BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006678
(635 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1LXT|A Chain A, Structure Of Phosphotransferase Phosphoglucomutase From
Rabbit
pdb|1LXT|B Chain B, Structure Of Phosphotransferase Phosphoglucomutase From
Rabbit
pdb|1C47|A Chain A, Binding Driven Structural Changes In Crystaline
Phosphoglucomutase Associated With Chemical Reaction
pdb|1C47|B Chain B, Binding Driven Structural Changes In Crystaline
Phosphoglucomutase Associated With Chemical Reaction
pdb|1C4G|A Chain A, Phosphoglucomutase Vanadate Based Transition State Analog
Complex
pdb|1C4G|B Chain B, Phosphoglucomutase Vanadate Based Transition State Analog
Complex
Length = 561
Score = 607 bits (1565), Expect = e-174, Method: Compositional matrix adjust.
Identities = 320/573 (55%), Positives = 402/573 (70%), Gaps = 28/573 (4%)
Query: 79 IKVNSVPTKPIEGQKTGTSGLRKKVKVFKQE-NYLANWIQALFNSLPPEDYKNGHLVLGG 137
+K+ +V TK QK GTSGLRK+VKVF+ NY N+IQ++ +++ P + LV+GG
Sbjct: 1 VKIVTVKTKAYPDQKPGTSGLRKRVKVFQSSTNYAENFIQSIISTVEPAQRQEATLVVGG 60
Query: 138 DGRYFNKEXXXXXXXXXXGNGVGKIMVGRDGIMSTPAVSAVIRKQKANGGFIMSASHNPG 197
DGR++ KE NG+G++++G++GI+STPAVS +IRK KA GG I++ASHNPG
Sbjct: 61 DGRFYMKEAIQLIVRIAAANGIGRLVIGQNGILSTPAVSCIIRKIKAIGGIILTASHNPG 120
Query: 198 GPEYDWGIKFNYSSGQPAPESITDKIYGNTLSISEIKMADIPDVDLSSLGVTNFG----- 252
GP D+GIKFN S+G PAPE+ITDKI+ + +I E + VDL LG F
Sbjct: 121 GPNGDFGIKFNISNGGPAPEAITDKIFQISKTIEEYAICPDLKVDLGVLGKQQFDLENKF 180
Query: 253 -NFSVEVVDPVSDYLELMENVFDFPLIRSLLSRSD-FRFVFDAMHAVTGAYAKPIFVEKL 310
F+VE+VD V Y ++ N+FDF ++ LLS + + DAMH V G Y K I E+L
Sbjct: 181 KPFTVEIVDSVEAYATMLRNIFDFNALKELLSGPNRLKIRIDAMHGVVGPYVKKILCEEL 240
Query: 311 GAKPDSILNGVPLEDFGHGHPDPNLTYARDLVAIMY-GENGPDFGAASDGDGDRNMILGK 369
GA +S +N VPLEDFG HPDPNLTYA DLV M GE+ DFGAA DGDGDRNMILGK
Sbjct: 241 GAPANSAVNCVPLEDFGGHHPDPNLTYAADLVETMKSGEH--DFGAAFDGDGDRNMILGK 298
Query: 370 -GFFVTPSDSVAIIAANAQEAIPYFK-SGPKGLARSMPTSGALDRVAEKLKLPFFEVPTG 427
GFFV PSDSVA+IAAN +IPYF+ +G +G ARSMPTSGALDRVA K+ +E PTG
Sbjct: 299 HGFFVNPSDSVAVIAANIF-SIPYFQQTGVRGFARSMPTSGALDRVANATKIALYETPTG 357
Query: 428 WKFFGNLMDARKLSVCGEESFGTGSDHIREKDGIWAVLAWLSIVAHRNKDKKPGEKLISV 487
WKFFGNLMDA KLS+CGEESFGTGSDHIREKDG+WAVLAWLSI+A R + SV
Sbjct: 358 WKFFGNLMDASKLSLCGEESFGTGSDHIREKDGLWAVLAWLSILATRKQ---------SV 408
Query: 488 SDVVKAHWATYGRNFFSRYDYEECESEGANKMIGYLRDLV-SKSKAGDKYGN----YVLQ 542
D++K HW +GRNFF+RYDYEE E+EGA KM+ L L+ +S G ++ Y ++
Sbjct: 409 EDILKDHWHKFGRNFFTRYDYEEVEAEGATKMMKDLEALMFDRSFVGKQFSANDKVYTVE 468
Query: 543 FADDFAYTDPVDGSVASKQGVRFVFTDGSRIIFRLSGTGSAGATVRIYIEQFEPDVSKHE 602
AD+F Y DPVDGSV+ QG+R +F DGSRIIFRLSGTGSAGAT+R+YI+ +E D +K
Sbjct: 469 KADNFEYHDPVDGSVSKNQGLRLIFADGSRIIFRLSGTGSAGATIRLYIDSYEKDNAKIN 528
Query: 603 MDAQSALKPLIDLALSVSKLRDFTGREKPTVIT 635
D Q L PLI +AL VS+L++ TGR PTVIT
Sbjct: 529 QDPQVMLAPLISIALKVSQLQERTGRTAPTVIT 561
>pdb|1JDY|A Chain A, Rabbit Muscle Phosphoglucomutase
pdb|1JDY|B Chain B, Rabbit Muscle Phosphoglucomutase
pdb|1VKL|A Chain A, Rabbit Muscle Phosphoglucomutase
pdb|1VKL|B Chain B, Rabbit Muscle Phosphoglucomutase
pdb|3PMG|A Chain A, Structure Of Rabbit Muscle Phosphoglucomutase At 2.4
Angstroms Resolution. Use Of Freezing Point Depressant
And Reduced Temperature To Enhance Diffractivity
pdb|3PMG|B Chain B, Structure Of Rabbit Muscle Phosphoglucomutase At 2.4
Angstroms Resolution. Use Of Freezing Point Depressant
And Reduced Temperature To Enhance Diffractivity
Length = 561
Score = 605 bits (1561), Expect = e-173, Method: Compositional matrix adjust.
Identities = 319/573 (55%), Positives = 401/573 (69%), Gaps = 28/573 (4%)
Query: 79 IKVNSVPTKPIEGQKTGTSGLRKKVKVFKQE-NYLANWIQALFNSLPPEDYKNGHLVLGG 137
+K+ +V TK QK GTSGLRK+VKVF+ NY N+IQ++ +++ P + LV+GG
Sbjct: 1 VKIVTVKTKAYPDQKPGTSGLRKRVKVFQSSTNYAENFIQSIISTVEPAQRQEATLVVGG 60
Query: 138 DGRYFNKEXXXXXXXXXXGNGVGKIMVGRDGIMSTPAVSAVIRKQKANGGFIMSASHNPG 197
DGR++ KE NG+G++++G++GI+STPAVS +IRK KA GG I++A HNPG
Sbjct: 61 DGRFYMKEAIQLIVRIAAANGIGRLVIGQNGILSTPAVSCIIRKIKAIGGIILTAXHNPG 120
Query: 198 GPEYDWGIKFNYSSGQPAPESITDKIYGNTLSISEIKMADIPDVDLSSLGVTNFG----- 252
GP D+GIKFN S+G PAPE+ITDKI+ + +I E + VDL LG F
Sbjct: 121 GPNGDFGIKFNISNGGPAPEAITDKIFQISKTIEEYAICPDLKVDLGVLGKQQFDLENKF 180
Query: 253 -NFSVEVVDPVSDYLELMENVFDFPLIRSLLSRSD-FRFVFDAMHAVTGAYAKPIFVEKL 310
F+VE+VD V Y ++ N+FDF ++ LLS + + DAMH V G Y K I E+L
Sbjct: 181 KPFTVEIVDSVEAYATMLRNIFDFNALKELLSGPNRLKIRIDAMHGVVGPYVKKILCEEL 240
Query: 311 GAKPDSILNGVPLEDFGHGHPDPNLTYARDLVAIMY-GENGPDFGAASDGDGDRNMILGK 369
GA +S +N VPLEDFG HPDPNLTYA DLV M GE+ DFGAA DGDGDRNMILGK
Sbjct: 241 GAPANSAVNCVPLEDFGGHHPDPNLTYAADLVETMKSGEH--DFGAAFDGDGDRNMILGK 298
Query: 370 -GFFVTPSDSVAIIAANAQEAIPYFK-SGPKGLARSMPTSGALDRVAEKLKLPFFEVPTG 427
GFFV PSDSVA+IAAN +IPYF+ +G +G ARSMPTSGALDRVA K+ +E PTG
Sbjct: 299 HGFFVNPSDSVAVIAANIF-SIPYFQQTGVRGFARSMPTSGALDRVANATKIALYETPTG 357
Query: 428 WKFFGNLMDARKLSVCGEESFGTGSDHIREKDGIWAVLAWLSIVAHRNKDKKPGEKLISV 487
WKFFGNLMDA KLS+CGEESFGTGSDHIREKDG+WAVLAWLSI+A R + SV
Sbjct: 358 WKFFGNLMDASKLSLCGEESFGTGSDHIREKDGLWAVLAWLSILATRKQ---------SV 408
Query: 488 SDVVKAHWATYGRNFFSRYDYEECESEGANKMIGYLRDLV-SKSKAGDKYGN----YVLQ 542
D++K HW +GRNFF+RYDYEE E+EGA KM+ L L+ +S G ++ Y ++
Sbjct: 409 EDILKDHWHKFGRNFFTRYDYEEVEAEGATKMMKDLEALMFDRSFVGKQFSANDKVYTVE 468
Query: 543 FADDFAYTDPVDGSVASKQGVRFVFTDGSRIIFRLSGTGSAGATVRIYIEQFEPDVSKHE 602
AD+F Y DPVDGSV+ QG+R +F DGSRIIFRLSGTGSAGAT+R+YI+ +E D +K
Sbjct: 469 KADNFEYHDPVDGSVSKNQGLRLIFADGSRIIFRLSGTGSAGATIRLYIDSYEKDNAKIN 528
Query: 603 MDAQSALKPLIDLALSVSKLRDFTGREKPTVIT 635
D Q L PLI +AL VS+L++ TGR PTVIT
Sbjct: 529 QDPQVMLAPLISIALKVSQLQERTGRTAPTVIT 561
>pdb|1KFI|A Chain A, Crystal Structure Of The Exocytosis-Sensitive
Phosphoprotein, Pp63PARAFUSIN (PHOSPHOGLUCOMUTASE) FROM
Paramecium
pdb|1KFI|B Chain B, Crystal Structure Of The Exocytosis-Sensitive
Phosphoprotein, Pp63PARAFUSIN (PHOSPHOGLUCOMUTASE) FROM
Paramecium
pdb|1KFQ|A Chain A, Crystal Structure Of Exocytosis-Sensitive Phosphoprotein,
Pp63PARAFUSIN (PHOSPHOGLUCOMUTSE) FROM PARAMECIUM. OPEN
Form
pdb|1KFQ|B Chain B, Crystal Structure Of Exocytosis-Sensitive Phosphoprotein,
Pp63PARAFUSIN (PHOSPHOGLUCOMUTSE) FROM PARAMECIUM. OPEN
Form
Length = 572
Score = 560 bits (1444), Expect = e-160, Method: Compositional matrix adjust.
Identities = 304/576 (52%), Positives = 380/576 (65%), Gaps = 42/576 (7%)
Query: 86 TKPIEGQKTGTSGLRKKVKVFKQENYLANWIQALFNSLPPEDYK-NGHLVLGGDGRYFNK 144
T+P GQK GTSGLRKKV Q NYL N++Q++FN+L ++ K L +GGDGRYFN+
Sbjct: 13 TQPYAGQKPGTSGLRKKVSEATQPNYLENFVQSIFNTLRKDELKPKNVLFVGGDGRYFNR 72
Query: 145 EXXXXXXXXXXGNGVGKIMVGRDGIMSTPAVSAVIRKQKAN-----GGFIMSASHNPGGP 199
+ N + ++ VG+ G+MSTPA S IRK GG I++ASHNPGG
Sbjct: 73 QAIFSIIRLAYANDISEVHVGQAGLMSTPASSHYIRKVNEEVGNCIGGIILTASHNPGGK 132
Query: 200 EY-DWGIKFNYSSGQPAPESITDKIYGNTLSISEIKMADIP---DVDLSSLGVTNF---- 251
E+ D+GIKFN +G PAPE TD+IY +T I E D ++L +GV F
Sbjct: 133 EHGDFGIKFNVRTGAPAPEDFTDQIYTHTTKIKEYLTVDYEFEKHINLDQIGVYKFEGTR 192
Query: 252 ---GNFSVEVVDPVSDYLELMENVFDFPLIRSLLSRSDFRFVFDAMHAVTGAYAKPIFVE 308
+F V+VVD V DY +LM+ +FDF L++ L S DF F FD MH V G YAK IF
Sbjct: 193 LEKSHFEVKVVDTVQDYTQLMQKLFDFDLLKGLFSNKDFSFRFDGMHGVAGPYAKHIFGT 252
Query: 309 KLGAKPDSILNGVPLEDFGHGHPDPNLTYARDLVAIMYGENG------PDFGAASDGDGD 362
LG +S+LN P EDFG GHPDPNLTYA DLV ++ P FGAA DGD D
Sbjct: 253 LLGCSKESLLNCDPSEDFGGGHPDPNLTYAHDLVELLDIHKKKDVGTVPQFGAACDGDAD 312
Query: 363 RNMILGKGFFVTPSDSVAIIAANAQEAIPYFKSGPKGLARSMPTSGALDRVAEKLKLPFF 422
RNMILG+ FFVTPSDS+A+IAANA FK+G G ARSMPTSGALD+VA K + F
Sbjct: 313 RNMILGRQFFVTPSDSLAVIAANAN---LIFKNGLLGAARSMPTSGALDKVAAKNGIKLF 369
Query: 423 EVPTGWKFFGNLMDARKLSVCGEESFGTGSDHIREKDGIWAVLAWLSIVAHRNKDKKPGE 482
E PTGWKFFGNLMDA +++CGEESFGTGS+HIREKDGIWAVLAWL+I+AH+NK+ +
Sbjct: 370 ETPTGWKFFGNLMDAGLINLCGEESFGTGSNHIREKDGIWAVLAWLTILAHKNKNT---D 426
Query: 483 KLISVSDVVKAHWATYGRNFFSRYDYEECESEGANKMIGYLR---DLVSKSKAGDKYGNY 539
++V ++V +W +GRN++SRYDYE+ +S GANKM+ +L+ + K G+K
Sbjct: 427 HFVTVEEIVTQYWQQFGRNYYSRYDYEQVDSAGANKMMEHLKTKFQYFEQLKQGNK---- 482
Query: 540 VLQFADDFAYTDPVDGSVASKQGVRFVFTDGSRIIFRLSGTGSAGATVRIYIEQFEPDVS 599
AD + Y DPVD SV+ QGVRFVF DGSRIIFRLSGTGS GAT+RIY EQFE
Sbjct: 483 ----ADIYDYVDPVDQSVSKNQGVRFVFGDGSRIIFRLSGTGSVGATIRIYFEQFEQQQI 538
Query: 600 KHEMDAQSALKPLIDLALSVSKLRDFTGREKPTVIT 635
+HE +AL +I L L +S + FTGR +PTVIT
Sbjct: 539 QHE--TATALANIIKLGLEISDIAQFTGRNEPTVIT 572
>pdb|1TUO|A Chain A, Crystal Structure Of Putative Phosphomannomutase From
Thermus Thermophilus Hb8
Length = 464
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 95/361 (26%), Positives = 151/361 (41%), Gaps = 56/361 (15%)
Query: 130 NGHLVLGGDGRYFNKEXXXXXXXXXXGNGVGKIMVGRDGIMSTPAVSAVIRKQKANGGFI 189
G +V+G D R+ G G+ +++ G + TP +S +R KA GG +
Sbjct: 48 GGLVVVGHDTRFLADAFARALSGHLAGMGLKVVLL--KGPVPTPLLSFAVRHLKAAGGAM 105
Query: 190 MSASHNPGGPEYDWGIKFNYSSGQPAPESITDKIYGNTLSISEIKMADIPDVDLSSLGVT 249
++ASHNP P+Y G+KF ++G P + I A +P+ + G
Sbjct: 106 LTASHNP--PQY-LGVKFKDATGGPIAQEEAKAIE-----------ALVPEEARALEG-- 149
Query: 250 NFGNFSVEVVDPVSDYLELMENVFDFPLIRSLLSRSDFRFVF--DAMHAVTGAYAK---- 303
+ E +D Y E ++ D L + S F V D+M + K
Sbjct: 150 -----AYETLDLREAYFEALKAHLD------LKALSGFSGVLYHDSMGGAGAGFLKGFLR 198
Query: 304 ----PIFVEKLGAKPDSILNGVPLEDFGHGHPDPNLTYARDLVAIMYGENGPDFGAASDG 359
I V + +P + +GV +P+P +A++ E P F A+DG
Sbjct: 199 HVGLEIPVRPIREEPHPLFHGV--------NPEPIPKNLGVTLAVLGPETPPSFAVATDG 250
Query: 360 DGDR-NMILGKGFFVTPSDSVAIIAANAQEAIPYFKSGPKGLA-RSMPTSGALDRVAEKL 417
D DR ++L G F P + + A+ F+ G +G A ++ + LDR+ E+L
Sbjct: 251 DADRVGVVLPGGVFFNPHQVLTTL------ALYRFRKGHRGRAVKNFAVTWLLDRLGERL 304
Query: 418 KLPFFEVPTGWKFFGNLMDARKLSVCGEESFGTG-SDHIREKDGIWAVLAWLSIVAHRNK 476
P G+K+ + GEES G G +H+ E+DGI L L VA K
Sbjct: 305 GFGVTTTPVGFKWIKEEFLKGDCFIGGEESGGVGYPEHLPERDGILTSLLLLESVAATGK 364
Query: 477 D 477
D
Sbjct: 365 D 365
>pdb|1WQA|A Chain A, Crystal Structure Of Pyrococcus Horikoshii
PhosphomannomutasePHOSPHOGLUCOMUTASE COMPLEXED WITH MG2+
pdb|1WQA|B Chain B, Crystal Structure Of Pyrococcus Horikoshii
PhosphomannomutasePHOSPHOGLUCOMUTASE COMPLEXED WITH MG2+
pdb|1WQA|C Chain C, Crystal Structure Of Pyrococcus Horikoshii
PhosphomannomutasePHOSPHOGLUCOMUTASE COMPLEXED WITH MG2+
pdb|1WQA|D Chain D, Crystal Structure Of Pyrococcus Horikoshii
PhosphomannomutasePHOSPHOGLUCOMUTASE COMPLEXED WITH MG2+
Length = 455
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 120/479 (25%), Positives = 197/479 (41%), Gaps = 116/479 (24%)
Query: 160 GKIMVGRD----GIMSTPAVSAVIRKQKANGGFIMSASHNPGGPEYDWGIKFNYSSG--- 212
G + VG D GI TPAV + A+GG +++ASHNP PEY+ GIK +G
Sbjct: 64 GLLSVGCDVIDVGIAPTPAVQWATKHFNADGGAVITASHNP--PEYN-GIKLLEPNGMGL 120
Query: 213 QPAPESITDKIY-------GNTLSISEIKMADIPDVDLSSLGVTNFGNFSVEVVDPVSDY 265
+ E+I ++++ I E++ DI + Y
Sbjct: 121 KKEREAIVEELFFKEDFDRAKWYEIGEVRREDI-----------------------IKPY 157
Query: 266 LELMENVFDFPLIRSLLSRSDFRFVFDAMHAVTGAYAKPIFVEKLGAKPDSILNGVPLED 325
+E +++ D I+ R F V D + G+ P + +LG K ++ N P
Sbjct: 158 IEAIKSKVDVEAIK---KRKPF-VVVDTSNG-AGSLTLPYLLRELGCKVITV-NAQPDGY 211
Query: 326 FGHGHPDPNLTYARDLVAIMYGENGPDFGAASDGDGDRNMILGK-GFFVTPSDSVAIIAA 384
F +P+PN ++ + I+ G DFG A DGD DR + + + G F+ + A++A
Sbjct: 212 FPARNPEPNEENLKEFMEIVKA-LGADFGVAQDGDADRAVFIDENGRFIQGDKTFALVA- 269
Query: 385 NAQEAIPYFKSGPKGLARSMPTSGALDRVAEKLKLPFFEVPTGWKFFGNLMDARKL---- 440
+A+ K G L ++ TS LD +A+K G+L+ AR L
Sbjct: 270 ---DAVLKEKGGGL-LVTTVATSNLLDDIAKKHGAKVMRTKV-----GDLIVARALYENN 320
Query: 441 -SVCGEESFGT-GSDHIREKDGIWAVLAWLSIVAHRNKDKKPGEKLISVSDVVKAHWATY 498
++ GEE+ G +H+ +DG V + I +A
Sbjct: 321 GTIGGEENGGVIFPEHVLGRDGAMTVAKVVEI------------------------FAKS 356
Query: 499 GRNFFSRYDYEECESEGANKMIGYLRDLVSKSKAGDKYG--NYVLQFADDFAYTDPVDGS 556
G+ F SE +++ Y + + GD++ N V + A + YT
Sbjct: 357 GKKF----------SELIDELPKYYQIKTKRHVEGDRHAIVNKVAEMARERGYT------ 400
Query: 557 VASKQGVRFVFTDGSRIIFRLSGTGSAGATVRIYIEQFEPDVSKHEMDAQSALKPLIDL 615
V + G + +F DG ++ R SGT +RI+ E +K + AQ L I+L
Sbjct: 401 VDTTDGAKIIFEDGW-VLVRASGTEP---IIRIFSE------AKSKEKAQEYLNLGIEL 449
>pdb|3OLP|A Chain A, Crystal Structure Of A Bacterial Phosphoglucomutase, An
Enzyme Important In The Virulence Of Multiple Human
Pathogens
pdb|3OLP|B Chain B, Crystal Structure Of A Bacterial Phosphoglucomutase, An
Enzyme Important In The Virulence Of Multiple Human
Pathogens
Length = 570
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 130/543 (23%), Positives = 219/543 (40%), Gaps = 76/543 (13%)
Query: 93 KTGTSGLRKKVKVFKQENYLANWIQALFNSLPPEDYKNG---HLVLGGDGRYFNKEXXXX 149
K GTSG R + ++ I A+ ++ E KNG +G D ++
Sbjct: 65 KFGTSGHRGSAG---RHSFNEPHILAIAQAIAEERAKNGITGPCYVGKDTHALSEPAFIS 121
Query: 150 XXXXXXGNGVGKIMVGRDGIMSTPAVS-AVIRKQKANG----GFIMSASHNPGGPEYDWG 204
NGV I+ +G TPAVS A++ K G G +++ SHNP PE D G
Sbjct: 122 VLEVLAANGVDVIVQENNGFTPTPAVSNAILVHNKKGGPLADGIVITPSHNP--PE-DGG 178
Query: 205 IKFNYSSGQPAPESITDKIYGNTLSISEIKMADIPDVDLSSLGVTNFGNFSVEVVDPVSD 264
IK+N +G PA ++T + ++ + + + L + + V+ VD V
Sbjct: 179 IKYNPPNGGPADTNVTKVVEDRANALLAGGLQGVKRISLDAA----MASGHVKAVDLVQP 234
Query: 265 YLELMENVFDFPLIRSLLSRSDFRFVFDAMHAVTGAYAKPIFVE-KLGAKPDSILNGVPL 323
++E + ++ D I+ ++ D + Y K I KL +++N
Sbjct: 235 FVEGLADIVDMAAIQ----KAGLTLGVDPLGGSGIEYWKRIAEHYKLNL---TLVNDQVD 287
Query: 324 EDFGHGHPDPNLTYARD------LVAIMYGENGPDFGAASDGDGDRNMILGKGFFVTPSD 377
+ F H D + D + ++ + D A+D D DR+ I+ + P+
Sbjct: 288 QTFRFMHLDKDGAIRMDCSSECAMAGLLALRDKFDLAFANDPDYDRHGIVTPAGLMNPNH 347
Query: 378 SVAIIAANAQEAIPY-FKSGP-----KGLARSMPTSGALDRVAEKLKLPFFEVPTGWKFF 431
+A+ AI Y F+ P + +++ +S +DRV L EVP G+K+F
Sbjct: 348 YLAV-------AINYLFQHRPLWGKDVAVGKTLVSSAMIDRVVNDLGRKLVEVPVGFKWF 400
Query: 432 GNLMDARKLSVCGEESFGT------GSDHIREKDGIWAVLAWLSIVAHRNKDKKPGEKLI 485
+ + GEES G G+ +KDGI L I A K+ P E
Sbjct: 401 VDGLFDGSFGFGGEESAGASFLRFDGTPWSTDKDGIIMCLLAAEITAVTGKN--PQEHYN 458
Query: 486 SVSDVVKAHWATYGRNFFSRYDYEECESEGANKMIGYLRDLVSKSK-AGDKYGNYVLQFA 544
++ A +G ++R ++ A + ++VS S AGD
Sbjct: 459 ELA-------ARFGAPSYNRLQASATSAQKA-ALSKLSPEMVSASTLAGDPI-------- 502
Query: 545 DDFAYTDPVDGSVASKQGVRFVFTDGSRIIFRLSGTGSAGATVRIYIEQFEPDVSKHEMD 604
A G+ AS G++ V TD R SGT A +IY E F + + +++
Sbjct: 503 --TARLTAAPGNGASIGGLK-VMTDNGWFAARPSGTEDA---YKIYCESFLGEEHRKQIE 556
Query: 605 AQS 607
++
Sbjct: 557 KEA 559
>pdb|3NA5|A Chain A, Crystal Structure Of A Bacterial Phosphoglucomutase, An
Enzyme Important In The Virulence Of Several Human
Pathogens.
pdb|3NA5|B Chain B, Crystal Structure Of A Bacterial Phosphoglucomutase, An
Enzyme Important In The Virulence Of Several Human
Pathogens
Length = 570
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 130/543 (23%), Positives = 219/543 (40%), Gaps = 76/543 (13%)
Query: 93 KTGTSGLRKKVKVFKQENYLANWIQALFNSLPPEDYKNG---HLVLGGDGRYFNKEXXXX 149
K GTSG R + ++ I A+ ++ E KNG +G D ++
Sbjct: 65 KFGTSGHRGSAG---RHSFNEPHILAIAQAIAEERAKNGITGPCYVGKDTHALSEPAFIS 121
Query: 150 XXXXXXGNGVGKIMVGRDGIMSTPAVS-AVIRKQKANG----GFIMSASHNPGGPEYDWG 204
NGV I+ +G TPAVS A++ K G G +++ SHNP PE D G
Sbjct: 122 VLEVLAANGVDVIVQENNGFTPTPAVSNAILVHNKKGGPLADGIVITPSHNP--PE-DGG 178
Query: 205 IKFNYSSGQPAPESITDKIYGNTLSISEIKMADIPDVDLSSLGVTNFGNFSVEVVDPVSD 264
IK+N +G PA ++T + ++ + + + L + + V+ VD V
Sbjct: 179 IKYNPPNGGPADTNVTKVVEDRANALLAGGLQGVKRISLDAA----MASGHVKAVDLVQP 234
Query: 265 YLELMENVFDFPLIRSLLSRSDFRFVFDAMHAVTGAYAKPIFVE-KLGAKPDSILNGVPL 323
++E + ++ D I+ ++ D + Y K I KL +++N
Sbjct: 235 FVEGLADIVDMAAIQ----KAGLTLGVDPLGGSGIEYWKRIAEHYKLNL---TLVNDQVD 287
Query: 324 EDFGHGHPDPNLTYARD------LVAIMYGENGPDFGAASDGDGDRNMILGKGFFVTPSD 377
+ F H D + D + ++ + D A+D D DR+ I+ + P+
Sbjct: 288 QTFRFMHLDKDGAIRMDCSSEXAMAGLLALRDKFDLAFANDPDYDRHGIVTPAGLMNPNH 347
Query: 378 SVAIIAANAQEAIPY-FKSGP-----KGLARSMPTSGALDRVAEKLKLPFFEVPTGWKFF 431
+A+ AI Y F+ P + +++ +S +DRV L EVP G+K+F
Sbjct: 348 YLAV-------AINYLFQHRPLWGKDVAVGKTLVSSAMIDRVVNDLGRKLVEVPVGFKWF 400
Query: 432 GNLMDARKLSVCGEESFGT------GSDHIREKDGIWAVLAWLSIVAHRNKDKKPGEKLI 485
+ + GEES G G+ +KDGI L I A K+ P E
Sbjct: 401 VDGLFDGSFGFGGEESAGASFLRFDGTPWSTDKDGIIMCLLAAEITAVTGKN--PQEHYN 458
Query: 486 SVSDVVKAHWATYGRNFFSRYDYEECESEGANKMIGYLRDLVSKSK-AGDKYGNYVLQFA 544
++ A +G ++R ++ A + ++VS S AGD
Sbjct: 459 ELA-------ARFGAPSYNRLQASATSAQKA-ALSKLSPEMVSASTLAGDPI-------- 502
Query: 545 DDFAYTDPVDGSVASKQGVRFVFTDGSRIIFRLSGTGSAGATVRIYIEQFEPDVSKHEMD 604
A G+ AS G++ V TD R SGT A +IY E F + + +++
Sbjct: 503 --TARLTAAPGNGASIGGLK-VMTDNGWFAARPSGTEDA---YKIYCESFLGEEHRKQIE 556
Query: 605 AQS 607
++
Sbjct: 557 KEA 559
>pdb|2FUV|A Chain A, Phosphoglucomutase From Salmonella Typhimurium.
pdb|2FUV|B Chain B, Phosphoglucomutase From Salmonella Typhimurium
Length = 549
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 127/542 (23%), Positives = 214/542 (39%), Gaps = 74/542 (13%)
Query: 93 KTGTSGLRKKVKVFKQENYLANWIQALFNSLPPEDYKNG---HLVLGGDGRYFNKEXXXX 149
K GTSG R + ++ I A+ ++ E KNG +G D ++
Sbjct: 44 KFGTSGHRGSAG---RHSFNEPHILAIAQAIAEERAKNGITGPCYVGKDTHALSEPAFIS 100
Query: 150 XXXXXXGNGVGKIMVGRDGIMSTPAVS-AVIRKQKANG----GFIMSASHNPGGPEYDWG 204
NGV I+ +G TPAVS A++ K G G +++ SHNP PE D G
Sbjct: 101 VLEVLAANGVDVIVQENNGFTPTPAVSNAILVHNKKGGPLADGIVITPSHNP--PE-DGG 157
Query: 205 IKFNYSSGQPAPESITDKIYGNTLSISEIKMADIPDVDLSSLGVTNFGNFSVEVVDPVSD 264
IK+N +G PA ++T + ++ + + + L + + V+ VD V
Sbjct: 158 IKYNPPNGGPADTNVTKVVEDRANALLAGGLQGVKRISLDAAXASGH----VKAVDLVQP 213
Query: 265 YLELMENVFDFPLIRSLLSRSDFRFVFDAMHAVTGAYAKPIFVE-KLGAKPDSILNGVPL 323
++E + ++ D I+ ++ D + Y K I KL +++N
Sbjct: 214 FVEGLADIVDXAAIQ----KAGLTLGVDPLGGSGIEYWKRIAEHYKLNL---TLVNDQVD 266
Query: 324 EDFGHGHPDPNLTYARDL------VAIMYGENGPDFGAASDGDGDRNMILGKGFFVTPSD 377
+ F H D + D ++ + D A+D D DR+ I+ P+
Sbjct: 267 QTFRFXHLDKDGAIRXDCSSECAXAGLLALRDKFDLAFANDPDYDRHGIVTPAGLXNPNH 326
Query: 378 SVAIIAANAQEAIPY-FKSGP-----KGLARSMPTSGALDRVAEKLKLPFFEVPTGWKFF 431
+A+ AI Y F+ P + +++ +S +DRV L EVP G+K+F
Sbjct: 327 YLAV-------AINYLFQHRPLWGKDVAVGKTLVSSAXIDRVVNDLGRKLVEVPVGFKWF 379
Query: 432 GNLMDARKLSVCGEESFGT------GSDHIREKDGIWAVLAWLSIVAHRNKDKKPGEKLI 485
+ + GEES G G+ +KDGI L I A K+ P E
Sbjct: 380 VDGLFDGSFGFGGEESAGASFLRFDGTPWSTDKDGIIXCLLAAEITAVTGKN--PQEHYN 437
Query: 486 SVSDVVKAHWATYGRNFFSRYDYEECESEGANKMIGYLRDLVSKSKAGDKYGNYVLQFAD 545
++ A +G ++R ++ A + + + AGD
Sbjct: 438 ELA-------ARFGAPSYNRLQASATSAQKAALSKLSPEXVSASTLAGDPI--------- 481
Query: 546 DFAYTDPVDGSVASKQGVRFVFTDGSRIIFRLSGTGSAGATVRIYIEQFEPDVSKHEMDA 605
A G+ AS G++ V TD R SGT A +IY E F + + +++
Sbjct: 482 -TARLTAAPGNGASIGGLK-VXTDNGWFAARPSGTEDA---YKIYCESFLGEEHRKQIEK 536
Query: 606 QS 607
++
Sbjct: 537 EA 538
>pdb|2Z0F|A Chain A, Crystal Structure Of Putative Phosphoglucomutase From
Thermus Thermophilus Hb8
pdb|2Z0F|B Chain B, Crystal Structure Of Putative Phosphoglucomutase From
Thermus Thermophilus Hb8
Length = 524
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 107/443 (24%), Positives = 175/443 (39%), Gaps = 50/443 (11%)
Query: 85 PTKPIEGQKTGTSGLR-KKVKVFKQENYLANWIQALFNSLPPEDYKNGHLVLGGDGRYFN 143
P P+EG + GTSG R +K E ++ QA+ L P G L L D +
Sbjct: 17 PQNPLEGVRFGTSGHRGSSLKATFTEAHVLAIAQAI-AELRPSFGATGPLFLAKDTHALS 75
Query: 144 KEXXXXXXXXXXGNGVGKIMVGRDG-IMSTPAVSAVIRKQKANG-----GFIMSASHNPG 197
+ +G+ ++ V DG TP VS I + A+ G +++ SHNP
Sbjct: 76 EPAWATALSVFAAHGI-EVRVEADGDYTPTPLVSLAILEHNAHHEAKADGVLLTPSHNP- 133
Query: 198 GPEYDWGIKFNYSSGQPAPESITDKIYGNTLSISEIKMADIPDVDLSSLGVTNFGNFSVE 257
PE D G K+N +G PA IT I ++ + + + + L +
Sbjct: 134 -PE-DGGFKYNPPTGGPANARITRAIEERANALLQEGLKGVKRLPLRE------ALARAK 185
Query: 258 VVDPVSDYLELMENVFDFPLIRSLLSRSDFRFVFDAMHAVTG------AYAKPIFVEKLG 311
D Y+E + D IR+ S R D + + A + + +E +
Sbjct: 186 PFDYAGLYVEKVAEAVDLEAIRA----SGLRIGVDPLGGASLRVWERLAESHGLPLEVVN 241
Query: 312 AKPDSILNGVPLEDFGHGHPDPNLTYARDLVAIMYGENGPDFGAASDGDGDRNMILGKGF 371
D +P + G D + YA + ++ ++ D +D D DR+ I+
Sbjct: 242 PTLDPTFRFMPKDHDGKIRMDCSSPYA--MAGLLALKDRFDLAIGNDPDADRHGIVTPRG 299
Query: 372 FVTPSDSVAIIAANAQEAIPYFKSGPKG-LARSMPTSGALDRVAEKLKLPFFEVPTGWKF 430
+ P+ +A A + +S P + ++ TS LDRVA+ L +E P G+K
Sbjct: 300 LMNPNHYLAA----ALHHLYTTRSWPGAKVGKTAVTSALLDRVAQALGREVYETPVGFKH 355
Query: 431 FGNLMDARKLSVCGEESFGT------GSDHIREKDGIWAVLAWLSIVAHRNKDKKPGEKL 484
F + L GEES G G +KDGI L ++A R +
Sbjct: 356 FVAGLLEGWLGFAGEESAGASFLRFDGRPFSTDKDGILMGLLAAELMAKRGQ-------- 407
Query: 485 ISVSDVVKAHWATYGRNFFSRYD 507
+ + +A GR +++R D
Sbjct: 408 -APDALYEALAEKLGRPYYARKD 429
>pdb|3PDK|A Chain A, Crystal Structure Of Phosphoglucosamine Mutase From B.
Anthracis
pdb|3PDK|B Chain B, Crystal Structure Of Phosphoglucosamine Mutase From B.
Anthracis
Length = 469
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 99/230 (43%), Gaps = 43/230 (18%)
Query: 164 VGRDGIMSTPAVSAVIRKQKANGGFIMSASHNPGGPEYDWGIKFNYSSGQPAPESITDKI 223
V R G++STP V+ + + A G ++SASHN P D GIKF S G +TD+
Sbjct: 92 VMRLGVISTPGVAYLTKALDAQAGVMISASHN---PVQDNGIKFFGSDGF----KLTDEQ 144
Query: 224 YGNTLSISEIKMADIPDVDLSSLGVTNFGNFSVEVVDPVSDYLELMENVFDFPLIRSLLS 283
++ + ++ ++P ++LG VSDY E + + I+ +
Sbjct: 145 EAEIEALLDKEVDELPRPTGTNLG-------------QVSDYFEGGQKYLQY--IKQTVE 189
Query: 284 R--SDFRFVFDAMHAVTGAYAKPIF------VEKLGAKPDSILNGVPLED-FGHGHPDPN 334
S D H T + A +F + +G P NG+ + D G HP
Sbjct: 190 EDFSGLHIALDCAHGATSSLAPYLFADLEADISTMGTSP----NGMNINDGVGSTHP--- 242
Query: 335 LTYARDLVAIMYGENGPDFGAASDGDGDRNMILGKGFFVTPSDSVAIIAA 384
+++A + E G D G A DGDGDR + + + + D + I A
Sbjct: 243 -----EVLAELVKEKGADIGLAFDGDGDRLIAVDEKGNIVDGDQIMFICA 287
>pdb|1K2Y|X Chain X, Crystal Structure Of Phosphomannomutase/phosphoglucomutase
S108a Mutant From P. Aeruginosa
Length = 463
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 98/225 (43%), Gaps = 44/225 (19%)
Query: 168 GIMSTPAVSAVIRKQKANGGFIMSASHNPGGPEYDWGIKFNYSSGQPAPESITDKIYGNT 227
G++ TP + + G +++ +HNP P+Y+ G K + G T
Sbjct: 83 GMVPTPVLYYAANVLEGKSGVMLTGAHNP--PDYN-GFKI--------------VVAGET 125
Query: 228 LSISEIKM--ADIPDVDLSSLGVTNFGNFSVEVVDPVSDYLELMENVFDFPLIRSLLSRS 285
L+ +I+ I DL+S G SVE VD + Y + + + D + + +
Sbjct: 126 LANEQIQALRERIEKNDLAS------GVGSVEQVDILPRYFKQIRD--DIAMAKPM---- 173
Query: 286 DFRFVFDAMHAVTGAYAKPIFVEKLGAKPDSILNGVPLEDFGHGHPDP----NLTYARDL 341
+ V D + V G A P +E LG + V +F + HPDP NL +DL
Sbjct: 174 --KVVVDCGNGVAGVIA-PQLIEALGCSVIPLYCEVD-GNFPNHHPDPGKPENL---KDL 226
Query: 342 VAIMYGENGPDFGAASDGDGDR-NMILGKGFFVTPSDSVAIIAAN 385
+A + EN D G A DGDGDR ++ G + P + + A +
Sbjct: 227 IAKVKAENA-DLGLAFDGDGDRVGVVTNTGTIIYPDRLLMLFAKD 270
>pdb|3RSM|A Chain A, Crystal Structure Of S108c Mutant Of PmmPGM
Length = 463
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 97/225 (43%), Gaps = 44/225 (19%)
Query: 168 GIMSTPAVSAVIRKQKANGGFIMSASHNPGGPEYDWGIKFNYSSGQPAPESITDKIYGNT 227
G++ TP + + G +++ HNP P+Y+ G K + G T
Sbjct: 83 GMVPTPVLYYAANVLEGKSGVMLTGCHNP--PDYN-GFKI--------------VVAGET 125
Query: 228 LSISEIKM--ADIPDVDLSSLGVTNFGNFSVEVVDPVSDYLELMENVFDFPLIRSLLSRS 285
L+ +I+ I DL+S G SVE VD + Y + + + D + + +
Sbjct: 126 LANEQIQALRERIEKNDLAS------GVGSVEQVDILPRYFKQIRD--DIAMAKPM---- 173
Query: 286 DFRFVFDAMHAVTGAYAKPIFVEKLGAKPDSILNGVPLEDFGHGHPDP----NLTYARDL 341
+ V D + V G A P +E LG + V +F + HPDP NL +DL
Sbjct: 174 --KVVVDCGNGVAGVIA-PQLIEALGCSVIPLYCEVD-GNFPNHHPDPGKPENL---KDL 226
Query: 342 VAIMYGENGPDFGAASDGDGDR-NMILGKGFFVTPSDSVAIIAAN 385
+A + EN D G A DGDGDR ++ G + P + + A +
Sbjct: 227 IAKVKAENA-DLGLAFDGDGDRVGVVTNTGTIIYPDRLLMLFAKD 270
>pdb|2FKF|A Chain A, PhosphomannomutasePHOSPHOGLUCOMUTASE FROM PSEUDOMONAS
AERUGINOSA WITH Alpha-D-Glucose 1,6-Bisphosphate Bound
Length = 462
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 97/225 (43%), Gaps = 44/225 (19%)
Query: 168 GIMSTPAVSAVIRKQKANGGFIMSASHNPGGPEYDWGIKFNYSSGQPAPESITDKIYGNT 227
G++ TP + + G +++ HNP P+Y+ G K + G T
Sbjct: 82 GMVPTPVLYYAANVLEGKSGVMLTGXHNP--PDYN-GFKI--------------VVAGET 124
Query: 228 LSISEIKM--ADIPDVDLSSLGVTNFGNFSVEVVDPVSDYLELMENVFDFPLIRSLLSRS 285
L+ +I+ I DL+S G SVE VD + Y + + + D + + +
Sbjct: 125 LANEQIQALRERIEKNDLAS------GVGSVEQVDILPRYFKQIRD--DIAMAKPM---- 172
Query: 286 DFRFVFDAMHAVTGAYAKPIFVEKLGAKPDSILNGVPLEDFGHGHPDP----NLTYARDL 341
+ V D + V G A P +E LG + V +F + HPDP NL +DL
Sbjct: 173 --KVVVDCGNGVAGVIA-PQLIEALGCSVIPLYCEVD-GNFPNHHPDPGKPENL---KDL 225
Query: 342 VAIMYGENGPDFGAASDGDGDR-NMILGKGFFVTPSDSVAIIAAN 385
+A + EN D G A DGDGDR ++ G + P + + A +
Sbjct: 226 IAKVKAENA-DLGLAFDGDGDRVGVVTNTGTIIYPDRLLMLFAKD 269
>pdb|1P5D|X Chain X, Enzyme-Ligand Complex Of P. Aeruginosa PmmPGM
pdb|1P5G|X Chain X, Enzyme-Ligand Complex Of P. Aeruginosa PmmPGM
pdb|1PCJ|X Chain X, Enzyme-Ligand Complex Of P. Aeruginosa PmmPGM
pdb|1PCM|X Chain X, Enzyme-Ligand Complex Of P. Aeruginosa PmmPGM
Length = 463
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 97/225 (43%), Gaps = 44/225 (19%)
Query: 168 GIMSTPAVSAVIRKQKANGGFIMSASHNPGGPEYDWGIKFNYSSGQPAPESITDKIYGNT 227
G++ TP + + G +++ HNP P+Y+ G K + G T
Sbjct: 83 GMVPTPVLYYAANVLEGKSGVMLTGXHNP--PDYN-GFKI--------------VVAGET 125
Query: 228 LSISEIKM--ADIPDVDLSSLGVTNFGNFSVEVVDPVSDYLELMENVFDFPLIRSLLSRS 285
L+ +I+ I DL+S G SVE VD + Y + + + D + + +
Sbjct: 126 LANEQIQALRERIEKNDLAS------GVGSVEQVDILPRYFKQIRD--DIAMAKPM---- 173
Query: 286 DFRFVFDAMHAVTGAYAKPIFVEKLGAKPDSILNGVPLEDFGHGHPDP----NLTYARDL 341
+ V D + V G A P +E LG + V +F + HPDP NL +DL
Sbjct: 174 --KVVVDCGNGVAGVIA-PQLIEALGCSVIPLYCEVD-GNFPNHHPDPGKPENL---KDL 226
Query: 342 VAIMYGENGPDFGAASDGDGDR-NMILGKGFFVTPSDSVAIIAAN 385
+A + EN D G A DGDGDR ++ G + P + + A +
Sbjct: 227 IAKVKAENA-DLGLAFDGDGDRVGVVTNTGTIIYPDRLLMLFAKD 270
>pdb|2FKM|X Chain X, Pmm/pgm S108d Mutant With Alpha-d-glucose 1,6-bisphosphate
Bound
Length = 462
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 97/225 (43%), Gaps = 44/225 (19%)
Query: 168 GIMSTPAVSAVIRKQKANGGFIMSASHNPGGPEYDWGIKFNYSSGQPAPESITDKIYGNT 227
G++ TP + + G +++ HNP P+Y+ G K + G T
Sbjct: 82 GMVPTPVLYYAANVLEGKSGVMLTGDHNP--PDYN-GFKI--------------VVAGET 124
Query: 228 LSISEIKM--ADIPDVDLSSLGVTNFGNFSVEVVDPVSDYLELMENVFDFPLIRSLLSRS 285
L+ +I+ I DL+S G SVE VD + Y + + + D + + +
Sbjct: 125 LANEQIQALRERIEKNDLAS------GVGSVEQVDILPRYFKQIRD--DIAMAKPM---- 172
Query: 286 DFRFVFDAMHAVTGAYAKPIFVEKLGAKPDSILNGVPLEDFGHGHPDP----NLTYARDL 341
+ V D + V G A P +E LG + V +F + HPDP NL +DL
Sbjct: 173 --KVVVDCGNGVAGVIA-PQLIEALGCSVIPLYCEVD-GNFPNHHPDPGKPENL---KDL 225
Query: 342 VAIMYGENGPDFGAASDGDGDR-NMILGKGFFVTPSDSVAIIAAN 385
+A + EN D G A DGDGDR ++ G + P + + A +
Sbjct: 226 IAKVKAENA-DLGLAFDGDGDRVGVVTNTGTIIYPDRLLMLFAKD 269
>pdb|3BKQ|X Chain X, Structure Of The P368g Mutant Of PmmPGM IN COMPLEX WITH
ITS SUBSTRATE
pdb|3C04|A Chain A, Structure Of The P368g Mutant Of PmmPGM FROM P. AERUGINOSA
Length = 463
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 97/225 (43%), Gaps = 44/225 (19%)
Query: 168 GIMSTPAVSAVIRKQKANGGFIMSASHNPGGPEYDWGIKFNYSSGQPAPESITDKIYGNT 227
G++ TP + + G +++ HNP P+Y+ G K + G T
Sbjct: 83 GMVPTPVLYYAANVLEGKSGVMLTGXHNP--PDYN-GFKI--------------VVAGET 125
Query: 228 LSISEIKM--ADIPDVDLSSLGVTNFGNFSVEVVDPVSDYLELMENVFDFPLIRSLLSRS 285
L+ +I+ I DL+S G SVE VD + Y + + + D + + +
Sbjct: 126 LANEQIQALRERIEKNDLAS------GVGSVEQVDILPRYFKQIRD--DIAMAKPM---- 173
Query: 286 DFRFVFDAMHAVTGAYAKPIFVEKLGAKPDSILNGVPLEDFGHGHPDP----NLTYARDL 341
+ V D + V G A P +E LG + V +F + HPDP NL +DL
Sbjct: 174 --KVVVDCGNGVAGVIA-PQLIEALGCSVIPLYCEVD-GNFPNHHPDPGKPENL---KDL 226
Query: 342 VAIMYGENGPDFGAASDGDGDR-NMILGKGFFVTPSDSVAIIAAN 385
+A + EN D G A DGDGDR ++ G + P + + A +
Sbjct: 227 IAKVKAENA-DLGLAFDGDGDRVGVVTNTGTIIYPDRLLMLFAKD 270
>pdb|2H4L|X Chain X, Complex Of PmmPGM WITH RIBOSE 1-Phosphate
pdb|2H5A|X Chain X, Complex Of The Enzyme PmmPGM WITH XYLOSE 1-Phosphate
Length = 463
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 97/225 (43%), Gaps = 44/225 (19%)
Query: 168 GIMSTPAVSAVIRKQKANGGFIMSASHNPGGPEYDWGIKFNYSSGQPAPESITDKIYGNT 227
G++ TP + + G +++ HNP P+Y+ G K + G T
Sbjct: 83 GMVPTPVLYYAANVLEGKSGVMLTGXHNP--PDYN-GFKI--------------VVAGET 125
Query: 228 LSISEIKM--ADIPDVDLSSLGVTNFGNFSVEVVDPVSDYLELMENVFDFPLIRSLLSRS 285
L+ +I+ I DL+S G SVE VD + Y + + + D + + +
Sbjct: 126 LANEQIQALRERIEKNDLAS------GVGSVEQVDILPRYFKQIRD--DIAMAKPM---- 173
Query: 286 DFRFVFDAMHAVTGAYAKPIFVEKLGAKPDSILNGVPLEDFGHGHPDP----NLTYARDL 341
+ V D + V G A P +E LG + V +F + HPDP NL +DL
Sbjct: 174 --KVVVDCGNGVAGVIA-PQLIEALGCSVIPLYCEVD-GNFPNHHPDPGKPENL---KDL 226
Query: 342 VAIMYGENGPDFGAASDGDGDR-NMILGKGFFVTPSDSVAIIAAN 385
+A + EN D G A DGDGDR ++ G + P + + A +
Sbjct: 227 IAKVKAENA-DLGLAFDGDGDRVGVVTNTGTIIYPDRLLMLFAKD 270
>pdb|1K35|A Chain A, Crystal Structure Of Phosphomannomutase/phosphoglucomutase
From P.aeruginosa
Length = 463
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 94/226 (41%), Gaps = 46/226 (20%)
Query: 168 GIMSTPAVSAVIRKQKANGGFIMSASHNPGGPEYDWGIKFNYSSGQPAPESITDKIYGNT 227
G + TP + + G ++ HNP P+Y+ G K + G T
Sbjct: 83 GXVPTPVLYYAANVLEGKSGVXLTGXHNP--PDYN-GFKI--------------VVAGET 125
Query: 228 LSISEIKM--ADIPDVDLSSLGVTNFGNFSVEVVDPVSDYLELMENVFDFPLIRSLLSRS 285
L+ +I+ I DL+S G SVE VD + Y F IR ++ +
Sbjct: 126 LANEQIQALRERIEKNDLAS------GVGSVEQVDILPRY---------FKQIRDDIAXA 170
Query: 286 D-FRFVFDAMHAVTGAYAKPIFVEKLGAKPDSILNGVPLEDFGHGHPDP----NLTYARD 340
+ V D + V G A P +E LG + V +F + HPDP NL +D
Sbjct: 171 KPXKVVVDCGNGVAGVIA-PQLIEALGCSVIPLYCEVD-GNFPNHHPDPGKPENL---KD 225
Query: 341 LVAIMYGENGPDFGAASDGDGDR-NMILGKGFFVTPSDSVAIIAAN 385
L+A + EN D G A DGDGDR ++ G + P + + A +
Sbjct: 226 LIAKVKAENA-DLGLAFDGDGDRVGVVTNTGTIIYPDRLLXLFAKD 270
>pdb|2F7L|A Chain A, Crystal Structure Of Sulfolobus Tokodaii
PhosphomannomutasePHOSPHOGLUCOMUTASE
pdb|2F7L|B Chain B, Crystal Structure Of Sulfolobus Tokodaii
PhosphomannomutasePHOSPHOGLUCOMUTASE
Length = 455
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 89/204 (43%), Gaps = 29/204 (14%)
Query: 168 GIMSTPAVSAVIRKQKANGGFIMSASHNPGGPEYDWGIKFNYSSGQPAPESITDKIYGNT 227
G+ TPA+ ++ +GG +++ASHNP Y+ GIK + DK +
Sbjct: 72 GMAPTPALQYAVKTLGYDGGVVITASHNPA--PYN-GIK------------VVDK---DG 113
Query: 228 LSISEIKMADIPDVDLSS-LGVTNFGNFSVEVVDP---VSDYLELMENVFDFPLIRSLLS 283
+ I K +I D+ + + + + EV +S Y+ + + D I+
Sbjct: 114 IEIRREKENEIEDLFFTERFNTIEWSSLTTEVKREDRVISTYVNGILSHVDIEKIK---- 169
Query: 284 RSDFRFVFDAMHAVTGAYAKPIFVEKLGAKPDSILNGVPLEDFGHGHPDPNLTYARDLVA 343
+ +++ + D ++V GA + P+ LG K +I NG F P+P ++
Sbjct: 170 KKNYKVLIDPANSV-GALSTPLVARALGCKIYTI-NGNLDPLFSARQPEPTFDSLKETAE 227
Query: 344 IMYGENGPDFGAASDGDGDRNMIL 367
++ D G A DGD DR + +
Sbjct: 228 VVKTLK-VDLGVAHDGDADRAIFI 250
>pdb|3I3W|A Chain A, Structure Of A Phosphoglucosamine Mutase From Francisella
Tularensis
pdb|3I3W|B Chain B, Structure Of A Phosphoglucosamine Mutase From Francisella
Tularensis
Length = 443
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 66/320 (20%), Positives = 121/320 (37%), Gaps = 52/320 (16%)
Query: 168 GIMSTPAVSAVIRKQKANGGFIMSASHNPGGPEYDWGIKFNYSSG----QPAPESITDKI 223
G++ TP V+ K +A GF+++A HN D GIK S+G E + D I
Sbjct: 76 GVVPTPVVAFXTVKHRAAAGFVITAXHN---KFTDNGIKLFSSNGFKLDDALEEEVEDXI 132
Query: 224 YGNTLSISEIKMADIPDVDLSSLGVTNFGNFSVEVVDPVSDYLELMENVFDFPLIRSLLS 283
G+ + + K FG++ + + + + +Y+E + + F +
Sbjct: 133 DGDFIYQPQFK----------------FGSYKI-LANAIDEYIESIYSRF------AKFV 169
Query: 284 RSDFRFVFDAMHAVTGAYAKPIFVEKLGAKPDSILNGVPLEDFGHGHPDPNLTYARDLVA 343
+ V D H ++ ++K G SI + + G ++ + V
Sbjct: 170 NYKGKVVVDCAHG-AASHNFEALLDKFGINYVSIASNPDGLNINVGCGATCVSNIKKAVK 228
Query: 344 IMYGENGPDFGAASDGDGDRNMILGKGFFVTPSDSVAIIAANAQEAIPYFKSGPKGLARS 403
E D G + DGD DR +I+ + D + I A + G G+ +
Sbjct: 229 ----EQKADLGISLDGDADRIIIVDENGQEIDGDGILNILAQYSDIC----GGTNGIVGT 280
Query: 404 MPTSGALDRVAEKLKLPFFEVPTGWKFFGNLMDARKLSVCGEES-------FGTGSDHIR 456
T+ + + K+PF G ++ + + GE S FGT
Sbjct: 281 QXTNXSYENHYRANKIPFIRSKVGDRYVLEDLVKYGYKIGGESSGHVINLNFGTTG---- 336
Query: 457 EKDGIWAVLAWLSIVAHRNK 476
DG++ + L+I + +K
Sbjct: 337 --DGLFTAIQLLAIFSQADK 354
>pdb|3UW2|A Chain A, X-Ray Crystal Structure Of
PhosphoglucomutasePHOSPHOMANNOMUTASE Family Protein
(Bth_i1489)from Burkholderia Thailandensis
Length = 485
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 114/289 (39%), Gaps = 60/289 (20%)
Query: 181 KQKANGGFIMSASHNPGGPEYDWGIKFNYSSGQPAPESITDKIYGNTLSISEIKMADIPD 240
+++ + +++ SHNP P+Y+ G K IYG+ + ++ D
Sbjct: 118 ERRVDSCIVVTGSHNP--PDYN-GFKMVLRGA---------AIYGDQIQGLYKRIVD--- 162
Query: 241 VDLSSLGVTNFGNFSVEVVDPVSDYLELMENVFDFPLIRSLLSRSDFRFVFDAMHAVTGA 300
G+ S E D Y+E + V D L R L + V DA + V G
Sbjct: 163 ------ARFETGSGSYEQYDVADQYVERI--VGDIKLTRPL------KLVVDAGNGVAGP 208
Query: 301 YAKPIFVEKLGAKPDSILNGVPLEDFGHGHPDP----NLTYARDLVAIMYGENGPDFGAA 356
A +F + LG + + + +F + HPDP NL +D++A + + + G A
Sbjct: 209 LATRLF-KALGCELVELFTDID-GNFPNHHPDPAHPENL---QDVIAKLKATDA-EIGFA 262
Query: 357 SDGDGDRNMILGK-GFFVTPSDSVAIIAA-----NAQEAIPYFKSGPKGLARSMPTSGAL 410
DGDGDR ++ K G + P + + A N I Y + LAR + G
Sbjct: 263 FDGDGDRLGVVTKDGQIIYPDRQLMLFAEEVLSRNPGAQIIYDVKCTRNLARWVREKGG- 321
Query: 411 DRVAEKLKLPFFEVPTGWKFFGNLMDARKLSVCGEESFGTGSDHIREKD 459
P WK +L+ A KL G G S H+ KD
Sbjct: 322 -------------EPLMWKTGHSLVKA-KLRETGAPLAGEMSGHVFFKD 356
>pdb|3LG0|A Chain A, Structure Of Plasmodium Falciparum Ornithine
Delta-Aminotransferase
pdb|3LG0|B Chain B, Structure Of Plasmodium Falciparum Ornithine
Delta-Aminotransferase
pdb|3LG0|C Chain C, Structure Of Plasmodium Falciparum Ornithine
Delta-Aminotransferase
pdb|3LG0|D Chain D, Structure Of Plasmodium Falciparum Ornithine
Delta-Aminotransferase
pdb|3NTJ|A Chain A, Redox Regulation Of Plasmodium Falciparum Ornithine Delta-
Aminotransferase
pdb|3NTJ|B Chain B, Redox Regulation Of Plasmodium Falciparum Ornithine Delta-
Aminotransferase
pdb|3NTJ|C Chain C, Redox Regulation Of Plasmodium Falciparum Ornithine Delta-
Aminotransferase
pdb|3NTJ|D Chain D, Redox Regulation Of Plasmodium Falciparum Ornithine Delta-
Aminotransferase
Length = 422
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 5/82 (6%)
Query: 275 FPLIRSLLSRSDFRFVFDAMHAVTGAYAKPIFVEKLGAKPDSILNGVPLEDFGHGHPDPN 334
FP + SL + + FV D + G K + G KPD IL G L GH +
Sbjct: 216 FPGVASLCKKYNVLFVADEVQTGLGRTGKLLCTHHYGVKPDVILLGKALSG---GHYPIS 272
Query: 335 LTYARDLVAIMY--GENGPDFG 354
A D V ++ GE+G +G
Sbjct: 273 AILANDDVMLVLKPGEHGSTYG 294
>pdb|3CG1|A Chain A, Crystal Structure Of P. Furiosus Periplasmic Binding
Protein ModaWTPA WITH BOUND TUNGSTATE
pdb|3CG1|B Chain B, Crystal Structure Of P. Furiosus Periplasmic Binding
Protein ModaWTPA WITH BOUND TUNGSTATE
Length = 296
Score = 32.0 bits (71), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Query: 272 VFDFPLIRSLL--SRSDFRFVFDAMHAVTGAYAKPIFVEKLGAKPDSILNGVPLEDFGHG 329
V D+ LI LL + +DF +F V K +VE++ + PD + ED G
Sbjct: 66 VADYTLIPQLLIPNYTDFYVLFATNEIVIAFTDKSRYVEEMKSNPDKWYEILAREDVRFG 125
Query: 330 HPDPN 334
DPN
Sbjct: 126 FSDPN 130
>pdb|1CQK|A Chain A, Crystal Structure Of The Ch3 Domain From The Mak33
Antibody
pdb|1CQK|B Chain B, Crystal Structure Of The Ch3 Domain From The Mak33
Antibody
Length = 101
Score = 30.8 bits (68), Expect = 2.1, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 4/67 (5%)
Query: 76 PEGIKVNSVPTKPIEGQKTGTSGLRKKVKVFKQENYLANWIQALFNSLPPEDYKNGHLVL 135
P +V ++P P+E L + F E+ W +N P E+YKN ++
Sbjct: 1 PAAPQVYTIP-PPLEQMAKDLVSLTCMITDFFPEDITVEW---QWNGQPAENYKNTQPIM 56
Query: 136 GGDGRYF 142
DG YF
Sbjct: 57 DTDGSYF 63
>pdb|3DJA|A Chain A, Crystal Structure Of Cpaf Solved With Mad
pdb|3DJA|B Chain B, Crystal Structure Of Cpaf Solved With Mad
Length = 579
Score = 29.3 bits (64), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 53/117 (45%), Gaps = 9/117 (7%)
Query: 257 EVVDPVSDYLELMENVFDFPLIRSLLSRSDFRFVFDAMHAVTGAYAKPIFVEKLG--AKP 314
EVVD + D+L L+ENV R L + + D A Y K + L +K
Sbjct: 376 EVVDAL-DWLTLLENVDTNVESRLALGDNXEGYTVDLQVA---EYLKSFGRQVLNCWSKG 431
Query: 315 DSILNG-VPLEDFGHGHPDPNLTYARDLVAIMYGEN--GPDFGAASDGDGDRNMILG 368
D L+ +PL F HP P + Y++ + ++ ++ DF D DR +I+G
Sbjct: 432 DIELSTPIPLFGFEKIHPHPRVQYSKPICVLINEQDFSCADFFPVVLKDNDRALIVG 488
>pdb|4AMB|A Chain A, Crystal Structure Of The Glycosyltransferase Snogd From
Streptomyces Nogalater
pdb|4AMB|B Chain B, Crystal Structure Of The Glycosyltransferase Snogd From
Streptomyces Nogalater
Length = 400
Score = 29.3 bits (64), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 367 LGKGFFVTPSDSVAIIAANAQEAIPYFKSGPKGLARSMPTSGALDRVAEKLKLPFFEVPT 426
LG+GFF V+ +A + A+ +S L PT GA A L+LP E+P
Sbjct: 100 LGEGFFAEMFARVSAVAVDG--ALRTARSWRPDLVVHTPTQGAGPLTAAALQLPCVELPL 157
Query: 427 G 427
G
Sbjct: 158 G 158
>pdb|4AMG|A Chain A, Crystal Structure Of The Glycosyltransferase Snogd From
Streptomyces Nogalater
pdb|4AMG|B Chain B, Crystal Structure Of The Glycosyltransferase Snogd From
Streptomyces Nogalater
pdb|4AN4|A Chain A, Crystal Structure Of The Glycosyltransferase Snogd From
Streptomyces Nogalater
pdb|4AN4|B Chain B, Crystal Structure Of The Glycosyltransferase Snogd From
Streptomyces Nogalater
pdb|4AN4|C Chain C, Crystal Structure Of The Glycosyltransferase Snogd From
Streptomyces Nogalater
pdb|4AN4|D Chain D, Crystal Structure Of The Glycosyltransferase Snogd From
Streptomyces Nogalater
Length = 400
Score = 29.3 bits (64), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 367 LGKGFFVTPSDSVAIIAANAQEAIPYFKSGPKGLARSMPTSGALDRVAEKLKLPFFEVPT 426
LG+GFF V+ +A + A+ +S L PT GA A L+LP E+P
Sbjct: 100 LGEGFFAEMFARVSAVAVDG--ALRTARSWRPDLVVHTPTQGAGPLTAAALQLPCVELPL 157
Query: 427 G 427
G
Sbjct: 158 G 158
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.137 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,575,712
Number of Sequences: 62578
Number of extensions: 872349
Number of successful extensions: 1917
Number of sequences better than 100.0: 29
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 1861
Number of HSP's gapped (non-prelim): 33
length of query: 635
length of database: 14,973,337
effective HSP length: 105
effective length of query: 530
effective length of database: 8,402,647
effective search space: 4453402910
effective search space used: 4453402910
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)