BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006680
(635 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O04630|SYTM_ARATH Threonine--tRNA ligase, mitochondrial OS=Arabidopsis thaliana
GN=THRRS PE=2 SV=3
Length = 709
Score = 456 bits (1173), Expect = e-127, Method: Compositional matrix adjust.
Identities = 227/323 (70%), Positives = 250/323 (77%), Gaps = 34/323 (10%)
Query: 312 AFAELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDY 371
++ ELP+RLADFGVLHRNEASGAL+GLTRVRRFQQDDAHIFC Q+K EV+GVLEFIDY
Sbjct: 420 SYRELPMRLADFGVLHRNEASGALSGLTRVRRFQQDDAHIFCTTEQVKGEVQGVLEFIDY 479
Query: 372 AYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKID 431
Y++FGFTYELKLSTRPEKYLGDL TW+KAEA L EA+ FGKP +NEGDGAFYGPKID
Sbjct: 480 VYKVFGFTYELKLSTRPEKYLGDLETWDKAEADLKEAIEAFGKPLVLNEGDGAFYGPKID 539
Query: 432 ISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILL 491
I+VSDA+ RKFQCATLQLDFQLP RFNL Y+AEDEAK RPVMIHRA+LGSVERMFAILL
Sbjct: 540 ITVSDAMNRKFQCATLQLDFQLPIRFNLEYAAEDEAKKSRPVMIHRAVLGSVERMFAILL 599
Query: 492 EHYKGKWPFWLSPRQAIVCPVSEKSQPYALQVRDHIYRAGYYVDVDTTDRKIQKKPNSFV 551
EHYKGKWPFW+SPRQAIVCP+SEKSQ YA +V+ I AG+YVD D TDRKI KK
Sbjct: 600 EHYKGKWPFWISPRQAIVCPISEKSQQYAEKVQKQIKDAGFYVDADLTDRKIDKK----- 654
Query: 552 HARSTYIEVVFSCWEELVAGINIYPIRVSVREAQLAQYNFILVVGEEEAKSGQVSVRVRD 611
VREAQLAQYN+ILVVGE EA +GQVSVRVRD
Sbjct: 655 -----------------------------VREAQLAQYNYILVVGETEAATGQVSVRVRD 685
Query: 612 QGDHSNMSIEDLLKHFKEKLEAF 634
HS SIEDLL+ FK K F
Sbjct: 686 NAAHSVKSIEDLLEEFKAKTAEF 708
Score = 436 bits (1121), Expect = e-121, Method: Compositional matrix adjust.
Identities = 203/276 (73%), Positives = 232/276 (84%), Gaps = 4/276 (1%)
Query: 39 ICAMPS--PNPVKDEEYLIKVIPKRISLFQSLQSEQQARLQSLPHDPIKITLPDGSVKEG 96
C +P+ N KDE YL VIPKRI LF+ +Q+ Q L+SLPHDPIK+TLPDG+VKEG
Sbjct: 28 FCTVPTMAANHPKDEAYLSAVIPKRIKLFEQIQANQLENLKSLPHDPIKVTLPDGNVKEG 87
Query: 97 KRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLFTFDSDEGRDTFWH 156
K+WET+PMDIA ISK LA +ALIS V+ VLWDM RPLE DC L+LF FDSD+GRDT WH
Sbjct: 88 KKWETTPMDIAAQISKGLANSALISAVDDVLWDMNRPLEGDCKLELFKFDSDKGRDTLWH 147
Query: 157 SSAHILGQAIEQQYGCKLCIGPCTTRGEGFYYDAFYGDLGLNPDHFKSI--DSEADKAAK 214
SSAHILGQA+EQ+YGC+LCIGPCTTRGEGFYYD FYG+LGL+ +HF SI +
Sbjct: 148 SSAHILGQALEQEYGCQLCIGPCTTRGEGFYYDGFYGELGLSDNHFPSIEAGAAKAAKEA 207
Query: 215 QPFERIEVTRDQALEMFSDNNFKVEIINDLPADKTITVYRCGPLVDLCRGPHIPNTSFVK 274
QPFERIEVT+DQALEMFS+NNFKVE+IN LPAD TITVYRCGPLVDLCRGPHIPNTSFVK
Sbjct: 208 QPFERIEVTKDQALEMFSENNFKVELINGLPADMTITVYRCGPLVDLCRGPHIPNTSFVK 267
Query: 275 GFGCLKASSAYWRGNKDRESLQRVYGISYPDKKRLK 310
F CL+ASSAYW+G+KDRESLQRVYGISYPD+K+LK
Sbjct: 268 AFKCLRASSAYWKGDKDRESLQRVYGISYPDQKQLK 303
>sp|Q8GZ45|SYTC_ARATH Probable threonine--tRNA ligase, cytoplasmic OS=Arabidopsis
thaliana GN=At1g17960 PE=2 SV=2
Length = 458
Score = 373 bits (957), Expect = e-102, Method: Compositional matrix adjust.
Identities = 191/325 (58%), Positives = 230/325 (70%), Gaps = 39/325 (12%)
Query: 314 AELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAY 373
A+LP+R+A+FGVLHRNE SGAL G+TRVRRF QDDAHIFCR Q+++EV+GVL+FIDY Y
Sbjct: 168 AKLPIRMAEFGVLHRNEDSGALGGMTRVRRFVQDDAHIFCRVDQVEEEVKGVLDFIDYVY 227
Query: 374 RIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDIS 433
RIFGFTYEL LSTRP+ ++GDL TW KAE L +AL++FGKPW I EGDGAFYGPKIDI+
Sbjct: 228 RIFGFTYELTLSTRPKDHIGDLETWAKAENDLEKALDDFGKPWVIKEGDGAFYGPKIDIT 287
Query: 434 VSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEH 493
VSDA RKFQCAT+QLDFQLP F L Y +E + + E PVMIH A+LGS+ERMFAILLEH
Sbjct: 288 VSDARNRKFQCATIQLDFQLPACFKLKYLSE-KNEMEAPVMIHSAVLGSIERMFAILLEH 346
Query: 494 YKGKWPFWLSPRQAIVCPVSEKSQPYALQVRDHIYRAGYYVDVDTTDRKIQKKPNSFVHA 553
YKG WPFWLSPRQAIVC +SE YA QV+ I GYYVD+D +DR ++KK
Sbjct: 347 YKGIWPFWLSPRQAIVCSLSEDCSSYAKQVQKQINEVGYYVDIDESDRSLRKK------- 399
Query: 554 RSTYIEVVFSCWEELVAGINIYPIRVSVREAQLAQYNFILVVGEEEAKSGQVSVRVRD-- 611
V +A+ A YN+ILVVG++E +GQV+VR+R+
Sbjct: 400 ---------------------------VADARDAPYNYILVVGQKEVATGQVTVRLREDP 432
Query: 612 --QGDHSNMSIEDLLKHFKEKLEAF 634
+ D MSIE LL FK K F
Sbjct: 433 EGRKDLPEMSIESLLDEFKFKTVNF 457
Score = 243 bits (619), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 115/169 (68%), Positives = 138/169 (81%), Gaps = 2/169 (1%)
Query: 42 MPSPNPVKDEEYLIKVIPKRISLFQSLQSEQQARLQSLPHDPIKITL-PDGSVKEGKRWE 100
M + + KDE YL VIPKRI LF+ +Q+EQ +LQS PHDPIKITL PDG KEG+RWE
Sbjct: 1 MANNHHPKDEAYLSSVIPKRIRLFEEIQAEQLEQLQSRPHDPIKITLLPDGIEKEGRRWE 60
Query: 101 TSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLFTFDSDEGRDTFWHSSAH 160
TSPMDIA ISK LA +AL+S VN VLWDM RPLE DC L++F FDSD+GR+TFWHSSAH
Sbjct: 61 TSPMDIAVQISKGLAKSALVSSVNHVLWDMNRPLEGDCSLEIFGFDSDQGRNTFWHSSAH 120
Query: 161 ILGQAIEQQYGCKLCIGPCTTRGEGFYYDA-FYGDLGLNPDHFKSIDSE 208
ILGQA+EQ+YGCKLCIGPC R EGFYYD+ +YG+LGLN +HF +I+++
Sbjct: 121 ILGQALEQEYGCKLCIGPCEPRDEGFYYDSLYYGELGLNDNHFPNIEAK 169
>sp|Q54J66|SYTC1_DICDI Probable threonine--tRNA ligase 1, cytoplasmic OS=Dictyostelium
discoideum GN=thrS1 PE=3 SV=1
Length = 710
Score = 353 bits (907), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 173/327 (52%), Positives = 223/327 (68%), Gaps = 35/327 (10%)
Query: 310 KHAFAELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFI 369
+ ++ ELPLR ADFGVLHRNE +GALTGLTRVR+FQQDDAHIFC I+DE+ L F+
Sbjct: 418 QRSYRELPLRFADFGVLHRNELAGALTGLTRVRKFQQDDAHIFCTTEMIEDEINSCLGFM 477
Query: 370 DYAYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPK 429
Y Y IFGF + L+LSTRP+ +LG++A W+ AEA+L +ALN+FGKPW++N DGAFYGPK
Sbjct: 478 QYVYGIFGFEFGLELSTRPDNFLGEIAQWDIAEASLEKALNKFGKPWKLNPKDGAFYGPK 537
Query: 430 IDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAK-TERPVMIHRAILGSVERMFA 488
IDI ++D LKR QCAT+QLDFQLP RF+L Y ++D A+ +RPV+IHRAILGSVERM A
Sbjct: 538 IDIHITDCLKRSHQCATIQLDFQLPIRFDLEYQSDDAAELKKRPVIIHRAILGSVERMMA 597
Query: 489 ILLEHYKGKWPFWLSPRQAIVCPVSEKSQPYALQVRDHIYRAGYYVDVDTTDRKIQKKPN 548
IL+EH GKWP W+SPRQAIV V++ Y +V I AG+Y D+D +D+ I KK
Sbjct: 598 ILIEHTGGKWPLWVSPRQAIVVTVNKTHNEYGQKVCKEISDAGFYCDIDDSDKTISKK-- 655
Query: 549 SFVHARSTYIEVVFSCWEELVAGINIYPIRVSVREAQLAQYNFILVVGEEEAKSGQVSVR 608
VREAQLAQYN+ILVVG+EE V+VR
Sbjct: 656 --------------------------------VREAQLAQYNYILVVGQEEINGNTVNVR 683
Query: 609 VRDQGDHSNMSIEDLLKHFKEKLEAFQ 635
RD ++++ DL+ FK+ ++ F+
Sbjct: 684 TRDNVVRGSLTVNDLISEFKQLVKEFK 710
Score = 289 bits (740), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 157/349 (44%), Positives = 220/349 (63%), Gaps = 19/349 (5%)
Query: 58 IPKRISLFQSLQSEQQARLQSLPHDPIKITLPDGSVKEGKRWETSPMDIAQGISKSLAAN 117
+ +RI +++SL+++ L+ + +PI +TLPDG V G + +T+P DIA+GIS+ LA +
Sbjct: 50 VKERIEIWESLKAKHLESLKDMKEEPINVTLPDGKVVAGIKNKTTPYDIAKGISRGLADS 109
Query: 118 ALISMVNG-VLWDMTRPLEADCDLKLFTFDSDEGRDTFWHSSAHILGQAIEQQYGCKLCI 176
+ S VNG +WD++RPLEADC+L+L FDS+EG+ TFWHSSAHILGQA+E+ YG +LCI
Sbjct: 110 IVSSKVNGEQIWDISRPLEADCNLQLCKFDSEEGKKTFWHSSAHILGQAMERIYGGQLCI 169
Query: 177 GPCTTRGEGFYYDAFYGDLGLNPDHFKSIDSEADKAA--KQPFERIEVTRDQALEMFSDN 234
GP T+ EGFYYD GD ++ + +K I+ A K KQPFER+ V RD AL MF N
Sbjct: 170 GPATS--EGFYYDMAMGDKIVSAEDYKLINEVAQKIVQEKQPFERLAVPRDIALTMFKFN 227
Query: 235 NFKVEIINDLPADKTITVYRCGPLVDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKDRES 294
+K EII+ +P + T+++YRCG LVDLCRGPH+PNTS++K F K SSAYW G + +
Sbjct: 228 KYKTEIISKIPQEDTVSLYRCGTLVDLCRGPHVPNTSYIKSFAVTKNSSAYWLGKAENDD 287
Query: 295 LQRVYGISYPDKKRL---KHAFAELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHI 351
LQRVYGIS+PDKK++ ++ E LR HRN G L + A
Sbjct: 288 LQRVYGISFPDKKQMEEYENFMREAALR------DHRN--VGKAQELFFFHPYSPGSAFF 339
Query: 352 FCRESQIKDEVRGVLEFIDYAYRIFGFTYELKLSTRPEKYLGDLATWEK 400
++I ++ ++EFI Y GFT + S +K W+K
Sbjct: 340 LPHGTRIYNK---LVEFIREEYHRRGFTEVISPSIFSQKLWEQSGHWQK 385
>sp|P04801|SYTC_YEAST Threonine--tRNA ligase, cytoplasmic OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=THS1 PE=1 SV=2
Length = 734
Score = 346 bits (888), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 169/328 (51%), Positives = 219/328 (66%), Gaps = 40/328 (12%)
Query: 307 KRLKHAFAELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVL 366
K + ++ ELP R+ADFGV+HRNE SGAL+GLTRVRRFQQDDAHIFC QI+ E+ +
Sbjct: 428 KSRERSYRELPWRVADFGVIHRNEFSGALSGLTRVRRFQQDDAHIFCTHDQIESEIENIF 487
Query: 367 EFIDYAYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFY 426
F+ Y Y +FGF ++++LSTRPEKY+G + TW+ AE+ L AL ++G W+IN GDGAFY
Sbjct: 488 NFLQYIYGVFGFEFKMELSTRPEKYVGKIETWDAAESKLESALKKWGGNWEINAGDGAFY 547
Query: 427 GPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDE--AKTERPVMIHRAILGSVE 484
GPKIDI +SDAL+R QCAT+QLDFQLP+RF L + ++D+ ERPVMIHRAILGSVE
Sbjct: 548 GPKIDIMISDALRRWHQCATIQLDFQLPNRFELEFKSKDQDSESYERPVMIHRAILGSVE 607
Query: 485 RMFAILLEHYKGKWPFWLSPRQAIVCPVSEKSQPYALQVRDHIYRAGYYVDVDTTDRKIQ 544
RM AIL EH+ GKWPFWLSPRQ +V PV K Q YA VR+ ++ AG+Y DVD T +Q
Sbjct: 608 RMTAILTEHFAGKWPFWLSPRQVLVVPVGVKYQGYAEDVRNKLHDAGFYADVDLTGNTLQ 667
Query: 545 KKPNSFVHARSTYIEVVFSCWEELVAGINIYPIRVSVREAQLAQYNFILVVGEEEAKSGQ 604
KK VR Q+ +YNFI +VGE+E
Sbjct: 668 KK----------------------------------VRNGQMLKYNFIFIVGEQEMNEKS 693
Query: 605 VSVRVRD----QGDHSNMSIEDLLKHFK 628
V++R RD QG ++ +S+E++LK +
Sbjct: 694 VNIRNRDVMEQQGKNATVSVEEVLKQLR 721
Score = 230 bits (587), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 120/269 (44%), Positives = 167/269 (62%), Gaps = 19/269 (7%)
Query: 58 IPKRISLFQSLQSEQQARLQSLPHDPIKITLPDGSVKEGKRWETSPMDIAQGISKSLAAN 117
I +RI +F LQ E ++ S+P P+KI L DG+VKE WET+PMDIA+GISKSLA
Sbjct: 49 IEERIEMFDRLQKEYNDKVASMPRVPLKIVLKDGAVKEATSWETTPMDIAKGISKSLADR 108
Query: 118 ALISMVNGVLWDMTRPLEADCD----LKLFTFDSDEGRDTFWHSSAHILGQAIEQQYGCK 173
IS VNG LWD+ RP E + + L+L F+SDEG+ FWHSSAH+LG++ E G
Sbjct: 109 LCISKVNGQLWDLDRPFEGEANEEIKLELLDFESDEGKKVFWHSSAHVLGESCECHLGAH 168
Query: 174 LCIGPCTTRGEGFYYDAF----YGDLGLNPDH------FKSIDSEADKA--AKQPFERIE 221
+C+GP T +GF+Y+ D+ +P+ F ++ A KQ FER+
Sbjct: 169 ICLGPPTD--DGFFYEMAVRDSMKDISESPERTVSQADFPGLEGVAKNVIKQKQKFERLV 226
Query: 222 VTRDQALEMFSDNNFKVEII-NDLPADKTITVYRCGPLVDLCRGPHIPNTSFVKGFGCLK 280
++++ L+MF + +K ++ +P TVYRCG L+DLC GPHIP+T +K F LK
Sbjct: 227 MSKEDLLKMFHYSKYKTYLVQTKVPDGGATTVYRCGKLIDLCVGPHIPHTGRIKAFKLLK 286
Query: 281 ASSAYWRGNKDRESLQRVYGISYPDKKRL 309
SS Y+ G+ +SLQRVYGIS+PDKK +
Sbjct: 287 NSSCYFLGDATNDSLQRVYGISFPDKKLM 315
>sp|Q9D0R2|SYTC_MOUSE Threonine--tRNA ligase, cytoplasmic OS=Mus musculus GN=Tars PE=1
SV=2
Length = 722
Score = 345 bits (886), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 168/318 (52%), Positives = 212/318 (66%), Gaps = 33/318 (10%)
Query: 312 AFAELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDY 371
++ ELPLRLADFGVLHRNE SGALTGLTRVRRFQQDDAHIFC QI+DE++G L+F+
Sbjct: 425 SWRELPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDEIKGCLDFLRT 484
Query: 372 AYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKID 431
Y +FGF+++L LSTRPEK+LGD+ W +AE L +LNEFG+ W++N GDGAFYGPKID
Sbjct: 485 VYSVFGFSFKLNLSTRPEKFLGDIEIWNQAEKQLENSLNEFGEKWELNPGDGAFYGPKID 544
Query: 432 ISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILL 491
I + DA+ R QCAT+QLDFQLP RFNL Y + D +RPV++HRAILGSVERM AIL
Sbjct: 545 IQIKDAIGRYHQCATIQLDFQLPIRFNLTYVSHDGDDKKRPVIVHRAILGSVERMIAILT 604
Query: 492 EHYKGKWPFWLSPRQAIVCPVSEKSQPYALQVRDHIYRAGYYVDVDTTDRKIQKKPNSFV 551
E+Y GKWPFWLSPRQ +V PV YA +VR + A + D D P +
Sbjct: 605 ENYGGKWPFWLSPRQVMVVPVGPTCDEYAQKVRQQFHDAKFMADTDL-------DPGCTL 657
Query: 552 HARSTYIEVVFSCWEELVAGINIYPIRVSVREAQLAQYNFILVVGEEEAKSGQVSVRVRD 611
+ + +R AQLAQYNFILVVGE+E SG V++R RD
Sbjct: 658 NKK--------------------------IRNAQLAQYNFILVVGEKEKASGTVNIRTRD 691
Query: 612 QGDHSNMSIEDLLKHFKE 629
H ++E+ ++ ++
Sbjct: 692 NKVHGERTVEETVRRLQQ 709
Score = 242 bits (618), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 118/258 (45%), Positives = 165/258 (63%), Gaps = 7/258 (2%)
Query: 58 IPKRISLFQSLQSEQQARLQ---SLPHDPIKITLPDGSVKEGKRWETSPMDIAQGISKSL 114
I R+ ++ L++E + L + PIK+TLPDG + + W+T+P IA GIS+ L
Sbjct: 53 INTRLDMYNKLKAEHDSILAEKAAKDSKPIKVTLPDGKQVDAESWKTTPYQIACGISQGL 112
Query: 115 AANALISMVNGVLWDMTRPLEADCDLKLFTFDSDEGRDTFWHSSAHILGQAIEQQYGCKL 174
A N +++ VN V+WD+ RPLE DC L+L F+ +E + +WHSSAHI+G+A+E+ YG L
Sbjct: 113 ADNTVVAKVNKVVWDLDRPLETDCTLELLKFEDEEAQAVYWHSSAHIMGEAMERVYGGCL 172
Query: 175 CIGPCTTRGEGFYYDAFYGDLGLNPDHFKSIDSEADK--AAKQPFERIEVTRDQALEMFS 232
C GP GFYYD + + G++ + F S+++ K KQ FER+EV ++ LEMF
Sbjct: 173 CYGPPIEN--GFYYDMYLEEGGVSSNDFSSLETLCKKIIKEKQTFERLEVKKETLLEMFK 230
Query: 233 DNNFKVEIINDLPADKTITVYRCGPLVDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKDR 292
N FK I+N+ T TVYRCGPL+DLCRGPH+ +T +K K SS YW G D
Sbjct: 231 YNKFKCRILNEKVNTPTTTVYRCGPLIDLCRGPHVRHTGKIKTLKIHKNSSTYWEGKADM 290
Query: 293 ESLQRVYGISYPDKKRLK 310
E+LQR+YGIS+PD K LK
Sbjct: 291 ETLQRIYGISFPDPKLLK 308
>sp|Q5XHY5|SYTC_RAT Threonine--tRNA ligase, cytoplasmic OS=Rattus norvegicus GN=Tars
PE=2 SV=1
Length = 695
Score = 345 bits (884), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 168/318 (52%), Positives = 213/318 (66%), Gaps = 33/318 (10%)
Query: 312 AFAELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDY 371
++ ELPLRLADFGVLHRNE SGALTGLTRVRRFQQDDAHIFC QI+DE++G L+F+
Sbjct: 398 SWRELPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDEIKGCLDFLRT 457
Query: 372 AYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKID 431
Y +FGF+++L LSTRPEK+LGD+ W +AE L +LNEFG+ W++N GDGAFYGPKID
Sbjct: 458 VYSVFGFSFKLNLSTRPEKFLGDIEIWNQAEKQLENSLNEFGEKWELNPGDGAFYGPKID 517
Query: 432 ISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILL 491
I + DA+ R QCAT+QLDFQLP RFNL Y + D +RPV++HRAILGSVERM AIL
Sbjct: 518 IQIKDAIGRYHQCATIQLDFQLPIRFNLTYVSHDGDDKKRPVIVHRAILGSVERMIAILT 577
Query: 492 EHYKGKWPFWLSPRQAIVCPVSEKSQPYALQVRDHIYRAGYYVDVDTTDRKIQKKPNSFV 551
E+Y GKWPFWLSPRQ +V PV YA +VR + A + VD+D P +
Sbjct: 578 ENYGGKWPFWLSPRQVMVVPVGPTCDEYAQKVRQEFHDAKFMVDIDLD-------PGCTL 630
Query: 552 HARSTYIEVVFSCWEELVAGINIYPIRVSVREAQLAQYNFILVVGEEEAKSGQVSVRVRD 611
+ + +R AQLAQYNFILVVGE+E SG V++R RD
Sbjct: 631 NKK--------------------------IRNAQLAQYNFILVVGEKEKASGTVNIRTRD 664
Query: 612 QGDHSNMSIEDLLKHFKE 629
H ++ + ++ ++
Sbjct: 665 NKVHGERTVGETVERLQQ 682
Score = 242 bits (618), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 118/258 (45%), Positives = 165/258 (63%), Gaps = 7/258 (2%)
Query: 58 IPKRISLFQSLQSEQQARLQ---SLPHDPIKITLPDGSVKEGKRWETSPMDIAQGISKSL 114
I R+ ++ L++E + L + PIK+TLPDG + + W+T+P IA GIS+ L
Sbjct: 26 INTRLDMYHKLKAEHDSILAEKAAKDSKPIKVTLPDGKQVDAESWKTTPYQIACGISQGL 85
Query: 115 AANALISMVNGVLWDMTRPLEADCDLKLFTFDSDEGRDTFWHSSAHILGQAIEQQYGCKL 174
A N +++ VN V+WD+ RPLE DC L+L F+ +E + +WHSSAHI+G+A+E+ YG L
Sbjct: 86 ADNTVVAKVNKVVWDLDRPLETDCTLELLKFEDEEAQAVYWHSSAHIMGEAMERVYGGCL 145
Query: 175 CIGPCTTRGEGFYYDAFYGDLGLNPDHFKSIDSEADK--AAKQPFERIEVTRDQALEMFS 232
C GP GFYYD + + G++ + F S+++ K KQ FER+EV ++ LEMF
Sbjct: 146 CYGPPIEN--GFYYDMYLEEGGVSSNDFSSLETLCKKIIKEKQTFERLEVKKETLLEMFK 203
Query: 233 DNNFKVEIINDLPADKTITVYRCGPLVDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKDR 292
N FK I+N+ T TVYRCGPL+DLCRGPH+ +T +K K SS YW G D
Sbjct: 204 YNKFKCRILNEKVNTPTTTVYRCGPLIDLCRGPHVRHTGKIKTLKIHKNSSTYWEGKADM 263
Query: 293 ESLQRVYGISYPDKKRLK 310
E+LQR+YGIS+PD K LK
Sbjct: 264 ETLQRIYGISFPDPKLLK 281
>sp|P26639|SYTC_HUMAN Threonine--tRNA ligase, cytoplasmic OS=Homo sapiens GN=TARS PE=1
SV=3
Length = 723
Score = 344 bits (883), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 168/318 (52%), Positives = 213/318 (66%), Gaps = 33/318 (10%)
Query: 312 AFAELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDY 371
++ ELPLRLADFGVLHRNE SGALTGLTRVRRFQQDDAHIFC QI+DE++G L+F+
Sbjct: 426 SWRELPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDEIKGCLDFLRT 485
Query: 372 AYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKID 431
Y +FGF+++L LSTRPEK+LGD+ W++AE L +LNEFG+ W++N GDGAFYGPKID
Sbjct: 486 VYSVFGFSFKLNLSTRPEKFLGDIEVWDQAEKQLENSLNEFGEKWELNSGDGAFYGPKID 545
Query: 432 ISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILL 491
I + DA+ R QCAT+QLDFQLP RFNL Y + D +RPV++HRAILGSVERM AIL
Sbjct: 546 IQIKDAIGRYHQCATIQLDFQLPIRFNLTYVSHDGDDKKRPVIVHRAILGSVERMIAILT 605
Query: 492 EHYKGKWPFWLSPRQAIVCPVSEKSQPYALQVRDHIYRAGYYVDVDTTDRKIQKKPNSFV 551
E+Y GKWPFWLSPRQ +V PV YA +VR + A + D+D P +
Sbjct: 606 ENYGGKWPFWLSPRQVMVVPVGPTCDEYAQKVRQQFHDAKFMADIDLD-------PGCTL 658
Query: 552 HARSTYIEVVFSCWEELVAGINIYPIRVSVREAQLAQYNFILVVGEEEAKSGQVSVRVRD 611
+ + +R AQLAQYNFILVVGE+E SG V++R RD
Sbjct: 659 NKK--------------------------IRNAQLAQYNFILVVGEKEKISGTVNIRTRD 692
Query: 612 QGDHSNMSIEDLLKHFKE 629
H +I + ++ ++
Sbjct: 693 NKVHGERTISETIERLQQ 710
Score = 240 bits (613), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 118/258 (45%), Positives = 163/258 (63%), Gaps = 7/258 (2%)
Query: 58 IPKRISLFQSLQSEQQARLQSLPHD---PIKITLPDGSVKEGKRWETSPMDIAQGISKSL 114
I R+ ++ L++E + L PIK+TLPDG + + W+T+P IA GIS+ L
Sbjct: 54 IYTRLEMYNILKAEHDSILAEKAEKDSKPIKVTLPDGKQVDAESWKTTPYQIACGISQGL 113
Query: 115 AANALISMVNGVLWDMTRPLEADCDLKLFTFDSDEGRDTFWHSSAHILGQAIEQQYGCKL 174
A N +I+ VN V+WD+ RPLE DC L+L F+ +E + +WHSSAHI+G+A+E+ YG L
Sbjct: 114 ADNTVIAKVNNVVWDLDRPLEEDCTLELLKFEDEEAQAVYWHSSAHIMGEAMERVYGGCL 173
Query: 175 CIGPCTTRGEGFYYDAFYGDLGLNPDHFKSIDSEADK--AAKQPFERIEVTRDQALEMFS 232
C GP GFYYD + + G++ + F S+++ K KQ FER+EV ++ L MF
Sbjct: 174 CYGPPIEN--GFYYDMYLEEGGVSSNDFSSLEALCKKIIKEKQAFERLEVKKETLLAMFK 231
Query: 233 DNNFKVEIINDLPADKTITVYRCGPLVDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKDR 292
N FK I+N+ T TVYRCGPL+DLCRGPH+ +T +K K SS YW G D
Sbjct: 232 YNKFKCRILNEKVNTPTTTVYRCGPLIDLCRGPHVRHTGKIKALKIHKNSSTYWEGKADM 291
Query: 293 ESLQRVYGISYPDKKRLK 310
E+LQR+YGIS+PD K LK
Sbjct: 292 ETLQRIYGISFPDPKMLK 309
>sp|Q3ZBV8|SYTC_BOVIN Threonine--tRNA ligase, cytoplasmic OS=Bos taurus GN=TARS PE=2 SV=1
Length = 723
Score = 343 bits (880), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 167/318 (52%), Positives = 213/318 (66%), Gaps = 33/318 (10%)
Query: 312 AFAELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDY 371
++ ELPLR+ADFGVLHRNE SGALTGLTRVRRFQQDDAHIFC QI+DE++G L+F+
Sbjct: 426 SWRELPLRVADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDEIKGCLDFLRT 485
Query: 372 AYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKID 431
Y IFGF+++L LSTRPEK+LGD+ W +AE L +LN+FG+ W++N GDGAFYGPKID
Sbjct: 486 VYSIFGFSFKLNLSTRPEKFLGDIEVWNQAEKQLENSLNDFGEKWELNPGDGAFYGPKID 545
Query: 432 ISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILL 491
I + DA+ R QCAT+QLDFQLP RFNL + + D ++PV+IHRAILGSVERM AIL
Sbjct: 546 IQIKDAIGRYHQCATIQLDFQLPIRFNLTFVSHDGDDKKKPVIIHRAILGSVERMIAILT 605
Query: 492 EHYKGKWPFWLSPRQAIVCPVSEKSQPYALQVRDHIYRAGYYVDVDTTDRKIQKKPNSFV 551
E+Y GKWPFWLSPRQ +V PV YA +VR + A + VD+D P +
Sbjct: 606 ENYGGKWPFWLSPRQVMVVPVGPTCDEYAQKVRQQFHNAKFMVDIDLD-------PGCTL 658
Query: 552 HARSTYIEVVFSCWEELVAGINIYPIRVSVREAQLAQYNFILVVGEEEAKSGQVSVRVRD 611
+ + +R AQLAQYNFILVVGE+E SG V++R RD
Sbjct: 659 NKK--------------------------IRNAQLAQYNFILVVGEKEKTSGTVNIRTRD 692
Query: 612 QGDHSNMSIEDLLKHFKE 629
H +I + ++ ++
Sbjct: 693 NKVHGERTISETIERLQQ 710
Score = 241 bits (616), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 118/258 (45%), Positives = 163/258 (63%), Gaps = 7/258 (2%)
Query: 58 IPKRISLFQSLQSEQQARLQSLPHD---PIKITLPDGSVKEGKRWETSPMDIAQGISKSL 114
I R+ ++ L++E + L PIK+TLPDG + + W+T+P IA GIS+ L
Sbjct: 54 INTRLEMYNKLKAEHDSILAEKAEKDSKPIKVTLPDGKQVDAESWKTTPYQIACGISQGL 113
Query: 115 AANALISMVNGVLWDMTRPLEADCDLKLFTFDSDEGRDTFWHSSAHILGQAIEQQYGCKL 174
A N +I+ VN +WD+ RPLE DC L+L F+ +E + +WHSSAHI+G+A+E+ YG L
Sbjct: 114 ADNTVIAKVNKAVWDLDRPLEEDCTLELLKFEDEEAQAVYWHSSAHIMGEAMERVYGGCL 173
Query: 175 CIGPCTTRGEGFYYDAFYGDLGLNPDHFKSIDSEADK--AAKQPFERIEVTRDQALEMFS 232
C GP G FYYD + + G++ + F S+++ K KQ FER+EV ++ LEMF
Sbjct: 174 CYGPPIENG--FYYDMYLEEGGVSSNDFSSLETLCKKIIKEKQAFERLEVKKETLLEMFK 231
Query: 233 DNNFKVEIINDLPADKTITVYRCGPLVDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKDR 292
N FK I+N+ T TVYRCGPL+DLCRGPH+ +T +K K SS YW G D
Sbjct: 232 YNKFKCRILNEKVNTPTTTVYRCGPLIDLCRGPHVRHTGKIKTLKIHKNSSTYWEGKSDM 291
Query: 293 ESLQRVYGISYPDKKRLK 310
E+LQR+YGIS+PD K LK
Sbjct: 292 ETLQRIYGISFPDPKMLK 309
>sp|P52709|SYTC_CAEEL Threonine--tRNA ligase, cytoplasmic OS=Caenorhabditis elegans
GN=trs-1 PE=2 SV=1
Length = 725
Score = 341 bits (875), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 168/321 (52%), Positives = 221/321 (68%), Gaps = 35/321 (10%)
Query: 309 LKHAFAELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEF 368
+ H + ELP R ADFGVLHRNE SGALTGLTRVRRFQQDDAHIFCR+ QI +E++ L+F
Sbjct: 422 MPHTYNELPFRFADFGVLHRNEMSGALTGLTRVRRFQQDDAHIFCRQDQISEEIKQCLDF 481
Query: 369 IDYAY-RIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYG 427
++YAY ++FGFT++L LSTRPE +LG++ TW+KAEA LT ALN G+ W +N GDGAFYG
Sbjct: 482 LEYAYEKVFGFTFKLNLSTRPEGFLGNIETWDKAEADLTNALNASGRKWVLNPGDGAFYG 541
Query: 428 PKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMF 487
PKIDI++ DALKR FQCAT+QLDFQLP++F+L Y E + + +RPVMIHRA+LGSVERM
Sbjct: 542 PKIDITIQDALKRNFQCATIQLDFQLPNQFDLSYFDE-KGEKQRPVMIHRAVLGSVERMT 600
Query: 488 AILLEHYKGKWPFWLSPRQAIVCPVSEKSQPYALQVRDHIYRAGYYVDVDTTDRKIQKKP 547
AIL E Y GKWPFWLSPRQ + V E + YA V+ I+ AG+ ++ +
Sbjct: 601 AILTESYGGKWPFWLSPRQCKIITVHESVRDYANDVKKQIFEAGFEIEYEE--------- 651
Query: 548 NSFVHARSTYIEVVFSCWEELVAGINIYPIRVSVREAQLAQYNFILVVGEEEAKSGQVSV 607
+C + + VR+AQLAQ+NFILV+G +E ++G V+V
Sbjct: 652 ---------------NCGDTM---------NKQVRKAQLAQFNFILVIGAKEKENGTVNV 687
Query: 608 RVRDQGDHSNMSIEDLLKHFK 628
R RD ++++ L+ F+
Sbjct: 688 RTRDNAVRGEVALDKLISKFR 708
Score = 264 bits (674), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 128/255 (50%), Positives = 167/255 (65%), Gaps = 4/255 (1%)
Query: 58 IPKRISLFQSLQSEQQARLQSLPHDPIKITLPDGSVKEGKRWETSPMDIAQGISKSLAAN 117
I +RI L+ L++E A + + +PI+ITLPDG + EGK W T+P +IA+ ISK LA
Sbjct: 56 IEERIKLWDKLKAEYDAEIAAKESEPIQITLPDGKIHEGKTWRTTPFEIAERISKGLAEA 115
Query: 118 ALISMVNGVLWDMTRPLEADCDLKLFTFDSDEGRDTFWHSSAHILGQAIEQQYGCKLCIG 177
A+I+ VNG +WD+ RP E + L+L FD DE + FWHSSAH+LG+A+E+ G LC G
Sbjct: 116 AVIAKVNGAVWDLDRPFEGNAKLELLKFDDDEAKQVFWHSSAHVLGEAMERYCGGHLCYG 175
Query: 178 PCTTRGEGFYYDAFYGDLGLNPDHFKSIDSEADKAA--KQPFERIEVTRDQALEMFSDNN 235
P EGFYYD ++ + + PD F ID A KQ FER+E+T++ LEMF N
Sbjct: 176 PPIQ--EGFYYDMWHENRTICPDDFPKIDQIVKAAVKDKQKFERLEMTKEDLLEMFKYNE 233
Query: 236 FKVEIINDLPADKTITVYRCGPLVDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKDRESL 295
FKV II + TVYRCGPL+DLCRGPH+ +T VK K SS+YW G D ESL
Sbjct: 234 FKVRIITEKIHTPKTTVYRCGPLIDLCRGPHVRHTGKVKAMAITKNSSSYWEGKADAESL 293
Query: 296 QRVYGISYPDKKRLK 310
QR+YGIS+PD K+LK
Sbjct: 294 QRLYGISFPDSKQLK 308
>sp|Q8BLY2|SYTC2_MOUSE Probable threonine--tRNA ligase 2, cytoplasmic OS=Mus musculus
GN=Tarsl2 PE=2 SV=1
Length = 790
Score = 338 bits (868), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 167/317 (52%), Positives = 207/317 (65%), Gaps = 33/317 (10%)
Query: 312 AFAELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDY 371
++ E+P+R ADFGVLHRNE SG L+GLTRVRRFQQDDAHIFC QI++E++G L F+
Sbjct: 493 SWREMPVRFADFGVLHRNELSGTLSGLTRVRRFQQDDAHIFCMVEQIEEEIKGCLHFLQS 552
Query: 372 AYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKID 431
Y FGF+++L LSTRPE +LG++ W++AE L +L EFGKPW+IN GDGAFYGPKID
Sbjct: 553 VYSTFGFSFQLNLSTRPEHFLGEIEIWDEAERQLQNSLVEFGKPWKINPGDGAFYGPKID 612
Query: 432 ISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILL 491
I + DA+ R QCAT+QLDFQLP RFNL Y ++D RPV+IHRAILGSVERM AIL
Sbjct: 613 IKIKDAIGRYHQCATIQLDFQLPIRFNLTYVSKDGDDKNRPVIIHRAILGSVERMIAILS 672
Query: 492 EHYKGKWPFWLSPRQAIVCPVSEKSQPYALQVRDHIYRAGYYVDVDTTDRKIQKKPNSFV 551
E+Y GKWP WLSPRQ +V PV + YALQV + G+ DVD D
Sbjct: 673 ENYGGKWPLWLSPRQVMVIPVGPACENYALQVSKECFEEGFMADVDLDD----------- 721
Query: 552 HARSTYIEVVFSCWEELVAGINIYPIRVSVREAQLAQYNFILVVGEEEAKSGQVSVRVRD 611
SC + +R AQLAQYNFILVVGE+E + V+VR RD
Sbjct: 722 -----------SC-----------TLNKKIRNAQLAQYNFILVVGEKEKINNAVNVRTRD 759
Query: 612 QGDHSNMSIEDLLKHFK 628
H +SI +++ K
Sbjct: 760 NKIHGEISIASVIEKLK 776
Score = 239 bits (609), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 114/259 (44%), Positives = 166/259 (64%), Gaps = 8/259 (3%)
Query: 58 IPKRISLFQSLQSEQQ----ARLQSLPHDPIKITLPDGSVKEGKRWETSPMDIAQGISKS 113
I +R+ LF++L+++ Q + + ++ I + + G +G+RW+T+P +A GISK
Sbjct: 120 IKERLQLFETLKTDHQLLPATQEKKNTNNVISVRVAGGKTVQGERWKTTPYQVAAGISKE 179
Query: 114 LAANALISMVNGVLWDMTRPLEADCDLKLFTFDSDEGRDTFWHSSAHILGQAIEQQYGCK 173
LA + +I+ VNGVLWD+ RPLE D ++L FD++E + +WHSSAHILG+A+E YG
Sbjct: 180 LAEHTVIAKVNGVLWDLDRPLEGDSTVELLMFDNEEAQAVYWHSSAHILGEAMELYYGGH 239
Query: 174 LCIGPCTTRGEGFYYDAFYGDLGLNPDHFKSIDS--EADKAAKQPFERIEVTRDQALEMF 231
LC GP GFYYD F D ++ ++++ + KQPFER+EV++D LEMF
Sbjct: 240 LCYGPPIE--NGFYYDMFIEDRVVSSTELSALENICKTIIKEKQPFERLEVSKDTLLEMF 297
Query: 232 SDNNFKVEIINDLPADKTITVYRCGPLVDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKD 291
N FK I+ + T TVYRCGPL+DLC+GPH+ +T +K K SS YW GN +
Sbjct: 298 KYNKFKCRILKEKVDTPTTTVYRCGPLIDLCKGPHVRHTGKIKAIKIFKNSSTYWEGNPE 357
Query: 292 RESLQRVYGISYPDKKRLK 310
E+LQR+YGIS+PD K +K
Sbjct: 358 METLQRIYGISFPDSKMMK 376
>sp|Q0V9S0|SYTC2_XENTR Probable threonine--tRNA ligase 2, cytoplasmic OS=Xenopus
tropicalis GN=tarsl2 PE=2 SV=1
Length = 814
Score = 335 bits (859), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 165/317 (52%), Positives = 207/317 (65%), Gaps = 33/317 (10%)
Query: 312 AFAELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDY 371
++ ELPLR ADFGVLHRNE SG L+GLTRVRRFQQDDAHIFC QI++E+ G L+F+
Sbjct: 517 SWRELPLRFADFGVLHRNELSGTLSGLTRVRRFQQDDAHIFCTMDQIQEEMNGCLQFLQS 576
Query: 372 AYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKID 431
Y++FGFT++L LSTRPE YLG++ W +AE L +LN+FG+PW++N GDGAFYGPKID
Sbjct: 577 VYKVFGFTFQLHLSTRPENYLGEIEIWNEAEKQLESSLNQFGEPWKLNPGDGAFYGPKID 636
Query: 432 ISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILL 491
I + DA+ R QCAT+QLDFQLP RFNL Y ++D +RPV+IHRAILGSVERM AIL
Sbjct: 637 IKIKDAIGRYHQCATIQLDFQLPIRFNLTYVSKDGDDKKRPVIIHRAILGSVERMIAILC 696
Query: 492 EHYKGKWPFWLSPRQAIVCPVSEKSQPYALQVRDHIYRAGYYVDVDTTDRKIQKKPNSFV 551
E+Y GKWPFWLSPRQ +V PV YA QV ++ AG+ +VD
Sbjct: 697 ENYGGKWPFWLSPRQVMVIPVGPSCDEYAQQVCKDVFEAGFMAEVD-------------- 742
Query: 552 HARSTYIEVVFSCWEELVAGINIYPIRVSVREAQLAQYNFILVVGEEEAKSGQVSVRVRD 611
+ SC + +R AQLAQ NFILVVGE+E V+VR RD
Sbjct: 743 --------LDHSC-----------TLNKKIRNAQLAQCNFILVVGEKEKTDSAVNVRTRD 783
Query: 612 QGDHSNMSIEDLLKHFK 628
H + + ++ K
Sbjct: 784 NKVHGEILLTSAIEKLK 800
Score = 248 bits (634), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 123/258 (47%), Positives = 168/258 (65%), Gaps = 7/258 (2%)
Query: 58 IPKRISLFQSLQSEQQARLQSLP---HDPIKITLPDGSVKEGKRWETSPMDIAQGISKSL 114
I R++L+++L++E A L + PIKITL DG +G+ W+T+P +A GISK L
Sbjct: 145 IKDRLALYETLKNEHDALLAARAAHQSKPIKITLADGKQVDGESWKTTPYQVAIGISKGL 204
Query: 115 AANALISMVNGVLWDMTRPLEADCDLKLFTFDSDEGRDTFWHSSAHILGQAIEQQYGCKL 174
A N +I+ VN LWD+ RPLE D +++L FDS+E + +WHSSAHILG+ +E YG L
Sbjct: 205 ADNVVIAKVNNELWDLDRPLEQDSNVELLKFDSEEAQAVYWHSSAHILGETMENFYGGCL 264
Query: 175 CIGPCTTRGEGFYYDAFYGDLGLNPDHFKSIDS--EADKAAKQPFERIEVTRDQALEMFS 232
C GP G FYYD + G++ + F S+++ +A KQPFER+EV++D LEMF
Sbjct: 265 CYGPPIENG--FYYDMYLDGRGVSSNEFPSLENMCKAIIKEKQPFERLEVSKDLLLEMFK 322
Query: 233 DNNFKVEIINDLPADKTITVYRCGPLVDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKDR 292
N FK I+N+ T TVYRCGPL+DLCRGPH+ +T +K K SS YW G D
Sbjct: 323 YNKFKCRILNEKVDTPTTTVYRCGPLIDLCRGPHVRHTGKIKTLKIYKNSSTYWEGRADM 382
Query: 293 ESLQRVYGISYPDKKRLK 310
E+LQR+YGIS+PD K +K
Sbjct: 383 ETLQRIYGISFPDSKLMK 400
>sp|A2RTX5|SYTC2_HUMAN Probable threonine--tRNA ligase 2, cytoplasmic OS=Homo sapiens
GN=TARSL2 PE=1 SV=1
Length = 802
Score = 332 bits (850), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 162/317 (51%), Positives = 205/317 (64%), Gaps = 33/317 (10%)
Query: 312 AFAELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDY 371
++ E+P+R ADFGVLHRNE SG L+GLTRVRRFQQDDAHIFC QI++E++G L+F+
Sbjct: 505 SWREMPIRFADFGVLHRNELSGTLSGLTRVRRFQQDDAHIFCTVEQIEEEIKGCLQFLQS 564
Query: 372 AYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKID 431
Y FGF+++L LSTRPE +LG++ W +AE L +L +FG+PW++N GDGAFYGPKID
Sbjct: 565 VYSTFGFSFQLNLSTRPENFLGEIEMWNEAEKQLQNSLMDFGEPWKMNPGDGAFYGPKID 624
Query: 432 ISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILL 491
I + DA+ R QCAT+QLDFQLP RFNL Y ++D +RPV+IHRAILGSVERM AIL
Sbjct: 625 IKIKDAIGRYHQCATIQLDFQLPIRFNLTYVSKDGDDKKRPVIIHRAILGSVERMIAILS 684
Query: 492 EHYKGKWPFWLSPRQAIVCPVSEKSQPYALQVRDHIYRAGYYVDVDTTDRKIQKKPNSFV 551
E+Y GKWPFWLSPRQ +V PV + YALQV + G+ DVD
Sbjct: 685 ENYGGKWPFWLSPRQVMVIPVGPTCEKYALQVSSEFFEEGFMADVD-------------- 730
Query: 552 HARSTYIEVVFSCWEELVAGINIYPIRVSVREAQLAQYNFILVVGEEEAKSGQVSVRVRD 611
+ SC + +R AQLAQYNFILVVGE+E V+VR RD
Sbjct: 731 --------LDHSC-----------TLNKKIRNAQLAQYNFILVVGEKEKIDNAVNVRTRD 771
Query: 612 QGDHSNMSIEDLLKHFK 628
H + + + K
Sbjct: 772 NKIHGEILVTSAIDKLK 788
Score = 234 bits (597), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 114/260 (43%), Positives = 164/260 (63%), Gaps = 9/260 (3%)
Query: 58 IPKRISLFQSLQSEQQARL-----QSLPHDPIKITLPDGSVKEGKRWETSPMDIAQGISK 112
I +R+ LF+ L+ + Q L + + I + + DG +G+ W+T+P +A IS+
Sbjct: 131 IKERLKLFEILKKDHQLLLAIYGKKGDTSNIITVRVADGQTVQGEVWKTTPYQVAAEISQ 190
Query: 113 SLAANALISMVNGVLWDMTRPLEADCDLKLFTFDSDEGRDTFWHSSAHILGQAIEQQYGC 172
LA + +I+ VNG LWD+ RPLE D L+L TFD++E + +WHSSAHILG+A+E YG
Sbjct: 191 ELAESTVIAKVNGELWDLDRPLEGDSSLELLTFDNEEAQAVYWHSSAHILGEAMELYYGG 250
Query: 173 KLCIGPCTTRGEGFYYDAFYGDLGLNPDHFKSIDS--EADKAAKQPFERIEVTRDQALEM 230
LC GP G FYYD F D ++ ++++ +A KQPFER+EV+++ LEM
Sbjct: 251 HLCYGPPIENG--FYYDMFIEDRAVSSTELSALENICKAIIKEKQPFERLEVSKEILLEM 308
Query: 231 FSDNNFKVEIINDLPADKTITVYRCGPLVDLCRGPHIPNTSFVKGFGCLKASSAYWRGNK 290
F N FK I+N+ T TVYRCGPL+DLC+GPH+ +T +K K SS YW GN
Sbjct: 309 FKYNKFKCRILNEKVNTATTTVYRCGPLIDLCKGPHVRHTGKIKTIKIFKNSSTYWEGNP 368
Query: 291 DRESLQRVYGISYPDKKRLK 310
+ E+LQR+YGIS+PD K ++
Sbjct: 369 EMETLQRIYGISFPDNKMMR 388
>sp|Q8MP20|SYTC2_DICDI Probable threonine--tRNA ligase 2, cytoplasmic OS=Dictyostelium
discoideum GN=thrS2 PE=3 SV=1
Length = 698
Score = 331 bits (849), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 168/346 (48%), Positives = 212/346 (61%), Gaps = 55/346 (15%)
Query: 312 AFAELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDY 371
++ ELP+R+ADFGVLHRNE G+L+GLTRVRRFQQDDAHIFC I++E++ L+F+ Y
Sbjct: 386 SYKELPMRIADFGVLHRNETHGSLSGLTRVRRFQQDDAHIFCTPDMIREEIKQCLDFMKY 445
Query: 372 AYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEF-GKPWQINEGDGAFYGPKI 430
Y IF FT+ L+LSTRP+ YLG+L+ WEKAE +L++ L EF G W IN GDGAFYGPKI
Sbjct: 446 VYTIFNFTFHLELSTRPDSYLGELSVWEKAETSLSQVLTEFCGDKWTINHGDGAFYGPKI 505
Query: 431 DISVSDALKRKFQCATLQLDFQLPDRFNLGYSA------------------EDEAKTERP 472
DI + DA + QCAT+QLDFQLP RFNL YS + RP
Sbjct: 506 DIHLKDANGKNHQCATIQLDFQLPIRFNLEYSGGLNNNNNNNNNNEEINDNNNNNSLNRP 565
Query: 473 VMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSEKSQPYALQVRDHIYRAGY 532
VMIHRA+ GSVERM AIL+EH GKWPFWLSPRQ IV PVS K +A +++ I AGY
Sbjct: 566 VMIHRALFGSVERMMAILMEHTAGKWPFWLSPRQCIVIPVSNKFNQFAQEIQSKINLAGY 625
Query: 533 YVDVDTTDRKIQKKPNSFVHARSTYIEVVFSCWEELVAGINIYPIRVSVREAQLAQYNFI 592
VDVD D K+ K +REA ++QYN+I
Sbjct: 626 DVDVDLNDSKLLSK---------------------------------KIREATVSQYNYI 652
Query: 593 LVVGEEEAKSGQVSVRVRD---QGDHSNMSIEDLLKHFKEKLEAFQ 635
+VVG+EE + ++VR RD +S+ DL FK +E F+
Sbjct: 653 IVVGQEEIDTNILNVRKRDLPEDNKQVKLSLNDLFSEFKLNIEQFK 698
>sp|P87144|SYTC_SCHPO Threonine--tRNA ligase, cytoplasmic OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ths1 PE=3 SV=1
Length = 703
Score = 327 bits (837), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 167/311 (53%), Positives = 202/311 (64%), Gaps = 45/311 (14%)
Query: 312 AFAELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDY 371
++ +LP R+ADFGVLHRNE SGAL+GLTRVRRFQQDDAHIFC Q++ E+ G +F+
Sbjct: 394 SYRDLPWRVADFGVLHRNEFSGALSGLTRVRRFQQDDAHIFCTPDQVRSEIEGCFDFLKE 453
Query: 372 AYRIFGFTYELKLSTRPE-KYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKI 430
Y FGFT+ L+LSTRPE KYLGDLATW+KAEA L AL+ G W++N GDGAFYGPKI
Sbjct: 454 VYGTFGFTFHLELSTRPEEKYLGDLATWDKAEAQLKAALDASGYKWELNAGDGAFYGPKI 513
Query: 431 DISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEA----------KTERPVMIHRAIL 480
DI+V DALKR+ QCAT+QLDFQLP+RF L + A A K RPVM+HRAIL
Sbjct: 514 DITVFDALKRQHQCATIQLDFQLPERFQLEFHAPASAEEAKESGNNNKYTRPVMVHRAIL 573
Query: 481 GSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSEKSQPYALQVRDHIYRAGYYVDVDTTD 540
GS+ERM AIL EHY GKWPFW+SPRQ + PVS + YA +V + + A +VD D +D
Sbjct: 574 GSLERMIAILTEHYAGKWPFWMSPRQVCIIPVSAAAYNYADKVHNILSEADIFVDTDKSD 633
Query: 541 RKIQKKPNSFVHARSTYIEVVFSCWEELVAGINIYPIRVSVREAQLAQYNFILVVGEEEA 600
+ KK +R AQLAQYNFI VVG EE
Sbjct: 634 NTLPKK----------------------------------IRNAQLAQYNFIFVVGAEEE 659
Query: 601 KSGQVSVRVRD 611
+ V+VR RD
Sbjct: 660 STNSVNVRNRD 670
Score = 251 bits (641), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 129/261 (49%), Positives = 170/261 (65%), Gaps = 8/261 (3%)
Query: 55 IKVIPKRISLFQSLQSEQQARLQSLPHDPIKITLPDGSVKEGKRWETSPMDIAQGISKSL 114
I I R+ LF LQ E + L + P + I ITLPDG V +G WET+P+ IA ISK L
Sbjct: 20 IPFIQHRLDLFDKLQKEYKESLATKPREEIDITLPDGKVIKGTSWETTPISIAASISKGL 79
Query: 115 AANALISMVNGVLWDMTRPLEADCDLKLFTFDSDEGRDTFWHSSAHILGQAIEQQYGCKL 174
A +++VNG WD+TRPLEA C LKL F+ EG+ FWHSSAHILG+A E + C L
Sbjct: 80 ADRVTVAIVNGEPWDLTRPLEASCTLKLCDFNDPEGKRVFWHSSAHILGEATELSFHCHL 139
Query: 175 CIGPCTTRGEGFYYDAFYGDLG--LNPDHFKSIDSEADKA--AKQPFERIEVTRDQALEM 230
CIGP T EGF+Y+ D G + D + SI+S A +A KQPFER+ ++++ LEM
Sbjct: 140 CIGPPTD--EGFFYEMGI-DNGRVITNDDYSSIESYAKQAIKQKQPFERLVISKEGLLEM 196
Query: 231 FSDNNFKVEII-NDLPADKTITVYRCGPLVDLCRGPHIPNTSFVKGFGCLKASSAYWRGN 289
F N +K II +P + TVYRCGPL+DLC GPH+P+T +K F K SS+Y+ G+
Sbjct: 197 FRYNKYKQYIIQTKIPDGASTTVYRCGPLIDLCTGPHVPHTGRIKSFAVTKNSSSYFLGD 256
Query: 290 KDRESLQRVYGISYPDKKRLK 310
+SLQRVYGIS+PD K+++
Sbjct: 257 AKNDSLQRVYGISFPDNKQMQ 277
>sp|A6QNM8|SYTC2_BOVIN Probable threonine--tRNA ligase 2, cytoplasmic OS=Bos taurus
GN=TARSL2 PE=2 SV=1
Length = 724
Score = 290 bits (741), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 132/211 (62%), Positives = 165/211 (78%)
Query: 312 AFAELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDY 371
++ E+P+RLADFGVLHRNE SGAL+GLT VRRFQQDDAHIFC Q+++E++G L+F+
Sbjct: 503 SWREMPIRLADFGVLHRNEPSGALSGLTCVRRFQQDDAHIFCTVGQLEEEIKGCLQFLQS 562
Query: 372 AYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKID 431
Y FGF+++L LSTRPE +LG + W++AE L +L EFGKPW+IN G+GAFYGPKID
Sbjct: 563 VYSTFGFSFQLNLSTRPENFLGKIELWDEAEKQLQNSLMEFGKPWKINPGEGAFYGPKID 622
Query: 432 ISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILL 491
+ + DAL R QCAT+QLDFQLP RFNL Y ++D + PV+IH+AILGSVERM AIL
Sbjct: 623 LEIKDALGRYHQCATIQLDFQLPIRFNLTYVSKDGDDKKNPVIIHQAILGSVERMIAILS 682
Query: 492 EHYKGKWPFWLSPRQAIVCPVSEKSQPYALQ 522
E+Y GKWPFWLSPRQ +V PV + YALQ
Sbjct: 683 ENYGGKWPFWLSPRQVMVIPVGPTCEKYALQ 713
Score = 211 bits (536), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 111/279 (39%), Positives = 168/279 (60%), Gaps = 15/279 (5%)
Query: 46 NPVKDEEYLIKVIPKRISLFQSLQSEQQARL-----QSLPHDPIKITLPDGSVKEGKRWE 100
N VK+ +K +R+ F+ L+ + Q L + + I + + DG +G+ W+
Sbjct: 120 NEVKNPPNFMK---ERLKFFEILKKDHQLLLAIYEKKGDSSNVITVRVADGRTVKGEAWK 176
Query: 101 TSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLFTFDSDEGRDTFWHSSAH 160
T+P +A IS+ LA +++ VNG LWD+ RPLE D ++L TF+ +E R +WHSSAH
Sbjct: 177 TTPYQVAAEISQELAETTVVAKVNGELWDLDRPLEGDATVELLTFEDEEARAVYWHSSAH 236
Query: 161 ILGQAIEQQYGCKLCIGPCTTRGEG-FYYDAFYGDLGLNPDHFKSIDS--EADKAAKQPF 217
+LG+A+E YG LC C+ G+G F+YD + D ++ ++S +A +QPF
Sbjct: 237 VLGEALELHYGGLLC---CSPPGDGSFHYDVYLEDRAVSSAELPVLESMCQAIIKEQQPF 293
Query: 218 ERIEVTRDQALEMFSDNNFKVEIINDLPADKTITVYRCGPLVDLCRGPHIPNTSFVKGFG 277
ER+EV+ L++F N FK I+ + A T TVYRCGPLV+LC+GPH+ +T +K
Sbjct: 294 ERLEVSTKVLLDLFKYNKFKCRILKEKVATPTTTVYRCGPLVELCKGPHVRHTGTIKVIK 353
Query: 278 CLKASSAYWRGNKDRESLQRVYGISYPDKKRLKHAFAEL 316
K S AYW N + E LQRVYG+S+PD++R+ A+ EL
Sbjct: 354 IFKNSLAYWADNPEMEMLQRVYGVSFPDEQRMA-AWEEL 391
>sp|Q8SRH2|SYTC_ENCCU Probable threonine--tRNA ligase, cytoplasmic OS=Encephalitozoon
cuniculi (strain GB-M1) GN=ECU07_1570 PE=3 SV=1
Length = 640
Score = 287 bits (734), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 144/298 (48%), Positives = 195/298 (65%), Gaps = 39/298 (13%)
Query: 311 HAFAELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFID 370
H+F +LPLRLADFGVLHRNE SG LTGLTRVRRFQQDDAHIFC + Q+K+E++G LEF+
Sbjct: 342 HSFRDLPLRLADFGVLHRNELSGTLTGLTRVRRFQQDDAHIFCTKDQVKEEIKGCLEFLS 401
Query: 371 YAYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKI 430
+ Y +FGF +EL LSTRPEKYLG + W++AE AL +A++E P++IN GDGAFYGPKI
Sbjct: 402 FVYGVFGFRFELVLSTRPEKYLGSVDEWDRAEKALADAMDESNMPFKINAGDGAFYGPKI 461
Query: 431 DISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAIL 490
DI++ DAL R+ QCAT+QLDFQLP RF L Y D + PV+IHRAILGS+ERM AI+
Sbjct: 462 DITLHDALGRRIQCATIQLDFQLPQRFELKYRDSD-GQCRTPVIIHRAILGSIERMIAII 520
Query: 491 LEHYKGKWPFWLSPRQAIVCPVSEKSQPYALQVRDHIYRAGYYVDVDTTDRKIQKKPNSF 550
LE + + PFW+SPRQ + V+ + Y +VR + R + +DV + K+
Sbjct: 521 LESFGKRLPFWISPRQIAI--VNMGNPDYVGKVRSVLAR--FRLDVIDDGNTLSKR---- 572
Query: 551 VHARSTYIEVVFSCWEELVAGINIYPIRVSVREAQLAQYNFILVVGEEEAKSGQVSVR 608
+R A+ + Y + VVG++EA++ ++++R
Sbjct: 573 ------------------------------IRTAETSGYALVCVVGKKEAEANEINIR 600
Score = 133 bits (334), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 80/209 (38%), Positives = 116/209 (55%), Gaps = 8/209 (3%)
Query: 101 TSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLFTFDSDEGRDTFWHSSAH 160
T+P DI K + + ++GV DM+ + DC L+L TF+ D RD FWHSSAH
Sbjct: 21 TTPYDILCDYFKD-RKDVISCRIDGVYSDMSSEILKDCKLELMTFEDDGARDIFWHSSAH 79
Query: 161 ILGQAIEQQY-GCKLCIGPCTTRGEGFYYDAFYGDLGLNPDHFKSIDSEADKAAKQP--F 217
+LG A+ Y KL GP EGF+YD D ++ + ++ I+ E K K+ F
Sbjct: 80 VLGNALVNLYPDAKLVHGPPIE--EGFFYDVDVTD-PISSEDYEKIEEEMVKIMKKNYRF 136
Query: 218 ERIEVTRDQALEMFSDNNFKVEIINDLPADKTITVYRCGPLVDLCRGPHIPNTSFVKGFG 277
ER+ ++++ LE + DN K I DK +VYR G D+C GPHI +T +K
Sbjct: 137 ERVIKSKEELLEAYRDNPCKTHFIMK-GVDKESSVYRNGDFFDMCLGPHIRSTGVIKAVK 195
Query: 278 CLKASSAYWRGNKDRESLQRVYGISYPDK 306
LK SSAY+ + + +SLQR+Y I++P K
Sbjct: 196 VLKNSSAYFLNDPNLKSLQRIYAITFPSK 224
>sp|Q6M9L0|SYT_PARUW Threonine--tRNA ligase OS=Protochlamydia amoebophila (strain UWE25)
GN=thrS PE=3 SV=1
Length = 650
Score = 285 bits (729), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 144/320 (45%), Positives = 195/320 (60%), Gaps = 36/320 (11%)
Query: 307 KRLKHAFAELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVL 366
K H++ ELPLR+A+ G +HR E SG+L+GL RVR F QDDAHIF + S I+ E+ GVL
Sbjct: 345 KSHTHSYRELPLRIAEIGNVHRYEPSGSLSGLFRVRSFHQDDAHIFMKPSDIQQEILGVL 404
Query: 367 EFIDYAYRIFGFTYELKLSTRPEK-YLGDLATWEKAEAALTEALNEFGKPWQINEGDGAF 425
D Y FG +Y L+LSTRPEK +G WE A A L AL+E GK ++INEGDGAF
Sbjct: 405 ALADEIYSTFGLSYRLELSTRPEKNTIGTDHEWEVATAGLKGALDEMGKEYRINEGDGAF 464
Query: 426 YGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVER 485
YGPKID + DA+ R +QC T+QLD LP++F L Y+ D + +RPVMIHRAI GS+ER
Sbjct: 465 YGPKIDFHIRDAINRSWQCGTIQLDMALPEKFELEYTFSDGTR-QRPVMIHRAIFGSIER 523
Query: 486 MFAILLEHYKGKWPFWLSPRQAIVCPVSEKSQPYALQVRDHIYRAGYYVDVDTTDRKIQK 545
F IL+EHY GK+P WLSP Q V+++ +PYA ++ AG++VDVD+T + K
Sbjct: 524 FFGILIEHYVGKFPLWLSPSQIRFITVADRHEPYARELAKRFKNAGFHVDVDSTQESVSK 583
Query: 546 KPNSFVHARSTYIEVVFSCWEELVAGINIYPIRVSVREAQLAQYNFILVVGEEEAKSGQV 605
K VR AQLAQ+N+IL +G++E +
Sbjct: 584 K----------------------------------VRNAQLAQFNYILTIGDQEVEHKTA 609
Query: 606 SVRVRDQGDHSNMSIEDLLK 625
++R RD H + I++ ++
Sbjct: 610 NLRTRDNVVHGEIQIDEFIQ 629
Score = 145 bits (366), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 83/235 (35%), Positives = 129/235 (54%), Gaps = 9/235 (3%)
Query: 86 ITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLFTF 145
I L D S E T+ D+A ++ AL + +NG D++ PL+ + L+ F
Sbjct: 10 IKLKDQSSYEMPSGSTAK-DLADKLNLKGPHEALGASINGKTVDLSYPLQEGDQVILWGF 68
Query: 146 DSDEGRDTFWHSSAHILGQAIEQQY-GCKLCIGPCTTRGEGFYYDAFYGDLGLNPDHFKS 204
+ EG++ FWH+SAH+L QAI + + + IGP G FYYD + +L ++ F+
Sbjct: 69 NDPEGKEIFWHTSAHVLAQAILRLWPDAQPTIGPPIENG--FYYD--FANLTISDADFEK 124
Query: 205 IDSEADKAAKQPFE---RIEVTRDQALEMFSDNNFKVEIINDLPADKTITVYRCGPLVDL 261
I+ E + F+ + T+ AL+ F +N +K E+IN + T+T YR G DL
Sbjct: 125 IEKEMQAIISENFQIKREVISTKSDALKQFQNNPYKCELINSFEDESTLTGYRQGEFYDL 184
Query: 262 CRGPHIPNTSFVKGFGCLKASSAYWRGNKDRESLQRVYGISYPDKKRLKHAFAEL 316
CRGPH+ N +K +K + AYWRG+ ++E L R+Y IS+PD+K LK +L
Sbjct: 185 CRGPHLFNLGKIKALKLMKTAGAYWRGDSNKEMLTRIYAISFPDRKLLKDYLHQL 239
>sp|Q68FW7|SYTM_RAT Threonine--tRNA ligase, mitochondrial OS=Rattus norvegicus GN=Tars2
PE=2 SV=1
Length = 723
Score = 283 bits (725), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 146/300 (48%), Positives = 185/300 (61%), Gaps = 34/300 (11%)
Query: 312 AFAELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDY 371
++ ELP+RLADFGVLHR EASG+L GLTR+ RFQQDDAHIFC SQ++ E+RG L+F+
Sbjct: 427 SWRELPVRLADFGVLHRAEASGSLGGLTRLWRFQQDDAHIFCAPSQLEAEIRGCLDFLRS 486
Query: 372 AYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKID 431
Y + GF++ L LSTRP +LG+ W++AE L +AL EFG+PW +N GDGAFYGPKID
Sbjct: 487 VYSVLGFSFHLALSTRPPGFLGEPHLWDQAEKVLQQALEEFGEPWNLNPGDGAFYGPKID 546
Query: 432 ISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILL 491
+ + DAL R QC T+QLDFQLP RF+L Y A E PV+IHRA+LGSVER+ +L
Sbjct: 547 VHLHDALGRPHQCGTIQLDFQLPLRFDLQYKGPAGAP-ECPVLIHRAVLGSVERLLGVLA 605
Query: 492 EHYKGKWPFWLSPRQAIVCPVSEKSQPYALQVRDHIYRAGYYVDVDTTDRKIQKKPNSFV 551
E G+WP WLSP Q +V PV + + YA QV+ + AG D+D
Sbjct: 606 ESCGGRWPLWLSPFQVVVIPVRTEQEDYARQVQQCLQAAGLVSDLDAD------------ 653
Query: 552 HARSTYIEVVFSCWEELVAGINIYPIRVSVREAQLAQYNFILVVGEEEAKSGQVSVRVRD 611
G+ + VR AQLA YNF VVG+ E V+VR RD
Sbjct: 654 ------------------CGLT---LSRRVRRAQLAHYNFQFVVGQREQSQMSVNVRTRD 692
Score = 205 bits (522), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 109/260 (41%), Positives = 152/260 (58%), Gaps = 8/260 (3%)
Query: 58 IPKRISLFQSLQSEQQARLQSLPHD---PIKITLPDGSVKEGKRWETSPMDIAQGISKSL 114
+ +R LF+ L + Q RL S+ IKI+LP+G + W T+P +AQ IS +L
Sbjct: 37 LAERFGLFEELWTAQVKRLASMTQKKARTIKISLPEGQKVDAVAWNTTPYQLAQQISSTL 96
Query: 115 AANALISMVNGVLWDMTRPLEADCDLKLFTFDSDEGRDTFWHSSAHILGQAIEQQYGCKL 174
A A+ + VNG L+D+ RPLE DC L+ TFDS EG+ FW SSAH+LG A EQ G L
Sbjct: 97 ADTAVAAEVNGELYDLDRPLETDCHLRFLTFDSPEGKAVFWRSSAHVLGAAAEQHLGAVL 156
Query: 175 CIGPCTTRGEGFYYDAFYG-DLGLNPDHFKSIDSEADK--AAKQPFERIEVTRDQALEMF 231
C GP T GFY D F G + + +++ + A QPF R+E +R Q ++F
Sbjct: 157 CRGPSTE--SGFYLDFFLGKERTVRSTELPTLERICQEIITAAQPFRRLEASRGQLRQLF 214
Query: 232 SDNNFKVEIINDLPADKTITVYRCGPLVDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKD 291
DN+FK+ +I + T TVY CG VDLC+GPH+ +T + L SSA WR ++
Sbjct: 215 KDNHFKLHVIEEKVTGTTATVYGCGMSVDLCQGPHLRHTGQIGALKLLTNSSALWRSSEA 274
Query: 292 RESLQRVYGISYPDKKRLKH 311
E+LQRV GIS+P + L++
Sbjct: 275 PETLQRVSGISFPKAELLRN 294
>sp|Q9BW92|SYTM_HUMAN Threonine--tRNA ligase, mitochondrial OS=Homo sapiens GN=TARS2 PE=1
SV=1
Length = 718
Score = 282 bits (721), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 142/300 (47%), Positives = 184/300 (61%), Gaps = 34/300 (11%)
Query: 312 AFAELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDY 371
++ ELPLRLADFG LHR EASG L GLTR+R FQQDDAHIFC Q++ E++ L+F+
Sbjct: 422 SWRELPLRLADFGALHRAEASGGLGGLTRLRCFQQDDAHIFCTTDQLEAEIQSCLDFLRS 481
Query: 372 AYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKID 431
Y + GF++ L LSTRP +LGD W++AE L +AL EFG+PW +N GDGAFYGPKID
Sbjct: 482 VYAVLGFSFRLALSTRPSGFLGDPCLWDQAEQVLKQALKEFGEPWDLNSGDGAFYGPKID 541
Query: 432 ISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILL 491
+ + DAL R QC T+QLDFQLP RF+L Y + A ERPV+IHRA+LGSVER+ +L
Sbjct: 542 VHLHDALGRPHQCGTIQLDFQLPLRFDLQYKGQAGA-LERPVLIHRAVLGSVERLLGVLA 600
Query: 492 EHYKGKWPFWLSPRQAIVCPVSEKSQPYALQVRDHIYRAGYYVDVDTTDRKIQKKPNSFV 551
E GKWP WLSP Q +V PV + + YA + + + AG D+D
Sbjct: 601 ESCGGKWPLWLSPFQVVVIPVGSEQEEYAKEAQQSLRAAGLVSDLDAD------------ 648
Query: 552 HARSTYIEVVFSCWEELVAGINIYPIRVSVREAQLAQYNFILVVGEEEAKSGQVSVRVRD 611
+G+ + +R AQLA YNF VVG++E V++R RD
Sbjct: 649 ------------------SGLT---LSRRIRRAQLAHYNFQFVVGQKEQSKRTVNIRTRD 687
Score = 189 bits (480), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 112/260 (43%), Positives = 151/260 (58%), Gaps = 10/260 (3%)
Query: 58 IPKRISLFQSLQSEQQARLQSLPHD---PIKITLPDGSVKEGKRWETSPMDIAQGISKSL 114
+ +R+ LF+ L + Q RL S+ IKI+LP G + W T+P +A+ IS +L
Sbjct: 32 LAERLGLFEELWAAQVKRLASMAQKEPRTIKISLPGGQKIDAVAWNTTPYQLARQISSTL 91
Query: 115 AANALISMVNGVLWDMTRPLEADCDLKLFTFDSDEGRDTFWHSSAHILGQAIEQQYGCKL 174
A A+ + VNG +D+ RPLE D DL+ TFDS EG+ FWHSS H+LG A EQ G L
Sbjct: 92 ADTAVAAQVNGEPYDLERPLETDSDLRFLTFDSPEGKAVFWHSSTHVLGAAAEQFLGAVL 151
Query: 175 CIGPCTTRGEGFYYDAFYGD----LGLNPDHFKSIDSEADKAAKQPFERIEVTRDQALEM 230
C GP T GFY+D F G G + I E AA+ PF R+E +RDQ ++
Sbjct: 152 CRGPSTEY--GFYHDFFLGKERTIRGSELPVLERICQELTAAAR-PFRRLEASRDQLRQL 208
Query: 231 FSDNNFKVEIINDLPADKTITVYRCGPLVDLCRGPHIPNTSFVKGFGCLKASSAYWRGNK 290
F DN FK+ +I + T TVY CG LVDLC+GPH+ +T + G L SS+ WR +
Sbjct: 209 FKDNPFKLHLIEEKVTGPTATVYGCGTLVDLCQGPHLRHTGQIGGLKLLSNSSSLWRSSG 268
Query: 291 DRESLQRVYGISYPDKKRLK 310
E+LQRV GIS+P + L+
Sbjct: 269 APETLQRVSGISFPTTELLR 288
>sp|Q189B8|SYT_CLOD6 Threonine--tRNA ligase OS=Clostridium difficile (strain 630)
GN=thrS PE=3 SV=1
Length = 639
Score = 280 bits (715), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 141/323 (43%), Positives = 192/323 (59%), Gaps = 35/323 (10%)
Query: 311 HAFAELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFID 370
H++ + P+R+A+ G +HR+E SGAL GL RVR F QDD+HIF QIKDE++GV ID
Sbjct: 345 HSYRDFPMRVAELGRVHRHELSGALQGLMRVRAFTQDDSHIFMLPEQIKDEIKGVANLID 404
Query: 371 YAYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKI 430
Y+ FGF Y L+LSTRPE +G WE AE L EAL E G P+ INEGDGAFYGPKI
Sbjct: 405 GIYKTFGFEYNLELSTRPENSMGSDEEWEAAENGLREALEELGLPYTINEGDGAFYGPKI 464
Query: 431 DISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAIL 490
D + D L R +QC T+QLD QLP +F+ Y +D K RPVMIHR GS+ER IL
Sbjct: 465 DFHLKDCLGRTWQCGTIQLDMQLPRQFDNTYIGQDGEK-HRPVMIHRVAFGSIERFIGIL 523
Query: 491 LEHYKGKWPFWLSPRQAIVCPVSEKSQPYALQVRDHIYRAGYYVDVDTTDRKIQKKPNSF 550
+EHY GK+P WLSP Q + P+S+K YA +V+ ++ G V++D KI K
Sbjct: 524 IEHYAGKFPVWLSPTQVKILPISDKFMDYANEVKKELFDKGIRVELDDRAEKIGFK---- 579
Query: 551 VHARSTYIEVVFSCWEELVAGINIYPIRVSVREAQLAQYNFILVVGEEEAKSGQVSVRVR 610
+REAQL + ++L+VGE+E VSVR R
Sbjct: 580 ------------------------------IREAQLEKVPYMLIVGEKEVADNNVSVRSR 609
Query: 611 DQGDHSNMSIEDLLKHFKEKLEA 633
D+G+ ++ +++ + +++E+
Sbjct: 610 DKGEIGSIKLDEFIASISKEIES 632
Score = 181 bits (459), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 98/229 (42%), Positives = 142/229 (62%), Gaps = 9/229 (3%)
Query: 84 IKITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLF 143
IK+ L DGS+KE + S MD+A+ IS+ LA N + + VNG + + ++ DCDL LF
Sbjct: 2 IKVALKDGSIKEFEN-AISVMDVAKSISEGLARNVVAASVNGEVVGLDHIIDTDCDLNLF 60
Query: 144 TFDSDEGRDTFWHSSAHILGQAIEQQY-GCKLCIGPCTTRGEGFYYDAFYGDLGLNPDHF 202
F+ EG++ F H+SAHIL QAI++ Y KL IGP G FYYD D L P+
Sbjct: 61 KFEDKEGKEVFRHTSAHILAQAIKRLYPEAKLAIGPSIENG--FYYDIDL-DHRLVPEDL 117
Query: 203 KSIDSEADKAAKQPF--ERIEVTRDQALEMFSDN--NFKVEIINDLPADKTITVYRCGPL 258
+ I++E K AK+ ER E+ R++ALE+ + ++KVE+I+DLP + I+ Y+ G
Sbjct: 118 EKIEAEMKKIAKEDLKIERFELPRNEALELMKEQGEDYKVELISDLPESEIISFYKQGDF 177
Query: 259 VDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKDRESLQRVYGISYPDKK 307
DLCRGPH+P+T VK + AYWRG+++ + LQR+YG S+ K
Sbjct: 178 TDLCRGPHLPSTKKVKAVKLQSVAGAYWRGDENNKMLQRIYGTSFEKNK 226
>sp|Q0AY05|SYT_SYNWW Threonine--tRNA ligase OS=Syntrophomonas wolfei subsp. wolfei
(strain Goettingen) GN=thrS PE=3 SV=1
Length = 635
Score = 278 bits (711), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 143/325 (44%), Positives = 197/325 (60%), Gaps = 39/325 (12%)
Query: 311 HAFAELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFID 370
H++ ELPLR+ + G++HR+E SG L GL RVR F QDDAHIF QI DE++GV++ +D
Sbjct: 345 HSYKELPLRMGEMGLVHRHEMSGVLHGLMRVRAFTQDDAHIFMLPEQIIDEIKGVMDLVD 404
Query: 371 YAYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKI 430
Y +FGF Y ++LST+PEK +G WE A AL +AL E G +++NEGDGAFYGPKI
Sbjct: 405 RFYSLFGFPYHVELSTKPEKAMGSDEIWEVATNALIKALEERGMEYKVNEGDGAFYGPKI 464
Query: 431 DISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAIL 490
D + D+L R +QC T+QLDFQ+P++F+L Y ED K RPVMIHR I GS+ER IL
Sbjct: 465 DFHLQDSLDRTWQCGTIQLDFQMPEKFDLTYVGEDGGK-HRPVMIHRVIYGSIERFIGIL 523
Query: 491 LEHYKGKWPFWLSPRQAIVCPVSEKSQPYALQVRDHIYRAGYYVDVDTTDRKIQKKPNSF 550
EH+ G +P WL+P Q V P++++SQ YA QV + +AG V+ D KI K
Sbjct: 524 TEHFGGAFPLWLAPVQVRVLPITQRSQDYARQVVAELEQAGIRVEADFRSEKIGYK---- 579
Query: 551 VHARSTYIEVVFSCWEELVAGINIYPIRVSVREAQLAQYNFILVVGEEEAKSGQVSVRVR 610
+RE QL + ++LV+G+ EA+ G VSVR R
Sbjct: 580 ------------------------------IREGQLQKIPYLLVLGDREAEEGTVSVRHR 609
Query: 611 DQGDHSNMSIED----LLKHFKEKL 631
+GD +E+ ++K K+K+
Sbjct: 610 KEGDLGAKLLEEFKQTIVKEIKDKV 634
Score = 159 bits (403), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 88/231 (38%), Positives = 135/231 (58%), Gaps = 9/231 (3%)
Query: 84 IKITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLF 143
I I L DGS +E S + +A+ IS LA NA+ ++ NG + D+ ++ D L+L
Sbjct: 2 ISIRLKDGSQREYPEG-ISLLQVAEDISPKLAKNAMAAVFNGKISDLNSQVKEDGCLELL 60
Query: 144 TFDSDEGRDTFWHSSAHILGQAIEQQY-GCKLCIGPCTTRGEGFYYDAFYGDLGLNPDHF 202
F+ + R+ + HSSAH++ QA+++ + KL IGP +G FYYD F P+ F
Sbjct: 61 DFEDERAREVYRHSSAHVMAQAVKRLWPESKLAIGPAIDKG--FYYD-FDSGHTFTPEDF 117
Query: 203 KSIDSEADKAAKQ--PFERIEVTRDQALEMFSD--NNFKVEIINDLPADKTITVYRCGPL 258
+I+ E + K P R E++R++AL+ FS+ ++K+E+I DLP D I+ Y+ G
Sbjct: 118 AAIEEEMKRIIKADYPIVRKELSREEALQFFSERSEDYKLELIEDLPEDAVISTYQQGEF 177
Query: 259 VDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKDRESLQRVYGISYPDKKRL 309
VDLC GPH+P+T +K + + AYWRG++ LQRVY S+P K L
Sbjct: 178 VDLCAGPHLPSTGRLKAIKVMSLAGAYWRGSERNPMLQRVYATSFPKKSML 228
>sp|Q3UQ84|SYTM_MOUSE Threonine--tRNA ligase, mitochondrial OS=Mus musculus GN=Tars2 PE=2
SV=1
Length = 723
Score = 277 bits (708), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 142/300 (47%), Positives = 183/300 (61%), Gaps = 34/300 (11%)
Query: 312 AFAELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDY 371
++ ELP+RLADFG LHR EASG+L GLTR+ RFQQDDAHIFC Q++ E++G L+F+
Sbjct: 427 SWRELPVRLADFGALHRAEASGSLGGLTRLWRFQQDDAHIFCAPHQLEAEIQGCLDFLRC 486
Query: 372 AYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKID 431
Y + GF++ L LSTRP +LG+ W++AE L +AL +FG+PW +N GDGAFYGPKID
Sbjct: 487 VYSVLGFSFHLALSTRPPGFLGEPRLWDQAEQVLQQALEKFGEPWDLNPGDGAFYGPKID 546
Query: 432 ISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILL 491
+ + DAL R QC T+QLDFQLP RF+L Y E PV+IHRA+LGSVER+ +L
Sbjct: 547 VHLHDALGRPHQCGTIQLDFQLPLRFDLQYKG-PAGTPECPVLIHRAVLGSVERLLGVLA 605
Query: 492 EHYKGKWPFWLSPRQAIVCPVSEKSQPYALQVRDHIYRAGYYVDVDTTDRKIQKKPNSFV 551
E GKWP WLSP Q +V PV + + YA QV+ + AG D+D
Sbjct: 606 ESCGGKWPLWLSPLQVVVIPVRTEQEEYARQVQQCLQAAGLVSDLDAD------------ 653
Query: 552 HARSTYIEVVFSCWEELVAGINIYPIRVSVREAQLAQYNFILVVGEEEAKSGQVSVRVRD 611
+G+ + VR AQLA YNF VVG+ E V+VR RD
Sbjct: 654 ------------------SGLT---LSRRVRRAQLAHYNFQFVVGQREQSQRTVNVRTRD 692
Score = 207 bits (526), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 111/260 (42%), Positives = 152/260 (58%), Gaps = 8/260 (3%)
Query: 58 IPKRISLFQSLQSEQQARLQSLPHD---PIKITLPDGSVKEGKRWETSPMDIAQGISKSL 114
+ +R LF+ L + +L S+ IKI+LP+G + W T+P +A IS +L
Sbjct: 37 LAERFGLFEELWTAHVKKLASMTQKKARAIKISLPEGQKVDAVAWNTTPYQLAHQISVTL 96
Query: 115 AANALISMVNGVLWDMTRPLEADCDLKLFTFDSDEGRDTFWHSSAHILGQAIEQQYGCKL 174
A A+ + VNG L+D+ RPLE DC L+ TFDS EG+ FWHSSAH+LG A EQQ G L
Sbjct: 97 ADTAVAAEVNGELYDLDRPLETDCHLRFLTFDSPEGKAVFWHSSAHVLGAAAEQQLGAVL 156
Query: 175 CIGPCTTRGEGFYYDAFYG-DLGLNPDHFKSIDSEADK--AAKQPFERIEVTRDQALEMF 231
C GP T GFY+D F G + + ++ + AA QPF R+E +RDQ ++F
Sbjct: 157 CRGPSTE--SGFYHDFFLGKERTVRSAELPILERICQELIAAAQPFRRLEASRDQLRQLF 214
Query: 232 SDNNFKVEIINDLPADKTITVYRCGPLVDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKD 291
DN+FK+ +I + T TVY CG VDLCRGPH+ +T + L SSA WR
Sbjct: 215 KDNHFKLHLIEEKVTGPTATVYGCGMSVDLCRGPHLRHTGQIGALKLLTNSSALWRSLGA 274
Query: 292 RESLQRVYGISYPDKKRLKH 311
E+LQRV GIS+P + L++
Sbjct: 275 PETLQRVSGISFPKVELLRN 294
>sp|A1ARE5|SYT_PELPD Threonine--tRNA ligase OS=Pelobacter propionicus (strain DSM 2379)
GN=thrS PE=3 SV=1
Length = 636
Score = 275 bits (704), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 141/324 (43%), Positives = 196/324 (60%), Gaps = 35/324 (10%)
Query: 312 AFAELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDY 371
++ +LPLR + G +HR+E +G L GL RVR F QDDAHI C Q+ E++GVL+F+
Sbjct: 348 SYRDLPLRYFELGTVHRHERAGVLHGLLRVRGFTQDDAHILCAPEQLDGEIKGVLKFVSD 407
Query: 372 AYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKID 431
IFGF YE++LSTRPEK +GD A WE A AL AL + G+ ++INEGDGAFYGPKID
Sbjct: 408 VMAIFGFEYEMELSTRPEKSIGDDAAWELATEALLSALKDTGRSFEINEGDGAFYGPKID 467
Query: 432 ISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILL 491
I + DAL R++QCAT+Q DF LP+RF+L Y A D K +RPVM+HR +LG++ER +L+
Sbjct: 468 IKLKDALDRRWQCATIQCDFTLPERFDLQYVAADGEK-KRPVMVHRVVLGAIERFIGVLI 526
Query: 492 EHYKGKWPFWLSPRQAIVCPVSEKSQPYALQVRDHIYRAGYYVDVDTTDRKIQKKPNSFV 551
EHY G +P WLSP QA++ V++ PYA V +H+ AG V D + K+ K
Sbjct: 527 EHYAGNFPLWLSPVQAMLVTVTDNHIPYAQGVLEHLREAGIRVQGDFRNEKLSFK----- 581
Query: 552 HARSTYIEVVFSCWEELVAGINIYPIRVSVREAQLAQYNFILVVGEEEAKSGQVSVRVRD 611
+REAQL + ++LV+G++E +S V+ R RD
Sbjct: 582 -----------------------------IREAQLQKVPYMLVIGDKEMESATVTPRFRD 612
Query: 612 QGDHSNMSIEDLLKHFKEKLEAFQ 635
+ M ED + E+ + F+
Sbjct: 613 GKNLVAMKPEDFVAFVVEETKNFR 636
Score = 155 bits (392), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 90/232 (38%), Positives = 134/232 (57%), Gaps = 10/232 (4%)
Query: 84 IKITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLF 143
I I LPDGS +E T D+A I LA A+ ++G L D++ L+ D +++
Sbjct: 4 ISIALPDGSKREIASGSTIA-DLAASIGAGLAKAAIAGKLDGELVDLSTELKDDSRVEII 62
Query: 144 TFDSDEGRDTFWHSSAHILGQAIEQQY-GCKLCIGPCTTRGEGFYYDAFYGDLGLNPDHF 202
T S E HS+AH++ QA+++ + K+ IGP GFYYD F D P+
Sbjct: 63 TEKSPEALTVIRHSAAHLMAQAVKELFPQAKVTIGPAIE--SGFYYD-FDMDAPFTPEDL 119
Query: 203 KSIDSEADK--AAKQPFERIEVTRDQALEMFSD--NNFKVEIINDLPADKTITVYRCGPL 258
+ I++ + AA Q ER ++ +A+ +FS N+KVE+INDL A+ T++VY G
Sbjct: 120 ERIEARMAELAAANQKIERRVLSSSEAVSLFSGMGENYKVELINDLAAE-TVSVYSQGDF 178
Query: 259 VDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKDRESLQRVYGISYPDKKRLK 310
DLCRGPH+P+TS +K F L + AYWRG++ LQR+YG ++ DKK L+
Sbjct: 179 ADLCRGPHLPSTSRIKAFKLLSIAGAYWRGDEKNRMLQRIYGTAFADKKELE 230
>sp|Q74D04|SYT_GEOSL Threonine--tRNA ligase OS=Geobacter sulfurreducens (strain ATCC
51573 / DSM 12127 / PCA) GN=thrS PE=3 SV=1
Length = 636
Score = 275 bits (703), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 139/324 (42%), Positives = 197/324 (60%), Gaps = 35/324 (10%)
Query: 312 AFAELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDY 371
++ +LPLR + G +HR+E +G L GL RVR F QDDAHI C Q+ E++GV+ F++
Sbjct: 348 SYRDLPLRFFELGTVHRHERAGVLHGLLRVRCFTQDDAHILCTPEQLDAEIKGVISFVND 407
Query: 372 AYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKID 431
IFGF YE++LSTRPEK +G WE+A AL AL + G+P++INEGDGAFYGPKID
Sbjct: 408 VMGIFGFDYEMELSTRPEKSIGSDEDWERATGALLGALKDSGRPYEINEGDGAFYGPKID 467
Query: 432 ISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILL 491
I + D+L RK+QCAT+Q DF LP+RF+L Y D + +RPVM+HR ILGS+ER +L+
Sbjct: 468 IKLRDSLDRKWQCATIQCDFTLPERFDLTYVDAD-GERKRPVMVHRVILGSIERFIGVLI 526
Query: 492 EHYKGKWPFWLSPRQAIVCPVSEKSQPYALQVRDHIYRAGYYVDVDTTDRKIQKKPNSFV 551
EH+ G +P WLSP QAIV V++ QPYA QV + + G V D + K+ K
Sbjct: 527 EHFAGNFPLWLSPVQAIVLTVTDNQQPYAAQVFETLRTNGVRVQKDFRNEKLGFK----- 581
Query: 552 HARSTYIEVVFSCWEELVAGINIYPIRVSVREAQLAQYNFILVVGEEEAKSGQVSVRVRD 611
+REAQL + ++LV+G++E +SG V+ R RD
Sbjct: 582 -----------------------------IREAQLQKIPYMLVIGDKEVESGTVTPRFRD 612
Query: 612 QGDHSNMSIEDLLKHFKEKLEAFQ 635
+ + M E+ + ++++ F
Sbjct: 613 GSNLAAMKPEEFVAFVNDEVKRFN 636
Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 91/234 (38%), Positives = 139/234 (59%), Gaps = 16/234 (6%)
Query: 84 IKITLPDGS---VKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDL 140
I++TLPDGS + EG + D+A I LA A+ ++GV D+T PL +
Sbjct: 4 IRVTLPDGSERILAEG----ATVRDLAASIGAGLAKAAIAGKIDGVQVDVTAPLTDGARV 59
Query: 141 KLFTFDSDEGRDTFWHSSAHILGQAIEQQY-GCKLCIGPCTTRGEGFYYDAFYGDLGLNP 199
++ T S +G D HS++H++ QA++Q + K+ IGP GFYYD F + +P
Sbjct: 60 EIITDKSADGLDIIRHSTSHLMAQAVKQLFPTAKVTIGPAVE--TGFYYD-FDVETPFSP 116
Query: 200 DHFKSIDSEADKAAKQ--PFERIEVTRDQALEMFSD--NNFKVEIINDLPADKTITVYRC 255
+ I+ + AK P ER ++RD+A+++F D +KVEII LP ++++++YR
Sbjct: 117 EDLARIEERMRELAKADIPVERQVLSRDEAVKLFRDMGEEYKVEIIEALP-EESVSLYRQ 175
Query: 256 GPLVDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKDRESLQRVYGISYPDKKRL 309
G VDLCRGPH+P+TSF + F + AYWRG++ + LQRVYG ++ DKK L
Sbjct: 176 GDFVDLCRGPHLPSTSFCRAFKLTSLAGAYWRGDEKNKMLQRVYGTAFADKKEL 229
>sp|B0S169|SYT_FINM2 Threonine--tRNA ligase OS=Finegoldia magna (strain ATCC 29328)
GN=thrS PE=3 SV=1
Length = 634
Score = 275 bits (703), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 149/372 (40%), Positives = 210/372 (56%), Gaps = 56/372 (15%)
Query: 274 KGFGCLKA----------SSAYWRGNKDRESLQRVYGISYPDK-----------KRLKHA 312
+G+G +K S +W K+ ++ G Y K K H+
Sbjct: 287 RGYGQIKTPLILNEHLWHQSGHWDHYKENMYFTKIDGEDYAIKPMNCPGSILVYKDELHS 346
Query: 313 FAELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYA 372
+ ELP+++A+ G +HR+E SGAL GL RVR F QDDAH+FC QI++EV ++F DY
Sbjct: 347 YRELPIKVAELGQVHRHELSGALHGLFRVRTFVQDDAHVFCLPEQIEEEVSKTIDFCDYI 406
Query: 373 YRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDI 432
Y FGF YE++LSTRPE +G W+ A ++L AL G P++INEGDGAFYGPKID
Sbjct: 407 YSKFGFKYEVELSTRPEDSMGSDEDWDLAISSLKNALEHKGLPYKINEGDGAFYGPKIDF 466
Query: 433 SVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLE 492
+ DA+ R +QC T+QLDFQ+P+RF++ Y A D +K +RP MIHRAILGS ER IL+E
Sbjct: 467 HLEDAIGRTWQCGTIQLDFQMPERFDMTYIASDGSK-KRPAMIHRAILGSEERFMGILIE 525
Query: 493 HYKGKWPFWLSPRQAIVCPVSEKSQPYALQVRDHIYRAGYYVDVDTTDRKIQKKPNSFVH 552
HY GK+P WLSP Q + P+S+K YA +++ + G V VD KI K
Sbjct: 526 HYAGKFPLWLSPVQVEILPISDKFNDYAYELQQKMKARGLRVKVDDRSEKIGLK------ 579
Query: 553 ARSTYIEVVFSCWEELVAGINIYPIRVSVREAQLAQYNFILVVGEEEAKSGQVSVRVRDQ 612
+RE+QL + N+ L++G+ E + +VSVR RD
Sbjct: 580 ----------------------------IRESQLKKVNYSLIIGQNEIDNNEVSVRKRDI 611
Query: 613 GDHSNMSIEDLL 624
GD + + ++ +
Sbjct: 612 GDVGSKNTDEFI 623
Score = 174 bits (440), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 89/230 (38%), Positives = 141/230 (61%), Gaps = 9/230 (3%)
Query: 85 KITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLFT 144
++ L DGS KE E S +D+ + IS+ LA + + ++V+G + + +++DC+++
Sbjct: 3 EVKLKDGSAKEFD-GEISLLDVCKSISEGLARDCVGAVVDGKIMGLMETIDSDCEVQFVK 61
Query: 145 FDSDEGRDTFWHSSAHILGQAIEQQY-GCKLCIGPCTTRGEGFYYDAFYGDLGLNPDHFK 203
FD DEG+ FWH+S+H++ AI++ Y G K IGP GFYYD D P+ +
Sbjct: 62 FDDDEGKQVFWHTSSHLMAYAIQRLYPGTKFAIGPSID--SGFYYD-LDTDHKFVPEDLE 118
Query: 204 SIDSEADKAAKQ--PFERIEVTRDQALEMFSD--NNFKVEIINDLPADKTITVYRCGPLV 259
I++E K K+ R+E++R +ALE F + ++KV++I + D TIT+Y G V
Sbjct: 119 KIEAEMKKIVKENPKLVRVEISRKEALERFKNEGQDYKVDLIENFDEDATITLYEMGDFV 178
Query: 260 DLCRGPHIPNTSFVKGFGCLKASSAYWRGNKDRESLQRVYGISYPDKKRL 309
DLCRGPH+ + +K F L + AYWRG+++ + LQR+YGIS+P KK L
Sbjct: 179 DLCRGPHLLDVKNIKAFKLLSIAGAYWRGDENNKMLQRIYGISFPKKKLL 228
>sp|Q3ABS6|SYT_CARHZ Threonine--tRNA ligase OS=Carboxydothermus hydrogenoformans (strain
Z-2901 / DSM 6008) GN=thrS PE=3 SV=1
Length = 634
Score = 273 bits (699), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 140/324 (43%), Positives = 191/324 (58%), Gaps = 39/324 (12%)
Query: 311 HAFAELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFID 370
H++ E P+RLA+ G++HR+E SG L GL RVR F QDDAHIF Q+KDE+ GV+ ID
Sbjct: 345 HSYREFPIRLAELGLVHRHELSGVLHGLMRVRCFTQDDAHIFMLPEQVKDEIIGVINLID 404
Query: 371 YAYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKI 430
YR+FGF Y ++LSTRPE +G WE A +L EAL E G P++INEGDGAFYGPKI
Sbjct: 405 EFYRLFGFEYHVELSTRPENSMGSDELWELATNSLKEALEERGLPYKINEGDGAFYGPKI 464
Query: 431 DISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAIL 490
D + D L R +QC T+QLDFQ+P++F+L Y ED + RPVMIHR + GS+ER IL
Sbjct: 465 DFHLKDCLGRTWQCGTIQLDFQMPEKFDLTYIGED-GQKHRPVMIHRVVFGSIERFIGIL 523
Query: 491 LEHYKGKWPFWLSPRQAIVCPVSEKSQPYALQVRDHIYRAGYYVDVDTTDRKIQKKPNSF 550
+EHY G +P WLSP Q V V+E+ + Y ++ ++ G V++D + I K
Sbjct: 524 IEHYAGAFPVWLSPVQVRVITVAERHREYGQEIYQKLFNQGVRVELDDRNETIGYK---- 579
Query: 551 VHARSTYIEVVFSCWEELVAGINIYPIRVSVREAQLAQYNFILVVGEEEAKSGQVSVRVR 610
+RE Q+ + ++L+VG++E + G V+VR R
Sbjct: 580 ------------------------------IREGQMQKIPYLLIVGDKEIEQGSVAVRKR 609
Query: 611 DQGDHSNMS----IEDLLKHFKEK 630
GD IE+LL +EK
Sbjct: 610 GVGDLGQKPFAEFIEELLAEIREK 633
Score = 179 bits (455), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 88/231 (38%), Positives = 144/231 (62%), Gaps = 9/231 (3%)
Query: 84 IKITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLF 143
I + P+ V+E + +++A+ +S LA AL + +NG L D+++ + + +L+
Sbjct: 2 ISLKFPNNEVREFPE-NITALEVAKTLSPRLAKEALCASINGKLIDLSQKISESGEFRLY 60
Query: 144 TFDSDEGRDTFWHSSAHILGQAIEQQY-GCKLCIGPCTTRGEGFYYDAFYGDLGLNPDHF 202
TF+ DEG+D F HSSAH++ QA+++ + KL IGP +GFYYD F + +P+
Sbjct: 61 TFEDDEGKDVFRHSSAHLMAQAVKRLFPKTKLAIGPAIK--DGFYYD-FDPEESFSPEDL 117
Query: 203 KSIDSEADKAAKQ--PFERIEVTRDQALEMFSDNN--FKVEIINDLPADKTITVYRCGPL 258
+ I++E +K K+ P ER ++RD+A++ F + +KVE++ D+P I+ YR G
Sbjct: 118 EKIEAEMEKIVKEDLPIERFVLSRDEAIKFFEEKGEIYKVELVKDIPEGVEISFYRQGEF 177
Query: 259 VDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKDRESLQRVYGISYPDKKRL 309
VDLC GPH+P+T ++K F L + AYWRGN+ + LQR+YG+S+P K L
Sbjct: 178 VDLCTGPHVPSTGYLKAFKLLNIAGAYWRGNEKNKMLQRIYGVSFPKKSML 228
>sp|O13969|SYTM_SCHPO Probable threonine--tRNA ligase, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC24C9.09 PE=3 SV=2
Length = 474
Score = 272 bits (696), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 151/349 (43%), Positives = 200/349 (57%), Gaps = 59/349 (16%)
Query: 312 AFAELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDY 371
++ ELPLR ADF LHRNEASGAL+GLTR+R F QDD HIFC IKDE++ L F+
Sbjct: 160 SYKELPLRFADFSPLHRNEASGALSGLTRLRCFHQDDGHIFCSPESIKDEIKNTLTFVKQ 219
Query: 372 AYRIFGFT-YELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKI 430
Y + G +L LSTRPE+++G L TW +AE L EAL E G+ W INEGDGAFYGPKI
Sbjct: 220 VYSLLGMNKLKLYLSTRPEEHIGSLDTWNEAENGLREALQESGETWIINEGDGAFYGPKI 279
Query: 431 DISVSDALKRKFQCATLQLDFQLPDRFNLGY--SAEDEAKTER----PVMIHRAILGSVE 484
D+ V+DA + Q AT+QLDF LP RF L Y A D A +E+ PVMIHRAI GS+E
Sbjct: 280 DVMVADARGKWHQTATIQLDFNLPQRFKLYYRTDAGDNAGSEKLIKQPVMIHRAIFGSLE 339
Query: 485 RMFAILLEHYKGKWPFWLSPRQAIVCPVSEKSQ--PYALQVRDHIY-------------R 529
R IL+EH G WPFWLSPR A++ PV++ + YA QV+ + +
Sbjct: 340 RFMGILIEHLNGHWPFWLSPRHAVILPVNQTDRILTYAKQVQKELSNQEVNESEFLPLNK 399
Query: 530 AGYYVDVDTTDRKIQKKPNSFVHARSTYIEVVFSCWEELVAGINIYPIRVSVREAQLAQY 589
YYVD++ + I K+ +RE++L Y
Sbjct: 400 NTYYVDINAEAQSIGKR----------------------------------LRESRLLNY 425
Query: 590 NFILVVGEEEAKSGQVSVRVR---DQGDHSNMSIEDLLKHFKEKLEAFQ 635
N+ +V+GE+E +SV R + D M+I+ L K F E ++A++
Sbjct: 426 NYEIVIGEDEVDKEILSVSSRHNHNSRDTRKMTIQQLKKEFIENVKAYR 474
>sp|A3DET1|SYT_CLOTH Threonine--tRNA ligase OS=Clostridium thermocellum (strain ATCC
27405 / DSM 1237) GN=thrS PE=3 SV=1
Length = 635
Score = 271 bits (692), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 140/326 (42%), Positives = 191/326 (58%), Gaps = 35/326 (10%)
Query: 307 KRLKHAFAELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVL 366
KR H++ +LP RLA+ G++HR+E SG L GL RVR F QDDAHIF QI+ E+ GV+
Sbjct: 341 KRKLHSYRDLPQRLAELGLVHRHELSGVLHGLMRVRCFTQDDAHIFMTPDQIESEILGVI 400
Query: 367 EFIDYAYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFY 426
ID Y++FGF Y ++LSTRPE +G WE+A AL AL + G ++INEGDGAFY
Sbjct: 401 SLIDDFYKVFGFKYHVELSTRPENSMGSDEDWERATNALKNALEKKGIDYKINEGDGAFY 460
Query: 427 GPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERM 486
GPKID + D++ R +QC T+QLDFQ+P+RF+L Y D K RPVMIHR + GS+ER
Sbjct: 461 GPKIDFHLEDSIGRTWQCGTIQLDFQMPERFDLTYIGPDGEK-HRPVMIHRVVFGSIERF 519
Query: 487 FAILLEHYKGKWPFWLSPRQAIVCPVSEKSQPYALQVRDHIYRAGYYVDVDTTDRKIQKK 546
AIL EHY G +P WLSP Q + P+ EK Y +V+ + G V+ D + KI K
Sbjct: 520 IAILTEHYAGAFPVWLSPVQVKILPILEKQHDYVAEVKKALEEKGVRVEADLRNEKIGYK 579
Query: 547 PNSFVHARSTYIEVVFSCWEELVAGINIYPIRVSVREAQLAQYNFILVVGEEEAKSGQVS 606
+REAQL + ++LV+G++E ++ V+
Sbjct: 580 ----------------------------------IREAQLEKVPYMLVIGDKEMENRTVA 605
Query: 607 VRVRDQGDHSNMSIEDLLKHFKEKLE 632
VR R GD M +ED + E ++
Sbjct: 606 VRSRKDGDLGPMRLEDFVNRIVEAIK 631
Score = 176 bits (446), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 99/231 (42%), Positives = 139/231 (60%), Gaps = 9/231 (3%)
Query: 84 IKITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLF 143
IKITL DGSV+E T ++A+ IS LA AL VNG + D++ PLE DC L L
Sbjct: 2 IKITLKDGSVREYNEGITIK-EVAESISAGLARVALAGEVNGEVKDLSYPLENDCTLNLL 60
Query: 144 TFDSDEGRDTFWHSSAHILGQAIEQQY-GCKLCIGPCTTRGEGFYYDAFYGDLGLNPDHF 202
TFD + GRD + H+++HIL QA+++ Y KL IGP G FYYD F + + +
Sbjct: 61 TFDDEGGRDAYRHTTSHILAQAVKRLYPDAKLAIGPAIENG--FYYD-FDVEKPFSVEDL 117
Query: 203 KSIDSEADKAAKQPF--ERIEVTRDQALEMFSDNN--FKVEIINDLPADKTITVYRCGPL 258
+ I+ E K K+ + ER + R++A++ + N +KVE+I DLP +TI+ Y+ G
Sbjct: 118 EKIEEEMKKIIKEDYKLERFTLPREEAIKFMEERNEPYKVELIRDLPEGETISFYKQGDF 177
Query: 259 VDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKDRESLQRVYGISYPDKKRL 309
VDLC GPHI +T VK F + + AYWRGN+ + LQR+YG S+ K L
Sbjct: 178 VDLCAGPHIESTGKVKAFKLMSVAGAYWRGNEKNKMLQRIYGTSFTKKSDL 228
>sp|A4J4Y7|SYT_DESRM Threonine--tRNA ligase OS=Desulfotomaculum reducens (strain MI-1)
GN=thrS PE=3 SV=1
Length = 635
Score = 269 bits (687), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 135/322 (41%), Positives = 191/322 (59%), Gaps = 35/322 (10%)
Query: 311 HAFAELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFID 370
H++ +LPLR + G++HR+E SGAL GL RVR F QDDAHIF SQIKDE+ GV++ D
Sbjct: 345 HSYRDLPLRWGELGLVHRHELSGALHGLMRVRCFTQDDAHIFMLPSQIKDEIIGVIDLFD 404
Query: 371 YAYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKI 430
Y Y FG Y ++LSTRPEK +G WE A +L +AL +++NEGDGAFYGPKI
Sbjct: 405 YFYNTFGLNYHVELSTRPEKSMGSDEMWEVATNSLRDALEAKKMDYKVNEGDGAFYGPKI 464
Query: 431 DISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAIL 490
D ++D+L R +QC T+QLDFQ+P+RFNL Y ED K RPVMIHR + GS+ER IL
Sbjct: 465 DFHLTDSLGRTWQCGTIQLDFQMPERFNLNYVGEDGQK-HRPVMIHRVVFGSIERFIGIL 523
Query: 491 LEHYKGKWPFWLSPRQAIVCPVSEKSQPYALQVRDHIYRAGYYVDVDTTDRKIQKKPNSF 550
EH+ G +P WL+P Q V P++++ YA ++ + V++D + KI K
Sbjct: 524 TEHFAGAFPVWLAPVQVKVLPITDRHHEYARELVKRLQGLDIRVELDARNEKINYK---- 579
Query: 551 VHARSTYIEVVFSCWEELVAGINIYPIRVSVREAQLAQYNFILVVGEEEAKSGQVSVRVR 610
+REAQ + ++LV+G+ E + G V+VR R
Sbjct: 580 ------------------------------IREAQTQKIPYMLVIGDREMEQGAVAVRER 609
Query: 611 DQGDHSNMSIEDLLKHFKEKLE 632
+GD +S+ D +K ++ ++
Sbjct: 610 GKGDVGAISVGDFIKKIEDDIQ 631
Score = 182 bits (461), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 98/236 (41%), Positives = 148/236 (62%), Gaps = 10/236 (4%)
Query: 84 IKITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLF 143
IKITL DGSV+E T+ +++A+ IS+ LA AL VNG + D+ PL+ D L+L
Sbjct: 2 IKITLKDGSVRE-YAVGTTVLEVAKSISQGLAREALAGKVNGKIVDLEYPLKEDAALELL 60
Query: 144 TFDSDEGRDTFWHSSAHILGQAIEQQY-GCKLCIGPCTTRGEGFYYDAFYGDLGLNPDHF 202
TF+ +EG+ + HS+AH+L QA+++ + KL IGP +G+YYD F + P
Sbjct: 61 TFNDEEGKTVYRHSTAHVLAQAVKRLFPDAKLAIGPAIQ--DGYYYD-FDVEQPFTPAQL 117
Query: 203 KSIDSEADKAAKQ--PFERIEVTRDQALEMFS--DNNFKVEIINDLPADKTITVYRCGPL 258
+ I+ E +K K+ PF+R+E++R++ALE F D +K+E+I DLP D I+ Y+ G
Sbjct: 118 ERIEEEMNKIIKEDIPFKRVELSREEALEHFKKQDEIYKIELITDLPEDAVISCYQQGDF 177
Query: 259 VDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKDRESLQRVYGISYPDKKRL-KHAF 313
DLC GPH+P+T +K + + AYWRG++ + LQR+YG S+P K L +H F
Sbjct: 178 DDLCAGPHVPSTGRLKSLKLMSIAGAYWRGSEKNKMLQRIYGTSFPKKAMLDEHLF 233
>sp|B1IMV3|SYT_CLOBK Threonine--tRNA ligase OS=Clostridium botulinum (strain Okra / Type
B1) GN=thrS PE=3 SV=1
Length = 635
Score = 268 bits (686), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 133/323 (41%), Positives = 198/323 (61%), Gaps = 35/323 (10%)
Query: 311 HAFAELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFID 370
H++ +LPLRL++ G++HR+E SGAL GL RVR F QDDAH++ + QIK+EV G+++ ID
Sbjct: 345 HSYRDLPLRLSELGIVHRHELSGALHGLMRVRCFTQDDAHLYMTKEQIKEEVVGIIKLID 404
Query: 371 YAYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKI 430
Y++FGF Y ++LSTRPE +G WE A L EAL+ GK +++NEGDGAFYGPKI
Sbjct: 405 KFYKLFGFEYFVELSTRPEDSMGSDEDWEIATNGLKEALDSIGKEYRVNEGDGAFYGPKI 464
Query: 431 DISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAIL 490
D + D + R +QC T+QLDFQ+P+RF+L Y D K RPVM+HR I GSVER IL
Sbjct: 465 DFHLKDCIGRTWQCGTIQLDFQMPERFDLSYIGADGEK-HRPVMVHRTIYGSVERFIGIL 523
Query: 491 LEHYKGKWPFWLSPRQAIVCPVSEKSQPYALQVRDHIYRAGYYVDVDTTDRKIQKKPNSF 550
+E Y G +P WL+P Q + +++ Y +V + + V++DT + KI K
Sbjct: 524 IEQYAGAFPTWLAPVQVKLMNITDAQYDYLKKVEETLKENNIRVEIDTRNEKIGYK---- 579
Query: 551 VHARSTYIEVVFSCWEELVAGINIYPIRVSVREAQLAQYNFILVVGEEEAKSGQVSVRVR 610
+REAQL + ++L++G++E ++G+V+VR R
Sbjct: 580 ------------------------------IREAQLQKVPYMLILGDKEVEAGKVAVRSR 609
Query: 611 DQGDHSNMSIEDLLKHFKEKLEA 633
GD +S+E+ ++ K +++A
Sbjct: 610 KDGDLGAISLEEFIEKIKNEIKA 632
Score = 163 bits (413), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 91/231 (39%), Positives = 131/231 (56%), Gaps = 9/231 (3%)
Query: 84 IKITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLF 143
IKITL DG V E + DIA IS +L AL + ++G D+ L D L++
Sbjct: 2 IKITLKDGKVMEFEEG-IKISDIAMKISPALYKKALAAKIDGETMDLMTELHKDSSLEIL 60
Query: 144 TFDSDEGRDTFWHSSAHILGQAIEQQY-GCKLCIGPCTTRGEGFYYDAFYGDLGLNPDHF 202
TF+ + G+ H+ AHIL QA+++ Y KL IGP G FYYD F D P+
Sbjct: 61 TFEDEMGKWALRHTGAHILAQAVKRLYPEVKLAIGPAIDTG--FYYD-FEADFTFTPEIL 117
Query: 203 KSIDSEADKAAKQ--PFERIEVTRDQALEMFSDNN--FKVEIINDLPADKTITVYRCGPL 258
+ I++E K K+ ER E+ R++A+ + +NN +KVE+I DLP + I+ Y+ G
Sbjct: 118 EKIEAEIKKIIKENHKLERFELPREEAINLMKENNEDYKVELIEDLPEGEVISFYKQGDF 177
Query: 259 VDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKDRESLQRVYGISYPDKKRL 309
DLC GPH+P+T VK L + AYWRGN++ + LQR+YG ++ K L
Sbjct: 178 TDLCAGPHVPSTGKVKSVKLLSLAGAYWRGNENNKMLQRIYGTAFTKKSEL 228
>sp|B2A5P2|SYT_NATTJ Threonine--tRNA ligase OS=Natranaerobius thermophilus (strain ATCC
BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=thrS PE=3 SV=1
Length = 636
Score = 268 bits (685), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 130/322 (40%), Positives = 197/322 (61%), Gaps = 35/322 (10%)
Query: 311 HAFAELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFID 370
+++ + PLR+A+ G +HR+E SGAL GL R R F QDDAHIF SQ+++E+ V+ +D
Sbjct: 347 YSYRDFPLRVAELGKVHRHELSGALHGLLRARSFTQDDAHIFMLPSQVEEELENVINLVD 406
Query: 371 YAYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKI 430
Y +FGF Y ++LST+PEK +G W++A AL L + G + +NEGDGAFYGPKI
Sbjct: 407 RFYSVFGFNYYVELSTKPEKAMGSDEIWDRAINALKSVLEKRGIKYIVNEGDGAFYGPKI 466
Query: 431 DISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAIL 490
D + DA+ R +QC+T+QLDF LP+RF+L Y ED + RPVMIHR I G++ER FA+L
Sbjct: 467 DFQLEDAIGRSWQCSTIQLDFLLPERFDLTYIGED-GQKHRPVMIHRVIYGAIERFFALL 525
Query: 491 LEHYKGKWPFWLSPRQAIVCPVSEKSQPYALQVRDHIYRAGYYVDVDTTDRKIQKKPNSF 550
+EHY+GK+P WL+PRQA++ P++++ Y + + G D+D + KI K
Sbjct: 526 IEHYEGKFPLWLAPRQAVIIPIADRHMEYGKDITKQLESEGIRADLDQRNEKIGYK---- 581
Query: 551 VHARSTYIEVVFSCWEELVAGINIYPIRVSVREAQLAQYNFILVVGEEEAKSGQVSVRVR 610
+R+AQL + ++L+VG++E ++ VSVR R
Sbjct: 582 ------------------------------IRDAQLKKVPYMLIVGDDEVENKTVSVRTR 611
Query: 611 DQGDHSNMSIEDLLKHFKEKLE 632
+ GD + S+ +L+ K +++
Sbjct: 612 EDGDIGSKSVAELVDEIKVEID 633
Score = 155 bits (391), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/240 (38%), Positives = 146/240 (60%), Gaps = 11/240 (4%)
Query: 84 IKITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLF 143
+KITL DGSVKE ++ ++ +D+A+ IS LA A+ + V+G + + L +C++++
Sbjct: 2 LKITLKDGSVKEIEKG-SNVLDLAKSISNRLAKEAVGAKVDGKTVGLNKELNENCEVEIL 60
Query: 144 TFDSDEGRDTFWHSSAHILGQAIEQQY-GCKLCIGPCTTRGEGFYYDAFYGDLGLNPDHF 202
+F+ DEG D + H+S+HIL A+++ Y KL IGP +GFYYD F + L+
Sbjct: 61 SFEDDEGCDIYRHTSSHILAHAVKRLYDNVKLGIGPPIK--DGFYYD-FDLEHSLSDKDL 117
Query: 203 KSIDSEADKAAKQ--PFERIEVTRDQALEMFSD--NNFKVEIINDLPADKTITVYRCGPL 258
+ I E K K+ P ER RD+A+EMF + ++K+E+I DL D+ I Y+ G
Sbjct: 118 EDIKKEMKKIIKEDLPIERKVYKRDEAIEMFKEMGEDYKIELIQDLGEDEEICCYQQGDF 177
Query: 259 VDLCRGPHIPNTSFVK--GFGCLKASSAYWRGNKDRESLQRVYGISYPDKKRLKHAFAEL 316
+DLC+GPH+P+T +K LK + AYWRG+++R LQR+YG S+ K +L+ L
Sbjct: 178 IDLCQGPHLPSTGKIKDTALDLLKVAGAYWRGDENRAMLQRIYGTSFIKKSQLEEYIQRL 237
>sp|C0QAP1|SYT_DESAH Threonine--tRNA ligase OS=Desulfobacterium autotrophicum (strain
ATCC 43914 / DSM 3382 / HRM2) GN=thrS PE=3 SV=1
Length = 636
Score = 267 bits (682), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 134/314 (42%), Positives = 186/314 (59%), Gaps = 35/314 (11%)
Query: 311 HAFAELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFID 370
H++ +LPLR + G++HR+E SGAL+GL RVR F QDDAHIF QI+ E+ GVLE ++
Sbjct: 341 HSYRDLPLRAGEIGLVHRHELSGALSGLFRVRAFHQDDAHIFMTPEQIESEILGVLELVE 400
Query: 371 YAYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKI 430
Y FG + L+LSTRP+K +G W +A L AL+++G+P+ INEGDGAFYGPKI
Sbjct: 401 RIYSRFGLGFHLELSTRPKKSIGSDEQWAEATNGLKNALDKYGQPYAINEGDGAFYGPKI 460
Query: 431 DISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAIL 490
DI + DAL R +QC T+QLD LP+RF+L Y D K RP+MIHR I GS+ER F IL
Sbjct: 461 DIHIKDALGRTWQCGTVQLDMALPERFDLTYKGADNEK-HRPIMIHRVIYGSIERFFGIL 519
Query: 491 LEHYKGKWPFWLSPRQAIVCPVSEKSQPYALQVRDHIYRAGYYVDVDTTDRKIQKKPNSF 550
+EH+ GK+P WL+P QA+V P+++ +A V+ + G DVD ++KK
Sbjct: 520 VEHFAGKFPLWLAPVQAVVLPINDDLADHAQTVKKELESNGIRCDVDLRTESLKKK---- 575
Query: 551 VHARSTYIEVVFSCWEELVAGINIYPIRVSVREAQLAQYNFILVVGEEEAKSGQVSVRVR 610
+REAQ+ I+ +GE+E +SG +SVR
Sbjct: 576 ------------------------------IREAQVNYVPLIITIGEKEKESGTLSVRTL 605
Query: 611 DQGDHSNMSIEDLL 624
D +S+ D +
Sbjct: 606 DGKVRMGLSMADFI 619
Score = 185 bits (470), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 98/231 (42%), Positives = 146/231 (63%), Gaps = 11/231 (4%)
Query: 84 IKITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLF 143
I ITLPD S+K K + MD+A+GIS+ A N + ++G L D+ + DC ++L
Sbjct: 2 INITLPDDSIKSFKEYPKG-MDVARGISEGFARNCVAMEIDGQLLDLDVEIRNDCAVRLI 60
Query: 144 TFDSDEGRDTFWHSSAHILGQAIEQQYG-CKLCIGPCTTRGEGFYYDAFYGDLG-LNPDH 201
T E + HS+AH++ +A++ + KL IGP +GFYYD D+ ++
Sbjct: 61 TTRDAEAVEILRHSAAHVMAEAVQNLHADAKLTIGPVVE--DGFYYDI---DMAPISDAD 115
Query: 202 FKSIDSEADK--AAKQPFERIEVTRDQALEMFSDNNFKVEIINDLPADKTITVYRCGPLV 259
F I++E K AK+PF+R E+T+ +ALE+F DN +KVE+IN L D+TI++Y+ G V
Sbjct: 116 FPKIEAEMAKIVKAKKPFQRSEITKQEALELFKDNPYKVELINGLD-DQTISIYQQGDFV 174
Query: 260 DLCRGPHIPNTSFVKGFGCLKASSAYWRGNKDRESLQRVYGISYPDKKRLK 310
DLCRGPHIP+T +KG +K S AYWR ++++ LQR+YG ++ DKK LK
Sbjct: 175 DLCRGPHIPHTGMIKGLKLMKTSGAYWRADQEKAQLQRLYGTAFFDKKELK 225
>sp|Q97GK4|SYT_CLOAB Threonine--tRNA ligase OS=Clostridium acetobutylicum (strain ATCC
824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787)
GN=thrS PE=3 SV=1
Length = 637
Score = 267 bits (682), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 132/314 (42%), Positives = 187/314 (59%), Gaps = 35/314 (11%)
Query: 311 HAFAELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFID 370
H++ ELP++LA+ G++HR+E SGAL GL RVR F QDDAHIF + QI +E+ GV++ ID
Sbjct: 345 HSYRELPIKLAEIGLVHRHEKSGALHGLMRVRCFNQDDAHIFMTKEQITEEILGVIKLID 404
Query: 371 YAYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKI 430
Y++FGF Y ++LSTRPE +G WE A L ALN + +NEGDGAFYGPKI
Sbjct: 405 SFYKVFGFEYYVELSTRPEDSMGSDEDWEAATNGLINALNAANLEYIVNEGDGAFYGPKI 464
Query: 431 DISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAIL 490
D + D + R +QC T+QLDFQ+P+RF++ Y D K RPVM+HR + GS+ER IL
Sbjct: 465 DFHLKDCIGRTWQCGTIQLDFQMPERFDINYIGADGEK-HRPVMVHRVVFGSIERFIGIL 523
Query: 491 LEHYKGKWPFWLSPRQAIVCPVSEKSQPYALQVRDHIYRAGYYVDVDTTDRKIQKKPNSF 550
+EHY G +P WL+P Q V +++ Y + + + AG V+ D + KI K
Sbjct: 524 IEHYAGAFPTWLAPVQVKVMNITDSQVEYVDAISEKLKEAGIRVEKDVRNEKIGYK---- 579
Query: 551 VHARSTYIEVVFSCWEELVAGINIYPIRVSVREAQLAQYNFILVVGEEEAKSGQVSVRVR 610
+REAQL + +++V+G++E K G +SVR R
Sbjct: 580 ------------------------------IREAQLKKVPYMIVIGDKEIKEGIISVRSR 609
Query: 611 DQGDHSNMSIEDLL 624
+GD +M+IED +
Sbjct: 610 KEGDLGSMNIEDFI 623
Score = 167 bits (422), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 90/231 (38%), Positives = 136/231 (58%), Gaps = 9/231 (3%)
Query: 84 IKITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLF 143
IK+TL DG V E + T+P D+A+ IS L A+ + +NG ++ ++ DC+L++
Sbjct: 2 IKVTLKDGKVMEFEN-TTTPGDVAKAISPGLYKKAISAKINGKRAELMTNIDKDCNLEIL 60
Query: 144 TFDSDEGRDTFWHSSAHILGQAIEQQY-GCKLCIGPCTTRGEGFYYDAFYGDLGLNPDHF 202
TFD ++G+ T H+++HIL QAI++ Y KL IGP GFYYD D + F
Sbjct: 61 TFDDEDGKWTLRHTASHILAQAIKRLYPEAKLAIGPAID--SGFYYD-IDADFSFTEEMF 117
Query: 203 KSIDSEADKAAKQ--PFERIEVTRDQALEMFSDNN--FKVEIINDLPADKTITVYRCGPL 258
I+ E +K K+ ER E+ R++A+E + +KVE+I DLP D I+ Y+ G
Sbjct: 118 AKIEKEMNKIIKENLKLERFELPREKAIEYMEEKKEPYKVELIKDLPEDAVISFYKQGEF 177
Query: 259 VDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKDRESLQRVYGISYPDKKRL 309
VDLC GPH+ +T+ VK + + AYWRGN+ + LQR+YG ++ K L
Sbjct: 178 VDLCAGPHVESTAKVKVIKLMSVAGAYWRGNEKNKMLQRIYGTAFTKKADL 228
>sp|A7GI05|SYT_CLOBL Threonine--tRNA ligase OS=Clostridium botulinum (strain Langeland /
NCTC 10281 / Type F) GN=thrS PE=3 SV=1
Length = 635
Score = 266 bits (681), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 132/322 (40%), Positives = 197/322 (61%), Gaps = 35/322 (10%)
Query: 311 HAFAELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFID 370
H++ +LPLRL++ G++HR+E SGAL GL RVR F QDDAH++ + QIK+EV G+++ ID
Sbjct: 345 HSYRDLPLRLSELGIVHRHELSGALHGLMRVRCFTQDDAHLYMTKEQIKEEVIGIIKLID 404
Query: 371 YAYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKI 430
Y++FGF Y ++LSTRPE +G WE A L EAL+ GK +++NEGDGAFYGPKI
Sbjct: 405 EFYKLFGFEYFVELSTRPEDSMGSDEDWEIATNGLREALDSIGKEYRVNEGDGAFYGPKI 464
Query: 431 DISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAIL 490
D + D + R +QC T+QLDFQ+P+RF+L Y D K RPVM+HR I GSVER IL
Sbjct: 465 DFHLKDCIGRTWQCGTIQLDFQMPERFDLSYIGADGEK-HRPVMVHRTIYGSVERFIGIL 523
Query: 491 LEHYKGKWPFWLSPRQAIVCPVSEKSQPYALQVRDHIYRAGYYVDVDTTDRKIQKKPNSF 550
+E Y G +P WL+P Q + +++ Y +V + + V++DT + KI K
Sbjct: 524 IEQYAGAFPTWLAPVQVKLMNITDSQYDYLKKVEETLKENNIRVEIDTRNEKIGYK---- 579
Query: 551 VHARSTYIEVVFSCWEELVAGINIYPIRVSVREAQLAQYNFILVVGEEEAKSGQVSVRVR 610
+REAQL + ++L++G++E ++G+V+VR R
Sbjct: 580 ------------------------------IREAQLQKVPYMLILGDKEVEAGKVAVRSR 609
Query: 611 DQGDHSNMSIEDLLKHFKEKLE 632
GD +S+E+ ++ K +++
Sbjct: 610 KDGDLGAISLEEFIEKIKNEIK 631
Score = 158 bits (399), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 89/231 (38%), Positives = 129/231 (55%), Gaps = 9/231 (3%)
Query: 84 IKITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLF 143
IKITL DG V E + DIA IS +L AL + ++G D+ L D L++
Sbjct: 2 IKITLKDGKVMEIEEG-IKISDIAMKISPALYKKALAAKIDGETVDLMTELHKDSSLEIL 60
Query: 144 TFDSDEGRDTFWHSSAHILGQAIEQQY-GCKLCIGPCTTRGEGFYYDAFYGDLGLNPDHF 202
TF+ + G+ H+ AHIL QA+++ Y KL IGP G FYYD F D P+
Sbjct: 61 TFEDEMGKWALRHTGAHILAQAVKRLYPEVKLAIGPAIDTG--FYYD-FEADFTFTPEML 117
Query: 203 KSIDSEADKAAKQ--PFERIEVTRDQALEMFSDNN--FKVEIINDLPADKTITVYRCGPL 258
+ I++E K K+ ER E+ R++A+ + + N +KVE+I DLP + I+ Y+ G
Sbjct: 118 EKIEAEIKKIIKENHKLERFELPREEAINLMKEKNEDYKVELIEDLPEGEVISFYKQGDF 177
Query: 259 VDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKDRESLQRVYGISYPDKKRL 309
DLC GPH+P+T VK L + AYWRG++ + LQR+YG ++ K L
Sbjct: 178 TDLCAGPHVPSTGKVKSVKLLSLAGAYWRGDEKNKMLQRIYGTAFTKKSEL 228
>sp|A5I6L8|SYT_CLOBH Threonine--tRNA ligase OS=Clostridium botulinum (strain Hall / ATCC
3502 / NCTC 13319 / Type A) GN=thrS PE=3 SV=1
Length = 635
Score = 266 bits (681), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 132/322 (40%), Positives = 197/322 (61%), Gaps = 35/322 (10%)
Query: 311 HAFAELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFID 370
H++ +LPLRL++ G++HR+E SGAL GL RVR F QDDAH++ + QIK+EV G+++ ID
Sbjct: 345 HSYRDLPLRLSELGIVHRHELSGALHGLMRVRCFTQDDAHLYMTKEQIKEEVVGIIKLID 404
Query: 371 YAYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKI 430
Y++FGF Y ++LSTRPE +G WE A L EAL+ GK +++NEGDGAFYGPKI
Sbjct: 405 KFYKLFGFEYFVELSTRPEDSMGSDEDWEIATNGLREALDSIGKEYRVNEGDGAFYGPKI 464
Query: 431 DISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAIL 490
D + D + R +QC T+QLDFQ+P+RF+L Y D K RPVM+HR I GSVER IL
Sbjct: 465 DFHLKDCIGRTWQCGTIQLDFQMPERFDLSYIGADGEK-HRPVMVHRTIYGSVERFIGIL 523
Query: 491 LEHYKGKWPFWLSPRQAIVCPVSEKSQPYALQVRDHIYRAGYYVDVDTTDRKIQKKPNSF 550
+E Y G +P WL+P Q + +++ Y +V + + V++DT + KI K
Sbjct: 524 IEQYAGAFPTWLAPVQVKLMNITDSQYDYLKKVEEALKENNIRVEIDTRNEKIGYK---- 579
Query: 551 VHARSTYIEVVFSCWEELVAGINIYPIRVSVREAQLAQYNFILVVGEEEAKSGQVSVRVR 610
+REAQL + ++L++G++E ++G+V+VR R
Sbjct: 580 ------------------------------IREAQLQKVPYMLILGDKEVEAGKVAVRSR 609
Query: 611 DQGDHSNMSIEDLLKHFKEKLE 632
GD +S+E+ ++ K +++
Sbjct: 610 KDGDLGAISLEEFIEKIKNEIK 631
Score = 157 bits (396), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 87/231 (37%), Positives = 131/231 (56%), Gaps = 9/231 (3%)
Query: 84 IKITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLF 143
IKITL DG V E + DIA IS +L AL + ++G D+ L D L++
Sbjct: 2 IKITLKDGKVMEFEEG-IKISDIAMKISPALYKKALAAKIDGETVDLMTELHKDSSLEIL 60
Query: 144 TFDSDEGRDTFWHSSAHILGQAIEQQY-GCKLCIGPCTTRGEGFYYDAFYGDLGLNPDHF 202
TF+ + G+ H+ +H+L QA+++ Y KL IGP G FYYD F D P+
Sbjct: 61 TFEDEMGKWALRHTGSHMLAQAVKRLYPEVKLAIGPAIDTG--FYYD-FEADFTFTPEML 117
Query: 203 KSIDSEADKAAKQ--PFERIEVTRDQALEMFSDNN--FKVEIINDLPADKTITVYRCGPL 258
+ I++E K K+ ER E+ R++A+++ + N +KVE+I DLP + I+ Y+ G
Sbjct: 118 EKIEAEIKKIIKENHKLERFELPREEAIKLMKEKNEDYKVELIEDLPEGEVISFYKQGDF 177
Query: 259 VDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKDRESLQRVYGISYPDKKRL 309
DLC GPH+P+T VK L + AYWRG+++ + LQR+YG ++ K L
Sbjct: 178 TDLCAGPHVPSTGKVKSVKLLSLAGAYWRGDENNKMLQRIYGTAFTKKSEL 228
>sp|A7FY87|SYT_CLOB1 Threonine--tRNA ligase OS=Clostridium botulinum (strain ATCC 19397
/ Type A) GN=thrS PE=3 SV=1
Length = 635
Score = 266 bits (681), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 132/322 (40%), Positives = 197/322 (61%), Gaps = 35/322 (10%)
Query: 311 HAFAELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFID 370
H++ +LPLRL++ G++HR+E SGAL GL RVR F QDDAH++ + QIK+EV G+++ ID
Sbjct: 345 HSYRDLPLRLSELGIVHRHELSGALHGLMRVRCFTQDDAHLYMTKEQIKEEVVGIIKLID 404
Query: 371 YAYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKI 430
Y++FGF Y ++LSTRPE +G WE A L EAL+ GK +++NEGDGAFYGPKI
Sbjct: 405 KFYKLFGFEYFVELSTRPEDSMGSDEDWEIATNGLREALDSIGKEYRVNEGDGAFYGPKI 464
Query: 431 DISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAIL 490
D + D + R +QC T+QLDFQ+P+RF+L Y D K RPVM+HR I GSVER IL
Sbjct: 465 DFHLKDCIGRTWQCGTIQLDFQMPERFDLSYIGADGEK-HRPVMVHRTIYGSVERFIGIL 523
Query: 491 LEHYKGKWPFWLSPRQAIVCPVSEKSQPYALQVRDHIYRAGYYVDVDTTDRKIQKKPNSF 550
+E Y G +P WL+P Q + +++ Y +V + + V++DT + KI K
Sbjct: 524 IEQYAGAFPTWLAPVQVKLMNITDSQYDYLKKVEEALKENNIRVEIDTRNEKIGYK---- 579
Query: 551 VHARSTYIEVVFSCWEELVAGINIYPIRVSVREAQLAQYNFILVVGEEEAKSGQVSVRVR 610
+REAQL + ++L++G++E ++G+V+VR R
Sbjct: 580 ------------------------------IREAQLQKVPYMLILGDKEVEAGKVAVRSR 609
Query: 611 DQGDHSNMSIEDLLKHFKEKLE 632
GD +S+E+ ++ K +++
Sbjct: 610 KDGDLGAISLEEFIEKIKNEIK 631
Score = 157 bits (396), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 87/231 (37%), Positives = 131/231 (56%), Gaps = 9/231 (3%)
Query: 84 IKITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLF 143
IKITL DG V E + DIA IS +L AL + ++G D+ L D L++
Sbjct: 2 IKITLKDGKVMEFEEG-IKISDIAMKISPALYKKALAAKIDGETVDLMTELHKDSSLEIL 60
Query: 144 TFDSDEGRDTFWHSSAHILGQAIEQQY-GCKLCIGPCTTRGEGFYYDAFYGDLGLNPDHF 202
TF+ + G+ H+ +H+L QA+++ Y KL IGP G FYYD F D P+
Sbjct: 61 TFEDEMGKWALRHTGSHMLAQAVKRLYPEVKLAIGPAIDTG--FYYD-FEADFTFTPEML 117
Query: 203 KSIDSEADKAAKQ--PFERIEVTRDQALEMFSDNN--FKVEIINDLPADKTITVYRCGPL 258
+ I++E K K+ ER E+ R++A+++ + N +KVE+I DLP + I+ Y+ G
Sbjct: 118 EKIEAEIKKIIKENHKLERFELPREEAIKLMKEKNEDYKVELIEDLPEGEVISFYKQGDF 177
Query: 259 VDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKDRESLQRVYGISYPDKKRL 309
DLC GPH+P+T VK L + AYWRG+++ + LQR+YG ++ K L
Sbjct: 178 TDLCAGPHVPSTGKVKSVKLLSLAGAYWRGDENNKMLQRIYGTAFTKKSEL 228
>sp|C3KTK0|SYT_CLOB6 Threonine--tRNA ligase OS=Clostridium botulinum (strain 657 / Type
Ba4) GN=thrS PE=3 SV=1
Length = 635
Score = 266 bits (680), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 131/323 (40%), Positives = 197/323 (60%), Gaps = 35/323 (10%)
Query: 311 HAFAELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFID 370
H++ +LPLRL++ G++HR+E SGAL GL RVR F QDDAH++ + QIK+E+ G+++ ID
Sbjct: 345 HSYRDLPLRLSELGIVHRHELSGALHGLMRVRCFTQDDAHLYMTKEQIKEEIVGIIKLID 404
Query: 371 YAYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKI 430
Y++FGF Y ++LSTRPE +G WE A L EAL+ GK +++NEGDGAFYGPKI
Sbjct: 405 KFYKLFGFEYFVELSTRPEDSMGSDEDWEIATNGLREALDSIGKEYRVNEGDGAFYGPKI 464
Query: 431 DISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAIL 490
D + D + R +QC T+QLDFQ+P+RF+L Y D K RPVM+HR I GSVER IL
Sbjct: 465 DFHLKDCIGRTWQCGTIQLDFQMPERFDLSYIGADGEK-HRPVMVHRTIYGSVERFIGIL 523
Query: 491 LEHYKGKWPFWLSPRQAIVCPVSEKSQPYALQVRDHIYRAGYYVDVDTTDRKIQKKPNSF 550
+E Y G +P WL+P Q + +++ Y +V + + V++DT + KI K
Sbjct: 524 IEQYAGAFPTWLAPVQVKLMNITDAQYDYLKKVEEALKENNIRVEIDTRNEKIGYK---- 579
Query: 551 VHARSTYIEVVFSCWEELVAGINIYPIRVSVREAQLAQYNFILVVGEEEAKSGQVSVRVR 610
+REAQL + ++L++G++E ++G+V+VR R
Sbjct: 580 ------------------------------IREAQLQKVPYMLILGDKEVEAGKVAVRSR 609
Query: 611 DQGDHSNMSIEDLLKHFKEKLEA 633
GD +S+E+ ++ K +++
Sbjct: 610 KDGDLGAISLEEFIEKIKNEIKV 632
Score = 159 bits (402), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 89/231 (38%), Positives = 130/231 (56%), Gaps = 9/231 (3%)
Query: 84 IKITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLF 143
IKITL DG V E + DIA IS +L AL + ++G D+ L D L++
Sbjct: 2 IKITLKDGKVMEFEEG-IKISDIAMKISPALYKKALAAKIDGETVDLMTELHKDSSLEIL 60
Query: 144 TFDSDEGRDTFWHSSAHILGQAIEQQY-GCKLCIGPCTTRGEGFYYDAFYGDLGLNPDHF 202
TF+ + G+ H+ AHIL QA+++ Y KL IGP G FYYD F D P+
Sbjct: 61 TFEDEMGKWALRHTGAHILAQAVKRLYPEVKLAIGPAIDTG--FYYD-FEADFTFTPEML 117
Query: 203 KSIDSEADKAAKQ--PFERIEVTRDQALEMFSDNN--FKVEIINDLPADKTITVYRCGPL 258
+ I++E K K+ ER E+ R++A+ + + N +KVE+I DLP + I+ Y+ G
Sbjct: 118 EKIEAEIKKIIKENHKLERFELPREEAINLMKEKNEDYKVELIEDLPEGEVISFYKQGDF 177
Query: 259 VDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKDRESLQRVYGISYPDKKRL 309
DLC GPH+P+T VK L + AYWRG+++ + LQR+YG ++ K L
Sbjct: 178 TDLCAGPHVPSTGKVKSVKLLSLAGAYWRGDENNKMLQRIYGTAFTKKSEL 228
>sp|C1FKN0|SYT_CLOBJ Threonine--tRNA ligase OS=Clostridium botulinum (strain Kyoto /
Type A2) GN=thrS PE=3 SV=1
Length = 635
Score = 266 bits (679), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 131/322 (40%), Positives = 197/322 (61%), Gaps = 35/322 (10%)
Query: 311 HAFAELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFID 370
H++ +LPLRL++ G++HR+E SGAL GL RVR F QDDAH++ + QIK+E+ G+++ ID
Sbjct: 345 HSYRDLPLRLSELGIVHRHELSGALHGLMRVRCFTQDDAHLYMTKEQIKEEIVGIIKLID 404
Query: 371 YAYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKI 430
Y++FGF Y ++LSTRPE +G WE A L EAL+ GK +++NEGDGAFYGPKI
Sbjct: 405 KFYKLFGFEYFVELSTRPEDSMGSDEDWEIATNGLREALDSIGKEYRVNEGDGAFYGPKI 464
Query: 431 DISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAIL 490
D + D + R +QC T+QLDFQ+P+RF+L Y D K RPVM+HR I GSVER IL
Sbjct: 465 DFHLKDCIGRTWQCGTIQLDFQMPERFDLSYIGADGEK-HRPVMVHRTIYGSVERFIGIL 523
Query: 491 LEHYKGKWPFWLSPRQAIVCPVSEKSQPYALQVRDHIYRAGYYVDVDTTDRKIQKKPNSF 550
+E Y G +P WL+P Q + +++ Y +V + + V++DT + KI K
Sbjct: 524 IEQYAGAFPTWLAPVQVKLMNITDSQYDYLKKVEEALKENNIRVEIDTRNEKIGYK---- 579
Query: 551 VHARSTYIEVVFSCWEELVAGINIYPIRVSVREAQLAQYNFILVVGEEEAKSGQVSVRVR 610
+REAQL + ++L++G++E ++G+V+VR R
Sbjct: 580 ------------------------------IREAQLQKVPYMLILGDKEVEAGKVAVRSR 609
Query: 611 DQGDHSNMSIEDLLKHFKEKLE 632
GD +S+E+ ++ K +++
Sbjct: 610 KDGDLGAISLEEFIEKIKNEIK 631
Score = 158 bits (399), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 88/231 (38%), Positives = 131/231 (56%), Gaps = 9/231 (3%)
Query: 84 IKITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLF 143
IKITL DG V E + DIA IS +L AL + ++G D+ L D L++
Sbjct: 2 IKITLKDGKVMEFEEG-IKISDIAMKISPALYKKALAAKIDGETVDLMTELHKDSSLEIL 60
Query: 144 TFDSDEGRDTFWHSSAHILGQAIEQQY-GCKLCIGPCTTRGEGFYYDAFYGDLGLNPDHF 202
TF+ + G+ T H+ +H+L QA+++ Y KL IGP G FYYD F D P+
Sbjct: 61 TFEDEMGKWTLRHTGSHMLAQAVKRLYPEVKLAIGPAIDTG--FYYD-FEADFTFTPEML 117
Query: 203 KSIDSEADKAAKQ--PFERIEVTRDQALEMFSDNN--FKVEIINDLPADKTITVYRCGPL 258
+ I++E K K+ ER E+ R++A+++ + N +KVE+I DLP + I+ Y+ G
Sbjct: 118 EKIEAEIKKIIKENHKLERFELPREEAIKLMKEKNEDYKVELIEDLPEGEVISFYKQGDF 177
Query: 259 VDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKDRESLQRVYGISYPDKKRL 309
DLC GPH+P+T VK L + AYWRG++ + LQR+YG ++ K L
Sbjct: 178 TDLCAGPHVPSTGKVKSVKLLSLAGAYWRGDEKNKMLQRIYGTAFTKKSEL 228
>sp|B1L0T7|SYT_CLOBM Threonine--tRNA ligase OS=Clostridium botulinum (strain Loch Maree
/ Type A3) GN=thrS PE=3 SV=1
Length = 635
Score = 266 bits (679), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 131/323 (40%), Positives = 197/323 (60%), Gaps = 35/323 (10%)
Query: 311 HAFAELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFID 370
H++ +LPLRL++ G++HR+E SGAL GL RVR F QDDAH++ + QIK+E+ G+++ ID
Sbjct: 345 HSYRDLPLRLSELGIVHRHELSGALHGLMRVRCFTQDDAHLYMTKEQIKEEIVGIIKLID 404
Query: 371 YAYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKI 430
Y++FGF Y ++LSTRPE +G WE A L EAL+ GK +++NEGDGAFYGPKI
Sbjct: 405 KFYKLFGFEYFVELSTRPEDSMGSDEDWEIATNGLREALDSIGKEYRVNEGDGAFYGPKI 464
Query: 431 DISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAIL 490
D + D + R +QC T+QLDFQ+P+RF+L Y D K RPVM+HR I GSVER IL
Sbjct: 465 DFHLKDCIGRTWQCGTIQLDFQMPERFDLSYIGADGEK-HRPVMVHRTIYGSVERFIGIL 523
Query: 491 LEHYKGKWPFWLSPRQAIVCPVSEKSQPYALQVRDHIYRAGYYVDVDTTDRKIQKKPNSF 550
+E Y G +P WL+P Q + +++ Y +V + + V++DT + KI K
Sbjct: 524 IEQYAGAFPTWLAPVQVKLMNITDAQYDYLKKVEEALKENNIRVEIDTRNEKIGYK---- 579
Query: 551 VHARSTYIEVVFSCWEELVAGINIYPIRVSVREAQLAQYNFILVVGEEEAKSGQVSVRVR 610
+REAQL + ++L++G++E ++G+V+VR R
Sbjct: 580 ------------------------------IREAQLQKIPYMLILGDKEVEAGKVAVRSR 609
Query: 611 DQGDHSNMSIEDLLKHFKEKLEA 633
GD +S+E+ ++ K +++
Sbjct: 610 KDGDLGAISLEEFIEKIKNEIKV 632
Score = 160 bits (404), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 89/231 (38%), Positives = 131/231 (56%), Gaps = 9/231 (3%)
Query: 84 IKITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLF 143
IKITL DG V E + DIA IS +L AL + ++G D+ L D L++
Sbjct: 2 IKITLKDGKVMEFEEG-IKISDIAMKISPALYKKALAAKIDGETVDLMTELHKDSSLEIL 60
Query: 144 TFDSDEGRDTFWHSSAHILGQAIEQQY-GCKLCIGPCTTRGEGFYYDAFYGDLGLNPDHF 202
TF+ + G+ H+ AHIL QA+++ Y KL IGP G FYYD F D P+
Sbjct: 61 TFEDEMGKWALRHTGAHILAQAVKRLYPEVKLAIGPAIDTG--FYYD-FEADFTFTPEML 117
Query: 203 KSIDSEADKAAKQ--PFERIEVTRDQALEMFSDNN--FKVEIINDLPADKTITVYRCGPL 258
+ I++E K K+ ER E+ R++A+++ + N +KVE+I DLP + I+ Y+ G
Sbjct: 118 EKIEAEIKKIIKENHKLERFELPREEAIDLMKEKNEDYKVELIEDLPEGEVISFYKQGDF 177
Query: 259 VDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKDRESLQRVYGISYPDKKRL 309
DLC GPH+P+T VK L + AYWRG+++ + LQR+YG ++ K L
Sbjct: 178 TDLCAGPHVPSTGKVKSVKLLSLAGAYWRGDENNKMLQRIYGTAFTKKSEL 228
>sp|A0PZN1|SYT_CLONN Threonine--tRNA ligase OS=Clostridium novyi (strain NT) GN=thrS
PE=3 SV=1
Length = 637
Score = 266 bits (679), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 135/322 (41%), Positives = 188/322 (58%), Gaps = 35/322 (10%)
Query: 311 HAFAELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFID 370
H++ ELP+RL + G++HR+E SGAL GL RVR F QDDAHIF + QI E+ GV++ ID
Sbjct: 345 HSYRELPIRLGELGLVHRHEYSGALHGLMRVRNFTQDDAHIFMTKEQITSEILGVIKMID 404
Query: 371 YAYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKI 430
Y +FGF Y ++LSTRPE +G WE A L +ALNE G ++INEGDGAFYGPKI
Sbjct: 405 NFYSLFGFEYFVELSTRPEDSMGSDEDWEAATNGLIKALNEAGLEYKINEGDGAFYGPKI 464
Query: 431 DISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAIL 490
D + D L R +QC T+QLDFQ+P+RF+L Y D K RPVM HR I GS+ER IL
Sbjct: 465 DFHLRDCLGRTWQCGTIQLDFQMPERFDLSYVGADGEK-HRPVMAHRVIFGSIERFIGIL 523
Query: 491 LEHYKGKWPFWLSPRQAIVCPVSEKSQPYALQVRDHIYRAGYYVDVDTTDRKIQKKPNSF 550
EHY G +P WL+P Q + +++ Y +++ + G V++D + KI K
Sbjct: 524 TEHYAGAFPTWLAPVQVKIMNITDNQVEYCKEIQKVLNENGIRVELDLRNEKIGYK---- 579
Query: 551 VHARSTYIEVVFSCWEELVAGINIYPIRVSVREAQLAQYNFILVVGEEEAKSGQVSVRVR 610
+REAQL + ++LV+G++E ++VR R
Sbjct: 580 ------------------------------IREAQLQKIPYMLVLGDKEMNEKTIAVRAR 609
Query: 611 DQGDHSNMSIEDLLKHFKEKLE 632
QGD M++ D + K+++E
Sbjct: 610 KQGDLGAMNLTDFVAMVKKEIE 631
Score = 160 bits (405), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 89/232 (38%), Positives = 133/232 (57%), Gaps = 9/232 (3%)
Query: 84 IKITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLF 143
IKITL DG V E ++ T +IA IS SL AL + +NG ++ + D L++
Sbjct: 2 IKITLKDGKVLEVEKGLTVS-EIAARISTSLRKKALGAKINGEKAELMDVINEDSTLEIL 60
Query: 144 TFDSDEGRDTFWHSSAHILGQAIEQQY-GCKLCIGPCTTRGEGFYYDAFYGDLGLNPDHF 202
TF+ EG+DT H+++HIL QA+++ Y KL IGP G FYYD F + P+
Sbjct: 61 TFEDQEGKDTLRHTASHILAQAVKRLYPEVKLAIGPSIENG--FYYD-FDAEFSFTPEIL 117
Query: 203 KSIDSEADKAAKQPFE--RIEVTRDQALEMFSDNN--FKVEIINDLPADKTITVYRCGPL 258
+ I+ E +K K+ + + +R+ A+ + N +KVE+I DLP + I+ Y G
Sbjct: 118 EKIEKEMNKIVKENLQLKKFTKSREDAINFMKERNEDYKVELIEDLPEESIISFYEQGDF 177
Query: 259 VDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKDRESLQRVYGISYPDKKRLK 310
VDLC GPH+P+T VK L + AYWRGN++ + LQR+YG ++ K L+
Sbjct: 178 VDLCAGPHVPSTKEVKAIKLLSVAGAYWRGNENNKMLQRIYGTAFTKKAELE 229
>sp|Q60AZ3|SYT_METCA Threonine--tRNA ligase OS=Methylococcus capsulatus (strain ATCC
33009 / NCIMB 11132 / Bath) GN=thrS PE=3 SV=1
Length = 638
Score = 265 bits (678), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 139/320 (43%), Positives = 189/320 (59%), Gaps = 36/320 (11%)
Query: 312 AFAELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDY 371
++ +LPLRLA+FG HRNE SGAL GL RVR F QDDAHIFC E QI+DEV ++ +
Sbjct: 346 SYRDLPLRLAEFGSCHRNELSGALHGLMRVRGFTQDDAHIFCTEEQIQDEVSRFIDLLFK 405
Query: 372 AYRIFGFT-YELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKI 430
Y FGF+ ++KLSTRPEK +G W+KAE AL ALN G W + G+GAFYGPKI
Sbjct: 406 VYADFGFSEVQIKLSTRPEKRVGSDEVWDKAEHALETALNAKGLAWDLQPGEGAFYGPKI 465
Query: 431 DISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAIL 490
+ S+ D L R +QC T+Q+DF +PDR Y AED A+ PVM+HRAILGS+ER IL
Sbjct: 466 EFSLKDCLDRVWQCGTIQVDFSMPDRLGATYVAEDGAR-HVPVMLHRAILGSLERFVGIL 524
Query: 491 LEHYKGKWPFWLSPRQAIVCPVSEKSQPYALQVRDHIYRAGYYVDVDTTDRKIQKKPNSF 550
EHY G++P WL+P QA+V ++++ YA +V G+ V D + K+ K
Sbjct: 525 TEHYAGQYPLWLAPVQAVVLNITDRQADYAREVAQEFVSKGFRVIADLRNEKVGFK---- 580
Query: 551 VHARSTYIEVVFSCWEELVAGINIYPIRVSVREAQLAQYNFILVVGEEEAKSGQVSVRVR 610
+RE + + ++L+VG++E ++G VS+R R
Sbjct: 581 ------------------------------IREHSMQRVPYLLIVGDKEVEAGSVSLRTR 610
Query: 611 DQGDHSNMSIEDLLKHFKEK 630
D DH + I DL+ F E+
Sbjct: 611 DGKDHGSFGIGDLVAKFTEE 630
Score = 150 bits (379), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 83/229 (36%), Positives = 131/229 (57%), Gaps = 9/229 (3%)
Query: 86 ITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLFTF 145
+TLPDGS +E + + +A+ I LA AL V+G L D++ +EAD ++ L T
Sbjct: 4 VTLPDGSRREFDH-PVTLLQVAEAIGPGLAKAALAGRVDGRLVDLSHRIEADAEVALVTA 62
Query: 146 DSDEGRDTFWHSSAHILGQAIEQQY-GCKLCIGPCTTRGEGFYYDAFYGDLGLNPDHFKS 204
+G + HS+AH+L QA++ Y ++ IGP +GFYYD Y + P+ ++
Sbjct: 63 RDADGVEVIRHSTAHLLAQAVKALYPKAQVTIGPVIQ--DGFYYDFSY-ERPFTPEDLEA 119
Query: 205 IDSEADKAAKQ--PFERIEVTRDQALEMFSD--NNFKVEIINDLPADKTITVYRCGPLVD 260
I+++ + A Q P ER + R++A+ F +K EII +P + I++Y G D
Sbjct: 120 IEAKMHELAAQALPVERRTMPREEAIAYFRSLGEAYKAEIIEAIPRGEVISLYSQGDFTD 179
Query: 261 LCRGPHIPNTSFVKGFGCLKASSAYWRGNKDRESLQRVYGISYPDKKRL 309
LCRGPH+P+T + F +K + AYWRG+ E LQR+YG ++ D+K L
Sbjct: 180 LCRGPHVPDTGRLNAFKLMKIAGAYWRGDSRNEMLQRIYGTAWGDRKDL 228
>sp|C6DYJ5|SYT_GEOSM Threonine--tRNA ligase OS=Geobacter sp. (strain M21) GN=thrS PE=3
SV=1
Length = 636
Score = 265 bits (676), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 133/324 (41%), Positives = 196/324 (60%), Gaps = 35/324 (10%)
Query: 312 AFAELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDY 371
++ +LPLR + G +HR+E +G L GL RVR F QDDAHI C Q+ E++GV++F+
Sbjct: 348 SYRDLPLRYFELGTVHRHERAGVLHGLLRVRGFTQDDAHILCTPDQLDAEIKGVIQFVTE 407
Query: 372 AYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKID 431
IFGF +E++LSTRPEK +G WE A +AL AL + G+P++INEGDGAFYGPKID
Sbjct: 408 VMGIFGFEFEMELSTRPEKSIGSDDAWELATSALLNALKDSGRPYEINEGDGAFYGPKID 467
Query: 432 ISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILL 491
I + DAL R++QCAT+Q DF LP+RF+L Y D K +RPVM+HR ILG++ER +L+
Sbjct: 468 IKLRDALDRRWQCATIQCDFTLPERFDLTYVDADGEK-KRPVMVHRVILGAIERFIGVLI 526
Query: 492 EHYKGKWPFWLSPRQAIVCPVSEKSQPYALQVRDHIYRAGYYVDVDTTDRKIQKKPNSFV 551
EH+ G +P WL+P QA + V++ PYA D + AG V D + K+ K
Sbjct: 527 EHFAGNFPTWLAPVQATIVTVTDNQIPYAQAAFDKLRAAGIRVQKDFRNEKLGFK----- 581
Query: 552 HARSTYIEVVFSCWEELVAGINIYPIRVSVREAQLAQYNFILVVGEEEAKSGQVSVRVRD 611
+REAQL + ++LVVG++E +SG ++ R RD
Sbjct: 582 -----------------------------IREAQLQKIPYMLVVGDKEVESGMLAPRFRD 612
Query: 612 QGDHSNMSIEDLLKHFKEKLEAFQ 635
+ +M+ E + + ++++++
Sbjct: 613 GKNLESMTPEQFITFIENEVKSYK 636
Score = 149 bits (376), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 89/238 (37%), Positives = 132/238 (55%), Gaps = 10/238 (4%)
Query: 84 IKITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLF 143
I +TLPDGS + S D+A I LA A+ ++G L D+ PL +++
Sbjct: 4 INVTLPDGSQRPLPAG-ASIFDLAASIGAGLAKAAIAGKIDGNLVDLNTPLADGARVEIV 62
Query: 144 TFDSDEGRDTFWHSSAHILGQAIEQQY-GCKLCIGPCTTRGEGFYYDAFYGDLGLNPDHF 202
T S E + HS++H++ QA++ + K+ IGP GFYYD F D P+
Sbjct: 63 TEKSPEALEIIRHSTSHLMAQAVKALFPQAKVTIGPAIE--TGFYYD-FDVDHPFTPEDL 119
Query: 203 KSIDSEADKAAKQPF--ERIEVTRDQALEMFSD--NNFKVEIINDLPADKTITVYRCGPL 258
+ I+ + + AK ER E+T A+ +F ++KVE+I DL ADK +++Y G
Sbjct: 120 EKIEEKMRELAKADLKIERRELTSADAIALFKGMGEDYKVELIEDLGADK-VSLYSQGDF 178
Query: 259 VDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKDRESLQRVYGISYPDKKRLKHAFAEL 316
VDLCRGPH+P TS++K F + AYWRG++ R LQRVYG ++ DKK L+ A +
Sbjct: 179 VDLCRGPHLPKTSYIKAFKLTSIAGAYWRGDEKRAMLQRVYGTAFGDKKELEAYLARI 236
>sp|Q1D6E3|SYT_MYXXD Threonine--tRNA ligase OS=Myxococcus xanthus (strain DK 1622)
GN=thrS PE=3 SV=1
Length = 642
Score = 265 bits (676), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 137/314 (43%), Positives = 187/314 (59%), Gaps = 35/314 (11%)
Query: 310 KHAFAELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFI 369
KH++ +LPLR VLHRNEA+G+L GLTRVR+F QDDAHI+C E+QI DEVR ++ +
Sbjct: 353 KHSYRDLPLRYHTQDVLHRNEAAGSLGGLTRVRQFAQDDAHIYCTEAQITDEVRRFVKLL 412
Query: 370 DYAYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPK 429
D+ Y+ G TY +KLSTRPE+ LGD + W++AE L AL G +++ GDGAFYGPK
Sbjct: 413 DHVYKAVGLTYAVKLSTRPEQRLGDDSLWDRAEGGLKAALESLGLEYELAPGDGAFYGPK 472
Query: 430 IDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAI 489
ID +VSD++ R++Q T+QLD+ P+RF+L Y ED A+ RPV++HRAI GS ER AI
Sbjct: 473 IDFAVSDSIGRRWQLGTMQLDYLAPERFDLTYVGEDNAE-HRPVVLHRAIFGSFERFTAI 531
Query: 490 LLEHYKGKWPFWLSPRQAIVCPVSEKSQPYALQVRDHIYRAGYYVDVDTTDRKIQKKPNS 549
L+EH+ G +P WL+P QA++ V+++ YA +VRD + GY V+ D + K
Sbjct: 532 LIEHFAGAFPAWLAPIQAVLVTVADRQNDYARKVRDSLRAKGYRVEFDERGLSMNAK--- 588
Query: 550 FVHARSTYIEVVFSCWEELVAGINIYPIRVSVREAQLAQYNFILVVGEEEAKSGQVSVRV 609
+REAQL + F LVVG+ E VS R
Sbjct: 589 -------------------------------IREAQLQKVPFTLVVGDNEVSGEGVSPRR 617
Query: 610 RDQGDHSNMSIEDL 623
D M + D
Sbjct: 618 YGGEDLKTMKVTDF 631
Score = 159 bits (403), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 92/235 (39%), Positives = 136/235 (57%), Gaps = 10/235 (4%)
Query: 82 DPIKITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLK 141
D I +TLPDGS K+ R T + + I LA AL + VNG D+ R L+ D L+
Sbjct: 3 DIITVTLPDGSQKQTARGTTIADFVRESIGPGLAKAALFARVNGQDMDLARKLDEDVKLQ 62
Query: 142 LFTFDSDEGRDTFWHSSAHILGQAIEQQY-GCKLCIGPCTTRGEGFYYDAFYGDLGLNPD 200
+FT S E + H +AH++ A+++ + G ++ IGP T EGFYYD F+ + P+
Sbjct: 63 IFTPKSPESLELIRHDAAHVVASAVQKLFPGTQVTIGPATE--EGFYYD-FFREKPFTPE 119
Query: 201 HFKSIDSEADKAAKQ--PFERIEVTRDQALEMFSDNN--FKVEIINDLPAD--KTITVYR 254
+ I++EA+ K+ F R E++ D+A+ +F + FKVEI+ D+ A KT+T+Y
Sbjct: 120 DLEKIEAEANAELKRDMAFVRTEISMDEAVRLFEEKGEKFKVEIVKDIAAKGAKTLTLYT 179
Query: 255 CGPLVDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKDRESLQRVYGISYPDKKRL 309
G VD C GPH P+T + L +S AYWRG+ LQRVYG ++ DKK+L
Sbjct: 180 HGDWVDFCLGPHAPSTGKIGIIKILSSSGAYWRGDHRNPMLQRVYGTAFFDKKQL 234
>sp|Q3A4P3|SYT_PELCD Threonine--tRNA ligase OS=Pelobacter carbinolicus (strain DSM 2380
/ Gra Bd 1) GN=thrS PE=3 SV=1
Length = 638
Score = 265 bits (676), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 149/387 (38%), Positives = 208/387 (53%), Gaps = 53/387 (13%)
Query: 260 DLCRGPHIPNTSFVKGFGCLKASSAYWRGNKDRESLQRVYGISYPDK-----------KR 308
D+ GP I T K +S ++ ++ V G Y K K
Sbjct: 294 DIVMGPQILRTDLWK-------TSGHFDNYRENMYFTDVDGQGYGIKPMNCLAHMLIYKA 346
Query: 309 LKHAFAELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEF 368
+ ++ +LPLR + G +HR+E SG L GL RVR F QDDAHI C Q+ +E++ VLEF
Sbjct: 347 RQRSYRDLPLRYFELGTVHRHEKSGVLHGLLRVRGFTQDDAHIICTPDQLDEEIKRVLEF 406
Query: 369 IDYAYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGP 428
+ IFGF YE+++STRPEK +G A WE+A AL AL + P +NEGDGAFYGP
Sbjct: 407 VRDVMAIFGFEYEIEISTRPEKSIGSDADWERATGALMNALKDLELPHDVNEGDGAFYGP 466
Query: 429 KIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFA 488
KIDI + DAL R++QCAT+Q DF LP+RF+L Y +D K RPVM+HR ILG++ER
Sbjct: 467 KIDIKLKDALDRRWQCATIQCDFTLPERFDLTYVGKDGEK-HRPVMLHRVILGAIERFIG 525
Query: 489 ILLEHYKGKWPFWLSPRQAIVCPVSEKSQPYALQVRDHIYRAGYYVDVDTTDRKIQKKPN 548
+L+EHY G +P WL+P QA+V V++ YA V D + AG V D + K+ K
Sbjct: 526 VLIEHYAGNFPLWLAPVQAVVINVTDNQADYAKSVSDALRAAGVRVQCDLRNEKLGFK-- 583
Query: 549 SFVHARSTYIEVVFSCWEELVAGINIYPIRVSVREAQLAQYNFILVVGEEEAKSGQVSVR 608
+REAQ+ + ++LVVG+ E G V+ R
Sbjct: 584 --------------------------------IREAQVDKIPYMLVVGDTEMSDGTVAPR 611
Query: 609 VRDQGDHSNMSIEDLLKHFKEKLEAFQ 635
R + MS ED + +E+ + ++
Sbjct: 612 FRSGKNLEPMSPEDFARFVQEECDQYR 638
Score = 176 bits (445), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 93/239 (38%), Positives = 141/239 (58%), Gaps = 10/239 (4%)
Query: 84 IKITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLF 143
I+I LPDGS+KE T+P DIA GI LA A+ + N + D+ P+ L++
Sbjct: 4 IQIELPDGSIKEFSE-TTTPGDIAAGIGSGLARQAVAARFNDRMVDLCTPITESGRLEII 62
Query: 144 TFDSDEGRDTFWHSSAHILGQAIEQQYG--CKLCIGPCTTRGEGFYYDAFYGDLGLNPDH 201
T +S +G + + H++AH++ A++ YG ++ IGP GFYYD + D +PD
Sbjct: 63 TLNSPQGLEVYRHTAAHLMAHAVKDLYGDRVQVTIGPAVE--NGFYYDFYCEDHAFSPDD 120
Query: 202 FKSIDSEADKAAKQ--PFERIEVTRDQALEMFSD--NNFKVEIINDLPADKTITVYRCGP 257
F+ I+ + K P ER EV+RD A+ +F + ++KVE+I DL A T+++YR G
Sbjct: 121 FEKIEKRMQELVKANLPIEREEVSRDSAIALFRELGEHYKVELIEDLDA-PTVSLYRQGD 179
Query: 258 LVDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKDRESLQRVYGISYPDKKRLKHAFAEL 316
VDLCRGPH+P+T +K F + AYWRG++ LQR+Y ++PDKK L+ +L
Sbjct: 180 FVDLCRGPHLPSTGRIKAFKLTSVAGAYWRGSEKNAMLQRIYATAFPDKKELRTYLNKL 238
>sp|P18256|SYT2_BACSU Threonine--tRNA ligase 2 OS=Bacillus subtilis (strain 168) GN=thrZ
PE=2 SV=2
Length = 638
Score = 264 bits (674), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 131/298 (43%), Positives = 182/298 (61%), Gaps = 35/298 (11%)
Query: 311 HAFAELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFID 370
+++ +LP+R+A+FG +HR+E SGAL G+ RVR F QDDAHIF RE QI+ E++ + ID
Sbjct: 348 YSYRDLPIRMAEFGQVHRHEYSGALNGMLRVRTFCQDDAHIFVREDQIESEIKEAIRLID 407
Query: 371 YAYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKI 430
YR FGF Y ++LSTRPE LGD + WE +E AL L E G ++INEGDGAFYGPKI
Sbjct: 408 EVYRTFGFEYSVELSTRPEDSLGDDSLWEASERALARVLEELGLSYEINEGDGAFYGPKI 467
Query: 431 DISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAIL 490
D + DALKR QCAT+QLDFQ+P++F+L Y E K RPV+IHRA+ GS++R F IL
Sbjct: 468 DFHIKDALKRSHQCATIQLDFQMPEKFDLTYINELNEKV-RPVVIHRAVFGSIDRFFGIL 526
Query: 491 LEHYKGKWPFWLSPRQAIVCPVSEKSQPYALQVRDHIYRAGYYVDVDTTDRKIQKKPNSF 550
+EHY G +P WL+P Q + PVS Y +V+ + +AG +D + K+ K
Sbjct: 527 IEHYGGAFPVWLAPIQVQIIPVSHVHLDYCRKVQAELKQAGIRAGIDERNEKLGYK---- 582
Query: 551 VHARSTYIEVVFSCWEELVAGINIYPIRVSVREAQLAQYNFILVVGEEEAKSGQVSVR 608
+RE+Q+ + ++LV+G+ E + V+VR
Sbjct: 583 ------------------------------IRESQVQKIPYVLVLGDHEEQENAVNVR 610
Score = 169 bits (429), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 93/231 (40%), Positives = 133/231 (57%), Gaps = 9/231 (3%)
Query: 84 IKITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLF 143
+ I LPDG ++E + T + A IS SL A VNG L D++ LE D +L +
Sbjct: 5 VHIQLPDGQIQEYPKGITIK-EAAGSISSSLQKKAAAGQVNGKLVDLSFKLEEDAELSIV 63
Query: 144 TFDSDEGRDTFWHSSAHILGQAIEQQYG-CKLCIGPCTTRGEGFYYDAFYGDLGLNPDHF 202
T DS EG H++AH+L QA+++ YG L +GP +GFYYD G L
Sbjct: 64 TLDSQEGLQVLRHTTAHVLAQAVKRLYGEVSLGVGPVIL--DGFYYDMKLGK-SLASGDL 120
Query: 203 KSIDSEADKAAKQPFE--RIEVTRDQALEMFS--DNNFKVEIINDLPADKTITVYRCGPL 258
++I+ E + E RIEV+ ++A E+F+ D K+EI+ D+P + IT+Y+ G
Sbjct: 121 EAIEKEMKNIINENLEIKRIEVSYEEAEELFAQKDERLKLEILKDIPRGEDITLYQQGEF 180
Query: 259 VDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKDRESLQRVYGISYPDKKRL 309
VDLCRGPH+P+T +K F + S AYWRG+ E LQRVYG+++ KK L
Sbjct: 181 VDLCRGPHLPSTGMIKAFKLTRVSGAYWRGDSKNEVLQRVYGVAFQKKKDL 231
>sp|Q8R9A4|SYT_THETN Threonine--tRNA ligase OS=Thermoanaerobacter tengcongensis (strain
DSM 15242 / JCM 11007 / NBRC 100824 / MB4) GN=thrS PE=3
SV=1
Length = 644
Score = 264 bits (674), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 138/354 (38%), Positives = 197/354 (55%), Gaps = 46/354 (12%)
Query: 283 SAYWRGNKDRESLQRVYGISYPDK-----------KRLKHAFAELPLRLADFGVLHRNEA 331
S +W K+ + G +Y K K ++ +LPLRL + G++HR+E
Sbjct: 315 SGHWDHYKENMYFTEIDGQTYAIKPMNCPGAMLVYKSTLRSYRDLPLRLCELGLVHRHEL 374
Query: 332 SGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFTYELKLSTRPEKY 391
SG L GL RVR F QDDAH+F Q++DE+ GV+ +DY Y+IFGF Y ++LSTRPE
Sbjct: 375 SGVLHGLMRVRSFTQDDAHLFMTPEQVEDEILGVINLVDYFYKIFGFEYHVELSTRPENS 434
Query: 392 LGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDF 451
+G WE A AL AL P+++NEG+GAFYGPKID + D++ R +QC T+QLDF
Sbjct: 435 MGTDEEWELATNALISALKRANLPYKVNEGEGAFYGPKIDFHLKDSIGRTWQCGTIQLDF 494
Query: 452 QLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCP 511
Q+P+RF L Y D K RP+M+HR I GS+ER IL EH+ G +P WL+P Q V P
Sbjct: 495 QMPERFELEYIGPDGEK-HRPIMLHRVIYGSIERFIGILTEHFAGAFPTWLAPVQVRVLP 553
Query: 512 VSEKSQPYALQVRDHIYRAGYYVDVDTTDRKIQKKPNSFVHARSTYIEVVFSCWEELVAG 571
+SEK YA +V + + V++D + KI K
Sbjct: 554 ISEKHHEYARKVYERLQEHDIRVELDDRNEKIGYK------------------------- 588
Query: 572 INIYPIRVSVREAQLAQYNFILVVGEEEAKSGQVSVRVRDQGDHSNMSIEDLLK 625
+REAQL + ++L+VG+ E + G VS+R R GD +S+++ ++
Sbjct: 589 ---------IREAQLQKIPYMLIVGDREVEEGNVSLRSRKDGDLGPISLDNFIE 633
Score = 148 bits (373), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/229 (37%), Positives = 140/229 (61%), Gaps = 9/229 (3%)
Query: 86 ITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLFTF 145
ITL DG+ +E ++ T +IA+ IS LA A+ NG + ++ +E D +L++ TF
Sbjct: 13 ITLRDGTKREFEKGITV-YEIAKSISDKLAREAVGGKFNGKIVELNTKIEEDGELEILTF 71
Query: 146 DSDEGRDTFWHSSAHILGQAIEQQY-GCKLCIGPCTTRGEGFYYDAFYGDLGLNPDHFKS 204
+ +EG+ +WH+S+HIL QA+++ + KL IGP G FYYD F + + F++
Sbjct: 72 EDEEGKKIYWHTSSHILAQAVKRLFKDVKLAIGPAIDNG--FYYD-FDTERPFTTEDFEA 128
Query: 205 IDSEADKAAKQPF--ERIEVTRDQALEMFS--DNNFKVEIINDLPADKTITVYRCGPLVD 260
I+ E +K K+ + ER +++++A++ D +KVE+I ++P + I+ Y+ G VD
Sbjct: 129 IEEEMNKIIKEDYKLERFVLSKEEAIKFMKEKDEPYKVELIEEIPEGEEISFYKQGEFVD 188
Query: 261 LCRGPHIPNTSFVKGFGCLKASSAYWRGNKDRESLQRVYGISYPDKKRL 309
LC GPH+P+T VK L + AYW+G++ + LQR+YGIS+P K L
Sbjct: 189 LCAGPHLPSTGMVKAIKLLSVAGAYWKGDEKNKMLQRIYGISFPKKSML 237
>sp|B5EBX9|SYT_GEOBB Threonine--tRNA ligase OS=Geobacter bemidjiensis (strain Bem / ATCC
BAA-1014 / DSM 16622) GN=thrS PE=3 SV=1
Length = 636
Score = 263 bits (673), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 133/324 (41%), Positives = 195/324 (60%), Gaps = 35/324 (10%)
Query: 312 AFAELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDY 371
++ +LPLR + G +HR+E +G L GL RVR F QDDAHI C Q+ E++GV++F+
Sbjct: 348 SYRDLPLRYFELGTVHRHERAGVLHGLLRVRGFTQDDAHILCTPEQLDAEIKGVIQFVTE 407
Query: 372 AYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKID 431
IFGF +E++LSTRPEK +G WE A AL AL + G+P++INEGDGAFYGPKID
Sbjct: 408 VMGIFGFEFEMELSTRPEKSIGSDDAWELATNALLNALKDSGRPYEINEGDGAFYGPKID 467
Query: 432 ISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILL 491
I + DAL R++QCAT+Q DF LP+RF+L Y D K +RPVM+HR ILG++ER +L+
Sbjct: 468 IKLRDALDRRWQCATIQCDFTLPERFDLTYVDADGEK-KRPVMVHRVILGAIERFIGVLI 526
Query: 492 EHYKGKWPFWLSPRQAIVCPVSEKSQPYALQVRDHIYRAGYYVDVDTTDRKIQKKPNSFV 551
EH+ G +P WL+P QA + V++ PYA D + AG V D + K+ K
Sbjct: 527 EHFAGNFPTWLAPVQATIVTVTDNQIPYAQAAFDKLRAAGIRVQKDFRNEKLGFK----- 581
Query: 552 HARSTYIEVVFSCWEELVAGINIYPIRVSVREAQLAQYNFILVVGEEEAKSGQVSVRVRD 611
+REAQL + ++LVVG++E +SG ++ R RD
Sbjct: 582 -----------------------------IREAQLQKIPYMLVVGDKEVESGMLAPRFRD 612
Query: 612 QGDHSNMSIEDLLKHFKEKLEAFQ 635
+ +M+ E + + ++++++
Sbjct: 613 GKNLESMTPEQFVSFIESEVKSYK 636
Score = 152 bits (385), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 91/238 (38%), Positives = 132/238 (55%), Gaps = 10/238 (4%)
Query: 84 IKITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLF 143
I +TLPDGS + S D+A I LA A+ ++G L D+ PL +++
Sbjct: 4 INVTLPDGSQRPLPAG-ASIFDLAASIGAGLAKAAIAGKIDGNLVDLNTPLADGARVEII 62
Query: 144 TFDSDEGRDTFWHSSAHILGQAIEQQY-GCKLCIGPCTTRGEGFYYDAFYGDLGLNPDHF 202
T S E + HS++H++ QA++ + K+ IGP GFYYD F D P+
Sbjct: 63 TEKSPEALEIIRHSTSHLMAQAVKALFPQAKVTIGPAIE--TGFYYD-FDVDHPFTPEDL 119
Query: 203 KSIDSEADKAAKQPF--ERIEVTRDQALEMFSD--NNFKVEIINDLPADKTITVYRCGPL 258
+ I+ + + AK ER E+T A+ +F N+KVE+I DL ADK +++Y G
Sbjct: 120 EKIEEKMRELAKADLKIERKELTSADAIALFKGMGENYKVELIEDLGADK-VSLYSQGDF 178
Query: 259 VDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKDRESLQRVYGISYPDKKRLKHAFAEL 316
VDLCRGPH+P TSF+K F + AYWRG++ R LQRVYG ++ DKK L+ A +
Sbjct: 179 VDLCRGPHLPKTSFIKAFKLTSIAGAYWRGDEKRPMLQRVYGTAFGDKKELEAYLARI 236
>sp|C5CI64|SYT_KOSOT Threonine--tRNA ligase OS=Kosmotoga olearia (strain TBF 19.5.1)
GN=thrS PE=3 SV=1
Length = 648
Score = 263 bits (672), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 132/320 (41%), Positives = 190/320 (59%), Gaps = 35/320 (10%)
Query: 312 AFAELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDY 371
++ +LPL+L +FG +HR E SG L GL RVR F QDDAHIFC Q+K++++ V+ F+D
Sbjct: 350 SYRDLPLKLFEFGKVHRYERSGVLHGLLRVRGFIQDDAHIFCTREQLKEQLKDVIRFVDM 409
Query: 372 AYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKID 431
Y FGF Y L TRPE ++GD+ W+ A AL +A+ G +++NEGDGAFYGPKID
Sbjct: 410 IYTPFGFEYRADLCTRPEDFMGDVEIWDLATEALKDAIESIGLEYKVNEGDGAFYGPKID 469
Query: 432 ISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILL 491
V+D++ R++QCAT+QLDF +P+RF L Y D K RPVMIHRAI GS++R F IL+
Sbjct: 470 FHVTDSIGREWQCATIQLDFMMPERFELTYVGPDN-KEYRPVMIHRAIYGSLDRFFGILI 528
Query: 492 EHYKGKWPFWLSPRQAIVCPVSEKSQPYALQVRDHIYRAGYYVDVDTTDRKIQKKPNSFV 551
EHY G +P WL+P Q + P+S+K YA +V D + G VDVD + K
Sbjct: 529 EHYAGAFPTWLAPVQVVAIPISDKHVDYAREVADALAAEGVRVDVDEKQKSTNYK----- 583
Query: 552 HARSTYIEVVFSCWEELVAGINIYPIRVSVREAQLAQYNFILVVGEEEAKSGQVSVRVRD 611
+REAQL + ++L++G++E +S ++VR+R
Sbjct: 584 -----------------------------IREAQLNKIPYMLILGDKEKESETITVRLRT 614
Query: 612 QGDHSNMSIEDLLKHFKEKL 631
+ M + + KE++
Sbjct: 615 GKNIYGMKLAEFSAKLKEEI 634
Score = 157 bits (398), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 97/233 (41%), Positives = 135/233 (57%), Gaps = 11/233 (4%)
Query: 85 KITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLFT 144
KI LPDGS+KE T+ D+A +S +LA A+ VNG LWD+TR L +C + L
Sbjct: 4 KIELPDGSIKEYDHPVTAA-DVAADLSPALAKRAIGVEVNGELWDLTRELPEECKINLIL 62
Query: 145 FDSDEGRDTFWHSSAHILGQAIEQQYG---CKLCIGPCTTRGEGFYYDAFYGDLGLNPDH 201
+ F H+ +HIL QA+ + YG KL IGP G FYYD GD+ L +
Sbjct: 63 EKDPRAPEFFRHTFSHILAQAVMRIYGSDKVKLGIGPVIENG--FYYDFDLGDIRLTEED 120
Query: 202 FKSIDSEADKAAKQ--PFERIEVTRDQALEMFSDNN--FKVEIINDLPADKTITVYRCGP 257
I+ E +K K+ ER E+ +++A+++ D N +KVE+I DL +D T YR G
Sbjct: 121 LPKIEEEMEKIIKEDLKLERFELPKEEAIKLMKDQNQPYKVELIEDLESD-VATFYRQGE 179
Query: 258 LVDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKDRESLQRVYGISYPDKKRLK 310
VDLCRGPH+P+T VK F L S AYWRG++ + LQR+YG ++ K L+
Sbjct: 180 FVDLCRGPHMPSTGKVKYFKLLSVSGAYWRGDERNKMLQRIYGTAFAKKSELE 232
>sp|Q67LA3|SYT_SYMTH Threonine--tRNA ligase OS=Symbiobacterium thermophilum (strain T /
IAM 14863) GN=thrS PE=3 SV=1
Length = 651
Score = 263 bits (671), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 141/313 (45%), Positives = 195/313 (62%), Gaps = 35/313 (11%)
Query: 312 AFAELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDY 371
++ +LPL++A++G L R EASG L GL RVR F QDDAH+F R QI++++R V+ +D
Sbjct: 349 SYRDLPLKIAEYGPLSRFEASGTLHGLLRVRGFHQDDAHLFVRPDQIEEQIREVIGLVDT 408
Query: 372 AYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKID 431
Y G YE+KLSTRPE ++GD+ W +AEAAL AL+ G+ +++N GDGAFYGPK+D
Sbjct: 409 IYGTLGLEYEIKLSTRPEDFMGDIELWNEAEAALARALDGMGRSYKLNPGDGAFYGPKLD 468
Query: 432 ISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILL 491
V+DAL RK+QCAT+QLDFQLP +F+L Y ED K RPVMIHRAI+G++ER IL
Sbjct: 469 FDVTDALGRKWQCATVQLDFQLPIKFDLTYIGED-GKEHRPVMIHRAIMGTLERFIGILT 527
Query: 492 EHYKGKWPFWLSPRQAIVCPVSEKSQPYALQVRDHIYRAGYYVDVDTTDRKIQKKPNSFV 551
EHY G +P W++P QA V P++++ YA +V + AG V+ D + K+ K
Sbjct: 528 EHYAGNFPLWMAPVQARVLPITDRHHAYAGEVVAKLQEAGLRVEGDYRNEKVGYK----- 582
Query: 552 HARSTYIEVVFSCWEELVAGINIYPIRVSVREAQLAQYNFILVVGEEEAKSGQVSVRVRD 611
+REA+L + FILVVG++EA++G V+VR R
Sbjct: 583 -----------------------------IREAELLKIPFILVVGDKEAEAGAVAVRRRG 613
Query: 612 QGDHSNMSIEDLL 624
D M + D L
Sbjct: 614 MKDLGPMPLADFL 626
Score = 154 bits (390), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 92/232 (39%), Positives = 137/232 (59%), Gaps = 9/232 (3%)
Query: 84 IKITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLF 143
+ +TLPDGSV+E + T +AQ I LA AL + V+G L D++ LE DC L++
Sbjct: 5 VHVTLPDGSVREYPQGITIAEAVAQ-IGPRLAKAALAAKVDGRLVDLSARLEKDCTLQVL 63
Query: 144 TFDSDEGRDTFWHSSAHILGQAIEQQYG-CKLCIGPCTTRGEGFYYDAFYGDLGLNPDHF 202
TF +EGR+ F H+S HI+ QA+++ + KL +GP FYYD F L P+
Sbjct: 64 TFKDEEGREVFRHTSTHIMAQAVKRLFPEAKLTVGPPLE--NSFYYD-FDLPRPLTPEDL 120
Query: 203 KSIDSEADK--AAKQPFERIEVTRDQALEMFSD--NNFKVEIINDLPADKTITVYRCGPL 258
+ I++E K A P R EV R++A F++ ++KV +++ +P D+ +++Y G
Sbjct: 121 EKIEAEMAKIVEADYPIVRQEVDREEAKRFFAERGEDYKVLLVDKIPEDEVVSIYTQGEF 180
Query: 259 VDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKDRESLQRVYGISYPDKKRLK 310
DLC GPH+P+T VK F L + AYW GN+ + LQRVYG S+ KK L+
Sbjct: 181 TDLCVGPHLPSTGRVKAFKLLSVAGAYWEGNQANKQLQRVYGTSFESKKDLE 232
>sp|B8FN26|SYT_DESAA Threonine--tRNA ligase OS=Desulfatibacillum alkenivorans (strain
AK-01) GN=thrS PE=3 SV=1
Length = 636
Score = 261 bits (668), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 133/314 (42%), Positives = 186/314 (59%), Gaps = 35/314 (11%)
Query: 311 HAFAELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFID 370
H++ +LP+R + G++HR+E SG L+GL RVR F QDDAHIF E I+DE+ GVL+ ++
Sbjct: 341 HSYNDLPIRAGEIGLVHRHELSGVLSGLFRVRAFHQDDAHIFMTEEMIEDEILGVLQLVE 400
Query: 371 YAYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKI 430
Y FG + L+LSTRPEK +G WEKA L AL++ G+ ++INEGDGAFYGPKI
Sbjct: 401 RMYSTFGLGFHLELSTRPEKTIGTDEQWEKATEGLRAALDKSGRDYKINEGDGAFYGPKI 460
Query: 431 DISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAIL 490
DI + DAL R +QC T+QLD LP+RF+L Y D + RPVMIHR I GS+ER IL
Sbjct: 461 DIHIKDALGRTWQCGTIQLDMNLPERFDLTYVGADNQR-HRPVMIHRVIYGSIERFLGIL 519
Query: 491 LEHYKGKWPFWLSPRQAIVCPVSEKSQPYALQVRDHIYRAGYYVDVDTTDRKIQKKPNSF 550
+EHY GK+P WLSP QA+V +++ YA +V+ + AG +++D I KK
Sbjct: 520 IEHYAGKFPLWLSPCQAVVLAMNDDVAGYAKEVKARLEEAGLRMEIDLRAESINKK---- 575
Query: 551 VHARSTYIEVVFSCWEELVAGINIYPIRVSVREAQLAQYNFILVVGEEEAKSGQVSVRVR 610
VR+AQL++ +L VG +E + ++VR
Sbjct: 576 ------------------------------VRDAQLSKIPLMLTVGGKEEAAQTLAVRTL 605
Query: 611 DQGDHSNMSIEDLL 624
D ++I++ L
Sbjct: 606 DGKVKYGVTIDNFL 619
Score = 177 bits (449), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 98/231 (42%), Positives = 139/231 (60%), Gaps = 11/231 (4%)
Query: 84 IKITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLF 143
I ITLPDG + E S D+A+GIS+ A N + V+G L D++ P+E D +
Sbjct: 2 INITLPDGKIVESDG-PVSGEDVAKGISEGFARNCVAVEVDGKLTDLSTPIETDASVVFI 60
Query: 144 TFDSDEGRDTFWHSSAHILGQAIEQQY-GCKLCIGPCTTRGEGFYYDAFYGDLG-LNPDH 201
T ++G D HS+AH++ +AI Y KL IGP +GFYYD D+ ++ D
Sbjct: 61 TTKDEQGLDIMRHSAAHVMAEAILNLYPDAKLTIGPVIE--DGFYYDI---DMPPISEDD 115
Query: 202 FKSIDSEADK--AAKQPFERIEVTRDQALEMFSDNNFKVEIINDLPADKTITVYRCGPLV 259
F I+ E +K AK+PF R +++ +AL+ + DN FK E+I++L D TI++Y G
Sbjct: 116 FPKIEQEINKIIKAKKPFVRKTLSKAEALDFYKDNAFKTELISEL-EDGTISIYEQGGFT 174
Query: 260 DLCRGPHIPNTSFVKGFGCLKASSAYWRGNKDRESLQRVYGISYPDKKRLK 310
DLCRGPH+PNT VK +K S AYWRG+ +R LQR+YG ++ DKK LK
Sbjct: 175 DLCRGPHVPNTGLVKTLKLMKVSGAYWRGDSERPMLQRLYGTAFFDKKELK 225
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.137 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 235,433,028
Number of Sequences: 539616
Number of extensions: 10059488
Number of successful extensions: 28932
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 713
Number of HSP's successfully gapped in prelim test: 53
Number of HSP's that attempted gapping in prelim test: 24210
Number of HSP's gapped (non-prelim): 2201
length of query: 635
length of database: 191,569,459
effective HSP length: 124
effective length of query: 511
effective length of database: 124,657,075
effective search space: 63699765325
effective search space used: 63699765325
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)