Query 006678
Match_columns 635
No_of_seqs 186 out of 1521
Neff 7.0
Searched_HMMs 29240
Date Mon Mar 25 06:02:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006678.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006678hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3pmg_A Alpha-D-glucose-1,6-bis 100.0 3E-107 1E-111 918.1 40.5 541 80-635 2-561 (561)
2 1kfi_A Phosphoglucomutase 1; p 100.0 2E-100 6E-105 866.8 43.4 537 83-635 10-572 (572)
3 2f7l_A 455AA long hypothetical 100.0 1.7E-87 6E-92 741.8 46.4 433 92-597 3-439 (455)
4 1wqa_A Phospho-sugar mutase; a 100.0 6.2E-87 2.1E-91 737.4 43.8 432 92-597 3-437 (455)
5 1tuo_A Putative phosphomannomu 100.0 1.9E-86 6.6E-91 734.7 43.4 434 88-597 8-449 (464)
6 3na5_A Phosphoglucomutase; iso 100.0 4.9E-86 1.7E-90 746.0 44.2 496 78-618 40-568 (570)
7 1p5d_X PMM, phosphomannomutase 100.0 7.5E-84 2.6E-88 714.3 42.3 441 89-616 9-455 (463)
8 3uw2_A Phosphoglucomutase/phos 100.0 1.1E-83 3.7E-88 714.1 39.8 445 87-617 21-478 (485)
9 2z0f_A Putative phosphoglucomu 100.0 2.9E-83 9.9E-88 719.8 42.1 483 86-615 18-521 (524)
10 3pdk_A Phosphoglucosamine muta 100.0 2.4E-81 8.2E-86 693.5 38.3 442 85-616 17-465 (469)
11 3i3w_A Phosphoglucosamine muta 100.0 1.5E-80 5.1E-85 683.3 33.3 429 91-615 2-440 (443)
12 4hjh_A Phosphomannomutase; str 100.0 7.8E-79 2.7E-83 676.7 39.7 443 89-615 7-473 (481)
13 2dka_A Phosphoacetylglucosamin 100.0 8.3E-58 2.9E-62 514.5 15.9 398 89-597 19-530 (544)
14 1wjw_A Phosphoacetylglucosamin 99.0 1.3E-11 4.4E-16 109.9 -4.1 38 556-597 43-80 (112)
15 2dka_A Phosphoacetylglucosamin 96.9 0.00091 3.1E-08 74.9 5.9 52 130-184 132-184 (544)
16 1o1x_A Ribose-5-phosphate isom 75.2 7.3 0.00025 35.8 7.3 33 131-165 13-45 (155)
17 2vvp_A Ribose-5-phosphate isom 71.1 8.6 0.00029 35.7 6.8 32 132-165 5-36 (162)
18 2vvr_A Ribose-5-phosphate isom 70.9 7.4 0.00025 35.6 6.3 31 132-164 3-33 (149)
19 3he8_A Ribose-5-phosphate isom 64.3 20 0.00068 32.7 7.7 32 132-165 2-33 (149)
20 3s5p_A Ribose 5-phosphate isom 61.3 17 0.00059 33.7 6.8 32 131-164 22-53 (166)
21 3ph3_A Ribose-5-phosphate isom 60.0 26 0.00087 32.7 7.7 33 131-165 21-53 (169)
22 2ppw_A Conserved domain protei 44.7 28 0.00095 33.7 5.5 34 131-164 4-39 (216)
23 3ph3_A Ribose-5-phosphate isom 39.0 59 0.002 30.2 6.6 66 285-361 19-88 (169)
24 3k7p_A Ribose 5-phosphate isom 38.9 45 0.0015 31.3 5.8 32 132-165 24-57 (179)
25 2vvr_A Ribose-5-phosphate isom 38.1 57 0.0019 29.7 6.2 64 287-361 2-69 (149)
26 4em8_A Ribose 5-phosphate isom 36.7 42 0.0014 30.5 5.1 31 132-164 9-39 (148)
27 3he8_A Ribose-5-phosphate isom 36.7 70 0.0024 29.1 6.6 63 288-361 2-68 (149)
28 2i2x_B MTAC, methyltransferase 35.0 1.9E+02 0.0066 28.2 10.2 61 130-196 123-186 (258)
29 3s5p_A Ribose 5-phosphate isom 34.6 77 0.0026 29.3 6.5 66 285-361 20-89 (166)
30 1y80_A Predicted cobalamin bin 34.2 1E+02 0.0035 28.9 7.8 59 130-194 88-149 (210)
31 3ezx_A MMCP 1, monomethylamine 33.9 1.8E+02 0.006 27.7 9.4 55 130-190 92-149 (215)
32 3sgw_A Ribose 5-phosphate isom 33.6 82 0.0028 29.6 6.6 32 131-164 30-63 (184)
33 3fni_A Putative diflavin flavo 33.1 1.3E+02 0.0046 26.9 8.1 34 131-164 5-39 (159)
34 1ccw_A Protein (glutamate muta 32.5 61 0.0021 28.6 5.5 58 131-194 4-64 (137)
35 2ppw_A Conserved domain protei 31.4 75 0.0026 30.7 6.2 65 286-361 3-78 (216)
36 3ono_A Ribose/galactose isomer 29.8 66 0.0022 31.1 5.4 31 132-165 5-40 (214)
37 4dik_A Flavoprotein; TM0755, e 28.9 1.8E+02 0.0062 30.6 9.3 61 129-190 264-325 (410)
38 2jpi_A Hypothetical protein; a 27.1 1.7E+02 0.0057 25.4 7.1 80 513-633 32-111 (118)
39 3k7p_A Ribose 5-phosphate isom 26.3 1.3E+02 0.0044 28.2 6.6 65 286-361 22-92 (179)
40 2yxb_A Coenzyme B12-dependent 26.0 94 0.0032 28.2 5.7 58 130-193 18-78 (161)
41 3c5y_A Ribose/galactose isomer 25.6 69 0.0024 31.2 4.7 32 133-164 24-55 (231)
42 2ehp_A AQ_1627 protein; putati 23.2 3.4E+02 0.012 22.9 9.7 112 98-247 10-122 (126)
43 1o1x_A Ribose-5-phosphate isom 23.2 1.4E+02 0.0048 27.3 6.1 67 285-362 11-81 (155)
44 3hly_A Flavodoxin-like domain; 22.6 2.1E+02 0.0071 25.5 7.3 32 133-164 3-35 (161)
45 2vvp_A Ribose-5-phosphate isom 20.5 1.5E+02 0.005 27.3 5.7 64 287-361 4-72 (162)
No 1
>3pmg_A Alpha-D-glucose-1,6-bisphosphate; phosphoglucomutase, phosphotransferase; HET: SEP; 2.40A {Oryctolagus cuniculus} SCOP: c.84.1.1 c.84.1.1 c.84.1.1 d.129.2.1 PDB: 1c4g_A* 1jdy_A* 1lxt_A 1vkl_A* 1c47_A*
Probab=100.00 E-value=2.9e-107 Score=918.12 Aligned_cols=541 Identities=59% Similarity=0.977 Sum_probs=464.8
Q ss_pred cccccCCCCCCCCcCccCCeeEEcccc-----ccHHHHHHHHHHHHHhCCCCCCCCCeEEEEecCCcCHHHHHHHHHHHH
Q 006678 80 KVNSVPTKPIEGQKTGTSGLRKKVKVF-----KQENYLANWIQALFNSLPPEDYKNGHLVLGGDGRYFNKEAAQIIIKIA 154 (635)
Q Consensus 80 ~~~~i~~~~~~~~~FGt~GiRG~~~v~-----~tp~~~~~~~~A~g~~l~~~~~~~~~VvVG~D~R~sS~~la~a~a~gL 154 (635)
+++.+.+.++..++|||+||||++|++ +||+|+.++++|++..+. ++.+|+||||+|++|++++++++++|
T Consensus 2 ~~~~~~~~~~~~~~fGTsGiRG~v~~~~~~~~~t~~f~~~l~~A~g~~~~----~g~~VvVG~D~R~~s~~~~~~~a~~l 77 (561)
T 3pmg_A 2 KIVTVKTKAYPDQKPGTSGLRKRVKVFQSSTNYAENFIQSIISTVEPAQR----QEATLVVGGDGRFYMKEAIQLIVRIA 77 (561)
T ss_dssp CCEEEECCCCSCCCCBTTBEEEEHHHHHHSTTHHHHHHHHHHHTSCGGGT----TTCEEEEEECCCTTHHHHHHHHHHHH
T ss_pred cceEEecccCCCCCCCCCCcCeeeCCCCCCcCccHHHHHHHHHHHHhhhc----CCCEEEEEeCCCccHHHHHHHHHHHH
Confidence 467889999999999999999999984 455555555555544333 56789999999999999999999999
Q ss_pred HhCCCeEEEECCCCccchHHHHHHHHhccccceeEEeccCCCCCCCCCceEEEEcCCCCCCChhHHHHHHhccccchhhh
Q 006678 155 AGNGVGKIMVGRDGIMSTPAVSAVIRKQKANGGFIMSASHNPGGPEYDWGIKFNYSSGQPAPESITDKIYGNTLSISEIK 234 (635)
Q Consensus 155 ~s~Gv~V~~~~~~G~~pTP~v~fav~~~~a~gGI~ITASHNP~~~~~~nGiK~~~~~G~~l~~~~~~~Ie~~~~~ie~~~ 234 (635)
+++|++|++++++|++|||+++|++++++++|||||||||||+++++||||||++++|.+++++++++|++.++++++|.
T Consensus 78 ~a~Gv~V~~~~~~g~~pTP~vs~av~~~~a~gGImITASHNP~~~~~~nGiK~~~~~G~~~~~~~~~~Ie~~~~~i~~~~ 157 (561)
T 3pmg_A 78 AANGIGRLVIGQNGILSTPAVSCIIRKIKAIGGIILTASHNPGGPNGDFGIKFNISNGGPAPEAITDKIFQISKTIEEYA 157 (561)
T ss_dssp HHTTCCEEEEEEEEECCHHHHHHHHHHHTCSEEEEECCTTSCCSTTSEEEEEEEETTSSBCCHHHHHHHHHHHHHCCEEE
T ss_pred HHCCCEEEEecCCCccCHHHHHHHHHHhcCCeEEEEEeCCCCCCCCCcceEEEEeCCCCcCCHHHHHHHHHHHHhhhhhc
Confidence 99999999996568999999999999999999999999999977778999999999999999999999999887655553
Q ss_pred ccCCCCCCccccccccc------CCceeeecCchHHHHHHHHhhcCchhhhhhhc-CCCcEEEEecCCCchhhchhHHHH
Q 006678 235 MADIPDVDLSSLGVTNF------GNFSVEVVDPVSDYLELMENVFDFPLIRSLLS-RSDFRFVFDAMHAVTGAYAKPIFV 307 (635)
Q Consensus 235 ~~~~~~~~~~~ig~~~~------g~~~~~~~d~~~~Yi~~l~~~~~~~~I~~~~~-~~~~kVvvD~~~Gaa~~~~~~lfl 307 (635)
.....+.+++++|...+ +...++..|..+.|++.+++.++.+.|++++. .+++|||+||+||+++.+++++|+
T Consensus 158 ~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~d~~~~Yi~~l~~~~d~~~i~~~~~~~~~lkIvvD~~~Ga~~~~~~~il~ 237 (561)
T 3pmg_A 158 ICPDLKVDLGVLGKQQFDLENKFKPFTVEIVDSVEAYATMLRNIFDFNALKELLSGPNRLKIRIDAMHGVVGPYVKKILC 237 (561)
T ss_dssp ECTTCCCCTTSCEEEEECCTTCSSCEEEEEECSSHHHHHHHHTTSCHHHHHHHHHSTTCCCEEEECTTSTTHHHHHHHHT
T ss_pred cccccccchhhhccccccccccccCCceEecChHHHHHHHHHHhcChHHhhhhhccCCCcEEEEECCCCchHHHHHHHHH
Confidence 21111334444442110 11234566888999999999999988875322 258999999999999999999844
Q ss_pred HHcCCceeEeeccccCCCCCCCCCCCCchhHHHHHHHHHhccCCcEEEEecCCCCeEEEEe-CCEEeCCCCHHHHHHHHH
Q 006678 308 EKLGAKPDSILNGVPLEDFGHGHPDPNLTYARDLVAIMYGENGPDFGAASDGDGDRNMILG-KGFFVTPSDSVAIIAANA 386 (635)
Q Consensus 308 ~~LG~~~~~~ln~~pd~~Fp~~~P~P~~~~l~~L~~~va~~~~adlGia~DgDgDRl~vvd-~G~~l~~~d~lalla~~l 386 (635)
++|||+++.++|+.||++||+++|||+.+++.+|.+.| ++.++|+|+++||||||+++++ +|+++++++.+++++.|+
T Consensus 238 ~~lG~~v~~~v~~~pd~~F~~~~P~P~~~~~~~L~~~v-~~~~aDlgia~DgDaDR~~ivd~~G~~v~~~~~lalla~~l 316 (561)
T 3pmg_A 238 EELGAPANSAVNCVPLEDFGGHHPDPNLTYAADLVETM-KSGEHDFGAAFDGDGDRNMILGKHGFFVNPSDSVAVIAANI 316 (561)
T ss_dssp TTTCCCGGGEESCSCCTTGGGSCCCCSTTTTHHHHHHH-HTSCCSEEEEECTTSSCEEEEEGGGCBCCHHHHHHHHHHTG
T ss_pred HHcCCCeEEEECCEECCCCCCCCCCCChHHHHHHHHHH-HhcCCCEEEEEcCCCCeEEEEeCCCcEECccHHHHHHHHHH
Confidence 89999975458999999999999999999999999999 8999999999999999999996 689999666668888876
Q ss_pred HHhCCcC-CCCCCeEEEeccChHHHHHHHHHCCCCeEEeecchHHHHHHHHhcCceEEEeccCCCCCCCccCCchHHHHH
Q 006678 387 QEAIPYF-KSGPKGLARSMPTSGALDRVAEKLKLPFFEVPTGWKFFGNLMDARKLSVCGEESFGTGSDHIREKDGIWAVL 465 (635)
Q Consensus 387 l~~~~~~-~~g~~~Vv~~v~ts~~ld~ia~~~G~~v~~t~vG~k~i~~~m~~~~~~~ggEesgg~~~~~~~~~Dgi~a~l 465 (635)
+. .+++ ..+..+||+|++||.+++++|+++|++++||+||||||+++|.+.+++||||||||++++|++++||+++++
T Consensus 317 ~~-~~~~~~~~~~~vv~tv~Ss~~ld~va~~~G~~v~~t~vG~k~i~~~m~~~~~~~gGEeS~G~~~~~~~~kDGi~aal 395 (561)
T 3pmg_A 317 FS-IPYFQQTGVRGFARSMPTSGALDRVANATKIALYETPTGWKFFGNLMDASKLSLCGEESFGTGSDHIREKDGLWAVL 395 (561)
T ss_dssp GG-SHHHHHHCCCCEEEETTSCTHHHHHHHTSSSCEEEECSSHHHHHHHHHTTCCSEEEETTTEEEETTSSSCCHHHHHH
T ss_pred Hh-hhhhHhcCCCeEEEEechHHHHHHHHHHcCCCEEEEeccHHHHHHHhccCCeEEEEEecCCcCCCeeecCCHHHHHH
Confidence 31 0111 122235999999999999999999999999999999999999999999999999998899999999999999
Q ss_pred HHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhhCcceeeecccccCChHHHHHHHHHHHhhccccccCCcCCC-----ce
Q 006678 466 AWLSIVAHRNKDKKPGEKLISVSDVVKAHWATYGRNFFSRYDYEECESEGANKMIGYLRDLVSKSKAGDKYGN-----YV 540 (635)
Q Consensus 466 ~lle~la~~~~~~~~~~~~~tL~ell~~l~~~~g~~~~~r~~~~~~~~~~~~~vm~~l~~~~~~~~~~~~~~~-----~~ 540 (635)
+||++++..++ +|+|++++||++||++|+.|.+++.|+|+.++++|++|++....+...|+.+. ++
T Consensus 396 ~~le~la~~g~---------~lsell~~l~~~yG~~~~~r~d~~~~~~~~~~~vm~~L~~~~~~~~~~g~~~~~~~~~~~ 466 (561)
T 3pmg_A 396 AWLSILATRKQ---------SVEDILKDHWHKFGRNFFTRYDYEEVEAEGATKMMKDLEALMFDRSFVGKQFSANDKVYT 466 (561)
T ss_dssp HHHHHHHHHCS---------CHHHHHHHHHHHHCEEEEEEEEEEEECHHHHHHHHHHHHHHHHSTTSTTCEEEETTEEEE
T ss_pred HHHHHHHHhCC---------CHHHHHHHHHHHhCcccccccccccCCHHHHHHHHHHHHhcCCcccccccccccccccce
Confidence 99999998877 99999999999999999999999889999999999999887533344443221 67
Q ss_pred eeecccCccCCCCCCCCCCcCeEEEEEcCCeEEEEEeCCCCCCCCEEEEEEEeeCcChhhhHHHHHHHHHHHHHHHHhhc
Q 006678 541 LQFADDFAYTDPVDGSVASKQGVRFVFTDGSRIIFRLSGTGSAGATVRIYIEQFEPDVSKHEMDAQSALKPLIDLALSVS 620 (635)
Q Consensus 541 i~~~~~~~~~d~v~~~i~~~dGiki~f~dGswvliRpSgTEP~~~~iriY~Ea~~~~~~~~~~~~~~~l~~~i~~~~~~~ 620 (635)
|+..++|.|.||+|++++.+||+|+.|+||+|++||||||||+||++|+|+|+.+.+..++.+++|+.|+++|+.|++++
T Consensus 467 v~~~~~f~~~dpvd~~v~~~dGvri~~~dgswvlvRpSGte~~~P~lRvY~Ea~~~~~~~~~~~~~~~~~~~~~~~~~~~ 546 (561)
T 3pmg_A 467 VEKADNFEYHDPVDGSVSKNQGLRLIFADGSRIIFRLSGTGSAGATIRLYIDSYEKDNAKINQDPQVMLAPLISIALKVS 546 (561)
T ss_dssp EEEEEECCEECTTTCCEECCCCEEEEETTSCEEEEEEEECSSSCEEEEEEEEEEECCTTTTTSCHHHHHHHHHHHHHHHH
T ss_pred eeecccccccCcccCccccCceEEEEeCCCCEEEEecCCCCCCCceEEEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88889999999999999999999999999999999999999777799999999999888899999999999999999999
Q ss_pred CcccccCCCCCccCC
Q 006678 621 KLRDFTGREKPTVIT 635 (635)
Q Consensus 621 ~~~~~~~~~~~~~~~ 635 (635)
+++++|||++|||||
T Consensus 547 ~~~~~~~~~~~~~~~ 561 (561)
T 3pmg_A 547 QLQERTGRTAPTVIT 561 (561)
T ss_dssp THHHHHCCSSCSEEC
T ss_pred hHHHHhCCCCCCccC
Confidence 999999999999998
No 2
>1kfi_A Phosphoglucomutase 1; parafusin, phosphoprotein PP63, exocytosis, isomerase; 2.40A {Paramecium tetraurelia} SCOP: c.84.1.1 c.84.1.1 c.84.1.1 d.129.2.1 PDB: 1kfq_A
Probab=100.00 E-value=1.7e-100 Score=866.82 Aligned_cols=537 Identities=56% Similarity=0.934 Sum_probs=457.2
Q ss_pred ccCCCCCCCCcCccCCeeEEccccccHHHHHHHHHHHHHhCCCCCCCCC-eEEEEecCCcCHHHHHHHHHHHHHhCCCeE
Q 006678 83 SVPTKPIEGQKTGTSGLRKKVKVFKQENYLANWIQALFNSLPPEDYKNG-HLVLGGDGRYFNKEAAQIIIKIAAGNGVGK 161 (635)
Q Consensus 83 ~i~~~~~~~~~FGt~GiRG~~~v~~tp~~~~~~~~A~g~~l~~~~~~~~-~VvVG~D~R~sS~~la~a~a~gL~s~Gv~V 161 (635)
...+.++++++|||+||||+++++++++++.++++|++.++.+...+++ +|+||||+|++|++|+++++++|+++|++|
T Consensus 10 ~~~~~~~~~~~FGT~GiRG~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~VvIG~D~R~sS~~~a~~~a~~l~a~Gi~V 89 (572)
T 1kfi_A 10 VQVTQPYAGQKPGTSGLRKKVSEATQPNYLENFVQSIFNTLRKDELKPKNVLFVGGDGRYFNRQAIFSIIRLAYANDISE 89 (572)
T ss_dssp EEECCCCTTCCCBTTBEEEEHHHHTSTTHHHHHHHHHHHHSCGGGSSSSCEEEEEECCCTTHHHHHHHHHHHHHHTTCSE
T ss_pred cccCCcCccCCccCCccceEecceecHHHHHHHHHHHHHHHhhhccCCCCEEEEEecCCCCHHHHHHHHHHHHHHCCCEE
Confidence 3456678899999999999999999999999999999999973222345 899999999999999999999999999999
Q ss_pred EEECCCCccchHHHHHHHHhc-----cccceeEEeccCCCCCCC-CCceEEEEcCCCCCCChhHHHHHHhccccchhhhc
Q 006678 162 IMVGRDGIMSTPAVSAVIRKQ-----KANGGFIMSASHNPGGPE-YDWGIKFNYSSGQPAPESITDKIYGNTLSISEIKM 235 (635)
Q Consensus 162 ~~~~~~G~~pTP~v~fav~~~-----~a~gGI~ITASHNP~~~~-~~nGiK~~~~~G~~l~~~~~~~Ie~~~~~ie~~~~ 235 (635)
+++.+.|++|||+++|+++++ +|+|||||||||||++|. +||||||++++|.+++++++++|++.+++++++..
T Consensus 90 ~~~~~~G~~pTP~l~fav~~~n~~~~~a~~GImITASHNP~~~~~~~NGiK~~~~~G~~~~~~~~~~Ie~~~~~~~~~~~ 169 (572)
T 1kfi_A 90 VHVGQAGLMSTPASSHYIRKVNEEVGNCIGGIILTASHNPGGKEHGDFGIKFNVRTGAPAPEDFTDQIYTHTTKIKEYLT 169 (572)
T ss_dssp EEEEGGGCBCHHHHHHHHHHHHHHSCCEEEEEEECCTTSCCSTTTCEEEEEEECTTSSBCCHHHHHHHHHHHTTCCEEEE
T ss_pred EEecCCCCCChHHHHHHHHHhccccCCcceEEEEeCCCCCCCcCcccCcEEEecCCCCcCCHHHHHHHHHHHHhhhcccc
Confidence 999655899999999999999 999999999999994332 59999999999999999999999998866544432
Q ss_pred cCCC---CCCcccccccccCC-------ceeeecCchHHHHHHHHhhcCchhhhhhhcCCCcEEEEecCCCchhhchhHH
Q 006678 236 ADIP---DVDLSSLGVTNFGN-------FSVEVVDPVSDYLELMENVFDFPLIRSLLSRSDFRFVFDAMHAVTGAYAKPI 305 (635)
Q Consensus 236 ~~~~---~~~~~~ig~~~~g~-------~~~~~~d~~~~Yi~~l~~~~~~~~I~~~~~~~~~kVvvD~~~Gaa~~~~~~l 305 (635)
.+.. +.+++.++....+. +.+...|..+.|++++++.++.+.|++.+..+++||||||+||+++.+++++
T Consensus 170 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~Yi~~l~~~~~~~~i~~~l~~~~lkIvvd~~nG~~~~~~~~i 249 (572)
T 1kfi_A 170 VDYEFEKHINLDQIGVYKFEGTRLEKSHFEVKVVDTVQDYTQLMQKLFDFDLLKGLFSNKDFSFRFDGMHGVAGPYAKHI 249 (572)
T ss_dssp CCCCGGGTCCTTSCEEEEEEBCCTTCCEEEEEEECSSHHHHHHHHHHSCHHHHHHHHTCTTCCEEEECTTSTHHHHHHHH
T ss_pred cccccccccChhhccccccccccccccccceeecCcHHHHHHHHHHhcCHHHHhhhcccCCCEEEEeCCCcchHHHHHHH
Confidence 1111 22333332110011 1244568889999999999987777643333689999999999999999999
Q ss_pred HHH-HcCCc-eeEeeccccCCCCCCCCCCCCchhHHHHHHHHH------hccCCcEEEEecCCCCeEEEEeCCEEeCCCC
Q 006678 306 FVE-KLGAK-PDSILNGVPLEDFGHGHPDPNLTYARDLVAIMY------GENGPDFGAASDGDGDRNMILGKGFFVTPSD 377 (635)
Q Consensus 306 fl~-~LG~~-~~~~ln~~pd~~Fp~~~P~P~~~~l~~L~~~va------~~~~adlGia~DgDgDRl~vvd~G~~l~~~d 377 (635)
| + +|||+ ++ .+|++||++||+++|+|+.+++.+|...|+ ++.++|+|+++||||||++++++|+++++++
T Consensus 250 l-~~~lG~~~v~-~l~~~pD~~Fp~~~p~P~~~~~~~L~~~v~~~~~~a~~~~aDlgiA~DgDaDR~~vvd~G~~v~~~~ 327 (572)
T 1kfi_A 250 F-GTLLGCSKES-LLNCDPSEDFGGGHPDPNLTYAHDLVELLDIHKKKDVGTVPQFGAACDGDADRNMILGRQFFVTPSD 327 (572)
T ss_dssp H-TTTTCCCGGG-EESCSCCTTGGGSCCCCSTTTTHHHHHHTTTTCCSCGGGSCSEEEEECTTSCBEEEEETTEEECHHH
T ss_pred H-HHhCCCCeEE-EEecccCCCCCCCCCCCCchhHHHHHHHHhhhhccccccCCCeEEeeCCCCceeEEeeCCeEecccH
Confidence 5 8 99996 76 589999999999999999888999998884 7899999999999999999999999999666
Q ss_pred HHHHHHHHHHHhCCcCCCCCCeEEEeccChHHHHHHHHHCCCCeEEeecchHHHHHHHHhcCceEEEeccCCCCCCCccC
Q 006678 378 SVAIIAANAQEAIPYFKSGPKGLARSMPTSGALDRVAEKLKLPFFEVPTGWKFFGNLMDARKLSVCGEESFGTGSDHIRE 457 (635)
Q Consensus 378 ~lalla~~ll~~~~~~~~g~~~Vv~~v~ts~~ld~ia~~~G~~v~~t~vG~k~i~~~m~~~~~~~ggEesgg~~~~~~~~ 457 (635)
.+++|+.+++... +++...||++++||.+++++|+++|++++||+||||||.++|++.+++||||||||++++|+++
T Consensus 328 ~l~ll~~~~l~~~---~~g~~~Vv~~~~ss~~l~~ia~~~G~~~~~t~tG~k~i~~~m~~~~~~~ggEeSgg~~~~~~~~ 404 (572)
T 1kfi_A 328 SLAVIAANANLIF---KNGLLGAARSMPTSGALDKVAAKNGIKLFETPTGWKFFGNLMDAGLINLCGEESFGTGSNHIRE 404 (572)
T ss_dssp HHHHHHHTHHHHS---TTCCCCEEEETTSCTHHHHHHHHHTCCEEEECSSTHHHHHHHHTTSCSEEEETTTEEEETTSSS
T ss_pred hHHHHHHHHHHHh---cCCCcEEEEEeCchHHHHHHHHHcCCeEEEeCCcHHHHHHHHhcCCcEEEEeccCCccccccCC
Confidence 6788888886642 2233259999999999999999999999999999999999999999999999999988899999
Q ss_pred CchHHHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhhCcceeeecccccCChHHHHHHHHHHHhhccccccCCcCC
Q 006678 458 KDGIWAVLAWLSIVAHRNKDKKPGEKLISVSDVVKAHWATYGRNFFSRYDYEECESEGANKMIGYLRDLVSKSKAGDKYG 537 (635)
Q Consensus 458 ~Dgi~a~l~lle~la~~~~~~~~~~~~~tL~ell~~l~~~~g~~~~~r~~~~~~~~~~~~~vm~~l~~~~~~~~~~~~~~ 537 (635)
+||++++++||++++++++++ ..+++|+|++++||++||++++.+.+++.|+++.+.++|++|++... . .|
T Consensus 405 kDgi~a~l~~le~la~~~~~g---~~~~tL~ell~~l~~~yp~~~~~~~~~~~~~~~~~~~im~~l~~~~~--~-~g--- 475 (572)
T 1kfi_A 405 KDGIWAVLAWLTILAHKNKNT---DHFVTVEEIVTQYWQQFGRNYYSRYDYEQVDSAGANKMMEHLKTKFQ--Y-FE--- 475 (572)
T ss_dssp CCHHHHHHHHHHHHHHHTSSC---SSCCCHHHHHHHHHHHHCEEEEEEEEEEEECHHHHHHHHHHHHTTHH--H-HH---
T ss_pred CccHHHHHHHHHHHHHhcccc---CCCCCHHHHHHHHHHHcCceeEEeeeeecCCHHHHHHHHHHHHhhhh--h-hC---
Confidence 999999999999999987632 12359999999999999999998888877899899999999988632 1 22
Q ss_pred C-ceeeecccCccCCCCCCCCCCcCeEEEEEcCCeEEEEEeCCCCCCCCEEEEEEEeeCcChhhhHHHHHHHHHHHHHHH
Q 006678 538 N-YVLQFADDFAYTDPVDGSVASKQGVRFVFTDGSRIIFRLSGTGSAGATVRIYIEQFEPDVSKHEMDAQSALKPLIDLA 616 (635)
Q Consensus 538 ~-~~i~~~~~~~~~d~v~~~i~~~dGiki~f~dGswvliRpSgTEP~~~~iriY~Ea~~~~~~~~~~~~~~~l~~~i~~~ 616 (635)
+ .+|+.++||.+.+|++..++.+||||+.|+||+|++||||||||+||+||||+|+.+.+ +..+++++.|+++++.+
T Consensus 476 ~~~~v~~~~d~~~~~~~~~~i~~~dglr~~~~dg~wvlvRpSGTEP~~~~irvy~Ea~~~~--~~~~~~~~~~~~~~~~~ 553 (572)
T 1kfi_A 476 QLKQGNKADIYDYVDPVDQSVSKNQGVRFVFGDGSRIIFRLSGTGSVGATIRIYFEQFEQQ--QIQHETATALANIIKLG 553 (572)
T ss_dssp TTSTTCEEEECCEECTTTCCEECCCCEEEECTTSCEEEEEECSSCSSSEEEEEEEEEEESS--CCCSCHHHHHHHHHHHH
T ss_pred CceeEEEeecccccCcccCCCCCCCeEEEEECCCeEEEEECCCCCCCCceEEEEEEecCcc--hhHHHHHHHHHHHHHHH
Confidence 1 46777788887777777899999999999999999999999999999999999999876 33467888999999999
Q ss_pred HhhcCcccccCCCCCccCC
Q 006678 617 LSVSKLRDFTGREKPTVIT 635 (635)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~ 635 (635)
+++++|++||||++|||||
T Consensus 554 ~~~~~~~~~~~~~~~~~~~ 572 (572)
T 1kfi_A 554 LEISDIAQFTGRNEPTVIT 572 (572)
T ss_dssp HHHHCHHHHHCCSSCSEEC
T ss_pred HHHhChHHHhCCCCCcccC
Confidence 9999999999999999998
No 3
>2f7l_A 455AA long hypothetical phospho-sugar mutase; phosphomannomutase, phosphoglucomutase, isomerase; 2.80A {Sulfolobus tokodaii}
Probab=100.00 E-value=1.7e-87 Score=741.83 Aligned_cols=433 Identities=20% Similarity=0.243 Sum_probs=379.4
Q ss_pred CcCccCCeeEEccccccHHHHHHHHHHHHHhCCCCCCCCCeEEEEecCCcCHHHHHHHHHHHHHhCCCeEEEECCCCccc
Q 006678 92 QKTGTSGLRKKVKVFKQENYLANWIQALFNSLPPEDYKNGHLVLGGDGRYFNKEAAQIIIKIAAGNGVGKIMVGRDGIMS 171 (635)
Q Consensus 92 ~~FGt~GiRG~~~v~~tp~~~~~~~~A~g~~l~~~~~~~~~VvVG~D~R~sS~~la~a~a~gL~s~Gv~V~~~~~~G~~p 171 (635)
.+|||+||||+++.++|++++.++++|+|.++. ++++|+||||+|.+|++|+++++++|+++|++|+++ |++|
T Consensus 3 ~~Fgt~GiRG~~~~~lt~~~v~~~~~a~~~~l~----~~~~VvIG~D~R~ss~~~~~a~a~gl~~~G~~V~~~---g~~p 75 (455)
T 2f7l_A 3 KLFGTDGVRGIVNKELTPELVLKLSKAIGTFFG----KNSKILVGRDVRAGGDMLVKIVEGGLLSVGVEVYDG---GMAP 75 (455)
T ss_dssp SSCCSSSEEEEBTTTBCHHHHHHHHHHHHHHHC----TTCEEEEEECSCTTHHHHHHHHHHHHHHTTCEEEEE---EECC
T ss_pred CcccCCCeeeecCCCcCHHHHHHHHHHHHHHHc----cCCeEEEEECCCCCHHHHHHHHHHHHHHCCCcEEEc---CCCC
Confidence 589999999999999999999999999999997 346899999999999999999999999999999999 9999
Q ss_pred hHHHHHHHHhccccceeEEeccCCCCCCCCCceEEEEcCCCCCCChhHHHHHHhccccchhhhccCCCCCCccccccccc
Q 006678 172 TPAVSAVIRKQKANGGFIMSASHNPGGPEYDWGIKFNYSSGQPAPESITDKIYGNTLSISEIKMADIPDVDLSSLGVTNF 251 (635)
Q Consensus 172 TP~v~fav~~~~a~gGI~ITASHNP~~~~~~nGiK~~~~~G~~l~~~~~~~Ie~~~~~ie~~~~~~~~~~~~~~ig~~~~ 251 (635)
||+++|++++++++||||||||||| ++||||||++++|.+++++.+++|++.+++ ++ +++..++.+|.
T Consensus 76 TP~~~~av~~~~~~~GImITASHNP---~~~NGiK~~~~~G~~~~~~~~~~I~~~~~~-~~-----~~~~~~~~~g~--- 143 (455)
T 2f7l_A 76 TPALQYAVKTLGYDGGVVITASHNP---APYNGIKVVDKDGIEIRREKENEIEDLFFT-ER-----FNTIEWSSLTT--- 143 (455)
T ss_dssp HHHHHHHHHHHCCSEEEEECCTTSC---TTEEEEEEECTTSSBCCHHHHHHHHHHHHH-TC-----CCCCCGGGCCC---
T ss_pred cHHHHHHHHhcCCCeEEEEEcCCCC---hHHCEEEEECCCCCCCCHHHHHHHHHHHhc-CC-----CCcCchhcCCc---
Confidence 9999999999999999999999999 899999999999999999999999988754 22 23334433330
Q ss_pred CCceeeecCchHHHHHHHHhhcCchhhhhhhcCCCcEEEEecCCCchhhchhHHHHHHcCCceeEeeccccCCCCCCCCC
Q 006678 252 GNFSVEVVDPVSDYLELMENVFDFPLIRSLLSRSDFRFVFDAMHAVTGAYAKPIFVEKLGAKPDSILNGVPLEDFGHGHP 331 (635)
Q Consensus 252 g~~~~~~~d~~~~Yi~~l~~~~~~~~I~~~~~~~~~kVvvD~~~Gaa~~~~~~lfl~~LG~~~~~~ln~~pd~~Fp~~~P 331 (635)
. .....|..+.|++.+++.++.+.|+. +++|||+||+||+++.+++++| ++|||+++ .+|++|||+||+++|
T Consensus 144 -~-~~~~~~~~~~Y~~~l~~~~~~~~i~~----~~lkivvd~~~G~~~~~~~~~l-~~lG~~v~-~~~~~pDg~F~~~~p 215 (455)
T 2f7l_A 144 -E-VKREDRVISTYVNGILSHVDIEKIKK----KNYKVLIDPANSVGALSTPLVA-RALGCKIY-TINGNLDPLFSARQP 215 (455)
T ss_dssp -C-CEECCCHHHHHHHHHHTTSCHHHHHH----HCCEEEEECTTTGGGGTHHHHH-HHTTCEEE-EBSCSCCTTCTTSCS
T ss_pred -e-eecccchHHHHHHHHHhhcChhhccc----CCCEEEEECCCchHHHHHHHHH-HHcCCEEE-EECCcCCCCCCCCCc
Confidence 1 12345789999999999998766654 5899999999999999999995 99999876 599999999999999
Q ss_pred CCCchhHHHHHHHHHhccCCcEEEEecCCCCeEEEEe-CCEEeCCCCHH-HHHHHHHHHhCCcCCCCCCeEEEeccChHH
Q 006678 332 DPNLTYARDLVAIMYGENGPDFGAASDGDGDRNMILG-KGFFVTPSDSV-AIIAANAQEAIPYFKSGPKGLARSMPTSGA 409 (635)
Q Consensus 332 ~P~~~~l~~L~~~va~~~~adlGia~DgDgDRl~vvd-~G~~l~~~d~l-alla~~ll~~~~~~~~g~~~Vv~~v~ts~~ 409 (635)
||+.+++..+.+.+ ++.++|+|+++||||||++++| +|++++ +|++ +|++.|+++..+ .++ ..||.|++||.+
T Consensus 216 ~p~~~~l~~l~~~v-~~~~adlgia~DgDaDR~~~vd~~g~~l~-gd~i~~lla~~l~~~~~--~~~-~~vv~tv~ss~~ 290 (455)
T 2f7l_A 216 EPTFDSLKETAEVV-KTLKVDLGVAHDGDADRAIFIDSEGRVQW-GDRSGTLLSYWASVKNP--KAI-KKIVTAVSSSSL 290 (455)
T ss_dssp SCCTTTSHHHHHHH-HHTTCSEEEECCTTSCCCEEEETTSCBCC-HHHHHHHHHHHHHHTCT--TSC-SEEEEETTSCTH
T ss_pred CcchHHHHHHHHHH-HHcCCCEEEEECCCCCeEEEEcCCCeEEC-hHHHHHHHHHHHHHhCc--cCC-CeEEEEecccHH
Confidence 99988899999999 9999999999999999999886 789999 7777 677888876411 112 249999999999
Q ss_pred HHHHHHHCCCCeEEeecchHHHHHHHHhcCceEEEeccCCC-CCCCccCCchHHHHHHHHHHHHHhcCCCCCCCCCCCHH
Q 006678 410 LDRVAEKLKLPFFEVPTGWKFFGNLMDARKLSVCGEESFGT-GSDHIREKDGIWAVLAWLSIVAHRNKDKKPGEKLISVS 488 (635)
Q Consensus 410 ld~ia~~~G~~v~~t~vG~k~i~~~m~~~~~~~ggEesgg~-~~~~~~~~Dgi~a~l~lle~la~~~~~~~~~~~~~tL~ 488 (635)
++++|+++|+++++|+|||||++++|.+.++++|||||||+ +++|.+++||++++++++++++..++ +|+
T Consensus 291 l~~~a~~~g~~~~~t~~G~k~i~~~m~~~~~~~ggE~Sgg~~~~~~~~~~Dgi~a~l~~le~~a~~g~---------~L~ 361 (455)
T 2f7l_A 291 VEEYLSKYNIQVDWTKVGSVDIAHKVADENALAGFEENGGFMYPPHQYVRDGAMSFALMLELLANENV---------SSA 361 (455)
T ss_dssp HHHHHHTTTCEEEEECSCHHHHHHHHHHTTCSEEEETTEEEEBTTTBSSCCHHHHHHHHHHHHHHHTC---------CHH
T ss_pred HHHHHHHcCCEEEEEcCcHHHHHHHHHhcCcEEEEcCcCcEEECCcCCCCCHHHHHHHHHHHHHhhCC---------CHH
Confidence 99999999999999999999999999999999999999998 79999999999999999999998876 999
Q ss_pred HHHHHHHHhhCcceeeecccccCChHHHH-HHHHHHHhhccccccCCcCCCceeeecccCccCCCCCCCCCCcCeEEEEE
Q 006678 489 DVVKAHWATYGRNFFSRYDYEECESEGAN-KMIGYLRDLVSKSKAGDKYGNYVLQFADDFAYTDPVDGSVASKQGVRFVF 567 (635)
Q Consensus 489 ell~~l~~~~g~~~~~r~~~~~~~~~~~~-~vm~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~d~v~~~i~~~dGiki~f 567 (635)
|++ ++||++++.+.++ .|+++.+. ++|++|++..... + ..++.+||||+.|
T Consensus 362 ell----~~~~~~~~~~~~v-~~~~~~~~~~~~~~l~~~~~~~---~--------------------~~~~~~DGlr~~~ 413 (455)
T 2f7l_A 362 ELF----DRLPKYYLVKTKV-DLKPGLMVEEIYKKILEVYSTS---S--------------------VKAITIDGVKIIG 413 (455)
T ss_dssp HHH----HTSCCCEEEEEEE-ECCTTCCHHHHHHHHHHHHCCT---T--------------------SEEECSSSEEEEE
T ss_pred HHH----HhCCCCeeeeEeE-EcCcHHHHHHHHHHHHHhchhc---c--------------------cccccCceEEEEe
Confidence 998 4578888888888 58887666 8999998764210 1 2345678999999
Q ss_pred cCCeEEEEEeCCCCCCCCEEEEEEEeeCcC
Q 006678 568 TDGSRIIFRLSGTGSAGATVRIYIEQFEPD 597 (635)
Q Consensus 568 ~dGswvliRpSgTEP~~~~iriY~Ea~~~~ 597 (635)
+|| |++|||||||| +||+|+|+.+++
T Consensus 414 ~~g-w~lvRpSgTEP---~irvy~Ea~~~~ 439 (455)
T 2f7l_A 414 KDF-WFLVRKSGTEP---IIRIMAEAKDEN 439 (455)
T ss_dssp TTE-EEEEEECSSSS---EEEEEEEESSHH
T ss_pred CCc-EEEEeeCCCCc---EEEEEEEECCHH
Confidence 997 99999999999 999999997643
No 4
>1wqa_A Phospho-sugar mutase; alpha-beta protein, unphosphorylated form, enzyme-metal COMP isomerase; 2.00A {Pyrococcus horikoshii}
Probab=100.00 E-value=6.2e-87 Score=737.42 Aligned_cols=432 Identities=24% Similarity=0.340 Sum_probs=379.1
Q ss_pred CcCccCCeeEEccccccHHHHHHHHHHHHHhCCCCCCCCCeEEEEecCCcCHHHHHHHHHHHHHhCCCeEEEECCCCccc
Q 006678 92 QKTGTSGLRKKVKVFKQENYLANWIQALFNSLPPEDYKNGHLVLGGDGRYFNKEAAQIIIKIAAGNGVGKIMVGRDGIMS 171 (635)
Q Consensus 92 ~~FGt~GiRG~~~v~~tp~~~~~~~~A~g~~l~~~~~~~~~VvVG~D~R~sS~~la~a~a~gL~s~Gv~V~~~~~~G~~p 171 (635)
.+|||+||||+++.++|++++.++++|+|.++.+......+|+||||+|.+|++|+++++++|+++|++|+++ |++|
T Consensus 3 ~~Fgt~GiRG~~~~~lt~~~v~~~~~a~~~~l~~~~~~~~~VvIG~D~R~ss~~l~~a~~~gl~~~G~~V~~~---g~~p 79 (455)
T 1wqa_A 3 KLFGTFGVRGIANEKITPEFAMKIGMAFGTLLKREGRKKPLVVVGRDTRVSGEMLKEALISGLLSVGCDVIDV---GIAP 79 (455)
T ss_dssp TTCBTTBEEEEBTTTBCHHHHHHHHHHHHHHHHHTTCSSCEEEEEECSCTTHHHHHHHHHHHHHHTTCEEEEE---EECC
T ss_pred cccCCCceeeecCCCcCHHHHHHHHHHHHHHHHhcCCCCCeEEEEeCCCcCHHHHHHHHHHHHHHcCCeEEEe---CCCC
Confidence 4799999999999999999999999999999963221235699999999999999999999999999999999 9999
Q ss_pred hHHHHHHHHhccccceeEEeccCCCCCCCCCceEEEEcCCCCCCChhHHHHHHhccccchhhhccCCCCCCccccccccc
Q 006678 172 TPAVSAVIRKQKANGGFIMSASHNPGGPEYDWGIKFNYSSGQPAPESITDKIYGNTLSISEIKMADIPDVDLSSLGVTNF 251 (635)
Q Consensus 172 TP~v~fav~~~~a~gGI~ITASHNP~~~~~~nGiK~~~~~G~~l~~~~~~~Ie~~~~~ie~~~~~~~~~~~~~~ig~~~~ 251 (635)
||+++|++++++++||||||||||| ++||||||++++|.+++++.+++|++.+.+ ++ +++..++.+|
T Consensus 80 TP~l~~~v~~~~~~~GimITASHNP---~~~NGiK~~~~~G~~~~~~~~~~Ie~~~~~-~~-----~~~~~~~~~g---- 146 (455)
T 1wqa_A 80 TPAVQWATKHFNADGGAVITASHNP---PEYNGIKLLEPNGMGLKKEREAIVEELFFK-ED-----FDRAKWYEIG---- 146 (455)
T ss_dssp HHHHHHHHHHTTCSEEEEECCTTSC---TTEEEEEEECTTSSBCCHHHHHHHHHHHHH-TC-----CCCCCGGGCC----
T ss_pred hHHHHHHHHhcCCCEEEEEEeCCCC---hHHCeEEEEcCCCCcCCHHHHHHHHHHHhc-CC-----cccCCccCCc----
Confidence 9999999999999999999999999 899999999999999999999999998754 22 2334444443
Q ss_pred CCceeeecCchHHHHHHHHhhcCchhhhhhhcCCCcEEEEecCCCchhhchhHHHHHHcCCceeEeeccccCCCCCCCCC
Q 006678 252 GNFSVEVVDPVSDYLELMENVFDFPLIRSLLSRSDFRFVFDAMHAVTGAYAKPIFVEKLGAKPDSILNGVPLEDFGHGHP 331 (635)
Q Consensus 252 g~~~~~~~d~~~~Yi~~l~~~~~~~~I~~~~~~~~~kVvvD~~~Gaa~~~~~~lfl~~LG~~~~~~ln~~pd~~Fp~~~P 331 (635)
. +...|..+.|++.+++.++.+.++. +++|||+||+||+++.+++++| ++|||+++ .+|+.|||+||+++|
T Consensus 147 -~--~~~~~~~~~Y~~~l~~~~~~~~~~~----~~lkivvd~~nG~~~~~~~~~l-~~lG~~v~-~~~~~pdg~f~~~~~ 217 (455)
T 1wqa_A 147 -E--VRREDIIKPYIEAIKSKVDVEAIKK----RKPFVVVDTSNGAGSLTLPYLL-RELGCKVI-TVNAQPDGYFPARNP 217 (455)
T ss_dssp -C--EEECCCHHHHHHHHHTTSCHHHHHH----HCCEEEEECTTSGGGGTHHHHH-HHHTCEEE-EESCSCCTTCSSSCS
T ss_pred -c--eeccchHHHHHHHHHhhCChhhccc----CCCEEEEECCCccHHHHHHHHH-HHcCCEEE-EECCcCCCCCCCCCC
Confidence 2 3556899999999999998766654 5899999999999999999995 99999876 599999999999999
Q ss_pred CCCchhHHHHHHHHHhccCCcEEEEecCCCCeEEEEe-CCEEeCCCCHH-HHHHHHHHHhCCcCCCCCCeEEEeccChHH
Q 006678 332 DPNLTYARDLVAIMYGENGPDFGAASDGDGDRNMILG-KGFFVTPSDSV-AIIAANAQEAIPYFKSGPKGLARSMPTSGA 409 (635)
Q Consensus 332 ~P~~~~l~~L~~~va~~~~adlGia~DgDgDRl~vvd-~G~~l~~~d~l-alla~~ll~~~~~~~~g~~~Vv~~v~ts~~ 409 (635)
+|+.+++..+.+.+ ++.++|+|+++||||||++++| +|++++ +|++ +|++.|+++. .++ ..||.|++||.+
T Consensus 218 ~p~~~~l~~l~~~v-~~~~adlgia~DgDaDR~~~vd~~G~~l~-gd~i~~lla~~l~~~----~~~-~~vv~tv~ss~~ 290 (455)
T 1wqa_A 218 EPNEENLKEFMEIV-KALGADFGVAQDGDADRAVFIDENGRFIQ-GDKTFALVADAVLKE----KGG-GLLVTTVATSNL 290 (455)
T ss_dssp CCCTTTTHHHHHHH-HHHTCSEEEEECTTSCCEEEEETTSCBCC-HHHHHHHHHHHHHHH----HTS-CEEEEETTSCTH
T ss_pred CCchhHHHHHHHHH-HHcCCCEEEEECCCCCeEEEEeCCCCEEC-hhHHHHHHHHHHHHh----CCC-CeEEEeecCcHH
Confidence 99988999999999 9999999999999999999986 789999 7776 6778888754 222 249999999999
Q ss_pred HHHHHHHCCCCeEEeecchHHHHHHHHhcCceEEEeccCCC-CCCCccCCchHHHHHHHHHHHHHhcCCCCCCCCCCCHH
Q 006678 410 LDRVAEKLKLPFFEVPTGWKFFGNLMDARKLSVCGEESFGT-GSDHIREKDGIWAVLAWLSIVAHRNKDKKPGEKLISVS 488 (635)
Q Consensus 410 ld~ia~~~G~~v~~t~vG~k~i~~~m~~~~~~~ggEesgg~-~~~~~~~~Dgi~a~l~lle~la~~~~~~~~~~~~~tL~ 488 (635)
++++|+++|+++++|+|||||++++|.+.++++|||||||+ +++|.+++||++++++++++++..++ +|+
T Consensus 291 l~~~a~~~g~~~~~t~tG~k~i~~~m~~~~~~~ggE~sgg~~~~~~~~~~Dgi~a~l~~le~l~~~g~---------~L~ 361 (455)
T 1wqa_A 291 LDDIAKKHGAKVMRTKVGDLIVARALYENNGTIGGEENGGVIFPEHVLGRDGAMTVAKVVEIFAKSGK---------KFS 361 (455)
T ss_dssp HHHHHHHTTCEEEEECSSTTHHHHHHHHTTCSEEEETTEEEECTTTCSSCCHHHHHHHHHHHHHHHCS---------CHH
T ss_pred HHHHHHHCCCEEEEEcCcHHHHHHHHHhCCceEEEcCcCcEEECCcCcCccHHHHHHHHHHHHHhcCC---------CHH
Confidence 99999999999999999999999999999999999999998 89999999999999999999998876 999
Q ss_pred HHHHHHHHhhCcceeeecccccCChHHHHHHHHHHHhhccccccCCcCCCceeeecccCccCCCCCCCCCCcCeEEEEEc
Q 006678 489 DVVKAHWATYGRNFFSRYDYEECESEGANKMIGYLRDLVSKSKAGDKYGNYVLQFADDFAYTDPVDGSVASKQGVRFVFT 568 (635)
Q Consensus 489 ell~~l~~~~g~~~~~r~~~~~~~~~~~~~vm~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~d~v~~~i~~~dGiki~f~ 568 (635)
|+++++| .++..+.++ .|+++ +.++|++|++.+.. . + ..++.+||||+.|+
T Consensus 362 ~~~~~l~----~~~~~~~~v-~~~~~-~~~~~~~l~~~~~~--~-~--------------------~~~~~~DGlr~~~~ 412 (455)
T 1wqa_A 362 ELIDELP----KYYQIKTKR-HVEGD-RHAIVNKVAEMARE--R-G--------------------YTVDTTDGAKIIFE 412 (455)
T ss_dssp HHHHTSC----CCEEEEECC-BCCSS-HHHHHHHHHHHHHH--T-T--------------------CEEECTTSEEEECS
T ss_pred HHHHhcc----cccEeeEee-EcCcH-HHHHHHHHHHhhHh--h-c--------------------cccccCceEEEEec
Confidence 9998864 466777776 58888 88999999886421 0 1 12456789999999
Q ss_pred CCeEEEEEeCCCCCCCCEEEEEEEeeCcC
Q 006678 569 DGSRIIFRLSGTGSAGATVRIYIEQFEPD 597 (635)
Q Consensus 569 dGswvliRpSgTEP~~~~iriY~Ea~~~~ 597 (635)
|| |++|||||||| +||+|+|+.+++
T Consensus 413 ~g-w~lvRpSgTEP---~irvy~Ea~~~~ 437 (455)
T 1wqa_A 413 DG-WVLVRASGTEP---IIRIFSEAKSKE 437 (455)
T ss_dssp SC-EEEECCCSSSS---BCCEEEEESSHH
T ss_pred Cc-EEEEEeCCCCc---eEEEEEEECCHH
Confidence 98 99999999999 999999998754
No 5
>1tuo_A Putative phosphomannomutase; thermus thermophilus HB8, biosynthesis of alginate, structural genomics; 1.70A {Thermus thermophilus}
Probab=100.00 E-value=1.9e-86 Score=734.69 Aligned_cols=434 Identities=25% Similarity=0.361 Sum_probs=365.0
Q ss_pred CCCCCcCccCCeeEEccccccHHHHHHHHHHHHHhCCCCCCCCCeEEEEecCCcCHHHHHHHHHHHHHhCCCeEE-EECC
Q 006678 88 PIEGQKTGTSGLRKKVKVFKQENYLANWIQALFNSLPPEDYKNGHLVLGGDGRYFNKEAAQIIIKIAAGNGVGKI-MVGR 166 (635)
Q Consensus 88 ~~~~~~FGt~GiRG~~~v~~tp~~~~~~~~A~g~~l~~~~~~~~~VvVG~D~R~sS~~la~a~a~gL~s~Gv~V~-~~~~ 166 (635)
|.++++|||+||||+++.++|++++.++++|++.++.+. .+++|+||||+|.+|++|+++++++|+++|++|+ +.
T Consensus 8 ~~~~l~FGt~GiRG~~~~~lt~~~v~~~~~a~~~~l~~~--~~~~VvVG~D~R~ss~~~~~a~a~gl~~~G~~V~~~~-- 83 (464)
T 1tuo_A 8 MSAPIRFGTEGFRGVIAREFTFATLHRLAEAYGRHLLER--GGGLVVVGHDTRFLADAFARALSGHLAGMGLKVVLLK-- 83 (464)
T ss_dssp CCCCCCCCSSSEEEEBTTTBCHHHHHHHHHHHHHHHHHT--TCCEEEEEECSSTTHHHHHHHHHHHHHHHTCEEEEES--
T ss_pred ccCCccccCCCcceecCCCcCHHHHHHHHHHHHHHHHHh--CCCeEEEeeCCCCCHHHHHHHHHHHHHHCCCeEEEcC--
Confidence 446799999999999999999999999999999999732 1568999999999999999999999999999996 56
Q ss_pred CCccchHHHHHHHHhccccceeEEeccCCCCCCCCCceEEEEcCCCCCCChhHHHHHHhccccchhhhccCCCCCCcccc
Q 006678 167 DGIMSTPAVSAVIRKQKANGGFIMSASHNPGGPEYDWGIKFNYSSGQPAPESITDKIYGNTLSISEIKMADIPDVDLSSL 246 (635)
Q Consensus 167 ~G~~pTP~v~fav~~~~a~gGI~ITASHNP~~~~~~nGiK~~~~~G~~l~~~~~~~Ie~~~~~ie~~~~~~~~~~~~~~i 246 (635)
|++|||+++|++++++++||||||||||| ++||||||++++|.+++++.+++|++.++ + + .+...
T Consensus 84 -g~~pTP~~~~av~~~~~~~GImITASHNP---~~~NGiK~~~~~G~~i~~~~~~~Ie~~~~--~-------~--~~~~~ 148 (464)
T 1tuo_A 84 -GPVPTPLLSFAVRHLKAAGGAMLTASHNP---PQYLGVKFKDATGGPIAQEEAKAIEALVP--E-------E--ARALE 148 (464)
T ss_dssp -SSCCHHHHHHHHHHTTCSEEEEECCTTSC---TTEEEEEEEETTTEECCHHHHHHHHHTCC--S-------C--CCCCC
T ss_pred -CCCCHHHHHHHHHHhCCCceEEEcCCCCC---chHCCEEEEcCCCCcCChHHHHHHHHHhc--C-------C--ccccC
Confidence 99999999999999999999999999999 89999999999999999999999998864 1 0 11222
Q ss_pred cccccCCceeeecCchHHHHHHHHhhcCchhhhhhhcCCCcEEEEecCCCchhhchhHHHHHHcCC--ceeEeeccccCC
Q 006678 247 GVTNFGNFSVEVVDPVSDYLELMENVFDFPLIRSLLSRSDFRFVFDAMHAVTGAYAKPIFVEKLGA--KPDSILNGVPLE 324 (635)
Q Consensus 247 g~~~~g~~~~~~~d~~~~Yi~~l~~~~~~~~I~~~~~~~~~kVvvD~~~Gaa~~~~~~lfl~~LG~--~~~~~ln~~pd~ 324 (635)
| .+...|..+.|++.+++.++.+.|+. +++|||+||+||+++.+++++| ++||| +++ .+|++|||
T Consensus 149 g-------~~~~~d~~~~Y~~~l~~~~~~~~i~~----~~lkivvd~~nG~~~~~~~~~l-~~lG~~~~v~-~~~~~pDg 215 (464)
T 1tuo_A 149 G-------AYETLDLREAYFEALKAHLDLKALSG----FSGVLYHDSMGGAGAGFLKGFL-RHVGLEIPVR-PIREEPHP 215 (464)
T ss_dssp C-------CCEEECCHHHHHHHHHTTSCHHHHTT----CCSCEEEECTTSTTTTHHHHHH-HHTTCCCCEE-EESCSCCT
T ss_pred C-------ceEEcCcHHHHHHHHhhhcChhhccc----cCCEEEEECCCCcHHHHHHHHH-HHCCCCceEE-EEecccCC
Confidence 2 23455899999999999998776653 6999999999999999999995 99999 866 59999999
Q ss_pred CCCCCCCCCCchhHHHHHHHHHh-ccCCcEEEEecCCCCeEEEEe-CCEEeCCCCHH-HHHHHHHHHhCCcCCCCCCeEE
Q 006678 325 DFGHGHPDPNLTYARDLVAIMYG-ENGPDFGAASDGDGDRNMILG-KGFFVTPSDSV-AIIAANAQEAIPYFKSGPKGLA 401 (635)
Q Consensus 325 ~Fp~~~P~P~~~~l~~L~~~va~-~~~adlGia~DgDgDRl~vvd-~G~~l~~~d~l-alla~~ll~~~~~~~~g~~~Vv 401 (635)
+||+++|||+.+++.+|.+.+ + +.++|+|+++||||||++++| +|++++ +|++ +|++.|+++. .++ ..||
T Consensus 216 ~Fp~~~p~p~~~~~~~l~~~v-~~~~~adlgia~DgDaDR~~vvd~~G~~l~-gd~i~~Lla~~l~~~----~~~-~~vv 288 (464)
T 1tuo_A 216 LFHGVNPEPIPKNLGVTLAVL-GPETPPSFAVATDGDADRVGVVLPGGVFFN-PHQVLTTLALYRFRK----GHR-GRAV 288 (464)
T ss_dssp TGGGSCSCCSGGGCHHHHHHH-TTCCTTCEEEEECTTSSBEEEEETTTEEEC-HHHHHHHHHHHHHHT----TCC-SEEE
T ss_pred CCCCCCcCCCchhHHHHHHHH-HhccCCCEEEEECCCCCeEEEEeCCCEEEC-HHHHHHHHHHHHHhh----CCC-CeEE
Confidence 999999999999999999999 6 899999999999999999996 789999 7776 6778887653 122 2599
Q ss_pred EeccChHHHHHHHHHCCCCeEEeecchHHHHHHHHhcCceEEEeccCCC-CCCCccCCchHHHHHHHHHHHHHhcCCCCC
Q 006678 402 RSMPTSGALDRVAEKLKLPFFEVPTGWKFFGNLMDARKLSVCGEESFGT-GSDHIREKDGIWAVLAWLSIVAHRNKDKKP 480 (635)
Q Consensus 402 ~~v~ts~~ld~ia~~~G~~v~~t~vG~k~i~~~m~~~~~~~ggEesgg~-~~~~~~~~Dgi~a~l~lle~la~~~~~~~~ 480 (635)
.|++||.+++++|+++|+++++|+|||||+.++|++.++++|||||||+ +++|.+++||++++++++|+++..++
T Consensus 289 ~tv~ss~~l~~~a~~~g~~~~~t~tG~k~i~~~m~~~~~~~ggE~Sgg~~~~~~~~~~Dgi~a~l~~le~~a~~g~---- 364 (464)
T 1tuo_A 289 KNFAVTWLLDRLGERLGFGVTTTPVGFKWIKEEFLKGDCFIGGEESGGVGYPEHLPERDGILTSLLLLESVAATGK---- 364 (464)
T ss_dssp EETTSCTHHHHHHHHHTCCEEEECSSHHHHHHHHTTTCEEEEECTTSBEEETTTEEEECHHHHHHHHHHHHHHHSC----
T ss_pred EeecchHHHHHHHHHcCCeEEEecCcHHHHHHHHHhcCcEEEEccceeEEECCcCcCCCHHHHHHHHHHHHHhhCC----
Confidence 9999999999999999999999999999999999999999999999998 78999999999999999999998776
Q ss_pred CCCCCCHHHHHHHHHHhhC-cceeeecccccCChHHHHHHHHHHHhhccccccCCcCCCceeeecccCccCCCCCCCCCC
Q 006678 481 GEKLISVSDVVKAHWATYG-RNFFSRYDYEECESEGANKMIGYLRDLVSKSKAGDKYGNYVLQFADDFAYTDPVDGSVAS 559 (635)
Q Consensus 481 ~~~~~tL~ell~~l~~~~g-~~~~~r~~~~~~~~~~~~~vm~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~d~v~~~i~~ 559 (635)
+|+|++++||++|| ++++.+.++ .|+++. +|+++++. ..++ +.++. .++.
T Consensus 365 -----~L~ell~~l~~~~~~~~~~~~~~v-~~~~~~---~~~~l~~~----~~~~---~~~~~-------------~v~~ 415 (464)
T 1tuo_A 365 -----DLAEQFKEVEALTGLTHAYDRLDL-PLKAPL---DLTPFREP----RPLA---GLTPK-------------GVDT 415 (464)
T ss_dssp -----CHHHHHHHHHHHHTCCCEEEEEC-----------------------CCCT---TCCEE-------------EEEC
T ss_pred -----CHHHHHHHHHHHcCccccceEEeE-EeCCHH---HHHhhhhh----HhhC---CCcee-------------EEEc
Confidence 99999999999999 999988888 577654 88888663 1111 22222 2456
Q ss_pred cCeEEEEEcCCeEEEEEeCCCCCCCCEEEEEEEeeCcC
Q 006678 560 KQGVRFVFTDGSRIIFRLSGTGSAGATVRIYIEQFEPD 597 (635)
Q Consensus 560 ~dGiki~f~dGswvliRpSgTEP~~~~iriY~Ea~~~~ 597 (635)
+||||+.|+| +|++|||||||| ++|+|+|+.+++
T Consensus 416 ~DGl~~~~~~-~w~lvRpSgTEP---~lrvy~Ea~~~~ 449 (464)
T 1tuo_A 416 LDGVKWLYEE-AWVLFRASGTEP---VVRIYVEAQSPE 449 (464)
T ss_dssp SSSEEEEETT-EEEEEECC--------CEEEEEESSHH
T ss_pred CCeEEEEECC-EEEEEEcCCCcc---EEEEEEEeCCHH
Confidence 7899999999 699999999999 999999998754
No 6
>3na5_A Phosphoglucomutase; isomerase, metal binding; HET: BTB; 1.70A {Salmonella enterica subsp} PDB: 3olp_A 2fuv_A*
Probab=100.00 E-value=4.9e-86 Score=745.98 Aligned_cols=496 Identities=23% Similarity=0.275 Sum_probs=398.6
Q ss_pred CccccccCCCCCCC----------CcCccCCeeEEcc-ccccHHHHHHHHHHHHHhCCCCCCCCCeEEEEecCCcCHHHH
Q 006678 78 GIKVNSVPTKPIEG----------QKTGTSGLRKKVK-VFKQENYLANWIQALFNSLPPEDYKNGHLVLGGDGRYFNKEA 146 (635)
Q Consensus 78 ~~~~~~i~~~~~~~----------~~FGt~GiRG~~~-v~~tp~~~~~~~~A~g~~l~~~~~~~~~VvVG~D~R~sS~~l 146 (635)
..++.+|.++|+.. +.|||+||||+++ ..+|++++.++++|+|.++.+.. ..++|+||||+|.+|+++
T Consensus 40 ~~~~~~l~~~~~~~~~~~~~~~~r~~FGT~GiRG~~~~~~ln~~~v~~i~~A~a~~l~~~~-~~~~VvVG~D~R~~S~~~ 118 (570)
T 3na5_A 40 LINVAQLTAQYYVLKPEAGNAEHAVKFGTSGHRGSAGRHSFNEPHILAIAQAIAEERAKNG-ITGPCYVGKDTHALSEPA 118 (570)
T ss_dssp CCCHHHHHHHHHHCCCCTTCGGGSCCCBTTBEEECGGGTSSSHHHHHHHHHHHHHHHHHTT-CCSCEEEEECSSTTHHHH
T ss_pred ccChHHHHHHHhccCCCcCCccccceecCCCceeecCCCCCCHHHHHHHHHHHHHHHHHhC-CCCeEEEEeCCCcccHHH
Confidence 44566666666655 9999999999997 67999999999999999986221 235799999999999999
Q ss_pred HHHHHHHHHhCCCeEEEECCCCccchHHHHHHHHhcc-----ccceeEEeccCCCCCCCCCceEEEEcCCCCCCChhHHH
Q 006678 147 AQIIIKIAAGNGVGKIMVGRDGIMSTPAVSAVIRKQK-----ANGGFIMSASHNPGGPEYDWGIKFNYSSGQPAPESITD 221 (635)
Q Consensus 147 a~a~a~gL~s~Gv~V~~~~~~G~~pTP~v~fav~~~~-----a~gGI~ITASHNP~~~~~~nGiK~~~~~G~~l~~~~~~ 221 (635)
+++++++|+++|++|+++++.|++|||+++|++++++ +++|||||||||| ++||||||++++|.|+++++++
T Consensus 119 ~~~a~~~L~a~Gi~V~~~~d~g~~PTP~vsfav~~~~~~~~~~~~GImITASHNP---~~~NGiK~~~~~G~~~~~~i~~ 195 (570)
T 3na5_A 119 FISVLEVLAANGVDVIVQENNGFTPTPAVSNAILVHNKKGGPLADGIVITPSHNP---PEDGGIKYNPPNGGPADTNVTK 195 (570)
T ss_dssp HHHHHHHHHHTTCCEEEEGGGCCCCHHHHHHHHHHHHHTCSSCCEEEEECCTTCC---TTCEEEEEECTTSSCCCHHHHH
T ss_pred HHHHHHHHHHCCCEEEEeCCCCccChHHHHHHHHHhCCCccccceEEEEEeCCCC---hHHCcEEEecCCCCcCCHHHHH
Confidence 9999999999999999764349999999999999998 8999999999999 8999999999999999999999
Q ss_pred HHHhccccchhhhccCCCCCCcccccccccCCceeeecCchHHHHHHHHhhcCchhhhhhhcCCCcEEEEecCCCchhhc
Q 006678 222 KIYGNTLSISEIKMADIPDVDLSSLGVTNFGNFSVEVVDPVSDYLELMENVFDFPLIRSLLSRSDFRFVFDAMHAVTGAY 301 (635)
Q Consensus 222 ~Ie~~~~~ie~~~~~~~~~~~~~~ig~~~~g~~~~~~~d~~~~Yi~~l~~~~~~~~I~~~~~~~~~kVvvD~~~Gaa~~~ 301 (635)
+|++.++++.+....++++.+++... ..+.+...|..+.|++.+.+.++.+.|+. +++|||+||+||+++.+
T Consensus 196 ~Ie~~~~~~~~~~~~~~~~~~~~~~~----~~g~i~~~d~~~~Yi~~l~~~i~~~~i~~----~~lkIvvD~~~Gag~~~ 267 (570)
T 3na5_A 196 VVEDRANALLAGGLQGVKRISLDAAM----ASGHVKAVDLVQPFVEGLADIVDMAAIQK----AGLTLGVDPLGGSGIEY 267 (570)
T ss_dssp HHHHHHHHHHHTTTTTCCCCCHHHHH----HTTCEEEECCHHHHHHHGGGTSCHHHHHH----HTCCEEEECTTCTTHHH
T ss_pred HHHHHHHHhhhcccccccccchhhhc----cCCeeeccchHHHHHHHHHhhcChhhhcc----CCCEEEEECCCCcHHHH
Confidence 99987654211111123344443211 01235567899999999999999887764 68999999999999999
Q ss_pred hhHHHHHHcCCceeEeeccccCCCCCCCCCC--------CCch-hHHHHHHHHHhccCCcEEEEecCCCCeEEEEeCCEE
Q 006678 302 AKPIFVEKLGAKPDSILNGVPLEDFGHGHPD--------PNLT-YARDLVAIMYGENGPDFGAASDGDGDRNMILGKGFF 372 (635)
Q Consensus 302 ~~~lfl~~LG~~~~~~ln~~pd~~Fp~~~P~--------P~~~-~l~~L~~~va~~~~adlGia~DgDgDRl~vvd~G~~ 372 (635)
++++| ++|||+++ ++|++|||+||+++|+ |..+ ++..+.+ .+.++|+|+++||||||++++++|++
T Consensus 268 ~~~il-~~lG~~v~-~v~~~~D~~F~~~~p~~~G~i~~~~~~~~al~~l~~---~~~~aDlgia~DgDaDR~~ivd~g~~ 342 (570)
T 3na5_A 268 WKRIA-EHYKLNLT-LVNDQVDQTFRFMHLDKDGAIRMDCSSECAMAGLLA---LRDKFDLAFANDPDYDRHGIVTPAGL 342 (570)
T ss_dssp HHHHH-HHTTCCEE-ESCCCCCTTCTTSBCCTTSSCCCCTTCTTTTHHHHT---TGGGCSEEEEECTTSCBEEEEETTEE
T ss_pred HHHHH-HHcCCeEE-EECCEECCCCCCCCCCcccccCCCCCChHHHHHHHH---hccCCCEEEEECCCCCeEEEEECCEE
Confidence 99995 99999975 6999999999998764 4443 3444543 47799999999999999999987999
Q ss_pred eCCCCHH-HHHHHHHHHhCCcCCCCCCeEEEeccChHHHHHHHHHCCCCeEEeecchHHHHHHHHhcCceEEEeccCCC-
Q 006678 373 VTPSDSV-AIIAANAQEAIPYFKSGPKGLARSMPTSGALDRVAEKLKLPFFEVPTGWKFFGNLMDARKLSVCGEESFGT- 450 (635)
Q Consensus 373 l~~~d~l-alla~~ll~~~~~~~~g~~~Vv~~v~ts~~ld~ia~~~G~~v~~t~vG~k~i~~~m~~~~~~~ggEesgg~- 450 (635)
++ +|++ ++++.|+++..+.+ ++...|+.|++||.+++++|+++|+++++|+||||||+++|.+.+++||||||||+
T Consensus 343 l~-gd~~lal~a~~ll~~~~~~-~~~~~v~~t~vSs~~l~~ia~~~G~~~~~t~tG~k~i~~~m~~~~~~~ggEeSgg~~ 420 (570)
T 3na5_A 343 MN-PNHYLAVAINYLFQHRPLW-GKDVAVGKTLVSSAMIDRVVNDLGRKLVEVPVGFKWFVDGLFDGSFGFGGEESAGAS 420 (570)
T ss_dssp CC-HHHHHHHHHHHHTTSCTTS-CTTCEEEEETTSCTHHHHHHHHHTCCEEEECSSTHHHHHHHHTTSEEEEEETTTEEE
T ss_pred EC-HhHHHHHHHHHHHHhCCCC-CCCceEEEeeCchHHHHHHHHHCCCceEEecccHHHHHHHHHhcCCeEEEeccCCcc
Confidence 99 6666 77788876542211 11235899999999999999999999999999999999999999999999999996
Q ss_pred CCC-----CccCCchHHHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhhCcceeeecccccCChHHHHHHHHHHHh
Q 006678 451 GSD-----HIREKDGIWAVLAWLSIVAHRNKDKKPGEKLISVSDVVKAHWATYGRNFFSRYDYEECESEGANKMIGYLRD 525 (635)
Q Consensus 451 ~~~-----~~~~~Dgi~a~l~lle~la~~~~~~~~~~~~~tL~ell~~l~~~~g~~~~~r~~~~~~~~~~~~~vm~~l~~ 525 (635)
+.+ |.+++|||+++++++|+++..++ +|++++++||++||.+++.|.++ .|+++.+ ++|++|++
T Consensus 421 f~~~~g~~~~~dkDGi~aal~~le~~a~~g~---------~lsell~~l~~~yg~~~~~r~~~-~~~~~~k-~~m~~l~~ 489 (570)
T 3na5_A 421 FLRFDGTPWSTDKDGIIMCLLAAEITAVTGK---------NPQEHYNELAARFGAPSYNRLQA-SATSAQK-AALSKLSP 489 (570)
T ss_dssp ECCTTSCCSCSSCCHHHHHHHHHHHHHHHSS---------CHHHHHHHHHHHHCCCEEEEEEE-ECCHHHH-HHHHTCCG
T ss_pred cccccccceeecCcHHHHHHHHHHHHHHhCC---------CHHHHHHHHHHHhCCceeEEecC-CCCHHHH-HHHHHhhh
Confidence 544 88999999999999999999877 99999999999999988889888 5887765 68888765
Q ss_pred hccccccCCcCCCceeeecccCccCCCCCCCCCCcCeEEEEEcCCeEEEEEeCCCCCCCCEEEEEEEee-CcChhhhHHH
Q 006678 526 LVSKSKAGDKYGNYVLQFADDFAYTDPVDGSVASKQGVRFVFTDGSRIIFRLSGTGSAGATVRIYIEQF-EPDVSKHEMD 604 (635)
Q Consensus 526 ~~~~~~~~~~~~~~~i~~~~~~~~~d~v~~~i~~~dGiki~f~dGswvliRpSgTEP~~~~iriY~Ea~-~~~~~~~~~~ 604 (635)
....+..++ +.+|+.+.++.. +.++.+||||+.|+|| |+++||||||| ++|||+|+. +++ .+++
T Consensus 490 ~~~~~~~~~---g~~i~~~~~~~~-----~~~~~iDGlkv~~~dg-W~lvRpSgTEP---~lriy~Ea~~~~e---~l~~ 554 (570)
T 3na5_A 490 EMVSASTLA---GDPITARLTAAP-----GNGASIGGLKVMTDNG-WFAARPSGTED---AYKIYCESFLGEE---HRKQ 554 (570)
T ss_dssp GGCCCSEET---TEECCEEEEECT-----TTCCEEEEEEEECSSE-EEEEEECSSSS---EEEEEEEESSCHH---HHHH
T ss_pred ccCcchhhc---CcceEEEeeccc-----CCcCCCCeEEEEecCc-EEEEEECCCCC---eEEEEEEcCCCHH---HHHH
Confidence 421122222 446655544321 3466789999999986 99999999999 999999994 433 3345
Q ss_pred HHHHHHHHHHHHHh
Q 006678 605 AQSALKPLIDLALS 618 (635)
Q Consensus 605 ~~~~l~~~i~~~~~ 618 (635)
.++++..+|+.+++
T Consensus 555 l~~~~~~~v~~~~~ 568 (570)
T 3na5_A 555 IEKEAVEIVSEVLK 568 (570)
T ss_dssp HHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHh
Confidence 55566666666653
No 7
>1p5d_X PMM, phosphomannomutase; alpha/beta protein, phosphohexomutase, phosphoserine, enzyme complex, enzyme-metal complex, isomerase; HET: SEP G1P; 1.60A {Pseudomonas aeruginosa} SCOP: c.84.1.1 c.84.1.1 c.84.1.1 d.129.2.1 PDB: 1k35_A* 1p5g_X* 1pcj_X* 1pcm_X* 1k2y_X* 2h5a_X* 2h4l_X* 2fkf_A* 3rsm_A 3bkq_X* 3c04_A* 2fkm_X*
Probab=100.00 E-value=7.5e-84 Score=714.29 Aligned_cols=441 Identities=19% Similarity=0.240 Sum_probs=375.9
Q ss_pred CCCCcCccCCeeEEccccccHHHHHHHHHHHHHhCCCCCCCCCeEEEEecCCcCHHHHHHHHHHHHHhCCCeEEEECCCC
Q 006678 89 IEGQKTGTSGLRKKVKVFKQENYLANWIQALFNSLPPEDYKNGHLVLGGDGRYFNKEAAQIIIKIAAGNGVGKIMVGRDG 168 (635)
Q Consensus 89 ~~~~~FGt~GiRG~~~v~~tp~~~~~~~~A~g~~l~~~~~~~~~VvVG~D~R~sS~~la~a~a~gL~s~Gv~V~~~~~~G 168 (635)
+.+.+|||+||||+++.++|++++.++++|+|.++.+. .+++|+||||+|.+|++|++++++||+++|++|+++ |
T Consensus 9 ~~~~~Fgt~GiRG~~~~~~t~~~~~~i~~a~~~~l~~~--~~~~VvVG~D~R~ss~~l~~a~~~gl~a~G~~V~~~---g 83 (463)
T 1p5d_X 9 LPASIFRAYDIRGVVGDTLTAETAYWIGRAIGSESLAR--GEPCVAVGRDGRLSGPELVKQLIQGLVDCGCQVSDV---G 83 (463)
T ss_dssp CCGGGBCSSSEEEEBTTTBCHHHHHHHHHHHHHHHHHT--TCCEEEEEECSCTTHHHHHHHHHHHHHTBTCEEEEE---E
T ss_pred ccccccCCCCcceeCCCCCCHHHHHHHHHHHHHHHHHc--CCCeEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEe---C
Confidence 46789999999999999999999999999999999622 246899999999999999999999999999999999 9
Q ss_pred ccchHHHHHHHHhccccceeEEeccCCCCCCCCCceEEEEcCCCCCCChhHHHHHHhccccchhhhccCCCCCCcccccc
Q 006678 169 IMSTPAVSAVIRKQKANGGFIMSASHNPGGPEYDWGIKFNYSSGQPAPESITDKIYGNTLSISEIKMADIPDVDLSSLGV 248 (635)
Q Consensus 169 ~~pTP~v~fav~~~~a~gGI~ITASHNP~~~~~~nGiK~~~~~G~~l~~~~~~~Ie~~~~~ie~~~~~~~~~~~~~~ig~ 248 (635)
++|||+++|+++++++++|||||||||| ++||||||++ +|.+++++.+++|++.+.+ +++ ++ ..|
T Consensus 84 ~~pTP~l~~av~~~~~~~GImITASHNP---~~~NGiK~~~-~G~~i~~~~~~~I~~~~~~-~~~-----~~----~~g- 148 (463)
T 1p5d_X 84 MVPTPVLYYAANVLEGKSGVMLTGSHNP---PDYNGFKIVV-AGETLANEQIQALRERIEK-NDL-----AS----GVG- 148 (463)
T ss_dssp ECCHHHHHHHHHHSSCSEEEEECCTTSC---TTEEEEEEEE-TTEECCTHHHHHHHHHHHH-TCC-----CC----BCC-
T ss_pred CCChHHHHHHHHhcCCCeEEEEccCCCC---cccceEEEEC-CCccCCHHHHHHHHHHHhc-CCc-----cc----CCC-
Confidence 9999999999999999999999999999 7999999999 9999999999999988743 111 11 122
Q ss_pred cccCCceeeecCchHHHHHHHHhhcCchhhhhhhcCCCcEEEEecCCCchhhchhHHHHHHcCCceeEeeccccCCCCCC
Q 006678 249 TNFGNFSVEVVDPVSDYLELMENVFDFPLIRSLLSRSDFRFVFDAMHAVTGAYAKPIFVEKLGAKPDSILNGVPLEDFGH 328 (635)
Q Consensus 249 ~~~g~~~~~~~d~~~~Yi~~l~~~~~~~~I~~~~~~~~~kVvvD~~~Gaa~~~~~~lfl~~LG~~~~~~ln~~pd~~Fp~ 328 (635)
.+...|..+.|++.+++.++.+ +++|||+||+||+++.+++++| ++|||+++ .+|++|||+||+
T Consensus 149 ------~~~~~d~~~~Y~~~l~~~~~~~--------~~lkivvD~~nG~~~~~~~~ll-~~lG~~v~-~~~~~pDg~f~~ 212 (463)
T 1p5d_X 149 ------SVEQVDILPRYFKQIRDDIAMA--------KPMKVVVDCGNGVAGVIAPQLI-EALGCSVI-PLYCEVDGNFPN 212 (463)
T ss_dssp ------EEEECCCHHHHHHHHHTTCCCS--------SCEEEEEECTTSGGGGTHHHHH-HHHHEEEE-EESCSCCTTCCS
T ss_pred ------ceecCChHHHHHHHHHhhhccc--------CCCEEEEECCCCcHHHHHHHHH-HHcCCeEE-EEeCccCCCCCC
Confidence 2455689999999999988642 4899999999999999999995 99999976 599999999999
Q ss_pred CCCCCCc-hhHHHHHHHHHhccCCcEEEEecCCCCeEEEEe-CCEEeCCCCHH-HHHHHHHHHhCCcCCCCCCeEEEecc
Q 006678 329 GHPDPNL-TYARDLVAIMYGENGPDFGAASDGDGDRNMILG-KGFFVTPSDSV-AIIAANAQEAIPYFKSGPKGLARSMP 405 (635)
Q Consensus 329 ~~P~P~~-~~l~~L~~~va~~~~adlGia~DgDgDRl~vvd-~G~~l~~~d~l-alla~~ll~~~~~~~~g~~~Vv~~v~ 405 (635)
++|||+. +++..+.+.+ ++.++|+|+++||||||++++| +|++++ +|++ +|++.|+++.. ++. .||.++.
T Consensus 213 ~~p~p~~~~~l~~l~~~v-~~~~adlgia~DgDaDR~~~vd~~G~~l~-gd~i~~L~a~~l~~~~----~~~-~vv~~v~ 285 (463)
T 1p5d_X 213 HHPDPGKPENLKDLIAKV-KAENADLGLAFDGDGDRVGVVTNTGTIIY-PDRLLMLFAKDVVSRN----PGA-DIIFDVK 285 (463)
T ss_dssp SCSCTTSGGGGHHHHHHH-HHTTCSEEEEECTTSSBEEEEETTCCEEC-HHHHHHHHHHHHHHHS----TTC-EEEEETT
T ss_pred CCcCCCCHHHHHHHHHHH-HHhCCCEEEEECCCCCeEEEEeCCCcEeC-HHHHHHHHHHHHHHhC----CCC-eEEEEec
Confidence 9999997 5888999998 9999999999999999999986 689999 8887 66788887652 332 4999999
Q ss_pred ChHHHHHHHHHCCCCeEEeecchHHHHHHHHhcCceEEEeccCCC-CCC-CccCCchHHHHHHHHHHHHHhcCCCCCCCC
Q 006678 406 TSGALDRVAEKLKLPFFEVPTGWKFFGNLMDARKLSVCGEESFGT-GSD-HIREKDGIWAVLAWLSIVAHRNKDKKPGEK 483 (635)
Q Consensus 406 ts~~ld~ia~~~G~~v~~t~vG~k~i~~~m~~~~~~~ggEesgg~-~~~-~~~~~Dgi~a~l~lle~la~~~~~~~~~~~ 483 (635)
||.+++++++++|+++++|+|||||+.++|++.++.+|||+|||+ +++ |..++||+++++++|+++++.++
T Consensus 286 ss~~l~~~~~~~g~~~~~t~tG~k~i~~~m~~~~~~~ggE~sG~~~~~~~~~~~~Dgi~aal~~le~~a~~g~------- 358 (463)
T 1p5d_X 286 CTRRLIALISGYGGRPVMWKTGHSLIKKKMKETGALLAGEMSGHVFFKERWFGFDDGIYSAARLLEILSQDQR------- 358 (463)
T ss_dssp SCTHHHHHHHHTTCEEEEECSSHHHHHHHHHHHCCSEEECTTSBEEETTTTCSSBCHHHHHHHHHHHHHTCSS-------
T ss_pred CcHHHHHHHHHcCCEEEEeCCcHHHHHHHHHhcCCceeecCCCcEEeccccCCCCcHHHHHHHHHHHHHHhCC-------
Confidence 999999999999999999999999999999999999999999998 666 77789999999999999998766
Q ss_pred CCCHHHHHHHHHHhhCcceee-ecccccCChHHHHHHHHHHHhhccccccCCcCCCceeeecccCccCCCCCCCCCCcCe
Q 006678 484 LISVSDVVKAHWATYGRNFFS-RYDYEECESEGANKMIGYLRDLVSKSKAGDKYGNYVLQFADDFAYTDPVDGSVASKQG 562 (635)
Q Consensus 484 ~~tL~ell~~l~~~~g~~~~~-r~~~~~~~~~~~~~vm~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~d~v~~~i~~~dG 562 (635)
+|+|++++||+. |.. +.++ .|+++.+.++|+++++... ++ + .+++.+||
T Consensus 359 --~Ls~ll~~l~~~----~~~~~~~v-~~~~~~~~~~~~~l~~~~~----~~---~----------------~~~~~~DG 408 (463)
T 1p5d_X 359 --DSEHVFSAFPSD----ISTPEINI-TVTEDSKFAIIEALQRDAQ----WG---E----------------GNITTLDG 408 (463)
T ss_dssp --CHHHHHHTSCCC----EECCCEEE-ECCTTTHHHHHHHHHHHCC----CC---S----------------SEEECSSS
T ss_pred --CHHHHHHHhhHh----hCceeEEE-EcCchhHHHHHHHHHhccc----cC---C----------------Ccccccce
Confidence 999999998753 333 4455 5888878899999955410 00 0 12456789
Q ss_pred EEEEEcCCeEEEEEeCCCCCCCCEEEEEEEeeCcChhhhHHHHHHHHHHHHHHH
Q 006678 563 VRFVFTDGSRIIFRLSGTGSAGATVRIYIEQFEPDVSKHEMDAQSALKPLIDLA 616 (635)
Q Consensus 563 iki~f~dGswvliRpSgTEP~~~~iriY~Ea~~~~~~~~~~~~~~~l~~~i~~~ 616 (635)
||+.|+|| |++|||||||| ++|||+|+.+++. .++..+.+.++|+.+
T Consensus 409 lr~~~~~g-w~lvRpSgTEP---~~rvy~Ea~~~~~---~~~l~~~~~~~i~~~ 455 (463)
T 1p5d_X 409 VRVDYPKG-WGLVRASNTTP---VLVLRFEADTEEE---LERIKTVFRNQLKAV 455 (463)
T ss_dssp EEEEETTE-EEEEEECSSSS---EEEEEEEESSHHH---HHHHHHHHHHHHHHH
T ss_pred EEEEecCc-EEEEEecCCCc---eEEEEEEECCHHH---HHHHHHHHHHHHHhh
Confidence 99999997 99999999999 9999999987543 233344555556544
No 8
>3uw2_A Phosphoglucomutase/phosphomannomutase family PROT; structural genomics, seattle structural genomics center for infectious disease; 1.95A {Burkholderia thailandensis}
Probab=100.00 E-value=1.1e-83 Score=714.11 Aligned_cols=445 Identities=20% Similarity=0.232 Sum_probs=370.3
Q ss_pred CCCCCCcCccCCeeEEccccccHHHHHHHHHHHHHhCCCCCCCCCeEEEEecCCcCHHHHHHHHHHHHHhCCCeEEEECC
Q 006678 87 KPIEGQKTGTSGLRKKVKVFKQENYLANWIQALFNSLPPEDYKNGHLVLGGDGRYFNKEAAQIIIKIAAGNGVGKIMVGR 166 (635)
Q Consensus 87 ~~~~~~~FGt~GiRG~~~v~~tp~~~~~~~~A~g~~l~~~~~~~~~VvVG~D~R~sS~~la~a~a~gL~s~Gv~V~~~~~ 166 (635)
.++.+.+|||+||||++++++|++++.++++|+|.++.+. .+++|+||||+|.+|++|+++++++|+++|++|+++
T Consensus 21 ~~~~~~~Fgt~GiRG~~~~~lt~~~~~~ig~A~~~~l~~~--~~~~VvVG~D~R~ss~~~~~a~a~gl~a~Gi~V~~~-- 96 (485)
T 3uw2_A 21 SMISQSIFKAYDIRGVIGKTLDADVARSIGRAFGSEVRAQ--GGDAVVVARDGRLSGPELVGALADGLRAAGVDVVDV-- 96 (485)
T ss_dssp -CCCGGGBCSSSEEEEBTTTBCHHHHHHHHHHHHHHHHHT--TCCEEEEEECSCTTHHHHHHHHHHHHHHTTCEEEEE--
T ss_pred ccccccccccCCEEEEeCCCCCHHHHHHHHHHHHHHHHHc--CCCEEEEEECCCcCHHHHHHHHHHHHHHCCCEEEEe--
Confidence 3467889999999999999999999999999999998622 346899999999999999999999999999999999
Q ss_pred CCccchHHHHHHHH--------hccccceeEEeccCCCCCCCCCceEEEEcCCCCCCChhHHHHHHhccccchhhhccCC
Q 006678 167 DGIMSTPAVSAVIR--------KQKANGGFIMSASHNPGGPEYDWGIKFNYSSGQPAPESITDKIYGNTLSISEIKMADI 238 (635)
Q Consensus 167 ~G~~pTP~v~fav~--------~~~a~gGI~ITASHNP~~~~~~nGiK~~~~~G~~l~~~~~~~Ie~~~~~ie~~~~~~~ 238 (635)
|++|||+++|+++ ++++++|||||||||| ++||||||++ +|.+++++.+++|++.+.. +++
T Consensus 97 -g~~pTP~l~~av~~~~~~~~~~~~~~~GImITASHNP---~~~NGiK~~~-~G~~i~~~~~~~I~~~~~~-~~~----- 165 (485)
T 3uw2_A 97 -GMVPTPVGYFAASVPLALSGGERRVDSCIVVTGSHNP---PDYNGFKMVL-RGAAIYGDQIQGLYKRIVD-ARF----- 165 (485)
T ss_dssp -EECCHHHHHHHTTSCEEETTEEECCCCEEEECCTTSC---TTEEEEEEEE-TTEECCTHHHHHHHHHHHT-TCC-----
T ss_pred -CCCChHHHHHHHhccccccccccCCCeEEEEEeCCCC---cccceEEEec-CCCCCCHHHHHHHHHHHhc-CCc-----
Confidence 9999999999999 8999999999999999 8999999998 6999999999999887643 211
Q ss_pred CCCCcccccccccCCceeeecCchHHHHHHHHhhcCchhhhhhhcCCCcEEEEecCCCchhhchhHHHHHHcCCceeEee
Q 006678 239 PDVDLSSLGVTNFGNFSVEVVDPVSDYLELMENVFDFPLIRSLLSRSDFRFVFDAMHAVTGAYAKPIFVEKLGAKPDSIL 318 (635)
Q Consensus 239 ~~~~~~~ig~~~~g~~~~~~~d~~~~Yi~~l~~~~~~~~I~~~~~~~~~kVvvD~~~Gaa~~~~~~lfl~~LG~~~~~~l 318 (635)
++ ..| .+...|..+.|++.+.+.++.+ +++|||+||+||+++.+++++| ++|||+++ .+
T Consensus 166 ~~----~~g-------~~~~~d~~~~Yi~~l~~~i~~~--------~~lkIvvD~~~Ga~~~~~~~il-~~lG~~v~-~~ 224 (485)
T 3uw2_A 166 ET----GSG-------SYEQYDVADQYVERIVGDIKLT--------RPLKLVVDAGNGVAGPLATRLF-KALGCELV-EL 224 (485)
T ss_dssp CC----CCC-------CEEECCCHHHHHHHHHTTCCCS--------SCCCEEEECTTSTHHHHHHHHH-HHTTCCEE-EE
T ss_pred cc----CCc-------eEEecchHHHHHHHHHHhcCcc--------cCCEEEEEcCCCcHHHHHHHHH-HHcCCeEE-Ee
Confidence 11 112 2456688999999999988742 4799999999999999999995 99999976 59
Q ss_pred ccccCCCCCCCCCCCCc-hhHHHHHHHHHhccCCcEEEEecCCCCeEEEEe-CCEEeCCCCHH-HHHHHHHHHhCCcCCC
Q 006678 319 NGVPLEDFGHGHPDPNL-TYARDLVAIMYGENGPDFGAASDGDGDRNMILG-KGFFVTPSDSV-AIIAANAQEAIPYFKS 395 (635)
Q Consensus 319 n~~pd~~Fp~~~P~P~~-~~l~~L~~~va~~~~adlGia~DgDgDRl~vvd-~G~~l~~~d~l-alla~~ll~~~~~~~~ 395 (635)
|+.|||+||+++|||+. +++..+.+.+ ++.++|+|+++||||||++++| +|++++ +|++ ++++.|+++. .+
T Consensus 225 ~~~pDg~Fp~~~p~P~~~~~l~~l~~~v-~~~~aDlgia~DgDaDR~~vvd~~G~~i~-gd~~~alla~~ll~~----~~ 298 (485)
T 3uw2_A 225 FTDIDGNFPNHHPDPAHPENLQDVIAKL-KATDAEIGFAFDGDGDRLGVVTKDGQIIY-PDRQLMLFAEEVLSR----NP 298 (485)
T ss_dssp SCSCCTTCCSSCSCTTSGGGGHHHHHHH-HHSSCCEEEEECTTSSCEEEECTTSCBCC-HHHHHHHHHHHHHHH----ST
T ss_pred cCccCCCCCCCCcCCCCHHHHHHHHHHH-HhhCCCEEEEECCCCCeEEEEeCCCceEC-HHHHHHHHHHHHHHh----CC
Confidence 99999999999999986 4888899988 9999999999999999999996 689999 7776 7778888765 23
Q ss_pred CCCeEEEeccChHHHHHHHHHCCCCeEEeecchHHHHHHHHhcCceEEEeccCCC-CCCC-ccCCchHHHHHHHHHHHHH
Q 006678 396 GPKGLARSMPTSGALDRVAEKLKLPFFEVPTGWKFFGNLMDARKLSVCGEESFGT-GSDH-IREKDGIWAVLAWLSIVAH 473 (635)
Q Consensus 396 g~~~Vv~~v~ts~~ld~ia~~~G~~v~~t~vG~k~i~~~m~~~~~~~ggEesgg~-~~~~-~~~~Dgi~a~l~lle~la~ 473 (635)
+. .||.|+.||..++++++++|+++++|+||||||.++|.+.+++||||+|||+ +.++ ..++||+++++++||+|+.
T Consensus 299 ~~-~vv~~v~ss~~l~~~~~~~g~~~~~t~vG~k~i~~~m~~~~~~~ggE~SG~~~f~~~~~~~~Dgi~aal~lle~la~ 377 (485)
T 3uw2_A 299 GA-QIIYDVKCTRNLARWVREKGGEPLMWKTGHSLVKAKLRETGAPLAGEMSGHVFFKDRWYGFDDGLYTGARLLEILAR 377 (485)
T ss_dssp TC-EEEEETTSCTHHHHHHHHTTCEEEEECSSHHHHHHHHHHHCCSEEECTTSCEEETTTTCSSBCHHHHHHHHHHHHTT
T ss_pred CC-eEEEEeCCcHHHHHHHHHcCCEEEEEcCChHHHHHHHHhhcccceecccCcEeeccccCCCCcHHHHHHHHHHHHHh
Confidence 33 4999999999999999999999999999999999999999999999999998 6664 4579999999999999986
Q ss_pred hcCCCCCCCCCCCHHHHHHHHHHhhCcceeeecccccCChHHHHHHHHHHHhhccccccCCcCCCceeeecccCccCCCC
Q 006678 474 RNKDKKPGEKLISVSDVVKAHWATYGRNFFSRYDYEECESEGANKMIGYLRDLVSKSKAGDKYGNYVLQFADDFAYTDPV 553 (635)
Q Consensus 474 ~~~~~~~~~~~~tL~ell~~l~~~~g~~~~~r~~~~~~~~~~~~~vm~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~d~v 553 (635)
.+ +|+++++++|+.| ...+..+ .|+++.+.++|++|++..... +
T Consensus 378 ~~----------~lsel~~~lp~~~---~~~~~~v-~~~~~~~~~~~~~l~~~~~~~---~------------------- 421 (485)
T 3uw2_A 378 VA----------DPSALLNGLPNAV---STPELQL-KLEEGENVKLIDKLRADAKFD---G------------------- 421 (485)
T ss_dssp SS----------CHHHHHHTSCCCE---ECCCEEC-------CTHHHHHHHHSCCCT---T-------------------
T ss_pred cC----------CHHHHHHHhhHhh---CCceEEE-eCCchhHHHHHHHHHhhhccc---c-------------------
Confidence 43 7999988876532 1223455 588877889999998763200 0
Q ss_pred CCCCCCcCeEEEEEcCCeEEEEEeCCCCCCCCEEEEEEEeeCcChhhhHHHHHHHHHHHHHHHH
Q 006678 554 DGSVASKQGVRFVFTDGSRIIFRLSGTGSAGATVRIYIEQFEPDVSKHEMDAQSALKPLIDLAL 617 (635)
Q Consensus 554 ~~~i~~~dGiki~f~dGswvliRpSgTEP~~~~iriY~Ea~~~~~~~~~~~~~~~l~~~i~~~~ 617 (635)
..+++.+||||+.|+|| |++|||||||| ++|||+|+.+++..+ +..+.+..+|+.+.
T Consensus 422 ~~~~~~~DGvrv~~~~g-wvlvRpSgTEP---~lrv~~Ea~~~~~~~---~l~~~~~~~i~~~~ 478 (485)
T 3uw2_A 422 ADEVVTIDGLRVEYPDG-FGLARSSNTTP---VVVLRFEATSDAALA---RIQDDFRRALKAAK 478 (485)
T ss_dssp CSEEECSSSEEEEETTE-EEEEEECSSSS---SEEEEEEESSHHHHH---HHHHHHHHHHHHHS
T ss_pred cccccccceEEEEeCCc-EEEEEecCCCC---eEEEEEEeCCHHHHH---HHHHHHHHHHHHhc
Confidence 02456778999999987 99999999999 999999998765433 33445555665544
No 9
>2z0f_A Putative phosphoglucomutase; isomerase, magnesium, metal-binding, structural genomics; 2.52A {Thermus thermophilus}
Probab=100.00 E-value=2.9e-83 Score=719.77 Aligned_cols=483 Identities=23% Similarity=0.285 Sum_probs=365.0
Q ss_pred CCCCCCCcCccCCeeEE-ccccccHHHHHHHHHHHHHhCCCCCCCCCeEEEEecCCcCHHHHHHHHHHHHHhCCCeEEEE
Q 006678 86 TKPIEGQKTGTSGLRKK-VKVFKQENYLANWIQALFNSLPPEDYKNGHLVLGGDGRYFNKEAAQIIIKIAAGNGVGKIMV 164 (635)
Q Consensus 86 ~~~~~~~~FGt~GiRG~-~~v~~tp~~~~~~~~A~g~~l~~~~~~~~~VvVG~D~R~sS~~la~a~a~gL~s~Gv~V~~~ 164 (635)
+.++++++|||+||||+ ++..+|++++.++++|+|.++.+.. .+++|+||||+|.+|++++++++++|+++|++|+++
T Consensus 18 ~~~~~~~~FGT~GiRG~~~~~~lt~~~v~~i~~a~~~~l~~~~-~~~~VvIG~D~R~~S~~~~~~~~~gl~a~Gi~V~~~ 96 (524)
T 2z0f_A 18 QNPLEGVRFGTSGHRGSSLKATFTEAHVLAIAQAIAELRPSFG-ATGPLFLAKDTHALSEPAWATALSVFAAHGIEVRVE 96 (524)
T ss_dssp TCGGGSCCEETTEEEECGGGTSSCHHHHHHHHHHHHHHTTTTT-CCSCEEEEECSCTTHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCccCcCcccCccccCCcccCCCCHHHHHHHHHHHHHHHHHhC-CCCeEEEEeCCCcchHHHHHHHHHHHHHCCCEEEEe
Confidence 44567899999999996 5888999999999999999987321 235799999999999999999999999999999998
Q ss_pred CCCCccchHHHHHHHHhcc-----ccceeEEeccCCCCCCCCCceEEEEcCCCCCCChhHHHHHHhccccchhhhccCCC
Q 006678 165 GRDGIMSTPAVSAVIRKQK-----ANGGFIMSASHNPGGPEYDWGIKFNYSSGQPAPESITDKIYGNTLSISEIKMADIP 239 (635)
Q Consensus 165 ~~~G~~pTP~v~fav~~~~-----a~gGI~ITASHNP~~~~~~nGiK~~~~~G~~l~~~~~~~Ie~~~~~ie~~~~~~~~ 239 (635)
++.|++|||+++|++++++ |++|||||||||| ++||||||++++|.+++++++++|++.++.+.+....+++
T Consensus 97 ~~~G~~pTP~l~~av~~~~~~~~~a~~GImITASHNP---~~~NGiK~~~~~G~~~~~~~~~~Ie~~~~~~~~~~~~~~~ 173 (524)
T 2z0f_A 97 ADGDYTPTPLVSLAILEHNAHHEAKADGVLLTPSHNP---PEDGGFKYNPPTGGPANARITRAIEERANALLQEGLKGVK 173 (524)
T ss_dssp SSSSCCCHHHHHHHHHHHHTTCSSCCEEEEECC--CC---TTCEEEEEECTTSSCCCHHHHHHHHHHHHHHHHTTTTTCC
T ss_pred CCCCccCcHHHHHHHHHhCCCccccceEEEEcCCCCC---chhCCEEEECCCCCcCCHHHHHHHHHHHHhhccccccccc
Confidence 5558999999999999999 7999999999999 8999999999999999999999999865321100001223
Q ss_pred CCCcccccccccCCceeeecCchHHHHHHHHhhcCchhhhhhhcCCCcEEEEecCCCchhhchhHHHHHHcCCceeEeec
Q 006678 240 DVDLSSLGVTNFGNFSVEVVDPVSDYLELMENVFDFPLIRSLLSRSDFRFVFDAMHAVTGAYAKPIFVEKLGAKPDSILN 319 (635)
Q Consensus 240 ~~~~~~ig~~~~g~~~~~~~d~~~~Yi~~l~~~~~~~~I~~~~~~~~~kVvvD~~~Gaa~~~~~~lfl~~LG~~~~~~ln 319 (635)
+.+++..+ + .+...|..+.|++.+++.++.+.|+. +++|||+||+||+++.+++++| ++|||+++ ++|
T Consensus 174 ~~~~~~~~----~--~~~~~d~~~~Y~~~l~~~~~~~~i~~----~~lkivvd~~nG~~~~~~~~ll-~~lG~~v~-~v~ 241 (524)
T 2z0f_A 174 RLPLREAL----A--RAKPFDYAGLYVEKVAEAVDLEAIRA----SGLRIGVDPLGGASLRVWERLA-ESHGLPLE-VVN 241 (524)
T ss_dssp CCCHHHHH----H--HCEEECHHHHHHHHGGGTSCHHHHHH----SCCCEEEECTTSTTHHHHHHHH-HHHTCCEE-EC-
T ss_pred ccChhhhc----c--cccccchHHHHHHHHHHhcChhhhcc----CCCeEEEeCCCCchHHHHHHHH-HHcCCcEE-EEc
Confidence 33332221 1 13456889999999999988776664 6899999999999999999995 99999976 599
Q ss_pred cccCCCCCCCC--------CCCCchhHHHHHHHHHhccCCcEEEEecCCCCeEEEEeCCEEeCCCCHH-HHHHHHHHHhC
Q 006678 320 GVPLEDFGHGH--------PDPNLTYARDLVAIMYGENGPDFGAASDGDGDRNMILGKGFFVTPSDSV-AIIAANAQEAI 390 (635)
Q Consensus 320 ~~pd~~Fp~~~--------P~P~~~~l~~L~~~va~~~~adlGia~DgDgDRl~vvd~G~~l~~~d~l-alla~~ll~~~ 390 (635)
++|||+||.++ |+|..+. .+...++++.++|+|+++||||||++++++.++++ +|++ +|++.|+++..
T Consensus 242 ~~~d~~f~~~~~~~~g~~~p~p~~~~--~l~~~~~~~~~aDlgia~DgDaDR~~vvd~~~~l~-gd~i~alla~~l~~~~ 318 (524)
T 2z0f_A 242 PTLDPTFRFMPKDHDGKIRMDCSSPY--AMAGLLALKDRFDLAIGNDPDADRHGIVTPRGLMN-PNHYLAAALHHLYTTR 318 (524)
T ss_dssp --------------------------------CCCCCCCSSEEEEECTTSCSEEEEETTEECC-HHHHHHHHHHHHHTTC
T ss_pred CccCCCCCCCCCCCccccCCCCCChh--HHHHHHHhhcCCCEEEEeCCccccceEEecCceec-hhHHHHHHHHHHHHhc
Confidence 99999999765 4554432 33333435889999999999999999997558888 6666 77788876531
Q ss_pred CcCCCCCCeEEEeccChHHHHHHHHHCCCCeEEeecchHHHHHHHHhcCceEEEeccCCC-CCCC-----ccCCchHHHH
Q 006678 391 PYFKSGPKGLARSMPTSGALDRVAEKLKLPFFEVPTGWKFFGNLMDARKLSVCGEESFGT-GSDH-----IREKDGIWAV 464 (635)
Q Consensus 391 ~~~~~g~~~Vv~~v~ts~~ld~ia~~~G~~v~~t~vG~k~i~~~m~~~~~~~ggEesgg~-~~~~-----~~~~Dgi~a~ 464 (635)
.. ++ ..|+.+++||.+++++|+++|++++||+||||||.++|.+.+++||||||||+ +++| .+++||++++
T Consensus 319 -~~-~~-~~vv~t~vss~~l~~ia~~~G~~~~~t~tG~k~i~~~m~~~~~~~ggEeSgg~~~~~~~~~~~~~~~Dgi~aa 395 (524)
T 2z0f_A 319 -SW-PG-AKVGKTAVTSALLDRVAQALGREVYETPVGFKHFVAGLLEGWLGFAGEESAGASFLRFDGRPFSTDKDGILMG 395 (524)
T ss_dssp -CC-TT-CEEEEETTSCTHHHHHHHHTTCCEEEECSSTHHHHHHHHHSSEEEEEETTTEEEECCTTSCCSCSSCCHHHHH
T ss_pred -CC-CC-CeEEEecccHHHHHHHHHHhCceEEEcCCcHHHHHHHHhhCCcEEEEEccCcEEECCCCcccccccchHHHHH
Confidence 00 22 25889999999999999999999999999999999999999999999999997 6666 8999999999
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhhCcceeeecccccCChHHHHHHHHHHHhhccccccCCcCCCceeeec
Q 006678 465 LAWLSIVAHRNKDKKPGEKLISVSDVVKAHWATYGRNFFSRYDYEECESEGANKMIGYLRDLVSKSKAGDKYGNYVLQFA 544 (635)
Q Consensus 465 l~lle~la~~~~~~~~~~~~~tL~ell~~l~~~~g~~~~~r~~~~~~~~~~~~~vm~~l~~~~~~~~~~~~~~~~~i~~~ 544 (635)
++++|+++..++ +|+|++++||++||.+++.+.++ .|+++.+ .+|+++++....+..++ +.+|..+
T Consensus 396 l~~le~~a~~g~---------~L~ell~~l~~~~g~~~~~~~~~-~~~~~~k-~~~~~l~~~~~~~~~~~---~~~i~~~ 461 (524)
T 2z0f_A 396 LLAAELMAKRGQ---------APDALYEALAEKLGRPYYARKDL-PVSPEAK-ARLARLSAKEVHPSTLA---GEPVLQV 461 (524)
T ss_dssp HHHHHHHHHHSS---------CHHHHHHHHHHHHCCCEEEEEEE-ECCHHHH-HHHTTCCTTTSCCSEET---TEECCEE
T ss_pred HHHHHHHHHhCC---------CHHHHHHHHHHHhCcceeeeecc-cchHHHH-HHHHHHhhcCCChHHhC---CceeEEE
Confidence 999999999876 99999999999999888888877 4777655 47777755311112222 3344433
Q ss_pred ccCccCCCCCCCCCCcCeEEEEEcCCeEEEEEeCCCCCCCCEEEEEEEeeCcChhhhHHHHHHHHHHHHHH
Q 006678 545 DDFAYTDPVDGSVASKQGVRFVFTDGSRIIFRLSGTGSAGATVRIYIEQFEPDVSKHEMDAQSALKPLIDL 615 (635)
Q Consensus 545 ~~~~~~d~v~~~i~~~dGiki~f~dGswvliRpSgTEP~~~~iriY~Ea~~~~~~~~~~~~~~~l~~~i~~ 615 (635)
.+... +..+.+||||+.|+|| |++|||||||| +||+|+|+.+.+ +..++.++.+..+++.
T Consensus 462 ~~~~~-----g~~~~~dGlr~~~~~g-wvlvRpSgTEP---~irvy~Ea~~~~--~~~~~~~~~~~~~~~~ 521 (524)
T 2z0f_A 462 LDRAT-----GNGEPLGGIKVVAANA-WFAVRPSGTED---VAKVYAESFLGE--AHLERVLEEATALLHK 521 (524)
T ss_dssp EEECT-----TTCCEEEEEEEECSSE-EEEEEECSSSS---EEEEEEEESSCH--HHHHHHHHHHHHHHHH
T ss_pred EeccC-----CCCCCCCeEEEEECCe-EEEEEcCCCCC---EEEEEEEEeCCH--HHHHHHHHHHHHHHHH
Confidence 32211 2345689999999997 99999999999 999999995321 2234445555555543
No 10
>3pdk_A Phosphoglucosamine mutase; 4-domain architecture, mixed A/B fold, phosphohexomutase; 2.70A {Bacillus anthracis}
Probab=100.00 E-value=2.4e-81 Score=693.51 Aligned_cols=442 Identities=21% Similarity=0.246 Sum_probs=355.7
Q ss_pred CCCCCCCCcCccCCeeEEccccccHHHHHHHHHHHHHhCCCCCCCCCeEEEEecCCcCHHHHHHHHHHHHHhCCCeEEEE
Q 006678 85 PTKPIEGQKTGTSGLRKKVKVFKQENYLANWIQALFNSLPPEDYKNGHLVLGGDGRYFNKEAAQIIIKIAAGNGVGKIMV 164 (635)
Q Consensus 85 ~~~~~~~~~FGt~GiRG~~~v~~tp~~~~~~~~A~g~~l~~~~~~~~~VvVG~D~R~sS~~la~a~a~gL~s~Gv~V~~~ 164 (635)
....+.+.+|||+||||+++.++||+++.++++|+|.++.+. ..+++|+||||+|.+|++|++++++||+++|++|+++
T Consensus 17 ~~~~~m~~~FGt~GiRG~~~~~lt~~~v~~~g~a~~~~l~~~-~~~~~VvIG~D~R~ss~~~~~a~a~gl~s~Gi~V~~~ 95 (469)
T 3pdk_A 17 YKKAGMGKYFGTDGVRGVANKELTPELAFKIGRFGGYVLTKD-TDRPKVIIGRDTRISGHMLEGALVAGLLSTGAEVMRL 95 (469)
T ss_dssp ------CCSCBTTBEEEEBTTTBCHHHHHHHHHHHHHHHHTT-CSSCEEEEEECSCTTHHHHHHHHHHHHHTTTCEEEEE
T ss_pred hhhcCcccccCCCCeeeecCCCCCHHHHHHHHHHHHHHHHhh-CCCCeEEEEeCCCCCHHHHHHHHHHHHHHCCCEEEEe
Confidence 334445679999999999999999999999999999999632 2356899999999999999999999999999999999
Q ss_pred CCCCccchHHHHHHHHhccccceeEEeccCCCCCCCCCceEEEEcCCCCCCChhHHHHHHhccccchhhhccCCCCCCcc
Q 006678 165 GRDGIMSTPAVSAVIRKQKANGGFIMSASHNPGGPEYDWGIKFNYSSGQPAPESITDKIYGNTLSISEIKMADIPDVDLS 244 (635)
Q Consensus 165 ~~~G~~pTP~v~fav~~~~a~gGI~ITASHNP~~~~~~nGiK~~~~~G~~l~~~~~~~Ie~~~~~ie~~~~~~~~~~~~~ 244 (635)
|++|||+++|++++++++||||||||||| ++||||||++++|.+++++.+++|++.+++. . .++++..+.
T Consensus 96 ---g~~pTP~l~fav~~~~a~~GImITASHNP---~~~NGiK~~~~~G~~i~~~~~~~Ie~~~~~~--~--~~~~~~~~~ 165 (469)
T 3pdk_A 96 ---GVISTPGVAYLTKALDAQAGVMISASHNP---VQDNGIKFFGSDGFKLTDEQEAEIEALLDKE--V--DELPRPTGT 165 (469)
T ss_dssp ---EECCHHHHHHHHHHHTCSEEEEECCTTSC---TTEEEEEEEETTSSBCCHHHHHHHHHHHHSS--S--CCSCCCCGG
T ss_pred ---CCCChHHHHHHHHhcCCCeEEEEEeCCCc---chhCcEEEecCCCcCCCHHHHHHHHHHHhcc--c--cccCccccc
Confidence 99999999999999999999999999999 8999999999999999999999999887541 0 022333333
Q ss_pred cccccccCCceee-ecCchHHHHHHHHhhcCchhhhhhhcCCCcEEEEecCCCchhhchhHHHHHHcCCceeEeeccccC
Q 006678 245 SLGVTNFGNFSVE-VVDPVSDYLELMENVFDFPLIRSLLSRSDFRFVFDAMHAVTGAYAKPIFVEKLGAKPDSILNGVPL 323 (635)
Q Consensus 245 ~ig~~~~g~~~~~-~~d~~~~Yi~~l~~~~~~~~I~~~~~~~~~kVvvD~~~Gaa~~~~~~lfl~~LG~~~~~~ln~~pd 323 (635)
.+| .+. ..|..+.|++.+++.++. ..+++||||||+||+++.+++++| ++|||+++ .+|+.||
T Consensus 166 ~~g-------~~~~~~d~~~~Y~~~l~~~~~~-------~~~~lkivvD~~nG~~~~~~~~ll-~~lG~~v~-~l~~~pD 229 (469)
T 3pdk_A 166 NLG-------QVSDYFEGGQKYLQYIKQTVEE-------DFSGLHIALDCAHGATSSLAPYLF-ADLEADIS-TMGTSPN 229 (469)
T ss_dssp GSC-------CEEECTHHHHHHHHHHHTTCSS-------CCTTCEEEEECTTSTTTTHHHHHH-HHTTCEEE-EESCCCC
T ss_pred cCc-------cEEEcccHHHHHHHHHHHhcCc-------ccCCCEEEEECCCchHHHHHHHHH-HHcCCEEE-EECCCcC
Confidence 443 233 357889999999998874 136899999999999999999995 99999976 5999999
Q ss_pred CCCCCCCCCCCchhHHHHHHHHHhccCCcEEEEecCCCCeEEEEe-CCEEeCCCCHH-HHHHHHHHHhCCcCCCCCCeEE
Q 006678 324 EDFGHGHPDPNLTYARDLVAIMYGENGPDFGAASDGDGDRNMILG-KGFFVTPSDSV-AIIAANAQEAIPYFKSGPKGLA 401 (635)
Q Consensus 324 ~~Fp~~~P~P~~~~l~~L~~~va~~~~adlGia~DgDgDRl~vvd-~G~~l~~~d~l-alla~~ll~~~~~~~~g~~~Vv 401 (635)
|.||++.|+|. ++.++.+.+ ++.++|+|+++||||||++++| +|++++ ||++ +|++.|+++.. .. ++ ..||
T Consensus 230 g~f~n~~~~~~--~~~~l~~~v-~~~~adlgia~DgDaDR~~~vd~~G~~l~-gd~i~~Lla~~l~~~~-~l-~~-~~vv 302 (469)
T 3pdk_A 230 GMNINDGVGST--HPEVLAELV-KEKGADIGLAFDGDGDRLIAVDEKGNIVD-GDQIMFICAKYMKETG-QL-KH-NTVV 302 (469)
T ss_dssp SSCTTSSCSTT--STHHHHHHH-HHHTCSEEEEECTTSSBEEEEETTSCEEC-HHHHHHHHHHHHHHTT-CS-GG-GEEE
T ss_pred CCCCCCCCCCC--CHHHHHHHH-HhcCCcEEEEECCCCCeEEEECCCCcEEC-hhHHHHHHHHHHHHhC-CC-CC-CeEE
Confidence 99998766654 344566777 8889999999999999998885 789999 7777 67788876531 00 12 2499
Q ss_pred EeccChHHHHHHHHHCCCCeEEeecchHHHHHHHHhcCceEEEeccCCC-CCCCccCCchHHHHHHHHHHHHHhcCCCCC
Q 006678 402 RSMPTSGALDRVAEKLKLPFFEVPTGWKFFGNLMDARKLSVCGEESFGT-GSDHIREKDGIWAVLAWLSIVAHRNKDKKP 480 (635)
Q Consensus 402 ~~v~ts~~ld~ia~~~G~~v~~t~vG~k~i~~~m~~~~~~~ggEesgg~-~~~~~~~~Dgi~a~l~lle~la~~~~~~~~ 480 (635)
.|+.||.+++++++++|+++++|+||||||+++|.+.+++||||+|||+ +++|.+++||++++++++++++..++
T Consensus 303 ~tv~ss~~l~~~~~~~G~~~~~t~tG~k~i~~~m~~~~~~~ggE~SG~~~~~~~~~~~Dgi~aal~~le~l~~~g~---- 378 (469)
T 3pdk_A 303 STVMSNLGFYKALEANGITSDKTAVGDRYVMEEMKRGGYNLGGEQSGHIILLDYITTGDGMLSALQLVNIMKMTKK---- 378 (469)
T ss_dssp EETTSCHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHTCCEEECTTSBEEETTTCSSCCHHHHHHHHHHHHHHHTC----
T ss_pred EeecCcHHHHHHHHHcCCEEEEEcCchHHHHHHHhhcCCeEEEcccCCEecCCCCCCCCHHHHHHHHHHHHHHcCC----
Confidence 9999999999999999999999999999999999999999999999998 79999999999999999999998877
Q ss_pred CCCCCCHHHHHHHHHHhhCcceeeecccccCChHHHHHHHHH--HHhhccccccCCcCCCceeeecccCccCCCCCCCCC
Q 006678 481 GEKLISVSDVVKAHWATYGRNFFSRYDYEECESEGANKMIGY--LRDLVSKSKAGDKYGNYVLQFADDFAYTDPVDGSVA 558 (635)
Q Consensus 481 ~~~~~tL~ell~~l~~~~g~~~~~r~~~~~~~~~~~~~vm~~--l~~~~~~~~~~~~~~~~~i~~~~~~~~~d~v~~~i~ 558 (635)
+|+|+++++++ ++..+.+ |+++.+.++|+. +.+..
T Consensus 379 -----~Lsel~~~l~~----~~~~~~~---v~~~~k~~~~~~~~~~~~i------------------------------- 415 (469)
T 3pdk_A 379 -----PLSELAGEMTK----FPQLLVN---VRVTDKKLALENEKIKEII------------------------------- 415 (469)
T ss_dssp -----CHHHHHTTSCC----CCEEEEE---ECCSCHHHHTTCHHHHHHH-------------------------------
T ss_pred -----CHHHHHHHHhh----cCceEEE---EecCchhhhhccHHHHHHH-------------------------------
Confidence 99999988653 3333333 344455555532 11110
Q ss_pred CcCeEEEEE-cCCeEEEEEeCCCCCCCCEEEEEEEeeCcChhhhHHHHHHHHHHHHHHH
Q 006678 559 SKQGVRFVF-TDGSRIIFRLSGTGSAGATVRIYIEQFEPDVSKHEMDAQSALKPLIDLA 616 (635)
Q Consensus 559 ~~dGiki~f-~dGswvliRpSgTEP~~~~iriY~Ea~~~~~~~~~~~~~~~l~~~i~~~ 616 (635)
++++..+ +|| |+||||||||| ++|||+|+.+++..+ +..+.+.++|+..
T Consensus 416 --~~~~~~~~~~g-w~lvRpSgTEP---~lRv~~Ea~~~~~~~---~l~~~~~~~i~~~ 465 (469)
T 3pdk_A 416 --RVVEEEMNGDG-RILVRPSGTEP---LIRVMAEAPTQEVCD---AYVHRIVEVVKAE 465 (469)
T ss_dssp --HHHHHHCCSSC-EEEEECCSSSC---CEEEEEECSSHHHHH---HHHHHHHHHHHHH
T ss_pred --HHHheEeCCCc-EEEEEeCCCCC---EEEEEEEECCHHHHH---HHHHHHHHHHHHH
Confidence 1222223 454 99999999999 999999998765433 3333445555443
No 11
>3i3w_A Phosphoglucosamine mutase; csgid, IDP02164, isomerase, magne metal-binding, phosphoprotein, structural genomics; HET: SEP; 2.30A {Francisella tularensis subsp}
Probab=100.00 E-value=1.5e-80 Score=683.31 Aligned_cols=429 Identities=19% Similarity=0.258 Sum_probs=351.6
Q ss_pred CCcCccCCeeEEccc-cccHHHHHHHHHHHHHhCCCCCCCCC-eEEEEecCCcCHHHHHHHHHHHHHhCCCeEEEECCCC
Q 006678 91 GQKTGTSGLRKKVKV-FKQENYLANWIQALFNSLPPEDYKNG-HLVLGGDGRYFNKEAAQIIIKIAAGNGVGKIMVGRDG 168 (635)
Q Consensus 91 ~~~FGt~GiRG~~~v-~~tp~~~~~~~~A~g~~l~~~~~~~~-~VvVG~D~R~sS~~la~a~a~gL~s~Gv~V~~~~~~G 168 (635)
+.+|||+||||+++. ++||+++.++++|+|.++.+. ..+ +|+||||+|.+|++|++++++||+++|++|+++ |
T Consensus 2 ~~~FGt~GiRG~~~~g~lt~~~v~~~g~a~~~~l~~~--~~~~~VvVG~D~R~ss~~l~~a~~~gl~s~G~~V~~~---g 76 (443)
T 3i3w_A 2 AKYFGTDGIRGEVANSTITVEFTQKLGNAVGSLINQK--NYPKFVIVGQDTRSSGGFLKFALVSGLNAAGIDVLDL---G 76 (443)
T ss_dssp -CCCCSSSSEEEBSSSSBSHHHHHHHHHHHHHHHHHT--TCCSEEEEEECSCTTHHHHHHHHHHHHHHHTCEEEEE---E
T ss_pred CcccCCCCeeEEeCCCCCCHHHHHHHHHHHHHHHHhc--CCCCeEEEEeCCCcCHHHHHHHHHHHHHHCCCeEEEe---C
Confidence 468999999999999 899999999999999999632 134 899999999999999999999999999999999 9
Q ss_pred ccchHHHHHHHHhccccceeEEeccCCCCCCCCCceEEEEcCCCCCCChhHHHHHHhccccchhhhccCCCCCCcccccc
Q 006678 169 IMSTPAVSAVIRKQKANGGFIMSASHNPGGPEYDWGIKFNYSSGQPAPESITDKIYGNTLSISEIKMADIPDVDLSSLGV 248 (635)
Q Consensus 169 ~~pTP~v~fav~~~~a~gGI~ITASHNP~~~~~~nGiK~~~~~G~~l~~~~~~~Ie~~~~~ie~~~~~~~~~~~~~~ig~ 248 (635)
++|||+++|++++++++||||||||||| ++||||||++++|.+++++.+++|++.+++ ++++..+..+|
T Consensus 77 ~~pTP~~~~av~~~~a~~GImITASHNP---~~~NGiK~~~~~G~~l~~~~~~~Ie~~~~~-------~~~~~~~~~~g- 145 (443)
T 3i3w_A 77 VVPTPVVAFMTVKHRAAAGFVITASHNK---FTDNGIKLFSSNGFKLDDALEEEVEDMIDG-------DFIYQPQFKFG- 145 (443)
T ss_dssp ECCHHHHHHHHHHTTCSEEEEECCTTSC---TTEEEEEEEETTSCBCCHHHHHHHHHHHTS-------CCCCCTTSCCC-
T ss_pred CCCHHHHHHHHHhcCCCeEEEEEECCCC---chhCeEEEEcCCCCcCCHHHHHHHHHHHhc-------cccccccccCc-
Confidence 9999999999999999999999999999 899999999999999999999999988743 12233333443
Q ss_pred cccCCceee-ecCchHHHHHHHHhhcCchhhhhhhcCCCcEEEEecCCCchhhchhHHHHHHcCCceeEeeccccCCCCC
Q 006678 249 TNFGNFSVE-VVDPVSDYLELMENVFDFPLIRSLLSRSDFRFVFDAMHAVTGAYAKPIFVEKLGAKPDSILNGVPLEDFG 327 (635)
Q Consensus 249 ~~~g~~~~~-~~d~~~~Yi~~l~~~~~~~~I~~~~~~~~~kVvvD~~~Gaa~~~~~~lfl~~LG~~~~~~ln~~pd~~Fp 327 (635)
.+. ..|..+.|++++++.++. .|+ .++ ||||||+||+++.+++++| ++|||+++ .+|++|||.||
T Consensus 146 ------~~~~~~d~~~~Y~~~l~~~~~~-~i~----~~~-kivvD~~nG~~~~~~~~ll-~~lG~~v~-~~~~~pDg~f~ 211 (443)
T 3i3w_A 146 ------SYKILANAIDEYIESIYSRFAK-FVN----YKG-KVVVDCAHGAASHNFEALL-DKFGINYV-SIASNPDGLNI 211 (443)
T ss_dssp ------CEEECTTTTHHHHHHHHHHHTT-TCC----CCS-EEEEECTTSTTTTHHHHHH-HHTTCEEE-ESSCCCCSSCT
T ss_pred ------cEEEChhHHHHHHHHHHHhCch-hhc----cCC-eEEEECCCChHHHHHHHHH-HHcCCEEE-EECCccCCCCC
Confidence 233 347899999999998873 222 357 9999999999999999995 99999976 59999999999
Q ss_pred CCCCCCCchhHHHHHHHHHhccCCcEEEEecCCCCeEEEEe-CCEEeCCCCHH-HHHHHHHHHhCCcCCCCCCeEEEecc
Q 006678 328 HGHPDPNLTYARDLVAIMYGENGPDFGAASDGDGDRNMILG-KGFFVTPSDSV-AIIAANAQEAIPYFKSGPKGLARSMP 405 (635)
Q Consensus 328 ~~~P~P~~~~l~~L~~~va~~~~adlGia~DgDgDRl~vvd-~G~~l~~~d~l-alla~~ll~~~~~~~~g~~~Vv~~v~ 405 (635)
++.|+|.. +..+.+.+ +++++|+|+++||||||++++| +|++++ +|++ +|++.|+++. .+. ..||.|+.
T Consensus 212 n~~~~~~~--~~~l~~~v-~~~~adlgia~DgDaDR~~~vd~~G~~l~-gd~i~~lla~~l~~~----~~~-~~vv~tv~ 282 (443)
T 3i3w_A 212 NVGCGATC--VSNIKKAV-KEQKADLGISLDGDADRIIIVDENGQEID-GDGILNILAQYSDIC----GGT-NGIVGTQM 282 (443)
T ss_dssp TTTCSTTC--HHHHHHHH-HHHTCSEEEEECTTSCBEEEECTTSCEEC-HHHHHHHHHHTTTTT----TCC-SCEEEETT
T ss_pred CCCCCCCC--HHHHHHHH-HhcCCcEEEEECCCCceEEEECCCCcEeC-hhHHHHHHHHHHHHh----CCC-CeEEEeec
Confidence 88877753 45567777 8899999999999999999995 789999 7887 6777776532 222 34999999
Q ss_pred ChHHHHHHHHHCCCCeEEeecchHHHHHHHHhcCceEEEeccCCC-CCCCccCCchHHHHHHHHHHHHHhcCCCCCCCCC
Q 006678 406 TSGALDRVAEKLKLPFFEVPTGWKFFGNLMDARKLSVCGEESFGT-GSDHIREKDGIWAVLAWLSIVAHRNKDKKPGEKL 484 (635)
Q Consensus 406 ts~~ld~ia~~~G~~v~~t~vG~k~i~~~m~~~~~~~ggEesgg~-~~~~~~~~Dgi~a~l~lle~la~~~~~~~~~~~~ 484 (635)
||.+++++++++|+++++|+||||||+++|.+.++++|||+|||+ +++|.+++||++++++++++|+..++
T Consensus 283 ss~~l~~~~~~~G~~~~~t~~G~k~i~~~m~~~~~~~ggE~SG~~~~~~~~~~~Dgi~a~l~~le~l~~~g~-------- 354 (443)
T 3i3w_A 283 TNMSYENHYRANKIPFIRSKVGDRYVLEDLVKYGYKIGGESSGHVINLNFGTTGDGLFTAIQLLAIFSQADK-------- 354 (443)
T ss_dssp SCHHHHHHHHHTTCCEEEESSSTTHHHHHHHHHTCCEEECTTSBEEETTTCSSCCHHHHHHHHHHHTTTCSS--------
T ss_pred CchHHHHHHHHCCCeEEEEeChHHHHHHHHhhcCcEEEEEeeCcEEEcCcCcCCCHHHHHHHHHHHHHHcCC--------
Confidence 999999999999999999999999999999999999999999998 79999999999999999999987766
Q ss_pred CCHHHHHHHHHHhhCcceeeecccccCC----hHHHHHHHHHHHhhccccccCCcCCCceeeecccCccCCCCCCCCCCc
Q 006678 485 ISVSDVVKAHWATYGRNFFSRYDYEECE----SEGANKMIGYLRDLVSKSKAGDKYGNYVLQFADDFAYTDPVDGSVASK 560 (635)
Q Consensus 485 ~tL~ell~~l~~~~g~~~~~r~~~~~~~----~~~~~~vm~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~d~v~~~i~~~ 560 (635)
+|+|++++++ .++..+.++ .|+ +....++.+.+.+. .
T Consensus 355 -~Lsel~~~~~----~~p~~~~~v-~~~~~~~~~~~~~~~~~i~~~--~------------------------------- 395 (443)
T 3i3w_A 355 -PVSEFKLQGE----LMQQTLINV-PLTKKVAREDLQKVASDVNDV--E------------------------------- 395 (443)
T ss_dssp -CGGGTSCSSC----CCEEEEEEE-ECSSCCCHHHHHTTHHHHHHH--H-------------------------------
T ss_pred -CHHHHHHhhh----hhcceEEEE-EcCcccchhhHHHHHHHHHHH--H-------------------------------
Confidence 9999887754 455555555 353 33333444433322 0
Q ss_pred CeEEEEEcCCeEEEEEeCCCCCCCCEEEEEEEeeCcChhhhHHHHHHHHHHHHHH
Q 006678 561 QGVRFVFTDGSRIIFRLSGTGSAGATVRIYIEQFEPDVSKHEMDAQSALKPLIDL 615 (635)
Q Consensus 561 dGiki~f~dGswvliRpSgTEP~~~~iriY~Ea~~~~~~~~~~~~~~~l~~~i~~ 615 (635)
..+.+++|+||||||||| +||||+|+.+++..+ +..+.+..+|+.
T Consensus 396 ----~~~~~~gw~lvR~SgTEP---~~rv~~Ea~~~~~~~---~l~~~~~~~i~~ 440 (443)
T 3i3w_A 396 ----KRLGNRGRVLLRPSGTEP---VLRVMVEADDKSLAT---NEAEYLVEKVKQ 440 (443)
T ss_dssp ----HHHGGGEEEEEEEETTEE---EEEEEEEESSHHHHH---HHHHHHHHHHHH
T ss_pred ----HhcCCCcEEEEecCCCCc---eEEEEEEECCHHHHH---HHHHHHHHHHHH
Confidence 001233599999999999 999999998765433 333344555554
No 12
>4hjh_A Phosphomannomutase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: SEP G6Q; 2.10A {Brucella melitensis BV}
Probab=100.00 E-value=7.8e-79 Score=676.70 Aligned_cols=443 Identities=19% Similarity=0.243 Sum_probs=355.2
Q ss_pred CCCCcCccCCeeEEccccccHHHHHHHHHHHHHhCCCCC--CCCCeEEEEecCCcCHHHHHHHHHHHHHhCCCeEEEECC
Q 006678 89 IEGQKTGTSGLRKKVKVFKQENYLANWIQALFNSLPPED--YKNGHLVLGGDGRYFNKEAAQIIIKIAAGNGVGKIMVGR 166 (635)
Q Consensus 89 ~~~~~FGt~GiRG~~~v~~tp~~~~~~~~A~g~~l~~~~--~~~~~VvVG~D~R~sS~~la~a~a~gL~s~Gv~V~~~~~ 166 (635)
.+++.|||+||||++ .++|++++.++++|+|.++.+.. .++++|+||||+|.+|++|+++++++|+++|++|+++
T Consensus 7 ~~~~~FGT~GiRG~~-~~lt~~~v~~~~~a~a~~l~~~~~~~~~~~VvVG~D~R~ss~~~~~a~~~gl~a~Gi~V~~~-- 83 (481)
T 4hjh_A 7 SNSLKFGTSGLRGLA-VELNGLPAYAYTMAFVQMLAAKGQLQKGDKVFVGRDLRPSSPDIAALAMGAIEDAGFTPVNC-- 83 (481)
T ss_dssp -CCCEECSSSEEEEH-HHHTTHHHHHHHHHHHHHHHHTTSCCTTCEEEEEECSSTTHHHHHHHHHHHHHHTTCEEEEE--
T ss_pred cccCcccCCCcceec-CCCCHHHHHHHHHHHHHHHHhhccccCCCeEEEeecCCcCHHHHHHHHHHHHHHCCCEEEEe--
Confidence 357899999999999 78999999999999999984211 2356899999999999999999999999999999999
Q ss_pred CCccchHHHHHHHHhccccceeEEeccCCCCCCCCCceEEEEcCCCCCCChhHHHHHHhccccchhhhccCCCCC-C-cc
Q 006678 167 DGIMSTPAVSAVIRKQKANGGFIMSASHNPGGPEYDWGIKFNYSSGQPAPESITDKIYGNTLSISEIKMADIPDV-D-LS 244 (635)
Q Consensus 167 ~G~~pTP~v~fav~~~~a~gGI~ITASHNP~~~~~~nGiK~~~~~G~~l~~~~~~~Ie~~~~~ie~~~~~~~~~~-~-~~ 244 (635)
|++|||+++|+++++++ +|||||||||| ++||||||++++|.+ .++.+++|++.+.. + ++. + ..
T Consensus 84 -g~~pTP~l~fav~~~~~-~GImITASHNP---~~~NGiK~~~~~G~~-~~~~e~~I~~~~~~---~-----~~~~~~~~ 149 (481)
T 4hjh_A 84 -GVLPTPALSYYAMGAKA-PSIMVTGSHIP---DDRNGLKFYRRDGEI-DKDDEAAISAAYRK---L-----PAILAARK 149 (481)
T ss_dssp -EECCHHHHHHHHHHTTC-CEEEECCTTSC---TTEEEEEEEETTEEC-CHHHHHHHHHHHHT---C-----CC-CCCCC
T ss_pred -CCcCcHHHHHHHHhcCC-ceEEEecCCCC---CCCCCEEEeCCCCCC-CCHHHHHHHHHHhh---h-----cccccccc
Confidence 99999999999999998 79999999999 799999999999965 46667778776532 1 111 0 00
Q ss_pred cccccccCCceeeecCchHH-HHHHHHhhcCchhhhhhhcCCCcEEEEecCCCchhhchhHHHHHHcCCceeEeeccccC
Q 006678 245 SLGVTNFGNFSVEVVDPVSD-YLELMENVFDFPLIRSLLSRSDFRFVFDAMHAVTGAYAKPIFVEKLGAKPDSILNGVPL 323 (635)
Q Consensus 245 ~ig~~~~g~~~~~~~d~~~~-Yi~~l~~~~~~~~I~~~~~~~~~kVvvD~~~Gaa~~~~~~lfl~~LG~~~~~~ln~~pd 323 (635)
.+| . ...|..+. |++.+.+.++.+.+ +++||||||+||+++.+++++| ++|||+++ .+|+ +
T Consensus 150 ~~g-----~---~~~d~~~~~Yi~~~~~~~~~~~~------~~lkivvd~~~Ga~~~~~~~~l-~~lG~~v~-~l~~--~ 211 (481)
T 4hjh_A 150 HVG-----S---TETDAALQAYADRYAGFLGKGSL------NGLRVGVYQHSSVARDLLMYLL-TTLGVEPV-ALGR--S 211 (481)
T ss_dssp CCC-----S---CCCCHHHHHHHHHHHHHHCTTTT------TTCEEEEEEETCTTHHHHHHHH-HHTTCEEE-EEEE--C
T ss_pred ccC-----c---ccccccHHHHHHHHHHhcCcccc------cCCEEEEECCCChHHHHHHHHH-HHcCCeEE-EecC--C
Confidence 222 1 23577888 99999998876443 4799999999999999999995 99999976 4775 5
Q ss_pred CCCCCCCCCCCc-hhHHHHHHHHHhccCCcEEEEecCCCCeEEEEe-CCEEeCCCCHHHHH-HHHHHHhCCcCCCCCCeE
Q 006678 324 EDFGHGHPDPNL-TYARDLVAIMYGENGPDFGAASDGDGDRNMILG-KGFFVTPSDSVAII-AANAQEAIPYFKSGPKGL 400 (635)
Q Consensus 324 ~~Fp~~~P~P~~-~~l~~L~~~va~~~~adlGia~DgDgDRl~vvd-~G~~l~~~d~lall-a~~ll~~~~~~~~g~~~V 400 (635)
++|++++|+|.. +++..+.+.+ +++++|+|+++||||||++++| +|++++ +|++++| +.|+ .. ..|
T Consensus 212 ~~f~~~~~~p~~~e~l~~l~~~v-~~~~aDlgia~DgDaDR~~vvd~~G~~i~-gd~l~~L~a~~l-------~~--~~v 280 (481)
T 4hjh_A 212 DIFVPVDTEALRPEDIALLAQWG-KSDRLDAIVSTDGDADRPLIADEHGQFVR-GDLAGAITATWV-------GA--DTL 280 (481)
T ss_dssp SSCCCCCTTSCCHHHHHHHHHHH-TSTTCSEEEEECTTSSSEEEECTTSCEEC-HHHHHHHHHHHT-------TC--SEE
T ss_pred CCCCCCCCCCCCHHHHHHHHHHH-HhcCCCEEEEECCCCCceEEEcCCCCEEC-hHHHHHHHHHHh-------hc--CcE
Confidence 789999888854 5888999999 9999999999999999999996 799999 7888544 4544 12 248
Q ss_pred EEeccChHHHHHHHHHCCCCeEEeecchHHHHHHHHh-----cCceEEEeccCCC-CCC----------CccCCchHHHH
Q 006678 401 ARSMPTSGALDRVAEKLKLPFFEVPTGWKFFGNLMDA-----RKLSVCGEESFGT-GSD----------HIREKDGIWAV 464 (635)
Q Consensus 401 v~~v~ts~~ld~ia~~~G~~v~~t~vG~k~i~~~m~~-----~~~~~ggEesgg~-~~~----------~~~~~Dgi~a~ 464 (635)
+.++.||.+++++ +| ++++|+|||+||.++|++ .++++|||||||+ +.+ |.+++||++++
T Consensus 281 v~~v~ss~~l~~~---~~-~~~~t~vG~~~i~~~m~~~~~~g~~~~~GgEeSgg~~~~~~~~~d~~~~~~~~~~Dgi~a~ 356 (481)
T 4hjh_A 281 VTPVTSNTALESR---FP-KVLRTRVGSPYVIASMAQVSTGNSGPVIGFEANGGVLLGSTVERNGRSLTALPTRDALLPI 356 (481)
T ss_dssp EEETTSCTTHHHH---CS-CEEEECSSHHHHHHHHHHCC----CCEEEECTTCCEEECSCEEETTEEECCEEEEESHHHH
T ss_pred EEEEcChHHHHHh---cC-ceEEeccchHHHHHHHHHhhccCCCeEEEEeCCCCEEECchhcccccccccCCCccHHHHH
Confidence 8999999999887 56 999999999999999998 4789999999998 554 35689999999
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhhCcceeeecccccCChHHHHHHHHHHHhhccccccCCcCCCceeeec
Q 006678 465 LAWLSIVAHRNKDKKPGEKLISVSDVVKAHWATYGRNFFSRYDYEECESEGANKMIGYLRDLVSKSKAGDKYGNYVLQFA 544 (635)
Q Consensus 465 l~lle~la~~~~~~~~~~~~~tL~ell~~l~~~~g~~~~~r~~~~~~~~~~~~~vm~~l~~~~~~~~~~~~~~~~~i~~~ 544 (635)
+++||+++..++ +|+|++++||++|+ +..+. ..|+++.+.++|++|++... +..+....+ .+
T Consensus 357 l~~le~~a~~g~---------~Lsell~~l~~~~~--~~~~~--~~~~~~~~~~~m~~l~~~~~-~~~~~~~~g-~~--- 418 (481)
T 4hjh_A 357 LACLATVHEKKT---------PLSTIARSYGFRVA--LSDRL--QNIPQEASTAFLALLEDADK-RASLFPAGD-AI--- 418 (481)
T ss_dssp HHHHHHHHHHTC---------CHHHHHHTTCCCEE--EEEEE--ESCCHHHHHHHHHHTTSHHH-HHHHSCTTS-CE---
T ss_pred HHHHHHHHHcCC---------CHHHHHHHHHHHhC--Cceee--cCCCHHHHHHHHHHHHhcCC-hHHHHhhcC-cc---
Confidence 999999998877 99999999998776 23333 25889999999999976610 100000000 01
Q ss_pred ccCccCCCCCCCCCCcCeEEEEEcCCeEEEEEeCCCCCCCCEEEEEEEeeCcChhhhHHHHHHHHHHHHHH
Q 006678 545 DDFAYTDPVDGSVASKQGVRFVFTDGSRIIFRLSGTGSAGATVRIYIEQFEPDVSKHEMDAQSALKPLIDL 615 (635)
Q Consensus 545 ~~~~~~d~v~~~i~~~dGiki~f~dGswvliRpSgTEP~~~~iriY~Ea~~~~~~~~~~~~~~~l~~~i~~ 615 (635)
.+++.+||||+.|+||+|++|||||||| +||+|+|+.+++..+ +..+.+.++|+.
T Consensus 419 ----------~~v~~~DGlri~~~dg~wvlvRpSgTEP---~lrvy~Ea~s~e~~~---~l~~~~~~~i~~ 473 (481)
T 4hjh_A 419 ----------VRVETIDGVKLFFQSGNAVHYRASGNAP---ELRCYVESSDDTQAA---KLQALGLEIARK 473 (481)
T ss_dssp ----------EEEECSSSEEEEETTSCEEEEEECSSSS---EEEEEEEESSHHHHH---HHHHHHHHHHHH
T ss_pred ----------ccccCCCeEEEEecCCcEEEEecCCCCc---eEEEEEEeCCHHHHH---HHHHHHHHHHHH
Confidence 2356788999999999999999999999 999999998765443 223344445544
No 13
>2dka_A Phosphoacetylglucosamine mutase; isomerase; 1.93A {Candida albicans} PDB: 2dkc_A* 2dkd_A*
Probab=100.00 E-value=8.3e-58 Score=514.47 Aligned_cols=398 Identities=19% Similarity=0.155 Sum_probs=273.1
Q ss_pred CCCCcCccCCeeEEccccccHHHHHHHHHHHHHhCCCCCCCCCeEEEEecCCcCHHHHHHHHHHHHHhCCCeEEEECCCC
Q 006678 89 IEGQKTGTSGLRKKVKVFKQENYLANWIQALFNSLPPEDYKNGHLVLGGDGRYFNKEAAQIIIKIAAGNGVGKIMVGRDG 168 (635)
Q Consensus 89 ~~~~~FGt~GiRG~~~v~~tp~~~~~~~~A~g~~l~~~~~~~~~VvVG~D~R~sS~~la~a~a~gL~s~Gv~V~~~~~~G 168 (635)
..+..|||+|+||.. ++||+++.++++|+|.-
T Consensus 19 ~~~~~fGt~G~RG~~--~~~~~~~~~~g~a~~~r---------------------------------------------- 50 (544)
T 2dka_A 19 GVTFTYGTAGFRMKA--DKLDYVTFTVGIIASLR---------------------------------------------- 50 (544)
T ss_dssp SCCCCCBTTBEEEEG--GGCHHHHHHHHHHHHHH----------------------------------------------
T ss_pred CCeeEeCCCCccccc--ccCHHHHHHHHHHHHHH----------------------------------------------
Confidence 357899999999988 68999999999998850
Q ss_pred ccchHHHHHHHHhcc-ccceeEEeccCCCCCCCCCceEEEEcCCCCCCChhHH---------------------HHHHhc
Q 006678 169 IMSTPAVSAVIRKQK-ANGGFIMSASHNPGGPEYDWGIKFNYSSGQPAPESIT---------------------DKIYGN 226 (635)
Q Consensus 169 ~~pTP~v~fav~~~~-a~gGI~ITASHNP~~~~~~nGiK~~~~~G~~l~~~~~---------------------~~Ie~~ 226 (635)
+++++ +++|||||||||| ++||||||++++|.+++++++ ++|++.
T Consensus 51 ----------~~~~~~~~~GImITASHNP---~~dNGiK~~~~~G~~l~~~~e~~~~~~an~~~~~~~~~~~~~~~I~~~ 117 (544)
T 2dka_A 51 ----------SKYLQGKTVGVMITASHNP---PEDNGVKVVDPLGSMLESSWEKYATDLANASPSPSNDSEGEKNSLVEV 117 (544)
T ss_dssp ----------HHHTTTCEEEEEECCC-CC---TTEEEEEEECTTSSBCCGGGHHHHHHHHHSBSCC------CTTBHHHH
T ss_pred ----------HHhcCCcCceEEEeCCCCC---cccCceeeecCCCCcCCHHHHHHHHHHhcccccccccccchHHHHHHH
Confidence 46777 9999999999999 899999999999999999988 666653
Q ss_pred cccchhhhccCCC-------------CCCccc-----------c-cc--cccCCceeeec---------------C-chH
Q 006678 227 TLSISEIKMADIP-------------DVDLSS-----------L-GV--TNFGNFSVEVV---------------D-PVS 263 (635)
Q Consensus 227 ~~~ie~~~~~~~~-------------~~~~~~-----------i-g~--~~~g~~~~~~~---------------d-~~~ 263 (635)
+..+-+ ..+++ |..... + |. ...|. +..+ + ..+
T Consensus 118 i~~~~~--~~~~~~~~~~~v~vg~d~r~s~~~l~~al~~gl~~~~G~~v~~~G~--~ttP~l~~~v~~~~~~~~g~~~~~ 193 (544)
T 2dka_A 118 IKNLVS--DLKIDLSIPANVVIARDSRESSPALSMATIDGFQSVPNTKYQDFGL--FTTPELHYVTRTLNDPDFGKPTED 193 (544)
T ss_dssp HHHHHH--HTTCCTTSCEEEEEEECSCTTHHHHHHHHHHHHHTSSSEEEEEEEE--CCHHHHHHHHHHHHCGGGCCSSHH
T ss_pred HHHHHh--hhcCCcccCceEEeccCCCCCCHHHHHHHHhhhhhhcCCeEEEecc--cccchheeeeeeccccccCCccHH
Confidence 222100 00111 111100 1 11 00000 0000 3 678
Q ss_pred HHHHHHHhhcCc-hhhhhhhcCCCcEEEEecCCCchhhchhHHHHHHc--CCceeEeecccc-CCCCCCCCCCCCch-hH
Q 006678 264 DYLELMENVFDF-PLIRSLLSRSDFRFVFDAMHAVTGAYAKPIFVEKL--GAKPDSILNGVP-LEDFGHGHPDPNLT-YA 338 (635)
Q Consensus 264 ~Yi~~l~~~~~~-~~I~~~~~~~~~kVvvD~~~Gaa~~~~~~lfl~~L--G~~~~~~ln~~p-d~~Fp~~~P~P~~~-~l 338 (635)
.|++.+.+.++. ..+. .++.+++||||||+||+++.+++++|+++| ||+++ ++|++| |++|++++|+|..+ .+
T Consensus 194 ~Y~~~l~~~~~~~~~~~-~~~~~~lkIvvD~~nGag~~~~~~i~l~~L~~G~~v~-~ln~~~dd~~~~n~~~~~~~~~~~ 271 (544)
T 2dka_A 194 GYYSKLAKSFQEIYTIC-ESNNEKIDITIDAANGVGAPKIQELLEKYLHKEISFT-VVNGDYKQPNLLNFDCGADYVKTN 271 (544)
T ss_dssp HHHHHHHHHHHHHHTC------CCEEEEEECTTSTHHHHHHHHHHHHSTTTEEEE-EESCCTTCGGGTTSSCSHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhh-hccCCCCEEEEECCCcHHHHHHHHHHHHHhcCCceEE-EEcCcCCCCCcCCCCCCccchhhh
Confidence 999999988641 1111 011247999999999999999999933999 89876 699999 79999998887543 22
Q ss_pred HHHHHHHHhccCCcEEEEecCCCCeEEEE--e-CC--EEeCCCCHH-HHHHHHHHHhCCcCC----CCCCeEEEeccChH
Q 006678 339 RDLVAIMYGENGPDFGAASDGDGDRNMIL--G-KG--FFVTPSDSV-AIIAANAQEAIPYFK----SGPKGLARSMPTSG 408 (635)
Q Consensus 339 ~~L~~~va~~~~adlGia~DgDgDRl~vv--d-~G--~~l~~~d~l-alla~~ll~~~~~~~----~g~~~Vv~~v~ts~ 408 (635)
..+.+.+ ....+|+|+++||||||++++ | +| ++++ ||++ +|++.|+++..+... ....+||.|+.||.
T Consensus 272 ~~~~~~~-~~~~aDlGiA~DgDaDR~~iv~~D~~G~~~~l~-gd~i~aLla~~l~~~~~~~~~~~~~~~~~vv~tv~sn~ 349 (544)
T 2dka_A 272 QKLPKNV-KPVNNKLYASFDGDADRLICYYQNNDNKFKLLD-GDKLSTLFALFLQQLFKQIDPTKISLNIGVVQTAYANG 349 (544)
T ss_dssp CSCCTTC-CCCBTCCEEEECTTSCCEEEEEECTTSCEEEEC-HHHHHHHHHHHHHHHHTTSCTTTCCCCEEEEECTTSCH
T ss_pred hhhhhhh-hcccccEEEEECCCCCceEEEEEcCCCCeEEeC-HHHHHHHHHHHHHHhcccCCCcccccCCcEEEEecccc
Confidence 3333344 556789999999999999887 5 68 5899 7776 677888876532211 01225899977555
Q ss_pred HH-HHHHHHCCCCeEEeecchHHHHHHHHhcCceEEEeccCC--C-CCCCc-----------------------------
Q 006678 409 AL-DRVAEKLKLPFFEVPTGWKFFGNLMDARKLSVCGEESFG--T-GSDHI----------------------------- 455 (635)
Q Consensus 409 ~l-d~ia~~~G~~v~~t~vG~k~i~~~m~~~~~~~ggEesgg--~-~~~~~----------------------------- 455 (635)
.+ +.+++++|+++++|||||||++++|.+.++.+|||+||| + |++|.
T Consensus 350 ~~~~~i~~~~G~~v~~t~vG~k~v~~~m~~~~~~~ggE~sGhg~~if~~~~~~~~~~~~~~~~~~kd~~~~~~~~~~l~a 429 (544)
T 2dka_A 350 SSTKYVEDVLKIPVRCTPTGVKHLHHEAENFDIGVYFEANGHGTVIFNPEAEKKIFDYKPNNDNEAKAIKVLQNFSQLIN 429 (544)
T ss_dssp HHHHHHHHTSCCCEEECCSSHHHHHHHHTTSSEEEEECTTSCEEEEECHHHHHHHHHCCCSSHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHcCCceEEEeCcHHHHHHHHHhcCCcEEEcccCCeeEEECchhhhhhcccccCChhHHHHHHHHHHHHHHhh
Confidence 55 555555999999999999999999999999999999999 7 67773
Q ss_pred -cCCchHHHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhhCcceeeecccccCChHHHHHHHHHHHhhccccccCC
Q 006678 456 -REKDGIWAVLAWLSIVAHRNKDKKPGEKLISVSDVVKAHWATYGRNFFSRYDYEECESEGANKMIGYLRDLVSKSKAGD 534 (635)
Q Consensus 456 -~~~Dgi~a~l~lle~la~~~~~~~~~~~~~tL~ell~~l~~~~g~~~~~r~~~~~~~~~~~~~vm~~l~~~~~~~~~~~ 534 (635)
..+||+.++++++++++..++ +|++++..+ ..++.....+ .|.+..+.++|+..+
T Consensus 430 ~~tgd~l~~~l~vl~~~~~~g~---------~lsel~~~~----~~~p~~~~~v-~v~~~~~~~~~~~~~---------- 485 (544)
T 2dka_A 430 QTVGDAISDLLAVLIVVHYLKL---------SPSDWDNEY----TDLPNKLVKV-IVPDRSIFKTTNAER---------- 485 (544)
T ss_dssp SSSCCHHHHHHHHHHHHHHTTC---------CHHHHHTTS----CCCCEEEEEC--------CCCCTTTC----------
T ss_pred cccCCCHHHHHHHHHHHHHhCC---------CHHHHHhhh----hccCchhhcc-ccchhhhhhHHHhhh----------
Confidence 457888888888888887776 788877653 3344444443 344332111111100
Q ss_pred cCCCceeeecccCccCCCCCCCCCCcCeEEEEEcCCeEEEEEeCCCCCCCCEEEEEEEeeCcC
Q 006678 535 KYGNYVLQFADDFAYTDPVDGSVASKQGVRFVFTDGSRIIFRLSGTGSAGATVRIYIEQFEPD 597 (635)
Q Consensus 535 ~~~~~~i~~~~~~~~~d~v~~~i~~~dGiki~f~dGswvliRpSgTEP~~~~iriY~Ea~~~~ 597 (635)
.+ .+| +..++.+||+|+.|++| |++|||||||| ++|||+|+.+++
T Consensus 486 -----------~~--~~~-~~~~~~iDGv~~~~~~g-w~lvRpSGTEP---~lRvy~Ea~~~e 530 (544)
T 2dka_A 486 -----------TL--VEP-KGMQDEIDKLVAQYPNG-RSFVRASGTED---AVRVYAEADTQN 530 (544)
T ss_dssp ------------C--C-C-TTHHHHHHHHHTTSTTC-EEEEEEC-------CEEEEEECSSHH
T ss_pred -----------hh--cCc-hhhhcccceEEEEcCCE-EEEEEcCCCCC---EEEEEEEeCCHH
Confidence 00 111 13456789999999876 99999999999 999999998654
No 14
>1wjw_A Phosphoacetylglucosamine mutase; carbohydrate metabolism, structural genomics, riken structural genomics/proteomics initiative, RSGI, isomerase; NMR {Mus musculus} SCOP: d.129.2.1
Probab=98.97 E-value=1.3e-11 Score=109.86 Aligned_cols=38 Identities=26% Similarity=0.306 Sum_probs=33.0
Q ss_pred CCCCcCeEEEEEcCCeEEEEEeCCCCCCCCEEEEEEEeeCcC
Q 006678 556 SVASKQGVRFVFTDGSRIIFRLSGTGSAGATVRIYIEQFEPD 597 (635)
Q Consensus 556 ~i~~~dGiki~f~dGswvliRpSgTEP~~~~iriY~Ea~~~~ 597 (635)
.++.+||+|+.|+| +|++|||||||| +||||+|+.+.+
T Consensus 43 ~~~~idgl~~~~~~-gwvlvRpSGTEP---~irvy~Ea~~~~ 80 (112)
T 1wjw_A 43 LQEAINDLVKKYTL-ARAFVRPSGTED---IVRVYAEANSQE 80 (112)
T ss_dssp HHHHHHHHHHHSSS-EEEEEECSSSSS---SEEEEEEESSHH
T ss_pred hhhhhhcEEEEcCC-cEEEEEeCCCcc---EEEEEEEECCHH
Confidence 45678899999966 499999999999 999999997643
No 15
>2dka_A Phosphoacetylglucosamine mutase; isomerase; 1.93A {Candida albicans} PDB: 2dkc_A* 2dkd_A*
Probab=96.85 E-value=0.00091 Score=74.94 Aligned_cols=52 Identities=17% Similarity=0.175 Sum_probs=48.3
Q ss_pred CCeEEEEecCCcCHHHHHHHHHHHHHhC-CCeEEEECCCCccchHHHHHHHHhccc
Q 006678 130 NGHLVLGGDGRYFNKEAAQIIIKIAAGN-GVGKIMVGRDGIMSTPAVSAVIRKQKA 184 (635)
Q Consensus 130 ~~~VvVG~D~R~sS~~la~a~a~gL~s~-Gv~V~~~~~~G~~pTP~v~fav~~~~a 184 (635)
...|+||||+|.+++.+.+++++||.+. |.+|.++ |.++||+++|+++..+.
T Consensus 132 ~~~v~vg~d~r~s~~~l~~al~~gl~~~~G~~v~~~---G~~ttP~l~~~v~~~~~ 184 (544)
T 2dka_A 132 PANVVIARDSRESSPALSMATIDGFQSVPNTKYQDF---GLFTTPELHYVTRTLND 184 (544)
T ss_dssp CEEEEEEECSCTTHHHHHHHHHHHHHTSSSEEEEEE---EECCHHHHHHHHHHHHC
T ss_pred CceEEeccCCCCCCHHHHHHHHhhhhhhcCCeEEEe---cccccchheeeeeeccc
Confidence 4689999999999999999999999999 9999999 99999999999887654
No 16
>1o1x_A Ribose-5-phosphate isomerase RPIB; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.90A {Thermotoga maritima} SCOP: c.121.1.1
Probab=75.24 E-value=7.3 Score=35.84 Aligned_cols=33 Identities=15% Similarity=0.155 Sum_probs=29.7
Q ss_pred CeEEEEecCCcCHHHHHHHHHHHHHhCCCeEEEEC
Q 006678 131 GHLVLGGDGRYFNKEAAQIIIKIAAGNGVGKIMVG 165 (635)
Q Consensus 131 ~~VvVG~D~R~sS~~la~a~a~gL~s~Gv~V~~~~ 165 (635)
-+|+||.|- .+-.+++.+.+-|.+.|.+|+|++
T Consensus 13 ~~i~igsDh--aG~~lK~~i~~~L~~~G~eV~D~G 45 (155)
T 1o1x_A 13 VKIAIASDH--AAFELKEKVKNYLLGKGIEVEDHG 45 (155)
T ss_dssp CEEEEEECS--TTHHHHHHHHHHHHHTTCEEEECC
T ss_pred eeEEEeeCc--hHHHHHHHHHHHHHHCCCEEEEeC
Confidence 479999995 678999999999999999999993
No 17
>2vvp_A Ribose-5-phosphate isomerase B; RPIB, RV2465C, RARE sugar, carbohydrate metabolism, pentose phosphate pathway; HET: R52 5RP; 1.65A {Mycobacterium tuberculosis} SCOP: c.121.1.1 PDB: 2vvo_A* 2vvq_A* 2bes_A* 2bet_A* 1usl_A
Probab=71.06 E-value=8.6 Score=35.65 Aligned_cols=32 Identities=31% Similarity=0.303 Sum_probs=28.9
Q ss_pred eEEEEecCCcCHHHHHHHHHHHHHhCCCeEEEEC
Q 006678 132 HLVLGGDGRYFNKEAAQIIIKIAAGNGVGKIMVG 165 (635)
Q Consensus 132 ~VvVG~D~R~sS~~la~a~a~gL~s~Gv~V~~~~ 165 (635)
+|+||.| +.+-.+++.+.+-|.+.|++|+|++
T Consensus 5 kIaigsD--haG~~lK~~i~~~L~~~G~eV~D~G 36 (162)
T 2vvp_A 5 RVYLGAD--HAGYELKQRIIEHLKQTGHEPIDCG 36 (162)
T ss_dssp EEEEEEC--HHHHHHHHHHHHHHHHTTCEEEECS
T ss_pred EEEEEeC--chhHHHHHHHHHHHHHCCCEEEEeC
Confidence 6899998 4678999999999999999999993
No 18
>2vvr_A Ribose-5-phosphate isomerase B; RPIB, carbohydrate metabolism, pentose phosphate pathway; 2.10A {Escherichia coli} PDB: 1nn4_A
Probab=70.94 E-value=7.4 Score=35.62 Aligned_cols=31 Identities=19% Similarity=0.158 Sum_probs=27.9
Q ss_pred eEEEEecCCcCHHHHHHHHHHHHHhCCCeEEEE
Q 006678 132 HLVLGGDGRYFNKEAAQIIIKIAAGNGVGKIMV 164 (635)
Q Consensus 132 ~VvVG~D~R~sS~~la~a~a~gL~s~Gv~V~~~ 164 (635)
+|+||.|. .+-.+++.+.+-|.+.|++|+|+
T Consensus 3 kIaigsDh--aG~~lK~~i~~~L~~~G~eV~D~ 33 (149)
T 2vvr_A 3 KIAFGCDH--VGFILKHEIVAHLVERGVEVIDK 33 (149)
T ss_dssp EEEEEECT--TGGGGHHHHHHHHHHTTCEEEEC
T ss_pred EEEEEeCc--hhHHHHHHHHHHHHHCCCEEEEe
Confidence 58999995 56789999999999999999999
No 19
>3he8_A Ribose-5-phosphate isomerase; CTRPI B, isomerization; 1.90A {Clostridium thermocellum} PDB: 3hee_A*
Probab=64.33 E-value=20 Score=32.73 Aligned_cols=32 Identities=19% Similarity=0.183 Sum_probs=28.6
Q ss_pred eEEEEecCCcCHHHHHHHHHHHHHhCCCeEEEEC
Q 006678 132 HLVLGGDGRYFNKEAAQIIIKIAAGNGVGKIMVG 165 (635)
Q Consensus 132 ~VvVG~D~R~sS~~la~a~a~gL~s~Gv~V~~~~ 165 (635)
+|+||.|- .+-.+++.+.+-|.+.|.+|+|++
T Consensus 2 kI~igsDh--aG~~lK~~i~~~L~~~G~eV~D~G 33 (149)
T 3he8_A 2 KIGIGSDH--GGYNLKREIADFLKKRGYEVIDFG 33 (149)
T ss_dssp EEEEEECG--GGHHHHHHHHHHHHHTTCEEEECC
T ss_pred EEEEEECc--hhHHHHHHHHHHHHHCCCEEEEcC
Confidence 58899995 578999999999999999999993
No 20
>3s5p_A Ribose 5-phosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.30A {Giardia lamblia}
Probab=61.35 E-value=17 Score=33.71 Aligned_cols=32 Identities=9% Similarity=0.143 Sum_probs=29.2
Q ss_pred CeEEEEecCCcCHHHHHHHHHHHHHhCCCeEEEE
Q 006678 131 GHLVLGGDGRYFNKEAAQIIIKIAAGNGVGKIMV 164 (635)
Q Consensus 131 ~~VvVG~D~R~sS~~la~a~a~gL~s~Gv~V~~~ 164 (635)
-+|+||.|- .+-.+++.+.+-|.+.|.+|+|+
T Consensus 22 MkIaIgsDh--aG~~lK~~i~~~L~~~G~eV~D~ 53 (166)
T 3s5p_A 22 MKVAFASDH--GGRDLRMFLQQRASAHGYEVMDL 53 (166)
T ss_dssp CEEEEEECG--GGHHHHHHHHHHHHHTTCEEEEE
T ss_pred eEEEEEECc--hHHHHHHHHHHHHHHCCCEEEEc
Confidence 379999995 57899999999999999999999
No 21
>3ph3_A Ribose-5-phosphate isomerase; alpha-beta-alpha sandwich fold; HET: RB5; 2.07A {Clostridium thermocellum} SCOP: c.121.1.1 PDB: 3ph4_A*
Probab=60.02 E-value=26 Score=32.66 Aligned_cols=33 Identities=18% Similarity=0.142 Sum_probs=29.2
Q ss_pred CeEEEEecCCcCHHHHHHHHHHHHHhCCCeEEEEC
Q 006678 131 GHLVLGGDGRYFNKEAAQIIIKIAAGNGVGKIMVG 165 (635)
Q Consensus 131 ~~VvVG~D~R~sS~~la~a~a~gL~s~Gv~V~~~~ 165 (635)
-+|+||.|- .+-.+++.+.+-|.+.|.+|+|++
T Consensus 21 MkIaIgsDh--aG~~lK~~i~~~L~~~G~eV~D~G 53 (169)
T 3ph3_A 21 MKIGIGSDH--GGYNLKREIADFLKKRGYEVIDFG 53 (169)
T ss_dssp CEEEEEECG--GGHHHHHHHHHHHHHTTCEEEECC
T ss_pred CEEEEEeCc--hHHHHHHHHHHHHHHCCCEEEEcC
Confidence 469999996 567899999999999999999993
No 22
>2ppw_A Conserved domain protein; the putative RPIB, PSI-2, protein initiative, MCSG, structural genomics, midwest center for S genomics; HET: MSE; 2.01A {Streptococcus pneumoniae}
Probab=44.72 E-value=28 Score=33.72 Aligned_cols=34 Identities=6% Similarity=-0.047 Sum_probs=28.0
Q ss_pred CeEEEEecCCcCH--HHHHHHHHHHHHhCCCeEEEE
Q 006678 131 GHLVLGGDGRYFN--KEAAQIIIKIAAGNGVGKIMV 164 (635)
Q Consensus 131 ~~VvVG~D~R~sS--~~la~a~a~gL~s~Gv~V~~~ 164 (635)
-+|.||.|.-..- ..+++.+.+-|.+.|++|+|+
T Consensus 4 MkIaIgsDha~~lKn~ilk~~i~~~L~~~G~eV~D~ 39 (216)
T 2ppw_A 4 MKIALINENSQASKNHIIYDSLKEATDKKGYQLFNY 39 (216)
T ss_dssp CEEEECCCTTTGGGHHHHHHHHHHHHHHHTCEEEEC
T ss_pred cEEEEEcCChHhhhhhhHHHHHHHHHHHCCCEEEEe
Confidence 4699999988322 236789999999999999999
No 23
>3ph3_A Ribose-5-phosphate isomerase; alpha-beta-alpha sandwich fold; HET: RB5; 2.07A {Clostridium thermocellum} SCOP: c.121.1.1 PDB: 3ph4_A*
Probab=39.03 E-value=59 Score=30.19 Aligned_cols=66 Identities=15% Similarity=0.174 Sum_probs=39.8
Q ss_pred CCcEEEEecCCCchh--hchhHHHHHHcCCceeEeeccccCCCCCCCCCCCC-c-hhHHHHHHHHHhccCCcEEEEecCC
Q 006678 285 SDFRFVFDAMHAVTG--AYAKPIFVEKLGAKPDSILNGVPLEDFGHGHPDPN-L-TYARDLVAIMYGENGPDFGAASDGD 360 (635)
Q Consensus 285 ~~~kVvvD~~~Gaa~--~~~~~lfl~~LG~~~~~~ln~~pd~~Fp~~~P~P~-~-~~l~~L~~~va~~~~adlGia~DgD 360 (635)
..+||++-+-|+-.. ..+.+. |++.|.+++- |+....++. - .....+++.| .+..+|+||.+.|-
T Consensus 19 ~~MkIaIgsDhaG~~lK~~i~~~-L~~~G~eV~D---------~G~~~~~~~dYpd~a~~va~~V-~~g~~d~GIliCGT 87 (169)
T 3ph3_A 19 SHMKIGIGSDHGGYNLKREIADF-LKKRGYEVID---------FGTHGNESVDYPDFGLKVAEAV-KSGECDRGIVICGT 87 (169)
T ss_dssp --CEEEEEECGGGHHHHHHHHHH-HHHTTCEEEE---------CCCCSSSCCCHHHHHHHHHHHH-HTTSSSEEEEEESS
T ss_pred CCCEEEEEeCchHHHHHHHHHHH-HHHCCCEEEE---------cCCCCCCCCCHHHHHHHHHHHH-HcCCCCEEEEEcCC
Confidence 468999998886432 345666 4888998642 221112221 1 2556778888 77777888777755
Q ss_pred C
Q 006678 361 G 361 (635)
Q Consensus 361 g 361 (635)
|
T Consensus 88 G 88 (169)
T 3ph3_A 88 G 88 (169)
T ss_dssp S
T ss_pred c
Confidence 4
No 24
>3k7p_A Ribose 5-phosphate isomerase; pentose phosphate pathway, type B ribose 5-phosphate isomera (RPIB), R5P; 1.40A {Trypanosoma cruzi} SCOP: c.121.1.0 PDB: 3k7s_A* 3k7o_A* 3k8c_A* 3m1p_A
Probab=38.94 E-value=45 Score=31.26 Aligned_cols=32 Identities=13% Similarity=0.148 Sum_probs=28.4
Q ss_pred eEEEEecCCcCHHHHHHHHHHHHHh--CCCeEEEEC
Q 006678 132 HLVLGGDGRYFNKEAAQIIIKIAAG--NGVGKIMVG 165 (635)
Q Consensus 132 ~VvVG~D~R~sS~~la~a~a~gL~s--~Gv~V~~~~ 165 (635)
+|+||.|- .+-.+++.+.+-|.+ .|++|+|++
T Consensus 24 kIaIgsDh--aG~~lK~~i~~~L~~~~~G~eV~D~G 57 (179)
T 3k7p_A 24 RVAIGTDH--PAFAIHENLILYVKEAGDEFVPVYCG 57 (179)
T ss_dssp EEEEEECT--GGGGGHHHHHHHHHHTCTTEEEEECS
T ss_pred EEEEEECc--hHHHHHHHHHHHHHhcCCCCeEEEcC
Confidence 69999996 456899999999999 999999993
No 25
>2vvr_A Ribose-5-phosphate isomerase B; RPIB, carbohydrate metabolism, pentose phosphate pathway; 2.10A {Escherichia coli} PDB: 1nn4_A
Probab=38.09 E-value=57 Score=29.69 Aligned_cols=64 Identities=16% Similarity=0.120 Sum_probs=38.0
Q ss_pred cEEEEecCCCc--hhhchhHHHHHHcCCceeEeeccccCCCCCCCCCCCC-c-hhHHHHHHHHHhccCCcEEEEecCCC
Q 006678 287 FRFVFDAMHAV--TGAYAKPIFVEKLGAKPDSILNGVPLEDFGHGHPDPN-L-TYARDLVAIMYGENGPDFGAASDGDG 361 (635)
Q Consensus 287 ~kVvvD~~~Ga--a~~~~~~lfl~~LG~~~~~~ln~~pd~~Fp~~~P~P~-~-~~l~~L~~~va~~~~adlGia~DgDg 361 (635)
+||++-+-|+. --..+.+. |++.|.+++- |+....++. - .....+++.| .+..+|+||.+.|.|
T Consensus 2 MkIaigsDhaG~~lK~~i~~~-L~~~G~eV~D---------~G~~~~~~~dYpd~a~~va~~V-~~g~~d~GIliCGTG 69 (149)
T 2vvr_A 2 KKIAFGCDHVGFILKHEIVAH-LVERGVEVID---------KGTWSSERTDYPHYASQVALAV-AGGEVDGGILICGTG 69 (149)
T ss_dssp CEEEEEECTTGGGGHHHHHHH-HHHTTCEEEE---------CCCCSSSCCCHHHHHHHHHHHH-HTTSSSEEEEEESSS
T ss_pred cEEEEEeCchhHHHHHHHHHH-HHHCCCEEEE---------eCCCCCCCCChHHHHHHHHHHH-HcCCCceEEEEeCCc
Confidence 46777777762 23456667 4889998642 211111111 1 2456777778 677778887777554
No 26
>4em8_A Ribose 5-phosphate isomerase B; ssgcid, seattle structural genomics center for infectious DI niaid; 1.95A {Anaplasma phagocytophilum}
Probab=36.69 E-value=42 Score=30.51 Aligned_cols=31 Identities=13% Similarity=0.061 Sum_probs=28.7
Q ss_pred eEEEEecCCcCHHHHHHHHHHHHHhCCCeEEEE
Q 006678 132 HLVLGGDGRYFNKEAAQIIIKIAAGNGVGKIMV 164 (635)
Q Consensus 132 ~VvVG~D~R~sS~~la~a~a~gL~s~Gv~V~~~ 164 (635)
+|+||.|- .+-.+++.+.+-|.+.|++|+|+
T Consensus 9 kI~igsDh--aG~~lK~~i~~~L~~~G~eV~D~ 39 (148)
T 4em8_A 9 RVFLSSDH--AGVELRLFLSAYLRDLGCEVFDC 39 (148)
T ss_dssp EEEEEECG--GGHHHHHHHHHHHHHTTCEEEEC
T ss_pred EEEEEECc--hhHHHHHHHHHHHHHCCCEEEEe
Confidence 69999995 57899999999999999999999
No 27
>3he8_A Ribose-5-phosphate isomerase; CTRPI B, isomerization; 1.90A {Clostridium thermocellum} PDB: 3hee_A*
Probab=36.69 E-value=70 Score=29.08 Aligned_cols=63 Identities=14% Similarity=0.152 Sum_probs=36.9
Q ss_pred EEEEecCCCch--hhchhHHHHHHcCCceeEeeccccCCCCCCCCCCCC-c-hhHHHHHHHHHhccCCcEEEEecCCC
Q 006678 288 RFVFDAMHAVT--GAYAKPIFVEKLGAKPDSILNGVPLEDFGHGHPDPN-L-TYARDLVAIMYGENGPDFGAASDGDG 361 (635)
Q Consensus 288 kVvvD~~~Gaa--~~~~~~lfl~~LG~~~~~~ln~~pd~~Fp~~~P~P~-~-~~l~~L~~~va~~~~adlGia~DgDg 361 (635)
||++-+-|+-- -..+.+. |++.|.+++- |+....++. - .....+++.| .+..+|+||.+.|.|
T Consensus 2 kI~igsDhaG~~lK~~i~~~-L~~~G~eV~D---------~G~~~~~~~dYpd~a~~va~~V-~~g~~d~GIliCGTG 68 (149)
T 3he8_A 2 KIGIGSDHGGYNLKREIADF-LKKRGYEVID---------FGTHGNESVDYPDFGLKVAEAV-KSGECDRGIVICGTG 68 (149)
T ss_dssp EEEEEECGGGHHHHHHHHHH-HHHTTCEEEE---------CCCCSSSCCCHHHHHHHHHHHH-HTTSSSEEEEEESSS
T ss_pred EEEEEECchhHHHHHHHHHH-HHHCCCEEEE---------cCCCCCCCCCHHHHHHHHHHHH-HcCCCCEEEEEcCCc
Confidence 57777777532 2245566 4888988642 222222222 1 2556778888 777778887776554
No 28
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=34.97 E-value=1.9e+02 Score=28.16 Aligned_cols=61 Identities=21% Similarity=0.229 Sum_probs=42.4
Q ss_pred CCeEEEEe---cCCcCHHHHHHHHHHHHHhCCCeEEEECCCCccchHHHHHHHHhccccceeEEeccCCC
Q 006678 130 NGHLVLGG---DGRYFNKEAAQIIIKIAAGNGVGKIMVGRDGIMSTPAVSAVIRKQKANGGFIMSASHNP 196 (635)
Q Consensus 130 ~~~VvVG~---D~R~sS~~la~a~a~gL~s~Gv~V~~~~~~G~~pTP~v~fav~~~~a~gGI~ITASHNP 196 (635)
..+|+++. |.+.-+. ..++..|..+|++|++++ -.+|...+.-++++.+++ .|.++++..+
T Consensus 123 ~~~vlla~~~gd~HdiG~---~iva~~L~~~G~~Vi~LG--~~vp~e~l~~~~~~~~~d-~V~lS~l~~~ 186 (258)
T 2i2x_B 123 KGTVVCHVAEGDVHDIGK---NIVTALLRANGYNVVDLG--RDVPAEEVLAAVQKEKPI-MLTGTALMTT 186 (258)
T ss_dssp SCEEEEEECTTCCCCHHH---HHHHHHHHHTTCEEEEEE--EECCSHHHHHHHHHHCCS-EEEEECCCTT
T ss_pred CCeEEEEeCCCCccHHHH---HHHHHHHHHCCCEEEECC--CCCCHHHHHHHHHHcCCC-EEEEEeeccC
Confidence 45677764 6665554 455667889999999993 257777787788877766 4666665443
No 29
>3s5p_A Ribose 5-phosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.30A {Giardia lamblia}
Probab=34.60 E-value=77 Score=29.34 Aligned_cols=66 Identities=14% Similarity=0.151 Sum_probs=39.4
Q ss_pred CCcEEEEecCCCch--hhchhHHHHHHcCCceeEeecccc--CCCCCCCCCCCCchhHHHHHHHHHhccCCcEEEEecCC
Q 006678 285 SDFRFVFDAMHAVT--GAYAKPIFVEKLGAKPDSILNGVP--LEDFGHGHPDPNLTYARDLVAIMYGENGPDFGAASDGD 360 (635)
Q Consensus 285 ~~~kVvvD~~~Gaa--~~~~~~lfl~~LG~~~~~~ln~~p--d~~Fp~~~P~P~~~~l~~L~~~va~~~~adlGia~DgD 360 (635)
..+||++-+-|+.- -..+.+. |++.|.+++- +-... .-+| ......+++.| .+..+|+||.+.|.
T Consensus 20 ~~MkIaIgsDhaG~~lK~~i~~~-L~~~G~eV~D-~G~~~~~~~dY--------Pd~a~~va~~V-~~g~~d~GIliCGT 88 (166)
T 3s5p_A 20 GSMKVAFASDHGGRDLRMFLQQR-ASAHGYEVMD-LGTESDASVDY--------PDFAKIGCEAV-TSGRADCCILVCGT 88 (166)
T ss_dssp TTCEEEEEECGGGHHHHHHHHHH-HHHTTCEEEE-EEC----------------CHHHHHHHHHH-HTTSCSEEEEEESS
T ss_pred CceEEEEEECchHHHHHHHHHHH-HHHCCCEEEE-cCCCCCCCCCH--------HHHHHHHHHHH-HcCCCcEEEEEcCC
Confidence 35789999888642 2245666 4888998653 21110 0111 13556777888 77777888777765
Q ss_pred C
Q 006678 361 G 361 (635)
Q Consensus 361 g 361 (635)
|
T Consensus 89 G 89 (166)
T 3s5p_A 89 G 89 (166)
T ss_dssp S
T ss_pred c
Confidence 4
No 30
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=34.18 E-value=1e+02 Score=28.92 Aligned_cols=59 Identities=20% Similarity=0.225 Sum_probs=41.6
Q ss_pred CCeEEEEe---cCCcCHHHHHHHHHHHHHhCCCeEEEECCCCccchHHHHHHHHhccccceeEEeccC
Q 006678 130 NGHLVLGG---DGRYFNKEAAQIIIKIAAGNGVGKIMVGRDGIMSTPAVSAVIRKQKANGGFIMSASH 194 (635)
Q Consensus 130 ~~~VvVG~---D~R~sS~~la~a~a~gL~s~Gv~V~~~~~~G~~pTP~v~fav~~~~a~gGI~ITASH 194 (635)
..+|+++. |.+.-+. ..++..|..+|++|++++ -.+|...+.-++++.+++ .|.+|++.
T Consensus 88 ~~~vll~~~~gd~H~iG~---~~va~~l~~~G~~v~~LG--~~vp~~~l~~~~~~~~~d-~v~lS~~~ 149 (210)
T 1y80_A 88 VGKIVLGTVKGDLHDIGK---NLVAMMLESGGFTVYNLG--VDIEPGKFVEAVKKYQPD-IVGMSALL 149 (210)
T ss_dssp CCEEEEEEBTTCCCCHHH---HHHHHHHHHTTCEEEECC--SSBCHHHHHHHHHHHCCS-EEEEECCS
T ss_pred CCEEEEEeCCCcccHHHH---HHHHHHHHHCCCEEEECC--CCCCHHHHHHHHHHcCCC-EEEEeccc
Confidence 44787775 6665554 456777889999999994 357777887888877765 46666653
No 31
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=33.92 E-value=1.8e+02 Score=27.73 Aligned_cols=55 Identities=15% Similarity=0.131 Sum_probs=39.3
Q ss_pred CCeEEEEe---cCCcCHHHHHHHHHHHHHhCCCeEEEECCCCccchHHHHHHHHhccccceeEE
Q 006678 130 NGHLVLGG---DGRYFNKEAAQIIIKIAAGNGVGKIMVGRDGIMSTPAVSAVIRKQKANGGFIM 190 (635)
Q Consensus 130 ~~~VvVG~---D~R~sS~~la~a~a~gL~s~Gv~V~~~~~~G~~pTP~v~fav~~~~a~gGI~I 190 (635)
..+|+++. |.+.-+..+ ++..|..+|++|++++ -.+|...+--++++.+++ -|.+
T Consensus 92 ~~~vll~~v~gd~HdiG~~i---v~~~l~~~G~~Vi~LG--~~vp~e~iv~~~~~~~~d-~v~l 149 (215)
T 3ezx_A 92 AGLAITFVAEGDIHDIGHRL---VTTMLGANGFQIVDLG--VDVLNENVVEEAAKHKGE-KVLL 149 (215)
T ss_dssp CCEEEEEECTTCCCCHHHHH---HHHHHHHTSCEEEECC--SSCCHHHHHHHHHHTTTS-CEEE
T ss_pred CCeEEEEeCCCChhHHHHHH---HHHHHHHCCCeEEEcC--CCCCHHHHHHHHHHcCCC-EEEE
Confidence 45788875 888776665 5567889999999993 246777776777776655 3555
No 32
>3sgw_A Ribose 5-phosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, valley fever; 1.70A {Coccidioides immitis} PDB: 3sdw_A 3qd5_A*
Probab=33.58 E-value=82 Score=29.64 Aligned_cols=32 Identities=13% Similarity=-0.011 Sum_probs=28.6
Q ss_pred CeEEEEecCCcCHHHHHHHHHHHHHhCC--CeEEEE
Q 006678 131 GHLVLGGDGRYFNKEAAQIIIKIAAGNG--VGKIMV 164 (635)
Q Consensus 131 ~~VvVG~D~R~sS~~la~a~a~gL~s~G--v~V~~~ 164 (635)
-+|+||.|- .+-.+++.+.+-|.+.| ++|+|+
T Consensus 30 MkIaIgsDH--aG~~LK~~i~~~L~~~G~g~eV~D~ 63 (184)
T 3sgw_A 30 LRLAIACDD--AGVSYKEALKAHLSDNPLVSSITDV 63 (184)
T ss_dssp EEEEEEECG--GGHHHHHHHHHHHTTCTTEEEEEEC
T ss_pred cEEEEEECc--hhHHHHHHHHHHHHhCCCCcEEEEc
Confidence 469999995 57899999999999999 799999
No 33
>3fni_A Putative diflavin flavoprotein A 3; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.30A {Nostoc SP} PDB: 2klb_A
Probab=33.06 E-value=1.3e+02 Score=26.85 Aligned_cols=34 Identities=26% Similarity=0.258 Sum_probs=28.6
Q ss_pred CeEEEEecCCc-CHHHHHHHHHHHHHhCCCeEEEE
Q 006678 131 GHLVLGGDGRY-FNKEAAQIIIKIAAGNGVGKIMV 164 (635)
Q Consensus 131 ~~VvVG~D~R~-sS~~la~a~a~gL~s~Gv~V~~~ 164 (635)
.+|+|-+.+.. +.+.++++++++|.+.|++|..+
T Consensus 5 ~kv~IvY~S~~GnT~~iA~~ia~~l~~~g~~v~~~ 39 (159)
T 3fni_A 5 TSIGVFYVSEYGYSDRLAQAIINGITKTGVGVDVV 39 (159)
T ss_dssp CEEEEEECTTSTTHHHHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEEEECCChHHHHHHHHHHHHHHHCCCeEEEE
Confidence 46888888874 68999999999999999887655
No 34
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=32.52 E-value=61 Score=28.57 Aligned_cols=58 Identities=17% Similarity=0.244 Sum_probs=38.5
Q ss_pred CeEEE---EecCCcCHHHHHHHHHHHHHhCCCeEEEECCCCccchHHHHHHHHhccccceeEEeccC
Q 006678 131 GHLVL---GGDGRYFNKEAAQIIIKIAAGNGVGKIMVGRDGIMSTPAVSAVIRKQKANGGFIMSASH 194 (635)
Q Consensus 131 ~~VvV---G~D~R~sS~~la~a~a~gL~s~Gv~V~~~~~~G~~pTP~v~fav~~~~a~gGI~ITASH 194 (635)
.+|++ +.|.+.-+.. .++..|...|++|++++ ..+|...+--++++.+++ -|.++++-
T Consensus 4 ~~vvla~~~~d~HdiG~~---~v~~~l~~~G~~Vi~lG--~~~p~e~~v~~a~~~~~d-~v~lS~~~ 64 (137)
T 1ccw_A 4 KTIVLGVIGSDCHAVGNK---ILDHAFTNAGFNVVNIG--VLSPQELFIKAAIETKAD-AILVSSLY 64 (137)
T ss_dssp CEEEEEEETTCCCCHHHH---HHHHHHHHTTCEEEEEE--EEECHHHHHHHHHHHTCS-EEEEEECS
T ss_pred CEEEEEeCCCchhHHHHH---HHHHHHHHCCCEEEECC--CCCCHHHHHHHHHhcCCC-EEEEEecC
Confidence 35555 4576655544 55678889999999993 257777777777777765 35555443
No 35
>2ppw_A Conserved domain protein; the putative RPIB, PSI-2, protein initiative, MCSG, structural genomics, midwest center for S genomics; HET: MSE; 2.01A {Streptococcus pneumoniae}
Probab=31.40 E-value=75 Score=30.68 Aligned_cols=65 Identities=12% Similarity=0.157 Sum_probs=39.8
Q ss_pred CcEEEEecCCCchh------hchhHHHHHHcCCceeEeeccccCCCCCCCCC---CC-Cc-hhHHHHHHHHHhccCCcEE
Q 006678 286 DFRFVFDAMHAVTG------AYAKPIFVEKLGAKPDSILNGVPLEDFGHGHP---DP-NL-TYARDLVAIMYGENGPDFG 354 (635)
Q Consensus 286 ~~kVvvD~~~Gaa~------~~~~~lfl~~LG~~~~~~ln~~pd~~Fp~~~P---~P-~~-~~l~~L~~~va~~~~adlG 354 (635)
++||++-+-|+... ..+.+. |++.|.+++- |+...+ ++ .- .....+++.| .+..+|+|
T Consensus 3 ~MkIaIgsDha~~lKn~ilk~~i~~~-L~~~G~eV~D---------~G~~s~~d~~s~DYPd~a~~vA~~V-~~g~~d~G 71 (216)
T 2ppw_A 3 AMKIALINENSQASKNHIIYDSLKEA-TDKKGYQLFN---------YGMRGEEGESQLTYVQNGLMAAILL-NTKAVDFV 71 (216)
T ss_dssp CCEEEECCCTTTGGGHHHHHHHHHHH-HHHHTCEEEE---------CSCCSCTTCCCCCHHHHHHHHHHHH-HTTSCSEE
T ss_pred CcEEEEEcCChHhhhhhhHHHHHHHH-HHHCCCEEEE---------eCCCCCCCCCCCChHHHHHHHHHHH-HcCCCCeE
Confidence 48899988888432 355666 4888998642 221111 11 11 2456777778 77777888
Q ss_pred EEecCCC
Q 006678 355 AASDGDG 361 (635)
Q Consensus 355 ia~DgDg 361 (635)
|.+.|.|
T Consensus 72 IliCGTG 78 (216)
T 2ppw_A 72 VTGCGTG 78 (216)
T ss_dssp EEEESSS
T ss_pred EEEcCCc
Confidence 7776554
No 36
>3ono_A Ribose/galactose isomerase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.75A {Vibrio parahaemolyticus}
Probab=29.77 E-value=66 Score=31.06 Aligned_cols=31 Identities=23% Similarity=0.285 Sum_probs=26.5
Q ss_pred eEEEEecCCcCHHHHHH-----HHHHHHHhCCCeEEEEC
Q 006678 132 HLVLGGDGRYFNKEAAQ-----IIIKIAAGNGVGKIMVG 165 (635)
Q Consensus 132 ~VvVG~D~R~sS~~la~-----a~a~gL~s~Gv~V~~~~ 165 (635)
+|+||.|.- ..+++ .+.+-|.+.|++|+|++
T Consensus 5 kIaigsDha---~~lK~~~i~~~l~~~L~~~G~eV~D~G 40 (214)
T 3ono_A 5 KIALMMENS---QAAKNAMVAGELNSVAGGLGHDVFNVG 40 (214)
T ss_dssp EEEECCCGG---GGGGHHHHHHHHHHHHHHTTCEEEECS
T ss_pred EEEEECCCc---HHHHChhHHHHHHHHHHHCCCEEEEcC
Confidence 699999987 45555 99999999999999993
No 37
>4dik_A Flavoprotein; TM0755, electron transport, DI-iron protein; 1.75A {Thermotoga maritima} PDB: 4dil_A 1vme_A*
Probab=28.91 E-value=1.8e+02 Score=30.59 Aligned_cols=61 Identities=16% Similarity=0.216 Sum_probs=39.6
Q ss_pred CCCeEEEEecCCcCH-HHHHHHHHHHHHhCCCeEEEECCCCccchHHHHHHHHhccccceeEE
Q 006678 129 KNGHLVLGGDGRYFN-KEAAQIIIKIAAGNGVGKIMVGRDGIMSTPAVSAVIRKQKANGGFIM 190 (635)
Q Consensus 129 ~~~~VvVG~D~R~sS-~~la~a~a~gL~s~Gv~V~~~~~~G~~pTP~v~fav~~~~a~gGI~I 190 (635)
...+|+|-+++.+.+ +.+|++++++|.+.|++++.+.- --+..+-++..+....-..||.+
T Consensus 264 ~~~~v~I~Y~S~yGnTe~mA~~ia~gl~~~Gv~~~~~~~-~d~~~~~~s~i~~~i~~~~~ivl 325 (410)
T 4dik_A 264 KKGKVTVIYDSMYGFVENVMKKAIDSLKEKGFTPVVYKF-SDEERPAISEILKDIPDSEALIF 325 (410)
T ss_dssp CTTEEEEEEECSSSHHHHHHHHHHHHHHHTTCEEEEEEE-CSSCCCCHHHHHHHSTTCSEEEE
T ss_pred cccceeeEEecccChHHHHHHHHHHHHHhcCCceEEEEe-ccCCCCCHHHHHHHHHhCCeEEE
Confidence 345799999999775 56899999999999999764310 12333334555544322335555
No 38
>2jpi_A Hypothetical protein; alpha-helix/beta-sheet, structural genomics, ontario centre for structural proteomics, OCSP; NMR {Pseudomonas aeruginosa}
Probab=27.07 E-value=1.7e+02 Score=25.39 Aligned_cols=80 Identities=10% Similarity=0.135 Sum_probs=45.9
Q ss_pred hHHHHHHHHHHHhhccccccCCcCCCceeeecccCccCCCCCCCCCCcCeEEEEEcCCeEEEEEeCCCCCCCCEEEEEEE
Q 006678 513 SEGANKMIGYLRDLVSKSKAGDKYGNYVLQFADDFAYTDPVDGSVASKQGVRFVFTDGSRIIFRLSGTGSAGATVRIYIE 592 (635)
Q Consensus 513 ~~~~~~vm~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~d~v~~~i~~~dGiki~f~dGswvliRpSgTEP~~~~iriY~E 592 (635)
.+...+.+++|.+.+.. ...++. | . +..++.|..| -+.+.+++. .+.+.+|
T Consensus 32 T~~asryl~qLc~H~~h--------K~~ve~-------d-------~-~~g~i~fp~G-~~~l~a~~~-----~L~i~v~ 82 (118)
T 2jpi_A 32 TESAARYVNRLCKHWGH--------KFEVEL-------T-------P-ERGFIDFGDS-NCELLAHPD-----HVLMILN 82 (118)
T ss_dssp CSSHHHHHHHHHHHTTT--------SSEEEE-------C-------S-SEEEEECSSS-CEEEEEETT-----EEEEEEE
T ss_pred CCCHHHHHHHHHHHHHh--------hCCceE-------c-------C-CceEEEeCCe-EEEEEecCC-----eEEEEEE
Confidence 34567889999888642 112221 1 0 2448888887 455555544 5888888
Q ss_pred eeCcChhhhHHHHHHHHHHHHHHHHhhcCcccccCCCCCcc
Q 006678 593 QFEPDVSKHEMDAQSALKPLIDLALSVSKLRDFTGREKPTV 633 (635)
Q Consensus 593 a~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~ 633 (635)
+.+.+... . +.+++.+.. .+|.+|+.+++
T Consensus 83 A~d~e~L~---~-------lk~VVa~HL--~rFa~re~l~i 111 (118)
T 2jpi_A 83 SPDEDSLA---H-------MQNVVADHL--QRMANSESLEI 111 (118)
T ss_dssp ESSHHHHH---H-------HHHHHHHHH--HHTSTTSSCCC
T ss_pred eCCHHHHH---H-------HHHHHHHHH--HHhccCCCcee
Confidence 87644222 2 223333332 67888887754
No 39
>3k7p_A Ribose 5-phosphate isomerase; pentose phosphate pathway, type B ribose 5-phosphate isomera (RPIB), R5P; 1.40A {Trypanosoma cruzi} SCOP: c.121.1.0 PDB: 3k7s_A* 3k7o_A* 3k8c_A* 3m1p_A
Probab=26.34 E-value=1.3e+02 Score=28.18 Aligned_cols=65 Identities=15% Similarity=0.213 Sum_probs=39.2
Q ss_pred CcEEEEecCCCchh--hchhHHHHHH--cCCceeEeeccccCCCCCCCCCCCC--chhHHHHHHHHHhccCCcEEEEecC
Q 006678 286 DFRFVFDAMHAVTG--AYAKPIFVEK--LGAKPDSILNGVPLEDFGHGHPDPN--LTYARDLVAIMYGENGPDFGAASDG 359 (635)
Q Consensus 286 ~~kVvvD~~~Gaa~--~~~~~lfl~~--LG~~~~~~ln~~pd~~Fp~~~P~P~--~~~l~~L~~~va~~~~adlGia~Dg 359 (635)
.+||++-+-|+-.. ..+.+. |++ .|.+++- |+....++. ......+++.| .+..+|+||.+.|
T Consensus 22 ~MkIaIgsDhaG~~lK~~i~~~-L~~~~~G~eV~D---------~G~~s~~s~DYPd~a~~vA~~V-~~g~~d~GIliCG 90 (179)
T 3k7p_A 22 TRRVAIGTDHPAFAIHENLILY-VKEAGDEFVPVY---------CGPKTAESVDYPDFASRVAEMV-ARKEVEFGVLAAG 90 (179)
T ss_dssp CEEEEEEECTGGGGGHHHHHHH-HHHTCTTEEEEE---------CSCSSSSCCCHHHHHHHHHHHH-HTTSSSEEEEEES
T ss_pred ceEEEEEECchHHHHHHHHHHH-HHhcCCCCeEEE---------cCCCCCCCCCHHHHHHHHHHHH-HcCCCCEEEEEcc
Confidence 46899988886432 245556 477 8887542 222222222 13556778888 7777788877765
Q ss_pred CC
Q 006678 360 DG 361 (635)
Q Consensus 360 Dg 361 (635)
.|
T Consensus 91 TG 92 (179)
T 3k7p_A 91 SG 92 (179)
T ss_dssp SS
T ss_pred Cc
Confidence 54
No 40
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=26.05 E-value=94 Score=28.19 Aligned_cols=58 Identities=10% Similarity=0.093 Sum_probs=38.6
Q ss_pred CCeEEEE---ecCCcCHHHHHHHHHHHHHhCCCeEEEECCCCccchHHHHHHHHhccccceeEEecc
Q 006678 130 NGHLVLG---GDGRYFNKEAAQIIIKIAAGNGVGKIMVGRDGIMSTPAVSAVIRKQKANGGFIMSAS 193 (635)
Q Consensus 130 ~~~VvVG---~D~R~sS~~la~a~a~gL~s~Gv~V~~~~~~G~~pTP~v~fav~~~~a~gGI~ITAS 193 (635)
..+|+++ .|.+.-+..+ ++..|...|++|++++ ..+|...+.-++++.+++ -|.++++
T Consensus 18 ~~~vlla~~~gd~HdiG~~~---va~~l~~~G~eVi~lG--~~~p~e~lv~aa~~~~~d-iV~lS~~ 78 (161)
T 2yxb_A 18 RYKVLVAKMGLDGHDRGAKV---VARALRDAGFEVVYTG--LRQTPEQVAMAAVQEDVD-VIGVSIL 78 (161)
T ss_dssp SCEEEEEEESSSSCCHHHHH---HHHHHHHTTCEEECCC--SBCCHHHHHHHHHHTTCS-EEEEEES
T ss_pred CCEEEEEeCCCCccHHHHHH---HHHHHHHCCCEEEECC--CCCCHHHHHHHHHhcCCC-EEEEEee
Confidence 3567665 4888766554 4566888999999993 246766777777776655 2444443
No 41
>3c5y_A Ribose/galactose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.81A {Novosphingobium aromaticivorans}
Probab=25.55 E-value=69 Score=31.22 Aligned_cols=32 Identities=13% Similarity=0.078 Sum_probs=26.8
Q ss_pred EEEEecCCcCHHHHHHHHHHHHHhCCCeEEEE
Q 006678 133 LVLGGDGRYFNKEAAQIIIKIAAGNGVGKIMV 164 (635)
Q Consensus 133 VvVG~D~R~sS~~la~a~a~gL~s~Gv~V~~~ 164 (635)
|+++.|.-.....+++.+.+-|.+.|.+|+|+
T Consensus 24 li~~~sqa~kN~~lKe~i~~~L~~~G~eV~D~ 55 (231)
T 3c5y_A 24 LIIENSQAAKNAVVHEALTTVAEPLGHKVFNY 55 (231)
T ss_dssp ECCCGGGGGGHHHHHHHHHHHHGGGTCEEEEC
T ss_pred EEecCCHhhhHHHHHHHHHHHHHHCCCEEEEe
Confidence 44566665566699999999999999999999
No 42
>2ehp_A AQ_1627 protein; putative protein, NPPSFA, national project protein structural and functional analyses; 1.30A {Aquifex aeolicus} PDB: 2eiu_A
Probab=23.25 E-value=3.4e+02 Score=22.95 Aligned_cols=112 Identities=10% Similarity=-0.026 Sum_probs=68.1
Q ss_pred CeeEEcccc-ccHHHHHHHHHHHHHhCCCCCCCCCeEEEEecCCcCHHHHHHHHHHHHHhCCCeEEEECCCCccchHHHH
Q 006678 98 GLRKKVKVF-KQENYLANWIQALFNSLPPEDYKNGHLVLGGDGRYFNKEAAQIIIKIAAGNGVGKIMVGRDGIMSTPAVS 176 (635)
Q Consensus 98 GiRG~~~v~-~tp~~~~~~~~A~g~~l~~~~~~~~~VvVG~D~R~sS~~la~a~a~gL~s~Gv~V~~~~~~G~~pTP~v~ 176 (635)
-+||+-++. +|.+.+-|++.|++..+.-.......+++=-|..+. .-+++-|++..|-+|....
T Consensus 10 kv~G~pG~YPLTaENL~R~GLALCtLl~iek~~eeP~l~i~elNFl----tmalsVGFM~gGG~V~vge----------- 74 (126)
T 2ehp_A 10 KVEGVPGNYPLTAENLFRIGLALCTLWILDKEIEEPTLSIPETNFV----TLALSVGFMNAGGSVNVGK----------- 74 (126)
T ss_dssp CEEECTTSTTSSHHHHHHHHHHHHHHHHHTTCCSSCEEEESSCSHH----HHHHHHHHHHTTCEEEESS-----------
T ss_pred eEeccCCcccccHHHHHHHHHHHHHHHHHHhhhcCCeeeeccccee----eeeeeeeEeccCcceEeec-----------
Confidence 456666554 788888999999988774222223456666777654 4466789999999998762
Q ss_pred HHHHhccccceeEEeccCCCCCCCCCceEEEEcCCCCCCChhHHHHHHhccccchhhhccCCCCCCccccc
Q 006678 177 AVIRKQKANGGFIMSASHNPGGPEYDWGIKFNYSSGQPAPESITDKIYGNTLSISEIKMADIPDVDLSSLG 247 (635)
Q Consensus 177 fav~~~~a~gGI~ITASHNP~~~~~~nGiK~~~~~G~~l~~~~~~~Ie~~~~~ie~~~~~~~~~~~~~~ig 247 (635)
+.++-+.+ . ....-+-.+ .++.+.+.+++|.+++. .| ++|+-.-++||
T Consensus 75 ------g~e~~lfl---k-----~GeidvL~F----~gL~e~D~kKLEsILFg--Ry---niPrKeGeeIG 122 (126)
T 2ehp_A 75 ------GGDIKLFL---Q-----KGEIYVLEF----QPLSETDIKKLESILFG--RA---PIPKKTGEDIG 122 (126)
T ss_dssp ------CCSEEEEE---E-----CSSSEEEEE----ESCCHHHHHHHHHHHTS--SS---CCCCCCGGGSC
T ss_pred ------CCceeEEE---e-----eCcEEEEEE----cCCChhhHHHHHHHhhc--cC---CCCccchhhcc
Confidence 11222222 1 111122222 35788999999998764 23 45554444554
No 43
>1o1x_A Ribose-5-phosphate isomerase RPIB; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.90A {Thermotoga maritima} SCOP: c.121.1.1
Probab=23.23 E-value=1.4e+02 Score=27.27 Aligned_cols=67 Identities=21% Similarity=0.257 Sum_probs=39.8
Q ss_pred CCcEEEEecCCCch--hhchhHHHHHHcCCceeEeeccccCCCCCCCCCCCC-c-hhHHHHHHHHHhccCCcEEEEecCC
Q 006678 285 SDFRFVFDAMHAVT--GAYAKPIFVEKLGAKPDSILNGVPLEDFGHGHPDPN-L-TYARDLVAIMYGENGPDFGAASDGD 360 (635)
Q Consensus 285 ~~~kVvvD~~~Gaa--~~~~~~lfl~~LG~~~~~~ln~~pd~~Fp~~~P~P~-~-~~l~~L~~~va~~~~adlGia~DgD 360 (635)
...||++-+-|+.- -..+.+. |++.|.+++- . +....++. - .....+++.| .+..+|+||.+.|.
T Consensus 11 ~~~~i~igsDhaG~~lK~~i~~~-L~~~G~eV~D---~------G~~~~~~~dYpd~a~~va~~V-~~g~~d~GIliCGT 79 (155)
T 1o1x_A 11 HHVKIAIASDHAAFELKEKVKNY-LLGKGIEVED---H------GTYSEESVDYPDYAKKVVQSI-LSNEADFGILLCGT 79 (155)
T ss_dssp CCCEEEEEECSTTHHHHHHHHHH-HHHTTCEEEE---C------CCCSSSCCCHHHHHHHHHHHH-HTTSCSEEEEEESS
T ss_pred cceeEEEeeCchHHHHHHHHHHH-HHHCCCEEEE---e------CCCCCCCCChHHHHHHHHHHH-HcCCCceEEEEcCC
Confidence 35788888877642 2245566 4888998642 1 11111111 1 2556778888 77778888887765
Q ss_pred CC
Q 006678 361 GD 362 (635)
Q Consensus 361 gD 362 (635)
|-
T Consensus 80 Gi 81 (155)
T 1o1x_A 80 GL 81 (155)
T ss_dssp SH
T ss_pred cH
Confidence 53
No 44
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301}
Probab=22.56 E-value=2.1e+02 Score=25.47 Aligned_cols=32 Identities=22% Similarity=0.206 Sum_probs=25.6
Q ss_pred EEEEecCC-cCHHHHHHHHHHHHHhCCCeEEEE
Q 006678 133 LVLGGDGR-YFNKEAAQIIIKIAAGNGVGKIMV 164 (635)
Q Consensus 133 VvVG~D~R-~sS~~la~a~a~gL~s~Gv~V~~~ 164 (635)
|+|-+.+. -+++.++++++++|.+.|++|..+
T Consensus 3 v~IvY~S~tGnT~~~A~~ia~~l~~~g~~v~~~ 35 (161)
T 3hly_A 3 VLIGYLSDYGYSDRLSQAIGRGLVKTGVAVEMV 35 (161)
T ss_dssp EEEEECTTSTTHHHHHHHHHHHHHHTTCCEEEE
T ss_pred EEEEEECCChHHHHHHHHHHHHHHhCCCeEEEE
Confidence 56666665 468999999999999999887555
No 45
>2vvp_A Ribose-5-phosphate isomerase B; RPIB, RV2465C, RARE sugar, carbohydrate metabolism, pentose phosphate pathway; HET: R52 5RP; 1.65A {Mycobacterium tuberculosis} SCOP: c.121.1.1 PDB: 2vvo_A* 2vvq_A* 2bes_A* 2bet_A* 1usl_A
Probab=20.51 E-value=1.5e+02 Score=27.30 Aligned_cols=64 Identities=17% Similarity=0.194 Sum_probs=38.0
Q ss_pred cEEEEecCCCch--hhchhHHHHHHcCCceeEeeccccCCCCCCCCCCCC--c-hhHHHHHHHHHhccCCcEEEEecCCC
Q 006678 287 FRFVFDAMHAVT--GAYAKPIFVEKLGAKPDSILNGVPLEDFGHGHPDPN--L-TYARDLVAIMYGENGPDFGAASDGDG 361 (635)
Q Consensus 287 ~kVvvD~~~Gaa--~~~~~~lfl~~LG~~~~~~ln~~pd~~Fp~~~P~P~--~-~~l~~L~~~va~~~~adlGia~DgDg 361 (635)
+||++-+-|+.- -..+.+. |++.|.+++- |+....+|. - .....+++.| .+..+|+||.+.|.|
T Consensus 4 MkIaigsDhaG~~lK~~i~~~-L~~~G~eV~D---------~G~~~~~~~~dYpd~a~~va~~V-~~g~~d~GIliCGTG 72 (162)
T 2vvp_A 4 MRVYLGADHAGYELKQRIIEH-LKQTGHEPID---------CGALRYDADDDYPAFCIAAATRT-VADPGSLGIVLGGSG 72 (162)
T ss_dssp CEEEEEECHHHHHHHHHHHHH-HHHTTCEEEE---------CSCCSCCTTCCHHHHHHHHHHHH-HHSTTCEEEEEESSS
T ss_pred CEEEEEeCchhHHHHHHHHHH-HHHCCCEEEE---------eCCCCCCCCCChHHHHHHHHHHH-HcCCCceEEEEeCCc
Confidence 578887777521 2346666 4888998642 221112211 2 2456777888 777788887776554
Done!