=145 Identities=25% Similarity=0.291 Sum_probs=97.8
Q ss_pred eEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCcccEEeeccCccCCcCCCCcc--CCcceeec
Q 006677 70 RVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDL 147 (635)
Q Consensus 70 ~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~l 147 (635)
.++.|+|++|+++ .+++..|+++++|++|+|++|+++...+..|.++++|++|+|++|++++..+..|. ++|++|+|
T Consensus 38 ~l~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 116 (270)
T 2o6q_A 38 DTKKLDLQSNKLS-SLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRL 116 (270)
T ss_dssp TCSEEECCSSCCS-CCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEEC
T ss_pred CCCEEECcCCCCC-eeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEEC
Confidence 3566777777776 34444677777777777777777744344456777777777777777754444444 67777777
Q ss_pred cCccCcccCCchhhccccCCcEEcCCCcccccCCCC--CCCCCcEEEeecccCcCCCCcccCCCCCCCcc
Q 006677 148 SFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFV 215 (635)
Q Consensus 148 s~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~~ 215 (635)
++|++++..|..|.++++|++|+|++|+|++..+.. .+++|+.|+|++|++++..+..|.++++|..+
T Consensus 117 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 186 (270)
T 2o6q_A 117 DRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTL 186 (270)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEE
T ss_pred CCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEE
Confidence 777777666666777777777777777777554432 66777777777777776555566666666554
No 265
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.79 E-value=1.8e-19 Score=174.92 Aligned_cols=136 Identities=20% Similarity=0.232 Sum_probs=69.3
Q ss_pred EEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCC-CCCCCCCcccEEeeccCccCCcCCCCcc--CCcceeeccCc
Q 006677 74 LRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLP-SEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFN 150 (635)
Q Consensus 74 l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p-~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~ls~N 150 (635)
+++++++++ .+|. .+. ..+++|+|++|+|++..| ..|.++++|++|+|++|+|++..|..|. ++|++|+|++|
T Consensus 16 l~~s~n~l~-~iP~-~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 91 (220)
T 2v70_A 16 VDCSNQKLN-KIPE-HIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSN 91 (220)
T ss_dssp EECCSSCCS-SCCS-CCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred eEeCCCCcc-cCcc-CCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCC
Confidence 444444544 3444 221 234555555555554433 2345555555555555555544444444 45555555555
Q ss_pred cCcccCCchhhccccCCcEEcCCCcccccCCCC--CCCCCcEEEeecccCcCCCCcccCCCCCCC
Q 006677 151 SFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNSS 213 (635)
Q Consensus 151 ~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~ 213 (635)
+|++..|..|.++++|++|+|++|+|++..|.. .+++|+.|+|++|+|++..|..|..+++|.
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 156 (220)
T 2v70_A 92 RLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLS 156 (220)
T ss_dssp CCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCC
T ss_pred ccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCC
Confidence 555544445555555555555555555544432 455555555555555555555555444443
No 266
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.78 E-value=5.5e-19 Score=171.49 Aligned_cols=133 Identities=24% Similarity=0.275 Sum_probs=74.4
Q ss_pred CCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCcccEEeeccCccCCcCCCCcc--CCcceeeccCccCcc
Q 006677 77 PGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFNSFTG 154 (635)
Q Consensus 77 ~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~ls~N~l~g 154 (635)
++++++ .+|. .+. ++|+.|+|++|+|++..|..|.++++|++|+|++|++++..|..|. ++|++|+|++|+|++
T Consensus 19 ~~~~l~-~iP~-~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~ 94 (220)
T 2v9t_B 19 RGKGLT-EIPT-NLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITE 94 (220)
T ss_dssp TTSCCS-SCCS-SCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCC
T ss_pred CCCCcC-cCCC-ccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCc
Confidence 334444 4554 222 4566666666666644444566666666666666666655555554 556666666666664
Q ss_pred cCCchhhccccCCcEEcCCCcccccCCCC--CCCCCcEEEeecccCcCCCCcccCCCCCCC
Q 006677 155 NIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNSS 213 (635)
Q Consensus 155 ~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~ 213 (635)
..+..|.++++|+.|+|++|+|++..|.. .+++|+.|+|++|+|++..+..|..+++|.
T Consensus 95 l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 155 (220)
T 2v9t_B 95 LPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQ 155 (220)
T ss_dssp CCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCC
T ss_pred cCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCC
Confidence 44444556666666666666666554443 556666666666666655554455444443
No 267
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.77 E-value=2.5e-18 Score=166.84 Aligned_cols=147 Identities=20% Similarity=0.193 Sum_probs=131.4
Q ss_pred CCcceeEecCCC---------CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCcccEEeecc
Q 006677 57 QSWVGINCTQDR---------TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQH 127 (635)
Q Consensus 57 ~~w~gv~C~~~~---------~~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~ 127 (635)
|.|..+.|++.. ..++.|+|++|++++..|.+.|..+++|++|+|++|+|++..|..|.++++|++|+|++
T Consensus 11 C~~~~l~~s~n~l~~iP~~~~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 11 CEGTTVDCSNQKLNKIPEHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred ECCCEeEeCCCCcccCccCCCCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 479999997532 25778999999999776766799999999999999999987778999999999999999
Q ss_pred CccCCcCCCCcc--CCcceeeccCccCcccCCchhhccccCCcEEcCCCcccccCCCC--CCCCCcEEEeecccCcCCCC
Q 006677 128 NNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIP 203 (635)
Q Consensus 128 N~l~g~~p~~~~--~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~l~l~~N~l~g~~p 203 (635)
|++++..|..|. ++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..|.. .+++|+.|+|++|.+++..+
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 999987777776 89999999999999999999999999999999999999987764 79999999999999987544
No 268
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.77 E-value=3.6e-18 Score=165.70 Aligned_cols=143 Identities=22% Similarity=0.229 Sum_probs=126.6
Q ss_pred CCcceeEecCCC---------CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCcccEEeecc
Q 006677 57 QSWVGINCTQDR---------TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQH 127 (635)
Q Consensus 57 ~~w~gv~C~~~~---------~~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~ 127 (635)
|.|..|.|.+.. ..++.|+|++|++++ +++..|..+++|++|+|++|+|++..|..|.++++|++|+|++
T Consensus 11 C~~~~v~c~~~~l~~iP~~l~~~l~~L~l~~n~i~~-i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~ 89 (220)
T 2v9t_B 11 CSNNIVDCRGKGLTEIPTNLPETITEIRLEQNTIKV-IPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYG 89 (220)
T ss_dssp EETTEEECTTSCCSSCCSSCCTTCCEEECCSSCCCE-ECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCS
T ss_pred ECCCEEEcCCCCcCcCCCccCcCCCEEECCCCcCCC-cCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCC
Confidence 479999997532 368999999999995 5555899999999999999999988899999999999999999
Q ss_pred CccCCcCCCCcc--CCcceeeccCccCcccCCchhhccccCCcEEcCCCcccccCCCC--CCCCCcEEEeecccCcC
Q 006677 128 NNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKG 200 (635)
Q Consensus 128 N~l~g~~p~~~~--~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~l~l~~N~l~g 200 (635)
|+|++..+..|. ++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..+.. .+++|+.|+|++|.+..
T Consensus 90 N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 90 NKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCC
Confidence 999954444454 89999999999999999999999999999999999999877753 78999999999999874
No 269
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.76 E-value=5.2e-18 Score=170.30 Aligned_cols=150 Identities=26% Similarity=0.311 Sum_probs=131.2
Q ss_pred CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCcccEEeeccCccCCcCCCCcc--CCcceee
Q 006677 69 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLD 146 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~ 146 (635)
.+++.|+|++|.+++ ++ .++.+++|++|+|++|.+++..|..|+++++|++|+|++|++++..|..|. ++|++|+
T Consensus 63 ~~L~~L~l~~n~l~~-~~--~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 139 (272)
T 3rfs_A 63 PNVRYLALGGNKLHD-IS--ALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLN 139 (272)
T ss_dssp TTCCEEECTTSCCCC-CG--GGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCcEEECCCCCCCC-ch--hhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEE
Confidence 468999999999986 44 699999999999999999987777899999999999999999977776665 7999999
Q ss_pred ccCccCcccCCchhhccccCCcEEcCCCcccccCCCC--CCCCCcEEEeecccCcCCCCcccCCCCCCCcc---CCCCCC
Q 006677 147 LSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFV---GNSLLC 221 (635)
Q Consensus 147 ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~~---~n~~l~ 221 (635)
|++|+|++..|..++++++|+.|+|++|+|++..+.. .+++|+.|+|++|++++..|..+.++++|..+ +|+..|
T Consensus 140 L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 219 (272)
T 3rfs_A 140 LAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC 219 (272)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred CCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccc
Confidence 9999999888888899999999999999999877754 78999999999999998888778888777655 454444
No 270
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.76 E-value=1.3e-18 Score=173.20 Aligned_cols=132 Identities=14% Similarity=0.160 Sum_probs=102.0
Q ss_pred hccccccCceEEEEEEe-cCCCe--EEEEEeecccCC-------------------------hHHHHHHHHHHHhhcCCC
Q 006677 343 AEVLGKGSYGTAYKAVL-EESTT--VVVKRLKEVVVG-------------------------KRDFEQQMEIVGRVGQHP 394 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~-~~~~~--vavK~l~~~~~~-------------------------~~~~~~e~~~l~~l~~h~ 394 (635)
.+.||+|+||.||+|.. .+|+. ||||+++..... ...+.+|+.++.++ +|+
T Consensus 52 ~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~ 130 (258)
T 1zth_A 52 GGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA-KEA 130 (258)
T ss_dssp EEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH-HHT
T ss_pred CCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH-HhC
Confidence 46799999999999998 67888 999987543211 12578899999999 676
Q ss_pred ce--eceeEEEEeCCeeEEEEEeccC-C----ChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH-hcCCCCceec
Q 006677 395 NV--VPLRAYYYSKDEKLLVYDYFAS-G----SLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIH-SMGGPKFTHG 466 (635)
Q Consensus 395 ni--v~l~~~~~~~~~~~lv~e~~~~-g----~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH-~~~~~~ivH~ 466 (635)
++ +..+.+ +..++||||+.+ | +|.++... .++..+..++.|++.||.||| +.+ |+||
T Consensus 131 ~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~--------~~~~~~~~i~~qi~~~l~~lH~~~g---ivHr 195 (258)
T 1zth_A 131 GVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE--------LKELDVEGIFNDVVENVKRLYQEAE---LVHA 195 (258)
T ss_dssp TCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG--------GGGSCHHHHHHHHHHHHHHHHHTSC---EECS
T ss_pred CCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc--------cChHHHHHHHHHHHHHHHHHHHHCC---EEeC
Confidence 54 333332 367899999942 4 56655431 224467789999999999999 888 9999
Q ss_pred CCCCCCeEEcCCCCeEEeecCCCCCC
Q 006677 467 NIKASNVLINQDLDGCISDFGLTPLM 492 (635)
Q Consensus 467 Dlk~~NIll~~~~~~ki~DfGla~~~ 492 (635)
||||+|||+++ .++|+|||+|...
T Consensus 196 Dlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 196 DLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp SCSTTSEEESS--SEEECCCTTCEET
T ss_pred CCCHHHEEEcC--cEEEEECcccccC
Confidence 99999999998 9999999999764
No 271
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.76 E-value=8.8e-19 Score=180.89 Aligned_cols=144 Identities=26% Similarity=0.393 Sum_probs=126.5
Q ss_pred CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCcccEEeeccCccCCcCCCCc----------
Q 006677 69 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSF---------- 138 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~---------- 138 (635)
.+++.|+|++|+++ .+|. .++++++|++|+|++|+++ .+|..|++|++|++|+|++|++.+.+|..+
T Consensus 104 ~~L~~L~L~~n~l~-~lp~-~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~ 180 (328)
T 4fcg_A 104 SHLQHMTIDAAGLM-ELPD-TMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQ 180 (328)
T ss_dssp TTCSEEEEESSCCC-CCCS-CGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEE
T ss_pred CCCCEEECCCCCcc-chhH-HHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhhc
Confidence 46888999999999 8887 7899999999999999999 889999999999999999999999999887
Q ss_pred -cCCcceeeccCccCcccCCchhhccccCCcEEcCCCcccccCCCC-CCCCCcEEEeecccCcCCCCcccCCCCCCCccC
Q 006677 139 -SPQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF-DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFVG 216 (635)
Q Consensus 139 -~~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~-~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~~~ 216 (635)
.++|++|+|++|+|+ .+|..++++++|++|+|++|++++.++.. .+++|+.|+|++|++.+.+|..+.++++|..++
T Consensus 181 ~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~ 259 (328)
T 4fcg_A 181 GLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLI 259 (328)
T ss_dssp ESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCCCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEE
T ss_pred cCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCcCchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEE
Confidence 378999999999999 88888999999999999999999755544 788999999999999999998888888877664
No 272
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.75 E-value=1.1e-17 Score=167.64 Aligned_cols=153 Identities=24% Similarity=0.286 Sum_probs=131.8
Q ss_pred CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCcccEEeeccCccCCcCCCCcc--CCcceee
Q 006677 69 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLD 146 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~ 146 (635)
.++..|+|++|.++ .+|+..|.++++|++|+|++|++++..+..|.++++|++|+|++|++++..|..|. ++|++|+
T Consensus 61 ~~L~~L~l~~n~l~-~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 139 (270)
T 2o6q_A 61 TKLRLLYLNDNKLQ-TLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLS 139 (270)
T ss_dssp TTCCEEECCSSCCS-CCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCccC-eeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEE
Confidence 47899999999998 67776789999999999999999976667789999999999999999987777765 8999999
Q ss_pred ccCccCcccCCchhhccccCCcEEcCCCcccccCCCC--CCCCCcEEEeecccCcCCCCcccCCCCCCCc---cCCCCCC
Q 006677 147 LSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSF---VGNSLLC 221 (635)
Q Consensus 147 ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~---~~n~~l~ 221 (635)
|++|+|++..+..|..+++|+.|+|++|+|++..+.. .+++|+.|+|++|++++..+..+..+++|.. .+|+..|
T Consensus 140 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 219 (270)
T 2o6q_A 140 LGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDC 219 (270)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred CCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeC
Confidence 9999999777777999999999999999999876653 7899999999999999766666777776654 4565555
Q ss_pred C
Q 006677 222 G 222 (635)
Q Consensus 222 ~ 222 (635)
.
T Consensus 220 ~ 220 (270)
T 2o6q_A 220 T 220 (270)
T ss_dssp S
T ss_pred C
Confidence 3
No 273
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.74 E-value=1.4e-17 Score=162.50 Aligned_cols=153 Identities=25% Similarity=0.338 Sum_probs=127.8
Q ss_pred cceeEecCCCCeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCcccEEeeccCccCCcCCCCc
Q 006677 59 WVGINCTQDRTRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSF 138 (635)
Q Consensus 59 w~gv~C~~~~~~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~ 138 (635)
|..-.|+. +.++.++++++ .+|. .+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|
T Consensus 14 ~~~~~Cs~-----~~v~c~~~~l~-~ip~-~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~ 84 (229)
T 3e6j_A 14 PSQCSCSG-----TTVDCRSKRHA-SVPA-GIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVF 84 (229)
T ss_dssp CTTCEEET-----TEEECTTSCCS-SCCS-CCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTT
T ss_pred CCCCEEeC-----CEeEccCCCcC-ccCC-CCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhc
Confidence 44556753 35889999988 7887 343 899999999999999889999999999999999999985555555
Q ss_pred c--CCcceeeccCccCcccCCchhhccccCCcEEcCCCcccccCCCC--CCCCCcEEEeecccCcCCCCcccCCCCCCCc
Q 006677 139 S--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSF 214 (635)
Q Consensus 139 ~--~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~ 214 (635)
. ++|++|+|++|+|++..+..|..+++|+.|+|++|+|+ .+|.. .+++|+.|+|++|+|++..+..|.++++|..
T Consensus 85 ~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 163 (229)
T 3e6j_A 85 DSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTH 163 (229)
T ss_dssp TTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred ccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCE
Confidence 5 89999999999999877778899999999999999999 56654 8999999999999999776677887777665
Q ss_pred c---CCCCCC
Q 006677 215 V---GNSLLC 221 (635)
Q Consensus 215 ~---~n~~l~ 221 (635)
+ +|+.-|
T Consensus 164 L~l~~N~~~c 173 (229)
T 3e6j_A 164 AYLFGNPWDC 173 (229)
T ss_dssp EECTTSCBCT
T ss_pred EEeeCCCccC
Confidence 4 555444
No 274
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.74 E-value=1.7e-18 Score=181.35 Aligned_cols=166 Identities=28% Similarity=0.275 Sum_probs=138.9
Q ss_pred CCcceeEecCCC---------CeEEEEEeCCCCccCcCCccccc-CCCCCcEEEeecCCCCCCCCCCCCCCCcccEEeec
Q 006677 57 QSWVGINCTQDR---------TRVFGLRLPGIGLVGPIPNNTLG-KLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQ 126 (635)
Q Consensus 57 ~~w~gv~C~~~~---------~~v~~l~l~~~~l~g~l~~~~l~-~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~ 126 (635)
|.|..|.|.... ..++.|+|++|+|++ +++..+. ++++|+.|+|++|+|++..|..|.++++|++|+|+
T Consensus 18 C~~~~l~c~~~~l~~iP~~~~~~l~~L~Ls~N~l~~-l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls 96 (361)
T 2xot_A 18 CASNILSCSKQQLPNVPQSLPSYTALLDLSHNNLSR-LRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLS 96 (361)
T ss_dssp EETTEEECCSSCCSSCCSSCCTTCSEEECCSSCCCE-ECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred ECCCEEEeCCCCcCccCccCCCCCCEEECCCCCCCc-cChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECC
Confidence 478889997531 347789999999995 5554777 99999999999999997777889999999999999
Q ss_pred cCccCCcCCCCcc--CCcceeeccCccCcccCCchhhccccCCcEEcCCCcccccCCCC-----CCCCCcEEEeecccCc
Q 006677 127 HNNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF-----DIPKLRHLNLSYNGLK 199 (635)
Q Consensus 127 ~N~l~g~~p~~~~--~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~-----~l~~L~~l~l~~N~l~ 199 (635)
+|+|++..+..|. ++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..+.. .+++|+.|+|++|+|+
T Consensus 97 ~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~ 176 (361)
T 2xot_A 97 SNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLK 176 (361)
T ss_dssp SSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCC
T ss_pred CCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCC
Confidence 9999976666665 89999999999999888999999999999999999999754432 5899999999999999
Q ss_pred CCCCcccCCCC-----CCCccCCCCCCCC
Q 006677 200 GSIPSSLQKFP-----NSSFVGNSLLCGP 223 (635)
Q Consensus 200 g~~p~~~~~l~-----~l~~~~n~~l~~~ 223 (635)
+..+..+..++ .|...+|+..|.+
T Consensus 177 ~l~~~~~~~l~~~~l~~l~l~~N~~~C~C 205 (361)
T 2xot_A 177 KLPLTDLQKLPAWVKNGLYLHNNPLECDC 205 (361)
T ss_dssp CCCHHHHHHSCHHHHTTEECCSSCEECCH
T ss_pred ccCHHHhhhccHhhcceEEecCCCccCCc
Confidence 65556666665 3567788877764
No 275
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.73 E-value=9.9e-18 Score=169.41 Aligned_cols=146 Identities=23% Similarity=0.198 Sum_probs=107.0
Q ss_pred CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCC-CCCCCCCCCCCCCcccEEeeccCccCCcCCCCcc--CCccee
Q 006677 69 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNV-LTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVL 145 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~-l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L 145 (635)
.+++.|+|++|.+++..|. .|+++++|++|+|++|. ++...|..+.++++|++|+|++|.+++..|..+. ++|++|
T Consensus 56 ~~L~~L~l~~n~l~~~~~~-~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 134 (285)
T 1ozn_A 56 RNLTILWLHSNVLARIDAA-AFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYL 134 (285)
T ss_dssp TTCCEEECCSSCCCEECTT-TTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEE
T ss_pred CCCCEEECCCCccceeCHh-hcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEE
Confidence 4677788888877754454 67788888888888886 6655577777888888888888888776666665 678888
Q ss_pred eccCccCcccCCchhhccccCCcEEcCCCcccccCCCC--CCCCCcEEEeecccCcCCCCcccCCCCCCCcc
Q 006677 146 DLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFV 215 (635)
Q Consensus 146 ~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~~ 215 (635)
+|++|++++..+..|+++++|++|+|++|+|++..+.. .+++|+.|+|++|++++..|..|.++++|..+
T Consensus 135 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 206 (285)
T 1ozn_A 135 YLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTL 206 (285)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEE
T ss_pred ECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEe
Confidence 88888887666666777788888888888777655532 67777778888877777777777776666654
No 276
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.73 E-value=4.5e-18 Score=173.77 Aligned_cols=156 Identities=24% Similarity=0.298 Sum_probs=94.5
Q ss_pred CCcceeEecCCC---------CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCC--CCCCCCCCCCcccEEee
Q 006677 57 QSWVGINCTQDR---------TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTG--GLPSEITSLPSLRYLYL 125 (635)
Q Consensus 57 ~~w~gv~C~~~~---------~~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g--~~p~~~~~l~~L~~L~l 125 (635)
|.|.+|.|+... .+++.|+|++|+++ .+|+..|+++++|++|+|++|.++. .+|..+.++++|++|+|
T Consensus 7 C~~~~l~c~~~~l~~ip~~~~~~l~~L~L~~n~l~-~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L 85 (306)
T 2z66_A 7 CSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQ-SLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDL 85 (306)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCC-CCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEEC
T ss_pred eCCCEEEcCCCCcccCCCCCCCCCCEEECCCCccC-ccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEEC
Confidence 589999998532 46899999999998 7887678999999999999999872 23445555666666666
Q ss_pred ccCccCCcCCCCcc--CCcceeeccCccCcccCC-chhhccccCCcEEcCCCcccccCCCC--CCCCCcEEEeecccCcC
Q 006677 126 QHNNFSGKIPSSFS--PQLVVLDLSFNSFTGNIP-QSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKG 200 (635)
Q Consensus 126 ~~N~l~g~~p~~~~--~~L~~L~ls~N~l~g~~p-~~~~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~l~l~~N~l~g 200 (635)
++|.++ .+|..+. ++|++|+|++|++++..+ ..+.++++|++|+|++|.+++..|.. .+++|+.|+|++|.+++
T Consensus 86 s~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 164 (306)
T 2z66_A 86 SFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQE 164 (306)
T ss_dssp CSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGG
T ss_pred CCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCcccc
Confidence 666655 3343333 445555555555553332 34455555555555555555444432 44455555555555543
Q ss_pred -CCCcccCCCCCCCc
Q 006677 201 -SIPSSLQKFPNSSF 214 (635)
Q Consensus 201 -~~p~~~~~l~~l~~ 214 (635)
.+|..+.++++|..
T Consensus 165 ~~~~~~~~~l~~L~~ 179 (306)
T 2z66_A 165 NFLPDIFTELRNLTF 179 (306)
T ss_dssp GEECSCCTTCTTCCE
T ss_pred ccchhHHhhCcCCCE
Confidence 34444444444433
No 277
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.73 E-value=3e-18 Score=162.56 Aligned_cols=127 Identities=27% Similarity=0.318 Sum_probs=110.6
Q ss_pred EEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCC-CCCCCCcccEEeeccCccCCcCCCCcc--CCcceeeccC
Q 006677 73 GLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPS-EITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSF 149 (635)
Q Consensus 73 ~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p~-~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~ls~ 149 (635)
.+++++++++ .+|. .+.. +|++|+|++|+|++..|. .|+++++|++|+|++|+|++..|..|. ++|++|+|++
T Consensus 12 ~l~~s~~~l~-~ip~-~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 12 TVDCTGRGLK-EIPR-DIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp EEECTTSCCS-SCCS-CCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred EEEcCCCCcC-cCcc-CCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 4666777885 7887 4443 899999999999965554 489999999999999999998898887 7999999999
Q ss_pred ccCcccCCchhhccccCCcEEcCCCcccccCCCC--CCCCCcEEEeecccCcCCCC
Q 006677 150 NSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIP 203 (635)
Q Consensus 150 N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~l~l~~N~l~g~~p 203 (635)
|+|++..|..|.++++|++|+|++|+|++.+|.. .+++|++|+|++|.+++..+
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 9999988888999999999999999999988864 78999999999999998765
No 278
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.72 E-value=3.5e-17 Score=165.80 Aligned_cols=143 Identities=31% Similarity=0.329 Sum_probs=96.5
Q ss_pred CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCcccEEeeccCccCCcCCCCcc--CCcceee
Q 006677 69 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLD 146 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~ 146 (635)
..++.|+|++|.+++..+. .|.++++|++|+|++|+|++ +|.. +.+++|++|+|++|+++ .+|..+. ++|++|+
T Consensus 31 ~~l~~L~L~~N~l~~~~~~-~~~~l~~L~~L~L~~n~l~~-~~~~-~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~ 106 (290)
T 1p9a_G 31 KDTTILHLSENLLYTFSLA-TLMPYTRLTQLNLDRAELTK-LQVD-GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLD 106 (290)
T ss_dssp TTCCEEECTTSCCSEEEGG-GGTTCTTCCEEECTTSCCCE-EECC-SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEE
T ss_pred CCCCEEEcCCCcCCccCHH-HhhcCCCCCEEECCCCccCc-ccCC-CCCCcCCEEECCCCcCC-cCchhhccCCCCCEEE
Confidence 3577788888887754443 67777777777777777774 4432 67777777777777776 5666554 6677777
Q ss_pred ccCccCcccCCchhhccccCCcEEcCCCcccccCCCC--CCCCCcEEEeecccCcCCCCcccCCCCCCCcc
Q 006677 147 LSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFV 215 (635)
Q Consensus 147 ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~~ 215 (635)
|++|+|++..|..|.++++|++|+|++|+|++..+.. .+++|+.|+|++|+|++..+..|.++++|..+
T Consensus 107 l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L 177 (290)
T 1p9a_G 107 VSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTL 177 (290)
T ss_dssp CCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEE
T ss_pred CCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEE
Confidence 7777777666666777777777777777777555443 56777777777777775444455556655544
No 279
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.72 E-value=2.5e-17 Score=166.38 Aligned_cols=147 Identities=24% Similarity=0.233 Sum_probs=129.5
Q ss_pred CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCcccEEeeccCc-cCCcCCCCcc--CCccee
Q 006677 69 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNN-FSGKIPSSFS--PQLVVL 145 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~N~-l~g~~p~~~~--~~L~~L 145 (635)
..++.|+|++|++++ +++..|+++++|++|+|++|.+++..|..|.++++|++|+|++|. ++...|..+. ++|++|
T Consensus 32 ~~l~~L~l~~n~i~~-~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L 110 (285)
T 1ozn_A 32 AASQRIFLHGNRISH-VPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTL 110 (285)
T ss_dssp TTCSEEECTTSCCCE-ECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEE
T ss_pred CCceEEEeeCCcCCc-cCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEE
Confidence 468999999999995 555589999999999999999998889999999999999999998 7766577776 799999
Q ss_pred eccCccCcccCCchhhccccCCcEEcCCCcccccCCCC--CCCCCcEEEeecccCcCCCCcccCCCCCCCccC
Q 006677 146 DLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFVG 216 (635)
Q Consensus 146 ~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~~~ 216 (635)
+|++|++++..|..|.++++|++|+|++|++++..+.. .+++|+.|+|++|++++..+..+.++++|..++
T Consensus 111 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 183 (285)
T 1ozn_A 111 HLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLL 183 (285)
T ss_dssp ECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred ECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEE
Confidence 99999999888999999999999999999999776653 799999999999999976666788888777653
No 280
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.72 E-value=3.4e-18 Score=189.34 Aligned_cols=157 Identities=23% Similarity=0.248 Sum_probs=136.7
Q ss_pred CCCcceeEecCC-----------CCeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCcccEEe
Q 006677 56 CQSWVGINCTQD-----------RTRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLY 124 (635)
Q Consensus 56 c~~w~gv~C~~~-----------~~~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~ 124 (635)
| .|.|+ |+.. ..+++.|+|++|++++..|. .|+++++|++|+|++|++++..|..|+++++|++|+
T Consensus 4 C-~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~-~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 80 (549)
T 2z81_A 4 C-DASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHG-DLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLD 80 (549)
T ss_dssp E-CTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECSS-TTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred C-CCCce-EECCCCccccccccCCCCccEEECcCCccCccChh-hhhcCCcccEEECCCCCcCccChhhccccccCCEEE
Confidence 5 79998 8632 13699999999999966565 799999999999999999988889999999999999
Q ss_pred eccCccCCcCCCCcc--CCcceeeccCccCcc-cCCchhhccccCCcEEcCCCcccccCCCC---CCCCCcEEEeecccC
Q 006677 125 LQHNNFSGKIPSSFS--PQLVVLDLSFNSFTG-NIPQSIQNLTQLTGLSLQSNNLSGSIPNF---DIPKLRHLNLSYNGL 198 (635)
Q Consensus 125 l~~N~l~g~~p~~~~--~~L~~L~ls~N~l~g-~~p~~~~~l~~L~~L~l~~N~l~~~~p~~---~l~~L~~l~l~~N~l 198 (635)
|++|++++..|..|. ++|++|+|++|++++ .+|..++++++|++|+|++|++.+.+|.. .+++|++|+|++|++
T Consensus 81 Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l 160 (549)
T 2z81_A 81 LSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSL 160 (549)
T ss_dssp CTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTC
T ss_pred CCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcc
Confidence 999999987776676 799999999999997 46789999999999999999966666642 789999999999999
Q ss_pred cCCCCcccCCCCCCCcc
Q 006677 199 KGSIPSSLQKFPNSSFV 215 (635)
Q Consensus 199 ~g~~p~~~~~l~~l~~~ 215 (635)
++.+|..+.++++|..+
T Consensus 161 ~~~~~~~l~~l~~L~~L 177 (549)
T 2z81_A 161 RNYQSQSLKSIRDIHHL 177 (549)
T ss_dssp CEECTTTTTTCSEEEEE
T ss_pred cccChhhhhccccCceE
Confidence 99999999888776554
No 281
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.71 E-value=5.9e-18 Score=190.44 Aligned_cols=153 Identities=20% Similarity=0.215 Sum_probs=130.3
Q ss_pred ceeEecCC---------CCeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCcccEEeeccCcc
Q 006677 60 VGINCTQD---------RTRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNF 130 (635)
Q Consensus 60 ~gv~C~~~---------~~~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~N~l 130 (635)
..|.|... ...++.|+|++|.|+ .||+..|.++++|++|||++|+|++..|..|.+|++|++|+|++|+|
T Consensus 34 ~~~~c~~~~l~~vP~~lp~~~~~LdLs~N~i~-~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l 112 (635)
T 4g8a_A 34 ITYQCMELNFYKIPDNLPFSTKNLDLSFNPLR-HLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPI 112 (635)
T ss_dssp TEEECTTSCCSSCCSSSCTTCCEEECTTSCCC-EECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred CEEECCCCCcCccCCCCCcCCCEEEeeCCCCC-CCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcC
Confidence 35778642 146899999999999 57766899999999999999999976677899999999999999999
Q ss_pred CCcCCCCcc--CCcceeeccCccCcccCCchhhccccCCcEEcCCCccccc-CCCC--CCCCCcEEEeecccCcCCCCcc
Q 006677 131 SGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGS-IPNF--DIPKLRHLNLSYNGLKGSIPSS 205 (635)
Q Consensus 131 ~g~~p~~~~--~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~-~p~~--~l~~L~~l~l~~N~l~g~~p~~ 205 (635)
++..|..|. ++|++|+|++|+|++..+..|++|++|++|+|++|+|++. +|.. .+++|++|+|++|++++..|..
T Consensus 113 ~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 192 (635)
T 4g8a_A 113 QSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTD 192 (635)
T ss_dssp CEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGG
T ss_pred CCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCcccccccccc
Confidence 966666666 7999999999999987777899999999999999999863 4543 7899999999999999888888
Q ss_pred cCCCCCCC
Q 006677 206 LQKFPNSS 213 (635)
Q Consensus 206 ~~~l~~l~ 213 (635)
+..+.++.
T Consensus 193 l~~L~~l~ 200 (635)
T 4g8a_A 193 LRVLHQMP 200 (635)
T ss_dssp GHHHHTCT
T ss_pred ccchhhhh
Confidence 87665544
No 282
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.71 E-value=2.9e-17 Score=155.68 Aligned_cols=126 Identities=26% Similarity=0.278 Sum_probs=112.1
Q ss_pred CCcceeEecCCC---------CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCcccEEeecc
Q 006677 57 QSWVGINCTQDR---------TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQH 127 (635)
Q Consensus 57 ~~w~gv~C~~~~---------~~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~ 127 (635)
|.|..+.|++.. ..++.|+|++|.+++..+.+.++.+++|++|+|++|+|++..|..|.++++|++|+|++
T Consensus 8 C~~~~l~~s~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 8 CEGTTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp EETTEEECTTSCCSSCCSCCCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred ECCCEEEcCCCCcCcCccCCCCCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 479999997532 37889999999998655544599999999999999999998899999999999999999
Q ss_pred CccCCcCCCCcc--CCcceeeccCccCcccCCchhhccccCCcEEcCCCcccccCCC
Q 006677 128 NNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPN 182 (635)
Q Consensus 128 N~l~g~~p~~~~--~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 182 (635)
|+|++..|..|. ++|++|+|++|+|++.+|..|..+++|++|+|++|.+++..+.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l 144 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHL 144 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcc
Confidence 999988887776 8999999999999999999999999999999999999987653
No 283
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.71 E-value=7e-17 Score=159.99 Aligned_cols=154 Identities=24% Similarity=0.316 Sum_probs=135.4
Q ss_pred CCCcceeEecCCCCeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCcccEEeeccCccCCcCC
Q 006677 56 CQSWVGINCTQDRTRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIP 135 (635)
Q Consensus 56 c~~w~gv~C~~~~~~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p 135 (635)
|+.|.|+.|.. ....+++++++++ .+|. .+. ++|+.|+|++|++++..|..|.++++|++|+|++|++++..|
T Consensus 4 Cp~~~gC~C~~---~~~~l~~~~~~l~-~~p~-~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 76 (251)
T 3m19_A 4 CETVTGCTCNE---GKKEVDCQGKSLD-SVPS-GIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSA 76 (251)
T ss_dssp CHHHHSSEEEG---GGTEEECTTCCCS-SCCS-CCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCT
T ss_pred CCCCCceEcCC---CCeEEecCCCCcc-ccCC-CCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCH
Confidence 55899999964 2346899999999 7887 454 689999999999998888899999999999999999998888
Q ss_pred CCcc--CCcceeeccCccCcccCCchhhccccCCcEEcCCCcccccCCCC--CCCCCcEEEeecccCcCCCCcccCCCCC
Q 006677 136 SSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPN 211 (635)
Q Consensus 136 ~~~~--~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~l~l~~N~l~g~~p~~~~~l~~ 211 (635)
..|. ++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+.. .+++|+.|+|++|+|++..|..|.++++
T Consensus 77 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 156 (251)
T 3m19_A 77 GVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTN 156 (251)
T ss_dssp TTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTT
T ss_pred hHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcC
Confidence 7776 89999999999999888888999999999999999999776653 7999999999999999777778888888
Q ss_pred CCccC
Q 006677 212 SSFVG 216 (635)
Q Consensus 212 l~~~~ 216 (635)
|..++
T Consensus 157 L~~L~ 161 (251)
T 3m19_A 157 LQTLS 161 (251)
T ss_dssp CCEEE
T ss_pred CCEEE
Confidence 87664
No 284
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.71 E-value=5.5e-18 Score=176.87 Aligned_cols=164 Identities=25% Similarity=0.267 Sum_probs=128.7
Q ss_pred CCCCCCCCCCcceeEecCC-----------CCeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCC
Q 006677 49 WSSTNPICQSWVGINCTQD-----------RTRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSL 117 (635)
Q Consensus 49 w~~~~~~c~~w~gv~C~~~-----------~~~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~l 117 (635)
|......| .|.|+ |+.. ..+++.|+|++|++++ +|+..++++++|++|+|++|++++..|..|+++
T Consensus 23 ~~~~~~~C-~~~~~-c~~~~~~l~~iP~~~~~~L~~L~l~~n~i~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 99 (353)
T 2z80_A 23 SNQASLSC-DRNGI-CKGSSGSLNSIPSGLTEAVKSLDLSNNRITY-ISNSDLQRCVNLQALVLTSNGINTIEEDSFSSL 99 (353)
T ss_dssp ----CCEE-CTTSE-EECCSTTCSSCCTTCCTTCCEEECTTSCCCE-ECTTTTTTCTTCCEEECTTSCCCEECTTTTTTC
T ss_pred CCccCCCC-CCCeE-eeCCCCCcccccccccccCcEEECCCCcCcc-cCHHHhccCCCCCEEECCCCccCccCHhhcCCC
Confidence 44344445 79988 6521 1368899999999985 555579999999999999999998778889999
Q ss_pred CcccEEeeccCccCCcCCCCcc--CCcceeeccCccCcccCCc--hhhccccCCcEEcCCCc-ccccCCCC--CCCCCcE
Q 006677 118 PSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQ--SIQNLTQLTGLSLQSNN-LSGSIPNF--DIPKLRH 190 (635)
Q Consensus 118 ~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~ls~N~l~g~~p~--~~~~l~~L~~L~l~~N~-l~~~~p~~--~l~~L~~ 190 (635)
++|++|+|++|++++..+..|. ++|++|+|++|++++ +|. .+.++++|++|++++|+ +.+..+.. .+++|+.
T Consensus 100 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~ 178 (353)
T 2z80_A 100 GSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKT-LGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEE 178 (353)
T ss_dssp TTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSS-SCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEE
T ss_pred CCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcc-cCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCE
Confidence 9999999999999954443354 789999999999994 554 78899999999999994 66554443 7889999
Q ss_pred EEeecccCcCCCCcccCCCCCCCccC
Q 006677 191 LNLSYNGLKGSIPSSLQKFPNSSFVG 216 (635)
Q Consensus 191 l~l~~N~l~g~~p~~~~~l~~l~~~~ 216 (635)
|++++|++++..|..+.++++|+.++
T Consensus 179 L~l~~n~l~~~~~~~l~~l~~L~~L~ 204 (353)
T 2z80_A 179 LEIDASDLQSYEPKSLKSIQNVSHLI 204 (353)
T ss_dssp EEEEETTCCEECTTTTTTCSEEEEEE
T ss_pred EECCCCCcCccCHHHHhccccCCeec
Confidence 99999999988898888888776653
No 285
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.71 E-value=1.5e-17 Score=186.03 Aligned_cols=171 Identities=19% Similarity=0.160 Sum_probs=137.2
Q ss_pred CCCCCCCCCCCCC---cceeEecCC----------------CCeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCC
Q 006677 46 KLNWSSTNPICQS---WVGINCTQD----------------RTRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVL 106 (635)
Q Consensus 46 ~~~w~~~~~~c~~---w~gv~C~~~----------------~~~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l 106 (635)
..+|.++.+||.. |.++.|+.. -..+..+++.++.+. .+|+..++++++|++|+|++|.+
T Consensus 9 l~~~~~~~~C~~~~~~~~c~~~~~~i~~~~~~~~~~~~~l~l~~l~~l~l~~~~l~-~lp~~~~~~l~~L~~L~L~~n~l 87 (597)
T 3oja_B 9 VKPRQPEYKCIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMR-KLPAALLDSFRQVELLNLNDLQI 87 (597)
T ss_dssp --CCCSEECCCCC--CCSEEECSCEECSSCCCCEESCSSGGGCCCSEEEESSCEES-EECTHHHHHCCCCSEEECTTSCC
T ss_pred ccCCCCCCcCcccCcCceeEecCceecccccccccCcccccCCCceEEEeeCCCCC-CcCHHHHccCCCCcEEECCCCCC
Confidence 3478877777654 655555410 024567888888887 68877789999999999999999
Q ss_pred CCCCCCCCCCCCcccEEeeccCccCCcCCCCcc--CCcceeeccCccCcccCCchhhccccCCcEEcCCCcccccCCCC-
Q 006677 107 TGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF- 183 (635)
Q Consensus 107 ~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~- 183 (635)
++..|..|+++++|++|+|++|.+++..|..|+ ++|++|+|++|+|++..+..|+++++|++|+|++|.|++.+|..
T Consensus 88 ~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 167 (597)
T 3oja_B 88 EEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTF 167 (597)
T ss_dssp CEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTT
T ss_pred CCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhh
Confidence 988888999999999999999999988887776 89999999999999666666799999999999999999888764
Q ss_pred -CCCCCcEEEeecccCcCCCCcccCCCCCCCccCC
Q 006677 184 -DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFVGN 217 (635)
Q Consensus 184 -~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~~~n 217 (635)
.+++|+.|+|++|.+++..+..+.++..|...+|
T Consensus 168 ~~l~~L~~L~L~~N~l~~~~~~~l~~L~~L~l~~n 202 (597)
T 3oja_B 168 QATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYN 202 (597)
T ss_dssp TTCTTCCEEECTTSCCSBCCGGGCTTCSEEECCSS
T ss_pred hcCCcCcEEECcCCCCCCcChhhhhhhhhhhcccC
Confidence 8999999999999999765555555555444444
No 286
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.70 E-value=1.8e-16 Score=152.20 Aligned_cols=152 Identities=24% Similarity=0.326 Sum_probs=125.4
Q ss_pred eeEecCCCCeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCcccEEeeccCccCCcCCCCcc-
Q 006677 61 GINCTQDRTRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS- 139 (635)
Q Consensus 61 gv~C~~~~~~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~- 139 (635)
+..|.. +.++..+++++ .+|.. + .++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|.
T Consensus 4 ~C~C~~-----~~v~c~~~~l~-~~p~~-~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 74 (208)
T 2o6s_A 4 RCSCSG-----TTVECYSQGRT-SVPTG-I--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNK 74 (208)
T ss_dssp TCEEET-----TEEECCSSCCS-SCCSC-C--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTT
T ss_pred CCEECC-----CEEEecCCCcc-CCCCC-C--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCC
Confidence 455643 46888999988 67763 3 56899999999999976667789999999999999999966555555
Q ss_pred -CCcceeeccCccCcccCCchhhccccCCcEEcCCCcccccCCCC--CCCCCcEEEeecccCcCCCCcccCCCCCCCcc-
Q 006677 140 -PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFV- 215 (635)
Q Consensus 140 -~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~~- 215 (635)
++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+.. .+++|+.|+|++|++++..+..+.++++|..+
T Consensus 75 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ 154 (208)
T 2o6s_A 75 LTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIW 154 (208)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEE
T ss_pred CCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEE
Confidence 89999999999999777777899999999999999999877753 78999999999999997777667777776654
Q ss_pred --CCCCCC
Q 006677 216 --GNSLLC 221 (635)
Q Consensus 216 --~n~~l~ 221 (635)
+|+..|
T Consensus 155 l~~N~~~~ 162 (208)
T 2o6s_A 155 LHDNPWDC 162 (208)
T ss_dssp CCSCCBCC
T ss_pred ecCCCeec
Confidence 555444
No 287
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.70 E-value=6.3e-17 Score=151.20 Aligned_cols=131 Identities=26% Similarity=0.307 Sum_probs=109.8
Q ss_pred CCcceeEecCCCCeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCcccEEeeccCccCCcCCC
Q 006677 57 QSWVGINCTQDRTRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPS 136 (635)
Q Consensus 57 ~~w~gv~C~~~~~~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~ 136 (635)
|+|.+|.|+. ++++ .+|.. + .++|+.|+|++|++++..+..|.++++|++|+|++|++++..+.
T Consensus 7 C~~~~l~~~~------------~~l~-~~p~~-~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 70 (177)
T 2o6r_A 7 CSGTEIRCNS------------KGLT-SVPTG-I--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDG 70 (177)
T ss_dssp EETTEEECCS------------SCCS-SCCTT-C--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTT
T ss_pred eCCCEEEecC------------CCCc-cCCCC-C--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChh
Confidence 3788777764 4555 56652 3 37899999999999976667789999999999999999976665
Q ss_pred Ccc--CCcceeeccCccCcccCCchhhccccCCcEEcCCCcccccCCCC--CCCCCcEEEeecccCcCCCC
Q 006677 137 SFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIP 203 (635)
Q Consensus 137 ~~~--~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~l~l~~N~l~g~~p 203 (635)
.|. ++|++|+|++|+|++..+..+.++++|++|+|++|+|++..+.. .+++|+.|+|++|++++..|
T Consensus 71 ~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 71 VFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp TTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred HccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 555 79999999999999877778899999999999999999766653 68999999999999998665
No 288
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.70 E-value=1.8e-17 Score=175.47 Aligned_cols=170 Identities=20% Similarity=0.178 Sum_probs=130.5
Q ss_pred CCCCCCCCCCCCcceeEecCC-------------------CCeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCC
Q 006677 47 LNWSSTNPICQSWVGINCTQD-------------------RTRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLT 107 (635)
Q Consensus 47 ~~w~~~~~~c~~w~gv~C~~~-------------------~~~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~ 107 (635)
.+|....+||+.|.++.|... -.++..|++.++.+. .+|+..+..+++|++|+|++|.++
T Consensus 4 ~~~~~~~~C~~~~~~~~c~~~~~~i~~~~~~~~~~~~~~~l~~l~~l~l~~~~l~-~l~~~~~~~l~~L~~L~L~~n~i~ 82 (390)
T 3o6n_A 4 KPRQPEYKCIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMR-KLPAALLDSFRQVELLNLNDLQIE 82 (390)
T ss_dssp ---CCEECBCC------EEEESCEECSSCCCCEESCSSGGGCCCSEEEEESCEES-EECTHHHHHCCCCSEEECTTSCCC
T ss_pred CCCCCccceehhhhhhccceeeeeeecccccccccccccccCCceEEEecCCchh-hCChhHhcccccCcEEECCCCccc
Confidence 368877777776555555310 135677899999887 688867899999999999999999
Q ss_pred CCCCCCCCCCCcccEEeeccCccCCcCCCCcc--CCcceeeccCccCcccCCchhhccccCCcEEcCCCcccccCCCC--
Q 006677 108 GGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF-- 183 (635)
Q Consensus 108 g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~-- 183 (635)
+..|..|.++++|++|+|++|++++..|..|. ++|++|+|++|+|+...+..|.++++|++|+|++|++++..|..
T Consensus 83 ~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 162 (390)
T 3o6n_A 83 EIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQ 162 (390)
T ss_dssp EECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTS
T ss_pred ccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhcc
Confidence 77777999999999999999999988787776 78999999999999544445799999999999999999877753
Q ss_pred CCCCCcEEEeecccCcCCCCcccCCCCCCCccCC
Q 006677 184 DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFVGN 217 (635)
Q Consensus 184 ~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~~~n 217 (635)
.+++|+.|+|++|++++.-...+.++..+...+|
T Consensus 163 ~l~~L~~L~l~~n~l~~~~~~~l~~L~~L~l~~n 196 (390)
T 3o6n_A 163 ATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYN 196 (390)
T ss_dssp SCTTCCEEECCSSCCSBCCGGGCTTCSEEECCSS
T ss_pred CCCCCCEEECCCCcCCccccccccccceeecccc
Confidence 7899999999999999754444444444444443
No 289
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.70 E-value=9.8e-17 Score=160.94 Aligned_cols=135 Identities=30% Similarity=0.345 Sum_probs=120.6
Q ss_pred CCeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCcccEEeeccCccCCcCCCCcc--CCccee
Q 006677 68 RTRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVL 145 (635)
Q Consensus 68 ~~~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L 145 (635)
-.+++.|+|++|.+++ +++..++++++|++|+|++|++++..|..|+++++|++|+|++|++++..|..+. ++|++|
T Consensus 84 l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 162 (272)
T 3rfs_A 84 LTNLTYLILTGNQLQS-LPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTEL 162 (272)
T ss_dssp CTTCCEEECTTSCCCC-CCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred CCCCCEEECCCCccCc-cChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEE
Confidence 3579999999999995 5554799999999999999999987777899999999999999999977776665 899999
Q ss_pred eccCccCcccCCchhhccccCCcEEcCCCcccccCCCC--CCCCCcEEEeecccCcCCCC
Q 006677 146 DLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIP 203 (635)
Q Consensus 146 ~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~l~l~~N~l~g~~p 203 (635)
+|++|+|++..+..|+++++|+.|+|++|+|++.+|.. .+++|+.|+|++|.+.+..|
T Consensus 163 ~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 222 (272)
T 3rfs_A 163 DLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 222 (272)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred ECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccccCc
Confidence 99999999888888899999999999999999887763 79999999999999987655
No 290
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.70 E-value=2.9e-17 Score=167.78 Aligned_cols=145 Identities=25% Similarity=0.266 Sum_probs=90.0
Q ss_pred CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCC-CCCCCCCcccEEeeccCccCCcCCCCcc--CCccee
Q 006677 69 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLP-SEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVL 145 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p-~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L 145 (635)
.++..|+|++|.+. .+|. .+..+++|++|+|++|++++..+ ..+.++++|++|+|++|.+++..|..+. ++|++|
T Consensus 78 ~~L~~L~Ls~n~i~-~l~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 155 (306)
T 2z66_A 78 TSLKYLDLSFNGVI-TMSS-NFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVL 155 (306)
T ss_dssp SCCCEEECCSCSEE-EEEE-EEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEE
T ss_pred cccCEEECCCCccc-cChh-hcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEE
Confidence 35666777777666 4555 46666666666666666664333 4566666666666666666665555554 566666
Q ss_pred eccCccCcc-cCCchhhccccCCcEEcCCCcccccCCCC--CCCCCcEEEeecccCcCCCCcccCCCCCCCcc
Q 006677 146 DLSFNSFTG-NIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFV 215 (635)
Q Consensus 146 ~ls~N~l~g-~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~~ 215 (635)
+|++|++++ .+|..+..+++|++|+|++|+|++..|.. .+++|+.|+|++|++++..+..+.++++|..+
T Consensus 156 ~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 228 (306)
T 2z66_A 156 KMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVL 228 (306)
T ss_dssp ECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEE
T ss_pred ECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEe
Confidence 666666665 45666666666666666666666555543 56666666666666665555455555555443
No 291
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.70 E-value=2.3e-17 Score=178.27 Aligned_cols=151 Identities=23% Similarity=0.314 Sum_probs=133.0
Q ss_pred Ccce--eEecCCC--------CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCC-CCCCCCCcccEEeec
Q 006677 58 SWVG--INCTQDR--------TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLP-SEITSLPSLRYLYLQ 126 (635)
Q Consensus 58 ~w~g--v~C~~~~--------~~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p-~~~~~l~~L~~L~l~ 126 (635)
.|.+ |.|+... .+++.|+|++|.+++..|. .|+++++|++|+|++|.+.+.+| ..|.++++|++|+|+
T Consensus 9 ~~~~~~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~~~~~-~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls 87 (455)
T 3v47_A 9 SVIGYNAICINRGLHQVPELPAHVNYVDLSLNSIAELNET-SFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLD 87 (455)
T ss_dssp EEETTEEECCSSCCSSCCCCCTTCCEEECCSSCCCEECTT-TTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECT
T ss_pred EEEccccCcCCCCcccCCCCCCccCEEEecCCccCcCChh-HhccCccccEEECcCCcccceECcccccccccCCEEeCC
Confidence 4554 8887542 4689999999999976565 89999999999999999987774 679999999999999
Q ss_pred cCccCCcCCCCcc--CCcceeeccCccCcccCCch--hhccccCCcEEcCCCcccccCCCC---CCCCCcEEEeecccCc
Q 006677 127 HNNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQS--IQNLTQLTGLSLQSNNLSGSIPNF---DIPKLRHLNLSYNGLK 199 (635)
Q Consensus 127 ~N~l~g~~p~~~~--~~L~~L~ls~N~l~g~~p~~--~~~l~~L~~L~l~~N~l~~~~p~~---~l~~L~~l~l~~N~l~ 199 (635)
+|++++..|..|. ++|++|+|++|++++.+|.. |+++++|++|+|++|++++..|.. .+++|++|+|++|+++
T Consensus 88 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~ 167 (455)
T 3v47_A 88 YNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVK 167 (455)
T ss_dssp TCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBS
T ss_pred CCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCccc
Confidence 9999988898887 89999999999999876665 999999999999999999887763 7999999999999999
Q ss_pred CCCCcccCCC
Q 006677 200 GSIPSSLQKF 209 (635)
Q Consensus 200 g~~p~~~~~l 209 (635)
+..|..+.++
T Consensus 168 ~~~~~~l~~l 177 (455)
T 3v47_A 168 SICEEDLLNF 177 (455)
T ss_dssp CCCTTTSGGG
T ss_pred ccChhhhhcc
Confidence 9989888766
No 292
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.70 E-value=4e-17 Score=177.55 Aligned_cols=157 Identities=21% Similarity=0.199 Sum_probs=136.4
Q ss_pred CcceeEecCC---------CCeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCcccEEeeccC
Q 006677 58 SWVGINCTQD---------RTRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHN 128 (635)
Q Consensus 58 ~w~gv~C~~~---------~~~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~N 128 (635)
.|..|.|... ...++.|+|++|++++..+. .|.++++|++|+|++|.+++..|..|.+|++|++|+|++|
T Consensus 12 ~~~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~~~~~-~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n 90 (477)
T 2id5_A 12 QDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQD-EFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSN 90 (477)
T ss_dssp TTTEEECCSCCCSSCCSCCCTTCSEEECCSSCCCEECTT-TTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CCCEEEeCCCCcCcCCCCCCCCCcEEECCCCccceECHh-HccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCC
Confidence 5788999753 23688999999999965554 8999999999999999999888999999999999999999
Q ss_pred ccCCcCCCCcc--CCcceeeccCccCcccCCchhhccccCCcEEcCCCcccccCCCC--CCCCCcEEEeecccCcCCCCc
Q 006677 129 NFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPS 204 (635)
Q Consensus 129 ~l~g~~p~~~~--~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~l~l~~N~l~g~~p~ 204 (635)
++++..+..|. ++|++|+|++|++++..|..|.++++|+.|+|++|.+++..|.. .+++|+.|+|++|++++..+.
T Consensus 91 ~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 170 (477)
T 2id5_A 91 RLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTE 170 (477)
T ss_dssp CCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHH
T ss_pred cCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChh
Confidence 99965555555 89999999999999999999999999999999999999877754 889999999999999976666
Q ss_pred ccCCCCCCCcc
Q 006677 205 SLQKFPNSSFV 215 (635)
Q Consensus 205 ~~~~l~~l~~~ 215 (635)
.+.++++|..+
T Consensus 171 ~l~~l~~L~~L 181 (477)
T 2id5_A 171 ALSHLHGLIVL 181 (477)
T ss_dssp HHTTCTTCCEE
T ss_pred HhcccCCCcEE
Confidence 77777777655
No 293
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.70 E-value=6.9e-18 Score=192.22 Aligned_cols=178 Identities=20% Similarity=0.260 Sum_probs=112.1
Q ss_pred CChhHHHHHHHHHHhCC---CCCCCCCCCCCCCCCCcceeEecCCCCeEEEEEeCCCCcc------------------C-
Q 006677 26 DLNSDRQALLDFADAVP---HLRKLNWSSTNPICQSWVGINCTQDRTRVFGLRLPGIGLV------------------G- 83 (635)
Q Consensus 26 ~~~~~~~al~~~~~~~~---~~~~~~w~~~~~~c~~w~gv~C~~~~~~v~~l~l~~~~l~------------------g- 83 (635)
....++++|+++..++. ......|......+.+|.++.++. .+++.|+|.++++. +
T Consensus 129 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~--~~~~~l~L~~n~~~~~~~~~l~~l~Ls~~~i~~~ 206 (727)
T 4b8c_D 129 LVDCTKQALMEMADTLTDSKTAKKQQPTGDSTPSGTATNSAVST--PLTPKIELFANGKDEANQALLQHKKLSQYSIDED 206 (727)
T ss_dssp ---CCCHHHHHHHHHHHHHHTTC---------------------------------------------------------
T ss_pred ccccchhhhhhhhhhcccccCcccCCCcCCCCccccCCCceecC--CccceEEeeCCCCCcchhhHhhcCccCcccccCc
Confidence 34678899999987762 223336765555556899988875 45666666544332 2
Q ss_pred -------cCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCcccEEeeccCccCCcCCCCcc--CCcceeeccCccCcc
Q 006677 84 -------PIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFNSFTG 154 (635)
Q Consensus 84 -------~l~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~ls~N~l~g 154 (635)
.++++.+..+.+|+.|+|++|.+. .+|..+.+|++|++|+|++|.|+ .+|..|. ++|++|+|++|+|+
T Consensus 207 ~~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~- 283 (727)
T 4b8c_D 207 DDIENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT- 283 (727)
T ss_dssp ---------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-
T ss_pred cccccceecChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-
Confidence 134446888899999999999998 78888889999999999999999 8888876 78999999999999
Q ss_pred cCCchhhccccCCcEEcCCCcccccCCCC--CCCCCcEEEeecccCcCCCCcccCCC
Q 006677 155 NIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKF 209 (635)
Q Consensus 155 ~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~l~l~~N~l~g~~p~~~~~l 209 (635)
.+|..|++|++|++|+|++|.|+ .+|.. .+++|+.|+|++|.|+|.+|..+..+
T Consensus 284 ~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~ 339 (727)
T 4b8c_D 284 SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEK 339 (727)
T ss_dssp SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHH
T ss_pred ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhc
Confidence 88999999999999999999997 55653 78899999999999998888777543
No 294
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.70 E-value=4.6e-17 Score=175.79 Aligned_cols=157 Identities=22% Similarity=0.168 Sum_probs=115.2
Q ss_pred CcceeEecCCC---------CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCcccEEeeccC
Q 006677 58 SWVGINCTQDR---------TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHN 128 (635)
Q Consensus 58 ~w~gv~C~~~~---------~~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~N 128 (635)
.|..|.|.+.. .+++.|+|++|++++..|. .|+++++|++|+|++|+|++..|..|.++++|++|+|++|
T Consensus 55 ~~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~-~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n 133 (452)
T 3zyi_A 55 QFSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQAD-TFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDN 133 (452)
T ss_dssp SSCEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECTT-TTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CCcEEEECCCCcCccCCCCCCCccEEECcCCcCceECHH-HcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCC
Confidence 46788887532 4689999999999965555 8999999999999999999888899999999999999999
Q ss_pred ccCCcCCCCcc--CCcceeeccCccCcccCCchhhc-------------------------cccCCcEEcCCCcccccCC
Q 006677 129 NFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQN-------------------------LTQLTGLSLQSNNLSGSIP 181 (635)
Q Consensus 129 ~l~g~~p~~~~--~~L~~L~ls~N~l~g~~p~~~~~-------------------------l~~L~~L~l~~N~l~~~~p 181 (635)
++++..+..|. ++|++|+|++|+|++..+..|.+ +++|++|+|++|+|++...
T Consensus 134 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~ 213 (452)
T 3zyi_A 134 WLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDMPN 213 (452)
T ss_dssp CCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSCCC
T ss_pred cCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccccc
Confidence 99966555565 78999999999888655545544 4455555555555553321
Q ss_pred CCCCCCCcEEEeecccCcCCCCcccCCCCCCCcc
Q 006677 182 NFDIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFV 215 (635)
Q Consensus 182 ~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~~ 215 (635)
...+++|+.|+|++|++++..|..|.++++|..+
T Consensus 214 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 247 (452)
T 3zyi_A 214 LTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKL 247 (452)
T ss_dssp CTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEE
T ss_pred ccccccccEEECcCCcCcccCcccccCccCCCEE
Confidence 1255666666666666666666666666665544
No 295
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.69 E-value=5.8e-17 Score=164.11 Aligned_cols=149 Identities=29% Similarity=0.326 Sum_probs=109.2
Q ss_pred CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCcccEEeeccCccCCcCCCCcc--CCcceee
Q 006677 69 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLD 146 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~ 146 (635)
.+++.|+|++|.+++ ++. .+.+++|++|+|++|+|+ .+|..+.++++|++|+|++|+|++..|..|. ++|++|+
T Consensus 55 ~~L~~L~L~~n~l~~-~~~--~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~ 130 (290)
T 1p9a_G 55 TRLTQLNLDRAELTK-LQV--DGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELY 130 (290)
T ss_dssp TTCCEEECTTSCCCE-EEC--CSCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEE
T ss_pred CCCCEEECCCCccCc-ccC--CCCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEE
Confidence 467788888888774 554 367888888888888887 6777788888888888888888866666665 6788888
Q ss_pred ccCccCcccCCchhhccccCCcEEcCCCcccccCCCC--CCCCCcEEEeecccCcCCCCcccCCCCCCCc---cCCCCCC
Q 006677 147 LSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSF---VGNSLLC 221 (635)
Q Consensus 147 ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~---~~n~~l~ 221 (635)
|++|+|++..+..|..+++|+.|+|++|+|++..+.. .+++|+.|+|++|+|+ .+|..+..+.+|.. .+|+..|
T Consensus 131 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C 209 (290)
T 1p9a_G 131 LKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLC 209 (290)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCC
T ss_pred CCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccC
Confidence 8888888666666778888888888888888554443 5778888888888887 67766665555443 3555554
Q ss_pred C
Q 006677 222 G 222 (635)
Q Consensus 222 ~ 222 (635)
.
T Consensus 210 ~ 210 (290)
T 1p9a_G 210 N 210 (290)
T ss_dssp S
T ss_pred c
Confidence 3
No 296
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.69 E-value=8.2e-18 Score=189.40 Aligned_cols=132 Identities=17% Similarity=0.314 Sum_probs=117.8
Q ss_pred CccCcCCcccccCCCCCcEEEeecCCCCCC-----------------CCCCCC--CCCcccEEeeccCccCCcCCCCcc-
Q 006677 80 GLVGPIPNNTLGKLDALEVLSLRSNVLTGG-----------------LPSEIT--SLPSLRYLYLQHNNFSGKIPSSFS- 139 (635)
Q Consensus 80 ~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~-----------------~p~~~~--~l~~L~~L~l~~N~l~g~~p~~~~- 139 (635)
+++| ||+ .++++++|++|+|++|.|+|. +|..++ +|++|++|+|++|++.|.+|..|+
T Consensus 194 ~l~~-ip~-~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~ 271 (636)
T 4eco_A 194 NITF-VSK-AVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKA 271 (636)
T ss_dssp EEEE-ECG-GGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTT
T ss_pred CCcc-CCH-HHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhc
Confidence 4556 887 799999999999999999986 999999 999999999999999999999887
Q ss_pred -CCcceeeccCcc-Ccc-cCCchhhcc------ccCCcEEcCCCcccccCCC--C--CCCCCcEEEeecccCcCCCCccc
Q 006677 140 -PQLVVLDLSFNS-FTG-NIPQSIQNL------TQLTGLSLQSNNLSGSIPN--F--DIPKLRHLNLSYNGLKGSIPSSL 206 (635)
Q Consensus 140 -~~L~~L~ls~N~-l~g-~~p~~~~~l------~~L~~L~l~~N~l~~~~p~--~--~l~~L~~l~l~~N~l~g~~p~~~ 206 (635)
++|++|+|++|+ |+| .+|..++++ ++|++|+|++|+++ .+|. . .+++|+.|+|++|+++|.+| .+
T Consensus 272 l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~ 349 (636)
T 4eco_A 272 LPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AF 349 (636)
T ss_dssp CSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CC
T ss_pred CCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hh
Confidence 799999999998 998 899999887 99999999999999 7776 3 88999999999999999999 88
Q ss_pred CCCCCCCcc
Q 006677 207 QKFPNSSFV 215 (635)
Q Consensus 207 ~~l~~l~~~ 215 (635)
.++++|..+
T Consensus 350 ~~l~~L~~L 358 (636)
T 4eco_A 350 GSEIKLASL 358 (636)
T ss_dssp EEEEEESEE
T ss_pred CCCCCCCEE
Confidence 777766655
No 297
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.69 E-value=1.2e-16 Score=160.56 Aligned_cols=152 Identities=22% Similarity=0.271 Sum_probs=84.4
Q ss_pred eEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCcccEEeeccCccCCcCCCCcc--CCcceeec
Q 006677 70 RVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDL 147 (635)
Q Consensus 70 ~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~l 147 (635)
+++.|+|++|.+++ +++..++++++|++|+|++|.+++..|..|.++++|++|++++|++++..+..+. ++|++|+|
T Consensus 53 ~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 131 (276)
T 2z62_A 53 ELQVLDLSRCEIQT-IEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNV 131 (276)
T ss_dssp TCSEEECTTCCCCE-ECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEEC
T ss_pred CCcEEECCCCcCCc-cCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEEC
Confidence 45566666666653 3333556666666666666666655555566666666666666666544443443 45556666
Q ss_pred cCccCccc-CCchhhccccCCcEEcCCCcccccC----------------------------CCC-CCCCCcEEEeeccc
Q 006677 148 SFNSFTGN-IPQSIQNLTQLTGLSLQSNNLSGSI----------------------------PNF-DIPKLRHLNLSYNG 197 (635)
Q Consensus 148 s~N~l~g~-~p~~~~~l~~L~~L~l~~N~l~~~~----------------------------p~~-~l~~L~~l~l~~N~ 197 (635)
++|++++. +|..|.++++|+.|+|++|++++.. +.. ...+|+.|+|++|+
T Consensus 132 ~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~~~L~~L~L~~n~ 211 (276)
T 2z62_A 132 AHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLKELALDTNQ 211 (276)
T ss_dssp CSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSCSCCEEEEECCSSC
T ss_pred cCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCcccccCccccCCCcccEEECCCCc
Confidence 66655542 4555555555555555555555432 222 33467777777777
Q ss_pred CcCCCCcccCCCCCCC---ccCCCCCCC
Q 006677 198 LKGSIPSSLQKFPNSS---FVGNSLLCG 222 (635)
Q Consensus 198 l~g~~p~~~~~l~~l~---~~~n~~l~~ 222 (635)
+++..+..+.++++|. ..+|+..|.
T Consensus 212 l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 239 (276)
T 2z62_A 212 LKSVPDGIFDRLTSLQKIWLHTNPWDCS 239 (276)
T ss_dssp CSCCCTTTTTTCCSCCEEECCSSCBCCC
T ss_pred eeecCHhHhcccccccEEEccCCccccc
Confidence 7755555555555544 334544443
No 298
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.68 E-value=9e-17 Score=166.14 Aligned_cols=157 Identities=21% Similarity=0.284 Sum_probs=127.0
Q ss_pred CCcceeEecCCC---------CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCcccEEeecc
Q 006677 57 QSWVGINCTQDR---------TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQH 127 (635)
Q Consensus 57 ~~w~gv~C~~~~---------~~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~ 127 (635)
|.|..+.|+... .+++.|+|++|++++ +++..|+++++|++|+|++|++++..|..|+++++|++|+|++
T Consensus 33 c~l~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~i~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 111 (332)
T 2ft3_A 33 CHLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDISE-LRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISK 111 (332)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCE-ECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCS
T ss_pred ccCCEEECCCCCccccCCCCCCCCeEEECCCCcCCc-cCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCC
Confidence 479999997532 368999999999995 4444899999999999999999988899999999999999999
Q ss_pred CccCCcCCCCccCCcceeeccCccCcccCCchhhccccCCcEEcCCCcccc--cCCCC--CCCCCcEEEeecccCcCCCC
Q 006677 128 NNFSGKIPSSFSPQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSG--SIPNF--DIPKLRHLNLSYNGLKGSIP 203 (635)
Q Consensus 128 N~l~g~~p~~~~~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~--~~p~~--~l~~L~~l~l~~N~l~g~~p 203 (635)
|+++ .+|..+.++|++|+|++|++++..+..|.++++|+.|++++|.++. ..|.. .+ +|+.|++++|++++ +|
T Consensus 112 n~l~-~l~~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~-l~ 188 (332)
T 2ft3_A 112 NHLV-EIPPNLPSSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG-IP 188 (332)
T ss_dssp SCCC-SCCSSCCTTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-CC
T ss_pred CcCC-ccCccccccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc-cC
Confidence 9999 7888888999999999999997777789999999999999999963 44432 33 77777777777774 44
Q ss_pred ccc-CCCCCCCccCC
Q 006677 204 SSL-QKFPNSSFVGN 217 (635)
Q Consensus 204 ~~~-~~l~~l~~~~n 217 (635)
..+ .++..|...+|
T Consensus 189 ~~~~~~L~~L~l~~n 203 (332)
T 2ft3_A 189 KDLPETLNELHLDHN 203 (332)
T ss_dssp SSSCSSCSCCBCCSS
T ss_pred ccccCCCCEEECCCC
Confidence 433 34444444444
No 299
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.68 E-value=5e-17 Score=163.40 Aligned_cols=143 Identities=21% Similarity=0.212 Sum_probs=125.4
Q ss_pred eEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCcccEEeeccCccCCcCCCCcc--CCcceeec
Q 006677 70 RVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDL 147 (635)
Q Consensus 70 ~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~l 147 (635)
.++.|+|++|++++ +++..|+++++|++|+|++|++++..+..|.++++|++|+|++|++++..|..|. ++|++|++
T Consensus 29 ~l~~L~ls~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 107 (276)
T 2z62_A 29 STKNLDLSFNPLRH-LGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (276)
T ss_dssp TCCEEECTTCCCCE-ECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred CccEEECCCCcccc-cCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEEC
Confidence 58999999999995 4444799999999999999999977777899999999999999999987777776 79999999
Q ss_pred cCccCcccCCchhhccccCCcEEcCCCccccc-CCCC--CCCCCcEEEeecccCcCCCCcccCCCCCCC
Q 006677 148 SFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGS-IPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNSS 213 (635)
Q Consensus 148 s~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~-~p~~--~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~ 213 (635)
++|++++..+..++++++|++|+|++|++++. +|.. .+++|+.|+|++|++++..+..+..++++.
T Consensus 108 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 176 (276)
T 2z62_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMP 176 (276)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCT
T ss_pred CCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhcc
Confidence 99999987777899999999999999999873 4654 789999999999999987777776665554
No 300
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.68 E-value=1.6e-16 Score=164.15 Aligned_cols=142 Identities=20% Similarity=0.249 Sum_probs=117.8
Q ss_pred CCcceeEecCC---------CCeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCcccEEeecc
Q 006677 57 QSWVGINCTQD---------RTRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQH 127 (635)
Q Consensus 57 ~~w~gv~C~~~---------~~~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~ 127 (635)
|.|+.+.|++. ...++.|+|++|++++ +++..|+++++|++|+|++|++++..|..|+++++|++|+|++
T Consensus 31 c~l~~l~~~~~~l~~lp~~~~~~l~~L~L~~n~i~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~ 109 (330)
T 1xku_A 31 CHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITE-IKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSK 109 (330)
T ss_dssp EETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCC-BCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CCCeEEEecCCCccccCccCCCCCeEEECCCCcCCE-eChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCC
Confidence 47999999742 2468889999999995 5555799999999999999999988899999999999999999
Q ss_pred CccCCcCCCCccCCcceeeccCccCcccCCchhhccccCCcEEcCCCcccc--cCCCC--CCCCCcEEEeecccCcC
Q 006677 128 NNFSGKIPSSFSPQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSG--SIPNF--DIPKLRHLNLSYNGLKG 200 (635)
Q Consensus 128 N~l~g~~p~~~~~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~--~~p~~--~l~~L~~l~l~~N~l~g 200 (635)
|+++ .+|..+.++|++|++++|++++..+..|.++++|+.|+|++|.++. ..+.. .+++|+.|++++|+++.
T Consensus 110 n~l~-~l~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~ 185 (330)
T 1xku_A 110 NQLK-ELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT 185 (330)
T ss_dssp SCCS-BCCSSCCTTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS
T ss_pred CcCC-ccChhhcccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcccc
Confidence 9999 7888888899999999999997777778888888888888888863 33332 56677777777776663
No 301
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.68 E-value=5.6e-17 Score=175.15 Aligned_cols=129 Identities=22% Similarity=0.264 Sum_probs=113.3
Q ss_pred CCCcEEEeecCCCCCCCCCCCCCCCcccEEeeccCccCCcCCCCcc--CCcceeeccCccCcccCCchhhccccCCcEEc
Q 006677 94 DALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSL 171 (635)
Q Consensus 94 ~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l 171 (635)
++|+.|+|++|++++.+|..|+++++|++|+|++|++++..|..|. ++|++|+|++|++++..|..|.++++|++|+|
T Consensus 275 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 354 (455)
T 3v47_A 275 SGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDL 354 (455)
T ss_dssp SCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEEC
T ss_pred cCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEEC
Confidence 6899999999999988999999999999999999999988888887 79999999999999888999999999999999
Q ss_pred CCCcccccCCCC--CCCCCcEEEeecccCcCCCCcccCCCCCCCcc---CCCCCCC
Q 006677 172 QSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFV---GNSLLCG 222 (635)
Q Consensus 172 ~~N~l~~~~p~~--~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~~---~n~~l~~ 222 (635)
++|++++..|.. .+++|++|+|++|++++..+..+.++++|..+ +|+.-|.
T Consensus 355 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 410 (455)
T 3v47_A 355 SYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 410 (455)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred CCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccC
Confidence 999999887764 89999999999999997666667777776654 5555444
No 302
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.68 E-value=4.9e-17 Score=182.27 Aligned_cols=152 Identities=20% Similarity=0.229 Sum_probs=133.3
Q ss_pred ceeEecCC---------CCeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCcccEEeeccCcc
Q 006677 60 VGINCTQD---------RTRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNF 130 (635)
Q Consensus 60 ~gv~C~~~---------~~~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~N~l 130 (635)
..|.|.+. ..+++.|+|++|.+++..+. .|+++++|++|+|++|++++..|..|+++++|++|+|++|++
T Consensus 14 ~~~~c~~~~l~~ip~~~~~~l~~L~Ls~n~l~~~~~~-~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l 92 (606)
T 3vq2_A 14 ITYQCMDQKLSKVPDDIPSSTKNIDLSFNPLKILKSY-SFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPI 92 (606)
T ss_dssp TEEECTTSCCSSCCTTSCTTCCEEECTTSCCCEECTT-TTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred CceEccCCCcccCCCCCCCCcCEEECCCCCcCEeChh-hccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcc
Confidence 35777642 25789999999999965554 799999999999999999988888999999999999999999
Q ss_pred CCcCCCCcc--CCcceeeccCccCcccCCchhhccccCCcEEcCCCcccc-cCCCC--CCCCCcEEEeecccCcCCCCcc
Q 006677 131 SGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSG-SIPNF--DIPKLRHLNLSYNGLKGSIPSS 205 (635)
Q Consensus 131 ~g~~p~~~~--~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~-~~p~~--~l~~L~~l~l~~N~l~g~~p~~ 205 (635)
++..|..|. ++|++|+|++|++++..|..|+++++|++|+|++|++++ .+|.. .+++|++|+|++|++++..|..
T Consensus 93 ~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~ 172 (606)
T 3vq2_A 93 QSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVND 172 (606)
T ss_dssp CCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTT
T ss_pred cccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhh
Confidence 988899887 899999999999998887899999999999999999986 56764 8999999999999999888887
Q ss_pred cCCCCCC
Q 006677 206 LQKFPNS 212 (635)
Q Consensus 206 ~~~l~~l 212 (635)
++.++++
T Consensus 173 ~~~l~~L 179 (606)
T 3vq2_A 173 LQFLREN 179 (606)
T ss_dssp THHHHHC
T ss_pred hhhhhcc
Confidence 7766544
No 303
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.67 E-value=6.1e-17 Score=149.89 Aligned_cols=132 Identities=25% Similarity=0.229 Sum_probs=109.6
Q ss_pred CeEEEEEeCCCCcc-CcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCcccEEeeccCccCCcCCCCcc--CCccee
Q 006677 69 TRVFGLRLPGIGLV-GPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVL 145 (635)
Q Consensus 69 ~~v~~l~l~~~~l~-g~l~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L 145 (635)
.+++.|+|++|+++ |.+|. .+..+++|++|+|++|.+++. ..+.++++|++|+|++|++++.+|..+. ++|++|
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~-~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEG-LTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSS-CCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred ccCCEEECCCCCCChhhHHH-HHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 46888999999998 78887 688999999999999999865 7889999999999999999987777664 789999
Q ss_pred eccCccCcccC-CchhhccccCCcEEcCCCcccccCC----C-CCCCCCcEEEeecccCcCCCCc
Q 006677 146 DLSFNSFTGNI-PQSIQNLTQLTGLSLQSNNLSGSIP----N-FDIPKLRHLNLSYNGLKGSIPS 204 (635)
Q Consensus 146 ~ls~N~l~g~~-p~~~~~l~~L~~L~l~~N~l~~~~p----~-~~l~~L~~l~l~~N~l~g~~p~ 204 (635)
+|++|+|++.. +..+..+++|+.|+|++|.+++..+ . ..+++|++|++++|.+. .+|.
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~-~~~~ 164 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ-EAPD 164 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC-BCCS
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh-hccc
Confidence 99999998542 2788899999999999999987665 1 27889999999999887 4554
No 304
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.67 E-value=7.4e-17 Score=180.86 Aligned_cols=154 Identities=19% Similarity=0.108 Sum_probs=137.1
Q ss_pred cceeEecCC---------CCeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCcccEEeeccCc
Q 006677 59 WVGINCTQD---------RTRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNN 129 (635)
Q Consensus 59 w~gv~C~~~---------~~~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~N~ 129 (635)
+..|.|.+. ...++.|+|++|.+++..|. .|+++++|++|+|++|++++..|..|+++++|++|+|++|+
T Consensus 14 ~~~~~c~~~~l~~iP~~l~~~l~~L~Ls~n~i~~~~~~-~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~ 92 (606)
T 3t6q_A 14 NKTYNCENLGLNEIPGTLPNSTECLEFSFNVLPTIQNT-TFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANP 92 (606)
T ss_dssp TTEEECTTSCCSSCCTTSCTTCCEEECTTCCCSEECTT-TSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred CceEECCCCCcccCcCCCCCcCcEEEccCCccCcCChh-HhccCccceEEECCCCccceeChhhccCccccCeeeCCCCc
Confidence 566888643 24689999999999965554 89999999999999999998889999999999999999999
Q ss_pred cCCcCCCCcc--CCcceeeccCccCcccCCchhhccccCCcEEcCCCccccc-CCCC-CCCCCcEEEeecccCcCCCCcc
Q 006677 130 FSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGS-IPNF-DIPKLRHLNLSYNGLKGSIPSS 205 (635)
Q Consensus 130 l~g~~p~~~~--~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~-~p~~-~l~~L~~l~l~~N~l~g~~p~~ 205 (635)
+++..|..|. ++|++|+|++|++++..|..++++++|++|+|++|++++. +|.. .+++|+.|+|++|++++..|..
T Consensus 93 l~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 172 (606)
T 3t6q_A 93 LIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKED 172 (606)
T ss_dssp CSEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHH
T ss_pred ccccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhh
Confidence 9988898887 8999999999999987788999999999999999999974 4544 7999999999999999888888
Q ss_pred cCCCCCCC
Q 006677 206 LQKFPNSS 213 (635)
Q Consensus 206 ~~~l~~l~ 213 (635)
+.++++|.
T Consensus 173 ~~~l~~L~ 180 (606)
T 3t6q_A 173 MSSLQQAT 180 (606)
T ss_dssp HHTTTTCC
T ss_pred hhhhcccc
Confidence 88888776
No 305
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.67 E-value=9e-17 Score=176.78 Aligned_cols=145 Identities=26% Similarity=0.370 Sum_probs=122.2
Q ss_pred CCCCCCCCCC----Cccee-EecCCCCeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCcccE
Q 006677 48 NWSSTNPICQ----SWVGI-NCTQDRTRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRY 122 (635)
Q Consensus 48 ~w~~~~~~c~----~w~gv-~C~~~~~~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~ 122 (635)
+|..+..+|. .|.|+ .|.. .+++.|+|++|+|++ ||.. + +++|++|+|++|+|+ .+| ..+++|++
T Consensus 35 ~W~~~~~~~~~~~~~~~~l~~C~~--~~L~~L~Ls~n~L~~-lp~~-l--~~~L~~L~Ls~N~l~-~ip---~~l~~L~~ 104 (571)
T 3cvr_A 35 KWEKQALPGENRNEAVSLLKECLI--NQFSELQLNRLNLSS-LPDN-L--PPQITVLEITQNALI-SLP---ELPASLEY 104 (571)
T ss_dssp HHHTTCCTTCCHHHHHHHHHHHHH--TTCSEEECCSSCCSC-CCSC-C--CTTCSEEECCSSCCS-CCC---CCCTTCCE
T ss_pred HHhccCCccccccchhhhcccccc--CCccEEEeCCCCCCc-cCHh-H--cCCCCEEECcCCCCc-ccc---cccCCCCE
Confidence 5766666663 49999 7864 479999999999996 8873 5 389999999999999 788 56899999
Q ss_pred EeeccCccCCcCCCCccCCcceeeccCccCcccCCchhhccccCCcEEcCCCcccccCCCCCCCCCcEEEeecccCcCCC
Q 006677 123 LYLQHNNFSGKIPSSFSPQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNFDIPKLRHLNLSYNGLKGSI 202 (635)
Q Consensus 123 L~l~~N~l~g~~p~~~~~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~l~~L~~l~l~~N~l~g~~ 202 (635)
|+|++|+|++ +|. +..+|++|+|++|+|++ +|. .+++|+.|+|++|+|++ +|. .+++|+.|+|++|+|++ +
T Consensus 105 L~Ls~N~l~~-ip~-l~~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~-~l~~L~~L~Ls~N~L~~-l 175 (571)
T 3cvr_A 105 LDACDNRLST-LPE-LPASLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE-LPTSLEVLSVRNNQLTF-L 175 (571)
T ss_dssp EECCSSCCSC-CCC-CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CCTTCCEEECCSSCCSC-C
T ss_pred EEccCCCCCC-cch-hhcCCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC-cCCCcCEEECCCCCCCC-c
Confidence 9999999997 888 77899999999999997 777 68999999999999997 665 78899999999999997 7
Q ss_pred CcccCCCCCCCc
Q 006677 203 PSSLQKFPNSSF 214 (635)
Q Consensus 203 p~~~~~l~~l~~ 214 (635)
|. |. ++|.+
T Consensus 176 p~-l~--~~L~~ 184 (571)
T 3cvr_A 176 PE-LP--ESLEA 184 (571)
T ss_dssp CC-CC--TTCCE
T ss_pred ch-hh--CCCCE
Confidence 77 54 44443
No 306
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.67 E-value=7.2e-17 Score=180.94 Aligned_cols=144 Identities=24% Similarity=0.211 Sum_probs=83.3
Q ss_pred eEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCC-CCCCCCCcccEEeeccCccCCcCCCCcc--CCcceee
Q 006677 70 RVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLP-SEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLD 146 (635)
Q Consensus 70 ~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p-~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~ 146 (635)
++..|+|++|.+++ +|. .+..+++|+.|+|++|++++..| ..+.++++|++|+|++|.+++.+|..+. ++|++|+
T Consensus 377 ~L~~L~L~~n~l~~-~~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 454 (606)
T 3vq2_A 377 SLRHLDLSFNGAII-MSA-NFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLK 454 (606)
T ss_dssp CCCEEECCSCSEEE-ECC-CCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEE
T ss_pred cccEeECCCCcccc-chh-hccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEE
Confidence 45666666666653 443 46666666666666666665555 4556666666666666666655555554 5566666
Q ss_pred ccCccCcc-cCCchhhccccCCcEEcCCCcccccCCCC--CCCCCcEEEeecccCcCCCCcccCCCCCCCcc
Q 006677 147 LSFNSFTG-NIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFV 215 (635)
Q Consensus 147 ls~N~l~g-~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~~ 215 (635)
|++|++++ .+|..|+++++|+.|+|++|++++.+|.. .+++|+.|+|++|++++.+|..+.++++|..+
T Consensus 455 l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 526 (606)
T 3vq2_A 455 MAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTL 526 (606)
T ss_dssp CTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEE
T ss_pred CCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEE
Confidence 66666655 25555566666666666666665555442 55556666666666655555555555554443
No 307
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.67 E-value=1.1e-16 Score=186.32 Aligned_cols=136 Identities=28% Similarity=0.303 Sum_probs=118.2
Q ss_pred ccCCCCCcEEEeecCCCCCCCCC-CCCCCCcccEEeeccCccCC-----cCCCCcc--CCcceeeccCccCcccCCchhh
Q 006677 90 LGKLDALEVLSLRSNVLTGGLPS-EITSLPSLRYLYLQHNNFSG-----KIPSSFS--PQLVVLDLSFNSFTGNIPQSIQ 161 (635)
Q Consensus 90 l~~l~~L~~L~L~~n~l~g~~p~-~~~~l~~L~~L~l~~N~l~g-----~~p~~~~--~~L~~L~ls~N~l~g~~p~~~~ 161 (635)
++++++|+.|+|++|++++..+. .+..+++|+.|+|++|.+++ ..|..|. ++|++|+|++|+|++..|..|.
T Consensus 422 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 501 (844)
T 3j0a_A 422 LLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFS 501 (844)
T ss_dssp HTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSS
T ss_pred hhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHcc
Confidence 55889999999999999965443 46778999999999999983 3344454 7899999999999999999999
Q ss_pred ccccCCcEEcCCCcccccCCCCCCCCCcEEEeecccCcCCCCcccCCCCCCCccCCCCCCCCCC
Q 006677 162 NLTQLTGLSLQSNNLSGSIPNFDIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFVGNSLLCGPPL 225 (635)
Q Consensus 162 ~l~~L~~L~l~~N~l~~~~p~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~~~n~~l~~~~l 225 (635)
++++|+.|+|++|+|++.+|....++|+.|+|++|+|++.+|..+.++..+.+.+|+..|.+++
T Consensus 502 ~l~~L~~L~Ls~N~l~~l~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~L~~l~l~~Np~~C~c~~ 565 (844)
T 3j0a_A 502 HLTALRGLSLNSNRLTVLSHNDLPANLEILDISRNQLLAPNPDVFVSLSVLDITHNKFICECEL 565 (844)
T ss_dssp SCCSCSEEEEESCCCSSCCCCCCCSCCCEEEEEEECCCCCCSCCCSSCCEEEEEEECCCCSSSC
T ss_pred chhhhheeECCCCCCCccChhhhhccccEEECCCCcCCCCChhHhCCcCEEEecCCCccccccc
Confidence 9999999999999999877766558999999999999999999999999999999999986653
No 308
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.66 E-value=1.9e-16 Score=150.11 Aligned_cols=123 Identities=30% Similarity=0.379 Sum_probs=108.7
Q ss_pred EEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCcccEEeeccCccCCcCCCCcc--CCcceeeccCc
Q 006677 73 GLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFN 150 (635)
Q Consensus 73 ~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~ls~N 150 (635)
.+++++++++ .+|.+ + .++|++|+|++|+|+ .+|..|.++++|+.|+|++|+|++..|..|. ++|++|+|++|
T Consensus 14 ~l~~~~~~l~-~ip~~-~--~~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 14 VVRCSNKGLK-VLPKG-I--PRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp EEECTTSCCS-SCCSC-C--CTTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred EEEcCCCCCC-cCCCC-C--CCCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 4667778887 78873 4 368999999999999 8999999999999999999999987777776 89999999999
Q ss_pred cCcccCCchhhccccCCcEEcCCCcccccCCCC--CCCCCcEEEeecccCcC
Q 006677 151 SFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKG 200 (635)
Q Consensus 151 ~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~l~l~~N~l~g 200 (635)
+|++..|..|.++++|+.|+|++|+|++..+.. .+++|+.|+|++|.+..
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 999888889999999999999999999766643 78999999999999874
No 309
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.66 E-value=6.5e-17 Score=158.93 Aligned_cols=141 Identities=16% Similarity=0.196 Sum_probs=112.7
Q ss_pred CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCC-CCCCCCCCCCCCCcccEEeecc-CccCCcCCCCcc--CCcce
Q 006677 69 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNV-LTGGLPSEITSLPSLRYLYLQH-NNFSGKIPSSFS--PQLVV 144 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~-l~g~~p~~~~~l~~L~~L~l~~-N~l~g~~p~~~~--~~L~~ 144 (635)
..++.|+|++|+++ .+|+..|+++++|++|+|++|+ +++..+..|.++++|++|+|++ |++++..+..|. ++|++
T Consensus 31 ~~l~~L~l~~n~l~-~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~ 109 (239)
T 2xwt_C 31 PSTQTLKLIETHLR-TIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKF 109 (239)
T ss_dssp TTCCEEEEESCCCS-EECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCE
T ss_pred CcccEEEEeCCcce-EECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCE
Confidence 46889999999998 4565579999999999999997 8855556899999999999998 999966556665 78999
Q ss_pred eeccCccCcccCCchhhccccCC---cEEcCCC-cccccCCCC--CCCCCc-EEEeecccCcCCCCcccCCCCCCC
Q 006677 145 LDLSFNSFTGNIPQSIQNLTQLT---GLSLQSN-NLSGSIPNF--DIPKLR-HLNLSYNGLKGSIPSSLQKFPNSS 213 (635)
Q Consensus 145 L~ls~N~l~g~~p~~~~~l~~L~---~L~l~~N-~l~~~~p~~--~l~~L~-~l~l~~N~l~g~~p~~~~~l~~l~ 213 (635)
|+|++|++++ +|. |.++++|+ .|++++| ++++..+.. .+++|+ .|+|++|+++ .+|......++|.
T Consensus 110 L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~~~L~ 182 (239)
T 2xwt_C 110 LGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNGTKLD 182 (239)
T ss_dssp EEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTTCEEE
T ss_pred EeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCCCCCC
Confidence 9999999986 776 88888888 9999999 888666543 788899 9999999988 5665433224443
No 310
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.66 E-value=4.3e-17 Score=167.05 Aligned_cols=133 Identities=23% Similarity=0.288 Sum_probs=70.0
Q ss_pred eEEEEEeCCCCccCcCCcccc-cCCCCCcEEEeecCCCCCCCCCCCCCC-----CcccEEeeccCccCCcCCCCcc--CC
Q 006677 70 RVFGLRLPGIGLVGPIPNNTL-GKLDALEVLSLRSNVLTGGLPSEITSL-----PSLRYLYLQHNNFSGKIPSSFS--PQ 141 (635)
Q Consensus 70 ~v~~l~l~~~~l~g~l~~~~l-~~l~~L~~L~L~~n~l~g~~p~~~~~l-----~~L~~L~l~~N~l~g~~p~~~~--~~ 141 (635)
+++.|+|++|+++|.+|...+ +.+++|++|+|++|++++. |..++++ ++|++|+|++|++++..|..|. ++
T Consensus 96 ~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~ 174 (312)
T 1wwl_A 96 GLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPA 174 (312)
T ss_dssp CCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSS
T ss_pred CccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCC
Confidence 455555555555555555221 5555555566655555544 5555554 5555555555555555545554 45
Q ss_pred cceeeccCccCccc--CCchh--hccccCCcEEcCCCccccc--CCCC---CCCCCcEEEeecccCcCCCC
Q 006677 142 LVVLDLSFNSFTGN--IPQSI--QNLTQLTGLSLQSNNLSGS--IPNF---DIPKLRHLNLSYNGLKGSIP 203 (635)
Q Consensus 142 L~~L~ls~N~l~g~--~p~~~--~~l~~L~~L~l~~N~l~~~--~p~~---~l~~L~~l~l~~N~l~g~~p 203 (635)
|++|+|++|++.|. +|..+ +++++|++|+|++|+|++. ++.. .+++|+.|+|++|++++.+|
T Consensus 175 L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 245 (312)
T 1wwl_A 175 LSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAG 245 (312)
T ss_dssp CCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCC
T ss_pred CCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccc
Confidence 55555555555544 22233 5555555555555555521 1111 44555566666665555443
No 311
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.65 E-value=4.6e-17 Score=187.34 Aligned_cols=144 Identities=22% Similarity=0.372 Sum_probs=131.7
Q ss_pred CeEEEEEeCCCCccC-----------------cCCccccc--CCCCCcEEEeecCCCCCCCCCCCCCCCcccEEeeccCc
Q 006677 69 TRVFGLRLPGIGLVG-----------------PIPNNTLG--KLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNN 129 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g-----------------~l~~~~l~--~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~N~ 129 (635)
.+++.|+|++|.++| .+|+ .++ ++++|++|+|++|++.|.+|..|++|++|+.|+|++|+
T Consensus 448 ~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~-~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~ 526 (876)
T 4ecn_A 448 TKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENE-ELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNR 526 (876)
T ss_dssp TTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTS-CCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCT
T ss_pred CCCCEEECcCCcCCCCcccccccccccccccccCCh-hhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCC
Confidence 578999999999998 4998 677 99999999999999999999999999999999999998
Q ss_pred -cCC-cCCCCcc---------CCcceeeccCccCcccCCc--hhhccccCCcEEcCCCcccccCCCC-CCCCCcEEEeec
Q 006677 130 -FSG-KIPSSFS---------PQLVVLDLSFNSFTGNIPQ--SIQNLTQLTGLSLQSNNLSGSIPNF-DIPKLRHLNLSY 195 (635)
Q Consensus 130 -l~g-~~p~~~~---------~~L~~L~ls~N~l~g~~p~--~~~~l~~L~~L~l~~N~l~~~~p~~-~l~~L~~l~l~~ 195 (635)
|+| .+|..++ ++|++|+|++|+|+ .+|. .|+++++|+.|+|++|+|+ .+|.. .+++|+.|+|++
T Consensus 527 ~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp~~~~L~~L~~L~Ls~ 604 (876)
T 4ecn_A 527 GISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLEAFGTNVKLTDLKLDY 604 (876)
T ss_dssp TSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCCCCCTTSEESEEECCS
T ss_pred CcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cchhhcCCCcceEEECcC
Confidence 998 8998765 38999999999999 8999 9999999999999999999 78755 889999999999
Q ss_pred ccCcCCCCcccCCCCC-CCccC
Q 006677 196 NGLKGSIPSSLQKFPN-SSFVG 216 (635)
Q Consensus 196 N~l~g~~p~~~~~l~~-l~~~~ 216 (635)
|+++ .+|..+.++++ |..++
T Consensus 605 N~l~-~lp~~l~~l~~~L~~L~ 625 (876)
T 4ecn_A 605 NQIE-EIPEDFCAFTDQVEGLG 625 (876)
T ss_dssp SCCS-CCCTTSCEECTTCCEEE
T ss_pred Cccc-cchHHHhhccccCCEEE
Confidence 9999 89998988877 76553
No 312
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.65 E-value=1.6e-16 Score=184.95 Aligned_cols=149 Identities=20% Similarity=0.207 Sum_probs=130.4
Q ss_pred CcceeEecCCCCeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCC-CCCCCCCCcccEEeeccCccCCcCCC
Q 006677 58 SWVGINCTQDRTRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGL-PSEITSLPSLRYLYLQHNNFSGKIPS 136 (635)
Q Consensus 58 ~w~gv~C~~~~~~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~-p~~~~~l~~L~~L~l~~N~l~g~~p~ 136 (635)
+|+.|-+ ...+++.|+|++|.+++..|. .|+++++|++|+|++|.+.+.+ |..|.+|++|++|+|++|.+++..|.
T Consensus 15 ~L~~vP~--lp~~l~~LdLs~N~i~~i~~~-~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~ 91 (844)
T 3j0a_A 15 NLTQVPQ--VLNTTERLLLSFNYIRTVTAS-SFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPD 91 (844)
T ss_dssp CSSCCCS--SCTTCCEEEEESCCCCEECSS-SCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTT
T ss_pred CCCCCCC--CCCCcCEEECCCCcCCccChh-HCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHh
Confidence 5777766 346799999999999966565 7999999999999999887777 78899999999999999999988899
Q ss_pred Ccc--CCcceeeccCccCcccCCch--hhccccCCcEEcCCCcccccCCC---CCCCCCcEEEeecccCcCCCCcccCCC
Q 006677 137 SFS--PQLVVLDLSFNSFTGNIPQS--IQNLTQLTGLSLQSNNLSGSIPN---FDIPKLRHLNLSYNGLKGSIPSSLQKF 209 (635)
Q Consensus 137 ~~~--~~L~~L~ls~N~l~g~~p~~--~~~l~~L~~L~l~~N~l~~~~p~---~~l~~L~~l~l~~N~l~g~~p~~~~~l 209 (635)
.|. ++|++|+|++|++++.+|.. |+++++|++|+|++|.+++..+. ..+++|+.|+|++|.+++..|..+..+
T Consensus 92 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l 171 (844)
T 3j0a_A 92 AFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPL 171 (844)
T ss_dssp SSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHH
T ss_pred HccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccc
Confidence 887 79999999999999877776 99999999999999999987654 289999999999999998888877654
No 313
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.65 E-value=4.4e-16 Score=167.48 Aligned_cols=154 Identities=27% Similarity=0.271 Sum_probs=112.8
Q ss_pred CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCC-------------------------CCcccEE
Q 006677 69 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITS-------------------------LPSLRYL 123 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~-------------------------l~~L~~L 123 (635)
.++..|+|++|+++ .+|+..|..+++|++|+|++|.|++..+..|.+ +++|++|
T Consensus 112 ~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L 190 (440)
T 3zyj_A 112 ANLNTLELFDNRLT-TIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYL 190 (440)
T ss_dssp SSCCEEECCSSCCS-SCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEE
T ss_pred ccCCEEECCCCcCC-eeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCee
Confidence 56888899998888 566557888888888888888887444434444 5555555
Q ss_pred eeccCccCCcCCCCcc-CCcceeeccCccCcccCCchhhccccCCcEEcCCCcccccCCCC--CCCCCcEEEeecccCcC
Q 006677 124 YLQHNNFSGKIPSSFS-PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKG 200 (635)
Q Consensus 124 ~l~~N~l~g~~p~~~~-~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~l~l~~N~l~g 200 (635)
+|++|+++ .+|.-.. ++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..+.. .+++|+.|+|++|+|++
T Consensus 191 ~L~~n~l~-~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 269 (440)
T 3zyj_A 191 NLAMCNLR-EIPNLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTL 269 (440)
T ss_dssp ECTTSCCS-SCCCCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCC
T ss_pred cCCCCcCc-cccccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCc
Confidence 55555555 3332111 57888888888888888888888999999999999988776654 78899999999999997
Q ss_pred CCCcccCCCCCCC---ccCCCCCCCCC
Q 006677 201 SIPSSLQKFPNSS---FVGNSLLCGPP 224 (635)
Q Consensus 201 ~~p~~~~~l~~l~---~~~n~~l~~~~ 224 (635)
..+..|.++++|. ..+|+..|.+.
T Consensus 270 ~~~~~~~~l~~L~~L~L~~Np~~CdC~ 296 (440)
T 3zyj_A 270 LPHDLFTPLHHLERIHLHHNPWNCNCD 296 (440)
T ss_dssp CCTTTTSSCTTCCEEECCSSCEECSST
T ss_pred cChhHhccccCCCEEEcCCCCccCCCC
Confidence 7776677666654 45777777654
No 314
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.65 E-value=2.3e-16 Score=150.15 Aligned_cols=139 Identities=19% Similarity=0.364 Sum_probs=119.4
Q ss_pred CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCcccEEeeccCccCCcCCCCcc--CCcceee
Q 006677 69 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLD 146 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~ 146 (635)
.+++.|+|++|+++ .+| .+..+++|++|+|++|.++ .++.+.++++|++|+|++|++++..|..+. ++|++|+
T Consensus 44 ~~L~~L~l~~n~i~-~l~--~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~ 118 (197)
T 4ezg_A 44 NSLTYITLANINVT-DLT--GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLD 118 (197)
T ss_dssp HTCCEEEEESSCCS-CCT--TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEE
T ss_pred CCccEEeccCCCcc-ChH--HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEE
Confidence 35888999999998 777 3999999999999999776 334899999999999999999987888887 8999999
Q ss_pred ccCccCcccCCchhhccccCCcEEcCCCc-ccccCCCC-CCCCCcEEEeecccCcCCCCcccCCCCCCCcc
Q 006677 147 LSFNSFTGNIPQSIQNLTQLTGLSLQSNN-LSGSIPNF-DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFV 215 (635)
Q Consensus 147 ls~N~l~g~~p~~~~~l~~L~~L~l~~N~-l~~~~p~~-~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~~ 215 (635)
|++|++++..|..+.++++|++|+|++|. ++ .+|.. .+++|+.|++++|++++ ++ .+.++++|..+
T Consensus 119 Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L 186 (197)
T 4ezg_A 119 ISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIMPLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQL 186 (197)
T ss_dssp CCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCGGGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEE
T ss_pred ecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccHhhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEE
Confidence 99999999899999999999999999998 55 45544 88999999999999996 44 66677766654
No 315
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.64 E-value=6.3e-17 Score=176.10 Aligned_cols=147 Identities=20% Similarity=0.188 Sum_probs=94.4
Q ss_pred CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCcccEEeeccCccCCcCCCCcc---CCccee
Q 006677 69 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS---PQLVVL 145 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~---~~L~~L 145 (635)
..+..|+|++|.+++..+. .+++|+.|+|++|.|++..|..++++++|++|+|++|.+++.+|..+. ++|++|
T Consensus 99 ~~L~~L~L~~N~l~~~~~~----~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L 174 (487)
T 3oja_A 99 PSIETLHAANNNISRVSCS----RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHL 174 (487)
T ss_dssp TTCCEEECCSSCCCCEEEC----CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEE
T ss_pred CCcCEEECcCCcCCCCCcc----ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEE
Confidence 3456667777776643322 346677777777777766666777777777777777777776666654 567777
Q ss_pred eccCccCcccCCchhhccccCCcEEcCCCcccccCCCC-CCCCCcEEEeecccCcCCCCcccCCCCCCC---ccCCCCCC
Q 006677 146 DLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF-DIPKLRHLNLSYNGLKGSIPSSLQKFPNSS---FVGNSLLC 221 (635)
Q Consensus 146 ~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~-~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~---~~~n~~l~ 221 (635)
+|++|+|++..+ +..+++|+.|+|++|.|++.+|.. .+++|+.|+|++|.|++ +|..+..+++|. +.+|+..|
T Consensus 175 ~Ls~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c 251 (487)
T 3oja_A 175 NLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHC 251 (487)
T ss_dssp ECTTSCCCEEEC--CCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCH
T ss_pred ecCCCccccccc--cccCCCCCEEECCCCCCCCCCHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcC
Confidence 777777775522 334677777777777777655554 56777777777777774 565565555443 33555544
Q ss_pred C
Q 006677 222 G 222 (635)
Q Consensus 222 ~ 222 (635)
+
T Consensus 252 ~ 252 (487)
T 3oja_A 252 G 252 (487)
T ss_dssp H
T ss_pred c
Confidence 3
No 316
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.64 E-value=7.8e-16 Score=166.12 Aligned_cols=154 Identities=25% Similarity=0.233 Sum_probs=117.2
Q ss_pred CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCC-------------------------CCCCCcccEE
Q 006677 69 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSE-------------------------ITSLPSLRYL 123 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p~~-------------------------~~~l~~L~~L 123 (635)
.++..|+|++|.++ .+|+..|.++++|++|+|++|+|++..+.. |.++++|++|
T Consensus 123 ~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L 201 (452)
T 3zyi_A 123 ASLNTLELFDNWLT-VIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYL 201 (452)
T ss_dssp TTCCEEECCSSCCS-BCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEE
T ss_pred ccCCEEECCCCcCC-ccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEE
Confidence 46888999999988 566657888889999999888887443334 4455566666
Q ss_pred eeccCccCCcCCCCcc-CCcceeeccCccCcccCCchhhccccCCcEEcCCCcccccCCCC--CCCCCcEEEeecccCcC
Q 006677 124 YLQHNNFSGKIPSSFS-PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKG 200 (635)
Q Consensus 124 ~l~~N~l~g~~p~~~~-~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~l~l~~N~l~g 200 (635)
+|++|++++ +|.-.. ++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..|.. .+++|+.|+|++|+|++
T Consensus 202 ~L~~n~l~~-~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 280 (452)
T 3zyi_A 202 NLGMCNIKD-MPNLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSS 280 (452)
T ss_dssp ECTTSCCSS-CCCCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSC
T ss_pred ECCCCcccc-cccccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCc
Confidence 666666663 332111 67889999999999888999999999999999999999877764 78999999999999997
Q ss_pred CCCcccCCCCCCC---ccCCCCCCCCC
Q 006677 201 SIPSSLQKFPNSS---FVGNSLLCGPP 224 (635)
Q Consensus 201 ~~p~~~~~l~~l~---~~~n~~l~~~~ 224 (635)
..+..+..+++|. ..+|+..|.+.
T Consensus 281 ~~~~~~~~l~~L~~L~L~~Np~~CdC~ 307 (452)
T 3zyi_A 281 LPHDLFTPLRYLVELHLHHNPWNCDCD 307 (452)
T ss_dssp CCTTSSTTCTTCCEEECCSSCEECSTT
T ss_pred cChHHhccccCCCEEEccCCCcCCCCC
Confidence 7777777666654 55787777654
No 317
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.64 E-value=1.2e-16 Score=144.86 Aligned_cols=123 Identities=26% Similarity=0.283 Sum_probs=78.7
Q ss_pred CeEEEEEeCCCCcc-CcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCcccEEeeccCccCCcCCCCcc--CCccee
Q 006677 69 TRVFGLRLPGIGLV-GPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVL 145 (635)
Q Consensus 69 ~~v~~l~l~~~~l~-g~l~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L 145 (635)
.+++.|++++|+++ |.+|. .++.+++|++|+|++|.+++. ..++++++|++|+|++|.+++.+|..+. ++|++|
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~-~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEG-LTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCS-CCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred ccCeEEEccCCcCChhHHHH-HHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 34666777777776 66665 566777777777777777644 5666777777777777777665555543 566777
Q ss_pred eccCccCccc-CCchhhccccCCcEEcCCCcccccCC---C-C-CCCCCcEEEee
Q 006677 146 DLSFNSFTGN-IPQSIQNLTQLTGLSLQSNNLSGSIP---N-F-DIPKLRHLNLS 194 (635)
Q Consensus 146 ~ls~N~l~g~-~p~~~~~l~~L~~L~l~~N~l~~~~p---~-~-~l~~L~~l~l~ 194 (635)
+|++|++++. .|..+.++++|++|++++|.+++..+ . . .+++|+.|+++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 7777766642 33566666666666666666665444 1 1 56666666654
No 318
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.63 E-value=1.4e-16 Score=163.01 Aligned_cols=147 Identities=22% Similarity=0.229 Sum_probs=109.1
Q ss_pred CeEEEEEeCCCCccCcCCc---ccccCCCCCcEEEeecCCCCCCCCCCCCCCCcccEEeeccCccCCc--CCCCc--c--
Q 006677 69 TRVFGLRLPGIGLVGPIPN---NTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGK--IPSSF--S-- 139 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~l~~---~~l~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~N~l~g~--~p~~~--~-- 139 (635)
.++..|+|++|.+++..+. ..+..+++|++|+|++|++++..|..|+++++|++|+|++|++.+. ++... .
T Consensus 117 ~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l 196 (310)
T 4glp_A 117 LALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKF 196 (310)
T ss_dssp BCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSS
T ss_pred CCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcC
Confidence 4688899999999876552 2456788999999999999888888899999999999999988752 22221 2
Q ss_pred CCcceeeccCccCcccCCc----hhhccccCCcEEcCCCcccccCCCC--C---CCCCcEEEeecccCcCCCCcccC-CC
Q 006677 140 PQLVVLDLSFNSFTGNIPQ----SIQNLTQLTGLSLQSNNLSGSIPNF--D---IPKLRHLNLSYNGLKGSIPSSLQ-KF 209 (635)
Q Consensus 140 ~~L~~L~ls~N~l~g~~p~----~~~~l~~L~~L~l~~N~l~~~~p~~--~---l~~L~~l~l~~N~l~g~~p~~~~-~l 209 (635)
++|++|+|++|+|+ .+|. .++++++|++|+|++|+|++..|.. . +++|++|+|++|+|+ .+|..+. ++
T Consensus 197 ~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~~~L 274 (310)
T 4glp_A 197 PAIQNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLPAKL 274 (310)
T ss_dssp CCCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCCSCC
T ss_pred CCCCEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhcCCC
Confidence 68899999999987 3333 2577888999999999998876642 3 368999999999988 6676653 34
Q ss_pred CCCCccCC
Q 006677 210 PNSSFVGN 217 (635)
Q Consensus 210 ~~l~~~~n 217 (635)
..|...+|
T Consensus 275 ~~L~Ls~N 282 (310)
T 4glp_A 275 RVLDLSSN 282 (310)
T ss_dssp SCEECCSC
T ss_pred CEEECCCC
Confidence 44444344
No 319
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.63 E-value=2e-16 Score=172.18 Aligned_cols=97 Identities=21% Similarity=0.216 Sum_probs=60.2
Q ss_pred CcccEEeeccCccCCcCCCCcc--CCcceeeccCccCcccCCchhh-ccccCCcEEcCCCcccccCCCCCCCCCcEEEee
Q 006677 118 PSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQ-NLTQLTGLSLQSNNLSGSIPNFDIPKLRHLNLS 194 (635)
Q Consensus 118 ~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~ls~N~l~g~~p~~~~-~l~~L~~L~l~~N~l~~~~p~~~l~~L~~l~l~ 194 (635)
++|+.|+|++|.+++..|..+. ++|++|+|++|+|++.+|..+. ++++|+.|+|++|.|++..+...+++|+.|+|+
T Consensus 120 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~~~~~l~~L~~L~Ls 199 (487)
T 3oja_A 120 QGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKGQVVFAKLKTLDLS 199 (487)
T ss_dssp SSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEECCCCCTTCCEEECC
T ss_pred CCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccccccccCCCCCEEECC
Confidence 3444555555555554455544 5666777777777766666665 567777777777777665444567777777777
Q ss_pred cccCcCCCCcccCCCCCCCcc
Q 006677 195 YNGLKGSIPSSLQKFPNSSFV 215 (635)
Q Consensus 195 ~N~l~g~~p~~~~~l~~l~~~ 215 (635)
+|+|++ +|..+..+++|..+
T Consensus 200 ~N~l~~-~~~~~~~l~~L~~L 219 (487)
T 3oja_A 200 SNKLAF-MGPEFQSAAGVTWI 219 (487)
T ss_dssp SSCCCE-ECGGGGGGTTCSEE
T ss_pred CCCCCC-CCHhHcCCCCccEE
Confidence 777775 34446666665554
No 320
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.63 E-value=2.5e-16 Score=176.48 Aligned_cols=145 Identities=23% Similarity=0.241 Sum_probs=118.3
Q ss_pred CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCC-CCCCCcccEEeeccCccCCcCCCCcc--CCccee
Q 006677 69 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSE-ITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVL 145 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p~~-~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L 145 (635)
.++..|+|++|.+.+..|. .++.+++|+.|+|++|.+++..|.. +.++++|++|+|++|.+++..|..+. ++|++|
T Consensus 376 ~~L~~L~l~~n~l~~~~~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 454 (606)
T 3t6q_A 376 SHLQSLNLSYNEPLSLKTE-AFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHL 454 (606)
T ss_dssp TTCCEEECCSCSCEEECTT-TTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEE
T ss_pred CCCCEEECCCCcCCcCCHH-HhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEE
Confidence 4688899999988866665 7888899999999999988776654 88889999999999998888887775 788888
Q ss_pred eccCccCccc---CCchhhccccCCcEEcCCCcccccCCCC--CCCCCcEEEeecccCcCCCCcccCCCCCCCcc
Q 006677 146 DLSFNSFTGN---IPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFV 215 (635)
Q Consensus 146 ~ls~N~l~g~---~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~~ 215 (635)
+|++|++++. .+..+..+++|++|+|++|++++.+|.. .+++|+.|+|++|++++..|..+.+++.| ++
T Consensus 455 ~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L 528 (606)
T 3t6q_A 455 NLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YL 528 (606)
T ss_dssp ECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EE
T ss_pred ECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EE
Confidence 8888888863 3356888888888888888888877664 78888888888888888888888888777 44
No 321
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.63 E-value=7.7e-16 Score=158.93 Aligned_cols=144 Identities=25% Similarity=0.357 Sum_probs=122.3
Q ss_pred eEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCC--CCCCCCCCCCCcccEEeeccCccCCcCCCCccCCcceeec
Q 006677 70 RVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLT--GGLPSEITSLPSLRYLYLQHNNFSGKIPSSFSPQLVVLDL 147 (635)
Q Consensus 70 ~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~--g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~L~~L~l 147 (635)
.+..|+|++|.+++ +++..+.++++|++|+|++|.++ +..|..+.++++|++|++++|.++ .+|..+.++|++|+|
T Consensus 122 ~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~-~l~~~~~~~L~~L~l 199 (330)
T 1xku_A 122 TLQELRVHENEITK-VRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGLPPSLTELHL 199 (330)
T ss_dssp TCCEEECCSSCCCB-BCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-SCCSSCCTTCSEEEC
T ss_pred cccEEECCCCcccc-cCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc-cCCccccccCCEEEC
Confidence 45566666666663 44446888999999999999886 367788999999999999999998 578887799999999
Q ss_pred cCccCcccCCchhhccccCCcEEcCCCcccccCCCC--CCCCCcEEEeecccCcCCCCcccCCCCCCCccC
Q 006677 148 SFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFVG 216 (635)
Q Consensus 148 s~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~~~ 216 (635)
++|++++..|..|.++++|+.|+|++|++++..+.. .+++|+.|+|++|+++ .+|..+..+++|..++
T Consensus 200 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~ 269 (330)
T 1xku_A 200 DGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVY 269 (330)
T ss_dssp TTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEE
T ss_pred CCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEE
Confidence 999999988999999999999999999999877753 7899999999999999 8898888888877653
No 322
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.62 E-value=8.6e-16 Score=170.56 Aligned_cols=150 Identities=23% Similarity=0.339 Sum_probs=122.2
Q ss_pred CCeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCC--CCCCCCCCCCcccEEeeccCccCCcCCCCcc---CCc
Q 006677 68 RTRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTG--GLPSEITSLPSLRYLYLQHNNFSGKIPSSFS---PQL 142 (635)
Q Consensus 68 ~~~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g--~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~---~~L 142 (635)
..+++.|+|++|.+++.+|. .++++++|++|+|++|++++ .+|..++++++|++|+|++|++++.+|.... ++|
T Consensus 352 l~~L~~L~l~~n~l~~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L 430 (562)
T 3a79_B 352 PSSFTFLNFTQNVFTDSVFQ-GCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESI 430 (562)
T ss_dssp CCCCCEEECCSSCCCTTTTT-TCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTC
T ss_pred CCCceEEECCCCccccchhh-hhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccC
Confidence 45788999999999987887 78999999999999999996 3456789999999999999999987776533 789
Q ss_pred ceeeccCccCcccCCchhhccccCCcEEcCCCcccccCCCC--CCCCCcEEEeecccCcCCCCcc-cCCCCCCCcc---C
Q 006677 143 VVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSS-LQKFPNSSFV---G 216 (635)
Q Consensus 143 ~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~l~l~~N~l~g~~p~~-~~~l~~l~~~---~ 216 (635)
++|+|++|+|++.+|..+. ++|+.|+|++|+|+ .+|.. .+++|+.|+|++|+|+ .+|.. +..+++|..+ +
T Consensus 431 ~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~ 506 (562)
T 3a79_B 431 LVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLK-SVPDGVFDRLTSLQYIWLHD 506 (562)
T ss_dssp CEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCC-CCCTTSTTTCTTCCCEECCS
T ss_pred CEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCC-CCCHHHHhcCCCCCEEEecC
Confidence 9999999999988877665 78999999999998 45543 7899999999999999 56665 7777766544 5
Q ss_pred CCCCCC
Q 006677 217 NSLLCG 222 (635)
Q Consensus 217 n~~l~~ 222 (635)
|+..|.
T Consensus 507 N~~~c~ 512 (562)
T 3a79_B 507 NPWDCT 512 (562)
T ss_dssp CCBCCC
T ss_pred CCcCCC
Confidence 655553
No 323
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.62 E-value=4.9e-16 Score=176.64 Aligned_cols=148 Identities=26% Similarity=0.289 Sum_probs=125.6
Q ss_pred CcceeEecCC---------CCeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCcccEEeeccC
Q 006677 58 SWVGINCTQD---------RTRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHN 128 (635)
Q Consensus 58 ~w~gv~C~~~---------~~~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~N 128 (635)
.+..|.|+.. ..+++.|+|++|++++ +++..|+++++|++|+|++|.+++..|..|++|++|++|+|++|
T Consensus 5 ~~~~~~cs~~~L~~ip~~~~~~l~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n 83 (680)
T 1ziw_A 5 SHEVADCSHLKLTQVPDDLPTNITVLNLTHNQLRR-LPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHN 83 (680)
T ss_dssp BSSEEECCSSCCSSCCSCSCTTCSEEECCSSCCCC-CCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSS
T ss_pred ECCeeECCCCCccccccccCCCCcEEECCCCCCCC-cCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCC
Confidence 4556677532 2478999999999995 55557999999999999999999888999999999999999999
Q ss_pred ccCCcCCCCcc--CCcceeeccCccCcccCCchhhccccCCcEEcCCCcccccCCCC--CCCCCcEEEeecccCcCCCCc
Q 006677 129 NFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPS 204 (635)
Q Consensus 129 ~l~g~~p~~~~--~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~l~l~~N~l~g~~p~ 204 (635)
++++..+..|. ++|++|+|++|++++..|..|+++++|++|+|++|.+++.+|.. .+++|++|+|++|.+++..|.
T Consensus 84 ~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 163 (680)
T 1ziw_A 84 ELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSE 163 (680)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHH
T ss_pred ccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHH
Confidence 99965554566 78999999999999877789999999999999999999887764 789999999999999987776
Q ss_pred cc
Q 006677 205 SL 206 (635)
Q Consensus 205 ~~ 206 (635)
.+
T Consensus 164 ~~ 165 (680)
T 1ziw_A 164 EL 165 (680)
T ss_dssp HH
T ss_pred Hh
Confidence 54
No 324
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.62 E-value=1.5e-16 Score=162.96 Aligned_cols=146 Identities=27% Similarity=0.291 Sum_probs=119.0
Q ss_pred CeEEEEEeCCCCccCcCCcccccCC-----CCCcEEEeecCCCCCCCCCCCCCCCcccEEeeccCccCCc--CCCCc--c
Q 006677 69 TRVFGLRLPGIGLVGPIPNNTLGKL-----DALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGK--IPSSF--S 139 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~l~~~~l~~l-----~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~N~l~g~--~p~~~--~ 139 (635)
.+++.|+|++|.+++. |. .++.+ ++|++|+|++|++++..|..|+++++|++|+|++|++.|. +|..+ .
T Consensus 121 ~~L~~L~Ls~N~l~~~-~~-~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~ 198 (312)
T 1wwl_A 121 PDLNILNLRNVSWATR-DA-WLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPL 198 (312)
T ss_dssp CCCSEEEEESCBCSSS-SS-HHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTT
T ss_pred CCccEEEccCCCCcch-hH-HHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhc
Confidence 5789999999999976 65 78877 9999999999999988889999999999999999999875 33333 2
Q ss_pred --CCcceeeccCccCcc--cCC-chhhccccCCcEEcCCCcccccCCCC---CCCCCcEEEeecccCcCCCCcccC-CCC
Q 006677 140 --PQLVVLDLSFNSFTG--NIP-QSIQNLTQLTGLSLQSNNLSGSIPNF---DIPKLRHLNLSYNGLKGSIPSSLQ-KFP 210 (635)
Q Consensus 140 --~~L~~L~ls~N~l~g--~~p-~~~~~l~~L~~L~l~~N~l~~~~p~~---~l~~L~~l~l~~N~l~g~~p~~~~-~l~ 210 (635)
++|++|+|++|+|++ .++ ..+.++++|+.|+|++|+|++.+|.. .+++|+.|+|++|+|+ .+|..+. ++.
T Consensus 199 ~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~~~L~ 277 (312)
T 1wwl_A 199 KFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLPAKLS 277 (312)
T ss_dssp SCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCCSEEE
T ss_pred cCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhccCCce
Confidence 799999999999993 233 34468899999999999999977532 5789999999999999 7888776 333
Q ss_pred CCCccCC
Q 006677 211 NSSFVGN 217 (635)
Q Consensus 211 ~l~~~~n 217 (635)
.|...+|
T Consensus 278 ~L~Ls~N 284 (312)
T 1wwl_A 278 VLDLSYN 284 (312)
T ss_dssp EEECCSS
T ss_pred EEECCCC
Confidence 3433344
No 325
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.62 E-value=1.2e-15 Score=164.04 Aligned_cols=156 Identities=25% Similarity=0.248 Sum_probs=103.9
Q ss_pred CcceeEecCC---------CCeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCcccEEeeccC
Q 006677 58 SWVGINCTQD---------RTRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHN 128 (635)
Q Consensus 58 ~w~gv~C~~~---------~~~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~N 128 (635)
.|..|.|.+. ...++.|+|++|++++..+ ..|.++++|++|+|++|+|++..|..|.++++|++|+|++|
T Consensus 44 ~~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~-~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n 122 (440)
T 3zyj_A 44 QFSKVICVRKNLREVPDGISTNTRLLNLHENQIQIIKV-NSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDN 122 (440)
T ss_dssp TSCEEECCSCCCSSCCSCCCTTCSEEECCSCCCCEECT-TTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSS
T ss_pred CCCEEEeCCCCcCcCCCCCCCCCcEEEccCCcCCeeCH-HHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCC
Confidence 4678888753 1357788999999885444 47888888888888888888666678888888888888888
Q ss_pred ccCCcCCCCcc--CCcceeeccCccCcccCCchhhccccCCcEEcCC-------------------------CcccccCC
Q 006677 129 NFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQS-------------------------NNLSGSIP 181 (635)
Q Consensus 129 ~l~g~~p~~~~--~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~-------------------------N~l~~~~p 181 (635)
+|++..+..|. ++|++|+|++|+|++..+..|.++++|+.|+|++ |+|+. +|
T Consensus 123 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~ 201 (440)
T 3zyj_A 123 RLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLRE-IP 201 (440)
T ss_dssp CCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSS-CC
T ss_pred cCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcc-cc
Confidence 88855555555 6788888888887755554555555555555555 44442 22
Q ss_pred CC-CCCCCcEEEeecccCcCCCCcccCCCCCCCcc
Q 006677 182 NF-DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFV 215 (635)
Q Consensus 182 ~~-~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~~ 215 (635)
.. .+++|+.|+|++|++++..|..|.++++|..+
T Consensus 202 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 236 (440)
T 3zyj_A 202 NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKL 236 (440)
T ss_dssp CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred ccCCCcccCEEECCCCccCccChhhhccCccCCEE
Confidence 22 44555555555555555555555555554433
No 326
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.62 E-value=8.6e-16 Score=171.78 Aligned_cols=109 Identities=24% Similarity=0.261 Sum_probs=89.6
Q ss_pred CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCcccEEeeccCccCCcCCCCcc--CCcceee
Q 006677 69 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLD 146 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~ 146 (635)
.++..|+|++|.+++..|. .|+++++|++|+|++|.|++..|..|+++++|++|+|++|.|++..+..|. ++|++|+
T Consensus 75 ~~L~~L~L~~n~l~~~~~~-~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~ 153 (597)
T 3oja_B 75 RQVELLNLNDLQIEEIDTY-AFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLS 153 (597)
T ss_dssp CCCSEEECTTSCCCEECTT-TTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCcEEECCCCCCCCCChH-HhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEE
Confidence 3678889999988865444 788899999999999999887777888899999999999998854444444 7889999
Q ss_pred ccCccCcccCCchhhccccCCcEEcCCCcccc
Q 006677 147 LSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSG 178 (635)
Q Consensus 147 ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~ 178 (635)
|++|+|++..|..|+++++|+.|+|++|.|++
T Consensus 154 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 185 (597)
T 3oja_B 154 MSNNNLERIEDDTFQATTSLQNLQLSSNRLTH 185 (597)
T ss_dssp CCSSCCCBCCTTTTTTCTTCCEEECTTSCCSB
T ss_pred eeCCcCCCCChhhhhcCCcCcEEECcCCCCCC
Confidence 99999988888888888888888888888875
No 327
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.62 E-value=9.4e-16 Score=158.71 Aligned_cols=133 Identities=12% Similarity=0.121 Sum_probs=96.0
Q ss_pred hccccccCceEEEEEEecCCCeEEEEEeecccCC---------------hHH--------HHHHHHHHHhhcCCCceece
Q 006677 343 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVG---------------KRD--------FEQQMEIVGRVGQHPNVVPL 399 (635)
Q Consensus 343 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~---------------~~~--------~~~e~~~l~~l~~h~niv~l 399 (635)
.+.||+|+||.||+|...+|+.||||+++..... ... ..+|...+.++ .+.++...
T Consensus 100 ~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL-~~~gv~vp 178 (397)
T 4gyi_A 100 GSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKAL-YEEGFPVP 178 (397)
T ss_dssp EEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHH-HHTTCSCC
T ss_pred cCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHH-HhcCCCCC
Confidence 5689999999999999989999999987532110 111 23455666666 33333221
Q ss_pred eEEEEeCCeeEEEEEeccCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCC
Q 006677 400 RAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDL 479 (635)
Q Consensus 400 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~ 479 (635)
.-+.. ...++||||++++.|.++... .....++.|++.+|.|||+.| ||||||||.|||+++++
T Consensus 179 ~p~~~--~~~~LVME~i~G~~L~~l~~~-----------~~~~~l~~qll~~l~~lH~~g---IVHrDLKp~NILl~~dg 242 (397)
T 4gyi_A 179 EPIAQ--SRHTIVMSLVDALPMRQVSSV-----------PDPASLYADLIALILRLAKHG---LIHGDFNEFNILIREEK 242 (397)
T ss_dssp CEEEE--ETTEEEEECCSCEEGGGCCCC-----------SCHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEEEEEE
T ss_pred eeeec--cCceEEEEecCCccHhhhccc-----------HHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHEEEeCCC
Confidence 11111 234799999999888766431 123568899999999999998 99999999999998877
Q ss_pred C----------eEEeecCCCCCC
Q 006677 480 D----------GCISDFGLTPLM 492 (635)
Q Consensus 480 ~----------~ki~DfGla~~~ 492 (635)
. +.|+||+-+...
T Consensus 243 d~~d~~~~~~~~~iID~~Q~V~~ 265 (397)
T 4gyi_A 243 DAEDPSSITLTPIIIXFPQMVSM 265 (397)
T ss_dssp CSSCTTSEEEEEEECCCTTCEET
T ss_pred CcccccccccceEEEEeCCcccC
Confidence 3 889999976543
No 328
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.62 E-value=9.1e-16 Score=158.54 Aligned_cols=143 Identities=23% Similarity=0.359 Sum_probs=107.0
Q ss_pred eEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCC--CCCCCCCCCCCcccEEeeccCccCCcCCCCccCCcceeec
Q 006677 70 RVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLT--GGLPSEITSLPSLRYLYLQHNNFSGKIPSSFSPQLVVLDL 147 (635)
Q Consensus 70 ~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~--g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~L~~L~l 147 (635)
.++.|+|++|.++ .+|+..++++++|+.|+|++|.++ +..|..+..+ +|+.|++++|++++ +|..+.++|++|+|
T Consensus 124 ~L~~L~l~~n~i~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~-l~~~~~~~L~~L~l 200 (332)
T 2ft3_A 124 SLVELRIHDNRIR-KVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG-IPKDLPETLNELHL 200 (332)
T ss_dssp TCCEEECCSSCCC-CCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-CCSSSCSSCSCCBC
T ss_pred cCCEEECCCCccC-ccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc-cCccccCCCCEEEC
Confidence 3455555555555 344435666666666666666664 3556666666 67777777777663 66666678999999
Q ss_pred cCccCcccCCchhhccccCCcEEcCCCcccccCCCC--CCCCCcEEEeecccCcCCCCcccCCCCCCCccC
Q 006677 148 SFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFVG 216 (635)
Q Consensus 148 s~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~~~ 216 (635)
++|++++..|..|.++++|+.|+|++|++++..+.. .+++|+.|+|++|+++ .+|..+.++++|..++
T Consensus 201 ~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~ 270 (332)
T 2ft3_A 201 DHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVY 270 (332)
T ss_dssp CSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEE
T ss_pred CCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEE
Confidence 999999888889999999999999999999877643 7899999999999999 7888888888877653
No 329
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.62 E-value=3.1e-16 Score=142.02 Aligned_cols=123 Identities=17% Similarity=0.258 Sum_probs=108.1
Q ss_pred CCCCCcEEEeecCCCC-CCCCCCCCCCCcccEEeeccCccCCcCCCCcc--CCcceeeccCccCcccCCchhhccccCCc
Q 006677 92 KLDALEVLSLRSNVLT-GGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTG 168 (635)
Q Consensus 92 ~l~~L~~L~L~~n~l~-g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~ls~N~l~g~~p~~~~~l~~L~~ 168 (635)
..++|+.|+|++|.++ +.+|..+..+++|++|+|++|.+++. ..+. ++|++|+|++|++++.+|..+.++++|++
T Consensus 15 ~~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~ 92 (149)
T 2je0_A 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTH 92 (149)
T ss_dssp CGGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCE
T ss_pred CCccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCE
Confidence 3478999999999998 89999999999999999999999976 5554 79999999999999889999999999999
Q ss_pred EEcCCCcccccC--CCC-CCCCCcEEEeecccCcCCCC---cccCCCCCCCccC
Q 006677 169 LSLQSNNLSGSI--PNF-DIPKLRHLNLSYNGLKGSIP---SSLQKFPNSSFVG 216 (635)
Q Consensus 169 L~l~~N~l~~~~--p~~-~l~~L~~l~l~~N~l~g~~p---~~~~~l~~l~~~~ 216 (635)
|+|++|++++.. +.. .+++|+.|++++|++++..+ ..+..+++|.+++
T Consensus 93 L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~ 146 (149)
T 2je0_A 93 LNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLD 146 (149)
T ss_dssp EECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEET
T ss_pred EECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCccccc
Confidence 999999999742 222 89999999999999997665 4788888887765
No 330
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.62 E-value=8.7e-16 Score=142.09 Aligned_cols=123 Identities=22% Similarity=0.291 Sum_probs=108.0
Q ss_pred CCCCCcEEEeecCCCC-CCCCCCCCCCCcccEEeeccCccCCcCCCCcc--CCcceeeccCccCcccCCchhhccccCCc
Q 006677 92 KLDALEVLSLRSNVLT-GGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTG 168 (635)
Q Consensus 92 ~l~~L~~L~L~~n~l~-g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~ls~N~l~g~~p~~~~~l~~L~~ 168 (635)
..++|+.|+|++|+++ +.+|..+.++++|++|+|++|.+++. ..+. ++|++|+|++|++++.+|..+.++++|++
T Consensus 22 ~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 99 (168)
T 2ell_A 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTH 99 (168)
T ss_dssp CTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCE
T ss_pred CcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCE
Confidence 4578999999999998 89999999999999999999999976 5555 79999999999999889999999999999
Q ss_pred EEcCCCcccccC--CCC-CCCCCcEEEeecccCcCCCC---cccCCCCCCCccC
Q 006677 169 LSLQSNNLSGSI--PNF-DIPKLRHLNLSYNGLKGSIP---SSLQKFPNSSFVG 216 (635)
Q Consensus 169 L~l~~N~l~~~~--p~~-~l~~L~~l~l~~N~l~g~~p---~~~~~l~~l~~~~ 216 (635)
|+|++|+|++.. +.. .+++|+.|+|++|.+++..+ ..+..+++|.+++
T Consensus 100 L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~ 153 (168)
T 2ell_A 100 LNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLD 153 (168)
T ss_dssp EECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEET
T ss_pred EeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEec
Confidence 999999999743 233 89999999999999996655 4788888888775
No 331
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.62 E-value=6.8e-16 Score=167.77 Aligned_cols=147 Identities=20% Similarity=0.155 Sum_probs=130.8
Q ss_pred CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCcccEEeeccCccCCcCCCCcc--CCcceee
Q 006677 69 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLD 146 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~ 146 (635)
.+++.|+|++|.+++..|. .|+++++|++|+|++|++++..+..|.++++|++|+|++|++++..|..|. ++|++|+
T Consensus 56 ~~L~~L~L~~n~i~~~~~~-~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 134 (477)
T 2id5_A 56 PHLEELELNENIVSAVEPG-AFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLE 134 (477)
T ss_dssp TTCCEEECTTSCCCEECTT-TTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCccCEeChh-hhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEE
Confidence 5789999999999976665 899999999999999999965556789999999999999999988888887 7999999
Q ss_pred ccCccCcccCCchhhccccCCcEEcCCCcccccCCC--CCCCCCcEEEeecccCcCCCCcccCCCCCCCccC
Q 006677 147 LSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPN--FDIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFVG 216 (635)
Q Consensus 147 ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~--~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~~~ 216 (635)
|++|++++..|..|.++++|+.|+|++|++++..+. ..+++|+.|+|++|.+++..+..|.++++|..++
T Consensus 135 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~ 206 (477)
T 2id5_A 135 VGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLE 206 (477)
T ss_dssp ECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEE
T ss_pred CCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceee
Confidence 999999999999999999999999999999975554 2889999999999999988888888888877653
No 332
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.61 E-value=1.6e-15 Score=151.28 Aligned_cols=137 Identities=20% Similarity=0.242 Sum_probs=115.0
Q ss_pred CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCcccEEeeccCccCCcCCCCccCCcceeecc
Q 006677 69 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFSPQLVVLDLS 148 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~L~~L~ls 148 (635)
.+++.|+|++|+++ .+| .++.+++|+.|+|++|+|++..| +.++++|++|+|++|++++ +|....++|++|+|+
T Consensus 41 ~~L~~L~l~~n~i~-~l~--~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~l~~-l~~~~~~~L~~L~L~ 114 (263)
T 1xeu_A 41 SGVQNFNGDNSNIQ-SLA--GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRLKN-LNGIPSACLSRLFLD 114 (263)
T ss_dssp TTCSEEECTTSCCC-CCT--TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSCCSC-CTTCCCSSCCEEECC
T ss_pred CcCcEEECcCCCcc-cch--HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECCCCccCC-cCccccCcccEEEcc
Confidence 46888999999998 677 48999999999999999996444 9999999999999999996 444333899999999
Q ss_pred CccCcccCCchhhccccCCcEEcCCCcccccCCCCCCCCCcEEEeecccCcCCCCcccCCCCCCCcc
Q 006677 149 FNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNFDIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFV 215 (635)
Q Consensus 149 ~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~~ 215 (635)
+|+|++ +| .+.++++|+.|+|++|+|++..+-..+++|+.|+|++|++++. ..+.++++|..+
T Consensus 115 ~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~~~~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L 177 (263)
T 1xeu_A 115 NNELRD-TD-SLIHLKNLEILSIRNNKLKSIVMLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWI 177 (263)
T ss_dssp SSCCSB-SG-GGTTCTTCCEEECTTSCCCBCGGGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEE
T ss_pred CCccCC-Ch-hhcCcccccEEECCCCcCCCChHHccCCCCCEEECCCCcCcch--HHhccCCCCCEE
Confidence 999996 43 6999999999999999999764333889999999999999976 667777777654
No 333
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.61 E-value=2.8e-15 Score=156.71 Aligned_cols=147 Identities=25% Similarity=0.246 Sum_probs=122.2
Q ss_pred ceeEecCCCCeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCC-CCCcccEEeeccCccCCcCCCCc
Q 006677 60 VGINCTQDRTRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEIT-SLPSLRYLYLQHNNFSGKIPSSF 138 (635)
Q Consensus 60 ~gv~C~~~~~~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~-~l~~L~~L~l~~N~l~g~~p~~~ 138 (635)
.+..|.. ..+++++++|+ .+|. .+. ..|+.|+|++|+|++..+..+. ++++|+.|+|++|+|++..|..|
T Consensus 14 ~~C~C~~-----~~l~c~~~~l~-~iP~-~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~ 84 (361)
T 2xot_A 14 ANCLCAS-----NILSCSKQQLP-NVPQ-SLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAF 84 (361)
T ss_dssp TTCEEET-----TEEECCSSCCS-SCCS-SCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTT
T ss_pred CCCEECC-----CEEEeCCCCcC-ccCc-cCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhc
Confidence 5677764 25899999998 6887 343 4689999999999977777787 99999999999999997777777
Q ss_pred c--CCcceeeccCccCcccCCchhhccccCCcEEcCCCcccccCCCC--CCCCCcEEEeecccCcCCCCccc---CCCCC
Q 006677 139 S--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSL---QKFPN 211 (635)
Q Consensus 139 ~--~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~l~l~~N~l~g~~p~~~---~~l~~ 211 (635)
. ++|++|+|++|+|++..+..|.++++|+.|+|++|+|++..|.. .+++|+.|+|++|+|++..+..| .++++
T Consensus 85 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~ 164 (361)
T 2xot_A 85 VPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPK 164 (361)
T ss_dssp TTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTT
T ss_pred cCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCc
Confidence 6 79999999999999888888999999999999999999877764 89999999999999996444444 45666
Q ss_pred CCcc
Q 006677 212 SSFV 215 (635)
Q Consensus 212 l~~~ 215 (635)
|..+
T Consensus 165 L~~L 168 (361)
T 2xot_A 165 LMLL 168 (361)
T ss_dssp CCEE
T ss_pred CCEE
Confidence 6654
No 334
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.61 E-value=9.2e-16 Score=168.64 Aligned_cols=141 Identities=27% Similarity=0.365 Sum_probs=91.0
Q ss_pred CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCC--CCCCCCCCCCcccEEeeccCccCCcCCCC-cc--CCcc
Q 006677 69 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTG--GLPSEITSLPSLRYLYLQHNNFSGKIPSS-FS--PQLV 143 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g--~~p~~~~~l~~L~~L~l~~N~l~g~~p~~-~~--~~L~ 143 (635)
..++.|+|++|.+++.+|. .++++++|++|+|++|++++ .+|..++++++|++|+|++|.+++.+|.. +. ++|+
T Consensus 324 ~~L~~L~Ls~n~l~~~~~~-~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~ 402 (520)
T 2z7x_B 324 SPFLHLDFSNNLLTDTVFE-NCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLL 402 (520)
T ss_dssp CCCCEEECCSSCCCTTTTT-TCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCC
T ss_pred CcccEEEeECCccChhhhh-hhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCC
Confidence 3566677777777766665 56777777777777777765 45556667777777777777777655554 22 5677
Q ss_pred eeeccCccCcccCCchhhccccCCcEEcCCCcccccCCCC--CCCCCcEEEeecccCcCCCCcc-cCCCCCCCc
Q 006677 144 VLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSS-LQKFPNSSF 214 (635)
Q Consensus 144 ~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~l~l~~N~l~g~~p~~-~~~l~~l~~ 214 (635)
+|+|++|++++.+|..+. ++|+.|+|++|+|+ .+|.. .+++|+.|+|++|+|+ .+|.. +.++++|..
T Consensus 403 ~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~ 472 (520)
T 2z7x_B 403 SLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLK-SVPDGIFDRLTSLQK 472 (520)
T ss_dssp EEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCCTTTTTTCTTCCE
T ss_pred EEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCC-ccCHHHhccCCcccE
Confidence 777777777666665553 56777777777776 44442 6677777777777777 45543 555555443
No 335
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.61 E-value=1e-15 Score=170.15 Aligned_cols=145 Identities=26% Similarity=0.300 Sum_probs=102.7
Q ss_pred CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCC-CCCCCCCcccEEeeccCccCCcCCCCcc--CCccee
Q 006677 69 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLP-SEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVL 145 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p-~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L 145 (635)
.++..|+|++|.+.+ +++ .++.+++|+.|+|++|.+++..| ..+.++++|++|+|++|.+++.+|..+. ++|++|
T Consensus 373 ~~L~~L~l~~n~l~~-~~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 450 (570)
T 2z63_A 373 TSLKYLDLSFNGVIT-MSS-NFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVL 450 (570)
T ss_dssp SCCCEEECCSCSEEE-EEE-EEETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEE
T ss_pred CccCEEECCCCcccc-ccc-cccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEE
Confidence 345666666666663 444 37777777777777777776555 4577777777777777777777776665 677788
Q ss_pred eccCccCc-ccCCchhhccccCCcEEcCCCcccccCCCC--CCCCCcEEEeecccCcCCCCcccCCCCCCCcc
Q 006677 146 DLSFNSFT-GNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFV 215 (635)
Q Consensus 146 ~ls~N~l~-g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~~ 215 (635)
+|++|+++ +.+|..+..+++|++|+|++|++++..|.. .+++|+.|+|++|++++..|..+.++++|..+
T Consensus 451 ~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 523 (570)
T 2z63_A 451 KMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKI 523 (570)
T ss_dssp ECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEE
T ss_pred ECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEE
Confidence 88888776 567777777778888888888777766653 67778888888888877666667666665543
No 336
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.61 E-value=1.9e-15 Score=143.24 Aligned_cols=120 Identities=21% Similarity=0.268 Sum_probs=108.0
Q ss_pred CCcceeEecCCC---------CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCcccEEeecc
Q 006677 57 QSWVGINCTQDR---------TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQH 127 (635)
Q Consensus 57 ~~w~gv~C~~~~---------~~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~ 127 (635)
|.|..|.|++.. ..++.|+|++|.++ .+|. .|.++++|+.|+|++|+|++..|..|.+|++|++|+|++
T Consensus 10 C~~~~l~~~~~~l~~ip~~~~~~l~~L~L~~n~i~-~ip~-~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~ 87 (193)
T 2wfh_A 10 CLDTVVRCSNKGLKVLPKGIPRDVTELYLDGNQFT-LVPK-ELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSY 87 (193)
T ss_dssp EETTEEECTTSCCSSCCSCCCTTCCEEECCSSCCC-SCCG-GGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred eCCCEEEcCCCCCCcCCCCCCCCCCEEECCCCcCc-hhHH-HhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCC
Confidence 478899997531 36899999999998 8986 899999999999999999988888899999999999999
Q ss_pred CccCCcCCCCcc--CCcceeeccCccCcccCCchhhccccCCcEEcCCCcccc
Q 006677 128 NNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSG 178 (635)
Q Consensus 128 N~l~g~~p~~~~--~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~ 178 (635)
|+|++..|..|. ++|++|+|++|+|++..+..|..+++|+.|+|++|.+..
T Consensus 88 N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 88 NRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp SCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 999988777777 899999999999997666789999999999999999974
No 337
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.61 E-value=7.5e-16 Score=146.56 Aligned_cols=128 Identities=23% Similarity=0.339 Sum_probs=109.3
Q ss_pred CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCcccEEeeccCccCCcCCCCcc--CCcceee
Q 006677 69 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLD 146 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~ 146 (635)
.+++.|+|++|.++ .+ + .+..+++|++|+|++|++++..|..|++|++|++|+|++|++++..|..+. ++|++|+
T Consensus 66 ~~L~~L~l~~n~~~-~~-~-~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~ 142 (197)
T 4ezg_A 66 HNIKDLTINNIHAT-NY-N-PISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSID 142 (197)
T ss_dssp TTCSEEEEESCCCS-CC-G-GGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEE
T ss_pred CCCCEEEccCCCCC-cc-h-hhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEE
Confidence 46889999999765 33 3 699999999999999999988899999999999999999999987787776 7999999
Q ss_pred ccCccCcccCCchhhccccCCcEEcCCCcccccCCCCCCCCCcEEEeecccCcC
Q 006677 147 LSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNFDIPKLRHLNLSYNGLKG 200 (635)
Q Consensus 147 ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~l~~L~~l~l~~N~l~g 200 (635)
|++|++.+.+| .+.++++|+.|+|++|++++..+-..+++|+.|++++|++.+
T Consensus 143 L~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~~~~~l~~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 143 LSYNGAITDIM-PLKTLPELKSLNIQFDGVHDYRGIEDFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp CCSCTBCCCCG-GGGGCSSCCEEECTTBCCCCCTTGGGCSSCCEEEECBC----
T ss_pred ccCCCCccccH-hhcCCCCCCEEECCCCCCcChHHhccCCCCCEEEeeCcccCC
Confidence 99999444676 799999999999999999975433489999999999999874
No 338
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.60 E-value=1.4e-15 Score=170.88 Aligned_cols=156 Identities=22% Similarity=0.235 Sum_probs=134.7
Q ss_pred CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCcccEEeeccCccC-CcCCCCcc--CCccee
Q 006677 69 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFS-GKIPSSFS--PQLVVL 145 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~N~l~-g~~p~~~~--~~L~~L 145 (635)
..+..+++.+++..+..+...+..+.+|+.++++.|.+++..|..+..+++|+.|+|++|.+. +.+|..|. ++|++|
T Consensus 420 ~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L 499 (635)
T 4g8a_A 420 EQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFL 499 (635)
T ss_dssp TTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEE
T ss_pred ccccchhhhhccccccccccccccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEE
Confidence 346677788888877777777899999999999999999999999999999999999999855 45677776 799999
Q ss_pred eccCccCcccCCchhhccccCCcEEcCCCcccccCCCC--CCCCCcEEEeecccCcCCCCcccCCC-CCCC---ccCCCC
Q 006677 146 DLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKF-PNSS---FVGNSL 219 (635)
Q Consensus 146 ~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~l~l~~N~l~g~~p~~~~~l-~~l~---~~~n~~ 219 (635)
+|++|+|++..|..|.++++|++|+|++|+|++..|.. .+++|+.|+|++|+|++..|..+.++ ++|+ ..+|+.
T Consensus 500 ~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~ 579 (635)
T 4g8a_A 500 DLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDF 579 (635)
T ss_dssp ECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCB
T ss_pred ECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCC
Confidence 99999999999999999999999999999999877764 89999999999999999999988776 3454 557888
Q ss_pred CCCCC
Q 006677 220 LCGPP 224 (635)
Q Consensus 220 l~~~~ 224 (635)
.|.+.
T Consensus 580 ~C~C~ 584 (635)
T 4g8a_A 580 ACTCE 584 (635)
T ss_dssp CCSGG
T ss_pred cccCC
Confidence 77643
No 339
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.60 E-value=1.3e-15 Score=168.46 Aligned_cols=146 Identities=22% Similarity=0.284 Sum_probs=111.3
Q ss_pred CeEEEEEeCCCCccCcCCc--ccccCCCCCcEEEeecCCCCCCCCCCCCCCCcccEEeeccCccCCcCCCCccCCcceee
Q 006677 69 TRVFGLRLPGIGLVGPIPN--NTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFSPQLVVLD 146 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~l~~--~~l~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~L~~L~ 146 (635)
.+++.|+|++|.+++ +++ ..++.+++|++|+|++|+|+ .+|..+..+++|++|+|++|+++ .+|..+.++|++|+
T Consensus 361 ~~L~~L~Ls~N~l~~-~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~-~l~~~~~~~L~~L~ 437 (549)
T 2z81_A 361 PSLQTLVLSQNHLRS-MQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIR-VVKTCIPQTLEVLD 437 (549)
T ss_dssp TTCCEEECTTSCCCC-HHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCS-CCCTTSCTTCSEEE
T ss_pred ccCcEEEccCCcccc-cccchhhhhcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCcc-cccchhcCCceEEE
Confidence 356667777776663 221 24777888888888888888 67878888888888888888887 56666667888888
Q ss_pred ccCccCcccCCchhhccccCCcEEcCCCcccccCCCC-CCCCCcEEEeecccCcCCCCcccCCCCCCCc---cCCCCCCC
Q 006677 147 LSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF-DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSF---VGNSLLCG 222 (635)
Q Consensus 147 ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~-~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~---~~n~~l~~ 222 (635)
|++|+|++.+ .++++|++|+|++|+|+ .+|.. .+++|+.|+|++|++++.+|..+.++++|.. .+|+..|.
T Consensus 438 Ls~N~l~~~~----~~l~~L~~L~Ls~N~l~-~ip~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 512 (549)
T 2z81_A 438 VSNNNLDSFS----LFLPRLQELYISRNKLK-TLPDASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 512 (549)
T ss_dssp CCSSCCSCCC----CCCTTCCEEECCSSCCS-SCCCGGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCC
T ss_pred CCCCChhhhc----ccCChhcEEECCCCccC-cCCCcccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCC
Confidence 8888888643 57889999999999998 56654 7899999999999999888887877776654 45665554
No 340
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.60 E-value=3.9e-16 Score=159.71 Aligned_cols=145 Identities=21% Similarity=0.227 Sum_probs=120.2
Q ss_pred eEEEEEeCCCCccCcCCcccc--cCCCCCcEEEeecCCCCCCCC----CCCCCCCcccEEeeccCccCCcCCCCcc--CC
Q 006677 70 RVFGLRLPGIGLVGPIPNNTL--GKLDALEVLSLRSNVLTGGLP----SEITSLPSLRYLYLQHNNFSGKIPSSFS--PQ 141 (635)
Q Consensus 70 ~v~~l~l~~~~l~g~l~~~~l--~~l~~L~~L~L~~n~l~g~~p----~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~ 141 (635)
+++.|+|++|++++.+|. .+ +.+++|++|+|++|.+++..| ..+..+++|++|+|++|++++..|..|. ++
T Consensus 92 ~L~~L~l~~n~l~~~~~~-~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~ 170 (310)
T 4glp_A 92 RLKELTLEDLKITGTMPP-LPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPA 170 (310)
T ss_dssp CCCEEEEESCCCBSCCCC-CSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTT
T ss_pred ceeEEEeeCCEeccchhh-hhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCC
Confidence 488999999999998888 56 999999999999999998766 3456899999999999999988888876 79
Q ss_pred cceeeccCccCccc--C--CchhhccccCCcEEcCCCcccccCCC-----CCCCCCcEEEeecccCcCCCCcccCCC---
Q 006677 142 LVVLDLSFNSFTGN--I--PQSIQNLTQLTGLSLQSNNLSGSIPN-----FDIPKLRHLNLSYNGLKGSIPSSLQKF--- 209 (635)
Q Consensus 142 L~~L~ls~N~l~g~--~--p~~~~~l~~L~~L~l~~N~l~~~~p~-----~~l~~L~~l~l~~N~l~g~~p~~~~~l--- 209 (635)
|++|+|++|++.+. + +..++++++|++|+|++|+|+...+. ..+++|++|+|++|++++.+|..+..+
T Consensus 171 L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~ 250 (310)
T 4glp_A 171 LTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWS 250 (310)
T ss_dssp CCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCC
T ss_pred CCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCc
Confidence 99999999998763 3 23357899999999999999743221 167999999999999999888887766
Q ss_pred CCCCcc
Q 006677 210 PNSSFV 215 (635)
Q Consensus 210 ~~l~~~ 215 (635)
++|..+
T Consensus 251 ~~L~~L 256 (310)
T 4glp_A 251 SALNSL 256 (310)
T ss_dssp TTCCCE
T ss_pred CcCCEE
Confidence 455554
No 341
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.59 E-value=1e-15 Score=150.37 Aligned_cols=144 Identities=19% Similarity=0.235 Sum_probs=122.7
Q ss_pred CeEEEEEeCCCC-ccCcCCcccccCCCCCcEEEeec-CCCCCCCCCCCCCCCcccEEeeccCccCCcCCCCcc--CCcc-
Q 006677 69 TRVFGLRLPGIG-LVGPIPNNTLGKLDALEVLSLRS-NVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLV- 143 (635)
Q Consensus 69 ~~v~~l~l~~~~-l~g~l~~~~l~~l~~L~~L~L~~-n~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~- 143 (635)
.+++.|+|++|. ++ .+++..|.++++|++|+|++ |++++..|..|.++++|++|+|++|++++ +|. +. ++|+
T Consensus 55 ~~L~~L~l~~n~~l~-~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~ 131 (239)
T 2xwt_C 55 PNISRIYVSIDVTLQ-QLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDI 131 (239)
T ss_dssp TTCCEEEEECCSSCC-EECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCS
T ss_pred CCCcEEeCCCCCCcc-eeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-ccccccccc
Confidence 578999999997 66 67766899999999999999 99996666789999999999999999996 776 54 6677
Q ss_pred --eeeccCc-cCcccCCchhhccccCC-cEEcCCCcccccCCCC--CCCCCcEEEeeccc-CcCCCCcccCCC-CCCCcc
Q 006677 144 --VLDLSFN-SFTGNIPQSIQNLTQLT-GLSLQSNNLSGSIPNF--DIPKLRHLNLSYNG-LKGSIPSSLQKF-PNSSFV 215 (635)
Q Consensus 144 --~L~ls~N-~l~g~~p~~~~~l~~L~-~L~l~~N~l~~~~p~~--~l~~L~~l~l~~N~-l~g~~p~~~~~l-~~l~~~ 215 (635)
+|+|++| ++++..+..|.++++|+ .|+|++|+++ .+|.. ..++|+.|+|++|+ +++..+..|.++ ++|..+
T Consensus 132 L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L 210 (239)
T 2xwt_C 132 FFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLL 210 (239)
T ss_dssp EEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTTCEEEEEECTTCTTCCEECTTTTTTCSBCCSEE
T ss_pred ccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCCCCCCEEEcCCCCCcccCCHHHhhccccCCcEE
Confidence 9999999 99977777899999999 9999999999 55543 44789999999995 996667778888 777765
Q ss_pred C
Q 006677 216 G 216 (635)
Q Consensus 216 ~ 216 (635)
+
T Consensus 211 ~ 211 (239)
T 2xwt_C 211 D 211 (239)
T ss_dssp E
T ss_pred E
Confidence 3
No 342
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.59 E-value=1.4e-15 Score=169.08 Aligned_cols=143 Identities=21% Similarity=0.193 Sum_probs=125.3
Q ss_pred CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCcccEEeeccCccCCcCCCCcc--CCcceee
Q 006677 69 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLD 146 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~ 146 (635)
.+++.|+|++|++++..+ ..|.++++|++|+|++|++++..|..|+++++|++|+|++|++++..|..|. ++|++|+
T Consensus 28 ~~l~~L~Ls~n~l~~~~~-~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (570)
T 2z63_A 28 FSTKNLDLSFNPLRHLGS-YSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 106 (570)
T ss_dssp SSCCEEECCSCCCCEECT-TTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEE
T ss_pred ccccEEEccCCccCccCh-hHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCcccccccc
Confidence 468899999999996444 4799999999999999999977788899999999999999999987777776 7999999
Q ss_pred ccCccCcccCCchhhccccCCcEEcCCCcccc-cCCCC--CCCCCcEEEeecccCcCCCCcccCCCCCC
Q 006677 147 LSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSG-SIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNS 212 (635)
Q Consensus 147 ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~-~~p~~--~l~~L~~l~l~~N~l~g~~p~~~~~l~~l 212 (635)
|++|++++..+..|+++++|++|+|++|.+++ .+|.. .+++|+.|++++|++++..|..+.++++|
T Consensus 107 L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 175 (570)
T 2z63_A 107 AVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQM 175 (570)
T ss_dssp CTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTC
T ss_pred ccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhcc
Confidence 99999997666679999999999999999997 45654 79999999999999998888878777666
No 343
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.58 E-value=2.5e-15 Score=166.84 Aligned_cols=125 Identities=26% Similarity=0.326 Sum_probs=103.1
Q ss_pred cCCCCCcEEEeecCCCCCCCCCCCCCCCcccEEeeccCccCC--cCCCCcc--CCcceeeccCccCcccCCc-hhhcccc
Q 006677 91 GKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSG--KIPSSFS--PQLVVLDLSFNSFTGNIPQ-SIQNLTQ 165 (635)
Q Consensus 91 ~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~N~l~g--~~p~~~~--~~L~~L~ls~N~l~g~~p~-~~~~l~~ 165 (635)
+.+++|++|+|++|++++.+|..++++++|++|+|++|++++ .+|..+. ++|++|+|++|++++.+|. .+..+++
T Consensus 350 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~ 429 (562)
T 3a79_B 350 PSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAES 429 (562)
T ss_dssp SSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTT
T ss_pred cCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCccc
Confidence 678889999999999998888899999999999999999986 3345555 7899999999999985665 4788899
Q ss_pred CCcEEcCCCcccccCCCCCCCCCcEEEeecccCcCCCCcccCCCCCCCccC
Q 006677 166 LTGLSLQSNNLSGSIPNFDIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFVG 216 (635)
Q Consensus 166 L~~L~l~~N~l~~~~p~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~~~ 216 (635)
|+.|+|++|+|++.+|..-.++|+.|+|++|+++ .+|..+.++++|..++
T Consensus 430 L~~L~l~~n~l~~~~~~~l~~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~ 479 (562)
T 3a79_B 430 ILVLNLSSNMLTGSVFRCLPPKVKVLDLHNNRIM-SIPKDVTHLQALQELN 479 (562)
T ss_dssp CCEEECCSSCCCGGGGSSCCTTCSEEECCSSCCC-CCCTTTTSSCCCSEEE
T ss_pred CCEEECCCCCCCcchhhhhcCcCCEEECCCCcCc-ccChhhcCCCCCCEEE
Confidence 9999999999988777653378999999999998 7888777888777653
No 344
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.58 E-value=4.7e-15 Score=168.51 Aligned_cols=152 Identities=23% Similarity=0.261 Sum_probs=97.5
Q ss_pred EEEEeCCCCcc--CcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCcccEEeeccCccCCcCCC--------Ccc--
Q 006677 72 FGLRLPGIGLV--GPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPS--------SFS-- 139 (635)
Q Consensus 72 ~~l~l~~~~l~--g~l~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~--------~~~-- 139 (635)
..|+|.+|.+. +.+|. .++++++|++|+|++|++++..|..|.++++|++|+|++|++++..+. .|.
T Consensus 457 ~~L~l~~n~l~~~~~~p~-~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l 535 (680)
T 1ziw_A 457 QRLMLRRVALKNVDSSPS-PFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGL 535 (680)
T ss_dssp CEEECTTSCCBCTTCSSC-TTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTC
T ss_pred ccchhccccccccccCCc-ccccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCC
Confidence 33444444333 34454 567777777777777777765556677777777777777777643211 122
Q ss_pred CCcceeeccCccCcccCCchhhccccCCcEEcCCCcccccCCCC--CCCCCcEEEeecccCcCCCCccc----CCCCCCC
Q 006677 140 PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSL----QKFPNSS 213 (635)
Q Consensus 140 ~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~l~l~~N~l~g~~p~~~----~~l~~l~ 213 (635)
++|++|+|++|+|+...+..|.++++|+.|+|++|+|++..+.. .+++|+.|+|++|++++..|..+ .++..+.
T Consensus 536 ~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~ 615 (680)
T 1ziw_A 536 SHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELD 615 (680)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEE
T ss_pred CCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEE
Confidence 56777777777777433345777788888888888887555443 67778888888888877666533 4555556
Q ss_pred ccCCCCCCCCC
Q 006677 214 FVGNSLLCGPP 224 (635)
Q Consensus 214 ~~~n~~l~~~~ 224 (635)
..+|+..|.++
T Consensus 616 l~~N~~~c~c~ 626 (680)
T 1ziw_A 616 MRFNPFDCTCE 626 (680)
T ss_dssp CTTCCCCBCCC
T ss_pred ccCCCcccCCc
Confidence 66777777643
No 345
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.58 E-value=4.6e-15 Score=156.81 Aligned_cols=108 Identities=26% Similarity=0.348 Sum_probs=78.6
Q ss_pred CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCcccEEeeccCccCCcCCCC-cc--CCccee
Q 006677 69 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSS-FS--PQLVVL 145 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~-~~--~~L~~L 145 (635)
.+++.|+|++|.+++ +++..|+++++|++|+|++|.+++..|..|+++++|++|+|++|+++ .+|.. |. ++|++|
T Consensus 69 ~~L~~L~L~~n~i~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~l~~L~~L 146 (390)
T 3o6n_A 69 RQVELLNLNDLQIEE-IDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTL 146 (390)
T ss_dssp CCCSEEECTTSCCCE-ECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEE
T ss_pred ccCcEEECCCCcccc-cChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccC-cCCHHHhcCCCCCcEE
Confidence 357777888877774 44346777888888888888887666677777888888888888777 44443 33 677888
Q ss_pred eccCccCcccCCchhhccccCCcEEcCCCcccc
Q 006677 146 DLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSG 178 (635)
Q Consensus 146 ~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~ 178 (635)
+|++|++++..|..|.++++|++|+|++|++++
T Consensus 147 ~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 179 (390)
T 3o6n_A 147 SMSNNNLERIEDDTFQATTSLQNLQLSSNRLTH 179 (390)
T ss_dssp ECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSB
T ss_pred ECCCCccCccChhhccCCCCCCEEECCCCcCCc
Confidence 888888777667777777777777777777764
No 346
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.58 E-value=3.5e-15 Score=155.34 Aligned_cols=95 Identities=21% Similarity=0.241 Sum_probs=61.5
Q ss_pred CCcceeEecCCC---------CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCC-CCCCCCcccE-Eee
Q 006677 57 QSWVGINCTQDR---------TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPS-EITSLPSLRY-LYL 125 (635)
Q Consensus 57 ~~w~gv~C~~~~---------~~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p~-~~~~l~~L~~-L~l 125 (635)
|+|..|.|++.. ..++.|+|++|+|+ .||++.|.+|++|++|+|++|++.+.+|. .|.+|++|.. +++
T Consensus 9 C~~~~v~C~~~~Lt~iP~~l~~~l~~L~Ls~N~i~-~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~ 87 (350)
T 4ay9_X 9 CSNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLR-VIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIE 87 (350)
T ss_dssp EETTEEEEESTTCCSCCTTCCTTCSEEEEESCCCS-EECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEE
T ss_pred eeCCEEEecCCCCCccCcCcCCCCCEEEccCCcCC-CcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcc
Confidence 489999997531 36889999999998 78887899999999999999998766653 3444444332 333
Q ss_pred ccCccCCcCCCCcc--CCcceeeccCccC
Q 006677 126 QHNNFSGKIPSSFS--PQLVVLDLSFNSF 152 (635)
Q Consensus 126 ~~N~l~g~~p~~~~--~~L~~L~ls~N~l 152 (635)
+.|++++..|..|. ++|++|++++|+|
T Consensus 88 ~~N~l~~l~~~~f~~l~~L~~L~l~~n~l 116 (350)
T 4ay9_X 88 KANNLLYINPEAFQNLPNLQYLLISNTGI 116 (350)
T ss_dssp EETTCCEECTTSBCCCTTCCEEEEEEECC
T ss_pred cCCcccccCchhhhhcccccccccccccc
Confidence 34444433333332 3344444433333
No 347
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.58 E-value=1.2e-15 Score=167.68 Aligned_cols=125 Identities=27% Similarity=0.314 Sum_probs=86.6
Q ss_pred cCCCCCcEEEeecCCCCCCCCCCCCCCCcccEEeeccCccCC--cCCCCcc--CCcceeeccCccCcccCCch-hhcccc
Q 006677 91 GKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSG--KIPSSFS--PQLVVLDLSFNSFTGNIPQS-IQNLTQ 165 (635)
Q Consensus 91 ~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~N~l~g--~~p~~~~--~~L~~L~ls~N~l~g~~p~~-~~~l~~ 165 (635)
..+++|++|+|++|++++.+|..++++++|++|+|++|++++ .+|..+. ++|++|+|++|++++.+|.. +..+++
T Consensus 321 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~ 400 (520)
T 2z7x_B 321 SKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKS 400 (520)
T ss_dssp SSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTT
T ss_pred hhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCcc
Confidence 566777777777777777677777777777777777777775 4444444 67777777777777655543 667777
Q ss_pred CCcEEcCCCcccccCCCCCCCCCcEEEeecccCcCCCCcccCCCCCCCccC
Q 006677 166 LTGLSLQSNNLSGSIPNFDIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFVG 216 (635)
Q Consensus 166 L~~L~l~~N~l~~~~p~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~~~ 216 (635)
|+.|+|++|++++.+|..-.++|+.|+|++|+++ .+|..+.++++|..++
T Consensus 401 L~~L~Ls~N~l~~~~~~~l~~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~ 450 (520)
T 2z7x_B 401 LLSLNMSSNILTDTIFRCLPPRIKVLDLHSNKIK-SIPKQVVKLEALQELN 450 (520)
T ss_dssp CCEEECCSSCCCGGGGGSCCTTCCEEECCSSCCC-CCCGGGGGCTTCCEEE
T ss_pred CCEEECcCCCCCcchhhhhcccCCEEECCCCccc-ccchhhhcCCCCCEEE
Confidence 7777777777776666543367777777777777 6777666666666553
No 348
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.56 E-value=1e-15 Score=157.09 Aligned_cols=143 Identities=22% Similarity=0.208 Sum_probs=93.1
Q ss_pred CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCC-C---------------CCCCCcccEEeeccCccCC
Q 006677 69 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPS-E---------------ITSLPSLRYLYLQHNNFSG 132 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p~-~---------------~~~l~~L~~L~l~~N~l~g 132 (635)
.+++.|+|++|.+++..+ ++.+++|++|+|++|++++..+. . ...+++|+.|+|++|++++
T Consensus 58 ~~L~~L~Ls~n~l~~~~~---~~~l~~L~~L~Ls~n~l~~l~~~~~L~~L~l~~n~l~~~~~~~~~~L~~L~l~~N~l~~ 134 (317)
T 3o53_A 58 TKLELLNLSSNVLYETLD---LESLSTLRTLDLNNNYVQELLVGPSIETLHAANNNISRVSCSRGQGKKNIYLANNKITM 134 (317)
T ss_dssp TTCCEEECTTSCCEEEEE---ETTCTTCCEEECCSSEEEEEEECTTCCEEECCSSCCSEEEECCCSSCEEEECCSSCCCS
T ss_pred CcCCEEECCCCcCCcchh---hhhcCCCCEEECcCCccccccCCCCcCEEECCCCccCCcCccccCCCCEEECCCCCCCC
Confidence 467788888888875432 77788888888888877632110 0 1123455666666666665
Q ss_pred cCCCCcc--CCcceeeccCccCcccCCchhh-ccccCCcEEcCCCcccccCCCCCCCCCcEEEeecccCcCCCCcccCCC
Q 006677 133 KIPSSFS--PQLVVLDLSFNSFTGNIPQSIQ-NLTQLTGLSLQSNNLSGSIPNFDIPKLRHLNLSYNGLKGSIPSSLQKF 209 (635)
Q Consensus 133 ~~p~~~~--~~L~~L~ls~N~l~g~~p~~~~-~l~~L~~L~l~~N~l~~~~p~~~l~~L~~l~l~~N~l~g~~p~~~~~l 209 (635)
..|..+. ++|++|+|++|++++..|..+. .+++|++|+|++|+|++..+...+++|+.|+|++|++++ +|..+..+
T Consensus 135 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l 213 (317)
T 3o53_A 135 LRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKGQVVFAKLKTLDLSSNKLAF-MGPEFQSA 213 (317)
T ss_dssp GGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEECCCCCTTCCEEECCSSCCCE-ECGGGGGG
T ss_pred ccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCcccccccccccCCEEECCCCcCCc-chhhhccc
Confidence 5555554 5677777777777766666653 677777777777777765444467778888888888874 44456666
Q ss_pred CCCCcc
Q 006677 210 PNSSFV 215 (635)
Q Consensus 210 ~~l~~~ 215 (635)
++|..+
T Consensus 214 ~~L~~L 219 (317)
T 3o53_A 214 AGVTWI 219 (317)
T ss_dssp TTCSEE
T ss_pred CcccEE
Confidence 666554
No 349
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.56 E-value=1.8e-17 Score=157.98 Aligned_cols=143 Identities=25% Similarity=0.331 Sum_probs=120.9
Q ss_pred eEEEEEeCCCCccCcCCc-----ccccCCCCCcEEEeecCCCCCCCCCCCCCCCcccEEeeccCccCCcCCCCcc--CCc
Q 006677 70 RVFGLRLPGIGLVGPIPN-----NTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQL 142 (635)
Q Consensus 70 ~v~~l~l~~~~l~g~l~~-----~~l~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L 142 (635)
+|+.++|+++.++|.+|. ..++.+++|++|+|++|++++ +| .+.++++|++|+|++|+++ .+|..+. ++|
T Consensus 19 ~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L 95 (198)
T 1ds9_A 19 SVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTL 95 (198)
T ss_dssp CCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHC
T ss_pred cccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcC
Confidence 456666777777777664 258999999999999999996 88 8999999999999999999 6787665 789
Q ss_pred ceeeccCccCcccCCchhhccccCCcEEcCCCcccccCC--C-CCCCCCcEEEeecccCcCCCCcc----------cCCC
Q 006677 143 VVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIP--N-FDIPKLRHLNLSYNGLKGSIPSS----------LQKF 209 (635)
Q Consensus 143 ~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p--~-~~l~~L~~l~l~~N~l~g~~p~~----------~~~l 209 (635)
++|+|++|+|++ +| .+.++++|+.|+|++|+|++..+ . ..+++|++|++++|.+++.+|.. +.++
T Consensus 96 ~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l 173 (198)
T 1ds9_A 96 EELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRL 173 (198)
T ss_dssp SEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHHC
T ss_pred CEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHhC
Confidence 999999999996 55 79999999999999999996433 2 38999999999999999877753 7888
Q ss_pred CCCCccCC
Q 006677 210 PNSSFVGN 217 (635)
Q Consensus 210 ~~l~~~~n 217 (635)
++|..++.
T Consensus 174 ~~L~~Ld~ 181 (198)
T 1ds9_A 174 PNLKKLDG 181 (198)
T ss_dssp SSCSEECC
T ss_pred CCcEEECC
Confidence 88888763
No 350
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.56 E-value=8.5e-15 Score=148.25 Aligned_cols=136 Identities=32% Similarity=0.400 Sum_probs=103.2
Q ss_pred CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCcccEEeeccCccCCcCCCCcc--CCcceee
Q 006677 69 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLD 146 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~ 146 (635)
.+++.|+|++|.+++ +++ ++++++|++|+|++|.+++ +| .+.++++|++|+|++|++++. + .+. ++|++|+
T Consensus 68 ~~L~~L~L~~n~l~~-~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~~-~-~l~~l~~L~~L~ 140 (291)
T 1h6t_A 68 PNVTKLFLNGNKLTD-IKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISDI-N-GLVHLPQLESLY 140 (291)
T ss_dssp TTCCEEECCSSCCCC-CGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCCC-G-GGGGCTTCCEEE
T ss_pred CCCCEEEccCCccCC-Ccc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECCCCcCCCC-h-hhcCCCCCCEEE
Confidence 467788888888874 443 7888888888888888884 44 488888888888888888853 3 333 7788888
Q ss_pred ccCccCcccCCchhhccccCCcEEcCCCcccccCCCCCCCCCcEEEeecccCcCCCCcccCCCCCCCcc
Q 006677 147 LSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNFDIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFV 215 (635)
Q Consensus 147 ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~~ 215 (635)
|++|++++. ..+.++++|+.|+|++|+|++..|-..+++|+.|+|++|++++ +| .+.++++|..+
T Consensus 141 l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~l~~l~~L~~L~L~~N~i~~-l~-~l~~l~~L~~L 205 (291)
T 1h6t_A 141 LGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVL 205 (291)
T ss_dssp CCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEE
T ss_pred ccCCcCCcc--hhhccCCCCCEEEccCCccccchhhcCCCccCEEECCCCcCCC-Ch-hhccCCCCCEE
Confidence 888888854 5788888888888888888876664578888888888888885 44 36666666654
No 351
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.56 E-value=3.5e-16 Score=178.15 Aligned_cols=137 Identities=27% Similarity=0.308 Sum_probs=119.3
Q ss_pred CCeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCcccEEeeccCccCCcCCCCcc--CCccee
Q 006677 68 RTRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVL 145 (635)
Q Consensus 68 ~~~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L 145 (635)
...+..|+|++|.+. .||+ .+.++++|++|+|++|.|+ .+|..|++|++|++|+|++|+|+ .+|..|+ ++|++|
T Consensus 223 l~~L~~L~Ls~n~l~-~l~~-~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L 298 (727)
T 4b8c_D 223 DQLWHALDLSNLQIF-NISA-NIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYF 298 (727)
T ss_dssp CCCCCEEECTTSCCS-CCCG-GGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEE
T ss_pred CCCCcEEECCCCCCC-CCCh-hhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEE
Confidence 357889999999998 8998 5779999999999999999 89999999999999999999999 8899987 799999
Q ss_pred eccCccCcccCCchhhccccCCcEEcCCCcccccCCCC--CC-CCCcEEEeecccCcCCCCcccCCC
Q 006677 146 DLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DI-PKLRHLNLSYNGLKGSIPSSLQKF 209 (635)
Q Consensus 146 ~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~l-~~L~~l~l~~N~l~g~~p~~~~~l 209 (635)
+|++|+|+ .+|..|++|++|+.|+|++|.|+|.+|.. .+ ..+..|+|++|.++|.+|..+..+
T Consensus 299 ~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~l~~l 364 (727)
T 4b8c_D 299 YFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHERRFI 364 (727)
T ss_dssp ECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC----
T ss_pred ECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCcccccee
Confidence 99999998 88999999999999999999999988864 11 122357899999999999876654
No 352
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.56 E-value=6.8e-16 Score=158.43 Aligned_cols=138 Identities=19% Similarity=0.142 Sum_probs=87.2
Q ss_pred eEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCcccEEeeccCccCCcCCCCcc---CCcceee
Q 006677 70 RVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS---PQLVVLD 146 (635)
Q Consensus 70 ~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~---~~L~~L~ 146 (635)
.+..|+|++|.+++..+ ..+++|+.|+|++|++++..|..++++++|++|+|++|.+++..|..+. ++|++|+
T Consensus 100 ~L~~L~l~~n~l~~~~~----~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~ 175 (317)
T 3o53_A 100 SIETLHAANNNISRVSC----SRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLN 175 (317)
T ss_dssp TCCEEECCSSCCSEEEE----CCCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEE
T ss_pred CcCEEECCCCccCCcCc----cccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEE
Confidence 34455555555553222 2356677777777777766666677777777777777777766565553 5677777
Q ss_pred ccCccCcccCCchhhccccCCcEEcCCCcccccCCCC-CCCCCcEEEeecccCcCCCCcccCCCCCCCc
Q 006677 147 LSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF-DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSF 214 (635)
Q Consensus 147 ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~-~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~ 214 (635)
|++|+|++. | ....+++|++|+|++|+|++..+.. .+++|+.|+|++|+++ .+|..+..+++|..
T Consensus 176 L~~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~ 241 (317)
T 3o53_A 176 LQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEH 241 (317)
T ss_dssp CTTSCCCEE-E-CCCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCE
T ss_pred CCCCcCccc-c-cccccccCCEEECCCCcCCcchhhhcccCcccEEECcCCccc-chhhHhhcCCCCCE
Confidence 777777644 2 2234677777777777777554443 5667777777777777 45666655555543
No 353
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.54 E-value=7.9e-15 Score=161.99 Aligned_cols=117 Identities=25% Similarity=0.263 Sum_probs=84.6
Q ss_pred EEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCcccEEeeccCccCCcCCCCcc--CCcceeecc
Q 006677 71 VFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLS 148 (635)
Q Consensus 71 v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~ls 148 (635)
+..|+|++|+|++ +|. ++++++|+.|+|++|+|+ .+|..|++|++|+.|+|++|+|++ +| .++ ++|++|+|+
T Consensus 443 L~~L~Ls~n~l~~-lp~--~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls 516 (567)
T 1dce_A 443 VRVLHLAHKDLTV-LCH--LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLC 516 (567)
T ss_dssp CSEEECTTSCCSS-CCC--GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECC
T ss_pred ceEEEecCCCCCC-CcC--ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECC
Confidence 5567777777774 663 777777777777777777 677777777777777777777775 56 454 677777777
Q ss_pred CccCcccC-CchhhccccCCcEEcCCCcccccCCCC-----CCCCCcEEEe
Q 006677 149 FNSFTGNI-PQSIQNLTQLTGLSLQSNNLSGSIPNF-----DIPKLRHLNL 193 (635)
Q Consensus 149 ~N~l~g~~-p~~~~~l~~L~~L~l~~N~l~~~~p~~-----~l~~L~~l~l 193 (635)
+|+|++.+ |..|++|++|+.|+|++|+|++.+|.. .+++|+.|+|
T Consensus 517 ~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 517 NNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp SSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEEEC
T ss_pred CCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcccCccCC
Confidence 77777665 777777777777777777777766643 3667777654
No 354
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.54 E-value=1.2e-14 Score=147.03 Aligned_cols=136 Identities=22% Similarity=0.321 Sum_probs=116.6
Q ss_pred CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCcccEEeeccCccCCcCCCCcc--CCcceee
Q 006677 69 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLD 146 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~ 146 (635)
.+++.|++++|++. .++ .++.+++|++|+|++|++++..| +.++++|++|+|++|.+++ +|. +. ++|++|+
T Consensus 46 ~~L~~L~l~~~~i~-~~~--~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~ 118 (291)
T 1h6t_A 46 NSIDQIIANNSDIK-SVQ--GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LSS-LKDLKKLKSLS 118 (291)
T ss_dssp HTCCEEECTTSCCC-CCT--TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GGG-GTTCTTCCEEE
T ss_pred CcccEEEccCCCcc-cCh--hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Chh-hccCCCCCEEE
Confidence 45889999999998 465 38999999999999999996544 9999999999999999996 443 44 8999999
Q ss_pred ccCccCcccCCchhhccccCCcEEcCCCcccccCCCC-CCCCCcEEEeecccCcCCCCcccCCCCCCCccC
Q 006677 147 LSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF-DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFVG 216 (635)
Q Consensus 147 ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~-~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~~~ 216 (635)
|++|++++. ..+.++++|+.|+|++|++++. +.. .+++|+.|+|++|++++..| +.++++|..++
T Consensus 119 L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~ 184 (291)
T 1h6t_A 119 LEHNGISDI--NGLVHLPQLESLYLGNNKITDI-TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLY 184 (291)
T ss_dssp CTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEE
T ss_pred CCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc-hhhccCCCCCEEEccCCccccchh--hcCCCccCEEE
Confidence 999999963 5799999999999999999976 443 89999999999999997655 88888877654
No 355
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.54 E-value=1.4e-14 Score=147.85 Aligned_cols=136 Identities=27% Similarity=0.380 Sum_probs=101.1
Q ss_pred CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCcccEEeeccCccCCcCCCCcc--CCcceee
Q 006677 69 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLD 146 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~ 146 (635)
.+++.|+|++|.+++ +++ +..+++|++|+|++|.+++ +| .+.++++|++|+|++|++++. |. +. ++|++|+
T Consensus 63 ~~L~~L~L~~n~i~~-~~~--~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~l~~n~l~~~-~~-l~~l~~L~~L~ 135 (308)
T 1h6u_A 63 NNLIGLELKDNQITD-LAP--LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLDLTSTQITDV-TP-LAGLSNLQVLY 135 (308)
T ss_dssp TTCCEEECCSSCCCC-CGG--GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEECTTSCCCCC-GG-GTTCTTCCEEE
T ss_pred CCCCEEEccCCcCCC-Chh--HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEECCCCCCCCc-hh-hcCCCCCCEEE
Confidence 467888888888874 554 7888888888888888884 44 688888888888888888864 32 33 7788888
Q ss_pred ccCccCcccCCchhhccccCCcEEcCCCcccccCCCCCCCCCcEEEeecccCcCCCCcccCCCCCCCcc
Q 006677 147 LSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNFDIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFV 215 (635)
Q Consensus 147 ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~~ 215 (635)
|++|++++..+ +.++++|+.|+|++|++++..+-..+++|+.|+|++|++++..+ +.++++|..+
T Consensus 136 l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L 200 (308)
T 1h6u_A 136 LDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDISP--LASLPNLIEV 200 (308)
T ss_dssp CCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEE
T ss_pred CCCCccCcCcc--ccCCCCccEEEccCCcCCCChhhcCCCCCCEEECCCCccCcChh--hcCCCCCCEE
Confidence 88888885443 77888888888888888865554477888888888888875433 5666666554
No 356
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.54 E-value=1.8e-14 Score=150.19 Aligned_cols=149 Identities=23% Similarity=0.250 Sum_probs=123.7
Q ss_pred ceeEecCCCCeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCcccEEeeccCccCCcCCCCcc
Q 006677 60 VGINCTQDRTRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS 139 (635)
Q Consensus 60 ~gv~C~~~~~~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~ 139 (635)
..+.|... .+ .++++++++ .+|. .+. ++|++|+|++|++++..+..|.++++|++|+|++|++++..|..|.
T Consensus 26 ~~~~C~~~--~~--c~~~~~~l~-~iP~-~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 97 (353)
T 2z80_A 26 ASLSCDRN--GI--CKGSSGSLN-SIPS-GLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFS 97 (353)
T ss_dssp -CCEECTT--SE--EECCSTTCS-SCCT-TCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTT
T ss_pred cCCCCCCC--eE--eeCCCCCcc-cccc-ccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcC
Confidence 46777653 23 789999999 7887 343 5899999999999966566899999999999999999988788787
Q ss_pred --CCcceeeccCccCcccCCchhhccccCCcEEcCCCcccccCC-C-C-CCCCCcEEEeeccc-CcCCCCcccCCCCCCC
Q 006677 140 --PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIP-N-F-DIPKLRHLNLSYNG-LKGSIPSSLQKFPNSS 213 (635)
Q Consensus 140 --~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p-~-~-~l~~L~~l~l~~N~-l~g~~p~~~~~l~~l~ 213 (635)
++|++|+|++|+|++..+..|+++++|++|+|++|++++..+ . . .+++|+.|++++|+ +++..|..+.++++|.
T Consensus 98 ~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~ 177 (353)
T 2z80_A 98 SLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLE 177 (353)
T ss_dssp TCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEE
T ss_pred CCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCC
Confidence 899999999999996555569999999999999999996544 1 2 79999999999995 7766677888888877
Q ss_pred ccC
Q 006677 214 FVG 216 (635)
Q Consensus 214 ~~~ 216 (635)
.++
T Consensus 178 ~L~ 180 (353)
T 2z80_A 178 ELE 180 (353)
T ss_dssp EEE
T ss_pred EEE
Confidence 653
No 357
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.53 E-value=1.3e-14 Score=148.15 Aligned_cols=137 Identities=26% Similarity=0.404 Sum_probs=117.8
Q ss_pred CCeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCcccEEeeccCccCCcCCCCcc--CCccee
Q 006677 68 RTRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVL 145 (635)
Q Consensus 68 ~~~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L 145 (635)
-.++..|+|++|.+++ ++ .++.+++|++|+|++|++++ +|. +.++++|++|+|++|++++..+ +. ++|++|
T Consensus 84 l~~L~~L~L~~n~l~~-~~--~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L 156 (308)
T 1h6u_A 84 LTKITELELSGNPLKN-VS--AIAGLQSIKTLDLTSTQITD-VTP-LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYL 156 (308)
T ss_dssp CCSCCEEECCSCCCSC-CG--GGTTCTTCCEEECTTSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEE
T ss_pred CCCCCEEEccCCcCCC-ch--hhcCCCCCCEEECCCCCCCC-chh-hcCCCCCCEEECCCCccCcCcc--ccCCCCccEE
Confidence 3579999999999985 54 59999999999999999996 553 9999999999999999997655 44 899999
Q ss_pred eccCccCcccCCchhhccccCCcEEcCCCcccccCCCCCCCCCcEEEeecccCcCCCCcccCCCCCCCcc
Q 006677 146 DLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNFDIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFV 215 (635)
Q Consensus 146 ~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~~ 215 (635)
+|++|++++. +. +.++++|+.|+|++|++++..+-..+++|+.|+|++|++++..| +.++++|..+
T Consensus 157 ~l~~n~l~~~-~~-l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L 222 (308)
T 1h6u_A 157 SIGNAQVSDL-TP-LANLSKLTTLKADDNKISDISPLASLPNLIEVHLKNNQISDVSP--LANTSNLFIV 222 (308)
T ss_dssp ECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCCCGGGGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEE
T ss_pred EccCCcCCCC-hh-hcCCCCCCEEECCCCccCcChhhcCCCCCCEEEccCCccCcccc--ccCCCCCCEE
Confidence 9999999964 44 99999999999999999976665589999999999999996553 7777777655
No 358
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.52 E-value=2.5e-14 Score=158.99 Aligned_cols=137 Identities=32% Similarity=0.382 Sum_probs=117.8
Q ss_pred CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCcccEEeeccCccCCcCCCCcc--CCcceee
Q 006677 69 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLD 146 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~ 146 (635)
.++..|+|++|.+++ +++ ++.+++|+.|+|++|.|++ +| .+.+|++|+.|+|++|+|++. | .+. ++|+.|+
T Consensus 65 ~~L~~L~Ls~N~l~~-~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~l-~-~l~~l~~L~~L~ 137 (605)
T 1m9s_A 65 PNVTKLFLNGNKLTD-IKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSLEHNGISDI-N-GLVHLPQLESLY 137 (605)
T ss_dssp TTCCEEECTTSCCCC-CGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEECTTSCCCCC-G-GGGGCTTCSEEE
T ss_pred CCCCEEEeeCCCCCC-Chh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEecCCCCCCC-c-cccCCCccCEEE
Confidence 568999999999995 554 8999999999999999995 55 799999999999999999963 3 343 8999999
Q ss_pred ccCccCcccCCchhhccccCCcEEcCCCcccccCCCCCCCCCcEEEeecccCcCCCCcccCCCCCCCccC
Q 006677 147 LSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNFDIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFVG 216 (635)
Q Consensus 147 ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~~~ 216 (635)
|++|+|++. ..|..|++|+.|+|++|+|++.+|...+++|+.|+|++|+|++. | .+.++++|..++
T Consensus 138 Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~l~~l~~L~~L~Ls~N~i~~l-~-~l~~l~~L~~L~ 203 (605)
T 1m9s_A 138 LGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLE 203 (605)
T ss_dssp CCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEE
T ss_pred CCCCccCCc--hhhcccCCCCEEECcCCcCCCchhhccCCCCCEEECcCCCCCCC-h-HHccCCCCCEEE
Confidence 999999965 68999999999999999999888856899999999999999964 4 577777776653
No 359
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.52 E-value=2.8e-14 Score=133.13 Aligned_cols=112 Identities=27% Similarity=0.313 Sum_probs=98.9
Q ss_pred CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCcccEEeeccCccCCcCCCCcc--CCcceee
Q 006677 69 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLD 146 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~ 146 (635)
..++.|+|++|++++ +|+..++.+++|++|+|++|+|++..+..|.++++|++|+|++|++++..+..+. ++|++|+
T Consensus 28 ~~l~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ 106 (177)
T 2o6r_A 28 SSATRLELESNKLQS-LPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELA 106 (177)
T ss_dssp TTCSEEECCSSCCCC-CCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCcEEEeCCCcccE-eCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEE
Confidence 468999999999994 6655789999999999999999976667789999999999999999977666665 8999999
Q ss_pred ccCccCcccCCchhhccccCCcEEcCCCcccccCC
Q 006677 147 LSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIP 181 (635)
Q Consensus 147 ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p 181 (635)
|++|+|++..+..+.++++|+.|+|++|.+++..|
T Consensus 107 l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 107 LDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 99999997666667899999999999999998665
No 360
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.52 E-value=3.1e-14 Score=156.63 Aligned_cols=118 Identities=28% Similarity=0.424 Sum_probs=80.9
Q ss_pred CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCcccEEeeccCccCCcCCCCccCCcceeecc
Q 006677 69 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFSPQLVVLDLS 148 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~L~~L~ls 148 (635)
.+++.|+|++|+|+ .|| +.+++|++|+|++|+|++ +|. +.+ +|++|+|++|+|++ +|. ..++|++|+|+
T Consensus 80 ~~L~~L~Ls~N~l~-~ip----~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~-~l~~L~~L~Ls 148 (571)
T 3cvr_A 80 PQITVLEITQNALI-SLP----ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE-LPALLEYINAD 148 (571)
T ss_dssp TTCSEEECCSSCCS-CCC----CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC-CCTTCCEEECC
T ss_pred CCCCEEECcCCCCc-ccc----cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC-cCccccEEeCC
Confidence 35777888888877 676 346777888888888875 776 655 77777777777776 565 44677777777
Q ss_pred CccCcccCCchhhccccCCcEEcCCCcccccCCCCCCCCCcEEEeecccCcCCCCc
Q 006677 149 FNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNFDIPKLRHLNLSYNGLKGSIPS 204 (635)
Q Consensus 149 ~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~l~~L~~l~l~~N~l~g~~p~ 204 (635)
+|+|++ +|. .+++|+.|+|++|+|++ +|... ++|+.|+|++|+|+ .+|.
T Consensus 149 ~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~l~-~~L~~L~Ls~N~L~-~lp~ 197 (571)
T 3cvr_A 149 NNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPELP-ESLEALDVSTNLLE-SLPA 197 (571)
T ss_dssp SSCCSC-CCC---CCTTCCEEECCSSCCSC-CCCCC-TTCCEEECCSSCCS-SCCC
T ss_pred CCccCc-CCC---cCCCcCEEECCCCCCCC-cchhh-CCCCEEECcCCCCC-chhh
Confidence 777774 554 45677777777777775 44433 66677777777666 5555
No 361
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.51 E-value=5.6e-14 Score=130.16 Aligned_cols=104 Identities=25% Similarity=0.273 Sum_probs=80.1
Q ss_pred EEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCcccEEeeccCccCCcCCCCcc--CCcceeeccCc
Q 006677 73 GLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFN 150 (635)
Q Consensus 73 ~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~ls~N 150 (635)
.|++++|+|+ .+|. .+ .++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|. ++|++|+|++|
T Consensus 13 ~l~~s~n~l~-~ip~-~~--~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 13 TVDCSGKSLA-SVPT-GI--PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp EEECTTSCCS-SCCS-CC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred EEEeCCCCcC-ccCc-cC--CCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 5677778887 5886 34 38899999999999988888899999999999999999865555553 67777777777
Q ss_pred cCcccCCchhhccccCCcEEcCCCcccccC
Q 006677 151 SFTGNIPQSIQNLTQLTGLSLQSNNLSGSI 180 (635)
Q Consensus 151 ~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~ 180 (635)
+|++..+..|.++++|+.|+|++|.++...
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c 118 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWDCAC 118 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBCTTB
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCCCCc
Confidence 777655556777777777777777776543
No 362
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.51 E-value=6.8e-14 Score=130.07 Aligned_cols=104 Identities=25% Similarity=0.284 Sum_probs=81.3
Q ss_pred EEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCcccEEeeccCccCCcCCCCcc--CCcceeeccC
Q 006677 72 FGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSF 149 (635)
Q Consensus 72 ~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~ls~ 149 (635)
+.+++++++++ .+|. .+. ++|++|+|++|+|++..|..|+++++|++|+|++|+|++..+..|. ++|++|+|++
T Consensus 15 ~~l~~~~n~l~-~iP~-~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPA-GIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SEEECCSSCCS-SCCS-CCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred cEEEeCCCCCC-ccCC-CcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 46888999986 7887 453 8999999999999988888999999999999999999965444443 6778888888
Q ss_pred ccCcccCCchhhccccCCcEEcCCCccccc
Q 006677 150 NSFTGNIPQSIQNLTQLTGLSLQSNNLSGS 179 (635)
Q Consensus 150 N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~ 179 (635)
|+|++..+..|.++++|+.|+|++|.+...
T Consensus 91 N~l~~l~~~~~~~l~~L~~L~L~~N~~~c~ 120 (174)
T 2r9u_A 91 NHLKSIPRGAFDNLKSLTHIYLYNNPWDCE 120 (174)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCBCTT
T ss_pred CccceeCHHHhccccCCCEEEeCCCCcccc
Confidence 888755555577777777777777777643
No 363
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.51 E-value=5.3e-14 Score=130.34 Aligned_cols=104 Identities=29% Similarity=0.334 Sum_probs=93.2
Q ss_pred CcEEEeecCCCCCCCCCCCCCCCcccEEeeccCccCCcCCCCcc--CCcceeeccCccCcccCCchhhccccCCcEEcCC
Q 006677 96 LEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQS 173 (635)
Q Consensus 96 L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~ 173 (635)
.+.|++++|+|+ .+|..+. ++|++|+|++|+|++..|..|. ++|++|+|++|+|++..|..|.++++|++|+|++
T Consensus 11 ~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 478999999999 6898774 8999999999999988888887 7999999999999977777889999999999999
Q ss_pred CcccccCCCC--CCCCCcEEEeecccCcCCC
Q 006677 174 NNLSGSIPNF--DIPKLRHLNLSYNGLKGSI 202 (635)
Q Consensus 174 N~l~~~~p~~--~l~~L~~l~l~~N~l~g~~ 202 (635)
|+|++..+.. .+++|+.|+|++|.++...
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c 118 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDCAC 118 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCTTB
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCCCc
Confidence 9999877753 8999999999999998653
No 364
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.51 E-value=1.4e-14 Score=135.04 Aligned_cols=123 Identities=24% Similarity=0.337 Sum_probs=90.1
Q ss_pred eEEEEEeCCCCccCcCCcccccCCC-CCcEEEeecCCCCCCCCCCCCCCCcccEEeeccCccCCcCCCCc-c--CCccee
Q 006677 70 RVFGLRLPGIGLVGPIPNNTLGKLD-ALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSF-S--PQLVVL 145 (635)
Q Consensus 70 ~v~~l~l~~~~l~g~l~~~~l~~l~-~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~-~--~~L~~L 145 (635)
.++.|+|++|+++ .+|. +..+. +|++|+|++|.|++. ..|+++++|++|+|++|++++ +|..+ . ++|++|
T Consensus 20 ~L~~L~l~~n~l~-~i~~--~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L 93 (176)
T 1a9n_A 20 RDRELDLRGYKIP-VIEN--LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICR-IGEGLDQALPDLTEL 93 (176)
T ss_dssp SCEEEECTTSCCC-SCCC--GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCE-ECSCHHHHCTTCCEE
T ss_pred CceEEEeeCCCCc-hhHH--hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccc-cCcchhhcCCCCCEE
Confidence 5778888888887 4553 44444 888888888888854 578888888888888888884 44433 3 778888
Q ss_pred eccCccCcccCCc--hhhccccCCcEEcCCCcccccCCC----C-CCCCCcEEEeecccCc
Q 006677 146 DLSFNSFTGNIPQ--SIQNLTQLTGLSLQSNNLSGSIPN----F-DIPKLRHLNLSYNGLK 199 (635)
Q Consensus 146 ~ls~N~l~g~~p~--~~~~l~~L~~L~l~~N~l~~~~p~----~-~l~~L~~l~l~~N~l~ 199 (635)
+|++|+|+ .+|. .+.++++|+.|+|++|.++...+. . .+++|+.||+++|.+.
T Consensus 94 ~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 94 ILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp ECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred ECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCCcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 88888886 5665 778888888888888888743331 2 6778888888888664
No 365
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.50 E-value=5e-15 Score=159.57 Aligned_cols=135 Identities=22% Similarity=0.251 Sum_probs=77.0
Q ss_pred CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCcc-------------cEEeeccCccCCcCC
Q 006677 69 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSL-------------RYLYLQHNNFSGKIP 135 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L-------------~~L~l~~N~l~g~~p 135 (635)
.++..|++++|++ |.+|+ .+++|++|++|+|++|.++|.+|.+++++++| ++|++++|.+++ +|
T Consensus 11 ~~L~~L~l~~n~l-~~iP~-~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~-lp 87 (454)
T 1jl5_A 11 TFLQEPLRHSSNL-TEMPV-EAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSS-LP 87 (454)
T ss_dssp -------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSC-CC
T ss_pred ccchhhhcccCch-hhCCh-hHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCcccc-CC
Confidence 5688899999999 79998 69999999999999999999999999998875 888888888885 44
Q ss_pred CCccCCcceeeccCccCcccCCchhhccccCCcEEcCCCcccccCCCCCCCCCcEEEeecccCcCCCCcccCCCCCCCcc
Q 006677 136 SSFSPQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNFDIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFV 215 (635)
Q Consensus 136 ~~~~~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~~ 215 (635)
. +.++|++|+|++|++++ +|.. +++|+.|++++|++++ +|.. .++|++|+|++|++++ +| .++++++|+++
T Consensus 88 ~-~~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~-~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L 158 (454)
T 1jl5_A 88 E-LPPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDL-PPLLEYLGVSNNQLEK-LP-ELQNSSFLKII 158 (454)
T ss_dssp S-CCTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSC-CTTCCEEECCSSCCSS-CC-CCTTCTTCCEE
T ss_pred C-CcCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccCC-CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEE
Confidence 4 34677888888888775 6643 2556666666666664 2221 1456666666666664 55 35555555443
No 366
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.48 E-value=1.1e-13 Score=128.65 Aligned_cols=101 Identities=26% Similarity=0.348 Sum_probs=89.8
Q ss_pred cEEEeecCCCCCCCCCCCCCCCcccEEeeccCccCCcCCCCcc--CCcceeeccCccCcccCCchhhccccCCcEEcCCC
Q 006677 97 EVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSN 174 (635)
Q Consensus 97 ~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N 174 (635)
+.+++++|+++ .+|..+. ++|++|+|++|+|++..|..|. ++|++|+|++|+|++..+..|.++++|+.|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 68999999997 8898775 8999999999999988888886 79999999999999766667899999999999999
Q ss_pred cccccCCC-C-CCCCCcEEEeecccCcC
Q 006677 175 NLSGSIPN-F-DIPKLRHLNLSYNGLKG 200 (635)
Q Consensus 175 ~l~~~~p~-~-~l~~L~~l~l~~N~l~g 200 (635)
+|++..+. + .+++|++|+|++|.+..
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c 119 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDC 119 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCT
T ss_pred ccceeCHHHhccccCCCEEEeCCCCccc
Confidence 99977665 3 78999999999999984
No 367
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.48 E-value=4.7e-14 Score=156.76 Aligned_cols=136 Identities=24% Similarity=0.344 Sum_probs=116.9
Q ss_pred CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCcccEEeeccCccCCcCCCCcc--CCcceee
Q 006677 69 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLD 146 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~ 146 (635)
.++..|+|+++++. .+| .++.|++|+.|+|++|+|++..| +.+|++|+.|+|++|.|++ +| .+. ++|+.|+
T Consensus 43 ~~L~~L~l~~n~i~-~l~--~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~ 115 (605)
T 1m9s_A 43 NSIDQIIANNSDIK-SVQ--GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLS 115 (605)
T ss_dssp TTCCCCBCTTCCCC-CCT--TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEE
T ss_pred CCCCEEECcCCCCC-CCh--HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEE
Confidence 45778999999998 566 49999999999999999996555 9999999999999999996 44 454 8999999
Q ss_pred ccCccCcccCCchhhccccCCcEEcCCCcccccCCCC-CCCCCcEEEeecccCcCCCCcccCCCCCCCccC
Q 006677 147 LSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF-DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFVG 216 (635)
Q Consensus 147 ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~-~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~~~ 216 (635)
|++|+|++ + +.+.+|++|+.|+|++|+|++. +.. .+++|+.|+|++|+|++..| +..+++|..++
T Consensus 116 Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l-~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~ 181 (605)
T 1m9s_A 116 LEHNGISD-I-NGLVHLPQLESLYLGNNKITDI-TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLY 181 (605)
T ss_dssp CTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC-GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEE
T ss_pred ecCCCCCC-C-ccccCCCccCEEECCCCccCCc-hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEE
Confidence 99999996 3 5699999999999999999976 433 89999999999999998766 88888777653
No 368
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.48 E-value=7.2e-14 Score=151.29 Aligned_cols=138 Identities=33% Similarity=0.356 Sum_probs=101.1
Q ss_pred CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCcccEEeeccCccCCcCCCCccCCcceeecc
Q 006677 69 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFSPQLVVLDLS 148 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~L~~L~ls 148 (635)
.++..|+|++|.+++ ++ .+..+++|+.|+|++|.+++..| +.++++|+.|+|++|.+++..|-.-.++|++|+|+
T Consensus 221 ~~L~~L~l~~n~l~~-~~--~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~L~ 295 (466)
T 1o6v_A 221 TNLDELSLNGNQLKD-IG--TLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISPLAGLTALTNLELN 295 (466)
T ss_dssp TTCCEEECCSSCCCC-CG--GGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGGGTTCTTCSEEECC
T ss_pred CCCCEEECCCCCccc-ch--hhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCccccccCCCccCeEEcC
Confidence 457788888888874 43 47788888888888888886554 78888888888888888865542222678888888
Q ss_pred CccCcccCCchhhccccCCcEEcCCCcccccCCCCCCCCCcEEEeecccCcCCCCcccCCCCCCCcc
Q 006677 149 FNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNFDIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFV 215 (635)
Q Consensus 149 ~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~~ 215 (635)
+|++++..| +..+++|+.|+|++|++++..|...+++|+.|++++|++++. ..+.++++|..+
T Consensus 296 ~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L 358 (466)
T 1o6v_A 296 ENQLEDISP--ISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDV--SSLANLTNINWL 358 (466)
T ss_dssp SSCCSCCGG--GGGCTTCSEEECCSSCCSCCGGGGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEE
T ss_pred CCcccCchh--hcCCCCCCEEECcCCcCCCchhhccCccCCEeECCCCccCCc--hhhccCCCCCEE
Confidence 888876544 777888888888888888776655777788888888877764 356666666554
No 369
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.47 E-value=4.8e-14 Score=131.38 Aligned_cols=123 Identities=17% Similarity=0.149 Sum_probs=103.4
Q ss_pred cccCCCCCcEEEeecCCCCCCCCCCCCCCC-cccEEeeccCccCCcCCCCcc--CCcceeeccCccCcccCCchhhcccc
Q 006677 89 TLGKLDALEVLSLRSNVLTGGLPSEITSLP-SLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQ 165 (635)
Q Consensus 89 ~l~~l~~L~~L~L~~n~l~g~~p~~~~~l~-~L~~L~l~~N~l~g~~p~~~~--~~L~~L~ls~N~l~g~~p~~~~~l~~ 165 (635)
.+.++.+|+.|+|++|+++ .+|. +..+. +|++|+|++|.+++. ..+. ++|++|+|++|+|++..|..+..+++
T Consensus 14 ~~~~~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 89 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPD 89 (176)
T ss_dssp EEECTTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTT
T ss_pred hcCCcCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCC
Confidence 4778999999999999999 5664 66666 999999999999965 4555 79999999999999665566699999
Q ss_pred CCcEEcCCCcccccCCC---C-CCCCCcEEEeecccCcCCCCcc----cCCCCCCCccCC
Q 006677 166 LTGLSLQSNNLSGSIPN---F-DIPKLRHLNLSYNGLKGSIPSS----LQKFPNSSFVGN 217 (635)
Q Consensus 166 L~~L~l~~N~l~~~~p~---~-~l~~L~~l~l~~N~l~g~~p~~----~~~l~~l~~~~n 217 (635)
|++|+|++|+|+. +|. . .+++|+.|+|++|.++ .+|.. +..+++|.+++-
T Consensus 90 L~~L~L~~N~i~~-~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~ 147 (176)
T 1a9n_A 90 LTELILTNNSLVE-LGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDF 147 (176)
T ss_dssp CCEEECCSCCCCC-GGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETT
T ss_pred CCEEECCCCcCCc-chhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCC
Confidence 9999999999974 443 2 7899999999999998 56764 888888887763
No 370
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.46 E-value=2.4e-13 Score=146.33 Aligned_cols=132 Identities=25% Similarity=0.381 Sum_probs=100.9
Q ss_pred eEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCcccEEeeccCccCCcCCCCccCCcceeeccC
Q 006677 70 RVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFSPQLVVLDLSF 149 (635)
Q Consensus 70 ~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~L~~L~ls~ 149 (635)
.++.|+|++|.+++ +|. + .++|++|+|++|++++ +| +|+++++|++|++++|++++ +|..+ .+|++|+|++
T Consensus 112 ~L~~L~l~~n~l~~-l~~--~--~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~-~~L~~L~L~~ 182 (454)
T 1jl5_A 112 SLKSLLVDNNNLKA-LSD--L--PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP-PSLEFIAAGN 182 (454)
T ss_dssp TCCEEECCSSCCSC-CCS--C--CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC-TTCCEEECCS
T ss_pred CCcEEECCCCccCc-ccC--C--CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc-ccccEEECcC
Confidence 45555555555552 332 1 1688899999999985 88 69999999999999999986 66554 5899999999
Q ss_pred ccCcccCCchhhccccCCcEEcCCCcccccCCCCCCCCCcEEEeecccCcCCCCcccCCCCCCCccC
Q 006677 150 NSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNFDIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFVG 216 (635)
Q Consensus 150 N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~~~ 216 (635)
|++++ +| .++++++|+.|++++|++++ +|.. .++|+.|++++|+++ .+|. +.++++|..++
T Consensus 183 n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~-~~~L~~L~l~~n~l~-~lp~-~~~l~~L~~L~ 243 (454)
T 1jl5_A 183 NQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDL-PLSLESIVAGNNILE-ELPE-LQNLPFLTTIY 243 (454)
T ss_dssp SCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCC-CTTCCEEECCSSCCS-SCCC-CTTCTTCCEEE
T ss_pred CcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCC-cCcccEEECcCCcCC-cccc-cCCCCCCCEEE
Confidence 99996 66 68999999999999999986 4432 368999999999998 6774 77777776653
No 371
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.46 E-value=5.3e-14 Score=155.36 Aligned_cols=116 Identities=29% Similarity=0.323 Sum_probs=90.2
Q ss_pred CCcEEEeecCCCCCCCCCCCCCCCcccEEeeccCccCCcCCCCcc--CCcceeeccCccCcccCCchhhccccCCcEEcC
Q 006677 95 ALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQ 172 (635)
Q Consensus 95 ~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~ 172 (635)
.|+.|+|++|+|++ +|. |++|++|+.|+|++|+|+ .+|..++ ++|+.|+|++|+|++ +| .|++|++|+.|+|+
T Consensus 442 ~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls 516 (567)
T 1dce_A 442 DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLC 516 (567)
T ss_dssp TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECC
T ss_pred CceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECC
Confidence 46778888888885 776 888888888888888888 7788777 788888888888885 66 78888888888888
Q ss_pred CCcccccC-CCC--CCCCCcEEEeecccCcCCCCcc---cCCCCCCCcc
Q 006677 173 SNNLSGSI-PNF--DIPKLRHLNLSYNGLKGSIPSS---LQKFPNSSFV 215 (635)
Q Consensus 173 ~N~l~~~~-p~~--~l~~L~~l~l~~N~l~g~~p~~---~~~l~~l~~~ 215 (635)
+|+|++.+ |.. .+++|+.|+|++|+|++.+|.. +..+++|.++
T Consensus 517 ~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~~L 565 (567)
T 1dce_A 517 NNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSI 565 (567)
T ss_dssp SSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEE
T ss_pred CCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcccCcc
Confidence 88888775 553 7888888888888888665522 2235565544
No 372
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.45 E-value=1.3e-13 Score=148.62 Aligned_cols=124 Identities=23% Similarity=0.153 Sum_probs=81.4
Q ss_pred CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCcccEEeeccCccCCcCCCCccCCcceeecc
Q 006677 69 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFSPQLVVLDLS 148 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~L~~L~ls 148 (635)
.++..|+|++|...|.++ ++.+++|+.|+|++|++++ +| ++++++|+.|++++|++++. +-.-.++|++|+|+
T Consensus 148 ~~L~~L~l~~n~~~~~~~---~~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~-~l~~l~~L~~L~Ls 220 (457)
T 3bz5_A 148 TQLTELDCHLNKKITKLD---VTPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL-DLNQNIQLTFLDCS 220 (457)
T ss_dssp TTCCEEECTTCSCCCCCC---CTTCTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC-CCTTCTTCSEEECC
T ss_pred CcCCEEECCCCCcccccc---cccCCcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee-ccccCCCCCEEECc
Confidence 356777787776666662 6677788888888888775 55 77777777777777777754 31112677777777
Q ss_pred CccCcccCCchhhccccCCcEEcCCCcccccCCCCCCC----------CCcEEEeecccCcCCCC
Q 006677 149 FNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNFDIP----------KLRHLNLSYNGLKGSIP 203 (635)
Q Consensus 149 ~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~l~----------~L~~l~l~~N~l~g~~p 203 (635)
+|+|++ +| ++.+++|+.|++++|+|++..+ ..++ +|+.|++++|.+.|.+|
T Consensus 221 ~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~-~~l~~L~~L~l~~n~L~~L~l~~n~~~~~~~ 281 (457)
T 3bz5_A 221 SNKLTE-ID--VTPLTQLTYFDCSVNPLTELDV-STLSKLTTLHCIQTDLLEIDLTHNTQLIYFQ 281 (457)
T ss_dssp SSCCSC-CC--CTTCTTCSEEECCSSCCSCCCC-TTCTTCCEEECTTCCCSCCCCTTCTTCCEEE
T ss_pred CCcccc-cC--ccccCCCCEEEeeCCcCCCcCH-HHCCCCCEEeccCCCCCEEECCCCccCCccc
Confidence 777775 55 6777777777777777776433 2233 33444455555555554
No 373
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.45 E-value=6.1e-14 Score=156.11 Aligned_cols=151 Identities=25% Similarity=0.345 Sum_probs=106.4
Q ss_pred CCCCCCCCCCCcceeEec------CCCCeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCccc
Q 006677 48 NWSSTNPICQSWVGINCT------QDRTRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLR 121 (635)
Q Consensus 48 ~w~~~~~~c~~w~gv~C~------~~~~~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~ 121 (635)
.|....++| .|.|..|. .....++.|++++++|+ .+|. .+. ++|++|+|++|+|+ .+|. .+++|+
T Consensus 14 ~W~~~~~~~-~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~-~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~ 84 (622)
T 3g06_A 14 AWRRAAPAE-ESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPD-CLP--AHITTLVIPDNNLT-SLPA---LPPELR 84 (622)
T ss_dssp HHHHTCCGG-GHHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCS-CCC--TTCSEEEECSCCCS-CCCC---CCTTCC
T ss_pred HHHhcCCcc-hhccccccCcccccccCCCCcEEEecCCCcC-ccCh-hhC--CCCcEEEecCCCCC-CCCC---cCCCCC
Confidence 577665555 78664221 11134788999999998 8887 454 78999999999998 6776 578899
Q ss_pred EEeeccCccCCcCCCCccCCcceeeccCccCcccCCchhhccccCCcEEcCCCcccccCCCCCCCCCcEEEeecccCcCC
Q 006677 122 YLYLQHNNFSGKIPSSFSPQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNFDIPKLRHLNLSYNGLKGS 201 (635)
Q Consensus 122 ~L~l~~N~l~g~~p~~~~~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~l~~L~~l~l~~N~l~g~ 201 (635)
+|+|++|+|+ .+|. ..++|++|+|++|+|++ +|. .+++|+.|+|++|+|++ +|. .+++|++|+|++|++++
T Consensus 85 ~L~Ls~N~l~-~lp~-~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~~-lp~-~l~~L~~L~Ls~N~l~~- 155 (622)
T 3g06_A 85 TLEVSGNQLT-SLPV-LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQLTS-LPV-LPPGLQELSVSDNQLAS- 155 (622)
T ss_dssp EEEECSCCCS-CCCC-CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSCCSC-CCC-CCTTCCEEECCSSCCSC-
T ss_pred EEEcCCCcCC-cCCC-CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCCCCc-CCC-CCCCCCEEECcCCcCCC-
Confidence 9999999988 4666 34788888888888884 554 56778888888888775 443 35777777777777774
Q ss_pred CCcccCCCCCCCccC
Q 006677 202 IPSSLQKFPNSSFVG 216 (635)
Q Consensus 202 ~p~~~~~l~~l~~~~ 216 (635)
+|..+.++..|...+
T Consensus 156 l~~~~~~L~~L~L~~ 170 (622)
T 3g06_A 156 LPALPSELCKLWAYN 170 (622)
T ss_dssp CCCCCTTCCEEECCS
T ss_pred cCCccCCCCEEECCC
Confidence 455555554443333
No 374
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.45 E-value=2.4e-13 Score=135.36 Aligned_cols=123 Identities=24% Similarity=0.292 Sum_probs=105.9
Q ss_pred CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCcccEEeeccCccCCcCCCCcc--CCcceee
Q 006677 69 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLD 146 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~ 146 (635)
.+++.|+|++|.+++ +++ ++++++|+.|+|++|++++ +|. +.. ++|+.|+|++|++++. | .+. ++|++|+
T Consensus 63 ~~L~~L~L~~N~i~~-~~~--l~~l~~L~~L~L~~N~l~~-l~~-~~~-~~L~~L~L~~N~l~~~-~-~l~~l~~L~~L~ 134 (263)
T 1xeu_A 63 TNLKELHLSHNQISD-LSP--LKDLTKLEELSVNRNRLKN-LNG-IPS-ACLSRLFLDNNELRDT-D-SLIHLKNLEILS 134 (263)
T ss_dssp TTCCEEECCSSCCCC-CGG--GTTCSSCCEEECCSSCCSC-CTT-CCC-SSCCEEECCSSCCSBS-G-GGTTCTTCCEEE
T ss_pred CCCCEEECCCCccCC-Chh--hccCCCCCEEECCCCccCC-cCc-ccc-CcccEEEccCCccCCC-h-hhcCcccccEEE
Confidence 579999999999995 665 9999999999999999995 664 334 9999999999999963 4 344 8999999
Q ss_pred ccCccCcccCCchhhccccCCcEEcCCCcccccCCCCCCCCCcEEEeecccCcCC
Q 006677 147 LSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNFDIPKLRHLNLSYNGLKGS 201 (635)
Q Consensus 147 ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~l~~L~~l~l~~N~l~g~ 201 (635)
|++|+|++. | .+..+++|+.|+|++|+|++...-..+++|+.|+|++|.+++.
T Consensus 135 Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 135 IRNNKLKSI-V-MLGFLSKLEVLDLHGNEITNTGGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp CTTSCCCBC-G-GGGGCTTCCEEECTTSCCCBCTTSTTCCCCCEEEEEEEEEECC
T ss_pred CCCCcCCCC-h-HHccCCCCCEEECCCCcCcchHHhccCCCCCEEeCCCCcccCC
Confidence 999999964 4 7999999999999999999873333899999999999999965
No 375
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.43 E-value=2.4e-13 Score=147.22 Aligned_cols=138 Identities=29% Similarity=0.358 Sum_probs=108.3
Q ss_pred CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCcccEEeeccCccCCcCCCCccCCcceeecc
Q 006677 69 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFSPQLVVLDLS 148 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~L~~L~ls 148 (635)
.++..|+|++|.+.+..| ++.+++|+.|+|++|++++ ++ .+..+++|+.|+|++|.+++..|-.-.++|++|+|+
T Consensus 199 ~~L~~L~l~~n~l~~~~~---~~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~ 273 (466)
T 1o6v_A 199 TNLESLIATNNQISDITP---LGILTNLDELSLNGNQLKD-IG-TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 273 (466)
T ss_dssp TTCSEEECCSSCCCCCGG---GGGCTTCCEEECCSSCCCC-CG-GGGGCTTCSEEECCSSCCCCCGGGTTCTTCSEEECC
T ss_pred CCCCEEEecCCccccccc---ccccCCCCEEECCCCCccc-ch-hhhcCCCCCEEECCCCccccchhhhcCCCCCEEECC
Confidence 468888999998886433 7778899999999999885 43 688889999999999999876662223789999999
Q ss_pred CccCcccCCchhhccccCCcEEcCCCcccccCCCCCCCCCcEEEeecccCcCCCCcccCCCCCCCcc
Q 006677 149 FNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNFDIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFV 215 (635)
Q Consensus 149 ~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~~ 215 (635)
+|++++..| +..+++|+.|+|++|++++..+...+++|+.|+|++|++++..| +..+++|..+
T Consensus 274 ~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L 336 (466)
T 1o6v_A 274 ANQISNISP--LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISP--VSSLTKLQRL 336 (466)
T ss_dssp SSCCCCCGG--GTTCTTCSEEECCSSCCSCCGGGGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEE
T ss_pred CCccCcccc--ccCCCccCeEEcCCCcccCchhhcCCCCCCEEECcCCcCCCchh--hccCccCCEe
Confidence 999986544 88889999999999999876665588889999999999987665 5556655543
No 376
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.42 E-value=7.4e-13 Score=142.69 Aligned_cols=133 Identities=23% Similarity=0.221 Sum_probs=103.2
Q ss_pred CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCcccEEeeccCccCCcCCCCccCCcceeecc
Q 006677 69 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFSPQLVVLDLS 148 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~L~~L~ls 148 (635)
.++..|+|++|.+++ +| ++++++|++|+|++|++++ +| ++++++|++|++++|++.+.++-.-.++|++|+|+
T Consensus 106 ~~L~~L~L~~N~l~~-l~---~~~l~~L~~L~l~~N~l~~-l~--l~~l~~L~~L~l~~n~~~~~~~~~~l~~L~~L~ls 178 (457)
T 3bz5_A 106 TKLTYLNCDTNKLTK-LD---VSQNPLLTYLNCARNTLTE-ID--VSHNTQLTELDCHLNKKITKLDVTPQTQLTTLDCS 178 (457)
T ss_dssp TTCCEEECCSSCCSC-CC---CTTCTTCCEEECTTSCCSC-CC--CTTCTTCCEEECTTCSCCCCCCCTTCTTCCEEECC
T ss_pred CcCCEEECCCCcCCe-ec---CCCCCcCCEEECCCCccce-ec--cccCCcCCEEECCCCCcccccccccCCcCCEEECC
Confidence 468899999999986 54 8899999999999999996 44 88888888888888877767653333788888888
Q ss_pred CccCcccCCchhhccccCCcEEcCCCcccccCCCCCCCCCcEEEeecccCcCCCCcccCCCCCCCcc
Q 006677 149 FNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNFDIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFV 215 (635)
Q Consensus 149 ~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~~ 215 (635)
+|+|++ +| ++.+++|+.|++++|+|++. +-..+++|+.|+|++|++++ +| +..+++|..+
T Consensus 179 ~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~-~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L 238 (457)
T 3bz5_A 179 FNKITE-LD--VSQNKLLNRLNCDTNNITKL-DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYF 238 (457)
T ss_dssp SSCCCC-CC--CTTCTTCCEEECCSSCCSCC-CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEE
T ss_pred CCccce-ec--cccCCCCCEEECcCCcCCee-ccccCCCCCEEECcCCcccc-cC--ccccCCCCEE
Confidence 888886 55 77888888888888888864 44477888888888888886 55 6666666544
No 377
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.42 E-value=2.7e-13 Score=140.66 Aligned_cols=139 Identities=23% Similarity=0.315 Sum_probs=94.3
Q ss_pred CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCcccEEeeccCccCCcCCCCccCCcceeecc
Q 006677 69 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFSPQLVVLDLS 148 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~L~~L~ls 148 (635)
.++..|++++|.+.+ +++ +..+++|+.|++++|.+++..+ +..+++|+.|+|++|++++..+-.-.++|++|+|+
T Consensus 177 ~~L~~L~l~~n~l~~-~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~ 251 (347)
T 4fmz_A 177 TDLYSLSLNYNQIED-ISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSPLANLSQLTWLEIG 251 (347)
T ss_dssp TTCSEEECTTSCCCC-CGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECC
T ss_pred CCCCEEEccCCcccc-ccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcchhcCCCCCEEECC
Confidence 457788888888773 443 6777777777777777775433 77777777777777777754441112677777777
Q ss_pred CccCcccCCchhhccccCCcEEcCCCcccccCCCC-CCCCCcEEEeecccCcCCCCcccCCCCCCCcc
Q 006677 149 FNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF-DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFV 215 (635)
Q Consensus 149 ~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~-~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~~ 215 (635)
+|++++ + ..+..+++|+.|++++|++++. +.. .+++|+.|+|++|++++..|..+.++++|..+
T Consensus 252 ~n~l~~-~-~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L 316 (347)
T 4fmz_A 252 TNQISD-I-NAVKDLTKLKMLNVGSNQISDI-SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTL 316 (347)
T ss_dssp SSCCCC-C-GGGTTCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEE
T ss_pred CCccCC-C-hhHhcCCCcCEEEccCCccCCC-hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEE
Confidence 777774 3 4567777777777777777754 332 66777777777777776666666666665544
No 378
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.41 E-value=2.6e-13 Score=140.91 Aligned_cols=106 Identities=26% Similarity=0.360 Sum_probs=81.3
Q ss_pred CCcceeEecCCCCeEEEEEeCCC-CccCcCCcccccCCCCCcEEEeec-CCCCCCCCCCCCCCCcccEEeeccCccCCcC
Q 006677 57 QSWVGINCTQDRTRVFGLRLPGI-GLVGPIPNNTLGKLDALEVLSLRS-NVLTGGLPSEITSLPSLRYLYLQHNNFSGKI 134 (635)
Q Consensus 57 ~~w~gv~C~~~~~~v~~l~l~~~-~l~g~l~~~~l~~l~~L~~L~L~~-n~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~ 134 (635)
|.|.+|.|++ + +|+ .||. |..+++|+.|+|++ |+|++..|..|++|++|+.|+|++|+|++..
T Consensus 8 C~~~~v~~~~------------~n~l~-~ip~--l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 72 (347)
T 2ifg_A 8 HGSSGLRCTR------------DGALD-SLHH--LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVA 72 (347)
T ss_dssp SSSSCEECCS------------SCCCT-TTTT--SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEEC
T ss_pred ccCCEEEcCC------------CCCCC-ccCC--CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeC
Confidence 3787777754 3 676 5886 89999999999996 9999777788999999999999999998877
Q ss_pred CCCcc--CCcceeeccCccCcccCCchhhccccCCcEEcCCCcccc
Q 006677 135 PSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSG 178 (635)
Q Consensus 135 p~~~~--~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~ 178 (635)
|..|. ++|++|+|++|+|++..+..|..++ |+.|+|++|.|..
T Consensus 73 ~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 73 PDAFHFTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp TTGGGSCSCCCEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCCC
T ss_pred HHHhcCCcCCCEEeCCCCccceeCHHHcccCC-ceEEEeeCCCccC
Confidence 76665 6778888888888755444555554 7777777777763
No 379
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.40 E-value=5e-15 Score=153.07 Aligned_cols=126 Identities=20% Similarity=0.244 Sum_probs=74.2
Q ss_pred CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCC-CCCCCCCCCcccEEeeccCccCCcCCCCcc--CCccee
Q 006677 69 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGG-LPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVL 145 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~-~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L 145 (635)
.+++.|++++|.+.+..+. +..+++|++|+|++|.+++. +|..+.++++|++|+|++|.+++.+|..+. ++|++|
T Consensus 70 ~~l~~L~l~~n~l~~~~~~--~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L 147 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAE--HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRL 147 (336)
T ss_dssp TTCSEEECTTCEECSCCCS--CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEE
T ss_pred ccceEEEcCCccccccchh--hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEE
Confidence 3466666777766655443 45566666666666666644 555666666666666666666655554444 566666
Q ss_pred eccCc-cCccc-CCchhhccccCCcEEcCCC-ccccc-CCCC--CCC-CCcEEEeecc
Q 006677 146 DLSFN-SFTGN-IPQSIQNLTQLTGLSLQSN-NLSGS-IPNF--DIP-KLRHLNLSYN 196 (635)
Q Consensus 146 ~ls~N-~l~g~-~p~~~~~l~~L~~L~l~~N-~l~~~-~p~~--~l~-~L~~l~l~~N 196 (635)
+|++| .+++. +|..+.++++|++|+|++| .+++. ++.. .++ +|++|+|++|
T Consensus 148 ~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~ 205 (336)
T 2ast_B 148 NLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGY 205 (336)
T ss_dssp ECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSC
T ss_pred ECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCC
Confidence 66666 45542 5555566666666666666 55542 2221 444 5555555555
No 380
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.38 E-value=4e-13 Score=139.42 Aligned_cols=138 Identities=26% Similarity=0.317 Sum_probs=107.3
Q ss_pred CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCcccEEeeccCccCCcCCCCccCCcceeecc
Q 006677 69 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFSPQLVVLDLS 148 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~L~~L~ls 148 (635)
..+..|+++++.+.+ +++ ++.+++|+.|+|++|.+++ ++. +..+++|+.|++++|.+++..+-.-.++|++|+|+
T Consensus 155 ~~L~~L~l~~~~~~~-~~~--~~~l~~L~~L~l~~n~l~~-~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~L~~L~l~ 229 (347)
T 4fmz_A 155 TGLNYLTVTESKVKD-VTP--IANLTDLYSLSLNYNQIED-ISP-LASLTSLHYFTAYVNQITDITPVANMTRLNSLKIG 229 (347)
T ss_dssp TTCCEEECCSSCCCC-CGG--GGGCTTCSEEECTTSCCCC-CGG-GGGCTTCCEEECCSSCCCCCGGGGGCTTCCEEECC
T ss_pred CCCcEEEecCCCcCC-chh--hccCCCCCEEEccCCcccc-ccc-ccCCCccceeecccCCCCCCchhhcCCcCCEEEcc
Confidence 468889999998874 443 8889999999999999984 443 88899999999999999866552223789999999
Q ss_pred CccCcccCCchhhccccCCcEEcCCCcccccCCCCCCCCCcEEEeecccCcCCCCcccCCCCCCCcc
Q 006677 149 FNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNFDIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFV 215 (635)
Q Consensus 149 ~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~~ 215 (635)
+|++++..+ +..+++|+.|++++|.+++......+++|+.|++++|++++. ..+..+++|..+
T Consensus 230 ~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L 292 (347)
T 4fmz_A 230 NNKITDLSP--LANLSQLTWLEIGTNQISDINAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSL 292 (347)
T ss_dssp SSCCCCCGG--GTTCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEE
T ss_pred CCccCCCcc--hhcCCCCCEEECCCCccCCChhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEE
Confidence 999985443 888999999999999988642223788999999999998864 346666666554
No 381
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.37 E-value=9.3e-15 Score=151.02 Aligned_cols=147 Identities=23% Similarity=0.295 Sum_probs=99.7
Q ss_pred CeEEEEEeCCCCccCc-CCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCcccEEeeccC-ccCCc-CCCCcc--CCcc
Q 006677 69 TRVFGLRLPGIGLVGP-IPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHN-NFSGK-IPSSFS--PQLV 143 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~-l~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~N-~l~g~-~p~~~~--~~L~ 143 (635)
.+++.|+|++|.+++. ++. .+..+++|++|+|++|.+++.+|..++++++|++|+|++| .+++. +|..+. ++|+
T Consensus 93 ~~L~~L~L~~~~l~~~~~~~-~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~ 171 (336)
T 2ast_B 93 FRVQHMDLSNSVIEVSTLHG-ILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLD 171 (336)
T ss_dssp BCCCEEECTTCEECHHHHHH-HHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCC
T ss_pred CCCCEEEccCCCcCHHHHHH-HHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCC
Confidence 4577777777777655 555 5777777777777777777667777777777777777777 56642 443333 6777
Q ss_pred eeeccCc-cCccc-CCchhhccc-cCCcEEcCCC--ccc-ccCCCC--CCCCCcEEEeeccc-CcCCCCcccCCCCCCCc
Q 006677 144 VLDLSFN-SFTGN-IPQSIQNLT-QLTGLSLQSN--NLS-GSIPNF--DIPKLRHLNLSYNG-LKGSIPSSLQKFPNSSF 214 (635)
Q Consensus 144 ~L~ls~N-~l~g~-~p~~~~~l~-~L~~L~l~~N--~l~-~~~p~~--~l~~L~~l~l~~N~-l~g~~p~~~~~l~~l~~ 214 (635)
+|+|++| ++++. ++..+.+++ +|++|+|++| .++ +.+|.. .+++|+.|+|++|. +++..+..+.++++|..
T Consensus 172 ~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~ 251 (336)
T 2ast_B 172 ELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQH 251 (336)
T ss_dssp EEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCE
T ss_pred EEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCE
Confidence 7777777 77754 566677777 7777777777 344 333332 56777777777777 66666666666666665
Q ss_pred cC
Q 006677 215 VG 216 (635)
Q Consensus 215 ~~ 216 (635)
++
T Consensus 252 L~ 253 (336)
T 2ast_B 252 LS 253 (336)
T ss_dssp EE
T ss_pred ee
Confidence 53
No 382
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.35 E-value=2.1e-14 Score=151.52 Aligned_cols=148 Identities=20% Similarity=0.300 Sum_probs=105.4
Q ss_pred CeEEEEEeCCC---CccCcCCccc------ccCCCCCcEEEeecCCCCC----CCCCCCCCCCcccEEeeccCccCCcCC
Q 006677 69 TRVFGLRLPGI---GLVGPIPNNT------LGKLDALEVLSLRSNVLTG----GLPSEITSLPSLRYLYLQHNNFSGKIP 135 (635)
Q Consensus 69 ~~v~~l~l~~~---~l~g~l~~~~------l~~l~~L~~L~L~~n~l~g----~~p~~~~~l~~L~~L~l~~N~l~g~~p 135 (635)
.+++.|+|++| .++|.+|.+. +..+++|++|+|++|.+++ .+|..+.++++|++|+|++|.+++..+
T Consensus 60 ~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~ 139 (386)
T 2ca6_A 60 KDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAG 139 (386)
T ss_dssp TTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHH
T ss_pred CCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHH
Confidence 45777888874 5556666521 3678888888888888886 467777888888888888888864433
Q ss_pred CCcc---------------CCcceeeccCccCc-ccCC---chhhccccCCcEEcCCCccc--c---cCC-CC-CCCCCc
Q 006677 136 SSFS---------------PQLVVLDLSFNSFT-GNIP---QSIQNLTQLTGLSLQSNNLS--G---SIP-NF-DIPKLR 189 (635)
Q Consensus 136 ~~~~---------------~~L~~L~ls~N~l~-g~~p---~~~~~l~~L~~L~l~~N~l~--~---~~p-~~-~l~~L~ 189 (635)
..+. ++|++|+|++|+|+ +.+| ..+.++++|+.|+|++|+|+ | .+| .. .+++|+
T Consensus 140 ~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~ 219 (386)
T 2ca6_A 140 AKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELK 219 (386)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCC
T ss_pred HHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCcc
Confidence 3332 47888888888887 4555 46777888888888888887 3 333 22 677888
Q ss_pred EEEeecccCc----CCCCcccCCCCCCCccC
Q 006677 190 HLNLSYNGLK----GSIPSSLQKFPNSSFVG 216 (635)
Q Consensus 190 ~l~l~~N~l~----g~~p~~~~~l~~l~~~~ 216 (635)
.|+|++|.++ +.+|..+.++++|..++
T Consensus 220 ~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~ 250 (386)
T 2ca6_A 220 VLDLQDNTFTHLGSSALAIALKSWPNLRELG 250 (386)
T ss_dssp EEECCSSCCHHHHHHHHHHHGGGCTTCCEEE
T ss_pred EEECcCCCCCcHHHHHHHHHHccCCCcCEEE
Confidence 8888888885 56777777777666553
No 383
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.34 E-value=2.9e-12 Score=142.54 Aligned_cols=132 Identities=27% Similarity=0.346 Sum_probs=74.9
Q ss_pred eEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCC---CCCC--------------CcccEEeeccCccCC
Q 006677 70 RVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSE---ITSL--------------PSLRYLYLQHNNFSG 132 (635)
Q Consensus 70 ~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p~~---~~~l--------------~~L~~L~l~~N~l~g 132 (635)
.+..|+|++|+++ .+|. . +++|++|+|++|++++ +|.. +..| ++|+.|+|++|+|++
T Consensus 122 ~L~~L~L~~N~l~-~lp~-~---l~~L~~L~Ls~N~l~~-l~~~~~~L~~L~L~~N~l~~l~~~~~~L~~L~Ls~N~l~~ 195 (622)
T 3g06_A 122 GLCKLWIFGNQLT-SLPV-L---PPGLQELSVSDNQLAS-LPALPSELCKLWAYNNQLTSLPMLPSGLQELSVSDNQLAS 195 (622)
T ss_dssp TCCEEECCSSCCS-CCCC-C---CTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSC
T ss_pred CcCEEECCCCCCC-cCCC-C---CCCCCEEECcCCcCCC-cCCccCCCCEEECCCCCCCCCcccCCCCcEEECCCCCCCC
Confidence 4556666666666 3554 1 3667777777777663 3332 2222 667777777777774
Q ss_pred cCCCCc-------------------cCCcceeeccCccCcccCCchhhccccCCcEEcCCCcccccCCCCCCCCCcEEEe
Q 006677 133 KIPSSF-------------------SPQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNFDIPKLRHLNL 193 (635)
Q Consensus 133 ~~p~~~-------------------~~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~l~~L~~l~l 193 (635)
+|..+ .++|++|+|++|+|++ +| ..+++|+.|+|++|+|++ +|. .+++|+.|+|
T Consensus 196 -l~~~~~~L~~L~L~~N~l~~l~~~~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~~-lp~-~~~~L~~L~L 268 (622)
T 3g06_A 196 -LPTLPSELYKLWAYNNRLTSLPALPSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLTS-LPM-LPSGLLSLSV 268 (622)
T ss_dssp -CCCCCTTCCEEECCSSCCSSCCCCCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCC-CCTTCCEEEC
T ss_pred -CCCccchhhEEECcCCcccccCCCCCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCCc-CCc-ccccCcEEeC
Confidence 33322 1345555555555553 44 334556666666666663 333 5566666666
Q ss_pred ecccCcCCCCcccCCCCCCCcc
Q 006677 194 SYNGLKGSIPSSLQKFPNSSFV 215 (635)
Q Consensus 194 ~~N~l~g~~p~~~~~l~~l~~~ 215 (635)
++|+|+ .+|..|.++++|..+
T Consensus 269 s~N~L~-~lp~~l~~l~~L~~L 289 (622)
T 3g06_A 269 YRNQLT-RLPESLIHLSSETTV 289 (622)
T ss_dssp CSSCCC-SCCGGGGGSCTTCEE
T ss_pred CCCCCC-cCCHHHhhccccCEE
Confidence 666666 556666666655544
No 384
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.32 E-value=2.4e-12 Score=133.66 Aligned_cols=102 Identities=20% Similarity=0.168 Sum_probs=90.3
Q ss_pred cEEEeecC-CCCCCCCCCCCCCCcccEEeecc-CccCCcCCCCcc--CCcceeeccCccCcccCCchhhccccCCcEEcC
Q 006677 97 EVLSLRSN-VLTGGLPSEITSLPSLRYLYLQH-NNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQ 172 (635)
Q Consensus 97 ~~L~L~~n-~l~g~~p~~~~~l~~L~~L~l~~-N~l~g~~p~~~~--~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~ 172 (635)
..+++++| +|+ .||. |..+++|+.|+|++ |+|++..|..|. ++|++|+|++|+|++..|..|.+|++|+.|+|+
T Consensus 11 ~~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 35789998 899 6998 99999999999996 999987777776 899999999999999999999999999999999
Q ss_pred CCcccccCCCC-CCCCCcEEEeecccCcC
Q 006677 173 SNNLSGSIPNF-DIPKLRHLNLSYNGLKG 200 (635)
Q Consensus 173 ~N~l~~~~p~~-~l~~L~~l~l~~N~l~g 200 (635)
+|+|++.++.. ...+|+.|+|++|.|..
T Consensus 89 ~N~l~~~~~~~~~~~~L~~l~l~~N~~~c 117 (347)
T 2ifg_A 89 FNALESLSWKTVQGLSLQELVLSGNPLHC 117 (347)
T ss_dssp SSCCSCCCSTTTCSCCCCEEECCSSCCCC
T ss_pred CCccceeCHHHcccCCceEEEeeCCCccC
Confidence 99999766654 33349999999999984
No 385
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.28 E-value=1e-13 Score=146.25 Aligned_cols=148 Identities=20% Similarity=0.270 Sum_probs=115.7
Q ss_pred CeEEEEEeCCCCccCcCCc---ccccCCCCCcEEEeecC---CCCCCCCCCC-------CCCCcccEEeeccCccCC---
Q 006677 69 TRVFGLRLPGIGLVGPIPN---NTLGKLDALEVLSLRSN---VLTGGLPSEI-------TSLPSLRYLYLQHNNFSG--- 132 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~l~~---~~l~~l~~L~~L~L~~n---~l~g~~p~~~-------~~l~~L~~L~l~~N~l~g--- 132 (635)
.+++.|+|++|++++..+. ..+..+++|++|+|++| ++++.+|..+ .++++|++|+|++|.+++
T Consensus 32 ~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~ 111 (386)
T 2ca6_A 32 DSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQ 111 (386)
T ss_dssp SCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTH
T ss_pred CCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHHH
Confidence 4689999999999865332 14778999999999995 5566777665 789999999999999997
Q ss_pred -cCCCCcc--CCcceeeccCccCcccCCchh----hcc---------ccCCcEEcCCCccc-ccCCCC-----CCCCCcE
Q 006677 133 -KIPSSFS--PQLVVLDLSFNSFTGNIPQSI----QNL---------TQLTGLSLQSNNLS-GSIPNF-----DIPKLRH 190 (635)
Q Consensus 133 -~~p~~~~--~~L~~L~ls~N~l~g~~p~~~----~~l---------~~L~~L~l~~N~l~-~~~p~~-----~l~~L~~ 190 (635)
.+|..+. ++|++|+|++|+|++..+..+ ..+ ++|++|+|++|+|+ +.+|.. .+++|+.
T Consensus 112 ~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~ 191 (386)
T 2ca6_A 112 EPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHT 191 (386)
T ss_dssp HHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCE
T ss_pred HHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCE
Confidence 4666665 799999999999986544444 444 89999999999998 455531 6789999
Q ss_pred EEeecccCc--C---CCCcccCCCCCCCccC
Q 006677 191 LNLSYNGLK--G---SIPSSLQKFPNSSFVG 216 (635)
Q Consensus 191 l~l~~N~l~--g---~~p~~~~~l~~l~~~~ 216 (635)
|+|++|+++ | .+|..+.++++|..++
T Consensus 192 L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~ 222 (386)
T 2ca6_A 192 VKMVQNGIRPEGIEHLLLEGLAYCQELKVLD 222 (386)
T ss_dssp EECCSSCCCHHHHHHHHHTTGGGCTTCCEEE
T ss_pred EECcCCCCCHhHHHHHHHHHhhcCCCccEEE
Confidence 999999998 3 3454677777776654
No 386
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.28 E-value=1.5e-13 Score=143.55 Aligned_cols=135 Identities=24% Similarity=0.280 Sum_probs=76.8
Q ss_pred eEEEEEeCCCCccCcCCc---ccccCCC-CCcEEEeecCCCCCCCCCCCCCC-----CcccEEeeccCccCCcCCCCcc-
Q 006677 70 RVFGLRLPGIGLVGPIPN---NTLGKLD-ALEVLSLRSNVLTGGLPSEITSL-----PSLRYLYLQHNNFSGKIPSSFS- 139 (635)
Q Consensus 70 ~v~~l~l~~~~l~g~l~~---~~l~~l~-~L~~L~L~~n~l~g~~p~~~~~l-----~~L~~L~l~~N~l~g~~p~~~~- 139 (635)
.++.|+|++|.+++.-+. ..+..++ +|++|+|++|++++..+..+..+ ++|++|+|++|.+++..+..+.
T Consensus 23 ~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~ 102 (362)
T 3goz_A 23 GVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVK 102 (362)
T ss_dssp TCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHH
T ss_pred CceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHH
Confidence 366666666666632220 2455666 66666666666665555555554 6666666666666654444322
Q ss_pred ------CCcceeeccCccCcccCCchhhc-----cccCCcEEcCCCcccccCCC----C--CCC-CCcEEEeecccCcCC
Q 006677 140 ------PQLVVLDLSFNSFTGNIPQSIQN-----LTQLTGLSLQSNNLSGSIPN----F--DIP-KLRHLNLSYNGLKGS 201 (635)
Q Consensus 140 ------~~L~~L~ls~N~l~g~~p~~~~~-----l~~L~~L~l~~N~l~~~~p~----~--~l~-~L~~l~l~~N~l~g~ 201 (635)
++|++|+|++|+|++..+..+.. .++|++|+|++|+|++..+. . .++ +|+.|+|++|++++.
T Consensus 103 ~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~ 182 (362)
T 3goz_A 103 TLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASK 182 (362)
T ss_dssp HHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGS
T ss_pred HHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchh
Confidence 35666666666666555444433 24666666666666642221 1 232 666666666666655
Q ss_pred CCc
Q 006677 202 IPS 204 (635)
Q Consensus 202 ~p~ 204 (635)
.+.
T Consensus 183 ~~~ 185 (362)
T 3goz_A 183 NCA 185 (362)
T ss_dssp CHH
T ss_pred hHH
Confidence 443
No 387
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.27 E-value=2.4e-11 Score=120.76 Aligned_cols=136 Identities=17% Similarity=0.113 Sum_probs=107.5
Q ss_pred ccccccCceEEEEEEecCCCeEEEEEeeccc-CChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEeccCCChh
Q 006677 344 EVLGKGSYGTAYKAVLEESTTVVVKRLKEVV-VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLS 422 (635)
Q Consensus 344 ~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~-~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~ 422 (635)
..++.|+++.||++... ++.+++|+..... .....+.+|++++..+.++..+.++++++...+..|+||||++|.+|.
T Consensus 20 ~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~ 98 (263)
T 3tm0_A 20 KDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCS 98 (263)
T ss_dssp ECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEHH
T ss_pred eeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecCCeehh
Confidence 45677788999999855 6889999987532 234578999999999966788889999999888999999999999998
Q ss_pred hhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC-------------------------------------------
Q 006677 423 TLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMG------------------------------------------- 459 (635)
Q Consensus 423 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~------------------------------------------- 459 (635)
+.+.. ......++.+++++++.||+..
T Consensus 99 ~~~~~----------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (263)
T 3tm0_A 99 EEYED----------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPR 168 (263)
T ss_dssp HHCCT----------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSSHH
T ss_pred hccCC----------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCCHH
Confidence 76421 1123468889999999999811
Q ss_pred -------------CCCceecCCCCCCeEEcCCCCeEEeecCCCC
Q 006677 460 -------------GPKFTHGNIKASNVLINQDLDGCISDFGLTP 490 (635)
Q Consensus 460 -------------~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~ 490 (635)
.+.++|+|+++.||+++++..+.|+||+.+.
T Consensus 169 ~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 169 ELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp HHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 1338999999999999876666799998764
No 388
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.26 E-value=3e-14 Score=135.55 Aligned_cols=123 Identities=20% Similarity=0.231 Sum_probs=105.6
Q ss_pred ccCCCCCcEEEeecCCCCCCCCC------CCCCCCcccEEeeccCccCCcCCCCcc--CCcceeeccCccCcccCCchhh
Q 006677 90 LGKLDALEVLSLRSNVLTGGLPS------EITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQ 161 (635)
Q Consensus 90 l~~l~~L~~L~L~~n~l~g~~p~------~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~ls~N~l~g~~p~~~~ 161 (635)
+.....++.++|+.|.++|.+|. .+.++++|++|+|++|++++ +| .+. ++|++|+|++|+|+ .+|..+.
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~ 90 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDA 90 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhh
Confidence 55677889999999999999987 89999999999999999997 77 665 89999999999999 7899999
Q ss_pred ccccCCcEEcCCCcccccCCCC-CCCCCcEEEeecccCcCCCC-cccCCCCCCCccC
Q 006677 162 NLTQLTGLSLQSNNLSGSIPNF-DIPKLRHLNLSYNGLKGSIP-SSLQKFPNSSFVG 216 (635)
Q Consensus 162 ~l~~L~~L~l~~N~l~~~~p~~-~l~~L~~l~l~~N~l~g~~p-~~~~~l~~l~~~~ 216 (635)
.+++|+.|+|++|+|++ +|.. .+++|+.|+|++|++++..+ ..+.++++|..++
T Consensus 91 ~~~~L~~L~L~~N~l~~-l~~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~ 146 (198)
T 1ds9_A 91 VADTLEELWISYNQIAS-LSGIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLL 146 (198)
T ss_dssp HHHHCSEEEEEEEECCC-HHHHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEE
T ss_pred cCCcCCEEECcCCcCCc-CCccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEE
Confidence 99999999999999997 4443 78899999999999995322 4677777776653
No 389
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.26 E-value=5e-13 Score=139.64 Aligned_cols=130 Identities=20% Similarity=0.145 Sum_probs=108.9
Q ss_pred EEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCC----CCCCCCC-cccEEeeccCccCCcCCCCcc-------C
Q 006677 73 GLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLP----SEITSLP-SLRYLYLQHNNFSGKIPSSFS-------P 140 (635)
Q Consensus 73 ~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p----~~~~~l~-~L~~L~l~~N~l~g~~p~~~~-------~ 140 (635)
..+|++++++|.+|. .+...++|++|||++|.+++..+ ..+.+++ +|++|+|++|++++..+..+. +
T Consensus 2 ~~~ls~n~~~~~~~~-~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~ 80 (362)
T 3goz_A 2 NYKLTLHPGSNPVEE-FTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPA 80 (362)
T ss_dssp EEECCCCTTCCHHHH-HHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCT
T ss_pred ccccccccchHHHHH-HHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCC
Confidence 367899999998887 77777889999999999996655 6788898 999999999999987666553 5
Q ss_pred CcceeeccCccCcccCCchhhcc-----ccCCcEEcCCCcccccCCCC------C-CCCCcEEEeecccCcCCCC
Q 006677 141 QLVVLDLSFNSFTGNIPQSIQNL-----TQLTGLSLQSNNLSGSIPNF------D-IPKLRHLNLSYNGLKGSIP 203 (635)
Q Consensus 141 ~L~~L~ls~N~l~g~~p~~~~~l-----~~L~~L~l~~N~l~~~~p~~------~-l~~L~~l~l~~N~l~g~~p 203 (635)
+|++|+|++|+|++..+..+... ++|++|+|++|+|++..+.. . .++|++|+|++|+++..-+
T Consensus 81 ~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~ 155 (362)
T 3goz_A 81 NVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSS 155 (362)
T ss_dssp TCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCH
T ss_pred CccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHH
Confidence 79999999999998887766654 89999999999998765532 2 3699999999999996444
No 390
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.19 E-value=4e-11 Score=124.58 Aligned_cols=139 Identities=15% Similarity=0.144 Sum_probs=106.5
Q ss_pred eEecCCCCeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCC-CCCCCCCcccEEeeccCccCCcCCCCcc-
Q 006677 62 INCTQDRTRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLP-SEITSLPSLRYLYLQHNNFSGKIPSSFS- 139 (635)
Q Consensus 62 v~C~~~~~~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p-~~~~~l~~L~~L~l~~N~l~g~~p~~~~- 139 (635)
..|+. + .++.++++|+ .||.+ + .++|++|+|++|+|+ .|| ..|.+|++|++|+|++|++.+.+|....
T Consensus 7 C~C~~---~--~v~C~~~~Lt-~iP~~-l--~~~l~~L~Ls~N~i~-~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~ 76 (350)
T 4ay9_X 7 CHCSN---R--VFLCQESKVT-EIPSD-L--PRNAIELRFVLTKLR-VIQKGAFSGFGDLEKIEISQNDVLEVIEADVFS 76 (350)
T ss_dssp SEEET---T--EEEEESTTCC-SCCTT-C--CTTCSEEEEESCCCS-EECTTSSTTCTTCCEEEEECCTTCCEECTTSBC
T ss_pred cEeeC---C--EEEecCCCCC-ccCcC-c--CCCCCEEEccCCcCC-CcCHHHHcCCCCCCEEECcCCCCCCccChhHhh
Confidence 46764 2 3677899999 89873 4 478999999999999 565 5799999999999999999888887543
Q ss_pred --CCc-ceeeccCccCcccCCchhhccccCCcEEcCCCcccccCCCC--CCCCCcEEEeec-ccCcCCCCcccCCCC
Q 006677 140 --PQL-VVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSY-NGLKGSIPSSLQKFP 210 (635)
Q Consensus 140 --~~L-~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~l~l~~-N~l~g~~p~~~~~l~ 210 (635)
++| +.+++++|+|++..|..|.++++|++|++++|+|++..+.. ...++..|++++ |++....+..|..+.
T Consensus 77 ~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~ 153 (350)
T 4ay9_X 77 NLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLS 153 (350)
T ss_dssp SCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSB
T ss_pred cchhhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcc
Confidence 444 45788899999888899999999999999999999765543 445666777765 455533334454443
No 391
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=99.14 E-value=2e-13 Score=134.66 Aligned_cols=159 Identities=19% Similarity=0.192 Sum_probs=118.4
Q ss_pred CcceeEecCCCCeEEEEEeCC---CCccCcCCcccccCCCCCcEEEeecCCCCCCCC-CCCCCCCcccE--EeeccCccC
Q 006677 58 SWVGINCTQDRTRVFGLRLPG---IGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLP-SEITSLPSLRY--LYLQHNNFS 131 (635)
Q Consensus 58 ~w~gv~C~~~~~~v~~l~l~~---~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p-~~~~~l~~L~~--L~l~~N~l~ 131 (635)
+|.|+.|+.+..+|+.+...+ ..+.|.++++.+..|.. .|...+|..++.++ +.+...+.|.. ++++.|+..
T Consensus 79 ~~~g~i~~~~~~ki~~~v~~~~~~~~~~~~l~~~~~~~Lk~--~l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N~~~ 156 (267)
T 3rw6_A 79 AVNYKILDRENRRISIIINSSAPPHTILNELKPEQVEQLKL--IMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNRRS 156 (267)
T ss_dssp HTTSSCBCTTSCBCCCEEEECCCCHHHHTSCCHHHHHHHHH--HHHHTEETTTTEEECTTGGGCHHHHHTTCCCCTTSHH
T ss_pred hcCcEEECCCCCEEEEEEecCCCcccccccCCHHHHHHHHH--HHHhccchhccccCHHHcCCCcchhhcCccccCCHHH
Confidence 799999998767887777766 56777787666655554 45566676666665 23666777777 788888544
Q ss_pred CcCCCCc------cCCcceeeccCccCcc--cCCchhhccccCCcEEcCCCcccccCCCCCCC--CCcEEEeecccCcCC
Q 006677 132 GKIPSSF------SPQLVVLDLSFNSFTG--NIPQSIQNLTQLTGLSLQSNNLSGSIPNFDIP--KLRHLNLSYNGLKGS 201 (635)
Q Consensus 132 g~~p~~~------~~~L~~L~ls~N~l~g--~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~l~--~L~~l~l~~N~l~g~ 201 (635)
.++..+ .++|+.|+||+|+|++ .+|..+..+++|+.|+|++|+|++.-.-..+. +|+.|+|++|.+++.
T Consensus 157 -~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~~~l~~l~~l~L~~L~L~~Npl~~~ 235 (267)
T 3rw6_A 157 -CMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLCDT 235 (267)
T ss_dssp -HHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSGGGGGGGTTSCCSEEECTTSTTGGG
T ss_pred -HHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCchhhhhcccCCcceEEccCCcCccc
Confidence 333322 1689999999999998 66788899999999999999999752212233 999999999999988
Q ss_pred CCc-------ccCCCCCCCccCCCC
Q 006677 202 IPS-------SLQKFPNSSFVGNSL 219 (635)
Q Consensus 202 ~p~-------~~~~l~~l~~~~n~~ 219 (635)
+|. .+..+++|..++...
T Consensus 236 ~~~~~~y~~~il~~~P~L~~LDg~~ 260 (267)
T 3rw6_A 236 FRDQSTYISAIRERFPKLLRLDGHE 260 (267)
T ss_dssp CSSHHHHHHHHHHHCTTCCEESSCB
T ss_pred cCcchhHHHHHHHHCcccCeECCcC
Confidence 873 367889998887543
No 392
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.12 E-value=7e-13 Score=143.14 Aligned_cols=147 Identities=20% Similarity=0.092 Sum_probs=116.0
Q ss_pred CeEEEEEeCCCCccCc----CCcccccCCCCCcEEEeecCCCCCC----CCCCCCCCCcccEEeeccCccCCcCCCCcc-
Q 006677 69 TRVFGLRLPGIGLVGP----IPNNTLGKLDALEVLSLRSNVLTGG----LPSEITSLPSLRYLYLQHNNFSGKIPSSFS- 139 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~----l~~~~l~~l~~L~~L~L~~n~l~g~----~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~- 139 (635)
.+++.|+|++|.+++. +.+..+..+++|++|+|++|++++. +|..+.++++|++|+|++|.+++..+..+.
T Consensus 227 ~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~ 306 (461)
T 1z7x_W 227 ASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCE 306 (461)
T ss_dssp TTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHH
T ss_pred CCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHH
Confidence 4688999999988753 2232345689999999999999854 677788899999999999998754443332
Q ss_pred ------CCcceeeccCccCccc----CCchhhccccCCcEEcCCCcccccCCCC-------CCCCCcEEEeecccCcC--
Q 006677 140 ------PQLVVLDLSFNSFTGN----IPQSIQNLTQLTGLSLQSNNLSGSIPNF-------DIPKLRHLNLSYNGLKG-- 200 (635)
Q Consensus 140 ------~~L~~L~ls~N~l~g~----~p~~~~~l~~L~~L~l~~N~l~~~~p~~-------~l~~L~~l~l~~N~l~g-- 200 (635)
++|++|+|++|++++. ++..+..+++|+.|+|++|++++..+.. ..++|+.|+|++|++++
T Consensus 307 ~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~ 386 (461)
T 1z7x_W 307 TLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSS 386 (461)
T ss_dssp HHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHH
T ss_pred HhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhh
Confidence 4899999999999876 6777888899999999999998654321 26799999999999986
Q ss_pred --CCCcccCCCCCCCcc
Q 006677 201 --SIPSSLQKFPNSSFV 215 (635)
Q Consensus 201 --~~p~~~~~l~~l~~~ 215 (635)
.+|..+.++++|..+
T Consensus 387 ~~~l~~~l~~~~~L~~L 403 (461)
T 1z7x_W 387 CSSLAATLLANHSLREL 403 (461)
T ss_dssp HHHHHHHHHHCCCCCEE
T ss_pred HHHHHHHHHhCCCccEE
Confidence 778777767766655
No 393
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.11 E-value=3.3e-10 Score=112.00 Aligned_cols=130 Identities=11% Similarity=0.089 Sum_probs=98.3
Q ss_pred cc-ccCceEEEEEEecCCCeEEEEEeecccCChHHHHHHHHHHHhhcCCCc-eeceeEEEEeCCeeEEEEEeccCCChhh
Q 006677 346 LG-KGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPN-VVPLRAYYYSKDEKLLVYDYFASGSLST 423 (635)
Q Consensus 346 lG-~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~n-iv~l~~~~~~~~~~~lv~e~~~~g~L~~ 423 (635)
++ .|..+.||++...+|..+++|+.... ....+.+|+++++.+.+|.- +.+++++....+..++||||++|.+|.
T Consensus 27 ~~~gg~~~~v~~~~~~~g~~~vlK~~~~~--~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~- 103 (264)
T 1nd4_A 27 QTIGCSDAAVFRLSAQGRPVLFVKTDLSG--ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL- 103 (264)
T ss_dssp CSCTTSSCEEEEEECTTSCCEEEEEECSC--TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT-
T ss_pred cccCCCCceEEEEecCCCCeEEEEeCCcc--cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC-
Confidence 44 55569999998777788999997653 33568899999999855522 566888888777889999999998884
Q ss_pred hccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC--------------------------------------------
Q 006677 424 LLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMG-------------------------------------------- 459 (635)
Q Consensus 424 ~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~-------------------------------------------- 459 (635)
... .+ ...++.+++..++.||+..
T Consensus 104 -~~~--------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (264)
T 1nd4_A 104 -SSH--------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELF 171 (264)
T ss_dssp -TSC--------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHH
T ss_pred -cCc--------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHH
Confidence 211 11 2356778888888888743
Q ss_pred -----------CCCceecCCCCCCeEEcCCCCeEEeecCCCC
Q 006677 460 -----------GPKFTHGNIKASNVLINQDLDGCISDFGLTP 490 (635)
Q Consensus 460 -----------~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~ 490 (635)
.+.++|+|++|.||+++++..+.|+|||.+.
T Consensus 172 ~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 172 ARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp HHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred HHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 1129999999999999887667799999864
No 394
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.10 E-value=5.2e-13 Score=144.15 Aligned_cols=137 Identities=20% Similarity=0.222 Sum_probs=108.5
Q ss_pred CeEEEEEeCCCCccCc----CCcccccCCCCCcEEEeecCCCCCCC-----CCCCCCCCcccEEeeccCccCCc----CC
Q 006677 69 TRVFGLRLPGIGLVGP----IPNNTLGKLDALEVLSLRSNVLTGGL-----PSEITSLPSLRYLYLQHNNFSGK----IP 135 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~----l~~~~l~~l~~L~~L~L~~n~l~g~~-----p~~~~~l~~L~~L~l~~N~l~g~----~p 135 (635)
.+++.|+|++|++++. ++. .+..+++|++|+|++|.+++.- +..+..+++|++|+|++|.+++. ++
T Consensus 199 ~~L~~L~L~~n~l~~~~~~~l~~-~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~ 277 (461)
T 1z7x_W 199 CQLEALKLESCGVTSDNCRDLCG-IVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLC 277 (461)
T ss_dssp CCCCEEECTTSCCBTTHHHHHHH-HHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHH
T ss_pred CCceEEEccCCCCcHHHHHHHHH-HHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHH
Confidence 4789999999999863 565 6888999999999999987532 33344689999999999999864 55
Q ss_pred CCcc--CCcceeeccCccCcccCCchhhcc-----ccCCcEEcCCCccccc----CCCC--CCCCCcEEEeecccCcCCC
Q 006677 136 SSFS--PQLVVLDLSFNSFTGNIPQSIQNL-----TQLTGLSLQSNNLSGS----IPNF--DIPKLRHLNLSYNGLKGSI 202 (635)
Q Consensus 136 ~~~~--~~L~~L~ls~N~l~g~~p~~~~~l-----~~L~~L~l~~N~l~~~----~p~~--~l~~L~~l~l~~N~l~g~~ 202 (635)
..+. ++|++|+|++|++++..+..+... ++|+.|+|++|.+++. ++.. .+++|+.|+|++|++++..
T Consensus 278 ~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~ 357 (461)
T 1z7x_W 278 RVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAG 357 (461)
T ss_dssp HHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHH
T ss_pred HHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCcccccc
Confidence 5554 789999999999987666666554 6999999999999865 2322 6789999999999998654
Q ss_pred Cccc
Q 006677 203 PSSL 206 (635)
Q Consensus 203 p~~~ 206 (635)
+..+
T Consensus 358 ~~~l 361 (461)
T 1z7x_W 358 VREL 361 (461)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4433
No 395
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=99.00 E-value=1.6e-09 Score=112.74 Aligned_cols=140 Identities=15% Similarity=0.223 Sum_probs=105.1
Q ss_pred ccccccCceEEEEEEecCCCeEEEEEee--ccc--CChHHHHHHHHHHHhhcC-CCceeceeEEEEeC---CeeEEEEEe
Q 006677 344 EVLGKGSYGTAYKAVLEESTTVVVKRLK--EVV--VGKRDFEQQMEIVGRVGQ-HPNVVPLRAYYYSK---DEKLLVYDY 415 (635)
Q Consensus 344 ~~lG~G~fg~Vy~~~~~~~~~vavK~l~--~~~--~~~~~~~~e~~~l~~l~~-h~niv~l~~~~~~~---~~~~lv~e~ 415 (635)
+.|+.|.++.||+....+ ..+++|+.. ... .....+.+|..+++.+.. +..++++++++.+. +..++||||
T Consensus 44 ~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme~ 122 (359)
T 3dxp_A 44 EQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIMEF 122 (359)
T ss_dssp EECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEEC
T ss_pred EEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEEe
Confidence 468899999999998764 678888776 322 234578899999999853 45588888888766 347999999
Q ss_pred ccCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC------------------------------------
Q 006677 416 FASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMG------------------------------------ 459 (635)
Q Consensus 416 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~------------------------------------ 459 (635)
++|..+.+.. ...++...+..++.++++.|+.||+..
T Consensus 123 v~G~~l~~~~-------~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (359)
T 3dxp_A 123 VSGRVLWDQS-------LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIP 195 (359)
T ss_dssp CCCBCCCCTT-------CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCH
T ss_pred cCCeecCCCc-------cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCCh
Confidence 9998775422 123778888999999999999999731
Q ss_pred -------------------CCCceecCCCCCCeEEcCCCC--eEEeecCCCCC
Q 006677 460 -------------------GPKFTHGNIKASNVLINQDLD--GCISDFGLTPL 491 (635)
Q Consensus 460 -------------------~~~ivH~Dlk~~NIll~~~~~--~ki~DfGla~~ 491 (635)
.+.++|+|+++.||++++++. +.|+||+.+..
T Consensus 196 ~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 196 AMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 235899999999999998754 68999998754
No 396
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.87 E-value=3.2e-11 Score=126.00 Aligned_cols=129 Identities=24% Similarity=0.233 Sum_probs=61.7
Q ss_pred eEEEEEeCCCCccCcCCccccc-----CCCCCcEEEeecCCCCCCCCCCC-CCCCcccEEeeccCccCCcCCCCc-----
Q 006677 70 RVFGLRLPGIGLVGPIPNNTLG-----KLDALEVLSLRSNVLTGGLPSEI-TSLPSLRYLYLQHNNFSGKIPSSF----- 138 (635)
Q Consensus 70 ~v~~l~l~~~~l~g~l~~~~l~-----~l~~L~~L~L~~n~l~g~~p~~~-~~l~~L~~L~l~~N~l~g~~p~~~----- 138 (635)
.+..|+|++|.++..-.. .+. ...+|+.|+|++|.|+..-...+ ..+++|+.|+|++|.|+......+
T Consensus 73 ~L~~L~Ls~n~l~~~~~~-~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 73 SLRQLNLAGVRMTPVKCT-VVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TCCEEECTTSCCCHHHHH-HHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hCCEEEecCCCCCHHHHH-HHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 355666666665431111 111 12456666666666543211122 234556666666666553222222
Q ss_pred --cCCcceeeccCccCcc----cCCchhhccccCCcEEcCCCcccccC----CC--CCCCCCcEEEeecccCc
Q 006677 139 --SPQLVVLDLSFNSFTG----NIPQSIQNLTQLTGLSLQSNNLSGSI----PN--FDIPKLRHLNLSYNGLK 199 (635)
Q Consensus 139 --~~~L~~L~ls~N~l~g----~~p~~~~~l~~L~~L~l~~N~l~~~~----p~--~~l~~L~~l~l~~N~l~ 199 (635)
.++|++|+|++|+|+. .++..+..+++|++|+|++|.|+..- +. ...++|+.|+|++|.++
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~ 224 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAG 224 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCC
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCC
Confidence 1346666666666653 23334455556666666666655311 11 13345666666666654
No 397
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.87 E-value=1e-09 Score=111.50 Aligned_cols=183 Identities=17% Similarity=0.203 Sum_probs=120.2
Q ss_pred ccccccCceEEEEEEecCCCeEEEEEeecccCChHHHHHHHHHHHhhcCCCc--eeceeEEEEeCC---eeEEEEEeccC
Q 006677 344 EVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPN--VVPLRAYYYSKD---EKLLVYDYFAS 418 (635)
Q Consensus 344 ~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~n--iv~l~~~~~~~~---~~~lv~e~~~~ 418 (635)
+.++.|.+..||+.. ..+++|+.... .....+.+|.+++..+..+.. +.+.+......+ ..|+|||+++|
T Consensus 26 ~~~~~G~~n~v~~v~----~~~vlR~~~~~-~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~G 100 (304)
T 3sg8_A 26 EISGEGNDCIAYEIN----RDFIFKFPKHS-RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIKG 100 (304)
T ss_dssp CEEEECSSEEEEEST----TSEEEEEESSH-HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCCC
T ss_pred EecCCCCcceEEEEC----CEEEEEecCCc-chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccCC
Confidence 357889999999873 56888875432 234678899999988854433 344444433332 34789999999
Q ss_pred CChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC---------------------------------------
Q 006677 419 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMG--------------------------------------- 459 (635)
Q Consensus 419 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~--------------------------------------- 459 (635)
..+.+... ..++..++..++.+++..++.||+..
T Consensus 101 ~~l~~~~~-------~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 173 (304)
T 3sg8_A 101 VPLTPLLL-------NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKV 173 (304)
T ss_dssp EECCHHHH-------HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHH
T ss_pred eECCcccc-------ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHH
Confidence 88865332 12677788888899999998888621
Q ss_pred ----------------CCCceecCCCCCCeEEcC--CCCeEEeecCCCCCCCCCCCCCCCCcc---cCcccccC-----C
Q 006677 460 ----------------GPKFTHGNIKASNVLINQ--DLDGCISDFGLTPLMNVPATPSRSAGY---RAPEVIET-----R 513 (635)
Q Consensus 460 ----------------~~~ivH~Dlk~~NIll~~--~~~~ki~DfGla~~~~~~~~~~~~~~y---~aPE~~~~-----~ 513 (635)
.+.++|+|+++.||++++ ...+.|+||+.+..............+ ..|+.... +
T Consensus 174 ~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~ 253 (304)
T 3sg8_A 174 DDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYK 253 (304)
T ss_dssp HHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHT
T ss_pred HHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcC
Confidence 134799999999999998 456789999987653221000000000 12221100 0
Q ss_pred ---------CCCCccchhhHHHHHHHHHhCCCCC
Q 006677 514 ---------KHSHKSDVYSFGVLLLEMLTGKAPL 538 (635)
Q Consensus 514 ---------~~~~k~Dvws~Gvvl~el~tg~~p~ 538 (635)
+.....+.|+++.++|.+.+|..+|
T Consensus 254 ~~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 254 HKDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHH
Confidence 0112358999999999999998776
No 398
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.86 E-value=4.3e-09 Score=108.14 Aligned_cols=142 Identities=18% Similarity=0.196 Sum_probs=88.4
Q ss_pred CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCcccEEeeccCcc----CCcCCCCc------
Q 006677 69 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNF----SGKIPSSF------ 138 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~N~l----~g~~p~~~------ 138 (635)
..++.|+|++ +++ .|++..|.++++|+.|+|++|.+...-+..|.++.+|..|.++.+.. ...-+..|
T Consensus 101 ~~L~~l~L~~-~i~-~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L 178 (329)
T 3sb4_A 101 QTLEKVILSE-KIK-NIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPL 178 (329)
T ss_dssp TTCCC-CBCT-TCC-EECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCC
T ss_pred CCCcEEECCc-ccc-chhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhcccccccccccccccc
Confidence 3477788887 776 67777888888888888888887644445566665555555444211 00000000
Q ss_pred ----------------------------------------------cCCcceeeccCccCcccCCchhhccccCCcEEcC
Q 006677 139 ----------------------------------------------SPQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQ 172 (635)
Q Consensus 139 ----------------------------------------------~~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~ 172 (635)
.++|+.|+|++|+++...+.+|.+|++|+.|+|.
T Consensus 179 ~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~ 258 (329)
T 3sb4_A 179 ETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLP 258 (329)
T ss_dssp EEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECC
T ss_pred ceeEEecCCCcHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECC
Confidence 2467777777777775555567777777777777
Q ss_pred CCcccccCCCC---CCCCCc-EEEeecccCcCCCCcccCCCCCCCcc
Q 006677 173 SNNLSGSIPNF---DIPKLR-HLNLSYNGLKGSIPSSLQKFPNSSFV 215 (635)
Q Consensus 173 ~N~l~~~~p~~---~l~~L~-~l~l~~N~l~g~~p~~~~~l~~l~~~ 215 (635)
+| ++ .++.. ++.+|+ .++|.+ +++..-+..|.+|++|+.+
T Consensus 259 ~n-i~-~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l 302 (329)
T 3sb4_A 259 HN-LK-TIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYV 302 (329)
T ss_dssp TT-CC-EECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEE
T ss_pred cc-cc-eehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEE
Confidence 77 55 34432 667777 777776 5654445667777666554
No 399
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.83 E-value=1.1e-11 Score=129.51 Aligned_cols=138 Identities=17% Similarity=0.171 Sum_probs=102.0
Q ss_pred CeEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCC-----CCCCcccEEeeccCccCCc----CCCCcc
Q 006677 69 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEI-----TSLPSLRYLYLQHNNFSGK----IPSSFS 139 (635)
Q Consensus 69 ~~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p~~~-----~~l~~L~~L~l~~N~l~g~----~p~~~~ 139 (635)
..++.|+|++|+++..-.......+.+|+.|+|++|+|+..-...+ ...++|+.|+|++|.|+.. ++..+.
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~ 180 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLA 180 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHH
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHh
Confidence 4799999999998753332233456789999999999985433333 3468899999999999742 222222
Q ss_pred --CCcceeeccCccCccc----CCchhhccccCCcEEcCCCcccccCC----CC--CCCCCcEEEeecccCcCCCCccc
Q 006677 140 --PQLVVLDLSFNSFTGN----IPQSIQNLTQLTGLSLQSNNLSGSIP----NF--DIPKLRHLNLSYNGLKGSIPSSL 206 (635)
Q Consensus 140 --~~L~~L~ls~N~l~g~----~p~~~~~l~~L~~L~l~~N~l~~~~p----~~--~l~~L~~l~l~~N~l~g~~p~~~ 206 (635)
++|++|+|++|+|+.. ++..+..+++|+.|+|++|.|+..-. .. ..++|+.|+|++|.|+..-...+
T Consensus 181 ~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L 259 (372)
T 3un9_A 181 GNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSEGRQVL 259 (372)
T ss_dssp TCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHHHHHHH
T ss_pred cCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHHHHHHH
Confidence 6899999999999853 45677888999999999999985321 11 46889999999999975433333
No 400
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.80 E-value=3.9e-09 Score=108.40 Aligned_cols=129 Identities=16% Similarity=0.261 Sum_probs=93.1
Q ss_pred cCCcccccC--------CCCCcEEEeecCCCCCCCCCCCCCCCcccEEeeccCccCCcCCCCccC--CcceeeccCccC-
Q 006677 84 PIPNNTLGK--------LDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFSP--QLVVLDLSFNSF- 152 (635)
Q Consensus 84 ~l~~~~l~~--------l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~--~L~~L~ls~N~l- 152 (635)
.||+..|.+ +++|+.|+|.+ +++..-+..|.+|++|+.|+|++|.+....+..|.. ++..+.++.+..
T Consensus 83 ~I~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~ 161 (329)
T 3sb4_A 83 FVPAYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAY 161 (329)
T ss_dssp EECTTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHH
T ss_pred ccCHHHhcccccccccccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhh
Confidence 567777888 99999999999 888444567999999999999999998555555553 455555444211
Q ss_pred ------c-------------------ccCCch---------------------------h-hccccCCcEEcCCCccccc
Q 006677 153 ------T-------------------GNIPQS---------------------------I-QNLTQLTGLSLQSNNLSGS 179 (635)
Q Consensus 153 ------~-------------------g~~p~~---------------------------~-~~l~~L~~L~l~~N~l~~~ 179 (635)
. +.++.. + ..+++|+.|+|++|+++ .
T Consensus 162 ~~~~~i~~~~f~~~~~L~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~-~ 240 (329)
T 3sb4_A 162 RFKNRWEHFAFIEGEPLETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNAT-T 240 (329)
T ss_dssp HTSTTTTTSCEEESCCCEEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCC-E
T ss_pred hccccccccccccccccceeEEecCCCcHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcc-e
Confidence 0 001100 0 13789999999999999 4
Q ss_pred CCCC---CCCCCcEEEeecccCcCCCCcccCCCCCCC-cc
Q 006677 180 IPNF---DIPKLRHLNLSYNGLKGSIPSSLQKFPNSS-FV 215 (635)
Q Consensus 180 ~p~~---~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~-~~ 215 (635)
+|.. .+.+|+.|+|.+| ++..-+..|.++++|+ .+
T Consensus 241 I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l 279 (329)
T 3sb4_A 241 IPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTL 279 (329)
T ss_dssp ECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEE
T ss_pred ecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEE
Confidence 5543 8999999999998 7755557789998887 44
No 401
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.65 E-value=6.6e-10 Score=123.76 Aligned_cols=60 Identities=17% Similarity=0.192 Sum_probs=27.6
Q ss_pred CCcceeeccCccCcc-cCCchhhccccCCcEEcCCCccccc-CCCC--CCCCCcEEEeecccCc
Q 006677 140 PQLVVLDLSFNSFTG-NIPQSIQNLTQLTGLSLQSNNLSGS-IPNF--DIPKLRHLNLSYNGLK 199 (635)
Q Consensus 140 ~~L~~L~ls~N~l~g-~~p~~~~~l~~L~~L~l~~N~l~~~-~p~~--~l~~L~~l~l~~N~l~ 199 (635)
++|++|+|++|++++ .++..+.++++|++|+|++|.|++. ++.. .+++|++|+|++|+++
T Consensus 463 ~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it 526 (592)
T 3ogk_B 463 PNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRAS 526 (592)
T ss_dssp TTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCC
T ss_pred ccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCC
Confidence 345555555555543 2333334455555555555554432 1111 3445555555555544
No 402
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.51 E-value=2.5e-09 Score=100.04 Aligned_cols=111 Identities=14% Similarity=0.175 Sum_probs=79.4
Q ss_pred cccCCCCCcEEEeecC-CCCCC----CCCCCCCCCcccEEeeccCccCCcCCCCcc------CCcceeeccCccCccc--
Q 006677 89 TLGKLDALEVLSLRSN-VLTGG----LPSEITSLPSLRYLYLQHNNFSGKIPSSFS------PQLVVLDLSFNSFTGN-- 155 (635)
Q Consensus 89 ~l~~l~~L~~L~L~~n-~l~g~----~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~------~~L~~L~ls~N~l~g~-- 155 (635)
.+...++|++|+|++| .+... +...+...++|++|+|++|.+...-...+. +.|++|+|++|+|+..
T Consensus 31 ~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~ 110 (185)
T 1io0_A 31 IQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGI 110 (185)
T ss_dssp HHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHH
T ss_pred HHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHH
Confidence 5677888888999888 87632 344566678888999999888742222222 5789999999988754
Q ss_pred --CCchhhccccCCcEEc--CCCcccccCCC----C--CCCCCcEEEeecccCc
Q 006677 156 --IPQSIQNLTQLTGLSL--QSNNLSGSIPN----F--DIPKLRHLNLSYNGLK 199 (635)
Q Consensus 156 --~p~~~~~l~~L~~L~l--~~N~l~~~~p~----~--~l~~L~~l~l~~N~l~ 199 (635)
+...+...++|++|+| ++|.|...-.. . ..++|++|+|++|.+.
T Consensus 111 ~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 111 LALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 4566777788999999 78888743211 1 4577999999998875
No 403
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.50 E-value=4.4e-08 Score=96.43 Aligned_cols=101 Identities=25% Similarity=0.340 Sum_probs=59.0
Q ss_pred ccCCCCCcE--EEeecCCCC---CCCCCCCCCCCcccEEeeccCccCC--cCCCCcc--CCcceeeccCccCcccCCchh
Q 006677 90 LGKLDALEV--LSLRSNVLT---GGLPSEITSLPSLRYLYLQHNNFSG--KIPSSFS--PQLVVLDLSFNSFTGNIPQSI 160 (635)
Q Consensus 90 l~~l~~L~~--L~L~~n~l~---g~~p~~~~~l~~L~~L~l~~N~l~g--~~p~~~~--~~L~~L~ls~N~l~g~~p~~~ 160 (635)
|...+.|.. ++++.|... +.++-...++++|+.|+|++|+|++ .+|..+. ++|+.|+|++|+|++. ..+
T Consensus 137 l~~dp~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l 214 (267)
T 3rw6_A 137 LRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--REL 214 (267)
T ss_dssp GGGCHHHHHTTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGG
T ss_pred cCCCcchhhcCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhh
Confidence 444455554 556666332 1111112356667777777777776 3444332 6677777777777654 334
Q ss_pred hccc--cCCcEEcCCCcccccCCCC---------CCCCCcEEE
Q 006677 161 QNLT--QLTGLSLQSNNLSGSIPNF---------DIPKLRHLN 192 (635)
Q Consensus 161 ~~l~--~L~~L~l~~N~l~~~~p~~---------~l~~L~~l~ 192 (635)
..+. +|++|+|++|.+++.+|.. .+++|+.||
T Consensus 215 ~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 215 DKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp GGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred hhcccCCcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 4454 7777788888777766631 567777765
No 404
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.48 E-value=8.4e-07 Score=88.01 Aligned_cols=135 Identities=16% Similarity=0.178 Sum_probs=98.0
Q ss_pred ccccCce-EEEEEEec-CCCeEEEEEeecccCChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEeccCCChhh
Q 006677 346 LGKGSYG-TAYKAVLE-ESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLST 423 (635)
Q Consensus 346 lG~G~fg-~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~ 423 (635)
+..|..| .||+.... ++..+++|+-... ...++.+|...+..+..+--+.++++++.+.+..++|||++++.++.+
T Consensus 32 ~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~--~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~~ 109 (272)
T 4gkh_A 32 DNVGQSGATIYRLYGKPNAPELFLKHGKGS--VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAFQ 109 (272)
T ss_dssp EECSSSSCEEEEEECCTTCCCEEEEEEETH--HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHHH
T ss_pred ccCCCcCCeEEEEEecCCCeEEEEEECCCC--CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccccc
Confidence 4445554 68988754 4567888886543 245788899999988666567889999999999999999999988776
Q ss_pred hccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC--------------------------------------------
Q 006677 424 LLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMG-------------------------------------------- 459 (635)
Q Consensus 424 ~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~-------------------------------------------- 459 (635)
..... ......++.+++..|+.||+..
T Consensus 110 ~~~~~---------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (272)
T 4gkh_A 110 VLEEY---------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVW 180 (272)
T ss_dssp HHHHC---------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHH
T ss_pred cccCC---------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHH
Confidence 54321 1223445666666667666420
Q ss_pred -----------CCCceecCCCCCCeEEcCCCCeEEeecCCCCC
Q 006677 460 -----------GPKFTHGNIKASNVLINQDLDGCISDFGLTPL 491 (635)
Q Consensus 460 -----------~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~ 491 (635)
.+.++|+|+.+.|||+++++.+-|+||+.+..
T Consensus 181 ~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 181 KEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp HHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 11278999999999999887778999987643
No 405
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.47 E-value=5.7e-07 Score=91.74 Aligned_cols=132 Identities=14% Similarity=0.177 Sum_probs=97.3
Q ss_pred ccccccCceEEEEEEecCCCeEEEEEeecccCChHHHHHHHHHHHhhcC--C-CceeceeEEEEeCCeeEEEEEeccCCC
Q 006677 344 EVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQ--H-PNVVPLRAYYYSKDEKLLVYDYFASGS 420 (635)
Q Consensus 344 ~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~--h-~niv~l~~~~~~~~~~~lv~e~~~~g~ 420 (635)
+.++.|....||+. +..+++|+..... ....+.+|.+++..+.+ . ..+.+++++ +..++||||++|.+
T Consensus 43 ~~l~~G~~n~vy~v----g~~~vlR~~~~~~-~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme~i~G~~ 113 (320)
T 3r70_A 43 RYLSSGDDSDTFLC----NEQYVVKVPKRDS-VRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMKYIKGER 113 (320)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEESSHH-HHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEECCCCBC
T ss_pred EeCCCCCCceEEEE----CCEEEEEeCCcHH-HHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEeecCCcc
Confidence 56889999999998 6678888764322 23568899999998843 1 224445544 56789999999988
Q ss_pred hhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCC----------------------------------------
Q 006677 421 LSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGG---------------------------------------- 460 (635)
Q Consensus 421 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~---------------------------------------- 460 (635)
+..... ..++..++..++.+++..++.||+...
T Consensus 114 l~~~~~-------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (320)
T 3r70_A 114 ITYEQY-------HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDEML 186 (320)
T ss_dssp CCHHHH-------TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHHHH
T ss_pred cccccc-------ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccccccch
Confidence 864321 125677778888888888888886432
Q ss_pred --------------------CCceecCCCCCCeEEcCCCCeEEeecCCCCC
Q 006677 461 --------------------PKFTHGNIKASNVLINQDLDGCISDFGLTPL 491 (635)
Q Consensus 461 --------------------~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~ 491 (635)
+.++|+|+++.||+++++..+.|+||+.+..
T Consensus 187 ~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~ 237 (320)
T 3r70_A 187 EHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNV 237 (320)
T ss_dssp HHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCccccc
Confidence 1249999999999999976679999998754
No 406
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.45 E-value=1.3e-08 Score=113.33 Aligned_cols=143 Identities=15% Similarity=0.072 Sum_probs=78.9
Q ss_pred eEEEEEeCCCCccCc----CCcccccCCCCCcEEEeecCCCCC----CCCCCCCCCCcccEEeeccCccCCcCCC-----
Q 006677 70 RVFGLRLPGIGLVGP----IPNNTLGKLDALEVLSLRSNVLTG----GLPSEITSLPSLRYLYLQHNNFSGKIPS----- 136 (635)
Q Consensus 70 ~v~~l~l~~~~l~g~----l~~~~l~~l~~L~~L~L~~n~l~g----~~p~~~~~l~~L~~L~l~~N~l~g~~p~----- 136 (635)
+++.|+|++|.+++. ++. .+.++++|++|+|++|.+++ .++..+.++++|+.|+|++|.+.+ +|.
T Consensus 165 ~L~~L~L~~~~~~~~~~~~l~~-~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~ 242 (592)
T 3ogk_B 165 KIKTLLMEESSFSEKDGKWLHE-LAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAA 242 (592)
T ss_dssp TCSEEECTTCEEECCCSHHHHH-HHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHC
T ss_pred CCCEEECccccccCcchhHHHH-HHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhh
Confidence 455566666655443 222 34455566666666666552 233334455566666666655543 222
Q ss_pred ----------------------Ccc--CCcceeeccCccCcccCCchhhccccCCcEEcCCCcccccCCC---CCCCCCc
Q 006677 137 ----------------------SFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPN---FDIPKLR 189 (635)
Q Consensus 137 ----------------------~~~--~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~---~~l~~L~ 189 (635)
.+. ++|+.|+++++.. +.+|..+..+++|++|+|++|.+++.... ..+++|+
T Consensus 243 ~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~-~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~ 321 (592)
T 3ogk_B 243 ANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGP-NEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLE 321 (592)
T ss_dssp TTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCT-TTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCC
T ss_pred hHHHhhcccccccccchHHHHHHhhccccccccCccccch-hHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCC
Confidence 121 4566666666433 36677777888888888888887654332 3678888
Q ss_pred EEEeecccCcCCCCcccCCCCCCCcc
Q 006677 190 HLNLSYNGLKGSIPSSLQKFPNSSFV 215 (635)
Q Consensus 190 ~l~l~~N~l~g~~p~~~~~l~~l~~~ 215 (635)
.|+|++|-..+.++..+..+++|+.+
T Consensus 322 ~L~L~~~~~~~~l~~~~~~~~~L~~L 347 (592)
T 3ogk_B 322 VLETRNVIGDRGLEVLAQYCKQLKRL 347 (592)
T ss_dssp EEEEEGGGHHHHHHHHHHHCTTCCEE
T ss_pred EEeccCccCHHHHHHHHHhCCCCCEE
Confidence 88888443333333333444555444
No 407
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.31 E-value=1.4e-08 Score=112.94 Aligned_cols=121 Identities=21% Similarity=0.253 Sum_probs=55.4
Q ss_pred CCCCCcEEEeecCCCCCCCCCCCC-CCCcccEEeeccC-ccCCc-CCCCc--cCCcceeeccCccCcccCCchhh----c
Q 006677 92 KLDALEVLSLRSNVLTGGLPSEIT-SLPSLRYLYLQHN-NFSGK-IPSSF--SPQLVVLDLSFNSFTGNIPQSIQ----N 162 (635)
Q Consensus 92 ~l~~L~~L~L~~n~l~g~~p~~~~-~l~~L~~L~l~~N-~l~g~-~p~~~--~~~L~~L~ls~N~l~g~~p~~~~----~ 162 (635)
.+++|++|+|++|.+++..+..+. ++++|+.|+|++| .++.. ++..+ .++|++|+|++|.+++..+..+. .
T Consensus 103 ~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~ 182 (594)
T 2p1m_B 103 SYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDT 182 (594)
T ss_dssp HCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTT
T ss_pred hCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhc
Confidence 445555555555555544444443 4555555555555 33221 11111 14555555555555543333332 3
Q ss_pred cccCCcEEcCCCcccccCCCC-------CCCCCcEEEeecc-cCcCCCCcccCCCCCCCcc
Q 006677 163 LTQLTGLSLQSNNLSGSIPNF-------DIPKLRHLNLSYN-GLKGSIPSSLQKFPNSSFV 215 (635)
Q Consensus 163 l~~L~~L~l~~N~l~~~~p~~-------~l~~L~~l~l~~N-~l~g~~p~~~~~l~~l~~~ 215 (635)
+++|+.|+|++|. +.++.. .+++|+.|+|++| .+++ +|..+.++++|..+
T Consensus 183 ~~~L~~L~l~~~~--~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~-l~~~~~~~~~L~~L 240 (594)
T 2p1m_B 183 YTSLVSLNISCLA--SEVSFSALERLVTRCPNLKSLKLNRAVPLEK-LATLLQRAPQLEEL 240 (594)
T ss_dssp CCCCCEEECTTCC--SCCCHHHHHHHHHHCTTCCEEECCTTSCHHH-HHHHHHHCTTCSEE
T ss_pred CCcCcEEEecccC--CcCCHHHHHHHHHhCCCCcEEecCCCCcHHH-HHHHHhcCCcceEc
Confidence 4455555555554 111110 2455555555555 2222 44444444444433
No 408
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.31 E-value=4e-06 Score=84.85 Aligned_cols=136 Identities=18% Similarity=0.208 Sum_probs=94.1
Q ss_pred ccccccCceEEEEEEecCCCeEEEEEeecccCChHHHHHHHHHHHhhcCC-C-ceeceeEEEE-eCCeeEEEEEeccCCC
Q 006677 344 EVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQH-P-NVVPLRAYYY-SKDEKLLVYDYFASGS 420 (635)
Q Consensus 344 ~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h-~-niv~l~~~~~-~~~~~~lv~e~~~~g~ 420 (635)
+.++.|....||+. +..+++|+-.. ......+.+|.+++..+.+| + .+.+.+.++. ..+..++||||++|..
T Consensus 25 ~~l~~G~~n~v~~v----g~~~VlR~~~~-~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~~ 99 (306)
T 3tdw_A 25 ESLGEGFRNYAILV----NGDWVFRFPKS-QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQI 99 (306)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEESS-HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSEE
T ss_pred eecCCCcceeEEEE----CCEEEEEecCC-chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCeE
Confidence 45788888899988 56788887432 12245788999999999544 2 3566666664 3445789999999988
Q ss_pred hhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC-----------------------------------------
Q 006677 421 LSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMG----------------------------------------- 459 (635)
Q Consensus 421 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~----------------------------------------- 459 (635)
+.+..-. .++......++.++++.|+.||+..
T Consensus 100 l~~~~~~-------~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l 172 (306)
T 3tdw_A 100 LGEDGMA-------VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYL 172 (306)
T ss_dssp CHHHHHT-------TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHH
T ss_pred Cchhhhh-------hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHH
Confidence 8663211 1445555666666666666666432
Q ss_pred ----------------CCCceecCCCCCCeEEcC---CCC-eEEeecCCCCC
Q 006677 460 ----------------GPKFTHGNIKASNVLINQ---DLD-GCISDFGLTPL 491 (635)
Q Consensus 460 ----------------~~~ivH~Dlk~~NIll~~---~~~-~ki~DfGla~~ 491 (635)
.+.++|+|+++.||++++ ++. +.|+||+.+..
T Consensus 173 ~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 173 TLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 224699999999999997 455 48999997654
No 409
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.29 E-value=1.7e-06 Score=89.52 Aligned_cols=80 Identities=14% Similarity=0.139 Sum_probs=57.2
Q ss_pred ccc-cccCceEEEEEEec-------CCCeEEEEEeeccc---C-ChHHHHHHHHHHHhhcCC--CceeceeEEEEeC---
Q 006677 344 EVL-GKGSYGTAYKAVLE-------ESTTVVVKRLKEVV---V-GKRDFEQQMEIVGRVGQH--PNVVPLRAYYYSK--- 406 (635)
Q Consensus 344 ~~l-G~G~fg~Vy~~~~~-------~~~~vavK~l~~~~---~-~~~~~~~e~~~l~~l~~h--~niv~l~~~~~~~--- 406 (635)
+.| +.|....+|+.... ++..+++|+..... . ....+.+|..++..+..+ -.+.++++++.+.
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 457 78888999998764 25678888765432 1 235688899999888655 3567788877654
Q ss_pred CeeEEEEEeccCCChhh
Q 006677 407 DEKLLVYDYFASGSLST 423 (635)
Q Consensus 407 ~~~~lv~e~~~~g~L~~ 423 (635)
...++||||++|..+.+
T Consensus 106 g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp SSCEEEEECCCCBCCCB
T ss_pred CCceEEEEecCCCChhh
Confidence 34689999999877654
No 410
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.29 E-value=4e-06 Score=83.92 Aligned_cols=74 Identities=15% Similarity=0.198 Sum_probs=58.4
Q ss_pred ccccccCceEEEEEEecCCCeEEEEEeeccc-CChHHHHHHHHHHHhhcCC--CceeceeEEEEeCCeeEEEEEeccCCC
Q 006677 344 EVLGKGSYGTAYKAVLEESTTVVVKRLKEVV-VGKRDFEQQMEIVGRVGQH--PNVVPLRAYYYSKDEKLLVYDYFASGS 420 (635)
Q Consensus 344 ~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~-~~~~~~~~e~~~l~~l~~h--~niv~l~~~~~~~~~~~lv~e~~~~g~ 420 (635)
+.|+.|.++.||++...+|+.+++|+..... .....+.+|++.++.+.++ ..+++++++. ..++||||++++.
T Consensus 21 ~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g~~ 96 (288)
T 3d1u_A 21 AERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDERP 96 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCCCC
T ss_pred eeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEecccCC
Confidence 4689999999999998889999999965432 2346789999999999432 3577777763 4689999999986
Q ss_pred h
Q 006677 421 L 421 (635)
Q Consensus 421 L 421 (635)
+
T Consensus 97 ~ 97 (288)
T 3d1u_A 97 P 97 (288)
T ss_dssp C
T ss_pred C
Confidence 5
No 411
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.28 E-value=2.4e-08 Score=111.11 Aligned_cols=107 Identities=18% Similarity=0.108 Sum_probs=62.5
Q ss_pred CCCCCcEEEeecCCCCCCCCCCCC-CCCcccEEeec--c----CccCCcCCC--C----cc--CCcceeeccCccCcccC
Q 006677 92 KLDALEVLSLRSNVLTGGLPSEIT-SLPSLRYLYLQ--H----NNFSGKIPS--S----FS--PQLVVLDLSFNSFTGNI 156 (635)
Q Consensus 92 ~l~~L~~L~L~~n~l~g~~p~~~~-~l~~L~~L~l~--~----N~l~g~~p~--~----~~--~~L~~L~ls~N~l~g~~ 156 (635)
.+++|+.|+++.|++++..+..+. ++++|+.|+|+ + |.+++ .|. . +. ++|+.|+|++ .+++..
T Consensus 370 ~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~-~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~ 447 (594)
T 2p1m_B 370 GCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTL-EPLDIGFGAIVEHCKDLRRLSLSG-LLTDKV 447 (594)
T ss_dssp HCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTC-CCTHHHHHHHHHHCTTCCEEECCS-SCCHHH
T ss_pred hchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccC-CchhhHHHHHHhhCCCccEEeecC-cccHHH
Confidence 367777777777777655444444 46777777777 3 44442 111 1 11 5677777765 555555
Q ss_pred Cchhhc-cccCCcEEcCCCcccccCCCC---CCCCCcEEEeecccCcC
Q 006677 157 PQSIQN-LTQLTGLSLQSNNLSGSIPNF---DIPKLRHLNLSYNGLKG 200 (635)
Q Consensus 157 p~~~~~-l~~L~~L~l~~N~l~~~~p~~---~l~~L~~l~l~~N~l~g 200 (635)
+..++. +++|+.|+|++|.+++..... .+++|+.|+|++|.+++
T Consensus 448 ~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~ 495 (594)
T 2p1m_B 448 FEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGD 495 (594)
T ss_dssp HHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCH
T ss_pred HHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcH
Confidence 555554 666777777777765432221 46667777777777643
No 412
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.20 E-value=6.3e-06 Score=85.45 Aligned_cols=74 Identities=8% Similarity=-0.026 Sum_probs=55.1
Q ss_pred ccccccCceEEEEEEecCCCeEEEEEeecccCChHHHHHHHHHHHhhcCC-CceeceeEEEEeC-CeeEEEEEeccCCCh
Q 006677 344 EVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQH-PNVVPLRAYYYSK-DEKLLVYDYFASGSL 421 (635)
Q Consensus 344 ~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h-~niv~l~~~~~~~-~~~~lv~e~~~~g~L 421 (635)
+.++.|....+|+... ++..+++|+... ...+..|..++..+..+ -.+.++++++... ...++||||+++..+
T Consensus 47 ~~l~gG~~n~~y~v~~-~g~~~vlK~~~~----~~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G~~l 121 (362)
T 3ovc_A 47 MQLSEGEESRAFSFDV-GGRGYVLRVNSC----ADGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQGVTL 121 (362)
T ss_dssp EEEEECSSEEEEEEEE-TTEEEEEEEESC----CHHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCSEET
T ss_pred EECCCCCcceEEEEEE-CCcEEEEEeCCc----hhhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCCCCc
Confidence 4578899999999886 477888887643 23688999999998543 2256677777654 568999999998666
Q ss_pred h
Q 006677 422 S 422 (635)
Q Consensus 422 ~ 422 (635)
.
T Consensus 122 ~ 122 (362)
T 3ovc_A 122 Q 122 (362)
T ss_dssp T
T ss_pred c
Confidence 4
No 413
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.18 E-value=6.4e-08 Score=90.38 Aligned_cols=108 Identities=15% Similarity=0.186 Sum_probs=83.2
Q ss_pred CeEEEEEeCCC-CccC----cCCcccccCCCCCcEEEeecCCCCCC----CCCCCCCCCcccEEeeccCccCCc----CC
Q 006677 69 TRVFGLRLPGI-GLVG----PIPNNTLGKLDALEVLSLRSNVLTGG----LPSEITSLPSLRYLYLQHNNFSGK----IP 135 (635)
Q Consensus 69 ~~v~~l~l~~~-~l~g----~l~~~~l~~l~~L~~L~L~~n~l~g~----~p~~~~~l~~L~~L~l~~N~l~g~----~p 135 (635)
..++.|+|++| ++.. .+.. .+...++|++|+|++|.|... +...+...++|++|+|++|.|+.. +.
T Consensus 36 ~~L~~L~L~~n~~i~~~g~~~l~~-~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~ 114 (185)
T 1io0_A 36 PDLEEVNLNNIMNIPVPTLKACAE-ALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALV 114 (185)
T ss_dssp TTCCEEECTTCTTCCHHHHHHHHH-HHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHH
T ss_pred CCCCEEEecCCCCCCHHHHHHHHH-HHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHH
Confidence 56889999999 7763 2333 577789999999999999742 344456668999999999999853 23
Q ss_pred CCcc--CCcceeec--cCccCccc----CCchhhccccCCcEEcCCCccc
Q 006677 136 SSFS--PQLVVLDL--SFNSFTGN----IPQSIQNLTQLTGLSLQSNNLS 177 (635)
Q Consensus 136 ~~~~--~~L~~L~l--s~N~l~g~----~p~~~~~l~~L~~L~l~~N~l~ 177 (635)
..+. ++|++|+| ++|.|+.. +...+...++|+.|+|++|.+.
T Consensus 115 ~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 115 EALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 3333 68999999 88999854 4455667799999999999986
No 414
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.16 E-value=4.6e-07 Score=93.78 Aligned_cols=38 Identities=16% Similarity=0.240 Sum_probs=16.1
Q ss_pred ccCCCCCcEEEeecCCCCCCCCCCCCCCCcccEEeeccCcc
Q 006677 90 LGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNF 130 (635)
Q Consensus 90 l~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~N~l 130 (635)
+..+++|+.|+|++|.-. .+|. + .+++|+.|+|..|.+
T Consensus 168 l~~~P~L~~L~L~g~~~l-~l~~-~-~~~~L~~L~L~~~~l 205 (362)
T 2ra8_A 168 LDAMPLLNNLKIKGTNNL-SIGK-K-PRPNLKSLEIISGGL 205 (362)
T ss_dssp HHTCTTCCEEEEECCBTC-BCCS-C-BCTTCSEEEEECSBC
T ss_pred HhcCCCCcEEEEeCCCCc-eecc-c-cCCCCcEEEEecCCC
Confidence 344455555555544211 1222 2 244555555544444
No 415
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=98.11 E-value=8.6e-06 Score=85.60 Aligned_cols=136 Identities=15% Similarity=0.121 Sum_probs=73.1
Q ss_pred eEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCcccEEeeccCccCCcCCCCcc-CCcceeecc
Q 006677 70 RVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS-PQLVVLDLS 148 (635)
Q Consensus 70 ~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~-~~L~~L~ls 148 (635)
+++.+.|+++ ++ .|+..+|.+ .+|+.++|.+ +++..-+..|.+|++|+.++|++|+++..-...|. .+|+.+.|.
T Consensus 136 ~L~~i~l~~~-i~-~I~~~aF~~-~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~~~~L~~l~lp 211 (401)
T 4fdw_A 136 QIAKVVLNEG-LK-SIGDMAFFN-STVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFVYAGIEEVLLP 211 (401)
T ss_dssp CCSEEECCTT-CC-EECTTTTTT-CCCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTTTCCCSEEECC
T ss_pred CccEEEeCCC-cc-EECHHhcCC-CCceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEeecccCEEEeC
Confidence 3556666554 44 566556666 3577777764 55533345667777777777777776632222332 566667666
Q ss_pred CccCcccCCchhhccccCCcEEcCCCcccccCCCC--CCCCCcEEEeecccCcCCCCcccCCCCCCC
Q 006677 149 FNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNSS 213 (635)
Q Consensus 149 ~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~ 213 (635)
+| ++..-..+|.++++|+.++|.+| ++ .++.. .-.+|+.++| .|.++..-+..|.++++|.
T Consensus 212 ~~-l~~I~~~aF~~~~~L~~l~l~~~-l~-~I~~~aF~~~~L~~i~l-p~~i~~I~~~aF~~c~~L~ 274 (401)
T 4fdw_A 212 VT-LKEIGSQAFLKTSQLKTIEIPEN-VS-TIGQEAFRESGITTVKL-PNGVTNIASRAFYYCPELA 274 (401)
T ss_dssp TT-CCEECTTTTTTCTTCCCEECCTT-CC-EECTTTTTTCCCSEEEE-ETTCCEECTTTTTTCTTCC
T ss_pred Cc-hheehhhHhhCCCCCCEEecCCC-cc-CccccccccCCccEEEe-CCCccEEChhHhhCCCCCC
Confidence 33 55444556666667777776654 22 22221 1145555555 2334322234455554444
No 416
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.08 E-value=2.5e-07 Score=95.75 Aligned_cols=127 Identities=21% Similarity=0.284 Sum_probs=81.7
Q ss_pred CeEEEEEeCCCC-ccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCC--CCCcccEEeecc--CccCCc---------C
Q 006677 69 TRVFGLRLPGIG-LVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEIT--SLPSLRYLYLQH--NNFSGK---------I 134 (635)
Q Consensus 69 ~~v~~l~l~~~~-l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~--~l~~L~~L~l~~--N~l~g~---------~ 134 (635)
.++..|+|.++. + .+++ +. +++|+.|+|..|.++...-..+. ++++|+.|+|+. |...|. +
T Consensus 172 P~L~~L~L~g~~~l--~l~~--~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l 246 (362)
T 2ra8_A 172 PLLNNLKIKGTNNL--SIGK--KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLF 246 (362)
T ss_dssp TTCCEEEEECCBTC--BCCS--CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGS
T ss_pred CCCcEEEEeCCCCc--eecc--cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHH
Confidence 467888887762 2 3443 33 78888888888877633222333 678888888863 222211 1
Q ss_pred CCCccCCcceeeccCccCcccCCchhh---ccccCCcEEcCCCccccc----CCCC--CCCCCcEEEeecccCcC
Q 006677 135 PSSFSPQLVVLDLSFNSFTGNIPQSIQ---NLTQLTGLSLQSNNLSGS----IPNF--DIPKLRHLNLSYNGLKG 200 (635)
Q Consensus 135 p~~~~~~L~~L~ls~N~l~g~~p~~~~---~l~~L~~L~l~~N~l~~~----~p~~--~l~~L~~l~l~~N~l~g 200 (635)
...-.++|++|+|++|.+++..+..+. .+++|+.|+|+.|.|++. ++.. .+++|+.|+|++|.++.
T Consensus 247 ~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d 321 (362)
T 2ra8_A 247 SKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSD 321 (362)
T ss_dssp CTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCH
T ss_pred hcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCH
Confidence 111126888888888888765544444 477888888888888753 2222 56788888888887763
No 417
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=98.07 E-value=6.6e-06 Score=86.48 Aligned_cols=122 Identities=16% Similarity=0.206 Sum_probs=73.3
Q ss_pred eEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCcccEEeeccCccCCcCCCCcc--CCcceeec
Q 006677 70 RVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDL 147 (635)
Q Consensus 70 ~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~l 147 (635)
.++.+.|++ ++. .|+...|.++.+|+.++|++|+++ .||......++|+.+.|.+| ++..-...|. ++|+.++|
T Consensus 158 ~L~~i~lp~-~l~-~I~~~aF~~c~~L~~l~l~~n~l~-~I~~~aF~~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l 233 (401)
T 4fdw_A 158 TVQEIVFPS-TLE-QLKEDIFYYCYNLKKADLSKTKIT-KLPASTFVYAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEI 233 (401)
T ss_dssp CCCEEECCT-TCC-EECSSTTTTCTTCCEEECTTSCCS-EECTTTTTTCCCSEEECCTT-CCEECTTTTTTCTTCCCEEC
T ss_pred CceEEEeCC-Ccc-EehHHHhhCcccCCeeecCCCcce-EechhhEeecccCEEEeCCc-hheehhhHhhCCCCCCEEec
Confidence 477788875 565 677778888888888888888887 55544444677777777744 5523333333 46777777
Q ss_pred cCccCcccCCchhhccccCCcEEcCCCcccccCCC-C--CCCCCcEEEeecccCc
Q 006677 148 SFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPN-F--DIPKLRHLNLSYNGLK 199 (635)
Q Consensus 148 s~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~--~l~~L~~l~l~~N~l~ 199 (635)
..| ++..-..+|.+ .+|+.+.| .|.++ .++. . .+++|+.+++.+|.+.
T Consensus 234 ~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~-~I~~~aF~~c~~L~~l~l~~~~~~ 284 (401)
T 4fdw_A 234 PEN-VSTIGQEAFRE-SGITTVKL-PNGVT-NIASRAFYYCPELAEVTTYGSTFN 284 (401)
T ss_dssp CTT-CCEECTTTTTT-CCCSEEEE-ETTCC-EECTTTTTTCTTCCEEEEESSCCC
T ss_pred CCC-ccCcccccccc-CCccEEEe-CCCcc-EEChhHhhCCCCCCEEEeCCcccc
Confidence 654 44333344544 55666666 33343 2222 1 5566666666665543
No 418
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.92 E-value=6.7e-05 Score=75.75 Aligned_cols=140 Identities=17% Similarity=0.154 Sum_probs=91.9
Q ss_pred ccccccCceEEEEEEecCCCeEEEEEeecccCChHHHHHHHHHHHhhcCC--CceeceeEEEEeCCeeEEEEEeccCCCh
Q 006677 344 EVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQH--PNVVPLRAYYYSKDEKLLVYDYFASGSL 421 (635)
Q Consensus 344 ~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h--~niv~l~~~~~~~~~~~lv~e~~~~g~L 421 (635)
+.|+.|.+..+|+.... +..+++|+.... ....+..|.+.++.+..+ ..+++.++++...+..++||||+++..+
T Consensus 42 ~~l~gG~~n~~y~v~~~-~~~~vlK~~~~~--~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~~~ 118 (312)
T 3jr1_A 42 EKLYSGEMNEIWLINDE-VQTVFVKINERS--YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKSKN 118 (312)
T ss_dssp EEECCSSSSEEEEEESS-SCEEEEEEEEGG--GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCCCC
T ss_pred EEeCCccceeeeEEEEC-CCeEEEEeCCcc--cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCCCC
Confidence 35788999999999864 678888887543 256788999999888543 6688889888888889999999998764
Q ss_pred hh-----------hccCCCC-C----------------CCCCCCHHHHH---HHHH----------------HHHHH-HH
Q 006677 422 ST-----------LLHGNRG-A----------------GRTPLDWETRV---KILL----------------GTARG-VA 453 (635)
Q Consensus 422 ~~-----------~l~~~~~-~----------------~~~~l~~~~~~---~i~~----------------~ia~~-l~ 453 (635)
.. .+|.... . ....-+|.... ++.. .+... ..
T Consensus 119 ~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~l~~ 198 (312)
T 3jr1_A 119 KQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIVAD 198 (312)
T ss_dssp CTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHHHHH
T ss_pred CchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHH
Confidence 21 2232211 0 00012454321 1111 11111 12
Q ss_pred HHHh-cCCCCceecCCCCCCeEEcCCCCeEEeecC
Q 006677 454 HIHS-MGGPKFTHGNIKASNVLINQDLDGCISDFG 487 (635)
Q Consensus 454 ~LH~-~~~~~ivH~Dlk~~NIll~~~~~~ki~DfG 487 (635)
.|.. ...+.++|+|+.+.|++++.++ +.|+||.
T Consensus 199 ~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 199 TLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 3321 2246699999999999999887 8899973
No 419
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.90 E-value=4.2e-05 Score=78.26 Aligned_cols=143 Identities=14% Similarity=0.212 Sum_probs=80.2
Q ss_pred ccccccCceEEEEEEecCCCeEEEEEeecccCChHHHHHHHHHHHhhcCC-CceeceeE------EEEeCCeeEEEEEec
Q 006677 344 EVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQH-PNVVPLRA------YYYSKDEKLLVYDYF 416 (635)
Q Consensus 344 ~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h-~niv~l~~------~~~~~~~~~lv~e~~ 416 (635)
+.|+.|..+.||+....++ .+++|+... ...+...|.+++..+.++ -.+.+++. +....+..++||+|+
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~---~~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~i 113 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHR---PEKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDWI 113 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECS---CHHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEECC
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCC---CHHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEee
Confidence 3466677889999987654 588888865 234455566666655321 12333332 123456788999999
Q ss_pred cCCChh--------------hhccCCCC----C-C----CCCCCHHHH-------------------------------H
Q 006677 417 ASGSLS--------------TLLHGNRG----A-G----RTPLDWETR-------------------------------V 442 (635)
Q Consensus 417 ~~g~L~--------------~~l~~~~~----~-~----~~~l~~~~~-------------------------------~ 442 (635)
+|..+. ..+|.... . . ...-.|... .
T Consensus 114 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 193 (346)
T 2q83_A 114 EGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEID 193 (346)
T ss_dssp CCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred cCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHH
Confidence 986542 11121100 0 0 001123211 0
Q ss_pred HHHHHHHHHHHHHHh--------c--CCCCceecCCCCCCeEEcCCCCeEEeecCCCC
Q 006677 443 KILLGTARGVAHIHS--------M--GGPKFTHGNIKASNVLINQDLDGCISDFGLTP 490 (635)
Q Consensus 443 ~i~~~ia~~l~~LH~--------~--~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~ 490 (635)
.+...+..++++|++ . ..+.++|+|+++.||+++.++.+.|+||+.+.
T Consensus 194 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 194 GFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 111123345666653 1 23459999999999999888899999998764
No 420
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.89 E-value=6.8e-05 Score=78.69 Aligned_cols=74 Identities=12% Similarity=0.194 Sum_probs=49.5
Q ss_pred ccccccCceEEEEEEec-CCCeEEEEEeeccc--------CChHHHHHHHHHHHhhcCC-Cc-eeceeEEEEeCCeeEEE
Q 006677 344 EVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVV--------VGKRDFEQQMEIVGRVGQH-PN-VVPLRAYYYSKDEKLLV 412 (635)
Q Consensus 344 ~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~--------~~~~~~~~e~~~l~~l~~h-~n-iv~l~~~~~~~~~~~lv 412 (635)
+.||.|.++.||++... +++.+++|...... .....+..|.+++..+..+ +. +.+++.+ +.+..++|
T Consensus 36 ~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~lv 113 (397)
T 2olc_A 36 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVTV 113 (397)
T ss_dssp EECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEEE
T ss_pred EECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEEE
Confidence 46899999999999754 46789999764321 1234567888888887443 33 3445543 45567899
Q ss_pred EEeccCC
Q 006677 413 YDYFASG 419 (635)
Q Consensus 413 ~e~~~~g 419 (635)
|||+++.
T Consensus 114 mE~l~g~ 120 (397)
T 2olc_A 114 MEDLSHL 120 (397)
T ss_dssp ECCCTTS
T ss_pred EEeCCCc
Confidence 9999764
No 421
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.66 E-value=0.00034 Score=69.81 Aligned_cols=74 Identities=15% Similarity=0.185 Sum_probs=54.1
Q ss_pred ccccccCceEEEEEEecCCCeEEEEEeecccC-ChHHHHHHHHHHHhhcCCC--ceeceeEEEEeCCeeEEEEEeccCCC
Q 006677 344 EVLGKGSYGTAYKAVLEESTTVVVKRLKEVVV-GKRDFEQQMEIVGRVGQHP--NVVPLRAYYYSKDEKLLVYDYFASGS 420 (635)
Q Consensus 344 ~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~-~~~~~~~e~~~l~~l~~h~--niv~l~~~~~~~~~~~lv~e~~~~g~ 420 (635)
+.+|.|..+.||+....+|+.+++|+-..... ....|+.|.+.|+.+.+.. .+.+.+++ . ..++||||++++.
T Consensus 21 ~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~--~--~~~lv~e~l~~~~ 96 (288)
T 3f7w_A 21 AERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW--D--DRTLAMEWVDERP 96 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE--E--TTEEEEECCCCCC
T ss_pred EecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEec--c--CceEEEEeecccC
Confidence 45899999999999999999999998764432 2456889999999885432 24444443 2 3478999998764
Q ss_pred h
Q 006677 421 L 421 (635)
Q Consensus 421 L 421 (635)
.
T Consensus 97 ~ 97 (288)
T 3f7w_A 97 P 97 (288)
T ss_dssp C
T ss_pred C
Confidence 3
No 422
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.54 E-value=0.00011 Score=63.85 Aligned_cols=57 Identities=19% Similarity=0.251 Sum_probs=43.9
Q ss_pred cEEeeccCccC-CcCCCCccCCcceeeccCccCcccCCchhhccccCCcEEcCCCccc
Q 006677 121 RYLYLQHNNFS-GKIPSSFSPQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLS 177 (635)
Q Consensus 121 ~~L~l~~N~l~-g~~p~~~~~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~ 177 (635)
..++.+++.|+ ..+|..+.++|++|+|++|+|+...+..|..+++|+.|+|++|.+.
T Consensus 11 ~~v~Cs~~~L~~~~vP~~lp~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAFPVDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TEEECCSSCCCTTTSCSCCCTTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CEEEeCCCCCccccCCCCCCcCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 36777777776 4677777778888888888888655566788888888888888764
No 423
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.52 E-value=0.00042 Score=73.17 Aligned_cols=73 Identities=12% Similarity=0.084 Sum_probs=45.8
Q ss_pred CCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCCCCC---CC--CCcccCcccccCCC---CCCccchhhHHHHHHHHH
Q 006677 461 PKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATP---SR--SAGYRAPEVIETRK---HSHKSDVYSFGVLLLEML 532 (635)
Q Consensus 461 ~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~~~~---~~--~~~y~aPE~~~~~~---~~~k~Dvws~Gvvl~el~ 532 (635)
+.++|+|+++.|||+++++ ++|+||+.+......... .. ...|.+|+...... .....++......+|+.+
T Consensus 232 ~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 310 (420)
T 2pyw_A 232 QALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWNLF 310 (420)
T ss_dssp CEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHHHH
T ss_pred CeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHHHH
Confidence 4599999999999999876 999999987653211000 00 12256665543211 112345567788888887
Q ss_pred hC
Q 006677 533 TG 534 (635)
Q Consensus 533 tg 534 (635)
++
T Consensus 311 ~~ 312 (420)
T 2pyw_A 311 NK 312 (420)
T ss_dssp HH
T ss_pred HH
Confidence 75
No 424
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.48 E-value=0.00087 Score=68.01 Aligned_cols=144 Identities=15% Similarity=0.106 Sum_probs=83.3
Q ss_pred cccccCceEEEEEEecCCCeEEEEEeecccCChHHHHHHHHHHHhhcCCC-ceeceeEE-----EEeCCeeEEEEEeccC
Q 006677 345 VLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHP-NVVPLRAY-----YYSKDEKLLVYDYFAS 418 (635)
Q Consensus 345 ~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~-niv~l~~~-----~~~~~~~~lv~e~~~~ 418 (635)
.++ |....||+....+|+.+++|+..........+..|..++..+..+. .+++++.. ....+..+++|+|++|
T Consensus 33 ~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i~G 111 (328)
T 1zyl_A 33 PLN-SYENRVYQFQDEDRRRFVVKFYRPERWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGG 111 (328)
T ss_dssp EEC-CSSSEEEEECCTTCCCEEEEEECTTTSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCC
T ss_pred eec-CcccceEEEEcCCCCEEEEEEcCCCCCCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEecCC
Confidence 355 7778999988777778999998754445667788888888775332 24444432 1234556789999987
Q ss_pred CChhh--------------hccCC----CCCCCCCCCHHHH----HHH---------------HHHHHHHHHHHHhc---
Q 006677 419 GSLST--------------LLHGN----RGAGRTPLDWETR----VKI---------------LLGTARGVAHIHSM--- 458 (635)
Q Consensus 419 g~L~~--------------~l~~~----~~~~~~~l~~~~~----~~i---------------~~~ia~~l~~LH~~--- 458 (635)
..+.. .+|.. ........++... ..+ ...+...++.+...
T Consensus 112 ~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 191 (328)
T 1zyl_A 112 RQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWRE 191 (328)
T ss_dssp EECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCCS
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 54321 01110 0000111222211 001 01111223333221
Q ss_pred -CCCCceecCCCCCCeEEcCCCCeEEeecCCCCC
Q 006677 459 -GGPKFTHGNIKASNVLINQDLDGCISDFGLTPL 491 (635)
Q Consensus 459 -~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~ 491 (635)
..+.++|+|+++.||+++ + .+.|+||+.+..
T Consensus 192 ~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 192 DFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp CSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred cCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 223479999999999999 4 899999987643
No 425
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.45 E-value=0.00062 Score=68.34 Aligned_cols=71 Identities=6% Similarity=-0.011 Sum_probs=44.7
Q ss_pred ccccccCceEEEEEEecCCCeEEEEEeecccCChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEec-cCCCh
Q 006677 344 EVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYF-ASGSL 421 (635)
Q Consensus 344 ~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~-~~g~L 421 (635)
+.|+.|....+|+. ..+++|+........-+..+|..++..+..+.-..+++++ +.+.-++|+||+ ++.++
T Consensus 24 ~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~g~~l 95 (301)
T 3dxq_A 24 LERLGGLTNLVFRA-----GDLCLRIPGKGTEEYINRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAGAQTM 95 (301)
T ss_dssp EEEESCSSEEEEEE-----TTEEEEEECC----CCCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTTCEEC
T ss_pred eEcCCcccccccee-----eeEEEECCCCCccceeCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCCCccC
Confidence 46888999999999 5688888764322222346688777777544333455544 344467899999 55444
No 426
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.33 E-value=4.3e-05 Score=69.70 Aligned_cols=81 Identities=7% Similarity=0.055 Sum_probs=47.6
Q ss_pred CCCcEEEeecCCCCCCCCCCCCCCCcccEEeeccCc-cCCcCCCCc------cCCcceeeccCcc-CcccCCchhhcccc
Q 006677 94 DALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNN-FSGKIPSSF------SPQLVVLDLSFNS-FTGNIPQSIQNLTQ 165 (635)
Q Consensus 94 ~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~N~-l~g~~p~~~------~~~L~~L~ls~N~-l~g~~p~~~~~l~~ 165 (635)
-+|+.|||+++.++..=-..+.++++|+.|+|+++. ++..-=..+ .++|++|+|++|. ++..--..+.++++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 367888888877764322346777888888888774 442111111 1257777777763 65433344556666
Q ss_pred CCcEEcCCC
Q 006677 166 LTGLSLQSN 174 (635)
Q Consensus 166 L~~L~l~~N 174 (635)
|+.|+|+++
T Consensus 141 L~~L~L~~c 149 (176)
T 3e4g_A 141 LKYLFLSDL 149 (176)
T ss_dssp CCEEEEESC
T ss_pred CCEEECCCC
Confidence 666666655
No 427
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.25 E-value=0.002 Score=65.04 Aligned_cols=145 Identities=10% Similarity=0.096 Sum_probs=80.1
Q ss_pred ccccccCceEEEEEEecCCCeEEEEEeecccCChHHHHHHHHHHHhhcCCC-ceeceeEE------EEeCCeeEEEEEec
Q 006677 344 EVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHP-NVVPLRAY------YYSKDEKLLVYDYF 416 (635)
Q Consensus 344 ~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~-niv~l~~~------~~~~~~~~lv~e~~ 416 (635)
+.|+.|....+|+....++ .+++|+.... ....++..|..++..+..+. .+.+++.. ....+..+++++|+
T Consensus 28 ~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~-~~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~~~l 105 (322)
T 2ppq_A 28 KGIAEGVENSNFLLHTTKD-PLILTLYEKR-VEKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALISFL 105 (322)
T ss_dssp EEECC---EEEEEEEESSC-CEEEEEECC----CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEECC
T ss_pred eccCCCcccceEEEEeCCc-cEEEEEeCCC-CCHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEEEEeC
Confidence 3467788889999987655 6788887652 23356677888887775431 12333321 12345678999999
Q ss_pred cCCChhh--------------hccCCC-C--CCC-CC---CCHHHHHH------------HHHHHHHHHHHHHhc----C
Q 006677 417 ASGSLST--------------LLHGNR-G--AGR-TP---LDWETRVK------------ILLGTARGVAHIHSM----G 459 (635)
Q Consensus 417 ~~g~L~~--------------~l~~~~-~--~~~-~~---l~~~~~~~------------i~~~ia~~l~~LH~~----~ 459 (635)
+|..+.. .+|... . ... .. ..|..... +...+...++++++. .
T Consensus 106 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~~~~~ 185 (322)
T 2ppq_A 106 EGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWPKDL 185 (322)
T ss_dssp CCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHCCCSS
T ss_pred CCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCcccC
Confidence 8865421 112110 0 000 00 12322110 011134455555532 1
Q ss_pred CCCceecCCCCCCeEEcCCCCeEEeecCCCC
Q 006677 460 GPKFTHGNIKASNVLINQDLDGCISDFGLTP 490 (635)
Q Consensus 460 ~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~ 490 (635)
.+.++|+|+.+.||+++++..+.|+||+.+.
T Consensus 186 ~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 186 PAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp CEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred CcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 2348999999999999987666899998764
No 428
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=97.24 E-value=0.0011 Score=68.68 Aligned_cols=142 Identities=15% Similarity=0.214 Sum_probs=83.6
Q ss_pred cccccCceEEEEEEecC--------CCeEEEEEeecccCChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEec
Q 006677 345 VLGKGSYGTAYKAVLEE--------STTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYF 416 (635)
Q Consensus 345 ~lG~G~fg~Vy~~~~~~--------~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~ 416 (635)
.|..|....+|+....+ ++.+++|+............+|..+++.+..+.-..++++++.+ .+||||+
T Consensus 57 ~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e~i 132 (379)
T 3feg_A 57 PVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAILQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQYI 132 (379)
T ss_dssp EC-----CCEEEEECCTTSCCCSSCCSEEEEEECC---CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEECC
T ss_pred EcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCccchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEEEe
Confidence 46667778899988642 46788888644333456677899999888666555667766532 3999999
Q ss_pred cCCChhhh-----------------ccCCCC-CCCCCC-CHHHHHHHHHHHHH-------------------HHHHH---
Q 006677 417 ASGSLSTL-----------------LHGNRG-AGRTPL-DWETRVKILLGTAR-------------------GVAHI--- 455 (635)
Q Consensus 417 ~~g~L~~~-----------------l~~~~~-~~~~~l-~~~~~~~i~~~ia~-------------------~l~~L--- 455 (635)
+|..|..- +|...- ..+.+. -|.++.++..++.. .+..|
T Consensus 133 ~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~ 212 (379)
T 3feg_A 133 PSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLRKL 212 (379)
T ss_dssp SEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHHHH
T ss_pred cCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHHHH
Confidence 98655311 121111 111111 24444544443321 23333
Q ss_pred -HhcC-CCCceecCCCCCCeEEcCC----CCeEEeecCCCC
Q 006677 456 -HSMG-GPKFTHGNIKASNVLINQD----LDGCISDFGLTP 490 (635)
Q Consensus 456 -H~~~-~~~ivH~Dlk~~NIll~~~----~~~ki~DfGla~ 490 (635)
.... ...++|+|+.+.||+++++ +.+.++||..+.
T Consensus 213 L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~ 253 (379)
T 3feg_A 213 LESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS 253 (379)
T ss_dssp HHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred HhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence 2222 2248999999999999877 789999998764
No 429
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=97.16 E-value=0.00079 Score=71.22 Aligned_cols=73 Identities=12% Similarity=0.102 Sum_probs=50.2
Q ss_pred ccccccCceEEEEEEecC--------CCeEEEEEeecccCChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEe
Q 006677 344 EVLGKGSYGTAYKAVLEE--------STTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDY 415 (635)
Q Consensus 344 ~~lG~G~fg~Vy~~~~~~--------~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~ 415 (635)
+.|+.|....+|++...+ +..+++|+.... .....+.+|..++..+..+.-..++++.+. + .+|+||
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~-~~~~~li~E~~~l~~L~~~g~~P~l~~~~~--~--g~v~e~ 153 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP-ETESHLVAESVIFTLLSERHLGPKLYGIFS--G--GRLEEY 153 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC-CCHHHHHHHHHHHHHHHHTTSSSCEEEEET--T--EEEECC
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC-CcHHHHHHHHHHHHHHHhCCCCCcEEEEeC--C--CEEEEE
Confidence 457778889999998753 467888887432 122566689888888865554566776543 2 389999
Q ss_pred ccCCCh
Q 006677 416 FASGSL 421 (635)
Q Consensus 416 ~~~g~L 421 (635)
+++-.+
T Consensus 154 l~G~~l 159 (429)
T 1nw1_A 154 IPSRPL 159 (429)
T ss_dssp CCEEEC
T ss_pred eCCccc
Confidence 986444
No 430
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=97.16 E-value=0.0017 Score=69.02 Aligned_cols=74 Identities=7% Similarity=0.059 Sum_probs=48.2
Q ss_pred ccccccCceEEEEEEecC-CCeEEEEEeecccCChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEeccCCCh
Q 006677 344 EVLGKGSYGTAYKAVLEE-STTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSL 421 (635)
Q Consensus 344 ~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 421 (635)
+.|+.|-...+|+....+ +..+++|+........-+..+|..++..+..+.-..++++.+ .+ .+||||+++-.|
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~idR~~E~~vl~~L~~~gl~P~ll~~~--~~--G~v~e~I~G~~l 188 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEIINREREKKISCILYNKNIAKKIYVFF--TN--GRIEEFMDGYAL 188 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-CCSCSCHHHHHHHHHHHTTSSSBCCEEEEE--TT--EEEEECCCSEEC
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCChhhhcCHHHHHHHHHHHHhcCCCCCEEEEe--CC--eEEEEeeCCccC
Confidence 457778889999998765 467888876432211223368888999886555456777766 22 359999987544
No 431
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.14 E-value=0.001 Score=67.73 Aligned_cols=143 Identities=15% Similarity=0.104 Sum_probs=72.7
Q ss_pred cccccCceE-EEEEEecCCCeEEEEEeecccCChHHHHHHHHHHHhhcCCC-ceeceeEEEEeCCeeEEEEEeccCCChh
Q 006677 345 VLGKGSYGT-AYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHP-NVVPLRAYYYSKDEKLLVYDYFASGSLS 422 (635)
Q Consensus 345 ~lG~G~fg~-Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~-niv~l~~~~~~~~~~~lv~e~~~~g~L~ 422 (635)
.|+.|+... +|+....++..+++|...... ..++..|+.++..+..+. .+.+++.+. .+.-+++||++.+..+.
T Consensus 25 ~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~--~~~~~~e~~~l~~L~~~g~~vP~v~~~d--~~~g~ll~e~l~~~~l~ 100 (333)
T 3csv_A 25 PLAGDASSRRYQRLRSPTGAKAVLMDWSPEE--GGDTQPFVDLAQYLRNLDISAPEIYAEE--HARGLLLIEDLGDALFT 100 (333)
T ss_dssp C--------CCEEEECTTCCEEEEEECCTTT--TCCSHHHHHHHHHHHHTTCBCCCEEEEE--TTTTEEEECCCCSCBHH
T ss_pred ECCCCCCCceEEEEEcCCCCeEEEEECCCCC--CccccHHHHHHHHHHhCCCCCCceeeec--CCCCEEEEeeCCCcchH
Confidence 455554444 667765446677776544321 144566777777775442 355566653 23337899999776665
Q ss_pred hhccCC---------------------CCCCCCCCCHHHHH-------H-------------HHHHHHHHHHHHH---hc
Q 006677 423 TLLHGN---------------------RGAGRTPLDWETRV-------K-------------ILLGTARGVAHIH---SM 458 (635)
Q Consensus 423 ~~l~~~---------------------~~~~~~~l~~~~~~-------~-------------i~~~ia~~l~~LH---~~ 458 (635)
+++... .......++..... . ....+...++.+. ..
T Consensus 101 ~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~~~ 180 (333)
T 3csv_A 101 EVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQLE 180 (333)
T ss_dssp HHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHHCC
T ss_pred HHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhccc
Confidence 443211 00001112211100 0 0001112222331 11
Q ss_pred CCCCceecCCCCCCeEEcCC----CCeEEeecCCCCC
Q 006677 459 GGPKFTHGNIKASNVLINQD----LDGCISDFGLTPL 491 (635)
Q Consensus 459 ~~~~ivH~Dlk~~NIll~~~----~~~ki~DfGla~~ 491 (635)
..+.++|+|+.+.|||++.+ +.+.|+||+.+..
T Consensus 181 ~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 181 GDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp SCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred CCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 22358999999999999875 6789999998754
No 432
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.94 E-value=6.5e-05 Score=69.84 Aligned_cols=110 Identities=13% Similarity=0.156 Sum_probs=64.8
Q ss_pred cccCCCCCcEEEeecC-CCCCC----CCCCCCCCCcccEEeeccCccCCcCCCCcc------CCcceeeccCccCccc--
Q 006677 89 TLGKLDALEVLSLRSN-VLTGG----LPSEITSLPSLRYLYLQHNNFSGKIPSSFS------PQLVVLDLSFNSFTGN-- 155 (635)
Q Consensus 89 ~l~~l~~L~~L~L~~n-~l~g~----~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~------~~L~~L~ls~N~l~g~-- 155 (635)
.+.+-+.|+.|+|++| +|... +-..+..=+.|+.|+|++|.+...--..+. +.|++|+|++|+|+..
T Consensus 36 ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga 115 (197)
T 1pgv_A 36 LREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELL 115 (197)
T ss_dssp HHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHH
T ss_pred HHhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHH
Confidence 3455677888888875 66521 233445557788888888888743333333 5688888888888743
Q ss_pred --CCchhhccccCCcEEcCCCc---cccc----CCCC--CCCCCcEEEeecccC
Q 006677 156 --IPQSIQNLTQLTGLSLQSNN---LSGS----IPNF--DIPKLRHLNLSYNGL 198 (635)
Q Consensus 156 --~p~~~~~l~~L~~L~l~~N~---l~~~----~p~~--~l~~L~~l~l~~N~l 198 (635)
+-..+..-+.|+.|+|++|. +... +... .-+.|+.|+|+.|.+
T Consensus 116 ~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 116 ARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASM 169 (197)
T ss_dssp HHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCH
T ss_pred HHHHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCc
Confidence 22344445567888887553 2211 1000 234577777766543
No 433
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.93 E-value=0.0019 Score=66.82 Aligned_cols=74 Identities=12% Similarity=0.112 Sum_probs=44.7
Q ss_pred ccccccCceEEEEEEecC---------CCeEEEEEeecccCChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEE
Q 006677 344 EVLGKGSYGTAYKAVLEE---------STTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYD 414 (635)
Q Consensus 344 ~~lG~G~fg~Vy~~~~~~---------~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e 414 (635)
+.|+.|....+|+....+ +..+++|+.........+...|.+++..+..+.-+.++++.. . -++|||
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~~v~e 114 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDELYNTISEFEVYKTMSKYKIAPQLLNTF--N--GGRIEE 114 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGGTSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccceecHHHHHHHHHHHHhcCCCCceEEec--C--CcEEEE
Confidence 357778888999998754 267888876543211123467888888875554345666543 2 378999
Q ss_pred eccCCCh
Q 006677 415 YFASGSL 421 (635)
Q Consensus 415 ~~~~g~L 421 (635)
|++|..+
T Consensus 115 ~i~G~~l 121 (369)
T 3c5i_A 115 WLYGDPL 121 (369)
T ss_dssp CCCSEEC
T ss_pred EecCCcC
Confidence 9987543
No 434
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=96.79 E-value=0.00044 Score=62.94 Aligned_cols=80 Identities=10% Similarity=0.035 Sum_probs=56.7
Q ss_pred CcccEEeeccCccCCcCCCCcc--CCcceeeccCcc-CcccCCchhhcc----ccCCcEEcCCCc-ccc--cCCCCCCCC
Q 006677 118 PSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFNS-FTGNIPQSIQNL----TQLTGLSLQSNN-LSG--SIPNFDIPK 187 (635)
Q Consensus 118 ~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~ls~N~-l~g~~p~~~~~l----~~L~~L~l~~N~-l~~--~~p~~~l~~ 187 (635)
-+|+.|||+++.++..--..+. ++|++|+|+++. ++..--..+..+ ++|+.|+|+++. |+. ...-..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 4799999999998743222232 789999999995 775433445553 479999999874 663 111126899
Q ss_pred CcEEEeeccc
Q 006677 188 LRHLNLSYNG 197 (635)
Q Consensus 188 L~~l~l~~N~ 197 (635)
|++|+|+++.
T Consensus 141 L~~L~L~~c~ 150 (176)
T 3e4g_A 141 LKYLFLSDLP 150 (176)
T ss_dssp CCEEEEESCT
T ss_pred CCEEECCCCC
Confidence 9999999875
No 435
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.66 E-value=0.008 Score=61.26 Aligned_cols=69 Identities=16% Similarity=0.140 Sum_probs=43.9
Q ss_pred cccCceEEEEEEecCCCeEEEEEeecccCChHHHHHHHHHHHhhcCC--CceeceeEE------EEeCCeeEEEEEeccC
Q 006677 347 GKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQH--PNVVPLRAY------YYSKDEKLLVYDYFAS 418 (635)
Q Consensus 347 G~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h--~niv~l~~~------~~~~~~~~lv~e~~~~ 418 (635)
|.|....||+....++ .+++|+...... ..|+.++..+.++ +++++.+.. ....+..++||+|++|
T Consensus 32 G~g~~N~vy~v~~~~g-~~vLK~~~~~~~-----~~E~~~l~~L~~~g~~~vp~pi~~~~G~~~~~~~g~~~~l~~~i~G 105 (339)
T 3i1a_A 32 GADTNAFAYQADSESK-SYFIKLKYGYHD-----EINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYPFIHA 105 (339)
T ss_dssp TSCSSCEEEEEECSSC-EEEEEEEECSSC-----CHHHHHHHHHHHTTCCSSCCCCCCTTSCSSEECSSEEEEEEECCCC
T ss_pred cCccccceEEEEeCCC-CEEEEEecCccc-----hHHHHHHHHHHhcCCcccccceecCCCCEEEEECCEEEEEEeccCC
Confidence 4444679999987766 889998765432 3556666655332 224444432 2334667899999998
Q ss_pred CCh
Q 006677 419 GSL 421 (635)
Q Consensus 419 g~L 421 (635)
..+
T Consensus 106 ~~~ 108 (339)
T 3i1a_A 106 PNG 108 (339)
T ss_dssp CBT
T ss_pred CcC
Confidence 765
No 436
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.44 E-value=0.00021 Score=66.33 Aligned_cols=108 Identities=14% Similarity=0.217 Sum_probs=75.0
Q ss_pred CeEEEEEeCCC-CccC----cCCcccccCCCCCcEEEeecCCCCCC----CCCCCCCCCcccEEeeccCccCCcCCCCcc
Q 006677 69 TRVFGLRLPGI-GLVG----PIPNNTLGKLDALEVLSLRSNVLTGG----LPSEITSLPSLRYLYLQHNNFSGKIPSSFS 139 (635)
Q Consensus 69 ~~v~~l~l~~~-~l~g----~l~~~~l~~l~~L~~L~L~~n~l~g~----~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~ 139 (635)
..++.|+|+++ ++.. .|-. .+..=+.|+.|+|++|+|... |-..+..=+.|+.|+|++|.|...--..+.
T Consensus 41 ~~L~~L~L~~nn~igd~ga~~la~-aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala 119 (197)
T 1pgv_A 41 TDLKEVNINNMKRVSKERIRSLIE-AACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLL 119 (197)
T ss_dssp SSCCEEECTTCCSSCHHHHHHHHH-HHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHH
T ss_pred CCccEEECCCCCCCCHHHHHHHHH-HHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHH
Confidence 56888999885 5542 1233 466778999999999999732 223333457899999999999843222221
Q ss_pred ------CCcceeeccCc---cCcc----cCCchhhccccCCcEEcCCCccc
Q 006677 140 ------PQLVVLDLSFN---SFTG----NIPQSIQNLTQLTGLSLQSNNLS 177 (635)
Q Consensus 140 ------~~L~~L~ls~N---~l~g----~~p~~~~~l~~L~~L~l~~N~l~ 177 (635)
..|++|+|++| .+.. .+-..+..-+.|+.|+++.|.+.
T Consensus 120 ~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~g 170 (197)
T 1pgv_A 120 RSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASME 170 (197)
T ss_dssp HHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCHH
T ss_pred HHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCcc
Confidence 57999999876 3442 24456667788999999988764
No 437
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=96.42 E-value=0.0088 Score=62.33 Aligned_cols=56 Identities=16% Similarity=0.129 Sum_probs=28.7
Q ss_pred eEEEEEeCCCCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCcccEEeeccC
Q 006677 70 RVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHN 128 (635)
Q Consensus 70 ~v~~l~l~~~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~N 128 (635)
.+..+.++.. ++ .|....+.+...|+.+.+..|..+ .-...+.++..|+.+.+..+
T Consensus 231 ~l~~i~ip~~-~~-~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~ 286 (394)
T 4fs7_A 231 GVKNIIIPDS-FT-ELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSV 286 (394)
T ss_dssp CCCEEEECTT-CC-EECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSS
T ss_pred CCceEEECCC-ce-ecccccccccccceeEEcCCCcce-eeccccccccccceeccCce
Confidence 3455555433 22 344445666677777777665443 22344555555555544443
No 438
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.33 E-value=0.0053 Score=52.98 Aligned_cols=56 Identities=27% Similarity=0.291 Sum_probs=39.9
Q ss_pred EEEeCCCCcc-CcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCcccEEeeccCccC
Q 006677 73 GLRLPGIGLV-GPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFS 131 (635)
Q Consensus 73 ~l~l~~~~l~-g~l~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~N~l~ 131 (635)
.++.++++|+ ..+|.+ + -.+|+.|+|++|+|+..-+..|..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~-l--p~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTA-F--PVDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSC-C--CTTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCC-C--CcCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 5677778876 456652 2 246888999999998444456777888888888888765
No 439
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.22 E-value=0.032 Score=52.11 Aligned_cols=102 Identities=12% Similarity=0.066 Sum_probs=66.7
Q ss_pred ChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCCCCCCCCCCC
Q 006677 420 SLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPS 499 (635)
Q Consensus 420 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~~~~~~~~~~ 499 (635)
+|.++|... ..++++++++.++.|.+.+|.-+-.... + ..+=+.|..|++..+|.+...+ +.+. .
T Consensus 34 SL~eIL~~~----~~PlsEEqaWALc~Qc~~~L~~~~~~~~-~-~~~i~~~~~i~l~~dG~V~f~~-~~s~--------~ 98 (229)
T 2yle_A 34 SLEEILRLY----NQPINEEQAWAVCYQCCGSLRAAARRRQ-P-RHRVRSAAQIRVWRDGAVTLAP-AADD--------A 98 (229)
T ss_dssp EHHHHHHHH----TSCCCHHHHHHHHHHHHHHHHHHHHTTC-C-CCCCCSGGGEEEETTSCEEECC-C------------
T ss_pred cHHHHHHHc----CCCcCHHHHHHHHHHHHHHHHhhhhccc-C-CceecCCcceEEecCCceeccc-cccc--------c
Confidence 788888753 3569999999999999998877632111 1 1233446899999999998764 1111 1
Q ss_pred CCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCC
Q 006677 500 RSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAP 537 (635)
Q Consensus 500 ~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p 537 (635)
....+.|||... ...+.+.=|||+|+++|..+--..|
T Consensus 99 ~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 99 GEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp --------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred cccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 223467888764 3456788999999999999875554
No 440
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=96.19 E-value=0.0065 Score=63.78 Aligned_cols=74 Identities=7% Similarity=0.075 Sum_probs=49.1
Q ss_pred ccccccCceEEEEEEecC--------CCeEEEEEeecccCChHHHHHHHHHHHhhcCCCceeceeEEEEeCCeeEEEEEe
Q 006677 344 EVLGKGSYGTAYKAVLEE--------STTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDY 415 (635)
Q Consensus 344 ~~lG~G~fg~Vy~~~~~~--------~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~ 415 (635)
+.+..|-...+|+....+ +..+++++........-+..+|..++..+..+.-..++++.+ . -++||||
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~~idR~~E~~~l~~L~~~gi~P~l~~~~--~--~~~I~ef 151 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGKFYDSKVELDVFRYLSNINIAPNIIADF--P--EGRIEEF 151 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-CCCCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEEEC
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcchhcCHHHHHHHHHHHHhcCCCCCEEEEc--C--CCEEEEE
Confidence 346667778999998763 577888886443222234567888888886555456666533 2 3789999
Q ss_pred ccCCCh
Q 006677 416 FASGSL 421 (635)
Q Consensus 416 ~~~g~L 421 (635)
++|..|
T Consensus 152 I~G~~l 157 (424)
T 3mes_A 152 IDGEPL 157 (424)
T ss_dssp CCSEEC
T ss_pred eCCccC
Confidence 998654
No 441
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=96.15 E-value=0.0078 Score=62.74 Aligned_cols=110 Identities=15% Similarity=0.277 Sum_probs=77.8
Q ss_pred cCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCcccEEeeccCccCCcCCC-Ccc--CCcceeeccCccCcccCCchh
Q 006677 84 PIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPS-SFS--PQLVVLDLSFNSFTGNIPQSI 160 (635)
Q Consensus 84 ~l~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~-~~~--~~L~~L~ls~N~l~g~~p~~~ 160 (635)
.+....|.+..+|+.+.+.++..+ .-...|.++++|+.+.+. +.++ .|+. .|. .+|+.++|..| ++..-..+|
T Consensus 255 ~i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~-~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF 330 (394)
T 4gt6_A 255 RIETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRIT-ELPESVFAGCISLKSIDIPEG-ITQILDDAF 330 (394)
T ss_dssp EECTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCC-EECTTTTTTCTTCCEEECCTT-CCEECTTTT
T ss_pred EcccceeeecccccEEecccccce-ecCcccccccccccccCC-Cccc-ccCceeecCCCCcCEEEeCCc-ccEehHhHh
Confidence 344457888889999988766544 334678888999999886 4455 3443 343 68999998765 664556788
Q ss_pred hccccCCcEEcCCCcccccCCCC---CCCCCcEEEeecccCc
Q 006677 161 QNLTQLTGLSLQSNNLSGSIPNF---DIPKLRHLNLSYNGLK 199 (635)
Q Consensus 161 ~~l~~L~~L~l~~N~l~~~~p~~---~l~~L~~l~l~~N~l~ 199 (635)
.+|.+|+.+.|..+ ++ .|... ++.+|+.+++.+|...
T Consensus 331 ~~C~~L~~i~ip~s-v~-~I~~~aF~~C~~L~~i~~~~~~~~ 370 (394)
T 4gt6_A 331 AGCEQLERIAIPSS-VT-KIPESAFSNCTALNNIEYSGSRSQ 370 (394)
T ss_dssp TTCTTCCEEEECTT-CC-BCCGGGGTTCTTCCEEEESSCHHH
T ss_pred hCCCCCCEEEECcc-cC-EEhHhHhhCCCCCCEEEECCceee
Confidence 89999999998655 54 34432 7888999999887543
No 442
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=96.06 E-value=0.011 Score=61.47 Aligned_cols=100 Identities=12% Similarity=0.145 Sum_probs=64.9
Q ss_pred CCCCCCCCcccEEeeccCccCCcCCCCcc--CCcceeeccCccCcccCCchhhccccCCcEEcCCCcccccCCCC---CC
Q 006677 111 PSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF---DI 185 (635)
Q Consensus 111 p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~---~l 185 (635)
...|.++++|+.+.+.++..+ .-...|. ..|+.+.+. +.++..-..+|.++.+|+.++|..| ++ .|... ++
T Consensus 258 ~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF~~C 333 (394)
T 4gt6_A 258 THAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-IT-QILDDAFAGC 333 (394)
T ss_dssp TTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTC
T ss_pred cceeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-cc-EehHhHhhCC
Confidence 356788888888888765443 2223333 678888885 4566455567888888888888765 44 33332 67
Q ss_pred CCCcEEEeecccCcCCCCcccCCCCCCCcc
Q 006677 186 PKLRHLNLSYNGLKGSIPSSLQKFPNSSFV 215 (635)
Q Consensus 186 ~~L~~l~l~~N~l~g~~p~~~~~l~~l~~~ 215 (635)
.+|+.+.|..+ ++..-...|.++++|+.+
T Consensus 334 ~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i 362 (394)
T 4gt6_A 334 EQLERIAIPSS-VTKIPESAFSNCTALNNI 362 (394)
T ss_dssp TTCCEEEECTT-CCBCCGGGGTTCTTCCEE
T ss_pred CCCCEEEECcc-cCEEhHhHhhCCCCCCEE
Confidence 88888888654 553334567777776544
No 443
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.91 E-value=0.018 Score=59.75 Aligned_cols=142 Identities=16% Similarity=0.216 Sum_probs=81.1
Q ss_pred cccccCceEEEEEEecC--------CCeEEEEEeecccC------------Ch-------HHHHHHHHHHHhhcCCCcee
Q 006677 345 VLGKGSYGTAYKAVLEE--------STTVVVKRLKEVVV------------GK-------RDFEQQMEIVGRVGQHPNVV 397 (635)
Q Consensus 345 ~lG~G~fg~Vy~~~~~~--------~~~vavK~l~~~~~------------~~-------~~~~~e~~~l~~l~~h~niv 397 (635)
.|..|-...+|+....+ ...|++++.-.... ++ +....|.++++.+..+--..
T Consensus 59 ~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~P 138 (401)
T 3f2s_A 59 VIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLGP 138 (401)
T ss_dssp EEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSSC
T ss_pred EcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCCC
Confidence 46567778899988754 25677777643211 11 11224788888886666677
Q ss_pred ceeEEEEeCCeeEEEEEeccCCChhh--h---------------ccCCCC-CCCCCC-CHHHHHHHHHHHH---------
Q 006677 398 PLRAYYYSKDEKLLVYDYFASGSLST--L---------------LHGNRG-AGRTPL-DWETRVKILLGTA--------- 449 (635)
Q Consensus 398 ~l~~~~~~~~~~~lv~e~~~~g~L~~--~---------------l~~~~~-~~~~~l-~~~~~~~i~~~ia--------- 449 (635)
++++++.. .+|+||+++-+|.. + +|...- ..+.+. -|....++..++.
T Consensus 139 kl~~~~~~----G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~~ 214 (401)
T 3f2s_A 139 KLYGIFPQ----GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEESR 214 (401)
T ss_dssp CEEEEETT----EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHHH
T ss_pred eEEEEeCC----CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchhh
Confidence 78777532 28999998754421 1 111110 111111 1233333333221
Q ss_pred -------------HHH----HHHHhcCC-CCceecCCCCCCeEEcCC------CCeEEeecCCCC
Q 006677 450 -------------RGV----AHIHSMGG-PKFTHGNIKASNVLINQD------LDGCISDFGLTP 490 (635)
Q Consensus 450 -------------~~l----~~LH~~~~-~~ivH~Dlk~~NIll~~~------~~~ki~DfGla~ 490 (635)
.-+ ++|...+. ..++|+|+.+.||+++++ +.+.++||..+.
T Consensus 215 ~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 215 IKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 112 22333222 247999999999999887 789999998764
No 444
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=95.82 E-value=0.022 Score=58.78 Aligned_cols=123 Identities=13% Similarity=0.085 Sum_probs=78.5
Q ss_pred ccccCCCCCcEEEeecCCCCCCCCCCCCCCCcccEEeeccCccCCcCCCCcc--CCcceeeccCccCcccCCchhhcccc
Q 006677 88 NTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQ 165 (635)
Q Consensus 88 ~~l~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~--~~L~~L~ls~N~l~g~~p~~~~~l~~ 165 (635)
..+....+|+.+.+..+ +...-...+.++.+|+.+.+..+ ++..-...|. .+|+.+.+..+ +...-...|.++++
T Consensus 211 ~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~ 287 (379)
T 4h09_A 211 YGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSN 287 (379)
T ss_dssp TTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTT
T ss_pred cccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccc
Confidence 35667778888887655 33233456778888888888765 4422223332 56888887644 55344567788888
Q ss_pred CCcEEcCCCcccccCCCC---CCCCCcEEEeecccCcCCCCcccCCCCCCCcc
Q 006677 166 LTGLSLQSNNLSGSIPNF---DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFV 215 (635)
Q Consensus 166 L~~L~l~~N~l~~~~p~~---~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~~ 215 (635)
|+.+.+.+|.++ .++.. ++.+|+.++|..| ++..-...|.++++|+.+
T Consensus 288 L~~i~l~~~~i~-~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i 338 (379)
T 4h09_A 288 LTKVVMDNSAIE-TLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTI 338 (379)
T ss_dssp CCEEEECCTTCC-EECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCC
T ss_pred cccccccccccc-eehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEE
Confidence 888888888777 33332 6788888888654 542223567776666544
No 445
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=95.66 E-value=0.038 Score=57.43 Aligned_cols=16 Identities=19% Similarity=0.222 Sum_probs=7.7
Q ss_pred CCCCCCcccEEeeccC
Q 006677 113 EITSLPSLRYLYLQHN 128 (635)
Q Consensus 113 ~~~~l~~L~~L~l~~N 128 (635)
.+.++.+|+.+.+..|
T Consensus 248 ~f~~~~~l~~~~~~~~ 263 (394)
T 4fs7_A 248 VFYGCTDLESISIQNN 263 (394)
T ss_dssp TTTTCSSCCEEEECCT
T ss_pred cccccccceeEEcCCC
Confidence 3444455555554444
No 446
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=95.26 E-value=0.071 Score=54.90 Aligned_cols=82 Identities=15% Similarity=0.210 Sum_probs=36.7
Q ss_pred cccCCCCCcEEEeecCCCCCCCCCCCCCCCcccEEeeccCccCCcCCCC-cc--CCcceeeccCccCcccCCchhhcccc
Q 006677 89 TLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSS-FS--PQLVVLDLSFNSFTGNIPQSIQNLTQ 165 (635)
Q Consensus 89 ~l~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~-~~--~~L~~L~ls~N~l~g~~p~~~~~l~~ 165 (635)
.+.+...|+.+.+..+ ++..-...+.++.+|+.+.+..+ +. .++.. |. .+|+.+++.+|.++..-..+|.+|.+
T Consensus 235 ~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~-~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~ 311 (379)
T 4h09_A 235 AFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VK-TVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVK 311 (379)
T ss_dssp TTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CS-EECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTT
T ss_pred cccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ce-eccccccccccccccccccccccceehhhhhcCCCC
Confidence 4445555555555443 33122234455555555555432 22 22221 21 44555555555554333344555555
Q ss_pred CCcEEcCC
Q 006677 166 LTGLSLQS 173 (635)
Q Consensus 166 L~~L~l~~ 173 (635)
|+.+.|.+
T Consensus 312 L~~i~lp~ 319 (379)
T 4h09_A 312 LSSVTLPT 319 (379)
T ss_dssp CCEEECCT
T ss_pred CCEEEcCc
Confidence 55555543
No 447
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=92.91 E-value=0.051 Score=36.39 Aligned_cols=30 Identities=30% Similarity=0.287 Sum_probs=16.7
Q ss_pred ceeeeeehhhHHHHHHHHHHHhhhhccccC
Q 006677 258 GAIIAIAVGGSAVLLLVALVILCYCLKKKD 287 (635)
Q Consensus 258 ~~ii~ivvg~~~~~llv~~~i~~~~~~r~~ 287 (635)
..|++.++++++++++++++++++.++|+.
T Consensus 11 ~~IA~gVVgGv~~~~ii~~~~~~~~RRr~~ 40 (44)
T 2ks1_B 11 PSIATGMVGALLLLLVVALGIGLFMRRRHI 40 (44)
T ss_dssp SSSTHHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred ceEEeehhHHHHHHHHHHHHHHHHhhhhHh
Confidence 445666666666655555555555555443
No 448
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=92.56 E-value=0.046 Score=36.51 Aligned_cols=32 Identities=28% Similarity=0.387 Sum_probs=18.2
Q ss_pred cceeeeeehhhHHHHHHHHHHHhhhhccccCC
Q 006677 257 LGAIIAIAVGGSAVLLLVALVILCYCLKKKDN 288 (635)
Q Consensus 257 ~~~ii~ivvg~~~~~llv~~~i~~~~~~r~~~ 288 (635)
...|++.+++++++++++++.+++++++|+.+
T Consensus 9 ~~aIA~gVVgGv~~v~ii~~~~~~~~RRRr~~ 40 (44)
T 2l2t_A 9 TPLIAAGVIGGLFILVIVGLTFAVYVRRKSIK 40 (44)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSS
T ss_pred cceEEEeehHHHHHHHHHHHHHHHHhhhhhhh
Confidence 34566666666666555555555555555443
No 449
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=92.47 E-value=0.035 Score=36.02 Aligned_cols=31 Identities=19% Similarity=0.163 Sum_probs=21.0
Q ss_pred ccCcceeeeeehhhHHHHHHHHHHHhhhhcc
Q 006677 254 KLGLGAIIAIAVGGSAVLLLVALVILCYCLK 284 (635)
Q Consensus 254 ~~~~~~ii~ivvg~~~~~llv~~~i~~~~~~ 284 (635)
..+.++|.+++++.++.+.+++.+++++++|
T Consensus 7 ~ls~GaIAGiVvG~v~gv~li~~l~~~~~rr 37 (38)
T 2k1k_A 7 GLTGGEIVAVIFGLLLGAALLLGILVFRSRR 37 (38)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCCceeeeehHHHHHHHHHHHHHHHHeec
Confidence 3456778888888877766666666555544
No 450
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=92.13 E-value=0.45 Score=49.39 Aligned_cols=29 Identities=21% Similarity=0.462 Sum_probs=24.2
Q ss_pred ceecCCCCCCeEE------cCCCCeEEeecCCCCC
Q 006677 463 FTHGNIKASNVLI------NQDLDGCISDFGLTPL 491 (635)
Q Consensus 463 ivH~Dlk~~NIll------~~~~~~ki~DfGla~~ 491 (635)
++|+|+.+.|||+ +++..++++||-.|..
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 5799999999999 4567799999987643
No 451
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=88.67 E-value=0.15 Score=33.91 Aligned_cols=29 Identities=17% Similarity=0.348 Sum_probs=14.1
Q ss_pred ceeeeeehhhHHHHHHHHHHHhhhhccccC
Q 006677 258 GAIIAIAVGGSAVLLLVALVILCYCLKKKD 287 (635)
Q Consensus 258 ~~ii~ivvg~~~~~llv~~~i~~~~~~r~~ 287 (635)
..|+++++| +++++++++.++++.+||+.
T Consensus 12 ~~Ia~~vVG-vll~vi~~l~~~~~~RRR~~ 40 (44)
T 2jwa_A 12 TSIISAVVG-ILLVVVLGVVFGILIKRRQQ 40 (44)
T ss_dssp HHHHHHHHH-HHHHHHHHHHHHHHHHHHCS
T ss_pred cchHHHHHH-HHHHHHHHHHHHhheehhhh
Confidence 345556666 44444444444444444443
No 452
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=79.26 E-value=3.3 Score=38.43 Aligned_cols=116 Identities=11% Similarity=0.102 Sum_probs=77.7
Q ss_pred CCCceeceeEEEEeCCeeEEEEEeccCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCC
Q 006677 392 QHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKAS 471 (635)
Q Consensus 392 ~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~ 471 (635)
.||+.+.. .+-..++...+.|+.-+.+-=...++ .++...+++++.+|+....+++. =+|--|.|+
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~ik--------~~~~~eKlr~l~ni~~l~~~~~~-----r~tf~L~P~ 108 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDNIK--------SFTKNEKLRYLLNIKNLEEVNRT-----RYTFVLAPD 108 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGGGG--------GSCHHHHHHHHHHGGGGGGGGGS-----SEECCCSGG
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcccCCHHHHH--------hcCHHHHHHHHHHHHHHHHHhcC-----ceEEEEecc
Confidence 68988877 45556666556565443222122232 27888999999999887765554 478889999
Q ss_pred CeEEcCCCCeEEeecCCCCCCCCCCCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCC
Q 006677 472 NVLINQDLDGCISDFGLTPLMNVPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQ 539 (635)
Q Consensus 472 NIll~~~~~~ki~DfGla~~~~~~~~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~ 539 (635)
|++++.++.+++.-.|+...+. |. ..++..=.-.+=+++..+++++..|.
T Consensus 109 NL~f~~~~~p~i~~RGik~~l~-------------P~-----~~~ee~fL~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 109 ELFFTRDGLPIAKTRGLQNVVD-------------PL-----PVSEAEFLTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp GEEECTTSCEEESCCEETTTBS-------------CC-----CCCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred eEEEcCCCCEEEEEccCccCCC-------------CC-----CCCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 9999999999998877644332 21 11112223356778888999988885
No 453
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=77.59 E-value=4.8 Score=37.49 Aligned_cols=115 Identities=15% Similarity=0.154 Sum_probs=75.1
Q ss_pred CCCceeceeEEEEeCCeeEEEEEeccCCChhhhccCCCCCCCCCCCHHHHHHHHHHHHHHHH-HHHhcCCCCceecCCCC
Q 006677 392 QHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVA-HIHSMGGPKFTHGNIKA 470 (635)
Q Consensus 392 ~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~-~LH~~~~~~ivH~Dlk~ 470 (635)
.||+. -..+-.+++...+.|+.-+++.=...++ .++...+++++.+|+.-.. +++. -+|--|.|
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~--------~~~~~eKlrll~nl~~L~~~~~~~-----r~tf~l~P 112 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIR--------KTTLLSRIRAAIHLVSKVKHHSAR-----RLIFIVCP 112 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHH--------TSCHHHHHHHHHHHHHHHSSCCSS-----SEECCCCG
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHH--------hcCHHHHHHHHHHHHHHHHHhhhC-----ceeEEEeC
Confidence 68887 3444456667667776554443333333 2778899999999877665 4444 67888999
Q ss_pred CCeEEcCCCCeEEeecCCCCCCCCCCCCCCCCcccCcccccCCCCCCccchhhHHHHHHHHHhCCCCCC
Q 006677 471 SNVLINQDLDGCISDFGLTPLMNVPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQ 539 (635)
Q Consensus 471 ~NIll~~~~~~ki~DfGla~~~~~~~~~~~~~~y~aPE~~~~~~~~~k~Dvws~Gvvl~el~tg~~p~~ 539 (635)
+||+++.++.++|.-.|+-..+ +|.-+. +.-=.-.+=+++..++.++..|+
T Consensus 113 ~NL~f~~~~~p~i~hRGi~~~l-------------pP~e~~-----ee~fl~qyKali~all~~K~~Fe 163 (219)
T 4ano_A 113 ENLMFNRALEPFFLHVGVKESL-------------PPDEWD-----DERLLREVKATVLALTEGEYRFD 163 (219)
T ss_dssp GGEEECTTCCEEESCCEETTTB-------------SSCSCC-----HHHHHHHHHHHHHHHTTCSSCHH
T ss_pred ceEEEeCCCcEEEEEcCCcccC-------------CCCCCC-----HHHHHHHHHHHHHHHHcCCCCHH
Confidence 9999999999999988864433 222111 11112255677777888877765
No 454
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=74.61 E-value=1.2 Score=29.23 Aligned_cols=7 Identities=14% Similarity=-0.087 Sum_probs=2.6
Q ss_pred eehhhHH
Q 006677 263 IAVGGSA 269 (635)
Q Consensus 263 ivvg~~~ 269 (635)
.++++++
T Consensus 18 ~vv~Gv~ 24 (41)
T 2k9y_A 18 GVAVGVV 24 (41)
T ss_dssp HHHHHHH
T ss_pred ehhHHHH
Confidence 3333333
No 455
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=63.80 E-value=0.81 Score=48.39 Aligned_cols=58 Identities=14% Similarity=0.141 Sum_probs=16.8
Q ss_pred ccccccCceEEEEEEecC-CCeEEE------EEeecccCC---hHHHHHHHHHHHhhcCCCceeceeEEEEe
Q 006677 344 EVLGKGSYGTAYKAVLEE-STTVVV------KRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYS 405 (635)
Q Consensus 344 ~~lG~G~fg~Vy~~~~~~-~~~vav------K~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~ 405 (635)
+.|| ||.||+|.+.. ..+||| |..+..... ...+.+|..++..+ +|+|+++.+++...
T Consensus 148 ~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~-~H~niv~~h~f~~~ 215 (463)
T 3cxl_A 148 EHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENE-QIPKYEKIHNFKVH 215 (463)
T ss_dssp TTSS---BCCC---------CCBGGGC------------------------------------CBCCCEEEE
T ss_pred ccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccc-cccccCCCcceEEe
Confidence 4566 99999999864 367888 766543322 23567777777777 89999998877643
No 456
>1iij_A ERBB-2 receptor protein-tyrosine kinase; alpha-helix-PI-bulge-alpha-helix, signaling protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=46.36 E-value=2.4 Score=26.64 Aligned_cols=23 Identities=26% Similarity=0.414 Sum_probs=8.6
Q ss_pred eeeehhhHHHHHHHHHHHhhhhcc
Q 006677 261 IAIAVGGSAVLLLVALVILCYCLK 284 (635)
Q Consensus 261 i~ivvg~~~~~llv~~~i~~~~~~ 284 (635)
++.++| +++++++.+.+..+.+|
T Consensus 11 aagVvg-lll~vii~l~~~~~iRR 33 (35)
T 1iij_A 11 IATVVG-VLLFLILVVVVGILIKR 33 (35)
T ss_dssp HHHHHH-HHHHHHHTTTTTHHHHH
T ss_pred HHHHHH-HHHHHHHHHHhheEEee
Confidence 333444 33333333333333333
No 457
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=46.32 E-value=13 Score=26.84 Aligned_cols=17 Identities=53% Similarity=0.716 Sum_probs=8.8
Q ss_pred eehhhHHHHHHH-HHHHh
Q 006677 263 IAVGGSAVLLLV-ALVIL 279 (635)
Q Consensus 263 ivvg~~~~~llv-~~~i~ 279 (635)
+++|+++.++++ .+.++
T Consensus 12 ivlGg~~~lll~~glcI~ 29 (70)
T 2klu_A 12 IVLGGVAGLLLFIGLGIF 29 (70)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHH
Confidence 566666555544 34444
No 458
>2l34_A TYRO protein tyrosine kinase-binding protein; immunoreceptor, transmembrane assembly, DAP12, protein bindi; NMR {Homo sapiens} PDB: 2l35_B
Probab=41.99 E-value=7 Score=24.24 Aligned_cols=25 Identities=28% Similarity=0.498 Sum_probs=15.0
Q ss_pred cceeeeeehhhHHHHHHHHHHHhhh
Q 006677 257 LGAIIAIAVGGSAVLLLVALVILCY 281 (635)
Q Consensus 257 ~~~ii~ivvg~~~~~llv~~~i~~~ 281 (635)
.+++.+++++.++..+++++.++++
T Consensus 6 ~gaIaGIVvgdi~~t~~i~~~vy~~ 30 (33)
T 2l34_A 6 PGVLAGIVVGDLVLTVLIALAVYFL 30 (33)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cceEEeEeHHHHHHHHHHHHHHhhe
Confidence 4566677777766655555555444
No 459
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=40.35 E-value=48 Score=26.29 Aligned_cols=48 Identities=10% Similarity=0.109 Sum_probs=35.4
Q ss_pred CCccCcCCcccccCCCCCcEEEeecCCCCCCCCCCCCCCCcccEEeeccC
Q 006677 79 IGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHN 128 (635)
Q Consensus 79 ~~l~g~l~~~~l~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~N 128 (635)
.+++ .|....|.+.++|+.+.|-.+ ++..=...|.++.+|+.+.+...
T Consensus 6 ~~vt-~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 6 EPVV-GMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp CCCC-SSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCS
T ss_pred CccC-EecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCC
Confidence 3445 566678999999999988765 44233467889999999988764
No 460
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=38.09 E-value=1.1e+02 Score=32.90 Aligned_cols=47 Identities=19% Similarity=0.147 Sum_probs=34.8
Q ss_pred CHHHHHHHHHHHH--HHHHHHHhcCCCCceecCCCCCCeEEcCCCCeEEeecCCCC
Q 006677 437 DWETRVKILLGTA--RGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTP 490 (635)
Q Consensus 437 ~~~~~~~i~~~ia--~~l~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~DfGla~ 490 (635)
.+..+..++..+| .-+.|+=.-| |=.++|||++.+|++.=+|||..-
T Consensus 453 ~~~a~~nF~~S~A~ySvv~YILGig-------DRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 453 SAEVMDTYVKSCAGYCVITYILGVG-------DRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTCC-------CCCTTSEEECTTSCEEECCCSSCT
T ss_pred cHHHHHHHHHHHHHHhHhheeeecc-------CCCCcceeEcCCCCEeeeehHHhh
Confidence 3556666666654 3466665544 778899999999999999999863
No 461
>2llm_A Amyloid beta A4 protein; alzheimer'S disease, protein fibril; NMR {Homo sapiens} PDB: 2loh_A
Probab=34.72 E-value=12 Score=24.50 Aligned_cols=26 Identities=27% Similarity=0.586 Sum_probs=14.8
Q ss_pred CcceeeeeehhhHHHHHHHHHHHhhh
Q 006677 256 GLGAIIAIAVGGSAVLLLVALVILCY 281 (635)
Q Consensus 256 ~~~~ii~ivvg~~~~~llv~~~i~~~ 281 (635)
+.+++++..+++++++.++++.+++.
T Consensus 15 srga~iGL~v~gVai~~vIVvsl~ml 40 (43)
T 2llm_A 15 NKGAIIGLMVGGVVIATVIVITLVML 40 (43)
Confidence 44567777777666655544444433
No 462
>1zza_A Stannin, AG8_1; helix, membrane protein; NMR {Homo sapiens}
Probab=22.53 E-value=84 Score=22.96 Aligned_cols=20 Identities=30% Similarity=0.642 Sum_probs=9.7
Q ss_pred HHHHHHHHHHhhhhccccCC
Q 006677 269 AVLLLVALVILCYCLKKKDN 288 (635)
Q Consensus 269 ~~~llv~~~i~~~~~~r~~~ 288 (635)
+++.+-+++..|||.-|-++
T Consensus 23 avaalg~li~gcwcylrlqr 42 (90)
T 1zza_A 23 AIAALGALILGCWCYLRLQR 42 (90)
T ss_dssp HHHHHHHHHHHHHTTTSSCS
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 33344444555666655443
Done!