BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 006686
         (635 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|224131084|ref|XP_002320997.1| predicted protein [Populus trichocarpa]
 gi|222861770|gb|EEE99312.1| predicted protein [Populus trichocarpa]
          Length = 892

 Score = 1102 bits (2851), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 545/640 (85%), Positives = 575/640 (89%), Gaps = 15/640 (2%)

Query: 1   MASAASMSVSVECVNICKL-PKGDGSGRYYDCSVLSCAWKAPRALTGFLASTTHPA-HSS 58
           MASA+S+SV VEC+NICKL  KGDGSGRY +CSVLSCAWKAPR LTGFLAST HP+   S
Sbjct: 1   MASASSLSVPVECLNICKLLSKGDGSGRY-ECSVLSCAWKAPRVLTGFLASTAHPSPQCS 59

Query: 59  SLSLGPTGRRNRINSRCEAFDVGS-WCTEGSDLVLLGKLPRSSLLHVACKRWRLCLSPSV 117
           S   G  GRR +  SRC+AFD G  + +E SD  LLG+  +S L HVA K+W+L  S S+
Sbjct: 60  SFLCGRNGRRKQFKSRCKAFDTGGCYSSEDSDFALLGRFFKSRLHHVAGKKWQLSSSSSI 119

Query: 118 SSDAFKEDSPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVE 177
           S+D F E SPERLWEDL+PT+SYLSP ELELV +AL LAFEAHDGQKRRSGEPFIIHPVE
Sbjct: 120 SADTFNEVSPERLWEDLKPTVSYLSPKELELVHKALKLAFEAHDGQKRRSGEPFIIHPVE 179

Query: 178 VARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLK 237
           VARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFG  VR IVEGETKVSKLGKLK
Sbjct: 180 VARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGPIVRHIVEGETKVSKLGKLK 239

Query: 238 CKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETL 297
           CKNEN SVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMP HKQSSIA ETL
Sbjct: 240 CKNENESVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPLHKQSSIAMETL 299

Query: 298 QVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKK 357
           QVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKIL KK
Sbjct: 300 QVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILKKK 359

Query: 358 IEDDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGP 417
           IE+DQFLDL+TVKT++R+VCKEPYSIY+AVLKS+GSINEVNQIAQLRIII+PKPC G GP
Sbjct: 360 IEEDQFLDLLTVKTDVRAVCKEPYSIYRAVLKSKGSINEVNQIAQLRIIIQPKPCIGAGP 419

Query: 418 LCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQI 477
           LCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTT+IPFLYESMFRLEVQI
Sbjct: 420 LCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTVIPFLYESMFRLEVQI 479

Query: 478 RTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIR 537
           RTEEMDLIAERGIAAHYSGRVFVTGLVGHA PNGRS RGK VCLNNANIALRI WLNAIR
Sbjct: 480 RTEEMDLIAERGIAAHYSGRVFVTGLVGHAMPNGRSTRGKAVCLNNANIALRIGWLNAIR 539

Query: 538 EWQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGE-----------IKNLPKGATVVDY 586
           EWQEEFVGNM+SREFV+TITRDLLGS VFVFTPRGE           IKNLPKGAT +DY
Sbjct: 540 EWQEEFVGNMSSREFVETITRDLLGSCVFVFTPRGEFWILIFDDMVQIKNLPKGATAIDY 599

Query: 587 AYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITYN 626
           AYMIHTEIGNKMVAAKVNGNLVSP HVLANAEVVEIITYN
Sbjct: 600 AYMIHTEIGNKMVAAKVNGNLVSPMHVLANAEVVEIITYN 639


>gi|297743917|emb|CBI36887.3| unnamed protein product [Vitis vinifera]
          Length = 883

 Score = 1082 bits (2797), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 536/627 (85%), Positives = 562/627 (89%), Gaps = 3/627 (0%)

Query: 1   MASAASMSVSVECVNICKLPKGDGSGRYYDCSVLSCAWKAPRALTGFLASTTHPAHSSSL 60
           MASA SMSVSVECVNICK  KGDGS R+ DCSVLSCAWKAPR L+GFLAST H    S  
Sbjct: 1   MASAPSMSVSVECVNICKFSKGDGSVRH-DCSVLSCAWKAPRVLSGFLASTAHSPQCSLS 59

Query: 61  SLGPTGRRNRINSRCEAFDVGSWCT-EGSDLVLLGKLPRSSLLHVACKRWRLCLSPSVSS 119
           S   +G RNRI  R EA DVG W + E SD VL  +L RS+L HVA +RW+   S S SS
Sbjct: 60  SCAGSGGRNRIKYRYEAHDVGGWHSHEASDFVLPERLIRSNLFHVASRRWKSSCSSSFSS 119

Query: 120 DAFKEDSPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVA 179
            AF + SPE LWEDL+P ISYL P ELELV  AL LAFEAHDGQKRRSGEPFIIHPVEVA
Sbjct: 120 VAFDKVSPESLWEDLKPAISYLPPQELELVHNALKLAFEAHDGQKRRSGEPFIIHPVEVA 179

Query: 180 RILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCK 239
           RILGELELDWESIAAGLLHDTVEDTNVVTF+ +E EFGATVR IVEGETKVSKLGKLK K
Sbjct: 180 RILGELELDWESIAAGLLHDTVEDTNVVTFDSLEREFGATVRHIVEGETKVSKLGKLKRK 239

Query: 240 NENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQV 299
           NEN SVQDVKADDLRQMFLAMT+EVRVIIVKLADRLHNMRTLSHMPPHKQ SIATETLQV
Sbjct: 240 NENDSVQDVKADDLRQMFLAMTQEVRVIIVKLADRLHNMRTLSHMPPHKQVSIATETLQV 299

Query: 300 FAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIE 359
           FAPLAKLLGMYQIKSELENLSFMYTNA+DYA VKRRVADLYKEHEKEL EANKILM+KIE
Sbjct: 300 FAPLAKLLGMYQIKSELENLSFMYTNAQDYAMVKRRVADLYKEHEKELVEANKILMEKIE 359

Query: 360 DDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLC 419
           DDQFLDLMTVKT++R+VCKEPYSIYKAV KSRGSINEVNQIAQLRIIIKPKPC+GVGPLC
Sbjct: 360 DDQFLDLMTVKTDVRAVCKEPYSIYKAVHKSRGSINEVNQIAQLRIIIKPKPCTGVGPLC 419

Query: 420 SPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRT 479
           S QQICYHVLGLVHGIWTP+PRAMKDYIATPKPNGYQSLHTT+IPFLYESMFRLEVQIRT
Sbjct: 420 SAQQICYHVLGLVHGIWTPVPRAMKDYIATPKPNGYQSLHTTVIPFLYESMFRLEVQIRT 479

Query: 480 EEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREW 539
           EEMD+IAERGIAAHYSGRVFV GL+G A   G S RGKT CLNNANIALRISWLNAIREW
Sbjct: 480 EEMDVIAERGIAAHYSGRVFVGGLIGRATSGG-SSRGKTGCLNNANIALRISWLNAIREW 538

Query: 540 QEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMV 599
           QEEFVGNMTSREFVDT+T+DLLGSRVFVFTPRGEIKNLPKGATV+DYAYMIHTEIGNKMV
Sbjct: 539 QEEFVGNMTSREFVDTVTKDLLGSRVFVFTPRGEIKNLPKGATVIDYAYMIHTEIGNKMV 598

Query: 600 AAKVNGNLVSPTHVLANAEVVEIITYN 626
           AAKVNGNLVSP HVLANAEVVEIITYN
Sbjct: 599 AAKVNGNLVSPMHVLANAEVVEIITYN 625


>gi|225437434|ref|XP_002272154.1| PREDICTED: GTP pyrophosphokinase-like [Vitis vinifera]
          Length = 887

 Score = 1077 bits (2784), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 536/631 (84%), Positives = 562/631 (89%), Gaps = 7/631 (1%)

Query: 1   MASAASMSVSVECVNICKLPKGDGSGRYYDCSVLSCAWKAPRALTGFLASTTHPAHSSSL 60
           MASA SMSVSVECVNICK  KGDGS R+ DCSVLSCAWKAPR L+GFLAST H    S  
Sbjct: 1   MASAPSMSVSVECVNICKFSKGDGSVRH-DCSVLSCAWKAPRVLSGFLASTAHSPQCSLS 59

Query: 61  SLGPTGRRNRIN----SRCEAFDVGSWCT-EGSDLVLLGKLPRSSLLHVACKRWRLCLSP 115
           S   +G RNRI      R EA DVG W + E SD VL  +L RS+L HVA +RW+   S 
Sbjct: 60  SCAGSGGRNRIKYVSWQRYEAHDVGGWHSHEASDFVLPERLIRSNLFHVASRRWKSSCSS 119

Query: 116 SVSSDAFKEDSPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHP 175
           S SS AF + SPE LWEDL+P ISYL P ELELV  AL LAFEAHDGQKRRSGEPFIIHP
Sbjct: 120 SFSSVAFDKVSPESLWEDLKPAISYLPPQELELVHNALKLAFEAHDGQKRRSGEPFIIHP 179

Query: 176 VEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGK 235
           VEVARILGELELDWESIAAGLLHDTVEDTNVVTF+ +E EFGATVR IVEGETKVSKLGK
Sbjct: 180 VEVARILGELELDWESIAAGLLHDTVEDTNVVTFDSLEREFGATVRHIVEGETKVSKLGK 239

Query: 236 LKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATE 295
           LK KNEN SVQDVKADDLRQMFLAMT+EVRVIIVKLADRLHNMRTLSHMPPHKQ SIATE
Sbjct: 240 LKRKNENDSVQDVKADDLRQMFLAMTQEVRVIIVKLADRLHNMRTLSHMPPHKQVSIATE 299

Query: 296 TLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILM 355
           TLQVFAPLAKLLGMYQIKSELENLSFMYTNA+DYA VKRRVADLYKEHEKEL EANKILM
Sbjct: 300 TLQVFAPLAKLLGMYQIKSELENLSFMYTNAQDYAMVKRRVADLYKEHEKELVEANKILM 359

Query: 356 KKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGV 415
           +KIEDDQFLDLMTVKT++R+VCKEPYSIYKAV KSRGSINEVNQIAQLRIIIKPKPC+GV
Sbjct: 360 EKIEDDQFLDLMTVKTDVRAVCKEPYSIYKAVHKSRGSINEVNQIAQLRIIIKPKPCTGV 419

Query: 416 GPLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEV 475
           GPLCS QQICYHVLGLVHGIWTP+PRAMKDYIATPKPNGYQSLHTT+IPFLYESMFRLEV
Sbjct: 420 GPLCSAQQICYHVLGLVHGIWTPVPRAMKDYIATPKPNGYQSLHTTVIPFLYESMFRLEV 479

Query: 476 QIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNA 535
           QIRTEEMD+IAERGIAAHYSGRVFV GL+G A   G S RGKT CLNNANIALRISWLNA
Sbjct: 480 QIRTEEMDVIAERGIAAHYSGRVFVGGLIGRATSGG-SSRGKTGCLNNANIALRISWLNA 538

Query: 536 IREWQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIG 595
           IREWQEEFVGNMTSREFVDT+T+DLLGSRVFVFTPRGEIKNLPKGATV+DYAYMIHTEIG
Sbjct: 539 IREWQEEFVGNMTSREFVDTVTKDLLGSRVFVFTPRGEIKNLPKGATVIDYAYMIHTEIG 598

Query: 596 NKMVAAKVNGNLVSPTHVLANAEVVEIITYN 626
           NKMVAAKVNGNLVSP HVLANAEVVEIITYN
Sbjct: 599 NKMVAAKVNGNLVSPMHVLANAEVVEIITYN 629


>gi|449469300|ref|XP_004152359.1| PREDICTED: GTP pyrophosphokinase-like [Cucumis sativus]
          Length = 883

 Score = 1066 bits (2756), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 520/627 (82%), Positives = 557/627 (88%), Gaps = 1/627 (0%)

Query: 1   MASAASMSVSVECVNICKLPKGDGSGRYYDCSVLSCAWKAPRALTGFLASTTHPAHSSSL 60
           MASA SMSVS+ECVNICK  KGDGS   YDCS+LSCAWKAPR LTGFLASTTH  H SS 
Sbjct: 1   MASAPSMSVSLECVNICKFSKGDGSSGRYDCSILSCAWKAPRVLTGFLASTTHSLHCSSF 60

Query: 61  SLGPTGRRNRINSRCEAFDVGSW-CTEGSDLVLLGKLPRSSLLHVACKRWRLCLSPSVSS 119
                G+R+RINSR E+ +V  W   E S+ V LG+L +S LLH  C+R + C S  +SS
Sbjct: 61  LYSKNGKRSRINSRFESINVRGWYSNEVSNHVHLGRLLKSGLLHDVCRRKKFCCSSFLSS 120

Query: 120 DAFKEDSPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVA 179
           DAF E SPE LWEDL+PTISYLSP ELELV  AL LAFEAHDGQKRRSGEPFIIHPVEVA
Sbjct: 121 DAFDEVSPEGLWEDLKPTISYLSPKELELVHNALKLAFEAHDGQKRRSGEPFIIHPVEVA 180

Query: 180 RILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCK 239
           RILGELELDWE+IAAGLLHDTVEDT+ VTFE+IEEEFGATVR IVEGETKVSKLGKLKCK
Sbjct: 181 RILGELELDWETIAAGLLHDTVEDTDFVTFEKIEEEFGATVRHIVEGETKVSKLGKLKCK 240

Query: 240 NENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQV 299
           NE +SVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIA ETLQV
Sbjct: 241 NECNSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIARETLQV 300

Query: 300 FAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIE 359
           FAPLAKLLGMYQIKSELENLSFMYTN EDY+KVKRRVADL KEHEKEL EA KILMK+I+
Sbjct: 301 FAPLAKLLGMYQIKSELENLSFMYTNPEDYSKVKRRVADLSKEHEKELIEAKKILMKRIQ 360

Query: 360 DDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLC 419
           +DQFLDLMT++T++RSVCKEPYSIYKAVLKS+ SI+EVNQIAQLRIII+PK    VGPLC
Sbjct: 361 EDQFLDLMTMRTDVRSVCKEPYSIYKAVLKSQCSISEVNQIAQLRIIIQPKKGIDVGPLC 420

Query: 420 SPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRT 479
           SPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTT+IPFLYESMFRLEVQIRT
Sbjct: 421 SPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTVIPFLYESMFRLEVQIRT 480

Query: 480 EEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREW 539
           EEMDLIAERGIA HY G   VT  V ++ PN RS RGK VCL++ANIALRI WLNAIREW
Sbjct: 481 EEMDLIAERGIATHYCGGGLVTSPVRNSMPNSRSSRGKAVCLSDANIALRIGWLNAIREW 540

Query: 540 QEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMV 599
           QEEFVGNM+SREFVDT+TRDLLGSRVFVFTPRGEIKNLPKGATV+DYAYMIHTE+GNKMV
Sbjct: 541 QEEFVGNMSSREFVDTVTRDLLGSRVFVFTPRGEIKNLPKGATVIDYAYMIHTEVGNKMV 600

Query: 600 AAKVNGNLVSPTHVLANAEVVEIITYN 626
           AAKVNGNLVSP HVL NAEVVEIITYN
Sbjct: 601 AAKVNGNLVSPMHVLVNAEVVEIITYN 627


>gi|255564246|ref|XP_002523120.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase, putative
           [Ricinus communis]
 gi|223537682|gb|EEF39305.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase, putative
           [Ricinus communis]
          Length = 887

 Score = 1065 bits (2755), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 518/616 (84%), Positives = 548/616 (88%), Gaps = 5/616 (0%)

Query: 12  ECVNICKLPKGDGSGRYYDCSVLSCAWKAPRALTGFLASTTHPAHSSSLSLGPTGRRNRI 71
           ECVNICKLPKGD     YDC+VLSCAWKAPR LTGFLAST HP   SSLS     RRN  
Sbjct: 19  ECVNICKLPKGD----RYDCNVLSCAWKAPRVLTGFLASTAHPHQCSSLSSARNCRRNHF 74

Query: 72  NSRCEAFDVGSWCT-EGSDLVLLGKLPRSSLLHVACKRWRLCLSPSVSSDAFKEDSPERL 130
            S+C  F++ S  + E      + KL R+ LL+VA +RW+L  S  +S   + E SP+RL
Sbjct: 75  KSKCGTFEIASSNSIEAFGSAFVEKLFRTRLLNVAGQRWQLYCSSPISMGTWNEVSPKRL 134

Query: 131 WEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWE 190
           WEDL+P +SYLSP ELELV  AL LAFEAHDGQKRRSGEPFI+HPVEVARILGELELDWE
Sbjct: 135 WEDLKPAVSYLSPKELELVHSALELAFEAHDGQKRRSGEPFIVHPVEVARILGELELDWE 194

Query: 191 SIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKA 250
           SIAAGLLHDTVEDTNVVTFERIEEEFG TVR IVEGETKVSKLGKLKCKNE+ S QDVKA
Sbjct: 195 SIAAGLLHDTVEDTNVVTFERIEEEFGPTVRHIVEGETKVSKLGKLKCKNESDSAQDVKA 254

Query: 251 DDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMY 310
           DDLRQMFLAMTEEVRVIIVKLADRLHNMRTLS+MPPHKQSSIA ETLQVFAPLAKLLGMY
Sbjct: 255 DDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSYMPPHKQSSIAMETLQVFAPLAKLLGMY 314

Query: 311 QIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVK 370
           QIKSELENLSFMYT  EDYAK+KRRVADLYKEHEKEL EANKIL KKIE+DQFLDLMTVK
Sbjct: 315 QIKSELENLSFMYTKPEDYAKIKRRVADLYKEHEKELLEANKILEKKIEEDQFLDLMTVK 374

Query: 371 TEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLG 430
           TE+RS CKEPYSIYKAVLKS+ SI EVNQIAQLRII+KPKPC GVGP C+PQQICYHVLG
Sbjct: 375 TEVRSACKEPYSIYKAVLKSKSSICEVNQIAQLRIIVKPKPCVGVGPFCTPQQICYHVLG 434

Query: 431 LVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGI 490
           LVHGIWTPIPRAMKDYIATPKPNGYQSLHTT+IPFLYESMFRLEVQ+RTEEMDLIAERGI
Sbjct: 435 LVHGIWTPIPRAMKDYIATPKPNGYQSLHTTVIPFLYESMFRLEVQVRTEEMDLIAERGI 494

Query: 491 AAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSR 550
           AAHYSG+VFVTGLVG A PNGRS RGKTVCLNNANIALRI WLNAIREWQEEFVGNM+SR
Sbjct: 495 AAHYSGKVFVTGLVGRAVPNGRSSRGKTVCLNNANIALRIGWLNAIREWQEEFVGNMSSR 554

Query: 551 EFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSP 610
           EFVDTITRDLLGSRVFVFTPRGEIKNLPKGAT +DYAYMIHT+IGNKMVAAKVNGNLVSP
Sbjct: 555 EFVDTITRDLLGSRVFVFTPRGEIKNLPKGATAIDYAYMIHTDIGNKMVAAKVNGNLVSP 614

Query: 611 THVLANAEVVEIITYN 626
            HVLANAEVVEIITYN
Sbjct: 615 MHVLANAEVVEIITYN 630


>gi|449484441|ref|XP_004156884.1| PREDICTED: LOW QUALITY PROTEIN: GTP pyrophosphokinase-like [Cucumis
           sativus]
          Length = 883

 Score = 1063 bits (2750), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 519/627 (82%), Positives = 556/627 (88%), Gaps = 1/627 (0%)

Query: 1   MASAASMSVSVECVNICKLPKGDGSGRYYDCSVLSCAWKAPRALTGFLASTTHPAHSSSL 60
           MASA SMSVS+ECVNICK  KGDGS   YDCS+LSCAWKAPR LTGFLASTTH  H SS 
Sbjct: 1   MASAPSMSVSLECVNICKFSKGDGSSGRYDCSILSCAWKAPRVLTGFLASTTHSLHCSSF 60

Query: 61  SLGPTGRRNRINSRCEAFDVGSW-CTEGSDLVLLGKLPRSSLLHVACKRWRLCLSPSVSS 119
                G+R+RINSR E+ +V  W   E S+ V LG+L +S LLH  C+R + C S  +SS
Sbjct: 61  LYSKNGKRSRINSRFESINVRGWYSNEVSNHVHLGRLLKSGLLHDVCRRKKFCCSSFLSS 120

Query: 120 DAFKEDSPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVA 179
           DAF E SPE LWEDL+PTISYLSP ELELV  AL LAFEAHDGQKRRSGEPFIIHPVEVA
Sbjct: 121 DAFDEVSPEGLWEDLKPTISYLSPKELELVHNALKLAFEAHDGQKRRSGEPFIIHPVEVA 180

Query: 180 RILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCK 239
           RILGELELDWE+IAAGLLHDTVEDT+ VTFE+IEEEFGATVR IVEGETKVSKLGKLKCK
Sbjct: 181 RILGELELDWETIAAGLLHDTVEDTDFVTFEKIEEEFGATVRHIVEGETKVSKLGKLKCK 240

Query: 240 NENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQV 299
           NE +SVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIA ETLQV
Sbjct: 241 NECNSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIARETLQV 300

Query: 300 FAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIE 359
           FAPLAKLLGMYQIKSELENLSFMYTN EDY+KVKRRVADL KEHEKEL EA KILMK+I+
Sbjct: 301 FAPLAKLLGMYQIKSELENLSFMYTNPEDYSKVKRRVADLSKEHEKELIEAKKILMKRIQ 360

Query: 360 DDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLC 419
           +DQFLDLMT++T++RSVCKEPYSIYKAVLKS+ SI+EVNQIAQLRIII+PK    VGPLC
Sbjct: 361 EDQFLDLMTMRTDVRSVCKEPYSIYKAVLKSQCSISEVNQIAQLRIIIQPKKGIDVGPLC 420

Query: 420 SPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRT 479
           SPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTT+IPFLYESMFRLEVQIRT
Sbjct: 421 SPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTVIPFLYESMFRLEVQIRT 480

Query: 480 EEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREW 539
           EEMDLIAERGIA HY G   VT  V ++ PN RS RGK VCL++ANIALRI WLNAIREW
Sbjct: 481 EEMDLIAERGIATHYCGGGLVTSPVRNSMPNSRSSRGKAVCLSDANIALRIGWLNAIREW 540

Query: 540 QEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMV 599
           QEEFVGNM+SREFVDT+TRDLLGSR FVFTPRGEIKNLPKGATV+DYAYMIHTE+GNKMV
Sbjct: 541 QEEFVGNMSSREFVDTVTRDLLGSRXFVFTPRGEIKNLPKGATVIDYAYMIHTEVGNKMV 600

Query: 600 AAKVNGNLVSPTHVLANAEVVEIITYN 626
           AAKVNGNLVSP HVL NAEVVEIITYN
Sbjct: 601 AAKVNGNLVSPMHVLVNAEVVEIITYN 627


>gi|356503913|ref|XP_003520744.1| PREDICTED: GTP pyrophosphokinase-like [Glycine max]
          Length = 882

 Score = 1062 bits (2746), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 519/616 (84%), Positives = 550/616 (89%), Gaps = 4/616 (0%)

Query: 12  ECVNICKLPKGDGSGRYYDCSVLSCAWKAPRALTGFLASTTHPAHSSSLSLGPTGRRNRI 71
           ECVN CKL +GDG+GR+ DCS+LS AWKAPR LTGFLAST HP   S LS G  GRRNR 
Sbjct: 12  ECVNACKLWRGDGNGRF-DCSLLSSAWKAPRVLTGFLASTAHPHQCSDLSNGRNGRRNRY 70

Query: 72  NSRCEAFDVGSWC-TEGSDLVLLGKLPRSSLLHVACKRWRLCLSPSVSSDAFKEDSPERL 130
           N  CE F V   C  E  D+VL     RS L   A +RW+LC S  ++ DA  + S E L
Sbjct: 71  NFGCETFSVDGSCRDEPIDIVLFEGCSRSMLSQNAPRRWQLCCS--LAPDAVTDFSAESL 128

Query: 131 WEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWE 190
           WEDL P ISYLSP ELELV  A MLAF+AHDGQKRRSGEPFIIHPVEVARILGELELDWE
Sbjct: 129 WEDLTPVISYLSPKELELVYNAFMLAFKAHDGQKRRSGEPFIIHPVEVARILGELELDWE 188

Query: 191 SIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKA 250
           SIAAGLLHDTVEDTNVVTFERIEEEFGATVR IVEGETKVSKLGKLK KNEN SVQDVKA
Sbjct: 189 SIAAGLLHDTVEDTNVVTFERIEEEFGATVRHIVEGETKVSKLGKLKYKNENDSVQDVKA 248

Query: 251 DDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMY 310
           +DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQ+SIA ETLQVFAPLAKLLGMY
Sbjct: 249 EDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQTSIAMETLQVFAPLAKLLGMY 308

Query: 311 QIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVK 370
           QIKSELENLSFMYTNAEDYAKVKRRVA+LYKEHEKEL EANK+LMKKI+DDQFLDL+TVK
Sbjct: 309 QIKSELENLSFMYTNAEDYAKVKRRVAELYKEHEKELLEANKMLMKKIQDDQFLDLLTVK 368

Query: 371 TEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLG 430
           TE+R+VCKEPYSIYKAVLKS+ SINE+NQIAQLRIIIKPK C GVGPLC+PQQICYHVLG
Sbjct: 369 TEVRAVCKEPYSIYKAVLKSKSSINEINQIAQLRIIIKPKQCIGVGPLCNPQQICYHVLG 428

Query: 431 LVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGI 490
           L+HGIWTPIPR++KDYIATPKPNGYQSL TT+IPFLYESMFRLEVQIRTEEMDLIAERGI
Sbjct: 429 LIHGIWTPIPRSVKDYIATPKPNGYQSLQTTVIPFLYESMFRLEVQIRTEEMDLIAERGI 488

Query: 491 AAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSR 550
           AAHYSGR FVTGLVG A P+ +S RGKTVCLNNANIALRI WLNAIREWQEEFVGNM+SR
Sbjct: 489 AAHYSGREFVTGLVGSATPSSKSSRGKTVCLNNANIALRIGWLNAIREWQEEFVGNMSSR 548

Query: 551 EFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSP 610
           EFVDTITRDLLGSRVFVFTPRGEIKNLP+GATV+DYAYMIHTEIGNKMVAAKVNGNLVSP
Sbjct: 549 EFVDTITRDLLGSRVFVFTPRGEIKNLPQGATVIDYAYMIHTEIGNKMVAAKVNGNLVSP 608

Query: 611 THVLANAEVVEIITYN 626
            HVLANAEVVEIITYN
Sbjct: 609 AHVLANAEVVEIITYN 624


>gi|356570978|ref|XP_003553659.1| PREDICTED: GTP pyrophosphokinase-like [Glycine max]
          Length = 882

 Score = 1060 bits (2740), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 517/616 (83%), Positives = 553/616 (89%), Gaps = 4/616 (0%)

Query: 12  ECVNICKLPKGDGSGRYYDCSVLSCAWKAPRALTGFLASTTHPAHSSSLSLGPTGRRNRI 71
           ECVN CK  +GDG+ R+ DCS+LSCAWKAPRALTGFLAST HP   S+LS G  GRRNR 
Sbjct: 12  ECVNACKPWRGDGNVRF-DCSLLSCAWKAPRALTGFLASTAHPHQCSNLSNGRNGRRNRY 70

Query: 72  NSRCEAFDVGSWC-TEGSDLVLLGKLPRSSLLHVACKRWRLCLSPSVSSDAFKEDSPERL 130
           N  CEAF VG  C  E  D++L     RS     A +RW+LC S  ++S+   E S E L
Sbjct: 71  NFGCEAFSVGGSCHDEPLDIILFEGYSRSISCQNAPRRWQLCCS--LASNTVTEFSAESL 128

Query: 131 WEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWE 190
           WEDL+P ISYLSP ELELV  A MLAF+AHDGQKRRSGEPFIIHPVEVARILGELELDWE
Sbjct: 129 WEDLKPAISYLSPKELELVYNAFMLAFKAHDGQKRRSGEPFIIHPVEVARILGELELDWE 188

Query: 191 SIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKA 250
           SIAAGLLHDTVEDTNVVTFERIEEEFGATVR IVEGETKVSKLGKLK KNEN SVQDVKA
Sbjct: 189 SIAAGLLHDTVEDTNVVTFERIEEEFGATVRHIVEGETKVSKLGKLKYKNENDSVQDVKA 248

Query: 251 DDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMY 310
           +DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQ+SIA ETLQVFAPLAKLLGMY
Sbjct: 249 EDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQTSIAMETLQVFAPLAKLLGMY 308

Query: 311 QIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVK 370
           QIKSELENLSFMYTNAEDYAKVKRRVA+LYKEHEKEL EANK+LMKKI+DDQFLDL+TVK
Sbjct: 309 QIKSELENLSFMYTNAEDYAKVKRRVAELYKEHEKELLEANKMLMKKIQDDQFLDLLTVK 368

Query: 371 TEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLG 430
           T++R+VCKEPYSIYKAVLKS+ SI+E+NQIAQLRIIIKPK C GVGPLC+PQQICYHVLG
Sbjct: 369 TKVRAVCKEPYSIYKAVLKSKSSISEINQIAQLRIIIKPKQCIGVGPLCNPQQICYHVLG 428

Query: 431 LVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGI 490
           L+HGIWTPIPR++KDYIATPKPNGYQSL TT+IPFLYESMFRLEVQIRTEEMDLIAERGI
Sbjct: 429 LIHGIWTPIPRSVKDYIATPKPNGYQSLQTTVIPFLYESMFRLEVQIRTEEMDLIAERGI 488

Query: 491 AAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSR 550
           AAHYSGR FVTGLVG A P+ +S RGKTVCLNNANIALRI WLNAIREWQEEFVGNM+SR
Sbjct: 489 AAHYSGREFVTGLVGSATPSSKSSRGKTVCLNNANIALRIGWLNAIREWQEEFVGNMSSR 548

Query: 551 EFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSP 610
           EFVDTITRDLLGSRVFVFTPRGEIKNLP+GATV+DYAYMIHTEIGNKMVAAKVNGNLVSP
Sbjct: 549 EFVDTITRDLLGSRVFVFTPRGEIKNLPQGATVIDYAYMIHTEIGNKMVAAKVNGNLVSP 608

Query: 611 THVLANAEVVEIITYN 626
            HVLANAEVVEIITYN
Sbjct: 609 AHVLANAEVVEIITYN 624


>gi|30268666|dbj|BAC76004.1| RelA-SpoT like protein RSH1 [Nicotiana tabacum]
          Length = 876

 Score = 1050 bits (2714), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 517/627 (82%), Positives = 560/627 (89%), Gaps = 8/627 (1%)

Query: 1   MASAASMSVSVECVNICKLPKGDGSGRYYDCSVLSCAWKAPRALTGFLASTTHPAHSSSL 60
           MASA SMSVS+ECVNICK  KGD SGR+ DCSVLSCAWKAPRALTGFLASTTHP+  SS 
Sbjct: 1   MASATSMSVSIECVNICKSWKGDVSGRF-DCSVLSCAWKAPRALTGFLASTTHPSQCSST 59

Query: 61  SLGPTGRRNRIN-SRCEAFDVGSWCTEGSDLVLLGKLPRSSLLHVACKRWRLCLSPSVSS 119
                GRRNR++  RC   D+    ++ +    L  +P S LL     +W+LC S S SS
Sbjct: 60  PY-RYGRRNRLHRCRCYTSDMDERYSDEA----LQAVPGSRLLLTTSSKWKLCCSLSFSS 114

Query: 120 DAFKEDSPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVA 179
           ++ +E SPE LWE L P+ISYLS  ELELVR+AL LAFEAHDGQKRRSGEPFIIHPV VA
Sbjct: 115 ESCEEISPESLWEGLIPSISYLSYKELELVRKALNLAFEAHDGQKRRSGEPFIIHPVAVA 174

Query: 180 RILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCK 239
           +ILG+LELDWESIAAGLLHDTVEDTNVVTFERIE+EFG TVRRIVEGETKVSKLGK+KCK
Sbjct: 175 QILGQLELDWESIAAGLLHDTVEDTNVVTFERIEKEFGPTVRRIVEGETKVSKLGKIKCK 234

Query: 240 NENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQV 299
           +E+H VQDVKADDLRQMFL+MTEEVRVIIVKLADRLHNMRTLSHMPPHKQS IATETLQV
Sbjct: 235 DESH-VQDVKADDLRQMFLSMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSGIATETLQV 293

Query: 300 FAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIE 359
           FAPLAKLLG+YQIKSELENL+FMYTNA+DYA+V+RR+A+LYKEHEKEL+EA +ILMKKIE
Sbjct: 294 FAPLAKLLGIYQIKSELENLAFMYTNAQDYARVQRRIAELYKEHEKELKEAKRILMKKIE 353

Query: 360 DDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLC 419
           +DQFLDL+TVKTEI S+CKEPYSIYKAVLKS+ SINEVNQIAQLRIIIKPKPC GV PLC
Sbjct: 354 EDQFLDLVTVKTEIHSICKEPYSIYKAVLKSKNSINEVNQIAQLRIIIKPKPCVGVRPLC 413

Query: 420 SPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRT 479
           S QQICYHVLGLVHGIWTPIPRAMKDY+ATPKPNGYQSLHTT+IPFLYESMFRLEVQIRT
Sbjct: 414 SAQQICYHVLGLVHGIWTPIPRAMKDYVATPKPNGYQSLHTTVIPFLYESMFRLEVQIRT 473

Query: 480 EEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREW 539
           EEMDLIAERGIAAHYSG+ FV GLVGH   NGRS RGK VCLNNANIALRI WLNAIREW
Sbjct: 474 EEMDLIAERGIAAHYSGKGFVNGLVGHVITNGRSSRGKIVCLNNANIALRIGWLNAIREW 533

Query: 540 QEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMV 599
           QEEFVGNM+SREFVDTITRDLLGSRVFVFTP GEIK+LPKGATV+DYAYMIHTEIGNKMV
Sbjct: 534 QEEFVGNMSSREFVDTITRDLLGSRVFVFTPGGEIKHLPKGATVIDYAYMIHTEIGNKMV 593

Query: 600 AAKVNGNLVSPTHVLANAEVVEIITYN 626
           AAKVNGNLVSP HVLANAEVVEIITYN
Sbjct: 594 AAKVNGNLVSPLHVLANAEVVEIITYN 620


>gi|307066606|gb|ADN23834.1| RSH1 [Ipomoea nil]
          Length = 885

 Score = 1023 bits (2644), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 499/628 (79%), Positives = 548/628 (87%), Gaps = 4/628 (0%)

Query: 1   MASAASMSVSVECVNICKLPKGDGSGRYYDCSVLSCAWKAPRALTGFLASTTHPAHSSSL 60
           M SA+SMSVSVECVNICK      SGR  +C+VL CA KAPRALTG LAST HP    + 
Sbjct: 1   MTSASSMSVSVECVNICKFWNSVVSGRL-NCNVLPCASKAPRALTGLLASTAHPPQFCAG 59

Query: 61  SLGPTGRRNRINSRCEAFDVGSWC-TEGSDLVLLGKLPRSSLLHVACKRWRLCLSPSVSS 119
           S G  GRR+ +  RC A D+G W   E S++V    L  S L+H A  +W+L  S S S 
Sbjct: 60  SYGRAGRRSSVRCRCNAHDIGGWSPGEDSEIVHPHTLLSSRLIHSASCKWKLRCSSSFSP 119

Query: 120 DAFKEDSPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVA 179
             ++E SPE LWEDL+PTISYLSP ELELV+ AL LAFEAHDGQKRRSGEPFIIHPV VA
Sbjct: 120 KPYEEISPESLWEDLQPTISYLSPKELELVQNALNLAFEAHDGQKRRSGEPFIIHPVAVA 179

Query: 180 RILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCK 239
           +ILGELELDWESIAAGLLHDTVEDTNVVTFERIE+EFG TVR IVEGETKVSKLGK+K K
Sbjct: 180 QILGELELDWESIAAGLLHDTVEDTNVVTFERIEQEFGVTVRHIVEGETKVSKLGKIKYK 239

Query: 240 NENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQV 299
           +ENHS QDVKADDLRQMFL+MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIA ETLQV
Sbjct: 240 DENHSAQDVKADDLRQMFLSMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIAKETLQV 299

Query: 300 FAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIE 359
           FAPLAKLLGMYQIKSELENL+FMYTNA+DYAKV+RR+++LYKEHEKEL EA +IL KKIE
Sbjct: 300 FAPLAKLLGMYQIKSELENLAFMYTNAQDYAKVQRRISELYKEHEKELLEAKRILTKKIE 359

Query: 360 DDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLC 419
           DDQFLDLM V  E+RSVCKEPYSIY++VLKS+ SINEVNQIAQ+R++IKPKPC+GVGPLC
Sbjct: 360 DDQFLDLMLVNAEVRSVCKEPYSIYRSVLKSKSSINEVNQIAQIRVVIKPKPCAGVGPLC 419

Query: 420 SPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRT 479
           + QQICYHVLGLVHGIWTPIPRA+KDYIATPKPNGYQSLHTT+IPFLYESM RLEVQIRT
Sbjct: 420 NAQQICYHVLGLVHGIWTPIPRAVKDYIATPKPNGYQSLHTTVIPFLYESMLRLEVQIRT 479

Query: 480 EEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRS-PRGKTVCLNNANIALRISWLNAIRE 538
           EEMDLIAERGIAAHYSG+  + G++GHA  NG S   GKTVCLNNAN+ALRI WLNAIRE
Sbjct: 480 EEMDLIAERGIAAHYSGK-GLNGVIGHAIHNGSSRGHGKTVCLNNANVALRIGWLNAIRE 538

Query: 539 WQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKM 598
           WQEEFVGNM SREFVDT+TRDLLGSRVFVFTPRGEIKNLP+GATV+DYAYMIHTEIGNKM
Sbjct: 539 WQEEFVGNMASREFVDTVTRDLLGSRVFVFTPRGEIKNLPRGATVIDYAYMIHTEIGNKM 598

Query: 599 VAAKVNGNLVSPTHVLANAEVVEIITYN 626
           VAAKVNGN+VSP HVLANAEVVEIITY+
Sbjct: 599 VAAKVNGNIVSPVHVLANAEVVEIITYS 626


>gi|297814083|ref|XP_002874925.1| hypothetical protein ARALYDRAFT_490346 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297320762|gb|EFH51184.1| hypothetical protein ARALYDRAFT_490346 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 883

 Score =  983 bits (2542), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 485/630 (76%), Positives = 535/630 (84%), Gaps = 7/630 (1%)

Query: 1   MASAASMSVSVECVNICKLPKGDGSGRYYDCSVLSCAWKAPRALTGFLASTTHPAHSSSL 60
           M SA+SMSVSVECVNIC L KGDG+ R  DC+ LSCAWKAPRALTGFLA+T HP   S  
Sbjct: 1   MTSASSMSVSVECVNICNLTKGDGNARS-DCNALSCAWKAPRALTGFLATTAHPPVCSLY 59

Query: 61  SLGPTGRRNRINS---RCEAFDVGSWCTEGSDLVLLGKLPRSSLLHVACKRWRLCLSPSV 117
           S G  GR+NR+ +   R   ++VG   +E  D+V +  + +S L     KRW L   P  
Sbjct: 60  SCGRNGRKNRMKACAWRRYEYEVG--FSEAPDVVNVRNILKSKLSCGGHKRWELYCVPVE 117

Query: 118 SSDAFKEDSPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVE 177
           SS A  + + E LWEDL P+ISYL   ELE V++ L LAFEAH GQKRRSGEPFIIHPV 
Sbjct: 118 SSGASDDVTVETLWEDLFPSISYLPCKELEFVQKGLKLAFEAHHGQKRRSGEPFIIHPVA 177

Query: 178 VARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLK 237
           VARILGELELDWESI AGLLHDTVEDTN +TFE+IEEEFGATVR IVEGETKVSKLGKLK
Sbjct: 178 VARILGELELDWESIVAGLLHDTVEDTNFITFEKIEEEFGATVRHIVEGETKVSKLGKLK 237

Query: 238 CKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETL 297
           CK E+ S+QDVKADDLRQMFLAMT+EVRVIIVKLADRLHNMRTL HMPPHKQSSIA ETL
Sbjct: 238 CKTESESIQDVKADDLRQMFLAMTDEVRVIIVKLADRLHNMRTLCHMPPHKQSSIAGETL 297

Query: 298 QVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKK 357
           QVFAPLAKLLGMY IKSELENLSFMY +AEDY +V  R+A+LYKEHEKEL EAN+IL+KK
Sbjct: 298 QVFAPLAKLLGMYSIKSELENLSFMYVSAEDYDRVTSRIANLYKEHEKELTEANRILVKK 357

Query: 358 IEDDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIA-QLRIIIKPKPCSGVG 416
           IEDDQFLDL+TV T++RSVCKE YSIYKA LKS+GSIN+ NQIA QLRI++KPKP  GVG
Sbjct: 358 IEDDQFLDLVTVNTDVRSVCKETYSIYKAALKSKGSINDYNQIAQQLRIVVKPKPSVGVG 417

Query: 417 PLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQ 476
           PLCSPQQICYHVLGLVH IW PIPR +KDYIATPKPNGYQSLHTT+IPFLYESMFRLEVQ
Sbjct: 418 PLCSPQQICYHVLGLVHEIWKPIPRTVKDYIATPKPNGYQSLHTTVIPFLYESMFRLEVQ 477

Query: 477 IRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAI 536
           IRTEEMDLIAERGIA +Y+G+    GLV +A P GR+ RGKT CLNNA+ ALR+ WLNAI
Sbjct: 478 IRTEEMDLIAERGIAVYYNGKALSAGLVANAVPLGRNSRGKTGCLNNADFALRVGWLNAI 537

Query: 537 REWQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGN 596
           REWQEEFVGNM+SREFVDTITRDLLGSRVFVFTP+GEIKNLPKGATVVDYAY+IHTEIGN
Sbjct: 538 REWQEEFVGNMSSREFVDTITRDLLGSRVFVFTPKGEIKNLPKGATVVDYAYLIHTEIGN 597

Query: 597 KMVAAKVNGNLVSPTHVLANAEVVEIITYN 626
           KMVAAKVNGNLVSPTHVL NAEVVEI+TYN
Sbjct: 598 KMVAAKVNGNLVSPTHVLENAEVVEIVTYN 627


>gi|42572809|ref|NP_974501.1| RelA-SpoT like protein RSH1 [Arabidopsis thaliana]
 gi|332656746|gb|AEE82146.1| RelA-SpoT like protein RSH1 [Arabidopsis thaliana]
          Length = 816

 Score =  980 bits (2533), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 488/631 (77%), Positives = 538/631 (85%), Gaps = 9/631 (1%)

Query: 1   MASAASMSVSVECVNICKLPKGDGSGRYYDCSVLSCAWKAPRALTGFLASTTHPAHSSSL 60
           M SA+SMSVSVECVNIC L KGDG+ R  DCS LSCAWKAPRALTGFLAST HP   S  
Sbjct: 1   MTSASSMSVSVECVNICNLTKGDGNARS-DCSALSCAWKAPRALTGFLASTAHPPVCSVY 59

Query: 61  SLGPTGRRNRINS----RCEAFDVGSWCTEGSDLVLLGKLPRSSLLHVACKRWRL-CLSP 115
           S G  GR++R+ +    R E ++VG   +E    V +  + +S L     KRW L C+S 
Sbjct: 60  SCGRNGRKSRMKACAWQRYE-YEVG--FSEAPYFVNVRNILKSRLSCGGHKRWELYCVSA 116

Query: 116 SVSSDAFKEDSPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHP 175
             SS A  + + E LWEDL P+ISYL   ELE V++ L LAFEAH GQKRRSGEPFIIHP
Sbjct: 117 ESSSGASSDVTVETLWEDLFPSISYLPRKELEFVQKGLKLAFEAHHGQKRRSGEPFIIHP 176

Query: 176 VEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGK 235
           V VARILGELELDWESI AGLLHDTVEDTN +TFE+IEEEFGATVR IVEGETKVSKLGK
Sbjct: 177 VAVARILGELELDWESIVAGLLHDTVEDTNFITFEKIEEEFGATVRHIVEGETKVSKLGK 236

Query: 236 LKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATE 295
           LKCK E+ ++QDVKADDLRQMFLAMT+EVRVIIVKLADRLHNMRTL HMPPHKQSSIA E
Sbjct: 237 LKCKTESETIQDVKADDLRQMFLAMTDEVRVIIVKLADRLHNMRTLCHMPPHKQSSIAGE 296

Query: 296 TLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILM 355
           TLQVFAPLAKLLGMY IKSELENLSFMY +AEDY +V  R+A+LYKEHEKEL EAN+IL+
Sbjct: 297 TLQVFAPLAKLLGMYSIKSELENLSFMYVSAEDYDRVTSRIANLYKEHEKELTEANRILV 356

Query: 356 KKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGV 415
           KKIEDDQFLDL+TV T++RSVCKE YSIYKA LKS+GSIN+ NQIAQLRI++KPKP  GV
Sbjct: 357 KKIEDDQFLDLVTVNTDVRSVCKETYSIYKAALKSKGSINDYNQIAQLRIVVKPKPSVGV 416

Query: 416 GPLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEV 475
           GPLCSPQQICYHVLGLVH IW PIPR +KDYIATPKPNGYQSLHTT+IPFLYESMFRLEV
Sbjct: 417 GPLCSPQQICYHVLGLVHEIWKPIPRTVKDYIATPKPNGYQSLHTTVIPFLYESMFRLEV 476

Query: 476 QIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNA 535
           QIRTEEMDLIAERGIA +Y+G+   TGLVG+A P GR+ RGKT CLNNA+ ALR+ WLNA
Sbjct: 477 QIRTEEMDLIAERGIAVYYNGKSLSTGLVGNAVPLGRNSRGKTGCLNNADFALRVGWLNA 536

Query: 536 IREWQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIG 595
           IREWQEEFVGNM+SREFVDTITRDLLGSRVFVFTP+GEIKNLPKGATVVDYAY+IHTEIG
Sbjct: 537 IREWQEEFVGNMSSREFVDTITRDLLGSRVFVFTPKGEIKNLPKGATVVDYAYLIHTEIG 596

Query: 596 NKMVAAKVNGNLVSPTHVLANAEVVEIITYN 626
           NKMVAAKVNGNLVSPTHVL NAEVVEI+TYN
Sbjct: 597 NKMVAAKVNGNLVSPTHVLENAEVVEIVTYN 627


>gi|18411893|ref|NP_567226.1| RelA-SpoT like protein RSH1 [Arabidopsis thaliana]
 gi|7141304|gb|AAF37281.1| RSH1 [Arabidopsis thaliana]
 gi|332656747|gb|AEE82147.1| RelA-SpoT like protein RSH1 [Arabidopsis thaliana]
          Length = 883

 Score =  980 bits (2533), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 488/631 (77%), Positives = 538/631 (85%), Gaps = 9/631 (1%)

Query: 1   MASAASMSVSVECVNICKLPKGDGSGRYYDCSVLSCAWKAPRALTGFLASTTHPAHSSSL 60
           M SA+SMSVSVECVNIC L KGDG+ R  DCS LSCAWKAPRALTGFLAST HP   S  
Sbjct: 1   MTSASSMSVSVECVNICNLTKGDGNARS-DCSALSCAWKAPRALTGFLASTAHPPVCSVY 59

Query: 61  SLGPTGRRNRINS----RCEAFDVGSWCTEGSDLVLLGKLPRSSLLHVACKRWRL-CLSP 115
           S G  GR++R+ +    R E ++VG   +E    V +  + +S L     KRW L C+S 
Sbjct: 60  SCGRNGRKSRMKACAWQRYE-YEVG--FSEAPYFVNVRNILKSRLSCGGHKRWELYCVSA 116

Query: 116 SVSSDAFKEDSPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHP 175
             SS A  + + E LWEDL P+ISYL   ELE V++ L LAFEAH GQKRRSGEPFIIHP
Sbjct: 117 ESSSGASSDVTVETLWEDLFPSISYLPRKELEFVQKGLKLAFEAHHGQKRRSGEPFIIHP 176

Query: 176 VEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGK 235
           V VARILGELELDWESI AGLLHDTVEDTN +TFE+IEEEFGATVR IVEGETKVSKLGK
Sbjct: 177 VAVARILGELELDWESIVAGLLHDTVEDTNFITFEKIEEEFGATVRHIVEGETKVSKLGK 236

Query: 236 LKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATE 295
           LKCK E+ ++QDVKADDLRQMFLAMT+EVRVIIVKLADRLHNMRTL HMPPHKQSSIA E
Sbjct: 237 LKCKTESETIQDVKADDLRQMFLAMTDEVRVIIVKLADRLHNMRTLCHMPPHKQSSIAGE 296

Query: 296 TLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILM 355
           TLQVFAPLAKLLGMY IKSELENLSFMY +AEDY +V  R+A+LYKEHEKEL EAN+IL+
Sbjct: 297 TLQVFAPLAKLLGMYSIKSELENLSFMYVSAEDYDRVTSRIANLYKEHEKELTEANRILV 356

Query: 356 KKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGV 415
           KKIEDDQFLDL+TV T++RSVCKE YSIYKA LKS+GSIN+ NQIAQLRI++KPKP  GV
Sbjct: 357 KKIEDDQFLDLVTVNTDVRSVCKETYSIYKAALKSKGSINDYNQIAQLRIVVKPKPSVGV 416

Query: 416 GPLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEV 475
           GPLCSPQQICYHVLGLVH IW PIPR +KDYIATPKPNGYQSLHTT+IPFLYESMFRLEV
Sbjct: 417 GPLCSPQQICYHVLGLVHEIWKPIPRTVKDYIATPKPNGYQSLHTTVIPFLYESMFRLEV 476

Query: 476 QIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNA 535
           QIRTEEMDLIAERGIA +Y+G+   TGLVG+A P GR+ RGKT CLNNA+ ALR+ WLNA
Sbjct: 477 QIRTEEMDLIAERGIAVYYNGKSLSTGLVGNAVPLGRNSRGKTGCLNNADFALRVGWLNA 536

Query: 536 IREWQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIG 595
           IREWQEEFVGNM+SREFVDTITRDLLGSRVFVFTP+GEIKNLPKGATVVDYAY+IHTEIG
Sbjct: 537 IREWQEEFVGNMSSREFVDTITRDLLGSRVFVFTPKGEIKNLPKGATVVDYAYLIHTEIG 596

Query: 596 NKMVAAKVNGNLVSPTHVLANAEVVEIITYN 626
           NKMVAAKVNGNLVSPTHVL NAEVVEI+TYN
Sbjct: 597 NKMVAAKVNGNLVSPTHVLENAEVVEIVTYN 627


>gi|42570124|ref|NP_849287.2| RelA-SpoT like protein RSH1 [Arabidopsis thaliana]
 gi|332656748|gb|AEE82148.1| RelA-SpoT like protein RSH1 [Arabidopsis thaliana]
          Length = 884

 Score =  976 bits (2522), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 488/632 (77%), Positives = 538/632 (85%), Gaps = 10/632 (1%)

Query: 1   MASAASMSVSVECVNICKLPKGDGSGRYYDCSVLSCAWKAPRALTGFLASTTHPAHSSSL 60
           M SA+SMSVSVECVNIC L KGDG+ R  DCS LSCAWKAPRALTGFLAST HP   S  
Sbjct: 1   MTSASSMSVSVECVNICNLTKGDGNARS-DCSALSCAWKAPRALTGFLASTAHPPVCSVY 59

Query: 61  SLGPTGRRNRINS----RCEAFDVGSWCTEGSDLVLLGKLPRSSLLHVACKRWRL-CLSP 115
           S G  GR++R+ +    R E ++VG   +E    V +  + +S L     KRW L C+S 
Sbjct: 60  SCGRNGRKSRMKACAWQRYE-YEVG--FSEAPYFVNVRNILKSRLSCGGHKRWELYCVSA 116

Query: 116 SVSSDAFKEDSPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHP 175
             SS A  + + E LWEDL P+ISYL   ELE V++ L LAFEAH GQKRRSGEPFIIHP
Sbjct: 117 ESSSGASSDVTVETLWEDLFPSISYLPRKELEFVQKGLKLAFEAHHGQKRRSGEPFIIHP 176

Query: 176 VEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGK 235
           V VARILGELELDWESI AGLLHDTVEDTN +TFE+IEEEFGATVR IVEGETKVSKLGK
Sbjct: 177 VAVARILGELELDWESIVAGLLHDTVEDTNFITFEKIEEEFGATVRHIVEGETKVSKLGK 236

Query: 236 LKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATE 295
           LKCK E+ ++QDVKADDLRQMFLAMT+EVRVIIVKLADRLHNMRTL HMPPHKQSSIA E
Sbjct: 237 LKCKTESETIQDVKADDLRQMFLAMTDEVRVIIVKLADRLHNMRTLCHMPPHKQSSIAGE 296

Query: 296 TLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILM 355
           TLQVFAPLAKLLGMY IKSELENLSFMY +AEDY +V  R+A+LYKEHEKEL EAN+IL+
Sbjct: 297 TLQVFAPLAKLLGMYSIKSELENLSFMYVSAEDYDRVTSRIANLYKEHEKELTEANRILV 356

Query: 356 KKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIA-QLRIIIKPKPCSG 414
           KKIEDDQFLDL+TV T++RSVCKE YSIYKA LKS+GSIN+ NQIA QLRI++KPKP  G
Sbjct: 357 KKIEDDQFLDLVTVNTDVRSVCKETYSIYKAALKSKGSINDYNQIAQQLRIVVKPKPSVG 416

Query: 415 VGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLE 474
           VGPLCSPQQICYHVLGLVH IW PIPR +KDYIATPKPNGYQSLHTT+IPFLYESMFRLE
Sbjct: 417 VGPLCSPQQICYHVLGLVHEIWKPIPRTVKDYIATPKPNGYQSLHTTVIPFLYESMFRLE 476

Query: 475 VQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLN 534
           VQIRTEEMDLIAERGIA +Y+G+   TGLVG+A P GR+ RGKT CLNNA+ ALR+ WLN
Sbjct: 477 VQIRTEEMDLIAERGIAVYYNGKSLSTGLVGNAVPLGRNSRGKTGCLNNADFALRVGWLN 536

Query: 535 AIREWQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEI 594
           AIREWQEEFVGNM+SREFVDTITRDLLGSRVFVFTP+GEIKNLPKGATVVDYAY+IHTEI
Sbjct: 537 AIREWQEEFVGNMSSREFVDTITRDLLGSRVFVFTPKGEIKNLPKGATVVDYAYLIHTEI 596

Query: 595 GNKMVAAKVNGNLVSPTHVLANAEVVEIITYN 626
           GNKMVAAKVNGNLVSPTHVL NAEVVEI+TYN
Sbjct: 597 GNKMVAAKVNGNLVSPTHVLENAEVVEIVTYN 628


>gi|110742286|dbj|BAE99068.1| RSH1 [Arabidopsis thaliana]
          Length = 884

 Score =  973 bits (2514), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 487/632 (77%), Positives = 537/632 (84%), Gaps = 10/632 (1%)

Query: 1   MASAASMSVSVECVNICKLPKGDGSGRYYDCSVLSCAWKAPRALTGFLASTTHPAHSSSL 60
           M SA+SMSVSVECVNIC L KGDG+ R  DCS LSCAWKAPRALTGFLAST HP   S  
Sbjct: 1   MTSASSMSVSVECVNICNLTKGDGNARS-DCSALSCAWKAPRALTGFLASTAHPPVCSVY 59

Query: 61  SLGPTGRRNRINS----RCEAFDVGSWCTEGSDLVLLGKLPRSSLLHVACKRWRL-CLSP 115
           S G  GR++R+ +    R E ++VG   +E    V +  + +S L     KRW L C+S 
Sbjct: 60  SCGRNGRKSRMKACAWQRYE-YEVG--FSEAPYFVNVRNILKSRLSCGGHKRWELYCVSA 116

Query: 116 SVSSDAFKEDSPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHP 175
             SS A  + + E LWEDL P+ISYL   ELE V++ L LAFEAH GQKRRSGEPFIIHP
Sbjct: 117 ESSSGASSDVTVETLWEDLFPSISYLPRKELEFVQKGLKLAFEAHHGQKRRSGEPFIIHP 176

Query: 176 VEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGK 235
           V VARILGELELDWESI AGLLHDTVEDTN +TFE+IEEEFGATVR IVEGETKVSKLGK
Sbjct: 177 VAVARILGELELDWESIVAGLLHDTVEDTNFITFEKIEEEFGATVRHIVEGETKVSKLGK 236

Query: 236 LKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATE 295
           LKCK E+ ++QDVKADDLRQMFLAMT+EVRVIIVKLADRLHNMRTL HMPPHKQSSIA E
Sbjct: 237 LKCKTESETIQDVKADDLRQMFLAMTDEVRVIIVKLADRLHNMRTLCHMPPHKQSSIAGE 296

Query: 296 TLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILM 355
           TLQVFAPLAKLLGMY IKSELENLSFMY +AEDY +V  R+A+LYKEHEKEL EAN+IL+
Sbjct: 297 TLQVFAPLAKLLGMYSIKSELENLSFMYVSAEDYDRVTSRIANLYKEHEKELTEANRILV 356

Query: 356 KKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIA-QLRIIIKPKPCSG 414
           KKIEDDQFLDL+TV T++RSVCKE YSIYKA LKS+GSIN+ NQIA QLRI++KPKP  G
Sbjct: 357 KKIEDDQFLDLVTVNTDVRSVCKETYSIYKAALKSKGSINDYNQIAQQLRIVVKPKPSVG 416

Query: 415 VGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLE 474
           VGPLCSPQQICYHVLGLVH IW PIPR +KDYIATPKPNGYQSLHTT+IPFLYESMFRLE
Sbjct: 417 VGPLCSPQQICYHVLGLVHEIWKPIPRTVKDYIATPKPNGYQSLHTTVIPFLYESMFRLE 476

Query: 475 VQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLN 534
           VQIRTEEMDLIAER IA +Y+G+   TGLVG+A P GR+ RGKT CLNNA+ ALR+ WLN
Sbjct: 477 VQIRTEEMDLIAERDIAVYYNGKSLSTGLVGNAVPLGRNSRGKTGCLNNADFALRVGWLN 536

Query: 535 AIREWQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEI 594
           AIREWQEEFVGNM+SREFVDTITRDLLGSRVFVFTP+GEIKNLPKGATVVDYAY+IHTEI
Sbjct: 537 AIREWQEEFVGNMSSREFVDTITRDLLGSRVFVFTPKGEIKNLPKGATVVDYAYLIHTEI 596

Query: 595 GNKMVAAKVNGNLVSPTHVLANAEVVEIITYN 626
           GNKMVAAKVNGNLVSPTHVL NAEVVEI+TYN
Sbjct: 597 GNKMVAAKVNGNLVSPTHVLENAEVVEIVTYN 628


>gi|115452933|ref|NP_001050067.1| Os03g0340900 [Oryza sativa Japonica Group]
 gi|12583661|dbj|BAB21484.1| chloroplast RelA homologue 1 [Oryza sativa Japonica Group]
 gi|108708064|gb|ABF95859.1| RelA/SpoT protein, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113548538|dbj|BAF11981.1| Os03g0340900 [Oryza sativa Japonica Group]
 gi|222624902|gb|EEE59034.1| hypothetical protein OsJ_10786 [Oryza sativa Japonica Group]
          Length = 892

 Score =  903 bits (2333), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 453/616 (73%), Positives = 504/616 (81%), Gaps = 17/616 (2%)

Query: 24  GSGRYYDCSVLSCAWKAPRALTGFLASTTHPAHSSSLSLGPTGRRNRINSRCEAFDVG-- 81
           G GR Y+CSVLSCAW APRALTG LASTT    S S +    G R R  S+     +   
Sbjct: 28  GGGRPYECSVLSCAWNAPRALTGALASTTAQCSSCSHAEAGAGWRRRGQSQRSNNSLLHI 87

Query: 82  SWCTEGSDLVLLGKLPRSSLLHVA-----CKRWRLCLSPS------VSSDAFKEDSPERL 130
           +W  EG   +  GK    S  H        K W   + P+       SS++F   SPE L
Sbjct: 88  TW-AEG---INRGKFGYGSSAHSFPTGNFFKSWSTSVDPTWRVFCYSSSESFNHISPETL 143

Query: 131 WEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWE 190
           WEDL+P ISYL P EL  V  AL LA+EAH+GQKRRSGEPFIIHPVEVARILGE ELDWE
Sbjct: 144 WEDLKPAISYLQPEELNFVHDALKLAYEAHNGQKRRSGEPFIIHPVEVARILGEHELDWE 203

Query: 191 SIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKA 250
           SIAAGLLHDTVEDT++VTFERIE EFG TVRRIVEGETKVSKLGKL+CKNE +S QDVKA
Sbjct: 204 SIAAGLLHDTVEDTDMVTFERIENEFGVTVRRIVEGETKVSKLGKLQCKNEGNSKQDVKA 263

Query: 251 DDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMY 310
           +DLRQMFLAMTEEVRVIIVKLADRLHNMRTL+HMP HKQ +IA ETLQVFAPLAKLLGMY
Sbjct: 264 EDLRQMFLAMTEEVRVIIVKLADRLHNMRTLTHMPQHKQYAIAMETLQVFAPLAKLLGMY 323

Query: 311 QIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVK 370
           +IKSELE LSFMY N  D+A++K+RV DLYK HE+ELEEAN+IL +KI +DQFLDL++V+
Sbjct: 324 RIKSELEYLSFMYMNPGDFAELKKRVEDLYKAHEQELEEANQILGEKIAEDQFLDLVSVE 383

Query: 371 TEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLG 430
           T++RSVCKE YSIYK  LKS+ SINE+NQ+AQLRIIIKPK C+GVGPLC+ QQICYHVLG
Sbjct: 384 TQVRSVCKELYSIYKTALKSKSSINEINQVAQLRIIIKPKSCNGVGPLCTAQQICYHVLG 443

Query: 431 LVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGI 490
           LVHGIWTPIP+A+KDYIATPKPNGYQSLHTT+IPFL ESMF LEVQIRTE+MDLIAERGI
Sbjct: 444 LVHGIWTPIPQAVKDYIATPKPNGYQSLHTTVIPFLNESMFHLEVQIRTEDMDLIAERGI 503

Query: 491 AAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSR 550
           AAHYSGR  V+G V     +GR+  GK +CLNN   ALRI WLNAIREWQEEFVGNM+SR
Sbjct: 504 AAHYSGRGVVSGPVRPGISSGRNSNGKVICLNNTGFALRIGWLNAIREWQEEFVGNMSSR 563

Query: 551 EFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSP 610
           EFVDTITRDLLGSRVFVFTP+GEIKNLPKGATVVDYAY+IHTEIGNKMVAAKVNGNLVSP
Sbjct: 564 EFVDTITRDLLGSRVFVFTPKGEIKNLPKGATVVDYAYLIHTEIGNKMVAAKVNGNLVSP 623

Query: 611 THVLANAEVVEIITYN 626
            HVLANAEVVEII Y+
Sbjct: 624 IHVLANAEVVEIIIYD 639


>gi|357112304|ref|XP_003557949.1| PREDICTED: GTP pyrophosphokinase-like [Brachypodium distachyon]
          Length = 890

 Score =  895 bits (2314), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 452/635 (71%), Positives = 512/635 (80%), Gaps = 13/635 (2%)

Query: 3   SAASMSVSVECVNICKLP-KGDGSGRYYDCSVLSCAWKAPRALTGFLASTTHPAHSSSLS 61
           +AA  + S+EC++ C+   KG G GR Y+CSVLSCAW APRALTG LASTT  +  S   
Sbjct: 5   TAAVSASSMECMSSCRASWKGVGGGRPYECSVLSCAWNAPRALTGSLASTTQCSSCSHAE 64

Query: 62  LGPTGRRNRINSRCEAFDVGSWCTEGSDLVLLGKLPRSSLLHVACK----------RWRL 111
            G   RR   + R     +   C E  +   L + P +S +    K           W++
Sbjct: 65  AGGGWRRRGRSRRSNNTLLHVTCAEDVNKGKLCQGPPASFVSSGKKFGSWSTPVESTWKV 124

Query: 112 CLSPSVSSDAFKEDSPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPF 171
             S   SS+     SPE LWE LRP ISYL P EL  V  AL LA+EAH+GQKRRSGEPF
Sbjct: 125 --SCHSSSEPLNLVSPETLWEGLRPAISYLQPEELNFVHDALKLAYEAHNGQKRRSGEPF 182

Query: 172 IIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVS 231
           IIHPVEVARILGE ELDWESIAAGLLHDTVEDT++VTFE I+ EFGATVRRIVEGETKVS
Sbjct: 183 IIHPVEVARILGEHELDWESIAAGLLHDTVEDTDMVTFETIQNEFGATVRRIVEGETKVS 242

Query: 232 KLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSS 291
           KLGKL+CKNE  S QDVKA+DLRQMFLAMTEEVRVIIVKLADRLHNMRTL+HMP HKQ +
Sbjct: 243 KLGKLQCKNECSSKQDVKAEDLRQMFLAMTEEVRVIIVKLADRLHNMRTLTHMPQHKQYA 302

Query: 292 IATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEAN 351
           IA ETLQVFAPLAKLLGMYQIKSELE LSFMY N  D+ ++++RV D++K HE+ELEEAN
Sbjct: 303 IAMETLQVFAPLAKLLGMYQIKSELEYLSFMYMNPGDFTELRKRVEDIFKAHEQELEEAN 362

Query: 352 KILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKP 411
           +IL +KI +DQFLDL++V+TE+RSVCKE YSIY+  LKS+ SINEVNQ+AQLRIIIKPK 
Sbjct: 363 RILKQKIAEDQFLDLVSVETEVRSVCKELYSIYRTALKSKSSINEVNQVAQLRIIIKPKS 422

Query: 412 CSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMF 471
           C+GVGPLC+ QQICYHVLGLVHGIWTPIP+A+KDYIATPKPNGYQSLHTT+IPFL ESMF
Sbjct: 423 CNGVGPLCTAQQICYHVLGLVHGIWTPIPQAVKDYIATPKPNGYQSLHTTVIPFLNESMF 482

Query: 472 RLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRIS 531
            LEVQIRTE+MD+IAERGIAAHYSGR  V+G V     +GR+  GK +CLNN   ALRI 
Sbjct: 483 HLEVQIRTEDMDMIAERGIAAHYSGRGVVSGPVRPGISSGRNSDGKVICLNNTGFALRIG 542

Query: 532 WLNAIREWQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIH 591
           WLNAIREWQEEFVGNM+SREFVDTITRDLLGSRVFVFTP+GEIKNLPKGATV+DYAY+IH
Sbjct: 543 WLNAIREWQEEFVGNMSSREFVDTITRDLLGSRVFVFTPKGEIKNLPKGATVIDYAYLIH 602

Query: 592 TEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITYN 626
           TEIGNKMVAAKVNGNLVSP H LANAEVVEIITY+
Sbjct: 603 TEIGNKMVAAKVNGNLVSPIHALANAEVVEIITYD 637


>gi|242040981|ref|XP_002467885.1| hypothetical protein SORBIDRAFT_01g035870 [Sorghum bicolor]
 gi|241921739|gb|EER94883.1| hypothetical protein SORBIDRAFT_01g035870 [Sorghum bicolor]
          Length = 889

 Score =  892 bits (2304), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 448/633 (70%), Positives = 503/633 (79%), Gaps = 17/633 (2%)

Query: 5   ASMSVSVECVNICKLPKGDGSGRYYDCSVLSCAWKAPRALTGFLASTTH-----PAHSSS 59
            + S S+ECV+ C      G GR Y+CSVLSCAW APRALTG LAST        A +  
Sbjct: 10  GAASSSLECVSSCTAASWKGGGRPYECSVLSCAWNAPRALTGALASTAQCSSCGHAEAGG 69

Query: 60  LSLGPTGRRNRINSRCE-AFDVGSWCTEGSDLVLLGKLPRSSLLHVACKRWRLCLSPSVS 118
                   R   NS     FD      E  +    G  P  +      + W   + P+  
Sbjct: 70  GWRRRGRSRRSNNSLLHITFD------EDINRGKFGYDPSPAYSASFVRPWSTTVDPTWR 123

Query: 119 SDAFKED-----SPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFII 173
           +  +        SPE LWEDL+P +SYL P EL  VR AL LA+EAH GQKRRSGEPFII
Sbjct: 124 AYCYSSSESFIISPETLWEDLKPAVSYLQPEELNFVRDALKLAYEAHSGQKRRSGEPFII 183

Query: 174 HPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKL 233
           HPVEVARILGE ELDWESIAAGLLHDTVEDT+VVTFERIE EFG TVRRIVEGETKVSKL
Sbjct: 184 HPVEVARILGEHELDWESIAAGLLHDTVEDTDVVTFERIENEFGPTVRRIVEGETKVSKL 243

Query: 234 GKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIA 293
           GKL+CK+E  S QD+KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTL+HMP HKQ +IA
Sbjct: 244 GKLQCKSEGSSKQDLKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLTHMPQHKQYAIA 303

Query: 294 TETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKI 353
            ETLQVFAPLAKLLGMY+IKSELE LSFMY N   +A++++RV DLYK HE+ELEEAN+I
Sbjct: 304 METLQVFAPLAKLLGMYRIKSELEYLSFMYVNPTGFAELRKRVEDLYKAHEQELEEANRI 363

Query: 354 LMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCS 413
           L +KI +DQFLDL++V+TE+RSV KE YSIYK+ LKS+ SINEVNQ+AQLRIIIKPK C+
Sbjct: 364 LRQKIVEDQFLDLVSVETEVRSVYKELYSIYKSTLKSKSSINEVNQVAQLRIIIKPKSCN 423

Query: 414 GVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRL 473
           GVGPLC+ QQICYHVLGLVHGIWTPIP+A+KDYIATPKPNGYQSLHTT+IPFL ESMF L
Sbjct: 424 GVGPLCTAQQICYHVLGLVHGIWTPIPQAVKDYIATPKPNGYQSLHTTVIPFLNESMFHL 483

Query: 474 EVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWL 533
           EVQIRTE+MDLIAERGIAAHYSGR  V+G V     +GR+ +GK +CLNN   ALRI WL
Sbjct: 484 EVQIRTEDMDLIAERGIAAHYSGRGVVSGPVRPGISSGRNAKGKVICLNNTGFALRIGWL 543

Query: 534 NAIREWQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTE 593
           NAIREWQEEFVGNM+SREFVDTITRDLLGSRVFVFTP+GEIKNLP+GATVVDYAY+IHTE
Sbjct: 544 NAIREWQEEFVGNMSSREFVDTITRDLLGSRVFVFTPKGEIKNLPEGATVVDYAYLIHTE 603

Query: 594 IGNKMVAAKVNGNLVSPTHVLANAEVVEIITYN 626
           IGNKM+AAKVNGNLVSP HVLANAEVVEIITY+
Sbjct: 604 IGNKMIAAKVNGNLVSPIHVLANAEVVEIITYD 636


>gi|148905795|gb|ABR16061.1| unknown [Picea sitchensis]
          Length = 901

 Score =  883 bits (2282), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 449/643 (69%), Positives = 509/643 (79%), Gaps = 15/643 (2%)

Query: 1   MASAASMSVSVECVNICKLPKGDGSGRYYDCSVLSCAWKAPRALTGFLASTTH--PAHSS 58
           MAS + +SVS E VN CK+ K D +G   +CS+LSCAWKAPRAL+G  ASTT   P+ + 
Sbjct: 1   MASTSFLSVSFEAVNACKVIKLD-TGSRSECSILSCAWKAPRALSGSFASTTQSRPSSAD 59

Query: 59  SLSLGPTGRRNRINSRCEAF-----DV---GSWCTEGSDLVLLGKLPRSSLLHVACKRWR 110
              L  +   NR + +C  +     DV   G  C +  D V   K  R  L   A  RWR
Sbjct: 60  GDGLRKSTGTNR-SHQCARYVACSDDVPLMGESCCKFVDDVAHLKTYRLRLRTRAHMRWR 118

Query: 111 LCLSPSVSSDAFKEDSPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEP 170
            C S + S +     + + LWE L+P ISYLS   L LV+ AL LAFEAHDGQKRRSGEP
Sbjct: 119 ACYSSNSSPEYPDTVTVKTLWEVLKPAISYLSSAHLRLVKDALKLAFEAHDGQKRRSGEP 178

Query: 171 FIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKV 230
           FIIHPVEVARILGELELDWESIAAGLLHDTVED+NVVTFERIEEEFG  VRRIVEGETKV
Sbjct: 179 FIIHPVEVARILGELELDWESIAAGLLHDTVEDSNVVTFERIEEEFGPVVRRIVEGETKV 238

Query: 231 SKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQS 290
           SKLGKL+C +  +SVQDVKA+DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQ 
Sbjct: 239 SKLGKLQCTDLKNSVQDVKANDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQC 298

Query: 291 SIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEA 350
           SIA+ETL++FAPLAKLLGMYQIKSELE LSFMYTN + +A +KRRV  L KE EKEL EA
Sbjct: 299 SIASETLKIFAPLAKLLGMYQIKSELETLSFMYTNPDKFADLKRRVEQLNKEQEKELSEA 358

Query: 351 NKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPK 410
            +IL++KIE+DQFLD M++  E+ SVCKE YSIYK +L+  GSIN+VN+IAQLR+I+KPK
Sbjct: 359 KRILVQKIEEDQFLDFMSMDVEVLSVCKELYSIYKMLLEREGSINKVNEIAQLRVILKPK 418

Query: 411 PCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESM 470
            C  V PLCS QQICYH+LGLVHGIWTPIPR MKDYIATPKPNGYQSL T +IPFL ES 
Sbjct: 419 QCDRVAPLCSSQQICYHILGLVHGIWTPIPREMKDYIATPKPNGYQSLQTKVIPFLNEST 478

Query: 471 FRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRI 530
           FR+EVQIRTEEMD IA+RGIA HYSG+   +   G AR NGR  RGK  CLN+A+IA R+
Sbjct: 479 FRVEVQIRTEEMDCIAQRGIAVHYSGKGITS---GSARTNGRILRGKATCLNSADIARRV 535

Query: 531 SWLNAIREWQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMI 590
           SWLNAIREWQEEFVGNM+SREFVDT+T DLLGSRVFVFTP+GEIKNLPKGATVVDYAY +
Sbjct: 536 SWLNAIREWQEEFVGNMSSREFVDTVTGDLLGSRVFVFTPKGEIKNLPKGATVVDYAYQV 595

Query: 591 HTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITYNVSFSLTI 633
           HTEIGNKM+AAKVNGN VSP H LANAEVVEIITY+   S T+
Sbjct: 596 HTEIGNKMIAAKVNGNPVSPMHTLANAEVVEIITYDGLSSKTV 638


>gi|326522797|dbj|BAJ88444.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 891

 Score =  882 bits (2279), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 449/645 (69%), Positives = 512/645 (79%), Gaps = 32/645 (4%)

Query: 3   SAASMSVSVECVNICK--LPKGDGSGRYYDCSVLSCAWKAPRALTGFLASTTHPA---HS 57
           ++A  ++S+EC + C+     G G+GR Y+CSVLSCAW APRALTG LASTT  +   H+
Sbjct: 5   TSALSALSLECASSCRPLWKGGGGAGRPYECSVLSCAWNAPRALTGALASTTQCSSCSHA 64

Query: 58  SSLSLGPTGRRNRINSRCEAFDVGSWCTE----------GSDLVLLGK------LPRSSL 101
            ++  G    R R ++      + +W  E           +  V  GK       P  S+
Sbjct: 65  EAVGGGRWRGRPRQSNNNTLLHI-TWPEETNKGKLGHGSSASFVSSGKKIRYWSTPVKSM 123

Query: 102 LHVACKRWRLCLSPSVSSDAFKEDSPERLWEDLRPTISYLSPNELELVRRALMLAFEAHD 161
             V+C           SS+ F   SPE LWE LRP ISYL P EL  V  AL LA+EAH+
Sbjct: 124 WRVSC----------YSSEPFDLVSPETLWESLRPAISYLQPEELNFVHDALKLAYEAHN 173

Query: 162 GQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVR 221
           GQKRRSGEPFIIHPVEVARILGE ELDWESIAAGLLHDTVEDT++VTFE I+ EFGATV 
Sbjct: 174 GQKRRSGEPFIIHPVEVARILGEHELDWESIAAGLLHDTVEDTDMVTFEAIQNEFGATVC 233

Query: 222 RIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTL 281
           RIVEGETKVSKLGKL+CKNE  S QDVKA+DLRQMFLAMTEEVRVIIVKLADRLHNMRTL
Sbjct: 234 RIVEGETKVSKLGKLQCKNEGSSKQDVKAEDLRQMFLAMTEEVRVIIVKLADRLHNMRTL 293

Query: 282 SHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYK 341
           +HMP HKQ +IA ETLQVFAPLAKLLGMYQIKSELE LSFMY N  D+A++++RV D++K
Sbjct: 294 THMPQHKQYAIAMETLQVFAPLAKLLGMYQIKSELEYLSFMYMNPGDFAELRKRVEDIFK 353

Query: 342 EHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIA 401
            HE+ELEEANK L +KI +DQFLDL++V+TE+RSVCKE YSIYK  LKS+ S+NEVNQ+A
Sbjct: 354 AHEQELEEANKTLKQKIAEDQFLDLVSVETEVRSVCKELYSIYKTALKSKSSLNEVNQVA 413

Query: 402 QLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTT 461
           QLRIIIKPK C+GVGPLC+ QQICYHVLGLVH IWTPIP+A+KDYIATPKPNGYQSLHTT
Sbjct: 414 QLRIIIKPKSCNGVGPLCTAQQICYHVLGLVHCIWTPIPQAVKDYIATPKPNGYQSLHTT 473

Query: 462 LIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCL 521
           +IPFL ESMF LEVQIRTE+MDLIAERGIAAHYSG   V+G V     +GR+  GK +CL
Sbjct: 474 VIPFLNESMFHLEVQIRTEDMDLIAERGIAAHYSGIGVVSGPVCPGISSGRNLDGKVICL 533

Query: 522 NNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGA 581
           +N   ALRI WLNAIREWQEEFVGNM+SREFVDTITRDLLGSRVFVFTP+GEIKNLPKGA
Sbjct: 534 SNTGFALRIGWLNAIREWQEEFVGNMSSREFVDTITRDLLGSRVFVFTPKGEIKNLPKGA 593

Query: 582 TVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITYN 626
           TV+DYAY+IHTEIGNKMVAAKVNGNLVSP H LANAEVVEIITY+
Sbjct: 594 TVIDYAYLIHTEIGNKMVAAKVNGNLVSPIHALANAEVVEIITYD 638


>gi|7268986|emb|CAB80719.1| putative GTP pyrophosphokinase [Arabidopsis thaliana]
          Length = 816

 Score =  840 bits (2170), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 436/623 (69%), Positives = 485/623 (77%), Gaps = 60/623 (9%)

Query: 10  SVECVNICKLPKGDGSGRYYDCSVLSCAWKAPRALTGFLASTTHPAHSSSLSLGPTGRRN 69
           SVECVNIC L KGDG+ R  DCS LSCAWKAPRALTGFLAST HP   S  S G  GR++
Sbjct: 1   SVECVNICNLTKGDGNARS-DCSALSCAWKAPRALTGFLASTAHPPVCSVYSCGRNGRKS 59

Query: 70  RINS----RCEAFDVGSWCTEGSDLVLLGKLPRSSLLHVACKRWRL-CLSPSVSSDAFKE 124
           R+ +    R E ++VG   +E    V +  + +S L     KRW L C+S   SS A  +
Sbjct: 60  RMKACAWQRYE-YEVG--FSEAPYFVNVRNILKSRLSCGGHKRWELYCVSAESSSGASSD 116

Query: 125 DSPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
            + E LWEDL P+ISYL   ELE V++ L                               
Sbjct: 117 VTVETLWEDLFPSISYLPRKELEFVQKGLK------------------------------ 146

Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
            ELDWESI AGLLHDTVEDTN +TFE+IEEEFGATVR IVEGETKVSKLGKLKCK E+ +
Sbjct: 147 -ELDWESIVAGLLHDTVEDTNFITFEKIEEEFGATVRHIVEGETKVSKLGKLKCKTESET 205

Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
           +QDVKADDLRQMFLAMT+EVRVIIVKLADRLHNMRTL HMPPHKQSSIA ETLQVFAPLA
Sbjct: 206 IQDVKADDLRQMFLAMTDEVRVIIVKLADRLHNMRTLCHMPPHKQSSIAGETLQVFAPLA 265

Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
           KLLGMY IKSELENLSFMY +AEDY +V  R+A+LYKEHEKEL EAN+IL+KKIEDDQFL
Sbjct: 266 KLLGMYSIKSELENLSFMYVSAEDYDRVTSRIANLYKEHEKELTEANRILVKKIEDDQFL 325

Query: 365 DLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIA-QLRIIIKPKPCSGVGPLCSPQQ 423
           DL+TV T++RSVCKE YSIYKA LKS+GSIN+ NQIA QLRI++KPKP  GVGPLCSPQQ
Sbjct: 326 DLVTVNTDVRSVCKETYSIYKAALKSKGSINDYNQIAQQLRIVVKPKPSVGVGPLCSPQQ 385

Query: 424 ICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMD 483
           +                   KDYIATPKPNGYQSLHTT+IPFLYESMFRLEVQIRTEEMD
Sbjct: 386 V-------------------KDYIATPKPNGYQSLHTTVIPFLYESMFRLEVQIRTEEMD 426

Query: 484 LIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEF 543
           LIAERGIA +Y+G+   TGLVG+A P GR+ RGKT CLNNA+ ALR+ WLNAIREWQEEF
Sbjct: 427 LIAERGIAVYYNGKSLSTGLVGNAVPLGRNSRGKTGCLNNADFALRVGWLNAIREWQEEF 486

Query: 544 VGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKV 603
           VGNM+SREFVDTITRDLLGSRVFVFTP+GEIKNLPKGATVVDYAY+IHTEIGNKMVAAKV
Sbjct: 487 VGNMSSREFVDTITRDLLGSRVFVFTPKGEIKNLPKGATVVDYAYLIHTEIGNKMVAAKV 546

Query: 604 NGNLVSPTHVLANAEVVEIITYN 626
           NGNLVSPTHVL NAEVVEI+TYN
Sbjct: 547 NGNLVSPTHVLENAEVVEIVTYN 569


>gi|218192804|gb|EEC75231.1| hypothetical protein OsI_11504 [Oryza sativa Indica Group]
          Length = 761

 Score =  806 bits (2081), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 384/470 (81%), Positives = 424/470 (90%)

Query: 133 DLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESI 192
           DL+P ISYL P EL  V  AL LA+EAH+GQKRRSGEPFIIHPVEVARILGE ELDWESI
Sbjct: 25  DLKPAISYLQPEELNFVHDALKLAYEAHNGQKRRSGEPFIIHPVEVARILGEHELDWESI 84

Query: 193 AAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADD 252
           AAGLLHDTVEDT++VTFERIE EFG TVRRIVEGETKVSKLGKL+CKNE +S QDVKA+D
Sbjct: 85  AAGLLHDTVEDTDMVTFERIENEFGVTVRRIVEGETKVSKLGKLQCKNEGNSKQDVKAED 144

Query: 253 LRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQI 312
           LRQMFLAMTEEVRVIIVKLADRLHNMRTL+HMP HKQ +IA ETLQVFAPLAKLLGMY+I
Sbjct: 145 LRQMFLAMTEEVRVIIVKLADRLHNMRTLTHMPQHKQYAIAMETLQVFAPLAKLLGMYRI 204

Query: 313 KSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTE 372
           KSELE LSFMY N  D+A++K+RV DLYK HE+ELEEAN+IL +KI +DQFLDL++V+T+
Sbjct: 205 KSELEYLSFMYMNPGDFAELKKRVEDLYKAHEQELEEANQILGEKIAEDQFLDLVSVETQ 264

Query: 373 IRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLV 432
           +RSVCKE YSIYK VLKS+ SINE+NQ+AQLRIIIKPK C+GVGPLC+ QQICYHVLGLV
Sbjct: 265 VRSVCKELYSIYKTVLKSKSSINEINQVAQLRIIIKPKSCNGVGPLCTAQQICYHVLGLV 324

Query: 433 HGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAA 492
           HGIWTPIP+A+KDYIATPKPNGYQSLHTT+IPFL ESMF LEVQIRTE+MDLIAERGIAA
Sbjct: 325 HGIWTPIPQAVKDYIATPKPNGYQSLHTTVIPFLNESMFHLEVQIRTEDMDLIAERGIAA 384

Query: 493 HYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREF 552
           HYSGR  V+G V     +GR+  GK +CLNN   ALRI WLNAIREWQEEFVGNM+SREF
Sbjct: 385 HYSGRGVVSGPVRPGISSGRNSNGKVICLNNTGFALRIGWLNAIREWQEEFVGNMSSREF 444

Query: 553 VDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAK 602
           VDTITRDLLGSRVFVFTP+GEIKNLPKGATVVDYAY+IHTEIGNKMVAAK
Sbjct: 445 VDTITRDLLGSRVFVFTPKGEIKNLPKGATVVDYAYLIHTEIGNKMVAAK 494


>gi|168046238|ref|XP_001775581.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672999|gb|EDQ59528.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 886

 Score =  714 bits (1843), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/622 (59%), Positives = 452/622 (72%), Gaps = 28/622 (4%)

Query: 30  DCSVLSCAWKAPRALTGFLASTTHPAHSSSLSLGPTGRRNRINSRCEAFDVGSWCTEGSD 89
           +C+  SCAW++PR L+GFLAST  P  S       +  R+RI   C +  + SWC     
Sbjct: 3   ECTSSSCAWRSPRTLSGFLAST--PQSSQGDCALSSRLRSRILIHC-SHCIPSWCQHIQK 59

Query: 90  LVLLGKLPRSSLLHVA--CKRWRLCLSPSVSSDAFKED--------SPERLWEDLRPTIS 139
           + ++  L +    H+    K+      P V+  A  E+        +P  LWE L+P+IS
Sbjct: 60  VGVIQCLRKGGRGHLNKNYKQSGRSERPRVTCCAGAEELYLSDKNITPITLWESLKPSIS 119

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           YL+  +L +V+  L LAFEAHDGQKR+SGEPFIIHPVEVARILGE E+DWE+I AGLLHD
Sbjct: 120 YLTKAQLRMVKDGLKLAFEAHDGQKRKSGEPFIIHPVEVARILGEQEMDWETIVAGLLHD 179

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
           TVEDT  VTFERIE++FG  VRRI++ + +VSKLGK++C+N +   +DVKADDLRQMFLA
Sbjct: 180 TVEDTEHVTFERIEDQFGPAVRRILKLDVQVSKLGKMQCQNSDSLGKDVKADDLRQMFLA 239

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           MTEEVRVIIVKLADRLHNMRTLSHMPPHKQ  IA ETLQVFAPLAKLLGM++IKSELE L
Sbjct: 240 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQKYIAMETLQVFAPLAKLLGMHRIKSELEEL 299

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           SFM+   E++A++K RV  L K  E  + EA K+L + I  DQFL  MT   ++ ++ K+
Sbjct: 300 SFMFAYPEEHAELKLRVEALRKTQEDVVVEAKKVLYETISRDQFLGYMTEDIKVATLSKQ 359

Query: 380 PYSIYKAVLKSRGSINEVNQIAQ--LRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWT 437
            YSIYK +   + S  EV  IAQ  LRI++K KP + VG LC+ QQ+CYHVLGLVH +W 
Sbjct: 360 LYSIYKKIADQKISAEEVRDIAQVWLRIVLKLKPATSVGHLCNVQQVCYHVLGLVHAMWP 419

Query: 438 PIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGR 497
           P+P+ MKDYIATPKPNGYQSLHTT+IPF  ++ F +E+QIRTEEMD +AE GIAAH+SGR
Sbjct: 420 PLPQTMKDYIATPKPNGYQSLHTTVIPFGTQTYFPIEIQIRTEEMDKLAEWGIAAHHSGR 479

Query: 498 VFV------------TGLVGHARPN-GRSPRGKTVCLNNANIALRISWLNAIREWQEEFV 544
                           G  G A  N   +P     CLN+A+IA R+SWL +IR+WQEEFV
Sbjct: 480 WVAERESDAMGPFARKGTNGAAAGNLASNPPSSNTCLNDADIARRVSWLKSIRDWQEEFV 539

Query: 545 GNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVN 604
           GNM+SREFVDT+T DLL SRVFVFTP+GE+KNLPKGATV+DYAY IHT++GNKMVAAKVN
Sbjct: 540 GNMSSREFVDTVTGDLLSSRVFVFTPKGEVKNLPKGATVIDYAYQIHTDVGNKMVAAKVN 599

Query: 605 GNLVSPTHVLANAEVVEIITYN 626
           G LVSPTH LANAEVVEI+TY+
Sbjct: 600 GILVSPTHTLANAEVVEIVTYD 621


>gi|168046405|ref|XP_001775664.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672937|gb|EDQ59467.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 873

 Score =  710 bits (1832), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 363/617 (58%), Positives = 455/617 (73%), Gaps = 36/617 (5%)

Query: 30  DCSVLSCAWKAPRALTGFLASTTHPAHSSSLSLGPTGRRNRINS-RCEA-FDVGSWCTEG 87
           +C+  +CAW++PR  +GFLAST  P  S       +  RN++++ RC     + ++  + 
Sbjct: 3   ECTSSNCAWRSPRVFSGFLAST--PQSSQGECASWSKLRNKVSAHRCPVNHSIKNYVQQP 60

Query: 88  SDLVLLGKLPRSSLLHVACKRWRLCLSPSVSSDAFKEDSPERLWEDLRPTISYLSPNELE 147
                 G+  R  +  V C     C        +    +P  LWE L+P ISYL+  +  
Sbjct: 61  ------GRSGR--IREVIC-----CAGSDDLHLSSYNTTPSELWESLKPAISYLTKAQSR 107

Query: 148 LVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVV 207
           +V+  L LAFEAHDGQKR+SGEP+IIHPVEVARILGELE+DWE++ AGLLHDTVEDT  V
Sbjct: 108 MVKDGLKLAFEAHDGQKRKSGEPYIIHPVEVARILGELEMDWETVVAGLLHDTVEDTEHV 167

Query: 208 TFERIEEEFGATVRRIVEGETK--VSKLGKLKCKNENHSV---QDVKADDLRQMFLAMTE 262
           TFERIE++FG  VRRIVEGETK  VSKLGK++C+N +      +DVKADDLRQMFLAMTE
Sbjct: 168 TFERIEDQFGPVVRRIVEGETKATVSKLGKMQCQNSDGMSTLSRDVKADDLRQMFLAMTE 227

Query: 263 EVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFM 322
           EVRVIIVKLADRLHNMRTLSHMPPHKQ  IATETLQVFAPLA+LLGMY+IKSELE LSFM
Sbjct: 228 EVRVIIVKLADRLHNMRTLSHMPPHKQKYIATETLQVFAPLARLLGMYRIKSELEELSFM 287

Query: 323 YTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYS 382
           Y   E++A++K+RV  L K+ E  + EA K+L + I  DQFL  MT   ++ ++ KE YS
Sbjct: 288 YAYPEEHAEIKQRVESLRKQQEDVVLEAKKVLHETISRDQFLGYMTADIKVATLSKELYS 347

Query: 383 IYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRA 442
           IYK + ++ G+  ++  IAQ+R+++K KP + VG LC+ QQ+CYHVLGLVH +W P+P++
Sbjct: 348 IYKKMDQNIGA-EDIRDIAQMRLVLKLKPSASVGHLCNVQQVCYHVLGLVHAMWPPLPQS 406

Query: 443 MKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFV-- 500
           MKDYIATPKPNGYQSLHTT+IPF  ++ F LE+QIRT+EMD +AE GIAA+YSGR     
Sbjct: 407 MKDYIATPKPNGYQSLHTTVIPFGTQTYFPLEIQIRTDEMDRLAECGIAAYYSGRWMAER 466

Query: 501 --TGLVGHARPNGRSPR---------GKTVCLNNANIALRISWLNAIREWQEEFVGNMTS 549
               +V  AR    + R         G +  LN+A+IA R+SWL +IR+WQEEFVGNM+S
Sbjct: 467 NSDAMVPFARNEEDAARAIYPASNSLGSSSYLNDADIARRVSWLKSIRDWQEEFVGNMSS 526

Query: 550 REFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVS 609
           REFVDT+T DLL SRVFVFTP+GE+KNLPKGATV+DYAY IHT++GNKMVAAKVNGNLVS
Sbjct: 527 REFVDTVTGDLLSSRVFVFTPKGEVKNLPKGATVIDYAYQIHTDVGNKMVAAKVNGNLVS 586

Query: 610 PTHVLANAEVVEIITYN 626
           PTH LANAEVVEI+TY+
Sbjct: 587 PTHALANAEVVEILTYD 603


>gi|302788748|ref|XP_002976143.1| hypothetical protein SELMODRAFT_104457 [Selaginella moellendorffii]
 gi|300156419|gb|EFJ23048.1| hypothetical protein SELMODRAFT_104457 [Selaginella moellendorffii]
          Length = 750

 Score =  671 bits (1731), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 321/494 (64%), Positives = 394/494 (79%), Gaps = 12/494 (2%)

Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
           + LR +ISYLS  EL  V+ AL LAF+AHDGQKRRSGEP+IIHPVEV RILGELE+DWE+
Sbjct: 1   QKLRTSISYLSQGELNRVKEALKLAFDAHDGQKRRSGEPYIIHPVEVGRILGELEMDWET 60

Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
           IAAGLLHDTVEDT+ VTFE++EEEFG  VRRIVEGETKVSKLGK++  +   +VQD +AD
Sbjct: 61  IAAGLLHDTVEDTDFVTFEKLEEEFGFNVRRIVEGETKVSKLGKIQFSDSQAAVQDAQAD 120

Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
           DLRQMFLAMTEEVRVI+VKLADRLHNMRTLS MP HKQ  IA ETLQVFAPLA+LLG+++
Sbjct: 121 DLRQMFLAMTEEVRVIVVKLADRLHNMRTLSFMPEHKQRHIALETLQVFAPLARLLGIHK 180

Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
           IKSELE LSFMY    DY  +K++V   +K     + +A   L+K ++ DQFL  +    
Sbjct: 181 IKSELEELSFMYAYPADYIDMKKKVEKHFKSQSDLILQAKNALVKSVQSDQFLSHVIDGV 240

Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
            I ++CK+ YSIY    K + ++ E   +AQ+RI+++PKP S +  LCS +Q+CYHVLGL
Sbjct: 241 NIFTLCKDLYSIY----KKKKNLEEAGDVAQVRIVLQPKPDS-IDRLCSAKQVCYHVLGL 295

Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
           VH +W+P+P+ MKDYIATPKPNGYQSLHT +IPF  ++ F LE+QIRT++MD IA+ GIA
Sbjct: 296 VHTLWSPVPQTMKDYIATPKPNGYQSLHTKVIPFGSKTFFPLEIQIRTDKMDKIAQYGIA 355

Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
            H+SG + +T       P     R ++ CLN A++A R+SWLN+IR+WQEEFVGNMTSRE
Sbjct: 356 VHFSGSIALT-------PAINGSRQQSNCLNAADLARRVSWLNSIRQWQEEFVGNMTSRE 408

Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
           FVDT+T DLLGSRVFVFTP+GEIKNLP+GATVVDYAY +H ++GNKMV AKVNGNLVSPT
Sbjct: 409 FVDTVTVDLLGSRVFVFTPKGEIKNLPRGATVVDYAYQLHADVGNKMVGAKVNGNLVSPT 468

Query: 612 HVLANAEVVEIITY 625
           HVL+NAEVVEI+TY
Sbjct: 469 HVLSNAEVVEILTY 482


>gi|302769634|ref|XP_002968236.1| hypothetical protein SELMODRAFT_89270 [Selaginella moellendorffii]
 gi|300163880|gb|EFJ30490.1| hypothetical protein SELMODRAFT_89270 [Selaginella moellendorffii]
          Length = 750

 Score =  668 bits (1724), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 320/494 (64%), Positives = 393/494 (79%), Gaps = 12/494 (2%)

Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
           + LR +ISYLS  EL  V+ AL LAF+AHDGQKRRSGEP+IIHPVEV RILGELE+DWE+
Sbjct: 1   QKLRTSISYLSQGELNRVKEALKLAFDAHDGQKRRSGEPYIIHPVEVGRILGELEMDWET 60

Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
           IAAGLLHDTVEDT+ VTFE++EEEFG  VRRIVEGETKVSKLGK++  +   +VQD +AD
Sbjct: 61  IAAGLLHDTVEDTDFVTFEKLEEEFGFNVRRIVEGETKVSKLGKIQFSDSQAAVQDAQAD 120

Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
           DLRQMFLAMTEEVRVI+VKLADRLHNMRTLS MP HKQ  IA ETLQVFAPLA+LLG+++
Sbjct: 121 DLRQMFLAMTEEVRVIVVKLADRLHNMRTLSFMPEHKQRHIALETLQVFAPLARLLGIHK 180

Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
           IKSELE LSFMY    DY  +K++V   +K     + +A   L+K ++ DQFL  +    
Sbjct: 181 IKSELEELSFMYAYPADYIDMKKKVEKHFKSQSDLILQAKNALVKSVQSDQFLSHVIDGV 240

Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
            I ++CK+ YSIY    K + ++ E   +AQ+RI+++PK  S +  LCS +Q+CYHVLGL
Sbjct: 241 NIFTLCKDLYSIY----KKKKNLEEAGDVAQVRIVLQPKQDS-IDRLCSAKQVCYHVLGL 295

Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
           VH +W+P+P+ MKDYIATPKPNGYQSLHT +IPF  ++ F LE+QIRT++MD IA+ GIA
Sbjct: 296 VHTLWSPVPQTMKDYIATPKPNGYQSLHTKVIPFGSKTFFPLEIQIRTDKMDKIAQYGIA 355

Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
            H+SG + +T       P     R ++ CLN A++A R+SWLN+IR+WQEEFVGNMTSRE
Sbjct: 356 VHFSGSIALT-------PAINGSRQQSNCLNAADLARRVSWLNSIRQWQEEFVGNMTSRE 408

Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
           FVDT+T DLLGSRVFVFTP+GEIKNLP+GATVVDYAY +H ++GNKMV AKVNGNLVSPT
Sbjct: 409 FVDTVTVDLLGSRVFVFTPKGEIKNLPRGATVVDYAYQLHADVGNKMVGAKVNGNLVSPT 468

Query: 612 HVLANAEVVEIITY 625
           HVL+NAEVVEI+TY
Sbjct: 469 HVLSNAEVVEILTY 482


>gi|414866728|tpg|DAA45285.1| TPA: hypothetical protein ZEAMMB73_904820 [Zea mays]
          Length = 624

 Score =  633 bits (1633), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 299/371 (80%), Positives = 336/371 (90%)

Query: 256 MFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSE 315
           MFLAMTEEVRVIIVKLADRLHNMRTL+HMP HKQ +IA ETLQVFAPLAKLLGMY+IKSE
Sbjct: 1   MFLAMTEEVRVIIVKLADRLHNMRTLTHMPQHKQYAIAVETLQVFAPLAKLLGMYRIKSE 60

Query: 316 LENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRS 375
           LE LSFMY N   +A++++RV DLYK HE+ELEEAN+IL +KI +D+FLDL++V+TE+RS
Sbjct: 61  LEYLSFMYVNPTGFAELRKRVEDLYKSHEQELEEANRILRQKIAEDEFLDLVSVETEVRS 120

Query: 376 VCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGI 435
           V KE YSIYK  LKS+ SINEVNQ+AQLRIIIKPK C+GVGPLC+ QQICYHVLGLVHGI
Sbjct: 121 VYKELYSIYKTTLKSKSSINEVNQVAQLRIIIKPKSCNGVGPLCTAQQICYHVLGLVHGI 180

Query: 436 WTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYS 495
           WTPIP+A++DYIATPKPNGYQSLHTT+IPFL ESMF LEVQIRTE+MDLIAERGIAAHYS
Sbjct: 181 WTPIPQAVEDYIATPKPNGYQSLHTTVIPFLNESMFHLEVQIRTEDMDLIAERGIAAHYS 240

Query: 496 GRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDT 555
           GR   +G VG    +GR+ +GK +CLNN + ALRI WLNAIREWQEEFVGNM+SREFVDT
Sbjct: 241 GRRVASGPVGLGISSGRNAKGKVICLNNTDFALRIGWLNAIREWQEEFVGNMSSREFVDT 300

Query: 556 ITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLA 615
           ITRDLLGSRVFVFTP+GEIKNLPKGATVVDYAY+IHTEIGNKM+AAKVNGNLVSP HVLA
Sbjct: 301 ITRDLLGSRVFVFTPKGEIKNLPKGATVVDYAYLIHTEIGNKMIAAKVNGNLVSPIHVLA 360

Query: 616 NAEVVEIITYN 626
           NAEVVEIITY+
Sbjct: 361 NAEVVEIITYD 371


>gi|384245520|gb|EIE19013.1| hypothetical protein COCSUDRAFT_31311 [Coccomyxa subellipsoidea
           C-169]
          Length = 692

 Score =  530 bits (1366), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 278/512 (54%), Positives = 352/512 (68%), Gaps = 19/512 (3%)

Query: 130 LWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDW 189
           LW  L P +SYL   E + V  AL LA+++H+GQ R+SGE FI HPVEV RIL EL++D 
Sbjct: 24  LWGRLEPLLSYLGDEEKKKVLEALHLAYDSHNGQLRKSGEAFITHPVEVTRILAELKMDH 83

Query: 190 ESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVK 249
           ES+ AGLLHDTVEDT  V FE IE  FG  VR+IVEGET+ SK+G      EN S  ++ 
Sbjct: 84  ESLIAGLLHDTVEDTENVKFEEIEFYFGKAVRQIVEGETRFSKIGSF---GENASRAELA 140

Query: 250 ADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGM 309
           A DL+Q+FLAMTEEVR+IIVKLADRLHNMRTL  MPPHKQ  IA ETL VFAPLA+LLG+
Sbjct: 141 ALDLKQLFLAMTEEVRIIIVKLADRLHNMRTLDSMPPHKQKKIADETLLVFAPLARLLGL 200

Query: 310 YQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTV 369
           Y IK ELE LSF Y+N E++A V+RR+  L KE E  + +A   L +K+E D FL     
Sbjct: 201 YSIKEELEALSFSYSNPEEHALVQRRLDCLAKEQEDVVLKAQSALQEKLETDTFLQERVE 260

Query: 370 KTEIRSVCKEPYSIYKAVLKSRG-SINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
              + +  K  YS+Y+  LK RG  + ++  +AQLR+I+K K         +  Q+CYH+
Sbjct: 261 SFSVGTHQKNVYSVYRK-LKERGMDLEDLQDVAQLRVIVKLKDAHDSSLYGTGSQLCYHI 319

Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAER 488
           +GLVH +W PIP A+KDYIATPK NGYQSLHTT++P   E +F LEVQIRT EM  +AE 
Sbjct: 320 MGLVHTMWAPIPGAVKDYIATPKTNGYQSLHTTVLPLGAEKLFPLEVQIRTAEMHRLAEY 379

Query: 489 GIAA--HYSGRVFVTGLVGH-----------ARPNGRSPRGKTVC-LNNANIALRISWLN 534
           GIA   ++ G V +     H              + +S R  ++  LNN+ +A RI+WLN
Sbjct: 380 GIAGSLYWPGNVSLAVTAMHHIVGENWTAAKKASDFKSSRLPSLSDLNNSVMARRINWLN 439

Query: 535 AIREWQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEI 594
           +IREWQ EFV ++++REFVD IT DLLG  VFVFTP GE+  LPKGATVVD+AY +HT++
Sbjct: 440 SIREWQSEFVNSLSAREFVDCITDDLLGRGVFVFTPSGEVMRLPKGATVVDFAYHVHTDV 499

Query: 595 GNKMVAAKVNGNLVSPTHVLANAEVVEIITYN 626
           GN+M  AKVNG +V   H LANAEVVE++TY+
Sbjct: 500 GNQMFGAKVNGKVVHAGHALANAEVVEVLTYD 531


>gi|297564854|ref|YP_003683826.1| (p)ppGpp synthetase I SpoT/RelA [Meiothermus silvanus DSM 9946]
 gi|296849303|gb|ADH62318.1| (p)ppGpp synthetase I, SpoT/RelA [Meiothermus silvanus DSM 9946]
          Length = 738

 Score =  486 bits (1251), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 262/506 (51%), Positives = 330/506 (65%), Gaps = 30/506 (5%)

Query: 126 SPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGEL 185
           SP +LW  L P I+YL P E   VR AL  AF AH GQ R+SGEP+I+HPV VA IL EL
Sbjct: 8   SPTQLWARLEPKIAYLPPAEQGRVRTALEFAFAAHQGQLRKSGEPYIVHPVAVAEILAEL 67

Query: 186 ELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKL--KCKNENH 243
            LD E++ AGLLHDTVEDT V   E IEE FG  VRRIVEGETKVSKL KL  +   E  
Sbjct: 68  GLDAETLMAGLLHDTVEDTEVKP-EDIEERFGTAVRRIVEGETKVSKLYKLAHQVAEERP 126

Query: 244 SVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPL 303
           S+++ +A+DLRQMF+AM E+VR+IIVKLADRLHN+RTL  MPPHKQ+ IA ETL+++APL
Sbjct: 127 SLEEQRAEDLRQMFIAMAEDVRIIIVKLADRLHNLRTLEFMPPHKQTRIARETLEIYAPL 186

Query: 304 AKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQF 363
           A  LG+ QIK ELE+LSF Y   E YA +  R+     E E  +E   + L   ++ D  
Sbjct: 187 AHRLGIGQIKWELEDLSFRYLEPEAYADLLGRLKSHRAEREAAVERGKEALEAVLQRDSV 246

Query: 364 LDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGV-GPLCSPQ 422
           L       E+    K  YSI+K + +   ++ ++  +  LR+I++P+P   +       +
Sbjct: 247 LGASIQGYEVTGRTKHLYSIWKKMQREGRALEQIYDLLALRVILEPRPTPNLEEKAMREK 306

Query: 423 QICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEM 482
           Q+CYHVLGLVH +W PIP  +KDYIA PKPNGYQSLHTT+I     S   LEVQIRT EM
Sbjct: 307 QVCYHVLGLVHALWQPIPGRVKDYIAVPKPNGYQSLHTTVIAG---SGLPLEVQIRTREM 363

Query: 483 DLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEE 542
             IAE GIAAH+   ++  GL                  +   I  R+ WL +I+EWQ E
Sbjct: 364 HQIAEYGIAAHW---LYKQGLT-----------------DPEEIKRRVDWLRSIQEWQAE 403

Query: 543 FVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAK 602
           F    +SREFVD +TRDLLG RVFVFTP+G I NLP+GA+ VD+AY IHTE+GN MV AK
Sbjct: 404 F---SSSREFVDAVTRDLLGGRVFVFTPKGRIINLPRGASPVDFAYHIHTEVGNHMVGAK 460

Query: 603 VNGNLVSPTHVLANAEVVEIITYNVS 628
           VNG +V  ++ L N E+VEI+T   +
Sbjct: 461 VNGRIVPLSYELQNGEIVEILTAKTA 486


>gi|328951506|ref|YP_004368841.1| (p)ppGpp synthetase I SpoT/RelA [Marinithermus hydrothermalis DSM
           14884]
 gi|328451830|gb|AEB12731.1| (p)ppGpp synthetase I, SpoT/RelA [Marinithermus hydrothermalis DSM
           14884]
          Length = 735

 Score =  479 bits (1234), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 256/504 (50%), Positives = 338/504 (67%), Gaps = 33/504 (6%)

Query: 126 SPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGEL 185
           +P  LW+ L P + YL+P +   V+ AL  AF AHDGQ R+SG+PFI HPV VA IL EL
Sbjct: 7   TPHTLWKHLEPKLGYLTPQQRNRVQEALEFAFTAHDGQHRKSGDPFITHPVAVAGILAEL 66

Query: 186 ELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSV 245
           ++D +++ AGLLHDTVEDT+V T + IE  FG TVRRIVEGETKVSKL K+       S+
Sbjct: 67  KMDEDTLIAGLLHDTVEDTDV-TLDAIEARFGPTVRRIVEGETKVSKLPKIA-----ESI 120

Query: 246 QDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAK 305
           +D +A++LRQMF+AMTE+VR+IIVKLADRLHNMRTL  MPP KQ  I+ ETL++FAPLA 
Sbjct: 121 EDEQAENLRQMFIAMTEDVRIIIVKLADRLHNMRTLEFMPPEKQQRISRETLEIFAPLAH 180

Query: 306 LLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLD 365
            LG+ QIK ELE+L+F Y + E+ A ++ R++    EH+  +E A   L + +  D  L 
Sbjct: 181 RLGIGQIKWELEDLAFRYLHPEECAALEVRLSHHRAEHQAIVERAKAALEEALAKDYVLK 240

Query: 366 LMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPL-CSPQQI 424
           L   +  +    K  YSI+K + +   ++ ++  +  LR+I+ P+P S         +Q+
Sbjct: 241 LAVQEYTVTGRTKHLYSIWKKMERDGKTLEQIYDLLALRVILDPRPSSDPEEAKAREKQV 300

Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDL 484
           CYHV+GLVH +W PIP  +KDYIA PKPNGYQSLHTT+I +       LEVQIRT EM  
Sbjct: 301 CYHVIGLVHALWQPIPGRVKDYIAMPKPNGYQSLHTTVITW---QGMPLEVQIRTREMHR 357

Query: 485 IAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFV 544
           IAE GIAAH+   ++  GL                  N   +  R+SWL AI+EWQ+EF 
Sbjct: 358 IAEYGIAAHW---LYKEGLT-----------------NPEEVKRRVSWLRAIQEWQQEF- 396

Query: 545 GNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVN 604
              +SREFV+ +T+DLLG RVFVFTP+G+I NLPKGAT VD+AY IHTE+G+ M+ AKVN
Sbjct: 397 --SSSREFVEAVTKDLLGGRVFVFTPKGQIINLPKGATPVDFAYHIHTEVGHSMIGAKVN 454

Query: 605 GNLVSPTHVLANAEVVEIITYNVS 628
           G +V  ++ L NA++VEIIT   S
Sbjct: 455 GRIVPLSYELQNADIVEIITSKAS 478


>gi|384440422|ref|YP_005655146.1| Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase (PpGpp
           synthase) [Thermus sp. CCB_US3_UF1]
 gi|359291555|gb|AEV17072.1| Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase (PpGpp
           synthase) [Thermus sp. CCB_US3_UF1]
          Length = 726

 Score =  478 bits (1231), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 254/496 (51%), Positives = 327/496 (65%), Gaps = 32/496 (6%)

Query: 130 LWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDW 189
           LWE L P ++YLSP E E V+ A + A EAH GQ R+SGEP+I HPV VA IL  L +D 
Sbjct: 7   LWERLEPQLAYLSPAEREGVKAAYLFAEEAHRGQLRKSGEPYITHPVAVAEILASLRMDA 66

Query: 190 ESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVK 249
           E++AAGLLHDTVED  V   E +E  FG  VRRIVEGETKVSKL KL     N   ++ +
Sbjct: 67  ETVAAGLLHDTVEDCGVAP-EELERRFGPGVRRIVEGETKVSKLYKLA----NLEGEEKR 121

Query: 250 ADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGM 309
           A+DLRQMF+AM E+VR+IIVKLADRLHN+RTL HMPPHKQ  IA ETL+++APLA  LG+
Sbjct: 122 AEDLRQMFIAMAEDVRIIIVKLADRLHNLRTLEHMPPHKQRRIAQETLEIYAPLAHRLGI 181

Query: 310 YQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTV 369
            Q+K ELE+LSF Y + E Y  +  R+ +  +  E+ +  A  IL + +  D+ L     
Sbjct: 182 GQLKWELEDLSFRYLHPEAYHALLSRIQETQEARERVIHRAMAILEEALRKDELLQAQLQ 241

Query: 370 KTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPC-SGVGPLCSPQQICYHV 428
             E+    K  YSI+K + +   ++ ++  +  +R+I+ PKP  +  G     +Q+CYHV
Sbjct: 242 GFEVTGRPKHLYSIWKKMEREGKALEQIYDLLAVRVILDPKPAPTEEGQALREKQVCYHV 301

Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAER 488
           LGLVH +W PIP  +KDYIA PKPNGYQSLHTT+I         LEVQIRT EM  +AE 
Sbjct: 302 LGLVHALWQPIPGRVKDYIAVPKPNGYQSLHTTVIAL---EGLPLEVQIRTREMHRVAEY 358

Query: 489 GIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMT 548
           GIAAH+   ++  GL                  +   +  RISWL +I+EWQ+EF    +
Sbjct: 359 GIAAHW---LYKEGLT-----------------DPEEVKRRISWLRSIQEWQQEF---SS 395

Query: 549 SREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLV 608
           SREFV+ +TRDLLG RVFVFTP+G I NLPKGAT VD+AY IHTE+G+ MV AKVNG +V
Sbjct: 396 SREFVEAVTRDLLGGRVFVFTPKGRIINLPKGATPVDFAYHIHTEVGHHMVGAKVNGRIV 455

Query: 609 SPTHVLANAEVVEIIT 624
             ++ L N E+VEI+T
Sbjct: 456 PLSYELQNGEIVEILT 471


>gi|46199657|ref|YP_005324.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [Thermus
           thermophilus HB27]
 gi|384431896|ref|YP_005641256.1| (p)ppGpp synthetase I SpoT/RelA [Thermus thermophilus SG0.5JP17-16]
 gi|46197283|gb|AAS81697.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [Thermus
           thermophilus HB27]
 gi|333967364|gb|AEG34129.1| (p)ppGpp synthetase I, SpoT/RelA [Thermus thermophilus
           SG0.5JP17-16]
          Length = 727

 Score =  469 bits (1207), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 248/496 (50%), Positives = 326/496 (65%), Gaps = 32/496 (6%)

Query: 130 LWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDW 189
           LW  L P ++YL+P E   VR A   A EAH GQ RRSGEP+I HPV VA IL  L++D 
Sbjct: 8   LWNRLEPALAYLAPEERAKVREAYRFAEEAHRGQLRRSGEPYITHPVAVAEILAGLQMDA 67

Query: 190 ESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVK 249
           +++AAGLLHDT+ED  V   E +E  FG TVRRIVEGETKVSKL KL     N   ++ +
Sbjct: 68  DTVAAGLLHDTLEDCGVAP-EELERRFGPTVRRIVEGETKVSKLYKLA----NLEGEERR 122

Query: 250 ADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGM 309
           A+DLRQMF+AM E+VR+IIVKLADRLHN+RTL HMPP KQ  IA ETL+++APLA  LGM
Sbjct: 123 AEDLRQMFIAMAEDVRIIIVKLADRLHNLRTLEHMPPEKQKRIAQETLEIYAPLAHRLGM 182

Query: 310 YQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTV 369
            Q+K ELE+LSF Y + E +A +  R+    +  E+ +++A  +L + +  D+ L     
Sbjct: 183 GQLKWELEDLSFRYLHPEAFASLSARIQATQEARERLIQKAIHLLQETLARDELLQSQLQ 242

Query: 370 KTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPC-SGVGPLCSPQQICYHV 428
             E+    K  YSI+K + +   ++ ++  +  +R+I+ PKP  +        +Q+CYHV
Sbjct: 243 GFEVTGRPKHLYSIWKKMEREGKTLEQIYDLLAVRVILDPKPAPTRESQALREKQVCYHV 302

Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAER 488
           LGLVH +W PIP  +KDYIA PKPNGYQSLHTT+I         LEVQIRT EM  +AE 
Sbjct: 303 LGLVHALWQPIPGRVKDYIAVPKPNGYQSLHTTVIAL---EGLPLEVQIRTREMHRVAEY 359

Query: 489 GIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMT 548
           GIAAH+   ++  GL                  +   +  R+SWL +I+EWQ+EF    +
Sbjct: 360 GIAAHW---LYKEGLT-----------------DPEEVKRRVSWLKSIQEWQKEF---SS 396

Query: 549 SREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLV 608
           SREFV+ +T+DLLG RVFVFTP+G I NLPKGAT VD+AY IHTE+G+ MV AKVNG +V
Sbjct: 397 SREFVEAVTKDLLGGRVFVFTPKGRIINLPKGATPVDFAYHIHTEVGHHMVGAKVNGRIV 456

Query: 609 SPTHVLANAEVVEIIT 624
             ++ L N E+VEI+T
Sbjct: 457 PLSYELQNGEIVEILT 472


>gi|55981686|ref|YP_144983.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [Thermus
           thermophilus HB8]
 gi|55773099|dbj|BAD71540.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (ppGpp
           synthase) [Thermus thermophilus HB8]
          Length = 727

 Score =  469 bits (1206), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 248/496 (50%), Positives = 325/496 (65%), Gaps = 32/496 (6%)

Query: 130 LWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDW 189
           LW  L P ++YL+P E   VR A   A EAH GQ RRSGEP+I HPV VA IL  L++D 
Sbjct: 8   LWNRLEPALAYLAPEERAKVREAYRFAEEAHRGQLRRSGEPYITHPVAVAEILAGLQMDA 67

Query: 190 ESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVK 249
           +++AAGLLHDT+ED  V   E +E  FG TVRRIVEGETKVSKL KL     N   ++ +
Sbjct: 68  DTVAAGLLHDTLEDCGVAP-EELERRFGPTVRRIVEGETKVSKLYKLA----NLEGEERR 122

Query: 250 ADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGM 309
           A+DLRQMF+AM E+VR+IIVKLADRLHN+RTL HMPP KQ  IA ETL+++APLA  LGM
Sbjct: 123 AEDLRQMFIAMAEDVRIIIVKLADRLHNLRTLEHMPPEKQKRIAQETLEIYAPLAHRLGM 182

Query: 310 YQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTV 369
            Q+K ELE+LSF Y + E +A +  R+    +  E+ ++ A  +L + +  D+ L     
Sbjct: 183 GQLKWELEDLSFRYLHPEAFASLSARIQATQEARERLIQRAIHLLQETLARDELLQSQLQ 242

Query: 370 KTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPC-SGVGPLCSPQQICYHV 428
             E+    K  YSI+K + +   ++ ++  +  +R+I+ PKP  +        +Q+CYHV
Sbjct: 243 GFEVTGRPKHLYSIWKKMEREGKTLEQIYDLLAVRVILDPKPAPTRESQALREKQVCYHV 302

Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAER 488
           LGLVH +W PIP  +KDYIA PKPNGYQSLHTT+I         LEVQIRT EM  +AE 
Sbjct: 303 LGLVHALWQPIPGRVKDYIAVPKPNGYQSLHTTVIAL---EGLPLEVQIRTREMHRVAEY 359

Query: 489 GIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMT 548
           GIAAH+   ++  GL                  +   +  R+SWL +I+EWQ+EF    +
Sbjct: 360 GIAAHW---LYKEGLT-----------------DPEEVKRRVSWLKSIQEWQKEF---SS 396

Query: 549 SREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLV 608
           SREFV+ +T+DLLG RVFVFTP+G I NLPKGAT VD+AY IHTE+G+ MV AKVNG +V
Sbjct: 397 SREFVEAVTKDLLGGRVFVFTPKGRIINLPKGATPVDFAYHIHTEVGHHMVGAKVNGRIV 456

Query: 609 SPTHVLANAEVVEIIT 624
             ++ L N E+VEI+T
Sbjct: 457 PLSYELQNGEIVEILT 472


>gi|381191174|ref|ZP_09898685.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [Thermus
           sp. RL]
 gi|380450963|gb|EIA38576.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [Thermus
           sp. RL]
          Length = 727

 Score =  468 bits (1204), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 248/496 (50%), Positives = 325/496 (65%), Gaps = 32/496 (6%)

Query: 130 LWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDW 189
           LW  L P ++YL P E   VR A   A EAH GQ RRSGEP+I HPV VA IL  L++D 
Sbjct: 8   LWNRLEPALAYLPPEERAKVREAYRFAEEAHRGQLRRSGEPYITHPVAVAEILAGLQMDA 67

Query: 190 ESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVK 249
           +++AAGLLHDT+ED  V   E +E  FG TVRRIVEGETKVSKL KL     N   ++ +
Sbjct: 68  DTVAAGLLHDTLEDCGVAP-EELERRFGPTVRRIVEGETKVSKLYKLA----NLEGEERR 122

Query: 250 ADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGM 309
           A+DLRQMF+AM E+VR+IIVKLADRLHN+RTL HMPP KQ  IA ETL+++APLA  LGM
Sbjct: 123 AEDLRQMFIAMAEDVRIIIVKLADRLHNLRTLEHMPPEKQKRIAQETLEIYAPLAHRLGM 182

Query: 310 YQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTV 369
            Q+K ELE+LSF Y + E +A +  R+    +  E+ +++A  +L + +  D+ L     
Sbjct: 183 GQLKWELEDLSFRYLHPEAFASLSARIQATQEARERLIQKAIHLLQETLARDELLQSQLQ 242

Query: 370 KTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPC-SGVGPLCSPQQICYHV 428
             E+    K  YSI+K + +   ++ ++  +  +R+I+ PKP  +        +Q+CYHV
Sbjct: 243 GFEVTGRPKHLYSIWKKMEREGKTLEQIYDLLAVRVILDPKPAPTRESQALREKQVCYHV 302

Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAER 488
           LGLVH +W PIP  +KDYIA PKPNGYQSLHTT+I         LEVQIRT EM  +AE 
Sbjct: 303 LGLVHALWQPIPGRVKDYIAVPKPNGYQSLHTTVIAL---EGLPLEVQIRTREMHRVAEY 359

Query: 489 GIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMT 548
           GIAAH+   ++  GL                  +   +  R+SWL +I+EWQ+EF    +
Sbjct: 360 GIAAHW---LYKEGLT-----------------DPEEVKRRVSWLKSIQEWQKEF---SS 396

Query: 549 SREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLV 608
           SREFV+ +T+DLLG RVFVFTP+G I NLPKGAT VD+AY IHTE+G+ MV AKVNG +V
Sbjct: 397 SREFVEAVTKDLLGGRVFVFTPKGRIINLPKGATPVDFAYHIHTEVGHHMVGAKVNGRIV 456

Query: 609 SPTHVLANAEVVEIIT 624
             ++ L N E+VEI+T
Sbjct: 457 PLSYELQNGEIVEILT 472


>gi|386359779|ref|YP_006058024.1| RelA/SpoT family (p)ppGpp synthetase [Thermus thermophilus JL-18]
 gi|383508806|gb|AFH38238.1| (p)ppGpp synthetase, RelA/SpoT family [Thermus thermophilus JL-18]
          Length = 724

 Score =  467 bits (1201), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 247/496 (49%), Positives = 326/496 (65%), Gaps = 32/496 (6%)

Query: 130 LWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDW 189
           LW  L P ++YL+P E   V+ A   A EAH GQ RRSGEP+I HPV VA IL  L++D 
Sbjct: 5   LWNRLEPALAYLTPEERAKVQEAYRFAEEAHRGQLRRSGEPYITHPVAVAEILAGLQMDA 64

Query: 190 ESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVK 249
           +++AAGLLHDT+ED  V   E +E  FG TVRRIVEGETKVSKL KL     N   ++ +
Sbjct: 65  DTVAAGLLHDTLEDCGVAP-EELERRFGPTVRRIVEGETKVSKLYKLA----NLEGEERR 119

Query: 250 ADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGM 309
           A+DLRQMF+AM E+VR+IIVKLADRLHN+RTL HMPP KQ  IA ETL+++APLA  LGM
Sbjct: 120 AEDLRQMFIAMAEDVRIIIVKLADRLHNLRTLEHMPPEKQKRIAQETLEIYAPLAHRLGM 179

Query: 310 YQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTV 369
            Q+K ELE+LSF Y + E +A +  R+    +  E+ +++A  +L + +  D+ L     
Sbjct: 180 GQLKWELEDLSFRYLHPEAFASLSARIQATQEARERLIQKAIHLLQETLTRDELLQSQLQ 239

Query: 370 KTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPC-SGVGPLCSPQQICYHV 428
             E+    K  YSI+K + +   ++ ++  +  +R+I+ PKP  +        +Q+CYHV
Sbjct: 240 GFEVTGRPKHLYSIWKKMEREGKTLEQIYDLLAVRVILDPKPAPTRESQALREKQVCYHV 299

Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAER 488
           LGLVH +W PIP  +KDYIA PKPNGYQSLHTT+I         LEVQIRT EM  +AE 
Sbjct: 300 LGLVHALWQPIPGRVKDYIAVPKPNGYQSLHTTVIAL---EGLPLEVQIRTREMHRVAEY 356

Query: 489 GIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMT 548
           GIAAH+   ++  GL                  +   +  R+SWL +I+EWQ+EF    +
Sbjct: 357 GIAAHW---LYKEGLT-----------------DPEEVKRRVSWLKSIQEWQKEF---SS 393

Query: 549 SREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLV 608
           SREFV+ +T+DLLG RVFVFTP+G I NLPKGAT VD+AY IHTE+G+ MV AKVNG +V
Sbjct: 394 SREFVEAVTKDLLGGRVFVFTPKGRIINLPKGATPVDFAYHIHTEVGHHMVGAKVNGRIV 453

Query: 609 SPTHVLANAEVVEIIT 624
             ++ L N E+VEI+T
Sbjct: 454 PLSYELQNGEIVEILT 469


>gi|410696071|gb|AFV75139.1| (p)ppGpp synthetase, RelA/SpoT family [Thermus oshimai JL-2]
          Length = 732

 Score =  466 bits (1198), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 250/496 (50%), Positives = 322/496 (64%), Gaps = 32/496 (6%)

Query: 130 LWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDW 189
           LW  LRP ++YLS  E+  V  A   A  AH GQ+RRSGEP+I HPV VA IL  L +D 
Sbjct: 13  LWSQLRPHLAYLSEEEVAQVEAAYRFAEAAHAGQRRRSGEPYITHPVAVAEILASLRMDA 72

Query: 190 ESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVK 249
           E++ AGLLHD VED  V   E +E  FGA VRRIVEGETKVSKL K+     N   ++ +
Sbjct: 73  ETVMAGLLHDVVEDCGVAP-EELERRFGAGVRRIVEGETKVSKLYKMA----NLEGEERR 127

Query: 250 ADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGM 309
           A+DLRQMF+AM E+VR+IIVKLADRLHN+RTL HMPP KQ  IA ETL+++APLA  LGM
Sbjct: 128 AEDLRQMFIAMAEDVRIIIVKLADRLHNLRTLEHMPPEKQRRIAQETLEIYAPLAHRLGM 187

Query: 310 YQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTV 369
            QIK ELE+LSF Y + E Y  +  R+ +  +  EK +E A   L + +E D+ L     
Sbjct: 188 GQIKWELEDLSFRYLHPEAYQSLLERLKEGQEAREKLVERAMARLKEALEKDELLQAQIQ 247

Query: 370 KTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKP-CSGVGPLCSPQQICYHV 428
             E+    K  YSI+K + +   ++ ++  +  +R+I+ PKP  +        +Q+CYHV
Sbjct: 248 GFEVTGRPKHLYSIWKKMEREGKALEQIYDLLAVRVILDPKPSATEEARSLREKQVCYHV 307

Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAER 488
           LGLVH +W PIP  +KDYIA PKPNGYQSLHTT+I         LEVQIRT EM  +AE 
Sbjct: 308 LGLVHALWQPIPGRVKDYIAVPKPNGYQSLHTTVIAL---EGLPLEVQIRTREMHKVAEY 364

Query: 489 GIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMT 548
           GIAAH+   ++  GL                  +   +  R+SWL +I+EWQ+EF    +
Sbjct: 365 GIAAHW---LYKEGLT-----------------DPEEVKRRVSWLKSIQEWQQEF---SS 401

Query: 549 SREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLV 608
           SREFV+ +T+DLLG RVFVFTP+G I NLPKGAT VD+AY IHTE+G+ MV AKVNG +V
Sbjct: 402 SREFVEAVTKDLLGGRVFVFTPKGRIINLPKGATPVDFAYHIHTEVGHHMVGAKVNGRIV 461

Query: 609 SPTHVLANAEVVEIIT 624
             ++ L N E+VEI+T
Sbjct: 462 PLSYELQNGEMVEILT 477


>gi|218296101|ref|ZP_03496870.1| (p)ppGpp synthetase I, SpoT/RelA [Thermus aquaticus Y51MC23]
 gi|218243478|gb|EED10007.1| (p)ppGpp synthetase I, SpoT/RelA [Thermus aquaticus Y51MC23]
          Length = 726

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 247/498 (49%), Positives = 325/498 (65%), Gaps = 32/498 (6%)

Query: 128 ERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELEL 187
           E LWE+L   ++YLSP + E V +A + A EAH GQ R+SGEP+I HPV VA IL  L +
Sbjct: 5   EALWENLERVLAYLSPEDREKVHKAYLFAEEAHRGQLRKSGEPYITHPVAVAEILASLRM 64

Query: 188 DWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQD 247
           D +++AAGLLHDT+ED  V   E +E  FG  VRRIVEGETKVSKL K      N   ++
Sbjct: 65  DADTVAAGLLHDTMEDCGVAG-EELERRFGPAVRRIVEGETKVSKLYKFA----NLEGEE 119

Query: 248 VKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLL 307
            +A+DLRQMF+AM E+VR+IIVKLADRLHN+RTL HMP  KQ  IA ETL+++APLA  L
Sbjct: 120 KRAEDLRQMFIAMAEDVRIIIVKLADRLHNLRTLEHMPEGKQKRIAQETLEIYAPLAHRL 179

Query: 308 GMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLM 367
           GM QIK ELE+LSF Y + E Y  +  R+ +  +  E+ ++ A ++L + ++ D  L   
Sbjct: 180 GMGQIKWELEDLSFRYLHPEAYQALLARLQETQEARERMVKRAMEVLEEALKQDALLQSQ 239

Query: 368 TVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPC-SGVGPLCSPQQICY 426
               E+    K  YSI+K + +   ++ ++  +  +R+I+ PKP  +        +Q+CY
Sbjct: 240 LQGFEVTGRPKHLYSIWKKMEREGKALEQIYDLLAVRVILDPKPSPTEEAKGLREKQVCY 299

Query: 427 HVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIA 486
           HVLGLVH +W PIP  +KDYIA PKPNGYQSLHTT+I         LEVQIRT EM  IA
Sbjct: 300 HVLGLVHALWQPIPGRVKDYIAVPKPNGYQSLHTTVIAL---EGLPLEVQIRTREMHRIA 356

Query: 487 ERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGN 546
           E GIAAH+   ++  GL                  +   +  R+SWL  I+EWQ+EF   
Sbjct: 357 EYGIAAHW---LYKEGLT-----------------DPEEVKRRVSWLKNIQEWQQEF--- 393

Query: 547 MTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGN 606
            +SREFV+ +TRDLLG RVFVFTP+G I NLPKGAT VD+AY IHTE+G+ MV AKVNG 
Sbjct: 394 SSSREFVEAVTRDLLGGRVFVFTPKGRIINLPKGATPVDFAYHIHTEVGHHMVGAKVNGR 453

Query: 607 LVSPTHVLANAEVVEIIT 624
           +V  ++ L N ++VEI+T
Sbjct: 454 IVPLSYELQNGDMVEILT 471


>gi|291297171|ref|YP_003508569.1| (p)ppGpp synthetase I SpoT/RelA [Meiothermus ruber DSM 1279]
 gi|290472130|gb|ADD29549.1| (p)ppGpp synthetase I, SpoT/RelA [Meiothermus ruber DSM 1279]
          Length = 750

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 245/501 (48%), Positives = 331/501 (66%), Gaps = 33/501 (6%)

Query: 128 ERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELEL 187
           E LW+ L P + YL+      VR AL  A+ AH+GQ+R+SGEP+I+HPV VA+IL EL L
Sbjct: 21  EALWQRLEPYLHYLNDAAKAQVREALEFAYRAHEGQQRKSGEPYIVHPVAVAQILAELGL 80

Query: 188 DWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKL-KCKNENHSVQ 246
           D E++ AGLLHDT+EDT V   E IEE FGA VR+IVEGETKVSKL KL     E+   +
Sbjct: 81  DVETLLAGLLHDTIEDTEVRP-EDIEERFGAAVRKIVEGETKVSKLYKLAHAAQEDKHAE 139

Query: 247 DVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKL 306
              A+DLRQMF+AM E+VR+IIVKLADRLHN+RTL  MPPHKQ  IA ETL+++APLA  
Sbjct: 140 GKHAEDLRQMFIAMAEDVRIIIVKLADRLHNLRTLEFMPPHKQQRIARETLEIYAPLAHR 199

Query: 307 LGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDL 366
           LG+ Q+K ELE+LSF Y + E+Y  ++RR+     E E  ++ A + L + +  D  L  
Sbjct: 200 LGIGQVKLELEDLSFRYLDPENYQALERRLKSHRAEREAAVQAAKEKLEQALARDFILKQ 259

Query: 367 MTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGP---LCSPQQ 423
              K E+    K  +SI+K + +   +I ++  +  LR+I+ P+   G  P       +Q
Sbjct: 260 SIKKFEVTGRTKHLFSIWKKMEREGKTIEQIYDLLALRVILDPR--QGPDPEENSLREKQ 317

Query: 424 ICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMD 483
           +CYHVLGLVH +W PIP  +KDYIA PKPNGYQSLHTT+I     +   LEVQIRT EM 
Sbjct: 318 VCYHVLGLVHALWQPIPGRVKDYIAVPKPNGYQSLHTTVIAV---NGLPLEVQIRTREMH 374

Query: 484 LIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEF 543
            +AE G+AAH+  +  VT                    +  ++  R+ WL +I++WQ+E+
Sbjct: 375 RVAEFGVAAHWLYKEGVT--------------------DPEDLRRRVGWLKSIQDWQQEY 414

Query: 544 VGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKV 603
               +SR+FV+ +T++LLG RVFVFTP+G+I NLPKG++ VD+AY IHTE+G+ MV AKV
Sbjct: 415 ---SSSRDFVEAVTKELLGDRVFVFTPKGKIINLPKGSSPVDFAYHIHTEVGHHMVGAKV 471

Query: 604 NGNLVSPTHVLANAEVVEIIT 624
           NG +V  ++ L N E+VEI+T
Sbjct: 472 NGRIVPLSYELQNGEIVEILT 492


>gi|320449341|ref|YP_004201437.1| GTP pyrophosphokinase [Thermus scotoductus SA-01]
 gi|320149510|gb|ADW20888.1| GTP pyrophosphokinase [Thermus scotoductus SA-01]
          Length = 667

 Score =  460 bits (1184), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 246/496 (49%), Positives = 321/496 (64%), Gaps = 32/496 (6%)

Query: 130 LWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDW 189
           LW+ L   + YL P + E VR A   A EAH GQ R+SGEP+I HPV VA IL  L +D 
Sbjct: 7   LWDKLESLLDYLPPQDREKVREAYRFAEEAHRGQLRKSGEPYITHPVAVAEILASLRMDA 66

Query: 190 ESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVK 249
           +++ AGLLHDT+ED  V   E +E  FG  VRR+VEGETKVSKL KL     N   ++ +
Sbjct: 67  DTVMAGLLHDTLEDCGVAP-EELERRFGPAVRRLVEGETKVSKLYKLA----NLEGEEKR 121

Query: 250 ADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGM 309
           A+DLRQMF+AM E+VR+IIVKLADRLHN+RTL HMPP KQ  IA ETL+++APLA  LGM
Sbjct: 122 AEDLRQMFIAMAEDVRIIIVKLADRLHNLRTLEHMPPEKQRRIAQETLEIYAPLAHRLGM 181

Query: 310 YQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTV 369
            Q+K ELE+LSF Y + E Y  +  R+ +  +  E+ + +A   L + +  D+ L     
Sbjct: 182 GQLKWELEDLSFRYLHPEAYHALLSRIQETQEAREQIIRKAMVALEEALRRDELLQAQLQ 241

Query: 370 KTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPC-SGVGPLCSPQQICYHV 428
             E+    K  YSI+K + +   ++ ++  +  +R+I+ PKP  +  G     +Q+CYHV
Sbjct: 242 GLEVTGRPKHLYSIWKKMEREGKALEQIYDLLAVRVILDPKPAPTEEGRALREKQVCYHV 301

Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAER 488
           LGLVH +W PIP  +KDYIA PKPNGYQSLHTT+I         LEVQIRT EM  IAE 
Sbjct: 302 LGLVHALWQPIPGRVKDYIAVPKPNGYQSLHTTVIAL---EGLPLEVQIRTREMHRIAEY 358

Query: 489 GIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMT 548
           GIAAH+   ++  GL                  +   +  R+SWL +I+EWQ+EF    +
Sbjct: 359 GIAAHW---LYKEGLT-----------------DPEELKRRVSWLKSIQEWQQEF---SS 395

Query: 549 SREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLV 608
           SREFV+ +TRDLLG RVFVFTP+G I NLPKGAT VD+AY IHTE+G+ MV AKVNG +V
Sbjct: 396 SREFVEAVTRDLLGGRVFVFTPKGRIINLPKGATPVDFAYHIHTEVGHHMVGAKVNGRIV 455

Query: 609 SPTHVLANAEVVEIIT 624
             ++ L N E+VEI+T
Sbjct: 456 PLSYELQNGEIVEILT 471


>gi|313679281|ref|YP_004057020.1| (p)ppGpp synthetase I SpoT/RelA [Oceanithermus profundus DSM 14977]
 gi|313151996|gb|ADR35847.1| (p)ppGpp synthetase I, SpoT/RelA [Oceanithermus profundus DSM
           14977]
          Length = 734

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 237/504 (47%), Positives = 322/504 (63%), Gaps = 32/504 (6%)

Query: 126 SPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGEL 185
           +P  LW+ L P + YL       VR AL  A+ AH+GQ RRSGEP+I HPV V  IL EL
Sbjct: 7   TPTVLWQQLEPKLDYLPEEARVRVREALDFAYRAHEGQFRRSGEPYITHPVAVTEILAEL 66

Query: 186 ELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSV 245
           ++D +S+ AGLLHDTVED   V+FE I + FG  V RIVEGETKVSKL K+       SV
Sbjct: 67  QMDPDSLIAGLLHDTVEDVESVSFETIRQRFGEDVARIVEGETKVSKLSKMAT-----SV 121

Query: 246 QDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAK 305
           +D +A++LRQMF+AMT ++R+IIVKLADR HNMRTL  MPP KQ  I+ ETL++FAP+A 
Sbjct: 122 EDQQAENLRQMFIAMTRDLRIIIVKLADRTHNMRTLEFMPPEKQRRISKETLEIFAPMAH 181

Query: 306 LLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLD 365
            LG+ QIK ELE+L+F Y + E+YA +  R+A   + H + ++ A   L   +E+D  L 
Sbjct: 182 RLGIGQIKLELEDLAFRYLHPEEYAALVERLAHHSQAHREVVDNAKGALEHALENDYVLG 241

Query: 366 LMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCS-PQQI 424
           L      +    K  +SI+K + +   ++ ++  +  LR+I+ PKP +      S  +Q+
Sbjct: 242 LSVDGFSVSGRTKHLFSIWKKMQREEKTLEQIYDLLALRVILDPKPVASPEEAASREKQV 301

Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDL 484
           CYHVLGLVH +W PIP  +KDYIA PKPNGYQSLHTT+I         LEVQIRT EM  
Sbjct: 302 CYHVLGLVHALWPPIPGRVKDYIAQPKPNGYQSLHTTVI---TPGGLPLEVQIRTREMHR 358

Query: 485 IAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFV 544
           +AE G+AAH+   ++  GL     PN               +  R+ W+  ++EWQ +F 
Sbjct: 359 VAEYGVAAHW---LYKEGLTD---PN--------------QLKRRVKWIELLQEWQRDFT 398

Query: 545 GNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVN 604
              TSR+FV+ +  DLL  RVFVFTP+G + +LPKG+T VD+AY IHTE+G++M+ AKV 
Sbjct: 399 ---TSRDFVEAVQHDLLSGRVFVFTPKGRVIDLPKGSTPVDFAYHIHTEVGHRMIGAKVG 455

Query: 605 GNLVSPTHVLANAEVVEIITYNVS 628
           G +V  ++ L N ++VEI+T   S
Sbjct: 456 GKIVPLSYELRNGDIVEILTSKSS 479


>gi|145346824|ref|XP_001417882.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144578110|gb|ABO96175.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 766

 Score =  447 bits (1150), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 260/562 (46%), Positives = 339/562 (60%), Gaps = 65/562 (11%)

Query: 126 SPERLWE-DLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
           +PE LW  +L   + YL   E   VR AL +AF AHDGQ R+SGEP+I HPV VA IL E
Sbjct: 30  TPEFLWNTELARRVRYLDEFERAEVRDALEVAFNAHDGQARKSGEPYITHPVAVAAILAE 89

Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENH- 243
           +ELD ES+ AGLLHDTVEDT+ VTFE +E+ +G  VRRIVEGETKVSK+     K     
Sbjct: 90  MELDHESLVAGLLHDTVEDTDAVTFESLEKRYGTAVRRIVEGETKVSKVSSSLSKESQQI 149

Query: 244 ---SVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVF 300
              S +DVK++DL QMFLAMTEEVR+IIVKLADRLHNMRTL  + P K+  IA ETL VF
Sbjct: 150 NGTSAEDVKSEDLAQMFLAMTEEVRIIIVKLADRLHNMRTLEGLKPEKRVKIANETLLVF 209

Query: 301 APLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIED 360
           APLAKLLGMY++K+ELE+LSF Y N + YA++ RR  +L K+ E  ++ A   L + ++ 
Sbjct: 210 APLAKLLGMYKVKNELEDLSFRYANPDAYAEMSRRCDELSKQQESVIQRAAVTLQETMQG 269

Query: 361 DQFLDLMTVKTEIRSVCKEPYSIYK-----------AVLKSRGSINEVNQIAQLRIIIKP 409
           D FL   TV   I++  KE Y +++           A+     +I+++ ++AQLR+I+  
Sbjct: 270 DDFLRGNTVGVTIQAKAKELYGLHRKLSAGGRRSGSALNGDSKNIDDIFEVAQLRVILHD 329

Query: 410 KPC----SGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPF 465
                  +G        ++CYHVLG+VH +W P+P  MKDYIATPK NGY++LHT ++P 
Sbjct: 330 TGAMAGMTGEARRLQASRVCYHVLGIVHAMWPPVPGNMKDYIATPKLNGYKALHTVILPI 389

Query: 466 LYES-----------MFRLEVQIRTEEMDLIAERGIAAHYSGR-----------VFVTGL 503
             +            +F +E+ IRTE M ++AE GIAA    R             +   
Sbjct: 390 SPDDANPTGGIEETPVFPMEIMIRTEAMHILAENGIAADAEIRQQWRAGARRTSRALRAR 449

Query: 504 VGHARPNGRSPRGKTVCLN---------------------NANIALR-ISWLNAIREWQE 541
                    S  G+ V L                      N + +LR ++WL  I+ WQ+
Sbjct: 450 RRAELRYAASQEGRDVDLKALEREEALDMAAAAADKGTEENVDASLRQVAWLKNIQSWQK 509

Query: 542 EFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAA 601
           EF+  +++REFVDTIT DLLG RVFVFTP+G++ NLP GATVVDYA+    E G  M  A
Sbjct: 510 EFIDVLSAREFVDTITSDLLGRRVFVFTPKGQVTNLPHGATVVDYAFYT-GETGMLMEYA 568

Query: 602 KVNGNLVSPTHVLANAEVVEII 623
           KVNG  V   HVL NAEVVEI 
Sbjct: 569 KVNGVQVEFDHVLTNAEVVEIF 590


>gi|255084529|ref|XP_002508839.1| predicted protein [Micromonas sp. RCC299]
 gi|226524116|gb|ACO70097.1| predicted protein [Micromonas sp. RCC299]
          Length = 584

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 247/526 (46%), Positives = 325/526 (61%), Gaps = 42/526 (7%)

Query: 130 LWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDW 189
           L++ +R  + YL+  E   V+ A  +AF AHDGQKR+SGEPF+ HPV VA IL +  +D 
Sbjct: 8   LYDSIRDKLGYLTDYERSEVKDATRMAFNAHDGQKRKSGEPFVTHPVAVAGILADQRMDH 67

Query: 190 ESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVK 249
           E++ AGLLHDTVEDT+ VTFE I+E FG  VRRIVEGETKVSK+   +      +VQ   
Sbjct: 68  ETVIAGLLHDTVEDTDAVTFESIQERFGPAVRRIVEGETKVSKVSSSQALAAAANVQ--- 124

Query: 250 ADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGM 309
           ADDL++MFLAMT++VRVIIVKLADRLHNMRTL  + P K+  IA ETL VFAPLAKLLGM
Sbjct: 125 ADDLKEMFLAMTQDVRVIIVKLADRLHNMRTLGALKPEKRVKIARETLLVFAPLAKLLGM 184

Query: 310 YQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTV 369
           Y +K+ELE L+F Y   E +A+  R   +L K  +  +  A + L    + D+FL     
Sbjct: 185 YNVKNELEELAFRYAAPETHAETARWFDELTKRQDPVVRRAAEELQALCDKDEFLKQACS 244

Query: 370 KTEIRSVCKEPYSIYKAVLKSRG--------SINEVNQIAQLRIIIKPK---PCSGVGPL 418
           K E+    KE Y +++   ++ G        ++  VN++AQLR+I+  +      G    
Sbjct: 245 KVEVLPRAKEFYGLFR---RANGGSKPGEIDNLRRVNEVAQLRVILHLRGDDESDGEYAA 301

Query: 419 CS------PQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPF------- 465
            S        ++CY  L +VH +W P+P  MKDYIATPK NGY++LHT ++P        
Sbjct: 302 MSEARRMVSSRVCYQALSMVHALWPPVPGRMKDYIATPKLNGYRALHTVVLPIGSDQQGS 361

Query: 466 -------LYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKT 518
                  +   +F LE+QIRT +M  +AE GIAA   G V        A+   R  R   
Sbjct: 362 APERQGPIETEVFPLELQIRTYDMHRMAESGIAA--DGEV-KAAWRATAKRTARKLRKLR 418

Query: 519 VCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLP 578
               +A+  +++ WL+ IREWQEEF+G +T+ EFVDT+T DLLG RVFVFTP G + NLP
Sbjct: 419 RRAADADGDVKVEWLSNIREWQEEFLGVITAEEFVDTVTGDLLGRRVFVFTPSGGVMNLP 478

Query: 579 KGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
            GATVVDYA+  +T+ G  MV AKVNG  V     L NA+VVEIIT
Sbjct: 479 HGATVVDYAF--YTDAGLDMVEAKVNGVAVDFDTPLHNADVVEIIT 522


>gi|308804597|ref|XP_003079611.1| chloroplast RelA homologue 1 (ISS) [Ostreococcus tauri]
 gi|116058066|emb|CAL54269.1| chloroplast RelA homologue 1 (ISS) [Ostreococcus tauri]
          Length = 798

 Score =  430 bits (1105), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 264/588 (44%), Positives = 348/588 (59%), Gaps = 74/588 (12%)

Query: 113 LSPSVSSDA-----FKEDSPERLWE-DLRPTISYLSPNELELVRRALMLAFEAHDGQKRR 166
           ++P+ S DA     ++  +PE LW  +L     YL   E E VR AL LAF AHDGQ R+
Sbjct: 36  VAPNSSDDAELITGWEHITPEYLWNTELARRTKYLDAFEREEVRDALELAFTAHDGQARK 95

Query: 167 SGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEG 226
           SGEP+I HPV VA IL +LELD ES+ AGLLHDTVEDT+VVTFE +E+ +G  VR+IVEG
Sbjct: 96  SGEPYITHPVAVAAILADLELDHESLIAGLLHDTVEDTDVVTFESLEKRYGVAVRKIVEG 155

Query: 227 ETKVSKLGKLKCKNENH-------------SVQDVKADDLRQMFLAMTEEVRVIIVKLAD 273
           ETKVSK+     K+                S +DVK++DL QMFLAMTEEVR+IIVKLAD
Sbjct: 156 ETKVSKVSSSLSKDGAARNAPARGGPSAALSSEDVKSEDLAQMFLAMTEEVRIIIVKLAD 215

Query: 274 RLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVK 333
           RLHNMRTL  +   K+  IA ETL VFAPLAKLLGMY IK+ELE+L+F Y + E Y+   
Sbjct: 216 RLHNMRTLEGLKQEKRVKIAKETLLVFAPLAKLLGMYDIKNELEDLAFRYADPEAYSTTV 275

Query: 334 RRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSR-- 391
           RR+ ++ K  E  ++ A + +  ++  D FL    V   + +  KEPY ++++V  S   
Sbjct: 276 RRLEEVSKVQEPTIKLAFERIKSEMLQDDFLRGHAVAVSLGAKQKEPYGVHRSVRNSSAK 335

Query: 392 ----GSINE--VNQIAQLRIIIKPKPC----SGVGPLCSPQQICYHVLGLVHGIWTPIPR 441
               G+  E  + ++AQL+I++         S         +ICYHVLG+VH +W PIP 
Sbjct: 336 AGAFGANGEAAITEVAQLKIVLHDAQAVIGLSDEARRVQASRICYHVLGVVHAMWPPIPG 395

Query: 442 AMKDYIATPKPNGYQSLHTTLIPF------LYESMFRLEVQIRTEEMDLIAERGIAAHYS 495
            ++DY+ATPK NGY++LHT ++P       +  ++F LEV IRTE M+++A +GIA    
Sbjct: 396 ELRDYLATPKLNGYKALHTVVLPISPGASEVDAAVFPLEVIIRTEPMEMLATKGIACDDE 455

Query: 496 GR------VFVTGL---------------------VGHARPNGRSPRGKTVCLNN----- 523
            R         T L                     +  AR +    R + V   +     
Sbjct: 456 LRQQWRIGARRTSLALRAQRRQEKRISLAQKGRKDIDEARLDQEEARDEEVAAADAKRPG 515

Query: 524 --ANIAL---RISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLP 578
             A+ AL   +++WL  I+ WQ EF+  +++REFVDTIT DLLG RVFVFTP+G   NLP
Sbjct: 516 GAASTALAKSQVTWLKNIQAWQTEFIDVLSAREFVDTITSDLLGRRVFVFTPKGRALNLP 575

Query: 579 KGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITYN 626
            GATVVDYA+      G  M  AKVNG  V   HVL+NAEVVEI T N
Sbjct: 576 HGATVVDYAFYSDDTNGAHMSYAKVNGVRVDLDHVLSNAEVVEIFTDN 623


>gi|303280445|ref|XP_003059515.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226459351|gb|EEH56647.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 555

 Score =  417 bits (1072), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 239/489 (48%), Positives = 301/489 (61%), Gaps = 57/489 (11%)

Query: 162 GQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVR 221
           GQ+R+SGEPF+ HPV VA IL +  +D E++ AGLLHDTVEDT++VTFE I+E FGA VR
Sbjct: 22  GQRRKSGEPFVTHPVAVAGILADQRMDHETVIAGLLHDTVEDTDLVTFESIQERFGAAVR 81

Query: 222 RIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTL 281
           RIVEGETKVSK+      N       V+ADDL+QMFLAMT+EVRVI+VKLADR HNMRTL
Sbjct: 82  RIVEGETKVSKVSSSTKAN-------VQADDLQQMFLAMTQEVRVIVVKLADRTHNMRTL 134

Query: 282 SHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYK 341
             + P K+  IA ETL VFAPLAKLLGMY++K+ELE L+FM+   E +A   R   +L K
Sbjct: 135 WSLKPDKRRRIAQETLLVFAPLAKLLGMYKVKNELEELAFMHVAPEQHAITSRWFDELSK 194

Query: 342 EHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSR------GSIN 395
             E  +  A   L K  ++D FL     + EI+   KE Y +Y+     R      GS  
Sbjct: 195 RQEPVVTRAAAELQKMCDEDDFLKSACERVEIQCRAKELYGVYRKAGGERIPTAPPGSDA 254

Query: 396 EVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGY 455
           E   +  L   ++    S         ++CYHVLG+VH  W P+P  MKDYIATPK NGY
Sbjct: 255 ERESLELLSSRLRRALTS---------RLCYHVLGIVHAAWPPVPGRMKDYIATPKLNGY 305

Query: 456 QSLHTTLIPF------------LYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGL 503
           ++LHT + P               + +F LE+QIRTE+M  +AE GIAA    +  V   
Sbjct: 306 KALHTVVQPIGGGAKRGKWGEGGGDEVFPLELQIRTEDMHRMAECGIAADKEVKAAVLIK 365

Query: 504 VGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGS 563
            GH R                    +++WL  IREWQEEF+G +T+ EFVDTIT DLLG 
Sbjct: 366 SGHER--------------------QLAWLANIREWQEEFLGVLTAEEFVDTITGDLLGR 405

Query: 564 RVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEII 623
           RVFVFTP G + NLP G+TVVDYAY  +T++G  M+AAKVNG  V   + L+NA+VVEII
Sbjct: 406 RVFVFTPEGGVMNLPAGSTVVDYAY--YTDVGVDMIAAKVNGVDVDADYRLSNADVVEII 463

Query: 624 -TYNVSFSL 631
            T N    L
Sbjct: 464 ATENSGLEL 472


>gi|429221371|ref|YP_007183015.1| RelA/SpoT family (p)ppGpp synthetase [Deinococcus peraridilitoris
           DSM 19664]
 gi|429132234|gb|AFZ69249.1| (p)ppGpp synthetase, RelA/SpoT family [Deinococcus peraridilitoris
           DSM 19664]
          Length = 746

 Score =  409 bits (1051), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 225/495 (45%), Positives = 313/495 (63%), Gaps = 41/495 (8%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T+S  SP + + V RA   A  AHDG  R+SGEP+I HPV VA+IL +L +D + + AGL
Sbjct: 3   TLSDRSPEDQDRVARAYHFAERAHDGVLRKSGEPYITHPVTVAQILADLGMDTDGVIAGL 62

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHDTVEDT+V TFE++E++FG  VRRIVEGETKVSKL K+       ++ D ++++LRQM
Sbjct: 63  LHDTVEDTDV-TFEQVEQDFGVVVRRIVEGETKVSKLTKMSS-----NLHDEQSENLRQM 116

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AMT ++RVIIVKLADRLHNMRTL+ MP HKQ  IA ETL++FAPLA  LG+ QIK EL
Sbjct: 117 LIAMTGDIRVIIVKLADRLHNMRTLASMPAHKQQRIARETLEIFAPLAHRLGIGQIKWEL 176

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y + + Y  ++RR+     E E+ +  A + L   +E+D  L      T+I   
Sbjct: 177 EDLSFKYLDPDAYESLERRLRTRQSERERHIVGALEQLRATLEEDVELPEWVASTDITGR 236

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGV-------GPLCSPQQICYHVL 429
            K  YSI+  + K   S+ ++  +  +R+I++PKP                 +++CYH L
Sbjct: 237 GKHLYSIHNKMRKEGKSLEQIFDLLAVRVILRPKPVEAPPGKAKERAEDAREKRVCYHAL 296

Query: 430 GLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERG 489
           GLVH +WTPIP   KDYIA PKPNGYQSLHTT+I    +    +EVQIR++ M  +AE G
Sbjct: 297 GLVHSMWTPIPGRFKDYIAVPKPNGYQSLHTTVISTAGQP---IEVQIRSQRMHEVAEFG 353

Query: 490 IAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTS 549
           IAAH+   ++  G     + + RS               R +WL  +R+ Q +      +
Sbjct: 354 IAAHW---MYKQG----GKLDERS---------------RENWLVQLRQLQLDIT---DA 388

Query: 550 REFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVS 609
            +FVD +  DLL  RVFVFTP+G+  NLP+G+T VD+AY IH+ IG+  V A++NG++V 
Sbjct: 389 SDFVDAVKSDLLSGRVFVFTPKGDTVNLPQGSTPVDFAYHIHSRIGDTTVGARINGSIVP 448

Query: 610 PTHVLANAEVVEIIT 624
             + L N ++VEII+
Sbjct: 449 LGYQLKNGDMVEIIS 463


>gi|223998738|ref|XP_002289042.1| GTP pyrophosphokinase-like protein [Thalassiosira pseudonana
           CCMP1335]
 gi|220976150|gb|EED94478.1| GTP pyrophosphokinase-like protein [Thalassiosira pseudonana
           CCMP1335]
          Length = 505

 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 220/501 (43%), Positives = 319/501 (63%), Gaps = 35/501 (6%)

Query: 128 ERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELEL 187
           E  W+ L PT+SYL  +    V++AL +A+ AH  Q R+SGEPFIIHPVEVA +L  +++
Sbjct: 3   ESYWDSLLPTVSYLGTSNAAKVKQALRVAYRAHRSQMRKSGEPFIIHPVEVALLLSGMKM 62

Query: 188 DWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQD 247
           D E++ AGLLHDTVEDT++ TFE++E  FG  V+ IVEGETKVSKL K+   ++     D
Sbjct: 63  DAETVMAGLLHDTVEDTDL-TFEQVEAMFGVEVKNIVEGETKVSKLPKIMGFSD---FAD 118

Query: 248 VKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLL 307
            +A++LRQMF+AMT++ R+IIVKLADRLHNMRTL HM P KQ  I+ ETL +FAPLA  +
Sbjct: 119 EQAENLRQMFIAMTDDYRIIIVKLADRLHNMRTLRHMKPEKQKKISRETLDIFAPLAHRM 178

Query: 308 GMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLM 367
           G++Q KSELE+ +F Y   E+Y  + +R+     +    L+ + ++L   +++D  L   
Sbjct: 179 GIWQFKSELEDTAFKYLYPEEYKLLNQRLLQRRDKIINTLDNSIQVLEHTLKNDPTLRSQ 238

Query: 368 TVKTEIRSVCKEPYSIY-KAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLC-SPQQIC 425
            V+ E+    KE YS++ K  +K   ++N +  +  LR+I+KP   +G      S   +C
Sbjct: 239 DVEIEVVGRTKELYSLWHKMEMKHDRNLNHITDLVALRVILKPGESNGKDQGADSGVWLC 298

Query: 426 YHVLGLVHGI--WTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMD 483
           YHVLGLV  +  + P+P  +KDYI+ PK NGYQSLHT L   +Y+    +EVQIRT+ M 
Sbjct: 299 YHVLGLVQHLPGFQPVPTKVKDYISFPKVNGYQSLHTAL---MYKGQ-SVEVQIRTQFMH 354

Query: 484 LIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEF 543
            +AE G+A+H++ +                 +  ++ L N        WL++I+EWQ++ 
Sbjct: 355 QVAEYGMASHWAYK--------------DEKKRNSMGLYNT------PWLSSIKEWQQDA 394

Query: 544 VGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKV 603
           V   +SR+FVD + R+LLG RVFVF   G+I NL +GAT VD A+ IHTE+G +M   ++
Sbjct: 395 V---SSRDFVDCVRRELLGKRVFVFLRNGKILNLARGATAVDAAFQIHTELGLQMHGVEI 451

Query: 604 NGNLVSPTHVLANAEVVEIIT 624
           NG  V  ++ L N +VV I+T
Sbjct: 452 NGKPVPISYELKNGDVVSILT 472


>gi|452821782|gb|EME28808.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [Galdieria
           sulphuraria]
          Length = 776

 Score =  392 bits (1006), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 225/518 (43%), Positives = 317/518 (61%), Gaps = 57/518 (11%)

Query: 128 ERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELEL 187
           E  W  L   ++Y S ++L +++ AL LA++AH+ QKR SG+PFI HPV VA IL EL +
Sbjct: 85  EYYWSQLETQLTYHSTSDLRVIKSALQLAYQAHELQKRHSGDPFITHPVAVANILAELRM 144

Query: 188 DWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQD 247
           D ++I AGLLHDTVEDT V T   IE+ FG  VRRIVEGETKVSKL K+     + S+ D
Sbjct: 145 DRDTIVAGLLHDTVEDTEV-TLSTIEQLFGMEVRRIVEGETKVSKLPKMA----DISI-D 198

Query: 248 VKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLL 307
            +A++LRQ+F+AMTE+ R+IIVKLADRLHNMRTL  M   K+  IA ETL +FAPLA  L
Sbjct: 199 KQAENLRQLFIAMTEDWRIIIVKLADRLHNMRTLQFMKQAKRHKIAKETLDIFAPLAHRL 258

Query: 308 GMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLM 367
           GM+QIK+ELE L FMY    +Y ++++ V     ++ + LEE+ + L   +++D  L   
Sbjct: 259 GMWQIKAELERLGFMYLYPSEYEEIRQLVEKKLPKYMRVLEESRQALKTALQNDVILQQS 318

Query: 368 TVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKP-----CSGVGPLCSP- 421
             + E+ +  KE YS++K + +    I ++  +  LR++I PKP     CS     C+  
Sbjct: 319 VAQVEVSARIKELYSLWKKMQQHGKDIEDIYDLVALRVLITPKPMQLECCSSDASQCNEW 378

Query: 422 ---------QQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFR 472
                    + +CY+ LG+VH +W P P  +KDYIA PK NGYQSLHTT++    ++   
Sbjct: 379 NRKMLETLEKSLCYYTLGIVHAMWQPFPCRVKDYIAFPKENGYQSLHTTVMAGGAQA--P 436

Query: 473 LEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRIS- 531
           LEVQIRT EM L+AE G+AAH+  +                        N+  IA + + 
Sbjct: 437 LEVQIRTLEMHLVAEYGMAAHWMYKD-----------------------NSVVIASKATR 473

Query: 532 WLNAIREWQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRG-------EIKNLPKGATVV 584
           W++ I EW +E      SREFV+ + R+LLGSRVFVF           EI NLP+G+T+V
Sbjct: 474 WMSTIVEWGDEIAN---SREFVELVRRELLGSRVFVFAKFESYSDRCLEIFNLPRGSTIV 530

Query: 585 DYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEI 622
           D A+ + + +G +M  A+V+G +V   ++L NA+VV I
Sbjct: 531 DIAFQLDSCLGLRMTCARVHGKIVPFWYILENADVVTI 568


>gi|320334134|ref|YP_004170845.1| (p)ppGpp synthetase I SpoT/RelA [Deinococcus maricopensis DSM
           21211]
 gi|319755423|gb|ADV67180.1| (p)ppGpp synthetase I, SpoT/RelA [Deinococcus maricopensis DSM
           21211]
          Length = 748

 Score =  390 bits (1003), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 216/500 (43%), Positives = 306/500 (61%), Gaps = 41/500 (8%)

Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
           EDLR  +   S  E E + RA   A +AHDG  R+SGEP+I HPV VA IL EL +D ++
Sbjct: 2   EDLRRAVQERSLEEREKIERAYEFARDAHDGVLRKSGEPYITHPVAVALILAELGMDTDA 61

Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
           I AG LHDTVEDT+V TF++IE+ FG  VRRIVEGETKVSKL K     +  S+QD +++
Sbjct: 62  ICAGFLHDTVEDTDV-TFQQIEDHFGRDVRRIVEGETKVSKLTK-----QTTSLQDQQSE 115

Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
           +LRQM +AMT+++R+I+VKLADRLHNMRTL  M P KQ  I+ ET++++APLA  LG+ Q
Sbjct: 116 NLRQMLIAMTDDIRIIVVKLADRLHNMRTLGSMRPDKQQRISRETIEIYAPLAHRLGIGQ 175

Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
           IK ELE+LSF Y   E YA + RR+     + E  ++ A + L + + +D  L       
Sbjct: 176 IKWELEDLSFKYLEPEAYADLARRLRTRQDQREAHVKLALQQLREALTEDLELPEWIDNI 235

Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSG-------VGPLCSPQQI 424
           +I    K  YSI+  + K   ++ ++  +  +R+I+ PKP +               +++
Sbjct: 236 DIAGRSKHLYSIHTKMRKEGKALEQIFDLLAIRVILTPKPVNAPEGKQKDRAEEVREKRV 295

Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDL 484
           CYH LG+VH +WTPIP   KDYIA PKPNGYQSLHTT+I    +    +EVQIR+  M  
Sbjct: 296 CYHSLGIVHSMWTPIPGRFKDYIAVPKPNGYQSLHTTVISTEGQP---IEVQIRSRRMHE 352

Query: 485 IAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFV 544
           +AE G+AAH+  +                 +G  +   N     R  W+  +++ Q E  
Sbjct: 353 VAEYGVAAHWMYK-----------------QGDRLGEKN-----REGWIAQLKQLQSEIA 390

Query: 545 GNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVN 604
               + +FVD +  D+L  RVFVFTP+G+  +LP+G++ VD+AY IH+ IG+  V A+VN
Sbjct: 391 ---DASDFVDAVKSDILSGRVFVFTPKGDTVSLPQGSSPVDFAYHIHSRIGDTTVGARVN 447

Query: 605 GNLVSPTHVLANAEVVEIIT 624
           G++V     L N ++VE+IT
Sbjct: 448 GSIVPLGSELKNGDMVEVIT 467


>gi|94985409|ref|YP_604773.1| (p)ppGpp synthetase I SpoT/RelA [Deinococcus geothermalis DSM
           11300]
 gi|94555690|gb|ABF45604.1| (p)ppGpp synthetase I, SpoT/RelA [Deinococcus geothermalis DSM
           11300]
          Length = 766

 Score =  390 bits (1003), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 218/511 (42%), Positives = 309/511 (60%), Gaps = 42/511 (8%)

Query: 127 PERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELE 186
           P+   E+LRP I+     E   + RA + A +AH G  R+SGEP+I HPV VA IL  L 
Sbjct: 9   PQHGMEELRPLIADRPEQERARIERAYVFARDAHAGVNRKSGEPYITHPVAVATILARLG 68

Query: 187 LDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNEN--HS 244
           +D +SI AGLLHDTVED + VTFE IE EFG  VRRIVEGETKVSKL K   +      +
Sbjct: 69  MDTDSIMAGLLHDTVEDVDGVTFEVIEREFGPDVRRIVEGETKVSKLSKQGSQQAEVRDT 128

Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
            +D++A++LRQM +AMT+++R+I+VKLADRLHNMRTL  M P KQ  IA ET+ +FAPLA
Sbjct: 129 GRDLQAENLRQMLIAMTDDLRIIVVKLADRLHNMRTLGAMKPEKQQRIARETMDIFAPLA 188

Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
             LG+ QIK ELE+L+F Y   + YA ++ R+    +E +  +++A   L + +EDD  L
Sbjct: 189 HRLGIGQIKWELEDLAFQYLQPDAYAYLQSRLRTRQEERDALIQQAVTQLREALEDDLEL 248

Query: 365 DLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGP------- 417
                  +I    K  +SI+  + +   ++ ++  +  +R+I+ P+P S V P       
Sbjct: 249 PEWVSDIDIAGRSKHLWSIHNKMQRENKTLEQIFDLLAIRVILTPRPLS-VPPGTDEKRR 307

Query: 418 ----LCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRL 473
                   ++ICYH + +VH IWTP+P   KDYIA PKPNGYQSLHTT+I    +S   +
Sbjct: 308 ERAEETREKRICYHTVSIVHSIWTPLPGRFKDYIAVPKPNGYQSLHTTVI---SQSGQPI 364

Query: 474 EVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWL 533
           EVQIR+  M  +AE G+AAH+  +                 +G T+   +     R +W+
Sbjct: 365 EVQIRSRRMHEVAEYGVAAHWMYK-----------------QGATLAQKD-----RENWI 402

Query: 534 NAIREWQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTE 593
             +RE Q E      + +++D +  D+L  RV VFTP+G   +LP G+T +D+AY IHT 
Sbjct: 403 AQLRELQNEI---NDASDYLDAVKTDILSQRVRVFTPKGLAISLPVGSTPIDFAYHIHTR 459

Query: 594 IGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
           IG   V A+VNG++V  +H L N ++VEI+T
Sbjct: 460 IGETTVGARVNGSIVPLSHKLQNGDMVEIVT 490


>gi|219115159|ref|XP_002178375.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217410110|gb|EEC50040.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 511

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 219/499 (43%), Positives = 311/499 (62%), Gaps = 41/499 (8%)

Query: 136 PTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAG 195
           PT+SYL  + +  + +AL +A+ AH GQ R+SGEPFI+HPVEV+ +L  L++D E++ +G
Sbjct: 2   PTVSYLGTDAVAKIYQALCVAYRAHRGQMRKSGEPFIVHPVEVSLLLSGLKMDAETVMSG 61

Query: 196 LLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQ 255
           LLHDTVEDT++ TF+++E  FG TVR IVEGETKVSKL KL          D +A++LRQ
Sbjct: 62  LLHDTVEDTDL-TFQQVETLFGHTVRSIVEGETKVSKLPKLAFAE----YADEQAENLRQ 116

Query: 256 MFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSE 315
           MF+AMT + R+IIVKLADRLHNMRTL +M   KQ  I+ ETL +FAPLA  +G++Q KSE
Sbjct: 117 MFVAMTSDYRIIIVKLADRLHNMRTLRYMKSEKQIKISRETLDIFAPLAHRMGIWQFKSE 176

Query: 316 LENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRS 375
           LE+ SFMY   ++Y ++ RR+    +  ++ LE+A  IL +++  D  L     K E+  
Sbjct: 177 LEDTSFMYLYPQEYKRLNRRLRLHQQSFQETLEKAQDILQRQLNLDSTLQQQAYKVEVSG 236

Query: 376 VCKEPYSIY-KAVLKSRGSINEVNQIAQLRIIIKPKPCS---GVGPLCSPQQ----ICYH 427
             KE YS++ K   K+  +++ +  +  LR++I P+  S       L +       +CYH
Sbjct: 237 RTKEIYSLWHKMETKNVQNLDHIVDVVALRVVISPRDKSVEADKSELSNDSDRGVWLCYH 296

Query: 428 VLGLVHGI--WTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLI 485
            LGLV  +  + P+P  +KDYI+ PKPNGYQSLHT LI     +   +EVQIRT  M  +
Sbjct: 297 ALGLVQHLPGFVPVPTRVKDYISFPKPNGYQSLHTALIL----NGQTIEVQIRTSMMHQV 352

Query: 486 AERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVG 545
           AE G+A+H++                   RG    L +        WL++I+EWQ E V 
Sbjct: 353 AEYGMASHWA-------------YTDDKRRGSNEELYST------PWLSSIKEWQNEAV- 392

Query: 546 NMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNG 605
             +SR+FVD++ R+LLG RVFVF   G+I NL +GAT +D A+ IHTE+G  M   ++NG
Sbjct: 393 --SSRDFVDSVRRELLGKRVFVFLRNGKILNLARGATAIDAAFQIHTEVGLSMHGVEING 450

Query: 606 NLVSPTHVLANAEVVEIIT 624
             V  ++ L N +VV I+T
Sbjct: 451 KPVPLSYELQNGDVVSILT 469


>gi|397569561|gb|EJK46819.1| hypothetical protein THAOC_34498 [Thalassiosira oceanica]
          Length = 989

 Score =  384 bits (985), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 218/497 (43%), Positives = 307/497 (61%), Gaps = 41/497 (8%)

Query: 128 ERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELEL 187
           E  W+ L PT+SYL       +++AL +A+ AH  QKR+SGEP+IIHPVEVA +L  +++
Sbjct: 259 EGYWDQLLPTVSYLGTENAAKIKKALRVAYCAHRPQKRKSGEPYIIHPVEVALLLSGMKM 318

Query: 188 DWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQD 247
           D +++ AGLLHDTVEDT++ TFE+IE  FG  V+ IVEGETKVSKL KL   +      D
Sbjct: 319 DADTVMAGLLHDTVEDTDL-TFEQIEAMFGTEVKNIVEGETKVSKLPKLAFAD----YAD 373

Query: 248 VKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLL 307
            +A++LRQMF+AMT++ R+IIVKLADRLHNMRTL HM P KQ  I+ ETL +FAPLA  +
Sbjct: 374 EQAENLRQMFIAMTDDYRIIIVKLADRLHNMRTLRHMKPAKQQKISRETLDIFAPLAHRM 433

Query: 308 GMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLM 367
           G++  KSELE+ +FMY   ++Y ++ +R+    K+ E+ L      L K ++ D  +   
Sbjct: 434 GLWPFKSELEDTAFMYLYPDEYTRLNQRLRLRQKKFEETLTNTVNALEKTLQSDPTIQSQ 493

Query: 368 TVKTEIRSVCKEPYSIY-KAVLKSRGSINEVNQIAQLRIIIKPKPCSGVG----PLCSPQ 422
            V+ E+    KE YS++ K  +K   +++ +  +  LR+I+ P+  S  G    P  S  
Sbjct: 494 DVEIEVVGRTKELYSLWHKMEMKHDRNLDHITDLVALRVILTPRGKSKGGADGDPADSGT 553

Query: 423 QICYHVLGLVHGI--WTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTE 480
            +CYHVLGLV  +  + P+P  +KDYI+ PKPNGYQSLHT L+     S   +EVQIRT 
Sbjct: 554 WLCYHVLGLVQHLPGFQPMPTKVKDYISFPKPNGYQSLHTALM----YSGQSIEVQIRTA 609

Query: 481 EMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQ 540
            M  +AE G+A+H++ +                     +    +N      WL++I+EWQ
Sbjct: 610 YMHQVAEYGMASHFAYK-------------------DEMKRKESNELYNTPWLSSIKEWQ 650

Query: 541 EEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVA 600
           ++ V    SR+FVD+I  +LLG RVFVF   G+I NL KGAT VD A+ IHTE+G  M  
Sbjct: 651 QDKV---CSRDFVDSIREELLGRRVFVFLRNGKILNLSKGATAVDAAFSIHTEVGLGMHG 707

Query: 601 AKVNGNLVSPTHVLANA 617
            ++NG    P   L +A
Sbjct: 708 VEINGK---PNSYLVDA 721


>gi|325282797|ref|YP_004255338.1| (p)ppGpp synthetase I, SpoT/RelA [Deinococcus proteolyticus MRP]
 gi|324314606|gb|ADY25721.1| (p)ppGpp synthetase I, SpoT/RelA [Deinococcus proteolyticus MRP]
          Length = 764

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 219/505 (43%), Positives = 304/505 (60%), Gaps = 40/505 (7%)

Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
           E LR  ++     E +L+ RA   A EAH G  R+SGE +I HPV VA IL EL +D  S
Sbjct: 9   EHLRGLVAERPEAERDLIERAYDFAREAHAGVVRKSGEEYITHPVAVATILAELGMDTTS 68

Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS--VQDVK 249
           IAAGLLHDTVED + VTFE I  +FG  V RIVEGETKVSKL K   +    S   +D++
Sbjct: 69  IAAGLLHDTVEDVDGVTFEVITAQFGPEVSRIVEGETKVSKLSKAGSQTAEVSDDGRDMQ 128

Query: 250 ADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGM 309
           A++LRQM +AMT+++R+I+VKLADRLHNMRT+  MPP KQ  I+ ET++VFAPLA  LG+
Sbjct: 129 AENLRQMLIAMTDDLRIIVVKLADRLHNMRTMDAMPPEKQKRISRETMEVFAPLAHRLGI 188

Query: 310 YQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTV 369
            Q+K ELE+LSF Y   E+YA+++ R+     E +  +++A + L   +EDD  L     
Sbjct: 189 GQVKWELEDLSFRYLYPEEYAELRSRLRMQLDERDGIVKQAEESLRSALEDDLELPDWVA 248

Query: 370 KTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPC---SGVGP-------LC 419
             +I    K  +SI+  + +   ++ ++  +  LR+I+ P+      G  P         
Sbjct: 249 AIDISGRSKHLWSIFGKMRREGKALEQIFDLMALRVILTPRRVEAREGTDPERLARAEEM 308

Query: 420 SPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRT 479
             ++ICYH + +VH +WTP+P   KDYIA PKPNGYQSLHTT+I    +S   +E+QIR+
Sbjct: 309 REKRICYHTISIVHSLWTPLPGRFKDYIAVPKPNGYQSLHTTVIG---KSGQPIEIQIRS 365

Query: 480 EEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREW 539
             M  +AE G+AAH+   ++  G                      N   R  W++ +RE 
Sbjct: 366 SRMHEVAEYGVAAHW---MYKQG-------------------GQLNQRERDQWIDQLREL 403

Query: 540 QEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMV 599
           Q E VG+ T  E++DT+  D L  RV VFTP+G   +L  G+T VD+AY IHT IG  MV
Sbjct: 404 QNE-VGDAT--EYMDTVKNDFLSQRVRVFTPKGLAISLTAGSTPVDFAYHIHTRIGETMV 460

Query: 600 AAKVNGNLVSPTHVLANAEVVEIIT 624
            A+VNG +V  +  L N ++VEI+T
Sbjct: 461 GARVNGKIVPLSQKLQNGDMVEILT 485


>gi|6647734|sp|O52177.1|RELA_MYXXA RecName: Full=GTP pyrophosphokinase; AltName: Full=(p)ppGpp
           synthase; AltName: Full=ATP:GTP
           3'-pyrophosphotransferase; AltName: Full=ppGpp synthase
           I
 gi|2736190|gb|AAB97677.1| (p)ppGpp synthetase [Myxococcus xanthus]
          Length = 757

 Score =  377 bits (968), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 210/503 (41%), Positives = 309/503 (61%), Gaps = 56/503 (11%)

Query: 124 EDSPERLWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARIL 182
           +DSPER      PT+S   P+ +L+++++A + + + H GQ R+SGEP+++HP+EVA IL
Sbjct: 19  DDSPERH----PPTVSQYHPDPDLDIIKKAYVYSAKVHQGQLRKSGEPYLVHPLEVAGIL 74

Query: 183 GELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNEN 242
           GEL+LD  SI  GLLHDT+EDT + T E + E FG+ V  +V+G TK+SK       + +
Sbjct: 75  GELKLDEASIVTGLLHDTIEDT-LATEEELTELFGSEVAHLVDGVTKLSKF----SASAS 129

Query: 243 HSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAP 302
            S ++ +A++ R+M +AM +++RVI+VKLADR HNMRTL HM   KQ+ IA ETL ++AP
Sbjct: 130 LSQEEKQAENFRKMIIAMAQDIRVILVKLADRTHNMRTLDHMSEEKQARIAQETLDIYAP 189

Query: 303 LAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQ 362
           LA  LG+  IK+ELE+LSF Y   +++  ++ ++    KE EK +E+   ++  K+ +  
Sbjct: 190 LANRLGISWIKTELEDLSFRYVKPQEFFALQAKLNKRKKEREKYIEDTCDLIRSKLAE-- 247

Query: 363 FLDLMTVKTEIRSVCKEPYSIYKAVLKSRG-SINEVNQIAQLRIIIKPKPCSGVGPLCSP 421
                 +K E+    K  YSIYK + KS+G   ++++ I   RII    P          
Sbjct: 248 ----RGLKGEVSGRFKHVYSIYKKI-KSQGIDFDQIHDIIAFRIIAPTAPS--------- 293

Query: 422 QQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEE 481
              CY  LGLVH +W P+P   KD+IA PKPN YQSLHTT+I  L E   R+EVQIRT E
Sbjct: 294 ---CYEALGLVHEMWKPVPGRFKDFIAIPKPNMYQSLHTTIIGPLSE---RVEVQIRTSE 347

Query: 482 MDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQE 541
           M  IAE GIAAH+                 +   GK V   +     + +WL  + EWQ+
Sbjct: 348 MHKIAEEGIAAHW-----------------KYKEGKAVISKDDE---KFAWLRQLMEWQQ 387

Query: 542 EFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAA 601
           +       +EF++T+  DL    VFVFTP+G++++LP+GAT VD+AY IH+++GN+ V A
Sbjct: 388 DL---KDPKEFLETVKVDLFTDEVFVFTPKGDVRSLPRGATPVDFAYAIHSDVGNRCVGA 444

Query: 602 KVNGNLVSPTHVLANAEVVEIIT 624
           KVNG +V   + + N + VE++T
Sbjct: 445 KVNGKIVPLRYKMKNGDTVEVLT 467


>gi|392412123|ref|YP_006448730.1| (p)ppGpp synthetase, RelA/SpoT family [Desulfomonile tiedjei DSM
           6799]
 gi|390625259|gb|AFM26466.1| (p)ppGpp synthetase, RelA/SpoT family [Desulfomonile tiedjei DSM
           6799]
          Length = 737

 Score =  376 bits (965), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 205/486 (42%), Positives = 297/486 (61%), Gaps = 52/486 (10%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           SY    +L+L+R A + + + H GQ RRSGEP+++HPV V+ IL +++LD  S+A GLLH
Sbjct: 35  SYYPDADLDLIRAAYVYSAQVHLGQTRRSGEPYLVHPVAVSMILAQMKLDEASVATGLLH 94

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           DTVEDT + T E IE  FG  +  +V+G TK+SK+       E  S ++ +A++ R+M L
Sbjct: 95  DTVEDT-LATLEEIERFFGKEIAALVDGVTKISKI-------EFQSKEERQAENFRKMIL 146

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM+ ++RV++VKLADRLHNMRTL  MPP  Q  IA ETL ++APLA  LG+Y +++ELE+
Sbjct: 147 AMSRDIRVLMVKLADRLHNMRTLGPMPPDAQVRIARETLDIYAPLAARLGIYWMRTELED 206

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
           L+F Y N E Y+ + RR+ +  K+ E+      +I+ +KIE         +K  I+   K
Sbjct: 207 LAFRYVNPERYSTIARRLEESLKQREEYANNVLRIITEKIEQ------YNIKGTIKGRNK 260

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
           E +SI++ ++      ++++ +   RII+     + V         CY VLGL+H +W P
Sbjct: 261 EIFSIHQKMITQHLDFDQIHDLTAFRIIL-----NNVSE-------CYAVLGLIHSLWRP 308

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PK NGYQSLHTT+I        R+E+QIR+ EMDLIAE GIAAH+S + 
Sbjct: 309 VPGRFKDYIAMPKSNGYQSLHTTVIG---PEGLRIEIQIRSTEMDLIAEEGIAAHWSYK- 364

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                       GR P         A  A  ++WL  + EWQ++       REF + +  
Sbjct: 365 -----------EGRIP--------EAEDAKVVNWLRQMMEWQQDL---DDPREFFENVRV 402

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           DL    V+VFTP+GE++  PKGAT +D+AY IHTE+G++ V A++NG +VS  + L   +
Sbjct: 403 DLYPDEVYVFTPKGEVREFPKGATPLDFAYAIHTEVGHRCVGARINGKMVSLKYQLRTGD 462

Query: 619 VVEIIT 624
            VEIIT
Sbjct: 463 SVEIIT 468


>gi|226356444|ref|YP_002786184.1| GTP diphosphokinase [Deinococcus deserti VCD115]
 gi|226318434|gb|ACO46430.1| putative GTP diphosphokinase (ppGpp synthetase I) (RelA/SpoT) (GTP
           pyrophosphokinase) [Deinococcus deserti VCD115]
          Length = 760

 Score =  375 bits (963), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 212/505 (41%), Positives = 305/505 (60%), Gaps = 42/505 (8%)

Query: 133 DLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESI 192
           +LR  +     ++ + +  A   A +AH+G  R+SGEP+I HPV VA IL  L +D ES+
Sbjct: 3   ELRALVGGRLQSDRDRIELAYEFARDAHEGVNRKSGEPYITHPVAVAVILARLGMDTESV 62

Query: 193 AAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNEN--HSVQDVKA 250
            AGLLHDTVED   VTFE IEE FG  VRRIVEGETKVSKL K   +     H+ +D++A
Sbjct: 63  MAGLLHDTVEDVEGVTFESIEELFGPDVRRIVEGETKVSKLSKQGSQQAEVAHTGRDMQA 122

Query: 251 DDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMY 310
           ++LRQM +AMT ++R+I+VKLADRLHNMRTL  M P KQ  IA ET+++FAPLA  LG+ 
Sbjct: 123 ENLRQMLIAMTADIRIIVVKLADRLHNMRTLGSMKPEKQQRIARETMEIFAPLAHRLGIG 182

Query: 311 QIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVK 370
           +IK ELE+LSF Y   +DYA ++ R+    +E +  ++ A K L + +EDD  L     +
Sbjct: 183 KIKWELEDLSFQYLQPDDYAYLQSRLRTRQEERDALIQGAVKQLREALEDDLELPEWVGE 242

Query: 371 TEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGP-----------LC 419
            +I    K  +SI+  + +   ++ ++  +  +R+I+ PK    V P             
Sbjct: 243 IDIAGRSKHLWSIHTKMKREGKALEQIFDLLAIRVILTPKDLI-VPPGTDEKRRERAEET 301

Query: 420 SPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRT 479
             ++ICYH + +VH +WTP+P   KDYIA PKPNGYQSLHTT+I    +S   +EVQIR+
Sbjct: 302 REKRICYHTVSIVHSMWTPLPGRFKDYIAVPKPNGYQSLHTTVIS---QSGQPIEVQIRS 358

Query: 480 EEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREW 539
             M  +AE G+AAH+   ++  G    AR                    R +W++ ++E 
Sbjct: 359 RRMHEVAEYGVAAHW---MYKQGAQLAARD-------------------RENWISQLKEL 396

Query: 540 QEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMV 599
           Q E      + +++D +  D+L  RV VFTP+G   +LP G+T +D+AY IHT IG   V
Sbjct: 397 QNEI---NDASDYMDAVKSDILSQRVRVFTPKGLAISLPAGSTSIDFAYHIHTRIGETTV 453

Query: 600 AAKVNGNLVSPTHVLANAEVVEIIT 624
            ++VNG++V  +H L N ++VEI+T
Sbjct: 454 GSRVNGSIVPLSHHLKNGDMVEIVT 478


>gi|405375362|ref|ZP_11029395.1| Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
           [Chondromyces apiculatus DSM 436]
 gi|397086374|gb|EJJ17492.1| Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
           [Myxococcus sp. (contaminant ex DSM 436)]
          Length = 740

 Score =  374 bits (959), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 207/497 (41%), Positives = 303/497 (60%), Gaps = 51/497 (10%)

Query: 129 RLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
           RL + L+    Y    +L+++++A + + + H GQ R+SGEP+++HP+EVA ILGEL+LD
Sbjct: 3   RLNDILQRVSQYHPDPDLDIIKKAYVYSAKVHQGQLRKSGEPYLVHPLEVAGILGELKLD 62

Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
             SI  GLLHDT+EDT + T E + E FG+ V  +V+G TK+SK       + + S ++ 
Sbjct: 63  EASIVTGLLHDTIEDT-LATAEELTELFGSEVAHLVDGVTKLSKF----SASASLSQEEK 117

Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
           +A++ R+M +AM +++RVI+VKLADR HNMRTL HM   KQ+ IA ETL ++APLA  LG
Sbjct: 118 QAENFRKMIIAMAQDIRVILVKLADRTHNMRTLDHMSEEKQARIAQETLDIYAPLANRLG 177

Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
           +  IK+ELE+LSF Y   +++  +  ++    KE EK +EE   ++  K+ +        
Sbjct: 178 ISWIKTELEDLSFRYVKPQEFFALSEKLNKRKKEREKYIEETCDVIRSKLAE------RG 231

Query: 369 VKTEIRSVCKEPYSIYKAVLKSRG-SINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYH 427
           +K E+    K  YSIYK + KS+G   ++++ I   RII    P             CY 
Sbjct: 232 LKGEVSGRFKHVYSIYKKI-KSQGIDFDQIHDIIAFRIIAPTAPS------------CYE 278

Query: 428 VLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAE 487
            LGLVH +W P+P   KD+IA PKPN YQSLHTT+I  L E   R+EVQIRTEEM  IAE
Sbjct: 279 ALGLVHEMWKPVPGRFKDFIAIPKPNMYQSLHTTIIGPLSE---RVEVQIRTEEMHKIAE 335

Query: 488 RGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNM 547
            GIAAH+                 +   GK V   +     + +WL  + EWQ++     
Sbjct: 336 EGIAAHW-----------------KYKEGKAVISKDDE---KFAWLRQLMEWQQDL---K 372

Query: 548 TSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNL 607
             +EF++T+  DL    VFVFTP+G++++LP+GAT VD+AY IH+++GN+ V AKVNG +
Sbjct: 373 DPKEFLETVKVDLFTDEVFVFTPKGDVRSLPRGATPVDFAYAIHSDVGNRCVGAKVNGKI 432

Query: 608 VSPTHVLANAEVVEIIT 624
           V   + + N + VE++T
Sbjct: 433 VPLRYKMKNGDTVEVLT 449


>gi|403237624|ref|ZP_10916210.1| GTP pyrophosphokinase [Bacillus sp. 10403023]
          Length = 729

 Score =  372 bits (956), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 208/504 (41%), Positives = 311/504 (61%), Gaps = 53/504 (10%)

Query: 126 SPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGEL 185
           +PE++ E+ +    YL+ N++E ++RA   A EAH  Q R+SGEP+IIHPV+VA IL +L
Sbjct: 8   TPEQVIENAK---KYLNDNDIEFIKRAYKFAEEAHKEQFRKSGEPYIIHPVQVAGILVDL 64

Query: 186 ELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSV 245
           E+D  +IA G LHD VEDTNV T + I + F + V  +V+G   V+KLGK+K K    S 
Sbjct: 65  EMDPSTIAGGFLHDVVEDTNV-TLQEISDAFSSEVAMLVDG---VTKLGKIKYK----SK 116

Query: 246 QDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAK 305
           ++ +A++ R+MF+AM +++RVI++KLADRLHNMRTL H+PP KQ  I+ ETL++FAPLA 
Sbjct: 117 EEQQAENHRKMFVAMAQDIRVILIKLADRLHNMRTLKHLPPEKQRRISNETLEIFAPLAH 176

Query: 306 LLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLD 365
            LG+ +IK ELE+ +  Y N + Y     R+ +L K+   E EE  + ++K+++D   +D
Sbjct: 177 RLGISRIKWELEDTALRYLNPQQYY----RIVNLMKKKRAEREEYLEEVIKEVKDR--VD 230

Query: 366 LMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQIC 425
            +++K +I    K  YSIY+ ++      NE+  +  +RI++            +  + C
Sbjct: 231 EVSIKADISGRPKHIYSIYRKMVLQNKQFNEIYDLLAVRIVV------------NSIKDC 278

Query: 426 YHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLI 485
           Y VLG++H  W P+P   KDYIA PKPN YQSLHTT+I    +    LEVQIRT EM  I
Sbjct: 279 YAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTVIGPKGDP---LEVQIRTVEMHQI 335

Query: 486 AERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVG 545
           AE GIAAH++ +                  GK V    ++   +++W   I EWQ +   
Sbjct: 336 AEYGIAAHWAYK-----------------EGKQVN-QQSSFEEKLTWFREILEWQNDATN 377

Query: 546 NMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNG 605
              + EF++++  DL    VFVFTP+G++  LP G+  +D+AY IH+EIGNK + AKVNG
Sbjct: 378 ---AEEFMESLKIDLFSDMVFVFTPKGDVIELPSGSVPIDFAYRIHSEIGNKTIGAKVNG 434

Query: 606 NLVSPTHVLANAEVVEIITYNVSF 629
            +V+  + L   +++EI+T   S+
Sbjct: 435 KMVTLDYTLKTGDIIEILTSKHSY 458


>gi|347753065|ref|YP_004860630.1| (p)ppGpp synthetase I SpoT/RelA [Bacillus coagulans 36D1]
 gi|347585583|gb|AEP01850.1| (p)ppGpp synthetase I, SpoT/RelA [Bacillus coagulans 36D1]
          Length = 729

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 210/493 (42%), Positives = 304/493 (61%), Gaps = 50/493 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YL+   +E+VR A   A +AH+GQKR+SGEP+IIHP++VA IL +LE+D  ++AAG 
Sbjct: 16  TKQYLNDEHVEMVRHACAFASKAHEGQKRKSGEPYIIHPIQVAGILADLEMDPSTVAAGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT+V T + + EEF   V  +V+G   V+KLGK+K K    S ++ +A++ R+M
Sbjct: 76  LHDVVEDTDV-TLDELREEFNDEVAMLVDG---VTKLGKIKYK----SHEEQQAENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
           F+AM +++RVI++KLADRLHNMRTL H+PP KQ  IA ETL++FAPLA  LG+  IK EL
Sbjct: 128 FVAMAQDIRVILIKLADRLHNMRTLKHLPPEKQRRIANETLEIFAPLAHRLGISAIKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+ S  Y N + Y     R+ +L K    E E+  + +++++++   L  + +K+EI   
Sbjct: 188 EDTSLRYLNPQQYY----RIVNLMKRKRAEREQYLQNVIEEVKER--LADIHIKSEISGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSIY+ +++     NE+  +  +RII+K              + CY VLG++H  W
Sbjct: 242 PKHIYSIYRKMVQQHKQFNEIYDLLAVRIIVKSI------------KDCYAVLGVIHTCW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA PKPN YQSLHTT+I    E    LEVQIRT EM  IAE G+AAH++ 
Sbjct: 290 KPMPGRFKDYIAMPKPNMYQSLHTTVIGPKGEP---LEVQIRTFEMHRIAEYGVAAHWAY 346

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +                  GKTV     +   ++SW   I E+Q +      + EF++++
Sbjct: 347 K-----------------EGKTVN-EKTSFEKKLSWFREILEFQND---TNNAEEFMESL 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             DL    VFVFTP+G++  LP G+  +D+AY IH+EIGNK + AKVNG +V+  + L  
Sbjct: 386 KIDLFSDMVFVFTPKGDVIELPSGSVPIDFAYRIHSEIGNKTIGAKVNGKMVTLDYQLKT 445

Query: 617 AEVVEIITYNVSF 629
            ++VEI+T   S+
Sbjct: 446 GDIVEILTSKHSY 458


>gi|336114504|ref|YP_004569271.1| (p)ppGpp synthetase I SpoT/RelA [Bacillus coagulans 2-6]
 gi|335367934|gb|AEH53885.1| (p)ppGpp synthetase I, SpoT/RelA [Bacillus coagulans 2-6]
          Length = 723

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 210/493 (42%), Positives = 304/493 (61%), Gaps = 50/493 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YL+   +E+VR A   A +AH+GQKR+SGEP+IIHP++VA IL +LE+D  ++AAG 
Sbjct: 10  TKQYLNDEHVEMVRHACAFASKAHEGQKRKSGEPYIIHPIQVAGILADLEMDPSTVAAGF 69

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT+V T + + EEF   V  +V+G   V+KLGK+K K    S ++ +A++ R+M
Sbjct: 70  LHDVVEDTDV-TLDELREEFNDEVAMLVDG---VTKLGKIKYK----SHEEQQAENHRKM 121

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
           F+AM +++RVI++KLADRLHNMRTL H+PP KQ  IA ETL++FAPLA  LG+  IK EL
Sbjct: 122 FVAMAQDIRVILIKLADRLHNMRTLKHLPPEKQRRIANETLEIFAPLAHRLGISAIKWEL 181

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+ S  Y N + Y     R+ +L K    E E+  + +++++++   L  + +K+EI   
Sbjct: 182 EDTSLRYLNPQQYY----RIVNLMKRKRAEREQYLQNVIEEVKER--LADIRIKSEISGR 235

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSIY+ +++     NE+  +  +RII+K              + CY VLG++H  W
Sbjct: 236 PKHIYSIYRKMVQQHKQFNEIYDLLAVRIIVKSI------------KDCYAVLGVIHTCW 283

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA PKPN YQSLHTT+I    E    LEVQIRT EM  IAE G+AAH++ 
Sbjct: 284 KPMPGRFKDYIAMPKPNMYQSLHTTVIGPKGEP---LEVQIRTFEMHRIAEYGVAAHWAY 340

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +                  GKTV     +   ++SW   I E+Q +      + EF++++
Sbjct: 341 K-----------------EGKTVN-EKTSFEKKLSWFREILEFQND---TNNAEEFMESL 379

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             DL    VFVFTP+G++  LP G+  +D+AY IH+EIGNK + AKVNG +V+  + L  
Sbjct: 380 KIDLFSDMVFVFTPKGDVIELPSGSVPIDFAYRIHSEIGNKTIGAKVNGKMVTLDYQLKT 439

Query: 617 AEVVEIITYNVSF 629
            ++VEI+T   S+
Sbjct: 440 GDIVEILTSKHSY 452


>gi|297623247|ref|YP_003704681.1| (p)ppGpp synthetase I SpoT/RelA [Truepera radiovictrix DSM 17093]
 gi|297164427|gb|ADI14138.1| (p)ppGpp synthetase I, SpoT/RelA [Truepera radiovictrix DSM 17093]
          Length = 729

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 214/504 (42%), Positives = 302/504 (59%), Gaps = 49/504 (9%)

Query: 125 DSPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
           D+P+ L +      SYLS      +  A  LA  AH G  RRSGEP+I HPV V  +L E
Sbjct: 2   DAPQSLLD----KTSYLSDAARARLCEAYALAEAAHRGVTRRSGEPYITHPVAVTELLAE 57

Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
           + LD +++ AGLLHDTVEDT+V TFE IE  FGA VRRIVEGETK+SKL   K +     
Sbjct: 58  MHLDVDALIAGLLHDTVEDTDV-TFEEIEARFGAPVRRIVEGETKISKL---KIRQLEAG 113

Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
            ++ +A++LRQM LAM  +VR+I+VKLADRLHNMRTL HMPP KQ  IA ETL++FAPLA
Sbjct: 114 AEEEQAENLRQMLLAMVGDVRIILVKLADRLHNMRTLRHMPPEKQRRIARETLEIFAPLA 173

Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
             LG+  IKSELE L F Y   E Y  ++R+V     E E  ++ +  +L +++  +   
Sbjct: 174 HRLGINHIKSELEELGFFYLEPERYRALQRQVRMRRAEREAYVQRSIALLEERLAQE--- 230

Query: 365 DLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQ- 423
               +  EI    K  YS+Y+ + +   +++++  +  +R I+ P   +G G     ++ 
Sbjct: 231 ---GLTFEISGRSKGLYSVYRKMQRDAKNLDQIFDLMAIRAILTP---TGGGESVEDEEK 284

Query: 424 -ICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEM 482
            ICY  LG++H IWTPIP   KDY+A PKPNGYQSLHTT+I    +    +EVQIRT  M
Sbjct: 285 AICYRALGIIHSIWTPIPGRFKDYVAVPKPNGYQSLHTTVIGLQGQP---IEVQIRTRRM 341

Query: 483 DLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEE 542
             IAE G+AAH++ +       G   P              + +  R++W+  + +    
Sbjct: 342 HEIAEYGVAAHWAYK------QGFGDP--------------SQLQARLTWMKQLLD---- 377

Query: 543 FVGNM--TSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVA 600
            V N   ++  F+DT+  D L  RV VFTP G++ NLP G+T +D+AY +HTE+G++ + 
Sbjct: 378 -VNNTAESAGAFIDTVKSDFLSERVLVFTPAGDVVNLPLGSTPIDFAYHVHTEVGHRCIG 436

Query: 601 AKVNGNLVSPTHVLANAEVVEIIT 624
           A+VNG +V  ++ L   + VEI+T
Sbjct: 437 ARVNGEIVPLSYALQTGDRVEILT 460


>gi|338534399|ref|YP_004667733.1| GTP pyrophosphokinase [Myxococcus fulvus HW-1]
 gi|337260495|gb|AEI66655.1| GTP pyrophosphokinase [Myxococcus fulvus HW-1]
          Length = 740

 Score =  371 bits (952), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 205/497 (41%), Positives = 303/497 (60%), Gaps = 51/497 (10%)

Query: 129 RLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
           RL + L+    Y    +L+++++A + + + H GQ R+SGEP+++HP+EVA ILGEL+LD
Sbjct: 3   RLNDILQRVSQYHPDPDLDIIKKAYVYSAKVHQGQLRKSGEPYLVHPLEVAGILGELKLD 62

Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
             SI  GLLHDT+EDT + T E + E FG+ V  +V+G TK+SK       + + S ++ 
Sbjct: 63  EASIVTGLLHDTIEDT-LATAEELTELFGSEVAHLVDGVTKLSKF----SASASLSQEEK 117

Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
           +A++ R+M +AM +++RVI+VKLADR HNMRTL HM   KQ+ IA ETL ++APLA  LG
Sbjct: 118 QAENFRKMIIAMAQDIRVILVKLADRTHNMRTLDHMSEEKQARIAQETLDIYAPLANRLG 177

Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
           +  IK+ELE+LSF Y   +++  ++ ++    KE EK +E+   ++  K+ +        
Sbjct: 178 ISWIKTELEDLSFRYVKPQEFFALQEKLNKRKKEREKYIEDTCDVIRSKLAE------RG 231

Query: 369 VKTEIRSVCKEPYSIYKAVLKSRG-SINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYH 427
           +K E+    K  YSIYK + KS+G   ++++ I   RII    P             CY 
Sbjct: 232 LKGEVSGRFKHVYSIYKKI-KSQGIDFDQIHDIIAFRIIAPTAPS------------CYE 278

Query: 428 VLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAE 487
            LGLVH +W P+P   KD+IA PKPN YQSLHTT+I  L E   R+EVQIRT EM  IAE
Sbjct: 279 ALGLVHEMWKPVPGRFKDFIAIPKPNMYQSLHTTIIGPLSE---RVEVQIRTAEMHKIAE 335

Query: 488 RGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNM 547
            GIAAH+                 +   GK V   +     + +WL  + EWQ++     
Sbjct: 336 EGIAAHW-----------------KYKEGKAVISKDDE---KFAWLRQLMEWQQDL---K 372

Query: 548 TSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNL 607
             +EF++T+  DL    VFVFTP+G++++LP+GAT VD+AY IH+++GN+ V AKVNG +
Sbjct: 373 DPKEFLETVKVDLFTDEVFVFTPKGDVRSLPRGATPVDFAYAIHSDVGNRCVGAKVNGKI 432

Query: 608 VSPTHVLANAEVVEIIT 624
           V   + + N + VE++T
Sbjct: 433 VPLRYKMKNGDTVEVLT 449


>gi|108762300|ref|YP_631405.1| GTP pyrophosphokinase [Myxococcus xanthus DK 1622]
 gi|108466180|gb|ABF91365.1| GTP pyrophosphokinase [Myxococcus xanthus DK 1622]
          Length = 753

 Score =  369 bits (948), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 204/494 (41%), Positives = 303/494 (61%), Gaps = 52/494 (10%)

Query: 133 DLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
           D+   +S   P+ +L+++++A + + + H GQ R+SGEP+++HP+EVA ILGEL+LD  S
Sbjct: 20  DILQRVSQYHPDPDLDIIKKAYVYSAKVHQGQLRKSGEPYLVHPLEVAGILGELKLDEAS 79

Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
           I  GLLHDT+EDT + T E + E FG+ V  +V+G TK+SK       + + S ++ +A+
Sbjct: 80  IVTGLLHDTIEDT-LATEEELTELFGSEVAHLVDGVTKLSKF----SASASLSQEEKQAE 134

Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
           + R+M +AM +++RVI+VKLADR HNMRTL HM   KQ+ IA ETL ++APLA  LG+  
Sbjct: 135 NFRKMIIAMAQDIRVILVKLADRTHNMRTLDHMSEEKQARIAQETLDIYAPLANRLGISW 194

Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
           IK+ELE+LSF Y   +++  ++ ++    KE EK +E+   ++  K+ +        +K 
Sbjct: 195 IKTELEDLSFRYVKPQEFFALQAKLNKRKKEREKYIEDTCDLIRSKLAE------RGLKG 248

Query: 372 EIRSVCKEPYSIYKAVLKSRG-SINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLG 430
           E+    K  YSIYK + KS+G   ++++ I   RII    P             CY  LG
Sbjct: 249 EVSGRFKHVYSIYKKI-KSQGIDFDQIHDIIAFRIIAPTAPS------------CYEALG 295

Query: 431 LVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGI 490
           LVH +W P+P   KD+IA PKPN YQSLHTT+I  L E   R+EVQIRT EM  IAE GI
Sbjct: 296 LVHEMWKPVPGRFKDFIAIPKPNMYQSLHTTIIGPLSE---RVEVQIRTSEMHKIAEEGI 352

Query: 491 AAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSR 550
           AAH+                 +   GK V   +     + +WL  + EWQ++       +
Sbjct: 353 AAHW-----------------KYKEGKAVISKDDE---KFAWLRQLMEWQQDL---KDPK 389

Query: 551 EFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSP 610
           EF++T+  DL    VFVFTP+G++++LP+GAT VD+AY IH+++GN+ V AKVNG +V  
Sbjct: 390 EFLETVKVDLFTDEVFVFTPKGDVRSLPRGATPVDFAYAIHSDVGNRCVGAKVNGKIVPL 449

Query: 611 THVLANAEVVEIIT 624
            + + N + VE++T
Sbjct: 450 RYKMKNGDTVEVLT 463


>gi|433444159|ref|ZP_20409169.1| GTP pyrophosphokinase [Anoxybacillus flavithermus TNO-09.006]
 gi|432001807|gb|ELK22676.1| GTP pyrophosphokinase [Anoxybacillus flavithermus TNO-09.006]
          Length = 732

 Score =  369 bits (946), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 211/491 (42%), Positives = 298/491 (60%), Gaps = 51/491 (10%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           YLS ++++ + RA   A EAH  Q R+SGEP+IIHP++VA IL +LE+D  +IAAG LHD
Sbjct: 19  YLSKDDVQFIERAYEFAKEAHREQYRKSGEPYIIHPIQVAGILVDLEMDPATIAAGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            VEDT+V T E +E EFG  V  +V+G   V+KLGK+K K    S ++ +A++ R+MFLA
Sbjct: 79  VVEDTHV-TKEDLEREFGKEVAMLVDG---VTKLGKIKYK----SHEEQQAENHRKMFLA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M +++RVI++KLADRLHNMRTL H+P  KQ  IA ETL++FAPLA  LG+ +IK ELE+ 
Sbjct: 131 MAQDIRVILIKLADRLHNMRTLKHLPIEKQRRIANETLEIFAPLAHRLGISKIKWELEDT 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           +  Y N + Y ++   +     E E+ LEE  + +  ++++      + ++ EI    K 
Sbjct: 191 ALRYLNPQQYYRIVNLMKKKRAEREQYLEEVIQEMRARLQE------VGIQAEISGRPKH 244

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIY+ ++      NE+  +  +RII++              + CY VLG++H  W P+
Sbjct: 245 IYSIYRKMVLQNKQFNEIYDLLAVRIIVESI------------KDCYAVLGIIHTCWKPM 292

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PKPN YQSLHTT++    E    LEVQIRT EM  IAE GIAAH++ +  
Sbjct: 293 PGRFKDYIAMPKPNMYQSLHTTVVGPKGEP---LEVQIRTFEMHHIAEFGIAAHWAYK-- 347

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
                           GKT+  N      +++W   I EWQ E      + EFV+T+  D
Sbjct: 348 ---------------EGKTIRPN--TFEEKLAWFREIVEWQNE---TNNAEEFVETLKMD 387

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           L    VFVFTP+G++  LP G+  +D+AY IH+EIGNK + AKVNG +V   H L   ++
Sbjct: 388 LFSDMVFVFTPKGDVIELPAGSVPIDFAYRIHSEIGNKTIGAKVNGKMVPLDHPLQTGDI 447

Query: 620 VEIITYNVSFS 630
           VEI+T N S+ 
Sbjct: 448 VEILTSNHSYG 458


>gi|386856222|ref|YP_006260399.1| ppGpp synthetase I, SpoT/RelA [Deinococcus gobiensis I-0]
 gi|379999751|gb|AFD24941.1| ppGpp synthetase I, SpoT/RelA [Deinococcus gobiensis I-0]
          Length = 753

 Score =  368 bits (945), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 212/489 (43%), Positives = 294/489 (60%), Gaps = 42/489 (8%)

Query: 149 VRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVT 208
           +  A   A +AH G  R+SGEP+I HPV VA IL +L +D +S+ AGLLHDTVED   VT
Sbjct: 19  IEEAFEFARDAHAGVNRKSGEPYITHPVAVAVILAKLGMDSDSLMAGLLHDTVEDVEGVT 78

Query: 209 FERIEEEFGATVRRIVEGETKVSKLGKL--KCKNENHSVQDVKADDLRQMFLAMTEEVRV 266
           F  IE  FGA VRRIVEGETKVSKL K   +    + + +DV+A++LRQM +AMT ++R+
Sbjct: 79  FAGIEALFGADVRRIVEGETKVSKLSKQGSQAAQVSDTGRDVQAENLRQMLVAMTADIRI 138

Query: 267 IIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNA 326
           I+VKLADRLHNMRTL  M P KQ+ IA ET+++FAPLA  LG+ QIK ELE+LSF Y N 
Sbjct: 139 IVVKLADRLHNMRTLGSMKPEKQARIARETMEIFAPLAHRLGIGQIKWELEDLSFRYLNP 198

Query: 327 EDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKA 386
           + Y  +  R+    +E E  + EA   L + ++DD  L       +I    K  +SI+  
Sbjct: 199 DAYEYLSTRLRTRQEEREALIAEAVAQLREGLDDDLELHEWVSGIDIAGRSKHLWSIHNK 258

Query: 387 VLKSRGSINEVNQIAQLRIIIKPKPCSGVGP-----------LCSPQQICYHVLGLVHGI 435
           + K    + ++  +  +R+I++P+    V P               ++ICYH + +VH +
Sbjct: 259 MQKEGKGLEQIFDLLAIRVILRPRDLV-VPPGTDEKRRERAEETREKRICYHTVSVVHSM 317

Query: 436 WTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYS 495
           WTP+P   KDYIA PKPNGYQSLHTT+I    +S   +EVQIR+  M  +AE G+AAH+ 
Sbjct: 318 WTPLPGRFKDYIAVPKPNGYQSLHTTVIS---QSGQPIEVQIRSLRMHEVAEYGVAAHW- 373

Query: 496 GRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDT 555
             ++  G  G A+ +                  R SWL  +RE Q E      + +++D 
Sbjct: 374 --MYKQG-AGLAQKD------------------RESWLAQLRELQNEI---NDASDYLDA 409

Query: 556 ITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLA 615
           +  D+L  RV VFTP+G   +LP G+T VD+AY IH+ IG   V A+VNG++V   H L 
Sbjct: 410 VKTDILSQRVRVFTPKGLAVSLPAGSTPVDFAYHIHSRIGETTVGARVNGSIVPLAHHLG 469

Query: 616 NAEVVEIIT 624
           N ++VEI+T
Sbjct: 470 NGDMVEIVT 478


>gi|212638570|ref|YP_002315090.1| GTP pyrophosphokinase [Anoxybacillus flavithermus WK1]
 gi|212560050|gb|ACJ33105.1| GTP pyrophosphokinase (ppGpp synthetase) [Anoxybacillus
           flavithermus WK1]
          Length = 732

 Score =  368 bits (945), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 212/491 (43%), Positives = 297/491 (60%), Gaps = 51/491 (10%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           YLS ++++ + RA   A EAH  Q R+SGEP+IIHP++VA IL +LE+D  +IAAG LHD
Sbjct: 19  YLSKDDVQFIERAYEFAKEAHREQYRKSGEPYIIHPIQVAGILVDLEMDPATIAAGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            VEDT+V T E +E EFG  V  +V+G   V+KLGK+K K    S ++ +A++ R+MFLA
Sbjct: 79  VVEDTHV-TKEDLEREFGKEVAMLVDG---VTKLGKIKYK----SHEEQQAENHRKMFLA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M +++RVI++KLADRLHNMRTL H+P  KQ  IA ETL++FAPLA  LG+ +IK ELE+ 
Sbjct: 131 MAQDIRVILIKLADRLHNMRTLKHLPIEKQRRIANETLEIFAPLAHRLGISKIKWELEDT 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           +  Y N + Y ++   +     E E+ LEE  + +  ++ +      + ++ EI    K 
Sbjct: 191 ALRYLNPQQYYRIVNLMKKKRAEREQYLEEVIQEMRARLLE------VGIQAEISGRPKH 244

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIY+ ++      NE+  +  +RII++              + CY VLG++H  W P+
Sbjct: 245 IYSIYRKMVLQNKQFNEIYDLLAVRIIVESI------------KDCYAVLGIIHTCWKPM 292

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PKPN YQSLHTT++    E    LEVQIRT EM  IAE GIAAH++ +  
Sbjct: 293 PGRFKDYIAMPKPNMYQSLHTTVVGPKGEP---LEVQIRTFEMHHIAEFGIAAHWAYK-- 347

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
                           GKT+  N      ++SW   I EWQ E      + EFV+T+  D
Sbjct: 348 ---------------EGKTIRPN--TFEEKLSWFREIVEWQNE---TNNAEEFVETLKMD 387

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           L    VFVFTP+G++  LP G+  +D+AY IH+EIGNK + AKVNG +V   H L   ++
Sbjct: 388 LFSDMVFVFTPKGDVIELPAGSVPIDFAYRIHSEIGNKTIGAKVNGKMVPLDHPLQTGDI 447

Query: 620 VEIITYNVSFS 630
           VEI+T N S+ 
Sbjct: 448 VEILTSNHSYG 458


>gi|442321697|ref|YP_007361718.1| GTP pyrophosphokinase [Myxococcus stipitatus DSM 14675]
 gi|441489339|gb|AGC46034.1| GTP pyrophosphokinase [Myxococcus stipitatus DSM 14675]
          Length = 737

 Score =  368 bits (944), Expect = 7e-99,   Method: Compositional matrix adjust.
 Identities = 202/496 (40%), Positives = 300/496 (60%), Gaps = 49/496 (9%)

Query: 129 RLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
           RL + L+   SY    +L+++++A + + + H GQ R+SGEP+++HP+EVA IL +L+LD
Sbjct: 3   RLNDILQRVSSYHPDPDLDIIKKAYVYSAKVHQGQLRKSGEPYLVHPLEVAGILADLKLD 62

Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
             SI  GLLHDT+EDT + T E + E FG+ V ++V+G TK+SK       + + S ++ 
Sbjct: 63  EASIVTGLLHDTIEDT-LATAEELTELFGSEVAQLVDGVTKLSKF----SASASLSQEEK 117

Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
           +A++ R+M +AM +++RVI+VKLADR HNMRTL HM   KQ+ IA ETL ++APLA  LG
Sbjct: 118 QAENFRKMIIAMAQDIRVILVKLADRTHNMRTLDHMNEEKQARIAQETLDIYAPLANRLG 177

Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
           +  IK+ELE+LSF Y   +++  ++ ++    KE EK +E+   ++  K+ +        
Sbjct: 178 ISWIKTELEDLSFRYVKPQEFFGLQEKLNKRKKEREKYIEDTCDLIRSKLAE------RG 231

Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
           +K E+    K  YSIYK +       ++++ I   RII    P             CY  
Sbjct: 232 LKGEVSGRFKHVYSIYKKIKAQGIDFDQIHDIIAFRIIAPAAPA------------CYEA 279

Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAER 488
           LGLVH +W P+P   KD+IA PKPN YQSLHTT+I  L E   R+EVQIRT EM  IAE 
Sbjct: 280 LGLVHEMWKPVPGRFKDFIAIPKPNMYQSLHTTVIGPLSE---RVEVQIRTAEMHKIAEE 336

Query: 489 GIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMT 548
           GIAAH+                 +   GK V   +     + +WL  + EWQ++      
Sbjct: 337 GIAAHW-----------------KYKEGKAVISKDDE---KFAWLRQLMEWQQDL---KD 373

Query: 549 SREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLV 608
            +EF++T+  DL    VFVFTP+G++++LP+GAT VD+AY IH+++GN+ V AKVNG +V
Sbjct: 374 PKEFLETVKVDLFTDEVFVFTPKGDVRSLPRGATPVDFAYAIHSDVGNRCVGAKVNGKIV 433

Query: 609 SPTHVLANAEVVEIIT 624
              + L N + VE++T
Sbjct: 434 PLRYKLKNGDTVEVLT 449


>gi|115374167|ref|ZP_01461454.1| RelA/SpoT family protein [Stigmatella aurantiaca DW4/3-1]
 gi|310820896|ref|YP_003953254.1| GTP pyrophosphokinase [Stigmatella aurantiaca DW4/3-1]
 gi|115368834|gb|EAU67782.1| RelA/SpoT family protein [Stigmatella aurantiaca DW4/3-1]
 gi|309393968|gb|ADO71427.1| GTP pyrophosphokinase [Stigmatella aurantiaca DW4/3-1]
          Length = 734

 Score =  367 bits (943), Expect = 8e-99,   Method: Compositional matrix adjust.
 Identities = 199/496 (40%), Positives = 302/496 (60%), Gaps = 49/496 (9%)

Query: 129 RLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
           RL + L+   SY    +L+++++A + + + H GQ R+SGEP+++HP+EVA IL EL+LD
Sbjct: 3   RLNDILQRVASYHPDPDLDIIKKAYVYSAKVHQGQLRKSGEPYLVHPLEVAGILAELKLD 62

Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
             SI  GLLHDT+EDT + T E + E FG  V ++V+G TK+SK       +   S ++ 
Sbjct: 63  EASIVTGLLHDTIEDT-LATAEELTELFGPEVSQLVDGVTKLSKF----SASATLSQEEK 117

Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
           +A++ R+M +AM +++RVI+VKLADR HNMRTL HM   KQ+ IA ETL ++APLA  LG
Sbjct: 118 QAENFRKMIIAMAQDIRVILVKLADRTHNMRTLDHMSEEKQARIAQETLDIYAPLANRLG 177

Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
           +  IK+ELE+LSF Y   +DY  +  ++    KE EK +E+ + ++  K+E+        
Sbjct: 178 ISWIKTELEDLSFRYVKPQDYFSLLEKLNRRKKEREKYIEDTSTLVRSKLEE------RN 231

Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
           ++ E+    K  YSIYK +       ++++ I   R+++   P             CY  
Sbjct: 232 LEGEVSGRFKHVYSIYKKIKAQGIEFDQIHDIIAFRLLMPTVPS------------CYEA 279

Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAER 488
           LGLVH +W P+P   KD+IA PKPN YQSLHTT+I  L E   R+EVQIRT +M+ +AE 
Sbjct: 280 LGLVHQLWKPVPGRFKDFIAIPKPNMYQSLHTTVIGPLSE---RVEVQIRTPDMNKVAEE 336

Query: 489 GIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMT 548
           GIAAH++ +                  GK +   +     + +WL  + EWQ++      
Sbjct: 337 GIAAHWAYK-----------------EGKALISKDDE---KFAWLRQLMEWQQDL---KD 373

Query: 549 SREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLV 608
            +EF++T+  DL    VFVFTP+G++K+LP+GAT VD+AY IH+++G + V AKVNG +V
Sbjct: 374 PKEFLETVKVDLFTDEVFVFTPKGDVKSLPRGATPVDFAYAIHSDVGGRCVGAKVNGKIV 433

Query: 609 SPTHVLANAEVVEIIT 624
              + + N ++VE++T
Sbjct: 434 PLRYKMKNGDMVEVLT 449


>gi|148265188|ref|YP_001231894.1| (p)ppGpp synthetase I SpoT/RelA [Geobacter uraniireducens Rf4]
 gi|146398688|gb|ABQ27321.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacter uraniireducens Rf4]
          Length = 716

 Score =  367 bits (941), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 208/496 (41%), Positives = 297/496 (59%), Gaps = 52/496 (10%)

Query: 129 RLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
           RL + L    SY    +L+LVR+A +   + H GQ R SGEP+++HP+EVA IL +L+LD
Sbjct: 3   RLNDILDKVASYNPACDLDLVRKAYVFCAKVHQGQTRLSGEPYLVHPMEVAGILADLKLD 62

Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
             ++  GLLHDTVEDT + T E +E  FGA V R+V+G   V+K+GK+  K +  S    
Sbjct: 63  VPTVVTGLLHDTVEDT-LTTLEELEGMFGAEVARLVDG---VTKIGKIHFKTKEES---- 114

Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
           +A++ R+M LAM  ++RVI+VKLADRLHNMRTL + P  KQ SIA ETL ++AP+A  LG
Sbjct: 115 QAENFRKMLLAMANDIRVILVKLADRLHNMRTLQYQPEPKQRSIAKETLDIYAPIANRLG 174

Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
           +  +KSELE+LSF Y + + Y  +  +V    KE E  ++E  +I+ +K+ D        
Sbjct: 175 ISWVKSELEDLSFRYLDPQIYYDLASKVTKKKKERESYVDEVMQIIKEKLAD------HG 228

Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
           +  E+    K  YSIY+ +      I+E+  +  +R++++              + CY V
Sbjct: 229 ITGEVSGRSKHLYSIYRKMQSRSVDIDEIYDLVAIRVMVE------------DIRECYEV 276

Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAER 488
           LG++H  W PIP   KDYIA PK N YQSLHTT+I    E   R+EVQIRT EM  +AE 
Sbjct: 277 LGIIHSTWKPIPGRFKDYIAMPKGNMYQSLHTTVIGPYGE---RMEVQIRTGEMHRVAEA 333

Query: 489 GIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMT 548
           GIAAH+  +             G+    K V         R +WL  + EWQ+E      
Sbjct: 334 GIAAHWKYK------------EGKGYDEKEV--------KRFTWLRQLLEWQQEL---DD 370

Query: 549 SREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLV 608
           SREF+DT+  +L    V+VFTP+G++K  PKG+T +D+AY +HT++G++ V AKVNG LV
Sbjct: 371 SREFMDTVKVELFPEEVYVFTPKGDVKGYPKGSTPIDFAYSVHTDVGHRCVGAKVNGKLV 430

Query: 609 SPTHVLANAEVVEIIT 624
              + L N ++VE+IT
Sbjct: 431 PLKYELKNGDIVEVIT 446


>gi|15806838|ref|NP_295561.1| GTP pyrophosphokinase [Deinococcus radiodurans R1]
 gi|6459617|gb|AAF11392.1|AE002024_3 GTP pyrophosphokinase [Deinococcus radiodurans R1]
          Length = 787

 Score =  367 bits (941), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 215/506 (42%), Positives = 305/506 (60%), Gaps = 44/506 (8%)

Query: 133 DLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESI 192
           +LR  I+     E E V  A + A +AH G  R+SGEP+I HPV VA IL  L +D +S+
Sbjct: 40  ELRALIASRPEAERERVEAAYVFARDAHAGVMRKSGEPYITHPVAVAIILARLGMDTDSL 99

Query: 193 AAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSV----QDV 248
            AGLLHDTVED   VTFE IE  FG  VRRIVEGETKVSKL K    N+   V    +D+
Sbjct: 100 MAGLLHDTVEDVEGVTFEVIERNFGPDVRRIVEGETKVSKLSK--QGNQQAEVPGDGRDM 157

Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
           +A++LRQM +AMT ++R+I+VKLADRLHNMRTL  M P KQ  IA ET+++FAPLA  LG
Sbjct: 158 QAENLRQMLIAMTVDLRIIVVKLADRLHNMRTLGSMKPEKQQRIARETMEIFAPLAHRLG 217

Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
           + +IK ELE+LSF Y + + Y  ++ R+    +E ++ +  A   L   +EDD  L    
Sbjct: 218 IGRIKWELEDLSFRYLHPDAYEYLQTRLRTRQEERDELIVNAVAELQDALEDDLELLEWV 277

Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCS---GV-------GPL 418
              +I    K  +SI+  + K   ++ ++  +  LR+I+KP+P +   GV          
Sbjct: 278 EDIDIAGRSKHLWSIHNKMQKEGKALEQIFDLLALRVILKPRPLTVPEGVEESRRERAEE 337

Query: 419 CSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIR 478
              +++CYH L +VH +WTP+P  +KDYIA PKPNGYQSLHTT+I     S   +EVQIR
Sbjct: 338 NREKRVCYHTLSVVHSMWTPLPGRVKDYIAVPKPNGYQSLHTTVI---SRSGQPIEVQIR 394

Query: 479 TEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIRE 538
           +  M  +AE G+AAH+   ++  G             G+    +  N      W+  +RE
Sbjct: 395 SLRMHEVAEYGVAAHW---MYKQG-------------GQLAQKDREN------WITQLRE 432

Query: 539 WQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKM 598
            Q E +G+ +  +++D +  D+L  RV+VFTP+G   +L  G+T +D+AY IHT IG   
Sbjct: 433 IQNE-IGDAS--DYIDAVKNDILSQRVWVFTPKGLAVSLTAGSTPIDFAYHIHTRIGETA 489

Query: 599 VAAKVNGNLVSPTHVLANAEVVEIIT 624
           V A+VNG++V  +H L N ++VE++T
Sbjct: 490 VGARVNGSIVPLSHRLQNGDMVEVLT 515


>gi|444919613|ref|ZP_21239613.1| GTP pyrophosphokinase [Cystobacter fuscus DSM 2262]
 gi|444708165|gb|ELW49258.1| GTP pyrophosphokinase [Cystobacter fuscus DSM 2262]
          Length = 740

 Score =  366 bits (939), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 200/497 (40%), Positives = 303/497 (60%), Gaps = 50/497 (10%)

Query: 129 RLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
           RL + L+   SY    +L+++++A + + + H GQ R+SGEP++IHP+EVA +L EL+LD
Sbjct: 3   RLNDILQRVASYHPDPDLDIIKKAYVYSAKVHQGQLRKSGEPYLIHPLEVAGLLAELKLD 62

Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
             SI  GLLHDT+EDT + T E + E FG  V ++V+G TK+SK       +   S ++ 
Sbjct: 63  EASIVTGLLHDTIEDT-LATAEELTELFGPEVAQLVDGVTKLSKF----SASATLSQEEK 117

Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
           +A++ R+M +AM +++RVI+VKLADR HNMRTL HM   KQ  IA ETL ++APLA  LG
Sbjct: 118 QAENFRKMIIAMAQDIRVILVKLADRTHNMRTLDHMSEEKQRRIAQETLDIYAPLANRLG 177

Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
           +  +K+ELE+LSF Y   ++Y  ++ ++    KE EK +++ + ++  K+ +        
Sbjct: 178 ISWVKTELEDLSFRYLKPQEYLALQDKIGRRKKEREKYIDDVSTLITTKLTE------RG 231

Query: 369 VKTEIRSVCKEPYSIYKAVLKSRG-SINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYH 427
           +K E+    K  YSIYK  +KS+G    +++ +   RII    P             CY 
Sbjct: 232 LKGEVSGRFKHVYSIYKK-MKSQGIEFEQIHDVIAFRIITNSMPA------------CYE 278

Query: 428 VLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAE 487
            LGLVH +W P+P   KD+IA PKPN YQSLHTT++  L E   R+EVQIRT +M  +AE
Sbjct: 279 ALGLVHQLWKPVPGRFKDFIAIPKPNMYQSLHTTVVGPLGE---RIEVQIRTPDMHKVAE 335

Query: 488 RGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNM 547
            GIAAH++ +                  GK + ++  +   + +WL  + EWQ++     
Sbjct: 336 EGIAAHWAYK-----------------EGKALSVSKDD--EKFAWLRQLMEWQQDL---K 373

Query: 548 TSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNL 607
             +EF++T+  DL    VFVFTPRG++K+LP+GAT VD+AY IH+++G + V +KVNG +
Sbjct: 374 DPKEFLETVKVDLFTDEVFVFTPRGDVKSLPRGATPVDFAYAIHSDVGGRCVGSKVNGKI 433

Query: 608 VSPTHVLANAEVVEIIT 624
           V   + L N + VE++T
Sbjct: 434 VPLRYKLKNGDTVEVLT 450


>gi|255994169|ref|ZP_05427304.1| GTP diphosphokinase [Eubacterium saphenum ATCC 49989]
 gi|255993837|gb|EEU03926.1| GTP diphosphokinase [Eubacterium saphenum ATCC 49989]
          Length = 733

 Score =  365 bits (936), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 210/502 (41%), Positives = 316/502 (62%), Gaps = 56/502 (11%)

Query: 124 EDSPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILG 183
           ED+  +  ++++   SY    +LE +  A  +A++ H+GQKR+SGEP+IIHP  VA+IL 
Sbjct: 2   EDAKTKFLKEIKAIKSY----DLEKLGEAYDVAYKQHNGQKRKSGEPYIIHPEAVAKILA 57

Query: 184 ELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENH 243
           EL +D +++ AGLLHD +EDT+  T E +EE+FG+ VR +VEG   V+KLG L  + +  
Sbjct: 58  ELGMDEDTLIAGLLHDVIEDTDF-TPEMVEEKFGSDVRHLVEG---VTKLGTLVFETK-- 111

Query: 244 SVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPL 303
             ++V+A+++R+MFLAM++++RV+I+KLADRLHN+RT+++M   K      ETL ++APL
Sbjct: 112 --EEVQAENMRKMFLAMSKDIRVLIIKLADRLHNLRTINYMSQDKIKLKCQETLDIYAPL 169

Query: 304 AKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQF 363
           A  LG+Y IK ELE+++    + E Y ++K+ V     E + E E+A K ++ ++E  + 
Sbjct: 170 ASRLGIYSIKFELEDIALKCLHPETYEELKKNV----NEKKTEREKAIKDVISEVE--RA 223

Query: 364 LDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQ 423
           L  + ++  I    K  YSIYK +   + S++E+  +  +RII+  K             
Sbjct: 224 LKPLGIEYTIYGRSKHFYSIYKKMQHQKKSLDEIFDLTAIRIIVNEKSD----------- 272

Query: 424 ICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFR-LEVQIRTEEM 482
            CY VLG+VH IWTPIP   KDYIA PK N YQS+HTT+I     S+ R  EVQIRT++M
Sbjct: 273 -CYAVLGVVHNIWTPIPGRFKDYIAMPKMNMYQSIHTTVIG----SIGRPFEVQIRTKKM 327

Query: 483 DLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEE 542
             +AE GIAAH+                 +   GK+     A+  ++++WL    EWQ++
Sbjct: 328 HELAEYGIAAHW-----------------KYKEGKSSASEEAD-DIKLAWLRQTLEWQKD 369

Query: 543 FVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAK 602
            V    S+EF+DT+  DL   +VFVFTP+G++  LP GAT +D+A+ IHT+IG K V AK
Sbjct: 370 VV---DSKEFMDTLKIDLFTRQVFVFTPKGDVIELPAGATPLDFAFKIHTQIGCKCVGAK 426

Query: 603 VNGNLVSPTHVLANAEVVEIIT 624
           VNG +V+  HVL N ++V+IIT
Sbjct: 427 VNGKMVTIDHVLNNGDIVDIIT 448


>gi|110798612|ref|YP_696617.1| GTP pyrophosphokinase [Clostridium perfringens ATCC 13124]
 gi|110673259|gb|ABG82246.1| GTP pyrophosphokinase [Clostridium perfringens ATCC 13124]
          Length = 726

 Score =  363 bits (932), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 215/500 (43%), Positives = 298/500 (59%), Gaps = 54/500 (10%)

Query: 134 LRPTISYLSPN----ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDW 189
           L   IS +  N    +++LV++A  LAFEAH  QKR SGEP+IIHP+ VA IL ++ +D 
Sbjct: 2   LEELISKIKANGNNVDIDLVKKAYDLAFEAHKEQKRESGEPYIIHPISVAMILADMGMDT 61

Query: 190 ESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVK 249
            +I AGLLHD +EDT+  T+E I   F   V  +V+G   V+KLGK+K K    S ++ +
Sbjct: 62  NTIVAGLLHDVIEDTDY-TYEDISNIFNVEVANLVDG---VTKLGKIKYK----SKEEQQ 113

Query: 250 ADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGM 309
           AD++R+M LAM +++RVII+KLADRLHNMRTL +M P KQ   A ETL +FAPLA  LG+
Sbjct: 114 ADNVRKMLLAMAKDIRVIIIKLADRLHNMRTLKYMKPEKQKKKAQETLDIFAPLAHRLGI 173

Query: 310 YQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIED-DQFLDLMT 368
            +IK ELE+L   Y + E+Y  +   +A+   E E       K + + IE+  + LD   
Sbjct: 174 SKIKWELEDLCLRYIHPEEYYDLVNMIAEKRVERE-------KFISRIIEELKENLDKAN 226

Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
           + ++I    K  YSIY+ ++    SI ++  +  +RI            L +  + CY V
Sbjct: 227 IDSDIEGRPKHFYSIYRKMVNKHKSIEQIFDLTAIRI------------LVNTVKDCYAV 274

Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAER 488
           LG+VH I+ PIP   KDYIA PKPN YQSLHTT+I    ++    E+QIRT EM   AE 
Sbjct: 275 LGIVHTIYKPIPGRFKDYIAMPKPNMYQSLHTTVIGSEGKT---FEIQIRTFEMHRTAEY 331

Query: 489 GIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMT 548
           GIAAH+  +  VTG              K +   N     +++WL  I EWQ+E V    
Sbjct: 332 GIAAHWKYKSGVTG-----------TDSKDMTFEN-----KLTWLRDILEWQKEAV---D 372

Query: 549 SREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLV 608
           + EF++    DL    +FVFTP+G + NLP GAT +D+AY IHT+IGNK V AKVNG +V
Sbjct: 373 ATEFMEGFKLDLFSDEIFVFTPKGVVINLPAGATPIDFAYKIHTDIGNKCVGAKVNGKIV 432

Query: 609 SPTHVLANAEVVEIITYNVS 628
           +  + L   E+VEI+T + S
Sbjct: 433 TLDYKLKTGEIVEILTSSSS 452


>gi|168208638|ref|ZP_02634263.1| GTP pyrophosphokinase [Clostridium perfringens B str. ATCC 3626]
 gi|170712986|gb|EDT25168.1| GTP pyrophosphokinase [Clostridium perfringens B str. ATCC 3626]
          Length = 726

 Score =  363 bits (932), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 215/500 (43%), Positives = 298/500 (59%), Gaps = 54/500 (10%)

Query: 134 LRPTISYLSPN----ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDW 189
           L   IS +  N    +++LV++A  LAFEAH  QKR SGEP+IIHP+ VA IL ++ +D 
Sbjct: 2   LEELISKIKANGNNVDIDLVKKAYDLAFEAHKEQKRESGEPYIIHPISVAMILADMGMDT 61

Query: 190 ESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVK 249
            +I AGLLHD +EDT+  T+E I   F   V  +V+G   V+KLGK+K K    S ++ +
Sbjct: 62  NTIVAGLLHDVIEDTDY-TYEDISNIFNVEVANLVDG---VTKLGKIKYK----SKEEQQ 113

Query: 250 ADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGM 309
           AD++R+M LAM +++RVII+KLADRLHNMRTL +M P KQ   A ETL +FAPLA  LG+
Sbjct: 114 ADNVRKMLLAMAKDIRVIIIKLADRLHNMRTLKYMKPEKQKKKAQETLDIFAPLAHRLGI 173

Query: 310 YQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIED-DQFLDLMT 368
            +IK ELE+L   Y + E+Y  +   +A+   E E       K + + IE+  + LD   
Sbjct: 174 SKIKWELEDLCLRYIHPEEYYDLVNMIAEKRVERE-------KFISRIIEELKENLDKAN 226

Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
           + ++I    K  YSIY+ ++    SI ++  +  +RI            L +  + CY V
Sbjct: 227 IDSDIEGRPKHFYSIYRKMVNKHKSIEQIFDLTAIRI------------LVNTVKDCYAV 274

Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAER 488
           LG+VH I+ PIP   KDYIA PKPN YQSLHTT+I    ++    E+QIRT EM   AE 
Sbjct: 275 LGIVHTIYKPIPGRFKDYIAMPKPNMYQSLHTTVIGSEGKT---FEIQIRTFEMHRTAEY 331

Query: 489 GIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMT 548
           GIAAH+  +  VTG              K +   N     +++WL  I EWQ+E V    
Sbjct: 332 GIAAHWKYKSGVTG-----------TDSKDMTFEN-----KLTWLRDILEWQKEAV---D 372

Query: 549 SREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLV 608
           + EF++    DL    +FVFTP+G + NLP GAT +D+AY IHT+IGNK V AKVNG +V
Sbjct: 373 ATEFMEGFKLDLFSDEIFVFTPKGVVINLPAGATPIDFAYKIHTDIGNKCVGAKVNGKIV 432

Query: 609 SPTHVLANAEVVEIITYNVS 628
           +  + L   E+VEI+T + S
Sbjct: 433 TLDYKLKTGEIVEILTSSSS 452


>gi|168204879|ref|ZP_02630884.1| GTP pyrophosphokinase [Clostridium perfringens E str. JGS1987]
 gi|422346604|ref|ZP_16427518.1| RelA/SpoT family protein [Clostridium perfringens WAL-14572]
 gi|422874854|ref|ZP_16921339.1| GTP pyrophosphokinase [Clostridium perfringens F262]
 gi|170663656|gb|EDT16339.1| GTP pyrophosphokinase [Clostridium perfringens E str. JGS1987]
 gi|373226149|gb|EHP48476.1| RelA/SpoT family protein [Clostridium perfringens WAL-14572]
 gi|380304188|gb|EIA16478.1| GTP pyrophosphokinase [Clostridium perfringens F262]
          Length = 726

 Score =  363 bits (932), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 215/500 (43%), Positives = 298/500 (59%), Gaps = 54/500 (10%)

Query: 134 LRPTISYLSPN----ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDW 189
           L   IS +  N    +++LV++A  LAFEAH  QKR SGEP+IIHP+ VA IL ++ +D 
Sbjct: 2   LEELISKIKANGNNVDIDLVKKAYDLAFEAHKEQKRESGEPYIIHPISVAMILADMGMDT 61

Query: 190 ESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVK 249
            +I AGLLHD +EDT+  T+E I   F   V  +V+G   V+KLGK+K K    S ++ +
Sbjct: 62  NTIVAGLLHDVIEDTDY-TYEDISNIFNVEVANLVDG---VTKLGKIKYK----SKEEQQ 113

Query: 250 ADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGM 309
           AD++R+M LAM +++RVII+KLADRLHNMRTL +M P KQ   A ETL +FAPLA  LG+
Sbjct: 114 ADNVRKMLLAMAKDIRVIIIKLADRLHNMRTLKYMKPEKQKKKAQETLDIFAPLAHRLGI 173

Query: 310 YQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIED-DQFLDLMT 368
            +IK ELE+L   Y + E+Y  +   +A+   E E       K + + IE+  + LD   
Sbjct: 174 SKIKWELEDLCLRYIHPEEYYDLVNMIAEKRVERE-------KFISRIIEELKENLDKAN 226

Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
           + ++I    K  YSIY+ ++    SI ++  +  +RI            L +  + CY V
Sbjct: 227 IDSDIEGRPKHFYSIYRKMVNKHKSIEQIFDLTAIRI------------LVNTVKDCYAV 274

Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAER 488
           LG+VH I+ PIP   KDYIA PKPN YQSLHTT+I    ++    E+QIRT EM   AE 
Sbjct: 275 LGIVHTIYKPIPGRFKDYIAMPKPNMYQSLHTTVIGSEGKT---FEIQIRTFEMHRTAEY 331

Query: 489 GIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMT 548
           GIAAH+  +  VTG              K +   N     +++WL  I EWQ+E V    
Sbjct: 332 GIAAHWKYKSGVTG-----------TDSKDMTFEN-----KLTWLRDILEWQKEAVD--- 372

Query: 549 SREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLV 608
           + EF++    DL    +FVFTP+G + NLP GAT +D+AY IHT+IGNK V AKVNG +V
Sbjct: 373 ATEFMEGFKLDLFSDEIFVFTPKGVVINLPAGATPIDFAYKIHTDIGNKCVGAKVNGKIV 432

Query: 609 SPTHVLANAEVVEIITYNVS 628
           +  + L   E+VEI+T + S
Sbjct: 433 TLDYKLKTGEIVEILTSSSS 452


>gi|182624408|ref|ZP_02952192.1| GTP pyrophosphokinase [Clostridium perfringens D str. JGS1721]
 gi|177910411|gb|EDT72788.1| GTP pyrophosphokinase [Clostridium perfringens D str. JGS1721]
          Length = 726

 Score =  363 bits (932), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 215/500 (43%), Positives = 298/500 (59%), Gaps = 54/500 (10%)

Query: 134 LRPTISYLSPN----ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDW 189
           L   IS +  N    +++LV++A  LAFEAH  QKR SGEP+IIHP+ VA IL ++ +D 
Sbjct: 2   LEELISKIKANGNNVDIDLVKKAYDLAFEAHKEQKRESGEPYIIHPISVAMILADMGMDT 61

Query: 190 ESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVK 249
            +I AGLLHD +EDT+  T+E I   F   V  +V+G   V+KLGK+K K    S ++ +
Sbjct: 62  NTIVAGLLHDVIEDTDY-TYEDISNIFNVEVANLVDG---VTKLGKIKYK----SKEEQQ 113

Query: 250 ADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGM 309
           AD++R+M LAM +++RVII+KLADRLHNMRTL +M P KQ   A ETL +FAPLA  LG+
Sbjct: 114 ADNVRKMLLAMAKDIRVIIIKLADRLHNMRTLKYMKPEKQKKKAQETLDIFAPLAHRLGI 173

Query: 310 YQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIED-DQFLDLMT 368
            +IK ELE+L   Y + E+Y  +   +A+   E E       K + + IE+  + LD   
Sbjct: 174 SKIKWELEDLCLRYIHPEEYYDLVNMIAEKRVERE-------KFISRIIEELKENLDKAN 226

Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
           + ++I    K  YSIY+ ++    SI ++  +  +RI            L +  + CY V
Sbjct: 227 IDSDIEGRPKHFYSIYRKMVNKHKSIEQIFDLTAIRI------------LVNTVKDCYAV 274

Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAER 488
           LG+VH I+ PIP   KDYIA PKPN YQSLHTT+I    ++    E+QIRT EM   AE 
Sbjct: 275 LGIVHTIYKPIPGRFKDYIAMPKPNMYQSLHTTVIGSEGKT---FEIQIRTFEMHRTAEY 331

Query: 489 GIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMT 548
           GIAAH+  +  VTG              K +   N     +++WL  I EWQ+E V    
Sbjct: 332 GIAAHWKYKSGVTG-----------TDSKDMTFEN-----KLTWLRDILEWQKEAVD--- 372

Query: 549 SREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLV 608
           + EF++    DL    +FVFTP+G + NLP GAT +D+AY IHT+IGNK V AKVNG +V
Sbjct: 373 ATEFMEGFKLDLFSDEIFVFTPKGVVINLPAGATPIDFAYKIHTDIGNKCVGAKVNGKIV 432

Query: 609 SPTHVLANAEVVEIITYNVS 628
           +  + L   E+VEI+T + S
Sbjct: 433 TLDYKLKTGEIVEILTSSSS 452


>gi|168214142|ref|ZP_02639767.1| GTP pyrophosphokinase [Clostridium perfringens CPE str. F4969]
 gi|168215563|ref|ZP_02641188.1| GTP pyrophosphokinase [Clostridium perfringens NCTC 8239]
 gi|170714350|gb|EDT26532.1| GTP pyrophosphokinase [Clostridium perfringens CPE str. F4969]
 gi|182382330|gb|EDT79809.1| GTP pyrophosphokinase [Clostridium perfringens NCTC 8239]
          Length = 726

 Score =  363 bits (932), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 215/500 (43%), Positives = 298/500 (59%), Gaps = 54/500 (10%)

Query: 134 LRPTISYLSPN----ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDW 189
           L   IS +  N    +++LV++A  LAFEAH  QKR SGEP+IIHP+ VA IL ++ +D 
Sbjct: 2   LEELISKIKANGNNVDIDLVKKAYDLAFEAHKEQKRESGEPYIIHPISVAMILADMGMDT 61

Query: 190 ESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVK 249
            +I AGLLHD +EDT+  T+E I   F   V  +V+G   V+KLGK+K K    S ++ +
Sbjct: 62  NTIVAGLLHDVIEDTDY-TYEDISNIFNVEVANLVDG---VTKLGKIKYK----SKEEQQ 113

Query: 250 ADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGM 309
           AD++R+M LAM +++RVII+KLADRLHNMRTL +M P KQ   A ETL +FAPLA  LG+
Sbjct: 114 ADNVRKMLLAMAKDIRVIIIKLADRLHNMRTLKYMKPEKQKKKAQETLDIFAPLAHRLGI 173

Query: 310 YQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIED-DQFLDLMT 368
            +IK ELE+L   Y + E+Y  +   +A+   E E       K + + IE+  + LD   
Sbjct: 174 SKIKWELEDLCLRYIHPEEYYDLVNMIAEKRVERE-------KFISRIIEELKENLDKAN 226

Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
           + ++I    K  YSIY+ ++    SI ++  +  +RI            L +  + CY V
Sbjct: 227 IDSDIEGRPKHFYSIYRKMVNKHKSIEQIFDLTAIRI------------LVNTVKDCYAV 274

Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAER 488
           LG+VH I+ PIP   KDYIA PKPN YQSLHTT+I    ++    E+QIRT EM   AE 
Sbjct: 275 LGIVHTIYKPIPGRFKDYIAMPKPNMYQSLHTTVIGSEGKT---FEIQIRTFEMHRTAEY 331

Query: 489 GIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMT 548
           GIAAH+  +  VTG              K +   N     +++WL  I EWQ+E V    
Sbjct: 332 GIAAHWKYKSGVTG-----------TDSKDMTFEN-----KLTWLRDILEWQKEAVD--- 372

Query: 549 SREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLV 608
           + EF++    DL    +FVFTP+G + NLP GAT +D+AY IHT+IGNK V AKVNG +V
Sbjct: 373 ATEFMEGFKLDLFSDEIFVFTPKGVVINLPAGATPIDFAYKIHTDIGNKCVGAKVNGKIV 432

Query: 609 SPTHVLANAEVVEIITYNVS 628
           +  + L   E+VEI+T + S
Sbjct: 433 TLDYKLKTGEIVEILTSSSS 452


>gi|383454940|ref|YP_005368929.1| GTP pyrophosphokinase [Corallococcus coralloides DSM 2259]
 gi|380734107|gb|AFE10109.1| GTP pyrophosphokinase [Corallococcus coralloides DSM 2259]
          Length = 739

 Score =  362 bits (930), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 203/497 (40%), Positives = 301/497 (60%), Gaps = 51/497 (10%)

Query: 129 RLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
           RL + L+   SY    +L+++++A + + + H GQ R+SGEP++IHP+EVA IL EL+LD
Sbjct: 3   RLNDILQRVASYHPDPDLDIIKKAYVYSAKVHQGQLRKSGEPYLIHPLEVAGILAELKLD 62

Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
             SI  GLLHDT+EDT + T E + E FG  V ++V+G TK+SK       +   S ++ 
Sbjct: 63  EASIVTGLLHDTIEDT-LATAEELTELFGPEVAQLVDGVTKLSKF----SASATLSQEEK 117

Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
           +A++ R+M +AM +++RVI+VKLADR HNMRTL HM   KQ+ I  ETL ++APLA  LG
Sbjct: 118 QAENFRKMIIAMAQDIRVILVKLADRTHNMRTLDHMSEEKQARIGQETLDIYAPLANRLG 177

Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
           +  IK+ELE+LSF Y   +++  ++ ++    KE E  +E+   ++  K+++        
Sbjct: 178 ISWIKTELEDLSFRYVKPQEFFALEEQLNKRKKEREAYIEDTCDLMRAKLQE------RG 231

Query: 369 VKTEIRSVCKEPYSIYKAVLKSRG-SINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYH 427
           +K ++    K  YSI+K + KS+G   ++++ I   RII    P             CY 
Sbjct: 232 LKGDVSGRFKHVYSIWKKI-KSQGIDFDQIHDIIAFRIIAPSVPS------------CYE 278

Query: 428 VLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAE 487
            LG+VH +W P+P   KD+IA PKPN YQSLHTT+I  L E   R+EVQIRT EM  IAE
Sbjct: 279 ALGMVHQMWKPVPGRFKDFIAIPKPNMYQSLHTTVIGPLSE---RVEVQIRTAEMHKIAE 335

Query: 488 RGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNM 547
            GIAAH+            A   GR+P  K           + +WL  + EWQ++     
Sbjct: 336 EGIAAHW------------AYKEGRAPISKD--------DEKFAWLRQLMEWQQDL---K 372

Query: 548 TSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNL 607
             +EF++T+  DL    VFVFTP+G++++LP+GAT VD+AY IH+++G + V AKVNG +
Sbjct: 373 DPKEFLETVKVDLFTDEVFVFTPKGDVRSLPRGATPVDFAYAIHSDVGGRCVGAKVNGKI 432

Query: 608 VSPTHVLANAEVVEIIT 624
           V   + L N + VE++T
Sbjct: 433 VPLRYKLKNGDTVEVLT 449


>gi|302389921|ref|YP_003825742.1| (p)ppGpp synthetase I SpoT/RelA [Thermosediminibacter oceani DSM
           16646]
 gi|302200549|gb|ADL08119.1| (p)ppGpp synthetase I, SpoT/RelA [Thermosediminibacter oceani DSM
           16646]
          Length = 721

 Score =  362 bits (929), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 211/486 (43%), Positives = 289/486 (59%), Gaps = 53/486 (10%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           SY    +LELVRRA   A  AHDGQ R SGE FI HP+EVA IL +LELD  +IAA LLH
Sbjct: 13  SYNPSADLELVRRAYEFAKNAHDGQHRVSGELFIFHPLEVAMILADLELDTITIAASLLH 72

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDTN  + E I + FG+ +  +V+G TK+SKL + K K E       +A++LR+MFL
Sbjct: 73  DVVEDTNY-SLEDIAKNFGSEIALLVDGVTKLSKL-EYKTKEEQ------QAENLRKMFL 124

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM +++RVI++KLADRLHNMRTL ++P  KQ  IA ETL++FAPLA  LG+ +IK ELE+
Sbjct: 125 AMAKDIRVILIKLADRLHNMRTLKYLPEKKQKEIAVETLEIFAPLAHRLGISKIKWELED 184

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
           L+F Y     Y ++  +VA   +E E+ +     +L ++      L    +K EI+   K
Sbjct: 185 LAFRYLEPNHYYELVDKVAKKRREREEHINNMIALLRER------LTAAGIKAEIQGRPK 238

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIYK + +   S  ++  +  +R+I+               + CY  LG+VH +W P
Sbjct: 239 HFYSIYKKMKEQNKSFEQIFDLTAVRVIV------------DTVRDCYAALGVVHTLWKP 286

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           IP   KDYIA PKPN YQSLHTT+I    E    LE+QIRT EM   AE GIAAH+    
Sbjct: 287 IPGRFKDYIAMPKPNMYQSLHTTVIDSSGEP---LEIQIRTYEMHKTAEYGIAAHW---- 339

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                        R   G        +   ++SWL  I +WQ +      +REF++++  
Sbjct: 340 -------------RYKEGN----KEDDFDKKLSWLREILDWQRDL---RDAREFMESLKI 379

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           DL    V+VFTP+G++ +LP G+  +D+AY IHT+IGN+ V AKVNG +V   + L N +
Sbjct: 380 DLFADEVYVFTPKGDVIDLPAGSCPIDFAYRIHTDIGNRCVGAKVNGKMVPLDYKLTNGD 439

Query: 619 VVEIIT 624
           +VEIIT
Sbjct: 440 IVEIIT 445


>gi|323450143|gb|EGB06026.1| hypothetical protein AURANDRAFT_10270, partial [Aureococcus
           anophagefferens]
          Length = 504

 Score =  362 bits (929), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 220/489 (44%), Positives = 298/489 (60%), Gaps = 38/489 (7%)

Query: 146 LELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTN 205
           L  V  AL +A  AH GQ RRSGEPFI+HPV VA +L  L +D E++AAGLLHDTVEDT 
Sbjct: 3   LSFVHDALRVAHGAHAGQMRRSGEPFIVHPVAVAGLLCGLGMDRETVAAGLLHDTVEDT- 61

Query: 206 VVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVR 265
            VT E IE  FGA VR IVEGETKVSKL KL  + +         ++LRQMF++MT++ R
Sbjct: 62  AVTLEEIEATFGADVRAIVEGETKVSKLPKLAKREQ--------LENLRQMFISMTDDYR 113

Query: 266 VIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTN 325
           +IIVKLADRLHNMRTL HMP HKQ  IA ETL++FAPLA  LG++  K+ELE+ +F Y +
Sbjct: 114 IIIVKLADRLHNMRTLEHMPRHKQLRIARETLEIFAPLAHRLGLWTFKAELEDWAFRYAH 173

Query: 326 AEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYK 385
              YA ++  +      +E  L+ + K L  ++  D    L  VK  +    KE YS++ 
Sbjct: 174 PGPYAALEAALEVRRSRYESALKGSRKALEARLAADP--KLRGVKVSVSGRTKELYSLWL 231

Query: 386 AVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQ----ICYHVLGLVHGI--WTPI 439
            +   R  ++ V  +  LR++++        PL + ++    +CYHVLGLV  +     +
Sbjct: 232 KM--ERADLDGVPDVVALRVVLEVPRDGAAEPLEAWRERSTWLCYHVLGLVQQLKGCEAV 289

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHY---SG 496
           PR +KDYI+ PKPNGYQSLH +L     + +  +EVQIRT  M  +AE G+AAH+    G
Sbjct: 290 PR-VKDYISFPKPNGYQSLHASLRREAEDQV--VEVQIRTAWMHEVAEHGMAAHWLYKDG 346

Query: 497 RVFVTGLVGHARP-NGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDT 555
              V  L     P +GR    K            +SWLN++++WQ E     +SREFV+T
Sbjct: 347 LFSVEDLDDDGEPADGRRGVAKPYA---------VSWLNSVKDWQHEI---HSSREFVET 394

Query: 556 ITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLA 615
           I +++LG RVFVF   G+I +L +GATV+D A+ IHTEIG K+  A VNG  V  ++ L 
Sbjct: 395 IRKEVLGKRVFVFLRDGQILDLSRGATVLDAAFHIHTEIGLKVATAYVNGQEVQLSYELK 454

Query: 616 NAEVVEIIT 624
           N +VV + T
Sbjct: 455 NGDVVSVST 463


>gi|255280796|ref|ZP_05345351.1| GTP diphosphokinase [Bryantella formatexigens DSM 14469]
 gi|255268733|gb|EET61938.1| RelA/SpoT family protein [Marvinbryantia formatexigens DSM 14469]
          Length = 774

 Score =  361 bits (927), Expect = 6e-97,   Method: Compositional matrix adjust.
 Identities = 208/507 (41%), Positives = 306/507 (60%), Gaps = 60/507 (11%)

Query: 126 SPERLWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
            P+ L+++L  +I    P+ +  ++ +A  +A EAH GQKR+SGEP+IIHP+ VA IL +
Sbjct: 33  DPDALYQELIASIKRYHPSADTSMIEKAYKIASEAHKGQKRKSGEPYIIHPLCVAIILAD 92

Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
           LE+D E+I AGLLHD VEDT V+T E I +EFG  V ++V+G   V+KLG+L    +   
Sbjct: 93  LEMDKETITAGLLHDVVEDT-VMTSEEIRQEFGEDVEQLVDG---VTKLGQLSYSADKIE 148

Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
           VQ   A++LR+MFLAM +++RVI++KLADRLHNMRTL +M P KQ   A ET+ ++AP+A
Sbjct: 149 VQ---AENLRKMFLAMAKDIRVILIKLADRLHNMRTLKYMSPEKQKEKARETMDIYAPIA 205

Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
           + LG+ +IK EL++LS  Y   + Y  +  +VA    E EK ++     + K IED    
Sbjct: 206 QRLGISKIKVELDDLSLKYLQPDVYYDLVEKVALRKTEREKFVQGIVDEVKKHIED---- 261

Query: 365 DLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
               ++ ++    K  +SIYK ++    +I+++  +  +RII+               + 
Sbjct: 262 --AGIRAQVDGRVKHFFSIYKKMVNQDKTIDQIYDLFAVRIIV------------DTVKD 307

Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRT 479
           CY  LG++H ++TPIP   KDYIA PKPN YQSLHTTLI     PF        E+QIRT
Sbjct: 308 CYAALGVIHEMYTPIPGRFKDYIAMPKPNMYQSLHTTLIGPNGTPF--------EIQIRT 359

Query: 480 EEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREW 539
            EM   AE GIAAH+  +          + +G+ P       +++    +++WL  I EW
Sbjct: 360 FEMHKTAEYGIAAHWKYK---------EQSDGKKP-------DSSREEEKMTWLRQILEW 403

Query: 540 QEEFVGNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNK 597
           Q +   N    EF++ +    DL    V+ FTP G++KNLP G+T +D+AY +H+ +GNK
Sbjct: 404 QRDMSDN---HEFLNLLKSDLDLFAENVYCFTPAGDVKNLPAGSTPIDFAYNVHSAVGNK 460

Query: 598 MVAAKVNGNLVSPTHVLANAEVVEIIT 624
           MV A+VNG LV+  +V+ N + VEIIT
Sbjct: 461 MVGARVNGKLVNIDYVIQNGDRVEIIT 487


>gi|121535597|ref|ZP_01667404.1| (p)ppGpp synthetase I, SpoT/RelA [Thermosinus carboxydivorans Nor1]
 gi|121305837|gb|EAX46772.1| (p)ppGpp synthetase I, SpoT/RelA [Thermosinus carboxydivorans Nor1]
          Length = 735

 Score =  361 bits (927), Expect = 6e-97,   Method: Compositional matrix adjust.
 Identities = 204/493 (41%), Positives = 296/493 (60%), Gaps = 51/493 (10%)

Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
           E ++   SY     +ELV++A   A EAH GQ R SGE +I HP+ VA+IL +L++D  +
Sbjct: 11  EIIKQIQSYQPDAPIELVQKAYAFAGEAHRGQYRVSGEEYITHPLGVAKILADLQIDALT 70

Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
           I+AGLLHD VEDT V T E IE++FG  +  +V+G TK+S++       E  S ++ + +
Sbjct: 71  ISAGLLHDVVEDTPV-TLEEIEKQFGKEIAMLVDGVTKLSRM-------EYKSKEEQQLE 122

Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
             R+MFLAM +++RV+++KLADRLHNMRTL +MPP KQ  IA ETL++FAPLA  LG++ 
Sbjct: 123 SYRKMFLAMAKDIRVVLIKLADRLHNMRTLKYMPPAKQKEIARETLEIFAPLANRLGIFS 182

Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
           IK ELE+L+F +   E Y ++  +V    +E E  + EA KIL ++      L  M +K 
Sbjct: 183 IKWELEDLAFRFLEPEKYYELVEKVKQKRQEREALINEAIKILSER------LTAMGIKA 236

Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
           EI+   K  YSIYK + K    ++E+  ++ +R+I+               + CY  LG+
Sbjct: 237 EIQGRPKHFYSIYKKMQKDNKDLSEIYDLSAVRVIV------------DTIKDCYAALGI 284

Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
           VH +W PIP   KDYIA PK N YQSLHTT+I    +    LE+QIRT EM   +E GIA
Sbjct: 285 VHTLWKPIPGRFKDYIAMPKSNMYQSLHTTVIGLQGQP---LEIQIRTVEMHRTSEYGIA 341

Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
           AH+    +  G  G  R                +   ++SWL  + EW +E       RE
Sbjct: 342 AHWR---YKEGGKGTDR----------------DFEQKLSWLRQLLEWHQEL---RDPRE 379

Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
           F++ +  D+    VFVFTP+G++ +LP G+  +D+AY IHT++G++ V A+VNG +V   
Sbjct: 380 FMEALKLDVFADEVFVFTPKGDVIDLPAGSVPIDFAYRIHTDVGHRCVGARVNGKIVPLE 439

Query: 612 HVLANAEVVEIIT 624
           + LAN ++VEIIT
Sbjct: 440 YKLANGDIVEIIT 452


>gi|260892286|ref|YP_003238383.1| (p)ppGpp synthetase I SpoT/RelA [Ammonifex degensii KC4]
 gi|260864427|gb|ACX51533.1| (p)ppGpp synthetase I, SpoT/RelA [Ammonifex degensii KC4]
          Length = 710

 Score =  360 bits (925), Expect = 9e-97,   Method: Compositional matrix adjust.
 Identities = 210/496 (42%), Positives = 294/496 (59%), Gaps = 53/496 (10%)

Query: 130 LWEDLRPTISYLSPNELE-LVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
           L+E+L   +   +P   E L+R+A   A   H GQ+R SGEPF+ HPV VARIL ELELD
Sbjct: 3   LYEELLAQVKAYNPGVNEALLRKAFDFAQAKHAGQRRFSGEPFLSHPVAVARILAELELD 62

Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
            E+I AGLLHD VEDT   T E IE EFGA +  +V+G TK+S+L       +  S ++ 
Sbjct: 63  TETIVAGLLHDVVEDTGT-TLEEIEHEFGAEIAALVDGVTKLSRL-------QFRSQEEQ 114

Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
           +A++LR+MF+AM ++VRV+++KLADRLHN+RTL ++PP KQ +IA ETL++FAPLA  LG
Sbjct: 115 QAENLRKMFVAMAKDVRVVLIKLADRLHNLRTLQYLPPEKQRAIAKETLEIFAPLAHRLG 174

Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
           +Y++K ELE+L+F Y   E Y ++  +VA      E+   E   IL K++E+        
Sbjct: 175 IYRLKWELEDLAFRYLEPERYRELAAKVAKTRAAREEYTRELIAILQKRLEE------AG 228

Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
           +K E+    K  YSIY+ +L+     +E+               +G+  L    + CY V
Sbjct: 229 IKAELMGRPKNLYSIYQKMLRDGKEYSEIYD------------RTGIRALVETVRDCYAV 276

Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAER 488
           LG+VH +W P+P   KDYIA PK N YQSLHTT+I    E    +EVQIRT EM   AE 
Sbjct: 277 LGVVHTLWKPVPGRFKDYIAMPKENMYQSLHTTVIGPQGEP---VEVQIRTYEMHRTAEY 333

Query: 489 GIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMT 548
           GIAAH+                 R   G+T    +  +  + +WL  + EW +E      
Sbjct: 334 GIAAHW-----------------RYKEGQT---RDKQLEAKFAWLRELLEWVQEM---RD 370

Query: 549 SREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLV 608
           +REF++ +  D+    VFVFTP+G++  LP GA  +D+AY IHTE+G++   AKVNG LV
Sbjct: 371 AREFMERLKIDVFSDVVFVFTPKGDVVELPAGAVPLDFAYRIHTEVGHRYKGAKVNGRLV 430

Query: 609 SPTHVLANAEVVEIIT 624
              + L   ++VEIIT
Sbjct: 431 PLDYQLKTGDIVEIIT 446


>gi|220932056|ref|YP_002508964.1| (p)ppGpp synthetase I SpoT/RelA [Halothermothrix orenii H 168]
 gi|219993366|gb|ACL69969.1| (p)ppGpp synthetase I, SpoT/RelA [Halothermothrix orenii H 168]
          Length = 716

 Score =  360 bits (925), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 213/485 (43%), Positives = 299/485 (61%), Gaps = 52/485 (10%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y +  +LELV+RA   A +AH+GQ R SGEPFI HP+ VA IL ELELD  SI+A LLHD
Sbjct: 13  YTTNPDLELVKRAYNFAKDAHEGQFRVSGEPFIEHPLGVACILAELELDIISISAALLHD 72

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            VEDT+V T + IEEEFG  +  +V+G TK+++L + K K E+      +A++LR+MFLA
Sbjct: 73  VVEDTSV-TSKNIEEEFGDEIALLVDGVTKLTRL-EFKSKEEH------QAENLRKMFLA 124

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M+E++RV+++KLADRLHNMRTL  +   KQ   A ETL+++APLA  LGM ++K ELE+L
Sbjct: 125 MSEDIRVVLIKLADRLHNMRTLRFLAKEKQVEKAKETLEIYAPLAHRLGMSRLKWELEDL 184

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           SF + +++ Y ++  +VA   K+  ++++EA KIL  K+ +   L       EI    K 
Sbjct: 185 SFRFIDSKMYYEIAEKVAANRKQRIRDIKEAIKILNDKLGNQGIL------AEIYGRPKH 238

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIY+ + +     NE+  +  +RII+            +  + CY VLG+VH IW PI
Sbjct: 239 LYSIYQKMKRKEVDFNEIYDLTAIRIIV------------NSVKECYEVLGIVHEIWKPI 286

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK N YQSLHTT+I    +    LEVQIRT EM   AE GIAAH+     
Sbjct: 287 PGRFKDYIAMPKSNMYQSLHTTVIGPKGDP---LEVQIRTPEMHRTAEYGIAAHW----- 338

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
                       +   GKT      +   ++SWL  I EWQ++       +EF++ +  D
Sbjct: 339 ------------KYKEGKT---GKDDFEEKLSWLRQILEWQKDL---KEPQEFIENLKID 380

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           L    VFVFTP+G++ +LP G+T VD+AY IHTE+G+  V AKVNG +V   + ++N ++
Sbjct: 381 LFEDEVFVFTPKGDVISLPTGSTPVDFAYNIHTEVGHSCVGAKVNGKIVPLEYRMSNGDI 440

Query: 620 VEIIT 624
           VEI+T
Sbjct: 441 VEILT 445


>gi|297544507|ref|YP_003676809.1| (p)ppGpp synthetase I SpoT/RelA [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
 gi|296842282|gb|ADH60798.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
          Length = 719

 Score =  360 bits (925), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 202/484 (41%), Positives = 297/484 (61%), Gaps = 62/484 (12%)

Query: 146 LELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTN 205
           L+L+ ++   A  AHDGQ R SGEP+I+HP+EV+ IL +LELD  +IAAGLLHD +EDT+
Sbjct: 19  LDLIYKSYDFAVNAHDGQMRNSGEPYIVHPIEVSYILADLELDITTIAAGLLHDVIEDTD 78

Query: 206 VVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVR 265
           V T+E++ E+FG  +  +V+G   V+KLGK++ K    S  + +A+++R+M +AM +++R
Sbjct: 79  V-TYEQLLEKFGKEIADLVDG---VTKLGKIEYK----SKVEQQAENMRKMLIAMAKDIR 130

Query: 266 VIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTN 325
           VI++KLADRLHNMRTL ++PP KQ   A ETL+++AP+A  LG+ +IK ELE+L   Y +
Sbjct: 131 VILIKLADRLHNMRTLKYLPPDKQKEKAEETLEIYAPIAHRLGISKIKWELEDLCLRYLH 190

Query: 326 AEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYK 385
            ++Y  +  +VA   KE E+ ++     + +K+++      M ++ E+    K  YSIYK
Sbjct: 191 PDEYYDLVEKVAAKRKEREELIQNIITTIKEKLKE------MGIQAEVDGRPKHFYSIYK 244

Query: 386 AVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKD 445
            +     S +++  +  +RII+            +  + CY VLG+VH +W PIP   KD
Sbjct: 245 KMKTQNKSFDQIYDLLAVRIIV------------NTVKDCYGVLGIVHTLWKPIPGRFKD 292

Query: 446 YIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFV 500
           YIA PKPN YQSLHTT+I     PF        E+QIRT EM   AE GIAAH+      
Sbjct: 293 YIAMPKPNMYQSLHTTVIGPKGEPF--------EIQIRTWEMHKTAEYGIAAHW------ 338

Query: 501 TGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDL 560
                      +   GKT          ++SWL  + EWQ+E      ++EF++T+  DL
Sbjct: 339 -----------KYKEGKT---TEDKFDQKLSWLRQLLEWQKEL---KDAKEFMETLKIDL 381

Query: 561 LGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVV 620
               VFVFTP+G++ NLP G+T VD+AY IHTEIG+++  AKVNG LV   + L N ++V
Sbjct: 382 FTDEVFVFTPKGDVINLPAGSTPVDFAYSIHTEIGHRLNGAKVNGKLVPINYQLKNGDIV 441

Query: 621 EIIT 624
           EI+ 
Sbjct: 442 EILV 445


>gi|147677380|ref|YP_001211595.1| guanosine polyphosphate pyrophosphohydrolases/synthetases
           [Pelotomaculum thermopropionicum SI]
 gi|146273477|dbj|BAF59226.1| guanosine polyphosphate pyrophosphohydrolases/synthetases
           [Pelotomaculum thermopropionicum SI]
          Length = 765

 Score =  360 bits (924), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 207/500 (41%), Positives = 301/500 (60%), Gaps = 53/500 (10%)

Query: 126 SPERLWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
            PE L+++L   I   +P  +L +V  A   A  AH  QKR SGEPFI+HP+EVA+IL E
Sbjct: 35  DPEALFKELLEKIKSYNPKADLSVVVAAYEFAANAHREQKRFSGEPFIVHPLEVAKILAE 94

Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
           LELD E++ AGLLHD VEDT V T + I E+FG     +V+G TK+S++       E  S
Sbjct: 95  LELDQETLVAGLLHDVVEDTGV-TLQDIREQFGVETALLVDGTTKLSRI-------EYKS 146

Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
            ++++A++LR+MFLAM +++RVI++KLADRLHN+RTL + P  KQ  IA ETL++FAPLA
Sbjct: 147 KEELQAENLRKMFLAMAKDIRVILIKLADRLHNLRTLKYHPEPKQVEIANETLEIFAPLA 206

Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
             LG+Y+IK ELE+LSF +   + Y ++  ++A    + E+ +     IL  K+E+    
Sbjct: 207 HRLGIYRIKWELEDLSFRFKEPDRYFELVNKIASTRDKREEYIRSVISILAGKLEE---- 262

Query: 365 DLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
             + ++ EI+   K  YSIY  +++ +  +NE+  +  +R       C     L    + 
Sbjct: 263 --VGIEAEIQGRPKHFYSIYAKMIEQQKDLNEIFDVMAVR-------C-----LVETVRD 308

Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDL 484
           CY  LG+VH +WTPIP   KDYIA PK N YQSLHTT+I    E    LE+QIRT EM  
Sbjct: 309 CYATLGIVHTMWTPIPGRFKDYIAMPKSNMYQSLHTTVIGPQGEP---LEIQIRTREMHR 365

Query: 485 IAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFV 544
            AE GIAAH+             +  GRS R             +++WL  + EWQ +  
Sbjct: 366 TAEYGIAAHW-----------RYKEGGRSDR---------EFDKKLAWLRQLLEWQHDL- 404

Query: 545 GNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVN 604
               +REF++++  DL    VFVF+P+G++  LP G+  +D+AY IHT++G++ V A+VN
Sbjct: 405 --RDAREFMESLKIDLFADVVFVFSPKGDVIELPAGSIPLDFAYRIHTDVGHRCVGARVN 462

Query: 605 GNLVSPTHVLANAEVVEIIT 624
           G +V   + L N ++VEI+T
Sbjct: 463 GRIVPLEYKLKNGDIVEILT 482


>gi|169343681|ref|ZP_02864680.1| GTP pyrophosphokinase [Clostridium perfringens C str. JGS1495]
 gi|169298241|gb|EDS80331.1| GTP pyrophosphokinase [Clostridium perfringens C str. JGS1495]
          Length = 726

 Score =  360 bits (924), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 210/495 (42%), Positives = 297/495 (60%), Gaps = 52/495 (10%)

Query: 134 LRPTISYLSPN----ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDW 189
           L   IS +  N    +++LV++A  LAFEAH  QKR SGEP+I HP+ VA IL ++ +D 
Sbjct: 2   LEELISKIKANGNNVDIDLVKKAYDLAFEAHKEQKRESGEPYITHPISVAMILADMGMDT 61

Query: 190 ESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVK 249
            +I AGLLHD +EDT+  T+E I   F   V  +V+G   V+KLGK+K K    S ++ +
Sbjct: 62  NTIVAGLLHDVIEDTDY-TYEDISNIFNVEVANLVDG---VTKLGKIKYK----SKEEQQ 113

Query: 250 ADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGM 309
           AD++R+M LAM +++RVII+KLADRLHNMRTL +M P KQ   A ETL +FAPLA  LG+
Sbjct: 114 ADNVRKMLLAMAKDIRVIIIKLADRLHNMRTLKYMKPEKQKKKAQETLDIFAPLAHRLGI 173

Query: 310 YQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTV 369
            +IK ELE+L   Y + E+Y  +   +A+   E EK +      ++K+++++  LD   +
Sbjct: 174 SKIKWELEDLCLRYIHPEEYYDLVNMIAEKRVEREKFISR----IIKELKEN--LDKANI 227

Query: 370 KTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVL 429
            ++I    K  YSIY+ ++    SI ++  +  +RI            L +  + CY VL
Sbjct: 228 DSDIEGRPKHFYSIYRKMVNKHKSIEQIFDLTAIRI------------LVNTVKDCYAVL 275

Query: 430 GLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERG 489
           G+VH I+ PIP   KDYIA PKPN YQSLHTT+I    ++    E+QIRT EM   AE G
Sbjct: 276 GIVHTIYKPIPGRFKDYIAMPKPNMYQSLHTTVIGSEGKT---FEIQIRTFEMHRTAEYG 332

Query: 490 IAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTS 549
           IAAH+  +  + G              K +   N     +++WL  I EWQ+E V    +
Sbjct: 333 IAAHWKYKSGING-----------TDSKDMTFEN-----KLTWLRDILEWQKEAV---DA 373

Query: 550 REFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVS 609
            EF++    DL    +FVFTP+G + NLP GAT +D+AY IHT+IGNK V AKVNG +V+
Sbjct: 374 TEFMEGFKLDLFSDEIFVFTPKGVVINLPAGATPIDFAYKIHTDIGNKCVGAKVNGKIVT 433

Query: 610 PTHVLANAEVVEIIT 624
             + L   E+VEI+T
Sbjct: 434 LDYKLKTGEIVEILT 448


>gi|408356412|ref|YP_006844943.1| GTP pyrophosphokinase [Amphibacillus xylanus NBRC 15112]
 gi|407727183|dbj|BAM47181.1| GTP pyrophosphokinase [Amphibacillus xylanus NBRC 15112]
          Length = 729

 Score =  360 bits (924), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 204/499 (40%), Positives = 301/499 (60%), Gaps = 49/499 (9%)

Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
           ED+    SYLS ++++L+RRA   A++AH+ Q RRSGEP+IIHPV+VA IL +L LD E+
Sbjct: 10  EDVIEIASYLSDDDIKLIRRAFEYAYKAHENQYRRSGEPYIIHPVQVASILAKLGLDAET 69

Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
           IA G LHD VEDT+  T + IEE F   +  +V+G   V+KLGK++ K++       +A+
Sbjct: 70  IAGGFLHDVVEDTDK-TLKDIEEAFNEEIAMLVDG---VTKLGKIQYKSQEAQ----QAE 121

Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
           + R+MF+AM++++RVI++KLADR+HNMRTL ++PP KQ  IA ETL++FAPLA  LG+  
Sbjct: 122 NHRKMFIAMSKDIRVILIKLADRVHNMRTLKYLPPEKQRRIANETLEIFAPLAHRLGISA 181

Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
           IK ELE+++  Y N + Y     R+ +L K+  +E E  N I    IE  + L+ + ++ 
Sbjct: 182 IKWELEDVALRYLNPQQYY----RIVNLMKQKREERE--NYIEEVMIEVQKQLEQVNIRA 235

Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
           E     K  YSIY+ ++      +E+  +  +RII+            +  + CY VLG+
Sbjct: 236 EFSGRPKHIYSIYRKMMLQNKQFDEIYDLLAVRIIV------------NSIKDCYAVLGI 283

Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
           +H  W P+P   KDYIA PKPN YQSLHTT+I         LEVQIRT+EM  IAE GIA
Sbjct: 284 IHTCWKPMPGRFKDYIAMPKPNLYQSLHTTVIG---PKGAPLEVQIRTKEMHEIAEYGIA 340

Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
           AH++ +                  GK+V     N   +++W   I E Q E      + E
Sbjct: 341 AHWAYK-----------------EGKSVKPGKGNPEEKLAWFREILESQSE---TNDAEE 380

Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
           F++++  +L    V+VFTP+G++  LPKG+  +D+AY IHTEIGN  +  +VNG +    
Sbjct: 381 FMESLKVELFADMVYVFTPKGDVIELPKGSIPIDFAYKIHTEIGNHTIGTRVNGKMEPLD 440

Query: 612 HVLANAEVVEIITYNVSFS 630
           + L N ++VE++T   S+ 
Sbjct: 441 YQLKNGDIVEVLTSQHSYG 459


>gi|167629913|ref|YP_001680412.1| GTP pyrophosphokinase [Heliobacterium modesticaldum Ice1]
 gi|167592653|gb|ABZ84401.1| GTP pyrophosphokinase [Heliobacterium modesticaldum Ice1]
          Length = 736

 Score =  360 bits (924), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 207/483 (42%), Positives = 288/483 (59%), Gaps = 51/483 (10%)

Query: 142 SPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTV 201
           +P +LE VRRA   A  AH GQ R+SGEP+I HP+ VA IL +LELD  +IAAGLLHD V
Sbjct: 18  NPADLEFVRRAFEYADAAHTGQLRKSGEPYIYHPMAVAYILADLELDVATIAAGLLHDVV 77

Query: 202 EDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMT 261
           EDT  +T E++E++FG  V  +V+G TK+S+L       E HS Q+ + + LR+MFLAM 
Sbjct: 78  EDT-AITQEQLEKDFGPEVALMVDGVTKLSRL-------EFHSKQEQQVESLRKMFLAMA 129

Query: 262 EEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSF 321
           +++RVI++KLADRLHNMRTL H  P KQ  IA ET+++FAPLA  LG+ +IK ELE+L+ 
Sbjct: 130 KDIRVILIKLADRLHNMRTLKHQTPEKQREIAIETIELFAPLANRLGISRIKWELEDLAL 189

Query: 322 MYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPY 381
            Y   E Y  +  R+A    E E+ + E   IL +K      L  + +K EI    K  Y
Sbjct: 190 RYLEPETYYDLVTRIATKRAEREERINEIIAILREK------LAAVGIKAEISGRPKHFY 243

Query: 382 SIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPR 441
           SIY+ +   +  ++E+  +  +R+            L    + CY  LG++H IW PIP 
Sbjct: 244 SIYRKMTSQKKDLSEIYDLIAVRV------------LVDSVKDCYGALGIIHTIWKPIPM 291

Query: 442 AMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVT 501
             KDYIATPK N YQSLHTTL+  L E     EVQIRT EM   AE GIAAH+    +  
Sbjct: 292 RFKDYIATPKTNMYQSLHTTLVGPLGEP---FEVQIRTAEMHRTAEYGIAAHWK---YKE 345

Query: 502 GLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLL 561
           G     +  GRS   K            ++WL  + EWQ +      ++ F++T+  +  
Sbjct: 346 G----GKTQGRSFEEK------------LAWLRQLLEWQSD---QKDTQTFMETLKIEFF 386

Query: 562 GSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVE 621
              VFVFTP+G++  LP G+T +D+AY IH+ +G++ + AKVNG +V   + L N E++E
Sbjct: 387 SDAVFVFTPKGDVIELPAGSTPIDFAYRIHSNVGHRCMGAKVNGRIVPLDYRLNNGEIIE 446

Query: 622 IIT 624
           I+T
Sbjct: 447 ILT 449


>gi|18310920|ref|NP_562854.1| GTP pyrophosphokinase [Clostridium perfringens str. 13]
 gi|18145602|dbj|BAB81644.1| GTP pyrophosphokinase [Clostridium perfringens str. 13]
          Length = 726

 Score =  360 bits (924), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 210/495 (42%), Positives = 297/495 (60%), Gaps = 52/495 (10%)

Query: 134 LRPTISYLSPN----ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDW 189
           L   IS +  N    +++LV++A  LAFEAH  QKR SGEP+I HP+ VA IL ++ +D 
Sbjct: 2   LEELISKIKANGNNVDIDLVKKAYDLAFEAHKEQKRESGEPYITHPISVAMILADMGMDT 61

Query: 190 ESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVK 249
            +I AGLLHD +EDT+  T+E I   F   V  +V+G   V+KLGK+K K    S ++ +
Sbjct: 62  NTIVAGLLHDVIEDTDY-TYEDISNIFNVEVANLVDG---VTKLGKIKYK----SKEEQQ 113

Query: 250 ADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGM 309
           AD++R+M LAM +++RVII+KLADRLHNMRTL +M P KQ   A ETL +FAPLA  LG+
Sbjct: 114 ADNVRKMLLAMAKDIRVIIIKLADRLHNMRTLKYMKPEKQKKKAQETLDIFAPLAHRLGI 173

Query: 310 YQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTV 369
            +IK ELE+L   Y + E+Y  +   +A+   E EK +      ++K+++++  LD   +
Sbjct: 174 SKIKWELEDLCLRYIHPEEYYDLVNMIAEKRVEREKFISR----IIKELKEN--LDKANI 227

Query: 370 KTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVL 429
            ++I    K  YSIY+ ++    SI ++  +  +RI            L +  + CY VL
Sbjct: 228 DSDIEGRPKHFYSIYRKMVNKHKSIEQIFDLTAIRI------------LVNTVKDCYAVL 275

Query: 430 GLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERG 489
           G+VH I+ PIP   KDYIA PKPN YQSLHTT+I    ++    E+QIRT EM   AE G
Sbjct: 276 GIVHTIYKPIPGRFKDYIAMPKPNMYQSLHTTVIGSEGKT---FEIQIRTFEMHRTAEYG 332

Query: 490 IAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTS 549
           IAAH+  +  + G              K +   N     +++WL  I EWQ+E V    +
Sbjct: 333 IAAHWKYKSGING-----------TDSKDMTFEN-----KLTWLRDILEWQKEAV---DA 373

Query: 550 REFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVS 609
            EF++    DL    +FVFTP+G + NLP GAT +D+AY IHT+IGNK V AKVNG +V+
Sbjct: 374 TEFMEGFKLDLFSDEIFVFTPKGVVINLPAGATPIDFAYKIHTDIGNKCVGAKVNGKIVT 433

Query: 610 PTHVLANAEVVEIIT 624
             + L   E+VEI+T
Sbjct: 434 LDYKLKTGEIVEILT 448


>gi|227824350|ref|ZP_03989182.1| conserved hypothetical protein [Acidaminococcus sp. D21]
 gi|226904849|gb|EEH90767.1| conserved hypothetical protein [Acidaminococcus sp. D21]
          Length = 725

 Score =  360 bits (923), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 206/489 (42%), Positives = 294/489 (60%), Gaps = 46/489 (9%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           YL+P ++E VR A   A E H  QKR SGEP+IIHP+ VA IL +L +D  ++AA  LHD
Sbjct: 6   YLTPRQVEFVREAYNFAAEQHASQKRASGEPYIIHPLGVASILAQLHMDDTTLAAAFLHD 65

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            VEDT+V T +++ + FG  V  +V+G   V+KLGK+    E  S ++ + ++ R+MFLA
Sbjct: 66  VVEDTDV-TLDQLTDIFGLEVAGLVDG---VTKLGKI----EYISREEQQVENYRKMFLA 117

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M +++RV+++KLADRLHNMRT+ +MPP+KQ  I++ETL+++APLA  LG+Y IK ELE+L
Sbjct: 118 MAKDIRVVLIKLADRLHNMRTMKYMPPNKQKRISSETLEIYAPLAHRLGIYAIKWELEDL 177

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           SF Y   + Y ++  +V     E E  ++EA   L     D        +K EI+   K 
Sbjct: 178 SFRYMEPQHYYELVEQVKVKRHEREAMVQEAMDELSHLCSDS------GIKCEIQGRPKS 231

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIYK + K   SINE+  +  +R+            L    + CY VLG+VHG W PI
Sbjct: 232 FYSIYKKMQKDNKSINEIYDLLAVRV------------LVDSVKDCYGVLGIVHGKWRPI 279

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK NGYQSLHTT++     S   LE+QIRT EM  I+E G+AAH+  R  
Sbjct: 280 PGRFKDYIAVPKSNGYQSLHTTVVS---SSGQPLEIQIRTFEMHRISEYGVAAHW--RYK 334

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
            +G  G   P+           ++ +   +++WL  + +W  +        EFVDT+  D
Sbjct: 335 ESG--GSNMPSS----------SDKSADEKMAWLRQLLDWHRDM---RDPHEFVDTVKMD 379

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           +    VFVFTP+G++ +LP G+  +D+AY IHT +GN+ V AK+NG +V   + L N ++
Sbjct: 380 VFSDEVFVFTPQGDVIDLPFGSVPIDFAYRIHTGVGNRCVGAKINGKIVPLDYKLKNGDI 439

Query: 620 VEIITYNVS 628
           VEIIT   S
Sbjct: 440 VEIITSKTS 448


>gi|289578226|ref|YP_003476853.1| (p)ppGpp synthetase I SpoT/RelA [Thermoanaerobacter italicus Ab9]
 gi|289527939|gb|ADD02291.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacter italicus Ab9]
          Length = 719

 Score =  360 bits (923), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 202/484 (41%), Positives = 297/484 (61%), Gaps = 62/484 (12%)

Query: 146 LELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTN 205
           L+L+ ++   A  AHDGQ R SGEP+I+HP+EV+ IL +LELD  +IAAGLLHD +EDT+
Sbjct: 19  LDLIYKSYDFAVNAHDGQMRNSGEPYIVHPIEVSYILADLELDITTIAAGLLHDVIEDTD 78

Query: 206 VVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVR 265
           V T+E++ E+FG  +  +V+G   V+KLGK++ K    S  + +A+++R+M +AM +++R
Sbjct: 79  V-TYEQLLEKFGKEIADLVDG---VTKLGKIEYK----SKVEQQAENMRKMLIAMAKDIR 130

Query: 266 VIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTN 325
           VI++KLADRLHNMRTL ++PP KQ   A ETL+++AP+A  LG+ +IK ELE+L   Y +
Sbjct: 131 VILIKLADRLHNMRTLKYLPPDKQKEKAEETLEIYAPIAHRLGISKIKWELEDLCLRYLH 190

Query: 326 AEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYK 385
            ++Y  +  +VA   KE E+ ++     + +K+++      M ++ E+    K  YSIYK
Sbjct: 191 PDEYYDLVEKVAAKRKEREELIQNIITTIKEKLKE------MGIQAEVDGRPKHFYSIYK 244

Query: 386 AVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKD 445
            +     S +++  +  +RII+            +  + CY VLG+VH +W PIP   KD
Sbjct: 245 KMKTQNKSFDQIYDLLAVRIIV------------NTVKECYGVLGIVHTLWKPIPGRFKD 292

Query: 446 YIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFV 500
           YIA PKPN YQSLHTT+I     PF        E+QIRT EM   AE GIAAH+      
Sbjct: 293 YIAMPKPNMYQSLHTTVIGPKGEPF--------EIQIRTWEMHKTAEYGIAAHW------ 338

Query: 501 TGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDL 560
                      +   GKT          ++SWL  + EWQ+E      ++EF++T+  DL
Sbjct: 339 -----------KYKEGKT---TEDKFDQKLSWLRQLLEWQKEL---KDAKEFMETLKIDL 381

Query: 561 LGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVV 620
               VFVFTP+G++ NLP G+T VD+AY IHTEIG+++  AKVNG LV   + L N ++V
Sbjct: 382 FTDEVFVFTPKGDVINLPAGSTPVDFAYSIHTEIGHRLNGAKVNGKLVPINYQLKNGDIV 441

Query: 621 EIIT 624
           EI+ 
Sbjct: 442 EILV 445


>gi|284048851|ref|YP_003399190.1| (p)ppGpp synthetase I SpoT/RelA [Acidaminococcus fermentans DSM
           20731]
 gi|283953072|gb|ADB47875.1| (p)ppGpp synthetase I, SpoT/RelA [Acidaminococcus fermentans DSM
           20731]
          Length = 740

 Score =  359 bits (922), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 201/485 (41%), Positives = 293/485 (60%), Gaps = 46/485 (9%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           YL+P ++E VR A   A EAH  QKR SGEP+IIHP+ VA IL +L++D  ++AA  LHD
Sbjct: 21  YLTPRQVEFVREAYNFAAEAHAKQKRASGEPYIIHPLGVASILAQLQMDDVTLAAAFLHD 80

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            VEDT V T +++E+ FG  V  +V+G   V+KLGK+    E  S ++ + ++ R+MFLA
Sbjct: 81  VVEDTEV-TLDQMEDIFGREVAMLVDG---VTKLGKI----EYISREEQQVENYRKMFLA 132

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M +++RV+++KLADRLHNMRT+  MP +KQ  I++ETL+++APLA  LG+Y IK ELE+L
Sbjct: 133 MAKDIRVVLIKLADRLHNMRTMKFMPVNKQKRISSETLEIYAPLAHRLGIYAIKWELEDL 192

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           +F Y   + Y ++  +V     E E  ++EA   L K  E+        +  +I+   K 
Sbjct: 193 AFRYMEPQHYYELVEQVKVKRHEREAMVQEAMDELRKLCEES------GINCQIQGRPKS 246

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIYK + +   +INE+  +  +R+            L    + CY VLG+VHG W PI
Sbjct: 247 FYSIYKKMQRDHKTINEIYDLLAVRV------------LVDTVKDCYGVLGIVHGKWKPI 294

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK NGYQSLHTT++     S   LE+QIRT EM  ++E G+AAH+  +  
Sbjct: 295 PGRFKDYIAVPKSNGYQSLHTTVVS---SSGQPLEIQIRTFEMHKVSEYGVAAHWRYK-- 349

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
                        S   K    ++ N+  +++WL  + EW ++        EFVDT+  D
Sbjct: 350 ------------ESGGSKMPSSSDKNVDAKMAWLRQLLEWHKDM---RDPHEFVDTVKMD 394

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           +    VFVFTP+G++ +LP+G+  +D+AY +HT +GN  V AKVNG +V   + L N ++
Sbjct: 395 VFSDEVFVFTPQGDVLDLPEGSVPIDFAYRVHTGVGNSCVGAKVNGKIVPLDYHLKNGDI 454

Query: 620 VEIIT 624
           VEIIT
Sbjct: 455 VEIIT 459


>gi|110802270|ref|YP_699214.1| GTP pyrophosphokinase [Clostridium perfringens SM101]
 gi|110682771|gb|ABG86141.1| GTP pyrophosphokinase [Clostridium perfringens SM101]
          Length = 726

 Score =  359 bits (921), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 211/499 (42%), Positives = 299/499 (59%), Gaps = 52/499 (10%)

Query: 134 LRPTISYLSPN----ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDW 189
           L   IS +  N    +++LV++A  LAFEAH  QKR SGEP+I HP+ VA IL ++ +D 
Sbjct: 2   LEELISKIKANGNNVDIDLVKKAYDLAFEAHKEQKRESGEPYITHPISVAMILADMGMDT 61

Query: 190 ESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVK 249
            +I AGLLHD +EDT+  T+E I   F   V  +V+G   V+KLGK+K K    S ++ +
Sbjct: 62  NTIVAGLLHDVIEDTDY-TYEDISNIFNVEVANLVDG---VTKLGKIKYK----SKEEQQ 113

Query: 250 ADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGM 309
           AD++R+M LAM +++RVII+KLADRLHNMRTL +M P KQ   A ETL +FAPLA  LG+
Sbjct: 114 ADNVRKMLLAMAKDIRVIIIKLADRLHNMRTLKYMKPEKQKKKAQETLDIFAPLAHRLGI 173

Query: 310 YQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTV 369
            +IK ELE+L   Y + E+Y  +   +A+   E EK +      ++K+++++  LD   +
Sbjct: 174 SKIKWELEDLCLRYIHPEEYYDLVNMIAEKRVEREKFISR----IIKELKEN--LDKANI 227

Query: 370 KTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVL 429
            ++I    K  YSIY+ ++    SI ++  +  +RI            L +  + CY VL
Sbjct: 228 DSDIEGRPKHFYSIYRKMVNKHKSIEQIFDLTAIRI------------LVNTVKDCYAVL 275

Query: 430 GLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERG 489
           G+VH I+ PIP   KDYIA PKPN YQSLHTT+I    ++    E+QIRT EM   AE G
Sbjct: 276 GIVHTIYKPIPGRFKDYIAMPKPNMYQSLHTTVIGSEGKT---FEIQIRTFEMHRTAEYG 332

Query: 490 IAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTS 549
           IAAH+  +  + G              K +   N     +++WL  I EWQ+E V    +
Sbjct: 333 IAAHWKYKSGING-----------TDSKDMTFEN-----KLTWLRDILEWQKEAV---DA 373

Query: 550 REFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVS 609
            EF++    DL    +FVFTP+G + NLP GAT +D+AY IHT+IGNK V AKVNG +V+
Sbjct: 374 TEFMEGFKLDLFSDEIFVFTPKGVVINLPVGATPLDFAYKIHTDIGNKCVGAKVNGKIVT 433

Query: 610 PTHVLANAEVVEIITYNVS 628
             + L   E+VEI+T + S
Sbjct: 434 LDYKLKTGEIVEILTSSSS 452


>gi|338814984|ref|ZP_08626943.1| (p)ppGpp synthetase I, SpoT/RelA [Acetonema longum DSM 6540]
 gi|337273028|gb|EGO61706.1| (p)ppGpp synthetase I, SpoT/RelA [Acetonema longum DSM 6540]
          Length = 736

 Score =  359 bits (921), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 204/491 (41%), Positives = 294/491 (59%), Gaps = 51/491 (10%)

Query: 134 LRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIA 193
           +R    Y     ++L+R+A  +A EAH GQ R SGE +IIHPV VA+IL +L++D  +I+
Sbjct: 15  IRQVQVYQPEMAVDLLRKAYAVACEAHKGQLRVSGEEYIIHPVGVAKILADLQIDATTIS 74

Query: 194 AGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDL 253
           A +LHD VEDT  +T E IE++FG  V  +V+G TK+S++       E  S ++ + ++ 
Sbjct: 75  AAILHDVVEDT-FITLEDIEKKFGKEVAMLVDGVTKLSRI-------EYKSKEEQQLENY 126

Query: 254 RQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIK 313
           R+M LAM +++RV+++KLADRLHNMRTL  MP  KQ  IA ETL+++APLA  LGM  IK
Sbjct: 127 RKMLLAMAKDLRVVLIKLADRLHNMRTLKFMPEVKQKRIARETLEIYAPLAHRLGMSNIK 186

Query: 314 SELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEI 373
            E+E+LSF Y   E Y ++  +V    +E +  ++EA +IL  ++ D      M +K EI
Sbjct: 187 WEMEDLSFRYLEPERYYELVEKVKQKRQERQDIIDEAIRILSDRLAD------MGIKAEI 240

Query: 374 RSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVH 433
           +   K  YSIYK + K    INE+  ++ +R+            L    + CY  LG+VH
Sbjct: 241 QGRPKHFYSIYKKMQKDHKDINEIYDLSAVRV------------LVETVKDCYGALGIVH 288

Query: 434 GIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAH 493
            +W PIP   KDYIA PK N YQSLHTT+I    +    LE+QIRT EM   +E GIAAH
Sbjct: 289 TLWKPIPLRFKDYIAMPKSNMYQSLHTTVIGTRGQP---LEIQIRTWEMHRTSEYGIAAH 345

Query: 494 YSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFV 553
           +  +             G    GK       +   ++SWL  + EWQ++       REFV
Sbjct: 346 WRYK------------EGTKNSGK-------DFDQKLSWLRQLLEWQQDL---RDPREFV 383

Query: 554 DTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHV 613
           +T+  D+    VFVFTP+G++ +LP G+  +D+AY IHT++G++ V A+VNG +V   H 
Sbjct: 384 ETVKLDVFSDEVFVFTPKGDVIDLPAGSVPLDFAYRIHTDVGHRCVGARVNGKIVPLEHK 443

Query: 614 LANAEVVEIIT 624
           LAN ++VEIIT
Sbjct: 444 LANGDIVEIIT 454


>gi|225376526|ref|ZP_03753747.1| hypothetical protein ROSEINA2194_02168 [Roseburia inulinivorans DSM
           16841]
 gi|225211625|gb|EEG93979.1| hypothetical protein ROSEINA2194_02168 [Roseburia inulinivorans DSM
           16841]
          Length = 768

 Score =  359 bits (921), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 209/508 (41%), Positives = 303/508 (59%), Gaps = 57/508 (11%)

Query: 125 DSPERLWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILG 183
           +SPE+L+++L  ++    P+ ++ L+ +A  +A+EAH GQ R+SGEP+IIHP+ VA IL 
Sbjct: 27  ESPEKLYQELIASVRKYHPSTDISLIEKAYNIAYEAHKGQVRKSGEPYIIHPLCVAIILA 86

Query: 184 ELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENH 243
           ELELD E+I AGLLHD VEDT V+T E I++EFGA V  +V+G   V+KLG+L    +  
Sbjct: 87  ELELDKETIVAGLLHDVVEDT-VMTDEEIKQEFGAEVALLVDG---VTKLGQLSYDADKV 142

Query: 244 SVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPL 303
            VQ   A++LR+MFLAM +++RVI++KLADRLHNMRTL +M P KQ   A ET+ ++AP+
Sbjct: 143 EVQ---AENLRKMFLAMAKDIRVILIKLADRLHNMRTLKYMTPEKQKEKARETMDIYAPI 199

Query: 304 AKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQF 363
           A+ LG+ +IK EL++LS  Y   E Y  +  ++A      +  ++   + + K I +   
Sbjct: 200 AQRLGISKIKIELDDLSLKYLEPEAYYDLVHQIAQRKSVRDDYVQSLVEEVKKHIHE--- 256

Query: 364 LDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQ 423
                +  +I    K  +SIYK +     +++++  +  +RII+               +
Sbjct: 257 ---AGIPAQIDGRAKHFFSIYKKMKNQDKTLDQIYDLFAIRIIV------------DSVK 301

Query: 424 ICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIR 478
            CY  LG++H ++ PIP   KDYIA PKPN YQSLHTTLI     PF        E+QIR
Sbjct: 302 DCYAALGVIHEMYKPIPGRFKDYIAMPKPNMYQSLHTTLIGPTGQPF--------EIQIR 353

Query: 479 TEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIRE 538
           T EM   AE GIAAH+  +         A  NG +    TV         ++SWL  I E
Sbjct: 354 TYEMHRTAEYGIAAHWKYK--------EASNNGGAAAPMTVTEEE-----KLSWLRQILE 400

Query: 539 WQEEFVGNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGN 596
           WQ +   N   +EF+  +    DL    VF FTP G++KNLP G+T +D+AY IH+ +GN
Sbjct: 401 WQRDMSDN---KEFMSLLKSDLDLFSDTVFCFTPTGDVKNLPNGSTPIDFAYSIHSAVGN 457

Query: 597 KMVAAKVNGNLVSPTHVLANAEVVEIIT 624
           KM+ AKVNG LV   +V+ N + +E++T
Sbjct: 458 KMIGAKVNGKLVPIDYVIQNGDRIEVLT 485


>gi|261418406|ref|YP_003252088.1| (p)ppGpp synthetase I SpoT/RelA [Geobacillus sp. Y412MC61]
 gi|297529258|ref|YP_003670533.1| (p)ppGpp synthetase I SpoT/RelA [Geobacillus sp. C56-T3]
 gi|319767635|ref|YP_004133136.1| (p)ppGpp synthetase I SpoT/RelA [Geobacillus sp. Y412MC52]
 gi|448238857|ref|YP_007402915.1| GTP pyrophosphokinase [Geobacillus sp. GHH01]
 gi|261374863|gb|ACX77606.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacillus sp. Y412MC61]
 gi|297252510|gb|ADI25956.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacillus sp. C56-T3]
 gi|317112501|gb|ADU94993.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacillus sp. Y412MC52]
 gi|445207699|gb|AGE23164.1| GTP pyrophosphokinase [Geobacillus sp. GHH01]
          Length = 732

 Score =  358 bits (920), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 206/491 (41%), Positives = 298/491 (60%), Gaps = 51/491 (10%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           YLS  ++  +++A   A  AH  Q R+SGEP+IIHP++VA IL +L++D  +IAAG LHD
Sbjct: 19  YLSEQDVAFLKKAYEFAKHAHRDQFRKSGEPYIIHPIQVAGILVDLKMDATTIAAGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            +EDT   T E +E EFGA V  +V+G   V+KLGK+K K    S ++ +A++ R+MFLA
Sbjct: 79  VIEDTEA-TKEDLEREFGAEVAMLVDG---VTKLGKIKYK----SQEEQQAENHRKMFLA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M +++RVI++KLADRLHNMRTL H+P  KQ  IA ETL++FAPLA  LG+ +IK ELE+ 
Sbjct: 131 MAQDIRVILIKLADRLHNMRTLKHLPAEKQRRIANETLEIFAPLAHRLGISKIKWELEDT 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           +  Y N + Y     R+ +L K+   E E+  + +++++ +   L+ + +  EI    K 
Sbjct: 191 ALRYLNPQQYY----RIVNLMKKKRAEREQYLEEVIQEVRER--LNEVHIPCEISGRPKH 244

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIY+ ++      NE+  +  +RII+            +  + CY VLG++H  W P+
Sbjct: 245 IYSIYRKMVMQNKQFNEIYDLLAVRIIV------------NSIKDCYAVLGIIHTCWKPM 292

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PKPN YQSLHTT+I    E    LEVQIRT EM  IAE GIAAH++ +  
Sbjct: 293 PGRFKDYIAMPKPNMYQSLHTTVIGPKGEP---LEVQIRTFEMHQIAEFGIAAHWAYK-- 347

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
                           GKT+  N  +   ++SW   I EWQ +      + EF++++  D
Sbjct: 348 ---------------EGKTIKPN--SFEEKLSWFREILEWQND---ASNAEEFMESLKMD 387

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           L    VFVFTP+G++  LP G+  +D+AY IH+EIGNK + AKVNG +V   + L   ++
Sbjct: 388 LFSDMVFVFTPKGDVIELPAGSVPIDFAYRIHSEIGNKTIGAKVNGKMVPLDYKLQTGDI 447

Query: 620 VEIITYNVSFS 630
           VEI+T N S+ 
Sbjct: 448 VEILTSNHSYG 458


>gi|138896146|ref|YP_001126599.1| ppGpp synthetase/hydrolase Rel [Geobacillus thermodenitrificans
           NG80-2]
 gi|134267659|gb|ABO67854.1| ppGpp synthetase/hydrolase Rel [Geobacillus thermodenitrificans
           NG80-2]
          Length = 732

 Score =  358 bits (920), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 207/491 (42%), Positives = 297/491 (60%), Gaps = 51/491 (10%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           YLS  ++  +++A   A  AH  Q R+SGEP+IIHP++VA IL +L++D  +IAAG LHD
Sbjct: 19  YLSEQDVAFLKKAYEFAKHAHRDQFRKSGEPYIIHPIQVAGILADLKMDATTIAAGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            VEDT   T E +E EFGA V  +V+G   V+KLGK+K K    S ++ +A++ R+MFLA
Sbjct: 79  VVEDTEA-TKEDLEREFGADVAMLVDG---VTKLGKIKYK----SQEEQQAENHRKMFLA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M +++RVI++KLADRLHNMRTL H+P  KQ  IA ETL++FAPLA  LG+ +IK ELE+ 
Sbjct: 131 MAQDIRVILIKLADRLHNMRTLKHLPAEKQRRIANETLEIFAPLAHRLGISKIKWELEDT 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           +  Y N + Y     R+ +L K+   E E+  + +++++ +   L+ + +  EI    K 
Sbjct: 191 ALRYLNPQQYY----RIVNLMKKKRAEREQYLEEVIQEVRER--LNEVHIPCEISGRPKH 244

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIY+ ++      NE+  +  +RII+            +  + CY VLG++H  W P+
Sbjct: 245 IYSIYRKMVMQNKQFNEIYDLLAVRIIV------------NSIKDCYAVLGIIHTCWKPM 292

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PKPN YQSLHTT+I    E    LEVQIRT EM  IAE GIAAH++ +  
Sbjct: 293 PGRFKDYIAMPKPNMYQSLHTTVIGPKGEP---LEVQIRTFEMHQIAEFGIAAHWAYK-- 347

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
                           GKTV  N  +   ++SW   I EWQ +      + EF++++  D
Sbjct: 348 ---------------EGKTVKPN--SFEEKLSWFREILEWQND---ASNAEEFMESLKMD 387

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           L    VFVFTP+G++  LP G+  +D+AY IH+EIGNK + AKVNG +V   + L   ++
Sbjct: 388 LFSDMVFVFTPKGDVIELPAGSVPIDFAYRIHSEIGNKTIGAKVNGKMVPLDYKLQTGDI 447

Query: 620 VEIITYNVSFS 630
           VEI+T   S+ 
Sbjct: 448 VEILTSKHSYG 458


>gi|239827847|ref|YP_002950471.1| (p)ppGpp synthetase I SpoT/RelA [Geobacillus sp. WCH70]
 gi|239808140|gb|ACS25205.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacillus sp. WCH70]
          Length = 732

 Score =  358 bits (920), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 206/490 (42%), Positives = 299/490 (61%), Gaps = 51/490 (10%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           YLS  ++E +++A   A  AH  Q R+SGEP+IIHP++VA IL +L++D  +IAAG LHD
Sbjct: 19  YLSERDVEFIKKAYEFANHAHRDQYRKSGEPYIIHPIQVAGILVDLKMDPATIAAGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            VEDT   T E +E EFG+ V  +V+G   V+KLGK+K K    S ++ +A++ R+MFLA
Sbjct: 79  VVEDTEA-TKEDLEREFGSEVAMLVDG---VTKLGKIKYK----SQEEQQAENHRKMFLA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M +++RVI++KLADRLHNMRTL H+P  KQ  IA ETL++FAPLA  LG+ +IK ELE+ 
Sbjct: 131 MAQDIRVILIKLADRLHNMRTLKHLPIEKQRRIANETLEIFAPLAHRLGISKIKWELEDT 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           +  Y N + Y     R+ +L K+   E E+  + +++++ +   L+ +++  EI    K 
Sbjct: 191 ALRYLNPQQYY----RIVNLMKKKRAEREQYLEEVIQEVRER--LNEVSIPCEISGRPKH 244

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIY+ ++      NE+  +  +RII+            +  + CY VLG++H  W P+
Sbjct: 245 IYSIYRKMVMQNKQFNEIYDLLAVRIIV------------NSIKDCYAVLGIIHTCWKPM 292

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PKPN YQSLHTT+I    E    LEVQIRT EM  IAE GIAAH++ +  
Sbjct: 293 PGRFKDYIAMPKPNMYQSLHTTVIGPKGEP---LEVQIRTFEMHQIAEFGIAAHWAYK-- 347

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
                           GKT+  N  +   ++SW   I EWQ +      + EF++++  D
Sbjct: 348 ---------------EGKTIKPN--SFEEKLSWFREILEWQND---ASNAEEFMESLKMD 387

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           L    VFVFTP+G++  LP G+  +D+AY IH+EIGNK + AKVNG +V   + L   ++
Sbjct: 388 LFSDMVFVFTPKGDVIELPAGSVPIDFAYRIHSEIGNKTIGAKVNGKMVPLDYKLQTGDI 447

Query: 620 VEIITYNVSF 629
           VEI+T   S+
Sbjct: 448 VEILTSKHSY 457


>gi|56421113|ref|YP_148431.1| GTP pyrophosphokinase [Geobacillus kaustophilus HTA426]
 gi|375009672|ref|YP_004983305.1| GTP pyrophosphokinase [Geobacillus thermoleovorans CCB_US3_UF5]
 gi|56380955|dbj|BAD76863.1| GTP pyrophosphokinase (ppGpp synthetase) [Geobacillus kaustophilus
           HTA426]
 gi|359288521|gb|AEV20205.1| GTP pyrophosphokinase [Geobacillus thermoleovorans CCB_US3_UF5]
          Length = 732

 Score =  358 bits (920), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 206/491 (41%), Positives = 298/491 (60%), Gaps = 51/491 (10%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           YLS  ++  +++A   A  AH  Q R+SGEP+IIHP++VA IL +L++D  +IAAG LHD
Sbjct: 19  YLSEQDVAFLKKAYEFAKHAHRDQFRKSGEPYIIHPIQVAGILVDLKMDATTIAAGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            +EDT   T E +E EFGA V  +V+G   V+KLGK+K K    S ++ +A++ R+MFLA
Sbjct: 79  VIEDTEA-TKEDLEREFGAEVAMLVDG---VTKLGKIKYK----SQEEQQAENHRKMFLA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M +++RVI++KLADRLHNMRTL H+P  KQ  IA ETL++FAPLA  LG+ +IK ELE+ 
Sbjct: 131 MAQDIRVILIKLADRLHNMRTLKHLPAEKQRRIANETLEIFAPLAHRLGISKIKWELEDT 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           +  Y N + Y     R+ +L K+   E E+  + +++++ +   L+ + +  EI    K 
Sbjct: 191 ALRYLNPQQYY----RIVNLMKKKRAEREQYLEEVIQEVRER--LNEVHIPCEISGRPKH 244

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIY+ ++      NE+  +  +RII+            +  + CY VLG++H  W P+
Sbjct: 245 IYSIYRKMVMQNKQFNEIYDLLAVRIIV------------NSIKDCYAVLGIIHTCWKPM 292

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PKPN YQSLHTT+I    E    LEVQIRT EM  IAE GIAAH++ +  
Sbjct: 293 PGRFKDYIAMPKPNMYQSLHTTVIGPKGEP---LEVQIRTFEMHQIAEFGIAAHWAYK-- 347

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
                           GKT+  N  +   ++SW   I EWQ +      + EF++++  D
Sbjct: 348 ---------------EGKTIKPN--SFEEKLSWFREILEWQND---ASNAEEFMESLKMD 387

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           L    VFVFTP+G++  LP G+  +D+AY IH+EIGNK + AKVNG +V   + L   ++
Sbjct: 388 LFSDMVFVFTPKGDVIELPAGSVPIDFAYRIHSEIGNKTIGAKVNGKMVPLDYKLQTGDI 447

Query: 620 VEIITYNVSFS 630
           VEI+T N S+ 
Sbjct: 448 VEILTSNHSYG 458


>gi|302670706|ref|YP_003830666.1| RelA/SpoT family protein [Butyrivibrio proteoclasticus B316]
 gi|302395179|gb|ADL34084.1| RelA/SpoT family protein [Butyrivibrio proteoclasticus B316]
          Length = 760

 Score =  358 bits (919), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 204/504 (40%), Positives = 304/504 (60%), Gaps = 48/504 (9%)

Query: 126 SPERLWEDLRPTISYLSP-NELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
           +P+ L+E L   +    P +++ L+ +A   A EAH GQ R+SGEP+IIHP+ VA IL +
Sbjct: 18  TPDTLYEGLIKRVRKYHPSDDISLIEKAYNQAAEAHQGQLRKSGEPYIIHPLCVAIILAD 77

Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
           LE+D E+IAAGLLHD VEDT + T E I+E FGA V  +V+G TK++ L +L   N N +
Sbjct: 78  LEMDKETIAAGLLHDVVEDT-ICTKEEIQESFGADVALLVDGVTKLTAL-QLSTDNTNKT 135

Query: 245 VQ--DVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAP 302
            +  D++A +LR+MFLAM +++RVI++KLADRLHNMRTL+HMPP KQ  IA ETL +++P
Sbjct: 136 QEQIDMQAQNLRKMFLAMAKDIRVILIKLADRLHNMRTLAHMPPEKQQRIAQETLDIYSP 195

Query: 303 LAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQ 362
           +A  LG+ +IK EL++LS  Y   + Y  +  +V+    E EK +E+    + + + D  
Sbjct: 196 IAGRLGISRIKVELDDLSLKYLKPDVYYDLVDKVSIRKSEREKYVED----ICENVRD-- 249

Query: 363 FLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQ 422
            +    ++ E+    K  +SIYK +     +++++  +  +RII+            +  
Sbjct: 250 AIKTAGIEGEVNGRVKHFFSIYKKMRNQNKTLDQIYDLFAIRIIV------------ATV 297

Query: 423 QICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEM 482
           + CY  LG++H ++ PIP   KDYIA PKPN YQSLHTTLI    ++    E+QIRT +M
Sbjct: 298 KDCYAALGVIHEMYKPIPGRFKDYIAMPKPNMYQSLHTTLIG---QTGQPFEIQIRTYDM 354

Query: 483 DLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEE 542
              AE GIAAH+    +     G    NG                 +++WL  I EWQ++
Sbjct: 355 HKAAEYGIAAHWK---YKETSDGKKAENGEEE--------------KLTWLRQILEWQQD 397

Query: 543 FVGNMTSREFVDTITRD--LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVA 600
              N   +EF++ +  D  L    V+ FTP GE+KNLP G+T +D+AY +H+ +GNKM+ 
Sbjct: 398 MSDN---QEFMNLLKSDLNLFSDDVYCFTPTGEVKNLPAGSTPIDFAYSVHSAVGNKMIG 454

Query: 601 AKVNGNLVSPTHVLANAEVVEIIT 624
           AKVNG LV   + + N + +EI+T
Sbjct: 455 AKVNGKLVPIDYKIQNGDRIEIVT 478


>gi|196250100|ref|ZP_03148794.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacillus sp. G11MC16]
 gi|196210284|gb|EDY05049.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacillus sp. G11MC16]
          Length = 732

 Score =  358 bits (919), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 206/491 (41%), Positives = 298/491 (60%), Gaps = 51/491 (10%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           YLS  ++  +++A   A +AH  Q R+SGEP+IIHP++VA IL +L++D  +IAAG LHD
Sbjct: 19  YLSEQDVAFLKKAYEFAKQAHRDQFRKSGEPYIIHPIQVAGILADLKMDATTIAAGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            VEDT   T E +E EFGA V  +V+G   V+KLGK+K K    S ++ +A++ R+MFLA
Sbjct: 79  VVEDTEA-TKEDLEREFGADVAMLVDG---VTKLGKIKYK----SQEEQQAENHRKMFLA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M +++RVI++KLADRLHNMRTL H+P  KQ  IA ETL++FAPLA  LG+ +IK ELE+ 
Sbjct: 131 MAQDIRVILIKLADRLHNMRTLKHLPAEKQRRIANETLEIFAPLAHRLGISKIKWELEDT 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           +  Y N + Y     R+ +L K+   E E+  + +++++ +   L+ + +  EI    K 
Sbjct: 191 ALRYLNPQQYY----RIVNLMKKKRAEREQYLEEVIQEVRER--LNEVHIPCEISGRPKH 244

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIY+ ++      NE+  +  +RII+            +  + CY VLG++H  W P+
Sbjct: 245 IYSIYRKMVMQNKQFNEIYDLLAVRIIV------------NSIKDCYAVLGIIHTCWKPM 292

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PKPN YQSLHTT+I    E    LEVQIRT EM  IAE GIAAH++ +  
Sbjct: 293 PGRFKDYIAMPKPNMYQSLHTTVIGPKGEP---LEVQIRTFEMHQIAEFGIAAHWAYK-- 347

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
                           GKTV  N  +   ++SW   I +WQ +      + EF++++  D
Sbjct: 348 ---------------EGKTVKPN--SFEEKLSWFREILDWQND---ASNAEEFMESLKMD 387

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           L    VFVFTP+G++  LP G+  +D+AY IH+EIGNK + AKVNG +V   + L   ++
Sbjct: 388 LFSDMVFVFTPKGDVIELPAGSVPIDFAYRIHSEIGNKTIGAKVNGKMVPLDYKLQTGDI 447

Query: 620 VEIITYNVSFS 630
           VEI+T   S+ 
Sbjct: 448 VEILTSKHSYG 458


>gi|352684036|ref|YP_004896020.1| GTP pyrophosphokinase [Acidaminococcus intestini RyC-MR95]
 gi|350278690|gb|AEQ21880.1| GTP pyrophosphokinase [Acidaminococcus intestini RyC-MR95]
          Length = 740

 Score =  358 bits (919), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 206/489 (42%), Positives = 293/489 (59%), Gaps = 46/489 (9%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           YL+P ++E VR A   A E H  QKR SGEP+IIHP+ VA IL +L +D  ++AA  LHD
Sbjct: 21  YLTPRQVEFVREAYNFAAEQHASQKRASGEPYIIHPLGVASILAQLHMDDTTLAAAFLHD 80

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            VEDT+V T +++ + FG  V  +V+G   V+KLGK+    E  S ++ + ++ R+MFLA
Sbjct: 81  VVEDTDV-TLDQLTDIFGLEVAGLVDG---VTKLGKI----EYISREEQQVENYRKMFLA 132

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M +++RV+++KLADRLHNMRT+ +MPP+KQ  I++ETL+++APLA  LG+Y IK ELE+L
Sbjct: 133 MAKDIRVVLIKLADRLHNMRTMKYMPPNKQKRISSETLEIYAPLAHRLGIYAIKWELEDL 192

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           SF Y   + Y ++  +V     E E  ++EA   L     D        +K EI+   K 
Sbjct: 193 SFRYMEPQHYYELVEQVKVKRHEREAMVQEAMDELSHLCSDS------GIKCEIQGRPKS 246

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIYK + K   SINE+  +  +R+            L    + CY VLG+VHG W PI
Sbjct: 247 FYSIYKKMQKDNKSINEIYDLLAVRV------------LVDSVKDCYGVLGIVHGKWRPI 294

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK NGYQSLHTT++     S   LE+QIRT EM  I+E G+AAH+  R  
Sbjct: 295 PGRFKDYIAVPKSNGYQSLHTTVVS---SSGQPLEIQIRTFEMHRISEYGVAAHW--RYK 349

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
            +G  G   P+           ++ +   +++WL  + +W  +        EFVDT+  D
Sbjct: 350 ESG--GSNMPSS----------SDKSADEKMAWLRQLLDWHRDM---RDPHEFVDTVKMD 394

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           +    VFVFTP G++ +LP G+  +D+AY IHT +GN+ V AK+NG +V   + L N ++
Sbjct: 395 VFSDEVFVFTPPGDVIDLPFGSVPIDFAYRIHTGVGNRCVGAKINGKIVPLDYKLKNGDI 454

Query: 620 VEIITYNVS 628
           VEIIT   S
Sbjct: 455 VEIITSKTS 463


>gi|295091158|emb|CBK77265.1| (p)ppGpp synthetase, RelA/SpoT family [Clostridium cf.
           saccharolyticum K10]
          Length = 761

 Score =  358 bits (918), Expect = 6e-96,   Method: Compositional matrix adjust.
 Identities = 209/509 (41%), Positives = 311/509 (61%), Gaps = 65/509 (12%)

Query: 126 SPERLWEDLRPTISYLSP-NELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
           SPE L++DL  +I    P +++ +V +A  LAFEAH  QKR+SGEP+IIHP+ VA IL +
Sbjct: 22  SPEELYQDLIASIQRYHPSDDISMVEKAYRLAFEAHKDQKRKSGEPYIIHPLCVAIILAD 81

Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
           LELD E+I AG+LHD VEDT V+T + +  EFGA V  +V+G TK++ +   K K E   
Sbjct: 82  LELDKETIVAGILHDVVEDT-VMTTDGLAREFGAEVALLVDGVTKLTNISWDKDKVE--- 137

Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
              ++A++LR+MFLAM +++RVI+VKLADRLHNMRTL +M P KQ   A ET+ ++AP+A
Sbjct: 138 ---MQAENLRKMFLAMAKDIRVILVKLADRLHNMRTLQYMKPEKQREKARETMDIYAPIA 194

Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDD--Q 362
             LG+ +IK+EL++L+  Y   E Y ++  +++ L K       +A +  +K I D+   
Sbjct: 195 DRLGISRIKTELDDLALKYLEPEVYYELSEKIS-LRK-------DAREAFVKGIVDEVKS 246

Query: 363 FLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQ 422
            +D   ++ ++    K  +SIYK ++K   +++++  +  +RII+               
Sbjct: 247 HMDDAGIECKVDGRVKHFFSIYKKMVKQNKTLDQIYDLFAVRIIV------------DTV 294

Query: 423 QICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQI 477
           + CY  LG++H ++ PIP   KDYIA PK N YQSLHTTLI     PF        E+QI
Sbjct: 295 KDCYAALGVIHELYKPIPGRFKDYIAMPKINNYQSLHTTLIGSSGQPF--------EIQI 346

Query: 478 RTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIR 537
           RT EM  +AE GIAAH+             + +G +       +++A    ++SWL  I 
Sbjct: 347 RTYEMHRVAEYGIAAHWK-----------YKESGST----KAAMDSAE--EKLSWLRQIL 389

Query: 538 EWQEEFVGNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIG 595
           EWQ++   N   +EF+D++    DL    VF FTP G++KNLP G+T +D+AY IH+ +G
Sbjct: 390 EWQKDMSDN---KEFLDSLKSDLDLFSDSVFCFTPSGDVKNLPSGSTPIDFAYSIHSAVG 446

Query: 596 NKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
           NKMV AKVNG LV+  + + N + +EI+T
Sbjct: 447 NKMVGAKVNGMLVNIDYEIKNGDRIEILT 475


>gi|240143890|ref|ZP_04742491.1| GTP diphosphokinase [Roseburia intestinalis L1-82]
 gi|257204082|gb|EEV02367.1| GTP diphosphokinase [Roseburia intestinalis L1-82]
          Length = 774

 Score =  358 bits (918), Expect = 6e-96,   Method: Compositional matrix adjust.
 Identities = 207/508 (40%), Positives = 307/508 (60%), Gaps = 57/508 (11%)

Query: 125 DSPERLWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILG 183
           +SPE+L+++L  ++    P+ ++ L+ +A  +A +AH+GQ R+SGEP+IIHP+ VA IL 
Sbjct: 33  ESPEKLYDELIASVRKYHPSTDISLIEKAYHVARDAHEGQARKSGEPYIIHPLCVAIILA 92

Query: 184 ELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENH 243
           ELELD E+I AGLLHD VEDT V+T E+I +EFG  V  +V+G   V+KLG+L    +  
Sbjct: 93  ELELDKETIVAGLLHDVVEDT-VMTDEQIAQEFGDEVALLVDG---VTKLGQLSYDADKV 148

Query: 244 SVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPL 303
            VQ   A++LR+MFLAM +++RVI++KLADRLHNMRTL +M P KQ   A ET+ ++AP+
Sbjct: 149 EVQ---AENLRKMFLAMAKDIRVILIKLADRLHNMRTLKYMTPEKQKEKARETMDIYAPI 205

Query: 304 AKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQF 363
           A+ LG+ +IK EL++LS  Y   + Y  +  ++A      ++ +++  + + + I+D   
Sbjct: 206 AQRLGISKIKIELDDLSLKYLEPDAYYDLVHQIAQRKSVRDEYVQKLVEEVRQHIKD--- 262

Query: 364 LDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQ 423
                +  ++    K  +SIYK ++    +++++  +  +RII+               +
Sbjct: 263 ---AGIPAQVDGRAKHFFSIYKKMVNQHKTLDQIYDLFAIRIIV------------DSVK 307

Query: 424 ICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIR 478
            CY  LG++H ++ PIP   KDYIA PKPN YQSLHTTLI     PF        E+QIR
Sbjct: 308 DCYAALGVIHEMYKPIPGRFKDYIAMPKPNMYQSLHTTLIGPTGQPF--------EIQIR 359

Query: 479 TEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIRE 538
           T EM   AE GIAAH+  +         A  NG   +  TV         ++SWL  I E
Sbjct: 360 TFEMHRTAEYGIAAHWKYK--------EASNNGGVSQPMTVTEEE-----KLSWLRQILE 406

Query: 539 WQEEFVGNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGN 596
           WQ +   N   +EF+  + R  DL    VF FTP G++KNLP G+T +D+AY IH+ +GN
Sbjct: 407 WQRDMSDN---KEFMSLLKRDLDLFSDTVFCFTPTGDVKNLPTGSTPIDFAYSIHSAVGN 463

Query: 597 KMVAAKVNGNLVSPTHVLANAEVVEIIT 624
           KM+ AKVNG LV   +++ N + VE+IT
Sbjct: 464 KMIGAKVNGKLVPIDYIIQNGDRVEVIT 491


>gi|78044718|ref|YP_361036.1| GTP pyrophosphokinase [Carboxydothermus hydrogenoformans Z-2901]
 gi|77996833|gb|ABB15732.1| GTP pyrophosphokinase [Carboxydothermus hydrogenoformans Z-2901]
          Length = 716

 Score =  358 bits (918), Expect = 6e-96,   Method: Compositional matrix adjust.
 Identities = 203/491 (41%), Positives = 295/491 (60%), Gaps = 52/491 (10%)

Query: 134 LRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIA 193
           L+   +Y +  + EL+++A   A EAH GQKR SGE +I HP+ VA IL  L++D E+IA
Sbjct: 8   LKKIKNYNNNMDEELIKKAYNFAAEAHAGQKRASGEDYITHPLAVAFILAGLQMDDETIA 67

Query: 194 AGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDL 253
           AGLLHD VEDT   T E I  EFG  V  +V+G   V+KL +++ KN+    ++ + ++L
Sbjct: 68  AGLLHDVVEDT-AYTIEDIAREFGEEVANLVDG---VTKLSRIEFKNK----EEQQVENL 119

Query: 254 RQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIK 313
           R+MFLAM +++RVI++KLADRLHNMRTL +  P KQ  IA ETL++FAPLA  LG+Y+IK
Sbjct: 120 RKMFLAMAKDIRVILIKLADRLHNMRTLKYHNPEKQKEIARETLEIFAPLAHRLGIYRIK 179

Query: 314 SELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEI 373
            ELE+L+F Y + ++Y  +  ++A    + E+ +++   IL +K++         +K +I
Sbjct: 180 WELEDLAFRYLDPDNYYDIVEKIAKTRAKREQYIQQVISILEEKLKS------YNIKAKI 233

Query: 374 RSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVH 433
               K  YSI++ + + +   +EV  +  +R+I++              + CY VLG++H
Sbjct: 234 EGRPKHLYSIFQKMREQQKDFSEVYDVMAVRVIVE------------SVRDCYTVLGIIH 281

Query: 434 GIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAH 493
            +W P+P   KDYIA PK N YQSLHTT+I    E    LE+QIRT EM   AE GIAAH
Sbjct: 282 TMWIPVPGRFKDYIAMPKSNMYQSLHTTVIGPFGEP---LEIQIRTFEMHRTAEYGIAAH 338

Query: 494 YSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFV 553
           +                    R K     +     ++SWL  I EWQ E      +REF+
Sbjct: 339 W--------------------RYKEGGKGDKKFDEKLSWLRQILEWQREL---KDAREFM 375

Query: 554 DTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHV 613
           +T+  D+    VFVFTP+G++  LP G+  +D+AY IHT++GN+ V AKVNG LV   + 
Sbjct: 376 ETLKVDIFSDSVFVFTPKGDVVELPAGSVPIDFAYRIHTDVGNRCVGAKVNGRLVPLDYQ 435

Query: 614 LANAEVVEIIT 624
           L N ++VEIIT
Sbjct: 436 LKNGDIVEIIT 446


>gi|297616954|ref|YP_003702113.1| (p)ppGpp synthetase I SpoT/RelA [Syntrophothermus lipocalidus DSM
           12680]
 gi|297144791|gb|ADI01548.1| (p)ppGpp synthetase I, SpoT/RelA [Syntrophothermus lipocalidus DSM
           12680]
          Length = 724

 Score =  358 bits (918), Expect = 7e-96,   Method: Compositional matrix adjust.
 Identities = 209/495 (42%), Positives = 295/495 (59%), Gaps = 62/495 (12%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
            Y SP ++  + RA   A +AH GQ R SGEP++ HP+ VA IL ELELD  ++ A LLH
Sbjct: 12  KYHSPEDITEIERAYAFAEKAHAGQTRISGEPYVCHPLAVAIILAELELDAATLIAALLH 71

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT V T E ++ +FG  V  +V+G   V+KLGKL    E  S ++ +A++LR+MFL
Sbjct: 72  DVVEDTEV-TLEEVKLQFGEEVALLVDG---VTKLGKL----EFMSKEEAQAENLRKMFL 123

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM +++RV+I+KLADRLHNMRTL + P  KQ  IA ETL++F PLA  LG+++ K ELE+
Sbjct: 124 AMAKDIRVLIIKLADRLHNMRTLVYQPERKQVEIAEETLEIFVPLAHRLGIFRFKWELED 183

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
           LSF+Y   + Y ++ RR+    KE E+ + E    L+ +I  +  L  + ++ +I    K
Sbjct: 184 LSFLYLEPDTYYELARRLKAKRKEREEYVHE----LIARIRAE--LQKIGIEADIAGRPK 237

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIY  +LK    ++E+     +R+            L    + CY VLG++H +W P
Sbjct: 238 NLYSIYTKMLKQGKDLDEIYDKIAIRV------------LVDTVRDCYGVLGIIHTLWKP 285

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMDLIAERGIAAH 493
           +P   KDYIA PKPN YQSLHTTLI     PF        EVQIRT EM   AE GIAAH
Sbjct: 286 LPGRFKDYIAMPKPNMYQSLHTTLIGRGGEPF--------EVQIRTWEMHRTAEYGIAAH 337

Query: 494 YSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFV 553
           +                 R   GKT     +++  +++WL  + EWQ+E      +REF+
Sbjct: 338 W-----------------RYKEGKT---KTSDLDEKLAWLRQMLEWQQEV---KDTREFM 374

Query: 554 DTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHV 613
           +++  DL    VFVFTP+G++  LP+G+  VD+AY +HTE+G++ V AKVNG +V   H 
Sbjct: 375 ESLRIDLFADTVFVFTPKGDVVELPRGSCPVDFAYRVHTEVGHRCVGAKVNGRIVPLDHQ 434

Query: 614 LANAEVVEIITYNVS 628
           L N ++V+IIT   S
Sbjct: 435 LNNGDIVQIITSKQS 449


>gi|10443847|gb|AAG17607.1|AF242653_1 ppGpp synthetase/hydrolase Rel [Geobacillus stearothermophilus ATCC
           7953]
          Length = 732

 Score =  357 bits (917), Expect = 7e-96,   Method: Compositional matrix adjust.
 Identities = 206/491 (41%), Positives = 297/491 (60%), Gaps = 51/491 (10%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           YLS  ++  +++A   A  AH  Q R+SGEP+IIHP++VA IL +L++D  +IAAG LHD
Sbjct: 19  YLSEQDVAFLKKAYEFAKHAHRDQFRKSGEPYIIHPIQVAGILVDLKMDATTIAAGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            +EDT   T E +E EFGA V  +V+G   V+KLGK+K K    S ++ +A++ R+MFLA
Sbjct: 79  VIEDTEA-TKEDLEREFGAEVAMLVDG---VTKLGKIKYK----SQEEQQAENHRKMFLA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M +++RVI++KLADRLHNMRTL H+P  KQ  IA ETL++FAPLA  LG+ +IK ELE+ 
Sbjct: 131 MAQDIRVILIKLADRLHNMRTLKHLPAEKQRRIANETLEIFAPLAHRLGISKIKWELEDT 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           +  Y N + Y     R+ +L K+   E E+  + +++++ +   L+ + +  EI    K 
Sbjct: 191 ALRYLNPQQYY----RIVNLMKKKRAEREQYLEEVIQEVRER--LNEVHIPCEISGRPKH 244

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIY+ ++      NE+  +  +RII+            +  + CY VLG++H  W P+
Sbjct: 245 IYSIYRKMVMQNKQFNEIYDLLAVRIIV------------NSIKDCYAVLGIIHTCWKPM 292

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PKPN YQSLHTT+I    E    LEVQIRT EM  IAE GIAAH++ +  
Sbjct: 293 PGRFKDYIAMPKPNMYQSLHTTVIGPKGEP---LEVQIRTFEMHQIAEFGIAAHWAYK-- 347

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
                           GKT+  N  +   ++SW   I EWQ +      + EF++++  D
Sbjct: 348 ---------------EGKTIKPN--SFEEKLSWFREILEWQND---ASNAEEFMESLKMD 387

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           L    VFVFTP+GE+  LP G+  +D+AY IH+EIGNK + AKVNG +V   + L   ++
Sbjct: 388 LFSDMVFVFTPKGEVIELPAGSVPIDFAYRIHSEIGNKTIGAKVNGKIVPLDYKLQTGDI 447

Query: 620 VEIITYNVSFS 630
           VEI+T   S+ 
Sbjct: 448 VEILTSKHSYG 458


>gi|269926113|ref|YP_003322736.1| (p)ppGpp synthetase I SpoT/RelA [Thermobaculum terrenum ATCC
           BAA-798]
 gi|269789773|gb|ACZ41914.1| (p)ppGpp synthetase I, SpoT/RelA [Thermobaculum terrenum ATCC
           BAA-798]
          Length = 721

 Score =  357 bits (917), Expect = 9e-96,   Method: Compositional matrix adjust.
 Identities = 206/494 (41%), Positives = 294/494 (59%), Gaps = 45/494 (9%)

Query: 131 WEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWE 190
           WE L    +YLS  + +L+RRA  +A +AH+G+ R+SGEPFI HPV VA IL +L+ D +
Sbjct: 4   WETLDKGTNYLSSLDKDLIRRAYEVADKAHEGEYRKSGEPFISHPVNVALILADLKQDAQ 63

Query: 191 SIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKA 250
           +IA+ LLHDTVEDTN+ T + IE  FG  V R+V+G TK++K+       ++   Q  +A
Sbjct: 64  AIASALLHDTVEDTNL-TLDDIETIFGPEVSRLVDGLTKLNKIRLSPDDEKDPKEQQAQA 122

Query: 251 DDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMY 310
           ++LR+MFLAM E+ RV+++KLADRLHNMRT+ H+P  KQ S A ETL+++APLA  LG++
Sbjct: 123 ENLRKMFLAMVEDPRVVLIKLADRLHNMRTIEHLPRDKQLSKARETLEIYAPLAGRLGIF 182

Query: 311 QIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVK 370
           + +SELE+LSF     + Y ++  +V        K +E+A  +L K       LD   + 
Sbjct: 183 KFRSELEDLSFKVLYPDKYREIAAQVERSGVTRGKYIEQAIDVLKKA------LDAEGIP 236

Query: 371 TEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLG 430
            EI    K  YSIY+ + + + S +++  +  LR+I                  CY  LG
Sbjct: 237 AEITGRRKHLYSIYRKMEQKQRSFDQIFDVLGLRVI------------TDEVMQCYAALG 284

Query: 431 LVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGI 490
           ++H IW PIP    DYIA PK + YQSLHT ++    +    LE+QIRT +M  +AE GI
Sbjct: 285 VIHSIWRPIPGEFDDYIAMPKESMYQSLHTAVVGLDGKP---LEIQIRTRDMHEVAEYGI 341

Query: 491 AAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSR 550
           AAH+                 R   GK     N     RI+WL  + EW++E      ++
Sbjct: 342 AAHW-----------------RYKEGKKA---NEAAEHRITWLRQLLEWRDEVA---DAQ 378

Query: 551 EFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSP 610
           EFV+++  DLL   ++VFTP G++  LP+GAT +D+AY IHTEIG+  V A VNG LVS 
Sbjct: 379 EFVESMKSDLLQEHIYVFTPNGDVVELPRGATPIDFAYRIHTEIGHHCVGATVNGRLVSL 438

Query: 611 THVLANAEVVEIIT 624
            +VL N +VV+I T
Sbjct: 439 DYVLQNGDVVKIRT 452


>gi|283795474|ref|ZP_06344627.1| GTP diphosphokinase [Clostridium sp. M62/1]
 gi|291077138|gb|EFE14502.1| RelA/SpoT family protein [Clostridium sp. M62/1]
          Length = 761

 Score =  357 bits (916), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 209/509 (41%), Positives = 311/509 (61%), Gaps = 65/509 (12%)

Query: 126 SPERLWEDLRPTISYLSP-NELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
           SPE L++DL  +I    P +++ +V +A  LAFEAH  QKR+SGEP+IIHP+ VA IL +
Sbjct: 22  SPEELYQDLIVSIQRYHPSDDISMVEKAYRLAFEAHKDQKRKSGEPYIIHPLCVAIILAD 81

Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
           LELD E+I AG+LHD VEDT V+T + +  EFGA V  +V+G TK++ +   K K E   
Sbjct: 82  LELDKETIVAGILHDVVEDT-VMTTDGLAREFGAEVALLVDGVTKLTNISWDKDKVE--- 137

Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
              ++A++LR+MFLAM +++RVI+VKLADRLHNMRTL +M P KQ   A ET+ ++AP+A
Sbjct: 138 ---MQAENLRKMFLAMAKDIRVILVKLADRLHNMRTLQYMKPEKQREKARETMDIYAPIA 194

Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDD--Q 362
             LG+ +IK+EL++L+  Y   E Y ++  +++ L K       +A +  +K I D+   
Sbjct: 195 DRLGISRIKTELDDLALKYLEPEVYYELSEKIS-LRK-------DAREAFVKGIVDEVKS 246

Query: 363 FLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQ 422
            +D   ++ ++    K  +SIYK ++K   +++++  +  +RII+               
Sbjct: 247 HMDDAGIECKVDGRVKHFFSIYKKMVKQNKTLDQIYDLFAVRIIV------------DTV 294

Query: 423 QICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQI 477
           + CY  LG++H ++ PIP   KDYIA PK N YQSLHTTLI     PF        E+QI
Sbjct: 295 KDCYAALGVIHELYKPIPGRFKDYIAMPKINNYQSLHTTLIGSSGQPF--------EIQI 346

Query: 478 RTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIR 537
           RT EM  +AE GIAAH+             + +G +       +++A    ++SWL  I 
Sbjct: 347 RTYEMHRVAEYGIAAHWK-----------YKESGST----KAAMDSAE--EKLSWLRQIL 389

Query: 538 EWQEEFVGNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIG 595
           EWQ++   N   +EF+D++    DL    VF FTP G++KNLP G+T +D+AY IH+ +G
Sbjct: 390 EWQKDMSDN---KEFLDSLKSDLDLFSDSVFCFTPSGDVKNLPSGSTPIDFAYSIHSAVG 446

Query: 596 NKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
           NKMV AKVNG LV+  + + N + +EI+T
Sbjct: 447 NKMVGAKVNGMLVNIDYEIKNGDRIEILT 475


>gi|253578285|ref|ZP_04855557.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251850603|gb|EES78561.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 776

 Score =  357 bits (916), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 207/507 (40%), Positives = 303/507 (59%), Gaps = 60/507 (11%)

Query: 126 SPERLWEDL-RPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
           SPE L+++L    + Y    ++ ++ +A  +A EAH+GQKR+SGEP+IIHP+ VA IL +
Sbjct: 40  SPEVLYKELINSVLKYHPSTDISMIEKAYKVASEAHEGQKRKSGEPYIIHPLCVAIILAD 99

Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
           LELD E+I AGLLHD VEDT  +T+E +E+EFG+ V  +V+G   V+KLG+L    +   
Sbjct: 100 LELDKETIVAGLLHDAVEDT-WMTYEEVEKEFGSEVALLVDG---VTKLGQLSYSADKVE 155

Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
           VQ   A++LR+MFLAM +++RVI++KLADRLHNMRTL +M P KQ   A ET+ ++AP+A
Sbjct: 156 VQ---AENLRKMFLAMAKDIRVILIKLADRLHNMRTLQYMRPEKQQEKARETMDIYAPIA 212

Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
             LG+ +IK EL++LS  Y   + Y  +  +VA    E E+ +    K + K ++D    
Sbjct: 213 MRLGISKIKVELDDLSLKYLKPDVYYDLVHKVALRKSEREQFVGAIVKEVKKHMDD---- 268

Query: 365 DLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
               +K ++    K  +SIYK ++    +I+++  +  +RI            L    + 
Sbjct: 269 --ANIKAQVDGRVKHFFSIYKKMVNQDKTIDQIYDLFAVRI------------LVDTVKD 314

Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRT 479
           CY  LG++H ++ PIP   KDYIA PKPN YQSLHTTLI     PF        E+QIRT
Sbjct: 315 CYAALGVIHEMYKPIPGRFKDYIAMPKPNMYQSLHTTLIGPNGQPF--------EIQIRT 366

Query: 480 EEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREW 539
            EM   AE GIAAH+  +            +G++P GK+          +++WL  I EW
Sbjct: 367 YEMHRTAEYGIAAHWKYK---------ESSDGKAPVGKSE-------EEKLNWLRQILEW 410

Query: 540 QEEFVGNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNK 597
           Q +   N   +EF+  +    DL    V+ FTP+G++K LP G+T VD+AY +H+ +GNK
Sbjct: 411 QRDMSDN---KEFMSLLKNDLDLFADSVYCFTPQGDVKTLPSGSTPVDFAYSVHSAVGNK 467

Query: 598 MVAAKVNGNLVSPTHVLANAEVVEIIT 624
           MV A+VNG LV   + + N + +EIIT
Sbjct: 468 MVGARVNGKLVPIEYEIKNGDRIEIIT 494


>gi|254479350|ref|ZP_05092687.1| RelA/SpoT family protein [Carboxydibrachium pacificum DSM 12653]
 gi|214034716|gb|EEB75453.1| RelA/SpoT family protein [Carboxydibrachium pacificum DSM 12653]
          Length = 720

 Score =  357 bits (916), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 207/491 (42%), Positives = 294/491 (59%), Gaps = 63/491 (12%)

Query: 139 SYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLL 197
            Y+  N  L+L+ +A   A +AH+GQ R SGEP+I+HPVEVA IL +LELD  +IAAGLL
Sbjct: 13  QYMGENANLDLLYKAYNFAVKAHEGQVRNSGEPYIVHPVEVAYILADLELDLTTIAAGLL 72

Query: 198 HDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMF 257
           HD +EDT V T++++ EEFG  +  +V+G   V+KLGK++ K    S  + +A+++R+M 
Sbjct: 73  HDVIEDTGV-TYDQLMEEFGKEIADLVDG---VTKLGKIEYK----SKVEQQAENMRKML 124

Query: 258 LAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELE 317
           +AM +++RVI++KLADRLHNMRTL ++PP KQ   A ETL+++AP+A  LG+ +IK ELE
Sbjct: 125 IAMAKDIRVILIKLADRLHNMRTLKYLPPDKQKEKAEETLEIYAPIAHRLGISKIKWELE 184

Query: 318 NLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVC 377
           +L   Y + E+Y  +  +VA   KE E+ ++     + +K      LD M +  E+    
Sbjct: 185 DLCLRYLHPEEYYDLVEKVAAKRKEREEFIQNIIATIKQK------LDEMGIPAEVDGRP 238

Query: 378 KEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWT 437
           K  YSIYK +     +  E+  +  +RII+            +  + CY VLG+VH +W 
Sbjct: 239 KHFYSIYKKMKTQNKTFEEIYDLLAIRIIV------------NTVKDCYGVLGIVHTLWK 286

Query: 438 PIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMDLIAERGIAA 492
           PIP   KDYIA PKPN YQSLHTT+I     PF        EVQIRT EM   AE GIAA
Sbjct: 287 PIPGRFKDYIAMPKPNMYQSLHTTVIGPKGEPF--------EVQIRTWEMHKTAEYGIAA 338

Query: 493 HYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREF 552
           H+                 R   GKT          ++ WL  + EWQ+E       +EF
Sbjct: 339 HW-----------------RYKEGKT---TEDEFDKKLVWLRQLLEWQKEL---KDPKEF 375

Query: 553 VDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTH 612
           ++T+  DL    VFVFTP+G++ +LP G+T +D+AY IHTEIG++M  AKVNG +V   +
Sbjct: 376 METLKIDLFTDEVFVFTPKGDVISLPAGSTPIDFAYSIHTEIGHRMNGAKVNGRIVPINY 435

Query: 613 VLANAEVVEII 623
            L   ++VEI+
Sbjct: 436 QLKTGDIVEIL 446


>gi|323142303|ref|ZP_08077135.1| GTP diphosphokinase [Phascolarctobacterium succinatutens YIT 12067]
 gi|322413187|gb|EFY04074.1| GTP diphosphokinase [Phascolarctobacterium succinatutens YIT 12067]
          Length = 754

 Score =  357 bits (915), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 198/485 (40%), Positives = 291/485 (60%), Gaps = 46/485 (9%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           YL+P ++  VR+A  LA +AH  Q R+SGEP+IIHP+ V  IL  L++D +++AA  LHD
Sbjct: 28  YLAPEQVAFVRKAYELAAKAHAAQTRKSGEPYIIHPIGVVSILVGLQMDDKTLAAAFLHD 87

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            VEDT+    + I+E+FG  V  +V+G   V+KLGK+    E  S +D + ++ R+MFLA
Sbjct: 88  VVEDTDY-KLDYIKEQFGTVVANLVDG---VTKLGKI----EYISKEDRQIENYRKMFLA 139

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M  ++RV+++KLADRLHNMRT+ +MP HKQ SI+ ETL+++APLA  LG+Y IK ELE+L
Sbjct: 140 MARDIRVVLIKLADRLHNMRTMKYMPVHKQQSISRETLEIYAPLAHRLGIYTIKWELEDL 199

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           +F Y   + Y  +  +V    +E E  + EA   L   +E         ++ EI+   K 
Sbjct: 200 AFRYMEPDIYYDLVEQVKIKRREREDMINEAMTTLKDAVEK------AGIRCEIQGRPKN 253

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSI+K +L+    ++E+  +  +R+            L    + CY  LG+VH +W PI
Sbjct: 254 FYSIHKKMLRDHKQLSEIYDLLAIRV------------LVDTVKDCYGTLGIVHSMWRPI 301

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDY+A PK N YQSLHTT+   L      LE+QIRT EM  I+E GIAAH+  +  
Sbjct: 302 PGRFKDYVAVPKSNMYQSLHTTV---LSNGGQPLEIQIRTFEMHRISEYGIAAHWRYKE- 357

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
                G ++P     +G            ++SWL  + EW ++      SR+FV+T+  D
Sbjct: 358 ----SGGSKPAAGGDKG---------FDAKLSWLRQLLEWHKDM---NDSRDFVNTVKMD 401

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           +    VFVFTPRG++ +LP G+  +D+AY IHT++GN+ V AKVNG +V   + L N ++
Sbjct: 402 IFADEVFVFTPRGDVIDLPVGSVPIDFAYRIHTDVGNRCVGAKVNGRIVPLDYQLKNGDI 461

Query: 620 VEIIT 624
           VE+IT
Sbjct: 462 VEVIT 466


>gi|20807650|ref|NP_622821.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
           [Thermoanaerobacter tengcongensis MB4]
 gi|20516195|gb|AAM24425.1| Guanosine polyphosphate pyrophosphohydrolases/synthetases
           [Thermoanaerobacter tengcongensis MB4]
          Length = 718

 Score =  357 bits (915), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 207/491 (42%), Positives = 294/491 (59%), Gaps = 63/491 (12%)

Query: 139 SYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLL 197
            Y+  N  L+L+ +A   A +AH+GQ R SGEP+I+HPVEVA IL +LELD  +IAAGLL
Sbjct: 11  QYMGENANLDLLYKAYNFAVKAHEGQVRNSGEPYIVHPVEVAYILADLELDLTTIAAGLL 70

Query: 198 HDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMF 257
           HD +EDT V T++++ EEFG  +  +V+G   V+KLGK++ K    S  + +A+++R+M 
Sbjct: 71  HDVIEDTGV-TYDQLMEEFGKEIADLVDG---VTKLGKIEYK----SKVEQQAENMRKML 122

Query: 258 LAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELE 317
           +AM +++RVI++KLADRLHNMRTL ++PP KQ   A ETL+++AP+A  LG+ +IK ELE
Sbjct: 123 IAMAKDIRVILIKLADRLHNMRTLKYLPPDKQKEKAEETLEIYAPIAHRLGISKIKWELE 182

Query: 318 NLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVC 377
           +L   Y + E+Y  +  +VA   KE E+ ++     + +K      LD M +  E+    
Sbjct: 183 DLCLRYLHPEEYYDLVEKVAAKRKEREEFIQNIIATIKQK------LDEMGIPAEVDGRP 236

Query: 378 KEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWT 437
           K  YSIYK +     +  E+  +  +RII+            +  + CY VLG+VH +W 
Sbjct: 237 KHFYSIYKKMKTQNKTFEEIYDLLAIRIIV------------NTVKDCYGVLGIVHTLWK 284

Query: 438 PIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMDLIAERGIAA 492
           PIP   KDYIA PKPN YQSLHTT+I     PF        EVQIRT EM   AE GIAA
Sbjct: 285 PIPGRFKDYIAMPKPNMYQSLHTTVIGPKGEPF--------EVQIRTWEMHKTAEYGIAA 336

Query: 493 HYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREF 552
           H+                 R   GKT          ++ WL  + EWQ+E       +EF
Sbjct: 337 HW-----------------RYKEGKT---TEDEFDKKLVWLRQLLEWQKEL---KDPKEF 373

Query: 553 VDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTH 612
           ++T+  DL    VFVFTP+G++ +LP G+T +D+AY IHTEIG++M  AKVNG +V   +
Sbjct: 374 METLKIDLFTDEVFVFTPKGDVISLPAGSTPIDFAYSIHTEIGHRMNGAKVNGRIVPINY 433

Query: 613 VLANAEVVEII 623
            L   ++VEI+
Sbjct: 434 QLKTGDIVEIL 444


>gi|153004178|ref|YP_001378503.1| (p)ppGpp synthetase I SpoT/RelA [Anaeromyxobacter sp. Fw109-5]
 gi|152027751|gb|ABS25519.1| (p)ppGpp synthetase I, SpoT/RelA [Anaeromyxobacter sp. Fw109-5]
          Length = 738

 Score =  356 bits (914), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 198/496 (39%), Positives = 287/496 (57%), Gaps = 45/496 (9%)

Query: 129 RLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
           RL + L     Y    +L+L+++A + + + H GQ R+SGEP++IHP+EVA +L EL+LD
Sbjct: 17  RLNDILDRVAGYHPGPDLDLIKKAYVYSAKVHQGQIRKSGEPYLIHPLEVAGLLAELKLD 76

Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
             S+  GLLHDT+EDT + T E I E FG  +  +V+G TK+S+      + E       
Sbjct: 77  EASVVTGLLHDTIEDT-LATKEEIAELFGPEIAELVDGVTKLSQFSAANTQEEK------ 129

Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
           +A++ R+M +AM +++RV++VKLADR HNMRTL HM P  Q  IA ETL ++APLA  LG
Sbjct: 130 QAENFRKMVVAMAKDIRVLLVKLADRTHNMRTLDHMKPESQERIARETLDIYAPLANRLG 189

Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
           +  +KSELE+LSF Y   +DY ++  RV    KE  + +EE   ++  +      L    
Sbjct: 190 IQWLKSELEDLSFKYLRPQDYVELSTRVEAEQKEKGEFVEEVVDLIRTR------LTGAG 243

Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
           +  ++    K  YSI++ + +     +++  +   R+I+                 CY  
Sbjct: 244 INAQVSGRVKHVYSIWRKMRQLDVDFDQIQDVIGFRVIVDSVAE------------CYES 291

Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAER 488
           LG++H +W P+P   KDYIA PKPN YQSLHTT++    E   R+EVQIRT+EM  IAE 
Sbjct: 292 LGIIHSLWKPVPGRFKDYIAIPKPNLYQSLHTTVVGPRGE---RIEVQIRTKEMHRIAEE 348

Query: 489 GIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMT 548
           G+AAH++            +  GR  +G  +   +A       WL  + EWQ E      
Sbjct: 349 GVAAHWA-----------YKEKGRDGKGAELSKKDAE---SFGWLRQLVEWQRELA---D 391

Query: 549 SREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLV 608
            REF++T+  DL    VFVFTP+G +K+LP+GAT VD+AY IH+E+G   V AKVNG LV
Sbjct: 392 PREFLETVKVDLFSDEVFVFTPKGAVKSLPRGATPVDFAYTIHSEVGEHTVGAKVNGKLV 451

Query: 609 SPTHVLANAEVVEIIT 624
              + L N + VEI+T
Sbjct: 452 PLRYKLKNGDTVEILT 467


>gi|332799394|ref|YP_004460893.1| (p)ppGpp synthetase I SpoT/RelA [Tepidanaerobacter acetatoxydans
           Re1]
 gi|332697129|gb|AEE91586.1| (p)ppGpp synthetase I, SpoT/RelA [Tepidanaerobacter acetatoxydans
           Re1]
          Length = 721

 Score =  356 bits (914), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 206/491 (41%), Positives = 293/491 (59%), Gaps = 54/491 (10%)

Query: 135 RPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAA 194
           +  +SY    +L+L+R+A M A EAH GQ R SGE FI HP+ VA IL +LELD  +IAA
Sbjct: 8   KQILSYSPSADLDLIRKAYMFAKEAHSGQHRVSGELFISHPLGVAMILADLELDIPTIAA 67

Query: 195 GLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLR 254
           GLLHD VEDT+  T E IE+ FG+ +  +V+G   V+KLGKL+ K +    ++ +A++LR
Sbjct: 68  GLLHDVVEDTDY-TIEDIEKIFGSEIAILVDG---VTKLGKLEFKTK----EEQQAENLR 119

Query: 255 QMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKS 314
           +MF AM +++R+I++KLADRLHNMRTL  MP  KQ   A ET+ +FAPLA  LG+ +IK 
Sbjct: 120 KMFFAMAKDIRIILIKLADRLHNMRTLKSMPEEKQREKAMETIDIFAPLAHRLGISKIKW 179

Query: 315 ELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT-VKTEI 373
           ELE+L+F Y   E Y  +  +VA   +E E  + +   IL +++       L T +  EI
Sbjct: 180 ELEDLAFRYLEPEHYYDLVEKVAKKRQERENHINKMIDILNERL-------LATGINAEI 232

Query: 374 RSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVH 433
           +   K  YSIYK +     +  ++  +  +R+I+            +  + CY  LG+VH
Sbjct: 233 QGRPKHFYSIYKKMKDQNKTFEQIYDLTAVRVIV------------NTVKDCYGALGVVH 280

Query: 434 GIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAH 493
            +W PIP   KDYIA PKPN YQSLHTT+I     S   LE+QIRT EM   AE GIAAH
Sbjct: 281 TLWKPIPGRFKDYIAMPKPNMYQSLHTTVID---SSGDPLEIQIRTYEMHKTAEYGIAAH 337

Query: 494 YSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFV 553
           +                    R K    N+     ++SWL  I +WQ E      +++F+
Sbjct: 338 W--------------------RYKEGDKNSNEFEQKLSWLREILDWQREL---RDAKDFM 374

Query: 554 DTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHV 613
           + +  DL    V+VFTP+G++ +LP G+  VD+AY IHT++GN+ + AKVNG +V   + 
Sbjct: 375 ENLKIDLFTDEVYVFTPKGDVIDLPMGSCPVDFAYRIHTDVGNRCIGAKVNGKMVPLDYK 434

Query: 614 LANAEVVEIIT 624
           LAN ++VEI+T
Sbjct: 435 LANGDIVEIVT 445


>gi|312110098|ref|YP_003988414.1| (p)ppGpp synthetase I SpoT/RelA [Geobacillus sp. Y4.1MC1]
 gi|336234522|ref|YP_004587138.1| (p)ppGpp synthetase I SpoT/RelA [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|423719137|ref|ZP_17693319.1| (p)ppGpp synthetase I spoT/relA [Geobacillus thermoglucosidans
           TNO-09.020]
 gi|311215199|gb|ADP73803.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacillus sp. Y4.1MC1]
 gi|335361377|gb|AEH47057.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|383368040|gb|EID45315.1| (p)ppGpp synthetase I spoT/relA [Geobacillus thermoglucosidans
           TNO-09.020]
          Length = 731

 Score =  356 bits (914), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 205/490 (41%), Positives = 298/490 (60%), Gaps = 51/490 (10%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           YL   ++E +++A   A  AH  Q R+SGEP+IIHP++VA IL +L++D  +IAAG LHD
Sbjct: 19  YLPEKDVEFIKKAYEFADRAHRDQYRKSGEPYIIHPIQVAGILVDLKMDPATIAAGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            VEDT   T E +E EFG+ V  +V+G   V+KLGK+K K    S ++ +A++ R+MFLA
Sbjct: 79  VVEDTEA-TKEDLEREFGSEVAMLVDG---VTKLGKIKYK----SQEEQQAENHRKMFLA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M +++RVI++KLADRLHNMRTL H+P  KQ  IA ETL++FAPLA  LG+ +IK ELE+ 
Sbjct: 131 MAQDIRVILIKLADRLHNMRTLKHLPIEKQRRIANETLEIFAPLAHRLGISKIKWELEDT 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           +  Y N + Y     R+ +L K+   E E+  + +++++ +   L+ +++  EI    K 
Sbjct: 191 ALRYLNPQQYY----RIVNLMKKKRAEREQYLEEVIQEVRER--LNEVSIPCEIYGRPKH 244

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIY+ ++      NE+  +  +RII+            +  + CY VLG++H  W P+
Sbjct: 245 IYSIYRKMVMQNKQFNEIYDLLAVRIIV------------NSIKDCYAVLGIIHTCWKPM 292

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PKPN YQSLHTT+I    E    LEVQIRT EM  IAE GIAAH++ +  
Sbjct: 293 PGRFKDYIAMPKPNMYQSLHTTVIGPKGEP---LEVQIRTFEMHQIAEFGIAAHWAYK-- 347

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
                           GKT+  N  +   ++SW   I EWQ +      + EF++++  D
Sbjct: 348 ---------------EGKTIKPN--SFEEKLSWFREILEWQND---ASNAEEFMESLKMD 387

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           L    VFVFTP+G++  LP G+  +D+AY IH+EIGNK + AKVNG +V   + L   ++
Sbjct: 388 LFSDMVFVFTPKGDVIELPAGSVPIDFAYRIHSEIGNKTIGAKVNGKMVPLDYKLQTGDI 447

Query: 620 VEIITYNVSF 629
           VEI+T   S+
Sbjct: 448 VEILTSKHSY 457


>gi|39997334|ref|NP_953285.1| GTP/GDP 3'-pyrophosphokinase and (p)ppGpp 3'-pyrophosphohydrolase
           [Geobacter sulfurreducens PCA]
 gi|409912678|ref|YP_006891143.1| GTP/GDP 3'-pyrophosphokinase and (p)ppGpp 3'-pyrophosphohydrolase
           [Geobacter sulfurreducens KN400]
 gi|39984225|gb|AAR35612.1| GTP/GDP 3'-pyrophosphokinase and (p)ppGpp 3'-pyrophosphohydrolase
           [Geobacter sulfurreducens PCA]
 gi|298506271|gb|ADI84994.1| GTP/GDP 3'-pyrophosphokinase and (p)ppGpp 3'-pyrophosphohydrolase
           [Geobacter sulfurreducens KN400]
          Length = 716

 Score =  356 bits (914), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 203/496 (40%), Positives = 296/496 (59%), Gaps = 52/496 (10%)

Query: 129 RLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
           RL + L   ++Y    +L+L+R+A +   + H GQ R SGEP+++HP+EVA +L +L+LD
Sbjct: 3   RLNDILDKVVTYNPVADLDLIRKAYVYCAKVHQGQTRLSGEPYLVHPMEVAGVLADLKLD 62

Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
             ++  GLLHDT+EDT + T E +E  FGA V  +V+G   V+K+GK+  K +  S    
Sbjct: 63  VPTVVTGLLHDTIEDT-LTTREELEGMFGAEVANLVDG---VTKIGKIHFKTKEES---- 114

Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
           +A++ R+M LAM  ++RVI+VKLADRLHNMRTL + P  KQ SI+ ETL ++APLA  LG
Sbjct: 115 QAENFRKMLLAMANDIRVILVKLADRLHNMRTLQYQPEPKQRSISRETLDIYAPLANRLG 174

Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
           +  IKSELE+LSF Y   + Y  +  +VA   KE E  +EE  +I++ K+ +        
Sbjct: 175 ISWIKSELEDLSFRYLEPQIYYDLASKVAKKKKERESYVEEVRQIIVSKLAEHDL----- 229

Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
            K ++    K  YSI++ +      I+++  +  +R+++            +  + CY V
Sbjct: 230 -KGDVFGRSKHLYSIWRKMQARNVDIDQIYDLVAIRVMV------------NDIRECYEV 276

Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAER 488
           LG++H  W PIP   KDYIA PK N YQSLHTT+I    E   R+EVQIRT +M  +AE 
Sbjct: 277 LGIIHSTWKPIPGRFKDYIAMPKGNMYQSLHTTVIGPHGE---RMEVQIRTSDMHRVAEA 333

Query: 489 GIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMT 548
           GIAAH+  +             G+    K V         R +WL  + EWQ+E      
Sbjct: 334 GIAAHWKYK------------EGKGYDEKEVK--------RFAWLRQLLEWQQEL---QD 370

Query: 549 SREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLV 608
           S EF++T+  +L    V+VFTPRG++K+ PKG+T +D AY IHT+IG++ V AKVNG LV
Sbjct: 371 SHEFMNTVKVELFPEEVYVFTPRGDVKSFPKGSTPIDLAYTIHTDIGHRCVGAKVNGKLV 430

Query: 609 SPTHVLANAEVVEIIT 624
              + L N ++VE+IT
Sbjct: 431 PLKYELKNGDIVEVIT 446


>gi|438002543|ref|YP_007272286.1| GTP pyrophosphokinase [Tepidanaerobacter acetatoxydans Re1]
 gi|432179337|emb|CCP26310.1| GTP pyrophosphokinase [Tepidanaerobacter acetatoxydans Re1]
          Length = 716

 Score =  356 bits (914), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 206/491 (41%), Positives = 293/491 (59%), Gaps = 54/491 (10%)

Query: 135 RPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAA 194
           +  +SY    +L+L+R+A M A EAH GQ R SGE FI HP+ VA IL +LELD  +IAA
Sbjct: 3   KQILSYSPSADLDLIRKAYMFAKEAHSGQHRVSGELFISHPLGVAMILADLELDIPTIAA 62

Query: 195 GLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLR 254
           GLLHD VEDT+  T E IE+ FG+ +  +V+G   V+KLGKL+ K +    ++ +A++LR
Sbjct: 63  GLLHDVVEDTDY-TIEDIEKIFGSEIAILVDG---VTKLGKLEFKTK----EEQQAENLR 114

Query: 255 QMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKS 314
           +MF AM +++R+I++KLADRLHNMRTL  MP  KQ   A ET+ +FAPLA  LG+ +IK 
Sbjct: 115 KMFFAMAKDIRIILIKLADRLHNMRTLKSMPEEKQREKAMETIDIFAPLAHRLGISKIKW 174

Query: 315 ELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT-VKTEI 373
           ELE+L+F Y   E Y  +  +VA   +E E  + +   IL +++       L T +  EI
Sbjct: 175 ELEDLAFRYLEPEHYYDLVEKVAKKRQERENHINKMIDILNERL-------LATGINAEI 227

Query: 374 RSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVH 433
           +   K  YSIYK +     +  ++  +  +R+I+            +  + CY  LG+VH
Sbjct: 228 QGRPKHFYSIYKKMKDQNKTFEQIYDLTAVRVIV------------NTVKDCYGALGVVH 275

Query: 434 GIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAH 493
            +W PIP   KDYIA PKPN YQSLHTT+I     S   LE+QIRT EM   AE GIAAH
Sbjct: 276 TLWKPIPGRFKDYIAMPKPNMYQSLHTTVID---SSGDPLEIQIRTYEMHKTAEYGIAAH 332

Query: 494 YSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFV 553
           +                    R K    N+     ++SWL  I +WQ E      +++F+
Sbjct: 333 W--------------------RYKEGDKNSNEFEQKLSWLREILDWQREL---RDAKDFM 369

Query: 554 DTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHV 613
           + +  DL    V+VFTP+G++ +LP G+  VD+AY IHT++GN+ + AKVNG +V   + 
Sbjct: 370 ENLKIDLFTDEVYVFTPKGDVIDLPMGSCPVDFAYRIHTDVGNRCIGAKVNGKMVPLDYK 429

Query: 614 LANAEVVEIIT 624
           LAN ++VEI+T
Sbjct: 430 LANGDIVEIVT 440


>gi|322420743|ref|YP_004199966.1| (p)ppGpp synthetase I SpoT/RelA [Geobacter sp. M18]
 gi|320127130|gb|ADW14690.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacter sp. M18]
          Length = 716

 Score =  356 bits (913), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 202/496 (40%), Positives = 293/496 (59%), Gaps = 52/496 (10%)

Query: 129 RLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
           RL + L    SY    +L+L+R+A +   + H GQ R SGEP++IHP+EVA IL +L+LD
Sbjct: 3   RLNDILEKVSSYNPGADLDLLRKAYVFCAKVHQGQTRLSGEPYLIHPMEVAGILADLKLD 62

Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
             ++  GLLHDTVEDT + T E +E  FGA V R+V+G   V+K+GK+  K +  S    
Sbjct: 63  LPAVVTGLLHDTVEDT-LTTHEELESLFGAEVARLVDG---VTKIGKIHFKTKEES---- 114

Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
           +A++ R+M LAM  ++RVI+VKLADRLHNMRTL + P  KQ +IA ETL ++AP+A  LG
Sbjct: 115 QAENFRKMLLAMATDIRVILVKLADRLHNMRTLQYQPEPKQRTIAKETLDIYAPIANRLG 174

Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
           +  +K ELE+LSF Y   + Y  +  +VA   +E E  +    +I+ K++E+        
Sbjct: 175 ISWVKGELEDLSFRYLEPQLYYDLASKVAKKKQERESYVSTVKEIIKKQLEE------HG 228

Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
           +K ++    K  YSIY+ +      I+E+  +  +R+ +               + CY V
Sbjct: 229 IKGDVSGRSKHLYSIYRKMQSRNVDIDEIYDLIAIRVSV------------DDIRECYEV 276

Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAER 488
           LG++H  W PIP   KDYIA PK N YQSLHTT+I    E   R+EVQIRT EM  +AE 
Sbjct: 277 LGVIHSTWKPIPGRFKDYIAMPKGNMYQSLHTTVIGPYGE---RMEVQIRTVEMHRVAES 333

Query: 489 GIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMT 548
           GIAAH+  +             G+    K V         R +W+  + EWQ+E      
Sbjct: 334 GIAAHWKYK------------EGKGYDEKEV--------RRFTWIRQLLEWQQEL---DD 370

Query: 549 SREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLV 608
           S+EF+DT+  +L    VF+FTP+G++K  PKG+T +D+AY +HT++G++ V AKVNG LV
Sbjct: 371 SKEFMDTVKVELFPEDVFIFTPKGDVKGFPKGSTPIDFAYSVHTDVGHRCVGAKVNGKLV 430

Query: 609 SPTHVLANAEVVEIIT 624
              + L   ++VE+IT
Sbjct: 431 PLKYELKTGDIVEVIT 446


>gi|253699682|ref|YP_003020871.1| (p)ppGpp synthetase I SpoT/RelA [Geobacter sp. M21]
 gi|251774532|gb|ACT17113.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacter sp. M21]
          Length = 716

 Score =  355 bits (912), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 202/496 (40%), Positives = 293/496 (59%), Gaps = 52/496 (10%)

Query: 129 RLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
           RL + L    SY    +L+L+R+A +   + H GQ R SGEP++IHP+EVA IL +L LD
Sbjct: 3   RLNDILEKVASYNPGCDLDLLRKAYVFCAKVHQGQTRLSGEPYLIHPMEVAGILADLRLD 62

Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
             ++  GLLHDTVEDT + T E +E  FGA V R+V+G   V+K+GK+  K +  S    
Sbjct: 63  LAAVVTGLLHDTVEDT-LTTHEELESLFGAEVARLVDG---VTKIGKIHFKTKEES---- 114

Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
           +A++ R+M LAM  ++RVI+VKLADRLHNMRTL + P  KQ +IA ETL ++AP+A  LG
Sbjct: 115 QAENFRKMLLAMATDIRVILVKLADRLHNMRTLQYQPEPKQRTIAKETLDIYAPIANRLG 174

Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
           +  +K ELE+LSF Y   + Y  +  +VA   +E E  +    +I+ K++E+        
Sbjct: 175 ISWVKGELEDLSFRYLEPQLYYDLAGKVAKKKQERESYVATVKEIIKKQLEEH------G 228

Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
           +K ++    K  YSIY+ +      I+E+  +  +R+ ++              + CY V
Sbjct: 229 IKGDVSGRSKHLYSIYRKMQSRNVDIDEIYDLIAIRVSVE------------DIRECYEV 276

Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAER 488
           LG++H  W PIP   KDYIA PK N YQSLHTT+I    E   R+EVQIRT EM  +AE 
Sbjct: 277 LGIIHSTWKPIPGRFKDYIAMPKGNMYQSLHTTVIGPYGE---RMEVQIRTVEMHRVAES 333

Query: 489 GIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMT 548
           GIAAH+  +             G+    K V         R +W+  + EWQ+E      
Sbjct: 334 GIAAHWKYK------------EGKGYDEKDVK--------RFTWIRQLLEWQQEL---DD 370

Query: 549 SREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLV 608
           S+EF+DT+  +L    VF+FTP+G++K  PKG+T +D+AY +HT++G++ V AKVNG LV
Sbjct: 371 SKEFMDTVKVELFPEDVFIFTPKGDVKGFPKGSTPIDFAYSVHTDVGHRCVGAKVNGKLV 430

Query: 609 SPTHVLANAEVVEIIT 624
              + L   ++VE+IT
Sbjct: 431 PLKYELKTGDIVEVIT 446


>gi|222055238|ref|YP_002537600.1| (p)ppGpp synthetase I SpoT/RelA [Geobacter daltonii FRC-32]
 gi|221564527|gb|ACM20499.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacter daltonii FRC-32]
          Length = 716

 Score =  355 bits (912), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 209/496 (42%), Positives = 295/496 (59%), Gaps = 52/496 (10%)

Query: 129 RLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
           RL + L    SY    +LELVR+A +   + H GQ R SGEP+++HP+EVA +L EL+LD
Sbjct: 3   RLNDILEKVSSYNPSCDLELVRKAYVFCAKVHQGQTRLSGEPYLVHPMEVAGVLAELKLD 62

Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
             ++  GLLHDTVEDT     E +EE FG  V R+V+G   V+K+GK+  K +  S    
Sbjct: 63  VPTVVTGLLHDTVEDTLTTL-EELEEMFGPEVARLVDG---VTKIGKIHFKTKEES---- 114

Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
           +A++ R+M LAM  ++RVI+VKLADRLHNMRTL + P  KQ SIA ETL ++AP+A  LG
Sbjct: 115 QAENFRKMLLAMANDIRVILVKLADRLHNMRTLQYQPEPKQRSIAKETLDIYAPIANRLG 174

Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
           +  +KSELE+LSF Y + + Y  +  +V    KE E  ++E  +I+  K+ D        
Sbjct: 175 ISWVKSELEDLSFRYLDPQIYYDLASKVTKKKKERETYVDEVMQIIKAKLVD------HG 228

Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
           +K E+    K  YSIY+ +      I+E+  +  +R++++              + CY V
Sbjct: 229 IKGEVSGRSKHLYSIYRKMQSRSVDIDEIYDLIAIRVMVE------------DIRECYEV 276

Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAER 488
           LG++H  W PIP   KDYIA PK N YQSLHTT+I    E   R+EVQIRT EM  +AE 
Sbjct: 277 LGIIHSTWKPIPGRFKDYIAMPKGNMYQSLHTTVIGPYGE---RMEVQIRTSEMHRVAEA 333

Query: 489 GIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMT 548
           GIAAH+  +             G+    K V         R +WL  + EWQ+E      
Sbjct: 334 GIAAHWKYK------------EGKGYDEKEV--------KRFTWLRQLLEWQQEL---DD 370

Query: 549 SREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLV 608
           SREF+DT+  +L    V+VFTP+G++K  PKG+T +D+AY +HT++G++ V AKVNG LV
Sbjct: 371 SREFMDTVKVELFPEEVYVFTPKGDVKGYPKGSTPIDFAYSVHTDVGHRCVGAKVNGKLV 430

Query: 609 SPTHVLANAEVVEIIT 624
              + L N ++VE+IT
Sbjct: 431 PLKYELKNGDIVEVIT 446


>gi|291539586|emb|CBL12697.1| (p)ppGpp synthetase, RelA/SpoT family [Roseburia intestinalis
           XB6B4]
          Length = 770

 Score =  355 bits (912), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 206/508 (40%), Positives = 306/508 (60%), Gaps = 57/508 (11%)

Query: 125 DSPERLWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILG 183
           +SPE+L+++L  ++    P+ ++ L+ +A  +A +AH+GQ R+SGEP+IIHP+ VA IL 
Sbjct: 29  ESPEKLYDELIASVRKYHPSTDISLIEKAYHVARDAHEGQARKSGEPYIIHPLCVAIILA 88

Query: 184 ELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENH 243
           ELELD E+I AGLLHD VEDT V+T E+I +EFG  V  +V+G   V+KLG+L    +  
Sbjct: 89  ELELDKETIVAGLLHDVVEDT-VMTDEQIAQEFGDEVALLVDG---VTKLGQLSYDADKV 144

Query: 244 SVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPL 303
            VQ   A++LR+MFLAM +++RVI++KLADRLHNMRTL +M P KQ   A ET+ ++AP+
Sbjct: 145 EVQ---AENLRKMFLAMAKDIRVILIKLADRLHNMRTLKYMTPEKQKEKARETMDIYAPI 201

Query: 304 AKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQF 363
           A+ LG+ +IK EL++LS  Y   + Y  +  ++A      ++ +++  + + + I+D   
Sbjct: 202 AQRLGISKIKIELDDLSLKYLEPDAYYDLVHQIAQRKSVRDEYVQKLVEEVRQHIKD--- 258

Query: 364 LDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQ 423
                +  ++    K  +SIYK ++    +++++  +  +RII+               +
Sbjct: 259 ---AGIPAQVDGRAKHFFSIYKKMVNQHKTLDQIYDLFAIRIIV------------DSVK 303

Query: 424 ICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIR 478
            CY  LG++H ++ PIP   KDYIA PKPN YQSLHTTLI     PF        E+QIR
Sbjct: 304 DCYAALGVIHEMYKPIPGRFKDYIAMPKPNMYQSLHTTLIGPTGQPF--------EIQIR 355

Query: 479 TEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIRE 538
           T EM   AE GIAAH+  +         A  NG   +  TV         ++SWL  I E
Sbjct: 356 TFEMHRTAEYGIAAHWKYK--------EASNNGGVSQPMTVTEEE-----KLSWLRQILE 402

Query: 539 WQEEFVGNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGN 596
           WQ +   N   +EF+  +    DL    VF FTP G++KNLP G+T +D+AY IH+ +GN
Sbjct: 403 WQRDMSDN---KEFMSLLKSDLDLFSDTVFCFTPTGDVKNLPTGSTPIDFAYSIHSAVGN 459

Query: 597 KMVAAKVNGNLVSPTHVLANAEVVEIIT 624
           KM+ AKVNG LV   +++ N + VE+IT
Sbjct: 460 KMIGAKVNGKLVPIDYIIQNGDRVEVIT 487


>gi|189425343|ref|YP_001952520.1| (p)ppGpp synthetase I SpoT/RelA [Geobacter lovleyi SZ]
 gi|189421602|gb|ACD96000.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacter lovleyi SZ]
          Length = 716

 Score =  355 bits (912), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 204/496 (41%), Positives = 288/496 (58%), Gaps = 52/496 (10%)

Query: 129 RLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
           RL + L   ++Y    +L L+R+A +   + H GQ R SGEP+IIHP+EVA +L  L+LD
Sbjct: 3   RLNDILDTVVTYNPSADLNLIRKAYVYCAKVHQGQTRLSGEPYIIHPLEVAGLLAGLKLD 62

Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
             SI  G LHDT+EDT + T E + E FG  V  +V+G TK+SK+   K K EN      
Sbjct: 63  VPSIVTGFLHDTIEDT-LTTSEELAEMFGKEVAELVDGVTKISKI-HFKTKEEN------ 114

Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
           +A++ R+M +AM  ++RVI+VKLADRLHNMRTL   P  KQ SI+ ET+ ++AP+A  LG
Sbjct: 115 QAENFRKMLIAMANDIRVILVKLADRLHNMRTLQFQPDTKQRSISRETMDIYAPIAHRLG 174

Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
           +  IK+ELE+LSF Y   + Y  +  ++    +E E  + E  + + +K+ + Q +    
Sbjct: 175 ISWIKTELEDLSFRYLQPDVYFDLATKIQRKKQERESFIHEIQEAIRQKLVEHQIV---- 230

Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
              E+    K  YSIY+ + K +    E+  +  LRI            L    + CY V
Sbjct: 231 --GEVSGRSKHLYSIYRKMEKRKVDFEEIYDLTALRI------------LVDDIKSCYEV 276

Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAER 488
           LGL+H  W PIP   KDYIA PK N YQSLHTT+I    +   R+EVQIRT EM  +AE 
Sbjct: 277 LGLIHSSWRPIPGRFKDYIAMPKGNMYQSLHTTVIGPHGD---RMEVQIRTHEMHRVAEA 333

Query: 489 GIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMT 548
           GIAAH+  +             G+    K V         R +WL  + EWQ+E      
Sbjct: 334 GIAAHWKYK------------EGKGYDEKEVK--------RFAWLRQLLEWQQEL---QD 370

Query: 549 SREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLV 608
           SREF+D++  +L    V+VFTP+G++K  PKG+T +D+AY +HT++G++ V AKVNG LV
Sbjct: 371 SREFMDSVKVELFPEEVYVFTPKGDVKGFPKGSTPIDFAYAVHTDVGHRCVGAKVNGKLV 430

Query: 609 SPTHVLANAEVVEIIT 624
              H L N ++VE+IT
Sbjct: 431 PLKHELQNGDIVEVIT 446


>gi|291535022|emb|CBL08134.1| (p)ppGpp synthetase, RelA/SpoT family [Roseburia intestinalis
           M50/1]
          Length = 770

 Score =  355 bits (912), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 206/508 (40%), Positives = 306/508 (60%), Gaps = 57/508 (11%)

Query: 125 DSPERLWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILG 183
           +SPE+L+++L  ++    P+ ++ L+ +A  +A +AH+GQ R+SGEP+IIHP+ VA IL 
Sbjct: 29  ESPEKLYDELIASVRKYHPSTDISLIEKAYHVARDAHEGQARKSGEPYIIHPLCVAIILA 88

Query: 184 ELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENH 243
           ELELD E+I AGLLHD VEDT V+T E+I +EFG  V  +V+G   V+KLG+L    +  
Sbjct: 89  ELELDKETIVAGLLHDVVEDT-VMTDEQIAQEFGDEVALLVDG---VTKLGQLSYDADKV 144

Query: 244 SVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPL 303
            VQ   A++LR+MFLAM +++RVI++KLADRLHNMRTL +M P KQ   A ET+ ++AP+
Sbjct: 145 EVQ---AENLRKMFLAMAKDIRVILIKLADRLHNMRTLKYMTPEKQKEKARETMDIYAPI 201

Query: 304 AKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQF 363
           A+ LG+ +IK EL++LS  Y   + Y  +  ++A      ++ +++  + + + I+D   
Sbjct: 202 AQRLGISKIKIELDDLSLKYLEPDAYYDLVHQIAQRKSVRDEYVQKLVEEVRQHIKD--- 258

Query: 364 LDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQ 423
                +  ++    K  +SIYK ++    +++++  +  +RII+               +
Sbjct: 259 ---AGIPAQVDGRAKHFFSIYKKMVNQHKTLDQIYDLFAIRIIV------------DSVK 303

Query: 424 ICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIR 478
            CY  LG++H ++ PIP   KDYIA PKPN YQSLHTTLI     PF        E+QIR
Sbjct: 304 DCYAALGVIHEMYKPIPGRFKDYIAMPKPNMYQSLHTTLIGPTGQPF--------EIQIR 355

Query: 479 TEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIRE 538
           T EM   AE GIAAH+  +         A  NG   +  TV         ++SWL  I E
Sbjct: 356 TFEMHRTAEYGIAAHWKYK--------EASNNGGVSQPMTVTEEE-----KLSWLRQILE 402

Query: 539 WQEEFVGNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGN 596
           WQ +   N   +EF+  +    DL    VF FTP G++KNLP G+T +D+AY IH+ +GN
Sbjct: 403 WQRDMSDN---KEFMSLLKSDLDLFSDTVFCFTPTGDVKNLPTGSTPIDFAYSIHSAVGN 459

Query: 597 KMVAAKVNGNLVSPTHVLANAEVVEIIT 624
           KM+ AKVNG LV   +++ N + VE+IT
Sbjct: 460 KMIGAKVNGKLVPIDYIIQNGDRVEVIT 487


>gi|435854533|ref|YP_007315852.1| (p)ppGpp synthetase, RelA/SpoT family [Halobacteroides halobius DSM
           5150]
 gi|433670944|gb|AGB41759.1| (p)ppGpp synthetase, RelA/SpoT family [Halobacteroides halobius DSM
           5150]
          Length = 722

 Score =  355 bits (912), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 205/486 (42%), Positives = 290/486 (59%), Gaps = 52/486 (10%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           SY+    L+LV++   LA EAH GQ R SGEPF+ HP+ VA+IL ELELD  SI A LLH
Sbjct: 12  SYIEDPNLDLVKKGYYLAKEAHQGQMRVSGEPFLSHPLRVAQILAELELDVVSITAALLH 71

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT + T + IEEEFGA +R +V G TK++K+   K + E+      +A  LR+MFL
Sbjct: 72  DVVEDTEI-TADEIEEEFGAEIRLLVNGVTKLNKID-FKTREEH------QAASLRKMFL 123

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM E++RV+++KLADRLHNMRTL+++   K+   A ETL+++APLA  LGM ++K ELE+
Sbjct: 124 AMAEDIRVVLIKLADRLHNMRTLNYLSEEKRKRKANETLEIYAPLAHRLGMSRLKWELED 183

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
           LSF Y   + Y ++  ++A    E E  +E+    L  K+ED      + ++ +I    K
Sbjct: 184 LSFRYLEPDKYHELANKLAKNRAEREAYIEDVIDTLEGKLED------VDIQGKIYGRPK 237

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSI + ++    S +E+  +  LR+I+               + CY VLG++H IW P
Sbjct: 238 HLYSINQKIINKNKSFDEIYDLTALRVIV------------DSVKECYQVLGILHEIWNP 285

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P  +KDYIA PK N YQSLHTT+I    E    LE+QIRT EM   AE GIAAH+    
Sbjct: 286 MPGRIKDYIAMPKSNMYQSLHTTVIGPKGEP---LEIQIRTWEMHRTAEYGIAAHW---- 338

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                           R K     + +   +ISWL  + EWQ +      +REF++ +  
Sbjct: 339 ----------------RYKDGNPEDDDFEKKISWLRQLLEWQHDL---KDAREFMENLKI 379

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           +L    VFVFTP+G++  LPKGAT VD+AY IHT++G+  V AKVNG ++   + L N +
Sbjct: 380 ELFEDEVFVFTPKGDVMPLPKGATPVDFAYHIHTDVGHTCVGAKVNGKMIPLEYRLDNGD 439

Query: 619 VVEIIT 624
           ++EI+T
Sbjct: 440 IIEILT 445


>gi|197119579|ref|YP_002140006.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA [Geobacter
           bemidjiensis Bem]
 gi|197088939|gb|ACH40210.1| GTP/GDP 3'-pyrophosphokinase and (p)ppGpp 3'-pyrophosphohydrolase
           [Geobacter bemidjiensis Bem]
          Length = 716

 Score =  355 bits (911), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 202/496 (40%), Positives = 293/496 (59%), Gaps = 52/496 (10%)

Query: 129 RLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
           RL + L    SY    +L+L+R+A +   + H GQ R SGEP++IHP+EVA IL +L LD
Sbjct: 3   RLNDILEKVASYNPGCDLDLLRKAYVFCAKVHQGQTRLSGEPYLIHPMEVAGILADLRLD 62

Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
             ++  GLLHDTVEDT + T E +E  FGA V R+V+G   V+K+GK+  K +  S    
Sbjct: 63  LPAVVTGLLHDTVEDT-LTTHEELESLFGAEVARLVDG---VTKIGKIHFKTKEES---- 114

Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
           +A++ R+M LAM  ++RVI+VKLADRLHNMRTL + P  KQ +IA ETL ++AP+A  LG
Sbjct: 115 QAENFRKMLLAMATDIRVILVKLADRLHNMRTLQYQPEPKQRTIAKETLDIYAPIANRLG 174

Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
           +  +K ELE+LSF Y   + Y  +  +VA   +E E  +    +I+ K++E+        
Sbjct: 175 ISWVKGELEDLSFRYLEPQLYYDLAGKVAKKKQERESYVATVKEIIKKQLEEH------G 228

Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
           +K ++    K  YSIY+ +      I+E+  +  +R+ ++              + CY V
Sbjct: 229 IKGDVSGRSKHLYSIYRKMQSRNVDIDEIYDLIAIRVSVE------------DIRECYEV 276

Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAER 488
           LG++H  W PIP   KDYIA PK N YQSLHTT+I    E   R+EVQIRT EM  +AE 
Sbjct: 277 LGIIHSTWKPIPGRFKDYIAMPKGNMYQSLHTTVIGPYGE---RMEVQIRTVEMHRVAES 333

Query: 489 GIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMT 548
           GIAAH+  +             G+    K V         R +W+  + EWQ+E      
Sbjct: 334 GIAAHWKYK------------EGKGYDDKDVK--------RFTWIRQLLEWQQEL---DD 370

Query: 549 SREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLV 608
           S+EF+DT+  +L    VF+FTP+G++K  PKG+T +D+AY +HT++G++ V AKVNG LV
Sbjct: 371 SKEFMDTVKVELFPEDVFIFTPKGDVKGFPKGSTPIDFAYSVHTDVGHRCVGAKVNGKLV 430

Query: 609 SPTHVLANAEVVEIIT 624
              + L   ++VE+IT
Sbjct: 431 PLKYELKTGDIVEVIT 446


>gi|125973859|ref|YP_001037769.1| (p)ppGpp synthetase I SpoT/RelA [Clostridium thermocellum ATCC
           27405]
 gi|125714084|gb|ABN52576.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium thermocellum ATCC
           27405]
          Length = 724

 Score =  355 bits (910), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 205/493 (41%), Positives = 297/493 (60%), Gaps = 64/493 (12%)

Query: 138 ISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           I   +PN +  L+ +A  L+ EAH GQ+R SG+PFI+HP+EVA IL +LELD  +I AG+
Sbjct: 12  IKKYNPNCDFALIEKAHNLSLEAHKGQQRESGDPFIVHPMEVANILADLELDCTAIVAGI 71

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT+  T E+I E FG  V  +V+G   V+KLGK+    +    ++++A++LR+M
Sbjct: 72  LHDIVEDTSY-TIEQIRENFGDEVANLVDG---VTKLGKIPYTTK----EELQAENLRKM 123

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
           FLAM +++RVI++KLADRLHNMRTL +MPP KQ   A ETL+++APLA  LG+ +IK EL
Sbjct: 124 FLAMAKDIRVILIKLADRLHNMRTLKYMPPEKQIEKAKETLEIYAPLAHRLGISKIKWEL 183

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+L   Y + + Y  +  ++A   +E E  + E  K + +K  +      + +   I   
Sbjct: 184 EDLCLRYLDPKGYYDLVNKIAKKRREREAYISEIIKTIQEKTVE------IGIDAHIEGR 237

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSIY+ +++   +I ++  +  +R+I+            +  + CY VLGLVH I+
Sbjct: 238 PKHFYSIYRKMVQQNKTIEQIYDLFAVRVIV------------TTVKDCYAVLGLVHEIF 285

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMDLIAERGIA 491
            P+P   KDYIA PKPN YQSLHTTLI     PF        EVQIRT EM  +AE GIA
Sbjct: 286 KPMPGRFKDYIAMPKPNMYQSLHTTLIGHEGVPF--------EVQIRTWEMHRVAEVGIA 337

Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
           AH+                 +   GK+      +   +++WL  + EWQ+E      + E
Sbjct: 338 AHW-----------------KYKEGKSA----DDYDNKLAWLRQLLEWQKEM---RDASE 373

Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
           F++T+  DL    VFVFTP+G++ +LP G+T +D+AY IH+ IGNKM  AKVN  +V   
Sbjct: 374 FMETLKIDLFTDEVFVFTPKGDVISLPAGSTPIDFAYAIHSAIGNKMSGAKVNNKIVPID 433

Query: 612 HVLANAEVVEIIT 624
           +VL N ++VEI+T
Sbjct: 434 YVLQNGDIVEILT 446


>gi|325662331|ref|ZP_08150940.1| hypothetical protein HMPREF0490_01679 [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|331086134|ref|ZP_08335216.1| hypothetical protein HMPREF0987_01519 [Lachnospiraceae bacterium
           9_1_43BFAA]
 gi|325471333|gb|EGC74556.1| hypothetical protein HMPREF0490_01679 [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|330406293|gb|EGG85807.1| hypothetical protein HMPREF0987_01519 [Lachnospiraceae bacterium
           9_1_43BFAA]
          Length = 767

 Score =  355 bits (910), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 211/540 (39%), Positives = 318/540 (58%), Gaps = 72/540 (13%)

Query: 99  SSLLHVACKRWRLCLSPSVSSDAFKEDSPERLWEDLRPTISYLSPN-ELELVRRALMLAF 157
           S  L +  K +++    +V      +D PE L++ L   I    P+ ++ ++ +A  +A 
Sbjct: 2   SETLEIRPKEFKMVDGHAVKEPEDYQD-PELLYQSLIKRIREYHPSADISMIEKAYRIAK 60

Query: 158 EAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFG 217
           +AH+GQKR+SGEP+IIHP+ V  IL ELE+D E+I AG+LHD VEDT ++T + IE EFG
Sbjct: 61  QAHEGQKRKSGEPYIIHPLWVGIILAELEMDKETIVAGILHDAVEDT-IMTRDDIEREFG 119

Query: 218 ATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHN 277
           A V  +VEG   V+KLG+L    +   ++ ++A++LR+MFLAM++++RVIIVKLADRLHN
Sbjct: 120 AEVALLVEG---VTKLGQLSYSKDVDKME-LQAENLRKMFLAMSKDIRVIIVKLADRLHN 175

Query: 278 MRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVA 337
           MRT    PPHKQ   A ET+ ++AP+A+ LG+ +IK EL++L+  Y   E +  + +++ 
Sbjct: 176 MRTAQFWPPHKQKEKARETMDIYAPIAQRLGISKIKKELDDLALKYYQPEVFYDLVKQIN 235

Query: 338 DLYKEHEKELEEANKILMKKIEDD--QFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSIN 395
           D   E E+         +++I D+    +    ++ E+    K  +SIYK ++    +++
Sbjct: 236 DRKTEREE--------FVQQIVDEVASHMKNADIQAEVYGRVKHFFSIYKKMVNQDKTVD 287

Query: 396 EVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGY 455
           +V  +  +RII+               + CY  LG++H ++TPIP   KDYIA PK N Y
Sbjct: 288 QVYDLFAVRIIV------------DTVKDCYAALGVIHEMYTPIPGRFKDYIAMPKANMY 335

Query: 456 QSLHTTLI-----PFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPN 510
           QSLHTTL+     PF        E+QIRT+EM   AE GIAAH+  +             
Sbjct: 336 QSLHTTLMGPAGQPF--------EIQIRTKEMHKTAEYGIAAHWKYK------------- 374

Query: 511 GRSPRGKTVCLNNANIAL----RISWLNAIREWQEEFVGNMTSREFVDTITR--DLLGSR 564
             S  GK       NIA+    ++SWL  I EWQ+    N  +REF+  +    DL    
Sbjct: 375 -ESGDGKK------NIAMQEEEKLSWLRQILEWQQ----NTDNREFLSLLKGGLDLFAED 423

Query: 565 VFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
           V+ FTP G++KNLP G+T +D+AY IH+ +GNKMV A+VNG LV+  + + N + +EI+T
Sbjct: 424 VYCFTPNGDVKNLPNGSTPIDFAYAIHSAVGNKMVGARVNGKLVTIDYKIQNGDRIEILT 483


>gi|256004313|ref|ZP_05429295.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium thermocellum DSM
           2360]
 gi|385778263|ref|YP_005687428.1| (p)ppGpp synthetase I SpoT/RelA [Clostridium thermocellum DSM 1313]
 gi|419722157|ref|ZP_14249305.1| RelA/SpoT family protein [Clostridium thermocellum AD2]
 gi|419724255|ref|ZP_14251323.1| RelA/SpoT family protein [Clostridium thermocellum YS]
 gi|255991747|gb|EEU01847.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium thermocellum DSM
           2360]
 gi|316939943|gb|ADU73977.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium thermocellum DSM
           1313]
 gi|380772261|gb|EIC06113.1| RelA/SpoT family protein [Clostridium thermocellum YS]
 gi|380781728|gb|EIC11378.1| RelA/SpoT family protein [Clostridium thermocellum AD2]
          Length = 724

 Score =  355 bits (910), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 205/493 (41%), Positives = 297/493 (60%), Gaps = 64/493 (12%)

Query: 138 ISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           I   +PN +  L+ +A  L+ EAH GQ+R SG+PFI+HP+EVA IL +LELD  +I AG+
Sbjct: 12  IKKYNPNCDFALIEKAHNLSLEAHKGQQRESGDPFIVHPMEVANILADLELDCTAIVAGI 71

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT+  T E+I E FG  V  +V+G   V+KLGK+    +    ++++A++LR+M
Sbjct: 72  LHDIVEDTSY-TIEQIRENFGDEVANLVDG---VTKLGKIPYTTK----EELQAENLRKM 123

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
           FLAM +++RVI++KLADRLHNMRTL +MPP KQ   A ETL+++APLA  LG+ +IK EL
Sbjct: 124 FLAMAKDIRVILIKLADRLHNMRTLKYMPPEKQIEKAKETLEIYAPLAHRLGISKIKWEL 183

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+L   Y + + Y  +  ++A   +E E  + E  K + +K  +      + +   I   
Sbjct: 184 EDLCLRYLDPKGYYDLVNKIAKKRREREAYISEIIKTIQEKTVE------IGIDAHIEGR 237

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSIY+ +++   +I ++  +  +R+I+            +  + CY VLGLVH I+
Sbjct: 238 PKHFYSIYRKMVQQNKTIEQIYDLFAVRVIV------------TTVKDCYAVLGLVHEIF 285

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMDLIAERGIA 491
            P+P   KDYIA PKPN YQSLHTTLI     PF        EVQIRT EM  +AE GIA
Sbjct: 286 KPMPGRFKDYIAMPKPNMYQSLHTTLIGHEGVPF--------EVQIRTWEMHRVAEVGIA 337

Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
           AH+                 +   GK+      +   +++WL  + EWQ+E      + E
Sbjct: 338 AHW-----------------KYKEGKSA----DDYDNKLAWLRQLLEWQKEM---RDASE 373

Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
           F++T+  DL    VFVFTP+G++ +LP G+T +D+AY IH+ IGNKM  AKVN  +V   
Sbjct: 374 FMETLKIDLFTDEVFVFTPKGDVISLPAGSTPIDFAYAIHSAIGNKMSGAKVNNKIVPID 433

Query: 612 HVLANAEVVEIIT 624
           +VL N ++VEI+T
Sbjct: 434 YVLQNGDIVEILT 446


>gi|442804848|ref|YP_007372997.1| GTP pyrophosphokinase RelA [Clostridium stercorarium subsp.
           stercorarium DSM 8532]
 gi|442740698|gb|AGC68387.1| GTP pyrophosphokinase RelA [Clostridium stercorarium subsp.
           stercorarium DSM 8532]
          Length = 759

 Score =  355 bits (910), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 198/482 (41%), Positives = 295/482 (61%), Gaps = 62/482 (12%)

Query: 148 LVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVV 207
           L+ +A   A  AH+GQKR SGEPF+IHP++VA IL E+E+D  ++ AG+LHDTVED++  
Sbjct: 55  LIEKAYKFACIAHEGQKRSSGEPFVIHPLQVAYILAEMEMDTATVVAGMLHDTVEDSSF- 113

Query: 208 TFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVI 267
           T+E   + FG  +  +V+G   V+KL K+   N+    Q+++A++LR+MFLAM++++RVI
Sbjct: 114 TYENTLKNFGEEIANLVDG---VTKLAKIPYTNK----QEIQAENLRKMFLAMSKDIRVI 166

Query: 268 IVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAE 327
           I+KLADRLHNMRTL + P  KQ  IA ETL ++APLA  LG+Y++K ELE+LSF Y + +
Sbjct: 167 IIKLADRLHNMRTLKYKPREKQIEIAQETLDIYAPLAHRLGIYKVKWELEDLSFRYLHEK 226

Query: 328 DYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAV 387
           +Y  +  ++A   KE E+ +E   K + +K  +      M ++  I    K  YSIY  +
Sbjct: 227 EYYDLAEKIAKKRKEREEYIENIMKTVAEKAME------MGIEAHIDGRPKHLYSIYMKM 280

Query: 388 LKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYI 447
            +    ++++  +  +R+I+            +  + CY VLGLVH ++ P+P   KDYI
Sbjct: 281 KRQHKELDQIYDLFAIRVIV------------NTVKDCYAVLGLVHELYKPMPGRFKDYI 328

Query: 448 ATPKPNGYQSLHTTL-----IPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTG 502
           + PKPN YQSLHTT+     IPF        EVQIRT EM  IAE GIAAH+        
Sbjct: 329 SMPKPNMYQSLHTTVIGPEGIPF--------EVQIRTWEMHRIAEVGIAAHWK------- 373

Query: 503 LVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLG 562
                +  GR          N +++ +++WL  + +WQ+E        EF++ +  DL  
Sbjct: 374 ----YKEGGRQ---------NDDLSEKLAWLRQLLDWQKE---TTDPDEFMENLKIDLFT 417

Query: 563 SRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEI 622
             VFVFTP+G++K L  G+T +D+AY IH++IGN+M+ AKVNG + S  + L N ++VEI
Sbjct: 418 DEVFVFTPKGDVKCLKAGSTPIDFAYAIHSDIGNRMIGAKVNGRIESLDYELKNGDIVEI 477

Query: 623 IT 624
           IT
Sbjct: 478 IT 479


>gi|326390128|ref|ZP_08211689.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacter ethanolicus JW
           200]
 gi|325993776|gb|EGD52207.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacter ethanolicus JW
           200]
          Length = 719

 Score =  354 bits (909), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 200/483 (41%), Positives = 294/483 (60%), Gaps = 62/483 (12%)

Query: 146 LELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTN 205
           LEL+ +A   A  AH+GQ R SGEP+I+HP+EVA IL +LELD  +IAAGLLHD +EDT+
Sbjct: 19  LELIYKAYDFAVNAHEGQMRNSGEPYIVHPIEVAYILADLELDITTIAAGLLHDVIEDTD 78

Query: 206 VVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVR 265
           V T++++ E FG  +  +V+G   V+KLGK++ K    S  + +A+++R+M +AM +++R
Sbjct: 79  V-TYDQLMENFGKEIADLVDG---VTKLGKIEYK----SKVEQQAENMRKMLIAMAKDIR 130

Query: 266 VIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTN 325
           VI++KLADRLHNMRTL ++P  KQ   A ETL+++AP+A  LG+ +IK ELE+L   Y +
Sbjct: 131 VILIKLADRLHNMRTLKYLPLDKQKEKAEETLEIYAPIAHRLGISKIKWELEDLCLRYLH 190

Query: 326 AEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYK 385
            E+Y  +  +VA   KE E+ ++     + +K+++      M ++ E+    K  YSIYK
Sbjct: 191 PEEYYDLVEKVAAKRKEREEFIQNIITTIKEKLKE------MGIQAEVDGRPKHFYSIYK 244

Query: 386 AVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKD 445
            +     +  ++  +  +RII+            +  + CY VLG+VH +W PIP   KD
Sbjct: 245 KMKTQNKTFEQIYDLLAVRIIV------------NTVKDCYGVLGIVHTLWKPIPGRFKD 292

Query: 446 YIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFV 500
           YIA PKPN YQSLHTT+I     PF        E+QIRT EM   AE GIAAH+      
Sbjct: 293 YIAMPKPNMYQSLHTTVIGPKGEPF--------EIQIRTWEMHKTAEYGIAAHW------ 338

Query: 501 TGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDL 560
                      +   GKT          ++SWL  + EWQ+E      ++EF++T+  DL
Sbjct: 339 -----------KYKEGKTT---EDEFDQKLSWLRQLLEWQKEL---KDAKEFMETLKIDL 381

Query: 561 LGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVV 620
               VFVFTP+G++ NLP G+T +D+AY IHTEIG+++  AKVNG +V   + L N ++V
Sbjct: 382 FTDEVFVFTPKGDVINLPAGSTPIDFAYSIHTEIGHRLNGAKVNGKIVPINYQLKNGDIV 441

Query: 621 EII 623
           EI+
Sbjct: 442 EIL 444


>gi|392941128|ref|ZP_10306772.1| LOW QUALITY PROTEIN: (p)ppGpp synthetase, RelA/SpoT family
           [Thermoanaerobacter siderophilus SR4]
 gi|392292878|gb|EIW01322.1| LOW QUALITY PROTEIN: (p)ppGpp synthetase, RelA/SpoT family
           [Thermoanaerobacter siderophilus SR4]
          Length = 719

 Score =  354 bits (909), Expect = 8e-95,   Method: Compositional matrix adjust.
 Identities = 200/483 (41%), Positives = 294/483 (60%), Gaps = 62/483 (12%)

Query: 146 LELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTN 205
           LEL+ +A   A  AH+GQ R SGEP+I+HP+EVA IL +LELD  +IAAGLLHD +EDT+
Sbjct: 19  LELIYKAYDFAVNAHEGQMRNSGEPYIVHPIEVAYILADLELDITTIAAGLLHDVIEDTD 78

Query: 206 VVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVR 265
           V T++++ E FG  +  +V+G   V+KLGK++ K    S  + +A+++R+M +AM +++R
Sbjct: 79  V-TYDQLMENFGKEIADLVDG---VTKLGKIEYK----SKVEQQAENMRKMLIAMAKDIR 130

Query: 266 VIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTN 325
           VI++KLADRLHNMRTL ++P  KQ   A ETL+++AP+A  LG+ +IK ELE+L   Y +
Sbjct: 131 VILIKLADRLHNMRTLKYLPLDKQKEKAEETLEIYAPIAHRLGISKIKWELEDLCLRYLH 190

Query: 326 AEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYK 385
            E+Y  +  +VA   KE E+ ++     + +K+++      M ++ E+    K  YSIYK
Sbjct: 191 PEEYYDLVEKVAAKRKEREEFIQNIITTIKEKLKE------MGIQAEVDGRPKHFYSIYK 244

Query: 386 AVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKD 445
            +     +  ++  +  +RII+            +  + CY VLG+VH +W PIP   KD
Sbjct: 245 KMKTQNKTFEQIYDLLAVRIIV------------NTVKDCYGVLGIVHTLWKPIPGRFKD 292

Query: 446 YIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFV 500
           YIA PKPN YQSLHTT+I     PF        E+QIRT EM   AE GIAAH+      
Sbjct: 293 YIAMPKPNMYQSLHTTVIGPKGEPF--------EIQIRTWEMHKTAEYGIAAHW------ 338

Query: 501 TGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDL 560
                      +   GKT          ++SWL  + EWQ+E      ++EF++T+  DL
Sbjct: 339 -----------KYKEGKT---TEDEFDQKLSWLRQLLEWQKEL---KDAKEFMETLKIDL 381

Query: 561 LGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVV 620
               VFVFTP+G++ NLP G+T +D+AY IHTEIG+++  AKVNG +V   + L N ++V
Sbjct: 382 FTDEVFVFTPKGDVINLPAGSTPIDFAYSIHTEIGHRLNGAKVNGKIVPINYQLKNGDIV 441

Query: 621 EII 623
           EI+
Sbjct: 442 EIL 444


>gi|345023332|ref|ZP_08786945.1| GTP pyrophosphokinase [Ornithinibacillus scapharcae TW25]
          Length = 732

 Score =  354 bits (909), Expect = 8e-95,   Method: Compositional matrix adjust.
 Identities = 200/491 (40%), Positives = 293/491 (59%), Gaps = 49/491 (9%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           SYLS  ++  + RA   A +AH+GQ R+SGE +IIHP++VA IL +L++D E+IA G LH
Sbjct: 18  SYLSEEDIHFIIRAYQYAEKAHEGQFRKSGEAYIIHPIQVAGILVDLKMDPETIAGGFLH 77

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT++ T E IEEEF   V  +V+G   V+KLGK+K K    S +  +A++ R+MF+
Sbjct: 78  DVVEDTDI-TLEMIEEEFNKEVAMLVDG---VTKLGKIKYK----SKEAQQAENHRKMFV 129

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM +++RVI++KLADRLHNMRTL H+PP KQ   A ETL++FAPLA  LG+  IK ELE+
Sbjct: 130 AMAKDIRVILIKLADRLHNMRTLKHLPPEKQRIKANETLEIFAPLAHRLGISTIKWELED 189

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
            +  Y N + Y     R+  L K+   +       +++++ D   L+ + ++ EI    K
Sbjct: 190 TALRYLNPQQYY----RIVQLMKQKRDQRVSYIDEVIQEVSDQ--LEELNIEAEISGRPK 243

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIY+ ++K     NE+  +  +R+            L +  + CY VLG++H  W P
Sbjct: 244 HLYSIYQKMVKQNKQFNEIYDLLAVRV------------LVNSIKDCYAVLGIIHTCWKP 291

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PK N YQSLHTT+I    +    LEVQIRT+EM  IAE GIAAH++ + 
Sbjct: 292 MPGRFKDYIAMPKQNLYQSLHTTVIGPKGDP---LEVQIRTKEMHEIAEYGIAAHWAYK- 347

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                            GK +  +      ++SW   I EWQ E      + EFV+++  
Sbjct: 348 ----------------EGKQINNDKKTFEEKLSWFREILEWQNE---THDAEEFVESLKI 388

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           DL    V+VFTP+G++  LP G+  +D+AY IHTEIGN+ + AK+NG +    + L N +
Sbjct: 389 DLFSDMVYVFTPKGDVIELPSGSIPLDFAYRIHTEIGNQTIGAKINGKMEPLDYQLKNGD 448

Query: 619 VVEIITYNVSF 629
           ++E++T   S+
Sbjct: 449 IIEVLTSKHSY 459


>gi|326791627|ref|YP_004309448.1| (p)ppGpp synthetase I SpoT/RelA [Clostridium lentocellum DSM 5427]
 gi|326542391|gb|ADZ84250.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium lentocellum DSM 5427]
          Length = 743

 Score =  354 bits (908), Expect = 8e-95,   Method: Compositional matrix adjust.
 Identities = 207/503 (41%), Positives = 301/503 (59%), Gaps = 50/503 (9%)

Query: 127 PERLWEDLRPTI-SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGEL 185
           P+ ++E L   I SY   + LE+V RA  LA  AH+ Q R+SGEP+IIHP+EVA  L +L
Sbjct: 2   PDEIYERLIKKIRSYHPSDNLEMVERAYQLAKSAHESQLRKSGEPYIIHPLEVACNLADL 61

Query: 186 ELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSV 245
           ELD ESI AGLLHD VEDT+  T E IE  F   V  +V+G   V+KLGK++   +N  +
Sbjct: 62  ELDIESIVAGLLHDVVEDTDY-TLEDIERLFNKEVALLVDG---VTKLGKIQYSAQNKQL 117

Query: 246 Q--DVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPL 303
           Q  +++A++ R+MFLAM +++RV+++KLADRLHNM+TL  M P KQ  IA ETL ++AP+
Sbjct: 118 QKEEIQAENYRKMFLAMAQDIRVVLIKLADRLHNMQTLKFMTPAKQKEIAEETLNIYAPI 177

Query: 304 AKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQF 363
           A  LG+ +IK++LE+LS  Y   E Y ++  +++    E  + +E   + + +K+     
Sbjct: 178 AHRLGICKIKADLEDLSLRYMEPEVYYELAHQISSKRMERIQYIEHIVQQIKEKV----- 232

Query: 364 LDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQ 423
                ++  I    K  +SIYK ++    +++++  +  +R I+K              +
Sbjct: 233 -SAAGIEAVIEGRPKHFFSIYKKIVNKNKTLDQIYDLFAVRAIVK------------SVK 279

Query: 424 ICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMD 483
            CY VLG++H ++TPIP   KDYIA PKPN Y+SLHTTL+    E     E+QIRTEEM 
Sbjct: 280 DCYGVLGIIHEMYTPIPGRFKDYIAMPKPNMYRSLHTTLMG---EEGTPFEMQIRTEEMH 336

Query: 484 LIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEF 543
             AE GIAAH+                 +   GKT          +++WL  I EWQ + 
Sbjct: 337 RTAEYGIAAHW-----------------KYKEGKTDQGTQDKSEEKLTWLREILEWQRDM 379

Query: 544 VGNMTSREFVDTITRDL--LGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAA 601
             N   +EF+  +  DL   G +V+VFTP GE+  LPKG+T +D+AY IH+ +GNKM+ A
Sbjct: 380 SDN---QEFMSALKGDLDVYGDQVYVFTPSGELLTLPKGSTPIDFAYHIHSGVGNKMIGA 436

Query: 602 KVNGNLVSPTHVLANAEVVEIIT 624
           KVNG +V+  +VL N + VEI+T
Sbjct: 437 KVNGKIVTIDYVLKNGDRVEILT 459


>gi|167037441|ref|YP_001665019.1| (p)ppGpp synthetase I SpoT/RelA [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|320115854|ref|YP_004186013.1| RelA/SpoT family protein [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
 gi|166856275|gb|ABY94683.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|319928945|gb|ADV79630.1| RelA/SpoT family protein [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
          Length = 719

 Score =  354 bits (908), Expect = 9e-95,   Method: Compositional matrix adjust.
 Identities = 200/483 (41%), Positives = 294/483 (60%), Gaps = 62/483 (12%)

Query: 146 LELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTN 205
           LEL+ +A   A  AH+GQ R SGEP+I+HP+EVA IL +LELD  +IAAGLLHD +EDT+
Sbjct: 19  LELIYKAYDFAVNAHEGQMRNSGEPYIVHPIEVAFILADLELDITTIAAGLLHDVIEDTD 78

Query: 206 VVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVR 265
           V T++++ E FG  +  +V+G   V+KLGK++ K    S  + +A+++R+M +AM +++R
Sbjct: 79  V-TYDQLMENFGKEIADLVDG---VTKLGKIEYK----SKVEQQAENMRKMLIAMAKDIR 130

Query: 266 VIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTN 325
           VI++KLADRLHNMRTL ++P  KQ   A ETL+++AP+A  LG+ +IK ELE+L   Y +
Sbjct: 131 VILIKLADRLHNMRTLKYLPLDKQKEKAEETLEIYAPIAHRLGISKIKWELEDLCLRYLH 190

Query: 326 AEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYK 385
            E+Y  +  +VA   KE E+ ++     + +K+++      M ++ E+    K  YSIYK
Sbjct: 191 PEEYYDLVEKVAAKRKEREEFIQNIITTIKEKLKE------MGIQAEVDGRPKHFYSIYK 244

Query: 386 AVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKD 445
            +     +  ++  +  +RII+            +  + CY VLG+VH +W PIP   KD
Sbjct: 245 KMKTQNKTFEQIYDLLAVRIIV------------NTVKDCYGVLGIVHTLWKPIPGRFKD 292

Query: 446 YIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFV 500
           YIA PKPN YQSLHTT+I     PF        E+QIRT EM   AE GIAAH+      
Sbjct: 293 YIAMPKPNMYQSLHTTVIGPKGEPF--------EIQIRTWEMHKTAEYGIAAHW------ 338

Query: 501 TGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDL 560
                      +   GKT          ++SWL  + EWQ+E      ++EF++T+  DL
Sbjct: 339 -----------KYKEGKT---TEDEFDQKLSWLRQLLEWQKEL---KDAKEFMETLKIDL 381

Query: 561 LGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVV 620
               VFVFTP+G++ NLP G+T +D+AY IHTEIG+++  AKVNG +V   + L N ++V
Sbjct: 382 FTDEVFVFTPKGDVINLPAGSTPIDFAYSIHTEIGHRLNGAKVNGKIVPINYQLKNGDIV 441

Query: 621 EII 623
           EI+
Sbjct: 442 EIL 444


>gi|345017525|ref|YP_004819878.1| (p)ppGpp synthetase I SpoT/RelA [Thermoanaerobacter wiegelii
           Rt8.B1]
 gi|344032868|gb|AEM78594.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacter wiegelii
           Rt8.B1]
          Length = 719

 Score =  354 bits (908), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 200/483 (41%), Positives = 294/483 (60%), Gaps = 62/483 (12%)

Query: 146 LELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTN 205
           LEL+ +A   A  AH+GQ R SGEP+I+HP+EVA IL +LELD  +IAAGLLHD +EDT+
Sbjct: 19  LELIYKAYDFAVNAHEGQMRNSGEPYIVHPIEVAFILADLELDITTIAAGLLHDVIEDTD 78

Query: 206 VVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVR 265
           V T++++ E FG  +  +V+G   V+KLGK++ K    S  + +A+++R+M +AM +++R
Sbjct: 79  V-TYDQLMENFGKEIADLVDG---VTKLGKIEYK----SKVEQQAENMRKMLIAMAKDIR 130

Query: 266 VIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTN 325
           VI++KLADRLHNMRTL ++P  KQ   A ETL+++AP+A  LG+ +IK ELE+L   Y +
Sbjct: 131 VILIKLADRLHNMRTLKYLPLDKQKEKAEETLEIYAPIAHRLGISKIKWELEDLCLRYLH 190

Query: 326 AEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYK 385
            E+Y  +  +VA   KE E+ ++     + +K+++      M ++ E+    K  YSIYK
Sbjct: 191 PEEYYDLVEKVAAKRKEREEFIQNIITTIKEKLKE------MGIQAEVDGRPKHFYSIYK 244

Query: 386 AVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKD 445
            +     +  ++  +  +RII+            +  + CY VLG+VH +W PIP   KD
Sbjct: 245 KMKTQNKTFEQIYDLLAVRIIV------------NTVKDCYGVLGIVHTLWKPIPGRFKD 292

Query: 446 YIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFV 500
           YIA PKPN YQSLHTT+I     PF        E+QIRT EM   AE GIAAH+      
Sbjct: 293 YIAMPKPNMYQSLHTTVIGPKGEPF--------EIQIRTWEMHKTAEYGIAAHW------ 338

Query: 501 TGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDL 560
                      +   GKT          ++SWL  + EWQ+E      ++EF++T+  DL
Sbjct: 339 -----------KYKEGKT---TEDEFDQKLSWLRQLLEWQKEL---KDAKEFMETLKIDL 381

Query: 561 LGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVV 620
               VFVFTP+G++ NLP G+T +D+AY IHTEIG+++  AKVNG +V   + L N ++V
Sbjct: 382 FTDEVFVFTPKGDVINLPAGSTPIDFAYSIHTEIGHRLNGAKVNGKIVPINYQLKNGDIV 441

Query: 621 EII 623
           EI+
Sbjct: 442 EIL 444


>gi|381210458|ref|ZP_09917529.1| GTP pyrophosphokinase [Lentibacillus sp. Grbi]
          Length = 733

 Score =  354 bits (908), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 199/490 (40%), Positives = 291/490 (59%), Gaps = 49/490 (10%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           YL   +   + RA   A +AH  Q R+SGEP+I+HPV+VA IL +LE+D  +IA G LHD
Sbjct: 19  YLLEEDAVFLHRAYEFAEDAHKDQFRKSGEPYIVHPVQVAGILVDLEMDPVTIAGGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            VEDT V T E++E+ F   V  +V+G   V+KLGK+K K    S + ++A++ R+MF+A
Sbjct: 79  VVEDTEV-TLEQLEDSFNEEVAMLVDG---VTKLGKIKYK----SKEALQAENHRKMFVA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M  ++RVI++KLADRLHNMRTL H+PP+KQ  I+ ETL++FAPLA  LG+  IK ELE+ 
Sbjct: 131 MARDIRVILIKLADRLHNMRTLKHLPPNKQRRISNETLEIFAPLAHRLGISTIKWELEDT 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           +  Y N + Y ++ + +    +E E  ++E    L K+++D      + ++ +I    K 
Sbjct: 191 ALRYLNPQQYYRIVQLMKQKREERETYIDEVIDELEKQLDD------VNIEADISGRPKH 244

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIY+ + K     NE+  +  +RI            L    + CY VLG++H  W P+
Sbjct: 245 LYSIYRKMAKQNKQFNEIYDLLAVRI------------LVHSIKDCYAVLGIIHTCWKPM 292

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PKPN YQSLHTT+I    +    LEVQIRT+EM  IAE GIAAH++ +  
Sbjct: 293 PGRFKDYIAMPKPNLYQSLHTTVIGPKGDP---LEVQIRTKEMHEIAEYGIAAHWAYK-- 347

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
                           GK +   + +   R++W   I +WQ E      + EF++T+  D
Sbjct: 348 ---------------EGKQLAKGSKSFEDRLTWFREILDWQSE---THDAEEFMETLKVD 389

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           L    V+VFTP+G++  LP G+  +D+AY IHTE+GNK + AKVNG +    + L N ++
Sbjct: 390 LFSDMVYVFTPKGDVIELPSGSVPLDFAYRIHTEVGNKTIGAKVNGKMEPLDYQLKNGDI 449

Query: 620 VEIITYNVSF 629
           VE++T   S+
Sbjct: 450 VEVMTSKHSY 459


>gi|27262490|gb|AAN87526.1| GTP pyrophosphokinase [Heliobacillus mobilis]
          Length = 734

 Score =  353 bits (907), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 199/481 (41%), Positives = 286/481 (59%), Gaps = 51/481 (10%)

Query: 144 NELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVED 203
           ++LE VRR    A  AH GQ R+SGEP+I HP+ VA IL +LELD  +IAAGLLHD VED
Sbjct: 20  SDLEFVRRDFQYADVAHTGQLRKSGEPYIYHPLAVAFILADLELDMATIAAGLLHDVVED 79

Query: 204 TNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEE 263
           T + T E +E+EFG  V  +V+G TK+S+L       E  S Q+ + + LR+MFLAM ++
Sbjct: 80  TPI-TLEELEKEFGPEVALLVDGVTKLSRL-------EVRSKQEQQVESLRKMFLAMAKD 131

Query: 264 VRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMY 323
           +RVI++KLADRLHNMRTL H  P KQ  IA ET+++FAPLA  LG+ +IK ELE+LS  Y
Sbjct: 132 IRVILIKLADRLHNMRTLRHQKPEKQREIAEETIELFAPLANRLGISRIKWELEDLSLRY 191

Query: 324 TNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSI 383
              E Y  + +R+A    E E+ + +  + L +K+E       + VK +I    K  YSI
Sbjct: 192 LEPETYYDLVQRIATKRAEREERINDIIRELSEKLE------AVGVKADISGRPKHFYSI 245

Query: 384 YKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAM 443
           Y+ +   +  ++E+  +  +R+            L    + CY  LG++H IW PIP   
Sbjct: 246 YRKMTNQKKDLSEIYDLIAVRV------------LVDSVKDCYGALGIIHTIWKPIPMRF 293

Query: 444 KDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGL 503
           KDYIATPK N YQSLHTTL+  + E     EVQIRT EM   AE GIAAH+         
Sbjct: 294 KDYIATPKTNMYQSLHTTLVGPMGEP---FEVQIRTFEMHRTAEYGIAAHWK-------- 342

Query: 504 VGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGS 563
               +  G+S               +++WL  ++EWQ E      ++ F++++  +    
Sbjct: 343 ---YKEGGKS--------QGTGFEEKLAWLRQLQEWQSE---QKDTQTFMESLKIEFFSD 388

Query: 564 RVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEII 623
            VF+FTP+G++  LP G+T +D+AY IH+ +G++ + AKVNG +V   + L+N E++EI+
Sbjct: 389 AVFIFTPKGDVIELPAGSTPIDFAYRIHSNVGHRCMGAKVNGRIVPIDYKLSNGEIIEIL 448

Query: 624 T 624
           T
Sbjct: 449 T 449


>gi|260437936|ref|ZP_05791752.1| GTP diphosphokinase [Butyrivibrio crossotus DSM 2876]
 gi|292809687|gb|EFF68892.1| GTP diphosphokinase [Butyrivibrio crossotus DSM 2876]
          Length = 762

 Score =  353 bits (907), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 204/504 (40%), Positives = 300/504 (59%), Gaps = 57/504 (11%)

Query: 127 PERLWEDLRPTI-SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGEL 185
           P  L+E L+ +I  Y    +L L+ +A  +A +AH GQKR+SGEP+IIHP+ VA IL +L
Sbjct: 25  PSELFEILKKSILDYHPSTDLSLIEKAYKVADKAHSGQKRKSGEPYIIHPLCVAIILAQL 84

Query: 186 ELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSV 245
           ELD E+I AG+LHD +EDT V T+E I  EFG  V  +V+G TK+++L      N  H  
Sbjct: 85  ELDKETIIAGILHDVIEDTEV-TYEDISREFGEEVALLVDGVTKLTQL------NYEHDK 137

Query: 246 QDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAK 305
            +++A++LR+MFLAM +++RVI++KLADRLHNMRT+ +  P KQ   + ET+++++P+A+
Sbjct: 138 IEIQAENLRKMFLAMAKDIRVILIKLADRLHNMRTMQYQKPEKQIEKSRETMEIYSPIAQ 197

Query: 306 LLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKEL-EEANKILMKKI--EDDQ 362
            LG+ +IK EL++LS MY   + Y K+         EH+  L +EA +  +K+I  E  +
Sbjct: 198 RLGISKIKVELDDLSLMYLQPDVYHKL---------EHDLTLGKEARENFVKEIVAEVKE 248

Query: 363 FLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQ 422
            L    +   I    K  +SIYK ++    +++++  +  +RII+               
Sbjct: 249 KLSTTGINYTIDGRVKHFFSIYKKMVNQDKTLDQIYDLFAVRIIV------------DTI 296

Query: 423 QICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEM 482
           + CY VLGL+H ++ PIP   KDYIA PKPN YQSLHTTLI    ++    E+QIRT EM
Sbjct: 297 KDCYAVLGLIHEMYKPIPGRFKDYIAMPKPNMYQSLHTTLIS---QTGQPFEIQIRTYEM 353

Query: 483 DLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEE 542
              AE GIAAH+  +  + G  G                       +++WL  I EWQ +
Sbjct: 354 HRTAEYGIAAHWKYKENIDGTKGDDSEEA-----------------KLTWLRQILEWQRD 396

Query: 543 FVGNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVA 600
              N   +EF+  I    DL    V+ FTP+G++KNLP G+T +D+AY IH+ +GNKMV 
Sbjct: 397 MSDN---KEFLSIIKSDLDLFSDSVYCFTPQGDVKNLPAGSTPIDFAYSIHSAVGNKMVG 453

Query: 601 AKVNGNLVSPTHVLANAEVVEIIT 624
           AKVNG LV   + + N + +E+IT
Sbjct: 454 AKVNGKLVPIDYKIKNGDRIEVIT 477


>gi|204789670|gb|ACI02046.1| hypothetical protein [uncultured bacterium]
          Length = 742

 Score =  353 bits (906), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 208/509 (40%), Positives = 302/509 (59%), Gaps = 65/509 (12%)

Query: 126 SPERLWEDLRPTISYLSP-NELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
           SPE L+ DL   +    P +++ L+ +A  +A +AH  Q R+SGEP+I+HP+ VA IL +
Sbjct: 6   SPEELYRDLIERVQKYHPSDDITLIEKAYNIASKAHAKQLRKSGEPYIVHPLCVAIILAD 65

Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
           L+LD ESI AGLLHD VEDT V+T E IE EFG  V  IV+G   V+KL K+K  N+   
Sbjct: 66  LQLDKESIVAGLLHDVVEDT-VMTDEDIEREFGPDVALIVDG---VTKLEKIKYNNDKLE 121

Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
            Q   A++LR+MF+AM +++RVI+VKLADRLHNMRTLSH P  KQ  IA ET+ ++APLA
Sbjct: 122 YQ---AENLRRMFIAMAKDIRVIMVKLADRLHNMRTLSHQPEAKQKEIAKETMDIYAPLA 178

Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDD--Q 362
           + LG+ ++K EL++LS  Y   E Y  +  ++A       K + EA    ++ I D+  +
Sbjct: 179 QRLGISKVKVELDDLSLKYLEPEVYRDLVDKIA-----VRKSVREA---FVQDIVDEVAE 230

Query: 363 FLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQ 422
            +    +K +I    K  +SIY+ +L    S++++  +  +RII+               
Sbjct: 231 AISAAGIKAQIDGRVKHFFSIYRKMLNQDKSLDQIYDLFAVRIIV------------DSI 278

Query: 423 QICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQI 477
           + CY  LG++H I+ PIP   KDYIA PKPN YQSLHTTL+     PF        E+QI
Sbjct: 279 KDCYAALGIIHEIYKPIPGRFKDYIAMPKPNMYQSLHTTLVGKTGTPF--------EIQI 330

Query: 478 RTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIR 537
           RT +M   AE GIAAH+  +               +  G  +  + A    ++SWL  I 
Sbjct: 331 RTYDMHRTAEYGIAAHWKYK--------------EASNGNIIKESEAE---KMSWLQQIL 373

Query: 538 EWQEEFVGNMTSREFVDTITRDL--LGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIG 595
           +WQ++   N   +EF+ ++  DL      V+VFTP G++K LP G+T +D+AY +HT +G
Sbjct: 374 DWQKDMSDN---KEFLSSVKTDLDVYSDTVYVFTPTGDVKTLPAGSTPIDFAYSVHTAVG 430

Query: 596 NKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
           NKMV A+VNG +V   ++L N + VE++T
Sbjct: 431 NKMVGARVNGQMVKNDYILQNGDRVEVVT 459


>gi|225874445|ref|YP_002755904.1| GTP pyrophosphokinase [Acidobacterium capsulatum ATCC 51196]
 gi|225792335|gb|ACO32425.1| GTP pyrophosphokinase [Acidobacterium capsulatum ATCC 51196]
          Length = 747

 Score =  353 bits (906), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 202/494 (40%), Positives = 296/494 (59%), Gaps = 57/494 (11%)

Query: 133 DLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESI 192
           D RP+      ++L+++RRA     E H GQ R SGEPF++HP+EVA +L E++LD  +I
Sbjct: 32  DNRPS------DDLDIIRRAWDFCLEHHQGQFRASGEPFVLHPLEVALVLAEMKLDSTAI 85

Query: 193 AAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADD 252
           AAGLLHD VEDT V   + I  +FG  V  IVEG   V+K+ K++  N     +D +A++
Sbjct: 86  AAGLLHDAVEDTPVTAAD-IANQFGEQVAHIVEG---VTKIDKIQFANR----EDRQAEN 137

Query: 253 LRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQI 312
           +R+M LAM  +VRV+++KLADRLHNMRTL H+   +Q +IA ETL ++APLA  LGM ++
Sbjct: 138 VRKMLLAMVTDVRVVLIKLADRLHNMRTLEHLSAERQQAIARETLDIYAPLAHRLGMGKL 197

Query: 313 KSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTE 372
           + ELE+LSF Y +   Y +++  V +   E E+ L     +L++K+++++    +T + +
Sbjct: 198 RGELEDLSFRYVDPYSYDQLQLAVEERRSEGEQFLAGVEALLLEKLKENK----ITARVQ 253

Query: 373 IRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLV 432
            R   K  +SI+  + KSR S++++  +  LR+I    P             CY VLGL+
Sbjct: 254 WR--IKRLFSIHSKLQKSRSSVDQLYDLLALRVITNSVPD------------CYAVLGLI 299

Query: 433 HGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAA 492
           H IW P+P  +KD+IA P+PN YQSLHTT+   + E   + EVQIRTEEM  +AE GIAA
Sbjct: 300 HSIWRPVPGRIKDFIAMPRPNMYQSLHTTV---MGEGGHQFEVQIRTEEMHRVAEEGIAA 356

Query: 493 HYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREF 552
           H+  +             G SP        +A    R++W+  + EWQ E        EF
Sbjct: 357 HWKYKA------------GNSP-------ISARDEQRLAWVRQLVEWQREMT---DPNEF 394

Query: 553 VDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTH 612
           + T+  DL    V+ FTP+G++  LPK A+ +D+AY IHTE+G+    AKVNG +V    
Sbjct: 395 LSTLKIDLYPEEVYTFTPKGKVVVLPKDASPLDFAYSIHTEVGHSCTGAKVNGRMVPLRS 454

Query: 613 VLANAEVVEIITYN 626
            L N +VVE+IT N
Sbjct: 455 KLRNGDVVEVITQN 468


>gi|298529911|ref|ZP_07017313.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfonatronospira thiodismutans
           ASO3-1]
 gi|298509285|gb|EFI33189.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfonatronospira thiodismutans
           ASO3-1]
          Length = 720

 Score =  353 bits (906), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 203/496 (40%), Positives = 300/496 (60%), Gaps = 50/496 (10%)

Query: 129 RLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
           R+ E L     YLS  +  L+++A + +  AH GQ R SGEP++ HP+EV+ +L +L LD
Sbjct: 3   RINEILDKVSGYLSGPDQALIQKAYVFSASAHAGQIRLSGEPYLSHPLEVSDMLADLHLD 62

Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
            ++IAAGLLHDTVEDT   + E + ++FG  V RIV+G TK+ K+          S ++ 
Sbjct: 63  ADTIAAGLLHDTVEDTKA-SLEEVRDQFGEEVARIVKGVTKIGKMS-------FDSKEEA 114

Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
           +A+++R+M LAM +++RVI+VKLADRLHNM+TL H    KQ ++A ET+ ++APLA  LG
Sbjct: 115 QAENIRKMILAMADDIRVILVKLADRLHNMKTLEHQSSFKQKAVAQETMDIYAPLANRLG 174

Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
           +Y++K +LE+LS  Y   + Y +++  V       E+ +++    + + IE  + L+  +
Sbjct: 175 LYRLKIQLEDLSLRYMKPDVYFQIQEGVNKQKVVGEQYIQK----VCQNIE--EILEQNS 228

Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
           ++  +    K  YSIY  +++   S+++V  I   R++++              + CY V
Sbjct: 229 IEGRVSGRMKHIYSIYHKMVQQGLSLDQVFDIIAFRVLVQSI------------KDCYAV 276

Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAER 488
           LGLVH IW P+P   KDYI+ PK N YQSLHTT+I    E   R+E+QIRTEEM  +AE 
Sbjct: 277 LGLVHSIWKPVPGRFKDYISMPKANMYQSLHTTVIGPDGE---RIEIQIRTEEMHKMAEF 333

Query: 489 GIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMT 548
           G+A+H+             + +G++ R K         A R SWL  I +WQEE      
Sbjct: 334 GVASHW-----------RYKEDGKN-RFKD------KDAERFSWLRQILDWQEEL---KD 372

Query: 549 SREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLV 608
            REF+ ++  DL    V+VFTPRGE+K LP+GAT +D+AYMIHTE+G++   AKVNG LV
Sbjct: 373 PREFMASLRFDLFEDEVYVFTPRGEVKELPEGATPIDFAYMIHTEVGDRCAGAKVNGKLV 432

Query: 609 SPTHVLANAEVVEIIT 624
               VL N + VEIIT
Sbjct: 433 PLNTVLKNGDTVEIIT 448


>gi|404497180|ref|YP_006721286.1| GTP/GDP 3'-pyrophosphokinase and (p)ppGpp 3'-pyrophosphohydrolase
           [Geobacter metallireducens GS-15]
 gi|418066658|ref|ZP_12704018.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacter metallireducens RCH3]
 gi|78194783|gb|ABB32550.1| GTP/GDP 3'-pyrophosphokinase and (p)ppGpp 3'-pyrophosphohydrolase
           [Geobacter metallireducens GS-15]
 gi|373560151|gb|EHP86423.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacter metallireducens RCH3]
          Length = 716

 Score =  353 bits (906), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 207/497 (41%), Positives = 294/497 (59%), Gaps = 54/497 (10%)

Query: 129 RLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
           RL + L    SY    +L+LVR+A +   + H GQ R SGEP+++HP+EVA +L +L LD
Sbjct: 3   RLNDILDKVGSYNPAPDLDLVRKAYVYCAKVHQGQTRLSGEPYLVHPMEVAGLLADLRLD 62

Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
             ++  GLLHDT+EDT + T E +E  FGA V  +V+G TK+SK+   K K E+      
Sbjct: 63  VPTVVTGLLHDTIEDT-LTTREELEGLFGAEVANLVDGVTKISKI-HFKTKEES------ 114

Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
           +A++ R+M LAM  ++RVI+VKLADRLHNMRTL + P  KQ SIA ETL ++AP+A  LG
Sbjct: 115 QAENFRKMLLAMANDIRVILVKLADRLHNMRTLQYQPEPKQRSIARETLDIYAPIANRLG 174

Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKK-IEDDQFLDLM 367
           +  IKSELE+LSF Y   + Y  +  +V    KE E  ++E  KI++ K +E D      
Sbjct: 175 ISWIKSELEDLSFRYLEPQIYYDLASKVTKKKKERESYVDEVRKIIVDKLVEHD------ 228

Query: 368 TVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYH 427
            +K E+    K  YSI++ +      I+++  +  +R+++            +  + CY 
Sbjct: 229 -IKGEVFGRSKHLYSIWRKMQSRSVDIDQIYDLIAIRVMV------------NDIRECYE 275

Query: 428 VLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAE 487
           VLGL+H  W PIP   KDYIA PK N YQSLHTT+I    E   R+EVQIRT +M  +AE
Sbjct: 276 VLGLIHSTWKPIPGRFKDYIAMPKGNMYQSLHTTVIGPHGE---RMEVQIRTYDMHGVAE 332

Query: 488 RGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNM 547
            GIAAH+  +             G+    K V         R +WL  + EWQ+E     
Sbjct: 333 AGIAAHWKYK------------EGKGYDEKEVK--------RFAWLRQLLEWQQEL---Q 369

Query: 548 TSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNL 607
            S EF+ T+  +L    V+VFTP G++K+ PKG+T +D+AY IHT++G++ V AKVNG L
Sbjct: 370 DSHEFMSTVKVELFPEEVYVFTPNGDVKSFPKGSTPIDFAYTIHTDLGHRCVGAKVNGKL 429

Query: 608 VSPTHVLANAEVVEIIT 624
           V   + L N ++VE+IT
Sbjct: 430 VPLKYELKNGDIVEVIT 446


>gi|258405012|ref|YP_003197754.1| (p)ppGpp synthetase I SpoT/RelA [Desulfohalobium retbaense DSM
           5692]
 gi|257797239|gb|ACV68176.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfohalobium retbaense DSM
           5692]
          Length = 733

 Score =  353 bits (906), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 205/496 (41%), Positives = 291/496 (58%), Gaps = 52/496 (10%)

Query: 129 RLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
           R+ + L    +YL  +E  L+++A + +  AH GQ+R SGEP++ HP+EVA IL EL LD
Sbjct: 3   RINDILEKVSAYLPKSEQALIQKAYVFSASAHAGQRRLSGEPYLSHPLEVAHILAELRLD 62

Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
             +IAAGLLHDT+EDT       +EE+FG  V +IVEG   V+K+GK++      S ++ 
Sbjct: 63  APTIAAGLLHDTLEDTQS-NVSDLEEQFGEEVAQIVEG---VTKIGKVRFT----SKEEA 114

Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
           +A+++R+M LAM E++RVIIVKLADRLHNMRTL H    KQ  I+ ET++++APLA  LG
Sbjct: 115 QAENIRKMILAMAEDIRVIIVKLADRLHNMRTLQHQKGIKQRLISQETMEIYAPLANRLG 174

Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
           +Y++K +LE++SF Y   + Y ++K  V       ++ +E    ++         LD  +
Sbjct: 175 LYRVKVQLEDISFQYLRPDVYYQIKSGVEQHQTLGQQYIERVTGLIQS------ILDENS 228

Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
           +   +    K  YSI+  + +   S+++V+ +   R+I+K              + CY V
Sbjct: 229 IPGRVSGRQKHLYSIFHKMQRQGLSLDQVHDLVAFRVILKSV------------RDCYAV 276

Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAER 488
           LGL+H IW P+P   KDYI+ PK N YQSLHTT+I    E   R+E+QIRTEEM  I E 
Sbjct: 277 LGLIHSIWKPVPGRFKDYISMPKANMYQSLHTTVIGPDGE---RIEIQIRTEEMHEINEY 333

Query: 489 GIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMT 548
           GIAAH+                 +   G  +   +A+   R  WL  I +WQ+E      
Sbjct: 334 GIAAHW-----------------KYKDGSNLSERDAD---RFRWLRQILDWQKEL---KD 370

Query: 549 SREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLV 608
            REF+ ++  DL    V+VFTPRGE++ LP  AT VD+AYMIHTE+GN    AKVNG LV
Sbjct: 371 PREFMASLRFDLFQDEVYVFTPRGEVRELPDEATPVDFAYMIHTEVGNHCAGAKVNGKLV 430

Query: 609 SPTHVLANAEVVEIIT 624
                L N + VEIIT
Sbjct: 431 PLDTALKNGDTVEIIT 446


>gi|428772185|ref|YP_007163973.1| (p)ppGpp synthetase I SpoT/RelA [Cyanobacterium stanieri PCC 7202]
 gi|428686464|gb|AFZ46324.1| (p)ppGpp synthetase I, SpoT/RelA [Cyanobacterium stanieri PCC 7202]
          Length = 747

 Score =  353 bits (905), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 198/485 (40%), Positives = 283/485 (58%), Gaps = 47/485 (9%)

Query: 142 SPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTV 201
            PN   L+ +A   A++ H+GQ R+SGE +IIHP+ VA +L +L  D E IAAG LHD V
Sbjct: 30  DPNN-SLICKAFEYAYKLHEGQYRKSGEAYIIHPIAVAELLRDLGGDAEMIAAGFLHDVV 88

Query: 202 EDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMT 261
           ED   +T + IEE FG+ VR++VE  TK+SK      K E       +A++ R+MFLAM 
Sbjct: 89  EDNEDITPDHIEELFGSNVRQLVEAVTKLSKFN-FSNKTER------QAENFRRMFLAMA 141

Query: 262 EEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSF 321
           +++RVI+VKLADRLHNMRTL  +P  KQ  IATET ++FAPLA  LGM+Q K ELE+LSF
Sbjct: 142 QDIRVIVVKLADRLHNMRTLDFLPSEKQKLIATETKEIFAPLANRLGMWQFKWELEDLSF 201

Query: 322 MYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPY 381
            Y ++++Y  ++  +A+   + E  + +   I+ K +       +     E++   K  Y
Sbjct: 202 KYLHSQEYGNIRSLIAERRSDREARINQVIDIITKGLHKSNINPI-----EVKGRPKHLY 256

Query: 382 SIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPR 441
            IY+ + + +   +++  IA LR+I+  K            Q CY  L +VH  + PIP 
Sbjct: 257 GIYEKMQRQKKEFDQIFDIAALRVIVNTK------------QECYQALAVVHDAFRPIPG 304

Query: 442 AMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVT 501
             KDYI  PKPN YQSLHTT++     +   LE+QIRT EM  IAE GIAAH+  +    
Sbjct: 305 RFKDYIGLPKPNLYQSLHTTVVSL---NGRPLEIQIRTLEMHHIAEYGIAAHWKYK---- 357

Query: 502 GLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLL 561
                         G +   N +N   + +WL  + +WQ++      + E+VD +  +L 
Sbjct: 358 ------------EAGNSQNANLSNDEQKFTWLRQLLDWQKDL---KDAEEYVDNLKENLF 402

Query: 562 GSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVE 621
              V+VFTP+G + +L +GAT VD+AY IHTE+GN M  AKVNG  +   H+L N ++VE
Sbjct: 403 DDDVYVFTPQGALISLNRGATPVDFAYRIHTEVGNHMKGAKVNGRWLPMDHILQNGDIVE 462

Query: 622 IITYN 626
           IIT N
Sbjct: 463 IITAN 467


>gi|256752957|ref|ZP_05493784.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacter ethanolicus
           CCSD1]
 gi|256748165|gb|EEU61242.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacter ethanolicus
           CCSD1]
          Length = 493

 Score =  353 bits (905), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 202/483 (41%), Positives = 292/483 (60%), Gaps = 62/483 (12%)

Query: 146 LELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTN 205
           L L+ +A   A  AHDGQ R SGEP+IIHP+EVA IL ELELD  +IAAGLLHD +EDT+
Sbjct: 19  LGLIYKAYDFAVNAHDGQIRNSGEPYIIHPIEVAYILAELELDITTIAAGLLHDVIEDTD 78

Query: 206 VVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVR 265
           V T+ ++ E FG  +  +V+G   V+KLGK++ K    S  + +A+++R+M +AM +++R
Sbjct: 79  V-TYGQLLEYFGKEIADLVDG---VTKLGKIEYK----SKVEQQAENMRKMLIAMAKDIR 130

Query: 266 VIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTN 325
           VI++KLADRLHNMRTL ++P  KQ   A ETL+++AP+A  LG+ +IK ELE+L   Y +
Sbjct: 131 VILIKLADRLHNMRTLKYLPLDKQKEKAEETLEIYAPIAHRLGISKIKWELEDLCLRYLH 190

Query: 326 AEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYK 385
            E+Y  +  +VA   KE E+ ++     + +K+++      M ++ E+    K  YSIYK
Sbjct: 191 PEEYYDLVEKVAAKRKEREEFIQNIITTIKEKLKE------MGIQAEVDGRPKHFYSIYK 244

Query: 386 AVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKD 445
            +     +  ++  +  +RII+            +  + CY VLG+VH +W PIP   KD
Sbjct: 245 KMKTQNKTFEQIYDLLAVRIIV------------NTVKDCYGVLGIVHTLWKPIPGRFKD 292

Query: 446 YIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFV 500
           YIA PKPN YQSLHTT+I     PF        E+QIRT EM   AE GIAAH+      
Sbjct: 293 YIAMPKPNMYQSLHTTVIGPKGEPF--------EIQIRTWEMHKTAEYGIAAHW------ 338

Query: 501 TGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDL 560
                      +   GKT          ++SWL  + EWQ+E      ++EF++T+  DL
Sbjct: 339 -----------KYKEGKT---TEDEFDQKLSWLRQLLEWQKEL---KDAKEFMETLKIDL 381

Query: 561 LGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVV 620
               VFVFTP+G++ NLP G+T +D+AY IHTEIG+++  AKVNG +V   + L N ++V
Sbjct: 382 FTDEVFVFTPKGDVINLPAGSTPIDFAYSIHTEIGHRLNGAKVNGKIVPINYQLKNGDIV 441

Query: 621 EII 623
           EI+
Sbjct: 442 EIL 444


>gi|410459965|ref|ZP_11313653.1| GTP pyrophosphokinase [Bacillus azotoformans LMG 9581]
 gi|409927803|gb|EKN64929.1| GTP pyrophosphokinase [Bacillus azotoformans LMG 9581]
          Length = 733

 Score =  353 bits (905), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 201/490 (41%), Positives = 288/490 (58%), Gaps = 49/490 (10%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           YL   ++  V  A   A  AH  Q R+SGEP+IIHP++VA IL ELE+D  ++AAG LHD
Sbjct: 19  YLPKEDVAFVEAAYKYAEAAHSEQYRKSGEPYIIHPIQVAGILAELEMDPVAVAAGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            VEDT V T + +E  F   V  +V+G   V+KLGK+K K    S +  +A++ R+MF+A
Sbjct: 79  VVEDTEV-TLKDLEVAFNKEVAMLVDG---VTKLGKIKYK----SKEAQQAENHRKMFIA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M +++RVI++KLADRLHNMRTL H+PP KQ  I+ ETL++FAPLA  LG+  IK ELE+ 
Sbjct: 131 MAQDIRVILIKLADRLHNMRTLKHLPPEKQRRISNETLEIFAPLAHRLGISTIKWELEDT 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           +  Y N + Y ++   + +   E E ++ E    + K+      LD + +K +I    K 
Sbjct: 191 ALRYLNPQQYYRIVNLMKNKRAERENQVHEVIDEIRKR------LDEVHLKADISGRPKH 244

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIY+ ++      NE+  +  +R+            L    + CY VLG++H  W P+
Sbjct: 245 IYSIYRKMVLQNKQFNEIYDLLAVRV------------LVESIKDCYAVLGVIHTCWKPM 292

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK N YQSLHTT+I    +    LEVQIRT EM  IAE GIAAH++ +  
Sbjct: 293 PGRFKDYIAMPKANMYQSLHTTVIGPKGDP---LEVQIRTTEMHQIAEYGIAAHWAYK-- 347

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
                           GK +  N  N+  +++W   I EWQ++      + EF++++  D
Sbjct: 348 ---------------EGKQITQNRENLQEKMTWFREILEWQQD---TNDAEEFMESLKID 389

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           L    VFVFTP+G++  LP+G+  +D+AY IHTEIGNK + +KVNG +V   HVL   ++
Sbjct: 390 LFSDMVFVFTPKGDVYELPRGSNPIDFAYRIHTEIGNKTIGSKVNGKMVPLDHVLKTGDI 449

Query: 620 VEIITYNVSF 629
           +EI+T   SF
Sbjct: 450 IEILTSKQSF 459


>gi|153810165|ref|ZP_01962833.1| hypothetical protein RUMOBE_00546 [Ruminococcus obeum ATCC 29174]
 gi|149833344|gb|EDM88425.1| RelA/SpoT family protein [Ruminococcus obeum ATCC 29174]
          Length = 776

 Score =  353 bits (905), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 208/507 (41%), Positives = 306/507 (60%), Gaps = 60/507 (11%)

Query: 126 SPERLWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
           SPE L+E+L  ++    P+ ++ ++++A  +A EAH  QKR+SGEP+IIHP+ VA IL +
Sbjct: 40  SPEVLYEELIASVKKYHPSTDISMIQKAYEVAREAHKDQKRKSGEPYIIHPLCVAIILAD 99

Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
           LELD E+I AGLLHD VEDT  +T E +E+EF A V  +V+G   V+KLG+L    +   
Sbjct: 100 LELDKETIVAGLLHDAVEDT-WMTIEEVEKEFSAEVALLVDG---VTKLGQLSYSADKVE 155

Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
           +Q   A++LR+MFLAM +++RVI++KLADRLHNMRTL +M P KQ   A ET+ ++AP+A
Sbjct: 156 LQ---AENLRKMFLAMAKDIRVILIKLADRLHNMRTLQYMRPEKQQEKARETMDIYAPIA 212

Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
             LG+ +IK EL++LS  Y   + Y  +  +VA L K   +E    N I+ K+++  Q +
Sbjct: 213 MRLGISKIKVELDDLSLKYLKPDVYYDLVDKVA-LRKSERQEF--VNNIV-KQVK--QHM 266

Query: 365 DLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
           D  ++K ++    K  +SIYK ++    +I+++  +  +RI            L    + 
Sbjct: 267 DEASIKAQVDGRIKHFFSIYKKMVNQDKTIDQIYDLFAVRI------------LVDTVKD 314

Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRT 479
           CY  LG++H ++ PIP   KDYIA PKPN YQSLHTTLI     PF        E+QIRT
Sbjct: 315 CYAALGVIHEMYKPIPGRFKDYIAMPKPNMYQSLHTTLIGPNGQPF--------EIQIRT 366

Query: 480 EEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREW 539
            EM   AE GIAAH+  +            +G+ P  K           +++WL  I EW
Sbjct: 367 FEMHKTAEYGIAAHWKYK---------ESSDGKVPVDKRE-------EEKLNWLRQILEW 410

Query: 540 QEEFVGNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNK 597
           Q++   N   REF+  +    DL    V+ FTP+G++KNLP G+T +D+AY +H+ +GN+
Sbjct: 411 QKDMSDN---REFMSLLKNDLDLFADSVYCFTPQGDVKNLPNGSTPIDFAYSVHSAVGNR 467

Query: 598 MVAAKVNGNLVSPTHVLANAEVVEIIT 624
           MV A+VNG LV   + + N + +EIIT
Sbjct: 468 MVGARVNGKLVPIEYQIKNGDRIEIIT 494


>gi|118580813|ref|YP_902063.1| (p)ppGpp synthetase I SpoT/RelA [Pelobacter propionicus DSM 2379]
 gi|118503523|gb|ABL00006.1| (p)ppGpp synthetase I, SpoT/RelA [Pelobacter propionicus DSM 2379]
          Length = 717

 Score =  353 bits (905), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 205/496 (41%), Positives = 287/496 (57%), Gaps = 52/496 (10%)

Query: 129 RLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
           RL + L    SY    +L L+R+A +   + H GQ R SGEP+IIHP+EVA +L EL LD
Sbjct: 3   RLNDILDKVASYNPTADLNLIRKAYVYCAKVHQGQTRLSGEPYIIHPMEVAGLLAELRLD 62

Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
             S+  G LHDT+EDT + T E +   FG  V  +V+G TK+SK+   K K E+      
Sbjct: 63  VASVITGFLHDTIEDT-LTTAEELTSLFGDEVATLVDGVTKISKI-HFKTKAES------ 114

Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
           +A++ R+M LAM+ ++RVI+VKLADRLHNMRTL   P  KQ SIA ET+ ++AP+A  LG
Sbjct: 115 QAENFRKMLLAMSIDIRVILVKLADRLHNMRTLEFQPELKQRSIAQETMDIYAPIANRLG 174

Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
           +  IK ELE+LSF Y N E Y  + R+++   +E E  + EA  ++  K      L    
Sbjct: 175 ISWIKVELEDLSFRYLNPEIYFDLARKISLKKREREAYVSEAKTVIADK------LGQHG 228

Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
           +K E+    K  YSIY+ +L     ++E+  +  LRI            L    + CY V
Sbjct: 229 IKGEVSGRSKHLYSIYRKMLARNVELDEIYDLIALRI------------LVDDVRDCYEV 276

Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAER 488
           LG++H  W PIP   KDYIA PK N YQSLHTT+I    +   R+EVQIRT EM  +A+ 
Sbjct: 277 LGVIHSAWKPIPGRFKDYIAMPKGNMYQSLHTTVIGPHGD---RMEVQIRTHEMHNVADA 333

Query: 489 GIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMT 548
           GIAAH+           +    G   R             R SWL  + EWQ+E      
Sbjct: 334 GIAAHWK----------YKEGKGYDERD----------VKRFSWLRQLLEWQQEL---QD 370

Query: 549 SREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLV 608
           SREF+D++  +L    V+VFTP+G++K  P+G+T +D+AY +H+++G++ V AKVNG LV
Sbjct: 371 SREFMDSVKVELFPEEVYVFTPQGDVKPFPRGSTPIDFAYAVHSDVGHRCVGAKVNGKLV 430

Query: 609 SPTHVLANAEVVEIIT 624
              + L N ++VE+IT
Sbjct: 431 PLKYELKNGDIVEVIT 446


>gi|228923159|ref|ZP_04086450.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar huazhongensis
           BGSC 4BD1]
 gi|423582615|ref|ZP_17558726.1| GTP pyrophosphokinase [Bacillus cereus VD014]
 gi|423634768|ref|ZP_17610421.1| GTP pyrophosphokinase [Bacillus cereus VD156]
 gi|228836538|gb|EEM81888.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar huazhongensis
           BGSC 4BD1]
 gi|401213494|gb|EJR20235.1| GTP pyrophosphokinase [Bacillus cereus VD014]
 gi|401278754|gb|EJR84684.1| GTP pyrophosphokinase [Bacillus cereus VD156]
          Length = 727

 Score =  353 bits (905), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 204/496 (41%), Positives = 293/496 (59%), Gaps = 50/496 (10%)

Query: 134 LRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIA 193
           L     YL+  ++ELV RA   A +AH  Q R+SGEP+IIHP++VA IL +L +D  +++
Sbjct: 13  LEKASQYLADEDIELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDPATVS 72

Query: 194 AGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDL 253
           AG LHD VEDT + T E IE EF   +  +V+G   V+KLGK+K K+  H  Q  +A++ 
Sbjct: 73  AGFLHDVVEDTEI-TLEDIEREFNKEIAMLVDG---VTKLGKIKYKS--HEQQ--QAENH 124

Query: 254 RQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIK 313
           R+MF+AM +++RVI++KLADRLHNMRTL H+P  KQ  IA ETL++FAPLA  LG+  IK
Sbjct: 125 RKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGISTIK 184

Query: 314 SELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEI 373
            ELE+ S  Y N + Y     R+ +L K    E EE  + +M  I +   LD + ++ EI
Sbjct: 185 WELEDTSLRYLNPQQYY----RIVNLMKRKRAEREEYLEEVMTGIREK--LDEVAIQPEI 238

Query: 374 RSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVH 433
               K  YSIY+ +       NE+  +  +R+++            +  + CY VLG++H
Sbjct: 239 SGRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVV------------NSIKDCYAVLGIIH 286

Query: 434 GIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAH 493
             W P+P   KDYIA PK N YQSLHTT+I    +    LEVQIRT+EM  IAE GIAAH
Sbjct: 287 TCWKPMPGRFKDYIAMPKANLYQSLHTTVIGPKGDP---LEVQIRTKEMHEIAEFGIAAH 343

Query: 494 YSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFV 553
           ++ +                  GKT       +  +++W   I EWQ E      + EF+
Sbjct: 344 WAYK-----------------EGKT-AETTGTLEKKLTWFRQILEWQNE---ASNAEEFM 382

Query: 554 DTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHV 613
           +++  DL    VFVFTP+G++  LP G+  +D+AY +H+EIGNK + AKVNG +V+  + 
Sbjct: 383 ESLKIDLFSDMVFVFTPKGDVMELPLGSVPIDFAYRVHSEIGNKTIGAKVNGKMVTLDYK 442

Query: 614 LANAEVVEIITYNVSF 629
           L   +++EI+T   S+
Sbjct: 443 LKTGDIIEILTSKHSY 458


>gi|374297070|ref|YP_005047261.1| RelA/SpoT family (p)ppGpp synthetase [Clostridium clariflavum DSM
           19732]
 gi|359826564|gb|AEV69337.1| (p)ppGpp synthetase, RelA/SpoT family [Clostridium clariflavum DSM
           19732]
          Length = 725

 Score =  352 bits (904), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 200/491 (40%), Positives = 299/491 (60%), Gaps = 63/491 (12%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
            Y S  + EL+ +A  ++ EAH+GQ+R SGEPFI+HP+EVA IL ELELD  +I AG+LH
Sbjct: 14  KYNSNCDFELLEKAYQVSKEAHNGQQRVSGEPFIMHPMEVANILAELELDCTAIVAGILH 73

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           DT+EDT   T+E+++E+FG  V  +V+G   V+KLGK+    +    ++ +A++LR+MFL
Sbjct: 74  DTIEDT-TYTYEQLKEKFGEEVALLVDG---VTKLGKIPYTTK----EEQQAENLRKMFL 125

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM++++RVI++KLADRLHNMRTL +M P KQ   A ETL+++AP+A  LG+ +IK ELE+
Sbjct: 126 AMSKDIRVILIKLADRLHNMRTLKYMSPEKQIEKAKETLEIYAPIAHRLGISKIKWELED 185

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
           LS  Y + + Y  +  ++A+  +E E  +E+    L +KI +      + ++  +    K
Sbjct: 186 LSLRYLDPKGYYDLVDKIANKRREREAYIEKILATLKEKISE------LGIQVRLDGRPK 239

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIY+ + +   +++++  +   R+I+               + CY VLGLVH I+ P
Sbjct: 240 HFYSIYRKMQQQNKTLDQIYDLFAFRVIV------------DTVKDCYAVLGLVHEIFKP 287

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMDLIAERGIAAH 493
           +P   KDYIA PKPN YQSLHTT+I     PF        E+QIRT EM  +AE GIAAH
Sbjct: 288 MPGRFKDYIAMPKPNMYQSLHTTVIGPDGVPF--------EIQIRTWEMHRVAEVGIAAH 339

Query: 494 YSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFV 553
           +    +  G  G    N                  +++WL  + +WQ +        EF+
Sbjct: 340 WK---YKEGKSGGGYEN------------------KLAWLRQLLDWQTD---TRDPNEFM 375

Query: 554 DTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHV 613
           +T+  DL    VFVFTP+G++ +L  G+T +D+AY+IH+ IGNKMV AKVNG +V   + 
Sbjct: 376 ETLKIDLFTDEVFVFTPKGDVVSLAAGSTPIDFAYLIHSAIGNKMVGAKVNGKIVPIEYE 435

Query: 614 LANAEVVEIIT 624
           L N ++VEI+T
Sbjct: 436 LKNGDIVEILT 446


>gi|410667595|ref|YP_006919966.1| GTP pyrophosphokinase RelA [Thermacetogenium phaeum DSM 12270]
 gi|409105342|gb|AFV11467.1| GTP pyrophosphokinase RelA [Thermacetogenium phaeum DSM 12270]
          Length = 726

 Score =  352 bits (903), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 211/488 (43%), Positives = 290/488 (59%), Gaps = 52/488 (10%)

Query: 138 ISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           I    PN + ELV RA + A EAH GQ R SGE FI HP++VA IL +L+LD  SI AGL
Sbjct: 10  IEQYYPNFDRELVERAYLFAKEAHRGQFRNSGEAFIEHPLQVACILADLQLDITSIVAGL 69

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDTN  + + IE +FG  VR +V G   V+KLGK++ K    S +D  A++LR+M
Sbjct: 70  LHDVVEDTNT-SLQDIETDFGPEVRFLVAG---VTKLGKIEYK----SKEDRHAENLRKM 121

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
           FLAM  ++RVI++KLADRLHN+RTL      KQ  IA ETL++FAP+A  LG+Y+IK E+
Sbjct: 122 FLAMARDIRVILIKLADRLHNLRTLGAHEVPKQREIARETLEIFAPVAHRLGIYKIKWEM 181

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+L+F Y   + Y ++  R+A   KE E  +   N ++ K  E    L    +K EI   
Sbjct: 182 EDLAFRYLEPDKYYELADRIAKKRKEREDYI---NLVITKLREK---LTEAGIKAEISGR 235

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSIY+ ++     ++E+  +  +R+I++              + CY  LG+VH +W
Sbjct: 236 PKNFYSIYRKMVDQGKDLSEIYDLVAVRVIVE------------TVKECYATLGIVHTMW 283

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            PIP   KDYIA PK N YQSLHTTL+  L E     E+QIRT EM   AE GIAAH+  
Sbjct: 284 KPIPGRFKDYIAMPKQNMYQSLHTTLVGPLGEP---FELQIRTFEMHRTAEYGIAAHW-- 338

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
                      +  GR        LN+     ++SWL  I EWQ E      +REF++++
Sbjct: 339 ---------RYKEGGR--------LNDPEFEKKLSWLRQILEWQHEL---RDAREFMESL 378

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             DL    VFVFTP+G++  LP G+  +D+AY IHTE+G++ + AKVNG +V   + L N
Sbjct: 379 KIDLFSDVVFVFTPKGDVVELPSGSVPIDFAYRIHTEVGHRCIGAKVNGRIVPLDYRLKN 438

Query: 617 AEVVEIIT 624
            ++VEI+T
Sbjct: 439 GDIVEILT 446


>gi|158320743|ref|YP_001513250.1| (p)ppGpp synthetase I SpoT/RelA [Alkaliphilus oremlandii OhILAs]
 gi|158140942|gb|ABW19254.1| (p)ppGpp synthetase I, SpoT/RelA [Alkaliphilus oremlandii OhILAs]
          Length = 724

 Score =  352 bits (903), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 201/501 (40%), Positives = 297/501 (59%), Gaps = 61/501 (12%)

Query: 130 LWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
           + EDL   I   +P  + EL+ +A   A +AH GQ R+SGE + IHPVEVARIL +L++D
Sbjct: 2   MLEDLINKIKEYNPQCDFELITKAFNYAEKAHQGQYRKSGEDYFIHPVEVARILIDLQMD 61

Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
             +I AGLLHD +EDT    ++ ++EEFG  +  +VEG TK+++L         +S ++ 
Sbjct: 62  ASTIVAGLLHDVIEDTEY-GYDMVKEEFGVEIADLVEGVTKITRLS-------FNSKEER 113

Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
           +A++LR+M LAM +++RVI++KLADRLHNMRTL    P KQ   ATETL++FAP+A  LG
Sbjct: 114 QAENLRKMVLAMAKDIRVILIKLADRLHNMRTLKFQNPEKQKEKATETLEIFAPIANRLG 173

Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
           + +IK ELE++   Y + + Y  +  +V+   K+ E  + +  + L +K+ED        
Sbjct: 174 ISRIKWELEDICLRYIDPQGYYDLVEKVSQKRKDRENFISDIIETLREKLED------FD 227

Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
           ++ EI    K  YSIY+ +     S +E+     +R+I+            +  + CY V
Sbjct: 228 IENEITGRPKHFYSIYRKMTYQGKSFDEIFDFMAVRVIV------------NSVKDCYGV 275

Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMD 483
           LG+VH IW PIP   KDYIA PKPN YQSLHTT+I     PF        E+QIRT EM 
Sbjct: 276 LGVVHTIWKPIPGRFKDYIAMPKPNMYQSLHTTVIGPQGDPF--------EIQIRTFEMH 327

Query: 484 LIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEF 543
            IAE GIAAH+                 +   G+T  +   N  ++++WL  + EW++E 
Sbjct: 328 QIAEYGIAAHW-----------------KYKEGRTETVEQQN-DMKLAWLRQMLEWEKEI 369

Query: 544 VGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKV 603
                 +EF++++  DL  + VFVFTP+GE+ NLP G+T +D+AY IH+ +GNK V AKV
Sbjct: 370 ---KDPKEFMESLKIDLFSNEVFVFTPKGEVVNLPIGSTPIDFAYKIHSGVGNKCVGAKV 426

Query: 604 NGNLVSPTHVLANAEVVEIIT 624
           +G +V   + L N  +V+I+T
Sbjct: 427 DGRIVPIDYKLKNGNIVQILT 447


>gi|300914191|ref|ZP_07131507.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacter sp. X561]
 gi|307724574|ref|YP_003904325.1| (p)ppGpp synthetase I SpoT/RelA [Thermoanaerobacter sp. X513]
 gi|300889126|gb|EFK84272.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacter sp. X561]
 gi|307581635|gb|ADN55034.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacter sp. X513]
          Length = 719

 Score =  352 bits (903), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 201/484 (41%), Positives = 293/484 (60%), Gaps = 62/484 (12%)

Query: 146 LELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTN 205
           L L+ +A   A  AHDGQ R SGEP+IIHP+EVA IL ELELD  +IAAGLLHD +EDT+
Sbjct: 19  LGLIYKAYDFAVNAHDGQIRNSGEPYIIHPIEVAYILAELELDITTIAAGLLHDVIEDTD 78

Query: 206 VVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVR 265
           V T+ ++ E FG  +  +V+G   V+KLGK++ K    S  + +A+++R+M +AM +++R
Sbjct: 79  V-TYGQLLEYFGKEIADLVDG---VTKLGKIEYK----SKVEQQAENMRKMLIAMAKDIR 130

Query: 266 VIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTN 325
           VI++KLADRLHNMRTL ++P  KQ   A ETL+++AP+A  LG+ +IK ELE+L   Y +
Sbjct: 131 VILIKLADRLHNMRTLKYLPLDKQKEKAEETLEIYAPIAHRLGISKIKWELEDLCLRYLH 190

Query: 326 AEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYK 385
            ++Y  +  +VA   KE E+ ++     + +K+++      M ++ E+    K  YSIYK
Sbjct: 191 PDEYYDLVEKVAAKRKEREEFIQNIITTIKEKLKE------MGIQAEVDGRPKHFYSIYK 244

Query: 386 AVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKD 445
            +     +  ++  +  +RII+            +  + CY VLG+VH +W PIP   KD
Sbjct: 245 KMKTQNKTFEQIYDLLAVRIIV------------NTVKDCYGVLGIVHTLWKPIPGRFKD 292

Query: 446 YIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFV 500
           YIA PKPN YQSLHTT+I     PF        E+QIRT EM   AE GIAAH+      
Sbjct: 293 YIAMPKPNMYQSLHTTVIGPKGEPF--------EIQIRTWEMHKTAEYGIAAHW------ 338

Query: 501 TGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDL 560
                      +   GKT   +      ++SWL  + EWQ+E      ++EF++T+  DL
Sbjct: 339 -----------KYKEGKT---SEDEFDQKLSWLRQLLEWQKEL---KDAKEFMETLKIDL 381

Query: 561 LGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVV 620
               VFVFTP+G++ NLP G+T +D+AY IHTEIG+++  AKVNG +V   + L N ++V
Sbjct: 382 FTDEVFVFTPKGDVINLPAGSTPIDFAYSIHTEIGHRLNGAKVNGKIVPINYQLKNGDIV 441

Query: 621 EIIT 624
           EI+ 
Sbjct: 442 EILV 445


>gi|237667442|ref|ZP_04527426.1| RelA/SpoT family protein [Clostridium butyricum E4 str. BoNT E
           BL5262]
 gi|237655790|gb|EEP53346.1| RelA/SpoT family protein [Clostridium butyricum E4 str. BoNT E
           BL5262]
          Length = 737

 Score =  352 bits (902), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 202/480 (42%), Positives = 285/480 (59%), Gaps = 42/480 (8%)

Query: 145 ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDT 204
           ++ELV++A   A EAH  QKR SGEP+IIHP+ VA IL EL +D  +I AGLLHD +EDT
Sbjct: 17  DIELVKKAYNFAKEAHKDQKRESGEPYIIHPIAVAEILAELGMDTNTIVAGLLHDVIEDT 76

Query: 205 NVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEV 264
           +  +FE     F   V  +V+G TK++KLG+++ K +    ++ +AD++R+M LAM +++
Sbjct: 77  DC-SFEDASRMFNPEVANLVDGVTKLTKLGEMEYKTK----EEQQADNVRKMLLAMAKDI 131

Query: 265 RVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYT 324
           RVII+KLADRLHNMRTL  MP +KQ + A ETL ++APLA  LGM +IK ELE+L F Y 
Sbjct: 132 RVIIIKLADRLHNMRTLKFMPANKQKNKAKETLDIYAPLAHRLGMSKIKWELEDLCFRYL 191

Query: 325 NAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIY 384
           + ++Y  + + +A+   E E  +++    L KK+E         + ++I    K  YSIY
Sbjct: 192 HEKEYYDLVKDIAEKRVERESYIQDIVNDLYKKLEG------AGIDSDIDGRPKHFYSIY 245

Query: 385 KAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMK 444
           K ++    SI E+  +  +R+            L +  + CY VLG+VH I+ PIP   K
Sbjct: 246 KKMVNKNKSIEEIFDLTAIRV------------LVNSVKDCYGVLGIVHTIYRPIPGRFK 293

Query: 445 DYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLV 504
           DYIA PKPN YQSLHTT+I    ++    E+QIRT EM   AE GIAAH+  +   T   
Sbjct: 294 DYIAMPKPNMYQSLHTTVIGPQGKT---FEIQIRTFEMHKTAEYGIAAHWKYKEGDTA-- 348

Query: 505 GHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSR 564
                      G T          +++WL  + EWQ+E      + EF++    DL    
Sbjct: 349 -----------GGTEVDKQKEFEKKLAWLRDMLEWQKE---TSDAEEFMEGFKIDLFSDE 394

Query: 565 VFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
           VFVFTP+G + NL   AT +D+AY IHT++GNK V AKVNG +V   + L   E+VEI+T
Sbjct: 395 VFVFTPKGVVINLCSKATPIDFAYRIHTDVGNKCVGAKVNGKIVPLDYTLKTGEIVEILT 454


>gi|256619448|ref|ZP_05476294.1| RelA/SpoT protein [Enterococcus faecalis ATCC 4200]
 gi|256598975|gb|EEU18151.1| RelA/SpoT protein [Enterococcus faecalis ATCC 4200]
          Length = 737

 Score =  352 bits (902), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 197/492 (40%), Positives = 288/492 (58%), Gaps = 49/492 (9%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           +Y+ P  +ELV++AL  A +AH+GQ R+SGEP+IIHP++VA IL EL +D  ++A G LH
Sbjct: 18  TYMGPEHVELVQKALTYAEKAHEGQVRQSGEPYIIHPIQVAGILAELHMDPHTVATGFLH 77

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT+V T + ++EEFG  +  +V+G   V+KLGK+K K+    +    A++ R+M L
Sbjct: 78  DVVEDTDV-TLDDLKEEFGEDIAMLVDG---VTKLGKIKYKSHEEQL----AENYRKMLL 129

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM +++RVI+VKLADRLHNMRTL H+   KQ  IA ETL+++APLA  LG+ +IK ELE+
Sbjct: 130 AMAQDLRVIMVKLADRLHNMRTLKHLREDKQRRIAQETLEIYAPLAHRLGISRIKWELED 189

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
            +  Y N   Y ++   +     E E  + EA + +    ED      + +  EI    K
Sbjct: 190 TALRYINPNQYYRIVNLMQSKRDEREAYVAEAVEDIRLATED------LEIYAEIYGRPK 243

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIY+ +   +   NE+  +  +R+I+               + CY VLG +H  WTP
Sbjct: 244 HIYSIYRKMKDQKKQFNEIYDLLAIRVIV------------DSIKDCYAVLGAIHTRWTP 291

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PK N YQS+HTT+I         +EVQIRT EM  IAE G+AAH++ + 
Sbjct: 292 MPGRFKDYIAMPKANMYQSIHTTVIG---PKGNPVEVQIRTHEMHQIAEFGVAAHWAYK- 347

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                            GK   +    +  ++ W + I E Q+E   +  + EF+  +  
Sbjct: 348 ----------------EGKAEKIETDELTKQVDWFHEIIELQDE---SYDASEFMQGVKE 388

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           D+   +V+VFTP G++  LPKG+  +D+AY IHTEIGNK   AKVNG +V   +VL N +
Sbjct: 389 DIFSDKVYVFTPSGDVTELPKGSGPLDFAYSIHTEIGNKTTGAKVNGKMVQLDYVLKNGD 448

Query: 619 VVEIITYNVSFS 630
           ++E++T   SF 
Sbjct: 449 IIEVLTSPNSFG 460


>gi|86158972|ref|YP_465757.1| (p)ppGpp synthetase I SpoT/RelA [Anaeromyxobacter dehalogenans
           2CP-C]
 gi|85775483|gb|ABC82320.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA
           [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 746

 Score =  351 bits (901), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 199/509 (39%), Positives = 294/509 (57%), Gaps = 48/509 (9%)

Query: 119 SDAFKEDSPERLWE--DLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHP 175
           SDA +   P  L    D+   +S   P+ +L+L+++A + + + H GQ R+SGEP+++HP
Sbjct: 11  SDATRYAGPSTLLRLNDILDRVSGYHPDPDLDLIKKAYVYSAKVHQGQIRKSGEPYLVHP 70

Query: 176 VEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGK 235
           +EVA IL EL+LD  S+  GLLHDT+EDT + T + I E FG  +  +V+G TK+S+   
Sbjct: 71  LEVAGILAELKLDESSVVTGLLHDTIEDT-LATKKEISELFGLEIADLVDGVTKLSQFTA 129

Query: 236 LKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATE 295
              + E       +A++ R+M +AM +++RV++VKLADR HNMRTL  M P  Q  IA E
Sbjct: 130 ANTQEEK------QAENFRKMVVAMAKDIRVLLVKLADRTHNMRTLDAMKPESQERIARE 183

Query: 296 TLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILM 355
           TL ++APLA  LG+  IK+ELE LSF Y    DY+++  +V+   +E E+ + E  +I+ 
Sbjct: 184 TLDIYAPLANRLGIQWIKTELEELSFKYLRPADYSELNEKVSVRAREKERFVAEVVEIIR 243

Query: 356 KKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGV 415
           +++ +        +K ++    K  YSIY+ + +      ++  +   R+I+        
Sbjct: 244 RRLAE------AGMKADVSGRVKHVYSIYRKMRQLDVDFEQIQDVIGFRVIVDTVAE--- 294

Query: 416 GPLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEV 475
                    CY  LG VH +W P+P   KDYIA PKPN YQSLHTT++    E   R+EV
Sbjct: 295 ---------CYESLGFVHSLWKPVPGRFKDYIAIPKPNLYQSLHTTVVGPAGE---RIEV 342

Query: 476 QIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNA 535
           QIRT EM  IAE G+AAH++            +  GR  +G  +   +A       WL  
Sbjct: 343 QIRTREMHRIAEEGVAAHWA-----------YKEKGRDGKGAELSRKDAA---SFGWLRQ 388

Query: 536 IREWQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIG 595
           + E+Q +       REF++T+  DL    VFVFTP+G +K+LP+GAT VD+AY IH+EIG
Sbjct: 389 LVEFQRDLA---DPREFLETVKVDLFSDEVFVFTPKGAVKSLPRGATPVDFAYTIHSEIG 445

Query: 596 NKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
              V AKVNG LV   + L N + +EI+T
Sbjct: 446 EHCVGAKVNGKLVPLRYTLKNGDTIEILT 474


>gi|281418020|ref|ZP_06249040.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium thermocellum JW20]
 gi|281409422|gb|EFB39680.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium thermocellum JW20]
          Length = 724

 Score =  351 bits (901), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 204/493 (41%), Positives = 296/493 (60%), Gaps = 64/493 (12%)

Query: 138 ISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           I   +PN +  L+ +A  L+ EAH GQ+R SG+PFI+HP+EVA IL +LELD  +I AG+
Sbjct: 12  IKKYNPNCDFALIEKAHNLSLEAHKGQQRESGDPFIVHPMEVANILADLELDCTAIVAGI 71

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT+  T E+I E FG  V  +V+G   V+KLGK+    +    ++++A++LR+M
Sbjct: 72  LHDIVEDTSY-TIEQIRENFGDEVANLVDG---VTKLGKIPYTTK----EELQAENLRKM 123

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
           FLAM +++RVI++KLADRLHNMRTL +MP  KQ   A ETL+++APLA  LG+ +IK EL
Sbjct: 124 FLAMAKDIRVILIKLADRLHNMRTLKYMPTEKQIEKAKETLEIYAPLAHRLGISKIKWEL 183

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+L   Y + + Y  +  ++A   +E E  + E  K + +K  +      + +   I   
Sbjct: 184 EDLCLRYLDPKGYYDLVNKIAKKRREREAYISEIIKTIQEKTVE------IGIDAHIEGR 237

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSIY+ +++   +I ++  +  +R+I+            +  + CY VLGLVH I+
Sbjct: 238 PKHFYSIYRKMVQQNKTIEQIYDLFAVRVIV------------TTVKDCYAVLGLVHEIF 285

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMDLIAERGIA 491
            P+P   KDYIA PKPN YQSLHTTLI     PF        EVQIRT EM  +AE GIA
Sbjct: 286 KPMPGRFKDYIAMPKPNMYQSLHTTLIGHEGVPF--------EVQIRTWEMHRVAEVGIA 337

Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
           AH+                 +   GK+      +   +++WL  + EWQ+E      + E
Sbjct: 338 AHW-----------------KYKEGKSA----DDYDNKLAWLRQLLEWQKEM---RDASE 373

Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
           F++T+  DL    VFVFTP+G++ +LP G+T +D+AY IH+ IGNKM  AKVN  +V   
Sbjct: 374 FMETLKIDLFTDEVFVFTPKGDVISLPAGSTPIDFAYAIHSAIGNKMSGAKVNNKIVPID 433

Query: 612 HVLANAEVVEIIT 624
           +VL N ++VEI+T
Sbjct: 434 YVLQNGDIVEILT 446


>gi|229086970|ref|ZP_04219127.1| GTP pyrophosphokinase [Bacillus cereus Rock3-44]
 gi|228696346|gb|EEL49174.1| GTP pyrophosphokinase [Bacillus cereus Rock3-44]
          Length = 728

 Score =  351 bits (901), Expect = 6e-94,   Method: Compositional matrix adjust.
 Identities = 203/496 (40%), Positives = 291/496 (58%), Gaps = 50/496 (10%)

Query: 134 LRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIA 193
           L     YL+ +++ELV RA   A +AH  Q R+SGEP+IIHP++VA IL +L +D  +++
Sbjct: 13  LEKASQYLADDDIELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDPSTVS 72

Query: 194 AGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDL 253
           AG LHD VEDT V T E IE EF   +  +V+G   V+KLGK+K K+  H  Q  +A++ 
Sbjct: 73  AGFLHDVVEDTEV-TLEDIEREFNKEIAMLVDG---VTKLGKIKYKS--HEQQ--QAENH 124

Query: 254 RQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIK 313
           R+MF+AM +++RVI++KL+DRLHNMRTL H+P  KQ  IA ETL++FAPLA  LG+  IK
Sbjct: 125 RKMFIAMAQDIRVILIKLSDRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGINTIK 184

Query: 314 SELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEI 373
            ELE+ S  Y N + Y     R+ +L K    E EE    +M  I D   L  + ++ EI
Sbjct: 185 WELEDTSLRYLNPQQYY----RIVNLMKRKRAEREEYLDEVMTGIRDK--LKEVAIQPEI 238

Query: 374 RSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVH 433
               K  YSIY+ +       NE+  +  +R+++            +  + CY VLG++H
Sbjct: 239 SGRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVV------------NSIKDCYAVLGIIH 286

Query: 434 GIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAH 493
             W P+P   KDYIA PK N YQSLHTT+I    +    LEVQIRT+EM  IAE GIAAH
Sbjct: 287 TCWKPMPGRFKDYIAMPKANLYQSLHTTVIGPKGDP---LEVQIRTKEMHEIAEYGIAAH 343

Query: 494 YSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFV 553
           +            A   G++            +  +++W   I EWQ E      + EF+
Sbjct: 344 W------------AYKEGKAAEA------TGTLEKKLTWFRQILEWQNE---TSNAEEFM 382

Query: 554 DTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHV 613
           +++  DL    VFVFTP+G++  LP G+  +D+AY +H+EIGNK + AKVNG +V+  + 
Sbjct: 383 ESLKIDLFSDMVFVFTPKGDVMELPLGSVPIDFAYRVHSEIGNKTIGAKVNGKMVTLDYK 442

Query: 614 LANAEVVEIITYNVSF 629
           L   +++EI+T   S+
Sbjct: 443 LKTGDIIEILTSKHSY 458


>gi|23099479|ref|NP_692945.1| GTP pyrophosphokinase [Oceanobacillus iheyensis HTE831]
 gi|22777708|dbj|BAC13980.1| GTP pyrophosphokinase (stringent response) [Oceanobacillus
           iheyensis HTE831]
          Length = 734

 Score =  351 bits (901), Expect = 6e-94,   Method: Compositional matrix adjust.
 Identities = 200/493 (40%), Positives = 300/493 (60%), Gaps = 54/493 (10%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           +YLS +++ L+ +A   A +AH  Q R+SGEP+IIHPV+VA IL +L++D E+I+AG LH
Sbjct: 18  TYLSEDDVALIEQAYEFASDAHKDQFRKSGEPYIIHPVQVAGILADLQMDSETISAGFLH 77

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT+V T E++EE F   +  +V+G   V+KLGK++ + +       +A++ R+MF+
Sbjct: 78  DVVEDTDV-TVEQLEEAFNHEIAMLVDG---VTKLGKIRYETKEAQ----QAENHRKMFV 129

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM +++RVI++KLADRLHNMRTL H+ P KQ  I+ ETL++FAPLA  LG+  IK ELE+
Sbjct: 130 AMAKDIRVIMIKLADRLHNMRTLKHLAPEKQRRISNETLEIFAPLAHRLGISTIKWELED 189

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTV--KTEIRSV 376
            +  Y N + Y     R+  L K+  +E E      ++++ D+  L+L TV  + E+   
Sbjct: 190 TALRYLNPQQYY----RIVQLMKQKREERES----YIQEVIDELALELDTVNIEAEMSGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSIY+ ++K +   NE+  +  +RI+++                CY VLG++H  W
Sbjct: 242 PKHLYSIYQKMVKQKKQFNEIYDLLAVRILVENIKD------------CYAVLGIIHTNW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA PK N YQSLHTT+I    +    LEVQIRT+EM  IAE GIAAH+  
Sbjct: 290 KPMPGRFKDYIAMPKQNLYQSLHTTVIGPKGDP---LEVQIRTKEMHDIAEYGIAAHW-- 344

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
                     A   G++ R K+      +   ++SW   I EWQ E      + EF++++
Sbjct: 345 ----------AYKEGKTSREKS------SFEEKLSWFREILEWQSE---THDAEEFIESL 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             DL    V+VFTP+GE+  LP G+  +D+A+ IHTEIGNK + +K+NG +    + L N
Sbjct: 386 KIDLFSDMVYVFTPKGEVIELPSGSIPLDFAFKIHTEIGNKTIGSKINGKMEPLDYELQN 445

Query: 617 AEVVEIITYNVSF 629
            ++VE++T   S+
Sbjct: 446 GDIVEVMTSKHSY 458


>gi|52141100|ref|YP_085730.1| GTP diphosphokinase [Bacillus cereus E33L]
 gi|51974569|gb|AAU16119.1| GTP diphosphokinase (GTP pyrophosphokinase) [Bacillus cereus E33L]
          Length = 727

 Score =  351 bits (901), Expect = 6e-94,   Method: Compositional matrix adjust.
 Identities = 204/496 (41%), Positives = 291/496 (58%), Gaps = 50/496 (10%)

Query: 134 LRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIA 193
           L     YL   ++ELV RA   A +AH  Q R+SGEP+IIHP++VA IL +L +D  +++
Sbjct: 13  LEKASQYLVDEDIELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDPATVS 72

Query: 194 AGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDL 253
           AG LHD VEDT + T E IE EF   +  +V+G   V+KLGK+K K+  H  Q  +A++ 
Sbjct: 73  AGFLHDVVEDTEI-TLEDIEREFNKEIAMLVDG---VTKLGKIKYKS--HEQQ--QAENH 124

Query: 254 RQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIK 313
           R+MF+AM +++RVI++KLADRLHNMRTL H+P  KQ  IA ETL++FAPLA  LG+  IK
Sbjct: 125 RKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGISTIK 184

Query: 314 SELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEI 373
            ELE+ S  Y N + Y     R+ +L K    E EE    +M  I +   LD + ++ EI
Sbjct: 185 WELEDTSLRYLNPQQYY----RIVNLMKRKRAEREEYLDEVMTGIREK--LDEVAIQPEI 238

Query: 374 RSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVH 433
               K  YSIY+ +       NE+  +  +R+++            +  + CY VLG++H
Sbjct: 239 SGRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVV------------NSIKDCYAVLGIIH 286

Query: 434 GIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAH 493
             W P+P   KDYIA PK N YQSLHTT+I    +    LEVQIRT+EM  IAE GIAAH
Sbjct: 287 TCWKPMPGRFKDYIAMPKANLYQSLHTTVIGPKGDP---LEVQIRTKEMHEIAEFGIAAH 343

Query: 494 YSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFV 553
           ++ +                  GKT       +  +++W   I EWQ E      + EF+
Sbjct: 344 WAYK-----------------EGKT-AETTGTLEKKLTWFRQILEWQNE---ASNAEEFM 382

Query: 554 DTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHV 613
           +++  DL    VFVFTP+G++  LP G+  +D+AY +H+EIGNK + AKVNG +V+  + 
Sbjct: 383 ESLKIDLFSDMVFVFTPKGDVMELPLGSVPIDFAYRVHSEIGNKTIGAKVNGKMVTLDYK 442

Query: 614 LANAEVVEIITYNVSF 629
           L   +++EI+T   S+
Sbjct: 443 LKTGDIIEILTSKHSY 458


>gi|152976825|ref|YP_001376342.1| (p)ppGpp synthetase I SpoT/RelA [Bacillus cytotoxicus NVH 391-98]
 gi|152025577|gb|ABS23347.1| (p)ppGpp synthetase I, SpoT/RelA [Bacillus cytotoxicus NVH 391-98]
          Length = 727

 Score =  351 bits (901), Expect = 6e-94,   Method: Compositional matrix adjust.
 Identities = 202/494 (40%), Positives = 293/494 (59%), Gaps = 57/494 (11%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
            YL+ +++ELV RA   A +AH  Q R+SGEP+IIHP++VA IL +L +D  +++AG LH
Sbjct: 18  QYLADDDIELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDPSTVSAGFLH 77

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT V T E IE EF   +  +V+G   V+KLGK+K K+  H  Q  +A++ R+MF+
Sbjct: 78  DVVEDTEV-TLEDIEREFSKEIAMLVDG---VTKLGKIKYKS--HEQQ--QAENHRKMFI 129

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM +++RVI++KLADRLHNMRTL H+P  KQ  IA ETL++FAPLA  LG+  IK ELE+
Sbjct: 130 AMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGINTIKWELED 189

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
            S  Y N + Y     R+ +L K    E EE    +M  I++   L+ +++  +I    K
Sbjct: 190 TSLRYLNPQQYY----RIVNLMKRKRAEREEYLDEVMTSIQEK--LNEVSIHPDISGRPK 243

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIY+ +       NE+  +  +R+++            +  + CY VLG++H  W P
Sbjct: 244 HIYSIYRKMALQNKQFNEIYDLLAVRVVV------------NSIKDCYAVLGIIHTCWKP 291

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYS--- 495
           +P   KDYIA PK N YQSLHTT+I    +    LEVQIRT+EM  IAE GIAAH++   
Sbjct: 292 MPGRFKDYIAMPKANLYQSLHTTVIGPKGDP---LEVQIRTKEMHEIAEYGIAAHWAYKE 348

Query: 496 GRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDT 555
           G+   TG                       +  +++W   I EWQ E      + EF+++
Sbjct: 349 GKAAATG----------------------TLEKKLTWFRQILEWQNE---ASNAEEFMES 383

Query: 556 ITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLA 615
           +  DL    VFVFTP+G++  LP G+  +D+AY +H+EIGNK + AKVNG +V+  + L 
Sbjct: 384 LKIDLFSDMVFVFTPKGDVMELPMGSVPIDFAYRVHSEIGNKTIGAKVNGKMVTLDYKLK 443

Query: 616 NAEVVEIITYNVSF 629
             +++EI+T   S+
Sbjct: 444 TGDIIEILTSKHSY 457


>gi|374307479|ref|YP_005053910.1| GTP diphosphokinase [Filifactor alocis ATCC 35896]
 gi|291166507|gb|EFE28553.1| GTP diphosphokinase [Filifactor alocis ATCC 35896]
          Length = 733

 Score =  351 bits (901), Expect = 6e-94,   Method: Compositional matrix adjust.
 Identities = 192/485 (39%), Positives = 298/485 (61%), Gaps = 48/485 (9%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y S  ++ +V +A + A+E H  Q R+SGE +IIHPVEVA+IL ELE+D ++IAAGLLHD
Sbjct: 12  YNSGADVSIVEKAYLHAYEGHKNQYRKSGEKYIIHPVEVAKILAELEMDMDTIAAGLLHD 71

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            +EDT++ T+E +  EFG T+  +V+G   V+KLG++K      S Q+++A++ R+MF A
Sbjct: 72  VLEDTDM-TYEEMASEFGTTIADLVDG---VTKLGQIKY----QSKQEMQAENFRKMFFA 123

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M +++RV+++KLADRLHNMRT+ +MP  K    + ET +++AP+A  LG+++IK E+E+L
Sbjct: 124 MGKDIRVVLIKLADRLHNMRTMKYMPKEKAIEKSKETAEIYAPIANRLGIFRIKWEMEDL 183

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           +  Y + + Y ++  +V+   +E EK +E   + +  K+E++       +  +I+   K 
Sbjct: 184 ALRYLDPDGYRELTEKVSLKRQEREKYIESVIEQIEVKLEEND------ITCDIKGRAKH 237

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIYK +     +  E+  +  +RII+               + CY  +GLVH IW PI
Sbjct: 238 FYSIYKKMKYQDKTFEEIYDLMAVRIIV------------DNIKDCYGAVGLVHTIWKPI 285

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PKPN YQSLHTT++    E    LE+QIRT +M+ IAE GIAAH+  +  
Sbjct: 286 PTRFKDYIAMPKPNMYQSLHTTVVGPDGEP---LEIQIRTWDMNRIAEFGIAAHWKYKER 342

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
            +        NG S         +  +  ++SW+  + EWQ+E        EF++++  D
Sbjct: 343 FSA-------NGNS---------DGEMEKKLSWIRQMMEWQKEV---SDPEEFMESLKID 383

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           L  ++VFVF+PRG++  LP G+  +D+AY +H++IGNK V AKVN  +V   + L   ++
Sbjct: 384 LFANKVFVFSPRGDVLELPAGSCPLDFAYKVHSQIGNKCVGAKVNSRMVPIDYKLKTGDI 443

Query: 620 VEIIT 624
           VEIIT
Sbjct: 444 VEIIT 448


>gi|291561450|emb|CBL40249.1| (p)ppGpp synthetase, RelA/SpoT family [butyrate-producing bacterium
           SS3/4]
          Length = 761

 Score =  351 bits (901), Expect = 6e-94,   Method: Compositional matrix adjust.
 Identities = 204/507 (40%), Positives = 303/507 (59%), Gaps = 61/507 (12%)

Query: 126 SPERLWEDLRPTISYLSP-NELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
           SP+ L+ DL  +I    P ++L ++ +A  LA  AH  QKR+SGEP+IIHP+ VA IL +
Sbjct: 21  SPDVLYRDLVASIRKYHPSDDLSMIEKAYQLADNAHKDQKRKSGEPYIIHPLCVAIILAD 80

Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
           LE+D E+IAAGLLHD VEDT V T E++ E FG  V  +V+G TK+++L     K E   
Sbjct: 81  LEMDKETIAAGLLHDVVEDT-VYTEEQLAELFGKEVALLVDGVTKLTQLSWSADKVE--- 136

Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
              ++A++LR+MFLAM +++RVII+KLADRLHNMRTL +M P KQ   A ET+++++PLA
Sbjct: 137 ---MQAENLRKMFLAMAKDIRVIIIKLADRLHNMRTLQYMRPEKQKEKARETIEIYSPLA 193

Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
             LG+ +IK EL++L+  Y     Y +++ ++A   +  +K +++    +   +E+ +  
Sbjct: 194 DRLGISKIKIELDDLALRYLEPNVYKELEEKIALTSEARQKFIDDIISEIKTHMENAE-- 251

Query: 365 DLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
               ++ E+    K  +SIYK +L    +++++  I  +RII+               + 
Sbjct: 252 ----IRCEVNGRVKHFFSIYKKMLNQHKTLDQIYDIFAVRIIV------------DSVKD 295

Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRT 479
           CY  LG++H ++ PIP   KDYIA PKPN YQSLHTTLI     PF        E+QIRT
Sbjct: 296 CYAALGVIHEMYKPIPGRFKDYIAMPKPNMYQSLHTTLIGTNGQPF--------EIQIRT 347

Query: 480 EEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREW 539
            EM   AE GIAAH+  +   +G V                    + A ++SWL  I EW
Sbjct: 348 FEMHRTAEYGIAAHWKYKESGSGQVAA-----------------GDEAKKLSWLRQILEW 390

Query: 540 QEEFVGNMTSREFVDTITRDL--LGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNK 597
           Q++   N   +EF++ I  DL      V+ FTP G++K LP G+T +D+AY IHT +GNK
Sbjct: 391 QQDMSDN---KEFLNAIKSDLDMFSDSVYCFTPTGDVKALPSGSTPIDFAYSIHTAVGNK 447

Query: 598 MVAAKVNGNLVSPTHVLANAEVVEIIT 624
           MV A+VNG LV+  +V+ N + +E++T
Sbjct: 448 MVGARVNGKLVNIDYVIQNGDRIEVMT 474


>gi|197121709|ref|YP_002133660.1| (p)ppGpp synthetase I SpoT/RelA [Anaeromyxobacter sp. K]
 gi|220916506|ref|YP_002491810.1| (p)ppGpp synthetase I SpoT/RelA [Anaeromyxobacter dehalogenans
           2CP-1]
 gi|196171558|gb|ACG72531.1| (p)ppGpp synthetase I, SpoT/RelA [Anaeromyxobacter sp. K]
 gi|219954360|gb|ACL64744.1| (p)ppGpp synthetase I, SpoT/RelA [Anaeromyxobacter dehalogenans
           2CP-1]
          Length = 746

 Score =  351 bits (900), Expect = 7e-94,   Method: Compositional matrix adjust.
 Identities = 198/509 (38%), Positives = 294/509 (57%), Gaps = 48/509 (9%)

Query: 119 SDAFKEDSPERLWE--DLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHP 175
           SDA +   P  L    D+   +S   P+ +L+L+++A + + + H GQ R+SGEP+++HP
Sbjct: 11  SDATRYAGPSTLLRLNDILDRVSGYHPDPDLDLIKKAYVYSAKVHQGQIRKSGEPYLVHP 70

Query: 176 VEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGK 235
           +EVA IL EL+LD  S+  GLLHDT+EDT + T + I E FG  +  +V+G TK+S+   
Sbjct: 71  LEVAGILAELKLDESSVVTGLLHDTIEDT-LATKKEISELFGPEIADLVDGVTKLSQFTA 129

Query: 236 LKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATE 295
              + E       +A++ R+M +AM +++RV++VKLADR HNMRTL  M P  Q  IA E
Sbjct: 130 ANTQEEK------QAENFRKMVVAMAKDIRVLLVKLADRTHNMRTLDAMKPESQERIARE 183

Query: 296 TLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILM 355
           TL ++APLA  LG+  IK+ELE LSF Y    DY+++  +V+   +E E+ + E  +I+ 
Sbjct: 184 TLDIYAPLANRLGIQWIKTELEELSFKYLRPGDYSELNEKVSVRAREKERFVAEVVEIIR 243

Query: 356 KKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGV 415
           +++ +        ++ ++    K  YSIY+ + +      ++  +   R+I+        
Sbjct: 244 RRLAE------AGMQADVSGRVKHVYSIYRKMRQLDVDFEQIQDVVGFRVIVDTVAE--- 294

Query: 416 GPLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEV 475
                    CY  LG VH +W P+P   KDYIA PKPN YQSLHTT++    E   R+EV
Sbjct: 295 ---------CYESLGFVHSLWKPVPGRFKDYIAIPKPNLYQSLHTTVVGPAGE---RIEV 342

Query: 476 QIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNA 535
           QIRT EM  IAE G+AAH++            +  GR  +G  +   +A       WL  
Sbjct: 343 QIRTREMHRIAEEGVAAHWA-----------YKEKGRDGKGAELSRKDAA---SFGWLRQ 388

Query: 536 IREWQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIG 595
           + E+Q +       REF++T+  DL    VFVFTP+G +K+LP+GAT VD+AY IH+EIG
Sbjct: 389 LVEFQRDLA---DPREFLETVKVDLFSDEVFVFTPKGAVKSLPRGATPVDFAYTIHSEIG 445

Query: 596 NKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
              V AKVNG LV   + L N + +EI+T
Sbjct: 446 EHTVGAKVNGKLVPLRYTLKNGDTIEILT 474


>gi|221633684|ref|YP_002522910.1| GTP pyrophosphokinase [Thermomicrobium roseum DSM 5159]
 gi|221157017|gb|ACM06144.1| GTP pyrophosphokinase [Thermomicrobium roseum DSM 5159]
          Length = 720

 Score =  351 bits (900), Expect = 7e-94,   Method: Compositional matrix adjust.
 Identities = 199/488 (40%), Positives = 295/488 (60%), Gaps = 51/488 (10%)

Query: 143 PN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTV 201
           PN +LEL+  A  LA  AH G +RRSGEP++ HP+ VA IL +L+LD E+IAA LLHD +
Sbjct: 10  PNADLELIHHAFELARSAHAGMRRRSGEPYLSHPLAVALILADLQLDQETIAAALLHDVL 69

Query: 202 EDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSV-----QDVKADDLRQM 256
           EDT+V T E++ E FG  V R+V+G   V+KLGK++   EN  V     +  +A+ LR+M
Sbjct: 70  EDTDV-TIEQLRERFGPRVARLVDG---VTKLGKIRLSPENEPVSLEREKIRQAESLRKM 125

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            LAM E+V V+++KLADRLHNMRTL H+PP KQ  IA ET++++APLA  LG+ Q+K+EL
Sbjct: 126 LLAMAEDVGVVLIKLADRLHNMRTLDHLPPEKQRRIARETMEIYAPLANRLGIGQLKAEL 185

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+L+F Y   + Y  + R +     + E+ L+E  + + + + D     ++T +      
Sbjct: 186 EDLAFKYLEPQTYETIARALESRGHDREQYLQEVIEQVKRALADAGIRAVVTGRE----- 240

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K   SI + + + + + +E+  +  +R+I+              Q+ CY  L ++HG+W
Sbjct: 241 -KHIASIARKMREKQRNFDEIYDVLGIRVIV------------DEQRDCYAALAIIHGMW 287

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            PIP    DYIA PK N Y+SLHT +I         LEVQIRT EM   AE GIAAH+  
Sbjct: 288 HPIPGQFDDYIANPKENLYRSLHTAVIG---PRGIPLEVQIRTHEMHREAEYGIAAHWRY 344

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +          +P+            + +I  +I+W   I EW++E    + ++EFVD++
Sbjct: 345 K-------EQLKPDS----------GDRSIEAKIAWFRQILEWRDEL---LDAQEFVDSV 384

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
            +DLL   ++VFTP+G++  LP GAT +D+AY IHTE+G++ V AKVNG +V   + L N
Sbjct: 385 KQDLLPEMIYVFTPKGDVVELPAGATPIDFAYRIHTEVGHQCVGAKVNGQIVPLNYKLQN 444

Query: 617 AEVVEIIT 624
            +VV+IIT
Sbjct: 445 GQVVQIIT 452


>gi|153854672|ref|ZP_01995922.1| hypothetical protein DORLON_01920 [Dorea longicatena DSM 13814]
 gi|149752776|gb|EDM62707.1| RelA/SpoT family protein [Dorea longicatena DSM 13814]
          Length = 781

 Score =  351 bits (900), Expect = 8e-94,   Method: Compositional matrix adjust.
 Identities = 202/503 (40%), Positives = 303/503 (60%), Gaps = 50/503 (9%)

Query: 125 DSPERLWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILG 183
           + P RL++ L   I    P+ ++ ++ +A  LA +AH  Q+R+SGEP+IIHP+ VA IL 
Sbjct: 42  EDPNRLYDMLIARIRKYHPSTDVSMIEKAYKLAVKAHGDQRRKSGEPYIIHPLWVAIILA 101

Query: 184 ELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENH 243
           +LE+D E+IAAG+LHD VEDT   T E I  EFG  V  +V+G   V+KLG+L   ++  
Sbjct: 102 DLEMDKETIAAGMLHDVVEDTKF-TEEDIRREFGDEVALLVDG---VTKLGRLSYSSDKL 157

Query: 244 SVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPL 303
            VQ   A++LR+MFLAM +++RVII+KLADRLHNMRTL  M P KQ   A ET+ ++AP+
Sbjct: 158 EVQ---AENLRKMFLAMAKDIRVIIIKLADRLHNMRTLQFMTPAKQKEKAKETMDIYAPI 214

Query: 304 AKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQF 363
           A+ LG+ +IK+EL++L+  Y+  E +  +  ++     E E+ +E+  + +   +++   
Sbjct: 215 AQRLGISKIKTELDDLALKYSQPEVFYDLVNQINARKTEREEFVEQIVEEVSTHMKN--- 271

Query: 364 LDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQ 423
                +K E+    K  +SIYK ++    +++++  +  +RII++              +
Sbjct: 272 ---ANIKAEVNGRVKHFFSIYKKMVNQDKTVDQIYDLFAVRIIVE------------SVK 316

Query: 424 ICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMD 483
            CY  LG++H ++TPIP   KDYIA PKPN YQSLHTTL+  + +     E+QIRTEEM 
Sbjct: 317 DCYAALGVIHEMYTPIPGRFKDYIAMPKPNMYQSLHTTLMSSVGQP---FEIQIRTEEMH 373

Query: 484 LIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEF 543
             AE GIAAH+  +               S  GK      A    ++SWL  I EWQ + 
Sbjct: 374 KTAEYGIAAHWKYK--------------ESNDGKKSV--EAQEEEKLSWLRQILEWQRDM 417

Query: 544 VGNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAA 601
             N   REF++ I    DL    V+ FTP+G++KNLP G+T +D+AY IH+ +GNKMV A
Sbjct: 418 SDN---REFLNLIKGDLDLFAEDVYCFTPQGDVKNLPNGSTPIDFAYAIHSAVGNKMVGA 474

Query: 602 KVNGNLVSPTHVLANAEVVEIIT 624
           +VNG LV+  + + N + +EI+T
Sbjct: 475 RVNGKLVNIDYKIQNGDRIEILT 497


>gi|49481489|ref|YP_038457.1| GTP diphosphokinase [Bacillus thuringiensis serovar konkukian str.
           97-27]
 gi|228987658|ref|ZP_04147772.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar tochigiensis
           BGSC 4Y1]
 gi|49333045|gb|AAT63691.1| GTP diphosphokinase (GTP pyrophosphokinase) [Bacillus thuringiensis
           serovar konkukian str. 97-27]
 gi|228772118|gb|EEM20570.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar tochigiensis
           BGSC 4Y1]
          Length = 727

 Score =  351 bits (900), Expect = 8e-94,   Method: Compositional matrix adjust.
 Identities = 204/496 (41%), Positives = 291/496 (58%), Gaps = 50/496 (10%)

Query: 134 LRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIA 193
           L     YL   ++ELV RA   A +AH  Q R+SGEP+IIHP++VA IL +L +D  +++
Sbjct: 13  LEKASQYLVDEDIELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDPATVS 72

Query: 194 AGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDL 253
           AG LHD VEDT + T E IE EF   +  +V+G   V+KLGK+K K+  H  Q  +A++ 
Sbjct: 73  AGFLHDVVEDTEI-TLEDIEREFNKEIAMLVDG---VTKLGKIKYKS--HEQQ--QAENH 124

Query: 254 RQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIK 313
           R+MF+AM +++RVI++KLADRLHNMRTL H+P  KQ  IA ETL++FAPLA  LG+  IK
Sbjct: 125 RKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGISTIK 184

Query: 314 SELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEI 373
            ELE+ S  Y N + Y     R+ +L K    E EE    +M  I +   LD + ++ EI
Sbjct: 185 WELEDTSLRYLNPQQYY----RIVNLMKRKRAEREEYLDEVMTGIREK--LDEVAIQPEI 238

Query: 374 RSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVH 433
               K  YSIY+ +       NE+  +  +R+++            +  + CY VLG++H
Sbjct: 239 SGRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVV------------NSIKDCYAVLGIIH 286

Query: 434 GIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAH 493
             W P+P   KDYIA PK N YQSLHTT+I    +    LEVQIRT+EM  IAE GIAAH
Sbjct: 287 TCWKPMPGRFKDYIAMPKANLYQSLHTTVIGPKGDP---LEVQIRTKEMHEIAEFGIAAH 343

Query: 494 YSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFV 553
           ++ +                  GKT       +  +++W   I EWQ E      + EF+
Sbjct: 344 WAYK-----------------EGKT-AETTGTLEKKLTWFRQILEWQNE---ASNAEEFM 382

Query: 554 DTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHV 613
           +++  DL    VFVFTP+G++  LP G+  +D+AY +H+EIGNK + AKVNG +V+  + 
Sbjct: 383 ESLKIDLFSDMVFVFTPKGDVMELPLGSVPIDFAYRVHSEIGNKTIGAKVNGKMVTLDYK 442

Query: 614 LANAEVVEIITYNVSF 629
           L   +++EI+T   S+
Sbjct: 443 LKTGDIIEILTSKHSY 458


>gi|229186646|ref|ZP_04313807.1| GTP pyrophosphokinase [Bacillus cereus BGSC 6E1]
 gi|228596905|gb|EEK54564.1| GTP pyrophosphokinase [Bacillus cereus BGSC 6E1]
          Length = 727

 Score =  351 bits (900), Expect = 8e-94,   Method: Compositional matrix adjust.
 Identities = 204/496 (41%), Positives = 291/496 (58%), Gaps = 50/496 (10%)

Query: 134 LRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIA 193
           L     YL   ++ELV RA   A +AH  Q R+SGEP+IIHP++VA IL +L +D  +++
Sbjct: 13  LEKASQYLVDEDIELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDPATVS 72

Query: 194 AGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDL 253
           AG LHD VEDT + T E IE EF   +  +V+G   V+KLGK+K K+  H  Q  +A++ 
Sbjct: 73  AGFLHDVVEDTEI-TLEDIEREFNKEIAMLVDG---VTKLGKIKYKS--HEQQ--QAENH 124

Query: 254 RQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIK 313
           R+MF+AM +++RVI++KLADRLHNMRTL H+P  KQ  IA ETL++FAPLA  LG+  IK
Sbjct: 125 RKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGISTIK 184

Query: 314 SELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEI 373
            ELE+ S  Y N + Y     R+ +L K    E EE    +M  I +   LD + ++ EI
Sbjct: 185 WELEDTSLRYLNPQQYY----RIVNLMKRKRAEREEYLDEVMTGIREK--LDEVAIQPEI 238

Query: 374 RSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVH 433
               K  YSIY+ +       NE+  +  +R+++            +  + CY VLG++H
Sbjct: 239 SGRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVV------------NSIKDCYAVLGIIH 286

Query: 434 GIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAH 493
             W P+P   KDYIA PK N YQSLHTT+I    +    LEVQIRT+EM  IAE GIAAH
Sbjct: 287 TCWKPMPGRFKDYIAMPKANLYQSLHTTVIGPKGDP---LEVQIRTKEMHEIAEFGIAAH 343

Query: 494 YSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFV 553
           ++ +                  GKT       +  +++W   I EWQ E      + EF+
Sbjct: 344 WAYK-----------------EGKT-AETTGTLEKKLTWFRQILEWQNE---ASNAEEFM 382

Query: 554 DTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHV 613
           +++  DL    VFVFTP+G++  LP G+  +D+AY +H+EIGNK + AKVNG +V+  + 
Sbjct: 383 ESLKIDLFSDMVFVFTPKGDVMELPLGSVPIDFAYRVHSEIGNKTIGAKVNGKMVTLDYK 442

Query: 614 LANAEVVEIITYNVSF 629
           L   +++EI+T   S+
Sbjct: 443 LKTGDIIEILTSKHSY 458


>gi|42783537|ref|NP_980784.1| GTP pyrophosphokinase [Bacillus cereus ATCC 10987]
 gi|384182226|ref|YP_005567988.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar finitimus
           YBT-020]
 gi|402555460|ref|YP_006596731.1| GTP pyrophosphokinase [Bacillus cereus FRI-35]
 gi|42739466|gb|AAS43392.1| GTP pyrophosphokinase [Bacillus cereus ATCC 10987]
 gi|324328310|gb|ADY23570.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar finitimus
           YBT-020]
 gi|401796670|gb|AFQ10529.1| GTP pyrophosphokinase [Bacillus cereus FRI-35]
          Length = 727

 Score =  351 bits (900), Expect = 8e-94,   Method: Compositional matrix adjust.
 Identities = 204/496 (41%), Positives = 292/496 (58%), Gaps = 50/496 (10%)

Query: 134 LRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIA 193
           L     YL   ++ELV RA   A +AH  Q R+SGEP+IIHP++VA IL +L +D  +++
Sbjct: 13  LEKASQYLVDEDIELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDPATVS 72

Query: 194 AGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDL 253
           AG LHD VEDT + T E IE EF   +  +V+G   V+KLGK+K K+  H  Q  +A++ 
Sbjct: 73  AGFLHDVVEDTEI-TLEDIEREFNKEIAMLVDG---VTKLGKIKYKS--HEQQ--QAENH 124

Query: 254 RQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIK 313
           R+MF+AM +++RVI++KLADRLHNMRTL H+P  KQ  IA ETL++FAPLA  LG+  IK
Sbjct: 125 RKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGISTIK 184

Query: 314 SELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEI 373
            ELE+ S  Y N + Y     R+ +L K    E EE  + +M  I +   LD + ++ EI
Sbjct: 185 WELEDTSLRYLNPQQYY----RIVNLMKRKRAEREEYLEEVMTGIREK--LDEVAIQPEI 238

Query: 374 RSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVH 433
               K  YSIY+ +       NE+  +  +R+++            +  + CY VLG++H
Sbjct: 239 SGRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVV------------NSIKDCYAVLGIIH 286

Query: 434 GIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAH 493
             W P+P   KDYIA PK N YQSLHTT+I    +    LEVQIRT+EM  IAE GIAAH
Sbjct: 287 TCWKPMPGRFKDYIAMPKANLYQSLHTTVIGPKGDP---LEVQIRTKEMHEIAEFGIAAH 343

Query: 494 YSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFV 553
           ++ +                  GKT       +  +++W   I EWQ E      + EF+
Sbjct: 344 WAYK-----------------EGKT-AETAGTLEKKLTWFRQILEWQNE---ASNAEEFM 382

Query: 554 DTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHV 613
           +++  DL    VFVFTP+G++  LP G+  +D+AY +H+EIGNK + AKVNG +V+  + 
Sbjct: 383 ESLKIDLFSDMVFVFTPKGDVMELPLGSVPIDFAYRVHSEIGNKTIGAKVNGKMVTLDYK 442

Query: 614 LANAEVVEIITYNVSF 629
           L   +++EI+T   S+
Sbjct: 443 LKTGDIIEILTSKHSY 458


>gi|29376496|ref|NP_815650.1| GTP pyrophosphokinase [Enterococcus faecalis V583]
 gi|227519316|ref|ZP_03949365.1| GTP pyrophosphokinase [Enterococcus faecalis TX0104]
 gi|229545443|ref|ZP_04434168.1| GTP pyrophosphokinase [Enterococcus faecalis TX1322]
 gi|229549687|ref|ZP_04438412.1| GTP pyrophosphokinase [Enterococcus faecalis ATCC 29200]
 gi|255972385|ref|ZP_05422971.1| conserved hypothetical protein [Enterococcus faecalis T1]
 gi|255975488|ref|ZP_05426074.1| RelA/SpoT protein [Enterococcus faecalis T2]
 gi|256762903|ref|ZP_05503483.1| RelA/SpoT protein [Enterococcus faecalis T3]
 gi|256853488|ref|ZP_05558858.1| GTP pyrophosphokinase [Enterococcus faecalis T8]
 gi|256959287|ref|ZP_05563458.1| RelA/SpoT protein [Enterococcus faecalis DS5]
 gi|256964754|ref|ZP_05568925.1| RelA/SpoT protein [Enterococcus faecalis HIP11704]
 gi|257079353|ref|ZP_05573714.1| RelA/SpoT protein [Enterococcus faecalis JH1]
 gi|257082207|ref|ZP_05576568.1| RelA/SpoT protein [Enterococcus faecalis E1Sol]
 gi|257084825|ref|ZP_05579186.1| RelA/SpoT protein [Enterococcus faecalis Fly1]
 gi|257087178|ref|ZP_05581539.1| RelA/SpoT protein [Enterococcus faecalis D6]
 gi|257419654|ref|ZP_05596648.1| RelA/SpoT family protein [Enterococcus faecalis T11]
 gi|294779745|ref|ZP_06745132.1| GTP diphosphokinase [Enterococcus faecalis PC1.1]
 gi|300860169|ref|ZP_07106256.1| GTP diphosphokinase [Enterococcus faecalis TUSoD Ef11]
 gi|307268139|ref|ZP_07549526.1| GTP diphosphokinase [Enterococcus faecalis TX4248]
 gi|307272834|ref|ZP_07554081.1| GTP diphosphokinase [Enterococcus faecalis TX0855]
 gi|307275913|ref|ZP_07557046.1| GTP diphosphokinase [Enterococcus faecalis TX2134]
 gi|307277696|ref|ZP_07558782.1| GTP diphosphokinase [Enterococcus faecalis TX0860]
 gi|307287881|ref|ZP_07567914.1| GTP diphosphokinase [Enterococcus faecalis TX0109]
 gi|307295910|ref|ZP_07575742.1| GTP diphosphokinase [Enterococcus faecalis TX0411]
 gi|312900879|ref|ZP_07760173.1| GTP diphosphokinase [Enterococcus faecalis TX0470]
 gi|312951286|ref|ZP_07770187.1| GTP diphosphokinase [Enterococcus faecalis TX0102]
 gi|384513600|ref|YP_005708693.1| GTP diphosphokinase [Enterococcus faecalis OG1RF]
 gi|384518976|ref|YP_005706281.1| GTP pyrophosphokinase [Enterococcus faecalis 62]
 gi|397700204|ref|YP_006537992.1| GTP pyrophosphokinase [Enterococcus faecalis D32]
 gi|422686386|ref|ZP_16744584.1| GTP diphosphokinase [Enterococcus faecalis TX4000]
 gi|422692692|ref|ZP_16750707.1| GTP diphosphokinase [Enterococcus faecalis TX0031]
 gi|422697189|ref|ZP_16755135.1| GTP diphosphokinase [Enterococcus faecalis TX1346]
 gi|422704878|ref|ZP_16762688.1| GTP diphosphokinase [Enterococcus faecalis TX1302]
 gi|422711426|ref|ZP_16768355.1| GTP diphosphokinase [Enterococcus faecalis TX0027]
 gi|422713284|ref|ZP_16770037.1| GTP diphosphokinase [Enterococcus faecalis TX0309A]
 gi|422717180|ref|ZP_16773870.1| GTP diphosphokinase [Enterococcus faecalis TX0309B]
 gi|422719465|ref|ZP_16776106.1| GTP diphosphokinase [Enterococcus faecalis TX0017]
 gi|422724016|ref|ZP_16780506.1| GTP diphosphokinase [Enterococcus faecalis TX2137]
 gi|422725202|ref|ZP_16781670.1| GTP diphosphokinase [Enterococcus faecalis TX0312]
 gi|422730242|ref|ZP_16786635.1| GTP diphosphokinase [Enterococcus faecalis TX0012]
 gi|422732553|ref|ZP_16788884.1| GTP diphosphokinase [Enterococcus faecalis TX0645]
 gi|422735767|ref|ZP_16792033.1| GTP diphosphokinase [Enterococcus faecalis TX1341]
 gi|422741846|ref|ZP_16795868.1| GTP diphosphokinase [Enterococcus faecalis TX2141]
 gi|424672845|ref|ZP_18109788.1| GTP diphosphokinase [Enterococcus faecalis 599]
 gi|424678338|ref|ZP_18115178.1| GTP diphosphokinase [Enterococcus faecalis ERV103]
 gi|424682195|ref|ZP_18118972.1| GTP diphosphokinase [Enterococcus faecalis ERV116]
 gi|424685423|ref|ZP_18122121.1| GTP diphosphokinase [Enterococcus faecalis ERV129]
 gi|424688183|ref|ZP_18124799.1| GTP diphosphokinase [Enterococcus faecalis ERV25]
 gi|424691052|ref|ZP_18127579.1| GTP diphosphokinase [Enterococcus faecalis ERV31]
 gi|424694635|ref|ZP_18131031.1| GTP diphosphokinase [Enterococcus faecalis ERV37]
 gi|424695820|ref|ZP_18132193.1| GTP diphosphokinase [Enterococcus faecalis ERV41]
 gi|424702067|ref|ZP_18138230.1| GTP diphosphokinase [Enterococcus faecalis ERV62]
 gi|424704288|ref|ZP_18140390.1| GTP diphosphokinase [Enterococcus faecalis ERV63]
 gi|424712754|ref|ZP_18144923.1| GTP diphosphokinase [Enterococcus faecalis ERV65]
 gi|424716877|ref|ZP_18146176.1| GTP diphosphokinase [Enterococcus faecalis ERV68]
 gi|424722259|ref|ZP_18151323.1| GTP diphosphokinase [Enterococcus faecalis ERV72]
 gi|424722967|ref|ZP_18151987.1| GTP diphosphokinase [Enterococcus faecalis ERV73]
 gi|424728350|ref|ZP_18156957.1| GTP diphosphokinase [Enterococcus faecalis ERV81]
 gi|424740517|ref|ZP_18168899.1| GTP diphosphokinase [Enterococcus faecalis ERV85]
 gi|424749874|ref|ZP_18177951.1| GTP diphosphokinase [Enterococcus faecalis ERV93]
 gi|424759337|ref|ZP_18187003.1| GTP diphosphokinase [Enterococcus faecalis R508]
 gi|428767377|ref|YP_007153488.1| GTP pyrophosphokinase [Enterococcus faecalis str. Symbioflor 1]
 gi|430360791|ref|ZP_19426449.1| RelA/SpoT family protein [Enterococcus faecalis OG1X]
 gi|430367252|ref|ZP_19427815.1| RelA/SpoT family protein [Enterococcus faecalis M7]
 gi|29343960|gb|AAO81720.1| GTP pyrophosphokinase [Enterococcus faecalis V583]
 gi|227073245|gb|EEI11208.1| GTP pyrophosphokinase [Enterococcus faecalis TX0104]
 gi|229305167|gb|EEN71163.1| GTP pyrophosphokinase [Enterococcus faecalis ATCC 29200]
 gi|229309359|gb|EEN75346.1| GTP pyrophosphokinase [Enterococcus faecalis TX1322]
 gi|255963403|gb|EET95879.1| conserved hypothetical protein [Enterococcus faecalis T1]
 gi|255968360|gb|EET98982.1| RelA/SpoT protein [Enterococcus faecalis T2]
 gi|256684154|gb|EEU23849.1| RelA/SpoT protein [Enterococcus faecalis T3]
 gi|256711947|gb|EEU26985.1| GTP pyrophosphokinase [Enterococcus faecalis T8]
 gi|256949783|gb|EEU66415.1| RelA/SpoT protein [Enterococcus faecalis DS5]
 gi|256955250|gb|EEU71882.1| RelA/SpoT protein [Enterococcus faecalis HIP11704]
 gi|256987383|gb|EEU74685.1| RelA/SpoT protein [Enterococcus faecalis JH1]
 gi|256990237|gb|EEU77539.1| RelA/SpoT protein [Enterococcus faecalis E1Sol]
 gi|256992855|gb|EEU80157.1| RelA/SpoT protein [Enterococcus faecalis Fly1]
 gi|256995208|gb|EEU82510.1| RelA/SpoT protein [Enterococcus faecalis D6]
 gi|257161482|gb|EEU91442.1| RelA/SpoT family protein [Enterococcus faecalis T11]
 gi|294453119|gb|EFG21534.1| GTP diphosphokinase [Enterococcus faecalis PC1.1]
 gi|295113238|emb|CBL31875.1| (p)ppGpp synthetase, RelA/SpoT family [Enterococcus sp. 7L76]
 gi|300849208|gb|EFK76958.1| GTP diphosphokinase [Enterococcus faecalis TUSoD Ef11]
 gi|306496241|gb|EFM65820.1| GTP diphosphokinase [Enterococcus faecalis TX0411]
 gi|306501026|gb|EFM70333.1| GTP diphosphokinase [Enterococcus faecalis TX0109]
 gi|306505575|gb|EFM74759.1| GTP diphosphokinase [Enterococcus faecalis TX0860]
 gi|306507243|gb|EFM76380.1| GTP diphosphokinase [Enterococcus faecalis TX2134]
 gi|306510448|gb|EFM79471.1| GTP diphosphokinase [Enterococcus faecalis TX0855]
 gi|306515529|gb|EFM84057.1| GTP diphosphokinase [Enterococcus faecalis TX4248]
 gi|310630722|gb|EFQ14005.1| GTP diphosphokinase [Enterococcus faecalis TX0102]
 gi|311291978|gb|EFQ70534.1| GTP diphosphokinase [Enterococcus faecalis TX0470]
 gi|315025979|gb|EFT37911.1| GTP diphosphokinase [Enterococcus faecalis TX2137]
 gi|315028900|gb|EFT40832.1| GTP diphosphokinase [Enterococcus faecalis TX4000]
 gi|315033291|gb|EFT45223.1| GTP diphosphokinase [Enterococcus faecalis TX0017]
 gi|315034529|gb|EFT46461.1| GTP diphosphokinase [Enterococcus faecalis TX0027]
 gi|315143404|gb|EFT87420.1| GTP diphosphokinase [Enterococcus faecalis TX2141]
 gi|315149223|gb|EFT93239.1| GTP diphosphokinase [Enterococcus faecalis TX0012]
 gi|315152592|gb|EFT96608.1| GTP diphosphokinase [Enterococcus faecalis TX0031]
 gi|315159888|gb|EFU03905.1| GTP diphosphokinase [Enterococcus faecalis TX0312]
 gi|315161370|gb|EFU05387.1| GTP diphosphokinase [Enterococcus faecalis TX0645]
 gi|315163667|gb|EFU07684.1| GTP diphosphokinase [Enterococcus faecalis TX1302]
 gi|315167501|gb|EFU11518.1| GTP diphosphokinase [Enterococcus faecalis TX1341]
 gi|315174315|gb|EFU18332.1| GTP diphosphokinase [Enterococcus faecalis TX1346]
 gi|315574555|gb|EFU86746.1| GTP diphosphokinase [Enterococcus faecalis TX0309B]
 gi|315581803|gb|EFU93994.1| GTP diphosphokinase [Enterococcus faecalis TX0309A]
 gi|323481109|gb|ADX80548.1| GTP pyrophosphokinase [Enterococcus faecalis 62]
 gi|327535489|gb|AEA94323.1| GTP diphosphokinase [Enterococcus faecalis OG1RF]
 gi|397336843|gb|AFO44515.1| GTP pyrophosphokinase [Enterococcus faecalis D32]
 gi|402349566|gb|EJU84510.1| GTP diphosphokinase [Enterococcus faecalis ERV116]
 gi|402351666|gb|EJU86546.1| GTP diphosphokinase [Enterococcus faecalis ERV103]
 gi|402353351|gb|EJU88183.1| GTP diphosphokinase [Enterococcus faecalis 599]
 gi|402358773|gb|EJU93433.1| GTP diphosphokinase [Enterococcus faecalis ERV129]
 gi|402361575|gb|EJU96125.1| GTP diphosphokinase [Enterococcus faecalis ERV25]
 gi|402362896|gb|EJU97408.1| GTP diphosphokinase [Enterococcus faecalis ERV31]
 gi|402370073|gb|EJV04313.1| GTP diphosphokinase [Enterococcus faecalis ERV62]
 gi|402370270|gb|EJV04490.1| GTP diphosphokinase [Enterococcus faecalis ERV37]
 gi|402379160|gb|EJV12977.1| GTP diphosphokinase [Enterococcus faecalis ERV41]
 gi|402379631|gb|EJV13423.1| GTP diphosphokinase [Enterococcus faecalis ERV65]
 gi|402382377|gb|EJV16044.1| GTP diphosphokinase [Enterococcus faecalis ERV63]
 gi|402386637|gb|EJV20139.1| GTP diphosphokinase [Enterococcus faecalis ERV68]
 gi|402389444|gb|EJV22840.1| GTP diphosphokinase [Enterococcus faecalis ERV72]
 gi|402394029|gb|EJV27227.1| GTP diphosphokinase [Enterococcus faecalis ERV81]
 gi|402400374|gb|EJV33205.1| GTP diphosphokinase [Enterococcus faecalis ERV73]
 gi|402401938|gb|EJV34677.1| GTP diphosphokinase [Enterococcus faecalis ERV85]
 gi|402404795|gb|EJV37408.1| GTP diphosphokinase [Enterococcus faecalis R508]
 gi|402407443|gb|EJV39973.1| GTP diphosphokinase [Enterococcus faecalis ERV93]
 gi|427185550|emb|CCO72774.1| GTP pyrophosphokinase [Enterococcus faecalis str. Symbioflor 1]
 gi|429512728|gb|ELA02326.1| RelA/SpoT family protein [Enterococcus faecalis OG1X]
 gi|429516725|gb|ELA06204.1| RelA/SpoT family protein [Enterococcus faecalis M7]
          Length = 737

 Score =  351 bits (900), Expect = 8e-94,   Method: Compositional matrix adjust.
 Identities = 197/492 (40%), Positives = 288/492 (58%), Gaps = 49/492 (9%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           +Y+ P  +ELV++AL  A +AH+GQ R+SGEP+IIHP++VA IL EL +D  ++A G LH
Sbjct: 18  TYMGPEHVELVQKALTYAEKAHEGQVRQSGEPYIIHPIQVAGILAELHMDPHTVATGFLH 77

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT+V T + ++EEFG  +  +V+G   V+KLGK+K K+    +    A++ R+M L
Sbjct: 78  DVVEDTDV-TLDDLKEEFGEDIAMLVDG---VTKLGKIKYKSHEEQL----AENHRKMLL 129

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM +++RVI+VKLADRLHNMRTL H+   KQ  IA ETL+++APLA  LG+ +IK ELE+
Sbjct: 130 AMAQDLRVIMVKLADRLHNMRTLKHLREDKQRRIAQETLEIYAPLAHRLGISRIKWELED 189

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
            +  Y N   Y ++   +     E E  + EA + +    ED      + +  EI    K
Sbjct: 190 TALRYINPNQYYRIVNLMQSKRDEREAYVAEAVEDIRLATED------LEIYAEIYGRPK 243

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIY+ +   +   NE+  +  +R+I+               + CY VLG +H  WTP
Sbjct: 244 HIYSIYRKMKDQKKQFNEIYDLLAIRVIV------------DSIKDCYAVLGAIHTRWTP 291

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PK N YQS+HTT+I         +EVQIRT EM  IAE G+AAH++ + 
Sbjct: 292 MPGRFKDYIAMPKANMYQSIHTTVIG---PKGNPVEVQIRTHEMHQIAEFGVAAHWAYK- 347

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                            GK   +    +  ++ W + I E Q+E   +  + EF+  +  
Sbjct: 348 ----------------EGKAEKIETDELTKQVDWFHEIIELQDE---SYDASEFMQGVKE 388

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           D+   +V+VFTP G++  LPKG+  +D+AY IHTEIGNK   AKVNG +V   +VL N +
Sbjct: 389 DIFSDKVYVFTPSGDVTELPKGSGPLDFAYSIHTEIGNKTTGAKVNGKMVQLDYVLKNGD 448

Query: 619 VVEIITYNVSFS 630
           ++E++T   SF 
Sbjct: 449 IIEVLTSPNSFG 460


>gi|257422238|ref|ZP_05599228.1| GTP pyrophosphokinase [Enterococcus faecalis X98]
 gi|422705431|ref|ZP_16763233.1| GTP diphosphokinase [Enterococcus faecalis TX0043]
 gi|257164062|gb|EEU94022.1| GTP pyrophosphokinase [Enterococcus faecalis X98]
 gi|315157277|gb|EFU01294.1| GTP diphosphokinase [Enterococcus faecalis TX0043]
          Length = 737

 Score =  351 bits (900), Expect = 8e-94,   Method: Compositional matrix adjust.
 Identities = 197/492 (40%), Positives = 288/492 (58%), Gaps = 49/492 (9%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           +Y+ P  +ELV++AL  A +AH+GQ R+SGEP+IIHP++VA IL EL +D  ++A G LH
Sbjct: 18  TYMGPEHVELVQKALTYAEKAHEGQVRQSGEPYIIHPIQVAGILAELHMDPHTVATGFLH 77

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT+V T + ++EEFG  +  +V+G   V+KLGK+K K+    +    A++ R+M L
Sbjct: 78  DVVEDTDV-TLDDLKEEFGEDIAMLVDG---VTKLGKIKYKSHEEQL----AENHRKMLL 129

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM +++RVI+VKLADRLHNMRTL H+   KQ  IA ETL+++APLA  LG+ +IK ELE+
Sbjct: 130 AMAQDLRVIMVKLADRLHNMRTLKHLREDKQRRIAQETLEIYAPLAHRLGISRIKWELED 189

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
            +  Y N   Y ++   +     E E  + EA + +    ED      + +  EI    K
Sbjct: 190 TALRYINPNQYYRIVNLMQSKRDEREAYVAEAVEDIRLATED------LEIYAEIYGRPK 243

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIY+ +   +   NE+  +  +R+I+               + CY VLG +H  WTP
Sbjct: 244 HIYSIYRKMKDQKKQFNEIYDLLAIRVIV------------DSIKDCYAVLGAIHTRWTP 291

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PK N YQS+HTT+I         +EVQIRT EM  IAE G+AAH++ + 
Sbjct: 292 MPGRFKDYIAMPKANMYQSIHTTVIG---PKGNPVEVQIRTHEMHQIAEFGVAAHWAYK- 347

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                            GK   +    +  ++ W + I E Q+E   +  + EF+  +  
Sbjct: 348 ----------------EGKAEKIETDELTKQVDWFHEIIELQDE---SYDASEFMQGVKE 388

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           D+   +V+VFTP G++  LPKG+  +D+AY IHTEIGNK   AKVNG +V   +VL N +
Sbjct: 389 DIFSDKVYVFTPSGDVTELPKGSGPLDFAYSIHTEIGNKTTGAKVNGKMVQLDYVLKNGD 448

Query: 619 VVEIITYNVSFS 630
           ++E++T   SF 
Sbjct: 449 IIEVLTSPNSFG 460


>gi|47566596|ref|ZP_00237418.1| GTP pyrophosphokinase [Bacillus cereus G9241]
 gi|118479564|ref|YP_896715.1| GTP diphosphokinase [Bacillus thuringiensis str. Al Hakam]
 gi|196034529|ref|ZP_03101938.1| GTP diphosphokinase [Bacillus cereus W]
 gi|196039332|ref|ZP_03106638.1| GTP diphosphokinase [Bacillus cereus NVH0597-99]
 gi|196044908|ref|ZP_03112142.1| GTP diphosphokinase [Bacillus cereus 03BB108]
 gi|206975952|ref|ZP_03236862.1| GTP diphosphokinase [Bacillus cereus H3081.97]
 gi|217961898|ref|YP_002340468.1| GTP diphosphokinase [Bacillus cereus AH187]
 gi|218905602|ref|YP_002453436.1| GTP diphosphokinase [Bacillus cereus AH820]
 gi|222097852|ref|YP_002531909.1| gtp diphosphokinase (gtp pyrophosphokinase) [Bacillus cereus Q1]
 gi|225866388|ref|YP_002751766.1| GTP diphosphokinase [Bacillus cereus 03BB102]
 gi|228917043|ref|ZP_04080603.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|228929452|ref|ZP_04092473.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228935727|ref|ZP_04098540.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228948121|ref|ZP_04110405.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|229093478|ref|ZP_04224581.1| GTP pyrophosphokinase [Bacillus cereus Rock3-42]
 gi|229123948|ref|ZP_04253140.1| GTP pyrophosphokinase [Bacillus cereus 95/8201]
 gi|229141146|ref|ZP_04269687.1| GTP pyrophosphokinase [Bacillus cereus BDRD-ST26]
 gi|229158022|ref|ZP_04286093.1| GTP pyrophosphokinase [Bacillus cereus ATCC 4342]
 gi|229198534|ref|ZP_04325238.1| GTP pyrophosphokinase [Bacillus cereus m1293]
 gi|254724667|ref|ZP_05186450.1| GTP diphosphokinase (GTP pyrophosphokinase) [Bacillus anthracis
           str. A1055]
 gi|375286411|ref|YP_005106850.1| GTP pyrophosphokinase [Bacillus cereus NC7401]
 gi|376268304|ref|YP_005121016.1| GTP pyrophosphokinase [Bacillus cereus F837/76]
 gi|423354899|ref|ZP_17332524.1| GTP pyrophosphokinase [Bacillus cereus IS075]
 gi|423373632|ref|ZP_17350971.1| GTP pyrophosphokinase [Bacillus cereus AND1407]
 gi|423549853|ref|ZP_17526180.1| GTP pyrophosphokinase [Bacillus cereus ISP3191]
 gi|423570646|ref|ZP_17546891.1| GTP pyrophosphokinase [Bacillus cereus MSX-A12]
 gi|423573914|ref|ZP_17550033.1| GTP pyrophosphokinase [Bacillus cereus MSX-D12]
 gi|423603933|ref|ZP_17579826.1| GTP pyrophosphokinase [Bacillus cereus VD102]
 gi|47556626|gb|EAL14958.1| GTP pyrophosphokinase [Bacillus cereus G9241]
 gi|118418789|gb|ABK87208.1| GTP diphosphokinase [Bacillus thuringiensis str. Al Hakam]
 gi|195993071|gb|EDX57030.1| GTP diphosphokinase [Bacillus cereus W]
 gi|196024396|gb|EDX63069.1| GTP diphosphokinase [Bacillus cereus 03BB108]
 gi|196029959|gb|EDX68560.1| GTP diphosphokinase [Bacillus cereus NVH0597-99]
 gi|206745704|gb|EDZ57101.1| GTP diphosphokinase [Bacillus cereus H3081.97]
 gi|217066579|gb|ACJ80829.1| GTP diphosphokinase [Bacillus cereus AH187]
 gi|218537532|gb|ACK89930.1| GTP diphosphokinase [Bacillus cereus AH820]
 gi|221241910|gb|ACM14620.1| GTP diphosphokinase (GTP pyrophosphokinase) [Bacillus cereus Q1]
 gi|225788454|gb|ACO28671.1| GTP diphosphokinase [Bacillus cereus 03BB102]
 gi|228585037|gb|EEK43151.1| GTP pyrophosphokinase [Bacillus cereus m1293]
 gi|228625475|gb|EEK82231.1| GTP pyrophosphokinase [Bacillus cereus ATCC 4342]
 gi|228642309|gb|EEK98599.1| GTP pyrophosphokinase [Bacillus cereus BDRD-ST26]
 gi|228659250|gb|EEL14898.1| GTP pyrophosphokinase [Bacillus cereus 95/8201]
 gi|228689949|gb|EEL43753.1| GTP pyrophosphokinase [Bacillus cereus Rock3-42]
 gi|228811479|gb|EEM57816.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228823965|gb|EEM69784.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228830240|gb|EEM75856.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228842650|gb|EEM87738.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|358354938|dbj|BAL20110.1| GTP pyrophosphokinase [Bacillus cereus NC7401]
 gi|364514104|gb|AEW57503.1| GTP pyrophosphokinase [Bacillus cereus F837/76]
 gi|401085783|gb|EJP94019.1| GTP pyrophosphokinase [Bacillus cereus IS075]
 gi|401095836|gb|EJQ03889.1| GTP pyrophosphokinase [Bacillus cereus AND1407]
 gi|401189469|gb|EJQ96519.1| GTP pyrophosphokinase [Bacillus cereus ISP3191]
 gi|401203557|gb|EJR10394.1| GTP pyrophosphokinase [Bacillus cereus MSX-A12]
 gi|401212483|gb|EJR19226.1| GTP pyrophosphokinase [Bacillus cereus MSX-D12]
 gi|401245619|gb|EJR51972.1| GTP pyrophosphokinase [Bacillus cereus VD102]
          Length = 727

 Score =  351 bits (900), Expect = 8e-94,   Method: Compositional matrix adjust.
 Identities = 204/496 (41%), Positives = 291/496 (58%), Gaps = 50/496 (10%)

Query: 134 LRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIA 193
           L     YL   ++ELV RA   A +AH  Q R+SGEP+IIHP++VA IL +L +D  +++
Sbjct: 13  LEKASQYLVDEDIELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDPATVS 72

Query: 194 AGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDL 253
           AG LHD VEDT + T E IE EF   +  +V+G   V+KLGK+K K+  H  Q  +A++ 
Sbjct: 73  AGFLHDVVEDTEI-TLEDIEREFNKEIAMLVDG---VTKLGKIKYKS--HEQQ--QAENH 124

Query: 254 RQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIK 313
           R+MF+AM +++RVI++KLADRLHNMRTL H+P  KQ  IA ETL++FAPLA  LG+  IK
Sbjct: 125 RKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGISTIK 184

Query: 314 SELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEI 373
            ELE+ S  Y N + Y     R+ +L K    E EE    +M  I +   LD + ++ EI
Sbjct: 185 WELEDTSLRYLNPQQYY----RIVNLMKRKRAEREEYLDEVMTGIREK--LDEVAIQPEI 238

Query: 374 RSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVH 433
               K  YSIY+ +       NE+  +  +R+++            +  + CY VLG++H
Sbjct: 239 SGRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVV------------NSIKDCYAVLGIIH 286

Query: 434 GIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAH 493
             W P+P   KDYIA PK N YQSLHTT+I    +    LEVQIRT+EM  IAE GIAAH
Sbjct: 287 TCWKPMPGRFKDYIAMPKANLYQSLHTTVIGPKGDP---LEVQIRTKEMHEIAEFGIAAH 343

Query: 494 YSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFV 553
           ++ +                  GKT       +  +++W   I EWQ E      + EF+
Sbjct: 344 WAYK-----------------EGKT-AETTGTLEKKLTWFRQILEWQNE---ASNAEEFM 382

Query: 554 DTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHV 613
           +++  DL    VFVFTP+G++  LP G+  +D+AY +H+EIGNK + AKVNG +V+  + 
Sbjct: 383 ESLKIDLFSDMVFVFTPKGDVMELPLGSVPIDFAYRVHSEIGNKTIGAKVNGKMVTLDYK 442

Query: 614 LANAEVVEIITYNVSF 629
           L   +++EI+T   S+
Sbjct: 443 LKTGDIIEILTSKHSY 458


>gi|228993146|ref|ZP_04153068.1| GTP pyrophosphokinase [Bacillus pseudomycoides DSM 12442]
 gi|228999195|ref|ZP_04158776.1| GTP pyrophosphokinase [Bacillus mycoides Rock3-17]
 gi|229006742|ref|ZP_04164376.1| GTP pyrophosphokinase [Bacillus mycoides Rock1-4]
 gi|228754603|gb|EEM04014.1| GTP pyrophosphokinase [Bacillus mycoides Rock1-4]
 gi|228760540|gb|EEM09505.1| GTP pyrophosphokinase [Bacillus mycoides Rock3-17]
 gi|228766605|gb|EEM15246.1| GTP pyrophosphokinase [Bacillus pseudomycoides DSM 12442]
          Length = 728

 Score =  351 bits (900), Expect = 8e-94,   Method: Compositional matrix adjust.
 Identities = 203/496 (40%), Positives = 291/496 (58%), Gaps = 50/496 (10%)

Query: 134 LRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIA 193
           L     YL+ +++ELV RA   A +AH  Q R+SGEP+IIHP++VA IL +L +D  +++
Sbjct: 13  LEKASQYLADDDIELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDPSTVS 72

Query: 194 AGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDL 253
           AG LHD VEDT V T E IE EF   +  +V+G   V+KLGK+K K+  H  Q  +A++ 
Sbjct: 73  AGFLHDVVEDTEV-TLEDIEREFNKEIAMLVDG---VTKLGKIKYKS--HEQQ--QAENH 124

Query: 254 RQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIK 313
           R+MF+AM +++RVI++KLADRLHNMRTL H+P  KQ  IA ETL++FAPLA  LG+  IK
Sbjct: 125 RKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGINTIK 184

Query: 314 SELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEI 373
            ELE+ S  Y N + Y     R+ +L K    E EE    +M  I D   L  + ++ +I
Sbjct: 185 WELEDTSLRYLNPQQYY----RIVNLMKRKRAEREEYLDEVMTGIRDK--LKEVAIQPDI 238

Query: 374 RSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVH 433
               K  YSIY+ +       NE+  +  +R+++            +  + CY VLG++H
Sbjct: 239 SGRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVV------------NSIKDCYAVLGIIH 286

Query: 434 GIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAH 493
             W P+P   KDYIA PK N YQSLHTT+I    +    LEVQIRT+EM  IAE GIAAH
Sbjct: 287 TCWKPMPGRFKDYIAMPKANLYQSLHTTVIGPKGDP---LEVQIRTKEMHEIAEYGIAAH 343

Query: 494 YSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFV 553
           ++   +  G    A                  +  +++W   I EWQ E      + EF+
Sbjct: 344 WA---YKEGKAAEA---------------TGTLEKKLTWFRQILEWQNE---ASNAEEFM 382

Query: 554 DTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHV 613
           +++  DL    VFVFTP+G++  LP G+  +D+AY +H+EIGNK + AKVNG +V+  + 
Sbjct: 383 ESLKIDLFSDMVFVFTPKGDVMELPLGSVPIDFAYRVHSEIGNKTIGAKVNGKMVTLDYK 442

Query: 614 LANAEVVEIITYNVSF 629
           L   +++EI+T   S+
Sbjct: 443 LKTGDIIEILTSKHSY 458


>gi|366164520|ref|ZP_09464275.1| (p)ppGpp synthetase I SpoT/RelA [Acetivibrio cellulolyticus CD2]
          Length = 725

 Score =  351 bits (900), Expect = 8e-94,   Method: Compositional matrix adjust.
 Identities = 201/493 (40%), Positives = 301/493 (61%), Gaps = 64/493 (12%)

Query: 138 ISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           IS  +PN +  L+ +A +++ EAHDGQ+R SGEPFI+HP+EVA IL ELELD  +I AG+
Sbjct: 12  ISKYNPNCDFTLLEKAYLISREAHDGQQRVSGEPFIMHPMEVANILAELELDCTAIVAGI 71

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHDT+EDT   T+E+++++FG  V  +V+G   V+KLGK+    +    ++ +A++LR+M
Sbjct: 72  LHDTIEDT-TYTYEQLKDKFGEEVALLVDG---VTKLGKIPYTTK----EEQQAENLRKM 123

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
           FLAM++++RVI++KLADRLHNMRTL +M P KQ   A ETL+++APLA  LG+ +IK EL
Sbjct: 124 FLAMSKDIRVILIKLADRLHNMRTLKYMAPEKQIEKAKETLEIYAPLAHRLGISKIKWEL 183

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+L   Y + + Y  +  ++A   +E E  +E+    L ++I +      + ++  +   
Sbjct: 184 EDLCLRYLDPKGYYDLVDKIAKKRREREAYIEQIVLTLKERIAE------LGIEVRLDGR 237

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSIY+ + +   +++++  +   RII+            S  + CY VLGLVH I+
Sbjct: 238 PKHFYSIYRKMEQQTKTLDQIYDLFAFRIIV------------SSVKDCYAVLGLVHEIY 285

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMDLIAERGIA 491
            P+P   KDYIA PKPN YQSLHTT+I     PF        E+QIRT +M  +AE GIA
Sbjct: 286 KPMPGRFKDYIAMPKPNMYQSLHTTVIGPEGVPF--------EIQIRTWDMHRVAEVGIA 337

Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
           AH+    +  G  G +  N                  +++WL  + +WQ+E        E
Sbjct: 338 AHWK---YKEGSKGDSDDN------------------KLAWLRQLLDWQKEM---RDPNE 373

Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
           F++T+  DL    VFVFTP+G++ +L   +T +D+AY IH+ IGNKMV AKVNG +V   
Sbjct: 374 FMETLKVDLFTDEVFVFTPKGDVFSLAASSTPIDFAYSIHSAIGNKMVGAKVNGKIVPIE 433

Query: 612 HVLANAEVVEIIT 624
           + L N ++VEI+T
Sbjct: 434 YELKNGDIVEILT 446


>gi|257090255|ref|ZP_05584616.1| RelA/SpoT family protein [Enterococcus faecalis CH188]
 gi|312902753|ref|ZP_07761957.1| GTP diphosphokinase [Enterococcus faecalis TX0635]
 gi|422690313|ref|ZP_16748370.1| GTP diphosphokinase [Enterococcus faecalis TX0630]
 gi|422702134|ref|ZP_16759974.1| GTP diphosphokinase [Enterococcus faecalis TX1342]
 gi|256999067|gb|EEU85587.1| RelA/SpoT family protein [Enterococcus faecalis CH188]
 gi|310633807|gb|EFQ17090.1| GTP diphosphokinase [Enterococcus faecalis TX0635]
 gi|315169383|gb|EFU13400.1| GTP diphosphokinase [Enterococcus faecalis TX1342]
 gi|315576684|gb|EFU88875.1| GTP diphosphokinase [Enterococcus faecalis TX0630]
          Length = 737

 Score =  350 bits (899), Expect = 9e-94,   Method: Compositional matrix adjust.
 Identities = 197/492 (40%), Positives = 288/492 (58%), Gaps = 49/492 (9%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           +Y+ P  +ELV++AL  A +AH+GQ R+SGEP+IIHP++VA IL EL +D  ++A G LH
Sbjct: 18  TYMGPEHVELVQKALTYAEKAHEGQVRQSGEPYIIHPIQVAGILAELHMDPHTVATGFLH 77

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT+V T + ++EEFG  +  +V+G   V+KLGK+K K+    +    A++ R+M L
Sbjct: 78  DVVEDTDV-TLDDLKEEFGEDIAMLVDG---VTKLGKIKYKSHEEQL----AENHRKMLL 129

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM +++RVI+VKLADRLHNMRTL H+   KQ  IA ETL+++APLA  LG+ +IK ELE+
Sbjct: 130 AMAQDLRVIMVKLADRLHNMRTLKHLREDKQRRIAQETLEIYAPLAHRLGISRIKWELED 189

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
            +  Y N   Y ++   +     E E  + EA + +    ED      + +  EI    K
Sbjct: 190 TALRYINPNQYYRIVNLMQSKRDEREAYVAEAVEDIRLATED------LEIYAEIYGRPK 243

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIY+ +   +   NE+  +  +R+I+               + CY VLG +H  WTP
Sbjct: 244 HIYSIYRKMKDQKKQFNEIYDLLAIRVIV------------DSIKDCYAVLGAIHTRWTP 291

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PK N YQS+HTT+I         +EVQIRT EM  IAE G+AAH++ + 
Sbjct: 292 MPGRFKDYIAMPKANMYQSIHTTVIG---PKGNPVEVQIRTHEMHQIAEFGVAAHWAYK- 347

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                            GK   +    +  ++ W + I E Q+E   +  + EF+  +  
Sbjct: 348 ----------------EGKAEKIETDELTKQVDWFHEIIELQDE---SYDASEFMQGVKE 388

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           D+   +V+VFTP G++  LPKG+  +D+AY IHTEIGNK   AKVNG +V   +VL N +
Sbjct: 389 DIFSDKVYVFTPSGDVTELPKGSGPLDFAYSIHTEIGNKTTGAKVNGKMVQLDYVLKNGD 448

Query: 619 VVEIITYNVSFS 630
           ++E++T   SF 
Sbjct: 449 IIEVLTSPNSFG 460


>gi|256961538|ref|ZP_05565709.1| RelA/SpoT protein [Enterococcus faecalis Merz96]
 gi|293384703|ref|ZP_06630558.1| GTP diphosphokinase [Enterococcus faecalis R712]
 gi|293387403|ref|ZP_06631958.1| GTP diphosphokinase [Enterococcus faecalis S613]
 gi|312908311|ref|ZP_07767275.1| GTP diphosphokinase [Enterococcus faecalis DAPTO 512]
 gi|312910615|ref|ZP_07769457.1| GTP diphosphokinase [Enterococcus faecalis DAPTO 516]
 gi|256952034|gb|EEU68666.1| RelA/SpoT protein [Enterococcus faecalis Merz96]
 gi|291078010|gb|EFE15374.1| GTP diphosphokinase [Enterococcus faecalis R712]
 gi|291083194|gb|EFE20157.1| GTP diphosphokinase [Enterococcus faecalis S613]
 gi|310625725|gb|EFQ09008.1| GTP diphosphokinase [Enterococcus faecalis DAPTO 512]
 gi|311289163|gb|EFQ67719.1| GTP diphosphokinase [Enterococcus faecalis DAPTO 516]
          Length = 737

 Score =  350 bits (899), Expect = 9e-94,   Method: Compositional matrix adjust.
 Identities = 197/492 (40%), Positives = 288/492 (58%), Gaps = 49/492 (9%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           +Y+ P  +ELV++AL  A +AH+GQ R+SGEP+IIHP++VA IL EL +D  ++A G LH
Sbjct: 18  TYMGPEHVELVQKALTYAEKAHEGQVRQSGEPYIIHPIQVAGILAELHMDPHTVATGFLH 77

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT+V T + ++EEFG  +  +V+G   V+KLGK+K K+    +    A++ R+M L
Sbjct: 78  DVVEDTDV-TLDDLKEEFGEDIAMLVDG---VTKLGKIKYKSHEEQL----AENHRKMLL 129

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM +++RVI+VKLADRLHNMRTL H+   KQ  IA ETL+++APLA  LG+ +IK ELE+
Sbjct: 130 AMAQDLRVIMVKLADRLHNMRTLKHLREDKQRRIAQETLEIYAPLAHRLGISRIKWELED 189

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
            +  Y N   Y ++   +     E E  + EA + +    ED      + +  EI    K
Sbjct: 190 TALRYINPNQYYRIVNLMQSKRDEREAYVAEAVEDIRLATED------LEIYAEIYGRPK 243

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIY+ +   +   NE+  +  +R+I+               + CY VLG +H  WTP
Sbjct: 244 HIYSIYRKMKDQKKQFNEIYDLLAIRVIV------------DSIKDCYAVLGAIHTRWTP 291

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PK N YQS+HTT+I         +EVQIRT EM  IAE G+AAH++ + 
Sbjct: 292 MPGRFKDYIAMPKANMYQSIHTTVIG---PKGNPVEVQIRTHEMHQIAEFGVAAHWAYK- 347

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                            GK   +    +  ++ W + I E Q+E   +  + EF+  +  
Sbjct: 348 ----------------EGKAEKIETDELTKQVDWFHEIIELQDE---SYDASEFMQGVKE 388

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           D+   +V+VFTP G++  LPKG+  +D+AY IHTEIGNK   AKVNG +V   +VL N +
Sbjct: 389 DIFSDKVYVFTPSGDVTELPKGSGPLDFAYSIHTEIGNKTTGAKVNGKMVQLDYVLKNGD 448

Query: 619 VVEIITYNVSFS 630
           ++E++T   SF 
Sbjct: 449 IIEVLTSPNSFG 460


>gi|257416410|ref|ZP_05593404.1| RelA/SpoT protein [Enterococcus faecalis ARO1/DG]
 gi|422695354|ref|ZP_16753342.1| GTP diphosphokinase [Enterococcus faecalis TX4244]
 gi|257158238|gb|EEU88198.1| RelA/SpoT protein [Enterococcus faecalis ARO1/DG]
 gi|315147637|gb|EFT91653.1| GTP diphosphokinase [Enterococcus faecalis TX4244]
          Length = 737

 Score =  350 bits (899), Expect = 9e-94,   Method: Compositional matrix adjust.
 Identities = 197/492 (40%), Positives = 288/492 (58%), Gaps = 49/492 (9%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           +Y+ P  +ELV++AL  A +AH+GQ R+SGEP+IIHP++VA IL EL +D  ++A G LH
Sbjct: 18  TYMGPEHVELVQKALTYAEKAHEGQVRQSGEPYIIHPIQVAGILAELHMDPHTVATGFLH 77

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT+V T + ++EEFG  +  +V+G   V+KLGK+K K+    +    A++ R+M L
Sbjct: 78  DVVEDTDV-TLDDLKEEFGEDIAMLVDG---VTKLGKIKYKSHEEQL----AENHRKMLL 129

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM +++RVI+VKLADRLHNMRTL H+   KQ  IA ETL+++APLA  LG+ +IK ELE+
Sbjct: 130 AMAQDLRVIMVKLADRLHNMRTLKHLREDKQRRIAQETLEIYAPLAHRLGISRIKWELED 189

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
            +  Y N   Y ++   +     E E  + EA + +    ED      + +  EI    K
Sbjct: 190 TALRYINPNQYYRIVNLMQSKRDEREAYVAEAVEDIRLATED------LEIYAEIYGRPK 243

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIY+ +   +   NE+  +  +R+I+               + CY VLG +H  WTP
Sbjct: 244 HIYSIYRKMKDQKKQFNEIYDLLAIRVIV------------DSIKDCYAVLGAIHTRWTP 291

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PK N YQS+HTT+I         +EVQIRT EM  IAE G+AAH++ + 
Sbjct: 292 MPGRFKDYIAMPKANMYQSIHTTVIG---PKGNPVEVQIRTHEMHQIAEFGVAAHWAYK- 347

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                            GK   +    +  ++ W + I E Q+E   +  + EF+  +  
Sbjct: 348 ----------------EGKAEKIETDELTKQVDWFHEIIELQDE---SYDASEFMQGVKE 388

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           D+   +V+VFTP G++  LPKG+  +D+AY IHTEIGNK   AKVNG +V   +VL N +
Sbjct: 389 DIFSDKVYVFTPSGDVTELPKGSGPLDFAYSIHTEIGNKTTGAKVNGKMVQLDYVLKNGD 448

Query: 619 VVEIITYNVSFS 630
           ++E++T   SF 
Sbjct: 449 IIEVLTSPNSFG 460


>gi|415885635|ref|ZP_11547563.1| GTP diphosphokinase [Bacillus methanolicus MGA3]
 gi|387591304|gb|EIJ83623.1| GTP diphosphokinase [Bacillus methanolicus MGA3]
          Length = 731

 Score =  350 bits (899), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 200/493 (40%), Positives = 299/493 (60%), Gaps = 50/493 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YL+   + LV++A   A  AH  Q R+SGEP+IIHP++VA IL +LE+D  ++AAG 
Sbjct: 16  TRKYLNEEHVNLVKKAYEFARAAHSDQYRKSGEPYIIHPIQVAGILADLEMDPITVAAGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD +EDT+V T E + E F   V  +V+G   V+KLGK+K K    S ++ +A++ R+M
Sbjct: 76  LHDVIEDTDV-TLEEMREAFNDEVAMLVDG---VTKLGKIKYK----SHEEQQAENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
           F+AM +++RVI++KLADRLHNMRTL H+P  KQ  I+ ETL++FAPLA  LG+ +IK EL
Sbjct: 128 FVAMAQDIRVILIKLADRLHNMRTLKHLPLEKQRRISNETLEIFAPLAHRLGISKIKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+ +  Y N + Y     R+ +L K+   E E+    +++++ +   L+ +++K EI   
Sbjct: 188 EDTALRYLNPQQYY----RIVNLMKKKRAEREQYLDDVIEEVRNR--LNEVSIKAEISGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSIY+ +       NE+  +  +RI++            +  + CY VLG++H  W
Sbjct: 242 PKHIYSIYRKMALQNKQFNEIYDLLAVRIVV------------NSIKDCYAVLGIIHTCW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA PKPN YQSLHTT+I    +    LEVQIRT EM  IAE GIAAH++ 
Sbjct: 290 KPMPGRFKDYIAMPKPNMYQSLHTTVIGPKGDP---LEVQIRTFEMHRIAEYGIAAHWAY 346

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +                  GK+V   N++   +++W   I E+Q +      + EF++++
Sbjct: 347 K-----------------EGKSVN-ENSSFEEKLTWFREILEFQND---TANAEEFMESL 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             DL    VFVFTP+G++  LP G+  +D+AY IH+EIGNK + AKVNG +V+  + L  
Sbjct: 386 KIDLFSDMVFVFTPKGDVIELPAGSVPIDFAYRIHSEIGNKTIGAKVNGKMVTLDYKLQT 445

Query: 617 AEVVEIITYNVSF 629
            ++VEI+T   S+
Sbjct: 446 GDIVEILTSKHSY 458


>gi|402313175|ref|ZP_10832096.1| putative GTP diphosphokinase [Lachnospiraceae bacterium ICM7]
 gi|400366935|gb|EJP19955.1| putative GTP diphosphokinase [Lachnospiraceae bacterium ICM7]
          Length = 761

 Score =  350 bits (899), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 202/502 (40%), Positives = 302/502 (60%), Gaps = 51/502 (10%)

Query: 126 SPERLWEDLRPTISYLSP-NELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
           SPE L++ L   I +  P +++ ++ +A  LA +AH+ QKR+SGEP+IIHP+ VA IL E
Sbjct: 25  SPESLYKKLVDIILHYHPSDDITMISKAYELAKKAHNDQKRKSGEPYIIHPICVAIILAE 84

Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
           LELD E+IAAGLLHD +EDT  ++FE + + FG  V  +V+G   V+KL +L  KN+   
Sbjct: 85  LELDKETIAAGLLHDVIEDT-AISFEELSDIFGVDVANLVDG---VTKLTQLSLKNDKIE 140

Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
           +Q   A++LR+MFLAM +++RVI++KLADRLHNMRTL +M P KQ   A ET+ +++P+A
Sbjct: 141 MQ---AENLRKMFLAMAKDIRVILIKLADRLHNMRTLQYMKPEKQKEKARETMDIYSPIA 197

Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
           + LG+ +IK EL++LS  Y + + Y  +  ++A   ++ ++ ++E    ++KK   ++ L
Sbjct: 198 QRLGISKIKVELDDLSLKYLHPDVYYDLSEKLAFRKEQRQQFVDE----IIKKF--NEHL 251

Query: 365 DLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
               +K +I    K  +SIYK ++    +++++  +  +RII++                
Sbjct: 252 SDTGMKYQISGRVKHLFSIYKKMVNQNKTLDQIYDVFAIRIIVEDVAA------------ 299

Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDL 484
           CY  LG  H I+ PIP   KDYIA PKPN YQSLHTTLI    ++    EVQIRT EM  
Sbjct: 300 CYLALGTAHEIYKPIPGRFKDYIAMPKPNMYQSLHTTLIS---DTGQPFEVQIRTFEMHK 356

Query: 485 IAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFV 544
            AE GIAAH+  +   +G       +                  +++WL  I EWQ++  
Sbjct: 357 TAEFGIAAHWKYKESGSGTSAQGSEDA-----------------KMNWLRQILEWQKDTS 399

Query: 545 GNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAK 602
            N    EF+  I    DL    V+ FTP G++KNLP G+  +D+AY IH+ +GNKMV A+
Sbjct: 400 DNA---EFLKVIKSDLDLFSDSVYCFTPNGDVKNLPAGSNPIDFAYSIHSAVGNKMVGAR 456

Query: 603 VNGNLVSPTHVLANAEVVEIIT 624
           VNG LV+  + L + + VEIIT
Sbjct: 457 VNGRLVNIDYELKSGDRVEIIT 478


>gi|429766249|ref|ZP_19298523.1| GTP diphosphokinase [Clostridium celatum DSM 1785]
 gi|429185229|gb|EKY26218.1| GTP diphosphokinase [Clostridium celatum DSM 1785]
          Length = 727

 Score =  350 bits (899), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 201/484 (41%), Positives = 285/484 (58%), Gaps = 49/484 (10%)

Query: 145 ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDT 204
           +L +V++A  LAFEAH  QKR SGEP+IIHP+EVA IL EL +D  +I AGLLHD +EDT
Sbjct: 17  DLNIVKKAYNLAFEAHKEQKRESGEPYIIHPIEVATILAELGMDTSTIVAGLLHDVIEDT 76

Query: 205 NVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEV 264
           +  T+E I+  F   +  +V G TK++K+       E  S ++ +AD+ R+M LAM  ++
Sbjct: 77  DY-TYEDIKNIFSEEIANLVSGVTKITKM-------EYKSKEEQQADNFRKMLLAMANDI 128

Query: 265 RVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYT 324
           RVII+KLADRLHNMRTL +M   KQ   A ETL ++APLA  LG+ ++K ELE+L F Y 
Sbjct: 129 RVIIIKLADRLHNMRTLKYMSKEKQKKTAKETLDIYAPLAHRLGISKVKWELEDLCFRYL 188

Query: 325 NAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIY 384
           + E+Y  + +++A+   E E  + +  K L +K      LD   + ++I    K  YSIY
Sbjct: 189 HEEEYYDLVKQIAEKRVERETYIAKTIKDLYEK------LDEAGIDSDIDGRPKHFYSIY 242

Query: 385 KAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMK 444
           + ++    SI ++  +  +RI            L +  + CY VLG+VH I+ PIP   K
Sbjct: 243 RKMVTKNKSIEQIFDLTAIRI------------LVNSVKDCYEVLGVVHTIYKPIPGRFK 290

Query: 445 DYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLV 504
           DYIA PKPN YQSLHTT+I    ++    E+QIRT EM   AE GIAAH+  +       
Sbjct: 291 DYIAMPKPNMYQSLHTTVIGPQGKT---FEIQIRTFEMHKTAEYGIAAHWKYK------- 340

Query: 505 GHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSR 564
                 G S   K     N     ++ WL  + EWQ+E      + EF++    +L    
Sbjct: 341 -----EGDSGDNKEKSFEN-----KLVWLRDMLEWQKE---TSDAEEFMEGFKINLFTDE 387

Query: 565 VFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
           +F+FTP+G + +LP GAT +D+AY IHT++GNK V AKVNG +V   + L   ++VEI+T
Sbjct: 388 IFLFTPKGVVIDLPNGATPIDFAYRIHTDVGNKCVGAKVNGKIVPLDYKLKTGQIVEILT 447

Query: 625 YNVS 628
            N S
Sbjct: 448 SNNS 451


>gi|389571985|ref|ZP_10162073.1| GTP diphosphokinase [Bacillus sp. M 2-6]
 gi|388428471|gb|EIL86268.1| GTP diphosphokinase [Bacillus sp. M 2-6]
          Length = 736

 Score =  350 bits (898), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 202/490 (41%), Positives = 289/490 (58%), Gaps = 47/490 (9%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           YLS   ++ + RA   A  AH  Q R+SGEP+IIHP++VA IL +LE+D  +IA G LHD
Sbjct: 19  YLSAEHIQFIERAYEYAENAHKEQYRKSGEPYIIHPIQVAGILVDLEMDPSTIAGGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            VEDT+V T E ++E F   V  +V+G   V+KLGK+K K    S ++ +A++ R+MF+A
Sbjct: 79  VVEDTDV-TLEDLKEHFNEEVAMLVDG---VTKLGKIKYK----SQEEQQAENHRKMFVA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M +++RVI++KLADRLHNMRTL H+P  KQ  I+ ETL++FAPLA  LG+ +IK ELE+ 
Sbjct: 131 MAQDIRVILIKLADRLHNMRTLKHLPQEKQRRISNETLEIFAPLAHRLGISKIKWELEDT 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           +  Y N + Y     R+ +L K    E EE    ++ +++D   +  + +K E     K 
Sbjct: 191 ALRYLNPQQYY----RIVNLMKRKRAEREEYLDEVVNEVKDR--VSEVNIKAEFSGRPKH 244

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIY+ ++      NE+  +  +RI            L    + CY VLG++H  W P+
Sbjct: 245 IYSIYRKMVMQNKQFNEIYDLLAVRI------------LVDSIKDCYAVLGIIHTCWKPM 292

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PKPN YQSLHTT+I    +    LEVQIRT EM  IAE GIAAH+     
Sbjct: 293 PGRFKDYIAMPKPNMYQSLHTTVIGPKGDP---LEVQIRTVEMHEIAEYGIAAHW----- 344

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
                  A   G+     T     A    ++SW   I E+Q E   +  + EF++++  D
Sbjct: 345 -------AYKEGKESAEST---EEAVFQKKLSWFREILEFQNE---STDAEEFMESLKID 391

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           L    VFVFTP+G++  LP G+  +D++Y IH+EIGNK + AKVNG +V+  H L   ++
Sbjct: 392 LFSDMVFVFTPKGDVIELPSGSVPIDFSYRIHSEIGNKTIGAKVNGKMVTLDHKLKTGDI 451

Query: 620 VEIITYNVSF 629
           +EI+T   S+
Sbjct: 452 IEILTSKHSY 461


>gi|428201543|ref|YP_007080132.1| RelA/SpoT family (p)ppGpp synthetase [Pleurocapsa sp. PCC 7327]
 gi|427978975|gb|AFY76575.1| (p)ppGpp synthetase, RelA/SpoT family [Pleurocapsa sp. PCC 7327]
          Length = 765

 Score =  350 bits (898), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 209/480 (43%), Positives = 282/480 (58%), Gaps = 47/480 (9%)

Query: 145 ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDT 204
           EL L+ RA   A+E H+GQ R+SGEP+I HP+ VA +L +L  D   IAAG LHD VEDT
Sbjct: 45  ELSLICRAFNFAYELHEGQYRKSGEPYIAHPIAVASLLRDLGGDKAMIAAGFLHDVVEDT 104

Query: 205 NVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEV 264
           +V T E IEE FGA VR++VEG TK+SK      K E       +A++ R+MFLAM +++
Sbjct: 105 DV-TLEEIEERFGAEVRQLVEGVTKLSKFN-FSSKTER------QAENFRRMFLAMAKDI 156

Query: 265 RVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYT 324
           RVIIVKLADRLHNMRTL H+ P KQ SIA ET ++FAPLA  LG+ ++K ELE+L+F Y 
Sbjct: 157 RVIIVKLADRLHNMRTLEHLKPEKQRSIALETREIFAPLANRLGIGRLKWELEDLAFKYL 216

Query: 325 NAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIY 384
             E Y  V+  VA+   + E  LE+ +++L +++       L     EI+   K  Y IY
Sbjct: 217 EPEAYRAVQSLVAEKRTDREARLEKVSEMLRERL-----TSLGINVREIKGRPKHLYGIY 271

Query: 385 KAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMK 444
           + + + +   +E+  IA LRII+  K              CY  L +VH  + PIP   K
Sbjct: 272 QKMQRQQKEFHEIYDIAALRIIVDSK------------DECYRALAVVHDAFRPIPGRFK 319

Query: 445 DYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLV 504
           DYI  PKPN YQSLHTT++      M   EVQIRT EM  IAE GIAAH+          
Sbjct: 320 DYIGLPKPNRYQSLHTTVVGLNGRPM---EVQIRTLEMHHIAEYGIAAHWK--------- 367

Query: 505 GHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSR 564
            +    G S    T  L+  +   + +WL  + EWQ +      ++E+VD +  +L    
Sbjct: 368 -YKETGGSS----TAQLSQED--EKFTWLRQLLEWQNDL---KDAQEYVDNLKDNLFEDD 417

Query: 565 VFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
           V+VFTP+G++  L +GAT VD+AY IHTEIG+ M  A++NG        L N ++VEIIT
Sbjct: 418 VYVFTPKGDVVALAQGATPVDFAYHIHTEIGHHMKGARINGRWSVLDTPLQNGDIVEIIT 477


>gi|47529935|ref|YP_021284.1| GTP pyrophosphokinase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49187297|ref|YP_030549.1| GTP pyrophosphokinase [Bacillus anthracis str. Sterne]
 gi|65321773|ref|ZP_00394732.1| COG0317: Guanosine polyphosphate pyrophosphohydrolases/synthetases
           [Bacillus anthracis str. A2012]
 gi|165871974|ref|ZP_02216615.1| GTP diphosphokinase [Bacillus anthracis str. A0488]
 gi|167636486|ref|ZP_02394783.1| GTP diphosphokinase [Bacillus anthracis str. A0442]
 gi|167640729|ref|ZP_02398989.1| GTP diphosphokinase [Bacillus anthracis str. A0193]
 gi|170688669|ref|ZP_02879874.1| GTP diphosphokinase [Bacillus anthracis str. A0465]
 gi|170709262|ref|ZP_02899682.1| GTP diphosphokinase [Bacillus anthracis str. A0389]
 gi|177653959|ref|ZP_02936000.1| GTP diphosphokinase [Bacillus anthracis str. A0174]
 gi|190567043|ref|ZP_03019959.1| GTP diphosphokinase [Bacillus anthracis str. Tsiankovskii-I]
 gi|227817185|ref|YP_002817194.1| GTP diphosphokinase [Bacillus anthracis str. CDC 684]
 gi|229602848|ref|YP_002868693.1| GTP diphosphokinase [Bacillus anthracis str. A0248]
 gi|254684162|ref|ZP_05148022.1| GTP diphosphokinase [Bacillus anthracis str. CNEVA-9066]
 gi|254736509|ref|ZP_05194215.1| GTP diphosphokinase [Bacillus anthracis str. Western North America
           USA6153]
 gi|254741547|ref|ZP_05199234.1| GTP diphosphokinase [Bacillus anthracis str. Kruger B]
 gi|254751354|ref|ZP_05203391.1| GTP diphosphokinase [Bacillus anthracis str. Vollum]
 gi|254757686|ref|ZP_05209713.1| GTP diphosphokinase [Bacillus anthracis str. Australia 94]
 gi|386738296|ref|YP_006211477.1| GTP pyrophosphokinase [Bacillus anthracis str. H9401]
 gi|421506659|ref|ZP_15953582.1| GTP pyrophosphokinase [Bacillus anthracis str. UR-1]
 gi|421638475|ref|ZP_16079071.1| GTP pyrophosphokinase [Bacillus anthracis str. BF1]
 gi|47505083|gb|AAT33759.1| GTP diphosphokinase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49181224|gb|AAT56600.1| GTP pyrophosphokinase [Bacillus anthracis str. Sterne]
 gi|164712264|gb|EDR17800.1| GTP diphosphokinase [Bacillus anthracis str. A0488]
 gi|167511301|gb|EDR86687.1| GTP diphosphokinase [Bacillus anthracis str. A0193]
 gi|167528079|gb|EDR90876.1| GTP diphosphokinase [Bacillus anthracis str. A0442]
 gi|170125838|gb|EDS94745.1| GTP diphosphokinase [Bacillus anthracis str. A0389]
 gi|170667355|gb|EDT18113.1| GTP diphosphokinase [Bacillus anthracis str. A0465]
 gi|172081014|gb|EDT66092.1| GTP diphosphokinase [Bacillus anthracis str. A0174]
 gi|190562034|gb|EDV16003.1| GTP diphosphokinase [Bacillus anthracis str. Tsiankovskii-I]
 gi|227006997|gb|ACP16740.1| GTP diphosphokinase [Bacillus anthracis str. CDC 684]
 gi|229267256|gb|ACQ48893.1| GTP diphosphokinase [Bacillus anthracis str. A0248]
 gi|384388148|gb|AFH85809.1| GTP pyrophosphokinase [Bacillus anthracis str. H9401]
 gi|401823652|gb|EJT22799.1| GTP pyrophosphokinase [Bacillus anthracis str. UR-1]
 gi|403394901|gb|EJY92141.1| GTP pyrophosphokinase [Bacillus anthracis str. BF1]
          Length = 727

 Score =  350 bits (898), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 203/496 (40%), Positives = 291/496 (58%), Gaps = 50/496 (10%)

Query: 134 LRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIA 193
           L     YL   ++ELV RA   A +AH  Q R+SGEP+IIHP++VA +L +L +D  +++
Sbjct: 13  LEKASQYLVDEDIELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGVLVDLHMDPATVS 72

Query: 194 AGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDL 253
           AG LHD VEDT + T E IE EF   +  +V+G   V+KLGK+K K+  H  Q  +A++ 
Sbjct: 73  AGFLHDVVEDTEI-TLEDIEREFNKEIAMLVDG---VTKLGKIKYKS--HEQQ--QAENH 124

Query: 254 RQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIK 313
           R+MF+AM +++RVI++KLADRLHNMRTL H+P  KQ  IA ETL++FAPLA  LG+  IK
Sbjct: 125 RKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGISTIK 184

Query: 314 SELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEI 373
            ELE+ S  Y N + Y     R+ +L K    E EE    +M  I +   LD + ++ EI
Sbjct: 185 WELEDTSLRYLNPQQYY----RIVNLMKRKRAEREEYLDEVMTGIREK--LDEVAIQPEI 238

Query: 374 RSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVH 433
               K  YSIY+ +       NE+  +  +R+++            +  + CY VLG++H
Sbjct: 239 SGRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVV------------NSIKDCYAVLGIIH 286

Query: 434 GIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAH 493
             W P+P   KDYIA PK N YQSLHTT+I    +    LEVQIRT+EM  IAE GIAAH
Sbjct: 287 TCWKPMPGRFKDYIAMPKANLYQSLHTTVIGPKGDP---LEVQIRTKEMHEIAEFGIAAH 343

Query: 494 YSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFV 553
           ++ +                  GKT       +  +++W   I EWQ E      + EF+
Sbjct: 344 WAYK-----------------EGKT-AETTGTLEKKLTWFRQILEWQNE---ASNAEEFM 382

Query: 554 DTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHV 613
           +++  DL    VFVFTP+G++  LP G+  +D+AY +H+EIGNK + AKVNG +V+  + 
Sbjct: 383 ESLKIDLFSDMVFVFTPKGDVMELPLGSVPIDFAYRVHSEIGNKTIGAKVNGKMVTLDYK 442

Query: 614 LANAEVVEIITYNVSF 629
           L   +++EI+T   S+
Sbjct: 443 LKTGDIIEILTSKHSY 458


>gi|311031524|ref|ZP_07709614.1| GTP pyrophosphokinase [Bacillus sp. m3-13]
          Length = 732

 Score =  350 bits (898), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 199/490 (40%), Positives = 291/490 (59%), Gaps = 50/490 (10%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           YL   ++  + RA   A  AH  Q R+SGEP+IIHP++VA IL +L+LD  +IAAG LHD
Sbjct: 19  YLKGEDIAFLERAYEFAKNAHAEQYRKSGEPYIIHPIQVAGILVDLDLDPSTIAAGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            VEDT+V T E I+E F A V  +V+G   V+KLGK+K K    S ++ +A++ R+MF+A
Sbjct: 79  VVEDTSV-TLEEIKEAFNAEVAMLVDG---VTKLGKIKYK----SQEEQQAENHRKMFVA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M +++RVI++KLADRLHNMRTL H+P  KQ  I+ ETL++FAPLA  LG+ +IK ELE+ 
Sbjct: 131 MAQDIRVILIKLADRLHNMRTLKHLPQEKQRRISNETLEIFAPLAHRLGISKIKWELEDT 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           +  Y N + Y     R+ +L K    E EE    +M ++ D   L+ + +  E+    K 
Sbjct: 191 ALRYLNPQQYY----RIVNLMKRKRAEREEYISEVMNEVNDR--LEEVEITAELSGRPKH 244

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIY+ + K     +E+  +  +RII+            +  + CY VLG++H  W P+
Sbjct: 245 IYSIYRKMAKQNKQFSEIYDLLAVRIIV------------NSIKDCYAVLGIIHTCWKPM 292

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PKPN YQSLHTT+I    +    LEVQIRT +M  IAE GIAAH++    
Sbjct: 293 PGRFKDYIAMPKPNMYQSLHTTVIGPKGDP---LEVQIRTSDMHQIAEYGIAAHWA---- 345

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
                          +      + A+   +++W   I EWQ +      + EF++++  D
Sbjct: 346 --------------YKEDKEADDRASFEEKLTWFREILEWQNDATN---AEEFMESLKID 388

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           L    VFVFTP+G++  LP G+  +D++Y IH+EIGNK + AKVNG +V+  + L   ++
Sbjct: 389 LFSDMVFVFTPKGDVIELPSGSVPIDFSYRIHSEIGNKTIGAKVNGKMVTLDYKLKTGDI 448

Query: 620 VEIITYNVSF 629
           +EI+T   S+
Sbjct: 449 IEILTSKHSY 458


>gi|28211806|ref|NP_782750.1| GTP pyrophosphokinase [Clostridium tetani E88]
 gi|28204248|gb|AAO36687.1| putative GTP pyrophosphokinase [Clostridium tetani E88]
          Length = 731

 Score =  350 bits (898), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 204/488 (41%), Positives = 285/488 (58%), Gaps = 62/488 (12%)

Query: 142 SPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTV 201
           S  E+ELV++A  +A  AH  QKR SGEP+I+HPVEVA IL ++ +D ++I AGLLHD +
Sbjct: 14  SNEEIELVKKAYEIANGAHKQQKRESGEPYIVHPVEVACILADMGMDADTIVAGLLHDVI 73

Query: 202 EDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMT 261
           EDT   T+E +E EF   V  +VEG   V+KLGK+K K    S ++ +AD++R+M LAM 
Sbjct: 74  EDTEY-TYEDVEREFNKQVADLVEG---VTKLGKIKYK----SKEEQQADNVRKMLLAMA 125

Query: 262 EEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSF 321
           ++VRVI++KLADRLHNMRTL +MP  KQ   A ET  ++APLA  LG+ +IK ELE+L+F
Sbjct: 126 QDVRVILIKLADRLHNMRTLKYMPVEKQKEKAKETFDIYAPLAHRLGISKIKWELEDLAF 185

Query: 322 MYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPY 381
            Y N  +Y    + +A      E+ +E    I +   E  + L+   +K++I    K  Y
Sbjct: 186 RYINPNEYYSFVKEIA------ERRVERIAYIELIVNELTKSLEGSGIKSDIEGRPKHFY 239

Query: 382 SIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPR 441
           SIY+ ++    +++++  +  +RI            L    + CY  LG+VH ++ PIP 
Sbjct: 240 SIYRKMINKNKTLDQIFDLTAIRI------------LVDTVKDCYAALGIVHTMYKPIPG 287

Query: 442 AMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
             KDYIA PKPN YQSLH+T+I     PF        E+QIRT EM   AE GIAAH+  
Sbjct: 288 RFKDYIAMPKPNMYQSLHSTVIGPQGKPF--------EIQIRTFEMHKTAEYGIAAHWKY 339

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  +T                       N+ L+++WL  I EWQ E      + EF++  
Sbjct: 340 KEGIT--------------------EENNMELKLTWLREILEWQRE---TSDATEFMEGF 376

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             DL    VFVFTP+G + NLP  +T +D+AY IHT+IGNK V AKVN  +V   + L  
Sbjct: 377 KIDLFSDEVFVFTPKGSVINLPSKSTPIDFAYKIHTDIGNKCVGAKVNNRMVPLDYNLKT 436

Query: 617 AEVVEIIT 624
            E+VEIIT
Sbjct: 437 GEIVEIIT 444


>gi|392960862|ref|ZP_10326327.1| RelA/SpoT family protein [Pelosinus fermentans DSM 17108]
 gi|421054380|ref|ZP_15517348.1| RelA/SpoT family protein [Pelosinus fermentans B4]
 gi|421059720|ref|ZP_15522283.1| RelA/SpoT family protein [Pelosinus fermentans B3]
 gi|421068769|ref|ZP_15530010.1| RelA/SpoT family protein [Pelosinus fermentans A12]
 gi|421071241|ref|ZP_15532361.1| (p)ppGpp synthetase I, SpoT/RelA [Pelosinus fermentans A11]
 gi|392439135|gb|EIW16869.1| RelA/SpoT family protein [Pelosinus fermentans A12]
 gi|392440738|gb|EIW18398.1| RelA/SpoT family protein [Pelosinus fermentans B4]
 gi|392447157|gb|EIW24411.1| (p)ppGpp synthetase I, SpoT/RelA [Pelosinus fermentans A11]
 gi|392454759|gb|EIW31581.1| RelA/SpoT family protein [Pelosinus fermentans DSM 17108]
 gi|392458415|gb|EIW34950.1| RelA/SpoT family protein [Pelosinus fermentans B3]
          Length = 736

 Score =  350 bits (898), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 194/500 (38%), Positives = 294/500 (58%), Gaps = 51/500 (10%)

Query: 125 DSPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
           D    + E ++   SY     + +V++A  LA +AH GQ R SGE +I HP+ VA+IL E
Sbjct: 4   DGQNTIKEIIKKIQSYQIDAPIAIVQQAYELAVDAHKGQTRASGEEYICHPLGVAKILSE 63

Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
           L++D  +I+A LLHD VEDT   + E +E+ FG  V  +V+G TK+S++       E  S
Sbjct: 64  LQIDALTISASLLHDVVEDT-AFSLEELEKLFGKEVAMLVDGVTKLSRI-------EYKS 115

Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
            ++ + ++ R+MFLAM +++RV+++KLADRLHNMRTL HMP HKQ  I+ ET ++FAPLA
Sbjct: 116 KEEQQLENFRKMFLAMAKDIRVVLIKLADRLHNMRTLKHMPEHKQRRISQETHEIFAPLA 175

Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
             LG+  +K ELE+L+F Y   E Y ++  +V    +E E+ + EA KIL  +++D    
Sbjct: 176 HRLGISSVKWELEDLAFRYLEPEKYYELVEKVKQKRREREQLINEAIKILSARLDD---- 231

Query: 365 DLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
             + +K +I+   K  YSIYK +LK    ++E+  ++ +RI            L    + 
Sbjct: 232 --VEIKADIQGRPKHFYSIYKKMLKGNKDLSEIYDLSAVRI------------LVDTVKD 277

Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDL 484
           CY  LG+VH +W P+P   KDYIA PK N YQSLHTT+I    +    LE+QIRT +M  
Sbjct: 278 CYGALGVVHTLWKPLPLRFKDYIAMPKSNMYQSLHTTVISTEGQP---LEIQIRTMDMHR 334

Query: 485 IAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFV 544
            +E GIAAH+  +    G                    N +   +++WL  + EWQ++  
Sbjct: 335 TSEYGIAAHWRYKEGSKGA-------------------NKDFDEKLTWLRQLSEWQQDL- 374

Query: 545 GNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVN 604
                 EF++T+  D+    VFVFTP+G++ +LP G+T +D+AY IHT +GN+ V A++N
Sbjct: 375 --RDPHEFMETVKMDIFSDEVFVFTPKGDVIDLPAGSTPIDFAYRIHTGVGNRCVGARIN 432

Query: 605 GNLVSPTHVLANAEVVEIIT 624
           G ++     L N ++VEI+T
Sbjct: 433 GKMIPLETKLTNGDIVEIVT 452


>gi|404482346|ref|ZP_11017573.1| RelA/SpoT family protein [Clostridiales bacterium OBRC5-5]
 gi|404344507|gb|EJZ70864.1| RelA/SpoT family protein [Clostridiales bacterium OBRC5-5]
          Length = 761

 Score =  350 bits (897), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 202/502 (40%), Positives = 301/502 (59%), Gaps = 51/502 (10%)

Query: 126 SPERLWEDLRPTISYLSP-NELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
           SPE L++ L   I +  P +++ ++ +A  LA +AH+ QKR+SGEP+IIHP+ VA IL E
Sbjct: 25  SPESLYKKLVDIILHYHPSDDITMISKAYELAKKAHNDQKRKSGEPYIIHPICVAIILAE 84

Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
           LELD E+IAAGLLHD +EDT  ++FE +   FG  V  +V+G   V+KL +L  KN+   
Sbjct: 85  LELDKETIAAGLLHDVIEDT-AISFEELSNIFGVDVANLVDG---VTKLTQLSLKNDKIE 140

Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
           +Q   A++LR+MFLAM +++RVI++KLADRLHNMRTL +M P KQ   A ET+ +++P+A
Sbjct: 141 MQ---AENLRKMFLAMAKDIRVILIKLADRLHNMRTLQYMKPEKQKEKARETMDIYSPIA 197

Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
           + LG+ +IK EL++LS  Y + + Y  +  ++A   ++ ++ ++E    ++KK   ++ L
Sbjct: 198 QRLGISKIKVELDDLSLKYLHPDVYYDLSEKLAFRKEQRQQFVDE----IIKKF--NEHL 251

Query: 365 DLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
               +K +I    K  +SIYK ++    +++++  +  +RII++                
Sbjct: 252 SDTGMKYQISGRVKHLFSIYKKMVNQNKTLDQIYDVFAIRIIVEDVAA------------ 299

Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDL 484
           CY  LG  H I+ PIP   KDYIA PKPN YQSLHTTLI    ++    EVQIRT EM  
Sbjct: 300 CYLALGTAHEIYKPIPGRFKDYIAMPKPNMYQSLHTTLIS---DTGQPFEVQIRTFEMHK 356

Query: 485 IAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFV 544
            AE GIAAH+  +   +G       +                  +++WL  I EWQ++  
Sbjct: 357 TAEFGIAAHWKYKESGSGTSAQGSEDA-----------------KMNWLRQILEWQKDTS 399

Query: 545 GNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAK 602
            N    EF+  I    DL    V+ FTP G++KNLP G+  +D+AY IH+ +GNKMV A+
Sbjct: 400 DNA---EFLKVIKSDLDLFSDSVYCFTPNGDVKNLPAGSNPIDFAYSIHSAVGNKMVGAR 456

Query: 603 VNGNLVSPTHVLANAEVVEIIT 624
           VNG LV+  + L + + VEIIT
Sbjct: 457 VNGRLVNIDYELKSGDRVEIIT 478


>gi|390559275|ref|ZP_10243626.1| GTP pyrophosphokinase [Nitrolancetus hollandicus Lb]
 gi|390174152|emb|CCF82919.1| GTP pyrophosphokinase [Nitrolancetus hollandicus Lb]
          Length = 721

 Score =  350 bits (897), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 198/483 (40%), Positives = 297/483 (61%), Gaps = 51/483 (10%)

Query: 145 ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDT 204
           ++ +V++A   A +AH+G+ RRSGEP+I HPVEVA IL E++LD E++AA LLHD VEDT
Sbjct: 13  DISVVKQAHDFARDAHEGKFRRSGEPYISHPVEVAIILAEMQLDQETLAAALLHDVVEDT 72

Query: 205 NVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNE-NHSV--QDVKADDLRQMFLAMT 261
           +  T E +   FG  + R+V+G   V+KLG+++   E +H+V  ++ +A+ LR+MFLAM 
Sbjct: 73  DT-TMEDLRTLFGDRIVRLVDG---VTKLGRIRWAAETDHAVREKERQAESLRKMFLAMV 128

Query: 262 EEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSF 321
           ++VRV+++KLADRLHNMRTL HMP  KQ   A ET++++APLA  LG++QIKSELE+L+ 
Sbjct: 129 DDVRVVLIKLADRLHNMRTLEHMPRAKQLRSAKETMEIYAPLANRLGIWQIKSELEDLAL 188

Query: 322 MYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPY 381
            Y + + Y  ++R +     + ++ LE     L + +ED        +  EI    K   
Sbjct: 189 RYVDPQTYFTIERALERRGTDRDQYLESVIAELSRTLED------AGIGAEISGREKHIT 242

Query: 382 SIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPR 441
           SI + + +   S +E+  +  +R+I+  K            + CY  LG++H IW PIP 
Sbjct: 243 SIARKMERKERSFDEIYDVLGIRVIVDEK------------KDCYGALGVIHSIWHPIPG 290

Query: 442 AMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVT 501
              DY+ATPK + YQS+HT +   L  +   LE+QIRT EM  IAE GIAAH+  +    
Sbjct: 291 EFDDYVATPKESMYQSIHTVV---LGPNGHPLEIQIRTHEMHYIAEYGIAAHWRYK---- 343

Query: 502 GLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLL 561
                    G  P        +AN+  +I+WL  + +W++E V    ++EFV+++  D+ 
Sbjct: 344 --------EGSRP--------DANVEAKIAWLRQVMDWRDEVV---DAQEFVESLKSDVF 384

Query: 562 GSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVE 621
              ++VFTPRG+I  LP GAT VD+AY IHTE+G++ V AKVN +LV   + L N +VV+
Sbjct: 385 QEMIYVFTPRGDIIELPAGATPVDFAYRIHTEVGHQCVGAKVNNHLVPLNYKLQNGQVVQ 444

Query: 622 IIT 624
           I+T
Sbjct: 445 IMT 447


>gi|340357216|ref|ZP_08679839.1| GTP diphosphokinase [Sporosarcina newyorkensis 2681]
 gi|339618078|gb|EGQ22679.1| GTP diphosphokinase [Sporosarcina newyorkensis 2681]
          Length = 732

 Score =  350 bits (897), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 193/490 (39%), Positives = 302/490 (61%), Gaps = 49/490 (10%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++   ++ +++A ++A  AH+GQ R SGEP+I HP++VA IL EL++D E++AAG LHD
Sbjct: 19  YMNEEHVDFIKKAFVVAKAAHEGQFRSSGEPYINHPIQVAGILAELQMDPETVAAGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            VEDT V + E I  EFG  V  +V+G   V+KL KLK K    S ++ +A++ R+MF+A
Sbjct: 79  VVEDTEV-SREDIIREFGDEVAMLVDG---VTKLDKLKFK----SNEEKQAENHRKMFIA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M +++RVI++KLADRLHNMRTL H+P  KQ  ++ ETL++F+PLA  LG+  IK ELE++
Sbjct: 131 MAQDIRVILIKLADRLHNMRTLKHVPAAKQRRVSEETLEIFSPLAHRLGISTIKWELEDI 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           +  Y+N + Y     R+ +L K+   E E+  + +M+++  +  LD M + +E+    K 
Sbjct: 191 ALRYSNPQQYY----RIVNLMKQKRVEREKYLQDVMEQMRVE--LDNMGIASEMHGRPKH 244

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIY+ ++  +   NE+  +  +RI++K              + CY  LG++H +W P+
Sbjct: 245 LYSIYQKMVIQKKEFNEIYDLLAVRIVVKSI------------KDCYAALGIIHTLWKPM 292

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK N YQSLHTT++    +    LEVQIRTEEM  I+E G+AAH++ +  
Sbjct: 293 PGRFKDYIAMPKQNLYQSLHTTVVGPAGDP---LEVQIRTEEMHRISEFGVAAHWAYK-- 347

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
                           GK+V  ++ +I  +++W   I E Q E   +  ++EF++++  D
Sbjct: 348 ---------------EGKSVAKSSNDIDSKLTWFREILEIQNE---SSNAQEFMESLKFD 389

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           L    V+VFTP G++  LP+G+  +D+AY +H+E+GN+   AKVNG +V     L   ++
Sbjct: 390 LFSDMVYVFTPNGDVVELPQGSVPIDFAYRVHSEVGNRTTGAKVNGKIVPLDSSLETGDI 449

Query: 620 VEIITYNVSF 629
           VEI+T   SF
Sbjct: 450 VEILTSKQSF 459


>gi|423612609|ref|ZP_17588470.1| GTP pyrophosphokinase [Bacillus cereus VD107]
 gi|401245334|gb|EJR51690.1| GTP pyrophosphokinase [Bacillus cereus VD107]
          Length = 727

 Score =  350 bits (897), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 203/496 (40%), Positives = 291/496 (58%), Gaps = 50/496 (10%)

Query: 134 LRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIA 193
           L     YL+  ++ELV RA   A +AH  Q R+SGEP+IIHP++VA IL +L +D  +++
Sbjct: 13  LEKASQYLADEDIELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDPSTVS 72

Query: 194 AGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDL 253
           AG LHD VEDT + T E IE EF   +  +V+G   V+KLGK+K K+  H  Q  +A++ 
Sbjct: 73  AGFLHDVVEDTEI-TLEDIEREFNKEIAMLVDG---VTKLGKIKYKS--HEQQ--QAENH 124

Query: 254 RQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIK 313
           R+MF+AM +++RVI++KLADRLHNMRTL H+P  KQ  IA ETL++FAPLA  LG+  IK
Sbjct: 125 RKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGISTIK 184

Query: 314 SELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEI 373
            ELE+ S  Y N + Y     R+ +L K    E EE    +M  I +   L  + ++ EI
Sbjct: 185 WELEDTSLRYLNPQQYY----RIVNLMKRKRAEREEYLDEVMTGIREK--LKEVAIQPEI 238

Query: 374 RSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVH 433
               K  YSIY+ +       NE+  +  +R+++            +  + CY VLG++H
Sbjct: 239 SGRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVV------------NSIKDCYAVLGIIH 286

Query: 434 GIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAH 493
             W P+P   KDYIA PK N YQSLHTT+I    +    LEVQIRT+EM  IAE GIAAH
Sbjct: 287 TCWKPMPGRFKDYIAMPKANLYQSLHTTVIGPKGDP---LEVQIRTKEMHEIAEFGIAAH 343

Query: 494 YSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFV 553
           ++ +                  GKT       +  +++W   I EWQ E      + EF+
Sbjct: 344 WAYK-----------------EGKT-AETTGTLEKKLTWFRQILEWQNE---ASNAEEFM 382

Query: 554 DTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHV 613
           +++  DL    VFVFTP+G++  LP G+  +D+AY +H+EIGNK + AKVNG +V+  + 
Sbjct: 383 ESLKIDLFSDMVFVFTPKGDVMELPLGSVPIDFAYRVHSEIGNKTIGAKVNGKMVTLDYK 442

Query: 614 LANAEVVEIITYNVSF 629
           L   +++EI+T   S+
Sbjct: 443 LKTGDIIEILTSKHSY 458


>gi|331002004|ref|ZP_08325524.1| hypothetical protein HMPREF0491_00386 [Lachnospiraceae oral taxon
           107 str. F0167]
 gi|330411800|gb|EGG91205.1| hypothetical protein HMPREF0491_00386 [Lachnospiraceae oral taxon
           107 str. F0167]
          Length = 762

 Score =  350 bits (897), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 204/502 (40%), Positives = 305/502 (60%), Gaps = 51/502 (10%)

Query: 126 SPERLWEDLRPTISYLSP-NELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
           SPE L++ L   I +  P +++ ++ +A  LA  AH+ Q+R+SGEP+IIHP+ VA IL E
Sbjct: 25  SPESLYKKLVNIILHYHPSDDISMITKAYELAKTAHNDQRRKSGEPYIIHPICVAIILAE 84

Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
           LELD E+IAAGLLHD +EDT  ++FE + + FG  V  +V+G   V+KL +L  KN+   
Sbjct: 85  LELDKETIAAGLLHDVIEDT-AISFEELSDMFGVDVANLVDG---VTKLTQLSLKNDKIE 140

Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
           +Q   A++LR+MFLAM +++RVI++KLADRLHNMRTL +M P KQ   A ET+ +++P+A
Sbjct: 141 MQ---AENLRKMFLAMAKDIRVILIKLADRLHNMRTLQYMKPEKQKEKARETMDIYSPIA 197

Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
           + LG+ +IK EL++LS  Y + + Y  +  ++A   ++ ++ ++E    ++KKI  ++ L
Sbjct: 198 QRLGISKIKVELDDLSLKYLHPDVYYDLSEKLAFRKEQRQQFVDE----IIKKI--NEHL 251

Query: 365 DLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
            +  +K +I    K  +SIYK ++    +++++  +  +RII++                
Sbjct: 252 SVTGIKYQINGRVKHLFSIYKKMVNQNKTLDQIYDVFAIRIIVEDVAA------------ 299

Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDL 484
           CY  LG VH I+ PIP   KDYIA PK N YQSLHTTLI    ++    EVQIRT EM  
Sbjct: 300 CYLALGTVHEIYKPIPGRFKDYIAMPKQNMYQSLHTTLIS---DTGQPFEVQIRTYEMHK 356

Query: 485 IAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFV 544
            AE GIAAH+  +   TG    A+ +  +               +++WL  I EWQ++  
Sbjct: 357 TAEFGIAAHWKYK--ETGSSSEAQGSEDA---------------KMNWLRQILEWQKDTS 399

Query: 545 GNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAK 602
            N    EF+  I    DL    V+ FTP G++KNLP G+  +D+AY IH+ +GNKMV A+
Sbjct: 400 DNA---EFLKVIKSDLDLFSDSVYCFTPNGDVKNLPAGSNPIDFAYSIHSAVGNKMVGAR 456

Query: 603 VNGNLVSPTHVLANAEVVEIIT 624
           VNG LV+    L + + VEIIT
Sbjct: 457 VNGRLVNIDFELTSGDRVEIIT 478


>gi|421074132|ref|ZP_15535173.1| RelA/SpoT family protein [Pelosinus fermentans JBW45]
 gi|392527799|gb|EIW50884.1| RelA/SpoT family protein [Pelosinus fermentans JBW45]
          Length = 736

 Score =  349 bits (896), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 193/493 (39%), Positives = 292/493 (59%), Gaps = 51/493 (10%)

Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
           E ++   SY     + +V++A  LA +AH GQ R SGE +I HP+ VA+IL EL++D  +
Sbjct: 11  EIIKKIQSYQIDAPIAIVQQAYELAVDAHKGQTRASGEEYICHPLGVAKILAELQIDALT 70

Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
           I+A LLHD VEDT   + E +E+ FG  V  +V+G TK+S++       E  S ++ + +
Sbjct: 71  ISASLLHDVVEDT-AFSLEELEKLFGKEVAMLVDGVTKLSRI-------EYKSKEEQQLE 122

Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
           + R+MFLAM +++RV+++KLADRLHNMRTL HMP HKQ  I+ ET ++FAPLA  LG+  
Sbjct: 123 NFRKMFLAMAKDIRVVLIKLADRLHNMRTLKHMPEHKQRRISQETHEIFAPLAHRLGISS 182

Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
           +K ELE+L+F Y   E Y ++  +V    +E E+ + EA KIL  +++D      + +K 
Sbjct: 183 VKWELEDLAFRYLEPEKYYELVEKVKQKRREREQLINEAIKILSTRLDD------VEIKA 236

Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
           +I+   K  YSIYK +LK    ++E+  ++ +RI            L    + CY  LG+
Sbjct: 237 DIQGRPKHFYSIYKKMLKGNKDLSEIYDLSAVRI------------LVDTVKDCYGALGV 284

Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
           VH +W P+P   KDYIA PK N YQSLHTT+I    +    LE+QIRT +M   +E GIA
Sbjct: 285 VHTLWKPLPLRFKDYIAMPKSNMYQSLHTTVISTEGQP---LEIQIRTMDMHRTSEYGIA 341

Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
           AH+  +    G                    N +   +++WL  + EWQ++        E
Sbjct: 342 AHWRYKEGSKGA-------------------NKDFDEKLTWLRQLSEWQQDL---RDPHE 379

Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
           F++T+  D+    VFVFTP+G++ +LP G+T +D+AY IHT +GN+ V A++NG ++   
Sbjct: 380 FMETVKMDIFSDEVFVFTPKGDVIDLPAGSTPIDFAYRIHTGVGNRCVGARINGKMIPLE 439

Query: 612 HVLANAEVVEIIT 624
             L N ++VEI+T
Sbjct: 440 TKLTNGDIVEIVT 452


>gi|147668657|ref|YP_001213475.1| (p)ppGpp synthetase I SpoT/RelA [Dehalococcoides sp. BAV1]
 gi|146269605|gb|ABQ16597.1| (p)ppGpp synthetase I, SpoT/RelA [Dehalococcoides sp. BAV1]
          Length = 728

 Score =  349 bits (896), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 203/502 (40%), Positives = 294/502 (58%), Gaps = 57/502 (11%)

Query: 133 DLRPTIS-YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
           DL+   S YL P +L L+  A   A  AH GQ R+SGEPFI HP+ VA  L +L+LD  +
Sbjct: 5   DLKEKASKYLPPEKLTLLEEAYNYAAAAHAGQMRKSGEPFIEHPLNVAMTLADLQLDAAT 64

Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLG------KLKCKNENHSV 245
           ++A LLHD  ED N+ + E+I+++FGA V ++V+G TK+SKL         +    N S+
Sbjct: 65  LSAALLHDVPEDANI-SLEQIDKKFGADVAKLVDGVTKLSKLALGPAIEDARRPGGNASL 123

Query: 246 QDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAK 305
           +  +A++LR+M +AM E++RV+ +KLADR HNMRTL  + P K+ SIA ET++++APLA 
Sbjct: 124 R--QAENLRKMLVAMAEDLRVVFIKLADRFHNMRTLQALSPEKRRSIAKETMEIYAPLAH 181

Query: 306 LLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLD 365
            LG++++K +LE+L+F Y +   Y +V   V     + +  LE  + IL  + E +    
Sbjct: 182 RLGIWELKWQLEDLAFRYLDPRHYRQVANLVDSKLAQRQNYLEHVSAILQGEFEKN---- 237

Query: 366 LMTVKTEIRSVCKEPYSIYKAVLK--SRG-SINEVNQIAQLRIIIKPKPCSGVGPLCSPQ 422
              +  E+    K  YSIY+ + K  S+G    ++  +  LR+++   P           
Sbjct: 238 --GLNVEVSGRPKHLYSIYQKMEKYASQGKQFEDIYDVLALRVLVNDIPD---------- 285

Query: 423 QICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEM 482
             CYH +G+VH +W PIP A  DYIA PKPNGYQSLHT ++         LEVQ+RT +M
Sbjct: 286 --CYHAVGIVHSLWHPIPGAFDDYIANPKPNGYQSLHTAVMSL---GTTPLEVQVRTYQM 340

Query: 483 DLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEE 542
             IAE G+AAH+                    R KT    + N   RI WL  + EW  +
Sbjct: 341 HHIAEYGVAAHW--------------------RYKTAGKEDVNFEDRIGWLRQLIEWHRD 380

Query: 543 FVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAK 602
             G   + EF++++  D+   +VFVFTP+GEIK+L KGAT +D+AY IHTE+GN+ + AK
Sbjct: 381 MRG---AEEFLESVKTDIFNDQVFVFTPKGEIKDLAKGATPIDFAYRIHTELGNRCIGAK 437

Query: 603 VNGNLVSPTHVLANAEVVEIIT 624
            NG LV   + L N EVVEI+T
Sbjct: 438 ANGRLVPLDYQLKNGEVVEIVT 459


>gi|73747961|ref|YP_307200.1| GTP pyrophosphokinase [Dehalococcoides sp. CBDB1]
 gi|289431960|ref|YP_003461833.1| (p)ppGpp synthetase I SpoT/RelA [Dehalococcoides sp. GT]
 gi|452204331|ref|YP_007484460.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Dehalococcoides
           mccartyi BTF08]
 gi|73659677|emb|CAI82284.1| GTP pyrophosphokinase [Dehalococcoides sp. CBDB1]
 gi|288945680|gb|ADC73377.1| (p)ppGpp synthetase I, SpoT/RelA [Dehalococcoides sp. GT]
 gi|452111387|gb|AGG07118.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Dehalococcoides
           mccartyi BTF08]
          Length = 728

 Score =  349 bits (896), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 203/502 (40%), Positives = 294/502 (58%), Gaps = 57/502 (11%)

Query: 133 DLRPTIS-YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
           DL+   S YL P +L L+  A   A  AH GQ R+SGEPFI HP+ VA  L +L+LD  +
Sbjct: 5   DLKEKASKYLPPEKLTLLEEAYNYAAAAHAGQMRKSGEPFIEHPLNVAMTLADLQLDAAT 64

Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLG------KLKCKNENHSV 245
           ++A LLHD  ED N+ + E+I+++FGA V ++V+G TK+SKL         +    N S+
Sbjct: 65  LSAALLHDVPEDANI-SLEQIDKKFGADVAKLVDGVTKLSKLALGPAIEDARRPGGNASL 123

Query: 246 QDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAK 305
           +  +A++LR+M +AM E++RV+ +KLADR HNMRTL  + P K+ SIA ET++++APLA 
Sbjct: 124 R--QAENLRKMLVAMAEDLRVVFIKLADRFHNMRTLQALSPEKRRSIAKETMEIYAPLAH 181

Query: 306 LLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLD 365
            LG++++K +LE+L+F Y +   Y +V   V     + +  LE  + IL  + E +    
Sbjct: 182 RLGIWELKWQLEDLAFRYLDPRHYRQVANLVDSKLAQRQNYLEHVSAILQGEFEKN---- 237

Query: 366 LMTVKTEIRSVCKEPYSIYKAVLK--SRG-SINEVNQIAQLRIIIKPKPCSGVGPLCSPQ 422
              +  E+    K  YSIY+ + K  S+G    ++  +  LR+++   P           
Sbjct: 238 --GLNVEVSGRPKHLYSIYQKMEKYASQGKQFEDIYDVLALRVLVNDIPD---------- 285

Query: 423 QICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEM 482
             CYH +G+VH +W PIP A  DYIA PKPNGYQSLHT ++         LEVQ+RT +M
Sbjct: 286 --CYHAVGIVHSLWHPIPGAFDDYIANPKPNGYQSLHTAVMSL---GTTPLEVQVRTYQM 340

Query: 483 DLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEE 542
             IAE G+AAH+                    R KT    + N   RI WL  + EW  +
Sbjct: 341 HHIAEYGVAAHW--------------------RYKTAGKEDVNFEDRIGWLRQLIEWHRD 380

Query: 543 FVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAK 602
             G   + EF++++  D+   +VFVFTP+GEIK+L KGAT +D+AY IHTE+GN+ + AK
Sbjct: 381 MRG---AEEFLESVKTDIFNDQVFVFTPKGEIKDLAKGATPIDFAYRIHTELGNRCIGAK 437

Query: 603 VNGNLVSPTHVLANAEVVEIIT 624
            NG LV   + L N EVVEI+T
Sbjct: 438 ANGRLVPLDYQLKNGEVVEIVT 459


>gi|57233675|ref|YP_180760.1| GTP pyrophosphokinase [Dehalococcoides ethenogenes 195]
 gi|57224123|gb|AAW39180.1| GTP pyrophosphokinase [Dehalococcoides ethenogenes 195]
          Length = 728

 Score =  349 bits (896), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 201/500 (40%), Positives = 292/500 (58%), Gaps = 53/500 (10%)

Query: 133 DLRPTIS-YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
           DL+   S YL P +L  +  A   A  AH GQ R+SGEPFI HP+ VA  L +L+LD  +
Sbjct: 5   DLKEKASKYLPPEKLVFLEEAYNYAAAAHTGQMRKSGEPFIEHPLNVAITLADLQLDSAT 64

Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKL----GKLKCKNENHSVQD 247
           +AA LLHD  ED ++ + E+IE++FGA V ++V+G TK+SKL    G    +    +   
Sbjct: 65  LAAALLHDVPEDAHI-SLEQIEKKFGADVAKLVDGVTKLSKLALGPGIEDARRPGGNASL 123

Query: 248 VKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLL 307
            +A++LR+M +AM+E++RV+ +KLADR HNMRTL  +   K+ SIA ET++++APLA  L
Sbjct: 124 RQAENLRKMLVAMSEDLRVVFIKLADRFHNMRTLQALSAEKRRSIAKETMEIYAPLAHRL 183

Query: 308 GMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLM 367
           G++++K +LE+L+F Y +   Y +V   V     + +  +E  + IL  + E +      
Sbjct: 184 GIWELKWQLEDLAFRYLDPRHYRQVANLVDSKLAQRKNYIEHVSAILQSEFEKN------ 237

Query: 368 TVKTEIRSVCKEPYSIYKAVLK--SRG-SINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
            +K E+    K  YSIY+ + K  S+G    ++  +  LR+++   P             
Sbjct: 238 GLKVELSGRPKHLYSIYQKMEKYASQGKQFEDIYDVLALRVLVNDIPD------------ 285

Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDL 484
           CYH +G+VH +W PIP A  DYIA PKPNGYQSLHT ++         LEVQ+RT +M  
Sbjct: 286 CYHAIGIVHSLWHPIPGAFDDYIANPKPNGYQSLHTAVMSL---GTTPLEVQVRTYQMHH 342

Query: 485 IAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFV 544
           IAE G+AAH+                    R KT    + N   RI WL  + EW  +  
Sbjct: 343 IAEYGVAAHW--------------------RYKTAGKEDVNFEDRIGWLRQLIEWHRDMR 382

Query: 545 GNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVN 604
           G   + EF++++  D+   +VFVFTP+GEIK+L KGAT +D+AY IHTE+GN+ + AK N
Sbjct: 383 G---AEEFLESVKTDIFNDQVFVFTPKGEIKDLAKGATPIDFAYRIHTELGNRCIGAKAN 439

Query: 605 GNLVSPTHVLANAEVVEIIT 624
           G LV   + L N EVVEI+T
Sbjct: 440 GRLVPLDYQLKNGEVVEIVT 459


>gi|336424063|ref|ZP_08604110.1| hypothetical protein HMPREF0994_00116 [Lachnospiraceae bacterium
           3_1_57FAA_CT1]
 gi|336012840|gb|EGN42733.1| hypothetical protein HMPREF0994_00116 [Lachnospiraceae bacterium
           3_1_57FAA_CT1]
          Length = 809

 Score =  349 bits (896), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 199/511 (38%), Positives = 304/511 (59%), Gaps = 59/511 (11%)

Query: 126 SPERLWEDLRPTISYLSP-NELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
           SPE L++DL   +    P +++ ++ +A  +A+ AH+GQ R+SGEP+IIHP+ VA IL +
Sbjct: 62  SPEELYQDLISRVRRYHPSDDISMIEKAYKIAYAAHEGQVRKSGEPYIIHPLCVAIILAD 121

Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLG----KLKCKN 240
           LELD E+I AGLLHD VEDT ++T   IE+EFG  V  +V+G TK+ ++     K   +N
Sbjct: 122 LELDKETIEAGLLHDVVEDT-IMTEAEIEKEFGPDVALLVDGVTKLQQIDFPSDKGNGEN 180

Query: 241 ENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVF 300
           +    Q+++A++LR+MFLAM +++RVI++KLADRLHNMRTL + PP KQ  IA ET++++
Sbjct: 181 KTADQQEMQAENLRKMFLAMAKDIRVIMIKLADRLHNMRTLKYQPPAKQQKIARETMEIY 240

Query: 301 APLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIED 360
           AP+A+ LG+ +IK EL++LS  Y   E Y  +  ++A    E E+ +++         E 
Sbjct: 241 APIAQRLGISKIKVELDDLSLKYLEPEVYYDLVDKIAVRRSEREEYIQQIVD------EV 294

Query: 361 DQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCS 420
            + +    +K++I    K  +SIYK +     +++++  +  +RII+             
Sbjct: 295 SEHMKNAGIKSQIDGRVKHFFSIYKKMKNQSKTLDQIYDLFAVRIIV------------D 342

Query: 421 PQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEV 475
             + CY  LG++H ++ PIP   KDYIA PK N YQSLHTT+I     PF        E+
Sbjct: 343 SVKDCYAALGVIHEMYKPIPGRFKDYIAMPKANMYQSLHTTVIGSSGQPF--------EI 394

Query: 476 QIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNA 535
           QIRT EM   AE GIAAH+  +               +  GK V    A    +++WL  
Sbjct: 395 QIRTMEMHKAAEFGIAAHWKYK--------------EASDGKKVA---AQEEEKLAWLRQ 437

Query: 536 IREWQEEFVGNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTE 593
           I EWQ +   N   +EF++ +    DL    V+ FTP G++K LP G+T +D+AY +HT 
Sbjct: 438 ILEWQRDMSDN---KEFMNLLKSDLDLFSDTVYCFTPTGDVKTLPAGSTPIDFAYSVHTA 494

Query: 594 IGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
           +GNKM+ A+VNG LV+  + + N + +EI+T
Sbjct: 495 VGNKMIGARVNGKLVTIDYEIQNGDRIEILT 525


>gi|423395299|ref|ZP_17372500.1| GTP pyrophosphokinase [Bacillus cereus BAG2X1-1]
 gi|423406174|ref|ZP_17383323.1| GTP pyrophosphokinase [Bacillus cereus BAG2X1-3]
 gi|401654710|gb|EJS72249.1| GTP pyrophosphokinase [Bacillus cereus BAG2X1-1]
 gi|401660168|gb|EJS77650.1| GTP pyrophosphokinase [Bacillus cereus BAG2X1-3]
          Length = 727

 Score =  349 bits (896), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 203/496 (40%), Positives = 291/496 (58%), Gaps = 50/496 (10%)

Query: 134 LRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIA 193
           L     YL+  ++ELV RA   A +AH  Q R+SGEP+IIHP++VA IL +L +D  +++
Sbjct: 13  LEKASQYLADEDIELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDPATVS 72

Query: 194 AGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDL 253
           AG LHD VEDT + T E IE EF   +  +V+G   V+KLGK+K K+  H  Q  +A++ 
Sbjct: 73  AGFLHDVVEDTEI-TLEDIEREFNKEIAMLVDG---VTKLGKIKYKS--HEQQ--QAENH 124

Query: 254 RQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIK 313
           R+MF+AM +++RVI++KLADRLHNMRTL H+P  KQ  IA ETL++FAPLA  LG+  IK
Sbjct: 125 RKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGISTIK 184

Query: 314 SELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEI 373
            ELE+ S  Y N + Y     R+ +L K    E EE    +M  I +   L  + ++ EI
Sbjct: 185 WELEDTSLRYLNPQQYY----RIVNLMKRKRAEREEYLDEVMTGIREK--LKEVAIQPEI 238

Query: 374 RSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVH 433
               K  YSIY+ +       NE+  +  +R+++            +  + CY VLG++H
Sbjct: 239 SGRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVV------------NSIKDCYAVLGIIH 286

Query: 434 GIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAH 493
             W P+P   KDYIA PK N YQSLHTT+I    +    LEVQIRT+EM  IAE GIAAH
Sbjct: 287 TCWKPMPGRFKDYIAMPKANLYQSLHTTVIGPKGDP---LEVQIRTKEMHEIAEFGIAAH 343

Query: 494 YSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFV 553
           ++ +                  GKT       +  +++W   I EWQ E      + EF+
Sbjct: 344 WAYK-----------------EGKT-AETTGTLEKKLTWFRQILEWQNE---ASNAEEFM 382

Query: 554 DTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHV 613
           +++  DL    VFVFTP+G++  LP G+  +D+AY +H+EIGNK + AKVNG +V+  + 
Sbjct: 383 ESLKIDLFSDMVFVFTPKGDVMELPLGSVPIDFAYRVHSEIGNKTIGAKVNGKMVTLDYK 442

Query: 614 LANAEVVEIITYNVSF 629
           L   +++EI+T   S+
Sbjct: 443 LKTGDIIEILTSKHSY 458


>gi|30022482|ref|NP_834113.1| GTP pyrophosphokinase [Bacillus cereus ATCC 14579]
 gi|218232359|ref|YP_002369216.1| GTP diphosphokinase [Bacillus cereus B4264]
 gi|218899576|ref|YP_002447987.1| GTP diphosphokinase [Bacillus cereus G9842]
 gi|228902935|ref|ZP_04067076.1| GTP pyrophosphokinase [Bacillus thuringiensis IBL 4222]
 gi|228910243|ref|ZP_04074061.1| GTP pyrophosphokinase [Bacillus thuringiensis IBL 200]
 gi|228941575|ref|ZP_04104123.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar berliner ATCC
           10792]
 gi|228960680|ref|ZP_04122324.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|228967483|ref|ZP_04128511.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228974504|ref|ZP_04135071.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar thuringiensis
           str. T01001]
 gi|228981098|ref|ZP_04141399.1| GTP pyrophosphokinase [Bacillus thuringiensis Bt407]
 gi|229048116|ref|ZP_04193687.1| GTP pyrophosphokinase [Bacillus cereus AH676]
 gi|229111879|ref|ZP_04241425.1| GTP pyrophosphokinase [Bacillus cereus Rock1-15]
 gi|229129687|ref|ZP_04258655.1| GTP pyrophosphokinase [Bacillus cereus BDRD-Cer4]
 gi|229146978|ref|ZP_04275340.1| GTP pyrophosphokinase [Bacillus cereus BDRD-ST24]
 gi|229152610|ref|ZP_04280799.1| GTP pyrophosphokinase [Bacillus cereus m1550]
 gi|296504899|ref|YP_003666599.1| GTP pyrophosphokinase [Bacillus thuringiensis BMB171]
 gi|384188479|ref|YP_005574375.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar chinensis
           CT-43]
 gi|402564115|ref|YP_006606839.1| GTP pyrophosphokinase [Bacillus thuringiensis HD-771]
 gi|410676793|ref|YP_006929164.1| GTP pyrophosphokinase RelA [Bacillus thuringiensis Bt407]
 gi|423358556|ref|ZP_17336059.1| GTP pyrophosphokinase [Bacillus cereus VD022]
 gi|423385906|ref|ZP_17363162.1| GTP pyrophosphokinase [Bacillus cereus BAG1X1-2]
 gi|423527737|ref|ZP_17504182.1| GTP pyrophosphokinase [Bacillus cereus HuB1-1]
 gi|423561125|ref|ZP_17537401.1| GTP pyrophosphokinase [Bacillus cereus MSX-A1]
 gi|423585115|ref|ZP_17561202.1| GTP pyrophosphokinase [Bacillus cereus VD045]
 gi|423631131|ref|ZP_17606878.1| GTP pyrophosphokinase [Bacillus cereus VD154]
 gi|423640514|ref|ZP_17616132.1| GTP pyrophosphokinase [Bacillus cereus VD166]
 gi|423650270|ref|ZP_17625840.1| GTP pyrophosphokinase [Bacillus cereus VD169]
 gi|423657360|ref|ZP_17632659.1| GTP pyrophosphokinase [Bacillus cereus VD200]
 gi|434377574|ref|YP_006612218.1| GTP pyrophosphokinase [Bacillus thuringiensis HD-789]
 gi|452200870|ref|YP_007480951.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Bacillus
           thuringiensis serovar thuringiensis str. IS5056]
 gi|29898040|gb|AAP11314.1| GTP pyrophosphokinase [Bacillus cereus ATCC 14579]
 gi|218160316|gb|ACK60308.1| GTP diphosphokinase [Bacillus cereus B4264]
 gi|218543265|gb|ACK95659.1| GTP diphosphokinase [Bacillus cereus G9842]
 gi|228630871|gb|EEK87511.1| GTP pyrophosphokinase [Bacillus cereus m1550]
 gi|228636475|gb|EEK92943.1| GTP pyrophosphokinase [Bacillus cereus BDRD-ST24]
 gi|228653804|gb|EEL09674.1| GTP pyrophosphokinase [Bacillus cereus BDRD-Cer4]
 gi|228671635|gb|EEL26933.1| GTP pyrophosphokinase [Bacillus cereus Rock1-15]
 gi|228723219|gb|EEL74593.1| GTP pyrophosphokinase [Bacillus cereus AH676]
 gi|228778639|gb|EEM26905.1| GTP pyrophosphokinase [Bacillus thuringiensis Bt407]
 gi|228785221|gb|EEM33233.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar thuringiensis
           str. T01001]
 gi|228792198|gb|EEM39772.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228798986|gb|EEM45959.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|228818082|gb|EEM64159.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar berliner ATCC
           10792]
 gi|228849407|gb|EEM94243.1| GTP pyrophosphokinase [Bacillus thuringiensis IBL 200]
 gi|228856719|gb|EEN01238.1| GTP pyrophosphokinase [Bacillus thuringiensis IBL 4222]
 gi|296325951|gb|ADH08879.1| GTP pyrophosphokinase [Bacillus thuringiensis BMB171]
 gi|326942188|gb|AEA18084.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar chinensis
           CT-43]
 gi|401084428|gb|EJP92674.1| GTP pyrophosphokinase [Bacillus cereus VD022]
 gi|401202179|gb|EJR09041.1| GTP pyrophosphokinase [Bacillus cereus MSX-A1]
 gi|401233758|gb|EJR40244.1| GTP pyrophosphokinase [Bacillus cereus VD045]
 gi|401264498|gb|EJR70610.1| GTP pyrophosphokinase [Bacillus cereus VD154]
 gi|401279575|gb|EJR85497.1| GTP pyrophosphokinase [Bacillus cereus VD166]
 gi|401282688|gb|EJR88587.1| GTP pyrophosphokinase [Bacillus cereus VD169]
 gi|401290103|gb|EJR95807.1| GTP pyrophosphokinase [Bacillus cereus VD200]
 gi|401635962|gb|EJS53717.1| GTP pyrophosphokinase [Bacillus cereus BAG1X1-2]
 gi|401792767|gb|AFQ18806.1| GTP pyrophosphokinase [Bacillus thuringiensis HD-771]
 gi|401876131|gb|AFQ28298.1| GTP pyrophosphokinase [Bacillus thuringiensis HD-789]
 gi|402451400|gb|EJV83219.1| GTP pyrophosphokinase [Bacillus cereus HuB1-1]
 gi|409175922|gb|AFV20227.1| GTP pyrophosphokinase RelA [Bacillus thuringiensis Bt407]
 gi|452106263|gb|AGG03203.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Bacillus
           thuringiensis serovar thuringiensis str. IS5056]
          Length = 727

 Score =  349 bits (896), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 203/496 (40%), Positives = 291/496 (58%), Gaps = 50/496 (10%)

Query: 134 LRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIA 193
           L     YL+  ++ELV RA   A +AH  Q R+SGEP+IIHP++VA IL +L +D  +++
Sbjct: 13  LEKASQYLADEDIELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDPATVS 72

Query: 194 AGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDL 253
           AG LHD VEDT + T E IE EF   +  +V+G   V+KLGK+K K+  H  Q  +A++ 
Sbjct: 73  AGFLHDVVEDTEI-TLEDIEREFNKEIAMLVDG---VTKLGKIKYKS--HEQQ--QAENH 124

Query: 254 RQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIK 313
           R+MF+AM +++RVI++KLADRLHNMRTL H+P  KQ  IA ETL++FAPLA  LG+  IK
Sbjct: 125 RKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGISTIK 184

Query: 314 SELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEI 373
            ELE+ S  Y N + Y     R+ +L K    E EE    +M  I +   L  + ++ EI
Sbjct: 185 WELEDTSLRYLNPQQYY----RIVNLMKRKRAEREEYLDEVMTGIREK--LKEVAIQPEI 238

Query: 374 RSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVH 433
               K  YSIY+ +       NE+  +  +R+++            +  + CY VLG++H
Sbjct: 239 SGRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVV------------NSIKDCYAVLGIIH 286

Query: 434 GIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAH 493
             W P+P   KDYIA PK N YQSLHTT+I    +    LEVQIRT+EM  IAE GIAAH
Sbjct: 287 TCWKPMPGRFKDYIAMPKANLYQSLHTTVIGPKGDP---LEVQIRTKEMHEIAEFGIAAH 343

Query: 494 YSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFV 553
           ++ +                  GKT       +  +++W   I EWQ E      + EF+
Sbjct: 344 WAYK-----------------EGKT-AETTGTLEKKLTWFRQILEWQNE---ASNAEEFM 382

Query: 554 DTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHV 613
           +++  DL    VFVFTP+G++  LP G+  +D+AY +H+EIGNK + AKVNG +V+  + 
Sbjct: 383 ESLKIDLFSDMVFVFTPKGDVMELPLGSVPIDFAYRVHSEIGNKTIGAKVNGKMVTLDYK 442

Query: 614 LANAEVVEIITYNVSF 629
           L   +++EI+T   S+
Sbjct: 443 LKTGDIIEILTSKHSY 458


>gi|407980717|ref|ZP_11161494.1| GTP diphosphokinase [Bacillus sp. HYC-10]
 gi|407412525|gb|EKF34317.1| GTP diphosphokinase [Bacillus sp. HYC-10]
          Length = 736

 Score =  349 bits (896), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 202/490 (41%), Positives = 289/490 (58%), Gaps = 47/490 (9%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           YLS   ++ + RA   A  AH  Q R+SGEP+IIHP++VA IL +LE+D  +IA G LHD
Sbjct: 19  YLSAEHIQFIERAYEYAENAHKEQYRKSGEPYIIHPIQVAGILVDLEMDPSTIAGGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            VEDT+V T E ++E F   V  +V+G   V+KLGK+K K    S ++ +A++ R+MF+A
Sbjct: 79  VVEDTDV-TLEDLKEHFNEEVAMLVDG---VTKLGKIKYK----SQEEQQAENHRKMFVA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M +++RVI++KLADRLHNMRTL H+P  KQ  I+ ETL++FAPLA  LG+ +IK ELE+ 
Sbjct: 131 MAQDIRVILIKLADRLHNMRTLKHLPQEKQRRISNETLEIFAPLAHRLGISKIKWELEDT 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           +  Y N + Y     R+ +L K    E EE    ++ +++D   +  + +K E     K 
Sbjct: 191 ALRYLNPQQYY----RIVNLMKRKRAEREEYLDEVVNEVKDR--VSEVNIKAEFSGRPKH 244

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIY+ ++      NE+  +  +RI            L    + CY VLG++H  W P+
Sbjct: 245 IYSIYRKMVLQNKQFNEIYDLLAVRI------------LVDSIKDCYAVLGIIHTCWKPM 292

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PKPN YQSLHTT+I    +    LEVQIRT EM  IAE GIAAH+     
Sbjct: 293 PGRFKDYIAMPKPNMYQSLHTTVIGPKGDP---LEVQIRTVEMHEIAEYGIAAHW----- 344

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
                  A   G+     T     A    ++SW   I E+Q E   +  + EF++++  D
Sbjct: 345 -------AYKEGKESAEST---EEAVFQKKLSWFREILEFQNE---STDAEEFMESLKID 391

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           L    VFVFTP+G++  LP G+  +D++Y IH+EIGNK + AKVNG +V+  H L   ++
Sbjct: 392 LFSDMVFVFTPKGDVIELPSGSVPIDFSYRIHSEIGNKTIGAKVNGKMVTLDHKLKTGDI 451

Query: 620 VEIITYNVSF 629
           +EI+T   S+
Sbjct: 452 IEILTSKHSY 461


>gi|19704814|ref|NP_604376.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
           [Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
 gi|296327789|ref|ZP_06870328.1| GTP diphosphokinase [Fusobacterium nucleatum subsp. nucleatum ATCC
           23726]
 gi|19715157|gb|AAL95675.1| Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase
           [Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
 gi|296155136|gb|EFG95914.1| GTP diphosphokinase [Fusobacterium nucleatum subsp. nucleatum ATCC
           23726]
          Length = 725

 Score =  349 bits (895), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 197/498 (39%), Positives = 301/498 (60%), Gaps = 62/498 (12%)

Query: 131 WEDLRPTISYLSPNELEL----VRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELE 186
           WE L   +     N L L    ++ AL  A E+H GQ R+SG+ +IIHPVEVA+IL +++
Sbjct: 5   WEQL---LDKAKANHLNLDFDKIKLALGFAEESHQGQYRKSGDDYIIHPVEVAKILMDMK 61

Query: 187 LDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQ 246
           +D ++I AGLLHD VEDT ++    I+  FG TV  +V+G   V+KL  L    +N    
Sbjct: 62  MDTDTIVAGLLHDVVEDT-LIPIADIKYNFGDTVATLVDG---VTKLKTLPNGTKN---- 113

Query: 247 DVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKL 306
             +A+++R+M LAM E +RVI++KLADRLHNMRTL  M P KQ SI+ ETL ++APLA  
Sbjct: 114 --QAENIRKMILAMAENIRVILIKLADRLHNMRTLKFMKPEKQQSISKETLDIYAPLAHR 171

Query: 307 LGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDL 366
           LGM +IKSELE+++F Y + +++ ++KR V +  +E +  +E   + +++ + D      
Sbjct: 172 LGMAKIKSELEDIAFSYLHHDEFLEIKRLVDNTKEERKDYIENFIRTIIRTLSD------ 225

Query: 367 MTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICY 426
           + +K E++   K  YSIYK + +     +++  +  +R+I++ K              CY
Sbjct: 226 LDIKAEVKGRFKHFYSIYKKMYQKGKEFDDIYDLMGVRVIVEDKAT------------CY 273

Query: 427 HVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIA 486
           HVLG+VH  +TP+P   KDYIA PK N YQS+HTT++  L +    +E+QIRT++MD IA
Sbjct: 274 HVLGIVHSQYTPVPGRFKDYIAVPKSNNYQSIHTTIVGPLGKF---IEIQIRTKDMDDIA 330

Query: 487 ERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGN 546
           E GIAAH++            + N +S +   +            WL  I E+Q E   +
Sbjct: 331 EEGIAAHWN-----------YKENKKSSKDDNIY----------GWLRHIIEFQNE---S 366

Query: 547 MTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGN 606
            ++ +F++ +T D+    VF F+P+G+I  LP GAT +D+A+M+HT++G K V AKVNG 
Sbjct: 367 DSTEDFIEGVTGDIDRGTVFTFSPKGDIIELPVGATALDFAFMVHTQVGCKCVGAKVNGR 426

Query: 607 LVSPTHVLANAEVVEIIT 624
           +V+  H L + + VEIIT
Sbjct: 427 MVTIDHKLKSGDKVEIIT 444


>gi|323455208|gb|EGB11077.1| hypothetical protein AURANDRAFT_52662, partial [Aureococcus
           anophagefferens]
          Length = 467

 Score =  349 bits (895), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 199/484 (41%), Positives = 280/484 (57%), Gaps = 42/484 (8%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           YL P+  + VR A+ +AF AH GQKRRSGEPF+ HPVEVA+IL    +D +++ +GLLHD
Sbjct: 14  YLRPSGRKAVRYAVEVAFLAHRGQKRRSGEPFVTHPVEVAKILARTHMDRDTVVSGLLHD 73

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
           TVEDT++ TF  +E  FG  VRRIVEGETKVSKL K+         +  + +++R MF+A
Sbjct: 74  TVEDTDL-TFGEVEAMFGVDVRRIVEGETKVSKLPKMARDLPAADAEKEQVENMRSMFIA 132

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M E+ R+++VKLADRLHNMRTL  MPP K++ I+ ETL++FAPLA  LGM+Q K+ELE  
Sbjct: 133 MAEDWRIVVVKLADRLHNMRTLRFMPPRKRAKISRETLEIFAPLAHRLGMWQYKTELEET 192

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           SF +    +YA +   +A      E  LEE    L   + DD  +        I    K 
Sbjct: 193 SFEHLFPAEYAALDEAIARKRTTVEAALEECRGKLETMLMDDVMIKGRMRTVSIEGRTKS 252

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YS +K + + +  I  ++ +  LR+++K +         +   +CYHVLG VH  WTP+
Sbjct: 253 CYSTWKKMQRQQCGIERIDDLVALRVVLKAERPEAE----ADTSLCYHVLGKVHSTWTPL 308

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           PR +KDYI++PKPNGY+SLHTT++         LEVQIRT++M  +AE G AAH++ +  
Sbjct: 309 PRTLKDYISSPKPNGYRSLHTTVLV----GSQPLEVQIRTDDMHRVAELGAAAHWAYK-- 362

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
                                    +    + WL  IREW  +     +S  F+  +  +
Sbjct: 363 -------------------------DTDASLPWLQIIREWHAQVD---SSSVFMQLVRNE 394

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVD-YAYMIHTEIGN--KMVAAKVNGNLVSPTHVLAN 616
           LLG+RVFVF PRG I NL KGAT+ D  A+++  E  +  +   A VNG      + L N
Sbjct: 395 LLGTRVFVFAPRGRILNLAKGATLADAVAHVVSEESQSDRRGALAYVNGQREDAEYELRN 454

Query: 617 AEVV 620
            ++V
Sbjct: 455 GDIV 458


>gi|229062102|ref|ZP_04199427.1| GTP pyrophosphokinase [Bacillus cereus AH603]
 gi|228717254|gb|EEL68929.1| GTP pyrophosphokinase [Bacillus cereus AH603]
          Length = 727

 Score =  349 bits (895), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 202/496 (40%), Positives = 292/496 (58%), Gaps = 50/496 (10%)

Query: 134 LRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIA 193
           L     YL+  ++ELV RA   A +AH  Q R+SGEP+IIHP++VA IL +L +D  +++
Sbjct: 13  LEKASQYLADGDIELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDPATVS 72

Query: 194 AGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDL 253
           AG LHD VEDT + T E IE EF   +  +V+G   V+KLGK+K K+  H  Q  +A++ 
Sbjct: 73  AGFLHDVVEDTEI-TLEDIEREFNKEIAMLVDG---VTKLGKIKYKS--HEQQ--QAENH 124

Query: 254 RQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIK 313
           R+MF+AM +++RVI++KLADRLHNMRTL H+P  KQ  IA ETL++FAPLA  LG+  IK
Sbjct: 125 RKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGISTIK 184

Query: 314 SELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEI 373
            ELE+ S  Y N + Y     R+ +L K    E EE    +M  I +   L  ++++ EI
Sbjct: 185 WELEDTSLRYLNPQQYY----RIVNLMKRKRAEREEYLDEVMTGIREK--LKEVSIQPEI 238

Query: 374 RSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVH 433
               K  YSIY+ +       NE+  +  +R+++            +  + CY VLG++H
Sbjct: 239 SGRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVV------------NSIKDCYAVLGIIH 286

Query: 434 GIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAH 493
             W P+P   KDYIA PK N YQSLHTT+I    +    LEVQIRT+EM  IAE GIAAH
Sbjct: 287 TCWKPMPGRFKDYIAMPKANLYQSLHTTVIGPKGDP---LEVQIRTKEMHEIAEFGIAAH 343

Query: 494 YSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFV 553
           ++ +                  GKT       +  +++W   I EWQ E      + EF+
Sbjct: 344 WAYK-----------------EGKT-AETTGTLEKKLTWFRQILEWQNE---ASNAEEFM 382

Query: 554 DTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHV 613
           +++  DL    VFVFTP+G++  LP G+  +D++Y +H+EIGNK + AKVNG +V+  + 
Sbjct: 383 ESLKIDLFSDMVFVFTPKGDVMELPLGSVPIDFSYRVHSEIGNKTIGAKVNGKMVTLDYK 442

Query: 614 LANAEVVEIITYNVSF 629
           L   +++EI+T   S+
Sbjct: 443 LKTGDIIEILTSKHSY 458


>gi|423521737|ref|ZP_17498210.1| GTP pyrophosphokinase [Bacillus cereus HuA4-10]
 gi|401176399|gb|EJQ83594.1| GTP pyrophosphokinase [Bacillus cereus HuA4-10]
          Length = 727

 Score =  349 bits (895), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 202/496 (40%), Positives = 292/496 (58%), Gaps = 50/496 (10%)

Query: 134 LRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIA 193
           L     YL+  ++ELV RA   A +AH  Q R+SGEP+IIHP++VA IL +L +D  +++
Sbjct: 13  LEKASQYLADEDIELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDPATVS 72

Query: 194 AGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDL 253
           AG LHD VEDT + T E IE EF   +  +V+G   V+KLGK+K K+  H  Q  +A++ 
Sbjct: 73  AGFLHDVVEDTEI-TLEDIEREFNKEIAMLVDG---VTKLGKIKYKS--HEQQ--QAENH 124

Query: 254 RQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIK 313
           R+MF+AM +++RVI++KLADRLHNMRTL H+P  KQ  IA ETL++FAPLA  LG+  IK
Sbjct: 125 RKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGISTIK 184

Query: 314 SELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEI 373
            ELE+ S  Y N + Y     R+ +L K    E EE    +M  I +   L  ++++ EI
Sbjct: 185 WELEDTSLRYLNPQQYY----RIVNLMKRKRAEREEYLDEVMTGIREK--LKEVSIQPEI 238

Query: 374 RSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVH 433
               K  YSIY+ +       NE+  +  +R+++            +  + CY VLG++H
Sbjct: 239 SGRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVV------------NSIKDCYAVLGIIH 286

Query: 434 GIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAH 493
             W P+P   KDYIA PK N YQSLHTT+I    +    LEVQIRT+EM  IAE GIAAH
Sbjct: 287 TCWKPMPGRFKDYIAMPKANLYQSLHTTVIGPKGDP---LEVQIRTKEMHEIAEFGIAAH 343

Query: 494 YSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFV 553
           ++ +                  GKT       +  +++W   I EWQ E      + EF+
Sbjct: 344 WAYK-----------------EGKT-AETTGTLEKKLTWFRQILEWQNE---ASNAEEFM 382

Query: 554 DTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHV 613
           +++  DL    VFVFTP+G++  LP G+  +D++Y +H+EIGNK + AKVNG +V+  + 
Sbjct: 383 ESLKIDLFSDMVFVFTPKGDVMELPLGSVPIDFSYRVHSEIGNKTIGAKVNGKMVTLDYK 442

Query: 614 LANAEVVEIITYNVSF 629
           L   +++EI+T   S+
Sbjct: 443 LKTGDIIEILTSKHSY 458


>gi|423478548|ref|ZP_17455263.1| GTP pyrophosphokinase [Bacillus cereus BAG6X1-1]
 gi|402427544|gb|EJV59650.1| GTP pyrophosphokinase [Bacillus cereus BAG6X1-1]
          Length = 726

 Score =  349 bits (895), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 202/496 (40%), Positives = 292/496 (58%), Gaps = 50/496 (10%)

Query: 134 LRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIA 193
           L     YL+  ++ELV RA   A +AH  Q R+SGEP+IIHP++VA IL +L +D  +++
Sbjct: 13  LEKASQYLADEDIELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDPATVS 72

Query: 194 AGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDL 253
           AG LHD VEDT + T E IE EF   +  +V+G   V+KLGK+K K+  H  Q  +A++ 
Sbjct: 73  AGFLHDVVEDTEI-TLEDIEREFNKEIAMLVDG---VTKLGKIKYKS--HEQQ--QAENH 124

Query: 254 RQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIK 313
           R+MF+AM +++RVI++KLADRLHNMRTL H+P  KQ  IA ETL++FAPLA  LG+  IK
Sbjct: 125 RKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGISTIK 184

Query: 314 SELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEI 373
            ELE+ S  Y N + Y     R+ +L K    E EE    +M  I +   L  ++++ EI
Sbjct: 185 WELEDTSLRYLNPQQYY----RIVNLMKRKRAEREEYLDEVMTGIREK--LKEVSIQPEI 238

Query: 374 RSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVH 433
               K  YSIY+ +       NE+  +  +R+++            +  + CY VLG++H
Sbjct: 239 SGRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVV------------NSIKDCYAVLGIIH 286

Query: 434 GIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAH 493
             W P+P   KDYIA PK N YQSLHTT+I    +    LEVQIRT+EM  IAE GIAAH
Sbjct: 287 TCWKPMPGRFKDYIAMPKANLYQSLHTTVIGPKGDP---LEVQIRTKEMHEIAEFGIAAH 343

Query: 494 YSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFV 553
           ++ +                  GKT       +  +++W   I EWQ E      + EF+
Sbjct: 344 WAYK-----------------EGKT-AETTGTLEKKLTWFRQILEWQNE---ASNAEEFM 382

Query: 554 DTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHV 613
           +++  DL    VFVFTP+G++  LP G+  +D++Y +H+EIGNK + AKVNG +V+  + 
Sbjct: 383 ESLKIDLFSDMVFVFTPKGDVMELPLGSVPIDFSYRVHSEIGNKTIGAKVNGKMVTLDYK 442

Query: 614 LANAEVVEIITYNVSF 629
           L   +++EI+T   S+
Sbjct: 443 LKTGDIIEILTSKHSY 458


>gi|423400750|ref|ZP_17377923.1| GTP pyrophosphokinase [Bacillus cereus BAG2X1-2]
 gi|401653740|gb|EJS71283.1| GTP pyrophosphokinase [Bacillus cereus BAG2X1-2]
          Length = 727

 Score =  349 bits (895), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 202/496 (40%), Positives = 292/496 (58%), Gaps = 50/496 (10%)

Query: 134 LRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIA 193
           L     YL+  ++ELV RA   A +AH  Q R+SGEP+IIHP++VA IL +L +D  +++
Sbjct: 13  LEKASQYLADEDIELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDPATVS 72

Query: 194 AGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDL 253
           AG LHD VEDT + T E IE EF   +  +V+G   V+KLGK+K K+  H  Q  +A++ 
Sbjct: 73  AGFLHDVVEDTEI-TLEDIEREFNKEIAMLVDG---VTKLGKIKYKS--HEQQ--QAENH 124

Query: 254 RQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIK 313
           R+MF+AM +++RVI++KLADRLHNMRTL H+P  KQ  IA ETL++FAPLA  LG+  IK
Sbjct: 125 RKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGISTIK 184

Query: 314 SELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEI 373
            ELE+ S  Y N + Y     R+ +L K    E EE    +M  I +   L  ++++ EI
Sbjct: 185 WELEDTSLRYLNPQQYY----RIVNLMKRKRAEREEYLDEVMTGIREK--LKEVSIQPEI 238

Query: 374 RSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVH 433
               K  YSIY+ +       NE+  +  +R+++            +  + CY VLG++H
Sbjct: 239 SGRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVV------------NSIKDCYAVLGIIH 286

Query: 434 GIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAH 493
             W P+P   KDYIA PK N YQSLHTT+I    +    LEVQIRT+EM  IAE GIAAH
Sbjct: 287 TCWKPMPGRFKDYIAMPKANLYQSLHTTVIGPKGDP---LEVQIRTKEMHEIAEFGIAAH 343

Query: 494 YSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFV 553
           ++ +                  GKT       +  +++W   I EWQ E      + EF+
Sbjct: 344 WAYK-----------------EGKT-AETTGTLEKKLTWFRQILEWQNE---ASNAEEFM 382

Query: 554 DTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHV 613
           +++  DL    VFVFTP+G++  LP G+  +D++Y +H+EIGNK + AKVNG +V+  + 
Sbjct: 383 ESLKIDLFSDMVFVFTPKGDVMELPLGSVPIDFSYRVHSEIGNKTIGAKVNGKMVTLDYK 442

Query: 614 LANAEVVEIITYNVSF 629
           L   +++EI+T   S+
Sbjct: 443 LKTGDIIEILTSKHSY 458


>gi|422339976|ref|ZP_16420932.1| GTP diphosphokinase [Fusobacterium nucleatum subsp. polymorphum
           F0401]
 gi|355370415|gb|EHG17798.1| GTP diphosphokinase [Fusobacterium nucleatum subsp. polymorphum
           F0401]
          Length = 725

 Score =  349 bits (895), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 191/480 (39%), Positives = 296/480 (61%), Gaps = 55/480 (11%)

Query: 145 ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDT 204
           + + ++ AL  A E+H GQ R+SG+ +IIHPVEVA+IL ++++D ++I AGLLHD VEDT
Sbjct: 20  DFDKIKLALGFAEESHQGQYRKSGDDYIIHPVEVAKILMDMKMDTDTIVAGLLHDVVEDT 79

Query: 205 NVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEV 264
            ++    I+  FG TV  +V+G   V+KL  L    +N      +A+++R+M LAM E +
Sbjct: 80  -LIPIADIKYNFGDTVATLVDG---VTKLKALPNGTKN------QAENIRKMILAMAENI 129

Query: 265 RVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYT 324
           RVI++KLADRLHNMRTL  M P KQ SI+ ETL ++APLA  LGM +IKSELE+++F Y 
Sbjct: 130 RVILIKLADRLHNMRTLKFMKPEKQQSISKETLDIYAPLAHRLGMAKIKSELEDMAFSYL 189

Query: 325 NAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIY 384
           + +++ ++KR V +  +E +  +E   + +++ + D      + +K E++   K  YSIY
Sbjct: 190 HHDEFLEIKRLVDNTKEERKDYIENFIRTIIRTLSD------LGIKAEVKGRFKHFYSIY 243

Query: 385 KAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMK 444
           K + +     +++  +  +R+I++ K              CYHVLG+VH  +TP+P   K
Sbjct: 244 KKMYQKGKEFDDIYDLMGVRVIVEDKAT------------CYHVLGIVHSQYTPVPGRFK 291

Query: 445 DYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLV 504
           DYIA PK N YQS+HTT++  L +    +E+QIRT++MD IAE GIAAH++         
Sbjct: 292 DYIAVPKSNNYQSIHTTIVGPLGKF---IEIQIRTKDMDDIAEEGIAAHWN--------- 339

Query: 505 GHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSR 564
              + N +S +   +            WL  I E+Q E   + ++ +F++ +T D+    
Sbjct: 340 --YKENKKSSKDDNIY----------GWLRHIIEFQNE---SDSTEDFIEGVTGDIDRGT 384

Query: 565 VFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
           VF F+P+G+I  LP GAT +D+A+M+HT++G K V AKVNG +V+  H L + + VEIIT
Sbjct: 385 VFTFSPKGDIIELPVGATALDFAFMVHTQVGCKCVGAKVNGRMVTIDHKLKSGDKVEIIT 444


>gi|254303921|ref|ZP_04971279.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [Fusobacterium
           nucleatum subsp. polymorphum ATCC 10953]
 gi|22087659|gb|AAM90994.1|AF525504_1 ppGpp [Fusobacterium nucleatum]
 gi|148324113|gb|EDK89363.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [Fusobacterium
           nucleatum subsp. polymorphum ATCC 10953]
          Length = 725

 Score =  349 bits (895), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 191/480 (39%), Positives = 296/480 (61%), Gaps = 55/480 (11%)

Query: 145 ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDT 204
           + + ++ AL  A E+H GQ R+SG+ +IIHPVEVA+IL ++++D ++I AGLLHD VEDT
Sbjct: 20  DFDKIKLALGFAEESHQGQYRKSGDDYIIHPVEVAKILMDMKMDTDTIVAGLLHDVVEDT 79

Query: 205 NVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEV 264
            ++    I+  FG TV  +V+G   V+KL  L    +N      +A+++R+M LAM E +
Sbjct: 80  -LIPIADIKYNFGDTVATLVDG---VTKLKALPNGTKN------QAENIRKMILAMAENI 129

Query: 265 RVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYT 324
           RVI++KLADRLHNMRTL  M P KQ SI+ ETL ++APLA  LGM +IKSELE+++F Y 
Sbjct: 130 RVILIKLADRLHNMRTLKFMKPEKQQSISKETLDIYAPLAHRLGMAKIKSELEDIAFSYL 189

Query: 325 NAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIY 384
           + +++ ++KR V +  +E +  +E   + +++ + D      + +K E++   K  YSIY
Sbjct: 190 HHDEFLEIKRLVDNTKEERKDYIENFIRTIIRTLSD------LGIKAEVKGRFKHFYSIY 243

Query: 385 KAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMK 444
           K + +     +++  +  +R+I++ K              CYHVLG+VH  +TP+P   K
Sbjct: 244 KKMYQKGKEFDDIYDLMGVRVIVEDKAT------------CYHVLGIVHSQYTPVPGRFK 291

Query: 445 DYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLV 504
           DYIA PK N YQS+HTT++  L +    +E+QIRT++MD IAE GIAAH++         
Sbjct: 292 DYIAVPKSNNYQSIHTTIVGPLGKF---IEIQIRTKDMDDIAEEGIAAHWN--------- 339

Query: 505 GHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSR 564
              + N +S +   +            WL  I E+Q E   + ++ +F++ +T D+    
Sbjct: 340 --YKENKKSSKDDNIY----------GWLRHIIEFQNE---SDSTEDFIEGVTGDIDRGT 384

Query: 565 VFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
           VF F+P+G+I  LP GAT +D+A+M+HT++G K V AKVNG +V+  H L + + VEIIT
Sbjct: 385 VFTFSPKGDIIELPVGATALDFAFMVHTQVGCKCVGAKVNGRMVTIDHKLKSGDKVEIIT 444


>gi|398307316|ref|ZP_10510902.1| RelA/SpoT family protein [Bacillus vallismortis DV1-F-3]
          Length = 734

 Score =  348 bits (894), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 200/491 (40%), Positives = 292/491 (59%), Gaps = 50/491 (10%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           SYLS   +  V RA + A +AH  Q R+SGEP+IIHP++VA IL +LE+D  +IA G LH
Sbjct: 18  SYLSDEHIAFVERAYLYAEDAHREQYRKSGEPYIIHPIQVAGILVDLEMDPSTIAGGFLH 77

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT+V T + ++E F   V  +V+G   V+KLGK+K K    S ++ +A++ R+MF+
Sbjct: 78  DVVEDTDV-TLDDLKEAFSEEVAMLVDG---VTKLGKIKYK----SQEEQQAENHRKMFV 129

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM +++RVI++KLADRLHNMRTL H+P  KQ  I+ ETL++FAPLA  LG+ +IK ELE+
Sbjct: 130 AMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRISNETLEIFAPLAHRLGISKIKWELED 189

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
            +  Y N + Y ++   +     E E  +EE    + K++E+      + +K +     K
Sbjct: 190 TALRYLNPQQYYRIVNLMKKKRAERELYVEEVVNEVKKRVEE------VHIKADFSGRPK 243

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIY+ ++      NE+  +  +RI            L +  + CY VLG++H  W P
Sbjct: 244 HIYSIYRKMVLQNKQFNEIYDLLAVRI------------LVNSIKDCYAVLGIIHTCWKP 291

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PKPN YQSLHTT+I    +    LEVQIRT EM  IAE G+AAH++ + 
Sbjct: 292 MPGRFKDYIAMPKPNMYQSLHTTVIGPKGDP---LEVQIRTFEMHEIAEYGVAAHWAYK- 347

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                 G A   G            A    ++SW   I E+Q E   +  + EF++++  
Sbjct: 348 -----EGKAASEG------------ATFEKKLSWFREILEFQNE---STDAEEFMESLKI 387

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           DL    V+VFTP+G++  LP G+  +D++Y IH+EIGNK + AKVNG +V+  H L   +
Sbjct: 388 DLFSDMVYVFTPKGDVIELPSGSVPIDFSYRIHSEIGNKTIGAKVNGKMVTLDHKLRTGD 447

Query: 619 VVEIITYNVSF 629
           +VEI+T   S+
Sbjct: 448 IVEILTSKHSY 458


>gi|423558014|ref|ZP_17534316.1| GTP pyrophosphokinase [Bacillus cereus MC67]
 gi|401191282|gb|EJQ98304.1| GTP pyrophosphokinase [Bacillus cereus MC67]
          Length = 727

 Score =  348 bits (894), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 202/496 (40%), Positives = 292/496 (58%), Gaps = 50/496 (10%)

Query: 134 LRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIA 193
           L     YL+  ++ELV RA   A +AH  Q R+SGEP+IIHP++VA IL +L +D  +++
Sbjct: 13  LEKASQYLADEDIELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDPATVS 72

Query: 194 AGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDL 253
           AG LHD VEDT + T E IE EF   +  +V+G   V+KLGK+K K+  H  Q  +A++ 
Sbjct: 73  AGFLHDVVEDTEI-TLEDIEREFNKEIAMLVDG---VTKLGKIKYKS--HEQQ--QAENH 124

Query: 254 RQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIK 313
           R+MF+AM +++RVI++KLADRLHNMRTL H+P  KQ  IA ETL++FAPLA  LG+  IK
Sbjct: 125 RKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGISTIK 184

Query: 314 SELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEI 373
            ELE+ S  Y N + Y     R+ +L K    E EE    +M  I +   L  ++++ EI
Sbjct: 185 WELEDTSLRYLNPQQYY----RIVNLMKRKRAEREEYLDEVMTGIREK--LKEVSIQPEI 238

Query: 374 RSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVH 433
               K  YSIY+ +       NE+  +  +R+++            +  + CY VLG++H
Sbjct: 239 SGRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVV------------NSIKDCYAVLGIIH 286

Query: 434 GIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAH 493
             W P+P   KDYIA PK N YQSLHTT+I    +    LEVQIRT+EM  IAE GIAAH
Sbjct: 287 TCWKPMPGRFKDYIAMPKANLYQSLHTTVIGPKGDP---LEVQIRTKEMHEIAEFGIAAH 343

Query: 494 YSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFV 553
           ++ +                  GKT       +  +++W   I EWQ E      + EF+
Sbjct: 344 WAYK-----------------EGKT-AETTGTLEKKLTWFRQILEWQNE---ASNAEEFM 382

Query: 554 DTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHV 613
           +++  DL    VFVFTP+G++  LP G+  +D++Y +H+EIGNK + AKVNG +V+  + 
Sbjct: 383 ESLKIDLFSDMVFVFTPKGDVMELPLGSVPIDFSYRVHSEIGNKTIGAKVNGKMVTLDYK 442

Query: 614 LANAEVVEIITYNVSF 629
           L   +++EI+T   S+
Sbjct: 443 LKTGDIIEILTSKHSY 458


>gi|407706935|ref|YP_006830520.1| hypothetical protein MC28_3699 [Bacillus thuringiensis MC28]
 gi|423615251|ref|ZP_17591085.1| GTP pyrophosphokinase [Bacillus cereus VD115]
 gi|401260930|gb|EJR67097.1| GTP pyrophosphokinase [Bacillus cereus VD115]
 gi|407384620|gb|AFU15121.1| GTP pyrophosphokinase [Bacillus thuringiensis MC28]
          Length = 727

 Score =  348 bits (894), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 202/496 (40%), Positives = 292/496 (58%), Gaps = 50/496 (10%)

Query: 134 LRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIA 193
           L     YL+  ++ELV RA   A +AH  Q R+SGEP+IIHP++VA IL +L +D  +++
Sbjct: 13  LEKASQYLADEDIELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDPATVS 72

Query: 194 AGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDL 253
           AG LHD VEDT + T E IE EF   +  +V+G   V+KLGK+K K+  H  Q  +A++ 
Sbjct: 73  AGFLHDVVEDTEI-TLEDIEREFNKEIAMLVDG---VTKLGKIKYKS--HEQQ--QAENH 124

Query: 254 RQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIK 313
           R+MF+AM +++RVI++KLADRLHNMRTL H+P  KQ  IA ETL++FAPLA  LG+  IK
Sbjct: 125 RKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGISTIK 184

Query: 314 SELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEI 373
            ELE+ S  Y N + Y     R+ +L K    E EE    +M  I +   L  ++++ EI
Sbjct: 185 WELEDTSLRYLNPQQYY----RIVNLMKRKRAEREEYLDEVMTGIREK--LKEVSIQPEI 238

Query: 374 RSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVH 433
               K  YSIY+ +       NE+  +  +R+++            +  + CY VLG++H
Sbjct: 239 SGRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVV------------NSIKDCYAVLGIIH 286

Query: 434 GIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAH 493
             W P+P   KDYIA PK N YQSLHTT+I    +    LEVQIRT+EM  IAE GIAAH
Sbjct: 287 TCWKPMPGRFKDYIAMPKANLYQSLHTTVIGPKGDP---LEVQIRTKEMHEIAEFGIAAH 343

Query: 494 YSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFV 553
           ++ +                  GKT       +  +++W   I EWQ E      + EF+
Sbjct: 344 WAYK-----------------EGKT-AETTGTLEKKLTWFRQILEWQNE---ASNAEEFM 382

Query: 554 DTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHV 613
           +++  DL    VFVFTP+G++  LP G+  +D++Y +H+EIGNK + AKVNG +V+  + 
Sbjct: 383 ESLKIDLFSDMVFVFTPKGDVMELPLGSVPIDFSYRVHSEIGNKTIGAKVNGKMVTLDYK 442

Query: 614 LANAEVVEIITYNVSF 629
           L   +++EI+T   S+
Sbjct: 443 LKTGDIIEILTSKHSY 458


>gi|229025869|ref|ZP_04182265.1| GTP pyrophosphokinase [Bacillus cereus AH1272]
 gi|423389281|ref|ZP_17366507.1| GTP pyrophosphokinase [Bacillus cereus BAG1X1-3]
 gi|423417674|ref|ZP_17394763.1| GTP pyrophosphokinase [Bacillus cereus BAG3X2-1]
 gi|228735421|gb|EEL86020.1| GTP pyrophosphokinase [Bacillus cereus AH1272]
 gi|401106845|gb|EJQ14802.1| GTP pyrophosphokinase [Bacillus cereus BAG3X2-1]
 gi|401641372|gb|EJS59089.1| GTP pyrophosphokinase [Bacillus cereus BAG1X1-3]
          Length = 727

 Score =  348 bits (894), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 202/496 (40%), Positives = 292/496 (58%), Gaps = 50/496 (10%)

Query: 134 LRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIA 193
           L     YL+  ++ELV RA   A +AH  Q R+SGEP+IIHP++VA IL +L +D  +++
Sbjct: 13  LEKASQYLADEDIELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDPATVS 72

Query: 194 AGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDL 253
           AG LHD VEDT + T E IE EF   +  +V+G   V+KLGK+K K+  H  Q  +A++ 
Sbjct: 73  AGFLHDVVEDTEI-TLEDIEREFNKEIAMLVDG---VTKLGKIKYKS--HEQQ--QAENH 124

Query: 254 RQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIK 313
           R+MF+AM +++RVI++KLADRLHNMRTL H+P  KQ  IA ETL++FAPLA  LG+  IK
Sbjct: 125 RKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGISTIK 184

Query: 314 SELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEI 373
            ELE+ S  Y N + Y     R+ +L K    E EE    +M  I +   L  ++++ EI
Sbjct: 185 WELEDTSLRYLNPQQYY----RIVNLMKRKRAEREEYLDEVMTGIREK--LKEVSIQPEI 238

Query: 374 RSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVH 433
               K  YSIY+ +       NE+  +  +R+++            +  + CY VLG++H
Sbjct: 239 SGRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVV------------NSIKDCYAVLGIIH 286

Query: 434 GIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAH 493
             W P+P   KDYIA PK N YQSLHTT+I    +    LEVQIRT+EM  IAE GIAAH
Sbjct: 287 TCWKPMPGRFKDYIAMPKANLYQSLHTTVIGPKGDP---LEVQIRTKEMHEIAEFGIAAH 343

Query: 494 YSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFV 553
           ++ +                  GKT       +  +++W   I EWQ E      + EF+
Sbjct: 344 WAYK-----------------EGKT-AETTGTLEKKLTWFRQILEWQNE---ASNAEEFM 382

Query: 554 DTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHV 613
           +++  DL    VFVFTP+G++  LP G+  +D++Y +H+EIGNK + AKVNG +V+  + 
Sbjct: 383 ESLKIDLFSDMVFVFTPKGDVMELPLGSVPIDFSYRVHSEIGNKTIGAKVNGKMVTLDYK 442

Query: 614 LANAEVVEIITYNVSF 629
           L   +++EI+T   S+
Sbjct: 443 LKTGDIIEILTSKHSY 458


>gi|229032057|ref|ZP_04188039.1| GTP pyrophosphokinase [Bacillus cereus AH1271]
 gi|228729249|gb|EEL80244.1| GTP pyrophosphokinase [Bacillus cereus AH1271]
          Length = 727

 Score =  348 bits (894), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 202/496 (40%), Positives = 292/496 (58%), Gaps = 50/496 (10%)

Query: 134 LRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIA 193
           L     YL+  ++ELV RA   A +AH  Q R+SGEP+IIHP++VA IL +L +D  +++
Sbjct: 13  LEKASQYLADEDIELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDPATVS 72

Query: 194 AGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDL 253
           AG LHD VEDT + T E IE EF   +  +V+G   V+KLGK+K K+  H  Q  +A++ 
Sbjct: 73  AGFLHDVVEDTEI-TLEDIEREFNKEIAMLVDG---VTKLGKIKYKS--HEQQ--QAENH 124

Query: 254 RQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIK 313
           R+MF+AM +++RVI++KLADRLHNMRTL H+P  KQ  IA ETL++FAPLA  LG+  IK
Sbjct: 125 RKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGISTIK 184

Query: 314 SELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEI 373
            ELE+ S  Y N + Y     R+ +L K    E EE    +M  I +   L  ++++ EI
Sbjct: 185 WELEDTSLRYLNPQQYY----RIVNLMKRKRAEREEYLDEVMTGIREK--LKEVSIQPEI 238

Query: 374 RSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVH 433
               K  YSIY+ +       NE+  +  +R+++            +  + CY VLG++H
Sbjct: 239 SGRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVV------------NSIKDCYAVLGIIH 286

Query: 434 GIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAH 493
             W P+P   KDYIA PK N YQSLHTT+I    +    LEVQIRT+EM  IAE GIAAH
Sbjct: 287 TCWKPMPGRFKDYIAMPKANLYQSLHTTVIGPKGDP---LEVQIRTKEMHEIAEFGIAAH 343

Query: 494 YSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFV 553
           ++ +                  GKT       +  +++W   I EWQ E      + EF+
Sbjct: 344 WAYK-----------------EGKT-AETTGTLEKKLTWFRQILEWQNE---ASNAEEFM 382

Query: 554 DTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHV 613
           +++  DL    VFVFTP+G++  LP G+  +D++Y +H+EIGNK + AKVNG +V+  + 
Sbjct: 383 ESLKIDLFSDMVFVFTPKGDVMELPLGSVPIDFSYRVHSEIGNKTIGAKVNGKMVTLDYK 442

Query: 614 LANAEVVEIITYNVSF 629
           L   +++EI+T   S+
Sbjct: 443 LKTGDIIEILTSKHSY 458


>gi|229192618|ref|ZP_04319579.1| GTP pyrophosphokinase [Bacillus cereus ATCC 10876]
 gi|228590925|gb|EEK48783.1| GTP pyrophosphokinase [Bacillus cereus ATCC 10876]
          Length = 727

 Score =  348 bits (894), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 203/496 (40%), Positives = 290/496 (58%), Gaps = 50/496 (10%)

Query: 134 LRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIA 193
           L     YL   ++ELV RA   A +AH  Q R+SGEP+IIHP++VA IL +L +D  +++
Sbjct: 13  LEKASQYLVDEDIELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDPATVS 72

Query: 194 AGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDL 253
           AG LHD VEDT + T E IE EF   +  +V+G   V+KLGK+K K+  H  Q  +A++ 
Sbjct: 73  AGFLHDVVEDTEI-TLEDIEREFNKEIAMLVDG---VTKLGKIKYKS--HEQQ--QAENH 124

Query: 254 RQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIK 313
           R+MF+AM +++RVI++KLADRLHNMRTL H+P  KQ  IA ETL++FAPLA  LG+  IK
Sbjct: 125 RKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGISTIK 184

Query: 314 SELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEI 373
            ELE+ S  Y N + Y     R+ +L K    E EE    +M  I +   L  + ++ EI
Sbjct: 185 WELEDTSLRYLNPQQYY----RIVNLMKRKRAEREEYLDEVMTGIREK--LKEVAIQPEI 238

Query: 374 RSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVH 433
               K  YSIY+ +       NE+  +  +R+++            +  + CY VLG++H
Sbjct: 239 SGRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVV------------NSIKDCYAVLGIIH 286

Query: 434 GIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAH 493
             W P+P   KDYIA PK N YQSLHTT+I    +    LEVQIRT+EM  IAE GIAAH
Sbjct: 287 TCWKPMPGRFKDYIAMPKANLYQSLHTTVIGPKGDP---LEVQIRTKEMHEIAEFGIAAH 343

Query: 494 YSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFV 553
           ++ +                  GKT       +  +++W   I EWQ E      + EF+
Sbjct: 344 WAYK-----------------EGKT-AETTGTLEKKLTWFRQILEWQNE---TSNAEEFM 382

Query: 554 DTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHV 613
           +++  DL    VFVFTP+G++  LP G+  +D+AY +H+EIGNK + AKVNG +V+  + 
Sbjct: 383 ESLKIDLFSDMVFVFTPKGDVMELPLGSVPIDFAYRVHSEIGNKTIGAKVNGKMVTLDYK 442

Query: 614 LANAEVVEIITYNVSF 629
           L   +++EI+T   S+
Sbjct: 443 LKTGDIIEILTSKHSY 458


>gi|421527317|ref|ZP_15973920.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
           [Fusobacterium nucleatum ChDC F128]
 gi|402256525|gb|EJU07004.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
           [Fusobacterium nucleatum ChDC F128]
          Length = 725

 Score =  348 bits (894), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 191/480 (39%), Positives = 295/480 (61%), Gaps = 55/480 (11%)

Query: 145 ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDT 204
           + + ++ AL  A E+H GQ R+SG+ +IIHPVEVA+IL ++++D ++I AGLLHD VEDT
Sbjct: 20  DFDKIKLALGFAEESHQGQYRKSGDDYIIHPVEVAKILMDMKMDTDTIVAGLLHDVVEDT 79

Query: 205 NVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEV 264
            ++    I+  FG TV  +V+G   V+KL  L    +N      +A+++R+M LAM E +
Sbjct: 80  -LIPIADIKYNFGDTVATLVDG---VTKLKALPNGTKN------QAENIRKMILAMAENI 129

Query: 265 RVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYT 324
           RVI++KLADRLHNMRTL  M P KQ SI+ ETL ++APLA  LGM +IKSELE+++F Y 
Sbjct: 130 RVILIKLADRLHNMRTLKFMKPEKQQSISKETLDIYAPLAHRLGMAKIKSELEDMAFSYL 189

Query: 325 NAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIY 384
           + +++ ++KR V +  +E +  +E   + +++ + D      + +K E++   K  YSIY
Sbjct: 190 HHDEFLEIKRLVDNTKEERKDYIENFIRTIIRTLSD------LGIKAEVKGRFKHFYSIY 243

Query: 385 KAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMK 444
           K + +     +++  +  +R+I+  K              CYHVLG+VH  +TP+P   K
Sbjct: 244 KKMYQKGKEFDDIYDLMGVRVIVDDKAT------------CYHVLGIVHSQYTPVPGRFK 291

Query: 445 DYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLV 504
           DYIA PK N YQS+HTT++  L +    +E+QIRT++MD IAE GIAAH++         
Sbjct: 292 DYIAVPKSNNYQSIHTTIVGPLGKF---IEIQIRTKDMDDIAEEGIAAHWN--------- 339

Query: 505 GHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSR 564
              + N +S +   +            WL  I E+Q E   + ++ +F++ +T D+    
Sbjct: 340 --YKENKKSSKDDNIY----------GWLRHIIEFQNE---SDSTEDFIEGVTGDIDRGT 384

Query: 565 VFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
           VF F+P+G+I  LP GAT +D+A+M+HT++G K V AKVNG +V+  H L + + VEIIT
Sbjct: 385 VFTFSPKGDIIELPVGATALDFAFMVHTQVGCKCVGAKVNGRMVTIDHKLKSGDKVEIIT 444


>gi|222529929|ref|YP_002573811.1| (p)ppGpp synthetase I SpoT/RelA [Caldicellulosiruptor bescii DSM
           6725]
 gi|222456776|gb|ACM61038.1| (p)ppGpp synthetase I, SpoT/RelA [Caldicellulosiruptor bescii DSM
           6725]
          Length = 726

 Score =  348 bits (894), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 201/508 (39%), Positives = 302/508 (59%), Gaps = 67/508 (13%)

Query: 125 DSPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
           D  ++L E +     Y S  ++ L+++A   A + HDGQ R SGEP+I+HP+EVA IL +
Sbjct: 4   DLSDKLNELIERVKKYASEEDINLIKKAFEFAQKHHDGQSRNSGEPYIVHPLEVALILAD 63

Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
           LELD  SI AGLLHD VEDT+  + E +E EFG  +  +V+G   V+KLGKL    E  S
Sbjct: 64  LELDIASIVAGLLHDVVEDTSA-SLEDVEREFGKEIAELVDG---VTKLGKL----EFTS 115

Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
             + +A++ R+M +AM +++RVI++KLADRLHNMRTL ++PP KQ   A ET+ ++APLA
Sbjct: 116 KLERQAENYRKMLIAMAKDIRVILIKLADRLHNMRTLKYLPPEKQRQKAQETIDIYAPLA 175

Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
             LG+ +IK ELE+LS  Y + E Y  +  ++A    E E+ +++   ++ +K+++    
Sbjct: 176 HRLGISKIKWELEDLSLRYLDPEGYYDLVEKIAKKRVEREEYIKKIISLISEKLKE---- 231

Query: 365 DLMTVKTEIRSVCKEP---YSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSP 421
                  E+  +   P   YSIY+ + +   ++ E+  +  +RII+            + 
Sbjct: 232 ----ANIEVGQIDGRPKHFYSIYRKMKEQGKTLEEIYDLFAIRIIV------------NS 275

Query: 422 QQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQ 476
            + CY VLG++H ++ P+P   KDYIA PKPN YQSLHTT+I     PF        EVQ
Sbjct: 276 VKDCYGVLGIIHTLFKPMPGRFKDYIAMPKPNMYQSLHTTVIGPEGEPF--------EVQ 327

Query: 477 IRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAI 536
           IRT +M   AE GIAAH+  +             GR        + + +   + +WL  +
Sbjct: 328 IRTFDMHRTAEYGIAAHWKYK------------EGR--------IKSTDEDEKFAWLREL 367

Query: 537 REWQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGN 596
            EWQ+E      ++EF++++  +L    VFVFTP+G++ +LP+G+T +D+AY IH+EIGN
Sbjct: 368 LEWQKEL---KDAKEFMESLKINLFSDEVFVFTPKGDVISLPQGSTPIDFAYAIHSEIGN 424

Query: 597 KMVAAKVNGNLVSPTHVLANAEVVEIIT 624
           KM  AKVNG LV   + L N ++VEIIT
Sbjct: 425 KMAGAKVNGKLVPIDYELKNGDIVEIIT 452


>gi|403070228|ref|ZP_10911560.1| GTP pyrophosphokinase [Oceanobacillus sp. Ndiop]
          Length = 733

 Score =  348 bits (894), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 199/492 (40%), Positives = 294/492 (59%), Gaps = 53/492 (10%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           YLS +++EL++ A   A EAH  Q R+SGEP+IIHPV+VA IL  LE+D E+IA G LHD
Sbjct: 19  YLSNDDVELIQHAYDFASEAHHDQFRKSGEPYIIHPVQVAGILANLEMDAETIAGGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            VEDT+V T E++E+EF   +  +V+G   V+KLGK++ + +       +A++ R+MF+A
Sbjct: 79  VVEDTDV-TLEKMEQEFNHEIAMLVDG---VTKLGKIRYETKEAQ----QAENHRKMFVA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M +++RVI++KLADRLHNMRTL H+   KQ  I+ ETL++FAPLA  LG+  IK ELE+ 
Sbjct: 131 MAKDIRVILIKLADRLHNMRTLKHLSSEKQRRISNETLEIFAPLAHRLGISTIKWELEDT 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDL--MTVKTEIRSVC 377
           +  Y N + Y     R+  L K+  +E E      +K++ D+  +DL  + ++ E+    
Sbjct: 191 ALRYLNPQQYY----RIVQLMKQKREERES----YIKEVIDELSVDLHEVNIEAEMSGRP 242

Query: 378 KEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWT 437
           K  YSIY+ ++      NE+  +  +RII+               + CY VLG++H  W 
Sbjct: 243 KHLYSIYQKMVLQNKQFNEIYDLLAVRIIV------------DSIKDCYAVLGIIHTNWK 290

Query: 438 PIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGR 497
           P+P   KDYIA PK N YQSLHTT+I    +    LEVQIRT+EM  IAE GIAAH++ +
Sbjct: 291 PMPGRFKDYIAMPKQNLYQSLHTTVIGPKGDP---LEVQIRTKEMHEIAEYGIAAHWAYK 347

Query: 498 VFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTIT 557
                             GK V     +   +++W   I +WQ +      + EF++++ 
Sbjct: 348 -----------------EGKQVKPGKKSFEEKLTWFREILDWQND---THDAEEFIESLK 387

Query: 558 RDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANA 617
            DL    V+VFTP+GE+  LP G+  +D+AY IHTEIGNK + AK+NG +    + L N 
Sbjct: 388 IDLFFDMVYVFTPKGEVIELPSGSIPLDFAYKIHTEIGNKTIGAKINGKMEPLDYKLQNG 447

Query: 618 EVVEIITYNVSF 629
           ++VE++T   S+
Sbjct: 448 DIVEVMTSKHSY 459


>gi|423483983|ref|ZP_17460673.1| GTP pyrophosphokinase [Bacillus cereus BAG6X1-2]
 gi|401141534|gb|EJQ49089.1| GTP pyrophosphokinase [Bacillus cereus BAG6X1-2]
          Length = 727

 Score =  348 bits (894), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 202/496 (40%), Positives = 291/496 (58%), Gaps = 50/496 (10%)

Query: 134 LRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIA 193
           L     YL+ +++ELV RA   A +AH  Q R+SGEP+IIHP++VA IL +L +D  +++
Sbjct: 13  LEKASQYLAVDDIELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDPATVS 72

Query: 194 AGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDL 253
           AG LHD VEDT + T E IE EF   +  +V+G   V+KLGK+K K+  H  Q  +A++ 
Sbjct: 73  AGFLHDVVEDTEI-TLEDIEREFNKEIAMLVDG---VTKLGKIKYKS--HEQQ--QAENH 124

Query: 254 RQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIK 313
           R+MF+AM +++RVI++KLADRLHNMRTL H+P  KQ  IA ETL++FAPLA  LG+  IK
Sbjct: 125 RKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGISTIK 184

Query: 314 SELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEI 373
            ELE+ S  Y N + Y     R+ +L K    E EE    +M  I +   L  + ++ EI
Sbjct: 185 WELEDTSLRYLNPQQYY----RIVNLMKRKRAEREEYLDEVMTGIREK--LKEVAIQPEI 238

Query: 374 RSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVH 433
               K  YSIY+ +       NE+  +  +R+++            +  + CY VLG++H
Sbjct: 239 SGRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVV------------NSIKDCYAVLGIIH 286

Query: 434 GIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAH 493
             W P+P   KDYIA PK N YQSLHTT+I    +    LEVQIRT+EM  IAE GIAAH
Sbjct: 287 TCWKPMPGRFKDYIAMPKANLYQSLHTTVIGPKGDP---LEVQIRTKEMHEIAEFGIAAH 343

Query: 494 YSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFV 553
           +            A   G++            +  +++W   I EWQ E      + EF+
Sbjct: 344 W------------AYKEGKAAE------TTGTLEKKLTWFRQILEWQNE---ASNAEEFM 382

Query: 554 DTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHV 613
           +++  DL    VFVFTP+G++  LP G+  +D+AY +H+EIGNK + AKVNG +V+  + 
Sbjct: 383 ESLKIDLFSDMVFVFTPKGDVMELPLGSVPIDFAYRVHSEIGNKTIGAKVNGKMVTLDYK 442

Query: 614 LANAEVVEIITYNVSF 629
           L   +++EI+T   S+
Sbjct: 443 LKTGDIIEILTSKHSY 458


>gi|333979510|ref|YP_004517455.1| (p)ppGpp synthetase I SpoT/RelA [Desulfotomaculum kuznetsovii DSM
           6115]
 gi|333822991|gb|AEG15654.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfotomaculum kuznetsovii DSM
           6115]
          Length = 724

 Score =  348 bits (894), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 200/495 (40%), Positives = 294/495 (59%), Gaps = 52/495 (10%)

Query: 130 LWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDW 189
           L E +   I Y    ++ L+ +A   A +AH  QKR SGEPFI HPV VA IL  L++D 
Sbjct: 11  LQELVHRVILYHPQADVALLSKAYRFAEQAHRDQKRISGEPFITHPVAVAHILANLQMDL 70

Query: 190 ESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVK 249
           +++ AGLLHD VEDT V T E I+  FG  V  +V+G TK+S+L       E  S ++ +
Sbjct: 71  QTLVAGLLHDVVEDTGV-TLEEIKTAFGDEVALLVDGVTKLSRL-------EYRSKEEHQ 122

Query: 250 ADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGM 309
           A++LR+MFLAM +++RVI++KLADRLHN+RTL +    KQ  IA ETL+++APLA  LG+
Sbjct: 123 AENLRKMFLAMAQDIRVILIKLADRLHNLRTLKYHTETKQKEIARETLEIYAPLAHRLGI 182

Query: 310 YQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTV 369
           Y +K ELE+LSF Y   E Y ++  RV+   ++ E+ +  A +IL +K+ +        +
Sbjct: 183 YHLKWELEDLSFRYLEPEKYYELAERVSRTRRKREEYIRTAIQILRRKLAE------AGI 236

Query: 370 KTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVL 429
             +I+   K  YSIY  + K +  ++E+  +  +R+I++              + CY VL
Sbjct: 237 FADIQGRPKHLYSIYTKMEKQQKDLSEIYDVMAVRVIVESI------------RDCYAVL 284

Query: 430 GLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERG 489
           G VH +W PIP   KDYIA PK N YQSLHTT++    E    LE+QIRT EM   AE G
Sbjct: 285 GTVHTLWKPIPGRFKDYIAMPKSNMYQSLHTTVVGPQGEP---LEIQIRTREMHRTAEYG 341

Query: 490 IAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTS 549
           IAAH+             +  G++ R         ++  +++WL  I EWQ E      +
Sbjct: 342 IAAHW-----------RYKEGGKTDR---------DLDQKLAWLRQILEWQREL---RDA 378

Query: 550 REFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVS 609
           REF++++  DL    VFVFTP+G++  LP G+  +D+AY +HTE+G++ V A+VNG +V 
Sbjct: 379 REFMESLKIDLFADSVFVFTPKGDVIELPAGSVPIDFAYRVHTEVGHRCVGARVNGRIVP 438

Query: 610 PTHVLANAEVVEIIT 624
             + L N ++VEI+T
Sbjct: 439 LDYQLKNGDIVEILT 453


>gi|319651680|ref|ZP_08005807.1| GTP pyrophosphokinase [Bacillus sp. 2_A_57_CT2]
 gi|317396747|gb|EFV77458.1| GTP pyrophosphokinase [Bacillus sp. 2_A_57_CT2]
          Length = 744

 Score =  348 bits (894), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 195/490 (39%), Positives = 295/490 (60%), Gaps = 50/490 (10%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           YL+    ELV++A   A  AH  Q R+SGEP+IIHP++VA IL +LE+D  ++AAG LHD
Sbjct: 32  YLNDEHAELVKKAYEFAKHAHREQYRKSGEPYIIHPIQVAGILADLEMDPSTVAAGFLHD 91

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            VEDT + + E IEE F + V  +V+G   V+KLGK+K K    S ++ +A++ R+MF+A
Sbjct: 92  VVEDTEI-SLENIEESFNSEVAMLVDG---VTKLGKIKYK----SQEEQQAENHRKMFVA 143

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M +++RVI++KLADRLHNMRTL H+P  KQ  I+ ETL++FAPLA  LG+ +IK ELE+ 
Sbjct: 144 MAQDIRVILIKLADRLHNMRTLKHLPAEKQRRISNETLEIFAPLAHRLGISKIKWELEDT 203

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           +  Y N + Y ++   +     E E+ L++   ++  ++ +      +++K+EI    K 
Sbjct: 204 ALRYLNPQQYYRIVNLMKKKRAEREEYLDDVINVMRGRLSE------VSIKSEISGRPKH 257

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIY+ +       NE+  +  +RI++            S  + CY VLG++H  W P+
Sbjct: 258 IYSIYRKMALQNKQFNEIYDLLAVRIVV------------SSIKDCYAVLGIIHTCWKPM 305

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK N YQSLHTT+I    +    LEVQIRT +M  IAE GIAAH++ +  
Sbjct: 306 PGRFKDYIAMPKQNMYQSLHTTVIGPKGDP---LEVQIRTMDMHRIAEFGIAAHWAYK-- 360

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
                           GK V    ++   +++W   I E+Q++      + EF++++  D
Sbjct: 361 ---------------EGKRVN-EGSSFEEKLTWFREILEFQDDAA---NAEEFMESLKID 401

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           L    VFVFTP+G++  LP G+  +D+AY IH+EIGNK + AKVNG +V+  + L   ++
Sbjct: 402 LFSDMVFVFTPKGDVIELPSGSVPIDFAYRIHSEIGNKTIGAKVNGKMVTLDYKLKTGDI 461

Query: 620 VEIITYNVSF 629
           +EI+T   S+
Sbjct: 462 IEILTSKHSY 471


>gi|423512518|ref|ZP_17489049.1| GTP pyrophosphokinase [Bacillus cereus HuA2-1]
 gi|402449489|gb|EJV81326.1| GTP pyrophosphokinase [Bacillus cereus HuA2-1]
          Length = 727

 Score =  348 bits (894), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 202/496 (40%), Positives = 292/496 (58%), Gaps = 50/496 (10%)

Query: 134 LRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIA 193
           L     YL+  ++ELV RA   A +AH  Q R+SGEP+IIHP++VA IL +L +D  +++
Sbjct: 13  LEKASQYLADGDIELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDPATVS 72

Query: 194 AGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDL 253
           AG LHD VEDT + T E IE EF   +  +V+G   V+KLGK+K K+  H  Q  +A++ 
Sbjct: 73  AGFLHDVVEDTEI-TLEDIEREFNKEIAMLVDG---VTKLGKIKYKS--HEQQ--QAENH 124

Query: 254 RQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIK 313
           R+MF+AM +++RVI++KLADRLHNMRTL H+P  KQ  IA ETL++FAPLA  LG+  IK
Sbjct: 125 RKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGISTIK 184

Query: 314 SELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEI 373
            ELE+ S  Y N + Y     R+ +L K    E EE    +M  I +   L  ++++ EI
Sbjct: 185 WELEDTSLRYLNPQQYY----RIVNLMKRKRAEREEYLDEVMTGIREK--LKEVSIQPEI 238

Query: 374 RSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVH 433
               K  YSIY+ +       NE+  +  +R+++            +  + CY VLG++H
Sbjct: 239 SGRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVV------------NSIKDCYAVLGIIH 286

Query: 434 GIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAH 493
             W P+P   KDYIA PK N YQSLHTT+I    +    LEVQIRT+EM  IAE GIAAH
Sbjct: 287 TCWKPMPGRFKDYIAMPKANLYQSLHTTVIGPKGDP---LEVQIRTKEMHEIAEFGIAAH 343

Query: 494 YSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFV 553
           ++ +                  GKT       +  +++W   I EWQ E      + EF+
Sbjct: 344 WAYK-----------------EGKT-AETTGTLEKKLTWFRQILEWQNE---ASNAEEFM 382

Query: 554 DTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHV 613
           +++  DL    VFVFTP+G++  LP G+  +D++Y +H+EIGNK + AKVNG +V+  + 
Sbjct: 383 ESLKIDLFSDMVFVFTPKGDVMELPLGSVPIDFSYRVHSEIGNKTIGAKVNGKMVTLDYK 442

Query: 614 LANAEVVEIITYNVSF 629
           L   +++EI+T   S+
Sbjct: 443 LKTGDIIEILTSKHSY 458


>gi|336421845|ref|ZP_08602000.1| hypothetical protein HMPREF0993_01377 [Lachnospiraceae bacterium
           5_1_57FAA]
 gi|336009694|gb|EGN39685.1| hypothetical protein HMPREF0993_01377 [Lachnospiraceae bacterium
           5_1_57FAA]
          Length = 781

 Score =  348 bits (894), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 202/514 (39%), Positives = 303/514 (58%), Gaps = 72/514 (14%)

Query: 125 DSPERLWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILG 183
           ++P+RL+E L   I    P+ ++ ++ +A  LA +AH GQ R+SGEP+I+HP+ VA IL 
Sbjct: 42  ENPDRLYEMLIARIRRYHPSTDVSMIEKAYQLAKKAHGGQCRKSGEPYIVHPLWVAIILA 101

Query: 184 ELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENH 243
           +LE+D E+I +G+LHD VEDT V + E I+ EFG  V  +V+G   V+KLG+L   ++  
Sbjct: 102 DLEMDKETIVSGMLHDVVEDTEV-SEEDIKREFGEEVALLVDG---VTKLGRLSYSSDKL 157

Query: 244 SVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPL 303
            VQ   A++LR+MFLAM +++RVII+KLADRLHNMRTL  M P KQ   A ET+ ++AP+
Sbjct: 158 EVQ---AENLRKMFLAMAKDIRVIIIKLADRLHNMRTLEFMTPAKQKEKAKETMDIYAPI 214

Query: 304 AKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQF 363
           A+ LG+ +IK+EL++L+  Y+  E +                  +  N+I  +K E ++F
Sbjct: 215 AQRLGISKIKTELDDLALKYSQPEVF-----------------FDLVNQINARKTEREEF 257

Query: 364 LDLM-----------TVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPC 412
           +  +           ++K ++    K  +SIYK ++    ++++V  +  +RII+     
Sbjct: 258 VQQIVDEVSTHMKNASIKADVNGRVKHFFSIYKKMVNQDKTVDQVYDLFAVRIIV----- 312

Query: 413 SGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFR 472
                     + CY  LG++H ++TPIP   KDYIA PKPN YQSLHTTL+  + +    
Sbjct: 313 -------DSVKDCYAALGVIHEMYTPIPGRFKDYIAMPKPNMYQSLHTTLMSSVGQP--- 362

Query: 473 LEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISW 532
            E+QIRT+EM   AE GIAAH+  +               S  GK      A    ++SW
Sbjct: 363 FEIQIRTQEMHKTAEYGIAAHWKYK--------------ESNDGKKSV--EAQEEEKLSW 406

Query: 533 LNAIREWQEEFVGNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMI 590
           L  I EWQ +   N   REF+  I    DL    V+ FTP+G++KNLP G+T +D+AY I
Sbjct: 407 LRQILEWQRDMSDN---REFLSLIKGDLDLFAEDVYCFTPQGDVKNLPNGSTPIDFAYAI 463

Query: 591 HTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
           H+ +GNKMV A+VNG LV+  + + N + +EI+T
Sbjct: 464 HSAVGNKMVGARVNGKLVNIEYKIQNGDRIEILT 497


>gi|403384230|ref|ZP_10926287.1| GTP pyrophosphokinase [Kurthia sp. JC30]
          Length = 730

 Score =  348 bits (894), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 201/491 (40%), Positives = 291/491 (59%), Gaps = 49/491 (9%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           SY++   ++ VRRA  LA EAH  Q R SGEP+I+HPV+VA IL +L++D E+++AG LH
Sbjct: 18  SYMNEEHVDFVRRAYELAREAHKEQFRSSGEPYIVHPVQVAGILADLQMDPETVSAGFLH 77

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT V T + + E+FG  V  +V+G   V+KLGK+K K    S ++ +A++ R+MF+
Sbjct: 78  DVVEDTEV-TRDDLVEQFGEEVAMLVDG---VTKLGKIKYK----SKKEQQAENHRKMFV 129

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM +++RVI++KLADRLHNMRTL H+P  KQ  I+ ETL++FAPLA  LG+  IK ELE+
Sbjct: 130 AMAQDIRVILIKLADRLHNMRTLKHLPVEKQRRISKETLEIFAPLAHRLGISAIKWELED 189

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
            +  Y N + Y     R+ +L K    E E   K +M +I     L  + ++ E+    K
Sbjct: 190 TALRYLNPQQYY----RIVNLMKRKRTEREAYLKNVMDEIHGQ--LGDVDIQAELSGRPK 243

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIYK +       NE+  +  +R+            L    + CY VLG+VH +W P
Sbjct: 244 HIYSIYKKMQSQHKQFNEIYDLLAIRV------------LVDSIKDCYAVLGIVHTLWKP 291

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PK N YQSLHTT+I    +    LEVQIRT EM  IAE G+AAH++ + 
Sbjct: 292 MPGRFKDYIAMPKQNLYQSLHTTVIGPYGDP---LEVQIRTNEMHNIAEYGVAAHWAYK- 347

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                            GK      ++I  +++W   I E+Q   V N  + EF++++  
Sbjct: 348 ----------------EGKNAATEKSDIDSKLTWFREILEFQS--VSN-DAEEFMESLKF 388

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           DL    V+VF+P+G++  LP G+  +D+AY +H+EIGN+ + AKVNG +V     L   +
Sbjct: 389 DLFSDMVYVFSPKGDVLELPAGSVPIDFAYRVHSEIGNRTIGAKVNGKMVPLDTPLETGD 448

Query: 619 VVEIITYNVSF 629
           +VE+IT   SF
Sbjct: 449 IVEVITSKQSF 459


>gi|194017102|ref|ZP_03055714.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp
           synthetase I) ((P)ppGpp synthetase) [Bacillus pumilus
           ATCC 7061]
 gi|194010970|gb|EDW20540.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp
           synthetase I) ((P)ppGpp synthetase) [Bacillus pumilus
           ATCC 7061]
          Length = 736

 Score =  348 bits (894), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 201/490 (41%), Positives = 289/490 (58%), Gaps = 47/490 (9%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           YLS   ++ + RA   A  AH  Q R+SGEP+IIHP++VA IL +LE+D  +IA G LHD
Sbjct: 19  YLSAEHIQFIERAYEYAENAHKEQYRKSGEPYIIHPIQVAGILVDLEMDPSTIAGGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            VEDT+V T + ++E F   V  +V+G   V+KLGK+K K    S ++ +A++ R+MF+A
Sbjct: 79  VVEDTDV-TLQDLKEHFNEEVAMLVDG---VTKLGKIKYK----SQEEQQAENHRKMFVA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M +++RVI++KLADRLHNMRTL H+P  KQ  I+ ETL++FAPLA  LG+ +IK ELE+ 
Sbjct: 131 MAQDIRVILIKLADRLHNMRTLKHLPQEKQRRISNETLEIFAPLAHRLGISKIKWELEDT 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           +  Y N + Y     R+ +L K    E EE    ++ +++D   +  + +K E     K 
Sbjct: 191 ALRYLNPQQYY----RIVNLMKRKRAEREEYLDEVVNEVKDR--VSEVNIKAEFSGRPKH 244

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIY+ ++      NE+  +  +RI            L    + CY VLG++H  W P+
Sbjct: 245 IYSIYRKMVLQNKQFNEIYDLLAVRI------------LVDSIKDCYAVLGIIHTCWKPM 292

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PKPN YQSLHTT+I    +    LEVQIRT EM  IAE GIAAH+     
Sbjct: 293 PGRFKDYIAMPKPNMYQSLHTTVIGPKGDP---LEVQIRTVEMHEIAEYGIAAHW----- 344

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
                  A   G+     T     A    ++SW   I E+Q E   +  + EF++++  D
Sbjct: 345 -------AYKEGKESAEST---EEAVFQKKLSWFREILEFQNE---STDAEEFMESLKID 391

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           L    VFVFTP+G++  LP G+  +D++Y IH+EIGNK + AKVNG +V+  H L   ++
Sbjct: 392 LFSDMVFVFTPKGDVIELPSGSVPIDFSYRIHSEIGNKTIGAKVNGKMVTLDHKLKTGDI 451

Query: 620 VEIITYNVSF 629
           +EI+T   S+
Sbjct: 452 IEILTSKHSY 461


>gi|374313164|ref|YP_005059594.1| (p)ppGpp synthetase I SpoT/RelA [Granulicella mallensis MP5ACTX8]
 gi|358755174|gb|AEU38564.1| (p)ppGpp synthetase I, SpoT/RelA [Granulicella mallensis MP5ACTX8]
          Length = 832

 Score =  348 bits (893), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 198/483 (40%), Positives = 280/483 (57%), Gaps = 56/483 (11%)

Query: 144 NELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVED 203
           ++L ++R A +   + H  QKR SGEP++IHP+EVA++L EL++D  +IAAGLLHD VED
Sbjct: 112 DDLAIIRSAWIFCMQQHATQKRASGEPYVIHPLEVAQVLAELKMDSTAIAAGLLHDAVED 171

Query: 204 TNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEE 263
           T+V T E I + FG  V  IVEG   V+KL K+K  N     +D +A+++R+M LAM  +
Sbjct: 172 TDV-TPEEIAKRFGEQVAHIVEG---VTKLDKIKFANR----EDHQAENIRKMLLAMVTD 223

Query: 264 VRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMY 323
           VRV+I+KLADRLHNMRTL H+ P KQ  IA ETL+++APLA  LGM +++ ELE+L+F Y
Sbjct: 224 VRVVIIKLADRLHNMRTLEHLKPEKQQRIARETLEIYAPLAHRLGMGKLRGELEDLAFRY 283

Query: 324 TNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSI 383
           T+   Y ++   V  L  E E  L      L  K+ +        +   + S  K  YSI
Sbjct: 284 TDPFQYTQLTTEVDSLRGEGEAFLHRIVSTLEAKLRE------ANINARVESRIKRLYSI 337

Query: 384 YKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAM 443
            + +   +  +++V  +  +R+I +             +Q CY  LGL+H  W P+P   
Sbjct: 338 QQKLTAHQIPVDQVYDLFAIRVITQ------------TEQDCYAALGLLHSTWRPVPGRF 385

Query: 444 KDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGL 503
           KD+IA P+PN YQSLHTTLI    E   + EVQIRTE+M  +AE GIAAH+         
Sbjct: 386 KDFIAMPRPNMYQSLHTTLIA---EGAHQFEVQIRTEDMHQVAEEGIAAHW--------- 433

Query: 504 VGHARPNGRSPRGKTVCLNNANIA--LRISWLNAIREWQEEFVGNMTSREFVDTITRDLL 561
                        K    +N + A   R++W+  + EWQ E        EF+ T+  DL 
Sbjct: 434 -------------KYKASDNVSAADEQRLAWVRQLMEWQREMT---DPNEFMSTLRIDLY 477

Query: 562 GSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVE 621
            + V+ FTP+G++  LPK  T VD+AY IHT++G+    AKVNG +V   H L N ++VE
Sbjct: 478 PAEVYTFTPKGKVIVLPKDGTPVDFAYAIHTDVGHTTTGAKVNGRIVPLRHKLRNGDIVE 537

Query: 622 IIT 624
           I T
Sbjct: 538 IST 540


>gi|157693164|ref|YP_001487626.1| GTP diphosphokinase [Bacillus pumilus SAFR-032]
 gi|157681922|gb|ABV63066.1| GTP diphosphokinase [Bacillus pumilus SAFR-032]
          Length = 736

 Score =  348 bits (893), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 201/490 (41%), Positives = 289/490 (58%), Gaps = 47/490 (9%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           YLS   ++ + RA   A  AH  Q R+SGEP+IIHP++VA IL +LE+D  +IA G LHD
Sbjct: 19  YLSAEHIQFIERAYEYAENAHKEQYRKSGEPYIIHPIQVAGILVDLEMDPSTIAGGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            VEDT+V T + ++E F   V  +V+G   V+KLGK+K K    S ++ +A++ R+MF+A
Sbjct: 79  VVEDTDV-TLQDLKEHFNEEVAMLVDG---VTKLGKIKYK----SQEEQQAENHRKMFVA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M +++RVI++KLADRLHNMRTL H+P  KQ  I+ ETL++FAPLA  LG+ +IK ELE+ 
Sbjct: 131 MAQDIRVILIKLADRLHNMRTLKHLPQEKQRRISNETLEIFAPLAHRLGISKIKWELEDT 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           +  Y N + Y     R+ +L K    E EE    ++ +++D   +  + +K E     K 
Sbjct: 191 ALRYLNPQQYY----RIVNLMKRKRAEREEYLDEVVNEVKDR--VSEVNIKAEFSGRPKH 244

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIY+ ++      NE+  +  +RI            L    + CY VLG++H  W P+
Sbjct: 245 IYSIYRKMVLQNKQFNEIYDLLAVRI------------LVDSIKDCYAVLGIIHTCWKPM 292

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PKPN YQSLHTT+I    +    LEVQIRT EM  IAE GIAAH+     
Sbjct: 293 PGRFKDYIAMPKPNMYQSLHTTVIGPKGDP---LEVQIRTVEMHEIAEYGIAAHW----- 344

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
                  A   G+     T     A    ++SW   I E+Q E   +  + EF++++  D
Sbjct: 345 -------AYKEGKESAEST---EEAVFQKKLSWFREILEFQNE---STDAEEFMESLKID 391

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           L    VFVFTP+G++  LP G+  +D++Y IH+EIGNK + AKVNG +V+  H L   ++
Sbjct: 392 LFSDMVFVFTPKGDVIELPSGSVPIDFSYRIHSEIGNKTIGAKVNGKMVTLDHKLKTGDI 451

Query: 620 VEIITYNVSF 629
           +EI+T   S+
Sbjct: 452 IEILTSKHSY 461


>gi|229076038|ref|ZP_04209009.1| GTP pyrophosphokinase [Bacillus cereus Rock4-18]
 gi|229098881|ref|ZP_04229817.1| GTP pyrophosphokinase [Bacillus cereus Rock3-29]
 gi|229105045|ref|ZP_04235697.1| GTP pyrophosphokinase [Bacillus cereus Rock3-28]
 gi|229117906|ref|ZP_04247268.1| GTP pyrophosphokinase [Bacillus cereus Rock1-3]
 gi|423377736|ref|ZP_17355020.1| GTP pyrophosphokinase [Bacillus cereus BAG1O-2]
 gi|423440844|ref|ZP_17417750.1| GTP pyrophosphokinase [Bacillus cereus BAG4X2-1]
 gi|423448988|ref|ZP_17425867.1| GTP pyrophosphokinase [Bacillus cereus BAG5O-1]
 gi|423463908|ref|ZP_17440676.1| GTP pyrophosphokinase [Bacillus cereus BAG6O-1]
 gi|423533272|ref|ZP_17509690.1| GTP pyrophosphokinase [Bacillus cereus HuB2-9]
 gi|423541473|ref|ZP_17517864.1| GTP pyrophosphokinase [Bacillus cereus HuB4-10]
 gi|423547709|ref|ZP_17524067.1| GTP pyrophosphokinase [Bacillus cereus HuB5-5]
 gi|423622506|ref|ZP_17598284.1| GTP pyrophosphokinase [Bacillus cereus VD148]
 gi|228665563|gb|EEL21043.1| GTP pyrophosphokinase [Bacillus cereus Rock1-3]
 gi|228678355|gb|EEL32580.1| GTP pyrophosphokinase [Bacillus cereus Rock3-28]
 gi|228684554|gb|EEL38496.1| GTP pyrophosphokinase [Bacillus cereus Rock3-29]
 gi|228707072|gb|EEL59274.1| GTP pyrophosphokinase [Bacillus cereus Rock4-18]
 gi|401129582|gb|EJQ37265.1| GTP pyrophosphokinase [Bacillus cereus BAG5O-1]
 gi|401172661|gb|EJQ79882.1| GTP pyrophosphokinase [Bacillus cereus HuB4-10]
 gi|401179430|gb|EJQ86603.1| GTP pyrophosphokinase [Bacillus cereus HuB5-5]
 gi|401260626|gb|EJR66794.1| GTP pyrophosphokinase [Bacillus cereus VD148]
 gi|401636002|gb|EJS53756.1| GTP pyrophosphokinase [Bacillus cereus BAG1O-2]
 gi|402417505|gb|EJV49805.1| GTP pyrophosphokinase [Bacillus cereus BAG4X2-1]
 gi|402420175|gb|EJV52446.1| GTP pyrophosphokinase [Bacillus cereus BAG6O-1]
 gi|402463491|gb|EJV95191.1| GTP pyrophosphokinase [Bacillus cereus HuB2-9]
          Length = 727

 Score =  348 bits (893), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 202/496 (40%), Positives = 292/496 (58%), Gaps = 50/496 (10%)

Query: 134 LRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIA 193
           L     YL+  ++ELV RA   A +AH  Q R+SGEP+IIHP++VA IL +L +D  +++
Sbjct: 13  LEKASQYLAVEDIELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDPATVS 72

Query: 194 AGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDL 253
           AG LHD VEDT + T E IE EF   +  +V+G   V+KLGK+K K+  H  Q  +A++ 
Sbjct: 73  AGFLHDVVEDTEI-TLEDIEREFNKEIAMLVDG---VTKLGKIKYKS--HEQQ--QAENH 124

Query: 254 RQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIK 313
           R+MF+AM +++RVI++KLADRLHNMRTL H+P  KQ  IA ETL++FAPLA  LG+  IK
Sbjct: 125 RKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGISTIK 184

Query: 314 SELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEI 373
            ELE+ S  Y N + Y     R+ +L K    E EE    +M  I +   L  ++++ EI
Sbjct: 185 WELEDTSLRYLNPQQYY----RIVNLMKRKRAEREEYLDEVMTGIREK--LKEVSIQPEI 238

Query: 374 RSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVH 433
               K  YSIY+ +       NE+  +  +R+++            +  + CY VLG++H
Sbjct: 239 SGRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVV------------NSIKDCYAVLGIIH 286

Query: 434 GIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAH 493
             W P+P   KDYIA PK N YQSLHTT+I    +    LEVQIRT+EM  IAE GIAAH
Sbjct: 287 TCWKPMPGRFKDYIAMPKANLYQSLHTTVIGPKGDP---LEVQIRTKEMHEIAEFGIAAH 343

Query: 494 YSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFV 553
           ++ +                  GKT       +  +++W   I EWQ E      + EF+
Sbjct: 344 WAYK-----------------EGKT-AETTGTLEKKLTWFRQILEWQNE---ASNAEEFM 382

Query: 554 DTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHV 613
           +++  DL    VFVFTP+G++  LP G+  +D++Y +H+EIGNK + AKVNG +V+  + 
Sbjct: 383 ESLKIDLFSDMVFVFTPKGDVMELPLGSVPIDFSYRVHSEIGNKTIGAKVNGKMVTLDYK 442

Query: 614 LANAEVVEIITYNVSF 629
           L   +++EI+T   S+
Sbjct: 443 LKTGDIIEILTSKHSY 458


>gi|229175081|ref|ZP_04302598.1| GTP pyrophosphokinase [Bacillus cereus MM3]
 gi|423457346|ref|ZP_17434143.1| GTP pyrophosphokinase [Bacillus cereus BAG5X2-1]
 gi|228608377|gb|EEK65682.1| GTP pyrophosphokinase [Bacillus cereus MM3]
 gi|401147730|gb|EJQ55223.1| GTP pyrophosphokinase [Bacillus cereus BAG5X2-1]
          Length = 727

 Score =  348 bits (893), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 202/496 (40%), Positives = 291/496 (58%), Gaps = 50/496 (10%)

Query: 134 LRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIA 193
           L     YL+  ++ELV RA   A +AH  Q R+SGEP+IIHP++VA IL +L +D  +++
Sbjct: 13  LEKASQYLADEDIELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDPATVS 72

Query: 194 AGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDL 253
           AG LHD VEDT + T E IE EF   +  +V+G   V+KLGK+K K+  H  Q  +A++ 
Sbjct: 73  AGFLHDVVEDTEI-TLEDIEREFNKEIAMLVDG---VTKLGKIKYKS--HEQQ--QAENH 124

Query: 254 RQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIK 313
           R+MF+AM +++RVI++KLADRLHNMRTL H+P  KQ  IA ETL++FAPLA  LG+  IK
Sbjct: 125 RKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGISTIK 184

Query: 314 SELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEI 373
            ELE+ S  Y N + Y     R+ +L K    E EE    +M  I +   L  + ++ EI
Sbjct: 185 WELEDTSLRYLNPQQYY----RIVNLMKRKRAEREEYLDEVMTGIREK--LKEVAIQPEI 238

Query: 374 RSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVH 433
               K  YSIY+ +       NE+  +  +R+++            +  + CY VLG++H
Sbjct: 239 SGRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVV------------NSIKDCYAVLGIIH 286

Query: 434 GIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAH 493
             W P+P   KDYIA PK N YQSLHTT+I    +    LEVQIRT+EM  IAE GIAAH
Sbjct: 287 TCWKPMPGRFKDYIAMPKANLYQSLHTTVIGPKGDP---LEVQIRTKEMHEIAEFGIAAH 343

Query: 494 YSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFV 553
           ++ +                  GKT       +  +++W   I EWQ E      + EF+
Sbjct: 344 WAYK-----------------EGKT-AETTGTLEKKLTWFRQILEWQNE---ASNAEEFM 382

Query: 554 DTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHV 613
           +++  DL    VFVFTP+G++  LP G+  +D++Y +H+EIGNK + AKVNG +V+  + 
Sbjct: 383 ESLKIDLFSDMVFVFTPKGDVMELPLGSVPIDFSYRVHSEIGNKTIGAKVNGKMVTLDYK 442

Query: 614 LANAEVVEIITYNVSF 629
           L   +++EI+T   S+
Sbjct: 443 LKTGDIIEILTSKHSY 458


>gi|291545648|emb|CBL18756.1| (p)ppGpp synthetase, RelA/SpoT family [Ruminococcus sp. SR1/5]
          Length = 774

 Score =  348 bits (893), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 204/507 (40%), Positives = 306/507 (60%), Gaps = 61/507 (12%)

Query: 126 SPERLWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
           SPE L+++L  ++    P+ ++ ++ +A  +A EAH  QKR+SGEP+IIHP+ VA IL +
Sbjct: 39  SPEVLYQELIKSVKKYHPSTDISMIEKAYKVASEAHKDQKRKSGEPYIIHPLCVAIILAD 98

Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
           LELD E+I AGLLHD VEDT  +T+E +E+EFG+ V  +V+G TK+ +L   K K E   
Sbjct: 99  LELDKETIVAGLLHDAVEDT-WMTYEEVEKEFGSEVALLVDGVTKLGQLSYSKDKVE--- 154

Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
              V+A++LR+MFLAM +++RVI++KLADRLHNMRTL +M P KQ   A ET+ ++AP+A
Sbjct: 155 ---VQAENLRKMFLAMAKDIRVILIKLADRLHNMRTLQYMRPEKQQEKARETMDIYAPIA 211

Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
             LG+ +IK EL++LS  Y   + Y  +  +VA L K   +E   +   ++K+++  Q +
Sbjct: 212 MRLGISKIKVELDDLSLKYLKPDVYYDLVEKVA-LRKSAREEFVNS---IVKQVK--QHM 265

Query: 365 DLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
           +   ++ ++    K  +SIYK ++    +I+++  +  +RII+               + 
Sbjct: 266 EDANIRAQVDGRVKHFFSIYKKMVNQDKTIDQIYDLFAVRIIV------------DTVKD 313

Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRT 479
           CY  LG++H ++ PIP   KDYIA PK N YQSLHTTLI     PF        E+QIRT
Sbjct: 314 CYAALGVIHEMYKPIPGRFKDYIAMPKANMYQSLHTTLIGPNGQPF--------EIQIRT 365

Query: 480 EEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREW 539
            EM   AE GIAAH+  +            +G+ P GK+          +++WL  I EW
Sbjct: 366 FEMHKTAEYGIAAHWKYK---------ETSDGKKP-GKSE-------EEKLNWLRQILEW 408

Query: 540 QEEFVGNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNK 597
           Q +   N   REF+  +    DL    V+ FTP+G++K LP G+T +D+AY +H+ +GNK
Sbjct: 409 QRDMSDN---REFMSLLKNDLDLFADSVYCFTPQGDVKTLPNGSTPIDFAYSVHSAVGNK 465

Query: 598 MVAAKVNGNLVSPTHVLANAEVVEIIT 624
           MV A+VNG LV   + + N + +EIIT
Sbjct: 466 MVGARVNGKLVPIEYKIKNGDRIEIIT 492


>gi|387929855|ref|ZP_10132532.1| GTP pyrophosphokinase RelA/SpoT [Bacillus methanolicus PB1]
 gi|387586673|gb|EIJ78997.1| GTP pyrophosphokinase RelA/SpoT [Bacillus methanolicus PB1]
          Length = 731

 Score =  348 bits (893), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 201/493 (40%), Positives = 298/493 (60%), Gaps = 50/493 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YL+   + LV +A   A  AH  Q R+SGEP+IIHP++VA IL +LE+D  ++AAG 
Sbjct: 16  TRKYLNEEHVNLVIKAYEFAKAAHSDQYRKSGEPYIIHPIQVAGILADLEMDPITVAAGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT+V T E + E F   V  +V+G   V+KLGK+K K    S ++ +A++ R+M
Sbjct: 76  LHDVVEDTDV-TLEEMREAFNDEVAMLVDG---VTKLGKIKYK----SHEEQQAENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
           F+AM +++RVI++KLADRLHNMRTL H+P  KQ  I+ ETL++FAPLA  LG+ +IK EL
Sbjct: 128 FVAMAQDIRVILIKLADRLHNMRTLKHLPLEKQRRISNETLEIFAPLAHRLGISKIKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+ +  Y N + Y     R+ +L K+   E E+    +++++ +   L+ +++K EI   
Sbjct: 188 EDTALRYLNPQQYY----RIVNLMKKKRAEREQYLDEVIEEVRNR--LNEVSIKAEISGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSIY+ +       NE+  +  +RI++            +  + CY VLG++H  W
Sbjct: 242 PKHIYSIYRKMALQNKQFNEIYDLLAVRIVV------------NSIKDCYAVLGIIHTCW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA PKPN YQSLHTT+I    +    LEVQIRT EM  IAE GIAAH++ 
Sbjct: 290 KPMPGRFKDYIAMPKPNMYQSLHTTVIGPKGDP---LEVQIRTFEMHRIAEYGIAAHWAY 346

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +                  GK+V   N++   +++W   I E+Q +      + EF++++
Sbjct: 347 K-----------------EGKSVK-ENSSFEDKLTWFREILEFQND---TANAEEFMESL 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             DL    VFVFTP+G++  LP G+  +D+AY IH+EIGNK + AKVNG +V+  + L  
Sbjct: 386 KIDLFSDMVFVFTPKGDVIELPAGSVPIDFAYRIHSEIGNKTIGAKVNGKMVTLDYKLKT 445

Query: 617 AEVVEIITYNVSF 629
            ++VEI+T   S+
Sbjct: 446 GDIVEILTSKHSY 458


>gi|357038708|ref|ZP_09100505.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfotomaculum gibsoniae DSM
           7213]
 gi|355359500|gb|EHG07262.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfotomaculum gibsoniae DSM
           7213]
          Length = 725

 Score =  348 bits (892), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 196/494 (39%), Positives = 292/494 (59%), Gaps = 53/494 (10%)

Query: 132 EDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWE 190
           ED+   +   +P+ +L+L++RA   A EAH GQKR SGEP+I HPV +  IL +LE+D +
Sbjct: 4   EDIIQKVILYNPDADLQLLKRAFAFANEAHAGQKRNSGEPYITHPVAITTILTDLEMDMD 63

Query: 191 SIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKA 250
           ++ AGLLHDTVEDT   T E IE+ FG  V ++V+G TK+S+L       E  S ++ + 
Sbjct: 64  TLVAGLLHDTVEDTGT-TLEDIEKYFGREVAQLVDGVTKLSRL-------EYRSKEERQV 115

Query: 251 DDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMY 310
           ++LR+MFLAM  ++RV+++KLADRLHNMRTL +   HKQ  IA ETL++FAPLA  LG+Y
Sbjct: 116 ENLRKMFLAMARDIRVVLIKLADRLHNMRTLQYHLEHKQREIALETLEIFAPLAHRLGIY 175

Query: 311 QIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVK 370
           ++K ELE+L+  ++N E Y ++   VA   ++ E+ +     +L KK+ +      + + 
Sbjct: 176 RLKWELEDLALRFSNPEKYYELADLVARTREKREEYIRSIISVLHKKMME------VKIN 229

Query: 371 TEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLG 430
            EI+   K  YSIY  + K +   N++  +  +R+            L    + CY VLG
Sbjct: 230 AEIQGRPKNLYSIYMKMQKQQLEFNQIYDVMAVRV------------LVDSVRDCYAVLG 277

Query: 431 LVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGI 490
            VH +W PIP   KDYIA PK N YQSLHTT++    +    LE+QIRT EM   +E GI
Sbjct: 278 TVHTLWVPIPGRFKDYIAMPKSNMYQSLHTTVVSPQGDP---LEIQIRTWEMHRTSEYGI 334

Query: 491 AAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSR 550
           AAH+                    R K     + +   ++SWL  I +WQ++      +R
Sbjct: 335 AAHW--------------------RYKEGGGKDGDFDRKLSWLRQILDWQKDL---KDAR 371

Query: 551 EFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSP 610
           EF++++  DL    VFVFTP+G++   P G+T +D+AY +HT++G+  V AKVN  +V  
Sbjct: 372 EFMESLKIDLFADVVFVFTPKGDVMEFPAGSTPLDFAYRVHTQVGHNCVGAKVNNKIVPL 431

Query: 611 THVLANAEVVEIIT 624
            + L N + VE++T
Sbjct: 432 DYTLKNGDRVEVLT 445


>gi|313891996|ref|ZP_07825597.1| GTP diphosphokinase [Dialister microaerophilus UPII 345-E]
 gi|313119639|gb|EFR42830.1| GTP diphosphokinase [Dialister microaerophilus UPII 345-E]
          Length = 783

 Score =  348 bits (892), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 198/501 (39%), Positives = 292/501 (58%), Gaps = 54/501 (10%)

Query: 124 EDSPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILG 183
           ED+ E+L   ++  I  L+ +++  +++A  LA +AH GQKR +GEP+I HP+ VA IL 
Sbjct: 59  EDAYEKLINRVKKYI--LNQDDINFIKKAFELANKAHSGQKRATGEPYIFHPLSVAYILS 116

Query: 184 ELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENH 243
           ELELD  +I A LLHD  EDT+  T E IE +FG  +  +V+G   V+KL + K KN+  
Sbjct: 117 ELELDRNAIVAALLHDVAEDTDT-TLEDIENQFGKEIAFLVDG---VTKLSQFKYKNK-- 170

Query: 244 SVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPL 303
             +D + ++ ++MFLAM E+VRV+I+KLADRLHNMRTL      K+  +A ET++++APL
Sbjct: 171 --EDQQLENFQKMFLAMAEDVRVVIIKLADRLHNMRTLWVFRKEKRQRVAKETIEIYAPL 228

Query: 304 AKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQF 363
           A  LG+Y IK ELE+L F Y   EDY  +  ++ +  +  E  +E+   +L +KI     
Sbjct: 229 AHRLGIYNIKWELEDLCFHYLYPEDYYDLVSQMREKRQVREAIVEDTMHVLKEKI----- 283

Query: 364 LDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQ 423
            D   +K  I    K  YSIYK + +    ++++  +  +R+I+   P            
Sbjct: 284 -DETNIKAVITGRPKHFYSIYKKMKRDNRELSQIYDLYAVRVIVDTIPQ----------- 331

Query: 424 ICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMD 483
            CY VLG+VH +W P+P+  KDYIA PKPN YQSLHTT+I    +    +E+QIRT EM 
Sbjct: 332 -CYAVLGIVHSLWKPLPKRFKDYIAVPKPNMYQSLHTTIIGTKGQP---VEIQIRTWEMH 387

Query: 484 LIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEF 543
            ++E GIAAH+                 R   G +   N+     +I WL  I EWQ+  
Sbjct: 388 HVSEYGIAAHW-----------------RYKEGNSN--NSQKFDSKIGWLRRILEWQD-- 426

Query: 544 VGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKV 603
                 +E ++ +  D+    VFVFTP+G++ NLPKG+T +D+AY IHT++GN  V AK+
Sbjct: 427 --TENPKELMNAVKLDVFSDEVFVFTPKGDVINLPKGSTSIDFAYRIHTDVGNHCVGAKI 484

Query: 604 NGNLVSPTHVLANAEVVEIIT 624
           N  +V     L N ++V I+T
Sbjct: 485 NNKIVPLETKLKNGDIVSIVT 505


>gi|312135681|ref|YP_004003019.1| (p)ppgpp synthetase i, spot/rela [Caldicellulosiruptor owensensis
           OL]
 gi|311775732|gb|ADQ05219.1| (p)ppGpp synthetase I, SpoT/RelA [Caldicellulosiruptor owensensis
           OL]
          Length = 726

 Score =  348 bits (892), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 201/505 (39%), Positives = 302/505 (59%), Gaps = 67/505 (13%)

Query: 128 ERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELEL 187
           +RL E +     Y+S  ++ L+++A   A + H+GQ R SGEP+I+HP+EVA IL +LEL
Sbjct: 7   DRLNELIEKVKKYVSEEDVNLIKKAFEFAQKHHEGQARSSGEPYIVHPLEVALILADLEL 66

Query: 188 DWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQD 247
           D  SI AGLLHD VEDT+  + E IE EFG  +  +V+G   V+KLGKL    E  S  +
Sbjct: 67  DIASIVAGLLHDVVEDTSA-SLEDIEREFGKEIAELVDG---VTKLGKL----EFTSKLE 118

Query: 248 VKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLL 307
            +A++ R+M +AM +++RVI++KLADRLHNMRTL ++PP KQ   A ET++++APLA  L
Sbjct: 119 RQAENYRKMLIAMAKDIRVILIKLADRLHNMRTLKYLPPEKQRQKAQETIEIYAPLAHRL 178

Query: 308 GMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLM 367
           G+ +IK ELE+LS  Y + E Y  +  ++A    E E+ ++    ++ +K+++       
Sbjct: 179 GISKIKWELEDLSLRYLDPEGYYDLVEKIAKKRVEREEYIKRIISLISEKLKE------- 231

Query: 368 TVKTEIRSVCKEP---YSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
               E+  +   P   YSIY+ + +   ++ E+  +  +RII+            +  + 
Sbjct: 232 -ANIEVGQIDGRPKHFYSIYRKMKEQGKTLEEIYDLFAIRIIV------------NSVKD 278

Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRT 479
           CY VLG++H ++ P+P   KDYIA PKPN YQSLHTT+I     PF        EVQIRT
Sbjct: 279 CYGVLGIIHTLFKPMPGRFKDYIAMPKPNMYQSLHTTVIGPEGEPF--------EVQIRT 330

Query: 480 EEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREW 539
            +M   AE GIAAH+  +             GR        + + +   + +WL  + EW
Sbjct: 331 FDMHRTAEYGIAAHWKYK------------EGR--------VKSTDEDEKFAWLRELLEW 370

Query: 540 QEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMV 599
           Q+E      ++EF++++  +L    VFVFTP+G++ +LP+G+T +D+AY IH+EIGNKM 
Sbjct: 371 QKEL---KDAKEFMESLKINLFSDEVFVFTPKGDVISLPQGSTPIDFAYAIHSEIGNKMA 427

Query: 600 AAKVNGNLVSPTHVLANAEVVEIIT 624
            AKVNG LV   + L N ++VEIIT
Sbjct: 428 GAKVNGKLVPIDYELKNGDIVEIIT 452


>gi|206969775|ref|ZP_03230729.1| GTP diphosphokinase [Bacillus cereus AH1134]
 gi|206735463|gb|EDZ52631.1| GTP diphosphokinase [Bacillus cereus AH1134]
          Length = 727

 Score =  348 bits (892), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 203/496 (40%), Positives = 290/496 (58%), Gaps = 50/496 (10%)

Query: 134 LRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIA 193
           L     YL   ++ELV RA   A +AH  Q R+SGEP+IIHP++VA IL +L +D  +++
Sbjct: 13  LEKASQYLVDEDIELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDPATVS 72

Query: 194 AGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDL 253
           AG LHD VEDT + T E IE EF   +  +V+G   V+KLGK+K K+  H  Q  +A++ 
Sbjct: 73  AGFLHDVVEDTEI-TLEDIEREFNKEIAMLVDG---VTKLGKIKYKS--HEQQ--QAENH 124

Query: 254 RQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIK 313
           R+MF+AM +++RVI++KLADRLHNMRTL H+P  KQ  IA ETL++FAPLA  LG+  IK
Sbjct: 125 RKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGISTIK 184

Query: 314 SELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEI 373
            ELE+ S  Y N + Y     R+ +L K    E EE    +M  I +   L  + ++ EI
Sbjct: 185 WELEDTSLRYLNPQQYY----RIVNLMKRKRAEREEYLDEVMTGIREK--LKEVAIQPEI 238

Query: 374 RSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVH 433
               K  YSIY+ +       NE+  +  +R+++            +  + CY VLG++H
Sbjct: 239 SGRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVV------------NSIKDCYAVLGIIH 286

Query: 434 GIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAH 493
             W P+P   KDYIA PK N YQSLHTT+I    +    LEVQIRT+EM  IAE GIAAH
Sbjct: 287 TCWKPMPGRFKDYIAMPKANLYQSLHTTVIGPKGDP---LEVQIRTKEMHEIAEFGIAAH 343

Query: 494 YSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFV 553
           ++ +                  GKT       +  +++W   I EWQ E      + EF+
Sbjct: 344 WAYK-----------------EGKT-AETTGTLEKKLTWFRQILEWQNE---ASNAEEFM 382

Query: 554 DTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHV 613
           +++  DL    VFVFTP+G++  LP G+  +D+AY +H+EIGNK + AKVNG +V+  + 
Sbjct: 383 ESLKIDLFSDMVFVFTPKGDVMELPLGSVPIDFAYRVHSEIGNKTIGAKVNGKMVTLDYK 442

Query: 614 LANAEVVEIITYNVSF 629
           L   +++EI+T   S+
Sbjct: 443 LKTGDIIEILTSKHSY 458


>gi|301055915|ref|YP_003794126.1| GTP diphosphokinase [Bacillus cereus biovar anthracis str. CI]
 gi|300378084|gb|ADK06988.1| GTP diphosphokinase [Bacillus cereus biovar anthracis str. CI]
          Length = 727

 Score =  348 bits (892), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 203/496 (40%), Positives = 290/496 (58%), Gaps = 50/496 (10%)

Query: 134 LRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIA 193
           L     YL   ++ELV RA   A +AH  Q R+SGEP+IIHP++VA IL +L +D  +++
Sbjct: 13  LEKASQYLVDEDIELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDPATVS 72

Query: 194 AGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDL 253
           AG LHD VEDT + T E IE EF   +  +V+G   V+KLGK+K K+  H  Q  +A++ 
Sbjct: 73  AGFLHDVVEDTEI-TLEDIEREFNKEIAMLVDG---VTKLGKIKYKS--HEQQ--QAENH 124

Query: 254 RQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIK 313
           R+MF+AM +++RVI++KLADRLHNMRTL H+P  KQ  IA ETL++FAPLA  LG+  IK
Sbjct: 125 RKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGISTIK 184

Query: 314 SELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEI 373
            ELE+ S  Y N + Y     R+ +L K    E EE    +M  I +   LD + ++ EI
Sbjct: 185 WELEDTSLRYLNPQQYY----RIVNLMKRKRAEREEYLDEVMTGIREK--LDEVAIQPEI 238

Query: 374 RSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVH 433
               K  YSIY+ +       NE+  +  +R+++            +  + CY VLG++H
Sbjct: 239 SGRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVV------------NSIKDCYAVLGIIH 286

Query: 434 GIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAH 493
             W P+P   KDYIA PK N YQSLHTT+I    +    LEVQIRT+EM  IAE GIAAH
Sbjct: 287 TCWKPMPGRFKDYIAMPKANLYQSLHTTVIGPKGDP---LEVQIRTKEMHEIAEFGIAAH 343

Query: 494 YSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFV 553
           ++ +                  GKT       +  +++W   I EWQ E      + EF+
Sbjct: 344 WAYK-----------------EGKT-AETTGTLEKKLTWFRQILEWQNE---ASNAEEFM 382

Query: 554 DTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHV 613
           +++  DL    VFVFTP+G++  LP G+  +D+AY +H+EIGNK + AKVN  +V+  + 
Sbjct: 383 ESLKIDLFSDMVFVFTPKGDVMELPLGSVPIDFAYRVHSEIGNKTIGAKVNEKMVTLDYK 442

Query: 614 LANAEVVEIITYNVSF 629
           L   +++EI+T   S+
Sbjct: 443 LKTGDIIEILTSKHSY 458


>gi|228954691|ref|ZP_04116714.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar kurstaki str.
           T03a001]
 gi|229071915|ref|ZP_04205126.1| GTP pyrophosphokinase [Bacillus cereus F65185]
 gi|229081671|ref|ZP_04214166.1| GTP pyrophosphokinase [Bacillus cereus Rock4-2]
 gi|229180683|ref|ZP_04308023.1| GTP pyrophosphokinase [Bacillus cereus 172560W]
 gi|365158800|ref|ZP_09354991.1| GTP pyrophosphokinase [Bacillus sp. 7_6_55CFAA_CT2]
 gi|423411798|ref|ZP_17388918.1| GTP pyrophosphokinase [Bacillus cereus BAG3O-2]
 gi|423426539|ref|ZP_17403570.1| GTP pyrophosphokinase [Bacillus cereus BAG3X2-2]
 gi|423432416|ref|ZP_17409420.1| GTP pyrophosphokinase [Bacillus cereus BAG4O-1]
 gi|423437851|ref|ZP_17414832.1| GTP pyrophosphokinase [Bacillus cereus BAG4X12-1]
 gi|423502906|ref|ZP_17479498.1| GTP pyrophosphokinase [Bacillus cereus HD73]
 gi|449091374|ref|YP_007423815.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar kurstaki str.
           HD73]
 gi|228602828|gb|EEK60309.1| GTP pyrophosphokinase [Bacillus cereus 172560W]
 gi|228701675|gb|EEL54166.1| GTP pyrophosphokinase [Bacillus cereus Rock4-2]
 gi|228711211|gb|EEL63175.1| GTP pyrophosphokinase [Bacillus cereus F65185]
 gi|228805018|gb|EEM51614.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar kurstaki str.
           T03a001]
 gi|363626294|gb|EHL77285.1| GTP pyrophosphokinase [Bacillus sp. 7_6_55CFAA_CT2]
 gi|401103866|gb|EJQ11843.1| GTP pyrophosphokinase [Bacillus cereus BAG3O-2]
 gi|401111286|gb|EJQ19185.1| GTP pyrophosphokinase [Bacillus cereus BAG3X2-2]
 gi|401117172|gb|EJQ25010.1| GTP pyrophosphokinase [Bacillus cereus BAG4O-1]
 gi|401121006|gb|EJQ28802.1| GTP pyrophosphokinase [Bacillus cereus BAG4X12-1]
 gi|402459127|gb|EJV90864.1| GTP pyrophosphokinase [Bacillus cereus HD73]
 gi|449025131|gb|AGE80294.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar kurstaki str.
           HD73]
          Length = 727

 Score =  348 bits (892), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 203/496 (40%), Positives = 290/496 (58%), Gaps = 50/496 (10%)

Query: 134 LRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIA 193
           L     YL   ++ELV RA   A +AH  Q R+SGEP+IIHP++VA IL +L +D  +++
Sbjct: 13  LEKASQYLVDEDIELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDPATVS 72

Query: 194 AGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDL 253
           AG LHD VEDT + T E IE EF   +  +V+G   V+KLGK+K K+  H  Q  +A++ 
Sbjct: 73  AGFLHDVVEDTEI-TLEDIEREFNKEIAMLVDG---VTKLGKIKYKS--HEQQ--QAENH 124

Query: 254 RQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIK 313
           R+MF+AM +++RVI++KLADRLHNMRTL H+P  KQ  IA ETL++FAPLA  LG+  IK
Sbjct: 125 RKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGISTIK 184

Query: 314 SELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEI 373
            ELE+ S  Y N + Y     R+ +L K    E EE    +M  I +   L  + ++ EI
Sbjct: 185 WELEDTSLRYLNPQQYY----RIVNLMKRKRAEREEYLDEVMTGIREK--LKEVAIQPEI 238

Query: 374 RSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVH 433
               K  YSIY+ +       NE+  +  +R+++            +  + CY VLG++H
Sbjct: 239 SGRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVV------------NSIKDCYAVLGIIH 286

Query: 434 GIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAH 493
             W P+P   KDYIA PK N YQSLHTT+I    +    LEVQIRT+EM  IAE GIAAH
Sbjct: 287 TCWKPMPGRFKDYIAMPKANLYQSLHTTVIGPKGDP---LEVQIRTKEMHEIAEFGIAAH 343

Query: 494 YSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFV 553
           ++ +                  GKT       +  +++W   I EWQ E      + EF+
Sbjct: 344 WAYK-----------------EGKT-AETTGTLEKKLTWFRQILEWQNE---ASNAEEFM 382

Query: 554 DTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHV 613
           +++  DL    VFVFTP+G++  LP G+  +D+AY +H+EIGNK + AKVNG +V+  + 
Sbjct: 383 ESLKIDLFSDMVFVFTPKGDVMELPLGSVPIDFAYRVHSEIGNKTIGAKVNGKMVTLDYK 442

Query: 614 LANAEVVEIITYNVSF 629
           L   +++EI+T   S+
Sbjct: 443 LKTGDIIEILTSKHSY 458


>gi|304316999|ref|YP_003852144.1| (p)ppGpp synthetase I SpoT/RelA [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302778501|gb|ADL69060.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 718

 Score =  348 bits (892), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 197/488 (40%), Positives = 296/488 (60%), Gaps = 62/488 (12%)

Query: 142 SPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTV 201
           S N++ L+ +A   A +AH+GQ R SGEP+I+HPVEVA IL  LELD  +IA+GLLHD +
Sbjct: 15  SENDINLIFKAYDYALKAHEGQYRNSGEPYIVHPVEVAMILTNLELDVSTIASGLLHDVI 74

Query: 202 EDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMT 261
           EDT++ T++ I+ EFG  +  +V+G   V+KLG ++ K    S  + +A+++R+M +AM 
Sbjct: 75  EDTSI-TYDDIKNEFGQEIADLVDG---VTKLGMIEYK----SKVEQQAENMRKMLIAMA 126

Query: 262 EEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSF 321
           +++RVI++KLADRLHNMRTL ++   KQ   A ETL+++AP+A  LGM  IK ELE+LS 
Sbjct: 127 KDIRVIMIKLADRLHNMRTLKYLSEEKQKEKAQETLEIYAPIAHRLGMSMIKWELEDLSL 186

Query: 322 MYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPY 381
            Y + +DY  +  +VA   KE E+ ++E    L+ K+++   L+ + +K E+    K  Y
Sbjct: 187 RYLHPDDYYSLVEKVAKKRKEREESIKE----LIDKLKEK--LNEIGIKAEVDGRPKHFY 240

Query: 382 SIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPR 441
           SIYK + +   +  ++  +  +R+I+            +  + CY  LG VH +W P+P 
Sbjct: 241 SIYKKMKQQNKTFEQIYDLMAVRVIV------------NTVKDCYGTLGAVHTLWKPMPG 288

Query: 442 AMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
             KDYIA PKPN YQSLHTT+I     PF        E+QIRT +M   AE GIAAH+  
Sbjct: 289 RFKDYIAMPKPNMYQSLHTTVIGPKGEPF--------EIQIRTWDMHRTAEYGIAAHW-- 338

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
                          +   GK+          ++SWL  + EWQ E      ++EF++T+
Sbjct: 339 ---------------KYKEGKSY---EDEFDAKLSWLRQLLEWQREL---KDAKEFMETL 377

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             DL    V+VFTP+G++ +LP G+T +D+AY IHTEIG+++  AKVNG +V   + L N
Sbjct: 378 KIDLFTDEVYVFTPKGDVISLPAGSTPIDFAYSIHTEIGHRLNGAKVNGKIVPIDYELKN 437

Query: 617 AEVVEIIT 624
            ++VEI+T
Sbjct: 438 GDIVEILT 445


>gi|295108479|emb|CBL22432.1| (p)ppGpp synthetase, RelA/SpoT family [Ruminococcus obeum A2-162]
          Length = 789

 Score =  348 bits (892), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 206/507 (40%), Positives = 304/507 (59%), Gaps = 60/507 (11%)

Query: 126 SPERLWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
           SPE L+++L  ++    P+ ++ ++++A  +A +AH  QKR+SGEP+IIHP+ VA IL +
Sbjct: 54  SPEVLYQELITSVRKYHPSTDITMIQKAYEVASDAHKDQKRKSGEPYIIHPLCVAIILAD 113

Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
           LELD E+I AGLLHD VEDT + T E +E+EF A V  +V+G   V+KLG+L    +   
Sbjct: 114 LELDKETIVAGLLHDAVEDTWMTT-EEVEKEFSAEVALLVDG---VTKLGQLSYSADKVE 169

Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
           +Q   A++LR+MFLAM +++RVI++KLADRLHNMRTL +M P KQ   A ET+ ++AP+A
Sbjct: 170 LQ---AENLRKMFLAMAKDIRVILIKLADRLHNMRTLQYMRPEKQQEKARETMDIYAPIA 226

Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
             LG+ +IK EL++LS  Y   + Y  +  +VA L K   +E    N I+ K+++  Q +
Sbjct: 227 MRLGISKIKVELDDLSLKYLKPDVYYDLVNKVA-LRKSERQEF--VNNIV-KQVK--QHM 280

Query: 365 DLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
           D   +K ++    K  +SIYK ++    +I+++  +  +RI            L    + 
Sbjct: 281 DEAAIKAQVDGRIKHFFSIYKKMVNQDKTIDQIYDLFAVRI------------LVDTVKD 328

Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRT 479
           CY  LG++H ++ PIP   KDYIA PKPN YQSLHTTLI     PF        E+QIRT
Sbjct: 329 CYAALGVIHEMYKPIPGRFKDYIAMPKPNMYQSLHTTLIGPNGQPF--------EIQIRT 380

Query: 480 EEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREW 539
            EM   AE GIAAH+  +            +G+ P  K           +++WL  I EW
Sbjct: 381 FEMHKTAEYGIAAHWKYK---------ESSDGKVPVDKRE-------EEKLNWLRQILEW 424

Query: 540 QEEFVGNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNK 597
           Q +   N   REF+  +    DL    V+ FTP+G++KNLP G+T +D+AY +H+ +GN+
Sbjct: 425 QRDMSDN---REFMSLLKNDLDLFADSVYCFTPQGDVKNLPNGSTPIDFAYSVHSAVGNR 481

Query: 598 MVAAKVNGNLVSPTHVLANAEVVEIIT 624
           MV A+VNG LV   + + N + +EIIT
Sbjct: 482 MVGARVNGKLVPIEYQIKNGDRIEIIT 508


>gi|452202850|ref|YP_007482983.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Dehalococcoides
           mccartyi DCMB5]
 gi|452109909|gb|AGG05641.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Dehalococcoides
           mccartyi DCMB5]
          Length = 728

 Score =  348 bits (892), Expect = 7e-93,   Method: Compositional matrix adjust.
 Identities = 202/502 (40%), Positives = 294/502 (58%), Gaps = 57/502 (11%)

Query: 133 DLRPTIS-YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
           DL+   S YL P +L L+  A   A  AH GQ R+SGEPFI HP+ VA  L +L+LD  +
Sbjct: 5   DLKEKASKYLPPEKLTLLEEAYNYAAAAHAGQMRKSGEPFIEHPLNVAMTLADLQLDAAT 64

Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLG------KLKCKNENHSV 245
           ++A LLHD  ED N+ + E+I+++FGA V ++V+G TK+SKL         +    N S+
Sbjct: 65  LSAALLHDVPEDANI-SLEQIDKKFGADVAKLVDGVTKLSKLALGPAIEDARRPGGNASL 123

Query: 246 QDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAK 305
           +  +A++LR+M +AM E++RV+ +KLADR HNMRTL  + P K+ SIA ET++++APLA 
Sbjct: 124 R--QAENLRKMLVAMAEDLRVVFIKLADRFHNMRTLQALSPEKRRSIAKETMEIYAPLAH 181

Query: 306 LLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLD 365
            LG++++K +LE+L+F Y +   Y +V   V     + +  LE  + IL  + + +    
Sbjct: 182 RLGIWELKWQLEDLAFRYLDPRHYRQVANLVDSKLAQRQNYLEHVSAILQGEFKKN---- 237

Query: 366 LMTVKTEIRSVCKEPYSIYKAVLK--SRG-SINEVNQIAQLRIIIKPKPCSGVGPLCSPQ 422
              +  E+    K  YSIY+ + K  S+G    ++  +  LR+++   P           
Sbjct: 238 --GLNVEVSGRPKHLYSIYQKMEKYASQGKQFEDIYDVLALRVLVNDIPD---------- 285

Query: 423 QICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEM 482
             CYH +G+VH +W PIP A  DYIA PKPNGYQSLHT ++         LEVQ+RT +M
Sbjct: 286 --CYHAVGIVHSLWHPIPGAFDDYIANPKPNGYQSLHTAVMSL---GTTPLEVQVRTYQM 340

Query: 483 DLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEE 542
             IAE G+AAH+                    R KT    + N   RI WL  + EW  +
Sbjct: 341 HHIAEYGVAAHW--------------------RYKTAGKEDVNFEDRIGWLRQLIEWHRD 380

Query: 543 FVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAK 602
             G   + EF++++  D+   +VFVFTP+GEIK+L KGAT +D+AY IHTE+GN+ + AK
Sbjct: 381 MRG---AEEFLESVKTDIFNDQVFVFTPKGEIKDLAKGATPIDFAYRIHTELGNRCIGAK 437

Query: 603 VNGNLVSPTHVLANAEVVEIIT 624
            NG LV   + L N EVVEI+T
Sbjct: 438 ANGRLVPLDYQLKNGEVVEIVT 459


>gi|229163355|ref|ZP_04291307.1| GTP pyrophosphokinase [Bacillus cereus R309803]
 gi|228620136|gb|EEK77010.1| GTP pyrophosphokinase [Bacillus cereus R309803]
          Length = 727

 Score =  348 bits (892), Expect = 7e-93,   Method: Compositional matrix adjust.
 Identities = 203/496 (40%), Positives = 290/496 (58%), Gaps = 50/496 (10%)

Query: 134 LRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIA 193
           L     YL+  ++ELV RA   A +AH  Q R+SGEP+IIHP++VA IL +L +D  +++
Sbjct: 13  LEKASQYLANEDIELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDPATVS 72

Query: 194 AGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDL 253
           AG LHD VEDT V T E IE EF   +  +V+G   V+KLGK+K K+  H  Q  +A++ 
Sbjct: 73  AGFLHDVVEDTEV-TLEDIEREFNKEIAMLVDG---VTKLGKIKYKS--HEQQ--QAENH 124

Query: 254 RQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIK 313
           R+MF+AM +++RVI++KLADRLHNMRTL H+P  KQ  IA ETL++FAPLA  LG+  IK
Sbjct: 125 RKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGINTIK 184

Query: 314 SELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEI 373
            ELE+ S  Y N + Y     R+ +L K    E EE    +M  I +   L  + ++ EI
Sbjct: 185 WELEDTSLRYLNPQQYY----RIVNLMKRKRAEREEYLDEVMTGIREK--LKEVAIQPEI 238

Query: 374 RSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVH 433
               K  YSIY+ +       NE+  +  +R+++            +  + CY VLG++H
Sbjct: 239 SGRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVV------------NSIKDCYAVLGIIH 286

Query: 434 GIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAH 493
             W P+P   KDYIA PK N YQSLHTT+I    +    LEVQIRT+EM  IAE GIAAH
Sbjct: 287 TCWKPMPGRFKDYIAMPKANLYQSLHTTVIGPKGDP---LEVQIRTKEMHEIAEFGIAAH 343

Query: 494 YSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFV 553
           +            A   G++            +  +++W   I EWQ E      + EF+
Sbjct: 344 W------------AYKEGKAAE------TTGTLEKKLTWFRQILEWQNE---ASNAEEFM 382

Query: 554 DTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHV 613
           +++  DL    VFVFTP+G++  LP G+  +D+AY +H+EIGNK + AKVNG +V+  + 
Sbjct: 383 ESLKIDLFSDMVFVFTPKGDVMELPLGSVPIDFAYRVHSEIGNKTIGAKVNGKMVTLDYK 442

Query: 614 LANAEVVEIITYNVSF 629
           L   +++EI+T   S+
Sbjct: 443 LKTGDIIEILTSKHSY 458


>gi|30264477|ref|NP_846854.1| GTP pyrophosphokinase [Bacillus anthracis str. Ames]
 gi|30259135|gb|AAP28340.1| GTP diphosphokinase [Bacillus anthracis str. Ames]
          Length = 727

 Score =  348 bits (892), Expect = 7e-93,   Method: Compositional matrix adjust.
 Identities = 202/496 (40%), Positives = 291/496 (58%), Gaps = 50/496 (10%)

Query: 134 LRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIA 193
           L     YL   ++ELV RA   A +AH  Q R+SGEP+IIHP++VA +L +L +D  +++
Sbjct: 13  LEKASQYLVDEDIELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGVLVDLHMDPATVS 72

Query: 194 AGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDL 253
           AG LHD VEDT + T E IE EF   +  +V+G   V+KLGK+K K+  H  Q  +A++ 
Sbjct: 73  AGFLHDVVEDTEI-TLEDIEREFNKEIAMLVDG---VTKLGKIKYKS--HEQQ--QAENH 124

Query: 254 RQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIK 313
           R+MF+AM +++RVI++KLADRLHNMRTL H+P  KQ  IA ETL++FAPLA  LG+  IK
Sbjct: 125 RKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGISTIK 184

Query: 314 SELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEI 373
            ELE+ S  Y N + Y     R+ +L K    E EE    +M  I +   LD + ++ EI
Sbjct: 185 WELEDTSLRYLNPQQYY----RIVNLMKRKRAEREEYLDEVMTGIREK--LDEVAIQPEI 238

Query: 374 RSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVH 433
               K  YSIY+ +       NE+  +  +R+++            +  + CY VLG++H
Sbjct: 239 SGRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVV------------NSIKDCYAVLGIIH 286

Query: 434 GIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAH 493
             W P+P   KDYIA PK N YQSLHTT+I    +    LEVQIRT+EM  IAE GIAAH
Sbjct: 287 TCWKPMPGRFKDYIAMPKANLYQSLHTTVIGPKGDP---LEVQIRTKEMHEIAEFGIAAH 343

Query: 494 YSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFV 553
           ++ +                  GKT       +  +++W   I EWQ E      + EF+
Sbjct: 344 WAYK-----------------EGKT-AETTGTLEKKLTWFRQILEWQNE---ASNAEEFM 382

Query: 554 DTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHV 613
           +++  DL    VFVFTP+G++  LP G+  +D+AY +++EIGNK + AKVNG +V+  + 
Sbjct: 383 ESLKIDLFSDMVFVFTPKGDVMELPLGSVPIDFAYRVYSEIGNKTIGAKVNGKMVTLDYK 442

Query: 614 LANAEVVEIITYNVSF 629
           L   +++EI+T   S+
Sbjct: 443 LKTGDIIEILTSKHSY 458


>gi|340753531|ref|ZP_08690310.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
           [Fusobacterium sp. 2_1_31]
 gi|422316887|ref|ZP_16398262.1| RelA/SpoT family protein [Fusobacterium periodonticum D10]
 gi|229423101|gb|EEO38148.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
           [Fusobacterium sp. 2_1_31]
 gi|404590479|gb|EKA92877.1| RelA/SpoT family protein [Fusobacterium periodonticum D10]
          Length = 725

 Score =  348 bits (892), Expect = 7e-93,   Method: Compositional matrix adjust.
 Identities = 195/496 (39%), Positives = 302/496 (60%), Gaps = 58/496 (11%)

Query: 131 WEDL--RPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
           WE L  +   ++L+  + + ++ AL  A E+H GQ R+SG+ +IIHPVEVA+IL ++++D
Sbjct: 5   WEQLLEKAKANHLNY-DFDKLKLALAFAEESHQGQYRKSGDDYIIHPVEVAKILMDMKMD 63

Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
            +++ AGLLHD VEDT ++    I+  FG TV  +V+G TK+  L     KN+       
Sbjct: 64  TDTVVAGLLHDVVEDT-LIPIADIKYNFGDTVAVLVDGVTKLKALPN-GTKNQ------- 114

Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
            A+++R+M LAM E +RVI++KLADRLHNMRTL  M P KQ +I+ ETL ++APLA  LG
Sbjct: 115 -AENIRKMILAMAENIRVILIKLADRLHNMRTLKFMKPEKQQAISKETLDIYAPLAHRLG 173

Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
           M +IKSELE+LSF Y + E+Y ++KR V +  +E +  +E   + + + + D      + 
Sbjct: 174 MAKIKSELEDLSFSYLHHEEYLEIKRLVENTKEERKDYIENFIRTMKRTLVD------LG 227

Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
           +K E++   K  YSIYK + +     +++  +  +R+I++ K              CYH+
Sbjct: 228 LKAEVKGRFKHFYSIYKKMYQKGKEFDDIYDLMGVRVIVEDKAA------------CYHI 275

Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAER 488
           LG+VH  +TP+P   KDYIA PK N YQS+HTT++  L +    +E+QIRT++MD IAE 
Sbjct: 276 LGIVHSQYTPVPGRFKDYIAVPKSNNYQSIHTTIVGPLGKF---IEIQIRTKDMDDIAEE 332

Query: 489 GIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMT 548
           GIAAH++            + N +S +   +            WL  I E+Q E   + +
Sbjct: 333 GIAAHWN-----------YKENKKSSKDDNIY----------GWLRHIIEFQNE---SDS 368

Query: 549 SREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLV 608
           + +F++ +T D+    +F F+P+G+I  LP GAT +D+A+M+HT++G K V AKVNG +V
Sbjct: 369 TEDFIEGVTGDIDKGTIFTFSPKGDIIELPVGATALDFAFMVHTQVGCKCVGAKVNGRMV 428

Query: 609 SPTHVLANAEVVEIIT 624
           +  H L + + VEIIT
Sbjct: 429 TIDHKLRSGDKVEIIT 444


>gi|167758796|ref|ZP_02430923.1| hypothetical protein CLOSCI_01138 [Clostridium scindens ATCC 35704]
 gi|167663536|gb|EDS07666.1| RelA/SpoT family protein [Clostridium scindens ATCC 35704]
          Length = 781

 Score =  348 bits (892), Expect = 7e-93,   Method: Compositional matrix adjust.
 Identities = 202/514 (39%), Positives = 302/514 (58%), Gaps = 72/514 (14%)

Query: 125 DSPERLWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILG 183
           ++P+RL+E L   I    P+ ++ ++ +A  LA +AH GQ R+SGEP+I+HP+ VA IL 
Sbjct: 42  ENPDRLYEMLIARIRRYHPSTDVSMIEKAYQLAKKAHGGQCRKSGEPYIVHPLWVAIILA 101

Query: 184 ELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENH 243
           +LE+D E+I +G+LHD VEDT V   E I+ EFG  V  +V+G   V+KLG+L   ++  
Sbjct: 102 DLEMDKETIVSGMLHDVVEDTEVGE-EDIKREFGEEVALLVDG---VTKLGRLSYSSDKL 157

Query: 244 SVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPL 303
            VQ   A++LR+MFLAM +++RVII+KLADRLHNMRTL  M P KQ   A ET+ ++AP+
Sbjct: 158 EVQ---AENLRKMFLAMAKDIRVIIIKLADRLHNMRTLEFMTPAKQKEKAKETMDIYAPI 214

Query: 304 AKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQF 363
           A+ LG+ +IK+EL++L+  Y+  E +                  +  N+I  +K E ++F
Sbjct: 215 AQRLGISKIKTELDDLALKYSQPEVF-----------------FDLVNQINARKTEREEF 257

Query: 364 LDLM-----------TVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPC 412
           +  +           ++K ++    K  +SIYK ++    ++++V  +  +RII+     
Sbjct: 258 VQQIVDEVSTHMKNASIKADVNGRVKHFFSIYKKMVNQDKTVDQVYDLFAVRIIV----- 312

Query: 413 SGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFR 472
                     + CY  LG++H ++TPIP   KDYIA PKPN YQSLHTTL+  + +    
Sbjct: 313 -------DSVKDCYAALGVIHEMYTPIPGRFKDYIAMPKPNMYQSLHTTLMSSVGQP--- 362

Query: 473 LEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISW 532
            E+QIRT+EM   AE GIAAH+  +               S  GK      A    ++SW
Sbjct: 363 FEIQIRTQEMHKTAEYGIAAHWKYK--------------ESNDGKKSV--EAQEEEKLSW 406

Query: 533 LNAIREWQEEFVGNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMI 590
           L  I EWQ +   N   REF+  I    DL    V+ FTP+G++KNLP G+T +D+AY I
Sbjct: 407 LRQILEWQRDMSDN---REFLSLIKGDLDLFAEDVYCFTPQGDVKNLPNGSTPIDFAYAI 463

Query: 591 HTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
           H+ +GNKMV A+VNG LV+  + + N + +EI+T
Sbjct: 464 HSAVGNKMVGARVNGKLVNIEYKIQNGDRIEILT 497


>gi|406910424|gb|EKD50451.1| hypothetical protein ACD_62C00541G0007 [uncultured bacterium]
          Length = 715

 Score =  348 bits (892), Expect = 7e-93,   Method: Compositional matrix adjust.
 Identities = 193/478 (40%), Positives = 290/478 (60%), Gaps = 56/478 (11%)

Query: 149 VRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVT 208
           +R+A   A  AH+GQKR+SGEPF+IHP+EVA+IL +L++D  S+ A +LHDTVEDT +++
Sbjct: 23  IRKAYDFAASAHEGQKRKSGEPFLIHPLEVAKILTQLKMDISSLIAAILHDTVEDT-ILS 81

Query: 209 FERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVII 268
           ++ I+  FG  V  IV+G TK+SK+   K  N+    +D +A++ R+M +AM++++RVI+
Sbjct: 82  YDDIKASFGVDVAEIVDGVTKISKI---KISNQ----EDRQAENYRKMIIAMSKDIRVIM 134

Query: 269 VKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAED 328
           VKLADR++NMRTL  M   +Q  IA ETL ++AP+A  +G+YQ K ELE LS  +   E 
Sbjct: 135 VKLADRINNMRTLQFMSEARQVGIAQETLDIYAPIAGRMGIYQFKEELEELSLKFLKPEI 194

Query: 329 YAKVKRRVADLYKEHEKELEEANKILMKKIED--DQFLDLMTVKTEIRSVCKEPYSIYKA 386
           Y+++            K LE+  ++ M +++D     L +   + +I    K PYS+Y+ 
Sbjct: 195 YSQLATTT--------KRLEKLRELYMARVKDALTNSLRVSIPQFDIFGRIKRPYSVYRK 246

Query: 387 VLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDY 446
           +L  +  +++V+ +   R+++            S  + CY VLG++H +W PI    KDY
Sbjct: 247 MLAQQIELDDVHDLMAFRVMV------------SSIEQCYEVLGIIHSLWKPIQGRFKDY 294

Query: 447 IATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGH 506
           IA PK N YQSLHTT++ F  E   R+E QIRT EM+ IA++GIAAH+            
Sbjct: 295 IAMPKANSYQSLHTTVLCFDAE---RVEFQIRTHEMNEIADKGIAAHWK----------- 340

Query: 507 ARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSRVF 566
            + +GR        L+  + A +  WL  + +WQ E   ++   EFVDT   DL    +F
Sbjct: 341 YKDDGR--------LDTKDEA-KFRWLRHLMDWQSELKDSL---EFVDTFKLDLFEDEIF 388

Query: 567 VFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
           VFTP G+IKNLP  AT VD+AY IH+ +G +   A+VNG +VS  H L + + +EIIT
Sbjct: 389 VFTPNGDIKNLPFNATPVDFAYSIHSNVGERCAGARVNGRIVSINHKLDSGDTIEIIT 446


>gi|358066224|ref|ZP_09152755.1| hypothetical protein HMPREF9473_04818 [Clostridium hathewayi
           WAL-18680]
 gi|356695553|gb|EHI57181.1| hypothetical protein HMPREF9473_04818 [Clostridium hathewayi
           WAL-18680]
          Length = 762

 Score =  348 bits (892), Expect = 7e-93,   Method: Compositional matrix adjust.
 Identities = 201/507 (39%), Positives = 305/507 (60%), Gaps = 61/507 (12%)

Query: 126 SPERLWEDLRPTISYLSP-NELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
           SPE L++DL  +I    P +++ +V +A  +A++AH  QKR+SGEP+IIHP+ VA IL +
Sbjct: 25  SPEILYQDLIKSIRKYHPSDDISMVEKAYRIAYDAHKEQKRKSGEPYIIHPLCVAIILAD 84

Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
           LELD ESI AG+LHD VEDT V+T + + +EFG+ V  +V+G TK+++L     K     
Sbjct: 85  LELDKESIVAGILHDVVEDT-VMTLDEVAKEFGSEVALLVDGVTKLTQLSWSMDK----- 138

Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
            Q+++A++LR+MFLAM +++RVI++KLADRLHNMRTL +M P KQ   A ET+ +++P+A
Sbjct: 139 -QEIQAENLRKMFLAMAKDIRVILIKLADRLHNMRTLQYMTPEKQKEKARETMDIYSPIA 197

Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
             LG+ +IK EL++LS  Y   + Y  +  +++ L K+  +   +    ++++++     
Sbjct: 198 HRLGISKIKIELDDLSLKYLEPDVYYDLAEKIS-LRKDAREAFVQG---IVEEVKSHMVE 253

Query: 365 DLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
             +  + E R   K  +SIYK ++    +++++  +  +RII++              + 
Sbjct: 254 AGIDARVEGR--VKHFFSIYKKMVNQDKTLDQIYDLFAVRIIVE------------SVKD 299

Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRT 479
           CY  LG++H ++ PIP   KDYIA PKPN YQSLHTTLI     PF        E+QIRT
Sbjct: 300 CYAALGVIHELYKPIPGRFKDYIAMPKPNMYQSLHTTLIGSNGQPF--------EIQIRT 351

Query: 480 EEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREW 539
            EM   AE GIAAH+  +   +G +                        ++SWL  I EW
Sbjct: 352 FEMHRTAEFGIAAHWKYKESGSGQIAAGSEEA-----------------KLSWLRQILEW 394

Query: 540 QEEFVGNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNK 597
           Q +   N   +EF++ I    DL    V+ FTP G++KNLP G+T VD+AY IH+ +GNK
Sbjct: 395 QTDMSDN---KEFLNLIKSDLDLFSDSVYCFTPSGDVKNLPSGSTPVDFAYAIHSAVGNK 451

Query: 598 MVAAKVNGNLVSPTHVLANAEVVEIIT 624
           MV A+VNG LV+  +V+ N + +EIIT
Sbjct: 452 MVGARVNGKLVNIDYVIQNGDRIEIIT 478


>gi|238925277|ref|YP_002938794.1| (p)ppGpp synthetase I, SpoT/RelA [Eubacterium rectale ATCC 33656]
 gi|238876953|gb|ACR76660.1| (p)ppGpp synthetase I, SpoT/RelA [Eubacterium rectale ATCC 33656]
          Length = 786

 Score =  347 bits (891), Expect = 8e-93,   Method: Compositional matrix adjust.
 Identities = 204/511 (39%), Positives = 291/511 (56%), Gaps = 57/511 (11%)

Query: 126 SPERLWEDLRPTISYLSP-NELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
           SPE L+++L+  I    P ++  LV +A  +A++AH GQ R+SGEP+IIHP+ VA IL E
Sbjct: 34  SPEELYDELKKEIKKYHPSDDTSLVDKAYRVAYDAHKGQARKSGEPYIIHPLCVAIILAE 93

Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKC----KN 240
           LELD E+IAAGLLHD +EDT ++T + +  EFG  V  +V+G TK+  L         K+
Sbjct: 94  LELDKETIAAGLLHDVLEDT-IMTMDEMRAEFGDDVAHLVDGVTKLKHLHLTDSTKDPKD 152

Query: 241 ENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVF 300
           +N    +++A++LR+MFLAM +++RVI++KLADRLHNMRTL +     Q  IA ET  ++
Sbjct: 153 KNADRLEMQAENLRKMFLAMAKDIRVILIKLADRLHNMRTLKYQSKEAQQRIARETQDIY 212

Query: 301 APLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIED 360
            P+A+ LG+ +IK ELE+L   Y   + Y  +  +VA    E +  ++     + K + D
Sbjct: 213 CPIAQRLGISKIKIELEDLCMKYLYPDAYYDLVEKVALRKTERDTYIQGLVNDVKKYVSD 272

Query: 361 DQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCS 420
                   +K EI    K  +SIYK ++    +I+++  +  +RI++   P         
Sbjct: 273 ------AGIKAEIYGRAKHFFSIYKKMVNQDKTIDQIYDLFAIRILVDTIPD-------- 318

Query: 421 PQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEV 475
               CY VLG++H  + PIP   KDYIA PK N YQSLHTTLI     PF        E+
Sbjct: 319 ----CYAVLGIIHEKYKPIPGRFKDYIAMPKQNMYQSLHTTLIGPSGQPF--------EI 366

Query: 476 QIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNA 535
           QIRT EM   AE GIAAH+                 +                ++SWL  
Sbjct: 367 QIRTYEMHRTAEYGIAAHWK---------------YKETNNGNATTTTVTEEEKLSWLRQ 411

Query: 536 IREWQEEFVGNMTSREFVDTITRD--LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTE 593
           I EWQ++   N   +EF+  +  D  L    VF FTP G++KNLPKG+T +D+AY IH+ 
Sbjct: 412 ILEWQQDMSDN---KEFMTLLKSDLNLFSDNVFAFTPSGDVKNLPKGSTPIDFAYSIHSA 468

Query: 594 IGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
           +GNKMV AKVNG LV   +V+ N + +EIIT
Sbjct: 469 VGNKMVGAKVNGKLVPIDYVIKNGDQIEIIT 499


>gi|312864406|ref|ZP_07724639.1| GTP diphosphokinase [Streptococcus downei F0415]
 gi|311100127|gb|EFQ58338.1| GTP diphosphokinase [Streptococcus downei F0415]
          Length = 766

 Score =  347 bits (891), Expect = 8e-93,   Method: Compositional matrix adjust.
 Identities = 191/492 (38%), Positives = 302/492 (61%), Gaps = 49/492 (9%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           +Y++P+++ +V++AL  A EAH  QKR+SGEP+I+HP++VA IL  L+LD  ++A G LH
Sbjct: 44  TYMTPDDVAIVQKALDYATEAHKTQKRQSGEPYIVHPIQVAGILAGLQLDAVTVACGFLH 103

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT V T E +E +FG  V +IV+G   V+KLGK+K K+    +    A++ R+M +
Sbjct: 104 DVVEDTEV-TLEDLERDFGLKVSQIVDG---VTKLGKVKYKSHEEQL----AENHRKMLM 155

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM++++RVI+VKLADRLHNMRTL H+ P KQ  I+ ET++++APLA  LG+  IK ELE+
Sbjct: 156 AMSKDIRVILVKLADRLHNMRTLKHLRPDKQKRISRETMEIYAPLAHRLGISAIKWELED 215

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
           L+F Y N  ++ K+   + +  +E E  ++E    +++KI+   +     ++ +I    K
Sbjct: 216 LAFRYLNEAEFYKISHMMHEKRRERESLVDE----IVEKIK--AYTAEQGLQGKIYGRPK 269

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIY+ +   R   +++  +  +R I           + +P  + Y +LG +H +W P
Sbjct: 270 HIYSIYRKMRDKRKRFDQIYDLIAIRCI-----------MDTPSDV-YAMLGYIHELWRP 317

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PK NGYQS+HTT    +Y     +E+QIRT+EM  +AE G+AAH++ + 
Sbjct: 318 MPGRFKDYIANPKSNGYQSIHTT----VYGPKGPIEIQIRTQEMHEVAEYGVAAHWAYKK 373

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
            + G V                 +    A+ ++W+  + E Q    G+  ++EFVD++  
Sbjct: 374 GIKGKV-----------------DAQESAIGMNWIQDLVELQAGSNGD--AQEFVDSVKE 414

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           D+  +R++VFTP G+++ LP+ +  +D+AY IHT++G K V AKVNG +V  T  L   +
Sbjct: 415 DIFSARIYVFTPSGDVQELPRDSGPIDFAYAIHTQVGEKAVGAKVNGRMVPLTAKLKTGD 474

Query: 619 VVEIITYNVSFS 630
           VVEI+T   SF 
Sbjct: 475 VVEIVTNQNSFG 486


>gi|238922253|ref|YP_002935767.1| GTP pyrophosphokinase [Eubacterium eligens ATCC 27750]
 gi|238873925|gb|ACR73633.1| GTP pyrophosphokinase [Eubacterium eligens ATCC 27750]
          Length = 770

 Score =  347 bits (891), Expect = 8e-93,   Method: Compositional matrix adjust.
 Identities = 208/507 (41%), Positives = 302/507 (59%), Gaps = 61/507 (12%)

Query: 126 SPERLWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
           SPE L++DL   I    P+ +L  + +A   A +AH+GQ R+SGEP+IIHP+ VA IL E
Sbjct: 34  SPEELYKDLIAAIKKYHPSTDLSDIEKAYETARKAHEGQFRKSGEPYIIHPLCVAIILAE 93

Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
           LELD ESI AGLLHD VEDT V+T E + +EFG  V  +V+G TK+++L      N  H 
Sbjct: 94  LELDKESIIAGLLHDVVEDT-VMTSEDVAKEFGDEVALLVDGVTKLTQL------NYQHD 146

Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
             +V+A++LR+MFLAM +++RVI++KLADRLHNMRT+ +  P KQ   + ET++++AP+A
Sbjct: 147 KIEVQAENLRKMFLAMAKDIRVILIKLADRLHNMRTMQYQSPAKQIEKSRETMEIYAPIA 206

Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
             LG+ +IK EL++LS  Y   + Y  +  +V +L +      E   K ++K++     +
Sbjct: 207 HRLGISKIKVELDDLSMKYLMPDVYNDLVEQV-NLNRPGR---EAFIKSIIKEV--GMHI 260

Query: 365 DLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
               ++ EI    K  +SIY+ ++    +++++  I  +RI +               + 
Sbjct: 261 SNAGIEAEIDGRVKHFFSIYRKMVNQNKTLDQIYDIFAVRIKV------------DTVKD 308

Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRT 479
           CY  LG++H ++ PIP   KDYIA PKPN YQSLHTTLI     PF        E+QIRT
Sbjct: 309 CYAALGVIHEMYKPIPGRFKDYIAMPKPNNYQSLHTTLIASNGQPF--------EIQIRT 360

Query: 480 EEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREW 539
            EM  IAE GIAAH+                 +   GKT   +N +   ++SWL  I EW
Sbjct: 361 YEMHKIAEYGIAAHW-----------------KYKEGKTGEKDNQSEEAKLSWLRQILEW 403

Query: 540 QEEFVGNMTSREFVDTITRD--LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNK 597
           Q+E   N   +EF+ +I  D  L    V+ FTP G++KNLP G+  +D+AY IH+ +GNK
Sbjct: 404 QKEMSDN---KEFLSSIKNDLNLFSDSVYCFTPSGDVKNLPAGSCPIDFAYSIHSAVGNK 460

Query: 598 MVAAKVNGNLVSPTHVLANAEVVEIIT 624
           MV A+VNG LV+  +V+ N + +EIIT
Sbjct: 461 MVGARVNGKLVTIDYVIKNGDRIEIIT 487


>gi|373468555|ref|ZP_09559802.1| putative GTP diphosphokinase [Lachnospiraceae bacterium oral taxon
           082 str. F0431]
 gi|371766018|gb|EHO54298.1| putative GTP diphosphokinase [Lachnospiraceae bacterium oral taxon
           082 str. F0431]
          Length = 762

 Score =  347 bits (891), Expect = 8e-93,   Method: Compositional matrix adjust.
 Identities = 204/502 (40%), Positives = 297/502 (59%), Gaps = 51/502 (10%)

Query: 126 SPERLWEDLRPTISYLSP-NELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
           SPE L + L   I +  P +++ ++ +A  LA +AH+ QKR+SGEP+IIHP+ VA IL E
Sbjct: 25  SPESLHKKLIEIILHYHPSDDISMITKAYELAKKAHNDQKRKSGEPYIIHPICVAIILAE 84

Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
           LELD E+IAAGLLHD +EDT  +T++ + + FG  V  +V+G   V+KL +L  KN+   
Sbjct: 85  LELDKETIAAGLLHDVIEDT-AITYDELADMFGVDVANLVDG---VTKLTQLSLKNDKIE 140

Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
           +Q   A++LR+MFLAM +++RVI++KLADRLHNMRTL +M P KQ   A ET+ +++P+A
Sbjct: 141 MQ---AENLRKMFLAMAKDIRVILIKLADRLHNMRTLQYMKPEKQKEKARETMDIYSPIA 197

Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
           + LG+ +IK EL++LS  Y + + Y  +  ++A   KE  ++  +    ++KK    Q L
Sbjct: 198 QRLGISKIKVELDDLSLKYLHPDVYYDLSEKLA-FRKEQRQQFVDD---IIKKFS--QHL 251

Query: 365 DLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
               +K  I    K  +SIYK ++    +++++  +  +RII++                
Sbjct: 252 SATGMKFTINGRVKHLFSIYKKMVNQNKTLDQIYDVFAIRIIVESVTD------------ 299

Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDL 484
           CY  LG  H I+ PIP   KDYIA PKPN YQSLHTTLI    ++    EVQIRT EM  
Sbjct: 300 CYLALGTAHEIYKPIPGRFKDYIAMPKPNMYQSLHTTLIS---DTGQPFEVQIRTVEMHK 356

Query: 485 IAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFV 544
            AE GIAAH+  +   +G V     +                  +++WL  I EWQ +  
Sbjct: 357 TAEFGIAAHWKYKESGSGSVAKGAEDA-----------------KMNWLRQILEWQRDMS 399

Query: 545 GNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAK 602
            N    EF+  I    DL    V+ FTP G++KNLP G+  +D+AY IH+ +GNKMV A+
Sbjct: 400 DNA---EFLKVIKSDLDLFSDNVYCFTPDGDVKNLPAGSNPIDFAYSIHSAVGNKMVGAR 456

Query: 603 VNGNLVSPTHVLANAEVVEIIT 624
           VNG LV+  + L + + VEIIT
Sbjct: 457 VNGRLVNIDYELKSGDRVEIIT 478


>gi|433655146|ref|YP_007298854.1| (p)ppGpp synthetase, RelA/SpoT family [Thermoanaerobacterium
           thermosaccharolyticum M0795]
 gi|433293335|gb|AGB19157.1| (p)ppGpp synthetase, RelA/SpoT family [Thermoanaerobacterium
           thermosaccharolyticum M0795]
          Length = 718

 Score =  347 bits (891), Expect = 9e-93,   Method: Compositional matrix adjust.
 Identities = 197/488 (40%), Positives = 296/488 (60%), Gaps = 62/488 (12%)

Query: 142 SPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTV 201
           S N++ L+ +A   A +AH+GQ R SGEP+I+HPVEVA IL  LELD  +IA+GLLHD +
Sbjct: 15  SENDINLIFKAYDYALKAHEGQYRNSGEPYIVHPVEVAMILTNLELDVSTIASGLLHDVI 74

Query: 202 EDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMT 261
           EDT++ T++ I+ EFG  +  +V+G   V+KLG ++ K    S  + +A+++R+M +AM 
Sbjct: 75  EDTSI-TYDDIKNEFGQEIADLVDG---VTKLGMIEYK----SKVEQQAENMRKMLIAMA 126

Query: 262 EEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSF 321
           +++RVI++KLADRLHNMRTL ++   KQ   A ETL+++AP+A  LGM  IK ELE+LS 
Sbjct: 127 KDIRVIMIKLADRLHNMRTLKYLSEEKQKEKAQETLEIYAPIAHRLGMSMIKWELEDLSL 186

Query: 322 MYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPY 381
            Y + +DY  +  +VA   KE E+ ++E    L+ K+++   L+ + +K E+    K  Y
Sbjct: 187 RYLHPDDYYSLVEKVAKKRKEREESIKE----LIDKLKEK--LNEIGIKAEVDGRPKHFY 240

Query: 382 SIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPR 441
           SIYK + +   +  ++  +  +R+I+            +  + CY  LG VH +W P+P 
Sbjct: 241 SIYKKMKQQNKTFEQIYDLMAVRVIV------------NTVKDCYGTLGAVHTLWKPMPG 288

Query: 442 AMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
             KDYIA PKPN YQSLHTT+I     PF        E+QIRT +M   AE GIAAH+  
Sbjct: 289 RFKDYIAMPKPNMYQSLHTTVIGPKGEPF--------EIQIRTWDMHRTAEYGIAAHW-- 338

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
                          +   GK+          ++SWL  + EWQ E      ++EF++T+
Sbjct: 339 ---------------KYKEGKSY---EDEFDAKLSWLRQLLEWQREL---KDAKEFMETL 377

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             DL    V+VFTP+G++ +LP G+T +D+AY IHTEIG+++  AKVNG +V   + L N
Sbjct: 378 KIDLFTDEVYVFTPKGDVISLPAGSTPIDFAYSIHTEIGHRLNGAKVNGKIVPIYYELKN 437

Query: 617 AEVVEIIT 624
            ++VEI+T
Sbjct: 438 GDIVEILT 445


>gi|218132940|ref|ZP_03461744.1| hypothetical protein BACPEC_00801 [[Bacteroides] pectinophilus ATCC
           43243]
 gi|217991813|gb|EEC57817.1| RelA/SpoT family protein [[Bacteroides] pectinophilus ATCC 43243]
          Length = 776

 Score =  347 bits (891), Expect = 9e-93,   Method: Compositional matrix adjust.
 Identities = 204/507 (40%), Positives = 304/507 (59%), Gaps = 61/507 (12%)

Query: 126 SPERLWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
           SP+ L+  L  TI    P+ ++  + +A  +A +AH+GQ R+SGEP+IIHP+ VA IL E
Sbjct: 41  SPDVLYAQLVDTIKKYHPSTDMSQIEKAYKIATKAHEGQFRKSGEPYIIHPICVAIILAE 100

Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
           LELD ESI AGLLHD VEDT V+T + I  EFGA V  +V+G TK+++L      N  H 
Sbjct: 101 LELDKESIIAGLLHDVVEDT-VMTTDDITREFGAEVALLVDGVTKLTQL------NYEHD 153

Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
             +++A++LR+MFLAM +++RVI++KLADRLHNMRT+ +  P KQ   + ET++++AP+A
Sbjct: 154 KIEIQAENLRKMFLAMAKDIRVIMIKLADRLHNMRTMQYQSPAKQIEKSRETMEIYAPIA 213

Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
             LG+ +IK EL++LS  Y   + Y  + +++ ++ KE+    E   K ++K+++    +
Sbjct: 214 HRLGISKIKVELDDLSMQYLMPDVYNDLVKQI-NMNKENR---EAFIKSIIKEVK--MHI 267

Query: 365 DLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
           +   ++ EI    K  +SIY+ ++    +++++  +  +RI ++              + 
Sbjct: 268 ENAGIEAEIDGRVKHFFSIYRKMVNQNKTLDQIYDLFAVRIKVE------------TVKD 315

Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRT 479
           CY  LG++H ++ PIP   KDYIA PK N YQSLHTTLI     PF        E+QIRT
Sbjct: 316 CYAALGVIHEMYKPIPGRFKDYIAMPKENMYQSLHTTLIASNGRPF--------EIQIRT 367

Query: 480 EEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREW 539
            EM   AE GIAAH+                 +   GKT    N N   ++SWL  I EW
Sbjct: 368 YEMHRTAEYGIAAHW-----------------KYKEGKTGETGNQNEEAKLSWLRQILEW 410

Query: 540 QEEFVGNMTSREFVDTITRD--LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNK 597
           Q +   N   +EF+ +I  D  L    V+ FTP G++KNLP G+T +D+AY IHT +GNK
Sbjct: 411 QRDMSDN---KEFLSSIKNDLNLFSDSVYCFTPTGDVKNLPTGSTPIDFAYSIHTAVGNK 467

Query: 598 MVAAKVNGNLVSPTHVLANAEVVEIIT 624
           MV A+VNG LV+  + + N + +EIIT
Sbjct: 468 MVGARVNGKLVTIDYQIKNGDRIEIIT 494


>gi|384135926|ref|YP_005518640.1| (p)ppGpp synthetase I SpoT/RelA [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius Tc-4-1]
 gi|339290011|gb|AEJ44121.1| (p)ppGpp synthetase I, SpoT/RelA [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius Tc-4-1]
          Length = 725

 Score =  347 bits (891), Expect = 9e-93,   Method: Compositional matrix adjust.
 Identities = 201/492 (40%), Positives = 287/492 (58%), Gaps = 50/492 (10%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           SY+SP E+  VRRA   A +AH GQ R SGEP+I HP+ VA IL +L LD  +I AGLLH
Sbjct: 19  SYMSPEEIAAVRRAYEFAAKAHQGQTRLSGEPYISHPLAVAYILADLRLDAAAIMAGLLH 78

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT+V +   I + FGA V  +V+G TK+ ++ K   + E       +A++LR+MF+
Sbjct: 79  DVVEDTSV-SDSTIVQTFGAEVATLVDGVTKLKRI-KFDSREEQ------QAENLRKMFM 130

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM  ++RV+I+KLADRLHNMRTL +  P  Q   A ETL++FAPLA  LG+  IK ELE+
Sbjct: 131 AMARDIRVLIIKLADRLHNMRTLKYQSPETQVRKARETLEIFAPLAHRLGINTIKWELED 190

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
           LS  Y N + Y ++   +A   +E E+ +E    +L +K+ +      + +K ++    K
Sbjct: 191 LSLRYLNPQQYYRIVNLMARKRQEREQYIEGVIAVLREKLAE------LNLKADVSGRAK 244

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIY+ ++      NE+  +  +RII++              + CY  LG+VH +W P
Sbjct: 245 HIYSIYRKMVTQHKEFNEIYDLFAIRIIVESI------------KDCYGALGVVHTMWKP 292

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PK N YQSLHTT+I    E    LE+QIRT EM   AE GIAAH+    
Sbjct: 293 MPGRFKDYIAMPKANMYQSLHTTVIGPNGEP---LEIQIRTWEMHQTAEYGIAAHW---- 345

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
            V    G  R                + A +++W   + EWQ++F     ++EF++T+  
Sbjct: 346 -VYKESGSKRVED-------------DFAKKLAWFREVLEWQQDF---RDAQEFMETLKI 388

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           DL   +VFVFTP+G++  LP G+  +D+AY IHT+IGN  + AKVNG +V   + L   +
Sbjct: 389 DLFSDQVFVFTPKGDVIELPAGSVPIDFAYRIHTDIGNHCIGAKVNGKMVPLDYRLRTGD 448

Query: 619 VVEIITYNVSFS 630
           +VEIIT   S+ 
Sbjct: 449 IVEIITSKHSYG 460


>gi|344996822|ref|YP_004799165.1| (p)ppGpp synthetase I SpoT/RelA [Caldicellulosiruptor lactoaceticus
           6A]
 gi|343965041|gb|AEM74188.1| (p)ppGpp synthetase I, SpoT/RelA [Caldicellulosiruptor
           lactoaceticus 6A]
          Length = 726

 Score =  347 bits (891), Expect = 9e-93,   Method: Compositional matrix adjust.
 Identities = 200/505 (39%), Positives = 301/505 (59%), Gaps = 67/505 (13%)

Query: 128 ERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELEL 187
           ++L E +     Y S  ++ L+++A   A + HDGQ R SGEP+I+HP+EVA IL +LEL
Sbjct: 7   DKLNELIEKVKKYASEEDINLIKKAFEFAQKYHDGQVRSSGEPYIVHPLEVALILADLEL 66

Query: 188 DWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQD 247
           D  SI AGLLHD VEDT+  + E +E EFG  +  +V+G   V+KLGKL    E  S  +
Sbjct: 67  DIASIVAGLLHDVVEDTSA-SLEDVEREFGKEIAELVDG---VTKLGKL----EFTSKLE 118

Query: 248 VKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLL 307
            +A++ R+M +AM +++RVI++KLADRLHNMRTL ++PP KQ   A ET+ ++APLA  L
Sbjct: 119 RQAENYRKMLIAMAKDIRVILIKLADRLHNMRTLKYLPPEKQRQKAQETIDIYAPLAHRL 178

Query: 308 GMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLM 367
           G+ +IK ELE+LS  Y + E Y  +  ++A    E E+ +++   ++ +K+++       
Sbjct: 179 GISKIKWELEDLSLRYLDPEGYYDLVEKIAKKRVEREEYIKKIISLISEKLKE------- 231

Query: 368 TVKTEIRSVCKEP---YSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
               E+  +   P   YSIY+ + +   ++ E+  +  +RII+            +  + 
Sbjct: 232 -ANIEVGQIDGRPKHFYSIYRKMKEQGKTLEEIYDLFAIRIIV------------NSVKD 278

Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRT 479
           CY VLG++H ++ P+P   KDYIA PKPN YQSLHTT+I     PF        EVQIRT
Sbjct: 279 CYGVLGIIHTLFKPMPGRFKDYIAMPKPNMYQSLHTTVIGPEGEPF--------EVQIRT 330

Query: 480 EEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREW 539
            +M   AE GIAAH+  +             GR        + + +   + +WL  + EW
Sbjct: 331 FDMHRTAEYGIAAHWKYK------------EGR--------IKSTDEDEKFAWLRELLEW 370

Query: 540 QEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMV 599
           Q+E      ++EF++++  +L    VFVFTP+G++ +LP+G+T +D+AY IH+EIGNKM 
Sbjct: 371 QKEL---KDAKEFMESLKINLFSDEVFVFTPKGDVISLPQGSTPIDFAYAIHSEIGNKMA 427

Query: 600 AAKVNGNLVSPTHVLANAEVVEIIT 624
            AKVNG LV   + L N ++VEIIT
Sbjct: 428 GAKVNGKLVPIDYELKNGDIVEIIT 452


>gi|312792967|ref|YP_004025890.1| (p)ppgpp synthetase i, spot/rela [Caldicellulosiruptor
           kristjanssonii 177R1B]
 gi|312180107|gb|ADQ40277.1| (p)ppGpp synthetase I, SpoT/RelA [Caldicellulosiruptor
           kristjanssonii 177R1B]
          Length = 726

 Score =  347 bits (891), Expect = 9e-93,   Method: Compositional matrix adjust.
 Identities = 200/505 (39%), Positives = 301/505 (59%), Gaps = 67/505 (13%)

Query: 128 ERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELEL 187
           ++L E +     Y S  ++ L+++A   A + HDGQ R SGEP+I+HP+EVA IL +LEL
Sbjct: 7   DKLNELIEKVKKYASEEDINLIKKAFEFAQKYHDGQVRSSGEPYIVHPLEVALILADLEL 66

Query: 188 DWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQD 247
           D  SI AGLLHD VEDT+  + E +E EFG  +  +V+G   V+KLGKL    E  S  +
Sbjct: 67  DIASIVAGLLHDVVEDTSA-SLEDVEREFGKEIAELVDG---VTKLGKL----EFTSKLE 118

Query: 248 VKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLL 307
            +A++ R+M +AM +++RVI++KLADRLHNMRTL ++PP KQ   A ET+ ++APLA  L
Sbjct: 119 RQAENYRKMLIAMAKDIRVILIKLADRLHNMRTLKYLPPEKQRQKAQETIDIYAPLAHRL 178

Query: 308 GMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLM 367
           G+ +IK ELE+LS  Y + E Y  +  ++A    E E+ +++   ++ +K+++       
Sbjct: 179 GISKIKWELEDLSLRYLDPEGYYDLVEKIAKKRVEREEYIKKIISLISEKLKE------- 231

Query: 368 TVKTEIRSVCKEP---YSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
               E+  +   P   YSIY+ + +   ++ E+  +  +RII+            +  + 
Sbjct: 232 -ANIEVGQIDGRPKHFYSIYRKMKEQGKTLEEIYDLFAIRIIV------------NSVKD 278

Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRT 479
           CY VLG++H ++ P+P   KDYIA PKPN YQSLHTT+I     PF        EVQIRT
Sbjct: 279 CYGVLGIIHTLFKPMPGRFKDYIAMPKPNMYQSLHTTVIGPEGEPF--------EVQIRT 330

Query: 480 EEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREW 539
            +M   AE GIAAH+  +             GR        + + +   + +WL  + EW
Sbjct: 331 FDMHRTAEYGIAAHWKYK------------EGR--------IKSTDEDEKFAWLRELLEW 370

Query: 540 QEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMV 599
           Q+E      ++EF++++  +L    VFVFTP+G++ +LP+G+T +D+AY IH+EIGNKM 
Sbjct: 371 QKEL---KDAKEFMESLKINLFSDEVFVFTPKGDVISLPQGSTPIDFAYAIHSEIGNKMA 427

Query: 600 AAKVNGNLVSPTHVLANAEVVEIIT 624
            AKVNG LV   + L N ++VEIIT
Sbjct: 428 GAKVNGKLVPIDYELKNGDIVEIIT 452


>gi|423452296|ref|ZP_17429149.1| GTP pyrophosphokinase [Bacillus cereus BAG5X1-1]
 gi|423470622|ref|ZP_17447366.1| GTP pyrophosphokinase [Bacillus cereus BAG6O-2]
 gi|401139934|gb|EJQ47491.1| GTP pyrophosphokinase [Bacillus cereus BAG5X1-1]
 gi|402436288|gb|EJV68320.1| GTP pyrophosphokinase [Bacillus cereus BAG6O-2]
          Length = 727

 Score =  347 bits (891), Expect = 9e-93,   Method: Compositional matrix adjust.
 Identities = 201/496 (40%), Positives = 291/496 (58%), Gaps = 50/496 (10%)

Query: 134 LRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIA 193
           L     YL+  ++ELV RA   A +AH  Q R+SGEP+IIHP++VA IL +L +D  +++
Sbjct: 13  LEKASQYLADEDIELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDPATVS 72

Query: 194 AGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDL 253
           AG LHD VEDT + T E IE EF   +  +V+G   V+KLGK+K K+  H  Q  +A++ 
Sbjct: 73  AGFLHDVVEDTEI-TLEDIEREFNKEIAMLVDG---VTKLGKIKYKS--HEQQ--QAENH 124

Query: 254 RQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIK 313
           R+MF+AM +++RVI++KLADRLHNMRTL H+P  KQ  IA ETL++FAPLA  LG+  IK
Sbjct: 125 RKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGISTIK 184

Query: 314 SELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEI 373
            ELE+ S  Y N + Y     R+ +L K    E EE    +M  I +   L  ++++ EI
Sbjct: 185 WELEDTSLRYLNPQQYY----RIVNLMKRKRAEREEYLDEVMTGIREK--LKEVSIQPEI 238

Query: 374 RSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVH 433
               K  YSIY+ +       NE+  +  +R+++            +  + CY VLG++H
Sbjct: 239 SGRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVV------------NSIKDCYAVLGIIH 286

Query: 434 GIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAH 493
             W P+P   KDYIA PK N YQSLHTT+I    +    LEVQIRT+EM  IAE GIAAH
Sbjct: 287 TCWKPMPGRFKDYIAMPKANLYQSLHTTVIGPKGDP---LEVQIRTKEMHEIAEFGIAAH 343

Query: 494 YSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFV 553
           +            A   G++            +  +++W   I EWQ E      + EF+
Sbjct: 344 W------------AYKEGKAAE------TTGTLEKKLTWFRQILEWQNE---ASNAEEFM 382

Query: 554 DTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHV 613
           +++  DL    VFVFTP+G++  LP G+  +D++Y +H+EIGNK + AKVNG +V+  + 
Sbjct: 383 ESLKIDLFSDMVFVFTPKGDVMELPLGSVPIDFSYRVHSEIGNKTIGAKVNGKMVTLDYK 442

Query: 614 LANAEVVEIITYNVSF 629
           L   +++EI+T   S+
Sbjct: 443 LKTGDIIEILTSKHSY 458


>gi|403668327|ref|ZP_10933602.1| GTP pyrophosphokinase [Kurthia sp. JC8E]
          Length = 730

 Score =  347 bits (891), Expect = 9e-93,   Method: Compositional matrix adjust.
 Identities = 196/491 (39%), Positives = 294/491 (59%), Gaps = 49/491 (9%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           SY++   +  V+RA  LA +AH  Q R SGEP+I+HP++VA IL EL++D E+++AG LH
Sbjct: 18  SYMNDEHVAFVQRAYELARDAHKEQFRSSGEPYIVHPIQVAGILAELQMDPETVSAGFLH 77

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT+V T E + E+FG  V  +V+G   V+KLGK+K K    S ++ +A++ R+MF+
Sbjct: 78  DVVEDTSV-TREDLVEQFGEEVAMLVDG---VTKLGKIKYK----SKKEQQAENHRKMFV 129

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM +++RVI++KLADRLHNMRTL H+P  KQ  I+ ETL++FAPLA  LG+  IK ELE+
Sbjct: 130 AMAQDIRVILIKLADRLHNMRTLKHLPVEKQRRISKETLEIFAPLAHRLGISAIKWELED 189

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
            +  Y N + Y     R+ +L K    E E   + +M +I +   LD +++  ++    K
Sbjct: 190 TALRYLNPQQYY----RIVNLMKRKRTEREAYLQNVMDEITEQ--LDDVSIPADLSGRPK 243

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIY  +       NE+  +  +R+I+               + CY VLG+VH +W P
Sbjct: 244 HIYSIYNKMQSQHKQFNEIYDLLAVRVIV------------DSIKDCYAVLGIVHTLWKP 291

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PK N YQSLHTT+I    +    LEVQIRT+ M  IAE G+AAH++ + 
Sbjct: 292 MPGRFKDYIAMPKQNLYQSLHTTVIGPYGDP---LEVQIRTKSMHNIAEFGVAAHWAYK- 347

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                            GK+    N +I  +++W   I E+Q E   +  + EF++++  
Sbjct: 348 ----------------EGKSAVTENTDIDSKLTWFREILEFQNE---SNDAEEFMESLKF 388

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           DL    V+VF+P+G++  LP G+  +D+AY +H+EIGN+ + A+VNG +V     L   +
Sbjct: 389 DLFSDMVYVFSPKGDVLELPAGSVPIDFAYRVHSEIGNRTIGARVNGKMVPLDTPLETGD 448

Query: 619 VVEIITYNVSF 629
           +VE+IT   SF
Sbjct: 449 IVEVITSKQSF 459


>gi|300088447|ref|YP_003758969.1| (p)ppGpp synthetase I [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
 gi|299528180|gb|ADJ26648.1| (p)ppGpp synthetase I, SpoT/RelA [Dehalogenimonas
           lykanthroporepellens BL-DC-9]
          Length = 733

 Score =  347 bits (891), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 198/488 (40%), Positives = 290/488 (59%), Gaps = 45/488 (9%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           YL P +L +++ A   A EAH GQ RRSGEP+I HP+ VA  L +L+LD  +IAA LLHD
Sbjct: 13  YLPPEKLNIIQAAYDFAAEAHQGQTRRSGEPYIEHPLAVAMELADLQLDTTAIAAALLHD 72

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKL---GKLKCKNENHSVQDVKADDLRQM 256
             ED+++     IEE+FG  V R+V+G TK++KL      + +   ++  + +A++LR+M
Sbjct: 73  VPEDSDI-PLAGIEEKFGPDVARLVDGVTKLAKLSLAAPGETRFSGNTTYERQAENLRKM 131

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM E++RV+ +KL+DRLHNMRTL  MP  KQ  IA ET++++APLA  LG+++IK +L
Sbjct: 132 LVAMAEDLRVVFIKLSDRLHNMRTLDAMPSEKQKDIARETMEIYAPLAHRLGIWEIKWQL 191

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF +     Y ++ R +A    + E+ + +   IL  + E+        +K E+   
Sbjct: 192 EDLSFRFLEPVRYKQLARLIAGKRAQREEFITKVINILKSEFEN------AGLKPEVNGR 245

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  +S+++   K        ++I  L  I           L +    CY  LG VH +W
Sbjct: 246 AKHIFSLHQKAEKYSAQGRHFDEIYDLLAI---------RVLVNTVNECYTALGAVHNLW 296

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            PIP +  DYIA PKPNGYQSLHT ++     +   LE+QIRT +M  +AE G+AAH+  
Sbjct: 297 HPIPGSFDDYIANPKPNGYQSLHTAVLSL---NGTPLEIQIRTYDMHRLAEYGVAAHW-- 351

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
                      + N RS        +N +   RISWL  + +W  +  G   + EF++++
Sbjct: 352 ---------RYKENERS------TSHNED---RISWLRQLVDWHRDLAG---AEEFLESV 390

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             D+   +VFVFTP GEIK+LPKGAT +D+AY +HTE+G++ V AKVNG LVS  + L N
Sbjct: 391 KTDIFNDQVFVFTPGGEIKDLPKGATPLDFAYRVHTELGHRCVGAKVNGKLVSLDYQLKN 450

Query: 617 AEVVEIIT 624
           AEVVEI+T
Sbjct: 451 AEVVEIVT 458


>gi|168333633|ref|ZP_02691893.1| (p)ppGpp synthetase I, SpoT/RelA [Epulopiscium sp. 'N.t. morphotype
           B']
          Length = 740

 Score =  347 bits (890), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 199/495 (40%), Positives = 301/495 (60%), Gaps = 59/495 (11%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           +Y   ++L ++ +A  +A  AH+GQ R+SGEP+IIHP+ VA+IL +LELD ESI AGLLH
Sbjct: 14  AYHPSDDLSMIEKAYDIASNAHNGQLRKSGEPYIIHPLGVAKILADLELDIESITAGLLH 73

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQ--DVKADDLRQM 256
           D VEDT++ T E IE  F   V  +V+G   V+KL ++K  + N  VQ  +++ ++ R+M
Sbjct: 74  DVVEDTSM-TLEDIELNFNKEVALLVDG---VTKLSQIKYHSTNKKVQKEELQVENYRKM 129

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
           F+AM +++RV+++KLADRLHNM+TL +M P KQ +IA ET+ ++AP+A  LG+ ++K+EL
Sbjct: 130 FIAMAQDIRVVLIKLADRLHNMQTLKYMIPEKQQAIARETMDIYAPIANRLGICKLKAEL 189

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LS  Y N+  Y  + + +A   K+ ++ +E  N+I++ KI ++  LD + +K  +   
Sbjct: 190 EDLSLRYINSNMYYYLVKTIA---KKRQERVEITNQIVV-KIRNE--LDKLGIKANVEGR 243

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  +SIYK ++    +I+++  +  +R I++              + CY VLG+ H I+
Sbjct: 244 PKHFFSIYKKLVNQNKTIDQIYDLFAVRAIVE------------DVKDCYGVLGVAHDIF 291

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTL-----IPFLYESMFRLEVQIRTEEMDLIAERGIA 491
           TPIP   KDYIA PKPN YQSLHTTL     +PF        E+QIRT EM   AE GIA
Sbjct: 292 TPIPGRFKDYIAMPKPNMYQSLHTTLMGPNGVPF--------ELQIRTMEMHRTAEYGIA 343

Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
           AH+                 +   GK   L       +++WL  I EWQ++   N    E
Sbjct: 344 AHW-----------------KYKEGKIEGLFQDTSEEKLAWLRQILEWQKDMSDN---EE 383

Query: 552 FVDTITRDL--LGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVS 609
           F+  I  DL     +V+VF+P+G++  +P GAT +D+AY IH++IGNKM  AKVN  +V+
Sbjct: 384 FISAIKVDLDIYTDQVYVFSPKGDLITIPTGATPIDFAYYIHSDIGNKMTGAKVNDKIVN 443

Query: 610 PTHVLANAEVVEIIT 624
               L N + +EI+T
Sbjct: 444 LDSTLKNGDRIEILT 458


>gi|312127055|ref|YP_003991929.1| (p)ppgpp synthetase i, spot/rela [Caldicellulosiruptor
           hydrothermalis 108]
 gi|311777074|gb|ADQ06560.1| (p)ppGpp synthetase I, SpoT/RelA [Caldicellulosiruptor
           hydrothermalis 108]
          Length = 722

 Score =  347 bits (890), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 200/505 (39%), Positives = 301/505 (59%), Gaps = 67/505 (13%)

Query: 128 ERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELEL 187
           ++L E +     Y S  ++ L+++A   A + HDGQ R SGEP+I+HP+EVA IL +LEL
Sbjct: 3   DKLNELIERVKKYASEEDINLIKKAFDFAQKYHDGQARNSGEPYIVHPLEVALILADLEL 62

Query: 188 DWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQD 247
           D  SI AGLLHD VEDT+  + E +E EFG  +  +V+G   V+KLGKL    E  S  +
Sbjct: 63  DIASIVAGLLHDVVEDTSA-SLEDVEREFGKEIADLVDG---VTKLGKL----EFTSKLE 114

Query: 248 VKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLL 307
            +A++ R+M +AM +++RVI++KLADRLHNMRTL ++PP KQ   A ET+ ++APLA  L
Sbjct: 115 RQAENYRKMLIAMAKDIRVILIKLADRLHNMRTLKYLPPEKQRQKAQETIDIYAPLAHRL 174

Query: 308 GMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLM 367
           G+ +IK ELE+LS  Y + E Y  +  ++A    E E+ +++   ++ +K+++       
Sbjct: 175 GISKIKWELEDLSLRYLDPEGYYDLVEKIAKKRVEREEYIKKIISLISEKLKE------- 227

Query: 368 TVKTEIRSVCKEP---YSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
               E+  +   P   YSIY+ + +   ++ E+  +  +RII+            +  + 
Sbjct: 228 -ANIEVGQIDGRPKHFYSIYRKMKQQGKTLEEIYDLFAIRIIV------------NSVKD 274

Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRT 479
           CY VLG++H ++ P+P   KDYIA PKPN YQSLHTT+I     PF        EVQIRT
Sbjct: 275 CYGVLGIIHTLFKPMPGRFKDYIAMPKPNMYQSLHTTVIGPEGEPF--------EVQIRT 326

Query: 480 EEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREW 539
            +M   AE GIAAH+  +             GR        + + +   + +WL  + EW
Sbjct: 327 FDMHRTAEYGIAAHWKYK------------EGR--------IKSTDEDEKFAWLRELLEW 366

Query: 540 QEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMV 599
           Q+E      ++EF++++  +L    VFVFTP+G++ +LP+G+T +D+AY IH+EIGNKM 
Sbjct: 367 QKEL---KDAKEFMESLKINLFSDEVFVFTPKGDVISLPQGSTPIDFAYAIHSEIGNKMA 423

Query: 600 AAKVNGNLVSPTHVLANAEVVEIIT 624
            AKVNG LV   + L N ++VEIIT
Sbjct: 424 GAKVNGKLVPIDYELKNGDIVEIIT 448


>gi|83590516|ref|YP_430525.1| (p)ppGpp synthetase SpoT/RelA [Moorella thermoacetica ATCC 39073]
 gi|83573430|gb|ABC19982.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA [Moorella
           thermoacetica ATCC 39073]
          Length = 717

 Score =  347 bits (890), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 203/499 (40%), Positives = 292/499 (58%), Gaps = 62/499 (12%)

Query: 132 EDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWE 190
           ++L   I    P+ +L+LVR A  LA  AH GQKRRSGE +I HP++VA IL EL+LD  
Sbjct: 4   QELEQQIRNYQPDADLKLVRDAYTLAATAHRGQKRRSGEDYITHPLQVAAILAELQLDVV 63

Query: 191 SIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKA 250
           +IAA LLHD VEDT V + + I+E FG  V  +V+G TK+S+L + K K E       +A
Sbjct: 64  TIAAALLHDVVEDTPV-SLDTIKELFGEEVALLVDGVTKLSRL-EYKTKEEQ------QA 115

Query: 251 DDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMY 310
           + LR+MFL M +++RVI++KLADRLHNMRTL + PP KQ  IA ETL++FAPLA  LG++
Sbjct: 116 ETLRKMFLTMAQDIRVILIKLADRLHNMRTLKYHPPEKQQEIARETLEIFAPLAHRLGIF 175

Query: 311 QIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVK 370
           ++K ELE+ S  Y   E Y ++   +    +E E+ + +   IL +K      LD   +K
Sbjct: 176 RLKWELEDQSLRYLEPERYYELVNSINMKRREREEYIRQVVDILRQK------LDEAGIK 229

Query: 371 TEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLG 430
            +I+   K  YSIY  ++K    ++E+  +  +R+I+               + CY VLG
Sbjct: 230 ADIQGRPKHFYSIYNKMVKQGKELSEIYDLIAVRVIV------------DTVKECYAVLG 277

Query: 431 LVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMDLI 485
           +VH IW PIP   KDY+A PKPN YQSLHTT+I     PF        E+QIRT EM   
Sbjct: 278 VVHAIWKPIPGRFKDYVAMPKPNMYQSLHTTVIGPNGDPF--------EIQIRTWEMHRT 329

Query: 486 AERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVG 545
           AE GIAAH+           +    G S R             +++WL  + +WQ E   
Sbjct: 330 AEYGIAAHWR----------YKEGGGTSDR---------EFEQKLTWLRQLLDWQREM-- 368

Query: 546 NMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNG 605
               REF++++  DL   RV+VFTP+G++  LP G+  +D+AY +HT++G++   A+VNG
Sbjct: 369 -RDPREFMESLRIDLFSDRVYVFTPKGDVVELPAGSVPIDFAYRVHTDVGHRCTGARVNG 427

Query: 606 NLVSPTHVLANAEVVEIIT 624
            +V   + L   ++VE++T
Sbjct: 428 RIVPLDYQLKTGDIVEVLT 446


>gi|229013624|ref|ZP_04170755.1| GTP pyrophosphokinase [Bacillus mycoides DSM 2048]
 gi|423598283|ref|ZP_17574283.1| GTP pyrophosphokinase [Bacillus cereus VD078]
 gi|423660754|ref|ZP_17635923.1| GTP pyrophosphokinase [Bacillus cereus VDM022]
 gi|423669987|ref|ZP_17645016.1| GTP pyrophosphokinase [Bacillus cereus VDM034]
 gi|423673809|ref|ZP_17648748.1| GTP pyrophosphokinase [Bacillus cereus VDM062]
 gi|228747683|gb|EEL97555.1| GTP pyrophosphokinase [Bacillus mycoides DSM 2048]
 gi|401236553|gb|EJR43010.1| GTP pyrophosphokinase [Bacillus cereus VD078]
 gi|401299114|gb|EJS04714.1| GTP pyrophosphokinase [Bacillus cereus VDM034]
 gi|401300795|gb|EJS06384.1| GTP pyrophosphokinase [Bacillus cereus VDM022]
 gi|401310175|gb|EJS15500.1| GTP pyrophosphokinase [Bacillus cereus VDM062]
          Length = 727

 Score =  347 bits (890), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 201/496 (40%), Positives = 291/496 (58%), Gaps = 50/496 (10%)

Query: 134 LRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIA 193
           L     YL+  ++ELV RA   A +AH  Q R+SGEP+IIHP++VA IL +L +D  +++
Sbjct: 13  LEKASQYLADEDIELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDPATVS 72

Query: 194 AGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDL 253
           AG LHD VEDT + T E IE EF   +  +V+G   V+KLGK+K K+  H  Q  +A++ 
Sbjct: 73  AGFLHDVVEDTEI-TLEDIEREFNKEIAMLVDG---VTKLGKIKYKS--HEQQ--QAENH 124

Query: 254 RQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIK 313
           R+MF+AM +++RVI++KLADRLHNMRTL H+P  KQ  IA ETL++FAPLA  LG+  IK
Sbjct: 125 RKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGISTIK 184

Query: 314 SELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEI 373
            ELE+ S  Y N + Y     R+ +L K    E EE    +M  I +   L  ++++ EI
Sbjct: 185 WELEDTSLRYLNPQQYY----RIVNLMKRKRAEREEYLDEVMTGIREK--LKEVSIQPEI 238

Query: 374 RSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVH 433
               K  YSIY+ +       NE+  +  +R+++            +  + CY VLG++H
Sbjct: 239 SGRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVV------------NSIKDCYAVLGIIH 286

Query: 434 GIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAH 493
             W P+P   KDYIA PK N YQSLHTT+I    +    LEVQIRT+EM  IAE GIAAH
Sbjct: 287 TCWKPMPGRFKDYIAMPKANLYQSLHTTVIGPKGDP---LEVQIRTKEMHEIAEFGIAAH 343

Query: 494 YSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFV 553
           +            A   G++            +  +++W   I EWQ E      + EF+
Sbjct: 344 W------------AYKEGKAAE------TTGTLEKKLTWFRQILEWQNE---ASNAEEFM 382

Query: 554 DTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHV 613
           +++  DL    VFVFTP+G++  LP G+  +D++Y +H+EIGNK + AKVNG +V+  + 
Sbjct: 383 ESLKIDLFSDMVFVFTPKGDVMELPLGSVPIDFSYRVHSEIGNKTIGAKVNGKMVTLDYK 442

Query: 614 LANAEVVEIITYNVSF 629
           L   +++EI+T   S+
Sbjct: 443 LKTGDIIEILTSKHSY 458


>gi|410456899|ref|ZP_11310748.1| GTP pyrophosphokinase [Bacillus bataviensis LMG 21833]
 gi|409927039|gb|EKN64186.1| GTP pyrophosphokinase [Bacillus bataviensis LMG 21833]
          Length = 731

 Score =  347 bits (890), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 196/493 (39%), Positives = 298/493 (60%), Gaps = 50/493 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YL+   +ELV +A   A  AH  Q R+SGEP+IIHP++VA IL +LE+D  ++AAG 
Sbjct: 16  TRKYLNEEHVELVSKAYEYAKHAHREQYRKSGEPYIIHPIQVAGILADLEMDPATVAAGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDTN+ + + IEE F   V  +V+G   V+KLGK K K    S ++ +A++ R+M
Sbjct: 76  LHDVVEDTNI-SLKDIEEAFNDEVAMLVDG---VTKLGKFKYK----SHEEQQAENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
           F+AM +++RVI++KLADRLHNMRTL H+P  KQ  I+ ETL++FAPLA  LG+ +IK EL
Sbjct: 128 FVAMAQDIRVILIKLADRLHNMRTLKHLPVEKQRRISNETLEIFAPLAHRLGISKIKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+ +  Y N + Y     R+ +L K+   E E+  + ++  +E    +  +++K E+   
Sbjct: 188 EDTALRYLNPQQYY----RIVNLMKKKRAEREQYLEDVI--VEVKARMGEVSIKAELSGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSIY+ ++      +E+  +  +RI++            +  + CY VLG++H  W
Sbjct: 242 PKHIYSIYRKMVLQNKQFSEIYDLLAVRIVV------------NSIKDCYAVLGIIHTCW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA PKPN YQSLHTT+I    +    LEVQIRT EM  IAE G+AAH++ 
Sbjct: 290 KPMPGRFKDYIAMPKPNMYQSLHTTVIGPKGDP---LEVQIRTYEMHRIAEFGVAAHWAY 346

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +                  GKT+  +++    +++W   I E+Q +      + EF++++
Sbjct: 347 K-----------------EGKTIS-DSSTFEQKLTWFREILEFQND---TANAEEFMESL 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             DL    VF+FTP+G++  LP G+  +D+AY IH+EIGNK + AKVNG +V+  + L  
Sbjct: 386 KIDLFSDMVFIFTPKGDVIELPSGSVPIDFAYRIHSEIGNKTIGAKVNGKMVTLDYRLKT 445

Query: 617 AEVVEIITYNVSF 629
            +++EI+T   S+
Sbjct: 446 GDIIEILTSKHSY 458


>gi|163942157|ref|YP_001647041.1| (p)ppGpp synthetase I SpoT/RelA [Bacillus weihenstephanensis KBAB4]
 gi|229135230|ref|ZP_04264029.1| GTP pyrophosphokinase [Bacillus cereus BDRD-ST196]
 gi|229169150|ref|ZP_04296865.1| GTP pyrophosphokinase [Bacillus cereus AH621]
 gi|423368453|ref|ZP_17345885.1| GTP pyrophosphokinase [Bacillus cereus VD142]
 gi|423489585|ref|ZP_17466267.1| GTP pyrophosphokinase [Bacillus cereus BtB2-4]
 gi|423495308|ref|ZP_17471952.1| GTP pyrophosphokinase [Bacillus cereus CER057]
 gi|423497898|ref|ZP_17474515.1| GTP pyrophosphokinase [Bacillus cereus CER074]
 gi|423519105|ref|ZP_17495586.1| GTP pyrophosphokinase [Bacillus cereus HuA2-4]
 gi|423591601|ref|ZP_17567632.1| GTP pyrophosphokinase [Bacillus cereus VD048]
 gi|163864354|gb|ABY45413.1| (p)ppGpp synthetase I, SpoT/RelA [Bacillus weihenstephanensis
           KBAB4]
 gi|228614378|gb|EEK71488.1| GTP pyrophosphokinase [Bacillus cereus AH621]
 gi|228648272|gb|EEL04308.1| GTP pyrophosphokinase [Bacillus cereus BDRD-ST196]
 gi|401080780|gb|EJP89064.1| GTP pyrophosphokinase [Bacillus cereus VD142]
 gi|401151401|gb|EJQ58853.1| GTP pyrophosphokinase [Bacillus cereus CER057]
 gi|401160160|gb|EJQ67539.1| GTP pyrophosphokinase [Bacillus cereus HuA2-4]
 gi|401161185|gb|EJQ68552.1| GTP pyrophosphokinase [Bacillus cereus CER074]
 gi|401231734|gb|EJR38236.1| GTP pyrophosphokinase [Bacillus cereus VD048]
 gi|402431821|gb|EJV63885.1| GTP pyrophosphokinase [Bacillus cereus BtB2-4]
          Length = 727

 Score =  347 bits (890), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 201/496 (40%), Positives = 291/496 (58%), Gaps = 50/496 (10%)

Query: 134 LRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIA 193
           L     YL+  ++ELV RA   A +AH  Q R+SGEP+IIHP++VA IL +L +D  +++
Sbjct: 13  LEKASQYLADGDIELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDPATVS 72

Query: 194 AGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDL 253
           AG LHD VEDT + T E IE EF   +  +V+G   V+KLGK+K K+  H  Q  +A++ 
Sbjct: 73  AGFLHDVVEDTEI-TLEDIEREFNKEIAMLVDG---VTKLGKIKYKS--HEQQ--QAENH 124

Query: 254 RQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIK 313
           R+MF+AM +++RVI++KLADRLHNMRTL H+P  KQ  IA ETL++FAPLA  LG+  IK
Sbjct: 125 RKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGISTIK 184

Query: 314 SELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEI 373
            ELE+ S  Y N + Y     R+ +L K    E EE    +M  I +   L  ++++ EI
Sbjct: 185 WELEDTSLRYLNPQQYY----RIVNLMKRKRAEREEYLDEVMTGIREK--LKEVSIQPEI 238

Query: 374 RSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVH 433
               K  YSIY+ +       NE+  +  +R+++            +  + CY VLG++H
Sbjct: 239 SGRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVV------------NSIKDCYAVLGIIH 286

Query: 434 GIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAH 493
             W P+P   KDYIA PK N YQSLHTT+I    +    LEVQIRT+EM  IAE GIAAH
Sbjct: 287 TCWKPMPGRFKDYIAMPKANLYQSLHTTVIGPKGDP---LEVQIRTKEMHEIAEFGIAAH 343

Query: 494 YSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFV 553
           +            A   G++            +  +++W   I EWQ E      + EF+
Sbjct: 344 W------------AYKEGKAAE------TTGTLEKKLTWFRQILEWQNE---ASNAEEFM 382

Query: 554 DTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHV 613
           +++  DL    VFVFTP+G++  LP G+  +D++Y +H+EIGNK + AKVNG +V+  + 
Sbjct: 383 ESLKIDLFSDMVFVFTPKGDVMELPLGSVPIDFSYRVHSEIGNKTIGAKVNGKMVTLDYK 442

Query: 614 LANAEVVEIITYNVSF 629
           L   +++EI+T   S+
Sbjct: 443 LKTGDIIEILTSKHSY 458


>gi|291518572|emb|CBK73793.1| (p)ppGpp synthetase, RelA/SpoT family [Butyrivibrio fibrisolvens
           16/4]
          Length = 767

 Score =  347 bits (890), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 200/509 (39%), Positives = 301/509 (59%), Gaps = 66/509 (12%)

Query: 126 SPERLWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
           +P+ L+++L   +    PN ++ ++ +  ++A  AH+GQ R+SGEP+IIHP+ VA IL +
Sbjct: 31  NPDELYKELIERVRKYHPNTDISMIEKGYLIARNAHEGQCRKSGEPYIIHPLCVAIILAD 90

Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
           LELD E+I AGLLHD VEDT + T E I +EF   V  +V+G   V+KLG+L   N +  
Sbjct: 91  LELDKETIVAGLLHDVVEDT-ICTKEEIAQEFSEEVAELVDG---VTKLGQL---NYDAD 143

Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
             +++A++LR+MFLAM +++RVI++KLADRLHNMRTL +M P KQ   A ET++++APLA
Sbjct: 144 KVEIQAENLRKMFLAMAKDIRVILIKLADRLHNMRTLKYMTPEKQKEKARETMEIYAPLA 203

Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDD--Q 362
           + LG+ ++K EL++LS  Y   + Y  +  ++A L K    +        +  + DD  +
Sbjct: 204 QRLGISKVKIELDDLSLKYLEPDAYYDLVEKIA-LRKSQRTD-------YINSLVDDVRK 255

Query: 363 FLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQ 422
            +D   ++ E+    K  +SIYK ++    +I+++  +  +RII+               
Sbjct: 256 HIDAAEIQAEVYGRAKHFFSIYKKMVNQHKTIDQIYDLFAVRIIV------------DSI 303

Query: 423 QICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQI 477
           + CY  LG++H ++TPIP   KDYIA PKPN YQSLHTT+I     PF        E+QI
Sbjct: 304 KDCYAALGVIHEMYTPIPGRFKDYIAMPKPNMYQSLHTTVIGPNGAPF--------EIQI 355

Query: 478 RTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIR 537
           RT +M   +E GIAAH+  +               S  G +V         ++SWL  I 
Sbjct: 356 RTYDMHRTSEYGIAAHWKYK--------------ESGEGSSVVGEEE----KLSWLREIL 397

Query: 538 EWQEEFVGNMTSREFVDTITRD--LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIG 595
           EWQ+E   N   +EF   +  D  L    VF FTP G++KNLP G+T +D+AY IH+ +G
Sbjct: 398 EWQQEISDN---KEFSSLLKSDLNLFSDTVFCFTPSGDVKNLPNGSTPIDFAYSIHSAVG 454

Query: 596 NKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
           N+M+ AKVNG LV   +V+ N + +EI+T
Sbjct: 455 NRMIGAKVNGKLVPIDYVIQNGDRIEIVT 483


>gi|452995059|emb|CCQ93294.1| GTP pyrophosphokinase (RelA/SpoT) [Clostridium ultunense Esp]
          Length = 723

 Score =  347 bits (890), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 199/491 (40%), Positives = 295/491 (60%), Gaps = 49/491 (9%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y+S +EL++VR+A + A +AH+GQ R SG+P+I HP+ VA IL +L +D   ++A LLHD
Sbjct: 13  YMSDDELDMVRKAYLFAEKAHEGQLRASGDPYITHPLAVAGILADLHMDHVILSAALLHD 72

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            VEDT+  T +++ +EFG  V  +V+G   V+KL ++K K++    ++ +A++ R+M LA
Sbjct: 73  VVEDTHA-TLDQVRQEFGVEVAELVDG---VTKLRRIKYKSQ----EEQQAENHRKMLLA 124

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M ++VRVI++KLADRLHNMRTL +     Q  IA ETL++FAP+A  LG+  IK ELE++
Sbjct: 125 MAKDVRVILIKLADRLHNMRTLKYRSEEDQRRIANETLEIFAPIAHRLGISTIKWELEDI 184

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           S  Y N + Y ++   +     E EK +E+  + +  K+ED      + +K +I    K 
Sbjct: 185 SLRYINPQQYYRIVHLMKKKRAEREKYIEKVMEEIRVKLED------LGIKCDISGRPKH 238

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIY+ +       NE+  +  +RII++              + CY VLG+VH +W P+
Sbjct: 239 IYSIYRKMFLQHKEFNEIYDLLAIRIIVE------------NVRDCYAVLGVVHTLWKPM 286

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK N YQSLHTT+I    E    LEVQIRT+EM   AE GIAAH++ +  
Sbjct: 287 PGRFKDYIAMPKANLYQSLHTTVIGPEGEP---LEVQIRTQEMHRTAEYGIAAHWAYK-- 341

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
                           GK +  N+     R+SW   + E+Q+E   +  ++EFV+++  D
Sbjct: 342 ---------------EGKRLKGNDKYGEQRLSWFRELLEYQQE---SRDAQEFVESLKMD 383

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           L    VFVFTP+G++  LP G+  +D+AY IHTEIGN+ V AKVNG +V   H L   ++
Sbjct: 384 LFSDLVFVFTPKGDVIELPAGSVPLDFAYRIHTEIGNRCVGAKVNGKIVPLDHPLKTGDI 443

Query: 620 VEIITYNVSFS 630
           VEI+T   S+ 
Sbjct: 444 VEILTSKHSYG 454


>gi|386714927|ref|YP_006181250.1| GTP pyrophosphokinase [Halobacillus halophilus DSM 2266]
 gi|384074483|emb|CCG45976.1| GTP pyrophosphokinase [Halobacillus halophilus DSM 2266]
          Length = 734

 Score =  347 bits (889), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 196/491 (39%), Positives = 287/491 (58%), Gaps = 50/491 (10%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           +YL+ ++L  +RRA   A EAH  Q R+SGEP+IIHP++VA IL  LE+D E+IA G LH
Sbjct: 18  TYLNEDDLAFIRRAYQFAEEAHSDQFRKSGEPYIIHPIQVAGILVNLEMDPETIAGGFLH 77

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT V + E IE+ F   V  +V+G   V+KLGK+K K    S +  +A++ R+MF+
Sbjct: 78  DVVEDTEV-SIEEIEKAFNTEVSMLVDG---VTKLGKIKYK----SKEAQQAENHRKMFV 129

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM +++RVI++KLADRLHNMRTL H+P  KQ  I+ ETL++FAPLA  LG+  IK ELE+
Sbjct: 130 AMAKDIRVILIKLADRLHNMRTLKHLPAEKQRRISNETLEIFAPLAHRLGISTIKWELED 189

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
            +  Y N + Y ++   +     E E  +EE    +  +++D      + +  ++    K
Sbjct: 190 TALRYLNPQQYYRIVHLMKQKRNEREHYIEEVIDEIRSQLKD------VNIDADLNGRPK 243

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIY+ ++      NE+  +  +RI +            +  + CY VLG++H  W P
Sbjct: 244 HLYSIYRKMVLQNKQFNEIYDLLAVRITV------------NSIKDCYAVLGIIHTCWKP 291

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PKPN YQSLHTT+I    +    LEVQIRT +M  IAE GIAAH+    
Sbjct: 292 MPGRFKDYIAMPKPNLYQSLHTTVIGPKGDP---LEVQIRTHDMHEIAEYGIAAHW---- 344

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                   A   GR    +       +   +++W   I EWQ E      + EF++++  
Sbjct: 345 --------AYKEGRQSTAE------QSFEEKLTWFREILEWQSE---THDAEEFMESLKV 387

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           DL    V+VFTP+G++  LP G+  +D+AY IHTE+GN+ + AKVNG +    +VL   +
Sbjct: 388 DLFSDMVYVFTPKGDVIELPSGSVPIDFAYRIHTEVGNQTIGAKVNGKMEPLDYVLNTGD 447

Query: 619 VVEIITYNVSF 629
           ++EI+T   S+
Sbjct: 448 ILEIMTSKHSY 458


>gi|302872388|ref|YP_003841024.1| (p)ppGpp synthetase I SpoT/RelA [Caldicellulosiruptor obsidiansis
           OB47]
 gi|302575247|gb|ADL43038.1| (p)ppGpp synthetase I, SpoT/RelA [Caldicellulosiruptor obsidiansis
           OB47]
          Length = 722

 Score =  347 bits (889), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 201/505 (39%), Positives = 300/505 (59%), Gaps = 67/505 (13%)

Query: 128 ERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELEL 187
           +RL E +     Y S  +++L+++A   A + H+GQ R SGEP+I+HP+EVA IL +LEL
Sbjct: 3   DRLNELIERVKRYASEEDIDLIKKAFEFAQKYHEGQARSSGEPYIVHPLEVALILADLEL 62

Query: 188 DWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQD 247
           D  SI AGLLHD VEDT+  + E IE EFG  +  +V+G   V+KLGKL    E  S  +
Sbjct: 63  DIASIVAGLLHDVVEDTSA-SLEDIEREFGKEIAELVDG---VTKLGKL----EFTSKLE 114

Query: 248 VKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLL 307
            +A++ R+M +AM +++RVI++KLADRLHNMRTL ++PP KQ   A ET+ ++APL   L
Sbjct: 115 RQAENYRKMLIAMAKDIRVILIKLADRLHNMRTLKYLPPEKQRQKAQETIDIYAPLVHRL 174

Query: 308 GMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLM 367
           G+ +IK ELE+LS  Y + E Y  +  ++A    E E+ ++    ++ +K+++       
Sbjct: 175 GISKIKWELEDLSLRYLDPEGYYDLVEKIAKKRVEREEYIKRIISLISEKLKE------- 227

Query: 368 TVKTEIRSVCKEP---YSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
               E+  +   P   YSIY+ + +   ++ E+  +  +RII+            +  + 
Sbjct: 228 -ANIEVGQIDGRPKHFYSIYRKMKEQGKTLEEIYDLFAIRIIV------------NSVKD 274

Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRT 479
           CY VLG++H ++ P+P   KDYIA PKPN YQSLHTT+I     PF        EVQIRT
Sbjct: 275 CYGVLGIIHTLFKPMPGRFKDYIAMPKPNMYQSLHTTVIGPEGEPF--------EVQIRT 326

Query: 480 EEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREW 539
            +M   AE GIAAH+  +             GR        + + +   + +WL  + EW
Sbjct: 327 FDMHRTAEYGIAAHWKYK------------EGR--------IKSTDEDEKFAWLRELLEW 366

Query: 540 QEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMV 599
           Q+E      ++EF++++  +L    VFVFTP+G++ NLP+G+T +D+AY IH+EIGNKM 
Sbjct: 367 QKEL---KDAKEFMESLKINLFSDEVFVFTPKGDVINLPQGSTPIDFAYAIHSEIGNKMA 423

Query: 600 AAKVNGNLVSPTHVLANAEVVEIIT 624
            AKVNG LV   + L N ++VEIIT
Sbjct: 424 GAKVNGKLVPIDYELKNGDIVEIIT 448


>gi|218246275|ref|YP_002371646.1| (p)ppGpp synthetase I SpoT/RelA [Cyanothece sp. PCC 8801]
 gi|257059322|ref|YP_003137210.1| (p)ppGpp synthetase I SpoT/RelA [Cyanothece sp. PCC 8802]
 gi|218166753|gb|ACK65490.1| (p)ppGpp synthetase I, SpoT/RelA [Cyanothece sp. PCC 8801]
 gi|256589488|gb|ACV00375.1| (p)ppGpp synthetase I, SpoT/RelA [Cyanothece sp. PCC 8802]
          Length = 743

 Score =  347 bits (889), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 202/480 (42%), Positives = 284/480 (59%), Gaps = 47/480 (9%)

Query: 145 ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDT 204
           E+ L+ RA   A++ H+GQ R+SGEP+I HP+ VA +L +L  D   IAAG LHD VEDT
Sbjct: 35  EISLICRAFNFAYQLHEGQYRKSGEPYIAHPIAVAGLLRDLGGDKAMIAAGFLHDVVEDT 94

Query: 205 NVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEV 264
           +V T E+IEE FG+ VR++VEG TK+SK      K E+      +A++ R+MFLAM +++
Sbjct: 95  DV-TVEQIEENFGSEVRQLVEGVTKLSKFN-FSSKTEH------QAENFRRMFLAMAKDI 146

Query: 265 RVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYT 324
           RVI+VKLADRLHNMRTL H+ P KQ  IA ET ++FAPLA  LG+++ K ELE+LSF Y 
Sbjct: 147 RVIVVKLADRLHNMRTLEHLKPEKQERIARETKEIFAPLANRLGIWRFKWELEDLSFKYL 206

Query: 325 NAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIY 384
             E Y +++  VA+   + E  LE   ++L +++   Q + +  V  E++   K  Y IY
Sbjct: 207 EPEAYREIQSLVAEKRSDRETRLETIKEMLRQRL---QKIGVQVV--ELQGRPKHLYGIY 261

Query: 385 KAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMK 444
             + + +   N++  IA LRII+K              + CY  L +VH  + PIP   K
Sbjct: 262 HKMQRQQKGFNQIYDIAALRIIVKNN------------EDCYRALAVVHDAFKPIPGRFK 309

Query: 445 DYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLV 504
           DYI  PKPN YQSLHTT++         LEVQIRT EM  IAE GIAAH+  +   TG  
Sbjct: 310 DYIGLPKPNRYQSLHTTVVGLTGRP---LEVQIRTLEMHHIAEYGIAAHWKYK--ETGGS 364

Query: 505 GHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSR 564
            H   +                  + +WL  + EWQ++      ++E+VDT+  +L    
Sbjct: 365 DHTELSEEDE--------------KFTWLRQLLEWQKDL---QDAQEYVDTLKDNLFDDD 407

Query: 565 VFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
           V+VFTP+G++  L +G+T VD+AY IHTE+GN M  A++N         L N ++VEIIT
Sbjct: 408 VYVFTPQGDVVALARGSTPVDFAYRIHTEVGNHMKGARINEKWSVLDTPLHNGDIVEIIT 467


>gi|390934796|ref|YP_006392301.1| (p)ppGpp synthetase I SpoT/RelA [Thermoanaerobacterium
           saccharolyticum JW/SL-YS485]
 gi|389570297|gb|AFK86702.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacterium
           saccharolyticum JW/SL-YS485]
          Length = 718

 Score =  347 bits (889), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 196/488 (40%), Positives = 297/488 (60%), Gaps = 62/488 (12%)

Query: 142 SPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTV 201
           S N++ L+ +A   A +AH GQ R SGEP+I+HPVEVA IL +LELD  +IA+GLLHD +
Sbjct: 15  SENDINLILKAYDYAVKAHKGQYRNSGEPYIVHPVEVAMILADLELDVSTIASGLLHDVI 74

Query: 202 EDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMT 261
           EDT++ T+E I+ EFG  +  +V+G   V+KLG ++ K    S  + +A+++R+M +AM 
Sbjct: 75  EDTSI-TYEDIKNEFGQEIADLVDG---VTKLGMIEYK----SKVEQQAENMRKMLIAMA 126

Query: 262 EEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSF 321
           +++RVI++KLADRLHNMRTL  +   KQ   A ETL+++AP+A  LGM  IK ELE+LS 
Sbjct: 127 KDIRVIMIKLADRLHNMRTLKFLSEEKQKEKAQETLEIYAPIAHRLGMSMIKWELEDLSL 186

Query: 322 MYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPY 381
            Y + ++Y  +  +VA   KE E+ ++E    L++K+++   L+ + +K ++    K  Y
Sbjct: 187 RYLHPDEYYSLVEKVAKKRKEREESIKE----LIEKLKEK--LNEIGIKADVDGRPKHFY 240

Query: 382 SIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPR 441
           SIYK + +   +  ++  +  +R+I+            +  + CY  LG+VH +W P+P 
Sbjct: 241 SIYKKMKQQNKTFEQIYDLMAVRVIV------------NTVKDCYGTLGVVHTLWKPMPG 288

Query: 442 AMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
             KDYIA PKPN YQSLHTT+I     PF        E+QIRT +M   AE GIAAH+  
Sbjct: 289 RFKDYIAMPKPNMYQSLHTTVIGPKGEPF--------EIQIRTWDMHRTAEYGIAAHW-- 338

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
                          +   GK+          ++SWL  + EWQ E      ++EF++T+
Sbjct: 339 ---------------KYKEGKSY---EDEFDAKLSWLRQLLEWQREL---KDAKEFMETL 377

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             DL    V+VFTP+G++ +LP G+T +D+AY IHTEIG+++  AKVNG +V   + L N
Sbjct: 378 KIDLFTDEVYVFTPKGDVISLPAGSTPIDFAYSIHTEIGHRLNGAKVNGKIVPIDYELKN 437

Query: 617 AEVVEIIT 624
            ++VEI+T
Sbjct: 438 GDIVEILT 445


>gi|398311619|ref|ZP_10515093.1| GTP pyrophosphokinase RelA/SpoT [Bacillus mojavensis RO-H-1]
          Length = 734

 Score =  347 bits (889), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 197/491 (40%), Positives = 292/491 (59%), Gaps = 50/491 (10%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           SYLS   +  V +A + A +AH  Q R+SGEP+IIHP++VA IL +LE+D  +IA G LH
Sbjct: 18  SYLSDEHIAFVEKAYLYAEDAHREQYRKSGEPYIIHPIQVAGILVDLEMDPSTIAGGFLH 77

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT+V T + ++E F   V  +V+G   V+KLGK+K K    S ++ +A++ R+MF+
Sbjct: 78  DVVEDTDV-TLDDLKEAFSEEVAMLVDG---VTKLGKIKYK----SQEEQQAENHRKMFV 129

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM +++RVI++KLADRLHNMRTL H+P  KQ  I+ ETL++FAPLA  LG+ +IK ELE+
Sbjct: 130 AMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRISNETLEIFAPLAHRLGISKIKWELED 189

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
            +  Y N + Y ++   +     E E  ++E    + K++E+      + +K +     K
Sbjct: 190 TALRYLNPQQYYRIVNLMKKKRAERELYVDEVVNEVKKRVEE------VNIKADFSGRPK 243

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIY+ ++      NE+  +  +RI            L +  + CY VLG++H  W P
Sbjct: 244 HIYSIYRKMVLQNKQFNEIYDLLAVRI------------LVNSIKDCYAVLGIIHTCWKP 291

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PKPN YQSLHTT+I    +    LEVQIRT EM  IAE G+AAH++ + 
Sbjct: 292 MPGRFKDYIAMPKPNMYQSLHTTVIGPKGDP---LEVQIRTFEMHEIAEYGVAAHWAYK- 347

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                            GK     +A    ++SW   I E+Q E   +  + EF++++  
Sbjct: 348 ----------------EGKAAS-ESATFEKKLSWFREILEFQNE---STDAEEFMESLKI 387

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           DL    V+VFTP+G++  LP G+  +D++Y IH+EIGNK + AKVNG +V+  H L   +
Sbjct: 388 DLFSDMVYVFTPKGDVIELPSGSVPIDFSYRIHSEIGNKTIGAKVNGKMVTLDHKLRTGD 447

Query: 619 VVEIITYNVSF 629
           +VEI+T   S+
Sbjct: 448 IVEILTSKHSY 458


>gi|329121021|ref|ZP_08249652.1| GTP diphosphokinase [Dialister micraerophilus DSM 19965]
 gi|327471183|gb|EGF16637.1| GTP diphosphokinase [Dialister micraerophilus DSM 19965]
          Length = 783

 Score =  347 bits (889), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 197/501 (39%), Positives = 292/501 (58%), Gaps = 54/501 (10%)

Query: 124 EDSPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILG 183
           ED+ ++L   ++  IS  + +++  +++A  LA +AH GQKR +GEP+I HP+ VA IL 
Sbjct: 59  EDAYKKLINRVKKYIS--NQDDINFIKKAFELANKAHSGQKRATGEPYIFHPLSVAYILS 116

Query: 184 ELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENH 243
           ELELD  +I A LLHD  EDT+  T E IE +FG  +  +V+G   V+KL + K KN+  
Sbjct: 117 ELELDRNAIVAALLHDVAEDTDT-TLEDIENQFGKEIAFLVDG---VTKLSQFKYKNK-- 170

Query: 244 SVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPL 303
             +D + ++ ++MFLAM E+VRV+I+KLADRLHNMRTL      K+  +A ET++++APL
Sbjct: 171 --EDQQLENFQKMFLAMAEDVRVVIIKLADRLHNMRTLWVFRKEKRQRVAKETIEIYAPL 228

Query: 304 AKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQF 363
           A  LG+Y IK ELE+L F Y   EDY  +  ++ +  +  E  +E+   +L +KI     
Sbjct: 229 AHRLGIYNIKWELEDLCFHYLYPEDYYDLVSQMREKRQVREAIVEDTMHVLKEKI----- 283

Query: 364 LDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQ 423
            D   +K  I    K  YSIYK + +    ++++  +  +R+I+   P            
Sbjct: 284 -DETNIKAVITGRPKHFYSIYKKMKRDNRELSQIYDLYAVRVIVDTIPQ----------- 331

Query: 424 ICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMD 483
            CY VLG+VH +W P+P+  KDYIA PKPN YQSLHTT+I    +    +E+QIRT EM 
Sbjct: 332 -CYAVLGIVHSLWKPLPKRFKDYIAVPKPNMYQSLHTTIIGTKGQP---VEIQIRTWEMH 387

Query: 484 LIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEF 543
            ++E GIAAH+                 R   G +   N+     +I WL  I EWQ+  
Sbjct: 388 HVSEYGIAAHW-----------------RYKEGNSN--NSQKFDSKIGWLRRILEWQD-- 426

Query: 544 VGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKV 603
                 +E ++ +  D+    VFVFTP+G++ NLPKG+T +D+AY IHT++GN  V AK+
Sbjct: 427 --TENPKELMNAVKLDVFSDEVFVFTPKGDVINLPKGSTSIDFAYRIHTDVGNHCVGAKI 484

Query: 604 NGNLVSPTHVLANAEVVEIIT 624
           N  +V     L N ++V I+T
Sbjct: 485 NNKIVPLETKLKNGDIVSIVT 505


>gi|323702158|ref|ZP_08113825.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfotomaculum nigrificans DSM
           574]
 gi|333924436|ref|YP_004498016.1| (p)ppGpp synthetase I SpoT/RelA [Desulfotomaculum carboxydivorans
           CO-1-SRB]
 gi|323532845|gb|EGB22717.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfotomaculum nigrificans DSM
           574]
 gi|333749997|gb|AEF95104.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfotomaculum carboxydivorans
           CO-1-SRB]
          Length = 723

 Score =  347 bits (889), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 198/499 (39%), Positives = 298/499 (59%), Gaps = 52/499 (10%)

Query: 130 LWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDW 189
           L+E  +  + Y    ++  +R+A   A  AH GQKR SGE +I+HP+ +A IL EL+LD 
Sbjct: 4   LFELEQKILLYNPSADIAFLRKAYNFAENAHRGQKRISGEDYIVHPLAIAIILAELQLDI 63

Query: 190 ESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVK 249
           +++AAGLLHD VEDT V T   IE  FG+ V R+V+G   V+KLGKL+ +    S ++ +
Sbjct: 64  KTVAAGLLHDVVEDTGV-TLADIENNFGSEVARMVDG---VTKLGKLQFQ----SREERQ 115

Query: 250 ADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGM 309
           A++LR+MFLAM +++RVI++KLADRLHN+RTL      KQ  +A ETL  FAPLA  LG+
Sbjct: 116 AENLRKMFLAMAKDIRVILIKLADRLHNLRTLQFQSERKQKEVAEETLVFFAPLAHRLGI 175

Query: 310 YQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTV 369
           Y+IK ELE+LSF Y   E Y  +K ++A    + E+ ++E  ++L +K      L+ + +
Sbjct: 176 YKIKWELEDLSFRYKEPEQYQHLKMQIAKTRAKREEYIQEVIRLLAEK------LNAVNI 229

Query: 370 KTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVL 429
           + EI+   K  YSIY+ +++ +  + ++  +  +R+            L    + CY  L
Sbjct: 230 RAEIQGRPKNLYSIYQKMVEQQKELKDIFDVQAVRV------------LVDTVKDCYGAL 277

Query: 430 GLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERG 489
           G+ H +W PIP   KDYIA PK N YQSLHTT+I    E    +E+QIRT +M  +AE G
Sbjct: 278 GIAHTLWKPIPGRFKDYIAMPKSNMYQSLHTTVIGPNGEP---VEIQIRTWDMHRVAEYG 334

Query: 490 IAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTS 549
           IAAH+    +  G  G                 + ++  +++WL  + ++Q +      +
Sbjct: 335 IAAHWK---YKEGKQG-----------------DQDLDKKLAWLRQMMDFQHD---ARDA 371

Query: 550 REFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVS 609
           REF++ +  DL    VFVFTP+G++  LP GAT +D+AY IHT++G++ V AKVNG +V 
Sbjct: 372 REFMENLKIDLFSQSVFVFTPKGDVMELPAGATPLDFAYRIHTDVGHRTVGAKVNGRIVP 431

Query: 610 PTHVLANAEVVEIITYNVS 628
             + L N  ++EIIT   S
Sbjct: 432 LDYKLKNGNIIEIITSKAS 450


>gi|383753776|ref|YP_005432679.1| putative GTP diphosphokinase [Selenomonas ruminantium subsp.
           lactilytica TAM6421]
 gi|381365828|dbj|BAL82656.1| putative GTP diphosphokinase [Selenomonas ruminantium subsp.
           lactilytica TAM6421]
          Length = 739

 Score =  346 bits (888), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 205/502 (40%), Positives = 297/502 (59%), Gaps = 50/502 (9%)

Query: 123 KEDSPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARIL 182
           K+ +P  +   L+   SY    ++ L+R+A  LA EAH GQ R SGE +IIHP+ VA IL
Sbjct: 4   KDKAPVTIDSILQAVQSYEPKADVALIRKAYDLAVEAHKGQVRVSGEEYIIHPLHVAEIL 63

Query: 183 GELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNEN 242
            EL +D  +I+A LLHD VEDT + T E+IEE FG  V  IV+G   V+KLG++K K   
Sbjct: 64  TELHIDDVTISAALLHDVVEDT-LYTKEQIEEMFGEEVAMIVDG---VTKLGRIKYK--- 116

Query: 243 HSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAP 302
            S ++V+ ++ R+MFLAM +++RVI+VKLADRLHNMRTL +M   KQ  IA ET++++AP
Sbjct: 117 -SKEEVQLENYRKMFLAMAKDIRVIMVKLADRLHNMRTLKYMREDKQKRIAKETIEIYAP 175

Query: 303 LAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQ 362
           LA  LG+  IK ELE+L   Y   E Y  +   V    KE +  ++ A + +  KI +  
Sbjct: 176 LANRLGISNIKWELEDLCLRYLEPEKYYDLVENVKQKRKERQAFIDTAIEQIETKIGE-- 233

Query: 363 FLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQ 422
                 +K EI+   K  YSIYK +L+ +  I+E+  ++ +R++++              
Sbjct: 234 ----AGIKAEIKGRAKHFYSIYKKMLRDKKDISEIYDLSAIRVLVE------------SV 277

Query: 423 QICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEM 482
           + CY VLG++H +W PIP   KDYIA PK NGYQSLHTT++   Y     LE+QIRT  M
Sbjct: 278 RDCYGVLGVIHAMWKPIPGRFKDYIAMPKSNGYQSLHTTVMTRGYP----LEIQIRTFHM 333

Query: 483 DLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEE 542
             ++E G+AAH+             + NG   +G T       +  +++WL  +   Q+E
Sbjct: 334 HEVSEFGVAAHWK-----------YKENG---KGSTA---GGAMDQKMNWLRQMVSLQQE 376

Query: 543 FVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAK 602
                  +E+ + +  D+    VFVFTP+G++ +LPKG+  +D+AY IHTE+G+  V AK
Sbjct: 377 L---SDPKEYFEALKVDIFSDEVFVFTPKGDVVDLPKGSIPIDFAYRIHTEVGHHCVGAK 433

Query: 603 VNGNLVSPTHVLANAEVVEIIT 624
           VNG LV   H L N ++V IIT
Sbjct: 434 VNGKLVPLEHKLKNGDIVSIIT 455


>gi|300856534|ref|YP_003781518.1| GTP pyrophosphokinase [Clostridium ljungdahlii DSM 13528]
 gi|300436649|gb|ADK16416.1| GTP pyrophosphokinase [Clostridium ljungdahlii DSM 13528]
          Length = 725

 Score =  346 bits (888), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 201/483 (41%), Positives = 286/483 (59%), Gaps = 64/483 (13%)

Query: 147 ELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNV 206
           ++V +A   A EAH  QKR SGEP+I HPVEVA IL E+ LD  +I AGLLHD +EDT  
Sbjct: 19  KIVEKAYYFADEAHKKQKRESGEPYISHPVEVAYILVEMGLDTSTIVAGLLHDVIEDTQF 78

Query: 207 VTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRV 266
            ++E I+ EF   V  +VEG   V+KLGK++CK +    ++ +AD++R+M LAM +++RV
Sbjct: 79  -SYEDIKREFSVEVANLVEG---VTKLGKIECKTK----EEQQADNVRKMLLAMADDIRV 130

Query: 267 IIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNA 326
           I++KLADRLHNMRTL +MP  KQ   A ET  ++APLA  LGM +IK ELE+L+F Y N 
Sbjct: 131 ILIKLADRLHNMRTLKYMPVKKQKEKAKETFDIYAPLAHRLGMSKIKWELEDLAFRYINQ 190

Query: 327 EDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKA 386
            +Y  + R++A+   E EK ++E    ++ +++D+  L    + ++I    K  YSIY+ 
Sbjct: 191 NEYYFIVRKIAEKRVEREKYIDE----IISQLKDN--LKKSGIDSDIEGRPKHFYSIYRK 244

Query: 387 VLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDY 446
           ++K   +I+++  +  +RI            L +  + CY  LG+ H I+ P+P   KDY
Sbjct: 245 MVKKNKTIDQIFDLTAVRI------------LVNTVKDCYAALGIAHTIYKPMPGRFKDY 292

Query: 447 IATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVT 501
           IA PKPN YQSLH+T+I     PF        E+QIRT EM   AE GIAAH+  +  V 
Sbjct: 293 IAMPKPNMYQSLHSTVIGPQGKPF--------EIQIRTFEMHKTAEYGIAAHWKYKEGV- 343

Query: 502 GLVGHARPNGRSPRGKTVCLNNAN-IALRISWLNAIREWQEEFVGNMTSREFVDTITRDL 560
                               + AN I  +++WL  I EWQ E      + EF++    DL
Sbjct: 344 --------------------DTANDIDKKLTWLREILEWQRE---TSDAEEFMERFKIDL 380

Query: 561 LGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVV 620
               VFVFTP G++ NLP  AT +D+AY IHTEIGN  + AKV+G +V   + L   E+V
Sbjct: 381 FSDEVFVFTPNGKVINLPYEATPIDFAYKIHTEIGNSCIGAKVSGKMVPLDYHLKTGEIV 440

Query: 621 EII 623
           E++
Sbjct: 441 EVL 443


>gi|296331695|ref|ZP_06874164.1| GTP pyrophosphokinase (RelA/SpoT) [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305675346|ref|YP_003867018.1| GTP pyrophosphokinase RelA/SpoT [Bacillus subtilis subsp.
           spizizenii str. W23]
 gi|296151290|gb|EFG92170.1| GTP pyrophosphokinase (RelA/SpoT) [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305413590|gb|ADM38709.1| GTP pyrophosphokinase (RelA/SpoT) [Bacillus subtilis subsp.
           spizizenii str. W23]
          Length = 734

 Score =  346 bits (888), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 198/491 (40%), Positives = 292/491 (59%), Gaps = 50/491 (10%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           SYLS   +  V +A + A +AH  Q R+SGEP+IIHP++VA IL +LE+D  +IA G LH
Sbjct: 18  SYLSDEHIAFVEKAYLYAEDAHREQYRKSGEPYIIHPIQVAGILVDLEMDPSTIAGGFLH 77

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT+V T + ++E F   V  +V+G   V+KLGK+K K    S ++ +A++ R+MF+
Sbjct: 78  DVVEDTDV-TLDDLKEAFSEEVAMLVDG---VTKLGKIKYK----SQEEQQAENHRKMFV 129

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM +++RVI++KLADRLHNMRTL H+P  KQ  I+ ETL++FAPLA  LG+ +IK ELE+
Sbjct: 130 AMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRISNETLEIFAPLAHRLGISKIKWELED 189

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
            +  Y N + Y ++   +     E E  ++E    + K++E+      + +K +     K
Sbjct: 190 TALRYLNPQQYYRIVNLMKKKRAERELYVDEVVNEVKKRVEE------VNIKADFSGRPK 243

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIY+ ++      NE+  +  +RI            L +  + CY VLG++H  W P
Sbjct: 244 HIYSIYRKMVLQNKQFNEIYDLLAVRI------------LVNSIKDCYAVLGIIHTCWKP 291

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PKPN YQSLHTT+I    +    LEVQIRT EM  IAE G+AAH++ + 
Sbjct: 292 MPGRFKDYIAMPKPNMYQSLHTTVIGPKGDP---LEVQIRTFEMHEIAEYGVAAHWAYK- 347

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                 G A   G            A    ++SW   I E+Q E   +  + EF++++  
Sbjct: 348 -----EGKAANEG------------ATFEKKLSWFREILEFQNE---STDAEEFMESLKI 387

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           DL    V+VFTP+G++  LP G+  +D++Y IH+EIGNK + AKVNG +V+  H L   +
Sbjct: 388 DLFSDMVYVFTPKGDVIELPSGSVPIDFSYRIHSEIGNKTIGAKVNGKMVTLDHKLRTGD 447

Query: 619 VVEIITYNVSF 629
           +VEI+T   S+
Sbjct: 448 IVEILTSKHSY 458


>gi|449095202|ref|YP_007427693.1| GTP pyrophosphokinase [Bacillus subtilis XF-1]
 gi|449029117|gb|AGE64356.1| GTP pyrophosphokinase [Bacillus subtilis XF-1]
          Length = 734

 Score =  346 bits (888), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 198/492 (40%), Positives = 292/492 (59%), Gaps = 50/492 (10%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           SYLS   +  V +A + A +AH  Q R+SGEP+IIHP++VA IL +LE+D  +IA G LH
Sbjct: 18  SYLSDEHIAFVEKAYLYAEDAHREQYRKSGEPYIIHPIQVAGILVDLEMDPSTIAGGFLH 77

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT+V T + ++E F   V  +V+G   V+KLGK+K K    S ++ +A++ R+MF+
Sbjct: 78  DVVEDTDV-TLDDLKEAFSEEVAMLVDG---VTKLGKIKYK----SQEEQQAENHRKMFV 129

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM +++RVI++KLADRLHNMRTL H+P  KQ  I+ ETL++FAPLA  LG+ +IK ELE+
Sbjct: 130 AMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRISNETLEIFAPLAHRLGISKIKWELED 189

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
            +  Y N + Y ++   +     E E  ++E    + K++E+      + +K +     K
Sbjct: 190 TALRYLNPQQYYRIVNLMKKKRAERELYVDEVVNEVKKRVEE------VNIKADFSGRPK 243

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIY+ ++      NE+  +  +RI            L +  + CY VLG++H  W P
Sbjct: 244 HIYSIYRKMVLQNKQFNEIYDLLAVRI------------LVNSIKDCYAVLGIIHTCWKP 291

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PKPN YQSLHTT+I    +    LEVQIRT EM  IAE G+AAH++ + 
Sbjct: 292 MPGRFKDYIAMPKPNMYQSLHTTVIGPKGDP---LEVQIRTFEMHEIAEYGVAAHWAYK- 347

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                 G A   G            A    ++SW   I E+Q E   +  + EF++++  
Sbjct: 348 -----EGKAATEG------------ATFEKKLSWFREILEFQNE---STDAEEFMESLKI 387

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           DL    V+VFTP+G++  LP G+  +D++Y IH+EIGNK + AKVNG +V+  H L   +
Sbjct: 388 DLFSDMVYVFTPKGDVIELPSGSVPIDFSYRIHSEIGNKTIGAKVNGKMVTLDHKLRTGD 447

Query: 619 VVEIITYNVSFS 630
           +VEI+T   S+ 
Sbjct: 448 IVEILTSKHSYG 459


>gi|410584315|ref|ZP_11321418.1| (p)ppGpp synthetase, RelA/SpoT family [Thermaerobacter subterraneus
           DSM 13965]
 gi|410504250|gb|EKP93761.1| (p)ppGpp synthetase, RelA/SpoT family [Thermaerobacter subterraneus
           DSM 13965]
          Length = 732

 Score =  346 bits (888), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 203/516 (39%), Positives = 302/516 (58%), Gaps = 63/516 (12%)

Query: 113 LSPSVSSDAFKEDSPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFI 172
           L PSV+ D           E +R    YL P +L+ +RRA      AH GQKR SG+ FI
Sbjct: 5   LQPSVTPD-----------ELIRRAGRYLGPEDLDWLRRAFEFGKAAHQGQKRASGQDFI 53

Query: 173 IHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSK 232
            HP+ VA IL +LELD  ++ A LLHDTVEDT V T E++E EFG+ V  +V+G TK+++
Sbjct: 54  EHPLAVALILADLELDAATLVAALLHDTVEDTEV-TLEQVEREFGSEVALLVDGVTKLNQ 112

Query: 233 LGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSI 292
           +       E  +  + +A++LR+MFLAM  ++RV+++KLADRLHNMRTL+ +P  KQ + 
Sbjct: 113 I-------EWRTRLEEQAENLRKMFLAMARDIRVVLIKLADRLHNMRTLAVVPREKQIAK 165

Query: 293 ATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANK 352
           + ETL++FAPLA  LGM QI+ ELE+L+  Y   E Y ++  R+     E E+  +   +
Sbjct: 166 SRETLEIFAPLAHRLGMSQIQWELEDLALRYLEPERYRELSERIPRKRAEREELAQVIIR 225

Query: 353 ILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPC 412
            L  K+ +        ++ +I+   K  YSIY+ + +    ++++  +  +R+I+     
Sbjct: 226 TLRAKLAE------AGIRADIQGRAKHFYSIYRKMYEQGKDLSQIYDLIAVRVIV----- 274

Query: 413 SGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFR 472
                     + CY  LG+VH IW P+P   KDYIATPK N YQSLHTT+I    E    
Sbjct: 275 -------DTVKDCYGALGVVHTIWRPLPGRFKDYIATPKSNMYQSLHTTVIGPQGEP--- 324

Query: 473 LEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISW 532
            E+QIRT +M   AE GIAAH+  +                 RG+T    + +   +++W
Sbjct: 325 FEIQIRTWDMHRTAEYGIAAHWRYK----------------ERGRT----DKDFDAKLAW 364

Query: 533 LNAIREWQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHT 592
           L  + EWQ +  G+  +REF++++  D+    VFVFTP+G++ +LP G+T VD+A+ IHT
Sbjct: 365 LRQVLEWQNDL-GD--AREFMESLKIDVFSDEVFVFTPKGDVIDLPAGSTPVDFAFRIHT 421

Query: 593 EIGNKMVAAKVNGNLVSPTHVLANAEVVEIITYNVS 628
           EIG++ V AKVNG +V   + L N ++VEI+T   S
Sbjct: 422 EIGHRCVGAKVNGRIVPLDYRLKNGDIVEILTSKQS 457


>gi|270307456|ref|YP_003329514.1| relA/spoT protein, GTP pyrophosphokinase [Dehalococcoides sp. VS]
 gi|270153348|gb|ACZ61186.1| relA/spoT protein, GTP pyrophosphokinase [Dehalococcoides sp. VS]
          Length = 728

 Score =  346 bits (888), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 200/502 (39%), Positives = 293/502 (58%), Gaps = 57/502 (11%)

Query: 133 DLRPTIS-YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
           DL+   S YL P +L  +  A   A  AH GQ R+SGEPFI HP+ VA  L +L+LD  +
Sbjct: 5   DLKEKASKYLPPEKLVFLEEAYNYAAAAHTGQMRKSGEPFIEHPLNVALTLADLQLDVST 64

Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLG------KLKCKNENHSV 245
           ++A LLHD  ED N+ + E+I+++FG  V ++V+G TK+SKL         +    N S+
Sbjct: 65  LSAALLHDVPEDANI-SLEQIDKKFGPDVAKLVDGVTKLSKLALGPAIEDARRPGGNASL 123

Query: 246 QDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAK 305
           +  +A++LR+M +AM+E++RV+ +KLADR HNMRTL  +   K+ SIA ET++++APLA 
Sbjct: 124 R--QAENLRKMLVAMSEDLRVVFIKLADRFHNMRTLQALSAEKRRSIAKETMEIYAPLAH 181

Query: 306 LLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLD 365
            LG++++K +LE+L+F Y +   Y +V   V     + +  +E  + IL  + E +    
Sbjct: 182 RLGIWELKWQLEDLAFRYLDPRHYRQVANLVDSKLAQRKNYIEHVSAILQSEFEKN---- 237

Query: 366 LMTVKTEIRSVCKEPYSIYKAVLK--SRG-SINEVNQIAQLRIIIKPKPCSGVGPLCSPQ 422
              +K E+    K  YSIY+ + K  S+G    ++  +  LR+++   P           
Sbjct: 238 --GLKVELSGRPKHLYSIYQKMEKYASQGKQFEDIYDVLALRVLVNDIPD---------- 285

Query: 423 QICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEM 482
             CYH +G+VH +W PIP A  DYIA PKPNGYQSLHT ++         LEVQ+RT +M
Sbjct: 286 --CYHAIGIVHSLWHPIPGAFDDYIANPKPNGYQSLHTAVMSL---GTTPLEVQVRTYQM 340

Query: 483 DLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEE 542
             IAE G+AAH+                    R KT    + N   RI WL  + EW  +
Sbjct: 341 HHIAEYGVAAHW--------------------RYKTAGKEDVNFEDRIGWLRQLIEWHRD 380

Query: 543 FVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAK 602
             G   + EF++++  D+   +VFVFTP+GEIK+L KGAT +D+AY IHTE+GN+ + AK
Sbjct: 381 MRG---AEEFLESVKTDIFNDQVFVFTPKGEIKDLAKGATPIDFAYRIHTELGNRCIGAK 437

Query: 603 VNGNLVSPTHVLANAEVVEIIT 624
            NG LV   + L N EVVEI+T
Sbjct: 438 ANGRLVPLDYQLKNGEVVEIVT 459


>gi|221310698|ref|ZP_03592545.1| GTP pyrophosphokinase [Bacillus subtilis subsp. subtilis str. 168]
 gi|221315022|ref|ZP_03596827.1| GTP pyrophosphokinase [Bacillus subtilis subsp. subtilis str. NCIB
           3610]
 gi|221319943|ref|ZP_03601237.1| GTP pyrophosphokinase [Bacillus subtilis subsp. subtilis str.
           JH642]
 gi|221324224|ref|ZP_03605518.1| GTP pyrophosphokinase [Bacillus subtilis subsp. subtilis str. SMY]
 gi|255767631|ref|NP_390638.2| GTP pyrophosphokinase [Bacillus subtilis subsp. subtilis str. 168]
 gi|321312288|ref|YP_004204575.1| GTP pyrophosphokinase [Bacillus subtilis BSn5]
 gi|384176340|ref|YP_005557725.1| GTP pyrophosphokinase [Bacillus subtilis subsp. subtilis str.
           RO-NN-1]
 gi|386759315|ref|YP_006232531.1| GTP diphosphokinase [Bacillus sp. JS]
 gi|402776914|ref|YP_006630858.1| GTP pyrophosphokinase RelA/SpoT [Bacillus subtilis QB928]
 gi|418032062|ref|ZP_12670545.1| GTP pyrophosphokinase [Bacillus subtilis subsp. subtilis str. SC-8]
 gi|428280212|ref|YP_005561947.1| GTP pyrophosphokinase [Bacillus subtilis subsp. natto BEST195]
 gi|430755894|ref|YP_007208735.1| GTP pyrophosphokinase / Guanosine-3',5'-bis(Diphosphate) 3'
           pyrophosphohydrolase [Bacillus subtilis subsp. subtilis
           str. BSP1]
 gi|452915236|ref|ZP_21963862.1| GTP pyrophosphokinase [Bacillus subtilis MB73/2]
 gi|251757446|sp|O54408.3|RELA_BACSU RecName: Full=GTP pyrophosphokinase; AltName: Full=(p)ppGpp
           synthase; AltName: Full=ATP:GTP
           3'-pyrophosphotransferase; AltName: Full=ppGpp synthase
           I
 gi|2739435|gb|AAC46041.1| (p)ppGpp synthetase [Bacillus subtilis subsp. subtilis str. JH642]
 gi|225185259|emb|CAB14719.2| GTP pyrophosphokinase (RelA/SpoT) [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|291485169|dbj|BAI86244.1| GTP pyrophosphokinase [Bacillus subtilis subsp. natto BEST195]
 gi|320018562|gb|ADV93548.1| GTP pyrophosphokinase (RelA/SpoT) [Bacillus subtilis BSn5]
 gi|349595564|gb|AEP91751.1| GTP pyrophosphokinase [Bacillus subtilis subsp. subtilis str.
           RO-NN-1]
 gi|351470925|gb|EHA31046.1| GTP pyrophosphokinase [Bacillus subtilis subsp. subtilis str. SC-8]
 gi|384932597|gb|AFI29275.1| GTP diphosphokinase [Bacillus sp. JS]
 gi|402482094|gb|AFQ58603.1| GTP pyrophosphokinase (RelA/SpoT) [Bacillus subtilis QB928]
 gi|407959953|dbj|BAM53193.1| GTP pyrophosphokinase [Bacillus subtilis BEST7613]
 gi|407965596|dbj|BAM58835.1| GTP pyrophosphokinase [Bacillus subtilis BEST7003]
 gi|430020414|gb|AGA21020.1| GTP pyrophosphokinase / Guanosine-3',5'-bis(Diphosphate) 3'
           pyrophosphohydrolase [Bacillus subtilis subsp. subtilis
           str. BSP1]
 gi|452115584|gb|EME05980.1| GTP pyrophosphokinase [Bacillus subtilis MB73/2]
          Length = 734

 Score =  346 bits (888), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 198/491 (40%), Positives = 292/491 (59%), Gaps = 50/491 (10%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           SYLS   +  V +A + A +AH  Q R+SGEP+IIHP++VA IL +LE+D  +IA G LH
Sbjct: 18  SYLSDEHIAFVEKAYLYAEDAHREQYRKSGEPYIIHPIQVAGILVDLEMDPSTIAGGFLH 77

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT+V T + ++E F   V  +V+G   V+KLGK+K K    S ++ +A++ R+MF+
Sbjct: 78  DVVEDTDV-TLDDLKEAFSEEVAMLVDG---VTKLGKIKYK----SQEEQQAENHRKMFV 129

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM +++RVI++KLADRLHNMRTL H+P  KQ  I+ ETL++FAPLA  LG+ +IK ELE+
Sbjct: 130 AMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRISNETLEIFAPLAHRLGISKIKWELED 189

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
            +  Y N + Y ++   +     E E  ++E    + K++E+      + +K +     K
Sbjct: 190 TALRYLNPQQYYRIVNLMKKKRAERELYVDEVVNEVKKRVEE------VNIKADFSGRPK 243

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIY+ ++      NE+  +  +RI            L +  + CY VLG++H  W P
Sbjct: 244 HIYSIYRKMVLQNKQFNEIYDLLAVRI------------LVNSIKDCYAVLGIIHTCWKP 291

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PKPN YQSLHTT+I    +    LEVQIRT EM  IAE G+AAH++ + 
Sbjct: 292 MPGRFKDYIAMPKPNMYQSLHTTVIGPKGDP---LEVQIRTFEMHEIAEYGVAAHWAYK- 347

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                 G A   G            A    ++SW   I E+Q E   +  + EF++++  
Sbjct: 348 -----EGKAANEG------------ATFEKKLSWFREILEFQNE---STDAEEFMESLKI 387

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           DL    V+VFTP+G++  LP G+  +D++Y IH+EIGNK + AKVNG +V+  H L   +
Sbjct: 388 DLFSDMVYVFTPKGDVIELPSGSVPIDFSYRIHSEIGNKTIGAKVNGKMVTLDHKLRTGD 447

Query: 619 VVEIITYNVSF 629
           +VEI+T   S+
Sbjct: 448 IVEILTSKHSY 458


>gi|218288848|ref|ZP_03493099.1| (p)ppGpp synthetase I, SpoT/RelA [Alicyclobacillus acidocaldarius
           LAA1]
 gi|218240937|gb|EED08114.1| (p)ppGpp synthetase I, SpoT/RelA [Alicyclobacillus acidocaldarius
           LAA1]
          Length = 725

 Score =  346 bits (888), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 200/492 (40%), Positives = 287/492 (58%), Gaps = 50/492 (10%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           SY+SP ++  VRRA   A +AH GQ R SGEP+I HP+ VA IL +L LD  +I AGLLH
Sbjct: 19  SYMSPEDIAAVRRAYEFAAKAHQGQTRLSGEPYISHPLAVAYILADLRLDAAAIMAGLLH 78

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT+V +   I + FGA V  +V+G TK+ ++ K   + E       +A++LR+MF+
Sbjct: 79  DVVEDTSV-SDSAIVQTFGAEVATLVDGVTKLKRI-KFDSREEQ------QAENLRKMFM 130

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM  ++RV+I+KLADRLHNMRTL +  P  Q   A ETL++FAPLA  LG+  IK ELE+
Sbjct: 131 AMARDIRVLIIKLADRLHNMRTLKYQSPETQVRKARETLEIFAPLAHRLGINTIKWELED 190

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
           LS  Y N + Y ++   +A   +E E+ +E    +L +K+ +      + +K ++    K
Sbjct: 191 LSLRYLNPQQYYRIVNLMARKRQEREQYIEGVIAVLREKLAE------LNLKADVSGRAK 244

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIY+ ++      NE+  +  +RII++              + CY  LG+VH +W P
Sbjct: 245 HIYSIYRKMVTQHKEFNEIYDLFAIRIIVESI------------KDCYGALGVVHTMWKP 292

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PK N YQSLHTT+I    E    LE+QIRT EM   AE GIAAH+    
Sbjct: 293 MPGRFKDYIAMPKANMYQSLHTTVIGPNGEP---LEIQIRTWEMHQTAEYGIAAHW---- 345

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
            V    G  R                + A +++W   + EWQ++F     ++EF++T+  
Sbjct: 346 -VYKESGSKRVED-------------DFAKKLAWFREVLEWQQDF---RDAQEFMETLKI 388

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           DL   +VFVFTP+G++  LP G+  +D+AY IHT+IGN  + AKVNG +V   + L   +
Sbjct: 389 DLFSDQVFVFTPKGDVIELPAGSVPIDFAYRIHTDIGNHCIGAKVNGKMVPLDYRLRTGD 448

Query: 619 VVEIITYNVSFS 630
           +VEIIT   S+ 
Sbjct: 449 IVEIITSKHSYG 460


>gi|258512062|ref|YP_003185496.1| (p)ppGpp synthetase I SpoT/RelA [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
 gi|257478788|gb|ACV59107.1| (p)ppGpp synthetase I, SpoT/RelA [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
          Length = 725

 Score =  346 bits (888), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 200/492 (40%), Positives = 287/492 (58%), Gaps = 50/492 (10%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           SY+SP ++  VRRA   A +AH GQ R SGEP+I HP+ VA IL +L LD  +I AGLLH
Sbjct: 19  SYMSPEDIAAVRRAYEFAAKAHQGQMRLSGEPYISHPLAVAYILADLRLDAAAIMAGLLH 78

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT+V +   I + FGA V  +V+G TK+ ++ K   + E       +A++LR+MF+
Sbjct: 79  DVVEDTSV-SDSAIVQAFGAEVATLVDGVTKLKRI-KFDSREEQ------QAENLRKMFM 130

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM  ++RV+I+KLADRLHNMRTL +  P  Q   A ETL++FAPLA  LG+  IK ELE+
Sbjct: 131 AMARDIRVLIIKLADRLHNMRTLKYQSPETQVRKARETLEIFAPLAHRLGINTIKWELED 190

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
           LS  Y N + Y ++   +A   +E E+ +E    +L +K+ +      + +K ++    K
Sbjct: 191 LSLRYLNPQQYYRIVNLMARKRQEREQYIEGVIAVLREKLAE------LNLKADVSGRAK 244

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIY+ ++      NE+  +  +RII++              + CY  LG+VH +W P
Sbjct: 245 HIYSIYRKMVTQHKEFNEIYDLFAIRIIVESI------------KDCYGALGVVHTMWKP 292

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PK N YQSLHTT+I    E    LE+QIRT EM   AE GIAAH+    
Sbjct: 293 MPGRFKDYIAMPKANMYQSLHTTVIGPNGEP---LEIQIRTWEMHQTAEYGIAAHW---- 345

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
            V    G  R                + A +++W   + EWQ++F     ++EF++T+  
Sbjct: 346 -VYKESGSKRVED-------------DFAKKLAWFREVLEWQQDF---RDAQEFMETLKI 388

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           DL   +VFVFTP+G++  LP G+  +D+AY IHT+IGN  + AKVNG +V   + L   +
Sbjct: 389 DLFSDQVFVFTPKGDVIELPAGSVPIDFAYRIHTDIGNHCIGAKVNGKMVPLDYRLRTGD 448

Query: 619 VVEIITYNVSFS 630
           +VEIIT   S+ 
Sbjct: 449 IVEIITSKHSYG 460


>gi|291460900|ref|ZP_06600232.1| GTP diphosphokinase [Fusobacterium periodonticum ATCC 33693]
 gi|291380153|gb|EFE87671.1| GTP diphosphokinase [Fusobacterium periodonticum ATCC 33693]
          Length = 515

 Score =  346 bits (888), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 189/480 (39%), Positives = 295/480 (61%), Gaps = 55/480 (11%)

Query: 145 ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDT 204
           + + ++ AL  A E+H GQ R+SG+ +IIHPVEVA+IL E+++D +++ AGLLHD VEDT
Sbjct: 20  DFDKLKLALAFAEESHQGQYRKSGDDYIIHPVEVAKILMEMKMDTDTVVAGLLHDVVEDT 79

Query: 205 NVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEV 264
            ++    I+  FG TV  +V+G   V+KL  L    +N      +A+++R+M LAM E +
Sbjct: 80  -LIPIADIKYNFGDTVAVLVDG---VTKLKALPNGTKN------QAENIRKMILAMAENI 129

Query: 265 RVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYT 324
           RVI++KLADRLHNMRTL  M P KQ +I+ ETL ++APLA  LGM +IKSELE+LSF Y 
Sbjct: 130 RVILIKLADRLHNMRTLKFMKPEKQQAISKETLDIYAPLAHRLGMAKIKSELEDLSFSYL 189

Query: 325 NAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIY 384
           + E+Y ++KR V +  +E +  ++   + + + + D      + +K E++   K  YSIY
Sbjct: 190 HHEEYLEIKRLVENTKEERKDYIDNFIRTMKRTLVD------LGLKAEVKGRFKHFYSIY 243

Query: 385 KAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMK 444
           K + +     +++  +  +R+I++ K              CYH+LG+VH  +TP+P   K
Sbjct: 244 KKMYQKGKEFDDIYDLMGVRVIVEDKAA------------CYHILGIVHSQYTPVPGRFK 291

Query: 445 DYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLV 504
           DYIA PK N YQS+HTT++  L +    +E+QIRT++MD IAE GIAAH++         
Sbjct: 292 DYIAVPKSNNYQSIHTTIVGPLGKF---IEIQIRTKDMDDIAEEGIAAHWN--------- 339

Query: 505 GHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSR 564
              + N ++ +   +            WL  I E+Q E   + ++ +F++ +T D+    
Sbjct: 340 --YKENKKTSKDDNIY----------GWLRHIIEFQNE---SDSTEDFIEGVTGDIDRGT 384

Query: 565 VFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
           +F F+P+G+I  LP GAT +D+A+M+HT++G K + AKVNG +V+  H L + + VEIIT
Sbjct: 385 IFTFSPKGDIIELPVGATALDFAFMVHTQVGCKCIGAKVNGRMVTIDHKLKSGDKVEIIT 444


>gi|154505866|ref|ZP_02042604.1| hypothetical protein RUMGNA_03408 [Ruminococcus gnavus ATCC 29149]
 gi|336432177|ref|ZP_08612016.1| hypothetical protein HMPREF0991_01135 [Lachnospiraceae bacterium
           2_1_58FAA]
 gi|153793884|gb|EDN76304.1| RelA/SpoT family protein [Ruminococcus gnavus ATCC 29149]
 gi|336019336|gb|EGN49062.1| hypothetical protein HMPREF0991_01135 [Lachnospiraceae bacterium
           2_1_58FAA]
          Length = 768

 Score =  346 bits (888), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 207/507 (40%), Positives = 302/507 (59%), Gaps = 60/507 (11%)

Query: 126 SPERLWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
           +PE+L+E L   +    P+ ++ L+ +A  L+ EAH  Q R+SGEP+IIHP+ V  IL +
Sbjct: 30  NPEQLYEALIARVRKYHPSADISLIEKAYKLSREAHKEQVRKSGEPYIIHPLWVGIILAD 89

Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
           LE+D E+I AG+LHDTVEDT + T E I  EFG  V  +V+G TK+ +L   K K E   
Sbjct: 90  LEMDKETIVAGMLHDTVEDTEM-TVEDITREFGEEVALLVDGVTKLGQLSYSKDKLE--- 145

Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
              V+A++LR+MFLAM +++RVII+KLADRLHNMRTL  M P KQ   A ET+ ++AP+A
Sbjct: 146 ---VQAENLRKMFLAMAKDIRVIIIKLADRLHNMRTLEFMVPAKQKEKARETMDIYAPIA 202

Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
           + LG+ +IK+EL++LS  Y   E Y ++   V DL  E + E EE  + ++ ++     +
Sbjct: 203 QRLGISKIKTELDDLSLKYYQPEVYFQL---VKDL-NERKTEREEFVQQIVAEV--SHHM 256

Query: 365 DLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
           +   ++ ++    K  +SIYK ++    ++++V  +  +RII+               + 
Sbjct: 257 ENAHIQAKVYGRVKHFFSIYKKMVNQNKTLDQVYDLFAVRIIV------------DSVKD 304

Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRT 479
           CY  LG++H ++TPIP   KDYIA PK N YQSLHTTL+     PF        E+QIRT
Sbjct: 305 CYAALGVIHEMYTPIPGRFKDYIAMPKANMYQSLHTTLMGPAGQPF--------EIQIRT 356

Query: 480 EEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREW 539
           EEM   AE GIAAH+             + +G S +      N +    ++SWL  I EW
Sbjct: 357 EEMHKTAEYGIAAHWK-----------YKESGGSAKN-----NKSREEEKLSWLRQILEW 400

Query: 540 QEEFVGNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNK 597
           Q +   N   REF+  +    DL    V+ FTP G++KNLP G+T VD+AY IH+ +GNK
Sbjct: 401 QRDMSDN---REFLSLLKGDLDLFAEDVYCFTPNGDVKNLPNGSTPVDFAYAIHSAVGNK 457

Query: 598 MVAAKVNGNLVSPTHVLANAEVVEIIT 624
           MV A+VNG LV+  + + N + +EI+T
Sbjct: 458 MVGARVNGKLVNIDYKIQNGDRIEILT 484


>gi|302387920|ref|YP_003823742.1| (p)ppGpp synthetase I SpoT/RelA [Clostridium saccharolyticum WM1]
 gi|302198548|gb|ADL06119.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium saccharolyticum WM1]
          Length = 774

 Score =  346 bits (887), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 200/509 (39%), Positives = 305/509 (59%), Gaps = 65/509 (12%)

Query: 126 SPERLWEDLRPTISYLSP-NELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
           SP+ L+E+L  +I    P +++ ++ +A  +A EAH  Q+R+SGEP+IIHP+ VA IL +
Sbjct: 37  SPDVLYEELVHSIRRYHPSDDITMIEKAYHIAEEAHKDQRRKSGEPYIIHPLCVAIILAD 96

Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
           LE+D E+IAAG+LHD VEDT +++ + ++ EFG  V  +V+G TK++++     K E   
Sbjct: 97  LEMDKETIAAGILHDVVEDT-IMSLDELKAEFGEEVALLVDGVTKLTQISWSMDKME--- 152

Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
              ++A++LR+MFLAM +++RVII+KLADRLHNMRTL +M P KQ   A ET++++AP+A
Sbjct: 153 ---IQAENLRKMFLAMAKDIRVIIIKLADRLHNMRTLQYMKPEKQKEKAKETMEIYAPIA 209

Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDD--Q 362
             LG+ +IK EL++LS  Y   E Y ++  +++ L K       +A +  +K I D+   
Sbjct: 210 HRLGISKIKIELDDLSLRYLQPEIYYELAEKIS-LKK-------DARETFVKSIVDEVQD 261

Query: 363 FLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQ 422
            L    ++  +    K  +SIYK ++    +++++  +  +RII+               
Sbjct: 262 HLRSGGIEARVDGRVKHFFSIYKKMVNQNKTLDQIYDLFAVRIIV------------DSV 309

Query: 423 QICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQI 477
           + CY  LG++H ++ PIP   KDYIA PKPN YQSLHTTLI     PF        E+QI
Sbjct: 310 KDCYAALGVIHEMYKPIPGRFKDYIAMPKPNMYQSLHTTLIGNNGQPF--------EIQI 361

Query: 478 RTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIR 537
           RT EM   AE GIAAH+  +   +G V   +                    ++SWL  I 
Sbjct: 362 RTYEMHRTAEYGIAAHWKYKESGSGQVAAGKEEE-----------------KLSWLRQIL 404

Query: 538 EWQEEFVGNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIG 595
           EWQ++   N   +EF++ +    DL    V+ FTP G++KNLP G+T +D+AY IH+ +G
Sbjct: 405 EWQKDMSDN---KEFLNMVKGDLDLFSDSVYCFTPSGDVKNLPAGSTPIDFAYSIHSAVG 461

Query: 596 NKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
           NKMV A+VNG LV+  +V+ N + VE+IT
Sbjct: 462 NKMVGARVNGKLVNIEYVIENGDQVEVIT 490


>gi|239908231|ref|YP_002954972.1| GTP pyrophosphokinase [Desulfovibrio magneticus RS-1]
 gi|239798097|dbj|BAH77086.1| GTP pyrophosphokinase [Desulfovibrio magneticus RS-1]
          Length = 740

 Score =  346 bits (887), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 207/496 (41%), Positives = 286/496 (57%), Gaps = 50/496 (10%)

Query: 129 RLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
           R+ E L  T +YL+  E  ++ +A + +  AH GQ R SGEP++ HP+E A IL ++ LD
Sbjct: 3   RINEILDKTSAYLNEQEQAIITKAYVFSAAAHAGQVRLSGEPYLSHPLEAAGILADMRLD 62

Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
             SIA+GLLHDTVEDT   T + IEE FG  V  IV+G TK+S L   + K E       
Sbjct: 63  AASIASGLLHDTVEDTKA-TVDEIEELFGEEVADIVDGVTKIS-LIPFETKEE------A 114

Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
           +A+++R+M LAM E++RV++VKLADRLHNMRTL    PHKQ+ IA ET+ ++APLA  LG
Sbjct: 115 QAENIRKMILAMAEDIRVVLVKLADRLHNMRTLEFQKPHKQALIAQETMDIYAPLANRLG 174

Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
           +++IK+ELE+ SF Y   + YA++   VA  +   E  +E     L      ++ L    
Sbjct: 175 LHRIKTELEDWSFRYLKPDIYAQLVEGVATHHTVDETFIERVIGHL------NELLGPNN 228

Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
           +K  I    K  +S++  +     +I++V+ +   R+I++              + CYHV
Sbjct: 229 IKARIVGRRKHLWSVHNKMRVQGLTIDQVHDLVAFRVIVETI------------RECYHV 276

Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAER 488
           LGLVH +W P+P   KDYI+ PK N YQSLHTT++    E   R+E+QIRTEEM  +AE 
Sbjct: 277 LGLVHSLWKPVPGRFKDYISMPKANMYQSLHTTVVGPGGE---RIEIQIRTEEMHRLAEE 333

Query: 489 GIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMT 548
           G+AAH+  +                 RGK     N     R  WL  I +WQ E      
Sbjct: 334 GVAAHWKYK--------------ERERGKF----NPKDVERFQWLRQIMDWQREL---KD 372

Query: 549 SREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLV 608
           SREFV  +  DL    V+VFTP+G++K LP+GAT VD A++IHT +G     AKVNG LV
Sbjct: 373 SREFVTNLRFDLFQDEVYVFTPKGDVKELPEGATAVDLAFLIHTAVGEHCAGAKVNGKLV 432

Query: 609 SPTHVLANAEVVEIIT 624
                L N + VEIIT
Sbjct: 433 PLETPLKNGDTVEIIT 448


>gi|350266929|ref|YP_004878236.1| RelA/SpoT family protein [Bacillus subtilis subsp. spizizenii
           TU-B-10]
 gi|349599816|gb|AEP87604.1| RelA/SpoT family protein [Bacillus subtilis subsp. spizizenii
           TU-B-10]
          Length = 734

 Score =  346 bits (887), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 198/491 (40%), Positives = 292/491 (59%), Gaps = 50/491 (10%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           SYLS   +  V +A + A +AH  Q R+SGEP+IIHP++VA IL +LE+D  +IA G LH
Sbjct: 18  SYLSDEHIAFVEKAYLYAEDAHREQYRKSGEPYIIHPIQVAGILVDLEMDPSTIAGGFLH 77

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT+V T + ++E F   V  +V+G   V+KLGK+K K    S ++ +A++ R+MF+
Sbjct: 78  DVVEDTDV-TLDDLKEAFSEEVAMLVDG---VTKLGKIKYK----SQEEQQAENHRKMFV 129

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM +++RVI++KLADRLHNMRTL H+P  KQ  I+ ETL++FAPLA  LG+ +IK ELE+
Sbjct: 130 AMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRISNETLEIFAPLAHRLGISKIKWELED 189

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
            +  Y N + Y ++   +     E E  ++E    + K++E+      + +K +     K
Sbjct: 190 TALRYLNPQQYYRIVNLMKKKRAERELYVDEVVNEVKKRVEE------VNIKADFSGRPK 243

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIY+ ++      NE+  +  +RI            L +  + CY VLG++H  W P
Sbjct: 244 HIYSIYRKMVLQNKQFNEIYDLLAVRI------------LVNSIKDCYAVLGIIHTCWKP 291

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PKPN YQSLHTT+I    +    LEVQIRT EM  IAE G+AAH++ + 
Sbjct: 292 MPGRFKDYIAMPKPNMYQSLHTTVIGPKGDP---LEVQIRTFEMHEIAEYGVAAHWAYK- 347

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                 G A   G            A    ++SW   I E+Q E   +  + EF++++  
Sbjct: 348 -----EGKAANEG------------ATFEKKLSWFREILEFQNE---STDAEEFMESLKI 387

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           DL    V+VFTP+G++  LP G+  +D++Y IH+EIGNK + AKVNG +V+  H L   +
Sbjct: 388 DLFSDMVYVFTPKGDVIELPSGSVPIDFSYRIHSEIGNKTIGAKVNGKMVTLDHKLRTGD 447

Query: 619 VVEIITYNVSF 629
           +VEI+T   S+
Sbjct: 448 IVEILTSKHSY 458


>gi|189911774|ref|YP_001963329.1| GTP pyrophosphokinase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167776450|gb|ABZ94751.1| GTP pyrophosphokinase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
          Length = 684

 Score =  346 bits (887), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 196/484 (40%), Positives = 293/484 (60%), Gaps = 43/484 (8%)

Query: 141 LSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDT 200
           L P + +L+++A  +A + H+GQKR SGEP+IIHP+ VA +L EL LD  +IAAGLLHD 
Sbjct: 21  LGPEKAQLIQKAYHIADKMHEGQKRLSGEPYIIHPMNVASVLDELGLDERAIAAGLLHDV 80

Query: 201 VEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAM 260
           VEDT+  T E +  EFG  +  +VEG TK+S++       ++ S +   A+++R+M LA 
Sbjct: 81  VEDTSY-TKEDMAREFGEDIAALVEGVTKISEI-------KSQSKETEAAENIRKMLLAT 132

Query: 261 TEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLS 320
            ++VRV+++KLAD+ HN+RTL   P  KQ  IA E L ++AP+A  LG+Y++K ELE+L+
Sbjct: 133 IKDVRVMLIKLADKTHNVRTLKFQPEEKQKRIAKEVLSLYAPIAGRLGVYKVKFELEDLA 192

Query: 321 FMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEP 380
           F   + ++Y ++K+RV+    E ++ +E+  KI++K     Q L  + +   I    K  
Sbjct: 193 FQSLHPDEYQEIKKRVSAKKSERDEYIEKI-KIILK-----QRLAEINIDARIDGRAKHF 246

Query: 381 YSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIP 440
           YSIY+ ++    S +E+  +  +RII             +  + CY VLG+VH +WTPIP
Sbjct: 247 YSIYRKMVTKEKSFSEIFDLRAVRII------------ANEIKDCYGVLGIVHTLWTPIP 294

Query: 441 RAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFV 500
              KDYIATPK N YQSLHTT+       M   EVQIRT+EM+ IAE G+AAH++     
Sbjct: 295 GRFKDYIATPKTNLYQSLHTTVFGPDGRPM---EVQIRTKEMNAIAENGVAAHWA----- 346

Query: 501 TGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDL 560
                  + +    R   +  N    A R+ WL  ++ WQ+    ++ S+EF++ +  DL
Sbjct: 347 ------YKESTNLTRSSVILQNGVENAFRMKWLEILKSWQDP---SLDSKEFMEELQYDL 397

Query: 561 LGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVV 620
               +FVFTP+GEI  +PKGATV+DYA+ IHT++G      KVNG +V+    L + + V
Sbjct: 398 HEDEIFVFTPKGEIIEMPKGATVLDYAFRIHTDVGLHARGGKVNGRMVTLRTELKSGDQV 457

Query: 621 EIIT 624
           EIIT
Sbjct: 458 EIIT 461


>gi|282881989|ref|ZP_06290630.1| GTP diphosphokinase [Peptoniphilus lacrimalis 315-B]
 gi|281298019|gb|EFA90474.1| GTP diphosphokinase [Peptoniphilus lacrimalis 315-B]
          Length = 711

 Score =  346 bits (887), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 209/497 (42%), Positives = 298/497 (59%), Gaps = 59/497 (11%)

Query: 132 EDLRPTISYLSPNELEL-VRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWE 190
           +DL   I   +PN  E  +R A  LA   H GQKR SGE +IIHP+ VA IL ++ +D  
Sbjct: 4   DDLIEKIKTYNPNVDEAEIRSAYELAKVNHQGQKRNSGEDYIIHPLHVAMILADMNMDSA 63

Query: 191 SIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKA 250
           +I AGLLHDT+EDT+V T+E IE++FG  +  +V+G TK+ KL   K K E        A
Sbjct: 64  TIIAGLLHDTIEDTSV-TYEDIEKKFGKEIAELVDGVTKLKKLN-YKSKAEKQ------A 115

Query: 251 DDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMY 310
           +++R+M LAM +++RVIIVKLADRLHNMRTL +M   K+   ATETL+++AP+A  LGM 
Sbjct: 116 ENIRKMVLAMAKDIRVIIVKLADRLHNMRTLEYMTEAKKIEKATETLEIYAPIADRLGMS 175

Query: 311 QIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDL--MT 368
           ++K ELE+LS  Y + ++Y K    + D+  +  KE EE    L+  I D   ++L  + 
Sbjct: 176 RVKWELEDLSLRYLDPDEYYK----LVDMVNKRRKEREE----LINSIIDTLKVNLERVG 227

Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSI-NEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYH 427
           +K EI    K  YSIYK  +K +G + +E+  ++ +RI            L +  + CY 
Sbjct: 228 IKCEINGRPKNFYSIYKK-MKVKGKVFDEIYDLSAVRI------------LTNDIKDCYG 274

Query: 428 VLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAE 487
            LG+VH +W PIP   KDYIA PKPN YQSLHTT+I    E+    EVQIRT +M   AE
Sbjct: 275 ALGVVHTLWKPIPGRFKDYIAMPKPNNYQSLHTTVIDNNGET---FEVQIRTYQMHQTAE 331

Query: 488 RGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNM 547
            GIAAH+    + TG            + KT   +       ++WL  + EWQ++     
Sbjct: 332 YGIAAHWK---YKTG------------QTKTTSFDE-----NLTWLRQLMEWQKDL---N 368

Query: 548 TSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNL 607
              +F+DT+  D     VFVF+P+G++ NLP+G+T +D+AY IHT++GN  V AKVNG +
Sbjct: 369 DPNDFMDTLKVDFFADEVFVFSPKGDVINLPEGSTPIDFAYRIHTQVGNTCVGAKVNGRI 428

Query: 608 VSPTHVLANAEVVEIIT 624
           V  ++ L++  +V+IIT
Sbjct: 429 VPLSYKLSSGNIVDIIT 445


>gi|443632083|ref|ZP_21116263.1| GTP pyrophosphokinase (RelA/SpoT) [Bacillus subtilis subsp.
           inaquosorum KCTC 13429]
 gi|443348198|gb|ELS62255.1| GTP pyrophosphokinase (RelA/SpoT) [Bacillus subtilis subsp.
           inaquosorum KCTC 13429]
          Length = 734

 Score =  346 bits (887), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 199/491 (40%), Positives = 291/491 (59%), Gaps = 50/491 (10%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           SYLS   +  V +A + A  AH  Q R+SGEP+IIHP++VA IL +LE+D  +IA G LH
Sbjct: 18  SYLSDEHIAFVEKAYLYAEGAHREQYRKSGEPYIIHPIQVAGILVDLEMDPSTIAGGFLH 77

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT+V T + ++E F   V  +V+G   V+KLGK+K K    S ++ +A++ R+MF+
Sbjct: 78  DVVEDTDV-TLDDLKEAFSEEVAMLVDG---VTKLGKIKYK----SQEEQQAENHRKMFV 129

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM +++RVI++KLADRLHNMRTL H+P  KQ  I+ ETL++FAPLA  LG+ +IK ELE+
Sbjct: 130 AMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRISNETLEIFAPLAHRLGISKIKWELED 189

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
            +  Y N + Y ++   +     E E  +EE    + K++E+      + +K +     K
Sbjct: 190 TALRYLNPQQYYRIVNLMKKKRAERELYVEEVVNEVKKRVEE------VNIKADFSGRPK 243

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIY+ ++      NE+  +  +RI            L +  + CY VLG++H  W P
Sbjct: 244 HIYSIYRKMVLQNKQFNEIYDLLAVRI------------LVNSIKDCYAVLGIIHTCWKP 291

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PKPN YQSLHTT+I    +    LEVQIRT EM  IAE G+AAH++ + 
Sbjct: 292 MPGRFKDYIAMPKPNMYQSLHTTVIGPKGDP---LEVQIRTFEMHEIAEYGVAAHWAYK- 347

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                 G A   G            A    ++SW   I E+Q E   +  + EF++++  
Sbjct: 348 -----EGKAANEG------------ATFEKKLSWFREILEFQNE---STDAEEFMESLKI 387

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           DL    V+VFTP+G++  LP G+  +D++Y IH+EIGNK + AKVNG +V+  H L   +
Sbjct: 388 DLFSDMVYVFTPKGDVIELPSGSVPIDFSYRIHSEIGNKTIGAKVNGKMVTLDHKLRTGD 447

Query: 619 VVEIITYNVSF 629
           +VEI+T   S+
Sbjct: 448 IVEILTSKHSY 458


>gi|357236902|ref|ZP_09124245.1| putative bifunctional (P)ppGpp synthase/hydrolase RelA
           [Streptococcus criceti HS-6]
 gi|356884884|gb|EHI75084.1| putative bifunctional (P)ppGpp synthase/hydrolase RelA
           [Streptococcus criceti HS-6]
          Length = 740

 Score =  345 bits (886), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 191/492 (38%), Positives = 302/492 (61%), Gaps = 49/492 (9%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           +Y++P ++ LV++AL  A EAH  Q+R+SGEP+IIHP++VA IL +L+LD  ++A G LH
Sbjct: 18  TYMAPADVALVQKALDYATEAHKTQRRQSGEPYIIHPIQVAGILADLQLDAVTVACGFLH 77

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT V T E +E +FG  V +IV+G   V+KLGK+K K+    +    A++ R+M +
Sbjct: 78  DVVEDTEV-TLEDLERDFGLKVSQIVDG---VTKLGKVKYKSHEEQL----AENHRKMLM 129

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM++++RVI+VKLADRLHNMRTL H+ P KQ  I+ ET++++APLA  LG+  IK ELE+
Sbjct: 130 AMSKDIRVILVKLADRLHNMRTLKHLRPDKQKRISRETMEIYAPLAHRLGISAIKWELED 189

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
           L+F Y N  ++ K+   + +  +E E  ++E    +++KI++  +     +  +I    K
Sbjct: 190 LAFRYLNEVEFYKISHMMHEKRRERESLVDE----IVEKIKN--YTAEQGLHGKIYGRPK 243

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIY+ +   +   +++  +  +R I           + +P  + Y +LG +H +W P
Sbjct: 244 HIYSIYRKMRDKKKRFDQIYDLIAIRCI-----------MDTPSDV-YAMLGYIHELWRP 291

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PK NGYQS+HTT    +Y     +E+QIRT+EM  +AE G+AAH++ + 
Sbjct: 292 MPGRFKDYIANPKSNGYQSIHTT----VYGPKGPIEIQIRTQEMHEVAEYGVAAHWAYKK 347

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
            + G V                 +    A+ ++W+  + E Q    G+  ++EFVD++  
Sbjct: 348 GIKGKV-----------------DAQESAIGMNWIQDLVELQAGSNGD--AQEFVDSVKE 388

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           D+  +R++VFTP G+++ LP+ +  +D+AY IHT++G K V AKVNG +V  T  L   +
Sbjct: 389 DIFSARIYVFTPSGDVQELPRDSGPIDFAYAIHTQVGEKAVGAKVNGRMVPLTAKLKTGD 448

Query: 619 VVEIITYNVSFS 630
           VVEI+T   SF 
Sbjct: 449 VVEIVTNQNSFG 460


>gi|392394513|ref|YP_006431115.1| RelA/SpoT family (p)ppGpp synthetase [Desulfitobacterium
           dehalogenans ATCC 51507]
 gi|390525591|gb|AFM01322.1| (p)ppGpp synthetase, RelA/SpoT family [Desulfitobacterium
           dehalogenans ATCC 51507]
          Length = 726

 Score =  345 bits (886), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 197/492 (40%), Positives = 290/492 (58%), Gaps = 50/492 (10%)

Query: 133 DLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESI 192
           +L   +  +SP  ++LV +A   A EAH GQ R SGE +I HP+EVA+IL ELE+D  +I
Sbjct: 5   ELMEKLHKVSPEGIKLVEKAYSFAEEAHRGQLRNSGEEYIQHPLEVAKILSELEMDEATI 64

Query: 193 AAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADD 252
           AA  LHD VEDT   T E IE EFG+ V  +V+G   V+KLG+++ K    S ++++ ++
Sbjct: 65  AAAFLHDVVEDTKY-TIEDIEREFGSQVAILVDG---VTKLGRIEYK----SKEELQVEN 116

Query: 253 LRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQI 312
           LR+MFLAM +++RVI++KLADRLHNMRTL      KQ  IA ETL++FAPLA  LG+++I
Sbjct: 117 LRKMFLAMAKDIRVILIKLADRLHNMRTLKFHSEKKQKEIAQETLEIFAPLANRLGIFRI 176

Query: 313 KSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTE 372
           K ELE+LSF Y   ++Y  +   +A    E E ++ E    L K++ +      + +K +
Sbjct: 177 KWELEDLSFRYLKPQEYYDLSEGIALKRAEREVQINEVITQLSKRLTE------VGIKAD 230

Query: 373 IRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLV 432
           I    K  YSIY+ ++     ++E+  +  +R+I+                 CY  LG++
Sbjct: 231 ISGRPKHFYSIYRKMITQHRELSEIYDLTAVRVIV------------DSVNDCYGALGII 278

Query: 433 HGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAA 492
           H +W P+P   KDYIA PKPN YQSLHTTL+    E     E+QIRT EM   AE GIAA
Sbjct: 279 HTMWKPLPGRFKDYIAMPKPNMYQSLHTTLVGAHGEP---FEIQIRTWEMHRTAEYGIAA 335

Query: 493 HYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREF 552
           H+  +       G  +P G             N   ++SWL  + EWQ +   +  + EF
Sbjct: 336 HWKYK------EGAGKPVG------------GNFEQKLSWLRQLLEWQHD---SRDAGEF 374

Query: 553 VDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTH 612
           ++++  DL    VFVFTP+G++  LP G+  +D+AY +HT++G++ V AK+N  +V    
Sbjct: 375 MESLRIDLFADTVFVFTPKGDVVELPAGSCPIDFAYRVHTDVGHRCVGAKINSRIVPLET 434

Query: 613 VLANAEVVEIIT 624
            L N ++VEI+T
Sbjct: 435 KLTNGDIVEILT 446


>gi|256845985|ref|ZP_05551443.1| GTP pyrophosphokinase [Fusobacterium sp. 3_1_36A2]
 gi|256719544|gb|EEU33099.1| GTP pyrophosphokinase [Fusobacterium sp. 3_1_36A2]
          Length = 724

 Score =  345 bits (886), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 194/498 (38%), Positives = 300/498 (60%), Gaps = 62/498 (12%)

Query: 131 WEDLRPTISYLSPNELEL----VRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELE 186
           WE L   +     N L L    ++ AL  A E+H GQ R+SG+ +I+HPVEVA+IL +++
Sbjct: 4   WEQL---LDKAKANHLNLDFDKIKLALGFAEESHQGQYRKSGDDYIVHPVEVAKILMDMK 60

Query: 187 LDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQ 246
           +D ++I AGLLHD VEDT ++    I+  FG TV  +V+G   V+KL  L    +N    
Sbjct: 61  MDTDTIVAGLLHDVVEDT-LIPIADIKYNFGDTVATLVDG---VTKLKALPNGTKN---- 112

Query: 247 DVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKL 306
             +A+++R+M LAM E +RVI++KLADRLHNMRTL  M P KQ SI+ ETL ++APLA  
Sbjct: 113 --QAENIRKMILAMAENIRVILIKLADRLHNMRTLKFMKPEKQQSISKETLDIYAPLAHR 170

Query: 307 LGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDL 366
           LGM ++KSELE+L+F Y + +++ ++K+ V +  +E +  +E   + +++ + +      
Sbjct: 171 LGMAKVKSELEDLAFSYLHHDEFLEIKKLVDNTKEERKDYIENFIRTMIRTLSE------ 224

Query: 367 MTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICY 426
           + +K E++   K  YSIYK + +     +++  +  +R+I+  K              CY
Sbjct: 225 LGIKAEVKGRFKHFYSIYKKMYQKGKEFDDIYDLMGVRVIVDDKAT------------CY 272

Query: 427 HVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIA 486
           HVLG+VH  +TP+P   KDYIA PK N YQS+HTT++  L +    +E+QIRT++MD IA
Sbjct: 273 HVLGIVHSQYTPVPGRFKDYIAVPKSNNYQSIHTTIVGPLGKF---IEIQIRTKDMDKIA 329

Query: 487 ERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGN 546
           E GIAAH++            + N +S +   +            WL  I E+Q E   +
Sbjct: 330 EEGIAAHWN-----------YKENKKSSKDDNIY----------GWLRHIIEFQNE---S 365

Query: 547 MTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGN 606
            ++ +F++ +T D+    VF F+P+G+I  LP GAT +D+A+M+HT++G K V AKVNG 
Sbjct: 366 DSTEDFIEGVTGDIDRGTVFTFSPKGDIIELPVGATALDFAFMVHTQVGCKCVGAKVNGR 425

Query: 607 LVSPTHVLANAEVVEIIT 624
           +V+  H L + + VEIIT
Sbjct: 426 MVTIDHKLKSGDKVEIIT 443


>gi|311069245|ref|YP_003974168.1| GTP pyrophosphokinase RelA/SpoT [Bacillus atrophaeus 1942]
 gi|419820104|ref|ZP_14343718.1| GTP pyrophosphokinase RelA/SpoT [Bacillus atrophaeus C89]
 gi|310869762|gb|ADP33237.1| GTP pyrophosphokinase RelA/SpoT [Bacillus atrophaeus 1942]
 gi|388475754|gb|EIM12463.1| GTP pyrophosphokinase RelA/SpoT [Bacillus atrophaeus C89]
          Length = 734

 Score =  345 bits (886), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 197/491 (40%), Positives = 291/491 (59%), Gaps = 50/491 (10%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           SYL+   +  V +A + A +AH  Q R+SGEP+IIHP++VA IL +LE+D  +IA G LH
Sbjct: 18  SYLTDEHIAFVEKAYLYAEDAHREQYRKSGEPYIIHPIQVAGILVDLEMDPSTIAGGFLH 77

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT+V T + ++E F   V  +V+G   V+KLGK+K K    S ++ +A++ R+MF+
Sbjct: 78  DVVEDTDV-TLDDLKEAFSEEVAMLVDG---VTKLGKIKYK----SQEEQQAENHRKMFV 129

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM +++RVI++KLADRLHNMRTL H+P  KQ  I+ ETL++FAPLA  LG+ +IK ELE+
Sbjct: 130 AMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRISNETLEIFAPLAHRLGISKIKWELED 189

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
            +  Y N + Y ++   +     E E+ +EE    +  ++E+      + +  +     K
Sbjct: 190 TALRYLNPQQYYRIVNLMKKKRAEREQYVEEVVDEVKNRVEE------VNISADFSGRPK 243

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIY+ ++      NE+  +  +RI+        VG +      CY VLG++H  W P
Sbjct: 244 HIYSIYRKMVLQNKQFNEIYDLLAVRIL--------VGSIKD----CYAVLGIIHTCWKP 291

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PKPN YQSLHTT+I    +    LEVQIRT EM  IAE G+AAH+    
Sbjct: 292 MPGRFKDYIAMPKPNMYQSLHTTVIGPKGDP---LEVQIRTFEMHEIAEYGVAAHW---- 344

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                   A   G++          A    ++SW   I E+Q E   +  + EF++++  
Sbjct: 345 --------AYKEGKAAN------EEATFEKKLSWFREILEFQNE---STDAEEFMESLKI 387

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           DL    VFVFTP+G++  LP G+  +D++Y IH+EIGNK + AKVNG +V+  H L   +
Sbjct: 388 DLFSDMVFVFTPKGDVIELPSGSVPIDFSYRIHSEIGNKTIGAKVNGKMVTLDHKLRTGD 447

Query: 619 VVEIITYNVSF 629
           +VEI+T   S+
Sbjct: 448 IVEILTSKHSY 458


>gi|312621838|ref|YP_004023451.1| (p)ppgpp synthetase i, spot/rela [Caldicellulosiruptor
           kronotskyensis 2002]
 gi|312202305|gb|ADQ45632.1| (p)ppGpp synthetase I, SpoT/RelA [Caldicellulosiruptor
           kronotskyensis 2002]
          Length = 726

 Score =  345 bits (886), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 200/508 (39%), Positives = 300/508 (59%), Gaps = 67/508 (13%)

Query: 125 DSPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
           D  ++L E +     Y S  ++ L+++A   A + HDGQ R SGEP+I+HP+EVA IL +
Sbjct: 4   DLSDKLNELIERVKKYASEEDINLIKKAFEFAQKHHDGQSRNSGEPYILHPLEVALILAD 63

Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
           LELD  SI AGLLHD VEDT+  + E +E EFG  +  +V+G   V+KLGKL    E  S
Sbjct: 64  LELDIPSIVAGLLHDVVEDTSA-SLEDVEREFGKEIAELVDG---VTKLGKL----EFTS 115

Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
             + + ++ R+M +AM +++RVI++KLADRLHNMRTL ++PP KQ   A ET+ ++APLA
Sbjct: 116 KLERQVENYRKMLIAMAKDIRVILIKLADRLHNMRTLKYLPPEKQRQKAQETIDIYAPLA 175

Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
             LG+ +IK ELE+LS  Y + E Y  +  ++A    E E+ ++    ++ +K+++    
Sbjct: 176 HRLGISKIKWELEDLSLRYLDPEGYYDLVEKIAKKRVEREEYIKRIISLISEKLKE---- 231

Query: 365 DLMTVKTEIRSVCKEP---YSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSP 421
                  E+  +   P   YSIY+ + +   ++ E+  +  +RII+            + 
Sbjct: 232 ----ANIEVGQIDGRPKHFYSIYRKMKEQGKTLEEIYDLFAIRIIV------------NS 275

Query: 422 QQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQ 476
            + CY VLG++H ++ P+P   KDYIA PKPN YQSLHTT+I     PF        EVQ
Sbjct: 276 VKDCYGVLGIIHTLFKPMPGRFKDYIAMPKPNMYQSLHTTVIGPEGEPF--------EVQ 327

Query: 477 IRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAI 536
           IRT +M   AE GIAAH+  +             GR        + + +   + +WL  +
Sbjct: 328 IRTFDMHRTAEYGIAAHWKYK------------EGR--------IKSTDEDEKFAWLREL 367

Query: 537 REWQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGN 596
            EWQ+E      ++EF++++  +L    VFVFTP+G++ +LP+G+T +D+AY IH+EIGN
Sbjct: 368 LEWQKEL---KDAKEFMESLKINLFSDEVFVFTPKGDVISLPQGSTPIDFAYAIHSEIGN 424

Query: 597 KMVAAKVNGNLVSPTHVLANAEVVEIIT 624
           KM  AKVNG LV   + L N ++VEIIT
Sbjct: 425 KMAGAKVNGKLVPIDYELKNGDIVEIIT 452


>gi|373857672|ref|ZP_09600413.1| RelA/SpoT family protein [Bacillus sp. 1NLA3E]
 gi|372452804|gb|EHP26274.1| RelA/SpoT family protein [Bacillus sp. 1NLA3E]
          Length = 731

 Score =  345 bits (886), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 200/494 (40%), Positives = 300/494 (60%), Gaps = 52/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T +YL+   +E+V++A   A  AH  Q R+SGEP+IIHP++VA IL +LE+D E++AAG 
Sbjct: 16  TKAYLNVEHVEMVKKAYDFAKHAHRDQYRKSGEPYIIHPIQVAGILADLEMDPETVAAGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT+V T E I+  F   V  +V+G   V+KLGK+K K    S ++ +A++ R+M
Sbjct: 76  LHDVVEDTSV-TLEDIKTAFNDEVAMLVDG---VTKLGKIKYK----SHEEQQAENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
           F+AM +++RVI++KLADRLHNMRTL H+P  KQ  I+ ETL++FAPLA  LG+ ++K EL
Sbjct: 128 FVAMAQDIRVILIKLADRLHNMRTLKHLPFEKQRRISNETLEIFAPLAHRLGISKVKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQF-LDLMTVKTEIRS 375
           E+ +  Y N + Y     R+ +L K+   E E+    L+  IE+ +  +  +++K E+  
Sbjct: 188 EDTALRYLNPQQYY----RIVNLMKKKRAEREQ---YLVDVIEEVRARMGEVSIKAELSG 240

Query: 376 VCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGI 435
             K  YSIY+ +       NE+  +  +RII+            +  + CY VLG++H  
Sbjct: 241 RPKHIYSIYRKMALQNKQFNEIYDLLAVRIIV------------NSIKDCYAVLGIIHTC 288

Query: 436 WTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYS 495
           W P+P   KDYIA PKPN YQSLHTT+I    +    LEVQIRT EM  IAE GIAAH++
Sbjct: 289 WKPMPGRFKDYIAMPKPNMYQSLHTTVIGPKGDP---LEVQIRTSEMHEIAEFGIAAHWA 345

Query: 496 GRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDT 555
            +                  GK+   + ++   +++W   I E+Q E      + EF+++
Sbjct: 346 YK-----------------EGKSAS-DISSYEAKLTWFREILEFQNE---TDDAEEFMES 384

Query: 556 ITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLA 615
           +  DL    VFVFTP+G++  LP G+  +D++Y IH+EIGNK + AKVNG +V+  + L 
Sbjct: 385 LKIDLFSDMVFVFTPKGDVIELPAGSVPIDFSYRIHSEIGNKTIGAKVNGKMVTLDYKLK 444

Query: 616 NAEVVEIITYNVSF 629
             +++EI+T   S+
Sbjct: 445 TGDIIEILTSKHSY 458


>gi|146296035|ref|YP_001179806.1| (p)ppGpp synthetase I SpoT/RelA [Caldicellulosiruptor
           saccharolyticus DSM 8903]
 gi|145409611|gb|ABP66615.1| (p)ppGpp synthetase I, SpoT/RelA [Caldicellulosiruptor
           saccharolyticus DSM 8903]
          Length = 722

 Score =  345 bits (886), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 200/508 (39%), Positives = 304/508 (59%), Gaps = 70/508 (13%)

Query: 125 DSPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
           D  E+L E ++    Y +  ++ L+++A   A + HDGQ+R SGEP+I+HP+EVA IL +
Sbjct: 3   DKFEQLIEKVK---KYATEEDVNLIKKAYEFAKKYHDGQERSSGEPYIVHPLEVALILAD 59

Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
           LELD  SI AGLLHD VEDT+  + + IE+EFG  +  +V+G   V+KLGKL    E  S
Sbjct: 60  LELDIASIVAGLLHDVVEDTSA-SPQEIEQEFGGEIASLVDG---VTKLGKL----EFTS 111

Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
             + +A++ R+M +AM +++RVI++KLADRLHNMRTL ++PP KQ   A ET+ ++APLA
Sbjct: 112 KLEQQAENYRKMLIAMAKDIRVILIKLADRLHNMRTLKYLPPEKQRQKAQETIDIYAPLA 171

Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
             LG+ +IK ELE+L+  Y + E Y  +  ++A    E E+ ++    ++ +K+++    
Sbjct: 172 HRLGISKIKWELEDLALRYLDPEGYYDLVEKIAKKRVEREEYIQRIINLISEKLKE---- 227

Query: 365 DLMTVKTEIRSVCKEP---YSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSP 421
                  E+  +   P   YSIY+ + +   ++ E+  +  +RII+            + 
Sbjct: 228 ----ANIEVGQIDGRPKHFYSIYRKMKQQGKTLEEIYDLFAIRIIV------------NS 271

Query: 422 QQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQ 476
            + CY VLG++H ++ P+P   KDYIA PKPN YQSLHTT+I     PF        EVQ
Sbjct: 272 VKDCYGVLGIIHTLFKPMPGRFKDYIAMPKPNMYQSLHTTVIGPEGEPF--------EVQ 323

Query: 477 IRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAI 536
           IRT +M   AE GIAAH+  +             GR        + + +   + +WL  +
Sbjct: 324 IRTFDMHRTAEYGIAAHWKYK------------EGR--------IKSTDEDEKFAWLREL 363

Query: 537 REWQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGN 596
            EWQ+E      ++EF++++  +L    VFVFTP+G++ +LP+G+T +D+AY IH+EIGN
Sbjct: 364 LEWQKEL---KDAKEFMESLKINLFSDEVFVFTPKGDVISLPQGSTPIDFAYAIHSEIGN 420

Query: 597 KMVAAKVNGNLVSPTHVLANAEVVEIIT 624
           KM  AKVNG LV   + L N ++VEIIT
Sbjct: 421 KMAGAKVNGKLVPIDYELKNGDIVEIIT 448


>gi|375087257|ref|ZP_09733639.1| RelA/SpoT family protein [Megamonas funiformis YIT 11815]
 gi|374562074|gb|EHR33409.1| RelA/SpoT family protein [Megamonas funiformis YIT 11815]
          Length = 740

 Score =  345 bits (885), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 202/504 (40%), Positives = 295/504 (58%), Gaps = 49/504 (9%)

Query: 122 FKEDSPERLWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVAR 180
            K D+ +   +D+  T+   +P    +L+ +A  LA+EAH  QKR SGE +I HP+ VA 
Sbjct: 1   MKTDNMDITIDDIINTVKSYNPQANFDLITKAYNLAYEAHADQKRISGEMYITHPLHVAM 60

Query: 181 ILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKN 240
           IL +L +D  +IAA LLHD VEDT + T E+++E FG  V  +++G TK+SK+ K K K 
Sbjct: 61  ILTDLHIDEVTIAAALLHDVVEDT-IYTIEQMKELFGEEVAMLIDGVTKLSKM-KYKSK- 117

Query: 241 ENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVF 300
                +D + +  R+MFLAM +++RVI++KLADRLHNMRTL +M   KQ  IA ETL+V+
Sbjct: 118 -----EDQQLETYRKMFLAMAKDIRVIMIKLADRLHNMRTLKYMREEKQKRIAKETLEVY 172

Query: 301 APLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIED 360
           APLA  LG+  IK ELE+L   Y   E Y  +  +V    +E +  + +A    + KI+ 
Sbjct: 173 APLANRLGISNIKWELEDLCLRYLEPETYYDLVDKVNQKREERQGFINDA----VAKIQ- 227

Query: 361 DQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCS 420
            Q  D + +K EI+   K  YSIY+ + KS   I+++  +  +R++++  P         
Sbjct: 228 -QEFDKIHLKGEIKGRAKHFYSIYRKMKKSNKDISDIFDLLAVRVLVQTIPD-------- 278

Query: 421 PQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTE 480
               CY VLG++H +W P+P   KDYIA PK NGYQSLHTT+I    ++   LE+QIRT 
Sbjct: 279 ----CYTVLGIIHAMWKPLPGRFKDYIAVPKTNGYQSLHTTVIT---DNGLPLEIQIRTF 331

Query: 481 EMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQ 540
            M  I+E GIAAH+  +      +G                 N+    ++SWL  +   Q
Sbjct: 332 AMHAISEYGIAAHWKYKEAGNKSIGA----------------NSEYDKKLSWLRQMITLQ 375

Query: 541 EEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVA 600
           +EF      RE+ + +  D+    VFV+TPRG++ NLPKG+  +D+AY IHT+IGN  V 
Sbjct: 376 DEFSD---PREYFEALKIDIFSDEVFVYTPRGDVINLPKGSNPIDFAYHIHTDIGNHCVG 432

Query: 601 AKVNGNLVSPTHVLANAEVVEIIT 624
           AKVNG +V   + L N ++V +IT
Sbjct: 433 AKVNGKIVPLEYTLQNGDIVSVIT 456


>gi|421144446|ref|ZP_15604359.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
           [Fusobacterium nucleatum subsp. fusiforme ATCC 51190]
 gi|395489103|gb|EJG09945.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
           [Fusobacterium nucleatum subsp. fusiforme ATCC 51190]
          Length = 724

 Score =  345 bits (885), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 194/498 (38%), Positives = 300/498 (60%), Gaps = 62/498 (12%)

Query: 131 WEDLRPTISYLSPNELEL----VRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELE 186
           WE L   +     N L L    ++ AL  A E+H GQ R+SG+ +I+HPVEVA+IL +++
Sbjct: 4   WEQL---LDKAKANHLNLDFDKIKLALGFAEESHQGQYRKSGDDYIVHPVEVAKILMDMK 60

Query: 187 LDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQ 246
           +D ++I AGLLHD VEDT ++    I+  FG TV  +V+G   V+KL  L    +N    
Sbjct: 61  MDTDTIVAGLLHDVVEDT-LIPIADIKYNFGDTVATLVDG---VTKLKALPNGTKN---- 112

Query: 247 DVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKL 306
             +A+++R+M LAM E +RVI++KLADRLHNMRTL  M P KQ SI+ ETL ++APLA  
Sbjct: 113 --QAENIRKMILAMAENIRVILIKLADRLHNMRTLKFMKPEKQQSISKETLDIYAPLAHR 170

Query: 307 LGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDL 366
           LGM ++KSELE+L+F Y + +++ ++K+ V +  +E +  +E   + +++ + +      
Sbjct: 171 LGMAKVKSELEDLAFSYLHHDEFLEIKKLVDNTKEERKDYIENFIRTMIRTLSE------ 224

Query: 367 MTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICY 426
           + +K E++   K  YSIYK + +     +++  +  +R+I+  K              CY
Sbjct: 225 LGIKAEVKGRFKHFYSIYKKMYQKGKEFDDIYDLMGVRVIVDDKAT------------CY 272

Query: 427 HVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIA 486
           HVLG+VH  +TP+P   KDYIA PK N YQS+HTT++  L +    +E+QIRT++MD IA
Sbjct: 273 HVLGIVHSQYTPVPGRFKDYIAVPKSNNYQSIHTTIVGPLGKF---IEIQIRTKDMDEIA 329

Query: 487 ERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGN 546
           E GIAAH++            + N +S +   +            WL  I E+Q E   +
Sbjct: 330 EEGIAAHWN-----------YKENKKSSKDDNIY----------GWLRHIIEFQNE---S 365

Query: 547 MTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGN 606
            ++ +F++ +T D+    VF F+P+G+I  LP GAT +D+A+M+HT++G K V AKVNG 
Sbjct: 366 DSTEDFIEGVTGDIDRGTVFTFSPKGDIIELPVGATALDFAFMVHTQVGCKCVGAKVNGR 425

Query: 607 LVSPTHVLANAEVVEIIT 624
           +V+  H L + + VEIIT
Sbjct: 426 MVTIDHKLKSGDKVEIIT 443


>gi|334341782|ref|YP_004546762.1| RelA/SpoT family protein [Desulfotomaculum ruminis DSM 2154]
 gi|334093136|gb|AEG61476.1| RelA/SpoT family protein [Desulfotomaculum ruminis DSM 2154]
          Length = 723

 Score =  345 bits (885), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 197/499 (39%), Positives = 294/499 (58%), Gaps = 52/499 (10%)

Query: 130 LWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDW 189
           L+E  +  + Y    ++  +R+A   A  AH GQKR SGE +I+HP+ ++ IL EL+LD 
Sbjct: 4   LFELEQKVLVYNPSADIAFLRKAYNFAENAHRGQKRISGEDYIVHPLAISIILAELQLDL 63

Query: 190 ESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVK 249
           +++AAGLLHD VEDT + T   IE  FG  V  +V+G   V+KLGKL+ +N+    ++ +
Sbjct: 64  QTVAAGLLHDVVEDTGI-TLTDIESNFGPEVANMVDG---VTKLGKLQFQNK----EERQ 115

Query: 250 ADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGM 309
           A++LR+MFLAM +++RVI++KLADRLHN+RTL      KQ  +A ETL  FAPLA  LG+
Sbjct: 116 AENLRKMFLAMAKDIRVILIKLADRLHNLRTLQFQSERKQKEVAEETLMFFAPLAHRLGI 175

Query: 310 YQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTV 369
           Y+IK ELE+LSF Y   E Y ++K ++A    + E+ ++E  K L +K      L  + +
Sbjct: 176 YKIKWELEDLSFRYKEPEQYQRMKVQIAKSRVKREEHIQEVIKELGEK------LAAVNI 229

Query: 370 KTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVL 429
           KTEI+   K  YSIY+ +++ +  + ++  +  +R+            L S  + CY  L
Sbjct: 230 KTEIQGRPKNLYSIYQKMMEQQKELKDIFDVQAVRV------------LVSTVKDCYGAL 277

Query: 430 GLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERG 489
           G+ H +W PIP   KDYIA PK N YQSLHTT+I    E    +E+QIRT EM  +AE G
Sbjct: 278 GIAHTLWKPIPGRFKDYIAMPKSNMYQSLHTTVIGPQGEP---VEIQIRTWEMHKVAEYG 334

Query: 490 IAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTS 549
           IAAH+                    R K       +   +++WL  + ++Q +      +
Sbjct: 335 IAAHW--------------------RYKEGGRGEGDFDKKLAWLRQMMDFQHD---ARDA 371

Query: 550 REFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVS 609
           +EF++ +  DL    VFVFTP+G++  LP G T +D+AY IHT++G++ V AK+NG +V 
Sbjct: 372 QEFMENLKIDLFSHSVFVFTPKGDVMELPAGTTPIDFAYRIHTDVGHRTVGAKINGRIVP 431

Query: 610 PTHVLANAEVVEIITYNVS 628
             + L N  ++EIIT   S
Sbjct: 432 LDYKLKNGNIIEIITSKAS 450


>gi|451819384|ref|YP_007455585.1| GTP pyrophosphokinase RelA [Clostridium saccharoperbutylacetonicum
           N1-4(HMT)]
 gi|451785363|gb|AGF56331.1| GTP pyrophosphokinase RelA [Clostridium saccharoperbutylacetonicum
           N1-4(HMT)]
          Length = 737

 Score =  345 bits (885), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 198/482 (41%), Positives = 289/482 (59%), Gaps = 48/482 (9%)

Query: 145 ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDT 204
           ++++V++A   A +AH  QKR+SGEP+IIHP+ VA IL EL +D  +I AGLLHD +EDT
Sbjct: 17  DIDMVKKAYYFAEDAHKEQKRQSGEPYIIHPIAVAEILAELGMDTNTIVAGLLHDVIEDT 76

Query: 205 NVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEV 264
              ++E   + F   +  ++EG TK+++LG+++ K +    ++ +AD++R+M LAM +++
Sbjct: 77  EF-SYEETVKLFNEEIGNLIEGVTKLTRLGEMEYKTK----EEQQADNVRKMLLAMAKDI 131

Query: 265 RVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYT 324
           RVII+KLADRLHNMRTL  MP  KQ + A ETL ++APLA  LGM +IK ELE+L F Y 
Sbjct: 132 RVIIIKLADRLHNMRTLKFMPEKKQKNKAKETLDIYAPLAHRLGMSKIKWELEDLCFRYL 191

Query: 325 NAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT--VKTEIRSVCKEPYS 382
           + ++Y ++   +A      EK +E    I  K I DD +  L    ++++I    K  YS
Sbjct: 192 HEKEYYELVDSIA------EKRVERETYI--KDIVDDLYAKLQAAGIESDIDGRPKHFYS 243

Query: 383 IYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRA 442
           IYK ++    SI ++  +  +RI            L +  + CY VLG+VH I+ PIP  
Sbjct: 244 IYKKMVNKNKSIEQIFDLTAIRI------------LVNSVKDCYGVLGIVHTIYRPIPGR 291

Query: 443 MKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTG 502
            KDYIA PKPN YQSLHTT+I    ++    E+QIRT EM   AE GIAAH+  +     
Sbjct: 292 FKDYIAMPKPNMYQSLHTTVIGPQGKT---FEIQIRTFEMHKTAEYGIAAHWKYK----- 343

Query: 503 LVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLG 562
                   G + +G+       +   ++ WL  + EWQ+E      + EF++    DL  
Sbjct: 344 -------EGDTSKGED---KQKDFEKKLVWLRDMLEWQKE---TSDAEEFIEGFKIDLFS 390

Query: 563 SRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEI 622
             VFVFTP+G + NL + AT +D+AY IHT++GNK V AKVNG +V   + L   E+VEI
Sbjct: 391 DEVFVFTPKGVVINLCRDATPIDFAYRIHTDVGNKCVGAKVNGKIVPLDYTLKTGEIVEI 450

Query: 623 IT 624
           +T
Sbjct: 451 LT 452


>gi|422933491|ref|ZP_16966411.1| GTP diphosphokinase [Fusobacterium nucleatum subsp. animalis ATCC
           51191]
 gi|339891612|gb|EGQ80570.1| GTP diphosphokinase [Fusobacterium nucleatum subsp. animalis ATCC
           51191]
          Length = 552

 Score =  345 bits (885), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 193/498 (38%), Positives = 301/498 (60%), Gaps = 62/498 (12%)

Query: 131 WEDLRPTISYLSPNELEL----VRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELE 186
           WE L   +     N L L    ++ AL  A E+H GQ R+SG+ +I+HPVEVA+IL +++
Sbjct: 4   WEQL---LDKAKANHLNLDFDKIKLALGFAEESHQGQYRKSGDDYIVHPVEVAKILMDMK 60

Query: 187 LDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQ 246
           +D ++I AGLLHD VEDT ++    I+  FG TV  +V+G   V+KL  L    +N    
Sbjct: 61  MDTDTIVAGLLHDVVEDT-LIPIADIKYNFGDTVATLVDG---VTKLKALPNGTKN---- 112

Query: 247 DVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKL 306
             +A+++R+M LAM E +RVI++KLADRLHNMRTL  M P KQ SI+ ETL ++APLA  
Sbjct: 113 --QAENIRKMILAMAENIRVILIKLADRLHNMRTLKFMKPEKQQSISKETLDIYAPLAHR 170

Query: 307 LGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDL 366
           LGM ++KSELE+++F Y + +++ ++KR V +  +E +  +E   + +++ + +      
Sbjct: 171 LGMAKVKSELEDIAFSYLHHDEFLEIKRLVDNTKEERKDYIENFIRTMIRTLSE------ 224

Query: 367 MTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICY 426
           + +K E++   K  YSIY+ + +     +++  +  +R+I++ K              CY
Sbjct: 225 LGIKAEVKGRFKHFYSIYRKMYQKGKDFDDIYDLMGVRVIVEDKAT------------CY 272

Query: 427 HVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIA 486
           HVLG+VH  +TP+P   KDYIA PK N YQS+HTT++  L +    +E+QIRT++MD IA
Sbjct: 273 HVLGIVHSQYTPVPGRFKDYIAVPKSNNYQSIHTTIVGPLGKF---IEIQIRTKDMDDIA 329

Query: 487 ERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGN 546
           E GIAAH++            + N +S +   +            WL  I E+Q E   +
Sbjct: 330 EEGIAAHWN-----------YKENKKSSKDDNIY----------GWLRHIIEFQNE---S 365

Query: 547 MTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGN 606
            ++ +F++ +T D+    VF F+P+G+I  LP GAT +D+A+M+HT++G K V AKVNG 
Sbjct: 366 DSTEDFIEGVTGDIDRGTVFTFSPKGDIIELPVGATALDFAFMVHTQVGCKCVGAKVNGR 425

Query: 607 LVSPTHVLANAEVVEIIT 624
           +V+  H L + + VEIIT
Sbjct: 426 MVTIDHKLKSGDKVEIIT 443


>gi|376294946|ref|YP_005166176.1| (p)ppGpp synthetase I SpoT/RelA [Desulfovibrio desulfuricans ND132]
 gi|323457507|gb|EGB13372.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfovibrio desulfuricans
           ND132]
          Length = 737

 Score =  345 bits (885), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 203/486 (41%), Positives = 292/486 (60%), Gaps = 45/486 (9%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           SY+   +L+L++RA + + +AHDG  RRSGEP+I HP+ VA +L +++LD  ++AAGLLH
Sbjct: 13  SYIKDPDLDLIQRAYVFSAQAHDGVVRRSGEPYISHPMNVAYLLADMQLDEATVAAGLLH 72

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           DTVEDT+  T + IEE FG+ V  IV+G TK+S++       E+ +VQ  +A+++R++ L
Sbjct: 73  DTVEDTDT-TVDEIEELFGSDVADIVDGVTKISRM-----DFESKAVQ--QAENIRKLIL 124

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM E++RV++VKLADRLHNMRTL +M P KQ  IA ET  ++APLA  LG++++K+ELE+
Sbjct: 125 AMAEDIRVLMVKLADRLHNMRTLEYMKPVKQRLIAQETQDIYAPLANRLGLHRVKTELED 184

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
           L   Y   + YA++   V     EH    E     ++  I D   L    +K  +    K
Sbjct: 185 LCLRYLRPDVYAQLSEAV----HEHRAAGEPYIDKVIGLITD--MLKKNKIKGRVFGRTK 238

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             +SI   + +   + +E+  +   R+I        VG L    + CY VLGL+H  W P
Sbjct: 239 HLHSIQVKMEQQGLTFDEIYDLIAFRVI--------VGSL----KDCYAVLGLIHAAWRP 286

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYI+ PK N YQSLHTT++    E   R+E+QIRTEEM  IAE G+AAH+  + 
Sbjct: 287 VPGRFKDYISIPKANMYQSLHTTVMGPDGE---RIEIQIRTEEMHRIAEYGVAAHWQYKE 343

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
              G          + +GKT    +A    R +WL  I +WQ E       REF+ ++  
Sbjct: 344 VGKG----------AKKGKTAGRRDAE---RYTWLKQIMDWQREL---SDPREFMSSLRL 387

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           ++    V+VFTP G+IK LP GAT VD+AY IH+E+G+K   AKVNG +V   + L N +
Sbjct: 388 EMFQDEVYVFTPNGDIKELPDGATPVDFAYSIHSEVGDKCAGAKVNGRIVPLQYRLQNGD 447

Query: 619 VVEIIT 624
            VEIIT
Sbjct: 448 SVEIIT 453


>gi|75760574|ref|ZP_00740607.1| GTP pyrophosphokinase / Guanosine-3',5'-bis(Diphosphate)
           3'-pyrophosphohydrolase [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|74491943|gb|EAO55126.1| GTP pyrophosphokinase  / Guanosine-3',5'-bis(Diphosphate)
           3'-pyrophosphohydrolase [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
          Length = 727

 Score =  345 bits (885), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 201/496 (40%), Positives = 289/496 (58%), Gaps = 50/496 (10%)

Query: 134 LRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIA 193
           L     YL+  ++ELV RA   A +AH  Q R+SGEP+IIHP++VA IL +L +D  +++
Sbjct: 13  LEKASQYLADEDIELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDPATVS 72

Query: 194 AGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDL 253
           AG LHD VEDT + T E IE EF   +  +V+G   V+KLGK+K K+  H  Q  +A++ 
Sbjct: 73  AGFLHDVVEDTEI-TLEDIEREFNKEIAMLVDG---VTKLGKIKYKS--HEQQ--QAENH 124

Query: 254 RQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIK 313
           R+MF+AM +++RVI++KLADRLHNMRTL H+P  KQ  IA ETL++FAPLA  LG+  IK
Sbjct: 125 RKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGISTIK 184

Query: 314 SELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEI 373
            ELE+ S  Y N + Y     R+ +L K    E EE    +M  I +   L  + ++ EI
Sbjct: 185 WELEDTSLRYLNPQQYY----RIVNLMKRKRAEREEYLDEVMTGIREK--LKEVAIQPEI 238

Query: 374 RSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVH 433
               K  YSIY+ +       NE+  +  +R+++            +  + CY VLG++H
Sbjct: 239 SGRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVV------------NSIKDCYAVLGIIH 286

Query: 434 GIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAH 493
             W P+P   KDYIA PK N YQSLH+T+I    +    LEVQIRT+EM  IAE GIAAH
Sbjct: 287 TCWKPMPGRFKDYIAMPKANLYQSLHSTVIGPKGDP---LEVQIRTKEMHEIAEFGIAAH 343

Query: 494 YSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFV 553
           ++ +                  GKT       +   ++W   I EWQ E      + EF+
Sbjct: 344 WAYK-----------------EGKT-AETTGTLEKELTWFRQILEWQNE---ASNAEEFM 382

Query: 554 DTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHV 613
           +++  DL    VFVFTP+G++  LP G+  +D+AY +H+EIGN  + AKVNG +V+  + 
Sbjct: 383 ESLKIDLFSDMVFVFTPKGDVMELPLGSVPIDFAYRVHSEIGNNTIGAKVNGKMVTLDYK 442

Query: 614 LANAEVVEIITYNVSF 629
           L   +++EI+T   S+
Sbjct: 443 LKTGDIIEILTSKHSY 458


>gi|266623547|ref|ZP_06116482.1| GTP diphosphokinase [Clostridium hathewayi DSM 13479]
 gi|288864647|gb|EFC96945.1| GTP diphosphokinase [Clostridium hathewayi DSM 13479]
          Length = 779

 Score =  345 bits (885), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 201/509 (39%), Positives = 304/509 (59%), Gaps = 65/509 (12%)

Query: 126 SPERLWEDLRPTISYLSP-NELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
           SPE L+++L  +I    P +++ ++ +A  +A   H  QKR+SGEP+IIHP+ VA IL +
Sbjct: 42  SPEVLYQELIASIRRYHPSDDISMIEKAYHVADNFHKEQKRKSGEPYIIHPLCVAIILAD 101

Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
           LE+D E+IAAG+LHD VEDT V+T + + +EFG  V  +V+G TK+++L     K E   
Sbjct: 102 LEMDKETIAAGILHDVVEDT-VMTLDELGKEFGEEVALLVDGVTKLTQLSWSMDKME--- 157

Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
              ++A++LR+MFLAM +++RVII+KLADRLHNMRTL +M P KQ   A ET++++AP+A
Sbjct: 158 ---LQAENLRKMFLAMAKDIRVIIIKLADRLHNMRTLQYMKPEKQKEKARETMEIYAPIA 214

Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDD--Q 362
             LG+ +IK EL++LS  Y   + Y  +  +++ L K       +A +  +K I D+  +
Sbjct: 215 HRLGISKIKIELDDLSLKYLQPDVYYDLAEKIS-LKK-------DARESFVKSIVDEVQE 266

Query: 363 FLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQ 422
            L   ++  ++    K  +SIYK ++    +++++  +  +RII+               
Sbjct: 267 HLKEASIVAKVDGRVKHFFSIYKKMVNQNKTLDQIYDLFAVRIIV------------DSV 314

Query: 423 QICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQI 477
           + CY  LG++H ++ PIP   KDYIA PKPN YQSLHTTLI     PF        E+QI
Sbjct: 315 KDCYAALGVIHELYKPIPGRFKDYIAMPKPNMYQSLHTTLIGSNGQPF--------EIQI 366

Query: 478 RTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIR 537
           RT EM   AE GIAAH+  +   +G V   +                    ++SWL  I 
Sbjct: 367 RTYEMHRTAEYGIAAHWKYKESGSGQVAAGKEEE-----------------KLSWLRQIL 409

Query: 538 EWQEEFVGNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIG 595
           EWQ++   N   +EF++ +    DL    V+ FTP G++KNLP G+T +D+AY IH+ +G
Sbjct: 410 EWQKDMSDN---KEFLNMVKGDLDLFSDSVYCFTPSGDVKNLPSGSTPIDFAYSIHSAVG 466

Query: 596 NKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
           NKMV A+VNG LV+  +V+ N + VE+IT
Sbjct: 467 NKMVGARVNGKLVNIDYVIQNGDQVEVIT 495


>gi|393200222|ref|YP_006462064.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
           [Solibacillus silvestris StLB046]
 gi|406667432|ref|ZP_11075190.1| GTP pyrophosphokinase [Bacillus isronensis B3W22]
 gi|327439553|dbj|BAK15918.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
           [Solibacillus silvestris StLB046]
 gi|405384800|gb|EKB44241.1| GTP pyrophosphokinase [Bacillus isronensis B3W22]
          Length = 731

 Score =  345 bits (885), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 201/504 (39%), Positives = 299/504 (59%), Gaps = 52/504 (10%)

Query: 126 SPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGEL 185
           +PE ++E ++   SY++   +  V +A  +A EAH  Q R SGEP+IIHPV+VA IL EL
Sbjct: 8   APEDVFELVK---SYMNEEHVTFVVKAYEVAKEAHKEQFRSSGEPYIIHPVQVAGILAEL 64

Query: 186 ELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSV 245
           ++D E++AAG LHD VEDT V T E +  EF   V ++V+G   V+KLGK+K      S 
Sbjct: 65  QMDPETVAAGFLHDVVEDTEV-TREDLVNEFSEEVAKLVDG---VTKLGKIKY----MSK 116

Query: 246 QDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAK 305
           ++ +A++ R+MF+AM +++RVI++KLADRLHNMRTL H+P  KQ  I+ ETL++FAPLA 
Sbjct: 117 EEQQAENHRKMFVAMAQDIRVILIKLADRLHNMRTLKHLPAEKQRRISQETLEIFAPLAH 176

Query: 306 LLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLD 365
            LG+ ++K ELE+ +  Y N + Y     R+  L K+   E E     +M +I     L 
Sbjct: 177 RLGISKVKWELEDTALRYLNPQQYY----RIVSLMKKKRDEREAYLDNVMDEINSQ--LK 230

Query: 366 LMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQIC 425
            + ++ +I    K  YSIY+ ++  +   NE+  +  +RI            L    + C
Sbjct: 231 EVEIEADIFGRPKHLYSIYRKMVLQKKQFNEIYDLLAVRI------------LVDSIKDC 278

Query: 426 YHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLI 485
           Y V+G++H +W P+P   KDYIA PK N YQSLHTT+I    +    LEVQIRT+EM  I
Sbjct: 279 YAVIGIIHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVIGPYGDP---LEVQIRTKEMHKI 335

Query: 486 AERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVG 545
           AE GIAAH++ +                  GKTV  N   I  +++W   I E+Q E   
Sbjct: 336 AEFGIAAHWAYK-----------------EGKTVEQNAETIDQKLTWFREILEFQNE--- 375

Query: 546 NMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNG 605
           +  + EF++++  DL    V+VF+P+G++  LP G+  +D+AY +H+E+GNK + AKVNG
Sbjct: 376 SSNAAEFMESLKFDLFSDMVYVFSPKGDVIELPSGSVPIDFAYRVHSEVGNKTIGAKVNG 435

Query: 606 NLVSPTHVLANAEVVEIITYNVSF 629
            +V     L   ++VE++T   SF
Sbjct: 436 KMVPLDTPLKTGDIVEVLTSKQSF 459


>gi|187932883|ref|YP_001885230.1| GTP pyrophosphokinase [Clostridium botulinum B str. Eklund 17B]
 gi|187721036|gb|ACD22257.1| RelA/SpoT family protein [Clostridium botulinum B str. Eklund 17B]
          Length = 728

 Score =  345 bits (884), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 200/480 (41%), Positives = 284/480 (59%), Gaps = 48/480 (10%)

Query: 145 ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDT 204
           ++E++++A   A +AH  QKR SGEP+IIHP++VA IL EL +D  +IAAGLLHD +EDT
Sbjct: 17  DVEMIKKAYFFAEDAHKEQKRESGEPYIIHPIDVAEILAELGMDTSTIAAGLLHDVIEDT 76

Query: 205 NVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEV 264
              ++E ++  F   +  +V G   V+KLGK++ K +    ++ +AD++R+M LAM +++
Sbjct: 77  -TCSYESMKTIFNEEIANLVNG---VTKLGKIQYKTK----EEQQADNVRKMLLAMAKDI 128

Query: 265 RVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYT 324
           RVII+KLADRLHNMRTL  MP  KQ   A ETL ++APLA  LGM +IK ELE+LSF Y 
Sbjct: 129 RVIIIKLADRLHNMRTLKFMPKGKQKLKAKETLDIYAPLAHRLGMSKIKWELEDLSFRYL 188

Query: 325 NAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIY 384
           + ++Y K+  ++A+   E E  + E    L +K      LD   + ++I    K  YSIY
Sbjct: 189 HEDEYYKLVEQIAEKRVERETYINEVVCYLKEK------LDESGIDSDIEGRPKHFYSIY 242

Query: 385 KAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMK 444
           K ++    SI ++  +  +RI            L +  + CY VLG+VH I+ PIP   K
Sbjct: 243 KKMINKNKSIEQIFDLTAIRI------------LVNSVKDCYGVLGIVHTIYKPIPGRFK 290

Query: 445 DYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLV 504
           DYIA PKPN YQSLHTT+I    ++    E+QIRT EM   AE GIAAH+          
Sbjct: 291 DYIAMPKPNMYQSLHTTVIGNQGKT---FEIQIRTFEMHKTAEYGIAAHWK--------- 338

Query: 505 GHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSR 564
              +   ++   K       +   ++ WL  + EWQ+E      + EF++    DL    
Sbjct: 339 --YKEGDKNEEDKV-----KDFEKKLVWLRDMLEWQKE---TSDAEEFIEGFKIDLFSDE 388

Query: 565 VFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
           VFVFTP+G + NL   AT +D+AY IHT+IGNK V AKVNG +V   + L   E+VEI+T
Sbjct: 389 VFVFTPKGVVINLCAKATPIDFAYRIHTDIGNKCVGAKVNGRIVPLDYTLKTGEIVEILT 448


>gi|331083062|ref|ZP_08332179.1| hypothetical protein HMPREF0992_01103 [Lachnospiraceae bacterium
           6_1_63FAA]
 gi|330405064|gb|EGG84601.1| hypothetical protein HMPREF0992_01103 [Lachnospiraceae bacterium
           6_1_63FAA]
          Length = 769

 Score =  345 bits (884), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 210/518 (40%), Positives = 298/518 (57%), Gaps = 81/518 (15%)

Query: 126 SPERLWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
           SPE L+++L  ++    P+ ++ ++ +A  +A  AH GQ R+SGEP+IIHP+ VA IL +
Sbjct: 32  SPEVLYQELITSVRKYHPSTDISMIDKAFQIANNAHKGQVRKSGEPYIIHPLCVAIILAD 91

Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
           LELD E+I AGLLHD VEDT V+T E I EEF A V  +V+G   V+KLG+L   N +  
Sbjct: 92  LELDKETIVAGLLHDVVEDT-VMTSEEIREEFNAEVELLVDG---VTKLGQL---NYSAD 144

Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
             +V+A++LR+MFLAM +++RVI++KLADRLHNMRTL +MPPHKQ   A ET+ ++AP+A
Sbjct: 145 KVEVQAENLRKMFLAMAKDIRVILIKLADRLHNMRTLKYMPPHKQKEKARETMDIYAPIA 204

Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
           + LG+ ++K EL++LS  Y   E Y  +                   KI +KK E   F+
Sbjct: 205 QRLGISKVKIELDDLSLKYLKPEVYYDL-----------------VEKINLKKSERQAFI 247

Query: 365 DLM-----------TVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCS 413
           D +           ++  +I    K  +SIYK ++    +I+++  +  +RII+      
Sbjct: 248 DQIVGDVRAHIEKASINAQIDGRIKHFFSIYKKMVNQDKTIDQIYDLFAVRIIV------ 301

Query: 414 GVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYE 468
                    + CY  LG++H ++ PIP   KDYIA PKPN YQSLHTTLI     PF   
Sbjct: 302 ------DTVRDCYAALGIIHEMYKPIPGRFKDYIAMPKPNMYQSLHTTLIGPSGQPF--- 352

Query: 469 SMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIAL 528
                E+QIRT EM   AE GIAAH+  +               S  GK     +     
Sbjct: 353 -----EIQIRTFEMHRTAEYGIAAHWKYKEV-------------SNNGKVSVTQSEE--E 392

Query: 529 RISWLNAIREWQEEFVGNMTSREF--VDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDY 586
           ++SWL  I EWQ +   N   +EF  +     DL    V+ FTP G++K LP G+T +D+
Sbjct: 393 KMSWLRQILEWQRDMSDN---KEFLSLLKSDLDLFSESVYCFTPAGDVKTLPNGSTPIDF 449

Query: 587 AYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
           AY +H+ +GNKMV A+VNG LV   +V+ N + VEIIT
Sbjct: 450 AYNVHSAVGNKMVGARVNGKLVPIEYVIKNGDRVEIIT 487


>gi|237742590|ref|ZP_04573071.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
           [Fusobacterium sp. 4_1_13]
 gi|294784891|ref|ZP_06750179.1| GTP diphosphokinase [Fusobacterium sp. 3_1_27]
 gi|229430238|gb|EEO40450.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
           [Fusobacterium sp. 4_1_13]
 gi|294486605|gb|EFG33967.1| GTP diphosphokinase [Fusobacterium sp. 3_1_27]
          Length = 724

 Score =  345 bits (884), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 194/498 (38%), Positives = 299/498 (60%), Gaps = 62/498 (12%)

Query: 131 WEDLRPTISYLSPNELEL----VRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELE 186
           WE L   +     N L L    ++ AL  A E+H GQ R+SG+ +I+HPVEVA+IL +++
Sbjct: 4   WEQL---LDKAKANHLNLDFDKIKLALGFAEESHQGQYRKSGDDYIVHPVEVAKILMDMK 60

Query: 187 LDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQ 246
           +D ++I AGLLHD VEDT ++    I+  FG TV  +V+G TK+  L     KN+     
Sbjct: 61  MDTDTIVAGLLHDVVEDT-LIPIADIKYNFGDTVATLVDGVTKLKALPN-GTKNQ----- 113

Query: 247 DVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKL 306
              A+++R+M LAM E +RVI++KLADRLHNMRTL  M P KQ SI+ ETL ++APLA  
Sbjct: 114 ---AENIRKMILAMAENIRVILIKLADRLHNMRTLKFMKPEKQQSISKETLDIYAPLAHR 170

Query: 307 LGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDL 366
           LGM ++KSELE+L+F Y + +++ ++K+ V +  +E +  +E   + +++ + +      
Sbjct: 171 LGMAKVKSELEDLAFSYLHHDEFLEIKKLVDNTKEERKDYIENFIRTMIRTLSE------ 224

Query: 367 MTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICY 426
           + +K E++   K  YSIYK + +     +++  +  +R+I+  K              CY
Sbjct: 225 LGIKAEVKGRFKHFYSIYKKMYQKGKEFDDIYDLMGVRVIVDDKAT------------CY 272

Query: 427 HVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIA 486
           HVLG+VH  +TP+P   KDYIA PK N YQS+HTT++  L +    +E+QIRT++MD IA
Sbjct: 273 HVLGIVHSQYTPVPGRFKDYIAVPKSNNYQSIHTTIVGPLGKF---IEIQIRTKDMDEIA 329

Query: 487 ERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGN 546
           E GIAAH++            + N +S +   +            WL  I E+Q E   +
Sbjct: 330 EEGIAAHWN-----------YKENKKSSKDDNIY----------GWLRHIIEFQNE---S 365

Query: 547 MTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGN 606
            ++ +F++ +T D+    VF F+P+G+I  LP GAT +D+A+M+HT++G K V AKVNG 
Sbjct: 366 DSTEDFIEGVTGDIDRGTVFTFSPKGDIIELPVGATALDFAFMVHTQVGCKCVGAKVNGR 425

Query: 607 LVSPTHVLANAEVVEIIT 624
           +V+  H L + + VEIIT
Sbjct: 426 MVTIDHKLKSGDKVEIIT 443


>gi|237743935|ref|ZP_04574416.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
           [Fusobacterium sp. 7_1]
 gi|289765417|ref|ZP_06524795.1| hypothetical protein PSAG_01019 [Fusobacterium sp. D11]
 gi|336419052|ref|ZP_08599319.1| GTP diphosphokinase [Fusobacterium sp. 11_3_2]
 gi|423138132|ref|ZP_17125775.1| RelA/SpoT family protein [Fusobacterium nucleatum subsp. animalis
           F0419]
 gi|229432966|gb|EEO43178.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
           [Fusobacterium sp. 7_1]
 gi|289716972|gb|EFD80984.1| hypothetical protein PSAG_01019 [Fusobacterium sp. D11]
 gi|336164057|gb|EGN66969.1| GTP diphosphokinase [Fusobacterium sp. 11_3_2]
 gi|371958694|gb|EHO76403.1| RelA/SpoT family protein [Fusobacterium nucleatum subsp. animalis
           F0419]
          Length = 724

 Score =  345 bits (884), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 193/498 (38%), Positives = 301/498 (60%), Gaps = 62/498 (12%)

Query: 131 WEDLRPTISYLSPNELEL----VRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELE 186
           WE L   +     N L L    ++ AL  A E+H GQ R+SG+ +I+HPVEVA+IL +++
Sbjct: 4   WEQL---LDKAKANHLNLDFDKIKLALGFAEESHQGQYRKSGDDYIVHPVEVAKILMDMK 60

Query: 187 LDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQ 246
           +D ++I AGLLHD VEDT ++    I+  FG TV  +V+G   V+KL  L    +N    
Sbjct: 61  MDTDTIVAGLLHDVVEDT-LIPIADIKYNFGDTVATLVDG---VTKLKALPNGTKN---- 112

Query: 247 DVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKL 306
             +A+++R+M LAM E +RVI++KLADRLHNMRTL  M P KQ SI+ ETL ++APLA  
Sbjct: 113 --QAENIRKMILAMAENIRVILIKLADRLHNMRTLKFMKPEKQQSISKETLDIYAPLAHR 170

Query: 307 LGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDL 366
           LGM ++KSELE+++F Y + +++ ++KR V +  +E +  +E   + +++ + +      
Sbjct: 171 LGMAKVKSELEDIAFSYLHHDEFLEIKRLVDNTKEERKDYIENFIRTMIRTLSE------ 224

Query: 367 MTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICY 426
           + +K E++   K  YSIY+ + +     +++  +  +R+I++ K              CY
Sbjct: 225 LGIKAEVKGRFKHFYSIYRKMYQKGKDFDDIYDLMGVRVIVEDKAT------------CY 272

Query: 427 HVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIA 486
           HVLG+VH  +TP+P   KDYIA PK N YQS+HTT++  L +    +E+QIRT++MD IA
Sbjct: 273 HVLGIVHSQYTPVPGRFKDYIAVPKSNNYQSIHTTIVGPLGKF---IEIQIRTKDMDDIA 329

Query: 487 ERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGN 546
           E GIAAH++            + N +S +   +            WL  I E+Q E   +
Sbjct: 330 EEGIAAHWN-----------YKENKKSSKDDNIY----------GWLRHIIEFQNE---S 365

Query: 547 MTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGN 606
            ++ +F++ +T D+    VF F+P+G+I  LP GAT +D+A+M+HT++G K V AKVNG 
Sbjct: 366 DSTEDFIEGVTGDIDRGTVFTFSPKGDIIELPVGATALDFAFMVHTQVGCKCVGAKVNGR 425

Query: 607 LVSPTHVLANAEVVEIIT 624
           +V+  H L + + VEIIT
Sbjct: 426 MVTIDHKLKSGDKVEIIT 443


>gi|260589630|ref|ZP_05855543.1| GTP diphosphokinase [Blautia hansenii DSM 20583]
 gi|260539870|gb|EEX20439.1| GTP diphosphokinase [Blautia hansenii DSM 20583]
          Length = 769

 Score =  345 bits (884), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 210/518 (40%), Positives = 298/518 (57%), Gaps = 81/518 (15%)

Query: 126 SPERLWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
           SPE L+++L  ++    P+ ++ ++ +A  +A  AH GQ R+SGEP+IIHP+ VA IL +
Sbjct: 32  SPEVLYQELITSVRKYHPSTDISMIDKAFQIANNAHKGQVRKSGEPYIIHPLCVAIILAD 91

Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
           LELD E+I AGLLHD VEDT V+T E I EEF A V  +V+G   V+KLG+L   N +  
Sbjct: 92  LELDKETIVAGLLHDVVEDT-VMTSEEIREEFNAEVELLVDG---VTKLGQL---NYSAD 144

Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
             +V+A++LR+MFLAM +++RVI++KLADRLHNMRTL +MPPHKQ   A ET+ ++AP+A
Sbjct: 145 KVEVQAENLRKMFLAMAKDIRVILIKLADRLHNMRTLKYMPPHKQKEKARETMDIYAPIA 204

Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
           + LG+ ++K EL++LS  Y   E Y  +                   KI +KK E   F+
Sbjct: 205 QRLGISKVKIELDDLSLKYLKPEVYYDL-----------------VEKINLKKSERQAFI 247

Query: 365 DLM-----------TVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCS 413
           D +           ++  +I    K  +SIYK ++    +I+++  +  +RII+      
Sbjct: 248 DQIVGDVRAHIEKASINAQIDGRIKHFFSIYKKMVNQDKTIDQIYDLFAVRIIV------ 301

Query: 414 GVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYE 468
                    + CY  LG++H ++ PIP   KDYIA PKPN YQSLHTTLI     PF   
Sbjct: 302 ------DTVRDCYAALGIIHEMYKPIPGRFKDYIAMPKPNMYQSLHTTLIGPSGQPF--- 352

Query: 469 SMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIAL 528
                E+QIRT EM   AE GIAAH+  +               S  GK     +     
Sbjct: 353 -----EIQIRTFEMHRTAEYGIAAHWKYKEV-------------SNNGKVSVTQSEE--E 392

Query: 529 RISWLNAIREWQEEFVGNMTSREF--VDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDY 586
           ++SWL  I EWQ +   N   +EF  +     DL    V+ FTP G++K LP G+T +D+
Sbjct: 393 KMSWLRQILEWQRDMSDN---KEFLSLLKSDLDLFSESVYCFTPAGDVKTLPNGSTPIDF 449

Query: 587 AYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
           AY +H+ +GNKMV A+VNG LV   +V+ N + VEIIT
Sbjct: 450 AYNVHSAVGNKMVGARVNGKLVPIEYVIKNGDRVEIIT 487


>gi|333897247|ref|YP_004471121.1| (p)ppGpp synthetase I SpoT/RelA [Thermoanaerobacterium
           xylanolyticum LX-11]
 gi|333112512|gb|AEF17449.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacterium
           xylanolyticum LX-11]
          Length = 718

 Score =  345 bits (884), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 194/488 (39%), Positives = 298/488 (61%), Gaps = 62/488 (12%)

Query: 142 SPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTV 201
           S +++ L+ +A   A +AH+GQ R SGEP+I+HPVEVA IL +LELD  +IA+GLLHD +
Sbjct: 15  SEDDINLILKAYDYALKAHEGQYRNSGEPYIVHPVEVAMILADLELDVSTIASGLLHDVI 74

Query: 202 EDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMT 261
           EDT++ ++E I+ EFG  +  +V+G   V+KLG ++ K    S  + +A+++R+M +AM 
Sbjct: 75  EDTSI-SYEDIKNEFGQEIADLVDG---VTKLGMIEYK----SKVEQQAENMRKMLIAMA 126

Query: 262 EEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSF 321
           +++RVI++KLADRLHNMRTL  +   KQ   A ETL+++AP+A  LGM  IK ELE+LS 
Sbjct: 127 KDIRVIMIKLADRLHNMRTLKFLSEEKQKEKAQETLEIYAPIAHRLGMSMIKWELEDLSL 186

Query: 322 MYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPY 381
            Y + ++Y  +  +VA   KE E+ ++E    L++K+++   L+ + +K ++    K  Y
Sbjct: 187 RYLHPDEYYSLVEKVAKKRKEREESIKE----LIEKLKEK--LNEIGIKADVDGRPKHFY 240

Query: 382 SIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPR 441
           SIYK + +   +  ++  +  +R+I+            +  + CY  LG+VH +W P+P 
Sbjct: 241 SIYKKMKQQNKTFEQIYDLMAVRVIV------------NTVKDCYGTLGVVHTLWKPMPG 288

Query: 442 AMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
             KDYIA PKPN YQSLHTT+I     PF        E+QIRT +M   AE GIAAH+  
Sbjct: 289 RFKDYIAMPKPNMYQSLHTTVIGPKGEPF--------EIQIRTWDMHRTAEYGIAAHW-- 338

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
                          +   GK+          ++SWL  + EWQ E      ++EF++T+
Sbjct: 339 ---------------KYKEGKSY---EDEFDAKLSWLRQLLEWQREL---KDAKEFMETL 377

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             DL    V+VFTP+G++ +LP G+T +D+AY IHTEIG+++  AKVNG +V   + L N
Sbjct: 378 KIDLFTDEVYVFTPKGDVISLPAGSTPIDFAYSIHTEIGHRLNGAKVNGKIVPIDYELKN 437

Query: 617 AEVVEIIT 624
            ++VEI+T
Sbjct: 438 GDIVEILT 445


>gi|407796127|ref|ZP_11143083.1| GTP pyrophosphokinase [Salimicrobium sp. MJ3]
 gi|407019481|gb|EKE32197.1| GTP pyrophosphokinase [Salimicrobium sp. MJ3]
          Length = 733

 Score =  345 bits (884), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 204/490 (41%), Positives = 289/490 (58%), Gaps = 50/490 (10%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           YL+ ++L+ +R+A   A  AH  Q R+SGEP+IIHPV+VA IL  LELD E+IA+G LHD
Sbjct: 19  YLNEDDLQFIRKAHEYAAWAHRDQYRKSGEPYIIHPVQVAGILVNLELDAETIASGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
           TVEDT V T E ++  F   V  +V+G   V+KLGK+K K    S ++ +A++ R+MF+A
Sbjct: 79  TVEDTGV-TVEDLKVTFNEEVAMLVDG---VTKLGKIKYK----SKEEQQAENHRKMFVA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M +++RVI++KLADRLHNMRTL H+P  KQ  I+ ETL++FAPLA  LG+  IK ELE+ 
Sbjct: 131 MAKDLRVILIKLADRLHNMRTLKHLPAEKQRRISNETLEIFAPLAHRLGISTIKWELEDT 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           +  Y N + Y     R+  L K+   E E     ++ +I  +  LD + ++ ++    K 
Sbjct: 191 ALRYLNPQQYY----RIVHLMKQKRNEREHYVDEVINQIRGE--LDNVNIEADLDGRPKH 244

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIYK ++      NE+  +  +RI            L +  + CY VLG++H  W P+
Sbjct: 245 LYSIYKKMVLQSKQFNEIYDLLAVRI------------LVNSIKDCYAVLGIIHTCWKPM 292

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PKPN YQSLHTT+I    +    LEVQIRT +M  IAE GIAAH+     
Sbjct: 293 PGRFKDYIAMPKPNLYQSLHTTVIGPKGDP---LEVQIRTHDMHEIAEYGIAAHW----- 344

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
                  A   G+   G T          ++SW   I EWQ E      + EF++++  D
Sbjct: 345 -------AYKEGKQS-GSTQSFEE-----KLSWFREIMEWQSE---THDAEEFMESLKMD 388

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           L    V+VFTPRG++  LP G+  +D+AY IHTEIGN+ + AKVN  +    +VL   ++
Sbjct: 389 LFSDMVYVFTPRGDVIELPYGSNPLDFAYRIHTEIGNQTIGAKVNSKMEPLDYVLKTGDI 448

Query: 620 VEIITYNVSF 629
           VE++T   S+
Sbjct: 449 VEVMTSKHSY 458


>gi|336400155|ref|ZP_08580943.1| hypothetical protein HMPREF0404_00234 [Fusobacterium sp. 21_1A]
 gi|336163352|gb|EGN66284.1| hypothetical protein HMPREF0404_00234 [Fusobacterium sp. 21_1A]
          Length = 574

 Score =  345 bits (884), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 193/498 (38%), Positives = 301/498 (60%), Gaps = 62/498 (12%)

Query: 131 WEDLRPTISYLSPNELEL----VRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELE 186
           WE L   +     N L L    ++ AL  A E+H GQ R+SG+ +I+HPVEVA+IL +++
Sbjct: 4   WEQL---LDKAKANHLNLDFDKIKLALGFAEESHQGQYRKSGDDYIVHPVEVAKILMDMK 60

Query: 187 LDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQ 246
           +D ++I AGLLHD VEDT ++    I+  FG TV  +V+G   V+KL  L    +N    
Sbjct: 61  MDTDTIVAGLLHDVVEDT-LIPIADIKYNFGDTVATLVDG---VTKLKALPNGTKN---- 112

Query: 247 DVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKL 306
             +A+++R+M LAM E +RVI++KLADRLHNMRTL  M P KQ SI+ ETL ++APLA  
Sbjct: 113 --QAENIRKMILAMAENIRVILIKLADRLHNMRTLKFMKPEKQQSISKETLDIYAPLAHR 170

Query: 307 LGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDL 366
           LGM ++KSELE+++F Y + +++ ++KR V +  +E +  +E   + +++ + +      
Sbjct: 171 LGMAKVKSELEDIAFSYLHHDEFLEIKRLVDNTKEERKDYIENFIRTMIRTLSE------ 224

Query: 367 MTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICY 426
           + +K E++   K  YSIY+ + +     +++  +  +R+I++ K              CY
Sbjct: 225 LGIKAEVKGRFKHFYSIYRKMYQKGKEFDDIYDLMGVRVIVEDKAT------------CY 272

Query: 427 HVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIA 486
           HVLG+VH  +TP+P   KDYIA PK N YQS+HTT++  L +    +E+QIRT++MD IA
Sbjct: 273 HVLGIVHSQYTPVPGRFKDYIAVPKSNNYQSIHTTIVGPLGKF---IEIQIRTKDMDDIA 329

Query: 487 ERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGN 546
           E GIAAH++            + N +S +   +            WL  I E+Q E   +
Sbjct: 330 EEGIAAHWN-----------YKENKKSSKDDNIY----------GWLRHIIEFQNE---S 365

Query: 547 MTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGN 606
            ++ +F++ +T D+    VF F+P+G+I  LP GAT +D+A+M+HT++G K V AKVNG 
Sbjct: 366 DSTEDFIEGVTGDIDRGTVFTFSPKGDIIELPVGATALDFAFMVHTQVGCKCVGAKVNGR 425

Query: 607 LVSPTHVLANAEVVEIIT 624
           +V+  H L + + VEIIT
Sbjct: 426 MVTIDHKLKSGDKVEIIT 443


>gi|225548080|ref|ZP_03769365.1| hypothetical protein RUMHYD_00059 [Blautia hydrogenotrophica DSM
           10507]
 gi|225040756|gb|EEG51002.1| RelA/SpoT family protein [Blautia hydrogenotrophica DSM 10507]
          Length = 769

 Score =  345 bits (884), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 199/507 (39%), Positives = 298/507 (58%), Gaps = 60/507 (11%)

Query: 126 SPERLWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
           SPE L+E+L   +    P+ +L ++ +A  +A  AH+GQ R+SGEP+IIHP+ VA IL +
Sbjct: 31  SPEVLYEELLACVRKYHPSADLSMIEKAYRIAKNAHEGQFRKSGEPYIIHPLCVAIILAD 90

Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
           LELD E+I AGLLHD VEDT ++T E I++EFGA V  +V+G   V+KLG+L    +   
Sbjct: 91  LELDKETIVAGLLHDAVEDT-IMTTEEIQQEFGAEVALLVDG---VTKLGQLSYSADKVE 146

Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
           +Q   A++LR+MFLAM +++RVI++KLADRLHNMRTL +M P KQ   A ET+ ++AP+A
Sbjct: 147 LQ---AENLRKMFLAMAKDIRVILIKLADRLHNMRTLQYMKPEKQQEKARETMDIYAPIA 203

Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
             LG+ ++K EL++L+  Y   + Y  +  ++     E E  + +    + + +ED    
Sbjct: 204 MRLGISKVKVELDDLALKYLKPDVYYDLVEKINLKKSEREDYVNQVVGQVKRHMED---- 259

Query: 365 DLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
               +K ++    K  +SIY+ ++    +I+++  +  +RI            L    + 
Sbjct: 260 --AGIKAQVDGRIKHFFSIYRKMVNQDKTIDQIYDLFAVRI------------LVDTVKD 305

Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRT 479
           CY  LG++H ++ PIP   KDYIA PKPN YQSLHTTLI     PF        E+QIRT
Sbjct: 306 CYAALGVIHEMYKPIPGRFKDYIAMPKPNMYQSLHTTLIGPKGQPF--------EIQIRT 357

Query: 480 EEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREW 539
            EM   AE GIAAH+  +            +G+ P G            +++WL  I EW
Sbjct: 358 FEMHKTAEYGIAAHWKYK---------ESSDGKKPIG-------IREEEKLNWLRQILEW 401

Query: 540 QEEFVGNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNK 597
           Q++   N   +EF+  +    DL    V+ FTP+G++K LP G+T +D+AY +H+ +GN 
Sbjct: 402 QKDMSDN---KEFLSLLKNDLDLFADNVYCFTPQGDVKTLPNGSTPIDFAYSVHSAVGNN 458

Query: 598 MVAAKVNGNLVSPTHVLANAEVVEIIT 624
           MV A+VNG LV   +V+ N + +EIIT
Sbjct: 459 MVGARVNGKLVPIEYVINNGDRIEIIT 485


>gi|294783445|ref|ZP_06748769.1| GTP diphosphokinase [Fusobacterium sp. 1_1_41FAA]
 gi|294480323|gb|EFG28100.1| GTP diphosphokinase [Fusobacterium sp. 1_1_41FAA]
          Length = 725

 Score =  345 bits (884), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 189/480 (39%), Positives = 294/480 (61%), Gaps = 55/480 (11%)

Query: 145 ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDT 204
           + + ++ AL  A E+H GQ R+SG+ +IIHPVEVA+IL ++++D +++ AGLLHD VEDT
Sbjct: 20  DFDKLKLALAFAEESHQGQYRKSGDDYIIHPVEVAKILMDMKMDTDTVVAGLLHDVVEDT 79

Query: 205 NVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEV 264
            ++    I+  FG TV  +V+G TK+  L     KN+        A+++R+M LAM E +
Sbjct: 80  -LIPIADIKYNFGDTVAVLVDGVTKLKALPN-GTKNQ--------AENIRKMILAMAENI 129

Query: 265 RVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYT 324
           RVI++KLADRLHNMRTL  M P KQ +I+ ETL ++APLA  LGM +IKSELE+LSF Y 
Sbjct: 130 RVILIKLADRLHNMRTLKFMKPEKQQAISKETLDIYAPLAHRLGMAKIKSELEDLSFSYL 189

Query: 325 NAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIY 384
           + E+Y ++KR V +  +E +  ++   + + + + D      + +K E++   K  YSIY
Sbjct: 190 HHEEYLEIKRLVENTKEERKDYIDNFIRTMKRTLVD------LGLKAEVKGRFKHFYSIY 243

Query: 385 KAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMK 444
           K + +     +++  +  +R+I++ K              CYH+LG+VH  +TP+P   K
Sbjct: 244 KKMYQKGKEFDDIYDLMGVRVIVEDKAA------------CYHILGIVHSQYTPVPGRFK 291

Query: 445 DYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLV 504
           DYIA PK N YQS+HTT++  L +    +E+QIRT++MD IAE GIAAH++         
Sbjct: 292 DYIAVPKSNNYQSIHTTIVGPLGKF---IEIQIRTKDMDDIAEEGIAAHWN--------- 339

Query: 505 GHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSR 564
              + N ++ +   +            WL  I E+Q E   + ++ +F++ +T D+    
Sbjct: 340 --YKENKKTSKDDNIY----------GWLRHIIEFQNE---SDSTEDFIEGVTGDIDRGT 384

Query: 565 VFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
           +F F+P+G+I  LP GAT +D+A+M+HT++G K V AKVNG +V+  H L + + VEIIT
Sbjct: 385 IFTFSPKGDIIELPVGATALDFAFMVHTQVGCKCVGAKVNGRMVTIDHKLRSGDKVEIIT 444


>gi|452975303|gb|EME75122.1| GTP pyrophosphokinase RelA [Bacillus sonorensis L12]
          Length = 733

 Score =  345 bits (884), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 197/491 (40%), Positives = 293/491 (59%), Gaps = 50/491 (10%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           +YLS   +  +++A   A +AH  Q R+SGEP+IIHP++VA IL +LE+D  +IA G LH
Sbjct: 18  AYLSDEHVAFIKKAYQYAEDAHREQYRKSGEPYIIHPIQVAGILVDLEMDPATIAGGFLH 77

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT+V T E ++E F   V  +V+G   V+KLGK+K K    S ++ +A++ R+MF+
Sbjct: 78  DVVEDTSV-TLEDLKEAFNEEVAMLVDG---VTKLGKIKYK----SQEEQQAENHRKMFV 129

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM +++RVI++KLADRLHNMRTL H+P  KQ  I+ ETL++FAPLA  LG+ +IK ELE+
Sbjct: 130 AMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRISNETLEIFAPLAHRLGISKIKWELED 189

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
            +  Y N + Y ++   +     E E  ++E    +  ++E+      + +K +     K
Sbjct: 190 TALRYLNPQQYYRIVNLMKKKRAERELYVQEVVNEVKNRVEE------VNIKADFSGRPK 243

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIY+ +       NE+  +  +RI            L +  + CY VLG++H  W P
Sbjct: 244 HIYSIYRKMAMQNKQFNEIYDLLAVRI------------LVNSIKDCYAVLGIIHTCWKP 291

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PKPN YQSLHTT+I    +    LEVQIRT EM  IAE GIAAH++ + 
Sbjct: 292 MPGRFKDYIAMPKPNMYQSLHTTVIGPKGDP---LEVQIRTFEMHEIAEYGIAAHWAYK- 347

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                            GK+V   +A+   ++SW   I E+Q E   +  + EF++++  
Sbjct: 348 ----------------EGKSVN-EDASFEKKLSWFREILEFQNE---SSDAEEFMESLKI 387

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           DL    VFVFTP+G++  LP G+  +D++Y IH+EIGNK + AKVNG +V+  + L   +
Sbjct: 388 DLFSDMVFVFTPKGDVIELPSGSVPIDFSYRIHSEIGNKTIGAKVNGKMVTLDYKLRTGD 447

Query: 619 VVEIITYNVSF 629
           +VEI+T   S+
Sbjct: 448 IVEILTSKHSY 458


>gi|429735228|ref|ZP_19269197.1| GTP diphosphokinase [Selenomonas sp. oral taxon 138 str. F0429]
 gi|429159340|gb|EKY01855.1| GTP diphosphokinase [Selenomonas sp. oral taxon 138 str. F0429]
          Length = 743

 Score =  344 bits (883), Expect = 7e-92,   Method: Compositional matrix adjust.
 Identities = 200/512 (39%), Positives = 301/512 (58%), Gaps = 53/512 (10%)

Query: 117 VSSDAFKEDSPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPV 176
           +S DA +  + + + + +R   SY +  +L+ +R+A   A +AH GQ R SG+ +IIHP+
Sbjct: 1   MSDDAQRAVTLDMILDKVR---SYQADADLDKIRKAYAYAEQAHSGQVRISGDAYIIHPL 57

Query: 177 EVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKL 236
            VA IL  L LD E+I A LLHD VEDT   T E +E EFG  +  +++G   V+KLG++
Sbjct: 58  NVAYILTGLHLDDETICAALLHDVVEDT-CATLEEMEAEFGKNIMALIDG---VTKLGRI 113

Query: 237 KCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATET 296
               E  S +DV+ ++ R+MFLAM +++RVI++KLADRLHNMRTL +M   K+  IA ET
Sbjct: 114 ----EYMSKEDVQLENYRKMFLAMAKDIRVIMIKLADRLHNMRTLKYMREDKRQRIAKET 169

Query: 297 LQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMK 356
           L+V+APLA  LG+  IK ELE+L   Y   E Y  +   V    KE ++ + E+ + + +
Sbjct: 170 LEVYAPLANRLGISNIKVELEDLCLRYLEPEAYYTLVEEVKHKRKERQEFIRESIEQIRE 229

Query: 357 KIEDDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVG 416
           K+E         +K EI+   K  YSIY+ + +   S+NE+  ++ +R+++         
Sbjct: 230 KLE------AAGIKAEIKGRAKHFYSIYRKMKRDNKSVNEIYDLSAVRVLV--------- 274

Query: 417 PLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQ 476
              S  + CY VLG++H +W PIP   KDYIA PK NGYQSLHTT++   Y     LE+Q
Sbjct: 275 ---SSVKDCYGVLGVIHAMWKPIPGRFKDYIAMPKSNGYQSLHTTVMTHGYP----LEIQ 327

Query: 477 IRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAI 536
           IRT+ M  ++E G+AAH+  +                  G+++   + N   ++SWL  +
Sbjct: 328 IRTKAMHQVSEFGVAAHWKYK----------------EAGRSIGATDEN-DQKMSWLRQM 370

Query: 537 REWQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGN 596
              Q+E+      +EF + +  D+    VFVFTPRG++ +LPKG+  +D+AY IHTEIG+
Sbjct: 371 VSLQKEY---DDPKEFFEALKLDVFSDEVFVFTPRGDVIDLPKGSNPIDFAYHIHTEIGH 427

Query: 597 KMVAAKVNGNLVSPTHVLANAEVVEIITYNVS 628
             V AKVNG +V   + L N ++V I+T   S
Sbjct: 428 HCVGAKVNGKIVPLEYKLKNGDIVSIVTNKAS 459


>gi|337285951|ref|YP_004625424.1| (p)ppGpp synthetase I SpoT/RelA [Thermodesulfatator indicus DSM
           15286]
 gi|335358779|gb|AEH44460.1| (p)ppGpp synthetase I, SpoT/RelA [Thermodesulfatator indicus DSM
           15286]
          Length = 727

 Score =  344 bits (883), Expect = 7e-92,   Method: Compositional matrix adjust.
 Identities = 200/501 (39%), Positives = 295/501 (58%), Gaps = 57/501 (11%)

Query: 129 RLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
           RL + L    SYL   +  LV +A + A +AH GQ RRSGEP++ HP+ VA IL  ++LD
Sbjct: 8   RLSDILDQIQSYLPGADTRLVEKAYVFAAKAHAGQVRRSGEPYLAHPLSVAYILARMKLD 67

Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
             +IAAGLLHDTVEDT+V T E I++ FG  V  IV+G   V+K+  L  +++ H     
Sbjct: 68  LPTIAAGLLHDTVEDTDV-TIEDIKKHFGPVVAEIVDG---VTKIAHLSARSKVHK---- 119

Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
           +A++ R+M LAM E++RVI+VKLADRLHNM+TL  MP HK+  IA ETL ++APLA  LG
Sbjct: 120 QAENFRKMLLAMAEDLRVILVKLADRLHNMKTLEFMPDHKRKRIAQETLDIYAPLASRLG 179

Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
           +  +K ELE+LSFMY   E+Y  ++  V  +    +  ++E  K++ +K++++       
Sbjct: 180 IDWLKQELEDLSFMYLYPEEYKTLREEVEKVVAARQDFIDEIKKVIKEKLDEE------G 233

Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINE---VNQIAQLRIIIKPKPCSGVGPLCSPQQIC 425
           ++ ++    K  YSI++ + ++  +I++   +  I  LR+I+K              + C
Sbjct: 234 IEAKVLGRRKHLYSIFRKLQRNNLAIDQLYLIYDIIGLRVIVKK------------VKEC 281

Query: 426 YHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLI 485
           Y VLG++H +W PIP   KDYI  PK N YQSLHTT+I        ++E+QIRTEEMD +
Sbjct: 282 YEVLGIIHSLWKPIPGRFKDYINLPKANMYQSLHTTVIG---PGGRQMEIQIRTEEMDRV 338

Query: 486 AERGIAAH--YSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEF 543
           A  GIAAH  Y  +  +    G  +                    ++ WL  + E Q+E 
Sbjct: 339 ANEGIAAHFLYKEQKIINAGTGKNK--------------------QLEWLERLVELQKEL 378

Query: 544 VGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKV 603
                 R+F++++  DL    V+VFTP G+IK LP G+T +D+AY IHTE+G+    AKV
Sbjct: 379 ---KNPRDFIESLRMDLFPDEVYVFTPEGDIKVLPVGSTPIDFAYAIHTEVGHHCAMAKV 435

Query: 604 NGNLVSPTHVLANAEVVEIIT 624
           NG LV   + L   ++VEI+T
Sbjct: 436 NGRLVPLDYELQTGDIVEIVT 456


>gi|296132724|ref|YP_003639971.1| (p)ppGpp synthetase I SpoT/RelA [Thermincola potens JR]
 gi|296031302|gb|ADG82070.1| (p)ppGpp synthetase I, SpoT/RelA [Thermincola potens JR]
          Length = 722

 Score =  344 bits (883), Expect = 7e-92,   Method: Compositional matrix adjust.
 Identities = 195/483 (40%), Positives = 287/483 (59%), Gaps = 61/483 (12%)

Query: 147 ELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNV 206
           + +      A +AH+GQ R SGEP+IIHP+ VA IL +LELD  +IAAGLLHD VEDT+ 
Sbjct: 20  KFIEETYRFAEKAHEGQTRISGEPYIIHPLSVAHILADLELDVVTIAAGLLHDVVEDTDS 79

Query: 207 VTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRV 266
              E IEE+FG  +  +V+G   V+KL ++  KN+     + + ++LR+MFLAM +++RV
Sbjct: 80  -PLETIEEKFGVEIALLVDG---VTKLSRISYKNK----MEQQVENLRKMFLAMAKDIRV 131

Query: 267 IIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNA 326
           I++KLADRLHNMRTL H+   KQ  I+ ETL++FAPLA  LG+++IK ELE+L+  Y   
Sbjct: 132 ILIKLADRLHNMRTLKHLAEPKQKEISEETLEIFAPLAHRLGIFKIKWELEDLALRYLEP 191

Query: 327 EDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKA 386
           + Y ++   +A    E E+ +    +IL +K+E+      + +K +I+   K  YSIYK 
Sbjct: 192 KKYYELVDGIAQKRAEREEYIARVTQILAEKLEN------VGIKADIQGRPKHFYSIYKK 245

Query: 387 VLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDY 446
           +L+ +  + E+  +  +R+I+               + CY  LG++H +W PIP   KDY
Sbjct: 246 MLEQQKELAEIYDLLAVRVIV------------DTVKDCYGALGIIHTLWKPIPGRFKDY 293

Query: 447 IATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVT 501
           IA PK N YQSLHTT+I     PF        E+QIRT EM   AE GIAAH+       
Sbjct: 294 IAMPKSNMYQSLHTTVIGPNGEPF--------EIQIRTWEMHRTAEYGIAAHWR------ 339

Query: 502 GLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLL 561
               +    GR          +     +++WL  + EWQ +      +REF++T+  DL 
Sbjct: 340 ----YKEGGGRG---------DEEFENKLAWLRQLLEWQNDM---RDAREFMETLKIDLF 383

Query: 562 GSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVE 621
              VFVFTP+G++  LP GA  +D+AY IHT++G++ + AKVNG +V   + LAN ++VE
Sbjct: 384 SDAVFVFTPKGDVVELPAGAIPIDFAYRIHTQVGHRCIGAKVNGKIVPLDYKLANGDIVE 443

Query: 622 IIT 624
           I+T
Sbjct: 444 ILT 446


>gi|403386962|ref|ZP_10929019.1| GTP pyrophosphokinase [Clostridium sp. JC122]
          Length = 725

 Score =  344 bits (883), Expect = 7e-92,   Method: Compositional matrix adjust.
 Identities = 203/481 (42%), Positives = 297/481 (61%), Gaps = 53/481 (11%)

Query: 145 ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDT 204
           ++E VR+A  L+FEAH  QKR SGEP+IIHP+EVA IL EL LD  +I AGLLHD +EDT
Sbjct: 17  DIEEVRKAFELSFEAHKEQKRESGEPYIIHPLEVACILAELGLDTSTIVAGLLHDVIEDT 76

Query: 205 NVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEV 264
           +  T+E I + F   V  +V+G   VSKLGK+K K +    ++ +AD++R+M LAM +++
Sbjct: 77  DY-TYEDICQMFSVEVADLVQG---VSKLGKIKYKTK----EEQQADNVRKMLLAMAKDI 128

Query: 265 RVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYT 324
           RVI++KLADRLHN+RTL      KQ   A ETL ++APLA  LG+ +IK ELE+LS  Y 
Sbjct: 129 RVILIKLADRLHNLRTLKFKKEAKQKEKAKETLDIYAPLAHRLGISKIKWELEDLSLRYL 188

Query: 325 NAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIY 384
           + ++Y ++ + ++    E E ++E     ++K ++D+  LD + +K+EI    K  YSIY
Sbjct: 189 HEKEYYELVKEISQKRAEREVQIEN----IIKNLQDN--LDKVGIKSEIEGRPKHFYSIY 242

Query: 385 KAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMK 444
           + ++K   +I+++  +  +R+++       +G        CY  LG+VH I+ PIP   K
Sbjct: 243 RKMVKKNKTIDQIFDLTAVRVLV-----DDIGD-------CYAALGIVHTIYKPIPGRFK 290

Query: 445 DYIATPKPNGYQSLHTTLI-PFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGL 503
           DYIA PKPN YQS+HTT+I PF       +E+QIRT EM  IAE GIAAH+  +  ++  
Sbjct: 291 DYIAMPKPNMYQSIHTTVIGPFGKP----VEIQIRTYEMHRIAEYGIAAHWKYKEGISN- 345

Query: 504 VGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGS 563
                             NN ++  R+SWL  + EWQ E      + EF++    DL   
Sbjct: 346 ------------------NNDSLESRLSWLREMLEWQGE---TSDAEEFMEGFKIDLFSD 384

Query: 564 RVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEII 623
            VFVFTP+G++ +LP  +T +D+AY IHT+IG+K   AKVNG +V  T+ L   E+V++I
Sbjct: 385 EVFVFTPKGDVISLPYESTPIDFAYSIHTDIGHKCTGAKVNGKIVPLTYHLKTGEIVDVI 444

Query: 624 T 624
           T
Sbjct: 445 T 445


>gi|89895197|ref|YP_518684.1| hypothetical protein DSY2451 [Desulfitobacterium hafniense Y51]
 gi|219669627|ref|YP_002460062.1| (p)ppGpp synthetase I SpoT/RelA [Desulfitobacterium hafniense
           DCB-2]
 gi|423073423|ref|ZP_17062162.1| GTP diphosphokinase [Desulfitobacterium hafniense DP7]
 gi|89334645|dbj|BAE84240.1| hypothetical protein [Desulfitobacterium hafniense Y51]
 gi|219539887|gb|ACL21626.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfitobacterium hafniense
           DCB-2]
 gi|361855729|gb|EHL07687.1| GTP diphosphokinase [Desulfitobacterium hafniense DP7]
          Length = 726

 Score =  344 bits (882), Expect = 9e-92,   Method: Compositional matrix adjust.
 Identities = 198/483 (40%), Positives = 288/483 (59%), Gaps = 50/483 (10%)

Query: 142 SPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTV 201
           SP  ++LV +A   A EAH GQ R SGE +I HP+EVA+IL ELE+D  +IAA  LHD V
Sbjct: 14  SPEGIKLVEKAYSFAEEAHRGQLRNSGEEYIQHPLEVAKILLELEMDEATIAAAFLHDVV 73

Query: 202 EDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMT 261
           EDT+  T E IE EFG+ V  +V+G   V+KLG+++ K    S ++++ ++LR+MFLAM 
Sbjct: 74  EDTHY-TNEDIEREFGSQVAILVDG---VTKLGRIEYK----SKEELQVENLRKMFLAMA 125

Query: 262 EEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSF 321
           +++RVI++KLADRLHNMRTL      KQ  IA ETL++FAPLA  LG+++IK ELE+LSF
Sbjct: 126 KDIRVILIKLADRLHNMRTLKFHSEKKQKEIALETLEIFAPLANRLGIFRIKWELEDLSF 185

Query: 322 MYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPY 381
            Y   ++Y  +   +A    E E ++ E    L K++ +      + +K +I    K  Y
Sbjct: 186 RYLKPQEYYDLSEGIALKRAEREVQINEVISQLSKRLAE------VGIKADISGRPKHFY 239

Query: 382 SIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPR 441
           SIY+ ++     ++E+  +  +R+I+                 CY  LG++H +W P+P 
Sbjct: 240 SIYRKMINQHRELSEIYDLTAVRVIV------------DSVNDCYGALGIIHTMWKPLPG 287

Query: 442 AMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVT 501
             KDYIA PKPN YQSLHTTL+    E     E+QIRT EM   AE GIAAH+  +    
Sbjct: 288 RFKDYIAMPKPNMYQSLHTTLVGAHGEP---FEIQIRTWEMHRTAEYGIAAHWKYK---- 340

Query: 502 GLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLL 561
              G  +P G             N   ++SWL  + EWQ +   +  + EF++++  DL 
Sbjct: 341 --EGAGKPVG------------GNFEQKLSWLRQMLEWQHD---SPDAGEFMESLKIDLF 383

Query: 562 GSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVE 621
              VFVFTP+G++  LP G+  VD+AY +HT++G++ V AK+N  +V     LAN ++VE
Sbjct: 384 ADTVFVFTPKGDVVELPAGSCPVDFAYRVHTDVGHRCVGAKINSRIVPLETKLANGDIVE 443

Query: 622 IIT 624
           I+T
Sbjct: 444 ILT 446


>gi|256828245|ref|YP_003156973.1| (p)ppGpp synthetase I SpoT/RelA [Desulfomicrobium baculatum DSM
           4028]
 gi|256577421|gb|ACU88557.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfomicrobium baculatum DSM
           4028]
          Length = 715

 Score =  344 bits (882), Expect = 9e-92,   Method: Compositional matrix adjust.
 Identities = 198/497 (39%), Positives = 293/497 (58%), Gaps = 54/497 (10%)

Query: 129 RLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
           R+ + L    +YLSP ++ L+++A + +  AH GQ R SGEP++ HP+EV+ IL +L LD
Sbjct: 3   RITDILDQASTYLSPLDVALIQKAYVFSAAAHAGQIRLSGEPYLSHPLEVSNILVDLRLD 62

Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
             +I AGLLHDTVEDT V +  +I E FG  V  IVEG TK+SK+          S +  
Sbjct: 63  AATIVAGLLHDTVEDTEV-SIPQIVELFGPEVGAIVEGVTKISKM-------NFESKEQA 114

Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
           +A+++R+M LAM +++RVI+VKLADRLHN+ TL     +KQ +IA ETL ++APLA  LG
Sbjct: 115 QAENIRKMILAMADDIRVILVKLADRLHNISTLEFQKEYKQRAIAQETLGIYAPLANRLG 174

Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
           +Y+IK +LEN    Y   + YA++   +     + +  +++ + ++   + +++      
Sbjct: 175 LYRIKVQLENYGLRYMKPDVYAQISEGINRYQDQGQAYIDKVSAMIQDVLAENE------ 228

Query: 369 VKTEIRSVCKEPYSIYKAVLKSRG-SINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYH 427
           +   ++   K  YSIY   +K RG +++++  +   R+I+            +  + CY 
Sbjct: 229 INGRVKGRIKHTYSIYHK-MKQRGLTLDQIFDMIAFRVIV------------NNLRECYT 275

Query: 428 VLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAE 487
           VLGLVH +W P+P   KDYI+ PK N YQSLH+T+I    E   R+E+QIRTEEM  +AE
Sbjct: 276 VLGLVHSLWKPVPGKFKDYISMPKANMYQSLHSTVIGPEGE---RIEIQIRTEEMHQLAE 332

Query: 488 RGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNM 547
            G+AAH+S            + +G            A  A R SWL  I +WQ +     
Sbjct: 333 NGVAAHWS-----------YKEHGS---------KKAQEADRFSWLRQILDWQGDL---K 369

Query: 548 TSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNL 607
            SR+F+ T++ DL    V+VFTPRG++K LP+G T VD+AY+IHTE+GN    AKVNG +
Sbjct: 370 DSRDFMSTLSLDLFQDEVYVFTPRGQVKELPEGGTPVDFAYLIHTEVGNHCAGAKVNGRI 429

Query: 608 VSPTHVLANAEVVEIIT 624
           V     L N + VEIIT
Sbjct: 430 VPLNTPLKNGDTVEIIT 446


>gi|289434803|ref|YP_003464675.1| GTP pyrophosphokinase [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|289171047|emb|CBH27589.1| GTP pyrophosphokinase [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
          Length = 738

 Score =  344 bits (882), Expect = 9e-92,   Method: Compositional matrix adjust.
 Identities = 195/490 (39%), Positives = 294/490 (60%), Gaps = 50/490 (10%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++   L LV++A   A ++H  Q R+SGEP+IIHP++VA IL EL++D  ++A+G LHD
Sbjct: 19  YMNQEHLALVKKAYEFARDSHKEQFRKSGEPYIIHPIQVAGILVELKMDPSTVASGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            VEDT  VT   +EEEFG+ V  +V+G   V+KLGK+K K    S ++ +A++ R+MF+A
Sbjct: 79  VVEDT-PVTLADLEEEFGSEVAMLVDG---VTKLGKIKYK----SHEEQQAENHRKMFIA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M +++RVI++KLADRLHNMRTL H+P  KQ  IA ETL++FAPLA  LG+ ++K ELE+ 
Sbjct: 131 MAQDIRVILIKLADRLHNMRTLKHLPVEKQRRIANETLEIFAPLAHRLGISRVKWELEDT 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           +  Y N + Y     R+  L K+     E     ++  + ++  LD + ++ +I    K 
Sbjct: 191 ALRYLNPQQYY----RIVHLMKQKRDARERYLHDVIDGVNEN--LDELNIQADISGRPKH 244

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIY+ + +     NE+  +  +RI++            S  + CY VLG++H  W P+
Sbjct: 245 IYSIYRKMSEQNKQFNEIYDLLAVRIVV------------SSIKDCYAVLGIIHTRWKPM 292

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK N YQS+HTT+I    E    LEVQIRT EM  IAE G+AAH+     
Sbjct: 293 PGRFKDYIAMPKSNMYQSIHTTVIGPQGEP---LEVQIRTHEMHQIAEYGVAAHW----- 344

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
                  A   G+    KT   N      +++W   I E+Q E   +  + EF++++  D
Sbjct: 345 -------AYKEGKVVNSKTSFDN------KLTWFREILEYQNE---SDNAEEFMESLKLD 388

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           L    V+VFTP+G++  LP G+  +D+AY +HTEIGNK + AK+NG +V+  + L   ++
Sbjct: 389 LFSDVVYVFTPKGDVYELPNGSVPLDFAYRVHTEIGNKTIGAKINGKIVTLDYKLKTGDI 448

Query: 620 VEIITYNVSF 629
           ++I+T   S+
Sbjct: 449 IDILTSKHSY 458


>gi|257792451|ref|YP_003183057.1| (p)ppGpp synthetase I SpoT/RelA [Eggerthella lenta DSM 2243]
 gi|317490319|ref|ZP_07948805.1| RelA/SpoT family protein [Eggerthella sp. 1_3_56FAA]
 gi|325833401|ref|ZP_08165850.1| GTP diphosphokinase [Eggerthella sp. HGA1]
 gi|257476348|gb|ACV56668.1| (p)ppGpp synthetase I, SpoT/RelA [Eggerthella lenta DSM 2243]
 gi|316910609|gb|EFV32232.1| RelA/SpoT family protein [Eggerthella sp. 1_3_56FAA]
 gi|325485325|gb|EGC87794.1| GTP diphosphokinase [Eggerthella sp. HGA1]
          Length = 802

 Score =  344 bits (882), Expect = 9e-92,   Method: Compositional matrix adjust.
 Identities = 206/523 (39%), Positives = 305/523 (58%), Gaps = 56/523 (10%)

Query: 103 HVACKRWRLCLSPSVSSDAFKEDSPERLWEDL-RPTISYLSPNELELVRRALMLAFEAHD 161
           HVA K      +P    DA    +PE  + +L R T  YLS ++  ++ +A   A EAH+
Sbjct: 32  HVAEK----SFAPEAKKDALAPKTPEERFAELQRLTSVYLSEDDEAMLAKAFRFASEAHE 87

Query: 162 GQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVR 221
           GQ R+SGEPF+ HPVEVA IL +L +D E++ A LLHDTVEDT+V T +++E EF   V 
Sbjct: 88  GQCRKSGEPFVAHPVEVAIILADLRMDVETLCAALLHDTVEDTSV-TRDQVEAEFNPQVA 146

Query: 222 RIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTL 281
           ++VEG TK++++       E  S+ D +A  +R+MF+AM++++RVI++KLADRLHNMRTL
Sbjct: 147 QLVEGVTKITRI-------EVESLTDEQAATIRKMFVAMSKDIRVIVIKLADRLHNMRTL 199

Query: 282 SHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYK 341
             +   ++   A ETL+++AP+A  LG+  IK ELE+LSF Y     + ++ R V +   
Sbjct: 200 GALREDRRIFKARETLEIYAPIAHRLGINNIKWELEDLSFYYLEPNKFKQISRMVTESRS 259

Query: 342 EHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIA 401
           E E  L++   IL  ++E       + ++ +I    K  YSIY+ + K     +E+  + 
Sbjct: 260 EREGYLDQIISILHDEMEK------VNIQAQIMGRPKHLYSIYQKMTKKGKGFSEIYDLI 313

Query: 402 QLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTT 461
            +R+I+K              + CY  LG VH +W P+P   KDYIA PK N YQSLHTT
Sbjct: 314 AVRVIVK------------SVKDCYSALGAVHTLWHPMPGRFKDYIAMPKFNMYQSLHTT 361

Query: 462 LIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCL 521
           +I     +   LEVQIRTE+M   +E G+AAH+           +    G+S        
Sbjct: 362 VIG---PAGRPLEVQIRTEDMHRQSEYGVAAHWR----------YKEKGGKS-------- 400

Query: 522 NNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGA 581
               +  +++WL  + +WQ+E   +  SREF+  +  DL  + VFVFTP+GE+ +L  G+
Sbjct: 401 -GDALDQQLAWLRQMVDWQDE---SQDSREFLKDLKVDLAPTEVFVFTPKGEVMSLRAGS 456

Query: 582 TVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
           T VD+AY IHTE+GN  V AKVNG +V  T+ L   + V+I+T
Sbjct: 457 TPVDFAYAIHTEVGNHCVGAKVNGAIVPLTYELQLGDRVDILT 499


>gi|328954063|ref|YP_004371397.1| (p)ppGpp synthetase I SpoT/RelA [Desulfobacca acetoxidans DSM
           11109]
 gi|328454387|gb|AEB10216.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfobacca acetoxidans DSM
           11109]
          Length = 717

 Score =  344 bits (882), Expect = 9e-92,   Method: Compositional matrix adjust.
 Identities = 193/487 (39%), Positives = 293/487 (60%), Gaps = 52/487 (10%)

Query: 138 ISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLL 197
           +S+    ++ L+++A + +  +H+GQ R SG+P++ HP+EVA +L ++ LD  S+A GLL
Sbjct: 15  LSHHPEADVSLIQKAYIFSARSHEGQTRLSGQPYLSHPLEVAYLLAQMGLDPVSVACGLL 74

Query: 198 HDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMF 257
           HDTVEDTN  + + ++E FG  V  I+ G TK+S++   K         D +A+ +R+M 
Sbjct: 75  HDTVEDTNT-SLDDLDEIFGEEVTDIINGVTKISQISFDKKI-------DQQAEYIRKMI 126

Query: 258 LAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELE 317
           LAM  ++RVI+VKLADR+HNMRTL +M P  Q  I+ ETL +FAPLA  LGM +IK+ELE
Sbjct: 127 LAMAHDIRVILVKLADRVHNMRTLGYMKPESQKRISQETLDIFAPLAGRLGMGRIKAELE 186

Query: 318 NLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVC 377
           +L+F Y   E Y +++  +A    E E+ ++E ++I+ +K+ +   +       E++   
Sbjct: 187 DLAFYYLEPEIYQQIQDGLARKRGEREQYIKEISEIINQKLGEHHLVG------EVKGRP 240

Query: 378 KEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWT 437
           K  Y IY+ ++  + S+++V  +   RI++K                CY  LGL+H +W 
Sbjct: 241 KHLYGIYRKMIAQQISLDQVYDLIAFRIVLKTLSE------------CYETLGLIHSLWR 288

Query: 438 PIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGR 497
           P+P   KDYIA PK N YQSLHTT+I    E   R+E+QIRTE M+ IAE GIAAH++ +
Sbjct: 289 PVPNRFKDYIAMPKANKYQSLHTTVIGPYGE---RMEIQIRTEGMNRIAEEGIAAHWAYK 345

Query: 498 VFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTIT 557
                            R +    +N    LR SWL  I EWQ++       ++F++T+ 
Sbjct: 346 ----------------ERRQVQQDDN----LRFSWLRQIIEWQKDLT---NPQDFLNTVR 382

Query: 558 RDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANA 617
            +L    VFVFTP+G+IK LP+G+T VD+AY IHTE+G+    A+VNG +V   + L + 
Sbjct: 383 MELYPEEVFVFTPKGQIKELPRGSTPVDFAYAIHTEVGHHCTGARVNGRMVPLKYELQHG 442

Query: 618 EVVEIIT 624
           + VEIIT
Sbjct: 443 DSVEIIT 449


>gi|199599338|ref|ZP_03212736.1| Guanosine polyphosphate pyrophosphohydrolase/synthetase
           [Lactobacillus rhamnosus HN001]
 gi|258508564|ref|YP_003171315.1| GTP pyrophosphokinase [Lactobacillus rhamnosus GG]
 gi|385828226|ref|YP_005865998.1| GTP pyrophosphokinase [Lactobacillus rhamnosus GG]
 gi|385835394|ref|YP_005873168.1| relA/SpoT family protein [Lactobacillus rhamnosus ATCC 8530]
 gi|421768716|ref|ZP_16205426.1| GTP pyrophosphokinase , (p)ppGpp synthetase I [Lactobacillus
           rhamnosus LRHMDP2]
 gi|421771132|ref|ZP_16207793.1| GTP pyrophosphokinase , (p)ppGpp synthetase I [Lactobacillus
           rhamnosus LRHMDP3]
 gi|199589777|gb|EDY97885.1| Guanosine polyphosphate pyrophosphohydrolase/synthetase
           [Lactobacillus rhamnosus HN001]
 gi|257148491|emb|CAR87464.1| GTP pyrophosphokinase [Lactobacillus rhamnosus GG]
 gi|259649871|dbj|BAI42033.1| GTP pyrophosphokinase [Lactobacillus rhamnosus GG]
 gi|355394885|gb|AER64315.1| relA/SpoT family protein [Lactobacillus rhamnosus ATCC 8530]
 gi|411185565|gb|EKS52692.1| GTP pyrophosphokinase , (p)ppGpp synthetase I [Lactobacillus
           rhamnosus LRHMDP2]
 gi|411186567|gb|EKS53691.1| GTP pyrophosphokinase , (p)ppGpp synthetase I [Lactobacillus
           rhamnosus LRHMDP3]
          Length = 741

 Score =  344 bits (882), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 196/486 (40%), Positives = 285/486 (58%), Gaps = 49/486 (10%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           +Y++P  L  V +A   A   H  Q R+SGEP+IIHP++VA IL EL++D E++A+G LH
Sbjct: 18  AYMNPEHLAFVEKAYKFAAYVHKDQVRKSGEPYIIHPIQVAGILAELKMDPETVASGYLH 77

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDTN+ T   IEE FG  V  IV+G TK+SK+  +  K+E        A++ R+M L
Sbjct: 78  DVVEDTNI-TLGDIEEVFGHDVAVIVDGVTKLSKVTYVAHKDE-------LAENHRKMLL 129

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM +++RVI+VKLADRLHNMRTL H+ P KQ  IA ETL+++APLA  LG+  IK ELE+
Sbjct: 130 AMAKDLRVIMVKLADRLHNMRTLQHLRPDKQRRIANETLEIYAPLADRLGISTIKWELED 189

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
           LS  Y N + Y ++   +     E E  ++EA + + K + D      + +K EI    K
Sbjct: 190 LSLRYLNPQQYYRIAHLMNSKRTEREAYIQEAIEEIKKALAD------LHIKYEIYGRPK 243

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIYK +       +E+  +  +R+I                + CY VLG +H  W P
Sbjct: 244 HIYSIYKKMRDKHKQFDELYDLLAIRVI------------TETIKDCYAVLGAIHTKWKP 291

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PK N YQS+HTT+I  + +    LEVQIRTEEM  +AE G+AAH++ + 
Sbjct: 292 MPGRFKDYIAMPKANLYQSIHTTVIGPMGKP---LEVQIRTEEMHHVAEYGVAAHWAYK- 347

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                            G+T  +       ++     I E Q+E   +  + +F++++  
Sbjct: 348 ----------------EGQTSKVQYDKAGKKLDIFREILELQDE---SSDAADFMESVKG 388

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           D+   RV+VFTP+G++  LPKG+  +D+ Y+IHTE+GN  V AKVNG +V   +VL N +
Sbjct: 389 DIFTDRVYVFTPKGDVYELPKGSNPLDFGYLIHTEVGNHTVGAKVNGKIVPLNYVLKNGD 448

Query: 619 VVEIIT 624
           +VE++T
Sbjct: 449 IVEMLT 454


>gi|229552374|ref|ZP_04441099.1| GTP diphosphokinase [Lactobacillus rhamnosus LMS2-1]
 gi|229314276|gb|EEN80249.1| GTP diphosphokinase [Lactobacillus rhamnosus LMS2-1]
          Length = 769

 Score =  344 bits (882), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 196/486 (40%), Positives = 285/486 (58%), Gaps = 49/486 (10%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           +Y++P  L  V +A   A   H  Q R+SGEP+IIHP++VA IL EL++D E++A+G LH
Sbjct: 46  AYMNPEHLAFVEKAYKFAAYVHKDQVRKSGEPYIIHPIQVAGILAELKMDPETVASGYLH 105

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDTN+ T   IEE FG  V  IV+G TK+SK+  +  K+E        A++ R+M L
Sbjct: 106 DVVEDTNI-TLGDIEEVFGHDVAVIVDGVTKLSKVTYVAHKDE-------LAENHRKMLL 157

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM +++RVI+VKLADRLHNMRTL H+ P KQ  IA ETL+++APLA  LG+  IK ELE+
Sbjct: 158 AMAKDLRVIMVKLADRLHNMRTLQHLRPDKQRRIANETLEIYAPLADRLGISTIKWELED 217

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
           LS  Y N + Y ++   +     E E  ++EA + + K + D      + +K EI    K
Sbjct: 218 LSLRYLNPQQYYRIAHLMNSKRTEREAYIQEAIEEIKKALAD------LHIKYEIYGRPK 271

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIYK +       +E+  +  +R+I                + CY VLG +H  W P
Sbjct: 272 HIYSIYKKMRDKHKQFDELYDLLAIRVI------------TETIKDCYAVLGAIHTKWKP 319

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PK N YQS+HTT+I  + +    LEVQIRTEEM  +AE G+AAH++ + 
Sbjct: 320 MPGRFKDYIAMPKANLYQSIHTTVIGPMGKP---LEVQIRTEEMHHVAEYGVAAHWAYK- 375

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                            G+T  +       ++     I E Q+E   +  + +F++++  
Sbjct: 376 ----------------EGQTSKVQYDKAGKKLDIFREILELQDE---SSDAADFMESVKG 416

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           D+   RV+VFTP+G++  LPKG+  +D+ Y+IHTE+GN  V AKVNG +V   +VL N +
Sbjct: 417 DIFTDRVYVFTPKGDVYELPKGSNPLDFGYLIHTEVGNHTVGAKVNGKIVPLNYVLKNGD 476

Query: 619 VVEIIT 624
           +VE++T
Sbjct: 477 IVEMLT 482


>gi|269836765|ref|YP_003318993.1| (p)ppGpp synthetase I SpoT/RelA [Sphaerobacter thermophilus DSM
           20745]
 gi|269786028|gb|ACZ38171.1| (p)ppGpp synthetase I, SpoT/RelA [Sphaerobacter thermophilus DSM
           20745]
          Length = 748

 Score =  344 bits (882), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 198/498 (39%), Positives = 297/498 (59%), Gaps = 52/498 (10%)

Query: 131 WEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDW 189
           W DL   I    P  +L LVR+A   A +AH G+ RRSG+P+I HP+ VA IL E++LD 
Sbjct: 31  WADLEQVIRERMPGMDLTLVRKAYEFADQAHAGKLRRSGDPYISHPLAVAIILAEMQLDQ 90

Query: 190 ESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSV---Q 246
           E++ A LLHD +EDT+  + E +   FG  + R+V+G   V+KLG+++   E  SV   +
Sbjct: 91  ETLCAALLHDVIEDTDT-SVEELTTIFGERIARLVDG---VTKLGRIRWATEEDSVTREK 146

Query: 247 DVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKL 306
           + +A+ LR+MFLAM ++VRV+++KLADRLHNMRTL HMP  KQ   A ET++++APLA  
Sbjct: 147 ERQAESLRKMFLAMVDDVRVVLIKLADRLHNMRTLEHMPRAKQLRSAQETMEIYAPLANR 206

Query: 307 LGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDL 366
           LG++Q+KSELE+L+  Y + + Y  +KR +     + E+ L+     L K + +      
Sbjct: 207 LGIWQLKSELEDLALRYLDPQTYFSIKRALDRRGTDRERYLQRVINDLTKALAE------ 260

Query: 367 MTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICY 426
             ++ EI +  K   SI + + +   S +E+  +  +R+I+  K            + CY
Sbjct: 261 AGIRAEISAREKHITSIARKMERKGRSFDEIYDVLGVRVIVDEK------------KDCY 308

Query: 427 HVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIA 486
             LG++H +W PIP    DYIATPK + YQS+HT +   L      LE+QIRT EM  +A
Sbjct: 309 GALGVIHTMWHPIPGEFDDYIATPKESMYQSIHTAV---LGPDGHPLEIQIRTAEMHHVA 365

Query: 487 ERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGN 546
           E GIAAH+    +  G    ARP             + N+  +I+WL  + +W++E V  
Sbjct: 366 EYGIAAHWR---YKEG----ARP-------------DPNVEAKIAWLRQLMDWRDEVV-- 403

Query: 547 MTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGN 606
             ++EFV+++  D+    ++VFTP+G+I  LP GAT VD+AY IHTE+G++ V AKVN  
Sbjct: 404 -DAQEFVESLKSDVFQEMIYVFTPKGDIIELPAGATPVDFAYRIHTEVGHQCVGAKVNNQ 462

Query: 607 LVSPTHVLANAEVVEIIT 624
           LV   + L N +VV+I+T
Sbjct: 463 LVPLNYRLQNGQVVQIMT 480


>gi|359461025|ref|ZP_09249588.1| ppGpp 3'-pyrophosphohydrolase [Acaryochloris sp. CCMEE 5410]
          Length = 732

 Score =  344 bits (882), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 202/482 (41%), Positives = 283/482 (58%), Gaps = 46/482 (9%)

Query: 145 ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDT 204
           E  L+ RA    ++ H+GQ+R SGEP+I HPV VA +L +L      IAAG LHD VEDT
Sbjct: 15  EQTLICRAFNFGYQLHEGQRRASGEPYIAHPVSVAELLRDLGGSAAMIAAGFLHDVVEDT 74

Query: 205 NVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEV 264
           +V T E IE EFG  VR++VEG TK+SK      K E       +A++ R+MFLAM +++
Sbjct: 75  DV-TPETIEAEFGLEVRQLVEGVTKLSKFN-FSTKTER------EAENFRRMFLAMAQDI 126

Query: 265 RVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYT 324
           RVI+VKLADRLHNMRTL H+PP KQ  IA ET  VFAPLA  LG+++ K ELE+L+F Y 
Sbjct: 127 RVIVVKLADRLHNMRTLEHLPPAKQRRIAQETRDVFAPLANRLGIWRFKWELEDLAFKYL 186

Query: 325 NAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIY 384
             + Y K+++ VAD   + E+ +E+A  IL  ++E      + +   EI    K  +SI 
Sbjct: 187 EPDTYRKMQQLVADKRTDREEHIEQAITILHDRLE-----PICSNHLEISGRPKHLFSIS 241

Query: 385 KAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMK 444
           + + + +   +E+  +A +R+I+K              + CY  L +VH  + PIP   K
Sbjct: 242 QKMERQQKEFHEIYDVAAVRVIVKTN------------EECYRALAVVHDCFRPIPGRFK 289

Query: 445 DYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLV 504
           DYI  PK N YQSLHT +I         LEVQIRTE M  IAE GIAAH+          
Sbjct: 290 DYIGLPKSNRYQSLHTVVIGLGGRP---LEVQIRTEAMHHIAEYGIAAHWK--------- 337

Query: 505 GHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSR 564
              + +   P GKT    +     + +WL  + EWQ +      ++E++D +  +L  S 
Sbjct: 338 --YKESSNQP-GKTAWSPDDE---KFTWLRQLLEWQSDL---KDAQEYLDNVKDNLFDSE 388

Query: 565 VFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
           V+VFTP+G++ +L +GAT VD+AY IHTE+GN    A+VNG +V+    L N ++VEI+T
Sbjct: 389 VYVFTPKGDLIDLTQGATPVDFAYRIHTEVGNHCFGARVNGRMVTLDTPLDNGDIVEIMT 448

Query: 625 YN 626
            N
Sbjct: 449 QN 450


>gi|410464128|ref|ZP_11317593.1| (p)ppGpp synthetase, RelA/SpoT family [Desulfovibrio magneticus
           str. Maddingley MBC34]
 gi|409982755|gb|EKO39179.1| (p)ppGpp synthetase, RelA/SpoT family [Desulfovibrio magneticus
           str. Maddingley MBC34]
          Length = 740

 Score =  344 bits (882), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 206/496 (41%), Positives = 285/496 (57%), Gaps = 50/496 (10%)

Query: 129 RLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
           R+ E L  T +YL+  E  L+ +A + +  AH GQ R SGEP++ HP+E A IL ++ LD
Sbjct: 3   RINEILDKTSAYLNEQEQALITKAYVFSAAAHAGQVRLSGEPYLSHPLEAAGILADMRLD 62

Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
             SIA+GLLHDTVEDT   T + +EE FG  V  IV+G TK+S L   + K E       
Sbjct: 63  AASIASGLLHDTVEDTKA-TVDELEELFGEEVADIVDGVTKIS-LIPFETKEE------A 114

Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
           +A+++R+M LAM E++RV++VKLADRLHNMRTL    PHKQ+ IA ET+ ++APLA  LG
Sbjct: 115 QAENIRKMILAMAEDIRVVLVKLADRLHNMRTLEFQKPHKQAIIAQETMDIYAPLANRLG 174

Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
           +++IK+ELE+ SF Y   + YA++   VA  +   E  +E     L      +  L    
Sbjct: 175 LHRIKTELEDWSFRYLKPDIYAQLVEGVATHHTVDETFIERVIGHL------NDLLGPNN 228

Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
           +K  I    K  +S++  +     +I++V+ +   R+I++              + CYHV
Sbjct: 229 IKARIVGRRKHLWSVHNKMRVQGLTIDQVHDLVAFRVIVETI------------RECYHV 276

Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAER 488
           LGLVH +W P+P   KDYI+ PK N YQSLHTT++    E   R+E+QIRTEEM  +AE 
Sbjct: 277 LGLVHSLWKPVPGRFKDYISMPKANMYQSLHTTVVGPGGE---RIEIQIRTEEMHRLAEE 333

Query: 489 GIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMT 548
           G+AAH+  +          R  G+          N     R  WL  I +WQ E      
Sbjct: 334 GVAAHWKYK---------EREKGKF---------NPKDVERFQWLRQIMDWQREL---KD 372

Query: 549 SREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLV 608
           SREFV  +  DL    V+VFTP+G++K LP+GAT VD A++IHT +G     AKVNG LV
Sbjct: 373 SREFVANLRFDLFQDEVYVFTPKGDVKELPEGATAVDLAFLIHTAVGEHCAGAKVNGKLV 432

Query: 609 SPTHVLANAEVVEIIT 624
                L N + VEIIT
Sbjct: 433 PLETPLKNGDTVEIIT 448


>gi|210616270|ref|ZP_03291020.1| hypothetical protein CLONEX_03241 [Clostridium nexile DSM 1787]
 gi|210149868|gb|EEA80877.1| hypothetical protein CLONEX_03241 [Clostridium nexile DSM 1787]
          Length = 781

 Score =  343 bits (881), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 200/502 (39%), Positives = 302/502 (60%), Gaps = 51/502 (10%)

Query: 126 SPERLWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
            P+ L+E L   I    P+ ++ +V +A  +A+ AH+GQ R+SGE +IIHP+ V  IL +
Sbjct: 44  DPKMLYEALIKRIRKYHPSTDISMVEKAFNIAYHAHEGQFRKSGEAYIIHPLWVGIILAD 103

Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
           LELD E+I AG+LHD VEDT V+T + I E FG+ V  +V+G   V+KLG+L    +   
Sbjct: 104 LELDKETIVAGILHDVVEDT-VMTEQEITEIFGSEVALLVDG---VTKLGQLSYSADKLE 159

Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
           VQ   A++LR+MFLAM +++RVI++KLADRLHNMRTL  M P KQ   A ET+ ++AP+A
Sbjct: 160 VQ---AENLRKMFLAMAKDIRVILIKLADRLHNMRTLQFMRPEKQIEKARETMDIYAPIA 216

Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
           + LG+ +IK+EL++LS  Y+  E +  + +++     E E+ +++  +      E  + +
Sbjct: 217 QRLGISRIKTELDDLSLKYSQPEVFYDLVQQINARKTEREEFVQQIVE------EVSEHM 270

Query: 365 DLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
               +K E++   K  +SIYK ++    +++++  +  +RII++              + 
Sbjct: 271 KNAKIKAEVKGRVKHFFSIYKKMVNQDKTVDQIYDLFAVRIIVE------------SVKD 318

Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDL 484
           CY  LG++H ++TPIP   KDYIA PKPN YQSLHTTL+  + +     E+QIRTEEM  
Sbjct: 319 CYAALGVIHEMYTPIPGRFKDYIAMPKPNMYQSLHTTLMSSVGQP---FEIQIRTEEMHK 375

Query: 485 IAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFV 544
            AE GIAAH+  +               S  GK      A    ++SWL  I EWQ+   
Sbjct: 376 TAEYGIAAHWKYK--------------ESNDGKKSVA--AQEEEKLSWLRQILEWQQ--- 416

Query: 545 GNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAK 602
            +  +REF+  +    DL    V+ FTP G++KNLP G+T VD+AY IH+ +GNKMV A+
Sbjct: 417 -DTDNREFLSLLKGDLDLFAEDVYCFTPNGDVKNLPNGSTPVDFAYAIHSAVGNKMVGAR 475

Query: 603 VNGNLVSPTHVLANAEVVEIIT 624
           VNG LV+  + + N + +EI+T
Sbjct: 476 VNGKLVNIDYKIQNGDRIEILT 497


>gi|374709317|ref|ZP_09713751.1| (p)ppGpp synthetase I SpoT/RelA [Sporolactobacillus inulinus CASD]
          Length = 724

 Score =  343 bits (881), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 201/492 (40%), Positives = 286/492 (58%), Gaps = 52/492 (10%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           +YL   ++E V+ A   A EAH GQ R+SGEP+IIHP+EVA IL +L +D  +I +G LH
Sbjct: 12  TYLDAKDIETVKEAYRFADEAHKGQVRKSGEPYIIHPIEVAGILVQLNMDVTTIVSGFLH 71

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT V T + I  +FG  V  +V+G TK+          E  S +D +A++ R+MF+
Sbjct: 72  DVVEDTRV-TLDDIRVKFGDNVAELVDGVTKLRNF-------EYTSKEDQQAENHRKMFV 123

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM  ++R +IVKLADRLHNMRTL +M   KQ   A ETL+++APLA  LG+  IK ELE+
Sbjct: 124 AMARDLRCVIVKLADRLHNMRTLKYMRHEKQIQKANETLEIYAPLANRLGISAIKWELED 183

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIED-DQFLDLMTVKTEIRSVC 377
           +S  Y   + Y K    + +L K+  +E E     + K +ED   ++  + +  E+    
Sbjct: 184 ISLRYLKPQQYYK----IVNLMKQKREERE---AYIAKVVEDLKAYVKSVHIPAEVSGRP 236

Query: 378 KEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWT 437
           K  YSIY+ ++      NE+  +  +RII+K              + CY +LG++H  W 
Sbjct: 237 KHIYSIYRKMVNQHKQFNEIYDLFAVRIIVK------------TIKDCYAILGIIHTHWK 284

Query: 438 PIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGR 497
           P+P   KDYIA PKPN YQSLHTT+I    +    LEVQIRTEEM  +AE GIAAH++ +
Sbjct: 285 PMPGRFKDYIAMPKPNMYQSLHTTVIGPKGDP---LEVQIRTEEMHDVAEYGIAAHWAYK 341

Query: 498 VFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTIT 557
                             GK   +NN     R++W   I E+Q E      ++EF++T+ 
Sbjct: 342 -----------------EGKVKNINN-KFEDRLTWFREILEYQNE---TDDAKEFMETLK 380

Query: 558 RDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANA 617
            DL    VFVFTP+G++  LP G+  +D+AY IHTEIGNK V A+VNG +V   + L   
Sbjct: 381 MDLFSDTVFVFTPKGDVIELPVGSVPIDFAYRIHTEIGNKTVGARVNGKMVPLDYKLKTG 440

Query: 618 EVVEIITYNVSF 629
           ++VE++T N S+
Sbjct: 441 DIVEVMTSNHSY 452


>gi|150390117|ref|YP_001320166.1| (p)ppGpp synthetase I SpoT/RelA [Alkaliphilus metalliredigens QYMF]
 gi|149949979|gb|ABR48507.1| (p)ppGpp synthetase I, SpoT/RelA [Alkaliphilus metalliredigens
           QYMF]
          Length = 727

 Score =  343 bits (881), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 199/505 (39%), Positives = 297/505 (58%), Gaps = 61/505 (12%)

Query: 130 LWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
           + E+L   I   +P  + EL+ RA      AH GQ R+SGE + IHPVEVA+IL EL++D
Sbjct: 1   MLENLIAKIEEYNPQCDAELIIRAYHYGENAHQGQYRKSGEQYFIHPVEVAKILIELKMD 60

Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
             +IAAGLLHD +EDT    + ++ EEFG  V  +VEG TK+++L          S ++ 
Sbjct: 61  SSTIAAGLLHDVIEDTPY-GYGKVREEFGEEVAELVEGVTKLTRLS-------FESKEER 112

Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
           +A++LR+MF+AM +++RV+++KLADRLHNMRTL +    K+   A ETL++FAP+A  LG
Sbjct: 113 QAENLRKMFIAMAKDIRVVLIKLADRLHNMRTLKYQSDEKKKEKAMETLEIFAPIAHRLG 172

Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
           + +IK ELE+L  +Y + E Y  +  +VA   ++ E  + +   IL      D  +D   
Sbjct: 173 ISRIKWELEDLCLLYIDPEGYYDLVDKVAKKRRDRETFINKVISIL------DGKMDEFG 226

Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
           ++ EI    K  YSIY+ ++    S +E+      R+I+            +  + CY +
Sbjct: 227 IENEISGRPKHFYSIYRKMVYQNKSFDEIFDFIAFRVIV------------NNVKDCYGI 274

Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMD 483
           LG+VH +W PIP   KDYIA PKPN YQSLHTT+I     PF        E+QIRT+EM 
Sbjct: 275 LGIVHTLWKPIPGRFKDYIAMPKPNMYQSLHTTVIGPNGEPF--------EIQIRTKEMH 326

Query: 484 LIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEF 543
            IAE GIAAH+S +                  GK++  N  ++  +++WL  + EW+++ 
Sbjct: 327 QIAEFGIAAHWSYK-----------------EGKSIN-NEDDMDTKLTWLRQMLEWEKD- 367

Query: 544 VGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKV 603
                 +EF+ ++  DL  + VFVFTP+GE+ NLP G+T +D+AY IH+++GNK V AKV
Sbjct: 368 --TKDPKEFMASLKVDLYTNEVFVFTPKGEVINLPSGSTPIDFAYKIHSDVGNKCVGAKV 425

Query: 604 NGNLVSPTHVLANAEVVEIITYNVS 628
           +  +V   + L N  +VEI+T + S
Sbjct: 426 DSRMVPIDYKLKNGNIVEILTSSQS 450


>gi|359412257|ref|ZP_09204722.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium sp. DL-VIII]
 gi|357171141|gb|EHI99315.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium sp. DL-VIII]
          Length = 736

 Score =  343 bits (881), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 196/480 (40%), Positives = 289/480 (60%), Gaps = 43/480 (8%)

Query: 145 ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDT 204
           ++++V+RA   A +AH  QKR SGEP+IIHP+ VA IL EL +D  +I AGLLHD +EDT
Sbjct: 17  DVDMVKRAYNFAEKAHKEQKRESGEPYIIHPIAVAEILAELGMDTNTIVAGLLHDVIEDT 76

Query: 205 NVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEV 264
           +  +++     F A +  +V+G TK++KLG+++ K +    ++ +AD++R+M LAM +++
Sbjct: 77  DC-SYDETVNLFNAEIADLVDGVTKLTKLGEMEYKTK----EEQQADNVRKMLLAMAKDI 131

Query: 265 RVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYT 324
           RVII+KLADRLHNMRTL  MP  KQ + A ETL ++APLA  LGM +IK ELE+L F Y 
Sbjct: 132 RVIIIKLADRLHNMRTLKFMPEKKQKNKAKETLDIYAPLAHRLGMSKIKWELEDLCFRYL 191

Query: 325 NAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIY 384
           + ++Y ++   +A+   E E  +++    L +K+E         ++++I    K  YSIY
Sbjct: 192 HEKEYYELVDSIAEKRVERETYIKDIVSDLEEKLE------AAGIQSDIDGRPKHFYSIY 245

Query: 385 KAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMK 444
           K ++    SI ++  +  +R+            L +  + CY VLG+VH I+ PIP   K
Sbjct: 246 KKMVSKNKSIEQIFDLTAIRV------------LVNSVKDCYGVLGIVHTIYRPIPGRFK 293

Query: 445 DYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLV 504
           DYIA PKPN YQSLHTT+I    ++    E+QIRT EM   AE GIAAH+  +       
Sbjct: 294 DYIAMPKPNMYQSLHTTVIGPQGKT---FEIQIRTFEMHKTAEYGIAAHWKYK------- 343

Query: 505 GHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSR 564
                 G + +G+       +   ++ WL  + EWQ+E      + EF++    DL    
Sbjct: 344 -----EGDTAKGEQD--KQKDFEKKLVWLRDMLEWQKE---TSDAEEFIEGFKIDLFSDE 393

Query: 565 VFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
           VFVFTP+G + NL + AT +D+AY IHT+IGNK V AKVNG +V   + L   E+VEI+T
Sbjct: 394 VFVFTPKGVVINLCRDATPIDFAYRIHTDIGNKCVGAKVNGKIVPLDYSLKTGEIVEILT 453


>gi|299144024|ref|ZP_07037104.1| GTP diphosphokinase [Peptoniphilus sp. oral taxon 386 str. F0131]
 gi|298518509|gb|EFI42248.1| GTP diphosphokinase [Peptoniphilus sp. oral taxon 386 str. F0131]
          Length = 713

 Score =  343 bits (881), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 200/496 (40%), Positives = 293/496 (59%), Gaps = 57/496 (11%)

Query: 132 EDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWE 190
           E+L   I   +P+ E+EL+  A  LA E H  QKR SGEP+I+HP  VA IL ++ +D  
Sbjct: 3   EELLEKIKIYNPSVEVELIEEAFNLASEHHKKQKRNSGEPYIVHPFNVALILADMNMDTA 62

Query: 191 SIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKA 250
           +I AGLLHDT+EDT+V T+E I++EFG  +  +VEG TK+ KL          + Q+ +A
Sbjct: 63  TIIAGLLHDTIEDTDV-TYEDIKKEFGVEIADLVEGVTKLKKLNY-------QTKQEKQA 114

Query: 251 DDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMY 310
           +++R+M LAM  ++RVIIVKLADRLHNMRTL +M   K+   A ETL+++AP+A  LGM 
Sbjct: 115 ENIRKMVLAMARDIRVIIVKLADRLHNMRTLEYMTDAKKHEKALETLEIYAPIADRLGMS 174

Query: 311 QIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKI--EDDQFLDLMT 368
           +IK ELE+LS  Y + E+Y ++   V    + HE+E       L+ KI  E ++ L+ + 
Sbjct: 175 KIKWELEDLSLRYLDPENYYQLVEMVNK--RRHEREA------LISKITLEIEKNLNKIG 226

Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
           +  +I    K  YSIYK +     + +E+  ++ +R+            L    + CY V
Sbjct: 227 IHADIHGRPKNFYSIYKKMKIKGKAFDEIYDLSAVRV------------LVDDIKDCYGV 274

Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAER 488
           LG+VH +W PIP   KDYIA PKPN YQSLHTT+I    E+    EVQIRT EM   AE 
Sbjct: 275 LGVVHTLWKPIPGRFKDYIAMPKPNKYQSLHTTVIDNNGET---FEVQIRTFEMHQTAEY 331

Query: 489 GIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMT 548
           GIAAH+  +  V+               K+   +       ++WL  + EWQ++      
Sbjct: 332 GIAAHWKYKAGVS---------------KSTSFDE-----NLTWLRQLLEWQKDL---ND 368

Query: 549 SREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLV 608
             +F++T+  D     VF+FTPRG++ NLP+G+T +D+AY IH+ +GNK   AK+NG +V
Sbjct: 369 PNDFMETLKIDFFADEVFIFTPRGDVINLPEGSTPIDFAYRIHSAVGNKCTGAKINGRIV 428

Query: 609 SPTHVLANAEVVEIIT 624
              + L + ++V++IT
Sbjct: 429 PLNYKLKSGDIVDVIT 444


>gi|365157987|ref|ZP_09354230.1| GTP pyrophosphokinase [Bacillus smithii 7_3_47FAA]
 gi|363622166|gb|EHL73337.1| GTP pyrophosphokinase [Bacillus smithii 7_3_47FAA]
          Length = 730

 Score =  343 bits (881), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 202/491 (41%), Positives = 295/491 (60%), Gaps = 50/491 (10%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
            YL+   + LV +A  +A EAH  Q R+SGEP+I+HPV+VA IL +LE+D  ++AAG LH
Sbjct: 18  QYLNEEHVALVYKAYRVAEEAHKHQYRKSGEPYIMHPVQVAGILADLEMDPATVAAGFLH 77

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT + T E ++ EF   +  +V+G   V+KLGK+K K    S ++ +A++ R+MFL
Sbjct: 78  DVVEDTEM-TLEDLKREFNEEIAMLVDG---VTKLGKIKYK----SHEEQQAENHRKMFL 129

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM +++RVI++KLADRLHNMRTL H+P  KQ  IA ETL++FAPLA  LG+ +IK ELE+
Sbjct: 130 AMAQDIRVILIKLADRLHNMRTLKHLPAEKQRRIANETLEIFAPLAHRLGISKIKWELED 189

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
            +  Y N + Y     R+ +L K   K  E    +     E  + L  ++++ EI    K
Sbjct: 190 TALRYLNPQQYY----RIVNLMK--RKRAEREEYLEEVVEEVRERLKEVSIEAEISGRPK 243

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIY+ ++      NE+  +  +RI            L +  + CY VLG++H  W P
Sbjct: 244 HIYSIYRKMVIKNKQFNEIYDLLAVRI------------LVNSIKDCYAVLGIIHTCWKP 291

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PKPN YQSLHTT+I    +    LEVQIRT +M  IAE G+AAH++ + 
Sbjct: 292 MPGRFKDYIAMPKPNMYQSLHTTVIGPKGDP---LEVQIRTFDMHRIAEYGVAAHWAYK- 347

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                            GKT+   N++   ++SW   I E+Q+E   +  + EF++++  
Sbjct: 348 ----------------EGKTLD-ENSSFEKKLSWFREILEFQKE---SANAEEFMESLKI 387

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           DL    VFVFTP+G++  LP G+  +D+AY IH+EIGNK + AKVNG +V+  + L   +
Sbjct: 388 DLFSDMVFVFTPKGDVIELPSGSVPIDFAYRIHSEIGNKTIGAKVNGKMVTLDYKLKTGD 447

Query: 619 VVEIITYNVSF 629
           +VEI+T   S+
Sbjct: 448 IVEILTSKHSY 458


>gi|366085882|ref|ZP_09452367.1| GTP pyrophosphokinase [Lactobacillus zeae KCTC 3804]
          Length = 741

 Score =  343 bits (881), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 196/486 (40%), Positives = 285/486 (58%), Gaps = 49/486 (10%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           +Y++P  L  V +A   A   H  Q R+SGEP+IIHP++VA IL EL++D E++A+G LH
Sbjct: 18  AYMNPEHLAFVEKAYKFAAYVHKDQVRKSGEPYIIHPIQVAGILAELKMDPETVASGYLH 77

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDTN+ T   IEE FG  V  IV+G TK+SK+  +  K+E        A++ R+M L
Sbjct: 78  DVVEDTNI-TLGDIEEVFGHDVAVIVDGVTKLSKVTYVAHKDE-------LAENHRKMLL 129

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM +++RVI+VKLADRLHNMRTL H+ P KQ  IA ETL+++APLA  LG+  IK ELE+
Sbjct: 130 AMAKDLRVIMVKLADRLHNMRTLQHLRPDKQRRIANETLEIYAPLADRLGISTIKWELED 189

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
           LS  Y N + Y ++   +     E E  ++EA + + K + D      + +K EI    K
Sbjct: 190 LSLRYLNPQQYYRIAHLMNSKRTEREAYIQEAIEEIKKALAD------LHIKYEIYGRPK 243

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIYK +       +E+  +  +R+I                + CY VLG +H  W P
Sbjct: 244 HIYSIYKKMRDKHKQFDELYDLLAIRVI------------TETIKDCYAVLGAIHTKWKP 291

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PK N YQS+HTT+I  + +    LEVQIRTEEM  +AE G+AAH++ + 
Sbjct: 292 MPGRFKDYIAMPKANLYQSIHTTVIGPMGKP---LEVQIRTEEMHHVAEYGVAAHWAYK- 347

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                            G+T  +       ++     I E Q+E   +  + +F++++  
Sbjct: 348 ----------------EGQTSKVQYDKAGKKLDIFREIFELQDE---SSDAADFMESVKG 388

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           D+   RV+VFTP+G++  LPKG+  +D+ Y+IHTE+GN  V AKVNG +V   +VL N +
Sbjct: 389 DIFTDRVYVFTPKGDVYELPKGSNPLDFGYLIHTEVGNHTVGAKVNGKIVPLNYVLKNGD 448

Query: 619 VVEIIT 624
           +VE++T
Sbjct: 449 IVEMLT 454


>gi|452850965|ref|YP_007492649.1| GTP pyrophosphokinase [Desulfovibrio piezophilus]
 gi|451894619|emb|CCH47498.1| GTP pyrophosphokinase [Desulfovibrio piezophilus]
          Length = 724

 Score =  343 bits (881), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 199/486 (40%), Positives = 291/486 (59%), Gaps = 45/486 (9%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           SY+   +L+L++RA + + +AHDG  RRSGEP+I HP+ VA +L +++LD  ++AAGLLH
Sbjct: 13  SYIDHPDLDLIQRAYVFSAQAHDGVVRRSGEPYISHPMNVANLLADMQLDEATVAAGLLH 72

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           DTVEDT+  T + IEE FG+ V  IV+G TK+SK+       E+ +VQ  +A+++R++ L
Sbjct: 73  DTVEDTDT-TVDEIEELFGSDVADIVDGVTKISKM-----DFESKAVQ--QAENIRKLIL 124

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM E++RV++VKLADRLHNMRTL +M P KQ  IA ET  ++APLA  LG++++K+ELE+
Sbjct: 125 AMAEDIRVLMVKLADRLHNMRTLQYMKPVKQRLIAQETQDIYAPLANRLGLHRVKTELED 184

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
           L   Y   +    V  ++ D   EH    E     ++  I++   L+   +K  +    K
Sbjct: 185 LCLRYLKPD----VFEQLTDAVSEHRAAGEPYIDKVIDLIQN--MLNKNKIKGRVYGRTK 238

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             +SI+  + +   + +E+  +   RII+               + CY VLGL+H  W P
Sbjct: 239 HFHSIHVKMEQQGLTFDEIYDLIAFRIIV------------DSLKDCYSVLGLIHAAWRP 286

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYI+ PK N YQSLH+T+I    E   R+EVQIRT+EM+ IAE G+AAH+  + 
Sbjct: 287 VPGRFKDYISIPKANMYQSLHSTVIGPDGE---RIEVQIRTDEMNQIAEYGVAAHWQYKE 343

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
              G+           +GKT    +A    R +WL  I +WQ E       REF+ ++  
Sbjct: 344 VGKGI----------KKGKTAGTRDAE---RYTWLKQIMDWQREL---SDPREFMSSLRL 387

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           ++    V+VFTP G+IK LP GAT VD+AY IH+E+G+    AKVNG +V     L N +
Sbjct: 388 EMFQDEVYVFTPNGDIKELPDGATPVDFAYAIHSEVGDICAGAKVNGRIVPLHSTLQNGD 447

Query: 619 VVEIIT 624
            VEIIT
Sbjct: 448 SVEIIT 453


>gi|52081239|ref|YP_080030.1| GTP pyrophosphokinase [Bacillus licheniformis DSM 13 = ATCC 14580]
 gi|319644794|ref|ZP_07999027.1| GTP pyrophosphokinase [Bacillus sp. BT1B_CT2]
 gi|404490119|ref|YP_006714225.1| GTP pyrophosphokinase RelA [Bacillus licheniformis DSM 13 = ATCC
           14580]
 gi|423683219|ref|ZP_17658058.1| GTP pyrophosphokinase [Bacillus licheniformis WX-02]
 gi|52004450|gb|AAU24392.1| GTP pyrophosphokinase [Bacillus licheniformis DSM 13 = ATCC 14580]
 gi|52349121|gb|AAU41755.1| GTP pyrophosphokinase RelA [Bacillus licheniformis DSM 13 = ATCC
           14580]
 gi|317392603|gb|EFV73397.1| GTP pyrophosphokinase [Bacillus sp. BT1B_CT2]
 gi|383439993|gb|EID47768.1| GTP pyrophosphokinase [Bacillus licheniformis WX-02]
          Length = 733

 Score =  343 bits (881), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 197/491 (40%), Positives = 291/491 (59%), Gaps = 50/491 (10%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           SYLS   +  +++A   A +AH  Q R+SGEP+IIHP++VA IL +LE+D  +IA G LH
Sbjct: 18  SYLSDEHVAFIKKAYQYAEDAHREQYRKSGEPYIIHPIQVAGILVDLEMDPATIAGGFLH 77

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT+V T E ++E F   V  +V+G   V+KLGK+K K    S ++ +A++ R+MF+
Sbjct: 78  DVVEDTSV-TLEDLKEAFNEEVAMLVDG---VTKLGKIKYK----SQEEQQAENHRKMFV 129

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM +++RVI++KLADRLHNMRTL H+P  KQ  I+ ETL++FAPLA  LG+ +IK ELE+
Sbjct: 130 AMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRISNETLEIFAPLAHRLGISKIKWELED 189

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
            +  Y N + Y ++   +     E E  +EE    +  ++E+      + +K +     K
Sbjct: 190 TALRYLNPQQYYRIVNLMKKKRAERELYVEEVVNEVKSRVEE------VNIKADFSGRPK 243

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIY+ +       NE+  +  +RI            L +  + CY VLG++H  W P
Sbjct: 244 HIYSIYRKMAMQNKQFNEIYDLLAVRI------------LVNSIKDCYAVLGIIHTCWKP 291

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PKPN YQSLHTT+I    +    LEVQIRT EM  IAE GIAAH++ + 
Sbjct: 292 MPGRFKDYIAMPKPNMYQSLHTTVIGPKGDP---LEVQIRTFEMHEIAEYGIAAHWAYK- 347

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                            GK     +++   ++SW   I E+Q E   +  + EF++++  
Sbjct: 348 ----------------EGKNAN-EDSSFDKKLSWFREILEFQNE---SSDAEEFMESLKI 387

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           DL    VFVFTP+G++  LP G+  +D++Y IH+EIGNK + AKVNG +V+  + L   +
Sbjct: 388 DLFSDMVFVFTPKGDVIELPSGSVPIDFSYRIHSEIGNKTIGAKVNGKMVTLDYKLRTGD 447

Query: 619 VVEIITYNVSF 629
           +VEI+T   S+
Sbjct: 448 IVEILTSKHSY 458


>gi|317128220|ref|YP_004094502.1| (p)ppGpp synthetase I SpoT/RelA [Bacillus cellulosilyticus DSM
           2522]
 gi|315473168|gb|ADU29771.1| (p)ppGpp synthetase I, SpoT/RelA [Bacillus cellulosilyticus DSM
           2522]
          Length = 726

 Score =  343 bits (881), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 199/491 (40%), Positives = 292/491 (59%), Gaps = 50/491 (10%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           YL  N++  ++ A  +A  AH  Q R+SGEP+I HPV+VA IL +L +D ++IAA  LHD
Sbjct: 13  YLLENDVAFIKEAYEVAEVAHKEQFRKSGEPYIWHPVQVAGILVDLGMDPKTIAAAFLHD 72

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            VEDT+V   E +   FG  V  +V+G   V+KLGK+K K    S ++ +A++ R+MF+A
Sbjct: 73  VVEDTDV-KLEDLANRFGNEVAMLVDG---VTKLGKIKYK----SKEEQQAENHRKMFVA 124

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M +++RVI++KLADRLHNMRTL H+PP KQ  IA ETL++FAPLA  LG+ +IK ELE+ 
Sbjct: 125 MAKDIRVILIKLADRLHNMRTLKHLPPEKQRRIANETLEIFAPLAHRLGISKIKWELEDT 184

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           S  Y N + Y     R+ +L K+   E E+    +  KI   + L+ + V+  I    K 
Sbjct: 185 SLRYLNPQQYY----RIVNLMKKKRAEREDYIDEVQNKIR--ERLEGVGVQAGIHGRAKH 238

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIY+ +       NE+  +  +RII+            +  + CY VLG++H  W P+
Sbjct: 239 IYSIYRKMALQNKQFNEIYDLLAVRIIV------------NSIKDCYAVLGIIHTQWKPM 286

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK N YQSLHTT+I    +    LEVQIR+E+M  +AE G+AAH++ +  
Sbjct: 287 PGRFKDYIAMPKANMYQSLHTTVIGPKGDP---LEVQIRSEDMHKVAEFGVAAHWAYK-- 341

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
                           GKT+   N  +  ++SW   I EWQ +      ++EF++++  D
Sbjct: 342 ---------------EGKTMK-QNETLETKMSWFREILEWQND---TNDAQEFMESLKID 382

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           L    VFVFTP+G++  LPKG+  +D+A+ IHTE+GN+ + AKVNG +V   H L   ++
Sbjct: 383 LFSDMVFVFTPKGDVIELPKGSVPLDFAFRIHTEVGNRCIGAKVNGKMVPLDHPLQTGDI 442

Query: 620 VEIITYNVSFS 630
           VE++T   S+ 
Sbjct: 443 VEVLTSKHSYG 453


>gi|308272039|emb|CBX28647.1| GTP pyrophosphokinase [uncultured Desulfobacterium sp.]
          Length = 713

 Score =  343 bits (880), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 195/480 (40%), Positives = 289/480 (60%), Gaps = 52/480 (10%)

Query: 145 ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDT 204
           +++++ RA + +   HDGQ R SGEP++ HP+EVA IL E++LD  SIAAGLLHD +EDT
Sbjct: 19  DIDIIDRAYVYSARVHDGQVRLSGEPYLSHPLEVAGILAEMKLDVISIAAGLLHDVIEDT 78

Query: 205 NVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEV 264
           +  T E I+E FG  V  IV G TK+SK+      +++H  +   A+ +R+M LAM +++
Sbjct: 79  HA-TSEEIKEIFGENVLHIVSGVTKLSKI----PFSDSHVRE---AESIRKMLLAMADDI 130

Query: 265 RVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYT 324
           RV+++KLADRLHNMRTL +    K+  IA ETL ++ P+A  LG+Y IK ELEN++FM  
Sbjct: 131 RVVLIKLADRLHNMRTLQYQTEEKRKKIAQETLDIYTPIAARLGIYWIKQELENIAFMNI 190

Query: 325 NAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIY 384
             ++Y+ +++ V+   ++ EK +E   + + K ++++       +K E+    K  YSIY
Sbjct: 191 FPDEYSNIEKLVSKDKEDREKYVETVKEYIRKTMDEN------NIKCEVLGRYKNYYSIY 244

Query: 385 KAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMK 444
           + ++    + +++  I   RII+   P             CY  LGLVH +W PI    K
Sbjct: 245 QKMVNQNLTFDQIYDIIAFRIILDSVPQ------------CYEALGLVHALWKPIAHKFK 292

Query: 445 DYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLV 504
           DYI  PKPN YQSLHTT+I  + E   R+E+QIRT EMD IA  GIAAH+S +       
Sbjct: 293 DYIGFPKPNMYQSLHTTVIGPIGE---RIEIQIRTWEMDGIARSGIAAHWSYK------- 342

Query: 505 GHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSR 564
                      GK +   + NI+ + SW+  + +  +E        EF++ +  DL    
Sbjct: 343 ----------EGKRI---DENISKKFSWIQNLVDNHKE---TKDPVEFLENVRIDLYPDE 386

Query: 565 VFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
           V+VFTP+G IK+LPKGAT VD+AY+IHTE+GN+   AKVNG +V  ++ L    +V+IIT
Sbjct: 387 VYVFTPKGAIKSLPKGATPVDFAYLIHTEVGNQCSGAKVNGRMVPLSYELQTGNIVDIIT 446


>gi|188585914|ref|YP_001917459.1| (p)ppGpp synthetase I SpoT/RelA [Natranaerobius thermophilus
           JW/NM-WN-LF]
 gi|179350601|gb|ACB84871.1| (p)ppGpp synthetase I, SpoT/RelA [Natranaerobius thermophilus
           JW/NM-WN-LF]
          Length = 729

 Score =  343 bits (880), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 199/499 (39%), Positives = 291/499 (58%), Gaps = 55/499 (11%)

Query: 128 ERLWEDLRPTISYLSP--NELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGEL 185
           E+L+  L+  I    P   +LE + RA   A   H+ QKR SGE +I+HP+EVA +L +L
Sbjct: 5   EQLFFSLKEKIKSYYPLDTDLEQLDRAFEFARSYHNDQKRVSGEEYIVHPIEVALVLADL 64

Query: 186 ELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSV 245
           ELD ++I+AGLLHD +EDT   T E +EE FG  +  +V+G TK+S+L   K K E+   
Sbjct: 65  ELDLDTISAGLLHDVMEDTPA-TREELEELFGDEITLLVDGVTKLSRLN-FKTKEEH--- 119

Query: 246 QDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAK 305
              +A++LR+MF AM  ++RVI++KLADR HNMRTL+++P  KQ  IA ET++++APLA 
Sbjct: 120 ---QAENLRKMFFAMANDIRVILIKLADRTHNMRTLNYLPERKQKEIAKETMEIYAPLAN 176

Query: 306 LLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLD 365
            LG+Y+IK ELE+L+F Y   E Y  +  R+     E E+ +++    L  K+++     
Sbjct: 177 RLGIYKIKWELEDLAFRYIEPEQYYYLADRIVQKRMEREEYIKKIKVDLRDKLKE----- 231

Query: 366 LMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQIC 425
            M +  EI    K  YSIY  + K+   +NE+  +  LRII+            +  + C
Sbjct: 232 -MGIDGEIHGRPKHLYSIYSKMKKTGKDLNEIYDLIALRIIV------------NNVKDC 278

Query: 426 YHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLI 485
           Y VLG VH +W P+P   KDYIA PK N YQSLHTT+   L      +E+QIRT +M   
Sbjct: 279 YAVLGTVHTMWKPVPGRFKDYIAVPKSNMYQSLHTTV---LCPQGNLVEIQIRTWDMHKT 335

Query: 486 AERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVG 545
           AE GIAAH+  +                        ++   A ++SW   + EWQ+E   
Sbjct: 336 AEYGIAAHWKYK---------------------ENTDDKKFAEKVSWFRQLLEWQQE--- 371

Query: 546 NMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNG 605
              + EF++ +  DL    VFVFTP+G++ +LP G+T +D+AY IHT+IGN  + AK++G
Sbjct: 372 TSDALEFMEHLKVDLFSDEVFVFTPKGDVIDLPSGSTPIDFAYRIHTDIGNTCIGAKISG 431

Query: 606 NLVSPTHVLANAEVVEIIT 624
            +VS  + L   +VVEI+T
Sbjct: 432 RMVSLDYQLQTGDVVEILT 450


>gi|308174461|ref|YP_003921166.1| GTP pyrophosphokinase [Bacillus amyloliquefaciens DSM 7]
 gi|307607325|emb|CBI43696.1| GTP pyrophosphokinase (RelA/SpoT) [Bacillus amyloliquefaciens DSM
           7]
          Length = 734

 Score =  343 bits (880), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 196/491 (39%), Positives = 291/491 (59%), Gaps = 50/491 (10%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           +YL   ++  V +A + A +AH  Q R+SGEP+IIHP++VA IL +LE+D  +IA G LH
Sbjct: 18  TYLPEEQIAFVEKAYLYAQDAHREQYRKSGEPYIIHPIQVAGILVDLEMDPSTIAGGFLH 77

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT+V T + ++E F   V  +V+G   V+KLGK+K K    S ++ +A++ R+MF+
Sbjct: 78  DVVEDTDV-TLDDLKEAFSEEVAMLVDG---VTKLGKIKYK----SQEEQQAENHRKMFV 129

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM +++RVI++KLADRLHNMRTL H+P  KQ  I+ ETL++FAPLA  LG+ +IK ELE+
Sbjct: 130 AMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRISNETLEIFAPLAHRLGISKIKWELED 189

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
            +  Y N + Y ++   +     E E  ++E    + K++E+      + +K +     K
Sbjct: 190 TALRYLNPQQYYRIVNLMKKKRAERELYVDEVVNEVKKRVEE------VNIKADFSGRPK 243

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIY+ +       NE+  +  +RI+        VG +      CY VLG++H  W P
Sbjct: 244 HIYSIYRKMALQNKQFNEIYDLLAVRIL--------VGSIKD----CYAVLGIIHTCWKP 291

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PKPN YQSLHTT+I    +    LEVQIRT EM  IAE G+AAH+    
Sbjct: 292 MPGRFKDYIAMPKPNMYQSLHTTVIGPKGDP---LEVQIRTFEMHEIAEYGVAAHW---- 344

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                   A   G++          A    ++SW   I E+Q E   +  + EF++++  
Sbjct: 345 --------AYKEGKAAN------EEATFEKKLSWFREILEFQNE---STDAEEFMESLKI 387

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           DL    V+VFTP+G++  LP G+  +D++Y IH+EIGNK + AKVNG +V+  H L   +
Sbjct: 388 DLFSDMVYVFTPKGDVIELPSGSVPIDFSYRIHSEIGNKTIGAKVNGKMVTLDHKLRTGD 447

Query: 619 VVEIITYNVSF 629
           +VEI+T   S+
Sbjct: 448 IVEIVTSKHSY 458


>gi|312898881|ref|ZP_07758269.1| GTP diphosphokinase [Megasphaera micronuciformis F0359]
 gi|310620043|gb|EFQ03615.1| GTP diphosphokinase [Megasphaera micronuciformis F0359]
          Length = 732

 Score =  343 bits (880), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 197/502 (39%), Positives = 294/502 (58%), Gaps = 54/502 (10%)

Query: 123 KEDSPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARIL 182
           KE++  RL E ++   SY      E +R+A  LA EAH  QKR +G+P+I+HP+ VA IL
Sbjct: 6   KEEAYNRLIEIIK---SYQPDETCENIRKAYELADEAHKEQKRVNGDPYILHPLAVAEIL 62

Query: 183 GELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNEN 242
            ++E+D  +I A LLHD VEDT  +  E IE  FG  V  +V+G TK+++L       + 
Sbjct: 63  ADMEIDTTTITASLLHDVVEDTEYM-LEDIERIFGKEVAFLVDGVTKLNRL-------DY 114

Query: 243 HSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAP 302
            + +D + + +R+MFLAM +++RV+++KLADRLHNMRTL +M   KQ  IA ETL+++AP
Sbjct: 115 RTKEDQQVNSMRKMFLAMAKDIRVVVIKLADRLHNMRTLKYMRSEKQKRIAQETLEIYAP 174

Query: 303 LAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQ 362
           LA  LG++ IK ELE+LSF Y   + Y  +  ++ +  K  E+ + EA  +L K + +  
Sbjct: 175 LAHRLGIFNIKWELEDLSFRYMEPDKYYDLVDQMKEKRKVREEIVNEAIDVLKKTLTES- 233

Query: 363 FLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQ 422
                ++  EI    K  YSIYK + K    ++++  +  +R+I+               
Sbjct: 234 -----SISFEINGRPKHFYSIYKKMKKDNRDLSQIYDLYAIRVIV------------DTV 276

Query: 423 QICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEM 482
           Q CY VLG+VH +W P+P   KDYIA PKPN YQSLHTT+I    +    +E+QIRT +M
Sbjct: 277 QDCYGVLGIVHSLWKPLPYRFKDYIAMPKPNNYQSLHTTVIGTRGQP---VEIQIRTWDM 333

Query: 483 DLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEE 542
             IAE G+AAH+  +             GR+ +  T          ++ WL  + EWQ+ 
Sbjct: 334 HHIAEYGVAAHWRYK------------EGRASQKAT------GFDEKMGWLRNMLEWQD- 374

Query: 543 FVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAK 602
                  +EFV+ +  D     VFVFTPRG++ +LP+GA  +D+AY IHT++G++ V AK
Sbjct: 375 ---TSNPQEFVNALKLDAFSDEVFVFTPRGDVIDLPQGAIPIDFAYRIHTDVGHRCVGAK 431

Query: 603 VNGNLVSPTHVLANAEVVEIIT 624
           VNG +V   + L N ++VE+IT
Sbjct: 432 VNGKIVPLDYALKNGDIVEVIT 453


>gi|395244306|ref|ZP_10421275.1| GTP diphosphokinase [Lactobacillus hominis CRBIP 24.179]
 gi|394483401|emb|CCI82283.1| GTP diphosphokinase [Lactobacillus hominis CRBIP 24.179]
          Length = 748

 Score =  343 bits (880), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 199/485 (41%), Positives = 285/485 (58%), Gaps = 47/485 (9%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++ +++  V  A   A +AH+GQ R SG+P+IIHP +VA  L  L+LD +++AAG LHD
Sbjct: 19  YMNDDDIAFVESAYEFARKAHEGQFRVSGQPYIIHPTQVAGTLATLKLDPDTVAAGYLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
           TVEDT  VT E I+E+FG  V  IV+G   V+KL K++ K++ H  ++  AD+ R+M +A
Sbjct: 79  TVEDT-PVTNEDIKEKFGKDVAFIVDG---VTKLSKIQYKSKTH--EEYLADNHRKMLIA 132

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M +++RVI+VKLADRLHNM TL H+ P KQ  IA ETL ++APLA  LG+  IK ELE++
Sbjct: 133 MAKDLRVIMVKLADRLHNMHTLDHLRPDKQRRIADETLDIYAPLADRLGIGTIKWELEDM 192

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           S  Y N E Y ++   +     E E  + +A +IL       Q LD + +  EI    K 
Sbjct: 193 SLHYLNPEQYYRIVNLMQSKRSEREGYIADAIQILR------QTLDSLHIDYEIYGRPKH 246

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIYK ++      +E+  +  +R+I+K              + CY VLG VH  W P+
Sbjct: 247 IYSIYKKMVNKHKDFSEIYDLLAVRVIVK------------SVRDCYAVLGAVHTKWKPM 294

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK NGYQSLHTT+I         LE+QIRTE M  +AE G+AAH++ +  
Sbjct: 295 PGRFKDYIAVPKSNGYQSLHTTIIG---PGGKPLEIQIRTEAMHQVAEYGVAAHWAYKEG 351

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
           V G V     N                  +++    I E Q+E      S EF+ ++  D
Sbjct: 352 VKGEVEQTEANK-----------------KLNMFQEILELQDE---TKDSHEFMKSVKTD 391

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           +   RV+VFTP+G++  LPKG+  +D+AYMIH+E+G   V A++NG +V   + L N +V
Sbjct: 392 IFSDRVYVFTPKGDVYELPKGSVPLDFAYMIHSEVGAHSVGARINGKIVPLDYKLKNGDV 451

Query: 620 VEIIT 624
           VE++T
Sbjct: 452 VEMLT 456


>gi|154686901|ref|YP_001422062.1| RelA [Bacillus amyloliquefaciens FZB42]
 gi|375363176|ref|YP_005131215.1| GTP pyrophosphokinase [Bacillus amyloliquefaciens subsp. plantarum
           CAU B946]
 gi|384266310|ref|YP_005422017.1| GTP pyrophosphokinase [Bacillus amyloliquefaciens subsp. plantarum
           YAU B9601-Y2]
 gi|385265645|ref|ZP_10043732.1| GTP diphosphokinase [Bacillus sp. 5B6]
 gi|387899344|ref|YP_006329640.1| GTP pyrophosphokinase [Bacillus amyloliquefaciens Y2]
 gi|394991954|ref|ZP_10384748.1| RelA [Bacillus sp. 916]
 gi|421730833|ref|ZP_16169959.1| GTP pyrophosphokinase [Bacillus amyloliquefaciens subsp. plantarum
           M27]
 gi|429506052|ref|YP_007187236.1| GTP pyrophosphokinase [Bacillus amyloliquefaciens subsp. plantarum
           AS43.3]
 gi|451346089|ref|YP_007444720.1| GTP pyrophosphokinase [Bacillus amyloliquefaciens IT-45]
 gi|452856418|ref|YP_007498101.1| GTP pyrophosphokinase (RelA/SpoT) [Bacillus amyloliquefaciens
           subsp. plantarum UCMB5036]
 gi|154352752|gb|ABS74831.1| RelA [Bacillus amyloliquefaciens FZB42]
 gi|371569170|emb|CCF06020.1| GTP pyrophosphokinase [Bacillus amyloliquefaciens subsp. plantarum
           CAU B946]
 gi|380499663|emb|CCG50701.1| GTP pyrophosphokinase [Bacillus amyloliquefaciens subsp. plantarum
           YAU B9601-Y2]
 gi|385150141|gb|EIF14078.1| GTP diphosphokinase [Bacillus sp. 5B6]
 gi|387173454|gb|AFJ62915.1| GTP pyrophosphokinase [Bacillus amyloliquefaciens Y2]
 gi|393807166|gb|EJD68491.1| RelA [Bacillus sp. 916]
 gi|407074987|gb|EKE47974.1| GTP pyrophosphokinase [Bacillus amyloliquefaciens subsp. plantarum
           M27]
 gi|429487642|gb|AFZ91566.1| GTP pyrophosphokinase [Bacillus amyloliquefaciens subsp. plantarum
           AS43.3]
 gi|449849847|gb|AGF26839.1| GTP pyrophosphokinase [Bacillus amyloliquefaciens IT-45]
 gi|452080678|emb|CCP22443.1| GTP pyrophosphokinase (RelA/SpoT) [Bacillus amyloliquefaciens
           subsp. plantarum UCMB5036]
          Length = 734

 Score =  343 bits (880), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 197/491 (40%), Positives = 290/491 (59%), Gaps = 50/491 (10%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           +YL   ++  V +A + A  AH  Q R+SGEP+IIHP++VA IL +LE+D  +IA G LH
Sbjct: 18  TYLPEEQIAFVEKAYLYAQNAHREQYRKSGEPYIIHPIQVAGILVDLEMDPSTIAGGFLH 77

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT+V T + ++E F   V  +V+G   V+KLGK+K K    S ++ +A++ R+MF+
Sbjct: 78  DVVEDTDV-TLDDLKEAFSEEVAMLVDG---VTKLGKIKYK----SQEEQQAENHRKMFV 129

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM +++RVI++KLADRLHNMRTL H+P  KQ  I+ ETL++FAPLA  LG+ +IK ELE+
Sbjct: 130 AMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRISNETLEIFAPLAHRLGISKIKWELED 189

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
            +  Y N + Y ++   +     E E  +EE    + K++E+      + +K +     K
Sbjct: 190 TALRYLNPQQYYRIVNLMKKKRAERELYVEEVVNEVKKRVEE------VNIKADFSGRPK 243

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIY+ +       NE+  +  +RI+        VG +      CY VLG++H  W P
Sbjct: 244 HIYSIYRKMALQNKQFNEIYDLLAVRIL--------VGSIKD----CYAVLGIIHTCWKP 291

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PKPN YQSLHTT+I    +    LEVQIRT EM  IAE G+AAH++ + 
Sbjct: 292 MPGRFKDYIAMPKPNMYQSLHTTVIGPKGDP---LEVQIRTFEMHEIAEYGVAAHWAYK- 347

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                            GK      A    ++SW   I E+Q E   +  + EF++++  
Sbjct: 348 ----------------EGKAAN-EEATFEKKLSWFREILEFQNE---STDAEEFMESLKI 387

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           DL    V+VFTP+G++  LP G+  +D++Y IH+EIGNK + AKVNG +V+  H L   +
Sbjct: 388 DLFSDMVYVFTPKGDVIELPSGSVPIDFSYRIHSEIGNKTIGAKVNGKMVTLDHKLRTGD 447

Query: 619 VVEIITYNVSF 629
           +VEI+T   S+
Sbjct: 448 IVEILTSKHSY 458


>gi|336437345|ref|ZP_08617051.1| hypothetical protein HMPREF0988_02636 [Lachnospiraceae bacterium
           1_4_56FAA]
 gi|336005471|gb|EGN35516.1| hypothetical protein HMPREF0988_02636 [Lachnospiraceae bacterium
           1_4_56FAA]
          Length = 767

 Score =  343 bits (880), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 205/507 (40%), Positives = 298/507 (58%), Gaps = 61/507 (12%)

Query: 126 SPERLWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
            PE+L++ L   +    P+ ++ L+ +A   A EAH+GQ R+SGEP+IIHP+ V  IL +
Sbjct: 30  DPEQLYQALIERVRKYHPSADISLIEKAYKTANEAHNGQVRKSGEPYIIHPLWVGIILAD 89

Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
           LE+D E+I AG+LHD VEDT++ T + +  EFG  V  +V+G   V+KLG+L    +   
Sbjct: 90  LEMDKETIVAGMLHDAVEDTDM-TLDDVSREFGEEVALLVDG---VTKLGQLSYSQDKLE 145

Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
           +Q   A++LR+MFLAM +++RVII+KLADRLHNMRTL  M P KQ   A ET+ ++AP+A
Sbjct: 146 IQ---AENLRKMFLAMAKDIRVIIIKLADRLHNMRTLEFMRPEKQKEKAKETMDIYAPIA 202

Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
           + LG+ +IK EL++LS  Y+  E Y ++   V DL +   K  E   +I+    E    +
Sbjct: 203 QRLGISKIKIELDDLSLKYSQPEVYQQL---VHDLNERKTKREEFVQQIVS---EVSTHM 256

Query: 365 DLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
               ++ ++    K  +SIYK ++    ++++V  +  +RII+               + 
Sbjct: 257 KNAHIQAKVYGRVKHFFSIYKKMVNQNKTLDQVYDLFAVRIIV------------DSVKD 304

Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRT 479
           CY  LG++H ++TPIP   KDYIA PKPN YQSLHTTL+     PF        E+QIRT
Sbjct: 305 CYAALGVIHEMYTPIPGRFKDYIAMPKPNMYQSLHTTLMGPSGQPF--------EIQIRT 356

Query: 480 EEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREW 539
           EEM   AE GIAAH+    +  G  G A         K V         +++WL  I EW
Sbjct: 357 EEMHKTAEYGIAAHWK---YKEG--GDA--------AKVVQAQEE----KLNWLRQILEW 399

Query: 540 QEEFVGNMTSREFVDTITRDL--LGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNK 597
           Q +   N   REF+  +  DL      V+ FTP G++KNLP G+T VD+AY IH+ +GNK
Sbjct: 400 QRDMSDN---REFLSLLKGDLDLFAEDVYCFTPNGDVKNLPNGSTPVDFAYAIHSAVGNK 456

Query: 598 MVAAKVNGNLVSPTHVLANAEVVEIIT 624
           MV A+VNG LV+  + + N + +EI+T
Sbjct: 457 MVGARVNGKLVNIDYKIQNGDRIEILT 483


>gi|392988581|ref|YP_006487174.1| GTP pyrophosphokinase [Enterococcus hirae ATCC 9790]
 gi|392336001|gb|AFM70283.1| GTP pyrophosphokinase [Enterococcus hirae ATCC 9790]
          Length = 737

 Score =  343 bits (880), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 194/493 (39%), Positives = 291/493 (59%), Gaps = 51/493 (10%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
            Y+ P+ +  V++A   A  AHDGQ R+SGEP+IIHP++VA IL +L +D  ++A G LH
Sbjct: 18  QYMGPDHVAFVQKACDYATAAHDGQFRKSGEPYIIHPIQVAGILADLRMDPHTVATGFLH 77

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT+V T + ++EEFG  V  +V+G   V+KLGK+K K+    +    A++ R+M L
Sbjct: 78  DVVEDTDV-TLDDLKEEFGPDVAMLVDG---VTKLGKIKYKSHEEQL----AENHRKMLL 129

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM +++RVI+VKLADRLHNMRTL H+   KQ  IA ETL+++APLA  LG+ +IK ELE+
Sbjct: 130 AMAQDLRVIMVKLADRLHNMRTLKHLREDKQRRIAQETLEIYAPLAHRLGISRIKWELED 189

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQF-LDLMTVKTEIRSVC 377
            +  Y N + Y ++   +       + + EE  K +   +ED +   + + +  EI    
Sbjct: 190 TALRYLNPKQYYRIVHLM-------QTKREEREKYVNATVEDIRLATEELDIYAEIYGRP 242

Query: 378 KEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWT 437
           K  YSIY+ +   +   NE+  +  +R+I+               + CY VLG +H  W 
Sbjct: 243 KHIYSIYRKMKDQKKQFNEIYDLLAIRVIV------------DSIKDCYAVLGAIHTKWK 290

Query: 438 PIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGR 497
           P+P   KDYIA PK N YQSLHTT+I     +   +E+QIRT+EM  IAE G+AAH++  
Sbjct: 291 PMPGRFKDYIAMPKANMYQSLHTTVIG---PAGNPVEIQIRTQEMHEIAEFGVAAHWA-- 345

Query: 498 VFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTIT 557
            +  G      P+G              I  ++SW + I E Q+E   +  + EF++ + 
Sbjct: 346 -YKEGKNDKVEPDG--------------ITKQLSWFHEIIELQDE---SYDASEFMEGVK 387

Query: 558 RDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANA 617
            D+   +V+VFTP+G++  LPKG+  +D+AY IHT+IGNK   AK+NG +V   + L N 
Sbjct: 388 GDIFSDKVYVFTPKGDVTELPKGSGPLDFAYSIHTDIGNKTTGAKINGKMVQLDYKLKNG 447

Query: 618 EVVEIITYNVSFS 630
           +++EI+T   SF 
Sbjct: 448 DIIEILTSPNSFG 460


>gi|89100794|ref|ZP_01173647.1| GTP pyrophosphokinase [Bacillus sp. NRRL B-14911]
 gi|89084497|gb|EAR63645.1| GTP pyrophosphokinase [Bacillus sp. NRRL B-14911]
          Length = 731

 Score =  343 bits (880), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 198/493 (40%), Positives = 291/493 (59%), Gaps = 50/493 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YL+     +VR+A   A  AH  Q R+SGEP+IIHP++VA IL +LE+D  ++AAG 
Sbjct: 16  TKEYLNEEHAGVVRKAYEFAKHAHREQYRKSGEPYIIHPIQVAGILADLEMDPSTVAAGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT V T   I E F   V  +V+G   V+KLGK+K K    S ++ +A++ R+M
Sbjct: 76  LHDVVEDTEV-TLADISEAFNPEVAMLVDG---VTKLGKIKYK----SQEEQQAENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
           F+AM +++RVI++KLADRLHNMRTL H+P  KQ  I+ ETL++FAPLA  LG+ +IK EL
Sbjct: 128 FVAMAQDIRVILIKLADRLHNMRTLKHLPAEKQRRISNETLEIFAPLAHRLGISKIKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+ +  Y N + Y ++   +     E E  LEE    +  K      +D ++++ ++   
Sbjct: 188 EDTALRYLNPQQYYRIVNLMKKKRAERELYLEEVIGEMKGK------MDEVSIRADLSGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSIY+ +       NE+  +  +RI++            +  + CY VLG++H  W
Sbjct: 242 PKHIYSIYRKMALQNKQFNEIYDLLAVRIVV------------NSIKDCYAVLGIIHTCW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA PK N YQSLHTT+I    +    LEVQIRT EM  IAE GIAAH++ 
Sbjct: 290 KPMPGRFKDYIAMPKANMYQSLHTTVIGPKGDP---LEVQIRTTEMHQIAEFGIAAHWAY 346

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +                  GKTV    ++   +++W   I E+Q++ V    + EF++++
Sbjct: 347 K-----------------EGKTVN-EGSSFEEKLTWFREILEFQDDSV---NAEEFMESL 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             DL    VFVFTP+G++  LP G+  +D+AY IH+EIGNK + AKVNG +V+  + L  
Sbjct: 386 KIDLFSDMVFVFTPKGDVIELPSGSVPIDFAYRIHSEIGNKTIGAKVNGKMVTLDYKLKT 445

Query: 617 AEVVEIITYNVSF 629
            +++EI+T   S+
Sbjct: 446 GDILEILTSKHSY 458


>gi|67921546|ref|ZP_00515064.1| RelA/SpoT protein [Crocosphaera watsonii WH 8501]
 gi|67856658|gb|EAM51899.1| RelA/SpoT protein [Crocosphaera watsonii WH 8501]
          Length = 744

 Score =  343 bits (880), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 200/482 (41%), Positives = 283/482 (58%), Gaps = 49/482 (10%)

Query: 144 NELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVED 203
           ++++L+ RA   A++ H+GQ R+SGEP+I HPV VA IL EL  D   IAAG LHD VED
Sbjct: 34  SDVDLICRAFNFAYQLHEGQTRKSGEPYIAHPVAVAGILRELGGDKAMIAAGFLHDVVED 93

Query: 204 TNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEE 263
           T+V T E IE+ FG  V  +VEG TK+SK      K E       +A++ R+MFLAM ++
Sbjct: 94  TDV-TVEDIEQRFGQEVALLVEGVTKLSKFN-FSNKTEQ------QAENFRRMFLAMAKD 145

Query: 264 VRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMY 323
           +RVI+VKL+DRLHNMRTL  + P KQ  IA ET ++FAPLA  LG++++K ELE+LSF Y
Sbjct: 146 IRVIVVKLSDRLHNMRTLEPLRPDKQRRIALETKEIFAPLANRLGIWRVKWELEDLSFKY 205

Query: 324 TNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT-EIRSVCKEPYS 382
             +EDY K++  V++   + E  +E   K+L K+      LD M ++  E++   K  Y 
Sbjct: 206 LESEDYRKIQNFVSEKRIDRETRIETVKKLLSKR------LDTMGIQVEELQGRPKHLYG 259

Query: 383 IYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRA 442
           IY  + +     +E+  +A LRII+K              + CY  L +VH ++ P+P  
Sbjct: 260 IYCKMQRQNKGFHEIYDLAALRIIVK------------TNEECYRSLAVVHDLFKPMPGR 307

Query: 443 MKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTG 502
            KDYI  PKPN YQSLHTT++     +   LE+QIRT EM  IAE GIAAH+  +   TG
Sbjct: 308 FKDYIGLPKPNLYQSLHTTVVGL---NGRPLEIQIRTLEMHHIAEYGIAAHWKYK--ETG 362

Query: 503 LVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLG 562
              H + +                  + +WL  + +WQ +       +E+VD +  +L  
Sbjct: 363 GSDHTQFSDEDE--------------KFTWLRQLLDWQNDL---KDDQEYVDNLKDNLFD 405

Query: 563 SRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEI 622
             V+VFTP G++  L +GAT VD+AY IHTE+GN+M  A++NG        L N ++VEI
Sbjct: 406 DDVYVFTPNGDVIALARGATAVDFAYRIHTEVGNQMKGARINGRWSVLDQPLQNGDIVEI 465

Query: 623 IT 624
           IT
Sbjct: 466 IT 467


>gi|384165231|ref|YP_005546610.1| GTP pyrophosphokinase (RelA/SpoT) [Bacillus amyloliquefaciens LL3]
 gi|328912786|gb|AEB64382.1| GTP pyrophosphokinase (RelA/SpoT) [Bacillus amyloliquefaciens LL3]
          Length = 734

 Score =  343 bits (880), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 196/491 (39%), Positives = 291/491 (59%), Gaps = 50/491 (10%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           +YL   ++  V +A + A +AH  Q R+SGEP+IIHP++VA IL +LE+D  +IA G LH
Sbjct: 18  TYLPEEQIAFVEKAYLYAQDAHREQYRKSGEPYIIHPIQVAGILVDLEMDPSTIAGGFLH 77

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT+V T + ++E F   V  +V+G   V+KLGK+K K    S ++ +A++ R+MF+
Sbjct: 78  DVVEDTDV-TLDDLKEAFSEEVAMLVDG---VTKLGKIKYK----SQEEQQAENHRKMFV 129

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM +++RVI++KLADRLHNMRTL H+P  KQ  I+ ETL++FAPLA  LG+ +IK ELE+
Sbjct: 130 AMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRISNETLEIFAPLAHRLGISKIKWELED 189

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
            +  Y N + Y ++   +     E E  ++E    + K++E+      + +K +     K
Sbjct: 190 TALRYLNPQQYYRIVNLMKKKRAERELYVDEVVNEVKKRVEE------VNIKADFSGRPK 243

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIY+ +       NE+  +  +RI+        VG +      CY VLG++H  W P
Sbjct: 244 HIYSIYRKMALQNKQFNEIYDLLAVRIL--------VGSIKD----CYAVLGIIHTCWKP 291

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PKPN YQSLHTT+I    +    LEVQIRT EM  IAE G+AAH+    
Sbjct: 292 MPGRFKDYIAMPKPNMYQSLHTTVIGPKGDP---LEVQIRTFEMHEIAEYGVAAHW---- 344

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                   A   G++          A    ++SW   I E+Q E   +  + EF++++  
Sbjct: 345 --------AYKEGKAAN------EEATFEKKLSWFREILEFQNE---STDAEEFMESLKI 387

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           DL    V+VFTP+G++  LP G+  +D++Y IH+EIGNK + AKVNG +V+  H L   +
Sbjct: 388 DLFSDMVYVFTPKGDVIELPSGSVPIDFSYRIHSEIGNKTIGAKVNGKMVTLDHKLRTGD 447

Query: 619 VVEIITYNVSF 629
           +VEI+T   S+
Sbjct: 448 IVEILTSKHSY 458


>gi|416384945|ref|ZP_11684705.1| GTP pyrophosphokinase , (p)ppGpp synthetase II /
           Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
           [Crocosphaera watsonii WH 0003]
 gi|357264961|gb|EHJ13781.1| GTP pyrophosphokinase , (p)ppGpp synthetase II /
           Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
           [Crocosphaera watsonii WH 0003]
          Length = 744

 Score =  343 bits (879), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 200/482 (41%), Positives = 283/482 (58%), Gaps = 49/482 (10%)

Query: 144 NELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVED 203
           ++++L+ RA   A++ H+GQ R+SGEP+I HPV VA IL EL  D   IAAG LHD VED
Sbjct: 34  SDVDLICRAFNFAYQLHEGQTRKSGEPYIAHPVAVAGILRELGGDKAMIAAGFLHDVVED 93

Query: 204 TNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEE 263
           T+V T E IE+ FG  V  +VEG TK+SK      K E       +A++ R+MFLAM ++
Sbjct: 94  TDV-TVEDIEQRFGQEVALLVEGVTKLSKFN-FSNKTEQ------QAENFRRMFLAMAKD 145

Query: 264 VRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMY 323
           +RVI+VKL+DRLHNMRTL  + P KQ  IA ET ++FAPLA  LG++++K ELE+LSF Y
Sbjct: 146 IRVIVVKLSDRLHNMRTLEPLRPDKQRRIALETKEIFAPLANRLGIWRVKWELEDLSFKY 205

Query: 324 TNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT-EIRSVCKEPYS 382
             +EDY K++  V++   + E  +E   K+L K+      LD M ++  E++   K  Y 
Sbjct: 206 LESEDYRKIQNFVSEKRIDRETRIETVKKLLSKR------LDTMGIQVEELQGRPKHLYG 259

Query: 383 IYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRA 442
           IY  + +     +E+  +A LRII+K              + CY  L +VH ++ P+P  
Sbjct: 260 IYCKMQRQNKGFHEIYDLAALRIIVK------------TNEECYRSLAVVHDLFKPMPGR 307

Query: 443 MKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTG 502
            KDYI  PKPN YQSLHTT++     +   LE+QIRT EM  IAE GIAAH+  +   TG
Sbjct: 308 FKDYIGLPKPNLYQSLHTTVVGL---NGRPLEIQIRTLEMHHIAEYGIAAHWKYK--ETG 362

Query: 503 LVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLG 562
              H + +                  + +WL  + +WQ +       +E+VD +  +L  
Sbjct: 363 GSDHTQFSDEDE--------------KFTWLRQLLDWQNDL---KDDQEYVDNLKDNLFD 405

Query: 563 SRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEI 622
             V+VFTP G++  L +GAT VD+AY IHTE+GN+M  A++NG        L N ++VEI
Sbjct: 406 DDVYVFTPNGDVIALARGATAVDFAYRIHTEVGNQMKGARINGRWSVLDQPLQNGDIVEI 465

Query: 623 IT 624
           IT
Sbjct: 466 IT 467


>gi|306830425|ref|ZP_07463595.1| GTP diphosphokinase [Streptococcus gallolyticus subsp. gallolyticus
           TX20005]
 gi|325977390|ref|YP_004287106.1| GTP pyrophosphokinase [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
 gi|304427450|gb|EFM30552.1| GTP diphosphokinase [Streptococcus gallolyticus subsp. gallolyticus
           TX20005]
 gi|325177318|emb|CBZ47362.1| GTP pyrophosphokinase [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
          Length = 739

 Score =  343 bits (879), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 193/494 (39%), Positives = 300/494 (60%), Gaps = 49/494 (9%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  Y+S +++ +V++AL  A +AH  Q R+SGEP+IIHP++VA IL +L LD  ++A G 
Sbjct: 16  TAQYMSESDVAIVQKALDYATKAHISQVRQSGEPYIIHPIQVAGILADLHLDVVTVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT V T + IE EFG  VR IV+G   V+KLGK++ K+    +    A++ R+M
Sbjct: 76  LHDVVEDTEV-TLDDIEAEFGKDVRDIVDG---VTKLGKVEYKSHEEQL----AENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM++++RVI+VKLADRLHNMRTL H+   KQ  I+ ET++++APLA  LG+ +IK EL
Sbjct: 128 LMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y N  ++ K+   + +  +E E  ++E    ++KKI+D  +     +  E+   
Sbjct: 188 EDLSFRYLNEIEFYKISHMMNEKRREREALVDE----IVKKIKD--YTQEQGLYGEVYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSIY+ +   +   +++  +  +R I++           +P  + Y ++G +H +W
Sbjct: 242 PKHIYSIYRKMRDKKKRFDQIYDLIAIRCIME-----------TPSDV-YAMVGYIHELW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA PK NGYQS+HTT    +Y     +E+QIRT+EM  +AE G+AAH++ 
Sbjct: 290 RPMPGRFKDYIAAPKANGYQSIHTT----VYGPKGPIEIQIRTKEMHQVAEYGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  + G V                 +N   A+ ++W+  + E Q+    N  + +FVD++
Sbjct: 346 KQGIKGKV-----------------DNQEQAVGMNWIKELVELQD--ASNGDAVDFVDSV 386

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
            +D+   R++VFTP G ++ LPK +  +D+AY IHT++G K V AKVNG +V  T  L  
Sbjct: 387 KQDIFSERIYVFTPTGAVQELPKDSGPIDFAYAIHTQVGEKAVGAKVNGRMVPLTAKLKT 446

Query: 617 AEVVEIITYNVSFS 630
            +VVEI+T   SF 
Sbjct: 447 GDVVEIVTNPNSFG 460


>gi|299822818|ref|ZP_07054704.1| GTP diphosphokinase [Listeria grayi DSM 20601]
 gi|299816347|gb|EFI83585.1| GTP diphosphokinase [Listeria grayi DSM 20601]
          Length = 740

 Score =  343 bits (879), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 195/491 (39%), Positives = 292/491 (59%), Gaps = 50/491 (10%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++   L +V +A   A +AH  Q R+SGEP+IIHP++VA IL EL +D  ++A+G LHD
Sbjct: 21  YMNKEHLAIVEKAYTFARDAHKEQFRKSGEPYIIHPIQVAGILAELRMDPSTVASGFLHD 80

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            VEDT  VT + ++ EFG  V  +V+G   V+KLGK+K K    S ++ +A++ R+MF+A
Sbjct: 81  VVEDT-PVTLDDLKAEFGEEVAMLVDG---VTKLGKIKYK----SHEEQQAENHRKMFIA 132

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M +++RVI++KLADRLHNMRTL H+P  KQ  IA ETL++FAPLA  LG+ ++K ELE+ 
Sbjct: 133 MAQDIRVILIKLADRLHNMRTLKHLPTQKQRRIANETLEIFAPLAHRLGISRVKWELEDT 192

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           +  Y N + Y     R+  L ++   E E   + ++  + D+  L+ + ++ +I    K 
Sbjct: 193 ALRYLNPQQYY----RIVHLMRQKRDERERYLQDVIDGVNDN--LEELNIQADITGRPKH 246

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIY+ +   +   NE+  +  +RII+            S  + CY VLG++H  W P+
Sbjct: 247 IYSIYRKMSIQQKQFNEIYDLLAVRIIV------------SSIKDCYAVLGIIHTRWKPM 294

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK N YQS+HTT+I    E    LEVQIRT EM  IAE G+AAH+     
Sbjct: 295 PGRFKDYIAMPKSNMYQSIHTTVIGPQGEP---LEVQIRTTEMHQIAEYGVAAHW----- 346

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
                  A   G+    KT   N      +++W   I E+Q E      + +F++++  D
Sbjct: 347 -------AYKEGKVVNAKTSFDN------KMTWFREILEYQNEA---DNAEDFMESLKLD 390

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           L    V+VFTP+G++  LP G+  +D+AY IHTEIGNK + AKVNG +V+  + L   ++
Sbjct: 391 LFSDVVYVFTPKGDVYELPNGSVPLDFAYRIHTEIGNKTIGAKVNGKIVTLDYQLKTGDI 450

Query: 620 VEIITYNVSFS 630
           ++I+T   S+ 
Sbjct: 451 IDILTSKHSYG 461


>gi|188588536|ref|YP_001920360.1| GTP pyrophosphokinase [Clostridium botulinum E3 str. Alaska E43]
 gi|188498817|gb|ACD51953.1| putative GTP diphosphokinase/guanosine-3',5'-bis(diphosphate)
           3'-pyrophosphohydrolase [Clostridium botulinum E3 str.
           Alaska E43]
          Length = 728

 Score =  343 bits (879), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 199/480 (41%), Positives = 284/480 (59%), Gaps = 48/480 (10%)

Query: 145 ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDT 204
           ++E++++A   A +AH  QKR SGEP+IIHP++VA IL EL +D  +IAAGLLHD +EDT
Sbjct: 17  DVEMIKKAYYFAEDAHKEQKRESGEPYIIHPIDVAEILAELGMDTSTIAAGLLHDVIEDT 76

Query: 205 NVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEV 264
              ++E ++  F   +  +V G   V+KLGK++ K +    ++ +AD++R+M LAM +++
Sbjct: 77  -TCSYESMKTIFNEEIANLVNG---VTKLGKIQYKTK----EEQQADNVRKMLLAMAKDI 128

Query: 265 RVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYT 324
           RVII+KLADRLHNMRTL  MP  KQ   A ETL ++APLA  LGM +IK ELE+LSF Y 
Sbjct: 129 RVIIIKLADRLHNMRTLKFMPKGKQKLKAKETLDIYAPLAHRLGMSKIKWELEDLSFRYL 188

Query: 325 NAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIY 384
           + ++Y ++  ++A+   E E  + E    L +K      LD   + ++I    K  YSIY
Sbjct: 189 HEDEYYQLVEQIAEKRVERETYINEVVCYLKEK------LDESGIDSDIEGRPKHFYSIY 242

Query: 385 KAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMK 444
           K ++    SI ++  +  +RI            L +  + CY VLG+VH I+ PIP   K
Sbjct: 243 KKMINKNKSIEQIFDLTAIRI------------LVNSVKDCYGVLGIVHTIYKPIPGRFK 290

Query: 445 DYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLV 504
           DYIA PKPN YQSLHTT+I    ++    E+QIRT EM   AE GIAAH+          
Sbjct: 291 DYIAMPKPNMYQSLHTTVIGNQGKT---FEIQIRTFEMHKTAEYGIAAHWK--------- 338

Query: 505 GHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSR 564
              +   ++   K       +   ++ WL  + EWQ+E      + EF++    DL    
Sbjct: 339 --YKEGDKNEEDKA-----KDFEKKLVWLRDMLEWQKE---TSDAEEFIEGFKIDLFSDE 388

Query: 565 VFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
           VFVFTP+G + NL   AT +D+AY IHT+IGNK V AKVNG +V   + L   E+VEI+T
Sbjct: 389 VFVFTPKGVVINLCAKATPIDFAYRIHTDIGNKCVGAKVNGRIVPLDYTLKTGEIVEILT 448


>gi|315651813|ref|ZP_07904817.1| GTP diphosphokinase [Lachnoanaerobaculum saburreum DSM 3986]
 gi|315485943|gb|EFU76321.1| GTP diphosphokinase [Lachnoanaerobaculum saburreum DSM 3986]
          Length = 762

 Score =  343 bits (879), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 203/502 (40%), Positives = 298/502 (59%), Gaps = 51/502 (10%)

Query: 126 SPERLWEDLRPTISYLSP-NELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
           SPE L + L   I +  P +++ ++ +A  LA +AH+ QKR+SGEP+IIHP+ VA IL E
Sbjct: 25  SPESLHKKLIEIILHYHPSDDISMITKAYELAKKAHNDQKRKSGEPYIIHPICVAIILAE 84

Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
           LELD E+IAAGLLHD +EDT V+T+  + + FG  V  +V+G   V+KL +L  KN+   
Sbjct: 85  LELDKETIAAGLLHDVIEDT-VITYNELADMFGIDVANLVDG---VTKLTQLSLKNDKIE 140

Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
           +Q   A++LR+MFLAM +++RVI++KLADRLHNMRTL +M P KQ   A ET+ +++P+A
Sbjct: 141 MQ---AENLRKMFLAMAKDIRVILIKLADRLHNMRTLQYMKPEKQKEKARETMDIYSPIA 197

Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
           + LG+ +IK EL++LS  Y + + Y  +  ++A   ++ ++ ++E    ++KK    Q L
Sbjct: 198 QRLGISKIKVELDDLSLKYLHPDVYYDLSEKLAFRKEQRQQFVDE----IIKKFS--QHL 251

Query: 365 DLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
               +K  I    K  +SIYK ++    +++++  +  +RII++                
Sbjct: 252 SATGMKYTINGRVKHLFSIYKKMVNQNKTLDQIYDVFAIRIIVESVTD------------ 299

Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDL 484
           CY  LG  H I+ PIP   KDYIA PK N YQSLHTTLI    ++    EVQIRT EM  
Sbjct: 300 CYLALGTAHEIYKPIPGRFKDYIAMPKTNMYQSLHTTLIS---DTGQPFEVQIRTYEMHK 356

Query: 485 IAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFV 544
            AE GIAAH+  +            +G   +G            +++WL  I EWQ +  
Sbjct: 357 TAEFGIAAHWKYK---------ESGSGSEAKGAEDA--------KMNWLRQILEWQRDMS 399

Query: 545 GNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAK 602
            N    EF+  I    DL    V+ FTP G++KNLP G+  +D+AY IH+ +GNKMV A+
Sbjct: 400 DNA---EFLKVIKSDFDLFSDNVYCFTPDGDVKNLPAGSNPIDFAYSIHSAVGNKMVGAR 456

Query: 603 VNGNLVSPTHVLANAEVVEIIT 624
           VNG LV+  + L + + VEIIT
Sbjct: 457 VNGRLVNIDYELKSGDRVEIIT 478


>gi|410724219|ref|ZP_11363418.1| (p)ppGpp synthetase, RelA/SpoT family [Clostridium sp. Maddingley
           MBC34-26]
 gi|410602505|gb|EKQ56985.1| (p)ppGpp synthetase, RelA/SpoT family [Clostridium sp. Maddingley
           MBC34-26]
          Length = 738

 Score =  343 bits (879), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 197/480 (41%), Positives = 285/480 (59%), Gaps = 43/480 (8%)

Query: 145 ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDT 204
           ++ +V +A   A +AH  QKR SGEP+IIHP+ VA IL EL +D  +I AGLLHD +EDT
Sbjct: 17  DVNMVEKAYHFAEQAHKDQKRESGEPYIIHPIAVAEILAELGMDTNTIVAGLLHDVIEDT 76

Query: 205 NVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEV 264
           +  +++   + F A +  +VEG TK++KLG+++ K +    ++ +AD++R+M LAM +++
Sbjct: 77  DC-SYDETVKLFNAEIANLVEGVTKLTKLGEMEYKTK----EEQQADNVRKMLLAMAKDI 131

Query: 265 RVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYT 324
           RVII+KLADRLHNMRTL  MP  KQ + A ETL ++APLA  LGM +IK ELE+L F Y 
Sbjct: 132 RVIIIKLADRLHNMRTLKFMPEKKQKNKAKETLDIYAPLAHRLGMSKIKWELEDLCFRYL 191

Query: 325 NAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIY 384
           + ++Y ++   +A+   E E  +++  K L +K+E         + ++I    K  YSIY
Sbjct: 192 HEKEYYELVDSIAEKRVERETYIKDIVKDLYEKLETS------GIHSDIDGRPKHFYSIY 245

Query: 385 KAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMK 444
           K ++    SI ++  +  +R+            L    + CY VLG+VH I+ PIP   K
Sbjct: 246 KKMVSKNKSIEQIFDLTAIRV------------LVHSVKDCYGVLGIVHTIYRPIPGRFK 293

Query: 445 DYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLV 504
           DYIA PKPN YQSLHTT+I    ++    E+QIRT EM   AE GIAAH+    +  G  
Sbjct: 294 DYIAMPKPNMYQSLHTTVIGPQGKT---FEIQIRTFEMHKTAEYGIAAHWK---YKEGDA 347

Query: 505 GHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSR 564
           G    + +    K           ++ WL  + EWQ+E      + EF++    DL    
Sbjct: 348 GKPEQDKQKDFEK-----------KLVWLRDMLEWQKE---TSDAEEFIEGFKIDLFSDE 393

Query: 565 VFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
           VFVFTP+G + NL   AT +D+AY IHT+IGNK + AKVNG +V   + L   E+VEI+T
Sbjct: 394 VFVFTPKGVVINLCNNATPIDFAYRIHTDIGNKCIGAKVNGKIVPLDYTLKTGEIVEILT 453


>gi|126700359|ref|YP_001089256.1| GTP pyrophosphokinase (RelA/SpoT) [Clostridium difficile 630]
 gi|254976339|ref|ZP_05272811.1| putative GTP pyrophosphokinase [Clostridium difficile QCD-66c26]
 gi|255093724|ref|ZP_05323202.1| putative GTP pyrophosphokinase [Clostridium difficile CIP 107932]
 gi|255101915|ref|ZP_05330892.1| putative GTP pyrophosphokinase [Clostridium difficile QCD-63q42]
 gi|255307784|ref|ZP_05351955.1| putative GTP pyrophosphokinase [Clostridium difficile ATCC 43255]
 gi|255315476|ref|ZP_05357059.1| putative GTP pyrophosphokinase [Clostridium difficile QCD-76w55]
 gi|255518139|ref|ZP_05385815.1| putative GTP pyrophosphokinase [Clostridium difficile QCD-97b34]
 gi|255651255|ref|ZP_05398157.1| putative GTP pyrophosphokinase [Clostridium difficile QCD-37x79]
 gi|260684319|ref|YP_003215604.1| GTP pyrophosphokinase [Clostridium difficile CD196]
 gi|260687978|ref|YP_003219112.1| GTP pyrophosphokinase [Clostridium difficile R20291]
 gi|296452442|ref|ZP_06894143.1| GTP diphosphokinase [Clostridium difficile NAP08]
 gi|296877791|ref|ZP_06901817.1| GTP diphosphokinase [Clostridium difficile NAP07]
 gi|306521098|ref|ZP_07407445.1| putative GTP pyrophosphokinase [Clostridium difficile QCD-32g58]
 gi|384361963|ref|YP_006199815.1| GTP pyrophosphokinase [Clostridium difficile BI1]
 gi|423081063|ref|ZP_17069675.1| GTP diphosphokinase [Clostridium difficile 002-P50-2011]
 gi|423085064|ref|ZP_17073522.1| GTP diphosphokinase [Clostridium difficile 050-P50-2011]
 gi|423089842|ref|ZP_17078191.1| GTP diphosphokinase [Clostridium difficile 70-100-2010]
 gi|115251796|emb|CAJ69631.1| GTP pyrophosphokinase (RelA/SpoT) [Clostridium difficile 630]
 gi|260210482|emb|CBA64959.1| putative GTP pyrophosphokinase [Clostridium difficile CD196]
 gi|260213995|emb|CBE06110.1| putative GTP pyrophosphokinase [Clostridium difficile R20291]
 gi|296258772|gb|EFH05666.1| GTP diphosphokinase [Clostridium difficile NAP08]
 gi|296431242|gb|EFH17063.1| GTP diphosphokinase [Clostridium difficile NAP07]
 gi|357550919|gb|EHJ32724.1| GTP diphosphokinase [Clostridium difficile 050-P50-2011]
 gi|357551372|gb|EHJ33162.1| GTP diphosphokinase [Clostridium difficile 002-P50-2011]
 gi|357557606|gb|EHJ39140.1| GTP diphosphokinase [Clostridium difficile 70-100-2010]
          Length = 735

 Score =  342 bits (878), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 193/488 (39%), Positives = 292/488 (59%), Gaps = 52/488 (10%)

Query: 138 ISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           I   +PN   E+V +A  LA +AH+GQ R+SGEP+ IHP+ VA IL E+ELD E+I AGL
Sbjct: 13  IKVYAPNANFEMVEKAYNLAKKAHEGQYRKSGEPYFIHPLAVANILIEMELDIETITAGL 72

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT   T+E I++EFG  V  +V+G   V+KLG++K +    S ++ ++++LR+M
Sbjct: 73  LHDVVEDTEY-TYEDIKKEFGKEVADLVDG---VTKLGQIKYR----SKEETQSENLRKM 124

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
           FLAM +++RVI++KLADRLHNMRTL +MPP K    A ETL+++  +A  LG+ +IK EL
Sbjct: 125 FLAMAKDIRVILIKLADRLHNMRTLKYMPPEKAKYKAKETLEIYGGIAHRLGISKIKWEL 184

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+ +  + + E Y  +  RV+    + E  ++   ++L      D+F DL ++  ++   
Sbjct: 185 EDRALRFMDPEGYYDLVSRVSMKRSQREDYIQGIVELL-----KDKFKDL-SIPCDVYGR 238

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSIY+ + K   +  E+  +  +RI            L    + CY VLG+VH +W
Sbjct: 239 PKHFYSIYRKMQKKHKTFEEIFDLTAVRI------------LVDNVKDCYAVLGIVHTLW 286

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            PIP   KDYIA PKPN YQSLHTT++    E    LE+QIRT EM  IAE GIAAH+  
Sbjct: 287 RPIPGRFKDYIAMPKPNMYQSLHTTVVGPDGEP---LEIQIRTHEMHNIAENGIAAHWKY 343

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +                   + +    + +  ++ WL  + EW+++       +EF+D +
Sbjct: 344 K-------------------EGISSKESKVEEKLQWLRQMMEWEKDL---KDPQEFMDAL 381

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             D+  S+V+VFTP+G++  LP  +T +D+AY +HT +GNK V AK++G +V   + L N
Sbjct: 382 KEDVFNSQVYVFTPKGDVIELPAESTPIDFAYRVHTNVGNKCVGAKIDGRIVPIDYKLQN 441

Query: 617 AEVVEIIT 624
             +VE++T
Sbjct: 442 GNIVEVLT 449


>gi|108804177|ref|YP_644114.1| (p)ppGpp synthetase I SpoT/RelA [Rubrobacter xylanophilus DSM 9941]
 gi|108765420|gb|ABG04302.1| (p)ppGpp synthetase I, SpoT/RelA [Rubrobacter xylanophilus DSM
           9941]
          Length = 742

 Score =  342 bits (878), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 203/478 (42%), Positives = 286/478 (59%), Gaps = 53/478 (11%)

Query: 147 ELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNV 206
           EL+  A  LA  AH GQ+RRSGEPFI+HP+  A IL +L +D  +IAA LLHD +EDT V
Sbjct: 38  ELIAEAYNLAHAAHRGQRRRSGEPFILHPLATADILADLRMDPTTIAAALLHDVLEDTGV 97

Query: 207 VTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRV 266
            T E +   FGA V  IV+G   V+KL +L   N    +++ +A+ LR+M +AM+ +VRV
Sbjct: 98  -TKEELAGRFGAEVAEIVDG---VTKLKRLPSGN----LEEAQAESLRKMIVAMSRDVRV 149

Query: 267 IIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNA 326
           II+KLADRLHNMRTL ++    Q   ATETL+++APLA  LG+Y +K ELE+L+F   + 
Sbjct: 150 IIIKLADRLHNMRTLEYLKRETQLEKATETLEIYAPLAHRLGIYSLKWELEDLAFATLHP 209

Query: 327 EDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKA 386
             Y ++KR VA    E E        I  +  E  ++L    ++ E+R   K  YSIY  
Sbjct: 210 RRYEEIKRLVAARRDEREA------FISARAAELKRYLSEAGIEAEVRGRVKHFYSIYNK 263

Query: 387 VLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDY 446
           +++     NE+  +A LR+I+               + CY  LG++H +W PIP   KDY
Sbjct: 264 MVRRNKEFNEIYDLAGLRVIV------------GSVRDCYGALGVIHSVWKPIPGRFKDY 311

Query: 447 IATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGH 506
           IA PK N YQSLHTT++    E    LE+QIRTEEMD  AE GIAAH+   ++  G VG 
Sbjct: 312 IAMPKFNMYQSLHTTVMS--NEGKL-LEIQIRTEEMDRTAEYGIAAHW---MYKEG-VGE 364

Query: 507 ARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSRVF 566
              NGR              A R++WL ++ EWQ+E     ++ EF++ +  +L    V+
Sbjct: 365 ---NGR--------------ADRLAWLKSMMEWQQE---TSSALEFMEALKGELGADEVY 404

Query: 567 VFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
           VFTP+G++ +LP GAT +D+AY +HTE+G++ + AKVNG +V     L + + VEIIT
Sbjct: 405 VFTPKGDVISLPSGATPIDFAYHVHTEVGHRCIGAKVNGRIVPLDSELVSGDRVEIIT 462


>gi|401564457|ref|ZP_10805350.1| GTP diphosphokinase [Selenomonas sp. FOBRC6]
 gi|400188859|gb|EJO22995.1| GTP diphosphokinase [Selenomonas sp. FOBRC6]
          Length = 743

 Score =  342 bits (878), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 203/512 (39%), Positives = 301/512 (58%), Gaps = 53/512 (10%)

Query: 117 VSSDAFKEDSPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPV 176
           +S DA +  + + + + +R   SY +  +L+ +R+A   A +AH GQ R SG+ +IIHP+
Sbjct: 1   MSDDAQRAVTLDMILDKVR---SYQADADLDKIRKAYAYAEQAHSGQVRISGDAYIIHPL 57

Query: 177 EVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKL 236
            VA IL  L LD E+I A LLHD VEDT   T E +E EFG  +  +++G   V+KLG++
Sbjct: 58  NVAYILTGLHLDDETICAALLHDVVEDT-CATLEEMEAEFGKNIMALIDG---VTKLGRI 113

Query: 237 KCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATET 296
               E  S +DV+ ++ R+MFLAM +++RVI++KLADRLHNMRTL +M   K+  IA ET
Sbjct: 114 ----EYMSKEDVQLENYRKMFLAMAKDIRVIMIKLADRLHNMRTLKYMREDKRHRIAKET 169

Query: 297 LQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMK 356
           L+V+APLA  LG+  IK ELE+L   Y   E Y  +   V    KE ++ + E+ + + +
Sbjct: 170 LEVYAPLANRLGISNIKVELEDLCLRYLEPEAYYTLVEEVKHKRKERQEFIRESIEQIRE 229

Query: 357 KIEDDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVG 416
           K+E         +K EI+   K  YSIY+ + +   S+NE+  ++ +R+++         
Sbjct: 230 KLE------AAGIKAEIKGRAKHFYSIYRKMKRDNKSVNEIYDLSAVRVLV--------- 274

Query: 417 PLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQ 476
              S  + CY VLG++H +W PIP   KDYIA PK NGYQSLHTT++   Y     LE+Q
Sbjct: 275 ---SSVKDCYGVLGVIHAMWKPIPGRFKDYIAMPKSNGYQSLHTTVMTHGYP----LEIQ 327

Query: 477 IRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAI 536
           IRT+ M  ++E G+AAH+             +  GRS  G T   +      ++SWL  +
Sbjct: 328 IRTKAMHQVSEFGVAAHWK-----------YKEAGRSI-GATDETDQ-----KMSWLRQM 370

Query: 537 REWQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGN 596
              Q+E+      +EF + +  D+    VFVFTPRG++ +LPKG+  +D+AY IHTEIG+
Sbjct: 371 VSLQKEY---DDPKEFFEALKLDVFSDEVFVFTPRGDVIDLPKGSNPIDFAYHIHTEIGH 427

Query: 597 KMVAAKVNGNLVSPTHVLANAEVVEIITYNVS 628
             V AKVNG +V   + L N ++V I+T   S
Sbjct: 428 HCVGAKVNGKIVPLEYKLKNGDIVSIVTNKAS 459


>gi|419718385|ref|ZP_14245704.1| GTP diphosphokinase [Lachnoanaerobaculum saburreum F0468]
 gi|383305419|gb|EIC96785.1| GTP diphosphokinase [Lachnoanaerobaculum saburreum F0468]
          Length = 762

 Score =  342 bits (878), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 202/502 (40%), Positives = 298/502 (59%), Gaps = 51/502 (10%)

Query: 126 SPERLWEDLRPTISYLSP-NELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
           SPE L + L   I +  P +++ ++ +A  LA +AH+ QKR+SGEP++IHP+ VA IL E
Sbjct: 25  SPESLHKKLIEIILHYHPSDDISMITKAYELAKKAHNDQKRKSGEPYLIHPICVAIILAE 84

Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
           LELD E+IAAGLLHD +EDT V+T+  + + FG  V  +V+G   V+KL +L  KN+   
Sbjct: 85  LELDKETIAAGLLHDVIEDT-VITYNELADMFGIDVANLVDG---VTKLTQLSLKNDKIE 140

Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
           +Q   A++LR+MFLAM +++RVI++KLADRLHNMRTL +M P KQ   A ET+ +++P+A
Sbjct: 141 MQ---AENLRKMFLAMAKDIRVILIKLADRLHNMRTLQYMKPEKQKEKARETMDIYSPIA 197

Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
           + LG+ +IK EL++LS  Y + + Y  +  ++A   ++ ++ ++E    ++KK    Q L
Sbjct: 198 QRLGISKIKVELDDLSLKYLHPDVYYDLSEKLAFRKEQRQQFVDE----IIKKFS--QHL 251

Query: 365 DLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
               +K  I    K  +SIYK ++    +++++  +  +RII++                
Sbjct: 252 SATGMKYTINGRVKHLFSIYKKMVNQNKTLDQIYDVFAIRIIVESVTD------------ 299

Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDL 484
           CY  LG  H I+ PIP   KDYIA PK N YQSLHTTLI    ++    EVQIRT EM  
Sbjct: 300 CYLALGTAHEIYKPIPGRFKDYIAMPKTNMYQSLHTTLIS---DTGQPFEVQIRTYEMHK 356

Query: 485 IAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFV 544
            AE GIAAH+  +            +G   +G            +++WL  I EWQ +  
Sbjct: 357 TAEFGIAAHWKYK---------ESGSGSEAKGAEDA--------KMNWLRQILEWQRDMS 399

Query: 545 GNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAK 602
            N    EF+  I    DL    V+ FTP G++KNLP G+  +D+AY IH+ +GNKMV A+
Sbjct: 400 DNA---EFLKVIKSDFDLFSDNVYCFTPDGDVKNLPAGSNPIDFAYSIHSAVGNKMVGAR 456

Query: 603 VNGNLVSPTHVLANAEVVEIIT 624
           VNG LV+  + L + + VEIIT
Sbjct: 457 VNGRLVNIDYELKSGDRVEIIT 478


>gi|404328487|ref|ZP_10968935.1| (p)ppGpp synthetase I SpoT/RelA [Sporolactobacillus vineae DSM
           21990 = SL153]
          Length = 724

 Score =  342 bits (878), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 198/492 (40%), Positives = 290/492 (58%), Gaps = 52/492 (10%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           +YL   ++EL+++A   A +AH GQ R+SGEP+I HPVEVA IL  L++D  +I +G LH
Sbjct: 12  TYLDEKDIELIKKAYEYAKKAHAGQLRKSGEPYITHPVEVAGILVNLKMDVTTIMSGFLH 71

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT V T + +  EFG  V  +V+G TK+          E  S +D +A++ R+MF+
Sbjct: 72  DVVEDTPV-TLDDVRNEFGDNVAMLVDGVTKLRHF-------EYSSKEDQQAENHRKMFV 123

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM  ++R +IVKLADRLHNMRTL +M   KQ   A ET+++FAPLA  LG+  IK ELE+
Sbjct: 124 AMARDLRCVIVKLADRLHNMRTLKYMTKEKQIQKANETMEIFAPLANRLGISAIKWELED 183

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIED-DQFLDLMTVKTEIRSVC 377
           +S  Y N + Y K    + +L K+  +E E     + + +ED  +++  + +K EI    
Sbjct: 184 ISLRYLNPQQYYK----IVNLMKQKREERE---AYIAQVVEDLKKYVKSVHIKAEISGRP 236

Query: 378 KEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWT 437
           K  YSIY+ ++      NE+  +  +RII++              + CY +LG++H  W 
Sbjct: 237 KHIYSIYRKMVNQHKQFNEIYDLFAVRIIVE------------SIKDCYAILGIIHTHWK 284

Query: 438 PIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGR 497
           P+P   KDYIA PK N YQSLHTT+I    +    LEVQ+RTEEM  +AE GIAAH++ +
Sbjct: 285 PMPGRFKDYIAMPKANMYQSLHTTVIGPKGDP---LEVQVRTEEMHDVAEYGIAAHWAYK 341

Query: 498 VFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTIT 557
                             GKT  +NN     +++W   I E+Q+E      +REF++++ 
Sbjct: 342 -----------------EGKTKNINN-KFEDKLTWFREILEYQKE---TDDAREFMESLK 380

Query: 558 RDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANA 617
            DL    VFVFTP+G++  LP G+  +D+AY IHTEIGNK V A+VNG +V   + L   
Sbjct: 381 MDLFSDTVFVFTPKGDVIELPVGSVPIDFAYRIHTEIGNKTVGARVNGKMVPLDYKLKTG 440

Query: 618 EVVEIITYNVSF 629
           ++VE++T   S+
Sbjct: 441 DIVEVVTSKHSY 452


>gi|408791615|ref|ZP_11203225.1| putative GTP diphosphokinase [Leptospira meyeri serovar Hardjo str.
           Went 5]
 gi|408463025|gb|EKJ86750.1| putative GTP diphosphokinase [Leptospira meyeri serovar Hardjo str.
           Went 5]
          Length = 684

 Score =  342 bits (877), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 196/488 (40%), Positives = 293/488 (60%), Gaps = 43/488 (8%)

Query: 141 LSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDT 200
           L P +  L+ +A  +A + H+GQKR SGEP+IIHP+ VA +L EL LD  +IAAGLLHD 
Sbjct: 21  LGPEKATLIEKAYHIADKMHEGQKRLSGEPYIIHPMNVASVLDELGLDERAIAAGLLHDV 80

Query: 201 VEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAM 260
           VEDT+  + E +  EFG  +  +VEG TK+S++       ++ S +   A+++R+M LA 
Sbjct: 81  VEDTSY-SKEDMAREFGEDIAALVEGVTKISEI-------KSQSKETEAAENIRKMLLAT 132

Query: 261 TEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLS 320
            ++VRV+++KLAD+ HN+RTL   P  KQ  IA E L ++AP+A  LG+Y++K ELE+L+
Sbjct: 133 IKDVRVMLIKLADKTHNVRTLKFQPEEKQKRIAKEVLSLYAPIAGRLGVYKVKFELEDLA 192

Query: 321 FMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEP 380
           F   + E+Y ++K+RV+    E ++ +E+  KI++K     Q L  +++   I    K  
Sbjct: 193 FQSLHPEEYQEIKKRVSAKKSERDEYIEKI-KIILK-----QRLAEISIDARIDGRAKHF 246

Query: 381 YSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIP 440
           YSIY+ ++    S +E+  +  +RII             +  + CY VLG+VH +WTPIP
Sbjct: 247 YSIYRKMVTKEKSFSEIFDLRAVRII------------TNEIKDCYGVLGIVHTLWTPIP 294

Query: 441 RAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFV 500
              KDYIATPK N YQSLHTT+       M   EVQIRT++M+ IAE G+AAH++     
Sbjct: 295 GRFKDYIATPKTNLYQSLHTTVFGPDGRPM---EVQIRTKDMNAIAENGVAAHWA----- 346

Query: 501 TGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDL 560
                  + +    +   +  N    A R+ WL  ++ WQ+    ++ S+EF++ +  DL
Sbjct: 347 ------YKESTNLSKTSVILQNGVENAFRMKWLEILKSWQDP---SLDSKEFMEELQYDL 397

Query: 561 LGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVV 620
               VFVFTP+GEI  +PKGATV+DYA+ IHT++G      KVNG +V+    L + + V
Sbjct: 398 HEDEVFVFTPKGEIIEMPKGATVLDYAFRIHTDVGLHARGGKVNGRMVTLRTELKSGDQV 457

Query: 621 EIITYNVS 628
           EIIT   S
Sbjct: 458 EIITEKSS 465


>gi|317122080|ref|YP_004102083.1| (p)ppGpp synthetase I SpoT/RelA [Thermaerobacter marianensis DSM
           12885]
 gi|315592060|gb|ADU51356.1| (p)ppGpp synthetase I, SpoT/RelA [Thermaerobacter marianensis DSM
           12885]
          Length = 731

 Score =  342 bits (877), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 204/516 (39%), Positives = 300/516 (58%), Gaps = 63/516 (12%)

Query: 113 LSPSVSSDAFKEDSPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFI 172
           L PS++ D   E +             YL P EL+ +RRA   +  AH GQKR SG  FI
Sbjct: 5   LQPSITPDELLERAGR-----------YLGPAELDWLRRAFEFSKAAHQGQKRASGRDFI 53

Query: 173 IHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSK 232
            HP+ VA IL +LELD  ++ A LLHDTVEDT V T E +E EFG  V  +V+G TK+++
Sbjct: 54  EHPLAVALILADLELDAATLVAALLHDTVEDTPV-TLEEVEREFGPEVALLVDGVTKLNQ 112

Query: 233 LGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSI 292
           +       E  +  + +A++LR+MFLAM  ++RV+++KLADRLHNMRTL+ +P  KQ + 
Sbjct: 113 I-------EWRTRLEEQAENLRKMFLAMARDIRVVLIKLADRLHNMRTLAVVPREKQIAK 165

Query: 293 ATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANK 352
           + ETL++FAPLA  LGM QI+ ELE+L+  Y   E Y    R +A+       E EE  +
Sbjct: 166 SRETLEIFAPLAHRLGMSQIQWELEDLALRYLEPERY----RELAERIPRKRAEREELAQ 221

Query: 353 ILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPC 412
           +++  ++    L    ++ +I+   K  YSIY+ + +    ++++  +  +R+I+     
Sbjct: 222 VIIATLK--ARLAEAGIRADIQGRAKHFYSIYRKMYEQGKDLSQIYDLIAVRVIV----- 274

Query: 413 SGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFR 472
                     + CY  LG+VH IW P+P   KDYIATPK N YQSLHTT+I    E    
Sbjct: 275 -------DTVKDCYGALGVVHTIWRPLPGRFKDYIATPKSNMYQSLHTTVIGPQGEP--- 324

Query: 473 LEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISW 532
            E+QIRT +M   AE GIAAH+  +                 RG+T    + +   +++W
Sbjct: 325 FEIQIRTWDMHRTAEYGIAAHWRYK----------------ERGRT----DRDFDAKLAW 364

Query: 533 LNAIREWQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHT 592
           L  + EWQ +  G+  +REF++++  D+    VFVFTP+G++ +LP G+T VD+AY IHT
Sbjct: 365 LRQVLEWQNDL-GD--AREFMESLKIDVFSDEVFVFTPKGDVIDLPAGSTPVDFAYRIHT 421

Query: 593 EIGNKMVAAKVNGNLVSPTHVLANAEVVEIITYNVS 628
           EIG++ V AKVNG +V   + L N ++VEI+T   S
Sbjct: 422 EIGHRCVGAKVNGRIVPLDYRLKNGDIVEILTNKQS 457


>gi|258539745|ref|YP_003174244.1| GTP pyrophosphokinase [Lactobacillus rhamnosus Lc 705]
 gi|257151421|emb|CAR90393.1| GTP pyrophosphokinase [Lactobacillus rhamnosus Lc 705]
          Length = 741

 Score =  342 bits (877), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 195/486 (40%), Positives = 285/486 (58%), Gaps = 49/486 (10%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           +Y++P  L  V +A   A   H  Q R+SGEP+IIHP++VA IL EL++D E++A+G LH
Sbjct: 18  AYMNPEHLAFVEKAYKFAAYVHKDQVRKSGEPYIIHPIQVAGILAELKMDPETVASGYLH 77

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDTN+ T   IEE FG  V  IV+G TK+SK+  +  K+E        A++ R+M L
Sbjct: 78  DVVEDTNI-TLGDIEEVFGHDVAVIVDGVTKLSKVTYVAHKDE-------LAENHRKMLL 129

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM +++RVI+VKLADRLHNMRTL H+ P KQ  IA ETL+++APLA  LG+  IK +LE+
Sbjct: 130 AMAKDLRVIMVKLADRLHNMRTLQHLRPDKQRRIANETLEIYAPLADRLGISTIKWKLED 189

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
           LS  Y N + Y ++   +     E E  ++EA + + K + D      + +K EI    K
Sbjct: 190 LSLRYLNPQQYYRIAHLMNSKRTEREAYIQEAIEEIKKALAD------LHIKYEIYGRPK 243

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIYK +       +E+  +  +R+I                + CY VLG +H  W P
Sbjct: 244 HIYSIYKKMRDKHKQFDELYDLLAIRVI------------TETIKDCYAVLGAIHTKWKP 291

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PK N YQS+HTT+I  + +    LEVQIRTEEM  +AE G+AAH++ + 
Sbjct: 292 MPGRFKDYIAMPKANLYQSIHTTVIGPMGKP---LEVQIRTEEMHHVAEYGVAAHWAYK- 347

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                            G+T  +       ++     I E Q+E   +  + +F++++  
Sbjct: 348 ----------------EGQTSKVQYDKAGKKLDIFREILELQDE---SSDAADFMESVKG 388

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           D+   RV+VFTP+G++  LPKG+  +D+ Y+IHTE+GN  V AKVNG +V   +VL N +
Sbjct: 389 DIFTDRVYVFTPKGDVYELPKGSNPLDFGYLIHTEVGNHTVGAKVNGKIVPLNYVLKNGD 448

Query: 619 VVEIIT 624
           +VE++T
Sbjct: 449 IVEMLT 454


>gi|160936541|ref|ZP_02083908.1| hypothetical protein CLOBOL_01431 [Clostridium bolteae ATCC
           BAA-613]
 gi|158440332|gb|EDP18077.1| hypothetical protein CLOBOL_01431 [Clostridium bolteae ATCC
           BAA-613]
          Length = 761

 Score =  342 bits (877), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 201/507 (39%), Positives = 298/507 (58%), Gaps = 61/507 (12%)

Query: 126 SPERLWEDLRPTISYLSP-NELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
           SPE L++DL  TI    P +++ ++ +A  +A EAH  QKR+SGEP+IIHP+ VA IL +
Sbjct: 22  SPEVLYQDLINTIRKYHPSDDITMIEKAYRIADEAHKEQKRKSGEPYIIHPLCVAIILAD 81

Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
           LE+D E+IAAGLLHD VEDT ++T E++ +EFG+ V  +V+G TK+++L   K K E   
Sbjct: 82  LEMDKETIAAGLLHDVVEDT-IMTLEQLTKEFGSEVSFLVDGVTKLTQLNWDKDKVE--- 137

Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
              ++AD+LR+MFLAM +++RVII+KLADRLHNMRT  +  P KQ   A ET++++AP+A
Sbjct: 138 ---IQADNLRKMFLAMAKDIRVIIIKLADRLHNMRTGQYWKPEKQKEKARETMEIYAPIA 194

Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
             LG+ +IK EL++LS  +   + Y  +  +VA      E  ++E    +   +ED    
Sbjct: 195 DRLGISKIKIELDDLSLKFLQPDVYYDLVEKVALRKDTREAFVQEIVDEVKSHMED---- 250

Query: 365 DLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
               +++ +    K  +SIYK ++    +++++  +  +RI+++              + 
Sbjct: 251 --AGIESTVGGRVKHFFSIYKKMVNQNKTLDQIYDLFAVRIMVE------------TVKD 296

Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRT 479
           CY  LG++H ++ PIP   KDYIA PK N YQSLHTTLI     PF        E+QIRT
Sbjct: 297 CYAALGVIHEMYKPIPGRFKDYIAMPKQNMYQSLHTTLIGSNGQPF--------EIQIRT 348

Query: 480 EEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREW 539
            EM   AE GIAAH+  +   +G V                        ++SWL  I EW
Sbjct: 349 YEMHRTAEYGIAAHWKYKESGSGQVAAGSAEA-----------------KLSWLRQILEW 391

Query: 540 QEEFVGNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNK 597
           Q +      S+EF+  +    DL    V+ FTP G++K LP G+T +D+AY IH+ +GNK
Sbjct: 392 QRD---TDDSKEFLSMVKGDLDLFSDSVYCFTPSGDVKTLPSGSTPIDFAYCIHSAVGNK 448

Query: 598 MVAAKVNGNLVSPTHVLANAEVVEIIT 624
           MV A+VNG LV   +V+ N + +EIIT
Sbjct: 449 MVGARVNGKLVPIEYVIQNGDQLEIIT 475


>gi|229828401|ref|ZP_04454470.1| hypothetical protein GCWU000342_00462 [Shuttleworthia satelles DSM
           14600]
 gi|229792995|gb|EEP29109.1| hypothetical protein GCWU000342_00462 [Shuttleworthia satelles DSM
           14600]
          Length = 790

 Score =  342 bits (877), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 202/535 (37%), Positives = 307/535 (57%), Gaps = 64/535 (11%)

Query: 98  RSSLLHVACKRWRLCLSPSVSSDAFKEDSPERLWEDLRPTISYLSPN-ELELVRRALMLA 156
           R  L  +  K  R   +  +++D F +  PE ++ +L   I+   PN ++ ++ +A  +A
Sbjct: 10  REQLEQIEKKILRAQAARVIATDDFVD--PEVIYRELVARINRYHPNTDISMIEKAYGIA 67

Query: 157 FEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEF 216
            +AH  QKR+SGEP+IIHP+ VA IL +LELD E+I  GLLHD VEDT V++ + +  EF
Sbjct: 68  RQAHKDQKRKSGEPYIIHPLSVALILADLELDKETIVGGLLHDVVEDT-VMSLDDVRREF 126

Query: 217 GATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLH 276
              +  +V+G   V+KLG+L    +   +Q   A++LR+MFLAM++++RV+++KLADRLH
Sbjct: 127 SDEIALLVDG---VTKLGQLSYDADKVEIQ---AENLRKMFLAMSKDIRVLLIKLADRLH 180

Query: 277 NMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRV 336
           NMRTL  M P KQ   A ET++++APLA+ LG+ ++K EL++L+  +   + Y  +  ++
Sbjct: 181 NMRTLKFMTPAKQKEKARETMEIYAPLAQRLGISKVKVELDDLALKFLEPDAYYDLLEQL 240

Query: 337 ADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINE 396
                E  + ++    ++ ++I      D   +K +I    K  +SIYK ++    ++++
Sbjct: 241 NQRESERSEYIQSLADLVTRQI------DAAGIKAKIYGRAKHLFSIYKKMVNQHKTLDQ 294

Query: 397 VNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQ 456
           +  +  +RII+               + CY  LG++H  +TPIP   KDYIA PKPN YQ
Sbjct: 295 IYDLFAVRIIV------------DDLKDCYASLGIIHEHYTPIPGRFKDYIAMPKPNMYQ 342

Query: 457 SLHTTLI-----PFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNG 511
           SLHTT+I     PF        E+QIRT EM  I+E GIAAH+  +              
Sbjct: 343 SLHTTVIGPKGQPF--------EIQIRTWEMHRISEYGIAAHWKYK-------------- 380

Query: 512 RSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD--LLGSRVFVFT 569
            S  G T          ++SWL  I EWQ++   N   +EFV  I  D  L    V+ FT
Sbjct: 381 ESGEGATTNQEEQ----KLSWLRQILEWQQDMTDN---KEFVSLIKSDLNLFSDTVYCFT 433

Query: 570 PRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
           P G++KNLP G+T VD+AY IH+ +GN+MV AKVNG LV   + + N + +EIIT
Sbjct: 434 PTGDVKNLPAGSTPVDFAYSIHSAVGNRMVGAKVNGKLVPIDYGIQNGDRIEIIT 488


>gi|283138927|gb|ADB12530.1| putative GTP pyrophosphokinase RelA [uncultured bacterium 9F08]
          Length = 736

 Score =  342 bits (877), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 201/511 (39%), Positives = 300/511 (58%), Gaps = 52/511 (10%)

Query: 115 PSVSSDAFKEDSPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIH 174
           PS S D  +EDS + +W  +       S  E+ L+R AL +A +AH  Q R SGEP++ H
Sbjct: 9   PSPSHD--REDS-KSIW--IASLAEGRSEEEIALIRTALEIADKAHVEQLRASGEPYLTH 63

Query: 175 PVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLG 234
            + VA I+  L LD ESIAA +LHD VEDT + T E++ E+ G  V  +V+G TK+S +G
Sbjct: 64  AMAVADIVAGLRLDHESIAAAILHDVVEDTGI-TLEQVAEQCGQAVAHLVDGVTKMSYIG 122

Query: 235 KLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIAT 294
             +        + +KA+ LR++ LAM E+VRV+++KLADRLHNMRTL H+P  KQ  IA 
Sbjct: 123 DYQLNGAQQGKEQIKAESLRKLLLAMAEDVRVVMIKLADRLHNMRTLKHLPEEKQRRIAR 182

Query: 295 ETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKIL 354
           ET+ ++APLA  LG++QIK ELE+LSF Y +   Y +V R + +   + +  ++    IL
Sbjct: 183 ETMDIYAPLANRLGIWQIKWELEDLSFRYLDPVTYKQVARFLDERRVDRQGYIDNVIGIL 242

Query: 355 MKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRG-SINEVNQIAQLRIIIKPKPCS 413
            K+      LD   VK +I+   K  +SI+K  +K++G S +++  +  +R+++      
Sbjct: 243 EKQ------LDKAGVKADIKGRPKHLFSIWKK-MKNKGLSFHDLYDVRAVRVLVDSVAD- 294

Query: 414 GVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRL 473
                      CYHVLG+VH +W  IP+   DYIATPK N YQS+HT ++    ++   L
Sbjct: 295 -----------CYHVLGVVHSLWPHIPKEFDDYIATPKENNYQSIHTAVVGPGGKT---L 340

Query: 474 EVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWL 533
           EVQIRT EMD  AE G+AAH+             +  GR  +G            +I+WL
Sbjct: 341 EVQIRTWEMDKHAELGVAAHW-----------RYKEGGRHDKG---------FEQKIAWL 380

Query: 534 NAIREWQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTE 593
             + +W+EE      + +F+D    ++   RV++ TP GE+ +LP+GAT +D+AY +HTE
Sbjct: 381 RQLLDWKEE---EANAGDFIDRFKSEVFQDRVYILTPNGEVFDLPQGATPLDFAYYVHTE 437

Query: 594 IGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
           +GN+   AKVNG +V  T+ L + E VE++T
Sbjct: 438 VGNRCRGAKVNGRIVPLTYELKSGEQVEVLT 468


>gi|167746626|ref|ZP_02418753.1| hypothetical protein ANACAC_01337 [Anaerostipes caccae DSM 14662]
 gi|167653586|gb|EDR97715.1| RelA/SpoT family protein [Anaerostipes caccae DSM 14662]
          Length = 758

 Score =  342 bits (877), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 207/512 (40%), Positives = 298/512 (58%), Gaps = 72/512 (14%)

Query: 126 SPERLWEDLRPTISYL-SPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
           +P+ L + L  T+  L S  ++E+V RA  +AFEAH  QKR+SGEP+IIHP+ VA IL E
Sbjct: 24  APDELRQQLMETMKSLYSDEDIEMVSRAYDMAFEAHKDQKRKSGEPYIIHPICVAIILAE 83

Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
           LELD E+I AGLLHD VEDT+V T+E +  EFG  V ++V+G TK+ +L   K K E   
Sbjct: 84  LELDRETIIAGLLHDVVEDTDV-TYEDVVREFGVEVAQLVDGVTKLGQLSYSKDKIE--- 139

Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
              V+A++LR+MFLAM +++RVI++KLADRLHNMRT+  M P KQ   + ET+ ++AP+A
Sbjct: 140 ---VQAENLRKMFLAMAKDIRVILIKLADRLHNMRTMQFMKPEKQKEKSRETMDIYAPIA 196

Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEAN---KILMKKIEDD 361
             LG+ +IK EL++LS  Y              D+YKE E  L+      +  +K+I D+
Sbjct: 197 HRLGISKIKVELDDLSLRYLK-----------PDVYKELEHSLDSQKVRREAYIKEIVDE 245

Query: 362 --QFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLC 419
               ++   +K EI    K  +SIYK ++    +++++  +  +RI +            
Sbjct: 246 VSGHIERSGIKAEIDGRVKHFFSIYKKMVNQNKTLDQIYDLFAVRIKV------------ 293

Query: 420 SPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLE 474
              + CY  LG++H ++ PIP   KDYIA PK N YQSLHTTLI     PF        E
Sbjct: 294 DTVKDCYAALGVIHEMYKPIPGRFKDYIAMPKQNMYQSLHTTLIGPEGHPF--------E 345

Query: 475 VQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLN 534
           +QIRT EM  IAE GIAAH+  +                 +  +V +N      ++SWL 
Sbjct: 346 IQIRTFEMHRIAEYGIAAHWKYK----------------EKSSSVGVNKEE--EKLSWLR 387

Query: 535 AIREWQEEFVGNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHT 592
            I EWQ++   N   +EF+  +    DL   +V+ FTP G++K+L  G+T +D+AY IH+
Sbjct: 388 EILEWQQDMDDN---KEFLSLLKTNLDLFAEQVYCFTPNGDVKSLANGSTPIDFAYSIHS 444

Query: 593 EIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
            +GN MV A+VNG  V   + L N + VE+IT
Sbjct: 445 AVGNTMVGARVNGRQVPFEYHLQNGDRVEVIT 476


>gi|431794423|ref|YP_007221328.1| RelA/SpoT family (p)ppGpp synthetase [Desulfitobacterium
           dichloroeliminans LMG P-21439]
 gi|430784649|gb|AGA69932.1| (p)ppGpp synthetase, RelA/SpoT family [Desulfitobacterium
           dichloroeliminans LMG P-21439]
          Length = 729

 Score =  342 bits (877), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 194/483 (40%), Positives = 286/483 (59%), Gaps = 50/483 (10%)

Query: 142 SPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTV 201
           SP  ++LV +A   A EAH GQ R SGE +I HP+EVA+IL ELE+D  +IAA  LHD V
Sbjct: 14  SPEGIKLVEKAYSFAEEAHRGQLRNSGEEYIQHPLEVAKILLELEMDEATIAAAFLHDVV 73

Query: 202 EDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMT 261
           EDT   + E IE+EFG+ V  +V+G   V+KLG+++ K    S ++++ ++LR+MFLAM 
Sbjct: 74  EDTKY-SVEDIEKEFGSQVALLVDG---VTKLGRIEYK----SKEELQVENLRKMFLAMA 125

Query: 262 EEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSF 321
           +++RVI++KLADRLHNMRTL      KQ  IA ET+++FAPLA  LG+++IK ELE+LSF
Sbjct: 126 KDIRVILIKLADRLHNMRTLKFHSEKKQKEIAQETIEIFAPLANRLGIFRIKWELEDLSF 185

Query: 322 MYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPY 381
            Y   ++Y  +   +A    E E ++ E    L  ++ +      + ++ +I    K  Y
Sbjct: 186 RYLKPQEYYDLSEGIALKRAEREVQINEVITQLRSRLSE------VGIRADISGRPKHFY 239

Query: 382 SIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPR 441
           SIY+ ++     ++E+  +  +R+I+                 CY  LG++H +W P+P 
Sbjct: 240 SIYRKMINQHKELSEIYDLTAVRVIV------------DSVNDCYGALGIIHTLWKPLPG 287

Query: 442 AMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVT 501
             KDYIA PKPN YQSLHTTL+    E     E+QIRT EM   AE GIAAH+  +    
Sbjct: 288 RFKDYIAMPKPNMYQSLHTTLVGAHGEP---FEIQIRTWEMHRTAEYGIAAHWKYK---- 340

Query: 502 GLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLL 561
              G  RP G             N   ++SWL  + EWQ +   +  + EF++++  DL 
Sbjct: 341 --EGAGRPAG------------GNFEQKLSWLRQLLEWQHD---SRDAGEFMESLKIDLF 383

Query: 562 GSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVE 621
              VFVFTP+G++  LP G+  VD+AY +HT++G++ V AK+N  +V     L N ++VE
Sbjct: 384 ADTVFVFTPKGDVVELPAGSCPVDFAYRVHTDVGHRCVGAKINSRIVPLETKLTNGDIVE 443

Query: 622 IIT 624
           I+T
Sbjct: 444 ILT 446


>gi|422344010|ref|ZP_16424937.1| hypothetical protein HMPREF9432_00997 [Selenomonas noxia F0398]
 gi|355377758|gb|EHG24967.1| hypothetical protein HMPREF9432_00997 [Selenomonas noxia F0398]
          Length = 743

 Score =  342 bits (877), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 197/490 (40%), Positives = 291/490 (59%), Gaps = 50/490 (10%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           SY +  +LE +++A   A +AH GQ R SG+ +I+HP+ VA IL  L LD E+I A LLH
Sbjct: 20  SYQADADLEKIKKAYSFAEQAHRGQVRISGDAYIMHPLNVAYILTGLHLDDETICAALLH 79

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT+  T E +E EFG  +  +++G   V+KLG++    E  S +DVK ++ R+MFL
Sbjct: 80  DVVEDTHA-TLEEMEAEFGRNIMALIDG---VTKLGRI----EYMSKEDVKLENYRKMFL 131

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM +++RVI++KLADRLHNMRTL +M   K+  IA ET++V+APLA  LG+  IK ELE+
Sbjct: 132 AMAKDIRVIMIKLADRLHNMRTLKYMREDKRRRIAKETIEVYAPLANRLGISSIKVELED 191

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
           L   Y   E Y  +   V    +E ++ + ++ + + +K+E         +K EI+   K
Sbjct: 192 LCLRYLEPEAYYALVEEVKHKRQERQEFILDSIQKIHEKLE------AADIKAEIKGRAK 245

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIY+ + +   S+NE+  ++ +RI            L S  + CY VLG++H +W P
Sbjct: 246 HFYSIYRKMKRDNKSVNEIYDLSAVRI------------LVSSVKDCYGVLGVIHAMWKP 293

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           IP   KDYIA PK NGYQSLHTT++   Y     LE+QIRTE M  I+E G+AAH+  + 
Sbjct: 294 IPGRFKDYIAMPKSNGYQSLHTTVMTRGYP----LEIQIRTEAMHRISEFGVAAHWKYK- 348

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                            G+++ + + N   ++SWL  +   Q+E+      +EF + +  
Sbjct: 349 ---------------EAGRSIGVTDEN-DQKMSWLRQMVSLQKEY---DDPKEFFEALKL 389

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           D+    VFVFTPRG++ +LPKG+  +D+AY IHTEIG+  V AKVNG +V   + L N +
Sbjct: 390 DVFSDEVFVFTPRGDVIDLPKGSNPIDFAYHIHTEIGHHCVGAKVNGKIVPLEYKLKNGD 449

Query: 619 VVEIITYNVS 628
           +V I+T   S
Sbjct: 450 IVSIVTNKAS 459


>gi|172039304|ref|YP_001805805.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [Cyanothece sp.
           ATCC 51142]
 gi|354552428|ref|ZP_08971736.1| (p)ppGpp synthetase I, SpoT/RelA [Cyanothece sp. ATCC 51472]
 gi|171700758|gb|ACB53739.1| probable guanosine-3',5'-bis(diphosphate) 3'-diphosphatase,
           (ppGpp)ase [Cyanothece sp. ATCC 51142]
 gi|353555750|gb|EHC25138.1| (p)ppGpp synthetase I, SpoT/RelA [Cyanothece sp. ATCC 51472]
          Length = 744

 Score =  342 bits (877), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 201/484 (41%), Positives = 282/484 (58%), Gaps = 49/484 (10%)

Query: 142 SPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTV 201
           S  +L+L+ RA   A++ H+GQ R+SGEP+I HPV VA IL +L  D   IAAG LHD V
Sbjct: 32  SNQDLDLICRAFNFAYKLHEGQTRKSGEPYIAHPVAVAGILRDLGGDKAMIAAGFLHDVV 91

Query: 202 EDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMT 261
           EDT+V T E IEE FG  V  +VEG TK+SK      K E       +A++ R+MFLAM 
Sbjct: 92  EDTDV-TVEEIEEMFGQEVALLVEGVTKLSKFN-FSNKTEQ------QAENFRRMFLAMA 143

Query: 262 EEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSF 321
            ++RVI+VKLADRLHNMRTL  + P KQ  IA ET ++FAPLA  LG++++K ELE+LSF
Sbjct: 144 RDIRVIVVKLADRLHNMRTLEPLRPEKQKRIARETKEIFAPLANRLGIWRVKWELEDLSF 203

Query: 322 MYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT-EIRSVCKEP 380
            Y   EDY +++  V++   + E  +E    IL K+++D      M ++  E++   K  
Sbjct: 204 KYLEPEDYREIQNFVSEKRIDRETRIETVKNILQKRLDD------MGIQVLELQGRPKHL 257

Query: 381 YSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIP 440
           Y IY  + +     +E+  +A LRII+K              + CY  L +VH ++ P+P
Sbjct: 258 YGIYFKMQRQNKGFHEIYDLAALRIIVK------------TNEECYRALAVVHDVFKPMP 305

Query: 441 RAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFV 500
              KDYI  PKPN YQSLHTT++     +   LE+QIRT EM  IAE GIAAH+  +   
Sbjct: 306 GRFKDYIGLPKPNRYQSLHTTVVGL---NGRPLEIQIRTLEMHHIAEYGIAAHWKYK--E 360

Query: 501 TGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDL 560
           TG   H               + +N   + +WL  + +WQ++       +E+V+ +  +L
Sbjct: 361 TGGSNHT--------------HFSNEDEKFTWLRQLLDWQKDL---KDDQEYVENLKDNL 403

Query: 561 LGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVV 620
               V+VFTP G++  L +GAT VD+AY IHTE+GN M  A++NG        L N ++V
Sbjct: 404 FDDDVYVFTPDGDVIALSRGATAVDFAYRIHTEVGNHMKGARINGKWSVLDQPLHNGDIV 463

Query: 621 EIIT 624
           EIIT
Sbjct: 464 EIIT 467


>gi|317471454|ref|ZP_07930806.1| RelA/SpoT family protein [Anaerostipes sp. 3_2_56FAA]
 gi|316901069|gb|EFV23031.1| RelA/SpoT family protein [Anaerostipes sp. 3_2_56FAA]
          Length = 904

 Score =  342 bits (877), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 207/512 (40%), Positives = 298/512 (58%), Gaps = 72/512 (14%)

Query: 126 SPERLWEDLRPTISYL-SPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
           +P+ L + L  T+  L S  ++E+V RA  +AFEAH  QKR+SGEP+IIHP+ VA IL E
Sbjct: 170 APDELRQQLMETMKSLYSDEDIEMVSRAYDMAFEAHKDQKRKSGEPYIIHPICVAIILAE 229

Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
           LELD E+I AGLLHD VEDT+V T+E +  EFG  V ++V+G TK+ +L   K K E   
Sbjct: 230 LELDRETIIAGLLHDVVEDTDV-TYEDVVREFGVEVAQLVDGVTKLGQLSYSKDKIE--- 285

Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
              V+A++LR+MFLAM +++RVI++KLADRLHNMRT+  M P KQ   + ET+ ++AP+A
Sbjct: 286 ---VQAENLRKMFLAMAKDIRVILIKLADRLHNMRTMQFMKPEKQKEKSRETMDIYAPIA 342

Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEAN---KILMKKIEDD 361
             LG+ +IK EL++LS  Y              D+YKE E  L+      +  +K+I D+
Sbjct: 343 HRLGISKIKVELDDLSLRYLK-----------PDVYKELEHSLDSQKVRREAYIKEIVDE 391

Query: 362 --QFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLC 419
               ++   +K EI    K  +SIYK ++    +++++  +  +RI +            
Sbjct: 392 VSGHIERSGIKAEIDGRVKHFFSIYKKMVNQNKTLDQIYDLFAVRIKV------------ 439

Query: 420 SPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLE 474
              + CY  LG++H ++ PIP   KDYIA PK N YQSLHTTLI     PF        E
Sbjct: 440 DTVKDCYAALGVIHEMYKPIPGRFKDYIAMPKQNMYQSLHTTLIGPEGHPF--------E 491

Query: 475 VQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLN 534
           +QIRT EM  IAE GIAAH+  +                 +  +V +N      ++SWL 
Sbjct: 492 IQIRTFEMHRIAEYGIAAHWKYK----------------EKSSSVGVNKEE--EKLSWLR 533

Query: 535 AIREWQEEFVGNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHT 592
            I EWQ++   N   +EF+  +    DL   +V+ FTP G++K+L  G+T +D+AY IH+
Sbjct: 534 EILEWQQDMDDN---KEFLSLLKTNLDLFAEQVYCFTPNGDVKSLANGSTPIDFAYSIHS 590

Query: 593 EIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
            +GN MV A+VNG  V   + L N + VE+IT
Sbjct: 591 AVGNTMVGARVNGRQVPFEYHLQNGDRVEVIT 622


>gi|357054508|ref|ZP_09115592.1| hypothetical protein HMPREF9467_02564 [Clostridium clostridioforme
           2_1_49FAA]
 gi|355384480|gb|EHG31545.1| hypothetical protein HMPREF9467_02564 [Clostridium clostridioforme
           2_1_49FAA]
          Length = 761

 Score =  342 bits (877), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 201/507 (39%), Positives = 297/507 (58%), Gaps = 61/507 (12%)

Query: 126 SPERLWEDLRPTISYLSP-NELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
           SPE L++DL  TI    P +++ ++ +A  +A EAH  QKR+SGEP+IIHP+ VA IL +
Sbjct: 22  SPEVLYQDLINTIRKYHPSDDITMIEKAYRIADEAHKEQKRKSGEPYIIHPLCVAIILAD 81

Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
           LE+D E+IAAGLLHD VEDT ++T E++ +EFG+ V  +V+G TK+++L   K K E   
Sbjct: 82  LEMDKETIAAGLLHDVVEDT-IMTLEQLTKEFGSEVSFLVDGVTKLTQLNWDKDKVE--- 137

Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
              ++AD+LR+MFLAM +++RVII+KLADRLHNMRT  +  P KQ   A ET++++AP+A
Sbjct: 138 ---IQADNLRKMFLAMAKDIRVIIIKLADRLHNMRTGQYWKPEKQKEKARETMEIYAPIA 194

Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
             LG+ +IK EL++LS  +   + Y  +  +VA      E  ++E    +   +ED    
Sbjct: 195 DRLGISKIKIELDDLSLKFLQPDVYYDLVEKVALRKDTREAFVQEIVDEVKSHMED---- 250

Query: 365 DLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
               ++  +    K  +SIYK ++    +++++  +  +RI+++              + 
Sbjct: 251 --AGIEATVGGRVKHFFSIYKKMVNQNKTLDQIYDLFAVRIMVE------------TVKD 296

Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRT 479
           CY  LG++H ++ PIP   KDYIA PK N YQSLHTTLI     PF        E+QIRT
Sbjct: 297 CYAALGVIHEMYKPIPGRFKDYIAMPKQNMYQSLHTTLIGSNGQPF--------EIQIRT 348

Query: 480 EEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREW 539
            EM   AE GIAAH+  +   +G V                        ++SWL  I EW
Sbjct: 349 YEMHRTAEYGIAAHWKYKESGSGQVAAGSAEA-----------------KLSWLRQILEW 391

Query: 540 QEEFVGNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNK 597
           Q +      S+EF+  +    DL    V+ FTP G++K LP G+T +D+AY IH+ +GNK
Sbjct: 392 QRD---TDDSKEFLSMVKGDLDLFSDSVYCFTPSGDVKTLPSGSTPIDFAYCIHSAVGNK 448

Query: 598 MVAAKVNGNLVSPTHVLANAEVVEIIT 624
           MV A+VNG LV   +V+ N + +EIIT
Sbjct: 449 MVGARVNGKLVPIEYVIQNGDQLEIIT 475


>gi|312880418|ref|ZP_07740218.1| (p)ppGpp synthetase I, SpoT/RelA [Aminomonas paucivorans DSM 12260]
 gi|310783709|gb|EFQ24107.1| (p)ppGpp synthetase I, SpoT/RelA [Aminomonas paucivorans DSM 12260]
          Length = 760

 Score =  342 bits (877), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 202/485 (41%), Positives = 293/485 (60%), Gaps = 52/485 (10%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           YL   +L  +  AL+ A EAH  QKR SGEP+++H + VA IL ++ELD E+++A LLHD
Sbjct: 59  YLDKEDLLRLGEALVFAAEAHREQKRHSGEPYVVHTISVASILADMELDVETLSAALLHD 118

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            +EDT V     ++E FG  V  +V+G   V+KLGKL  K    S++D +A++LR+MFL 
Sbjct: 119 VLEDTPVGDAV-LKERFGPEVLTLVDG---VTKLGKLPFK----SIEDYQAENLRKMFLV 170

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M +++RV+++KLADRLHNMRTL      +Q +IA ETL+++APLA  LG+YQ+K ELE+L
Sbjct: 171 MAKDIRVVLIKLADRLHNMRTLQAHRRDRQLAIAKETLEIYAPLAHRLGIYQVKRELEDL 230

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           SF   + E Y +++RRV     E E  +++A  IL +++ ++       V+  +    K 
Sbjct: 231 SFKILDPEIYYEIRRRVRKKLPEREAIIKQALDILQQRLLEE------GVEASLNGRPKH 284

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIY+ + +   S++++  +  LR++        VG L      CY VLGLVH IW PI
Sbjct: 285 FYSIYEKMRRKNLSLDQLYDLLALRVV--------VGGLAE----CYQVLGLVHTIWKPI 332

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P    DYIA PK N YQSLHTT+   L  S   LEVQIRT EM  +AE GIAAH+  +  
Sbjct: 333 PGQFDDYIANPKSNMYQSLHTTV---LGPSGEPLEVQIRTWEMHRLAEYGIAAHWHYK-- 387

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
                G  R N               +  R++W+  + E Q++        EF+D +  D
Sbjct: 388 ----EGKQRVN--------------QLDRRLTWIRQVLESQQD---GSEPTEFLDNLKTD 426

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           +L S V VFTP+GE+ ++P G+T +D+AY IHTE+G++ V A VNG +V   HVL+N ++
Sbjct: 427 VLSSEVLVFTPKGEVVSVPHGSTPIDFAYTIHTEVGHRCVGAMVNGRIVPMDHVLSNGDI 486

Query: 620 VEIIT 624
           V I+T
Sbjct: 487 VRILT 491


>gi|315303282|ref|ZP_07873919.1| GTP diphosphokinase [Listeria ivanovii FSL F6-596]
 gi|313628349|gb|EFR96845.1| GTP diphosphokinase [Listeria ivanovii FSL F6-596]
          Length = 738

 Score =  342 bits (876), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 193/490 (39%), Positives = 293/490 (59%), Gaps = 50/490 (10%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++   L LV++A   A ++H  Q R+SGEP+IIHP++VA IL EL++D  ++A+G LHD
Sbjct: 19  YMNQEHLALVKKAYEFARDSHKEQFRKSGEPYIIHPIQVAGILVELKMDPSTVASGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            VEDT  VT   +EE FG+ V  +V+G   V+KLGK+K K    S ++ +A++ R+MF+A
Sbjct: 79  VVEDT-PVTLADLEEAFGSEVAMLVDG---VTKLGKIKYK----SHEEQQAENHRKMFIA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M +++RVI++KLADRLHNMRTL H+P  KQ  IA ETL++FAPLA  LG+ ++K ELE+ 
Sbjct: 131 MAQDIRVILIKLADRLHNMRTLKHLPVEKQRRIANETLEIFAPLAHRLGISRVKWELEDT 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           +  Y N + Y     R+  L K+     E     ++  + ++  LD + ++ +I    K 
Sbjct: 191 ALRYLNPQQYY----RIVHLMKQKRDARERYLNDVIDGVNEN--LDELNIQADISGRPKH 244

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIY+ + +     NE+  +  +RI++            S  + CY VLG++H  W P+
Sbjct: 245 IYSIYRKMTEQNKQFNEIYDLLAVRIVV------------SSIKDCYAVLGIIHTRWKPM 292

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDY+A PK N YQS+HTT+I    E    LEVQIRT EM  IAE G+AAH+     
Sbjct: 293 PGRFKDYVAMPKSNMYQSIHTTVIGPQGEP---LEVQIRTHEMHQIAEYGVAAHW----- 344

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
                  A   G+    KT   N      +++W   I E+Q E   +  + EF++++  D
Sbjct: 345 -------AYKEGKVVNSKTSFDN------KLTWFREILEYQNE---SDNAEEFMESLKLD 388

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           L    V+VFTP+G++  LP G+  +D+AY +HTEIGNK + AK+NG +V+  + L   ++
Sbjct: 389 LFSDVVYVFTPKGDVYELPNGSVPLDFAYRVHTEIGNKTIGAKINGKIVTLDYKLKTGDI 448

Query: 620 VEIITYNVSF 629
           ++I+T   S+
Sbjct: 449 IDILTSKHSY 458


>gi|225568638|ref|ZP_03777663.1| hypothetical protein CLOHYLEM_04716 [Clostridium hylemonae DSM
           15053]
 gi|225162566|gb|EEG75185.1| hypothetical protein CLOHYLEM_04716 [Clostridium hylemonae DSM
           15053]
          Length = 793

 Score =  342 bits (876), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 197/505 (39%), Positives = 302/505 (59%), Gaps = 54/505 (10%)

Query: 125 DSPERLWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILG 183
           + P++L++ L   I    P+ ++ ++ +A   A +AH  Q R+SGEP+I+HP+ VA IL 
Sbjct: 54  EDPDQLYDMLIARIRKYHPSTDVSMIEKAYETARKAHGDQCRKSGEPYIVHPLWVAIILA 113

Query: 184 ELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENH 243
            LE+D E+IAAG+LHD VEDT+V + E I++ FG  V  +V+G   V+KLG+L   ++  
Sbjct: 114 NLEMDKETIAAGMLHDVVEDTSV-SEEEIKKNFGEEVALLVDG---VTKLGRLSYSSDKL 169

Query: 244 SVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPL 303
            VQ   A++LR+MFLAM +++RVII+KLADRLHNMRTL  M P KQ   A ET+ ++AP+
Sbjct: 170 EVQ---AENLRKMFLAMAKDIRVIIIKLADRLHNMRTLQFMTPAKQKEKAKETMDIYAPI 226

Query: 304 AKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDD-- 361
           A+ LG+ +IK+EL++L+  Y+  E +  +  ++     E E+         +++I D+  
Sbjct: 227 AQRLGISKIKTELDDLALKYSQPEVFFDLVNQINSRKTEREE--------FVQQIVDEVS 278

Query: 362 QFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSP 421
             +    +K ++    K  +SIYK ++    +++++  +  +RII+              
Sbjct: 279 THMKNANIKADVNGRVKHFFSIYKKMVNQEKTVDQIYDLFAVRIIV------------DS 326

Query: 422 QQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEE 481
            + CY  LG++H ++TPIP   KDYIA PKPN YQSLHTTL+  + +     E+QIRTEE
Sbjct: 327 VKDCYAALGVIHEMYTPIPGRFKDYIAMPKPNMYQSLHTTLMSSVGQP---FEIQIRTEE 383

Query: 482 MDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQE 541
           M   AE GIAAH+  +               S  GK      A    ++SWL  I EWQ 
Sbjct: 384 MHKTAEYGIAAHWKYK--------------ESNDGKKSV--QAQEEEKLSWLRQILEWQR 427

Query: 542 EFVGNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMV 599
           +   N   REF++ +    DL    V+ FTP+G++KNLP G+T +D+AY IH+ +GNKMV
Sbjct: 428 DMSDN---REFLNLLKGDLDLFAEDVYCFTPQGDVKNLPNGSTPIDFAYAIHSAVGNKMV 484

Query: 600 AAKVNGNLVSPTHVLANAEVVEIIT 624
            A+VNG LV+  + + N + +EI+T
Sbjct: 485 GARVNGKLVNIDYKIQNGDRIEILT 509


>gi|310658609|ref|YP_003936330.1| GTP pyrophosphokinase [[Clostridium] sticklandii]
 gi|308825387|emb|CBH21425.1| GTP pyrophosphokinase [[Clostridium] sticklandii]
          Length = 729

 Score =  342 bits (876), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 196/496 (39%), Positives = 305/496 (61%), Gaps = 51/496 (10%)

Query: 130 LWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
           + E+L   I   +P+ +L++V +A   A+ AH+GQ R+SGE +IIHP+EVA+IL ELELD
Sbjct: 1   MLENLLLMIEQYNPDADLDIVIKAYNYAYNAHEGQYRKSGEKYIIHPLEVAKILAELELD 60

Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
             +IAAGL+HD VEDT V +F  IE  FG  V  +V+G   V+KLGK++ K    S ++ 
Sbjct: 61  VFTIAAGLMHDVVEDTEV-SFSDIERLFGTEVAELVDG---VTKLGKIEYK----SKEET 112

Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
           +A++LR+MF+AM +++RVI++KLADRLHNMRTL +M   K    ATET++++AP+A  LG
Sbjct: 113 QAENLRKMFMAMGKDIRVILIKLADRLHNMRTLKYMSEEKAKEKATETIEIYAPIAHRLG 172

Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
           + ++K E+E+++  Y + E Y  +  +V+   +E E  ++    +L  K+E+        
Sbjct: 173 ISRVKWEMEDIALRYLDPEGYYDLIEKVSKKRREREAYIQGVIDLLKNKLEE------AN 226

Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
           ++ +I+   K  YSIY+ +     S  E+  +  +RI            L    + CY V
Sbjct: 227 IEGDIKGRAKHFYSIYRKMKYQSKSFEEIYDLMAVRI------------LVDSLKDCYGV 274

Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAER 488
           +G+VH IW P+P   KDYIA PKPN YQSLHTT++    E    LE+QIRT+EM   AE 
Sbjct: 275 VGIVHTIWKPMPGRFKDYIAMPKPNMYQSLHTTVLGPDGEP---LEIQIRTKEMHRTAEF 331

Query: 489 GIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMT 548
           GIAAH+                 +   GK +  N +++  ++SWL  + EWQ++ V + T
Sbjct: 332 GIAAHW-----------------KYKEGK-IDPNESDMDKKLSWLRQMMEWQKD-VSDPT 372

Query: 549 SREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLV 608
             EF++++  DL  ++VFVFTP+G++  LP  +T +D+AY +H+ +GN+ + AKV+G +V
Sbjct: 373 --EFMESLKIDLFVNQVFVFTPKGDVIELPAESTPLDFAYKVHSGVGNRCIGAKVDGRIV 430

Query: 609 SPTHVLANAEVVEIIT 624
              + L N  +VE++T
Sbjct: 431 PLDYKLKNGNIVEVMT 446


>gi|322437264|ref|YP_004219476.1| (p)ppGpp synthetase I SpoT/RelA [Granulicella tundricola MP5ACTX9]
 gi|321164991|gb|ADW70696.1| (p)ppGpp synthetase I, SpoT/RelA [Granulicella tundricola MP5ACTX9]
          Length = 826

 Score =  342 bits (876), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 196/481 (40%), Positives = 280/481 (58%), Gaps = 52/481 (10%)

Query: 144 NELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVED 203
           ++LE++RRA     + H GQ R SGEP+IIHP+EV +IL +L++D  +IAAGLLHD VED
Sbjct: 109 DDLEIIRRAWAFCIQQHAGQLRASGEPYIIHPLEVCQILADLKMDSTAIAAGLLHDAVED 168

Query: 204 TNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEE 263
           T+V + E I + F   V  IVEG   V+KL K+K  N     +D +A+++R+M LAM  +
Sbjct: 169 TDVTSPE-IAKRFNEQVAHIVEG---VTKLDKIKFANR----EDHQAENIRKMLLAMVTD 220

Query: 264 VRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMY 323
           VRV+I+KLADRLHNMRTL H+ P KQ  IA ETL ++APLA  LGM +++ ELE+L+F Y
Sbjct: 221 VRVVIIKLADRLHNMRTLEHLKPEKQQKIARETLDIYAPLAHRLGMGKLRGELEDLAFRY 280

Query: 324 TNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSI 383
           T+   Y +V + V  L   +E+ L    + +  K+ +        +   + S  K  YSI
Sbjct: 281 TDPYAYLQVAQEVEHLRDANEETLTNIVETVRGKLAE------AGIDGRVESRIKRLYSI 334

Query: 384 YKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAM 443
            + +   +  +++V  +  +R+I     C  VG        CY V G++  +W P+P   
Sbjct: 335 QQKLTAQKIPVDQVYDLLAVRVI-----CHTVGE-------CYAVFGILQNLWRPVPGRF 382

Query: 444 KDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGL 503
           KD+IATP+PN YQSLHTTL   +     + EVQIRTEEM  IAE GIAAH+         
Sbjct: 383 KDFIATPRPNLYQSLHTTL---MAPGGHQFEVQIRTEEMHRIAEEGIAAHW--------- 430

Query: 504 VGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGS 563
                      + K     +A    R++W+  + EWQ E        EF+ T+  DL   
Sbjct: 431 -----------KYKANDAVSAKDEQRLAWVRQLMEWQREMT---DPNEFMSTLKIDLYPE 476

Query: 564 RVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEII 623
            V+ FTP+G++  LPK A+ +D++Y IHTE+GN  + AKVNG +V     L N ++VEI 
Sbjct: 477 EVYTFTPKGKVVVLPKDASPIDFSYAIHTEVGNTTIGAKVNGRIVPLRTKLRNGDIVEIS 536

Query: 624 T 624
           T
Sbjct: 537 T 537


>gi|374300791|ref|YP_005052430.1| (p)ppGpp synthetase I SpoT/RelA [Desulfovibrio africanus str.
           Walvis Bay]
 gi|332553727|gb|EGJ50771.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfovibrio africanus str.
           Walvis Bay]
          Length = 716

 Score =  342 bits (876), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 204/497 (41%), Positives = 295/497 (59%), Gaps = 54/497 (10%)

Query: 129 RLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
           R+ E +   +SY     + L+++A + A  AH GQ R SGEP++ HP+EVA IL ++ LD
Sbjct: 3   RIHEIIDKVLSYHPEPNVALIQKAYVFAAAAHAGQTRLSGEPYMSHPLEVANILADMRLD 62

Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
             +I + LLHDTVEDT   T + IE +FG  V  IV+G TK+SK+   + K +       
Sbjct: 63  EFAIVSALLHDTVEDTKA-TVDEIESKFGKEVAHIVDGVTKISKM-TFETKAQ------A 114

Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
           +A+++R+M +AM E++RVI++KLADRLHNMRTL      KQ  IA ETL ++APLA  LG
Sbjct: 115 QAENIRKMIVAMAEDIRVIMIKLADRLHNMRTLDFQKSEKQKRIAQETLDIYAPLANRLG 174

Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIE-DDQFLDLM 367
           ++ IK+ELE+L FMYT  + Y ++K+ V     EH +++   ++ + K I+  +  L   
Sbjct: 175 LHFIKTELEDLCFMYTRPDAYGQLKKGV-----EHYQDI--GHEYIAKVIDLLNDMLGRN 227

Query: 368 TVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYH 427
            +K  +    K  YSI+  +L+   ++++V  +   R+I+            S  + CY 
Sbjct: 228 KIKGRVLGRTKHLYSIHNKMLQQSLTLDQVYDLMAFRVIV------------STIRDCYA 275

Query: 428 VLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAE 487
           VLG VH IW P+P   KDYI+ PKPN YQSLHTT+I    E   R+E+QIRTEEM  +AE
Sbjct: 276 VLGEVHSIWKPVPGRFKDYISMPKPNMYQSLHTTVIGPDGE---RIEIQIRTEEMHRLAE 332

Query: 488 RGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNM 547
            G+AAH+           +    G  PR             R SWL  I +WQ+E     
Sbjct: 333 YGVAAHWQ----------YKEGGGGKPRD----------VERFSWLREILDWQKE---TR 369

Query: 548 TSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNL 607
             REF+ ++  DL   +V+VFTPRG++K+LP+GAT VD+AYM+H+E+G+    AKVNG L
Sbjct: 370 DPREFMRSLRVDLSEDQVYVFTPRGDVKSLPEGATPVDFAYMVHSEVGDHCAGAKVNGRL 429

Query: 608 VSPTHVLANAEVVEIIT 624
           V  +  L N + VE+IT
Sbjct: 430 VPLSTKLKNGDTVEVIT 446


>gi|373494894|ref|ZP_09585491.1| hypothetical protein HMPREF0380_01129 [Eubacterium infirmum F0142]
 gi|371967256|gb|EHO84728.1| hypothetical protein HMPREF0380_01129 [Eubacterium infirmum F0142]
          Length = 733

 Score =  342 bits (876), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 196/505 (38%), Positives = 299/505 (59%), Gaps = 63/505 (12%)

Query: 125 DSPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
           ++  +  E+L+      +P   E++  A  +A + H+GQ R+SGEP+ IHP+ VA IL +
Sbjct: 2   ETKAQFLEELKKYNDNYNP---EVIGAAFDMAHKLHEGQLRKSGEPYFIHPIAVAIILAQ 58

Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
           L +D  +I  GLLHD VEDT   T E +  +FG  V  +V+G   V+KLG +K   +   
Sbjct: 59  LGMDEATIVGGLLHDVVEDTEY-TREMLVNDFGEEVAVLVDG---VTKLGSIKFDTK--- 111

Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
            ++ +A++LR+MF AM++++RV+I+KLADRLHNMRT  +    KQ   + ETL ++APLA
Sbjct: 112 -EEAQAENLRKMFFAMSKDIRVLIIKLADRLHNMRTAEYWSESKQKEKSRETLDIYAPLA 170

Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
             LG++ +K ELE+ +  Y + ++Y  +KR V++  ++ EK +      ++++I  +  L
Sbjct: 171 SRLGIFTVKFELEDTALKYLHPQEYETLKREVSEKREQREKVINS----VIERISTN--L 224

Query: 365 DLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
           + + +  +I    K  YSIYK ++     ++E+  +  +R+I+               + 
Sbjct: 225 EQLNLHFDISGRSKHLYSIYKKMVLQNKQLDEIFDLTAVRVIV------------DSVKD 272

Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRT 479
           CY VLGLVH +W PIPR  KDYIA PKPN YQSLHTT+I     PF        E+QIRT
Sbjct: 273 CYAVLGLVHTMWKPIPRRFKDYIAMPKPNMYQSLHTTVIGDNGEPF--------EIQIRT 324

Query: 480 EEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREW 539
            EM  +AE GIAAH+                 +   GK+    N N  L+++WL    EW
Sbjct: 325 FEMHKVAEYGIAAHW-----------------KYKEGKSDSKQN-NEDLKLAWLRQTLEW 366

Query: 540 QEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMV 599
           Q+E       +EF++T+  DL  S+VFVFTP+GE+ +LP G+T +D+A+ IHT++G K V
Sbjct: 367 QQEL---NDPKEFMETLKMDLFSSQVFVFTPKGEVIDLPAGSTPLDFAFKIHTDVGCKCV 423

Query: 600 AAKVNGNLVSPTHVLANAEVVEIIT 624
            AKVNG +V+  H L N ++VEI+T
Sbjct: 424 GAKVNGKMVTIDHQLNNGDIVEIVT 448


>gi|164687521|ref|ZP_02211549.1| hypothetical protein CLOBAR_01162 [Clostridium bartlettii DSM
           16795]
 gi|164603295|gb|EDQ96760.1| RelA/SpoT family protein [Clostridium bartlettii DSM 16795]
          Length = 736

 Score =  342 bits (876), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 196/494 (39%), Positives = 296/494 (59%), Gaps = 51/494 (10%)

Query: 132 EDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWE 190
           +++   I   +PN ++  V +A  LA  AH G  R+SGEP+IIHP+ VA IL +LELD E
Sbjct: 7   QEILDKIKKYAPNADVTPVIKAYELAKSAHAGVFRKSGEPYIIHPIAVANILADLELDME 66

Query: 191 SIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKA 250
            IAAGLLHD VEDT   T+E I+E FG  +  +V+G   V+KLGK+K + +  S    +A
Sbjct: 67  VIAAGLLHDVVEDTPY-TYEDIKELFGKDIADLVDG---VTKLGKIKYQTKEES----QA 118

Query: 251 DDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMY 310
           ++LR+MFLAM +++RVI++KLADRLHNMRTL +MP  K    A ETL+++  +A  +G+ 
Sbjct: 119 ENLRKMFLAMAKDIRVILIKLADRLHNMRTLKYMPEEKAKYKAKETLEIYGGIAHRIGIS 178

Query: 311 QIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVK 370
           +IK ELE+L+  Y + E Y ++  ++     + ++ +++  ++L  K ++      + + 
Sbjct: 179 KIKWELEDLALKYIDPEGYRELAEKITMKRSQRQEYIDKIVRLLQDKFKE------VDID 232

Query: 371 TEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLG 430
            E+    K  YSIYK + K   +  E+  +  +RII+            +  + CY VLG
Sbjct: 233 CEVSGRPKHFYSIYKKMKKKHKTFEEIYDLTAVRIIV------------NTIKDCYAVLG 280

Query: 431 LVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGI 490
           +VH +W P+P   KDYIA PKPN YQSLHTT+I    E    +E+QIRT EM  IAE GI
Sbjct: 281 MVHTMWIPMPGRFKDYIAMPKPNLYQSLHTTVIGPDGEP---VEIQIRTHEMHEIAENGI 337

Query: 491 AAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSR 550
           AAH+  +  +TG                   ++A +  ++ WL  + EW+++        
Sbjct: 338 AAHWKYKEGITG------------------SHDAKMEQKLKWLRQMMEWEKDV---QDPH 376

Query: 551 EFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSP 610
           EF+D +  D+  S+V+VFTPRG++  LP G+T +D+AY +HT +GNK   AK+NG +V  
Sbjct: 377 EFLDALKDDVFNSQVYVFTPRGDVIELPAGSTPIDFAYRVHTNVGNKCTGAKINGKIVPI 436

Query: 611 THVLANAEVVEIIT 624
            + L N E+VE+IT
Sbjct: 437 NYKLQNGEIVEVIT 450


>gi|384160293|ref|YP_005542366.1| GTP pyrophosphokinase (RelA/SpoT) [Bacillus amyloliquefaciens
           TA208]
 gi|384169371|ref|YP_005550749.1| GTP pyrophosphokinase [Bacillus amyloliquefaciens XH7]
 gi|328554381|gb|AEB24873.1| GTP pyrophosphokinase (RelA/SpoT) [Bacillus amyloliquefaciens
           TA208]
 gi|341828650|gb|AEK89901.1| GTP pyrophosphokinase [Bacillus amyloliquefaciens XH7]
          Length = 734

 Score =  341 bits (875), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 195/491 (39%), Positives = 291/491 (59%), Gaps = 50/491 (10%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           +YL   ++  V +A + A +AH  Q R+SGEP+IIHP++VA IL +LE+D  +IA G LH
Sbjct: 18  TYLPEEQIAFVEKAYLYAQDAHREQYRKSGEPYIIHPIQVAGILVDLEMDPSTIAGGFLH 77

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT+V T + ++E F   V  +V+G   V+KLGK+K K    S ++ +A++ R++F+
Sbjct: 78  DVVEDTDV-TLDDLKEAFSEEVAMLVDG---VTKLGKIKYK----SQEEQQAENHRKIFV 129

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM +++RVI++KLADRLHNMRTL H+P  KQ  I+ ETL++FAPLA  LG+ +IK ELE+
Sbjct: 130 AMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRISNETLEIFAPLAHRLGISKIKWELED 189

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
            +  Y N + Y ++   +     E E  ++E    + K++E+      + +K +     K
Sbjct: 190 TALRYLNPQQYYRIVNLMKKKRAERELYVDEVVNEVKKRVEE------VNIKADFSGRPK 243

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIY+ +       NE+  +  +RI+        VG +      CY VLG++H  W P
Sbjct: 244 HIYSIYRKMALQNKQFNEIYDLLAVRIL--------VGSIKD----CYAVLGIIHTCWKP 291

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PKPN YQSLHTT+I    +    LEVQIRT EM  IAE G+AAH+    
Sbjct: 292 MPGRFKDYIAMPKPNMYQSLHTTVIGPKGDP---LEVQIRTFEMHEIAEYGVAAHW---- 344

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                   A   G++          A    ++SW   I E+Q E   +  + EF++++  
Sbjct: 345 --------AYKEGKAAN------EEATFEKKLSWFREILEFQNE---STDAEEFMESLKI 387

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           DL    V+VFTP+G++  LP G+  +D++Y IH+EIGNK + AKVNG +V+  H L   +
Sbjct: 388 DLFSDMVYVFTPKGDVIELPSGSVPIDFSYRIHSEIGNKTIGAKVNGKMVTLDHKLRTGD 447

Query: 619 VVEIITYNVSF 629
           +VEI+T   S+
Sbjct: 448 IVEILTSKHSY 458


>gi|150016418|ref|YP_001308672.1| (p)ppGpp synthetase I SpoT/RelA [Clostridium beijerinckii NCIMB
           8052]
 gi|149902883|gb|ABR33716.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium beijerinckii NCIMB
           8052]
          Length = 738

 Score =  341 bits (875), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 195/480 (40%), Positives = 285/480 (59%), Gaps = 43/480 (8%)

Query: 145 ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDT 204
           ++E+V++A   A +AH  QKR SGEP+IIHP+ VA IL EL +D  +I AGLLHD +EDT
Sbjct: 17  DVEMVKKAYDFAEKAHKDQKRESGEPYIIHPIAVAEILAELGMDTNTIVAGLLHDVIEDT 76

Query: 205 NVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEV 264
              +++     F A +  +VEG TK++KLG+++ K +    ++ +AD++R+M LAM +++
Sbjct: 77  EF-SYDETVSLFNAEIANLVEGVTKLTKLGEMEYKTK----EEQQADNVRKMLLAMAKDI 131

Query: 265 RVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYT 324
           RVII+KLADRLHNMRTL  MP  KQ + A ETL ++APLA  LGM +IK ELE+L F Y 
Sbjct: 132 RVIIIKLADRLHNMRTLKFMPAKKQKNKAKETLDIYAPLAHRLGMSKIKWELEDLCFRYL 191

Query: 325 NAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIY 384
           + ++Y ++   +A+   E E  + +    L +K+ +        ++++I    K  YSIY
Sbjct: 192 HEKEYYELVDSIAEKRVERETYINDIVNDLKQKLGNS------GIESDIDGRPKHFYSIY 245

Query: 385 KAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMK 444
           K ++    SI ++  +  +R+            L    + CY VLG+VH I+ PIP   K
Sbjct: 246 KKMVSKNKSIEQIFDLTAIRV------------LVHSVKDCYGVLGIVHTIYRPIPGRFK 293

Query: 445 DYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLV 504
           DYIA PKPN YQSLHTT+I    ++    E+QIRT EM   AE GIAAH+  +       
Sbjct: 294 DYIAMPKPNMYQSLHTTVIGPQGKT---FEIQIRTFEMHKTAEYGIAAHWKYK------- 343

Query: 505 GHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSR 564
                 G + +G+       +   ++ WL  + EWQ+E      + EF++    DL    
Sbjct: 344 -----EGDNAKGEQD--KQKDFEKKLVWLRDMLEWQKE---TSDAEEFIEGFKIDLFSDE 393

Query: 565 VFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
           VFVFTP+G + NL   AT +D+AY IHT++GNK V AKVNG +V   + L   E+VEI+T
Sbjct: 394 VFVFTPKGVVINLCSNATPIDFAYRIHTDVGNKCVGAKVNGKIVPLDYTLKTGEIVEILT 453


>gi|336063522|ref|YP_004558381.1| GTP pyrophosphokinase [Streptococcus pasteurianus ATCC 43144]
 gi|334281722|dbj|BAK29295.1| GTP pyrophosphokinase [Streptococcus pasteurianus ATCC 43144]
          Length = 739

 Score =  341 bits (875), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 192/494 (38%), Positives = 300/494 (60%), Gaps = 49/494 (9%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  Y+S +++ +V++AL  A +AH  Q R+SGEP+IIHP++VA IL +L LD  ++A G 
Sbjct: 16  TAQYMSESDVAIVQKALDYATKAHISQVRQSGEPYIIHPIQVAGILADLHLDVVTVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT V T + IE EFG  VR IV+G   V+KLGK++ K+    +    A++ R+M
Sbjct: 76  LHDVVEDTEV-TLDDIEAEFGKDVRDIVDG---VTKLGKVEYKSHEEQL----AENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM++++RVI+VKLADRLHNMRTL H+   KQ  I+ ET++++APLA  LG+ +IK EL
Sbjct: 128 LMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y +  ++ K+   + +  +E E  ++E    ++KKI+D  +     +  E+   
Sbjct: 188 EDLSFRYLDEIEFYKISHMMKEKRREREALVDE----IVKKIKD--YTQEQGLYGEVYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSIY+ +   +   +++  +  +R I++           +P  + Y ++G +H +W
Sbjct: 242 PKHIYSIYRKMRDKKKRFDQIYDLIAIRCIME-----------TPSDV-YAMVGYIHELW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA PK NGYQS+HTT    +Y     +E+QIRT+EM  +AE G+AAH++ 
Sbjct: 290 RPMPGRFKDYIAAPKANGYQSIHTT----VYGPKGPIEIQIRTKEMHQVAEYGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  + G V                 +N   A+ ++W+  + E Q+    N  + +FVD++
Sbjct: 346 KQGIKGKV-----------------DNQEQAVGMNWIKELVELQD--ASNGDAVDFVDSV 386

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
            +D+   R++VFTP G ++ LPK +  +D+AY IHT++G K V AKVNG +V  T  L  
Sbjct: 387 KQDIFSERIYVFTPTGAVQELPKDSGPIDFAYAIHTQVGEKAVGAKVNGRMVPLTAKLKT 446

Query: 617 AEVVEIITYNVSFS 630
            +VVEI+T   SF 
Sbjct: 447 GDVVEIVTNPNSFG 460


>gi|217964330|ref|YP_002350008.1| GTP pyrophosphokinase [Listeria monocytogenes HCC23]
 gi|290893882|ref|ZP_06556860.1| GTP pyrophosphokinase [Listeria monocytogenes FSL J2-071]
 gi|386008294|ref|YP_005926572.1| GTP pyrophosphokinase [Listeria monocytogenes L99]
 gi|386026896|ref|YP_005947672.1| putative (p)ppGpp synthetase [Listeria monocytogenes M7]
 gi|404407961|ref|YP_006690676.1| GTP pyrophosphokinase [Listeria monocytogenes SLCC2376]
 gi|217333600|gb|ACK39394.1| GTP pyrophosphokinase (ATP:GTP 3-pyrophosphotransferase)(ppGpp
           synthetase I) ((P)ppGpp synthetase) [Listeria
           monocytogenes HCC23]
 gi|290556599|gb|EFD90135.1| GTP pyrophosphokinase [Listeria monocytogenes FSL J2-071]
 gi|307571104|emb|CAR84283.1| GTP pyrophosphokinase [Listeria monocytogenes L99]
 gi|336023477|gb|AEH92614.1| putative (p)ppGpp synthetase [Listeria monocytogenes M7]
 gi|404242110|emb|CBY63510.1| GTP pyrophosphokinase [Listeria monocytogenes SLCC2376]
          Length = 738

 Score =  341 bits (875), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 194/490 (39%), Positives = 293/490 (59%), Gaps = 50/490 (10%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++   L LV++A   A ++H  Q R+SGEP+IIHP++VA IL EL++D  ++A+G LHD
Sbjct: 19  YMNQEHLALVKKAYEFARDSHKEQFRKSGEPYIIHPIQVAGILVELKMDPSTVASGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            VEDT  VT   +EE FG+ V  +V+G   V+KLGK+K K    S ++ +A++ R+MF+A
Sbjct: 79  VVEDT-PVTLADLEEVFGSEVAMLVDG---VTKLGKIKYK----SHEEQQAENHRKMFIA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M +++RVI++KLADRLHNMRTL H+P  KQ  IA ETL++FAPLA  LG+ ++K ELE+ 
Sbjct: 131 MAQDIRVILIKLADRLHNMRTLKHLPVEKQRRIANETLEIFAPLAHRLGISRVKWELEDT 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           +  Y N + Y     R+  L K+     E     ++  + ++  LD + ++ +I    K 
Sbjct: 191 ALRYLNPQQYY----RIVHLMKQKRDARERYLHDVIDGVNEN--LDELNIQADISGRPKH 244

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIY+ + +     NE+  +  +RI++            S  + CY VLG++H  W P+
Sbjct: 245 IYSIYRKMSEQNKQFNEIYDLLAVRIVV------------SSIKDCYAVLGIIHTRWKPM 292

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK N YQS+HTT+I    E    LEVQIRT EM  IAE G+AAH+     
Sbjct: 293 PGRFKDYIAMPKSNMYQSIHTTVIGPQGEP---LEVQIRTHEMHQIAEYGVAAHW----- 344

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
                  A   G+    KT   N      +++W   I E+Q E   +  + EF++++  D
Sbjct: 345 -------AYKEGKVVNSKTSFDN------KLTWFREILEYQNE---SDNAEEFMESLKLD 388

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           L    V+VFTP+G++  LP G+  +D+AY +HTEIGNK + AK+NG +V+  + L   ++
Sbjct: 389 LFSDVVYVFTPKGDVYELPNGSVPLDFAYRVHTEIGNKTIGAKINGKIVTLDYKLKTGDI 448

Query: 620 VEIITYNVSF 629
           ++I+T   S+
Sbjct: 449 IDILTSKHSY 458


>gi|317153777|ref|YP_004121825.1| RelA/SpoT family protein [Desulfovibrio aespoeensis Aspo-2]
 gi|316944028|gb|ADU63079.1| RelA/SpoT family protein [Desulfovibrio aespoeensis Aspo-2]
          Length = 726

 Score =  341 bits (875), Expect = 7e-91,   Method: Compositional matrix adjust.
 Identities = 201/486 (41%), Positives = 291/486 (59%), Gaps = 45/486 (9%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           SY+   +L+L++RA + + +AHDG  RRSGEP+I HP+ VA +L E++LD  ++AAGLLH
Sbjct: 13  SYIDNPDLDLIQRAYVFSAQAHDGVVRRSGEPYISHPMNVAYLLAEMQLDEATVAAGLLH 72

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           DTVEDT   + + IEE FG+ V  IV+G TK+S++       E+ +VQ  +A+++R++ L
Sbjct: 73  DTVEDTQA-SVDEIEEFFGSDVADIVDGVTKISQM-----DFESKAVQ--QAENIRKLIL 124

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM E++RV++VKLADRLHNMRTL  M P KQ  IA ET  ++APLA  LG++++K+ELE+
Sbjct: 125 AMAEDIRVLMVKLADRLHNMRTLEFMKPVKQRLIAQETQDIYAPLANRLGLHRVKTELED 184

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
           L   Y   + + ++ + V+    EH    E     ++  I D   L    +K  +    K
Sbjct: 185 LCLRYLKPDVFDQLSQAVS----EHRASGEPYIDKVIDLIND--MLKKNKIKGRVYGRTK 238

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             +SI+  + +   + +E+  +   RII++              + CY VLGL+H IW P
Sbjct: 239 HLHSIHVKMEQQGLTFDEIYDLIAFRIILE------------SVKDCYAVLGLIHSIWRP 286

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYI+ PK N YQSLH+T+I    E   R+EVQIRTEEM+ IAE G+AAH+  + 
Sbjct: 287 VPGRFKDYISIPKANMYQSLHSTVIGPDGE---RIEVQIRTEEMNRIAEYGVAAHWQYKE 343

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                VG      RS         +   A R +WL  I +WQ E       REF+ ++  
Sbjct: 344 -----VGKGSKRARSA--------DTRDAERYTWLRQIMDWQREL---SDPREFMASLRL 387

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           ++    V+VFTP G+IK LP+GAT VD+AY IH+E+G+K   AKVNG +V     L N +
Sbjct: 388 EMFQEEVYVFTPSGDIKELPEGATPVDFAYAIHSEVGDKCAGAKVNGRIVPLHSPLKNGD 447

Query: 619 VVEIIT 624
            VEIIT
Sbjct: 448 SVEIIT 453


>gi|320547771|ref|ZP_08042055.1| GTP diphosphokinase [Streptococcus equinus ATCC 9812]
 gi|320447531|gb|EFW88290.1| GTP diphosphokinase [Streptococcus equinus ATCC 9812]
          Length = 740

 Score =  341 bits (875), Expect = 7e-91,   Method: Compositional matrix adjust.
 Identities = 191/494 (38%), Positives = 302/494 (61%), Gaps = 49/494 (9%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  Y+S +++ +V++AL  A +AH  Q R+SGEP+IIHP++VA IL +L LD  ++A G 
Sbjct: 16  TAQYMSESDVAIVQKALDYATKAHISQVRQSGEPYIIHPIQVAGILADLHLDVVTVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT++ T + IE EFG  VR IV+G   V+KLGK++ K+    +    A++ R+M
Sbjct: 76  LHDVVEDTDI-TLDEIEAEFGKDVRIIVDG---VTKLGKVEYKSHEEQL----AENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM++++RVI+VKLADRLHNMRTL H+   KQ  I+ ET++++APLA  LG+ +IK EL
Sbjct: 128 LMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y N  ++ K+   + +  +E E  ++E    ++KKI+D  + +   +  ++   
Sbjct: 188 EDLSFRYLNEIEFYKISHMMNEKRREREALVDE----IVKKIKD--YTEEQGLYGDVYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSIY+ +   +   +++  +  +R I++           +P  + Y ++G +H +W
Sbjct: 242 PKHLYSIYRKMRDKKKRFDQIYDLIAIRCIME-----------TPSDV-YAMVGYIHELW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA PK NGYQS+HTT    +Y     +E+QIRT+EM  +AE G+AAH++ 
Sbjct: 290 RPMPGRFKDYIAAPKANGYQSIHTT----VYGPKGPIEIQIRTKEMHQVAEYGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  + G V                 ++   A+ +SW+  + E Q+    N  + +FVD++
Sbjct: 346 KKGIKGKV-----------------DDQEQAVGMSWIKELVELQD--ASNGDAVDFVDSV 386

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
            +D+   R++VFTP G ++ LPK +  +D+AY IHT++G K V AKVNG +V  T  L  
Sbjct: 387 KQDIFSERIYVFTPTGAVQELPKDSGPIDFAYAIHTQVGEKAVGAKVNGRMVPLTAKLKT 446

Query: 617 AEVVEIITYNVSFS 630
            +VVEI+T   SF 
Sbjct: 447 GDVVEIVTNPNSFG 460


>gi|170758445|ref|YP_001788379.1| GTP pyrophosphokinase [Clostridium botulinum A3 str. Loch Maree]
 gi|169405434|gb|ACA53845.1| putative GTP diphosphokinase/guanosine-3',5'-bis(diphosphate)
           3'-pyrophosphohydrolase [Clostridium botulinum A3 str.
           Loch Maree]
          Length = 723

 Score =  341 bits (875), Expect = 7e-91,   Method: Compositional matrix adjust.
 Identities = 201/501 (40%), Positives = 289/501 (57%), Gaps = 63/501 (12%)

Query: 130 LWEDLRPTISY-LSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
           + EDL   I Y  +  E+E +++A   A  AH  QKR SGEP+I HP EVA IL E+ +D
Sbjct: 1   MLEDLMIKIKYSFTEKEIEFIKKAYNFACNAHKEQKRISGEPYITHPEEVAIILFEMGMD 60

Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
             ++ AGL+HD VEDT   T+E + +EFG  V  +V G   V+KLGK++ K +    ++ 
Sbjct: 61  VNTMIAGLMHDVVEDTQY-TYEDVAKEFGNEVADLVNG---VTKLGKIEYKTK----EEQ 112

Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
           +AD++R+M LAMT+++RVI++KLADRLHNMRTL  MP  KQ   A ETL ++APLA  LG
Sbjct: 113 QADNVRKMLLAMTKDIRVILIKLADRLHNMRTLRFMPVEKQKEKAQETLDIYAPLAHRLG 172

Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
           + +IK ELE+LSF Y N  +Y  + R++A+   E E+ ++E    L       Q L    
Sbjct: 173 ISKIKWELEDLSFRYINPNEYYFLVRKIAEKRAEREEHIKEIISNLQ------QNLKRAG 226

Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
           +++EI    K  YSIYK +     +++++  +  +RI            L    + CY  
Sbjct: 227 IESEIDGRPKHFYSIYKKMHNKNKNLDQIFDLTAVRI------------LVDTVKDCYAA 274

Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMD 483
           LG+ H ++ PIP   KDYIA PKPN YQSLH+T++     PF        E+QIRT EM 
Sbjct: 275 LGIAHTVYKPIPGRFKDYIAMPKPNMYQSLHSTVMGVGGRPF--------EIQIRTYEMH 326

Query: 484 LIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEF 543
             AE GIAAH+                    + K    N+ NI L+++WL  + +WQ+E 
Sbjct: 327 KTAEYGIAAHW--------------------KYKEGVENSNNIDLKLTWLREMLDWQKE- 365

Query: 544 VGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKV 603
                  EF+     DL    VFVFTP+G++ +LP  AT VD+AY IHT+IG++ + AKV
Sbjct: 366 --TTDPEEFMQGFKIDLFSDEVFVFTPKGKVISLPNKATPVDFAYKIHTDIGHRCIGAKV 423

Query: 604 NGNLVSPTHVLANAEVVEIIT 624
           NG +V   + L   E++E++T
Sbjct: 424 NGKMVPLDYELKTGEIIEVLT 444


>gi|242280235|ref|YP_002992364.1| (p)ppGpp synthetase I SpoT/RelA [Desulfovibrio salexigens DSM 2638]
 gi|242123129|gb|ACS80825.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfovibrio salexigens DSM
           2638]
          Length = 723

 Score =  341 bits (875), Expect = 7e-91,   Method: Compositional matrix adjust.
 Identities = 199/491 (40%), Positives = 282/491 (57%), Gaps = 59/491 (12%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           SY+   +L+L++RA + +  AH+GQ R SGEP++ HP+ VA++L ++ LD  ++AAGLLH
Sbjct: 13  SYIDDPDLDLIQRAYVFSARAHEGQVRLSGEPYLAHPLHVAKLLADMRLDEPTVAAGLLH 72

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           DTVEDT+  T + I + FG  V  IV+G TK+S +       +  S    KA+++R+M L
Sbjct: 73  DTVEDTDT-TIDEIADLFGEEVADIVDGVTKISMM-------DFESKAIAKAENIRKMIL 124

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM E++RV++VKLADRLHNMRTL     +KQ  IA ET+ +++PLA  LG+Y +K +LE+
Sbjct: 125 AMAEDIRVLMVKLADRLHNMRTLDFQKSYKQLLIAQETMDIYSPLANRLGLYMVKRDLED 184

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIED-----DQFLDLMTVKTEI 373
           L   Y              D+Y++    LE  + I  + +++     +  LD   +K  I
Sbjct: 185 LCLYYLK-----------PDVYQDITDGLERQHTIGKEYVDNVIGLLNGILDNNEIKGTI 233

Query: 374 RSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVH 433
               K  YSI+K + +   S+++V  I   R+I++              + CY VLGLVH
Sbjct: 234 YGRTKHIYSIHKKMQRQNLSLDQVYDIIAFRVIVE------------SVKDCYSVLGLVH 281

Query: 434 GIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAH 493
            +W PI    KDYI+ PK N YQSLHTT+I    E   R+E+QIRTEEM  +AE G+AAH
Sbjct: 282 SMWKPISGKFKDYISIPKANMYQSLHTTVIGPEGE---RIEIQIRTEEMQQVAEYGVAAH 338

Query: 494 YSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFV 553
           +             + +GRS   +         A R SWL  I +WQ E       REF+
Sbjct: 339 W-----------QYKESGRSDSKQN------RDAERFSWLRQIMDWQREL---EDPREFM 378

Query: 554 DTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHV 613
            ++  DL    V+VFTP GEIK LP GAT VD+AY IHTE+GN    AKVNG +V    V
Sbjct: 379 ASLRFDLFNDEVYVFTPTGEIKELPDGATPVDFAYSIHTEVGNHCTGAKVNGRMVPLNSV 438

Query: 614 LANAEVVEIIT 624
           L N + +E+ T
Sbjct: 439 LKNGDTIEVFT 449


>gi|292670701|ref|ZP_06604127.1| GTP diphosphokinase [Selenomonas noxia ATCC 43541]
 gi|292647647|gb|EFF65619.1| GTP diphosphokinase [Selenomonas noxia ATCC 43541]
          Length = 746

 Score =  341 bits (874), Expect = 7e-91,   Method: Compositional matrix adjust.
 Identities = 196/490 (40%), Positives = 291/490 (59%), Gaps = 50/490 (10%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           SY +  +LE +++A   A +AH GQ R SG+ +I+HP+ VA IL  L LD E++ A LLH
Sbjct: 23  SYQADADLEKIKKAYSFAEQAHRGQVRISGDAYIMHPLNVAYILTGLHLDDETVCAALLH 82

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT+  T E +E EFG  +  +++G   V+KLG++    E  S +DVK ++ R+MFL
Sbjct: 83  DVVEDTHA-TLEEMEAEFGRNIMALIDG---VTKLGRI----EYMSKEDVKLENYRKMFL 134

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM +++RVI++KLADRLHNMRTL +M   K+  IA ET++V+APLA  LG+  IK ELE+
Sbjct: 135 AMAKDIRVIMIKLADRLHNMRTLKYMREDKRRRIAKETIEVYAPLANRLGISSIKVELED 194

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
           L   Y   E Y  +   V    +E ++ + ++ + + +K+E         +K EI+   K
Sbjct: 195 LCLRYLEPEAYYALVEEVKHKRQERQEFILDSIQKIHEKLE------AADIKAEIKGRAK 248

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIY+ + +   S+NE+  ++ +RI            L S  + CY VLG++H +W P
Sbjct: 249 HFYSIYRKMKRDNKSVNEIYDLSAVRI------------LVSSVKDCYGVLGVIHAMWKP 296

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           IP   KDYIA PK NGYQSLHTT++   Y     LE+QIRTE M  I+E G+AAH+  + 
Sbjct: 297 IPGRFKDYIAMPKSNGYQSLHTTVMTRGYP----LEIQIRTEAMHRISEFGVAAHWKYK- 351

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                            G+++ + + N   ++SWL  +   Q+E+      +EF + +  
Sbjct: 352 ---------------EAGRSIGVTDEN-DQKMSWLRQMVSLQKEY---DDPKEFFEALKL 392

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           D+    VFVFTPRG++ +LPKG+  +D+AY IHTEIG+  V AKVNG +V   + L N +
Sbjct: 393 DVFSDEVFVFTPRGDVIDLPKGSNPIDFAYHIHTEIGHHCVGAKVNGKIVPLEYKLKNGD 452

Query: 619 VVEIITYNVS 628
           +V I+T   S
Sbjct: 453 IVSIVTNKAS 462


>gi|339441909|ref|YP_004707914.1| guanosine polyphosphate pyrophosphohydrolase/synthetases
           [Clostridium sp. SY8519]
 gi|338901310|dbj|BAK46812.1| guanosine polyphosphate pyrophosphohydrolase/synthetases
           [Clostridium sp. SY8519]
          Length = 779

 Score =  341 bits (874), Expect = 7e-91,   Method: Compositional matrix adjust.
 Identities = 208/525 (39%), Positives = 302/525 (57%), Gaps = 71/525 (13%)

Query: 117 VSSDAFKED---------SPERLWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRR 166
           VS+D  + D         SPE L E+L  +I    P+ ++ LV +A  +A  AH GQ R+
Sbjct: 13  VSADTLESDKIRSTKDFVSPEELHEELIRSIRRYHPSTDISLVEKAYHIAANAHKGQVRK 72

Query: 167 SGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEG 226
           SGE +IIHP+ VA IL +LE+D E+I AGLLHD  EDT + T E + E+F   V  +V+G
Sbjct: 73  SGEEYIIHPLCVAIILADLEMDKETIVAGLLHDVAEDTGM-TLEELAEDFNDEVALLVDG 131

Query: 227 ETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPP 286
            TK+++L     K E      V+A++LR+MFLAM +++RVII+KLADRLHNMRTL  M P
Sbjct: 132 VTKLNQLSYDADKIE------VQAENLRKMFLAMAKDIRVIIIKLADRLHNMRTLQFMKP 185

Query: 287 HKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKE 346
            KQ   A ET++++AP+A+ LG+  IK ELE+LS  Y   E Y  +  ++A   KE +  
Sbjct: 186 EKQKEKARETMEIYAPIAQRLGISSIKVELEDLSLKYLEPEAYYDLVEKIALRKKERDAY 245

Query: 347 LEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRII 406
           ++     L+K+++    +    ++  +    K  +SIYK ++    +++++  +  +RII
Sbjct: 246 VD----ALVKQVK--STIAAADIEATVYGRAKHFFSIYKKMVNQDKTLDQIYDLFAIRII 299

Query: 407 IKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI--- 463
           +K              + CY  LG++H  +TP+P   KDYIA PKPN YQSLHTTL+   
Sbjct: 300 VK------------DVKDCYAALGVIHEHYTPVPGRFKDYIAMPKPNMYQSLHTTLMGPN 347

Query: 464 --PFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCL 521
             PF        E+QIRTEEM    E GIAAH+  +            NG    G+    
Sbjct: 348 GQPF--------EIQIRTEEMHRTCEYGIAAHWKYK---------EANNGGGISGEEE-- 388

Query: 522 NNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPK 579
                  ++SWL  I EWQ++   N    EF+  +    DL    VF FTP G++K+LPK
Sbjct: 389 -------KLSWLRQILEWQQDMSDN---HEFMSLLKSDLDLFSDSVFCFTPNGDVKSLPK 438

Query: 580 GATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
           G+T +D+AY IHT +GNKM+ AKVNG LV+  + + N + +EI+T
Sbjct: 439 GSTPIDFAYSIHTAVGNKMIGAKVNGKLVTIDYEIRNGDRIEILT 483


>gi|373454718|ref|ZP_09546582.1| RelA/SpoT family protein [Dialister succinatiphilus YIT 11850]
 gi|371935581|gb|EHO63326.1| RelA/SpoT family protein [Dialister succinatiphilus YIT 11850]
          Length = 800

 Score =  341 bits (874), Expect = 7e-91,   Method: Compositional matrix adjust.
 Identities = 199/502 (39%), Positives = 287/502 (57%), Gaps = 54/502 (10%)

Query: 123 KEDSPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARIL 182
           KE+  +RL + ++  I    P  LE +  A  LA +AH  Q R +GEP+IIHP+ VA IL
Sbjct: 72  KEEEYKRLMDKVKTYIK--DPKSLEAIEEAYELASKAHAAQVRATGEPYIIHPLAVAYIL 129

Query: 183 GELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNEN 242
            ELE+D + I A LLHD VEDT   T E I+  FG  V  +V+G   V+KL +   K++ 
Sbjct: 130 AELEMDPQGIMAALLHDVVEDTEY-TLEDIKMMFGEEVAFLVDG---VTKLSQFHYKDK- 184

Query: 243 HSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAP 302
              +D + ++ R+MFLAM +++RV+++KLADRLHNMRTL      KQ  IA ET++++AP
Sbjct: 185 ---EDQQLENFRKMFLAMAKDIRVVVIKLADRLHNMRTLGVFRREKQQRIAKETIEIYAP 241

Query: 303 LAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQ 362
           LA  LG+Y IK ELE+L F Y + E+Y  + R++    K  E+ + +  ++L   IE+  
Sbjct: 242 LAHRLGIYNIKWELEDLCFHYLHPEEYYDLVRQMKQKRKAREEIVNDTMRVLHDHIEE-- 299

Query: 363 FLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQ 422
                 +K  I    K  YSIYK + +    ++++  +  +R+I+   P           
Sbjct: 300 ----AGIKATITGRPKHFYSIYKKMKRDNKDLSQIYDLYAVRVIVDTIPQ---------- 345

Query: 423 QICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEM 482
             CY VLG+ H +W P+P   KDYIA PKPN YQSLHTT+I    +    +E+QIRT EM
Sbjct: 346 --CYAVLGIAHSLWKPLPNRFKDYIAVPKPNMYQSLHTTVIGTRGQP---VEIQIRTWEM 400

Query: 483 DLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEE 542
             I+E G+AAH+                 R   GK     + +   +ISWL  I EWQ+ 
Sbjct: 401 HHISEYGVAAHW-----------------RYKEGKQA--GSKDFDAKISWLRRILEWQD- 440

Query: 543 FVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAK 602
                  +EF++ +  D+    VFVFTP+G++ NLPKG+  +D+AY IHTE+GN+ V AK
Sbjct: 441 ---TSNPKEFMNALKLDVFSDEVFVFTPKGDVINLPKGSIPIDFAYRIHTEVGNRCVGAK 497

Query: 603 VNGNLVSPTHVLANAEVVEIIT 624
           VN  +V     L N ++V IIT
Sbjct: 498 VNNKIVPLDTKLKNGDIVSIIT 519


>gi|422809604|ref|ZP_16858015.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Listeria
           monocytogenes FSL J1-208]
 gi|378753218|gb|EHY63803.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Listeria
           monocytogenes FSL J1-208]
          Length = 738

 Score =  341 bits (874), Expect = 8e-91,   Method: Compositional matrix adjust.
 Identities = 194/490 (39%), Positives = 293/490 (59%), Gaps = 50/490 (10%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++   L LV++A   A ++H  Q R+SGEP+IIHP++VA IL EL++D  ++A+G LHD
Sbjct: 19  YMNQEHLALVKKAYEFARDSHKEQFRKSGEPYIIHPIQVAGILVELKMDPSTVASGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            VEDT  VT   +EE FG+ V  +V+G   V+KLGK+K K    S ++ +A++ R+MF+A
Sbjct: 79  VVEDT-PVTLADLEEVFGSEVAMLVDG---VTKLGKIKYK----SHEEQQAENHRKMFIA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M +++RVI++KLADRLHNMRTL H+P  KQ  IA ETL++FAPLA  LG+ ++K ELE+ 
Sbjct: 131 MAQDIRVILIKLADRLHNMRTLKHLPVEKQRRIANETLEIFAPLAHRLGISRVKWELEDT 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           +  Y N + Y     R+  L K+     E     ++  + ++  LD + ++ +I    K 
Sbjct: 191 ALRYLNPQQYY----RIVHLMKQKRDARERYLHDVIDGVNEN--LDELNIQADISGRPKH 244

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIY+ + +     NE+  +  +RI++            S  + CY VLG++H  W P+
Sbjct: 245 IYSIYRKMSEQNKQFNEIYDLLAVRIVV------------SSIKDCYAVLGIIHTRWKPM 292

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK N YQS+HTT+I    E    LEVQIRT EM  IAE G+AAH+     
Sbjct: 293 PGRFKDYIAMPKSNMYQSIHTTVIGPQGEP---LEVQIRTHEMHQIAEYGVAAHW----- 344

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
                  A   G+    KT   N      +++W   I E+Q E   +  + EF++++  D
Sbjct: 345 -------AYKEGKVVNSKTSFDN------KLTWFREILEYQNE---SDNAEEFMESLKLD 388

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           L    V+VFTP+G++  LP G+  +D+AY +HTEIGNK + AK+NG +V+  + L   ++
Sbjct: 389 LFSDVVYVFTPKGDVYELPNGSVPLDFAYRVHTEIGNKTIGAKINGKIVTLDYKLKTGDI 448

Query: 620 VEIITYNVSF 629
           ++I+T   S+
Sbjct: 449 IDILTSKHSY 458


>gi|254994034|ref|ZP_05276224.1| (p)ppGpp synthetase [Listeria monocytogenes FSL J2-064]
          Length = 711

 Score =  341 bits (874), Expect = 8e-91,   Method: Compositional matrix adjust.
 Identities = 194/490 (39%), Positives = 293/490 (59%), Gaps = 50/490 (10%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++   L LV++A   A ++H  Q R+SGEP+IIHP++VA IL EL++D  ++A+G LHD
Sbjct: 19  YMNQEHLALVKKAYEFARDSHKEQFRKSGEPYIIHPIQVAGILVELKMDPSTVASGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            VEDT  VT   +EE FG+ V  +V+G   V+KLGK+K K    S ++ +A++ R+MF+A
Sbjct: 79  VVEDT-PVTLADLEEVFGSEVAMLVDG---VTKLGKIKYK----SHEEQQAENHRKMFIA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M +++RVI++KLADRLHNMRTL H+P  KQ  IA ETL++FAPLA  LG+ ++K ELE+ 
Sbjct: 131 MAQDIRVILIKLADRLHNMRTLKHLPVEKQRRIANETLEIFAPLAHRLGISRVKWELEDT 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           +  Y N + Y     R+  L K+     E     ++  + ++  LD + ++ +I    K 
Sbjct: 191 ALRYLNPQQYY----RIVHLMKQKRDARERYLHDVIDGVNEN--LDELNIQADISGRPKH 244

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIY+ + +     NE+  +  +RI++            S  + CY VLG++H  W P+
Sbjct: 245 IYSIYRKMSEQNKQFNEIYDLLAVRIVV------------SSIKDCYAVLGIIHTRWKPM 292

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK N YQS+HTT+I    E    LEVQIRT EM  IAE G+AAH+     
Sbjct: 293 PGRFKDYIAMPKSNMYQSIHTTVIGPQGEP---LEVQIRTHEMHQIAEYGVAAHW----- 344

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
                  A   G+    KT   N      +++W   I E+Q E   +  + EF++++  D
Sbjct: 345 -------AYKEGKVVNSKTSFDN------KLTWFREILEYQNE---SDNAEEFMESLKLD 388

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           L    V+VFTP+G++  LP G+  +D+AY +HTEIGNK + AK+NG +V+  + L   ++
Sbjct: 389 LFSDVVYVFTPKGDVYELPNGSVPLDFAYRVHTEIGNKTIGAKINGKIVTLDYKLKTGDI 448

Query: 620 VEIITYNVSF 629
           ++I+T   S+
Sbjct: 449 IDILTSKHSY 458


>gi|16803563|ref|NP_465048.1| hypothetical protein lmo1523 [Listeria monocytogenes EGD-e]
 gi|47097020|ref|ZP_00234593.1| GTP pyrophosphokinase [Listeria monocytogenes str. 1/2a F6854]
 gi|254828243|ref|ZP_05232930.1| relA [Listeria monocytogenes FSL N3-165]
 gi|254912197|ref|ZP_05262209.1| GTP pyrophosphokinase [Listeria monocytogenes J2818]
 gi|254936525|ref|ZP_05268222.1| relA [Listeria monocytogenes F6900]
 gi|284801913|ref|YP_003413778.1| hypothetical protein LM5578_1668 [Listeria monocytogenes 08-5578]
 gi|284995055|ref|YP_003416823.1| hypothetical protein LM5923_1620 [Listeria monocytogenes 08-5923]
 gi|386043834|ref|YP_005962639.1| GTP pyrophosphokinase [Listeria monocytogenes 10403S]
 gi|386047175|ref|YP_005965507.1| relA [Listeria monocytogenes J0161]
 gi|386050499|ref|YP_005968490.1| GTP pyrophosphokinase [Listeria monocytogenes FSL R2-561]
 gi|386053776|ref|YP_005971334.1| GTP pyrophosphokinase [Listeria monocytogenes Finland 1998]
 gi|404284015|ref|YP_006684912.1| GTP pyrophosphokinase [Listeria monocytogenes SLCC2372]
 gi|404410825|ref|YP_006696413.1| GTP pyrophosphokinase [Listeria monocytogenes SLCC5850]
 gi|405758571|ref|YP_006687847.1| GTP pyrophosphokinase [Listeria monocytogenes SLCC2479]
 gi|16410952|emb|CAC99601.1| relA [Listeria monocytogenes EGD-e]
 gi|47014602|gb|EAL05562.1| GTP pyrophosphokinase [Listeria monocytogenes str. 1/2a F6854]
 gi|258600631|gb|EEW13956.1| relA [Listeria monocytogenes FSL N3-165]
 gi|258609119|gb|EEW21727.1| relA [Listeria monocytogenes F6900]
 gi|284057475|gb|ADB68416.1| hypothetical protein LM5578_1668 [Listeria monocytogenes 08-5578]
 gi|284060522|gb|ADB71461.1| hypothetical protein LM5923_1620 [Listeria monocytogenes 08-5923]
 gi|293590170|gb|EFF98504.1| GTP pyrophosphokinase [Listeria monocytogenes J2818]
 gi|345534166|gb|AEO03607.1| relA [Listeria monocytogenes J0161]
 gi|345537068|gb|AEO06508.1| GTP pyrophosphokinase [Listeria monocytogenes 10403S]
 gi|346424345|gb|AEO25870.1| GTP pyrophosphokinase [Listeria monocytogenes FSL R2-561]
 gi|346646427|gb|AEO39052.1| GTP pyrophosphokinase [Listeria monocytogenes Finland 1998]
 gi|404230651|emb|CBY52055.1| GTP pyrophosphokinase [Listeria monocytogenes SLCC5850]
 gi|404233517|emb|CBY54920.1| GTP pyrophosphokinase [Listeria monocytogenes SLCC2372]
 gi|404236453|emb|CBY57855.1| GTP pyrophosphokinase [Listeria monocytogenes SLCC2479]
 gi|441471216|emb|CCQ20971.1| GTP pyrophosphokinase [Listeria monocytogenes]
 gi|441474345|emb|CCQ24099.1| GTP pyrophosphokinase [Listeria monocytogenes N53-1]
          Length = 738

 Score =  341 bits (874), Expect = 8e-91,   Method: Compositional matrix adjust.
 Identities = 194/490 (39%), Positives = 293/490 (59%), Gaps = 50/490 (10%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++   L LV++A   A ++H  Q R+SGEP+IIHP++VA IL EL++D  ++A+G LHD
Sbjct: 19  YMNQEHLALVKKAYEFARDSHKEQFRKSGEPYIIHPIQVAGILVELKMDPSTVASGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            VEDT  VT   +EE FG+ V  +V+G   V+KLGK+K K    S ++ +A++ R+MF+A
Sbjct: 79  VVEDT-PVTLADLEEVFGSEVAMLVDG---VTKLGKIKYK----SHEEQQAENHRKMFIA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M +++RVI++KLADRLHNMRTL H+P  KQ  IA ETL++FAPLA  LG+ ++K ELE+ 
Sbjct: 131 MAQDIRVILIKLADRLHNMRTLKHLPVEKQRRIANETLEIFAPLAHRLGISRVKWELEDT 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           +  Y N + Y     R+  L K+     E     ++  + ++  LD + ++ +I    K 
Sbjct: 191 ALRYLNPQQYY----RIVHLMKQKRDARERYLHDVIDGVNEN--LDELNIQADISGRPKH 244

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIY+ + +     NE+  +  +RI++            S  + CY VLG++H  W P+
Sbjct: 245 IYSIYRKMSEQNKQFNEIYDLLAVRIVV------------SSIKDCYAVLGIIHTRWKPM 292

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK N YQS+HTT+I    E    LEVQIRT EM  IAE G+AAH+     
Sbjct: 293 PGRFKDYIAMPKSNMYQSIHTTVIGPQGEP---LEVQIRTHEMHQIAEYGVAAHW----- 344

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
                  A   G+    KT   N      +++W   I E+Q E   +  + EF++++  D
Sbjct: 345 -------AYKEGKVVNSKTSFDN------KLTWFREILEYQNE---SDNAEEFMESLKLD 388

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           L    V+VFTP+G++  LP G+  +D+AY +HTEIGNK + AK+NG +V+  + L   ++
Sbjct: 389 LFSDVVYVFTPKGDVYELPNGSVPLDFAYRVHTEIGNKTIGAKINGKIVTLDYKLKTGDI 448

Query: 620 VEIITYNVSF 629
           ++I+T   S+
Sbjct: 449 IDILTSKHSY 458


>gi|315282436|ref|ZP_07870851.1| GTP diphosphokinase [Listeria marthii FSL S4-120]
 gi|313613919|gb|EFR87648.1| GTP diphosphokinase [Listeria marthii FSL S4-120]
          Length = 738

 Score =  341 bits (874), Expect = 8e-91,   Method: Compositional matrix adjust.
 Identities = 194/490 (39%), Positives = 293/490 (59%), Gaps = 50/490 (10%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++   L LV++A   A ++H  Q R+SGEP+IIHP++VA IL EL++D  ++A+G LHD
Sbjct: 19  YMNQEHLALVKKAYEFARDSHKEQFRKSGEPYIIHPIQVAGILVELKMDPSTVASGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            VEDT  VT   +EE FG+ V  +V+G   V+KLGK+K K    S ++ +A++ R+MF+A
Sbjct: 79  VVEDT-PVTLADLEEVFGSEVAMLVDG---VTKLGKIKYK----SHEEQQAENHRKMFIA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M +++RVI++KLADRLHNMRTL H+P  KQ  IA ETL++FAPLA  LG+ ++K ELE+ 
Sbjct: 131 MAQDIRVILIKLADRLHNMRTLKHLPVEKQRRIANETLEIFAPLAHRLGISRVKWELEDT 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           +  Y N + Y     R+  L K+     E     ++  + ++  LD + ++ +I    K 
Sbjct: 191 ALRYLNPQQYY----RIVHLMKQKRDARERYLHDVIDGVNEN--LDELNIQADISGRPKH 244

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIY+ + +     NE+  +  +RI++            S  + CY VLG++H  W P+
Sbjct: 245 IYSIYRKMSEQNKQFNEIYDLLAVRIVV------------SSIKDCYAVLGIIHTRWKPM 292

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK N YQS+HTT+I    E    LEVQIRT EM  IAE G+AAH+     
Sbjct: 293 PGRFKDYIAMPKSNMYQSIHTTVIGPQGEP---LEVQIRTHEMHQIAEYGVAAHW----- 344

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
                  A   G+    KT   N      +++W   I E+Q E   +  + EF++++  D
Sbjct: 345 -------AYKEGKVVNSKTSFDN------KLTWFREILEYQNE---SDNAEEFMESLKLD 388

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           L    V+VFTP+G++  LP G+  +D+AY +HTEIGNK + AK+NG +V+  + L   ++
Sbjct: 389 LFSDVVYVFTPKGDVYELPNGSVPLDFAYRVHTEIGNKTIGAKINGKIVTLDYKLKTGDI 448

Query: 620 VEIITYNVSF 629
           ++I+T   S+
Sbjct: 449 IDILTSKHSY 458


>gi|126660186|ref|ZP_01731304.1| (p)ppGpp 3'-pyrophosphohydrolase [Cyanothece sp. CCY0110]
 gi|126618551|gb|EAZ89302.1| (p)ppGpp 3'-pyrophosphohydrolase [Cyanothece sp. CCY0110]
          Length = 744

 Score =  341 bits (874), Expect = 8e-91,   Method: Compositional matrix adjust.
 Identities = 204/498 (40%), Positives = 288/498 (57%), Gaps = 47/498 (9%)

Query: 127 PERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELE 186
           P+ L E L    S  +  +L+L+ RA   A++ H+GQ R+SGEP+I HPV VA IL +L 
Sbjct: 17  PDWLNECLISHESDQNNQDLDLICRAFNFAYKLHEGQARKSGEPYIAHPVAVAGILRDLG 76

Query: 187 LDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQ 246
            D   IAAG LHD VEDT+V T E IEE FG  V  +VEG TK+SK      K E     
Sbjct: 77  GDKAMIAAGFLHDVVEDTDV-TVEEIEEMFGHEVALLVEGVTKLSKFN-FSNKTEQ---- 130

Query: 247 DVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKL 306
             +A++ R+MFLAM +++RVI+VKLADRLHNMRTL  + P KQ  IA ET ++FAPLA  
Sbjct: 131 --QAENFRRMFLAMAKDIRVIVVKLADRLHNMRTLEPLRPEKQRRIARETKEIFAPLANR 188

Query: 307 LGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDL 366
           LG++++K ELE+LSF Y   EDY +++  +++   + E  +E     L K++ DD  + +
Sbjct: 189 LGIWRVKWELEDLSFKYLEPEDYREIQNLISEKRIDRETRIETVKNTLQKRL-DDMGISI 247

Query: 367 MTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICY 426
           +    E++   K  Y IY  + +     +E+  +A LRII+K              + CY
Sbjct: 248 L----ELQGRPKHLYGIYFKMQRQNKGFHEIYDLAALRIIVK------------TNEECY 291

Query: 427 HVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIA 486
             L +VH ++ P+P   KDYI  PKPN YQSLHTT++     +   LE+QIRT EM  IA
Sbjct: 292 RALAVVHDVFKPMPGRFKDYIGLPKPNRYQSLHTTVVGL---NGRPLEIQIRTLEMHHIA 348

Query: 487 ERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGN 546
           E GIAAH+  +   TG   H               + +N   + +WL  + +WQ +    
Sbjct: 349 EYGIAAHWKYK--ETGGSNHT--------------HFSNEDEKFTWLRQLLDWQNDL--- 389

Query: 547 MTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGN 606
              +E+VD +  +L    V+VFTP G++ +L +GAT VD+AY IHTE+GN M  A++NG 
Sbjct: 390 KDDQEYVDNLKDNLFDDDVYVFTPNGDVISLSRGATAVDFAYRIHTEVGNHMKGARINGK 449

Query: 607 LVSPTHVLANAEVVEIIT 624
                  L N ++VEIIT
Sbjct: 450 WSVLDQPLHNGDIVEIIT 467


>gi|319789117|ref|YP_004150750.1| (p)ppGpp synthetase I, SpoT/RelA [Thermovibrio ammonificans HB-1]
 gi|317113619|gb|ADU96109.1| (p)ppGpp synthetase I, SpoT/RelA [Thermovibrio ammonificans HB-1]
          Length = 717

 Score =  341 bits (874), Expect = 8e-91,   Method: Compositional matrix adjust.
 Identities = 203/482 (42%), Positives = 282/482 (58%), Gaps = 53/482 (10%)

Query: 147 ELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNV 206
           EL+ +A   A E H GQ R+SGEPF  HP EVA IL EL +D  +I AGLLHDTVEDT+ 
Sbjct: 21  ELIEKAYNFAKEKHKGQYRKSGEPFFSHPAEVAYILAELRMDVPTIVAGLLHDTVEDTDT 80

Query: 207 VTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRV 266
            T E IE EFG+ V  IV+G TK+    +   K E        A+  R + +++ E++RV
Sbjct: 81  -TIEEIEREFGSEVAFIVKGVTKLEGY-RFTSKEE------ADAESFRNLLISLAEDIRV 132

Query: 267 IIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNA 326
           +IVKLADRLHNMRTL HM    Q   A ETL ++APLA  LGMY+IK+ELE+LS  Y + 
Sbjct: 133 LIVKLADRLHNMRTLEHMKRESQLRNAKETLTIYAPLANRLGMYRIKNELEDLSLKYIDP 192

Query: 327 EDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKA 386
           E YA+++R+V ++ +     LE+  + + +++E +       +K +I+   K  Y IY+ 
Sbjct: 193 EAYAEIERKVKEVKRRLLPYLEDVIETVKRELERN------GIKGDIQWRIKHIYGIYRK 246

Query: 387 VLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDY 446
           ++       EV  +A +R+I                  CY VLG++H IWTP+P  +KDY
Sbjct: 247 MVTKGIPFEEVYDVAGIRVI------------TDTVANCYQVLGIIHSIWTPVPGRIKDY 294

Query: 447 IATPKPNGYQSLHTTLI-PFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVG 505
           IA PKPN YQSLHTT++ P   +  F +E QIRT +M  +AE GIAAH+           
Sbjct: 295 IAVPKPNMYQSLHTTVVGP---KGQF-IEFQIRTWKMHQVAEFGIAAHWK---------- 340

Query: 506 HARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSRV 565
           +    GR        L+ +    R  WL  + EW +E       +EF+D++  DL    +
Sbjct: 341 YKEGGGR--------LDESE-KERFLWLRNLLEWVKE---EKDPKEFIDSVRTDLYNENI 388

Query: 566 FVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITY 625
           +VFTP+G+IK LP GAT VD+AY +HT +G++  AAKVNG LV   + L + + VEIIT 
Sbjct: 389 YVFTPKGDIKTLPVGATPVDFAYAVHTSVGHRCRAAKVNGKLVPLNYRLQSGDRVEIITG 448

Query: 626 NV 627
           NV
Sbjct: 449 NV 450


>gi|334127724|ref|ZP_08501627.1| GTP diphosphokinase [Centipeda periodontii DSM 2778]
 gi|333388860|gb|EGK60030.1| GTP diphosphokinase [Centipeda periodontii DSM 2778]
          Length = 743

 Score =  341 bits (874), Expect = 8e-91,   Method: Compositional matrix adjust.
 Identities = 195/490 (39%), Positives = 290/490 (59%), Gaps = 50/490 (10%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           SY +  +LE +RRA + A +AH GQ R SG+ +I+HP+ VA IL  L LD E+I A LLH
Sbjct: 20  SYQADADLEKIRRAYVYAEKAHSGQVRISGDAYIMHPLNVAYILTSLHLDDETICAALLH 79

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT   T E +E +FG  +  +++G   V+KLG++    E  S +DVK ++ R+MFL
Sbjct: 80  DVVEDT-CATLEEMEAQFGKNIMELIDG---VTKLGRI----EYMSKEDVKLENYRKMFL 131

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM +++RVI++KLADRLHNMRTL +M   K+  IA ETL+V+APLA  LG+  IK ELE+
Sbjct: 132 AMAKDIRVIMIKLADRLHNMRTLKYMREDKRHRIAKETLEVYAPLANRLGISNIKVELED 191

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
           L   Y   E Y  +   V    +E +  + E+ + + +K+E      +  ++ EI+   K
Sbjct: 192 LCLRYLEPEAYYALVEEVKHKRQERQDFIRESIQQIREKLE------VAGIEAEIKGRAK 245

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIY+ + +   S+NE+  ++ +R+++            S  + CY VLG++H +W P
Sbjct: 246 HFYSIYRKMKRDNKSVNEIYDLSAVRVLV------------SSVKDCYGVLGVIHAMWKP 293

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           IP   KDYIA PK NGYQSLHTT++         LE+QIRT+ M  ++E GIAAH+  + 
Sbjct: 294 IPGRFKDYIAMPKSNGYQSLHTTVMTH----GDPLEIQIRTKAMHQVSEFGIAAHWKYK- 348

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                            G+++   + N   ++SWL  +   Q+E+      +EF + +  
Sbjct: 349 ---------------EAGRSIGATDEN-DQKMSWLRQMVSLQQEYD---DPKEFFEALKL 389

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           D+    VFVFTPRG++ +LPKG+  +D+AY IHTEIG+  V AKVNG +V   + L N +
Sbjct: 390 DVFSDEVFVFTPRGDVIDLPKGSNPIDFAYHIHTEIGHHCVGAKVNGKIVPLEYKLKNGD 449

Query: 619 VVEIITYNVS 628
           +V I+T   S
Sbjct: 450 IVSIVTNKAS 459


>gi|47094426|ref|ZP_00232112.1| GTP pyrophosphokinase [Listeria monocytogenes str. 4b H7858]
 gi|47017201|gb|EAL08048.1| GTP pyrophosphokinase [Listeria monocytogenes str. 4b H7858]
          Length = 724

 Score =  341 bits (874), Expect = 8e-91,   Method: Compositional matrix adjust.
 Identities = 194/490 (39%), Positives = 293/490 (59%), Gaps = 50/490 (10%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++   L LV++A   A ++H  Q R+SGEP+IIHP++VA IL EL++D  ++A+G LHD
Sbjct: 5   YMNQEHLALVKKAYEFARDSHKEQFRKSGEPYIIHPIQVAGILVELKMDPSTVASGFLHD 64

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            VEDT  VT   +EE FG+ V  +V+G   V+KLGK+K K    S ++ +A++ R+MF+A
Sbjct: 65  VVEDT-PVTLADLEEVFGSEVAMLVDG---VTKLGKIKYK----SHEEQQAENHRKMFIA 116

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M +++RVI++KLADRLHNMRTL H+P  KQ  IA ETL++FAPLA  LG+ ++K ELE+ 
Sbjct: 117 MAQDIRVILIKLADRLHNMRTLKHLPVEKQRRIANETLEIFAPLAHRLGISRVKWELEDT 176

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           +  Y N + Y     R+  L K+     E     ++  + ++  LD + ++ +I    K 
Sbjct: 177 ALRYLNPQQYY----RIVHLMKQKRDARERYLHDVIDGVNEN--LDELNIQADISGRPKH 230

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIY+ + +     NE+  +  +RI++            S  + CY VLG++H  W P+
Sbjct: 231 IYSIYRKMSEQNKQFNEIYDLLAVRIVV------------SSIKDCYAVLGIIHTRWKPM 278

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK N YQS+HTT+I    E    LEVQIRT EM  IAE G+AAH+     
Sbjct: 279 PGRFKDYIAMPKSNMYQSIHTTVIGPQGEP---LEVQIRTHEMHQIAEYGVAAHW----- 330

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
                  A   G+    KT   N      +++W   I E+Q E   +  + EF++++  D
Sbjct: 331 -------AYKEGKVVNSKTSFDN------KLTWFREILEYQNE---SDNAEEFMESLKLD 374

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           L    V+VFTP+G++  LP G+  +D+AY +HTEIGNK + AK+NG +V+  + L   ++
Sbjct: 375 LFSDVVYVFTPKGDVYELPNGSVPLDFAYRVHTEIGNKTIGAKINGKIVTLDYKLKTGDI 434

Query: 620 VEIITYNVSF 629
           ++I+T   S+
Sbjct: 435 IDILTSKHSY 444


>gi|46907751|ref|YP_014140.1| GTP pyrophosphokinase [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|226224124|ref|YP_002758231.1| (p)ppGpp synthetase [Listeria monocytogenes serotype 4b str. CLIP
           80459]
 gi|254824418|ref|ZP_05229419.1| GTP pyrophosphokinase [Listeria monocytogenes FSL J1-194]
 gi|254852146|ref|ZP_05241494.1| GTP pyrophosphokinase [Listeria monocytogenes FSL R2-503]
 gi|254931458|ref|ZP_05264817.1| GTP pyrophosphokinase [Listeria monocytogenes HPB2262]
 gi|300764810|ref|ZP_07074800.1| GTP pyrophosphokinase [Listeria monocytogenes FSL N1-017]
 gi|386732261|ref|YP_006205757.1| (p)ppGpp synthetase [Listeria monocytogenes 07PF0776]
 gi|404281082|ref|YP_006681980.1| GTP pyrophosphokinase [Listeria monocytogenes SLCC2755]
 gi|404286945|ref|YP_006693531.1| GTP pyrophosphokinase [Listeria monocytogenes serotype 7 str.
           SLCC2482]
 gi|405749867|ref|YP_006673333.1| GTP pyrophosphokinase [Listeria monocytogenes ATCC 19117]
 gi|405752743|ref|YP_006676208.1| GTP pyrophosphokinase [Listeria monocytogenes SLCC2378]
 gi|405755681|ref|YP_006679145.1| GTP pyrophosphokinase [Listeria monocytogenes SLCC2540]
 gi|406704296|ref|YP_006754650.1| GTP pyrophosphokinase [Listeria monocytogenes L312]
 gi|417316063|ref|ZP_12102721.1| (p)ppGpp synthetase [Listeria monocytogenes J1816]
 gi|424714398|ref|YP_007015113.1| GTP pyrophosphokinase [Listeria monocytogenes serotype 4b str.
           LL195]
 gi|424823285|ref|ZP_18248298.1| GTP pyrophosphokinase [Listeria monocytogenes str. Scott A]
 gi|46881020|gb|AAT04317.1| GTP pyrophosphokinase [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|225876586|emb|CAS05295.1| Putative (p)ppGpp synthetase [Listeria monocytogenes serotype 4b
           str. CLIP 80459]
 gi|258605450|gb|EEW18058.1| GTP pyrophosphokinase [Listeria monocytogenes FSL R2-503]
 gi|293583010|gb|EFF95042.1| GTP pyrophosphokinase [Listeria monocytogenes HPB2262]
 gi|293593653|gb|EFG01414.1| GTP pyrophosphokinase [Listeria monocytogenes FSL J1-194]
 gi|300514486|gb|EFK41543.1| GTP pyrophosphokinase [Listeria monocytogenes FSL N1-017]
 gi|328465560|gb|EGF36789.1| (p)ppGpp synthetase [Listeria monocytogenes J1816]
 gi|332311965|gb|EGJ25060.1| GTP pyrophosphokinase [Listeria monocytogenes str. Scott A]
 gi|384391019|gb|AFH80089.1| (p)ppGpp synthetase [Listeria monocytogenes 07PF0776]
 gi|404219067|emb|CBY70431.1| GTP pyrophosphokinase [Listeria monocytogenes ATCC 19117]
 gi|404221943|emb|CBY73306.1| GTP pyrophosphokinase [Listeria monocytogenes SLCC2378]
 gi|404224881|emb|CBY76243.1| GTP pyrophosphokinase [Listeria monocytogenes SLCC2540]
 gi|404227717|emb|CBY49122.1| GTP pyrophosphokinase [Listeria monocytogenes SLCC2755]
 gi|404245874|emb|CBY04099.1| GTP pyrophosphokinase [Listeria monocytogenes serotype 7 str.
           SLCC2482]
 gi|406361326|emb|CBY67599.1| GTP pyrophosphokinase [Listeria monocytogenes L312]
 gi|424013582|emb|CCO64122.1| GTP pyrophosphokinase [Listeria monocytogenes serotype 4b str.
           LL195]
          Length = 738

 Score =  341 bits (874), Expect = 9e-91,   Method: Compositional matrix adjust.
 Identities = 194/490 (39%), Positives = 293/490 (59%), Gaps = 50/490 (10%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++   L LV++A   A ++H  Q R+SGEP+IIHP++VA IL EL++D  ++A+G LHD
Sbjct: 19  YMNQEHLALVKKAYEFARDSHKEQFRKSGEPYIIHPIQVAGILVELKMDPSTVASGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            VEDT  VT   +EE FG+ V  +V+G   V+KLGK+K K    S ++ +A++ R+MF+A
Sbjct: 79  VVEDT-PVTLADLEEVFGSEVAMLVDG---VTKLGKIKYK----SHEEQQAENHRKMFIA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M +++RVI++KLADRLHNMRTL H+P  KQ  IA ETL++FAPLA  LG+ ++K ELE+ 
Sbjct: 131 MAQDIRVILIKLADRLHNMRTLKHLPVEKQRRIANETLEIFAPLAHRLGISRVKWELEDT 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           +  Y N + Y     R+  L K+     E     ++  + ++  LD + ++ +I    K 
Sbjct: 191 ALRYLNPQQYY----RIVHLMKQKRDARERYLHDVIDGVNEN--LDELNIQADISGRPKH 244

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIY+ + +     NE+  +  +RI++            S  + CY VLG++H  W P+
Sbjct: 245 IYSIYRKMSEQNKQFNEIYDLLAVRIVV------------SSIKDCYAVLGIIHTRWKPM 292

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK N YQS+HTT+I    E    LEVQIRT EM  IAE G+AAH+     
Sbjct: 293 PGRFKDYIAMPKSNMYQSIHTTVIGPQGEP---LEVQIRTHEMHQIAEYGVAAHW----- 344

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
                  A   G+    KT   N      +++W   I E+Q E   +  + EF++++  D
Sbjct: 345 -------AYKEGKVVNSKTSFDN------KLTWFREILEYQNE---SDNAEEFMESLKLD 388

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           L    V+VFTP+G++  LP G+  +D+AY +HTEIGNK + AK+NG +V+  + L   ++
Sbjct: 389 LFSDVVYVFTPKGDVYELPNGSVPLDFAYRVHTEIGNKTIGAKINGKIVTLDYKLKTGDI 448

Query: 620 VEIITYNVSF 629
           ++I+T   S+
Sbjct: 449 IDILTSKHSY 458


>gi|94967206|ref|YP_589254.1| (p)ppGpp synthetase SpoT/RelA [Candidatus Koribacter versatilis
           Ellin345]
 gi|94549256|gb|ABF39180.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA
           [Candidatus Koribacter versatilis Ellin345]
          Length = 740

 Score =  341 bits (874), Expect = 9e-91,   Method: Compositional matrix adjust.
 Identities = 189/481 (39%), Positives = 295/481 (61%), Gaps = 53/481 (11%)

Query: 144 NELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVED 203
           +++E+V++A   + + H GQ R SGEP+++HP+EV  IL ++ LD  +IAAGLLHD+VED
Sbjct: 32  DDIEIVKKAFEFSQKHHAGQTRASGEPYLVHPLEVGIILADMRLDTTAIAAGLLHDSVED 91

Query: 204 TNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEE 263
           T+V T E I+E+FG  V  IVEG TK+S++       +  S ++ +A+++R+M LAM ++
Sbjct: 92  TSV-TIEEIQEQFGEQVAHIVEGVTKISRI-------DFASREEAQAENVRKMVLAMVDD 143

Query: 264 VRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMY 323
           +RV+++KLADRLHNMRTL H+   +Q  IA ETL+++AP+A  LGM +++ ELE+L+F Y
Sbjct: 144 IRVVLIKLADRLHNMRTLQHLSQERQEKIARETLEIYAPIAHRLGMGRVRGELEDLAFPY 203

Query: 324 TNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSI 383
            +   Y +V+  V    K+ E+ LE+   ++  K++++      ++   + S  K  YSI
Sbjct: 204 VDPIGYKRVEEAVESRRKKGEEFLEQVKGVITAKLKEN------SIDARVDSRIKRLYSI 257

Query: 384 YKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAM 443
            + +++ R  + +V  +  LRII K    S V         CY +LG++H +W P+P  +
Sbjct: 258 NQKLIRQRIDVEQVYDMYALRIITK----SVVD--------CYSILGIIHNLWRPVPGRI 305

Query: 444 KDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGL 503
           KD+IA P+PN YQSLHTT+I    E+    EVQIRTEEM  +AE GIAAH+    +  G 
Sbjct: 306 KDFIAMPRPNFYQSLHTTVIA---ENGNPFEVQIRTEEMHKLAEEGIAAHWK---YKDGP 359

Query: 504 VGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGS 563
           +                  +A    R++WL  + EWQ +        EF+ ++  DL   
Sbjct: 360 I------------------SAKDEQRLAWLRQVVEWQRDV---QDPGEFLSSLKIDLYPE 398

Query: 564 RVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEII 623
            V+ F+P+G+I  LP+ AT +D+AY IHTE+G+  V AKVNG +V   + L + ++VEI+
Sbjct: 399 EVYTFSPKGKIVILPRDATPLDFAYTIHTEVGHTCVGAKVNGRIVPLRYKLRSGDIVEIL 458

Query: 624 T 624
           T
Sbjct: 459 T 459


>gi|295426083|ref|ZP_06818753.1| GTP diphosphokinase [Lactobacillus amylolyticus DSM 11664]
 gi|295064252|gb|EFG55190.1| GTP diphosphokinase [Lactobacillus amylolyticus DSM 11664]
          Length = 749

 Score =  340 bits (873), Expect = 9e-91,   Method: Compositional matrix adjust.
 Identities = 198/485 (40%), Positives = 284/485 (58%), Gaps = 49/485 (10%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++  ++  V +A   A +AH GQKR SG+P+I+HP +VA  L  L LD ++IAAG LHD
Sbjct: 19  YMNDEQIAFVEKAYEFANKAHAGQKRASGQPYIMHPTQVAGTLAALGLDPDTIAAGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
           TVEDT  VT + I++EFG  V  IV+G   V+KL K + K    S Q+  A++ R+M +A
Sbjct: 79  TVEDT-PVTNDDIKKEFGEDVAFIVDG---VTKLNKYQYK----SHQEFLAENHRKMLIA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M +++RVI+VKLADRLHNM TL H+ P KQ  IA+ET+ ++APLA  LG+  IK ELE++
Sbjct: 131 MAKDLRVIMVKLADRLHNMHTLQHLRPDKQRRIASETMDIYAPLADRLGIGTIKWELEDM 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           SF Y N E Y ++   VA    E EK + +A  +L K       LD + +K EI    K 
Sbjct: 191 SFHYLNPEAYYRIVNLVAVKRSEREKYISDAISVLKKT------LDNLGIKYEIYGRPKH 244

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIYK ++      +E+  +  +R+I+K              + CY VLG VH  W P+
Sbjct: 245 IYSIYKKMVNKHKDFDEIYDLLAVRVIVK------------TVRDCYAVLGAVHTEWKPM 292

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK NGYQSLHTT+I         LE+QIRT++M  +AE G+AAH++ +  
Sbjct: 293 PGRFKDYIAVPKVNGYQSLHTTIIG---PGGRPLEIQIRTQQMHEVAEYGVAAHWAYK-- 347

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
                          RG    +   +   ++     I E ++E      + EF+ ++  D
Sbjct: 348 ---------------RGNFSGVQETSSGDKLDMFREILELKDE---TKDADEFMKSVKSD 389

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           +   RV+VFTP+GE+  LPKG+  +D+AY IHT++G+  V AKVN  LV   + L N +V
Sbjct: 390 IFSDRVYVFTPKGEVYELPKGSVTLDFAYAIHTQVGSHAVGAKVNNKLVPLDYKLKNGDV 449

Query: 620 VEIIT 624
           ++I+T
Sbjct: 450 IDIMT 454


>gi|374337215|ref|YP_005093915.1| GTP pyrophosphokinase [Streptococcus macedonicus ACA-DC 198]
 gi|372283315|emb|CCF01484.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Streptococcus
           macedonicus ACA-DC 198]
          Length = 739

 Score =  340 bits (873), Expect = 9e-91,   Method: Compositional matrix adjust.
 Identities = 192/494 (38%), Positives = 299/494 (60%), Gaps = 49/494 (9%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  Y+S +++ +V++AL  A +AH  Q R+SGEP+IIHP++VA IL +L LD  ++A G 
Sbjct: 16  TAQYMSESDVAIVQKALDYATKAHISQVRQSGEPYIIHPIQVAGILADLHLDVVTVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT V T + IE EFG  VR IV+G   V+KLGK++ K+    +    A++ R+M
Sbjct: 76  LHDVVEDTEV-TLDDIEAEFGKDVRDIVDG---VTKLGKVEYKSHEEQL----AENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM++++RVI+VKLADRLHNMRTL H+   KQ  I+ ET++++APLA  LG+ +IK EL
Sbjct: 128 LMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y N  ++ K+   + +  +E E  ++E    ++KKI+D  +     +  E+   
Sbjct: 188 EDLSFRYLNEIEFYKISHMMNEKRREREALVDE----IVKKIKD--YTQEQGLYGEVYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSIY+ +   +   +++  +  +R I++           +P  + Y ++G +H +W
Sbjct: 242 PKHIYSIYRKMRDKKKRFDQIYDLIAIRCIME-----------TPSDV-YAMVGYIHELW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA PK NGYQS+HTT    +Y     +E+QIRT+EM  +AE G+AAH++ 
Sbjct: 290 RPMPGRFKDYIAAPKANGYQSIHTT----VYGPKGPIEIQIRTKEMHQVAEYGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  + G V                 +N    + ++W+  + E Q+    N  + +FVD++
Sbjct: 346 KQGIKGKV-----------------DNQEQVVGMNWIKELVELQD--ASNGDAVDFVDSV 386

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
            +D+   R++VFTP G ++ LPK +  +D+AY IHT++G K V AKVNG +V  T  L  
Sbjct: 387 KQDIFSERIYVFTPTGAVQELPKDSGPIDFAYAIHTQVGEKAVGAKVNGRMVPLTAKLKT 446

Query: 617 AEVVEIITYNVSFS 630
            +VVEI+T   SF 
Sbjct: 447 GDVVEIVTNPNSFG 460


>gi|384044791|ref|YP_005492808.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(PpGpp
           synthetase I) ((P)ppGpp synthetase) [Bacillus megaterium
           WSH-002]
 gi|345442482|gb|AEN87499.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(PpGpp
           synthetase I) ((P)ppGpp synthetase) [Bacillus megaterium
           WSH-002]
          Length = 732

 Score =  340 bits (873), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 195/493 (39%), Positives = 297/493 (60%), Gaps = 51/493 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YLS  ++  V++A   A EAH  Q R+SGEP+IIHP++VA IL +L++D  +IAAG 
Sbjct: 16  TKRYLSEEDVAFVQKAYDFAKEAHKEQYRKSGEPYIIHPIQVAGILVDLDMDPATIAAGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT + T + +E+ F   V  +V+G   V+KLGK+K K    S ++ +A++ R+M
Sbjct: 76  LHDVVEDTEI-TLKDLEKAFNEEVAMLVDG---VTKLGKIKYK----SKEEQQAENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
           F+AM +++RVI++KLADRLHNMRTL H+P  KQ  I+ ETL++FAPLA  LG+ +IK EL
Sbjct: 128 FVAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRISNETLEIFAPLAHRLGISKIKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+ +  Y N + Y     R+ +L K+   E E+    ++ ++ +   +D +++K EI   
Sbjct: 188 EDTALRYLNPQQYY----RIVNLMKKKRAEREQYLAEVIDEVREQ--VDEVSIKVEISGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSIY+ +       NE+  +  +RII+            +  + CY VLG++H  W
Sbjct: 242 PKHIYSIYRKMALQNKQFNEIYDLLAVRIIV------------NSIKDCYAVLGIIHTCW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA PK N YQSLHTT+I    +    LEVQIRT +M  IAE GIAAH++ 
Sbjct: 290 KPMPGRFKDYIAMPKQNMYQSLHTTVIGPKGDP---LEVQIRTFDMHQIAEYGIAAHWAY 346

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +                  GKT    +A+   +++W   I E+Q +      + EF++++
Sbjct: 347 K-----------------EGKTA--EHASFEEKLTWFREILEFQND---ANDAEEFMESL 384

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             DL    V++FTP+G++  LP G+  +D++Y IH+EIGNK + AKVNG +V+  + L  
Sbjct: 385 KVDLFSDMVYIFTPKGDVIELPSGSVPIDFSYRIHSEIGNKTIGAKVNGKMVTLDYRLKT 444

Query: 617 AEVVEIITYNVSF 629
            +++EI+T   S+
Sbjct: 445 GDIIEILTSKHSY 457


>gi|241889887|ref|ZP_04777185.1| GTP pyrophosphokinase [Gemella haemolysans ATCC 10379]
 gi|241863509|gb|EER67893.1| GTP pyrophosphokinase [Gemella haemolysans ATCC 10379]
          Length = 725

 Score =  340 bits (873), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 193/485 (39%), Positives = 292/485 (60%), Gaps = 50/485 (10%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           YLS  ++E++R+A   A +AH+GQ R+SGEP+I+HPV+VA IL EL+LD+ +I AG LHD
Sbjct: 19  YLSDEQIEIIRKAYEFAKDAHEGQFRKSGEPYILHPVQVAGILTELKLDYATICAGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            VEDT   TF+ I+E FG  +  IV+G   V+KL K+K +++  S    +A++ R++F++
Sbjct: 79  VVEDTKY-TFDDIKETFGEDIAVIVDG---VTKLDKVKFRSKKQS----QAENHRKLFVS 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           + +++RVI VKLADRLHNMRT+ +M   KQ  I++ETL+++APLA  LG+  +K ELE+ 
Sbjct: 131 IAKDLRVIFVKLADRLHNMRTMKYMREEKQREISSETLEIYAPLAHRLGISSVKWELEDT 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           S  Y +   Y  +   +       EK +++A   +   + D+       +K ++    K 
Sbjct: 191 SLRYLHPSQYFSIVGMMKQKRSAREKSIKDACSSITSILADN------NIKAQVTGRPKH 244

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIYK ++K   + +++  +  +R+++       V         CY  LGLV+ +W PI
Sbjct: 245 IYSIYKKMVKQNKTFDQIYDLLAVRVLV-----DSVAD-------CYATLGLVNNLWVPI 292

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P  +KDYIA PKPN YQSLHTT+I    ++   LEVQIRT EM  IAE+GIAAH++ +  
Sbjct: 293 PGRIKDYIAMPKPNMYQSLHTTVIAPDGQT---LEVQIRTYEMHEIAEKGIAAHWAYK-- 347

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
                           GK V  NN N   +++W   I E  E      T+  F++++  D
Sbjct: 348 ---------------EGKKVNKNN-NFYEKLNWFQKIAENDE---TEATAESFMESLKVD 388

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           LL  +++VFTP  +I  LPKG+ +VD+AY IH+E+GNKMV A VN  +    +VL+  E+
Sbjct: 389 LLSDKIYVFTPNSDIIELPKGSCIVDFAYAIHSEVGNKMVGATVNDKIEPFDYVLSTGEI 448

Query: 620 VEIIT 624
            +I T
Sbjct: 449 CDIRT 453


>gi|168179553|ref|ZP_02614217.1| GTP pyrophosphokinase [Clostridium botulinum NCTC 2916]
 gi|182669850|gb|EDT81826.1| GTP pyrophosphokinase [Clostridium botulinum NCTC 2916]
          Length = 723

 Score =  340 bits (873), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 201/501 (40%), Positives = 289/501 (57%), Gaps = 63/501 (12%)

Query: 130 LWEDLRPTISY-LSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
           + EDL   I Y  +  E+E +++A   A  AH  QKR SGEP+I HP EVA IL E+ +D
Sbjct: 1   MLEDLMIKIKYSFTEKEIEFIKKAYNFACNAHKEQKRISGEPYITHPEEVAIILFEMGMD 60

Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
             ++ AGL+HD VEDT   T+E + +EFG  V  +V G   V+KLGK++ K +    ++ 
Sbjct: 61  VNTMIAGLMHDVVEDTQY-TYEDVAKEFGNEVADLVNG---VTKLGKIEYKTK----EEQ 112

Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
           +AD++R+M LAMT+++RVI++KLADRLHNMRTL  MP  KQ   A ETL ++APLA  LG
Sbjct: 113 QADNVRKMLLAMTKDIRVILIKLADRLHNMRTLRFMPVEKQKEKAQETLDIYAPLAHRLG 172

Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
           + +IK ELE+LSF Y N  +Y  + R++A+   E E+ ++E    L       Q L    
Sbjct: 173 ISKIKWELEDLSFRYINPNEYYFLVRKIAEKRAEREEHIKEIISNLQ------QNLKRSG 226

Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
           +++EI    K  YSIYK +     +++++  +  +RI            L    + CY  
Sbjct: 227 IESEIDGRPKHFYSIYKKMHNKNKNLDQIFDLTAVRI------------LVDTVKDCYAA 274

Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMD 483
           LG+ H ++ PIP   KDYIA PKPN YQSLH+T++     PF        E+QIRT EM 
Sbjct: 275 LGIAHTVYKPIPGRFKDYIAMPKPNMYQSLHSTVMGVGGRPF--------EIQIRTYEMH 326

Query: 484 LIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEF 543
             AE GIAAH+                    + K    N+ NI L+++WL  + +WQ+E 
Sbjct: 327 KTAEYGIAAHW--------------------KYKEDVENSNNIDLKLTWLREMLDWQKE- 365

Query: 544 VGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKV 603
                  EF+     DL    VFVFTP+G++ +LP  AT VD+AY IHT+IG++ + AKV
Sbjct: 366 --TTDPEEFMQGFKIDLFSDEVFVFTPKGKVISLPNKATPVDFAYKIHTDIGHRCIGAKV 423

Query: 604 NGNLVSPTHVLANAEVVEIIT 624
           NG +V   + L   E++E++T
Sbjct: 424 NGKMVPLDYELKTGEIIEVLT 444


>gi|262199001|ref|YP_003270210.1| (p)ppGpp synthetase I SpoT/RelA [Haliangium ochraceum DSM 14365]
 gi|262082348|gb|ACY18317.1| (p)ppGpp synthetase I, SpoT/RelA [Haliangium ochraceum DSM 14365]
          Length = 728

 Score =  340 bits (873), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 195/497 (39%), Positives = 291/497 (58%), Gaps = 52/497 (10%)

Query: 129 RLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
           RL   L    +Y + ++ EL+RRA   A EAH+GQ RRSG+P++ HP+ VA I+ +L LD
Sbjct: 3   RLDNILDTVSTYDAKSDTELIRRAYEYAAEAHEGQTRRSGDPYVTHPLSVAGIVADLRLD 62

Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
             +I A LLHD VEDT+  T E I   FG  V  +V+G   V+KLGKL       S ++ 
Sbjct: 63  GATICAALLHDAVEDTS-ATIEDITSMFGKEVAFLVDG---VTKLGKLPYT----SREER 114

Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
           +A++ R+M LAM  ++RVI++K  DRL NMRTL H+P  KQ  IA+ETLQ++APLA  +G
Sbjct: 115 QAENFRKMLLAMARDIRVILLKFCDRLDNMRTLDHLPSEKQERIASETLQIYAPLAHRIG 174

Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
           +  IK+ELE+LSF Y   E+Y  +   VA   KE  + + +  +++ K++  +      +
Sbjct: 175 IQWIKTELEDLSFKYLYREEYDDLAGDVAKTRKERNRYIVDVERLIYKEMAKN------S 228

Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
           V+ ++    K  +SI + + +++   NE++     R++ +             Q+ CY  
Sbjct: 229 VRCKVTGRAKHLWSIRQKMQRTKRPYNEIHDAIGFRVVTE------------NQRGCYEA 276

Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAER 488
           LG+VH  WTPIP   KDYIA PKPNGYQSLHT +I    E   R+E+QIRT+EM  +AE 
Sbjct: 277 LGVVHAAWTPIPGRFKDYIALPKPNGYQSLHTAVIGPKGE---RIEIQIRTDEMHAVAEY 333

Query: 489 GIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMT 548
           GIAAH+                 +   GK   LN ++   + +WL  + E Q++      
Sbjct: 334 GIAAHW-----------------KYKEGKPAVLNGSDA--KFAWLRQLMESQKDL---KD 371

Query: 549 SREFVDTITRDLLG-SRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNL 607
             EF++++  DL G   VFVFTP+G++K LP G+  +D+AY +H+++G+    A+VNG +
Sbjct: 372 PTEFIESVKIDLFGEDEVFVFTPQGDVKALPMGSCPIDFAYTVHSKVGDHCSGARVNGMI 431

Query: 608 VSPTHVLANAEVVEIIT 624
           V   + L N + VEIIT
Sbjct: 432 VPLRYQLRNGDTVEIIT 448


>gi|227534968|ref|ZP_03965017.1| GTP pyrophosphokinase [Lactobacillus paracasei subsp. paracasei
           ATCC 25302]
 gi|239631387|ref|ZP_04674418.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
           [Lactobacillus paracasei subsp. paracasei 8700:2]
 gi|301066581|ref|YP_003788604.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
           [Lactobacillus casei str. Zhang]
 gi|417980818|ref|ZP_12621497.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
           12A]
 gi|417986894|ref|ZP_12627458.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
           32G]
 gi|417999269|ref|ZP_12639480.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
           T71499]
 gi|418002217|ref|ZP_12642339.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
           UCD174]
 gi|418008131|ref|ZP_12648000.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
           UW4]
 gi|418010975|ref|ZP_12650746.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
           Lc-10]
 gi|227187425|gb|EEI67492.1| GTP pyrophosphokinase [Lactobacillus paracasei subsp. paracasei
           ATCC 25302]
 gi|239525852|gb|EEQ64853.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
           [Lactobacillus paracasei subsp. paracasei 8700:2]
 gi|300438988|gb|ADK18754.1| Guanosine polyphosphate pyrophosphohydrolase/synthetase
           [Lactobacillus casei str. Zhang]
 gi|410524265|gb|EKP99178.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
           32G]
 gi|410524329|gb|EKP99241.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
           12A]
 gi|410539545|gb|EKQ14073.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
           T71499]
 gi|410544645|gb|EKQ18966.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
           UCD174]
 gi|410547359|gb|EKQ21594.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
           UW4]
 gi|410553554|gb|EKQ27557.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
           Lc-10]
          Length = 742

 Score =  340 bits (873), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 194/486 (39%), Positives = 282/486 (58%), Gaps = 49/486 (10%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           +Y++P  L  V +A   A   H  Q R+SGEP+IIHP++VA IL EL++D  ++A+G LH
Sbjct: 18  AYMNPEHLAFVEKAYKFAAYVHKDQVRKSGEPYIIHPIQVAGILAELKMDPATVASGYLH 77

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDTN+ T   IEE FG  V  IV+G TK+SK+  +  K+E        A++ R+M L
Sbjct: 78  DVVEDTNI-TLGDIEEVFGHDVAVIVDGVTKLSKVTYVAHKDE-------LAENHRKMLL 129

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM +++RVI+VKLADRLHNMRTL H+ P KQ  IA ETL+++APLA  LG+  IK ELE+
Sbjct: 130 AMAKDLRVIMVKLADRLHNMRTLQHLRPDKQRRIANETLEIYAPLADRLGISTIKWELED 189

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
           LS  Y N + Y ++   +     E E  ++EA   + K + D      + +K EI    K
Sbjct: 190 LSLRYLNPQQYYRIAHLMNSKRTEREAYIQEAIDEIEKALAD------LHIKYEIYGRPK 243

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIYK +       +E+  +  +R+I                + CY VLG +H  W P
Sbjct: 244 HIYSIYKKMRDKHKQFDELYDLLAIRVI------------TETIKDCYAVLGAIHTKWKP 291

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PK N YQS+HTT+I  + +    LEVQIRTEEM  +AE G+AAH++ + 
Sbjct: 292 MPGRFKDYIAMPKANLYQSIHTTVIGPMGKP---LEVQIRTEEMHHVAEYGVAAHWAYK- 347

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                            G+T  +       ++     I E Q+E      + +F++++  
Sbjct: 348 ----------------EGQTSKVEYDKTGKKLDIFREILELQDE---TSDAADFMESVKG 388

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           D+   RV+VFTP+G++  LPKG+  +D+ Y++HTE+GN  V AKVNG +V   +VL N +
Sbjct: 389 DIFTDRVYVFTPKGDVYELPKGSNPLDFGYLVHTEVGNHTVGAKVNGKIVPLNYVLKNGD 448

Query: 619 VVEIIT 624
           +VE++T
Sbjct: 449 IVEMLT 454


>gi|171778853|ref|ZP_02919915.1| hypothetical protein STRINF_00774 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|379704558|ref|YP_005203017.1| GTP pyrophosphokinase (stringent response) [Streptococcus
           infantarius subsp. infantarius CJ18]
 gi|171282499|gb|EDT47923.1| RelA/SpoT family protein [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|374681257|gb|AEZ61546.1| GTP pyrophosphokinase (stringent response) [Streptococcus
           infantarius subsp. infantarius CJ18]
          Length = 740

 Score =  340 bits (873), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 191/494 (38%), Positives = 301/494 (60%), Gaps = 49/494 (9%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  Y+S +++ +V++AL  A +AH  Q R+SGEP+I+HP++VA IL +L LD  ++A G 
Sbjct: 16  TAQYMSESDVAIVQKALDYATKAHISQVRQSGEPYIVHPIQVAGILADLHLDVVTVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT V T + IE EFG  VR IV+G   V+KLGK++ K+    +    A++ R+M
Sbjct: 76  LHDVVEDTEV-TLDDIEAEFGKDVRDIVDG---VTKLGKVEYKSHEEQL----AENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM++++RVI+VKLADRLHNMRTL H+   KQ  I+ ET++++APLA  LG+ +IK EL
Sbjct: 128 LMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y N  ++ K+   + +  +E E  ++E    ++KKI+D  + +   +  ++   
Sbjct: 188 EDLSFRYLNEIEFYKISHMMNEKRREREALVDE----IVKKIKD--YTEEQGLYGDVYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSIY+ +   +   +++  +  +R I++           +P  + Y ++G +H +W
Sbjct: 242 PKHIYSIYRKMRDKKKRFDQIYDLIAIRCIME-----------TPSDV-YAMVGYIHELW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA PK NGYQS+HTT    +Y     +E+QIRT+EM  +AE G+AAH++ 
Sbjct: 290 RPMPGRFKDYIAAPKANGYQSIHTT----VYGPKGPIEIQIRTKEMHQVAEYGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  + G V                 ++   A+ +SW+  + E Q+    N  + +FVD++
Sbjct: 346 KKGIKGKV-----------------DSQEQAVGMSWIKELVELQD--ASNGDAVDFVDSV 386

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
            +D+   R++VFTP G ++ LPK +  +D+AY IHT++G K V AKVNG +V  T  L  
Sbjct: 387 KQDIFSERIYVFTPTGAVQELPKDSGPIDFAYAIHTQVGEKAVGAKVNGRMVPLTAKLKT 446

Query: 617 AEVVEIITYNVSFS 630
            +VVEI+T   SF 
Sbjct: 447 GDVVEIVTNPNSFG 460


>gi|409997388|ref|YP_006751789.1| GTP pyrophosphokinase [Lactobacillus casei W56]
 gi|406358400|emb|CCK22670.1| GTP pyrophosphokinase [Lactobacillus casei W56]
          Length = 787

 Score =  340 bits (873), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 194/486 (39%), Positives = 282/486 (58%), Gaps = 49/486 (10%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           +Y++P  L  V +A   A   H  Q R+SGEP+IIHP++VA IL EL++D  ++A+G LH
Sbjct: 63  AYMNPEHLAFVEKAYKFAAYVHKDQVRKSGEPYIIHPIQVAGILAELKMDPATVASGYLH 122

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDTN+ T   IEE FG  V  IV+G TK+SK+  +  K+E        A++ R+M L
Sbjct: 123 DVVEDTNI-TLGDIEEVFGHDVAVIVDGVTKLSKVTYVAHKDE-------LAENHRKMLL 174

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM +++RVI+VKLADRLHNMRTL H+ P KQ  IA ETL+++APLA  LG+  IK ELE+
Sbjct: 175 AMAKDLRVIMVKLADRLHNMRTLQHLRPDKQRRIANETLEIYAPLADRLGISTIKWELED 234

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
           LS  Y N + Y ++   +     E E  ++EA   + K + D      + +K EI    K
Sbjct: 235 LSLRYLNPQQYYRIAHLMNSKRTEREAYIQEAIDEIEKALAD------LHIKYEIYGRPK 288

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIYK +       +E+  +  +R+I                + CY VLG +H  W P
Sbjct: 289 HIYSIYKKMRDKHKQFDELYDLLAIRVI------------TETIKDCYAVLGAIHTKWKP 336

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PK N YQS+HTT+I  + +    LEVQIRTEEM  +AE G+AAH++ + 
Sbjct: 337 MPGRFKDYIAMPKANLYQSIHTTVIGPMGKP---LEVQIRTEEMHHVAEYGVAAHWAYK- 392

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                            G+T  +       ++     I E Q+E      + +F++++  
Sbjct: 393 ----------------EGQTSKVEYDKTGKKLDIFREILELQDE---TSDAADFMESVKG 433

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           D+   RV+VFTP+G++  LPKG+  +D+ Y++HTE+GN  V AKVNG +V   +VL N +
Sbjct: 434 DIFTDRVYVFTPKGDVYELPKGSNPLDFGYLVHTEVGNHTVGAKVNGKIVPLNYVLKNGD 493

Query: 619 VVEIIT 624
           +VE++T
Sbjct: 494 IVEMLT 499


>gi|299535673|ref|ZP_07048994.1| GTP pyrophosphokinase [Lysinibacillus fusiformis ZC1]
 gi|424739057|ref|ZP_18167479.1| GTP pyrophosphokinase [Lysinibacillus fusiformis ZB2]
 gi|298728873|gb|EFI69427.1| GTP pyrophosphokinase [Lysinibacillus fusiformis ZC1]
 gi|422946922|gb|EKU41324.1| GTP pyrophosphokinase [Lysinibacillus fusiformis ZB2]
          Length = 731

 Score =  340 bits (873), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 197/504 (39%), Positives = 298/504 (59%), Gaps = 52/504 (10%)

Query: 126 SPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGEL 185
           +PE ++E ++   SY++   +  V++A  LA +AH  Q R SGEP+IIHPV+VA IL EL
Sbjct: 8   TPEDVFELVK---SYMNDENVAFVKKAYELARDAHIEQFRSSGEPYIIHPVQVAGILAEL 64

Query: 186 ELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSV 245
           ++D E++AAG LHD VEDT+  T + +  EFG  V  +V+G   V+KLGK+K      S 
Sbjct: 65  QMDPETVAAGFLHDVVEDTDF-TRDDLVREFGEEVAVLVDG---VTKLGKIKYL----SK 116

Query: 246 QDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAK 305
           +  +A++ R+MF+AM +++RVI++KLADRLHNMRTL H+P  KQ  I+ ETL++FAPLA 
Sbjct: 117 EAQQAENHRKMFVAMAQDIRVILIKLADRLHNMRTLKHLPAEKQRRISKETLEIFAPLAH 176

Query: 306 LLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLD 365
            LG+  +K ELE+ +  Y N + Y     R+  L K+   E E   + +M +++    L+
Sbjct: 177 RLGISTVKWELEDTALRYLNPQQYY----RIVSLMKKKRDEREAYLENVMAEMKSQ--LN 230

Query: 366 LMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQIC 425
            + +  +I    K  YSIY+ ++  +   NE+  +  +R+            L    + C
Sbjct: 231 EVEIDADIYGRPKHIYSIYRKMVLQKKQFNEIYDLLAIRV------------LVDSIKDC 278

Query: 426 YHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLI 485
           Y VLG+VH +W P+P   KDYIA PK N YQSLHTT+I    +    LEVQIRT+EM  I
Sbjct: 279 YAVLGIVHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVIGPYGDP---LEVQIRTKEMHKI 335

Query: 486 AERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVG 545
           AE GIAAH++ +                  GK V     N+  +++W   I E+Q E   
Sbjct: 336 AEYGIAAHWAYK-----------------EGKNVDHQKQNVDQKLTWFREILEFQNE--- 375

Query: 546 NMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNG 605
           +  + EF++++  DL    V+VFTP G++  LP G+  +D+AY +H+E+GN+ + AK+NG
Sbjct: 376 SSNAEEFMESLKFDLFSDMVYVFTPEGDVIELPAGSVPIDFAYRVHSEVGNRTIGAKING 435

Query: 606 NLVSPTHVLANAEVVEIITYNVSF 629
            +V     L   +++EI+T   SF
Sbjct: 436 KMVPLDTPLKTGDIIEILTSKQSF 459


>gi|417989775|ref|ZP_12630276.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
           A2-362]
 gi|417993039|ref|ZP_12633390.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
           CRF28]
 gi|417996397|ref|ZP_12636677.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
           M36]
 gi|418015214|ref|ZP_12654791.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
           Lpc-37]
 gi|410532448|gb|EKQ07156.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
           CRF28]
 gi|410535519|gb|EKQ10140.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
           M36]
 gi|410537520|gb|EKQ12094.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
           A2-362]
 gi|410552038|gb|EKQ26077.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
           Lpc-37]
          Length = 742

 Score =  340 bits (873), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 194/486 (39%), Positives = 282/486 (58%), Gaps = 49/486 (10%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           +Y++P  L  V +A   A   H  Q R+SGEP+IIHP++VA IL EL++D  ++A+G LH
Sbjct: 18  AYMNPEHLAFVEKAYKFAAYVHKDQVRKSGEPYIIHPIQVAGILAELKMDPATVASGYLH 77

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDTN+ T   IEE FG  V  IV+G TK+SK+  +  K+E        A++ R+M L
Sbjct: 78  DVVEDTNI-TLGDIEEVFGHDVAVIVDGVTKLSKVTYVAHKDE-------LAENHRKMLL 129

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM +++RVI+VKLADRLHNMRTL H+ P KQ  IA ETL+++APLA  LG+  IK ELE+
Sbjct: 130 AMAKDLRVIMVKLADRLHNMRTLQHLRPDKQRRIANETLEIYAPLADRLGISTIKWELED 189

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
           LS  Y N + Y ++   +     E E  ++EA   + K + D      + +K EI    K
Sbjct: 190 LSLRYLNPQQYYRIAHLMNSKRTEREAYIQEAIDEIEKALTD------LHIKYEIYGRPK 243

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIYK +       +E+  +  +R+I                + CY VLG +H  W P
Sbjct: 244 HIYSIYKKMRDKHKQFDELYDLLAIRVI------------TETIKDCYAVLGAIHTKWKP 291

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PK N YQS+HTT+I  + +    LEVQIRTEEM  +AE G+AAH++ + 
Sbjct: 292 MPGRFKDYIAMPKANLYQSIHTTVIGPMGKP---LEVQIRTEEMHHVAEYGVAAHWAYK- 347

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                            G+T  +       ++     I E Q+E      + +F++++  
Sbjct: 348 ----------------EGQTSKVEYDKTGKKLDIFREILELQDE---TSDAADFMESVKG 388

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           D+   RV+VFTP+G++  LPKG+  +D+ Y++HTE+GN  V AKVNG +V   +VL N +
Sbjct: 389 DIFTDRVYVFTPKGDVYELPKGSNPLDFGYLVHTEVGNHTVGAKVNGKIVPLNYVLKNGD 448

Query: 619 VVEIIT 624
           +VE++T
Sbjct: 449 IVEMLT 454


>gi|423078898|ref|ZP_17067574.1| GTP diphosphokinase, partial [Lactobacillus rhamnosus ATCC 21052]
 gi|357548801|gb|EHJ30660.1| GTP diphosphokinase, partial [Lactobacillus rhamnosus ATCC 21052]
          Length = 760

 Score =  340 bits (873), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 194/486 (39%), Positives = 284/486 (58%), Gaps = 49/486 (10%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           +Y++P  L  V +A   A   H  Q R+SGEP+IIHP++VA IL EL++D E++A+G LH
Sbjct: 37  AYMNPEHLAFVEKAYKFAAYVHKDQVRKSGEPYIIHPIQVAGILAELKMDPETVASGYLH 96

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VED N+ T   IEE FG  V  IV+G TK+SK+  +  K+E        A++ R+M L
Sbjct: 97  DVVEDKNI-TLGDIEEVFGHDVAVIVDGVTKLSKVTYVAHKDE-------LAENHRKMLL 148

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM +++RVI+VKLADRLHNMRTL H+ P KQ  IA ETL+++APLA  LG+  IK ELE+
Sbjct: 149 AMAKDLRVIMVKLADRLHNMRTLQHLRPDKQRRIANETLEIYAPLADRLGISTIKWELED 208

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
           LS  Y N + Y ++   +     E E  ++EA + + K + D      + +K EI    K
Sbjct: 209 LSLRYLNPQQYYRIAHLMNSKRTEREAYIQEAIEEIKKALAD------LHIKYEIYGRPK 262

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIYK +       +E+  +  +R+I                + CY VLG +H  W P
Sbjct: 263 HIYSIYKKMRDKHKQFDELYDLLAIRVI------------TETIKDCYAVLGAIHTKWKP 310

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PK N YQS+HTT+I  + +    LEVQIRTEEM  +AE G+AAH++ + 
Sbjct: 311 MPGRFKDYIAMPKANLYQSIHTTVIGPMGKP---LEVQIRTEEMHHVAEYGVAAHWAYK- 366

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                            G+T  +       ++     I E ++E   +  + +F++++  
Sbjct: 367 ----------------EGQTSKVQYDKAGKKLDIFREILELEDE---SSDAADFMESVKG 407

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           D+   RV+VFTP+G++  LPKG+  +D+ Y+IHTE+GN  V AKVNG +V   +VL N +
Sbjct: 408 DIFTDRVYVFTPKGDVYELPKGSNPLDFGYLIHTEVGNHTVGAKVNGKIVPLNYVLKNGD 467

Query: 619 VVEIIT 624
           +VE++T
Sbjct: 468 IVEMLT 473


>gi|118444430|ref|YP_877917.1| GTP pyrophosphokinase [Clostridium novyi NT]
 gi|118134886|gb|ABK61930.1| GTP pyrophosphokinase [Clostridium novyi NT]
          Length = 729

 Score =  340 bits (873), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 195/483 (40%), Positives = 289/483 (59%), Gaps = 61/483 (12%)

Query: 147 ELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNV 206
           +++ +A   A +AH  QKR SGEP+IIHPVEVA IL E+ LD  +IAA LLHD +EDT+ 
Sbjct: 19  DIIIKAYNYAKDAHKAQKRISGEPYIIHPVEVACILAEMGLDENTIAASLLHDVIEDTDY 78

Query: 207 VTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRV 266
            T+E +E+EF   V  +VEG   V+KLGK+K K +    ++ +++++R+M LAMT+++RV
Sbjct: 79  -TYEDVEKEFNREVANLVEG---VTKLGKIKFKTK----EEQQSENVRKMLLAMTKDIRV 130

Query: 267 IIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNA 326
           I++KLADRLHNMRTL +M   KQ   A ETL ++APLA  LG+ ++K ELE+L+  Y N 
Sbjct: 131 ILIKLADRLHNMRTLKYMTVEKQKEKAKETLDIYAPLAHRLGISKVKWELEDLALRYLNP 190

Query: 327 EDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKA 386
            +Y  + R+VA+  KE E+ +E     L +K      LD   +K+EI    K  YSIY+ 
Sbjct: 191 NEYYDLVRKVAEKRKEREEYIERIIHELKEK------LDEAGIKSEIEGRPKHFYSIYRK 244

Query: 387 VLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDY 446
           ++    +I+++  +  +RI            L    + CY VLG+VH ++ PIP   KDY
Sbjct: 245 MVVKNKTIDQIFDLTAVRI------------LVEDVKDCYAVLGMVHTMYKPIPGRFKDY 292

Query: 447 IATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVT 501
           IA PKPN YQSLH+T+I     PF        E+QIRT EM   +E GIAAH+       
Sbjct: 293 IAMPKPNMYQSLHSTVIGPQGKPF--------EIQIRTYEMHYTSEYGIAAHWK------ 338

Query: 502 GLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLL 561
                 +  G++        ++++   +++WL  + EWQ E        EF++    D+ 
Sbjct: 339 -----YKEGGKN--------SDSDFEAKLAWLREVLEWQRE---TSNPEEFMEDFKIDMF 382

Query: 562 GSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVE 621
              VFVFTP+G++ NLP  +T +D+AY IHT+IG++ +  KVNG +V   + L   E+VE
Sbjct: 383 SDEVFVFTPKGDVINLPSDSTPIDFAYRIHTDIGHRCIGGKVNGRIVPLDYHLKTGEIVE 442

Query: 622 IIT 624
           ++T
Sbjct: 443 VLT 445


>gi|191638527|ref|YP_001987693.1| GTP pyrophosphokinase [Lactobacillus casei BL23]
 gi|385820236|ref|YP_005856623.1| GTP pyrophosphokinase [Lactobacillus casei LC2W]
 gi|385823433|ref|YP_005859775.1| GTP pyrophosphokinase [Lactobacillus casei BD-II]
 gi|418005247|ref|ZP_12645243.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
           UW1]
 gi|190712829|emb|CAQ66835.1| GTP pyrophosphokinase [Lactobacillus casei BL23]
 gi|327382563|gb|AEA54039.1| GTP pyrophosphokinase [Lactobacillus casei LC2W]
 gi|327385760|gb|AEA57234.1| GTP pyrophosphokinase [Lactobacillus casei BD-II]
 gi|410547500|gb|EKQ21733.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
           UW1]
          Length = 742

 Score =  340 bits (873), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 194/486 (39%), Positives = 282/486 (58%), Gaps = 49/486 (10%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           +Y++P  L  V +A   A   H  Q R+SGEP+IIHP++VA IL EL++D  ++A+G LH
Sbjct: 18  AYMNPEHLAFVEKAYKFAAYVHKDQVRKSGEPYIIHPIQVAGILAELKMDPATVASGYLH 77

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDTN+ T   IEE FG  V  IV+G TK+SK+  +  K+E        A++ R+M L
Sbjct: 78  DVVEDTNI-TLGDIEEVFGHDVAVIVDGVTKLSKVTYVAHKDE-------LAENHRKMLL 129

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM +++RVI+VKLADRLHNMRTL H+ P KQ  IA ETL+++APLA  LG+  IK ELE+
Sbjct: 130 AMAKDLRVIMVKLADRLHNMRTLQHLRPDKQRRIANETLEIYAPLADRLGISTIKWELED 189

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
           LS  Y N + Y ++   +     E E  ++EA   + K + D      + +K EI    K
Sbjct: 190 LSLRYLNPQQYYRIAHLMNSKRTEREAYIQEAIDEIEKALAD------LHIKYEIYGRPK 243

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIYK +       +E+  +  +R+I                + CY VLG +H  W P
Sbjct: 244 HIYSIYKKMRDKHKQFDELYDLLAIRVI------------TETIKDCYAVLGAIHTKWKP 291

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PK N YQS+HTT+I  + +    LEVQIRTEEM  +AE G+AAH++ + 
Sbjct: 292 MPGRFKDYIAMPKANLYQSIHTTVIGPMGKP---LEVQIRTEEMHHVAEYGVAAHWAYK- 347

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                            G+T  +       ++     I E Q+E      + +F++++  
Sbjct: 348 ----------------EGQTSKVEYDKTGKKLDIFREILELQDE---TSDAADFMESVKG 388

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           D+   RV+VFTP+G++  LPKG+  +D+ Y++HTE+GN  V AKVNG +V   +VL N +
Sbjct: 389 DIFTDRVYVFTPKGDVYELPKGSNPLDFGYLVHTEVGNHTVGAKVNGKIVPLNYVLKNGD 448

Query: 619 VVEIIT 624
           +VE++T
Sbjct: 449 IVEMLT 454


>gi|116495022|ref|YP_806756.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
           [Lactobacillus casei ATCC 334]
 gi|116105172|gb|ABJ70314.1| Guanosine polyphosphate pyrophosphohydrolase/synthetase
           [Lactobacillus casei ATCC 334]
          Length = 742

 Score =  340 bits (872), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 194/486 (39%), Positives = 282/486 (58%), Gaps = 49/486 (10%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           +Y++P  L  V +A   A   H  Q R+SGEP+IIHP++VA IL EL++D  ++A+G LH
Sbjct: 18  AYMNPEHLAFVEKAYKFAAYVHKDQVRKSGEPYIIHPIQVAGILAELKMDPATVASGYLH 77

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDTN+ T   IEE FG  V  IV+G TK+SK+  +  K+E        A++ R+M L
Sbjct: 78  DVVEDTNI-TLGDIEEVFGHDVAVIVDGVTKLSKVTYVAHKDE-------LAENHRKMLL 129

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM +++RVI+VKLADRLHNMRTL H+ P KQ  IA ETL+++APLA  LG+  IK ELE+
Sbjct: 130 AMAKDLRVIMVKLADRLHNMRTLQHLRPDKQRRIANETLEIYAPLADRLGISTIKWELED 189

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
           LS  Y N + Y ++   +     E E  ++EA   + K + D      + +K EI    K
Sbjct: 190 LSLRYLNPQQYYRIAHLMNSKRTEREAYIQEAIDEIEKALAD------LHIKYEIYGRPK 243

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIYK +       +E+  +  +R+I                + CY VLG +H  W P
Sbjct: 244 HIYSIYKKMRDKHKQFDELYDLLAIRVI------------TETIKDCYAVLGAIHTKWKP 291

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PK N YQS+HTT+I  + +    LEVQIRTEEM  +AE G+AAH++ + 
Sbjct: 292 MPGRFKDYIAMPKANLYQSIHTTVIGPMGKP---LEVQIRTEEMHHVAEYGVAAHWAYK- 347

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                            G+T  +       ++     I E Q+E      + +F++++  
Sbjct: 348 ----------------EGQTSKVEYDKTGKKLDIFREILELQDE---TSDAADFMESVKG 388

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           D+   RV+VFTP+G++  LPKG+  +D+ Y++HTE+GN  V AKVNG +V   +VL N +
Sbjct: 389 DIFTDRVYVFTPKGDVYELPKGSNPLDFGYLVHTEVGNHTVGAKVNGKIVPLNYVLKNGD 448

Query: 619 VVEIIT 624
           +VE++T
Sbjct: 449 IVEMLT 454


>gi|421836333|ref|ZP_16270846.1| GTP pyrophosphokinase, partial [Clostridium botulinum CFSAN001627]
 gi|409741806|gb|EKN41461.1| GTP pyrophosphokinase, partial [Clostridium botulinum CFSAN001627]
          Length = 465

 Score =  340 bits (872), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 201/501 (40%), Positives = 289/501 (57%), Gaps = 63/501 (12%)

Query: 130 LWEDLRPTISY-LSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
           + EDL   I Y  +  E+E +++A   A  AH  QKR SGEP+I HP EVA IL E+ +D
Sbjct: 1   MLEDLMIKIKYSFTEKEIEFIKKAYNFACNAHKEQKRISGEPYITHPEEVAIILFEMGMD 60

Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
             ++ AGL+HD VEDT   T+E + +EFG  V  +V G   V+KLGK++ K +    ++ 
Sbjct: 61  VNTMIAGLMHDVVEDTQY-TYEDVAKEFGNEVADLVNG---VTKLGKIEYKTK----EEQ 112

Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
           +AD++R+M LAMT+++RVI++KLADRLHNMRTL  MP  KQ   A ETL ++APLA  LG
Sbjct: 113 QADNVRKMLLAMTKDIRVILIKLADRLHNMRTLRFMPVEKQKEKAQETLDIYAPLAHRLG 172

Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
           + +IK ELE+LSF Y N  +Y  + R++A+   E E+ ++E    L       Q L    
Sbjct: 173 ISKIKWELEDLSFRYINPNEYYFLVRKIAEKRAEREEHIKEIISNLQ------QNLKRSG 226

Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
           +++EI    K  YSIYK +     +++++  +  +RI            L    + CY  
Sbjct: 227 IESEIDGRPKHFYSIYKKMHNKNKNLDQIFDLTAVRI------------LVDTVKDCYAA 274

Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMD 483
           LG+ H ++ PIP   KDYIA PKPN YQSLH+T++     PF        E+QIRT EM 
Sbjct: 275 LGIAHTVYKPIPGRFKDYIAMPKPNMYQSLHSTVMGVGGRPF--------EIQIRTYEMH 326

Query: 484 LIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEF 543
             AE GIAAH+                    + K    N+ NI L+++WL  + +WQ+E 
Sbjct: 327 KTAEYGIAAHW--------------------KYKEDVENSNNIDLKLTWLREMLDWQKE- 365

Query: 544 VGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKV 603
                  EF+     DL    VFVFTP+G++ +LP  AT VD+AY IHT+IG++ + AKV
Sbjct: 366 --TTDPEEFMQGFKIDLFSDEVFVFTPKGKVISLPNKATPVDFAYKIHTDIGHRCIGAKV 423

Query: 604 NGNLVSPTHVLANAEVVEIIT 624
           NG +V   + L   E++E++T
Sbjct: 424 NGKMVPLDYELKTGEIIEVLT 444


>gi|163814889|ref|ZP_02206277.1| hypothetical protein COPEUT_01040 [Coprococcus eutactus ATCC 27759]
 gi|158449828|gb|EDP26823.1| RelA/SpoT family protein [Coprococcus eutactus ATCC 27759]
          Length = 814

 Score =  340 bits (872), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 204/505 (40%), Positives = 292/505 (57%), Gaps = 60/505 (11%)

Query: 127 PERLWEDLRPTI-SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGEL 185
           PE L+++L   I +Y    ++ ++ +A  +A  AH GQ R+SGEP+I+HP+ VA IL EL
Sbjct: 82  PEDLYKELITRILTYHPSADITMIEKAYKVADAAHKGQLRKSGEPYIMHPLNVAIILAEL 141

Query: 186 ELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSV 245
           ELD E+I AG+LHD VEDT V+T E I  EF   V  +V+G   V+KL +LK   +   V
Sbjct: 142 ELDKETIVAGILHDVVEDT-VMTSEEIASEFSEEVAFLVDG---VTKLTQLKMTTDKIEV 197

Query: 246 QDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAK 305
           Q   A++LR+MFL+M +++RVI++KLADRLHN+RTL +  P KQ   A ET+ ++AP+A 
Sbjct: 198 Q---AENLRKMFLSMAKDIRVILIKLADRLHNLRTLQYQSPEKQIEKARETMDIYAPIAH 254

Query: 306 LLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIED-DQFL 364
            LG+ +IK EL++LS MY   E Y  +K ++       +++L E +  + + +ED  + +
Sbjct: 255 RLGISKIKVELDDLSMMYLMPEVYNDLKAQI-------DEKLTERDAYIKRVVEDVKKHI 307

Query: 365 DLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
           D   ++ EI    K  +SIYK +     +++++  I  +RI +            +  + 
Sbjct: 308 DNAGLEAEIDGRVKHFFSIYKKMKNQNKTLDQIYDIFAVRIKV------------NTVRD 355

Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRT 479
           CY  LG++H ++ PIP   KDYIA PK N YQSLHTTLI     PF        E+QIRT
Sbjct: 356 CYSALGIIHEMYKPIPGRFKDYIAMPKSNMYQSLHTTLIGPEGQPF--------EIQIRT 407

Query: 480 EEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREW 539
            EM   AE GIAAH+  +  +TG V                        ++SWL  I EW
Sbjct: 408 YEMHRTAEYGIAAHWKYKENITGTVMQKEEE------------------KLSWLRQILEW 449

Query: 540 QEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMV 599
           Q +   N     FV T   DL   +V+ FTP G++KNLP G+T +D+AY IHT +GNKMV
Sbjct: 450 QRDTDDNKEFMSFVKT-DLDLFAEQVYCFTPAGDVKNLPSGSTPIDFAYAIHTAVGNKMV 508

Query: 600 AAKVNGNLVSPTHVLANAEVVEIIT 624
            A++NG  V     L N + VEIIT
Sbjct: 509 GARINGRQVPIDTKLNNGDRVEIIT 533


>gi|403515171|ref|YP_006655991.1| PpGpp synthetase [Lactobacillus helveticus R0052]
 gi|403080609|gb|AFR22187.1| PpGpp synthetase [Lactobacillus helveticus R0052]
          Length = 746

 Score =  340 bits (872), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 197/485 (40%), Positives = 284/485 (58%), Gaps = 49/485 (10%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++ +++  V +A   A +AH GQKR SG+P+IIHP +VA  L  L LD ++IAAG LHD
Sbjct: 19  YMNDDQVAFVEKAYEFANKAHAGQKRASGQPYIIHPTQVAGTLATLGLDPDTIAAGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
           TVEDT  VT + ++E+FG  V  IV+G TK++K        E  S Q+  A++ R+M +A
Sbjct: 79  TVEDT-PVTNDELKEKFGEDVAFIVDGVTKLNKY-------EYKSHQEFLAENHRKMLIA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M +++RVI+VKLADRLHNM TL H+ P KQ  IA+ET+ ++APLA  LG+  IK ELE++
Sbjct: 131 MAKDLRVIMVKLADRLHNMHTLQHLRPDKQRRIASETMDIYAPLADRLGIGTIKWELEDM 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           SF Y N E Y ++   +     + EK + +  K L K       LD + +K EI    K 
Sbjct: 191 SFHYLNPEAYYRIVNLMDVKRSQREKYIADTIKTLKKT------LDELGIKYEIYGRPKH 244

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIYK ++      +E+  +  +R+I+K              + CY VLG VH  W P+
Sbjct: 245 IYSIYKKMVNKHKDFDEIYDLLAVRVIVK------------NVRDCYAVLGAVHTEWKPM 292

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK NGYQSLHTT+I         LE+QIRTE+M  +AE G+AAH++ +  
Sbjct: 293 PGRFKDYIAMPKVNGYQSLHTTIIG---PGGRPLEIQIRTEQMHEVAEYGVAAHWAYK-- 347

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
                          RG    +  ++   ++  +  I E ++E      + EF+ ++  D
Sbjct: 348 ---------------RGNFTGVQESSSGEKLDMVREILELKDE---TKDAGEFMKSVKSD 389

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           +   RV+VFTP+GE+  LPKG+  +D+AY IHT++GN  V AKVN  LV   + L N +V
Sbjct: 390 IFSDRVYVFTPKGEVYELPKGSVTLDFAYAIHTQVGNHAVGAKVNNKLVPLDYKLRNGDV 449

Query: 620 VEIIT 624
           +EI+T
Sbjct: 450 IEIMT 454


>gi|148381010|ref|YP_001255551.1| GTP pyrophosphokinase [Clostridium botulinum A str. ATCC 3502]
 gi|153931540|ref|YP_001385381.1| GTP pyrophosphokinase [Clostridium botulinum A str. ATCC 19397]
 gi|153936238|ref|YP_001388788.1| GTP pyrophosphokinase [Clostridium botulinum A str. Hall]
 gi|226950488|ref|YP_002805579.1| GTP pyrophosphokinase [Clostridium botulinum A2 str. Kyoto]
 gi|387819316|ref|YP_005679663.1| GTP pyrophosphokinase [Clostridium botulinum H04402 065]
 gi|148290494|emb|CAL84622.1| GTP pyrophosphokinase [Clostridium botulinum A str. ATCC 3502]
 gi|152927584|gb|ABS33084.1| putative GTP diphosphokinase/guanosine-3',5'-bis(diphosphate)
           3'-pyrophosphohydrolase [Clostridium botulinum A str.
           ATCC 19397]
 gi|152932152|gb|ABS37651.1| putative GTP diphosphokinase/guanosine-3',5'-bis(diphosphate)
           3'-pyrophosphohydrolase [Clostridium botulinum A str.
           Hall]
 gi|226842731|gb|ACO85397.1| GTP pyrophosphokinase [Clostridium botulinum A2 str. Kyoto]
 gi|322807360|emb|CBZ04934.1| GTP pyrophosphokinase [Clostridium botulinum H04402 065]
          Length = 723

 Score =  340 bits (872), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 201/501 (40%), Positives = 289/501 (57%), Gaps = 63/501 (12%)

Query: 130 LWEDLRPTISY-LSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
           + EDL   I Y  +  E+E +++A   A  AH  QKR SGEP+I HP EVA IL E+ +D
Sbjct: 1   MLEDLMIKIKYSFTEKEIEFIKKAYNFACNAHKEQKRISGEPYITHPEEVAIILFEMGMD 60

Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
             ++ AGL+HD VEDT   T+E + +EFG  V  +V G   V+KLGK++ K +    ++ 
Sbjct: 61  VNTMIAGLMHDVVEDTQY-TYEDVAKEFGNEVADLVNG---VTKLGKIEYKTK----EEQ 112

Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
           +AD++R+M LAMT+++RVI++KLADRLHNMRTL  MP  KQ   A ETL ++APLA  LG
Sbjct: 113 QADNVRKMLLAMTKDIRVILIKLADRLHNMRTLRFMPVEKQKEKAQETLDIYAPLAHRLG 172

Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
           + +IK ELE+LSF Y N  +Y  + R++A+   E E+ ++E    L       Q L    
Sbjct: 173 ISKIKWELEDLSFRYINPNEYYFLVRKIAEKRAEREEHIKEIISNLQ------QNLKRSG 226

Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
           +++EI    K  YSIYK +     +++++  +  +RI            L    + CY  
Sbjct: 227 IESEIDGRPKHFYSIYKKMHNKNKNLDQIFDLTAVRI------------LVDTVKDCYAA 274

Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMD 483
           LG+ H ++ PIP   KDYIA PKPN YQSLH+T++     PF        E+QIRT EM 
Sbjct: 275 LGIAHTVYKPIPGRFKDYIAMPKPNMYQSLHSTVMGVGGRPF--------EIQIRTYEMH 326

Query: 484 LIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEF 543
             AE GIAAH+                    + K    N+ NI L+++WL  + +WQ+E 
Sbjct: 327 KTAEYGIAAHW--------------------KYKEGVENSNNIDLKLTWLREMLDWQKE- 365

Query: 544 VGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKV 603
                  EF+     DL    VFVFTP+G++ +LP  AT VD+AY IHT+IG++ + AKV
Sbjct: 366 --TTDPEEFMQGFKIDLFSDEVFVFTPKGKVISLPNKATPVDFAYKIHTDIGHRCIGAKV 423

Query: 604 NGNLVSPTHVLANAEVVEIIT 624
           NG +V   + L   E++E++T
Sbjct: 424 NGKMVPLDYELKTGEIIEVLT 444


>gi|168181749|ref|ZP_02616413.1| GTP diphosphokinase [Clostridium botulinum Bf]
 gi|237796515|ref|YP_002864067.1| GTP pyrophosphokinase [Clostridium botulinum Ba4 str. 657]
 gi|182675126|gb|EDT87087.1| GTP diphosphokinase [Clostridium botulinum Bf]
 gi|229261873|gb|ACQ52906.1| RelA/SpoT family protein [Clostridium botulinum Ba4 str. 657]
          Length = 723

 Score =  340 bits (872), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 201/501 (40%), Positives = 289/501 (57%), Gaps = 63/501 (12%)

Query: 130 LWEDLRPTISY-LSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
           + EDL   I Y  +  E+E +++A   A  AH  QKR SGEP+I HP EVA IL E+ +D
Sbjct: 1   MLEDLMIKIKYSFTEREIEFIKKAYNFACNAHKEQKRISGEPYITHPEEVAIILFEMGMD 60

Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
             ++ AGL+HD VEDT   T+E + +EFG  V  +V G   V+KLGK++ K +    ++ 
Sbjct: 61  VNTMIAGLMHDVVEDTQY-TYEDVAKEFGNEVADLVNG---VTKLGKIEYKTK----EEQ 112

Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
           +AD++R+M LAMT+++RVI++KLADRLHNMRTL  MP  KQ   A ETL ++APLA  LG
Sbjct: 113 QADNVRKMLLAMTKDIRVILIKLADRLHNMRTLRFMPVEKQKEKAQETLDIYAPLAHRLG 172

Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
           + +IK ELE+LSF Y N  +Y  + R++A+   E E+ ++E    L       Q L    
Sbjct: 173 ISKIKWELEDLSFRYINPNEYYFLVRKIAEKRAEREEHIKEIISNLQ------QNLKRAG 226

Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
           +++EI    K  YSIYK +     +++++  +  +RI            L    + CY  
Sbjct: 227 IESEIDGRPKHFYSIYKKMHNKNKNLDQIFDLTAVRI------------LVDTVKDCYAA 274

Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMD 483
           LG+ H ++ PIP   KDYIA PKPN YQSLH+T++     PF        E+QIRT EM 
Sbjct: 275 LGIAHTVYKPIPGRFKDYIAMPKPNMYQSLHSTVMGVGGRPF--------EIQIRTYEMH 326

Query: 484 LIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEF 543
             AE GIAAH+                    + K    N+ NI L+++WL  + +WQ+E 
Sbjct: 327 KTAEYGIAAHW--------------------KYKEGVENSNNIDLKLTWLREMLDWQKE- 365

Query: 544 VGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKV 603
                  EF+     DL    VFVFTP+G++ +LP  AT VD+AY IHT+IG++ + AKV
Sbjct: 366 --TTDPEEFMQGFKIDLFSDEVFVFTPKGKVISLPNRATPVDFAYKIHTDIGHRCIGAKV 423

Query: 604 NGNLVSPTHVLANAEVVEIIT 624
           NG +V   + L   E++E++T
Sbjct: 424 NGKMVPLDYELKTGEIIEVLT 444


>gi|158335664|ref|YP_001516836.1| ppGpp 3'-pyrophosphohydrolase [Acaryochloris marina MBIC11017]
 gi|158305905|gb|ABW27522.1| ppGpp 3'-pyrophosphohydrolase [Acaryochloris marina MBIC11017]
          Length = 753

 Score =  340 bits (872), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 200/482 (41%), Positives = 281/482 (58%), Gaps = 46/482 (9%)

Query: 145 ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDT 204
           E  L+ RA    ++ H+GQ+R SGEP+I HPV VA +L +L      IAAG LHD VEDT
Sbjct: 36  EQTLICRAFNFGYQLHEGQRRASGEPYIAHPVSVAELLRDLGGSAAMIAAGFLHDVVEDT 95

Query: 205 NVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEV 264
           +V T E IE EFG  VR++VEG TK+SK      K E       +A++ R+MFLAM +++
Sbjct: 96  DV-TPETIEAEFGLEVRQLVEGVTKLSKFN-FSTKTER------EAENFRRMFLAMAQDI 147

Query: 265 RVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYT 324
           RVI+VKLADRLHNMRTL H+PP KQ  IA ET  VFAPLA  LG+++ K ELE+L+F Y 
Sbjct: 148 RVIVVKLADRLHNMRTLEHLPPVKQRRIAQETRDVFAPLANRLGIWRFKWELEDLAFKYL 207

Query: 325 NAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIY 384
             + Y ++++ VAD   + E  +E+A  IL  ++E      + +   EI    K  +SI 
Sbjct: 208 EPDTYRRMQQLVADKRTDREDHIEQAITILHDRLE-----PICSKHLEISGRPKHLFSIS 262

Query: 385 KAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMK 444
           + + + +   +E+  +A +R+I+K              + CY  L +VH  + PIP   K
Sbjct: 263 QKMERQQKEFHEIYDVAAVRVIVKTN------------EECYRALAVVHDCFRPIPGRFK 310

Query: 445 DYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLV 504
           DYI  PK N YQSLHT +I         LEVQIRTE M  IAE GIAAH+          
Sbjct: 311 DYIGLPKSNRYQSLHTVVIGLGGRP---LEVQIRTEAMHHIAEYGIAAHWK--------- 358

Query: 505 GHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSR 564
              + +   P GK     +     + +WL  + EWQ +      ++E++D +  +L  S 
Sbjct: 359 --YKESSNQP-GKAAWSPDDE---KFTWLRQLLEWQSDL---KDAQEYLDNVKDNLFDSE 409

Query: 565 VFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
           V+VFTP+G++ +L +GAT VD+AY IHTE+GN    A+VNG +V+    L N ++VEI+T
Sbjct: 410 VYVFTPKGDLIDLTQGATPVDFAYRIHTEVGNHCFGARVNGRMVTLDTPLDNGDIVEIMT 469

Query: 625 YN 626
            N
Sbjct: 470 QN 471


>gi|320105665|ref|YP_004181255.1| (p)ppGpp synthetase I SpoT/RelA [Terriglobus saanensis SP1PR4]
 gi|319924186|gb|ADV81261.1| (p)ppGpp synthetase I, SpoT/RelA [Terriglobus saanensis SP1PR4]
          Length = 822

 Score =  340 bits (872), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 201/498 (40%), Positives = 287/498 (57%), Gaps = 53/498 (10%)

Query: 128 ERLWEDLRPTISYLSP-NELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELE 186
           +R +E L  T+    P ++L ++R A     E H GQKR SGEP+IIHP+EV ++L E++
Sbjct: 87  DRNFEKLLLTVHEARPSDDLGIIRDAWKFCVEQHVGQKRASGEPYIIHPLEVGQVLAEMK 146

Query: 187 LDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQ 246
           +D  +IAAGLLHD VEDT+V T E I   FG  V  IVEG   V+KL ++K  N+    +
Sbjct: 147 MDSTAIAAGLLHDAVEDTDVSTPE-IARRFGEQVAHIVEG---VTKLDRIKFANK----E 198

Query: 247 DVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKL 306
           D +A+++R+M LAM  ++RV+++KLADRLHNMRTL H+ P KQ  IA ETL ++APLA  
Sbjct: 199 DHQAENIRKMLLAMVTDIRVVLIKLADRLHNMRTLQHLKPEKQMKIARETLDIYAPLAHR 258

Query: 307 LGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDL 366
           LGM +++ E E+L+F Y +   Y +V   VA L  E EK L      +  K+ +      
Sbjct: 259 LGMGKLRGEFEDLAFRYVDPVAYEQVSEEVAKLRVEGEKFLSGIVATIEAKLTEHG---- 314

Query: 367 MTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICY 426
           +  + E R   K  YSI + +      +++V  +  +R+I +              Q CY
Sbjct: 315 IPARVEWR--IKRLYSIQQKLAAQAIPVDQVYDLLAIRVITQ------------TMQDCY 360

Query: 427 HVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIA 486
             LGL+H IW P+P  +KD+IA P+PN YQSLHTTL+    E   + EVQIRT+EM  IA
Sbjct: 361 ATLGLLHSIWRPVPGRIKDFIAMPRPNLYQSLHTTLVA---EGGHQFEVQIRTDEMHRIA 417

Query: 487 ERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGN 546
           E GIAAH+  +                   +TV   +     R++W+  + EWQ E    
Sbjct: 418 EEGIAAHWKYKA-----------------DETVSAKDEQ---RLAWVRQLMEWQREMT-- 455

Query: 547 MTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGN 606
               EF+ T+  DL    V+ FTP+G++  LPK A+ +D+AY IHTE+G+  + AKVNG 
Sbjct: 456 -DPNEFMSTLKIDLYPEEVYTFTPKGKVVVLPKDASPIDFAYTIHTEVGHTTIGAKVNGR 514

Query: 607 LVSPTHVLANAEVVEIIT 624
           +V     L N ++VEI T
Sbjct: 515 IVPLRTRLRNGDIVEITT 532


>gi|428221859|ref|YP_007106029.1| RelA/SpoT family (p)ppGpp synthetase [Synechococcus sp. PCC 7502]
 gi|427995199|gb|AFY73894.1| (p)ppGpp synthetase, RelA/SpoT family [Synechococcus sp. PCC 7502]
          Length = 752

 Score =  340 bits (872), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 199/480 (41%), Positives = 283/480 (58%), Gaps = 44/480 (9%)

Query: 147 ELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNV 206
           ++V +A  LA++ H GQ R SGEP+I+HP++VA +L +L      IAAG LHD VEDT+V
Sbjct: 46  DIVCQAFKLAYKLHQGQTRASGEPYILHPIQVANLLRDLGGGSAMIAAGFLHDVVEDTSV 105

Query: 207 VTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRV 266
            T   IE +FGA VR++VEG TK+SK+     K E       +A++ R+MFL M E++RV
Sbjct: 106 -TLAEIEAQFGAEVRQLVEGVTKLSKIN-FNSKTER------QAENFRRMFLYMAEDIRV 157

Query: 267 IIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNA 326
           I+VKLADRLHNMRTL H+ PHKQ  IA ET  +FAPLA  LG+ Q K ELE+L+F Y  A
Sbjct: 158 IVVKLADRLHNMRTLEHLAPHKQVLIARETRDIFAPLANRLGIGQFKWELEDLAFKYLEA 217

Query: 327 EDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKA 386
           E Y ++K  VA+   + E  + EA +IL  +I+      +     E+    K  Y IY+ 
Sbjct: 218 EQYREMKALVAETRSDREARITEAVEILRSRIQ-----KIGITGFEVTGRPKHLYGIYEK 272

Query: 387 VLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDY 446
           + + +    E+  IA +R+I+            +    CY +L + H  + P+P   KDY
Sbjct: 273 MHRQQKPYGEIYDIAAVRVIV------------NNTDECYRILAIAHDCFRPVPGRFKDY 320

Query: 447 IATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGH 506
           IA PKPNGYQSLHT +I    +    LEVQIRT EM  +AE GIAAH+  +        +
Sbjct: 321 IALPKPNGYQSLHTAVISPDGQP---LEVQIRTWEMHHVAEYGIAAHWKYK------ESN 371

Query: 507 ARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSRVF 566
           + PN          LNN N + + +WL  + E Q++   +   +E+++++ +DL    +F
Sbjct: 372 SNPNSNG------GLNN-NDSEKFNWLRQMVESQKDIKDD---QEYIESLKQDLFNDEIF 421

Query: 567 VFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITYN 626
           VFTP+G++  LP+G+T VD+AY IHTE+GN    A VN  +VS    L N + V I+  N
Sbjct: 422 VFTPKGDVHCLPRGSTPVDFAYRIHTEVGNHCAGALVNQRMVSLDRKLQNGDTVTILRQN 481


>gi|404413602|ref|YP_006699189.1| GTP pyrophosphokinase [Listeria monocytogenes SLCC7179]
 gi|404239301|emb|CBY60702.1| GTP pyrophosphokinase [Listeria monocytogenes SLCC7179]
          Length = 738

 Score =  340 bits (872), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 194/490 (39%), Positives = 292/490 (59%), Gaps = 50/490 (10%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++   L LV+ A   A ++H  Q R+SGEP+IIHP++VA IL EL++D  ++A+G LHD
Sbjct: 19  YMNQEHLALVKNAYEFARDSHKEQFRKSGEPYIIHPIQVAGILVELKMDPSTVASGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            VEDT  VT   +EE FG+ V  +V+G   V+KLGK+K K    S ++ +A++ R+MF+A
Sbjct: 79  VVEDT-PVTLADLEEVFGSEVAMLVDG---VTKLGKIKYK----SHEEQQAENHRKMFIA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M +++RVI++KLADRLHNMRTL H+P  KQ  IA ETL++FAPLA  LG+ ++K ELE+ 
Sbjct: 131 MAQDIRVILIKLADRLHNMRTLKHLPVEKQRRIANETLEIFAPLAHRLGISRVKWELEDT 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           +  Y N + Y     R+  L K+     E     ++  + ++  LD + ++ +I    K 
Sbjct: 191 ALRYLNPQQYY----RIVHLMKQKRDARERYLHDVIDGVNEN--LDELNIQADISGRPKH 244

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIY+ + +     NE+  +  +RI++            S  + CY VLG++H  W P+
Sbjct: 245 IYSIYRKMSEQNKQFNEIYDLLAVRIVV------------SSIKDCYAVLGIIHTRWKPM 292

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK N YQS+HTT+I    E    LEVQIRT EM  IAE G+AAH+     
Sbjct: 293 PGRFKDYIAMPKSNMYQSIHTTVIGPQGEP---LEVQIRTHEMHQIAEYGVAAHW----- 344

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
                  A   G+    KT   N      +++W   I E+Q E   +  + EF++++  D
Sbjct: 345 -------AYKEGKVVNSKTSFDN------KLTWFREILEYQNE---SDNAEEFMESLKLD 388

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           L    V+VFTP+G++  LP G+  +D+AY +HTEIGNK + AK+NG +V+  + L   ++
Sbjct: 389 LFSDVVYVFTPKGDVYELPNGSVPLDFAYRVHTEIGNKTIGAKINGKIVTLDYKLKTGDI 448

Query: 620 VEIITYNVSF 629
           ++I+T   S+
Sbjct: 449 IDILTSKHSY 458


>gi|347548906|ref|YP_004855234.1| putative (p)ppGpp synthetase [Listeria ivanovii subsp. ivanovii PAM
           55]
 gi|346981977|emb|CBW85962.1| Putative (p)ppGpp synthetase [Listeria ivanovii subsp. ivanovii PAM
           55]
          Length = 738

 Score =  340 bits (872), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 193/490 (39%), Positives = 293/490 (59%), Gaps = 50/490 (10%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++   L LV++A   A ++H  Q R+SGEP+IIHP++VA IL EL++D  ++A+G LHD
Sbjct: 19  YMNQEHLALVKKAYEFARDSHKEQFRKSGEPYIIHPIQVAGILVELKMDPSTVASGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            VEDT  VT   +EE FG+ V  +V+G   V+KLGK+K K    S ++ +A++ R+MF+A
Sbjct: 79  VVEDT-PVTLADLEEVFGSEVAMLVDG---VTKLGKIKYK----SHEEQQAENHRKMFIA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M +++RVI++KLADRLHNMRTL H+P  KQ  I+ ETL++FAPLA  LG+ ++K ELE+ 
Sbjct: 131 MAQDIRVILIKLADRLHNMRTLKHLPVEKQRRISNETLEIFAPLAHRLGISRVKWELEDT 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           +  Y N + Y     R+  L K+     E     ++  + ++  LD + ++ +I    K 
Sbjct: 191 ALRYLNPQQYY----RIVHLMKQKRDARERYLNDVIDGVNEN--LDELNIQADISGRPKH 244

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIY+ + +     NE+  +  +RI++            S  + CY VLG++H  W P+
Sbjct: 245 IYSIYRKMSEQNKQFNEIYDLLAVRIVV------------SSIKDCYAVLGIIHTRWKPM 292

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK N YQS+HTT+I    E    LEVQIRT EM  IAE G+AAH+     
Sbjct: 293 PGRFKDYIAMPKSNMYQSIHTTVIGPQGEP---LEVQIRTHEMHQIAEYGVAAHW----- 344

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
                  A   G+    KT   N      +++W   I E+Q E   +  + EF++++  D
Sbjct: 345 -------AYKEGKVVNSKTSFDN------KLTWFREILEYQNE---SDNAEEFMESLKLD 388

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           L    V+VFTP+G++  LP G+  +D+AY +HTEIGNK + AK+NG +V+  + L   ++
Sbjct: 389 LFSDVVYVFTPKGDVYELPNGSVPLDFAYRVHTEIGNKTIGAKINGKIVTLDYKLKTGDI 448

Query: 620 VEIITYNVSF 629
           ++I+T   S+
Sbjct: 449 IDILTSKHSY 458


>gi|347532608|ref|YP_004839371.1| (p)ppGpp synthetase I SpoT/RelA [Roseburia hominis A2-183]
 gi|345502756|gb|AEN97439.1| (p)ppGpp synthetase I, SpoT/RelA [Roseburia hominis A2-183]
          Length = 788

 Score =  340 bits (872), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 206/525 (39%), Positives = 297/525 (56%), Gaps = 79/525 (15%)

Query: 125 DSPERLWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILG 183
           +SPE L+ +L  ++    P+ ++ L+ +A  +A +AH+GQ R+SGEP+I+HP+ VA IL 
Sbjct: 34  ESPEDLYHELIASVRKYHPSADISLIEKAYHVARDAHEGQTRKSGEPYIVHPLCVAIILA 93

Query: 184 ELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENH 243
           ELELD E+IAAGLLHD +EDT V+T + I+EEF   V  +V+G TK+  L  L   + NH
Sbjct: 94  ELELDKETIAAGLLHDVLEDT-VMTADEIKEEFSEEVLLLVDGVTKLRHL-HLTDNSHNH 151

Query: 244 SVQD-------VKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATET 296
             +D       ++A++LR+MFLAM +++RVI++KLADRLHNMRTL +     Q  IA ET
Sbjct: 152 DQKDRSAERLEMQAENLRKMFLAMAKDIRVILIKLADRLHNMRTLKYQSKEAQIRIARET 211

Query: 297 LQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMK 356
            +++ P+A+ LG+ +IK EL++LS  Y   E Y  + R++                   K
Sbjct: 212 QEIYCPIAQRLGISKIKIELDDLSLKYLEPEAYYDLVRQIDQ----------------RK 255

Query: 357 KIEDDQFLDLMT----------VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRII 406
            + DD    L+           +  EI    K  +SIYK ++    +++++  +  +RII
Sbjct: 256 SVRDDYVQSLVEEVRAHIKAAGIVAEIEGRAKHFFSIYKKMVNQDKTLDQIYDLFAIRII 315

Query: 407 IKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI--- 463
           +               + CY  LG++H ++ PIP   KDYIA PKPN YQSLHTTLI   
Sbjct: 316 V------------DSVKDCYAALGVIHEMYKPIPGRFKDYIAMPKPNMYQSLHTTLIGPT 363

Query: 464 --PFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCL 521
             PF        E+QIRT EM   AE GIAAH+  +         A  NG +    TV  
Sbjct: 364 GQPF--------EIQIRTYEMHRTAEYGIAAHWKYK--------EASNNGGAAVPMTVTE 407

Query: 522 NNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPK 579
                  ++SWL  I EWQ +   N   +EF+  +    DL    VF FTP G++KNLP 
Sbjct: 408 EE-----KLSWLRQILEWQRDMSDN---KEFMSLLKSDLDLFSDTVFCFTPTGDVKNLPN 459

Query: 580 GATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
           G+T +D+AY IH+ +GNKM+ AK NG LV   +V+ N + +EIIT
Sbjct: 460 GSTPIDFAYSIHSAVGNKMIGAKANGKLVPIDYVIQNGDRIEIIT 504


>gi|433463434|ref|ZP_20420988.1| GTP pyrophosphokinase [Halobacillus sp. BAB-2008]
 gi|432187529|gb|ELK44809.1| GTP pyrophosphokinase [Halobacillus sp. BAB-2008]
          Length = 734

 Score =  340 bits (871), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 193/486 (39%), Positives = 286/486 (58%), Gaps = 50/486 (10%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
            YL+ ++L  +RRA   A +AH  Q R+SGEP+IIHP++VA IL  LE+D E++A G LH
Sbjct: 18  QYLNESDLAFIRRAYEFAEKAHSNQFRKSGEPYIIHPIQVAGILVNLEMDPETVAGGFLH 77

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT++ T E I + F   V  +V+G   V+KLGK+K K    S +  +A++ R+MF+
Sbjct: 78  DVVEDTDI-TLEEIGDAFNTEVAMLVDG---VTKLGKIKYK----SKEAQQAENHRKMFV 129

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM +++RVI++KLADRLHNMRTL H+P  KQ  I+ ETL++FAPLA  LG+  IK ELE+
Sbjct: 130 AMAKDIRVILIKLADRLHNMRTLKHLPAEKQRRISNETLEIFAPLAHRLGISTIKWELED 189

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
            +  Y N + Y     R+  L K+   E E   + ++ +I+    LD + ++ ++    K
Sbjct: 190 TALRYLNPQQYY----RIVHLMKQKRNEREHYIEEVINEIQTQ--LDDVNIQADLNGRPK 243

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIY+ ++      NE+  +  +RI ++              + CY VLG++H  W P
Sbjct: 244 HLYSIYRKMVLQNKQFNEIYDLLAVRITVESI------------KDCYAVLGIIHTCWKP 291

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PKPN YQSLHTT+I    +    LEVQIRT +M  IAE GIAAH++ + 
Sbjct: 292 MPGRFKDYIAMPKPNLYQSLHTTVIGPKGDP---LEVQIRTHDMHEIAEYGIAAHWAYK- 347

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                            GK      +    +++W   I EWQ E      + EF++++  
Sbjct: 348 ----------------EGKQSAAEQS-FEEKLTWFREILEWQNE---THDAEEFMESLKV 387

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           DL    V+VFTP+G++  LP G+  VD+AY IHTE+GN+ + AKVNG +    + L   +
Sbjct: 388 DLFSDMVYVFTPKGDVIELPSGSVPVDFAYRIHTEVGNQTIGAKVNGKMEPLDYELKTGD 447

Query: 619 VVEIIT 624
           +V+++T
Sbjct: 448 IVDVMT 453


>gi|134298601|ref|YP_001112097.1| (p)ppGpp synthetase I SpoT/RelA [Desulfotomaculum reducens MI-1]
 gi|134051301|gb|ABO49272.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfotomaculum reducens MI-1]
          Length = 721

 Score =  340 bits (871), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 195/499 (39%), Positives = 293/499 (58%), Gaps = 52/499 (10%)

Query: 130 LWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDW 189
           L+E  +  + Y    ++  +R+A   A  AH GQKR SGE +I+HP+ +A IL EL+LD 
Sbjct: 4   LFELEQKVLLYNPSVDIAFLRKAYNFAENAHRGQKRISGEDYIVHPLAIAIILAELQLDV 63

Query: 190 ESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVK 249
           +++AAGLLHD VEDT + T E IE+ F   +  +V+G   V+KLGKL+ + +    ++ +
Sbjct: 64  QTVAAGLLHDVVEDTGI-TLEDIEKNFSLEIATMVDG---VTKLGKLQFQTK----EERQ 115

Query: 250 ADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGM 309
           A++LR+MFLAM +++RVI++KLADRLHN+RTL      KQ  +A ETL  F P+A  LG+
Sbjct: 116 AENLRKMFLAMAKDIRVILIKLADRLHNLRTLQFQSERKQKEVAEETLHFFTPMAHRLGI 175

Query: 310 YQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTV 369
           Y+IK ELE+LSF Y   E Y ++K ++A    + E+ ++E  K L  K      L  + +
Sbjct: 176 YKIKWELEDLSFRYLEPEQYQRMKVQIAKSRAKREEYIQEVIKELAAK------LSAVNI 229

Query: 370 KTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVL 429
           K+EI+   K  YSIY+ +++ +  + ++  +  +R+            L +  + CY  L
Sbjct: 230 KSEIQGRPKNLYSIYQKMVEQQKELKDIFDVQAVRV------------LVNSVKDCYGSL 277

Query: 430 GLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERG 489
           G+ H +W PIP   KDYIA PK N YQSLHTT+I    E    +E+QIRT +M  +AE G
Sbjct: 278 GIAHTLWKPIPGRFKDYIAMPKSNMYQSLHTTVIGPHGEP---VEIQIRTWDMHKVAEYG 334

Query: 490 IAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTS 549
           IAAH+                    R K       +   +++W+  + + Q E      +
Sbjct: 335 IAAHW--------------------RYKEGSQEEKDFDKKLAWIRQMLDAQHE---ARDA 371

Query: 550 REFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVS 609
           +EF++ +  DL    VFVFTP+G++  LP GA  +D+AY IHT++G++ V AKVNG +V 
Sbjct: 372 KEFMENLKVDLFSQSVFVFTPKGDVMELPAGAVPLDFAYRIHTDVGHRTVGAKVNGRIVP 431

Query: 610 PTHVLANAEVVEIITYNVS 628
             HVL N  ++EIIT  VS
Sbjct: 432 LDHVLKNGNIIEIITSKVS 450


>gi|357636371|ref|ZP_09134246.1| RelA/SpoT family protein [Streptococcus macacae NCTC 11558]
 gi|357584825|gb|EHJ52028.1| RelA/SpoT family protein [Streptococcus macacae NCTC 11558]
          Length = 740

 Score =  340 bits (871), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 193/485 (39%), Positives = 293/485 (60%), Gaps = 49/485 (10%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++ +++  V +AL  A + H GQ R+SGEP+IIHP++VA IL +L LD  +++ G LHD
Sbjct: 19  YMNASDVAFVEKALDYAQQCHSGQLRKSGEPYIIHPIQVAGILADLHLDAITVSCGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            VEDT   T + +EE+FG  VR IV+G   V+KLGK++ K    S Q+  A++ R+M +A
Sbjct: 79  VVEDTEA-TLDDLEEKFGTDVRNIVDG---VTKLGKVEYK----SHQEQLAENHRKMLMA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M+ ++RVI+VKLADRLHNMRTL H+   KQ  I+ ET++++APLA  LG+ +IK ELE+L
Sbjct: 131 MSRDIRVILVKLADRLHNMRTLRHLRKDKQERISRETMEIYAPLAHRLGISRIKWELEDL 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           +F Y N  ++ K+ R    L KE  +E E     ++KKI+  ++ +  ++  EI    K 
Sbjct: 191 AFRYLNEVEFYKISR----LMKEKRREREALVDEIVKKIK--EYTEEQSLYGEIYGRPKH 244

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIY+ +   +   +++  +  +R I           L +P  + Y +LG +H +W P+
Sbjct: 245 IYSIYRKMRDKKKRFDQIYDLIAIRCI-----------LDTPSDV-YAMLGYIHELWRPM 292

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK NGYQS+HTT    +Y     +EVQIRT+EM  +AE G+AAH++ +  
Sbjct: 293 PGRFKDYIANPKANGYQSIHTT----VYGPKGPIEVQIRTKEMHQVAEYGVAAHWAYKKG 348

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
           + G V                 +N   AL ++W+  + E Q+    N  + +FVD++  D
Sbjct: 349 IKGKV-----------------DNKESALGMNWIQELIELQD--ASNGDAIDFVDSVKED 389

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           +   R++VFTP G ++ LP+ +  +D+AY IHT++G K   AKVNG +V  T  L   +V
Sbjct: 390 IFSERIYVFTPNGAVQELPRESGPIDFAYAIHTQVGEKATGAKVNGRMVPLTAKLKTGDV 449

Query: 620 VEIIT 624
           VEIIT
Sbjct: 450 VEIIT 454


>gi|383787986|ref|YP_005472554.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
           3'-pyrophosphohydrolase [Caldisericum exile AZM16c01]
 gi|381363622|dbj|BAL80451.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
           3'-pyrophosphohydrolase [Caldisericum exile AZM16c01]
          Length = 682

 Score =  340 bits (871), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 200/500 (40%), Positives = 291/500 (58%), Gaps = 53/500 (10%)

Query: 126 SPERLWEDLRPTIS-YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
           + E L+E+L+  +S YL    ++L+  A   A E H GQ R SGE +IIHP+ VA IL  
Sbjct: 2   TKESLFEELKNKVSPYLDGEGMKLLEDAYKFALEKHSGQTRESGEEYIIHPLNVAIILAN 61

Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
           L+LD E+ AA LLHD +EDTNV T E I+ +FG TV  +V G TK+  +  +       S
Sbjct: 62  LKLDAETYAAALLHDVIEDTNV-TLEDIKSQFGETVAFLVNGVTKLRGIKSV-------S 113

Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
            ++   + LR+M LAM ++VRV+++KLADRLHNMRTL+++P  +Q  IA ET+ ++ PLA
Sbjct: 114 TEEAHLESLRKMLLAMAQDVRVVLIKLADRLHNMRTLNYLPSERQKEIAKETMDIYVPLA 173

Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
             LG+Y +K ELE+LSF Y   E Y ++ R+VA   +E E  + E    LM+++ +   L
Sbjct: 174 HRLGIYTMKWELEDLSFRYLEPEKYYELARKVAKKREEREAYVNE----LMEELRN--LL 227

Query: 365 DLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
               +   +    K  Y IY+ +++      E+  I  LRII+   P             
Sbjct: 228 KEHGISGIVEGRPKNLYGIYRKMIRDGKQFEEIYDIIALRIIVDDIPT------------ 275

Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDL 484
           CY VLG+V+  +  +P  +KDYIA PKPN Y+SLHTT+I    +S    E+QIRT EM  
Sbjct: 276 CYQVLGIVNNYYKLVPGRIKDYIAMPKPNFYRSLHTTVIT---KSGEPFEIQIRTREMHE 332

Query: 485 IAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFV 544
           I E GIAAH+                 +   GK++   + N   +I+WL  + EWQ+E  
Sbjct: 333 IDEMGIAAHW-----------------KYKEGKSL---DKNYEAKIAWLRQMLEWQKEV- 371

Query: 545 GNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVN 604
              +S+EFV+ +  DL    V VFTP+G++  LP+G+T VD+A+ +HT+IG + + AKVN
Sbjct: 372 --RSSKEFVERVKVDLFSDEVLVFTPKGDVIELPQGSTPVDFAFRVHTDIGYRCIGAKVN 429

Query: 605 GNLVSPTHVLANAEVVEIIT 624
           G+LV   + L   + VEIIT
Sbjct: 430 GSLVPLNYKLQTGDRVEIIT 449


>gi|414154562|ref|ZP_11410880.1| GTP pyrophosphokinase [Desulfotomaculum hydrothermale Lam5 = DSM
           18033]
 gi|411453959|emb|CCO08784.1| GTP pyrophosphokinase [Desulfotomaculum hydrothermale Lam5 = DSM
           18033]
          Length = 723

 Score =  340 bits (871), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 196/499 (39%), Positives = 292/499 (58%), Gaps = 52/499 (10%)

Query: 130 LWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDW 189
           L+E  +  + Y    ++  +R+A   A  AH GQKR SGE +I+HP+ ++ IL EL+LD 
Sbjct: 4   LFELEQKVLLYNPAADIAFLRKAYNFAEHAHRGQKRISGEDYIVHPLAISIILAELQLDV 63

Query: 190 ESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVK 249
           +++AAGLLHD VEDT + T   IE  FGA V  +V+G   V+KLGKL+ + +    ++ +
Sbjct: 64  QTVAAGLLHDVVEDTGI-TLADIENNFGAEVANMVDG---VTKLGKLQYQTK----EERQ 115

Query: 250 ADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGM 309
           A++LR+MFLAM +++RVI++KLADRLHN+RTL      KQ  +A ETL  FAP+A  LG+
Sbjct: 116 AENLRKMFLAMAKDIRVILIKLADRLHNLRTLQFQSERKQKEVAEETLHFFAPMAHRLGI 175

Query: 310 YQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTV 369
           Y+IK ELE+LSF Y   E Y ++K ++A    + E+ ++   K L +K      L  + +
Sbjct: 176 YKIKWELEDLSFRYLEPEQYQRMKAQIAKSRAKREEYIQGVIKELAEK------LAAVNI 229

Query: 370 KTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVL 429
           K EI+   K  YSIY+ +++ +  + ++  +  +R+            L +  + CY  L
Sbjct: 230 KAEIQGRPKNLYSIYQKMIEQQKELKDIFDVQAVRV------------LVNSVKDCYGAL 277

Query: 430 GLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERG 489
           G+ H +W PIP   KDYIA PK N YQSLHTT+I    E    +E+QIRT EM  +AE G
Sbjct: 278 GIAHTLWKPIPGRFKDYIAMPKSNMYQSLHTTVIGPNGEP---VEIQIRTWEMHRVAEYG 334

Query: 490 IAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTS 549
           IAAH+                    R K       +   +++W+  + + Q E      +
Sbjct: 335 IAAHW--------------------RYKEGAQGEKDFDKKLAWIRQMLDAQHE---ARDA 371

Query: 550 REFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVS 609
           REF++ +  DL    VFVFTP+G++  LP GA  +D+AY IHT++G++ V AKVNG +V 
Sbjct: 372 REFMENLKIDLFSQSVFVFTPKGDVMELPAGAVPLDFAYRIHTDVGHRTVGAKVNGRIVP 431

Query: 610 PTHVLANAEVVEIITYNVS 628
             + L N ++VEIIT   S
Sbjct: 432 LDYKLKNGDIVEIITSKAS 450


>gi|16800626|ref|NP_470894.1| hypothetical protein lin1558 [Listeria innocua Clip11262]
 gi|422413014|ref|ZP_16489973.1| GTP diphosphokinase [Listeria innocua FSL S4-378]
 gi|16414045|emb|CAC96789.1| relA [Listeria innocua Clip11262]
 gi|313618809|gb|EFR90701.1| GTP diphosphokinase [Listeria innocua FSL S4-378]
          Length = 738

 Score =  340 bits (871), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 194/490 (39%), Positives = 292/490 (59%), Gaps = 50/490 (10%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++   L LV++A   A ++H  Q R+SGEP+IIHP++VA IL EL++D  ++A+G LHD
Sbjct: 19  YMNQEHLALVKKAYEFARDSHKEQFRKSGEPYIIHPIQVAGILVELKMDPSTVASGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            VEDT  VT   +EE FG  V  +V+G   V+KLGK+K K    S ++ +A++ R+MF+A
Sbjct: 79  VVEDT-PVTLADLEEVFGEEVAMLVDG---VTKLGKIKYK----SHEEQQAENHRKMFIA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M +++RVI++KLADRLHNMRTL H+P  KQ  IA ETL++FAPLA  LG+ ++K ELE+ 
Sbjct: 131 MAQDIRVILIKLADRLHNMRTLKHLPVEKQRRIANETLEIFAPLAHRLGISRVKWELEDT 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           +  Y N + Y     R+  L K+     E     ++  + ++  LD + ++ +I    K 
Sbjct: 191 ALRYLNPQQYY----RIVHLMKQKRDARERYLHDVIDGVNEN--LDELNIQADISGRPKH 244

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIY+ + +     NE+  +  +RI++            S  + CY VLG++H  W P+
Sbjct: 245 IYSIYRKMSEQNKQFNEIYDLLAVRIVV------------SSIKDCYAVLGIIHTRWKPM 292

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK N YQS+HTT+I    E    LEVQIRT EM  IAE G+AAH+     
Sbjct: 293 PGRFKDYIAMPKSNMYQSIHTTVIGPQGEP---LEVQIRTHEMHQIAEYGVAAHW----- 344

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
                  A   G+    KT   N      +++W   I E+Q E   +  + EF++++  D
Sbjct: 345 -------AYKEGKVVNSKTSFDN------KLTWFREILEYQNE---SDNAEEFMESLKLD 388

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           L    V+VFTP+G++  LP G+  +D+AY +HTEIGNK + AK+NG +V+  + L   ++
Sbjct: 389 LFSDVVYVFTPKGDVYELPNGSVPLDFAYRVHTEIGNKTIGAKINGKIVTLDYKLKTGDI 448

Query: 620 VEIITYNVSF 629
           ++I+T   S+
Sbjct: 449 IDILTSKHSY 458


>gi|226323920|ref|ZP_03799438.1| hypothetical protein COPCOM_01697 [Coprococcus comes ATCC 27758]
 gi|225207469|gb|EEG89823.1| RelA/SpoT family protein [Coprococcus comes ATCC 27758]
          Length = 774

 Score =  340 bits (871), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 197/504 (39%), Positives = 299/504 (59%), Gaps = 54/504 (10%)

Query: 126 SPERLWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
           +PE L++ L   +    P+ ++ ++ +A  +A +AH GQ R+SGE +IIHP+ V  IL +
Sbjct: 36  NPELLYKSLIERVRKYHPSADVSMIEKAYHIARDAHKGQTRKSGEEYIIHPLWVGIILAQ 95

Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
           LE+D E+I AG+LHD VEDT V+T E I +EFG  V  +V+G   V+KLG+L    +   
Sbjct: 96  LEMDKETIVAGILHDVVEDT-VMTDEEIRQEFGDEVALLVDG---VTKLGQLSYSADKLE 151

Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
           VQ   A++LR+MFLAM +++RVII+KLADRLHNMRTL +M P KQ   A ET+ ++AP+A
Sbjct: 152 VQ---AENLRKMFLAMAKDIRVIIIKLADRLHNMRTLQYMRPEKQLEKAKETMDIYAPIA 208

Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDD--Q 362
           + LG+ +IK+EL++L+  Y+  E +  + +++     E E+         +++I D+   
Sbjct: 209 QRLGISKIKTELDDLALKYSQPEVFNDLVKQINARKTEREE--------FVQQIVDEVST 260

Query: 363 FLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQ 422
            +    +  E+    K  +SIYK ++    +++++  +  +RII+               
Sbjct: 261 HMKNANIDAEVNGRVKHFFSIYKKMVNQDKTVDQIYDLFAVRIIV------------DSV 308

Query: 423 QICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEM 482
           + CY  LG++H ++TP+P   KDYIA PK N YQSLHTTL+  + +     E+QIRT+EM
Sbjct: 309 KDCYAALGVIHEMYTPVPGRFKDYIAMPKANMYQSLHTTLMSSIGQP---FEIQIRTKEM 365

Query: 483 DLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEE 542
              AE GIAAH+  +               S  GK      A    ++SWL  I EWQ +
Sbjct: 366 HKTAEYGIAAHWKYK--------------ESEDGKKSV--EAKEEEKLSWLRQILEWQRD 409

Query: 543 FVGNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVA 600
              N   REF++ +    DL    V+ FTP G++KNLP G+T VD+AY IHT +GNKMV 
Sbjct: 410 MSDN---REFLNLLKGDLDLFAEDVYCFTPNGDVKNLPNGSTPVDFAYAIHTAVGNKMVG 466

Query: 601 AKVNGNLVSPTHVLANAEVVEIIT 624
           A+VNG LV+  + + N + +EI+T
Sbjct: 467 ARVNGKLVNIDYKIQNGDRIEILT 490


>gi|239624473|ref|ZP_04667504.1| (p)ppGpp synthetase I [Clostridiales bacterium 1_7_47_FAA]
 gi|239520859|gb|EEQ60725.1| (p)ppGpp synthetase I [Clostridiales bacterium 1_7_47FAA]
          Length = 765

 Score =  340 bits (871), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 201/509 (39%), Positives = 299/509 (58%), Gaps = 65/509 (12%)

Query: 126 SPERLWEDLRPTISYLSP-NELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
           SPE L++DL  TI    P +++ ++ +A  +A EAH  QKR+SGEP+IIHP+ VA +L +
Sbjct: 26  SPEELYQDLINTIRKYHPSDDITMIEKAYRIANEAHKEQKRKSGEPYIIHPLCVAIVLAD 85

Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
           LE+D E+IAAGLLHD VEDT ++T +++ +EFG+ V  +V+G TK+++L   K K E   
Sbjct: 86  LEMDKETIAAGLLHDVVEDT-IMTLDQLTKEFGSEVSFLVDGVTKLTQLNWDKDKVE--- 141

Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
              ++AD+LR+MFLAM +++RVII+KLADRLHNMRT  +  P KQ   A ET++++AP+A
Sbjct: 142 ---IQADNLRKMFLAMAKDIRVIIIKLADRLHNMRTGQYWKPEKQKEKARETMEIYAPIA 198

Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDD--Q 362
             LG+ +IK EL++LS  +   + Y  +  +V DL K       +A +  +++I D+   
Sbjct: 199 DRLGISKIKIELDDLSLKFLKPDVYYDLVEKV-DLRK-------DAREAFVQEIVDEVKN 250

Query: 363 FLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQ 422
            +    V   +    K  +SIYK ++    +++++  +  +RI++               
Sbjct: 251 HMKEAGVDATVGGRVKHFFSIYKKMVNQNKTLDQIYDLFAVRIMV------------DNV 298

Query: 423 QICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQI 477
           + CY  LG++H ++ PIP   KDYIA PK N YQSLHTTLI     PF        E+QI
Sbjct: 299 KDCYAALGVIHEMYKPIPGRFKDYIAMPKQNMYQSLHTTLIGSNGQPF--------EIQI 350

Query: 478 RTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIR 537
           RT EM   AE GIAAH+  +   +G V                        ++SWL  I 
Sbjct: 351 RTYEMHRTAEYGIAAHWKYKESGSGQVAAGSEEA-----------------KLSWLRQIL 393

Query: 538 EWQEEFVGNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIG 595
           EWQ +      S+EF+  +    DL    V+ FTP G++K LP G+T +D+AY IH+ +G
Sbjct: 394 EWQRD---TDDSKEFLSMVKGDLDLFSDSVYCFTPSGDVKTLPSGSTPIDFAYCIHSAVG 450

Query: 596 NKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
           NKMV A+VNG LV   +V+ N + +EIIT
Sbjct: 451 NKMVGARVNGKLVPIEYVIQNGDQLEIIT 479


>gi|160878706|ref|YP_001557674.1| (p)ppGpp synthetase I SpoT/RelA [Clostridium phytofermentans ISDg]
 gi|160427372|gb|ABX40935.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium phytofermentans ISDg]
          Length = 813

 Score =  340 bits (871), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 201/507 (39%), Positives = 293/507 (57%), Gaps = 61/507 (12%)

Query: 126 SPERLWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
           SP+ L+E L  TI    P+ ++E+V +A  +A  AH  Q R+SGEP+IIHP+ VA IL E
Sbjct: 76  SPDELYEILLKTIRAYHPSTDVEIVEKAYKIATFAHKDQLRKSGEPYIIHPLCVAIILAE 135

Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
           LELD E+I AG+LHD VEDT V+T   + +EFG  V  +V+G TK+++L   K K E   
Sbjct: 136 LELDKETIVAGILHDVVEDT-VLTVSELTKEFGEEVALLVDGVTKLTQLNYSKDKVE--- 191

Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
              ++A++LR+MFLAM +++RVI++KLADRLHNMRT+ +  P KQ   + ET+ ++AP+A
Sbjct: 192 ---IQAENLRKMFLAMAKDIRVILIKLADRLHNMRTMQYQTPKKQIEKSRETMDIYAPIA 248

Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
           + LG+  IK EL++LS  Y   E Y ++  ++A   +E E  +    + + K I +    
Sbjct: 249 QRLGISMIKIELDDLSLQYLEPEVYKELNEKIASKKEEREAFINSIVEDVGKHIAE---- 304

Query: 365 DLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
               +  +I    K  +SIYK ++    ++ ++  +  +RI++               + 
Sbjct: 305 --ANISAKIDGRVKHFFSIYKKMVNQGKTLEQIYDLFAVRIVV------------DTVKD 350

Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRT 479
           CY  LG++H ++ PIP   KDYIA PKPN YQSLHTTLI     PF        E+QIRT
Sbjct: 351 CYAALGVIHEMYKPIPGRFKDYIAMPKPNMYQSLHTTLIGPNGQPF--------EIQIRT 402

Query: 480 EEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREW 539
            EM   AE GIAAH+  +       GH   N R                +++WL  I EW
Sbjct: 403 FEMHRTAEYGIAAHWKYK------EGHDGKNTRDTE-----------EAKLTWLRQILEW 445

Query: 540 QEEFVGNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNK 597
           Q +   N   +EF+  +    DL    V+ FTP G++KNLP G+  VD+AY IH+ +GNK
Sbjct: 446 QRDLSDN---KEFLSLLKNDLDLFSDSVYCFTPTGDVKNLPAGSNPVDFAYSIHSAVGNK 502

Query: 598 MVAAKVNGNLVSPTHVLANAEVVEIIT 624
           MV A+VNG LV   +V+ N + +EI+T
Sbjct: 503 MVGARVNGRLVPIDYVIQNGDRIEIMT 529


>gi|293571366|ref|ZP_06682397.1| GTP pyrophosphokinase [Enterococcus faecium E980]
 gi|431738631|ref|ZP_19527574.1| RelA/SpoT family protein [Enterococcus faecium E1972]
 gi|291608582|gb|EFF37873.1| GTP pyrophosphokinase [Enterococcus faecium E980]
 gi|430597359|gb|ELB35162.1| RelA/SpoT family protein [Enterococcus faecium E1972]
          Length = 786

 Score =  340 bits (871), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 195/493 (39%), Positives = 288/493 (58%), Gaps = 51/493 (10%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
            Y+ P  +  V +A   A  AHDGQ R+SGEP+IIHP++VA IL +L++D  ++A G LH
Sbjct: 67  QYMGPEHVAFVEKACEYATAAHDGQFRKSGEPYIIHPIQVAGILADLKMDPHTVATGFLH 126

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT V T E + EEFG  V  +V+G   V+KLGK+K K+    +    A++ R+M L
Sbjct: 127 DVVEDTEV-TLEDLREEFGDDVAMLVDG---VTKLGKIKYKSHEEQL----AENHRKMLL 178

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM +++RVI+VKLADRLHNMRTL H+   KQ  IA ETL+++APLA  LG+ +IK ELE+
Sbjct: 179 AMAQDLRVIMVKLADRLHNMRTLKHLREDKQRRIAQETLEIYAPLAHRLGISRIKWELED 238

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQF-LDLMTVKTEIRSVC 377
            +  Y N + Y ++   +       + + EE  K +   +ED +   + + +  EI    
Sbjct: 239 TALRYLNPKQYYRIVHLM-------QTKREEREKYVNGTVEDIRVATEELGIFAEIYGRP 291

Query: 378 KEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWT 437
           K  YSIY+ +   +   NE+  +  +R+I+               + CY VLG +H  W 
Sbjct: 292 KHIYSIYRKMKDQKKQFNEIYDLLAIRVIV------------DSIKDCYAVLGAIHTKWK 339

Query: 438 PIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGR 497
           P+P   KDYIA PK N YQSLHTT+I     +   +E+QIRT+EM  IAE G+AAH++  
Sbjct: 340 PMPGRFKDYIAMPKANMYQSLHTTVIG---PAGNPVEIQIRTQEMHEIAEFGVAAHWA-- 394

Query: 498 VFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTIT 557
            +  G      P+G              +  ++SW + I E Q+E   +  + EF++ + 
Sbjct: 395 -YKEGKSEKVEPDG--------------MTKQLSWFHEILELQDE---SYDASEFMEGVK 436

Query: 558 RDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANA 617
            D+   +V+VFTP+G++  LPKG+  +D+AY IHT+IGNK   AKVNG +V   + L N 
Sbjct: 437 GDIFSDKVYVFTPKGDVTELPKGSGPLDFAYSIHTDIGNKTTGAKVNGKMVQLDYKLKNG 496

Query: 618 EVVEIITYNVSFS 630
           +++EI+T   SF 
Sbjct: 497 DIIEIMTSPNSFG 509


>gi|422416024|ref|ZP_16492981.1| GTP diphosphokinase [Listeria innocua FSL J1-023]
 gi|423100605|ref|ZP_17088312.1| GTP diphosphokinase [Listeria innocua ATCC 33091]
 gi|313623673|gb|EFR93827.1| GTP diphosphokinase [Listeria innocua FSL J1-023]
 gi|370792829|gb|EHN60672.1| GTP diphosphokinase [Listeria innocua ATCC 33091]
          Length = 738

 Score =  340 bits (871), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 194/490 (39%), Positives = 292/490 (59%), Gaps = 50/490 (10%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++   L LV++A   A ++H  Q R+SGEP+IIHP++VA IL EL++D  ++A+G LHD
Sbjct: 19  YMNQEHLALVKKAYEFARDSHKEQFRKSGEPYIIHPIQVAGILVELKMDPSTVASGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            VEDT  VT   +EE FG  V  +V+G   V+KLGK+K K    S ++ +A++ R+MF+A
Sbjct: 79  VVEDT-PVTLADLEEVFGEEVAMLVDG---VTKLGKIKYK----SHEEQQAENHRKMFIA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M +++RVI++KLADRLHNMRTL H+P  KQ  IA ETL++FAPLA  LG+ ++K ELE+ 
Sbjct: 131 MAQDIRVILIKLADRLHNMRTLKHLPVEKQRRIANETLEIFAPLAHRLGISRVKWELEDT 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           +  Y N + Y     R+  L K+     E     ++  + ++  LD + ++ +I    K 
Sbjct: 191 ALRYLNPQQYY----RIVHLMKQKRDARERYLHDVIDGVNEN--LDELNIQADISGRPKH 244

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIY+ + +     NE+  +  +RI++            S  + CY VLG++H  W P+
Sbjct: 245 IYSIYRKMSEQNKQFNEIYDLLAVRIVV------------SSIKDCYAVLGIIHTRWKPM 292

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK N YQS+HTT+I    E    LEVQIRT EM  IAE G+AAH+     
Sbjct: 293 PGRFKDYIAMPKSNMYQSIHTTVIGPQGEP---LEVQIRTHEMHQIAEYGVAAHW----- 344

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
                  A   G+    KT   N      +++W   I E+Q E   +  + EF++++  D
Sbjct: 345 -------AYKEGKVVNSKTSFDN------KLTWFREILEYQNE---SDNAEEFMESLKLD 388

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           L    V+VFTP+G++  LP G+  +D+AY +HTEIGNK + AK+NG +V+  + L   ++
Sbjct: 389 LFSDVVYVFTPKGDVYELPNGSVPLDFAYRVHTEIGNKTIGAKINGKIVTLDYKLKTGDI 448

Query: 620 VEIITYNVSF 629
           ++I+T   S+
Sbjct: 449 IDILTSKHSY 458


>gi|429762033|ref|ZP_19294440.1| GTP diphosphokinase [Anaerostipes hadrus DSM 3319]
 gi|429182579|gb|EKY23677.1| GTP diphosphokinase [Anaerostipes hadrus DSM 3319]
          Length = 765

 Score =  340 bits (871), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 207/515 (40%), Positives = 297/515 (57%), Gaps = 64/515 (12%)

Query: 118 SSDAFKEDSPERLWEDLRPTI-SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPV 176
           S D+F    PE L   L  T+ S     ++E V RA  +A++AH+ QKR+SGEP+IIHP+
Sbjct: 18  SPDSFT--PPEELKRQLITTMQSIYDEEDIEAVERAYKVAYKAHEKQKRKSGEPYIIHPI 75

Query: 177 EVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKL 236
            VA IL ELELD E+I AGLLHD VEDT   T E I  +FG  V ++V+G TK+ +L   
Sbjct: 76  CVAIILAELELDKETIMAGLLHDVVEDTET-THEDIVRDFGEEVAQLVDGVTKLGQLSYS 134

Query: 237 KCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATET 296
           K K E      V+A++LR+MFLAM +++RVI++KLADRLHNMRT+  M P KQ   + ET
Sbjct: 135 KDKIE------VQAENLRKMFLAMAKDIRVILIKLADRLHNMRTMQFMRPEKQKEKSRET 188

Query: 297 LQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMK 356
           + ++AP+A  LG+ +IK EL++L+  Y   + Y  ++R +    +E E  ++E    ++ 
Sbjct: 189 MDIYAPIAHRLGISKIKVELDDLALRYLKPDVYEDLERSLDSAKEEREAFIQE----IVD 244

Query: 357 KIEDDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVG 416
           +++    +D   +K EI    K  +SIYK ++    +I+++  +  +RI +         
Sbjct: 245 EVKG--HIDRAGIKAEIDGRVKHMFSIYKKMVNQHKTIDQIYDLFAVRIKV--------- 293

Query: 417 PLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMF 471
                 + CY  LG++H ++ PIP   KDYIA PKPN YQSLHTTLI     PF      
Sbjct: 294 ---DTVKDCYAALGIIHEMYKPIPGRFKDYIAMPKPNMYQSLHTTLIGPEGHPF------ 344

Query: 472 RLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRIS 531
             E+QIRT EM  +AE GIAAH+  +                    T  LN      ++S
Sbjct: 345 --EIQIRTFEMHRVAEYGIAAHWKYK----------------ENNNTKGLNKEE--EKLS 384

Query: 532 WLNAIREWQEEFVGNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYM 589
           WL  + EWQ +   N   +EF+  +    DL   +V+ FTP G++KNL  G+T +D+AY 
Sbjct: 385 WLREVLEWQRDMDDN---KEFLSLLKTNLDLFAEQVYCFTPNGDVKNLANGSTPIDFAYS 441

Query: 590 IHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
           IH+ +GNKMV A+VNG  V   + L N + VEIIT
Sbjct: 442 IHSAVGNKMVGARVNGRQVPFDYHLQNGDRVEIIT 476


>gi|418070749|ref|ZP_12708024.1| GTP pyrophosphokinase [Lactobacillus rhamnosus R0011]
 gi|357540169|gb|EHJ24186.1| GTP pyrophosphokinase [Lactobacillus rhamnosus R0011]
          Length = 741

 Score =  340 bits (871), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 194/486 (39%), Positives = 283/486 (58%), Gaps = 49/486 (10%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           +Y++P  L  V +A   A   H  Q R+SGEP+IIHP++VA IL EL++D E++A+G LH
Sbjct: 18  AYMNPEHLAFVEKAYKFAAYVHKDQVRKSGEPYIIHPIQVAGILAELKMDPETVASGYLH 77

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VED N+ T   IEE FG  V  IV+G TK+SK+  +  K+E        A++ R+M L
Sbjct: 78  DVVEDKNI-TLGDIEEVFGHDVAVIVDGVTKLSKVTYVAHKDE-------LAENHRKMLL 129

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM +++RVI+VKLADRLHNMRTL H+ P KQ  IA ETL+++APLA  LG+  IK ELE+
Sbjct: 130 AMAKDLRVIMVKLADRLHNMRTLQHLRPDKQRRIANETLEIYAPLADRLGISTIKWELED 189

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
           LS  Y N + Y ++   +     E E  ++EA + + K + D      + +K EI    K
Sbjct: 190 LSLRYLNPQQYYRIAHLMNSKRTEREAYIQEAIEEIKKALAD------LHIKYEIYGRPK 243

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIYK +       +E+  +  +R+I                + CY VLG +H  W P
Sbjct: 244 HIYSIYKKMRDKHKQFDELYDLLAIRVI------------TETIKDCYAVLGAIHTKWKP 291

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PK N YQS+HTT+I  + +    LEVQIRTEEM  +AE G+AAH++ + 
Sbjct: 292 MPGRFKDYIAMPKANLYQSIHTTVIGPMGKP---LEVQIRTEEMHHVAEYGVAAHWAYK- 347

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                            G+T  +       ++     I E Q+E   +  + +F++++  
Sbjct: 348 ----------------EGQTSKVQYDKAGKKLDIFREILELQDE---SSDAADFMESVKG 388

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           D+   RV+VFTP+G++  LPKG+  +D+ Y+IHTE+ N  V AKVNG +V   +VL N +
Sbjct: 389 DIFTDRVYVFTPKGDVYELPKGSNPLDFGYLIHTEVANHTVGAKVNGKIVPLNYVLKNGD 448

Query: 619 VVEIIT 624
           +VE++T
Sbjct: 449 IVEMLT 454


>gi|251780257|ref|ZP_04823177.1| putative GTP diphosphokinase/guanosine-3',5'-bis(diphosphate)
           3'-pyrophosphohydrolase [Clostridium botulinum E1 str.
           'BoNT E Beluga']
 gi|243084572|gb|EES50462.1| RelA/SpoT family protein [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
          Length = 728

 Score =  340 bits (871), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 198/480 (41%), Positives = 283/480 (58%), Gaps = 48/480 (10%)

Query: 145 ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDT 204
           ++E++++A   A +AH  QKR SGEP+IIHP++VA IL EL +D  +IAAGLLHD +EDT
Sbjct: 17  DVEMIKKAYYFAEDAHKEQKRESGEPYIIHPIDVAEILAELGMDTSTIAAGLLHDVIEDT 76

Query: 205 NVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEV 264
              ++E ++  F   +  +V G   V+KLGK++ K +    ++ +AD++R+M LAM +++
Sbjct: 77  -TCSYESMKTIFNEEIANLVNG---VTKLGKIQYKTK----EEQQADNVRKMLLAMAKDI 128

Query: 265 RVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYT 324
           RVII+KLADRLHNMRTL  M   KQ   A ETL ++APLA  LGM +IK ELE+LSF Y 
Sbjct: 129 RVIIIKLADRLHNMRTLKFMTKGKQKLKAKETLDIYAPLAHRLGMSKIKWELEDLSFRYL 188

Query: 325 NAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIY 384
           + ++Y ++  ++A+   E E  + E    L +K      LD   + ++I    K  YSIY
Sbjct: 189 HEDEYYQLVEQIAEKRVERETYINEVVCYLKEK------LDESGIDSDIEGRPKHFYSIY 242

Query: 385 KAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMK 444
           K ++    SI ++  +  +RI            L +  + CY VLG+VH I+ PIP   K
Sbjct: 243 KKMINKNKSIEQIFDLTAIRI------------LVNSVKDCYGVLGIVHTIYKPIPGRFK 290

Query: 445 DYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLV 504
           DYIA PKPN YQSLHTT+I    ++    E+QIRT EM   AE GIAAH+          
Sbjct: 291 DYIAMPKPNMYQSLHTTVIGNQGKT---FEIQIRTFEMHKTAEYGIAAHWK--------- 338

Query: 505 GHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSR 564
              +   ++   K       +   ++ WL  + EWQ+E      + EF++    DL    
Sbjct: 339 --YKEGDKNEEDKA-----KDFEKKLVWLRDMLEWQKE---TSDAEEFIEGFKIDLFSDE 388

Query: 565 VFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
           VFVFTP+G + NL   AT +D+AY IHT+IGNK V AKVNG +V   + L   E+VEI+T
Sbjct: 389 VFVFTPKGVVINLCAKATPIDFAYRIHTDIGNKCVGAKVNGRIVPLDYTLKTGEIVEILT 448


>gi|335041192|ref|ZP_08534308.1| (p)ppGpp synthetase I, SpoT/RelA [Caldalkalibacillus thermarum
           TA2.A1]
 gi|334178990|gb|EGL81639.1| (p)ppGpp synthetase I, SpoT/RelA [Caldalkalibacillus thermarum
           TA2.A1]
          Length = 721

 Score =  339 bits (870), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 198/492 (40%), Positives = 301/492 (61%), Gaps = 50/492 (10%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           +YLSP++++ + RA   A +AH+GQ R+SGE +I HPVEVA IL  L+LD  +IAA LLH
Sbjct: 12  TYLSPDDVQFIERAYQFARDAHEGQYRQSGEEYINHPVEVAGILANLQLDAVTIAAALLH 71

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D +EDT   T E +EE+FG  V  +V G   V+KL ++K K++    ++ +A++ R+MF+
Sbjct: 72  DVIEDTTA-TVEELEEQFGEEVALLVNG---VTKLKRIKYKSQ----EEQQAENHRRMFV 123

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM +++RVI++KLADRLHNMRTL +MP  K+   A ETL++FAPLA  LG+  IK ELE+
Sbjct: 124 AMAKDLRVILIKLADRLHNMRTLKYMPEEKRRKKAEETLEIFAPLAHRLGISTIKWELED 183

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
           +S  Y N + Y ++   +     E E+ +++  +I+ +KIE+      + +K EI    K
Sbjct: 184 ISLRYLNPQQYYRIVHLMKQKRAEREQHIQKVIEIIRQKIEE------VGIKAEISGRPK 237

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIY+ + + + + NE+  +  +RII++              + CY VLG++H  W P
Sbjct: 238 HIYSIYRKMQEQKKAFNEIYDLMAIRIIVE------------TVRDCYAVLGIIHTCWKP 285

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PKPN YQSLHTT++ +  +    LEVQIRT EM   AE GIAAH++ + 
Sbjct: 286 LPGRFKDYIAMPKPNMYQSLHTTVMSYKGQP---LEVQIRTHEMHRTAEYGIAAHWAYK- 341

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNN-ANIALRISWLNAIREWQEEFVGNMTSREFVDTIT 557
                            GK +   + + +  +++W   + E Q++      +REF++++ 
Sbjct: 342 ----------------EGKNLKETSPSALDEKLTWFREVLESQQD---AQDAREFMESLK 382

Query: 558 RDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANA 617
            DL    VFVFTP+G++  LP G+  +D+AY IHTE+GN+ V AKVNG +V   H L   
Sbjct: 383 MDLFSDVVFVFTPKGDVIELPAGSVPLDFAYRIHTEVGNRCVGAKVNGKIVPLDHELKTG 442

Query: 618 EVVEIITYNVSF 629
           ++VEI+T   S+
Sbjct: 443 DIVEILTSKHSY 454


>gi|358466796|ref|ZP_09176585.1| hypothetical protein HMPREF9093_01060 [Fusobacterium sp. oral taxon
           370 str. F0437]
 gi|357068679|gb|EHI78668.1| hypothetical protein HMPREF9093_01060 [Fusobacterium sp. oral taxon
           370 str. F0437]
          Length = 725

 Score =  339 bits (870), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 192/497 (38%), Positives = 299/497 (60%), Gaps = 58/497 (11%)

Query: 128 ERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELEL 187
           E+L E  +        N+L+L   AL  A E+H GQ R+SG+ +I+HPVEVA+IL ++++
Sbjct: 6   EQLLEKAKANHLNYDFNKLKL---ALAFAEESHKGQYRKSGDDYIVHPVEVAKILMDMKM 62

Query: 188 DWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQD 247
           D +++ AGLLHD VEDT ++    I+  FG TV  +V+G TK+  L     KN+      
Sbjct: 63  DTDTVVAGLLHDVVEDT-LIPIADIKYNFGDTVAILVDGVTKLKALPN-GTKNQ------ 114

Query: 248 VKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLL 307
             A+++R+M LAM E +RVI++KLADRLHNMRTL  M P KQ +I+ ETL ++APLA  L
Sbjct: 115 --AENIRKMILAMAENIRVILIKLADRLHNMRTLKFMKPEKQQTISKETLDIYAPLAHRL 172

Query: 308 GMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLM 367
           GM +IKSELE+L+F Y + E+Y ++K+ V +  +E +  +E   + + + + D      +
Sbjct: 173 GMAKIKSELEDLAFSYLHHEEYLEIKKLVENTKEERKDYIENFIRTMKRTLVD------L 226

Query: 368 TVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYH 427
            +K E++   K  YSIY+ + +     +++  +  +R+I++ K              CYH
Sbjct: 227 GLKAEVKGRFKHFYSIYRKMYQKGKEFDDIYDLMGVRVIVEDKAA------------CYH 274

Query: 428 VLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAE 487
           VLG+VH  +TP+P   KDYIA PK N YQS+HTT++  L +    +E+QIRT++MD IAE
Sbjct: 275 VLGIVHSQYTPVPGRFKDYIAVPKSNNYQSIHTTIVGPLGKF---IEIQIRTKDMDDIAE 331

Query: 488 RGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNM 547
            GIAAH++            + N ++ +   +            WL  I E+Q E   + 
Sbjct: 332 EGIAAHWN-----------YKENKKTSKDDNIY----------GWLRHIIEFQNE---SD 367

Query: 548 TSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNL 607
           ++ +F++ +T D+    +F F+P+G+I  LP GAT +D+A+M+HT++G K V AKVN  +
Sbjct: 368 STEDFIEGVTGDIDRGTIFTFSPKGDIIELPVGATALDFAFMVHTQVGCKCVGAKVNNRM 427

Query: 608 VSPTHVLANAEVVEIIT 624
           V+  H L + + VEIIT
Sbjct: 428 VTIDHKLKSGDKVEIIT 444


>gi|304436591|ref|ZP_07396560.1| GTP diphosphokinase [Selenomonas sp. oral taxon 149 str. 67H29BP]
 gi|304370287|gb|EFM23943.1| GTP diphosphokinase [Selenomonas sp. oral taxon 149 str. 67H29BP]
          Length = 739

 Score =  339 bits (870), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 199/492 (40%), Positives = 288/492 (58%), Gaps = 51/492 (10%)

Query: 138 ISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           I+   PN ++  + RA   A  AH GQ+R SGEP+I+HP+ VA IL  L LD E+I A  
Sbjct: 17  IAAYQPNADINKIIRAYEFAANAHRGQERVSGEPYIVHPMHVAYILTTLHLDDETICAAF 76

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT   T E IE  FG  V  +++G   V+KLG++    E+ S +DVK ++ R+M
Sbjct: 77  LHDVVEDTQT-TLEEIEAVFGKNVMTLIDG---VTKLGRI----ESMSKEDVKLENYRKM 128

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
           FLAM +++RVI++KLADRLHNMRTL +M   K+  IA ETL+V+APLA  LG+  IK+EL
Sbjct: 129 FLAMAKDIRVIMIKLADRLHNMRTLKYMREDKRQRIARETLEVYAPLANRLGISGIKAEL 188

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+L   Y   E Y  +   V    +E ++ +++A + +  ++E         ++ EI+  
Sbjct: 189 EDLCLRYLEPEAYYTLVEEVKQKRRERQEFIQDAVQKIRAQLE------TAGIEAEIKGR 242

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSIY+ + +   SINE+  ++ +R+            L S  + CY VLG++H +W
Sbjct: 243 AKHFYSIYRKMKRDNKSINEIYDLSAVRV------------LVSTVKDCYGVLGVIHAMW 290

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            PIP   KDYIA PK NGYQSLHTT++         LE+QIRT+ M  I+E GIAAH+  
Sbjct: 291 KPIPGRFKDYIAMPKSNGYQSLHTTVMT----EGDPLEIQIRTKAMHQISEFGIAAHWKY 346

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +                  G++V   + N   ++SWL  +   Q+E+      +EF + +
Sbjct: 347 K----------------EAGRSVGAGDEN-DQKMSWLRQMVSLQKEY---DDPKEFFEAL 386

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             D+    VFVFTPRG++ +LPKG+  +D+AY IHTEIG+  V AKVNG +V   + L N
Sbjct: 387 KLDVFSDEVFVFTPRGDVIDLPKGSNPIDFAYHIHTEIGHHCVGAKVNGKIVPLEYKLKN 446

Query: 617 AEVVEIITYNVS 628
            ++V I+T   S
Sbjct: 447 GDIVSIVTNKAS 458


>gi|3377803|gb|AAC28176.1| T2H3.9 [Arabidopsis thaliana]
          Length = 615

 Score =  339 bits (870), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 162/204 (79%), Positives = 175/204 (85%), Gaps = 15/204 (7%)

Query: 423 QICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEM 482
           +ICYHVLGLVH IW PIPR +KDYIATPKPNGYQSLHTT               IRTEEM
Sbjct: 238 EICYHVLGLVHEIWKPIPRTVKDYIATPKPNGYQSLHTT---------------IRTEEM 282

Query: 483 DLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEE 542
           DLIAERGIA +Y+G+   TGLVG+A P GR+ RGKT CLNNA+ ALR+ WLNAIREWQEE
Sbjct: 283 DLIAERGIAVYYNGKSLSTGLVGNAVPLGRNSRGKTGCLNNADFALRVGWLNAIREWQEE 342

Query: 543 FVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAK 602
           FVGNM+SREFVDTITRDLLGSRVFVFTP+GEIKNLPKGATVVDYAY+IHTEIGNKMVAAK
Sbjct: 343 FVGNMSSREFVDTITRDLLGSRVFVFTPKGEIKNLPKGATVVDYAYLIHTEIGNKMVAAK 402

Query: 603 VNGNLVSPTHVLANAEVVEIITYN 626
           VNGNLVSPTHVL NAEVVEI+TYN
Sbjct: 403 VNGNLVSPTHVLENAEVVEIVTYN 426



 Score =  329 bits (843), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 166/221 (75%), Positives = 178/221 (80%), Gaps = 26/221 (11%)

Query: 155 LAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEE 214
           LAFEAH GQKRRSGEPFIIHPV VARILGELELDWESI AGLLHDTVEDTN +TFE+IEE
Sbjct: 18  LAFEAHHGQKRRSGEPFIIHPVAVARILGELELDWESIVAGLLHDTVEDTNFITFEKIEE 77

Query: 215 EFGATVRRIVEGETKV--------------------------SKLGKLKCKNENHSVQDV 248
           EFGATVR IVEGETKV                          SKLGKLKCK E+ ++QDV
Sbjct: 78  EFGATVRHIVEGETKVCLSVFATIFFLSYYRERTPRFLCDEVSKLGKLKCKTESETIQDV 137

Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
           KADDLRQMFLAMT+EVRVIIVKLADRLHNMRTL HMPPHKQ  ++ ETLQVFAPLAKLLG
Sbjct: 138 KADDLRQMFLAMTDEVRVIIVKLADRLHNMRTLCHMPPHKQVILSRETLQVFAPLAKLLG 197

Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEE 349
           MY IKSELENLSFMY +AEDY +V  R+A+LYKEHEKEL E
Sbjct: 198 MYSIKSELENLSFMYVSAEDYDRVTSRIANLYKEHEKELTE 238


>gi|306832661|ref|ZP_07465800.1| GTP diphosphokinase [Streptococcus bovis ATCC 700338]
 gi|304425269|gb|EFM28396.1| GTP diphosphokinase [Streptococcus bovis ATCC 700338]
          Length = 739

 Score =  339 bits (870), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 191/494 (38%), Positives = 299/494 (60%), Gaps = 49/494 (9%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  Y+S +++ +V++AL    +AH  Q R+SGEP+IIHP++VA IL +L LD  ++A G 
Sbjct: 16  TAQYMSESDVAIVQKALDYVTKAHISQVRQSGEPYIIHPIQVAGILADLHLDVVTVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT V T + IE EFG  VR IV+G   V+KLGK++ K+    +    A++ R+M
Sbjct: 76  LHDVVEDTEV-TLDDIEAEFGKDVRDIVDG---VTKLGKVEYKSHEEQL----AENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM++++RVI+VKLADRLHNMRTL H+   KQ  I+ ET++++APLA  LG+ +IK EL
Sbjct: 128 LMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y +  ++ K+   + +  +E E  ++E    ++KKI+D  +     +  E+   
Sbjct: 188 EDLSFRYLDEIEFYKISHMMKEKRREREALVDE----IVKKIKD--YTQEQGLYGEVYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSIY+ +   +   +++  +  +R I++           +P  + Y ++G +H +W
Sbjct: 242 PKHIYSIYRKMRDKKKRFDQIYDLIAIRCIME-----------TPSDV-YAMVGYIHELW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA PK NGYQS+HTT    +Y     +E+QIRT+EM  +AE G+AAH++ 
Sbjct: 290 RPMPGRFKDYIAAPKANGYQSIHTT----VYGPKGPIEIQIRTKEMHQVAEYGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  + G V                 +N   A+ ++W+  + E Q+    N  + +FVD++
Sbjct: 346 KQGIKGKV-----------------DNQEQAVGMNWIKELVELQD--ASNGDAVDFVDSV 386

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
            +D+   R++VFTP G ++ LPK +  +D+AY IHT++G K V AKVNG +V  T  L  
Sbjct: 387 KQDIFSERIYVFTPTGAVQELPKDSGPIDFAYAIHTQVGEKAVGAKVNGRMVPLTAKLKT 446

Query: 617 AEVVEIITYNVSFS 630
            +VVEI+T   SF 
Sbjct: 447 GDVVEIVTNPNSFG 460


>gi|294618771|ref|ZP_06698298.1| GTP pyrophosphokinase [Enterococcus faecium E1679]
 gi|291594959|gb|EFF26309.1| GTP pyrophosphokinase [Enterococcus faecium E1679]
          Length = 737

 Score =  339 bits (870), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 194/493 (39%), Positives = 288/493 (58%), Gaps = 51/493 (10%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
            Y+ P  +  V +A   A  AHDGQ R+SGEP+IIHP++VA IL +L++D  ++A G LH
Sbjct: 18  QYMGPEHVAFVEKACEYATAAHDGQFRKSGEPYIIHPIQVAGILADLKMDPHTVATGFLH 77

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT + T E + EEFG  V  +V+G   V+KLGK+K K+    +    A++ R+M L
Sbjct: 78  DVVEDTEI-TLEDLREEFGDDVAMLVDG---VTKLGKIKYKSHEEQL----AENHRKMLL 129

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM +++RVI+VKLADRLHNMRTL H+   KQ  IA ETL+++APLA  LG+ +IK ELE+
Sbjct: 130 AMAQDLRVIMVKLADRLHNMRTLKHLREDKQRRIAQETLEIYAPLAHRLGISRIKWELED 189

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQF-LDLMTVKTEIRSVC 377
            +  Y N + Y ++   +       + + EE  K +   +ED +   + + +  EI    
Sbjct: 190 TALRYLNPKQYYRIVHLM-------QTKREEREKYVSGTVEDIRIATEELGIFAEIYGRP 242

Query: 378 KEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWT 437
           K  YSIY+ +   +   NE+  +  +R+I+               + CY VLG +H  W 
Sbjct: 243 KHIYSIYRKMKDQKKQFNEIYDLLAIRVIV------------DSIKDCYAVLGAIHTKWK 290

Query: 438 PIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGR 497
           P+P   KDYIA PK N YQSLHTT+I     +   +E+QIRT+EM  IAE G+AAH++  
Sbjct: 291 PMPGRFKDYIAMPKANMYQSLHTTVIG---PAGNPVEIQIRTQEMHEIAEFGVAAHWA-- 345

Query: 498 VFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTIT 557
            +  G      P+G              +  ++SW + I E Q+E   +  + EF++ + 
Sbjct: 346 -YKEGKNEKVEPDG--------------MTKQLSWFHEILELQDE---SYDASEFMEGVK 387

Query: 558 RDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANA 617
            D+   +V+VFTP+G++  LPKG+  +D+AY IHT+IGNK   AKVNG +V   + L N 
Sbjct: 388 GDIFSDKVYVFTPKGDVTELPKGSGPLDFAYSIHTDIGNKTTGAKVNGKMVQLDYKLKNG 447

Query: 618 EVVEIITYNVSFS 630
           +++EI+T   SF 
Sbjct: 448 DIIEIMTSPNSFG 460


>gi|257899574|ref|ZP_05679227.1| RelA/SpoT protein [Enterococcus faecium Com15]
 gi|257837486|gb|EEV62560.1| RelA/SpoT protein [Enterococcus faecium Com15]
          Length = 737

 Score =  339 bits (870), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 195/493 (39%), Positives = 288/493 (58%), Gaps = 51/493 (10%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
            Y+ P  +  V +A   A  AHDGQ R+SGEP+IIHP++VA IL +L++D  ++A G LH
Sbjct: 18  QYMGPEHVAFVEKACEYATAAHDGQFRKSGEPYIIHPIQVAGILADLKMDPHTVATGFLH 77

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT V T E + EEFG  V  +V+G   V+KLGK+K K+    +    A++ R+M L
Sbjct: 78  DVVEDTEV-TLEDLREEFGDDVAMLVDG---VTKLGKIKYKSHEEQL----AENHRKMLL 129

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM +++RVI+VKLADRLHNMRTL H+   KQ  IA ETL+++APLA  LG+ +IK ELE+
Sbjct: 130 AMAQDLRVIMVKLADRLHNMRTLKHLREDKQRRIAQETLEIYAPLAHRLGISRIKWELED 189

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQF-LDLMTVKTEIRSVC 377
            +  Y N + Y ++   +       + + EE  K +   +ED +   + + +  EI    
Sbjct: 190 TALRYLNPKQYYRIVHLM-------QTKREEREKYVNGTVEDIRVATEELGIFAEIYGRP 242

Query: 378 KEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWT 437
           K  YSIY+ +   +   NE+  +  +R+I+               + CY VLG +H  W 
Sbjct: 243 KHIYSIYRKMKDQKKQFNEIYDLLAIRVIV------------DSIKDCYAVLGAIHTKWK 290

Query: 438 PIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGR 497
           P+P   KDYIA PK N YQSLHTT+I     +   +E+QIRT+EM  IAE G+AAH++  
Sbjct: 291 PMPGRFKDYIAMPKANMYQSLHTTVIG---PAGNPVEIQIRTQEMHEIAEFGVAAHWA-- 345

Query: 498 VFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTIT 557
            +  G      P+G              +  ++SW + I E Q+E   +  + EF++ + 
Sbjct: 346 -YKEGKNEKVEPDG--------------MTKQLSWFHEILELQDE---SYDASEFMEGVK 387

Query: 558 RDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANA 617
            D+   +V+VFTP+G++  LPKG+  +D+AY IHT+IGNK   AKVNG +V   + L N 
Sbjct: 388 GDIFSDKVYVFTPKGDVTELPKGSGPLDFAYSIHTDIGNKTTGAKVNGKMVQLDYKLKNG 447

Query: 618 EVVEIITYNVSFS 630
           +++EI+T   SF 
Sbjct: 448 DIIEIMTSPNSFG 460


>gi|238926103|ref|ZP_04657863.1| GTP diphosphokinase [Selenomonas flueggei ATCC 43531]
 gi|238885993|gb|EEQ49631.1| GTP diphosphokinase [Selenomonas flueggei ATCC 43531]
          Length = 739

 Score =  339 bits (870), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 201/492 (40%), Positives = 289/492 (58%), Gaps = 51/492 (10%)

Query: 138 ISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           I+   PN ++  + RA   A  AH GQ+R SGEP+I+HP+ VA IL  L LD E+I A  
Sbjct: 17  IAAYQPNADINKIVRAYEFAANAHRGQERVSGEPYIVHPMHVAYILTTLHLDDETICAAF 76

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT   T E IE  FG  V  +++G   V+KLG++    E+ S +DVK ++ R+M
Sbjct: 77  LHDVVEDTQT-TLEEIEAVFGKNVMTLIDG---VTKLGRI----ESMSKEDVKLENYRKM 128

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
           FLAM +++RVI++KLADRLHNMRTL +M   K+  IA ETL+V+APLA  LG+  IK+EL
Sbjct: 129 FLAMAKDIRVIMIKLADRLHNMRTLKYMREDKRQRIARETLEVYAPLANRLGISGIKAEL 188

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+L   Y   E Y  +   V    +E ++ +++A    ++KI     L+   ++ EI+  
Sbjct: 189 EDLCLRYLEPEAYYTLVEEVKQKRRERQEFIQDA----VQKIRAQ--LEAAGIEAEIKGR 242

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSIY+ + +   SINE+  ++ +R+            L S  + CY VLG++H +W
Sbjct: 243 AKHFYSIYRKMKRDNKSINEIYDLSAVRV------------LVSTVKDCYGVLGVIHAMW 290

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            PIP   KDYIA PK NGYQSLHTT++         LE+QIRT+ M  I+E GIAAH+  
Sbjct: 291 KPIPGRFKDYIAMPKSNGYQSLHTTVMT----EGDPLEIQIRTKAMHQISEFGIAAHWKY 346

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +                  G++V   + N   ++SWL  +   Q+E+      +EF + +
Sbjct: 347 K----------------EAGRSVGAGDEN-DQKMSWLRQMVSLQKEY---DDPKEFFEAL 386

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             D+    VFVFTPRG++ +LPKG+  +D+AY IHTEIG+  V AKVNG +V   + L N
Sbjct: 387 KLDVFSDEVFVFTPRGDVIDLPKGSNPIDFAYHIHTEIGHHCVGAKVNGKIVPLEYKLKN 446

Query: 617 AEVVEIITYNVS 628
            ++V I+T   S
Sbjct: 447 GDIVSIVTNKAS 458


>gi|348027280|ref|YP_004767085.1| GTP diphosphokinase [Megasphaera elsdenii DSM 20460]
 gi|341823334|emb|CCC74258.1| GTP diphosphokinase [Megasphaera elsdenii DSM 20460]
          Length = 734

 Score =  339 bits (870), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 195/490 (39%), Positives = 283/490 (57%), Gaps = 51/490 (10%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           SYL   + + V +A  LA EAH  Q+R SGEP+I+HP+ VA+IL ++++D  +I A LLH
Sbjct: 19  SYLPKAKCDDVTKAYQLAEEAHKDQRRVSGEPYILHPLAVAQILADMKIDTTTITASLLH 78

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT+  T + +++ FG  V  +V+G TK+S+L          + +D + + +R+MFL
Sbjct: 79  DVVEDTSY-TLDDLKKMFGKEVAFLVDGVTKLSRLN-------YRTKEDQQLNSMRKMFL 130

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM ++VRV+++KLADRLHNMRTL +M   KQ  IA ETL++FAPLA  LG++ IK ELE+
Sbjct: 131 AMAKDVRVVVIKLADRLHNMRTLRYMRSDKQKRIAQETLEIFAPLAHRLGIFNIKWELED 190

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
           LSF Y   + Y  +  ++       E+ + EA  +L K       LD   +  EI    K
Sbjct: 191 LSFRYLEPDKYYDLVDQMKQKRHVREEIVNEAIDVLKKA------LDEAHIHCEINGRPK 244

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIYK + K    +++V  +  +R+I+               + CY VLG+VH +W P
Sbjct: 245 HFYSIYKKMKKDNRDLSQVYDLFAIRVIV------------DDVKDCYGVLGIVHSLWKP 292

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PKPN YQSLHTT+I    +    +E+QIRT EM  IAE G+AAH+    
Sbjct: 293 LPYRFKDYIAMPKPNNYQSLHTTVIGTRGQP---VEIQIRTWEMHRIAEYGVAAHW---- 345

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                        R   G     N      ++ WL  + EWQ+        +EFV+ +  
Sbjct: 346 -------------RYKEGNQTA-NKDAFDEKMGWLRNLLEWQD----TSNPKEFVNALKL 387

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           D     VFVF+PRG++ +LP+GA  +D+AY IHT++G++ V AK+NG +V   + L N +
Sbjct: 388 DAFSDEVFVFSPRGDVIDLPQGAIPIDFAYRIHTDVGHRCVGAKINGKIVPLDYKLKNGD 447

Query: 619 VVEIITYNVS 628
           +VEIIT  V 
Sbjct: 448 IVEIITSKVG 457


>gi|167767126|ref|ZP_02439179.1| hypothetical protein CLOSS21_01644 [Clostridium sp. SS2/1]
 gi|167711101|gb|EDS21680.1| RelA/SpoT family protein [Clostridium sp. SS2/1]
 gi|291559545|emb|CBL38345.1| (p)ppGpp synthetase, RelA/SpoT family [butyrate-producing bacterium
           SSC/2]
          Length = 765

 Score =  339 bits (870), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 207/515 (40%), Positives = 297/515 (57%), Gaps = 64/515 (12%)

Query: 118 SSDAFKEDSPERLWEDLRPTI-SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPV 176
           S D+F    PE L   L  T+ S     ++E V RA  +A++AH+ QKR+SGEP+IIHP+
Sbjct: 18  SPDSFT--PPEELKRQLITTMQSIYDEEDIEAVERAYKVAYKAHEKQKRKSGEPYIIHPI 75

Query: 177 EVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKL 236
            VA IL ELELD E+I AGLLHD VEDT   T E I  +FG  V ++V+G TK+ +L   
Sbjct: 76  CVAIILAELELDKETIMAGLLHDVVEDTET-THEDIVRDFGEEVAQLVDGVTKLGQLSYS 134

Query: 237 KCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATET 296
           K K E      V+A++LR+MFLAM +++RVI++KLADRLHNMRT+  M P KQ   + ET
Sbjct: 135 KDKIE------VQAENLRKMFLAMAKDIRVILIKLADRLHNMRTMQFMRPEKQKEKSRET 188

Query: 297 LQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMK 356
           + ++AP+A  LG+ +IK EL++L+  Y   + Y  ++R +    +E E  ++E    ++ 
Sbjct: 189 MDIYAPIAHRLGISKIKVELDDLALRYLKPDVYEDLERSLDSAKEEREAFIQE----IVD 244

Query: 357 KIEDDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVG 416
           +++    +D   +K EI    K  +SIYK ++    +I+++  +  +RI +         
Sbjct: 245 EVKG--HIDRAGIKAEIDGRVKHMFSIYKKMVNQHKTIDQIYDLFAVRIKV--------- 293

Query: 417 PLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMF 471
                 + CY  LG++H ++ PIP   KDYIA PKPN YQSLHTTLI     PF      
Sbjct: 294 ---DTVKDCYAALGIIHEMYKPIPGRFKDYIAMPKPNMYQSLHTTLIGPEGHPF------ 344

Query: 472 RLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRIS 531
             E+QIRT EM  +AE GIAAH+  +                    T  LN      ++S
Sbjct: 345 --EIQIRTFEMHRVAEYGIAAHWKYK----------------ENNNTKGLNKEE--EKLS 384

Query: 532 WLNAIREWQEEFVGNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYM 589
           WL  + EWQ +   N   +EF+  +    DL   +V+ FTP G++KNL  G+T +D+AY 
Sbjct: 385 WLREVLEWQRDMDDN---KEFLSLLKTNLDLFAEQVYCFTPNGDVKNLANGSTPIDFAYS 441

Query: 590 IHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
           IH+ +GNKMV A+VNG  V   + L N + VEIIT
Sbjct: 442 IHSAVGNKMVGARVNGRQVPFDYHLQNGDRVEIIT 476


>gi|116872952|ref|YP_849733.1| GTP pyrophosphokinase [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|116741830|emb|CAK20954.1| GTP pyrophosphokinase [Listeria welshimeri serovar 6b str.
           SLCC5334]
          Length = 738

 Score =  339 bits (870), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 193/490 (39%), Positives = 292/490 (59%), Gaps = 50/490 (10%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++   L LV++A   A ++H  Q R+SGEP+IIHP++VA IL EL++D  ++A+G LHD
Sbjct: 19  YMNQEHLALVKKAYEFARDSHKEQFRKSGEPYIIHPIQVAGILVELKMDPSTVASGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            VEDT  VT   +EE F + V  +V+G   V+KLGK+K K    S ++ +A++ R+MF+A
Sbjct: 79  VVEDT-PVTLADLEEAFDSEVAMLVDG---VTKLGKIKYK----SHEEQQAENHRKMFIA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M +++RVI++KLADRLHNMRTL H+P  KQ  IA ETL++FAPLA  LG+ ++K ELE+ 
Sbjct: 131 MAQDIRVILIKLADRLHNMRTLKHLPVEKQRRIANETLEIFAPLAHRLGISRVKWELEDT 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           +  Y N + Y     R+  L K+     E     ++  + ++  LD + ++ +I    K 
Sbjct: 191 ALRYLNPQQYY----RIVHLMKQKRDARERYLHDVIDGVNEN--LDELNIQADISGRPKH 244

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIY+ + +     NE+  +  +RI++            S  + CY VLG++H  W P+
Sbjct: 245 IYSIYRKMSEQNKQFNEIYDLLAVRIVV------------SSIKDCYAVLGIIHTRWKPM 292

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK N YQS+HTT+I    E    LEVQIRT EM  IAE G+AAH+     
Sbjct: 293 PGRFKDYIAMPKSNMYQSIHTTVIGPQGEP---LEVQIRTHEMHQIAEYGVAAHW----- 344

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
                  A   G+    KT   N      +++W   I E+Q E   +  + EF++++  D
Sbjct: 345 -------AYKEGKVVNSKTSFDN------KLTWFREILEYQNE---SDNAEEFMESLKLD 388

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           L    V+VFTP+G++  LP G+  +D+AY +HTEIGNK + AK+NG +V+  + L   ++
Sbjct: 389 LFADVVYVFTPKGDVYELPNGSVPLDFAYRVHTEIGNKTIGAKINGKIVTLDYKLKTGDI 448

Query: 620 VEIITYNVSF 629
           ++I+T   S+
Sbjct: 449 IDILTSKHSY 458


>gi|325568309|ref|ZP_08144676.1| GTP diphosphokinase [Enterococcus casseliflavus ATCC 12755]
 gi|420264623|ref|ZP_14767252.1| GTP diphosphokinase [Enterococcus sp. C1]
 gi|325158078|gb|EGC70231.1| GTP diphosphokinase [Enterococcus casseliflavus ATCC 12755]
 gi|394767937|gb|EJF48167.1| GTP diphosphokinase [Enterococcus sp. C1]
          Length = 736

 Score =  339 bits (870), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 192/490 (39%), Positives = 287/490 (58%), Gaps = 49/490 (10%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y+S   +  V++AL  A EAH  Q R+SGEP+IIHP++VA IL EL++D  ++A G LHD
Sbjct: 19  YMSEEHVAFVQKALDYATEAHKEQFRKSGEPYIIHPIQVAGILAELQMDPHTVATGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            VEDT+V T   ++EEFGA V  +V+G   V+KLGK+K K+    +    A++ R+M +A
Sbjct: 79  VVEDTDV-TLADLKEEFGADVAMLVDG---VTKLGKIKYKSHEEQL----AENHRKMLIA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M +++RVI+VKLADRLHNMRTL H+   KQ  IA ET++++APLA  LG+ +IK ELE++
Sbjct: 131 MAQDLRVIMVKLADRLHNMRTLKHLREDKQRRIAQETMEIYAPLAHRLGISRIKWELEDI 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           S  Y N + Y ++   +    +E E  + E  + +    E+      + +  EI    K 
Sbjct: 191 SLRYLNPQQYYRIVHLMQTKREERESYVSETVEEIRIATEE------LDIYAEIYGRPKH 244

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIY+ +   +   NE+  +  +R+I+               + CY VLG +H  W P+
Sbjct: 245 IYSIYRKMKDQKKQFNEIYDLLAIRVIV------------DSIKDCYAVLGTIHTKWKPM 292

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK N YQSLHTT+I         +E+QIRT EM  IAE G+AAH++ +  
Sbjct: 293 PGRFKDYIAMPKANMYQSLHTTVIG---PKGNPVEIQIRTHEMHEIAEFGVAAHWAYK-- 347

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
                           GKT  +    +  ++ W   I E Q+E   +  + EF++ +  D
Sbjct: 348 ---------------EGKTEKVRADKMTQQVGWFREILELQDE---SYDASEFMEGVKGD 389

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           +   +V+VFTP+G++  LP+G++ +D+AY IHT+IGNK   AKVNG +V   + L N ++
Sbjct: 390 IFSDKVYVFTPKGDVTELPQGSSPLDFAYSIHTDIGNKTTGAKVNGKMVQLDYKLKNGDI 449

Query: 620 VEIITYNVSF 629
           +EI+T   SF
Sbjct: 450 IEILTSPNSF 459


>gi|310778489|ref|YP_003966822.1| (p)ppGpp synthetase I SpoT/RelA [Ilyobacter polytropus DSM 2926]
 gi|309747812|gb|ADO82474.1| (p)ppGpp synthetase I, SpoT/RelA [Ilyobacter polytropus DSM 2926]
          Length = 718

 Score =  339 bits (870), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 205/490 (41%), Positives = 291/490 (59%), Gaps = 63/490 (12%)

Query: 141 LSPNELELVRRALMLAFE----AHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           +  N L++    ++LA+E     H GQ R+SG+ +IIHP+EV++IL  +++D ++I AG+
Sbjct: 11  IKKNNLKVDTDKILLAYEFAKECHVGQFRKSGDEYIIHPIEVSKILINMKMDTDTIVAGI 70

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGK-LKCKNENHSVQDVKADDLRQ 255
           LHD VEDT ++T   IE  FG +V ++V+G TK+S L K  K ++EN          +R+
Sbjct: 71  LHDIVEDT-LITVSDIEYNFGNSVAKLVDGVTKLSVLPKGTKKQHEN----------IRK 119

Query: 256 MFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSE 315
           M +AM +++RV+I+KLADRLHNMRTL +MP HKQ  I+ ETL++FAPLA  LGM  IK E
Sbjct: 120 MIVAMAQDIRVVIIKLADRLHNMRTLKYMPAHKQERISRETLEIFAPLAHRLGMAMIKCE 179

Query: 316 LENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRS 375
           LE+LS  Y   E Y ++ + +     E EK  E   K      E ++FL    +K E+  
Sbjct: 180 LEDLSLYYLEPEIYRELVKLINSKKAEREKYTEATKK------EIEKFLLENNIKGEVSG 233

Query: 376 VCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGI 435
             K  YSIYK + +     +E+  +  LRII++             +  CY+VLG++HG 
Sbjct: 234 RPKHFYSIYKKMYEKGKEFDEIYDLIALRIIVE------------TEGECYNVLGVLHGN 281

Query: 436 WTPIPRAMKDYIATPKPNGYQSLHTTLI-PFLYESMFRLEVQIRTEEMDLIAERGIAAHY 494
           + P+P   KDYIA PK NGYQS+HTT++ P   +  F +EVQIRTEEM  IAE G+AAH+
Sbjct: 282 YKPVPGRFKDYIAVPKSNGYQSIHTTIVGP---QGKF-IEVQIRTEEMHGIAEEGVAAHW 337

Query: 495 SGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVD 554
           S +                 RGK    ++       SWL  I EWQ+E      S EFV 
Sbjct: 338 SYK----------------ERGKVTKKDHV-----YSWLRQILEWQQE---ADNSEEFVK 373

Query: 555 TITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVL 614
           T+T D+L   VFVF+P+G++  L  GAT +D+A+ IHTEIG K V AK+N  +V   + L
Sbjct: 374 TVTGDILHETVFVFSPKGDVVELAYGATPLDFAFHIHTEIGLKCVGAKINDRIVPIDYKL 433

Query: 615 ANAEVVEIIT 624
            N + VE+IT
Sbjct: 434 QNGDKVEVIT 443


>gi|431381389|ref|ZP_19510991.1| RelA/SpoT family protein [Enterococcus faecium E1627]
 gi|430581751|gb|ELB20189.1| RelA/SpoT family protein [Enterococcus faecium E1627]
          Length = 737

 Score =  339 bits (870), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 194/493 (39%), Positives = 288/493 (58%), Gaps = 51/493 (10%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
            Y+ P  +  V +A   A  AHDGQ R+SGEP+IIHP++VA IL +L++D  ++A G LH
Sbjct: 18  QYMGPEHVAFVEKACEYATAAHDGQFRKSGEPYIIHPIQVAGILADLKMDPHTVATGFLH 77

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT + T E + EEFG  V  +V+G   V+KLGK+K K+    +    A++ R+M L
Sbjct: 78  DVVEDTEI-TLEDLREEFGDDVAMLVDG---VTKLGKIKYKSHEEQL----AENHRKMLL 129

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM +++RVI+VKLADRLHNMRTL H+   KQ  IA ETL+++APLA  LG+ +IK ELE+
Sbjct: 130 AMAQDLRVIMVKLADRLHNMRTLKHLREDKQRRIAQETLEIYAPLAHRLGISRIKWELED 189

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQF-LDLMTVKTEIRSVC 377
            +  Y N + Y ++   +       + + EE  K +   +ED +   + + +  EI    
Sbjct: 190 TALRYLNPKQYYRIVHLM-------QTKREEREKYVSGTVEDIRIATEELGIFAEIYGRP 242

Query: 378 KEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWT 437
           K  YSIY+ +   +   NE+  +  +R+I+               + CY VLG +H  W 
Sbjct: 243 KHIYSIYRKMKDQKKQFNEIYDLLAIRVIV------------DSIKDCYAVLGAIHTKWK 290

Query: 438 PIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGR 497
           P+P   KDYIA PK N YQSLHTT+I     +   +E+QIRT+EM  IAE G+AAH++  
Sbjct: 291 PMPGRFKDYIAMPKANMYQSLHTTVIG---PAGNPVEIQIRTQEMHEIAEFGVAAHWA-- 345

Query: 498 VFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTIT 557
            +  G      P+G              +  ++SW + I E Q+E   +  + EF++ + 
Sbjct: 346 -YKEGKNEKVEPDG--------------MTKQLSWFHEILELQDE---SYDASEFMEGVK 387

Query: 558 RDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANA 617
            D+   +V+VFTP+G++  LPKG+  +D+AY IHT+IGNK   AKVNG +V   + L N 
Sbjct: 388 GDIFSDKVYVFTPKGDVTELPKGSGPLDFAYSIHTDIGNKTTGAKVNGKMVQLDYKLKNG 447

Query: 618 EVVEIITYNVSFS 630
           +++EI+T   SF 
Sbjct: 448 DIIEIMTSPNSFG 460


>gi|294501369|ref|YP_003565069.1| GTP pyrophosphokinase [Bacillus megaterium QM B1551]
 gi|295706716|ref|YP_003599791.1| GTP pyrophosphokinase [Bacillus megaterium DSM 319]
 gi|294351306|gb|ADE71635.1| GTP pyrophosphokinase [Bacillus megaterium QM B1551]
 gi|294804375|gb|ADF41441.1| GTP pyrophosphokinase [Bacillus megaterium DSM 319]
          Length = 732

 Score =  339 bits (870), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 194/493 (39%), Positives = 297/493 (60%), Gaps = 51/493 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YL+  ++  V++A   A EAH  Q R+SGEP+IIHP++VA IL +L++D  +IAAG 
Sbjct: 16  TKRYLNEEDVAFVQKAYDFAKEAHKEQYRKSGEPYIIHPIQVAGILVDLDMDPATIAAGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT + T + +E+ F   V  +V+G   V+KLGK+K K    S ++ +A++ R+M
Sbjct: 76  LHDVVEDTEI-TLKDLEKAFNEEVAMLVDG---VTKLGKIKYK----SKEEQQAENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
           F+AM +++RVI++KLADRLHNMRTL H+P  KQ  I+ ETL++FAPLA  LG+ +IK EL
Sbjct: 128 FVAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRISNETLEIFAPLAHRLGISKIKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+ +  Y N + Y     R+ +L K+   E E+    ++ ++ +   +D +++K EI   
Sbjct: 188 EDTALRYLNPQQYY----RIVNLMKKKRAEREQYLAEVIDEVREQ--VDEVSIKVEISGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSIY+ +       NE+  +  +RII+            +  + CY VLG++H  W
Sbjct: 242 PKHIYSIYRKMALQNKQFNEIYDLLAVRIIV------------NSIKDCYAVLGIIHTCW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA PK N YQSLHTT+I    +    LEVQIRT +M  IAE GIAAH++ 
Sbjct: 290 KPMPGRFKDYIAMPKQNMYQSLHTTVIGPKGDP---LEVQIRTFDMHQIAEYGIAAHWAY 346

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +                  GKT    +A+   +++W   I E+Q +      + EF++++
Sbjct: 347 K-----------------EGKTA--EHASFEEKLTWFREILEFQND---ANDAEEFMESL 384

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             DL    V++FTP+G++  LP G+  +D++Y IH+EIGNK + AKVNG +V+  + L  
Sbjct: 385 KVDLFSDMVYIFTPKGDVIELPSGSVPIDFSYRIHSEIGNKTIGAKVNGKMVTLDYRLKT 444

Query: 617 AEVVEIITYNVSF 629
            +++EI+T   S+
Sbjct: 445 GDIIEILTSKHSY 457


>gi|257866975|ref|ZP_05646628.1| RelA/SpoT protein [Enterococcus casseliflavus EC30]
 gi|257873309|ref|ZP_05652962.1| RelA/SpoT protein [Enterococcus casseliflavus EC10]
 gi|257877051|ref|ZP_05656704.1| RelA/SpoT protein [Enterococcus casseliflavus EC20]
 gi|257801031|gb|EEV29961.1| RelA/SpoT protein [Enterococcus casseliflavus EC30]
 gi|257807473|gb|EEV36295.1| RelA/SpoT protein [Enterococcus casseliflavus EC10]
 gi|257811217|gb|EEV40037.1| RelA/SpoT protein [Enterococcus casseliflavus EC20]
          Length = 736

 Score =  339 bits (870), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 192/490 (39%), Positives = 287/490 (58%), Gaps = 49/490 (10%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y+S   +  V++AL  A EAH  Q R+SGEP+IIHP++VA IL EL++D  ++A G LHD
Sbjct: 19  YMSEEHVAFVQKALDYATEAHKEQFRKSGEPYIIHPIQVAGILAELQMDPHTVATGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            VEDT+V T   ++EEFGA V  +V+G   V+KLGK+K K+    +    A++ R+M +A
Sbjct: 79  VVEDTDV-TLADLKEEFGADVAMLVDG---VTKLGKIKYKSHEEQL----AENHRKMLIA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M +++RVI+VKLADRLHNMRTL H+   KQ  IA ET++++APLA  LG+ +IK ELE++
Sbjct: 131 MAQDLRVIMVKLADRLHNMRTLKHLREDKQRRIAQETMEIYAPLAHRLGISRIKWELEDI 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           S  Y N + Y ++   +    +E E  + E  + +    E+      + +  EI    K 
Sbjct: 191 SLRYLNPQQYYRIVHLMQTKREERESYVSETVEEIRIATEE------LDIYAEIYGRPKH 244

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIY+ +   +   NE+  +  +R+I+               + CY VLG +H  W P+
Sbjct: 245 IYSIYRKMKDQKKQFNEIYDLLAIRVIV------------DSIKDCYAVLGTIHTKWKPM 292

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK N YQSLHTT+I         +E+QIRT EM  IAE G+AAH++ +  
Sbjct: 293 PGRFKDYIAMPKANMYQSLHTTVIG---PKGNPVEIQIRTHEMHEIAEFGVAAHWAYK-- 347

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
                           GKT  +    +  ++ W   I E Q+E   +  + EF++ +  D
Sbjct: 348 ---------------EGKTEKVRADKMTQQVGWFREILELQDE---SYDASEFMEGVKGD 389

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           +   +V+VFTP+G++  LP+G++ +D+AY IHT+IGNK   AKVNG +V   + L N ++
Sbjct: 390 IFSDKVYVFTPKGDVTELPQGSSPLDFAYSIHTDIGNKTTGAKVNGKMVQLDYKLKNGDI 449

Query: 620 VEIITYNVSF 629
           +EI+T   SF
Sbjct: 450 IEILTSPNSF 459


>gi|153941234|ref|YP_001392337.1| GTP pyrophosphokinase [Clostridium botulinum F str. Langeland]
 gi|170754462|ref|YP_001782694.1| GTP pyrophosphokinase [Clostridium botulinum B1 str. Okra]
 gi|384463312|ref|YP_005675907.1| GTP pyrophosphokinase [Clostridium botulinum F str. 230613]
 gi|429246540|ref|ZP_19209858.1| GTP pyrophosphokinase [Clostridium botulinum CFSAN001628]
 gi|152937130|gb|ABS42628.1| GTP pyrophosphokinase [Clostridium botulinum F str. Langeland]
 gi|169119674|gb|ACA43510.1| putative GTP diphosphokinase/guanosine-3',5'-bis(diphosphate)
           3'-pyrophosphohydrolase [Clostridium botulinum B1 str.
           Okra]
 gi|295320329|gb|ADG00707.1| GTP pyrophosphokinase [Clostridium botulinum F str. 230613]
 gi|428756456|gb|EKX79010.1| GTP pyrophosphokinase [Clostridium botulinum CFSAN001628]
          Length = 723

 Score =  339 bits (870), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 200/501 (39%), Positives = 289/501 (57%), Gaps = 63/501 (12%)

Query: 130 LWEDLRPTISY-LSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
           + EDL   I Y  +  E+E +++A   A  AH  QKR SGEP+I HP EVA IL E+ +D
Sbjct: 1   MLEDLMIKIKYSFTEKEIEFIKKAYNFACNAHKEQKRISGEPYITHPEEVAIILFEMGMD 60

Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
             ++ AGL+HD VEDT   T+E + +EFG  V  +V G   V+KLGK++ K +    ++ 
Sbjct: 61  VNTMIAGLMHDVVEDTQY-TYEDVAKEFGNEVADLVNG---VTKLGKIEYKTK----EEQ 112

Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
           +AD++R+M LAMT+++RVI++KLADRLHNMRTL  MP  KQ   A ETL ++APLA  LG
Sbjct: 113 QADNVRKMLLAMTKDIRVILIKLADRLHNMRTLRFMPVEKQKEKAQETLDIYAPLAHRLG 172

Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
           + +IK ELE+L+F Y N  +Y  + R++A+   E E+ ++E    L       Q L    
Sbjct: 173 ISKIKWELEDLAFRYINPNEYYFLVRKIAEKRAEREEHIKEIISNLQ------QNLKRSG 226

Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
           +++EI    K  YSIYK +     +++++  +  +RI            L    + CY  
Sbjct: 227 IESEIDGRPKHFYSIYKKMHNKNKNLDQIFDLTAVRI------------LVDTVKDCYAA 274

Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMD 483
           LG+ H ++ PIP   KDYIA PKPN YQSLH+T++     PF        E+QIRT EM 
Sbjct: 275 LGIAHTVYKPIPGRFKDYIAMPKPNMYQSLHSTVMGVGGRPF--------EIQIRTYEMH 326

Query: 484 LIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEF 543
             AE GIAAH+                    + K    N+ NI L+++WL  + +WQ+E 
Sbjct: 327 KTAEYGIAAHW--------------------KYKEGVENSNNIDLKLTWLREMLDWQKE- 365

Query: 544 VGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKV 603
                  EF+     DL    VFVFTP+G++ +LP  AT VD+AY IHT+IG++ + AKV
Sbjct: 366 --TTDPEEFMQGFKIDLFSDEVFVFTPKGKVISLPNKATPVDFAYKIHTDIGHRCIGAKV 423

Query: 604 NGNLVSPTHVLANAEVVEIIT 624
           NG +V   + L   E++E++T
Sbjct: 424 NGKMVPLDYELKTGEIIEVLT 444


>gi|425054812|ref|ZP_18458314.1| GTP diphosphokinase [Enterococcus faecium 505]
 gi|430840370|ref|ZP_19458295.1| RelA/SpoT family protein [Enterococcus faecium E1007]
 gi|431064204|ref|ZP_19493551.1| RelA/SpoT family protein [Enterococcus faecium E1604]
 gi|431124683|ref|ZP_19498679.1| RelA/SpoT family protein [Enterococcus faecium E1613]
 gi|431593365|ref|ZP_19521694.1| RelA/SpoT family protein [Enterococcus faecium E1861]
 gi|431741443|ref|ZP_19530348.1| RelA/SpoT family protein [Enterococcus faecium E2039]
 gi|403035121|gb|EJY46526.1| GTP diphosphokinase [Enterococcus faecium 505]
 gi|430495135|gb|ELA71342.1| RelA/SpoT family protein [Enterococcus faecium E1007]
 gi|430566968|gb|ELB06056.1| RelA/SpoT family protein [Enterococcus faecium E1613]
 gi|430568845|gb|ELB07875.1| RelA/SpoT family protein [Enterococcus faecium E1604]
 gi|430591242|gb|ELB29280.1| RelA/SpoT family protein [Enterococcus faecium E1861]
 gi|430601621|gb|ELB39215.1| RelA/SpoT family protein [Enterococcus faecium E2039]
          Length = 786

 Score =  339 bits (869), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 195/493 (39%), Positives = 288/493 (58%), Gaps = 51/493 (10%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
            Y+ P  +  V +A   A  AHDGQ R+SGEP+IIHP++VA IL +L++D  ++A G LH
Sbjct: 67  QYMGPEHVAFVEKACEYATAAHDGQFRKSGEPYIIHPIQVAGILADLKMDPHTVATGFLH 126

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT V T E + EEFG  V  +V+G   V+KLGK+K K+    +    A++ R+M L
Sbjct: 127 DVVEDTEV-TLEDLREEFGDDVAMLVDG---VTKLGKIKYKSHEEQL----AENHRKMLL 178

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM +++RVI+VKLADRLHNMRTL H+   KQ  IA ETL+++APLA  LG+ +IK ELE+
Sbjct: 179 AMAQDLRVIMVKLADRLHNMRTLKHLREDKQRRIAQETLEIYAPLAHRLGISRIKWELED 238

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQF-LDLMTVKTEIRSVC 377
            +  Y N + Y ++   +       + + EE  K +   +ED +   + + +  EI    
Sbjct: 239 TALRYLNPKQYYRIVHLM-------QTKREEREKYVNGTVEDIRVATEELGIFAEIYGRP 291

Query: 378 KEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWT 437
           K  YSIY+ +   +   NE+  +  +R+I+               + CY VLG +H  W 
Sbjct: 292 KHIYSIYRKMKDQKKQFNEIYDLLAIRVIV------------DSIKDCYAVLGAIHTKWK 339

Query: 438 PIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGR 497
           P+P   KDYIA PK N YQSLHTT+I     +   +E+QIRT+EM  IAE G+AAH++  
Sbjct: 340 PMPGRFKDYIAMPKANMYQSLHTTVIG---PAGNPVEIQIRTQEMHEIAEFGVAAHWA-- 394

Query: 498 VFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTIT 557
            +  G      P+G              +  ++SW + I E Q+E   +  + EF++ + 
Sbjct: 395 -YKEGKNEKVEPDG--------------MTKQLSWFHEILELQDE---SYDASEFMEGVK 436

Query: 558 RDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANA 617
            D+   +V+VFTP+G++  LPKG+  +D+AY IHT+IGNK   AKVNG +V   + L N 
Sbjct: 437 GDIFSDKVYVFTPKGDVTELPKGSGPLDFAYSIHTDIGNKTTGAKVNGKMVQLDYKLKNG 496

Query: 618 EVVEIITYNVSFS 630
           +++EI+T   SF 
Sbjct: 497 DIIEIMTSPNSFG 509


>gi|257896966|ref|ZP_05676619.1| RelA/SpoT protein [Enterococcus faecium Com12]
 gi|257833531|gb|EEV59952.1| RelA/SpoT protein [Enterococcus faecium Com12]
          Length = 737

 Score =  339 bits (869), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 195/493 (39%), Positives = 288/493 (58%), Gaps = 51/493 (10%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
            Y+ P  +  V +A   A  AHDGQ R+SGEP+IIHP++VA IL +L++D  ++A G LH
Sbjct: 18  QYMGPEHVAFVEKACEYATAAHDGQFRKSGEPYIIHPIQVAGILADLKMDPHTVATGFLH 77

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT V T E + EEFG  V  +V+G   V+KLGK+K K+    +    A++ R+M L
Sbjct: 78  DVVEDTEV-TLEDLREEFGDDVAMLVDG---VTKLGKIKYKSHEEQL----AENHRKMLL 129

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM +++RVI+VKLADRLHNMRTL H+   KQ  IA ETL+++APLA  LG+ +IK ELE+
Sbjct: 130 AMAQDLRVIMVKLADRLHNMRTLKHLREDKQRRIAQETLEIYAPLAHRLGISRIKWELED 189

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQF-LDLMTVKTEIRSVC 377
            +  Y N + Y ++   +       + + EE  K +   +ED +   + + +  EI    
Sbjct: 190 TALRYLNPKQYYRIVHLM-------QTKREEREKYVNGTVEDIRVATEELGIFAEIYGRP 242

Query: 378 KEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWT 437
           K  YSIY+ +   +   NE+  +  +R+I+               + CY VLG +H  W 
Sbjct: 243 KHIYSIYRKMKDQKKQFNEIYDLLAIRVIV------------DSIKDCYAVLGAIHTKWK 290

Query: 438 PIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGR 497
           P+P   KDYIA PK N YQSLHTT+I     +   +E+QIRT+EM  IAE G+AAH++  
Sbjct: 291 PMPGRFKDYIAMPKANMYQSLHTTVIG---PAGNPVEIQIRTQEMHEIAEFGVAAHWA-- 345

Query: 498 VFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTIT 557
            +  G      P+G              +  ++SW + I E Q+E   +  + EF++ + 
Sbjct: 346 -YKEGKNEKVEPDG--------------MTKQLSWFHEILELQDE---SYDASEFMEGVK 387

Query: 558 RDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANA 617
            D+   +V+VFTP+G++  LPKG+  +D+AY IHT+IGNK   AKVNG +V   + L N 
Sbjct: 388 GDIFSDKVYVFTPKGDVTELPKGSGPLDFAYSIHTDIGNKTTGAKVNGKMVQLDYKLKNG 447

Query: 618 EVVEIITYNVSFS 630
           +++EI+T   SF 
Sbjct: 448 DIIEIMTSPNSFG 460


>gi|86606590|ref|YP_475353.1| RelA/SpoT family protein [Synechococcus sp. JA-3-3Ab]
 gi|86555132|gb|ABD00090.1| RelA/SpoT family protein [Synechococcus sp. JA-3-3Ab]
          Length = 760

 Score =  339 bits (869), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 199/494 (40%), Positives = 281/494 (56%), Gaps = 50/494 (10%)

Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
           EDL   +   +  E +L+RRA   A+  H GQKR+SG+P+I HPV VA +L EL  D  +
Sbjct: 35  EDLGDGLRSYTAEEADLLRRAFEFAYCLHKGQKRKSGDPYIAHPVAVASLLRELGGDAVT 94

Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
           +AAGLLHD VEDT V T E +E EFG  VR +VEG TK+S+      K E       +A+
Sbjct: 95  VAAGLLHDVVEDTEV-TLEALEAEFGPEVRLLVEGVTKLSQFN-FSSKTEQ------QAE 146

Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
           + R+MF+AM +++RVI+VKLADRLHNMRTL ++PPHKQ  IA ET+++FAPLA  LG++ 
Sbjct: 147 NFRRMFVAMAKDIRVIVVKLADRLHNMRTLQYLPPHKQKQIAAETMEIFAPLANRLGIWH 206

Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
            K ELE+L+F Y + E Y +++  V     E E E++   + L K +             
Sbjct: 207 FKWELEDLAFKYLDYEAYRQIQELVNAKRSEREAEIQAFIEELRKHLIQGGLEHF----- 261

Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
           EI    K  Y IY+ + + R   +E+  +  +R+I++                CY VL +
Sbjct: 262 EISGRPKHLYGIYRKMQQQRKEFHEIYDLLAVRVIVQTV------------SECYRVLAV 309

Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
           VH  + PIP   KDYI  PK N YQSLHT +I      +   EVQIRTEEM  +AE GIA
Sbjct: 310 VHNCFRPIPGRFKDYIGLPKANRYQSLHTAVIGLQGRPV---EVQIRTEEMHRVAEYGIA 366

Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
           AH+             +  G +P              R +WL  + EWQ +   +   +E
Sbjct: 367 AHWK-----------YKEAGSTPVKPE--------EERFTWLRQLLEWQNDLKDD---KE 404

Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
           ++DTI  +L  S V+VFTP+G++  LP+G+  VD+AY IH+EIG+    A+VN  +V   
Sbjct: 405 YLDTIRENLFESEVYVFTPKGDLLALPQGSCPVDFAYRIHSEIGDHCAGARVNNKIVPLN 464

Query: 612 HVLANAEVVEIITY 625
             L N ++V+IIT+
Sbjct: 465 TRLRNGDIVQIITH 478


>gi|431702948|ref|ZP_19525071.1| RelA/SpoT family protein [Enterococcus faecium E1904]
 gi|430597031|gb|ELB34842.1| RelA/SpoT family protein [Enterococcus faecium E1904]
          Length = 737

 Score =  339 bits (869), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 194/493 (39%), Positives = 288/493 (58%), Gaps = 51/493 (10%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
            Y+ P  +  V +A   A  AHDGQ R+SGEP+IIHP++VA IL +L++D  ++A G LH
Sbjct: 18  QYMGPEHVAFVEKACEYATAAHDGQFRKSGEPYIIHPIQVAGILADLKMDPHTVATGFLH 77

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT + T E + EEFG  V  +V+G   V+KLGK+K K+    +    A++ R+M L
Sbjct: 78  DVVEDTEI-TLEDLREEFGDDVAMLVDG---VTKLGKIKYKSHEEQL----AENHRKMLL 129

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM +++RVI+VKLADRLHNMRTL H+   KQ  IA ETL+++APLA  LG+ +IK ELE+
Sbjct: 130 AMAQDLRVIMVKLADRLHNMRTLKHLREDKQRRIAQETLEIYAPLAHRLGISRIKWELED 189

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQF-LDLMTVKTEIRSVC 377
            +  Y N + Y ++   +       + + EE  K +   +ED +   + + +  EI    
Sbjct: 190 TALRYLNPKQYYRIVHLM-------QTKREEREKYVSGTVEDIRIATEELGIFAEIYGRP 242

Query: 378 KEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWT 437
           K  YSIY+ +   +   NE+  +  +R+I+               + CY VLG +H  W 
Sbjct: 243 KHIYSIYRKMKDQKKQFNEIYDLLAIRVIV------------DSIKDCYAVLGAIHTKWK 290

Query: 438 PIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGR 497
           P+P   KDYIA PK N YQSLHTT+I     +   +E+QIRT+EM  IAE G+AAH++  
Sbjct: 291 PMPGRFKDYIAMPKANMYQSLHTTVIG---PAGNPVEIQIRTQEMHEIAEFGVAAHWA-- 345

Query: 498 VFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTIT 557
            +  G      P+G              +  ++SW + I E Q+E   +  + EF++ + 
Sbjct: 346 -YKEGKNEKVEPDG--------------MTKQLSWFHEILELQDE---SYDTSEFMEGVK 387

Query: 558 RDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANA 617
            D+   +V+VFTP+G++  LPKG+  +D+AY IHT+IGNK   AKVNG +V   + L N 
Sbjct: 388 GDIFSDKVYVFTPKGDVTELPKGSGPLDFAYSIHTDIGNKTTGAKVNGKMVQLDYKLKNG 447

Query: 618 EVVEIITYNVSFS 630
           +++EI+T   SF 
Sbjct: 448 DIIEIMTSPNSFG 460


>gi|430834057|ref|ZP_19452067.1| RelA/SpoT family protein [Enterococcus faecium E0679]
 gi|430485957|gb|ELA62838.1| RelA/SpoT family protein [Enterococcus faecium E0679]
          Length = 786

 Score =  339 bits (869), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 194/493 (39%), Positives = 288/493 (58%), Gaps = 51/493 (10%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
            Y+ P  +  V +A   A  AHDGQ R+SGEP+IIHP++VA IL +L++D  ++A G LH
Sbjct: 67  QYMGPEHVAFVEKACEYATAAHDGQFRKSGEPYIIHPIQVAGILADLKMDPHTVATGFLH 126

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT + T E + EEFG  V  +V+G   V+KLGK+K K+    +    A++ R+M L
Sbjct: 127 DVVEDTEI-TLEDLREEFGDDVAMLVDG---VTKLGKIKYKSHEEQL----AENHRKMLL 178

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM +++RVI+VKLADRLHNMRTL H+   KQ  IA ETL+++APLA  LG+ +IK ELE+
Sbjct: 179 AMAQDLRVIMVKLADRLHNMRTLKHLREDKQRRIAQETLEIYAPLAHRLGISRIKWELED 238

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQF-LDLMTVKTEIRSVC 377
            +  Y N + Y ++   +       + + EE  K +   +ED +   + + +  EI    
Sbjct: 239 TALRYLNPKQYYRIVHLM-------QTKREEREKYVSGTVEDIRIATEELGIFAEIYGRP 291

Query: 378 KEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWT 437
           K  YSIY+ +   +   NE+  +  +R+I+               + CY VLG +H  W 
Sbjct: 292 KHIYSIYRKMKDQKKQFNEIYDLLAIRVIV------------DSIKDCYAVLGAIHTKWK 339

Query: 438 PIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGR 497
           P+P   KDYIA PK N YQSLHTT+I     +   +E+QIRT+EM  IAE G+AAH++  
Sbjct: 340 PMPGRFKDYIAMPKANMYQSLHTTVIG---PAGNPVEIQIRTQEMHEIAEFGVAAHWA-- 394

Query: 498 VFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTIT 557
            +  G      P+G              +  ++SW + I E Q+E   +  + EF++ + 
Sbjct: 395 -YKEGKNEKVEPDG--------------MMKQLSWFHEILELQDE---SYDASEFMEGVK 436

Query: 558 RDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANA 617
            D+   +V+VFTP+G++  LPKG+  +D+AY IHT+IGNK   AKVNG +V   + L N 
Sbjct: 437 GDIFSDKVYVFTPKGDVTELPKGSGPLDFAYSIHTDIGNKTTGAKVNGKMVQLDYKLKNG 496

Query: 618 EVVEIITYNVSFS 630
           +++EI+T   SF 
Sbjct: 497 DIIEIMTSPNSFG 509


>gi|425044315|ref|ZP_18448481.1| GTP diphosphokinase [Enterococcus faecium 510]
 gi|403030120|gb|EJY41832.1| GTP diphosphokinase [Enterococcus faecium 510]
          Length = 737

 Score =  339 bits (869), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 194/493 (39%), Positives = 288/493 (58%), Gaps = 51/493 (10%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
            Y+ P  +  V +A   A  AHDGQ R+SGEP+IIHP++VA IL +L++D  ++A G LH
Sbjct: 18  QYMGPEHVAFVEKACEYATAAHDGQFRKSGEPYIIHPIQVAGILADLKMDPHTVATGFLH 77

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT + T E + EEFG  V  +V+G   V+KLGK+K K+    +    A++ R+M L
Sbjct: 78  DVVEDTEI-TLEDLREEFGDDVAMLVDG---VTKLGKIKYKSHEEQL----AENHRKMLL 129

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM +++RVI+VKLADRLHNMRTL H+   KQ  IA ETL+++APLA  LG+ +IK ELE+
Sbjct: 130 AMAQDLRVIMVKLADRLHNMRTLKHLREDKQRRIAQETLEIYAPLAHRLGISRIKWELED 189

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQF-LDLMTVKTEIRSVC 377
            +  Y N + Y ++   +       + + EE  K +   +ED +   + + +  EI    
Sbjct: 190 TALRYLNPKQYYRIVHLM-------QTKREEREKYVSGTVEDIRIATEELGIFAEIYGRP 242

Query: 378 KEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWT 437
           K  YSIY+ +   +   NE+  +  +R+I+               + CY VLG +H  W 
Sbjct: 243 KHIYSIYRKMKDQKKQFNEIYDLLAIRVIV------------DSIKDCYAVLGAIHTKWK 290

Query: 438 PIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGR 497
           P+P   KDYIA PK N YQSLHTT+I     +   +E+QIRT+EM  IAE G+AAH++  
Sbjct: 291 PMPGRFKDYIAMPKANMYQSLHTTVIG---PAGNPVEIQIRTQEMHEIAEFGVAAHWA-- 345

Query: 498 VFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTIT 557
            +  G      P+G              +  ++SW + I E Q+E   +  + EF++ + 
Sbjct: 346 -YKEGKNEKVEPDG--------------MTKQLSWFHEILELQDE---SYDASEFMEGVK 387

Query: 558 RDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANA 617
            D+   +V+VFTP+G++  LPKG+  +D+AY IHT+IGNK   AKVNG +V   + L N 
Sbjct: 388 GDIFSDKVYVFTPKGDVTELPKGSGPLDFAYSIHTDIGNKTTGAKVNGKMVQLDYKLKNG 447

Query: 618 EVVEIITYNVSFS 630
           +++EI+T   SF 
Sbjct: 448 DIIEIMTSPNSFG 460


>gi|69247932|ref|ZP_00604548.1| RelA/SpoT protein [Enterococcus faecium DO]
 gi|257880296|ref|ZP_05659949.1| RelA/SpoT protein [Enterococcus faecium 1,230,933]
 gi|257882151|ref|ZP_05661804.1| RelA/SpoT protein [Enterococcus faecium 1,231,502]
 gi|257885343|ref|ZP_05664996.1| RelA/SpoT protein [Enterococcus faecium 1,231,501]
 gi|257890955|ref|ZP_05670608.1| RelA/SpoT protein [Enterococcus faecium 1,231,410]
 gi|257894210|ref|ZP_05673863.1| RelA/SpoT protein [Enterococcus faecium 1,231,408]
 gi|260562400|ref|ZP_05832914.1| RelA/SpoT protein [Enterococcus faecium C68]
 gi|261209225|ref|ZP_05923617.1| RelA/SpoT protein [Enterococcus faecium TC 6]
 gi|289566141|ref|ZP_06446576.1| GTP pyrophosphokinase [Enterococcus faecium D344SRF]
 gi|293556306|ref|ZP_06674891.1| GTP pyrophosphokinase [Enterococcus faecium E1039]
 gi|293560712|ref|ZP_06677191.1| GTP pyrophosphokinase [Enterococcus faecium E1162]
 gi|293566146|ref|ZP_06678549.1| GTP pyrophosphokinase [Enterococcus faecium E1071]
 gi|294614195|ref|ZP_06694115.1| GTP pyrophosphokinase [Enterococcus faecium E1636]
 gi|294622232|ref|ZP_06701292.1| GTP pyrophosphokinase [Enterococcus faecium U0317]
 gi|314940914|ref|ZP_07847820.1| GTP diphosphokinase [Enterococcus faecium TX0133C]
 gi|314948065|ref|ZP_07851467.1| GTP diphosphokinase [Enterococcus faecium TX0082]
 gi|383329817|ref|YP_005355701.1| GTP diphosphokinase [Enterococcus faecium Aus0004]
 gi|389869622|ref|YP_006377045.1| GTP diphosphokinase [Enterococcus faecium DO]
 gi|406579528|ref|ZP_11054758.1| GTP diphosphokinase [Enterococcus sp. GMD4E]
 gi|406581760|ref|ZP_11056896.1| GTP diphosphokinase [Enterococcus sp. GMD3E]
 gi|406583837|ref|ZP_11058876.1| GTP diphosphokinase [Enterococcus sp. GMD2E]
 gi|406590128|ref|ZP_11064525.1| GTP diphosphokinase [Enterococcus sp. GMD1E]
 gi|410936653|ref|ZP_11368517.1| GTP diphosphokinase [Enterococcus sp. GMD5E]
 gi|415888277|ref|ZP_11549092.1| GTP pyrophosphokinase [Enterococcus faecium E4453]
 gi|416130760|ref|ZP_11597546.1| GTP pyrophosphokinase [Enterococcus faecium E4452]
 gi|424779554|ref|ZP_18206474.1| GTP diphosphokinase [Enterococcus faecium V689]
 gi|424795887|ref|ZP_18221693.1| GTP diphosphokinase [Enterococcus faecium S447]
 gi|424819810|ref|ZP_18244850.1| GTP diphosphokinase [Enterococcus faecium R501]
 gi|424853535|ref|ZP_18277909.1| GTP diphosphokinase [Enterococcus faecium R499]
 gi|424869894|ref|ZP_18293570.1| GTP diphosphokinase [Enterococcus faecium R497]
 gi|424938634|ref|ZP_18354408.1| GTP diphosphokinase [Enterococcus faecium R496]
 gi|424952976|ref|ZP_18367967.1| GTP diphosphokinase [Enterococcus faecium R494]
 gi|424956106|ref|ZP_18370901.1| GTP diphosphokinase [Enterococcus faecium R446]
 gi|424959724|ref|ZP_18374290.1| GTP diphosphokinase [Enterococcus faecium P1986]
 gi|424963000|ref|ZP_18377271.1| GTP diphosphokinase [Enterococcus faecium P1190]
 gi|424966612|ref|ZP_18380376.1| GTP diphosphokinase [Enterococcus faecium P1140]
 gi|424969680|ref|ZP_18383237.1| GTP diphosphokinase [Enterococcus faecium P1139]
 gi|424974168|ref|ZP_18387418.1| GTP diphosphokinase [Enterococcus faecium P1137]
 gi|424976523|ref|ZP_18389606.1| GTP diphosphokinase [Enterococcus faecium P1123]
 gi|424979818|ref|ZP_18392650.1| GTP diphosphokinase [Enterococcus faecium ERV99]
 gi|424983299|ref|ZP_18395893.1| GTP diphosphokinase [Enterococcus faecium ERV69]
 gi|424986419|ref|ZP_18398840.1| GTP diphosphokinase [Enterococcus faecium ERV38]
 gi|424989780|ref|ZP_18402034.1| GTP diphosphokinase [Enterococcus faecium ERV26]
 gi|424993982|ref|ZP_18405949.1| GTP diphosphokinase [Enterococcus faecium ERV168]
 gi|424996634|ref|ZP_18408432.1| GTP diphosphokinase [Enterococcus faecium ERV165]
 gi|425000745|ref|ZP_18412295.1| GTP diphosphokinase [Enterococcus faecium ERV161]
 gi|425003498|ref|ZP_18414862.1| GTP diphosphokinase [Enterococcus faecium ERV102]
 gi|425007259|ref|ZP_18418397.1| GTP diphosphokinase [Enterococcus faecium ERV1]
 gi|425010106|ref|ZP_18421078.1| GTP diphosphokinase [Enterococcus faecium E422]
 gi|425013069|ref|ZP_18423816.1| GTP diphosphokinase [Enterococcus faecium E417]
 gi|425017455|ref|ZP_18427958.1| GTP diphosphokinase [Enterococcus faecium C621]
 gi|425020272|ref|ZP_18430589.1| GTP diphosphokinase [Enterococcus faecium C497]
 gi|425022625|ref|ZP_18432796.1| GTP diphosphokinase [Enterococcus faecium C1904]
 gi|425031926|ref|ZP_18437021.1| GTP diphosphokinase [Enterococcus faecium 515]
 gi|425034244|ref|ZP_18439149.1| GTP diphosphokinase [Enterococcus faecium 514]
 gi|425037683|ref|ZP_18442334.1| GTP diphosphokinase [Enterococcus faecium 513]
 gi|425040580|ref|ZP_18445039.1| GTP diphosphokinase [Enterococcus faecium 511]
 gi|425047514|ref|ZP_18451464.1| GTP diphosphokinase [Enterococcus faecium 509]
 gi|425051955|ref|ZP_18455592.1| GTP diphosphokinase [Enterococcus faecium 506]
 gi|425057217|ref|ZP_18460644.1| GTP diphosphokinase [Enterococcus faecium 504]
 gi|425061739|ref|ZP_18464946.1| GTP diphosphokinase [Enterococcus faecium 503]
 gi|427395763|ref|ZP_18888685.1| RelA/SpoT family protein [Enterococcus durans FB129-CNAB-4]
 gi|430820722|ref|ZP_19439345.1| RelA/SpoT family protein [Enterococcus faecium E0045]
 gi|430823660|ref|ZP_19442229.1| RelA/SpoT family protein [Enterococcus faecium E0120]
 gi|430826557|ref|ZP_19444737.1| RelA/SpoT family protein [Enterococcus faecium E0164]
 gi|430829158|ref|ZP_19447255.1| RelA/SpoT family protein [Enterococcus faecium E0269]
 gi|430832404|ref|ZP_19450450.1| RelA/SpoT family protein [Enterococcus faecium E0333]
 gi|430836653|ref|ZP_19454630.1| RelA/SpoT family protein [Enterococcus faecium E0680]
 gi|430839686|ref|ZP_19457624.1| RelA/SpoT family protein [Enterococcus faecium E0688]
 gi|430845201|ref|ZP_19463097.1| RelA/SpoT family protein [Enterococcus faecium E1050]
 gi|430845719|ref|ZP_19463596.1| RelA/SpoT family protein [Enterococcus faecium E1133]
 gi|430850320|ref|ZP_19468082.1| RelA/SpoT family protein [Enterococcus faecium E1185]
 gi|430853864|ref|ZP_19471590.1| RelA/SpoT family protein [Enterococcus faecium E1258]
 gi|430856707|ref|ZP_19474392.1| RelA/SpoT family protein [Enterococcus faecium E1392]
 gi|430859526|ref|ZP_19477137.1| RelA/SpoT family protein [Enterococcus faecium E1552]
 gi|430860918|ref|ZP_19478513.1| RelA/SpoT family protein [Enterococcus faecium E1573]
 gi|430866741|ref|ZP_19481967.1| RelA/SpoT family protein [Enterococcus faecium E1574]
 gi|430902730|ref|ZP_19484857.1| RelA/SpoT family protein [Enterococcus faecium E1575]
 gi|430960575|ref|ZP_19487111.1| RelA/SpoT family protein [Enterococcus faecium E1576]
 gi|431012401|ref|ZP_19490192.1| RelA/SpoT family protein [Enterococcus faecium E1578]
 gi|431217876|ref|ZP_19501297.1| RelA/SpoT family protein [Enterococcus faecium E1620]
 gi|431238716|ref|ZP_19503585.1| RelA/SpoT family protein [Enterococcus faecium E1622]
 gi|431260184|ref|ZP_19505690.1| RelA/SpoT family protein [Enterococcus faecium E1623]
 gi|431305128|ref|ZP_19508495.1| RelA/SpoT family protein [Enterococcus faecium E1626]
 gi|431468375|ref|ZP_19514404.1| RelA/SpoT family protein [Enterococcus faecium E1630]
 gi|431520320|ref|ZP_19516603.1| RelA/SpoT family protein [Enterococcus faecium E1634]
 gi|431548672|ref|ZP_19519144.1| RelA/SpoT family protein [Enterococcus faecium E1731]
 gi|431744430|ref|ZP_19533298.1| RelA/SpoT family protein [Enterococcus faecium E2071]
 gi|431745118|ref|ZP_19533972.1| RelA/SpoT family protein [Enterococcus faecium E2134]
 gi|431749532|ref|ZP_19538271.1| RelA/SpoT family protein [Enterococcus faecium E2297]
 gi|431755466|ref|ZP_19544115.1| RelA/SpoT family protein [Enterococcus faecium E2883]
 gi|431760950|ref|ZP_19549541.1| RelA/SpoT family protein [Enterococcus faecium E3346]
 gi|431765578|ref|ZP_19554088.1| RelA/SpoT family protein [Enterococcus faecium E4215]
 gi|431768374|ref|ZP_19556813.1| RelA/SpoT family protein [Enterococcus faecium E1321]
 gi|431771621|ref|ZP_19560002.1| RelA/SpoT family protein [Enterococcus faecium E1644]
 gi|431773741|ref|ZP_19562058.1| RelA/SpoT family protein [Enterococcus faecium E2369]
 gi|431777486|ref|ZP_19565740.1| RelA/SpoT family protein [Enterococcus faecium E2560]
 gi|431779833|ref|ZP_19568023.1| RelA/SpoT family protein [Enterococcus faecium E4389]
 gi|431783794|ref|ZP_19571884.1| RelA/SpoT family protein [Enterococcus faecium E6012]
 gi|431786298|ref|ZP_19574312.1| RelA/SpoT family protein [Enterococcus faecium E6045]
 gi|68194634|gb|EAN09121.1| RelA/SpoT protein [Enterococcus faecium DO]
 gi|257814524|gb|EEV43282.1| RelA/SpoT protein [Enterococcus faecium 1,230,933]
 gi|257817809|gb|EEV45137.1| RelA/SpoT protein [Enterococcus faecium 1,231,502]
 gi|257821199|gb|EEV48329.1| RelA/SpoT protein [Enterococcus faecium 1,231,501]
 gi|257827315|gb|EEV53941.1| RelA/SpoT protein [Enterococcus faecium 1,231,410]
 gi|257830589|gb|EEV57196.1| RelA/SpoT protein [Enterococcus faecium 1,231,408]
 gi|260073324|gb|EEW61665.1| RelA/SpoT protein [Enterococcus faecium C68]
 gi|260076771|gb|EEW64506.1| RelA/SpoT protein [Enterococcus faecium TC 6]
 gi|289162086|gb|EFD09951.1| GTP pyrophosphokinase [Enterococcus faecium D344SRF]
 gi|291590072|gb|EFF21864.1| GTP pyrophosphokinase [Enterococcus faecium E1071]
 gi|291592971|gb|EFF24560.1| GTP pyrophosphokinase [Enterococcus faecium E1636]
 gi|291598274|gb|EFF29367.1| GTP pyrophosphokinase [Enterococcus faecium U0317]
 gi|291601565|gb|EFF31832.1| GTP pyrophosphokinase [Enterococcus faecium E1039]
 gi|291605303|gb|EFF34758.1| GTP pyrophosphokinase [Enterococcus faecium E1162]
 gi|313600272|gb|EFR79115.1| GTP diphosphokinase [Enterococcus faecium TX0133C]
 gi|313645481|gb|EFS10061.1| GTP diphosphokinase [Enterococcus faecium TX0082]
 gi|364093929|gb|EHM36159.1| GTP pyrophosphokinase [Enterococcus faecium E4452]
 gi|364094941|gb|EHM37052.1| GTP pyrophosphokinase [Enterococcus faecium E4453]
 gi|378939511|gb|AFC64583.1| GTP diphosphokinase [Enterococcus faecium Aus0004]
 gi|388534871|gb|AFK60063.1| GTP diphosphokinase [Enterococcus faecium DO]
 gi|402923904|gb|EJX44154.1| GTP diphosphokinase [Enterococcus faecium S447]
 gi|402925120|gb|EJX45291.1| GTP diphosphokinase [Enterococcus faecium V689]
 gi|402925823|gb|EJX45917.1| GTP diphosphokinase [Enterococcus faecium R501]
 gi|402932657|gb|EJX52146.1| GTP diphosphokinase [Enterococcus faecium R499]
 gi|402935071|gb|EJX54355.1| GTP diphosphokinase [Enterococcus faecium R497]
 gi|402936556|gb|EJX55726.1| GTP diphosphokinase [Enterococcus faecium R496]
 gi|402940183|gb|EJX59039.1| GTP diphosphokinase [Enterococcus faecium R494]
 gi|402946666|gb|EJX64923.1| GTP diphosphokinase [Enterococcus faecium R446]
 gi|402949655|gb|EJX67700.1| GTP diphosphokinase [Enterococcus faecium P1986]
 gi|402950598|gb|EJX68588.1| GTP diphosphokinase [Enterococcus faecium P1190]
 gi|402956167|gb|EJX73641.1| GTP diphosphokinase [Enterococcus faecium P1140]
 gi|402957308|gb|EJX74705.1| GTP diphosphokinase [Enterococcus faecium P1137]
 gi|402963682|gb|EJX80533.1| GTP diphosphokinase [Enterococcus faecium P1139]
 gi|402968072|gb|EJX84574.1| GTP diphosphokinase [Enterococcus faecium ERV99]
 gi|402969316|gb|EJX85739.1| GTP diphosphokinase [Enterococcus faecium P1123]
 gi|402971897|gb|EJX88137.1| GTP diphosphokinase [Enterococcus faecium ERV69]
 gi|402976533|gb|EJX92419.1| GTP diphosphokinase [Enterococcus faecium ERV38]
 gi|402981157|gb|EJX96705.1| GTP diphosphokinase [Enterococcus faecium ERV26]
 gi|402981321|gb|EJX96860.1| GTP diphosphokinase [Enterococcus faecium ERV168]
 gi|402988221|gb|EJY03239.1| GTP diphosphokinase [Enterococcus faecium ERV165]
 gi|402988601|gb|EJY03598.1| GTP diphosphokinase [Enterococcus faecium ERV161]
 gi|402991807|gb|EJY06555.1| GTP diphosphokinase [Enterococcus faecium ERV102]
 gi|402995444|gb|EJY09907.1| GTP diphosphokinase [Enterococcus faecium ERV1]
 gi|403001134|gb|EJY15206.1| GTP diphosphokinase [Enterococcus faecium E422]
 gi|403001881|gb|EJY15900.1| GTP diphosphokinase [Enterococcus faecium E417]
 gi|403004240|gb|EJY18059.1| GTP diphosphokinase [Enterococcus faecium C621]
 gi|403009667|gb|EJY23096.1| GTP diphosphokinase [Enterococcus faecium C497]
 gi|403012474|gb|EJY25699.1| GTP diphosphokinase [Enterococcus faecium C1904]
 gi|403014462|gb|EJY27465.1| GTP diphosphokinase [Enterococcus faecium 515]
 gi|403020940|gb|EJY33429.1| GTP diphosphokinase [Enterococcus faecium 514]
 gi|403021466|gb|EJY33924.1| GTP diphosphokinase [Enterococcus faecium 513]
 gi|403028235|gb|EJY40070.1| GTP diphosphokinase [Enterococcus faecium 511]
 gi|403033499|gb|EJY44999.1| GTP diphosphokinase [Enterococcus faecium 509]
 gi|403036143|gb|EJY47507.1| GTP diphosphokinase [Enterococcus faecium 506]
 gi|403040620|gb|EJY51683.1| GTP diphosphokinase [Enterococcus faecium 503]
 gi|403040883|gb|EJY51930.1| GTP diphosphokinase [Enterococcus faecium 504]
 gi|404455256|gb|EKA02115.1| GTP diphosphokinase [Enterococcus sp. GMD4E]
 gi|404459225|gb|EKA05595.1| GTP diphosphokinase [Enterococcus sp. GMD3E]
 gi|404464985|gb|EKA10494.1| GTP diphosphokinase [Enterococcus sp. GMD2E]
 gi|404469816|gb|EKA14531.1| GTP diphosphokinase [Enterococcus sp. GMD1E]
 gi|410735069|gb|EKQ76986.1| GTP diphosphokinase [Enterococcus sp. GMD5E]
 gi|425723752|gb|EKU86639.1| RelA/SpoT family protein [Enterococcus durans FB129-CNAB-4]
 gi|430439268|gb|ELA49634.1| RelA/SpoT family protein [Enterococcus faecium E0045]
 gi|430441693|gb|ELA51764.1| RelA/SpoT family protein [Enterococcus faecium E0120]
 gi|430444965|gb|ELA54762.1| RelA/SpoT family protein [Enterococcus faecium E0164]
 gi|430480102|gb|ELA57296.1| RelA/SpoT family protein [Enterococcus faecium E0333]
 gi|430481238|gb|ELA58395.1| RelA/SpoT family protein [Enterococcus faecium E0269]
 gi|430487976|gb|ELA64669.1| RelA/SpoT family protein [Enterococcus faecium E0680]
 gi|430490422|gb|ELA66947.1| RelA/SpoT family protein [Enterococcus faecium E0688]
 gi|430496035|gb|ELA72155.1| RelA/SpoT family protein [Enterococcus faecium E1050]
 gi|430535658|gb|ELA76057.1| RelA/SpoT family protein [Enterococcus faecium E1185]
 gi|430540113|gb|ELA80331.1| RelA/SpoT family protein [Enterococcus faecium E1258]
 gi|430540337|gb|ELA80540.1| RelA/SpoT family protein [Enterococcus faecium E1133]
 gi|430543493|gb|ELA83555.1| RelA/SpoT family protein [Enterococcus faecium E1552]
 gi|430544143|gb|ELA84187.1| RelA/SpoT family protein [Enterococcus faecium E1392]
 gi|430550791|gb|ELA90561.1| RelA/SpoT family protein [Enterococcus faecium E1574]
 gi|430551236|gb|ELA91005.1| RelA/SpoT family protein [Enterococcus faecium E1573]
 gi|430554665|gb|ELA94250.1| RelA/SpoT family protein [Enterococcus faecium E1575]
 gi|430556084|gb|ELA95600.1| RelA/SpoT family protein [Enterococcus faecium E1576]
 gi|430559912|gb|ELA99236.1| RelA/SpoT family protein [Enterococcus faecium E1578]
 gi|430569791|gb|ELB08777.1| RelA/SpoT family protein [Enterococcus faecium E1620]
 gi|430572417|gb|ELB11279.1| RelA/SpoT family protein [Enterococcus faecium E1622]
 gi|430576923|gb|ELB15548.1| RelA/SpoT family protein [Enterococcus faecium E1623]
 gi|430579335|gb|ELB17844.1| RelA/SpoT family protein [Enterococcus faecium E1626]
 gi|430584052|gb|ELB22403.1| RelA/SpoT family protein [Enterococcus faecium E1630]
 gi|430585200|gb|ELB23495.1| RelA/SpoT family protein [Enterococcus faecium E1634]
 gi|430590980|gb|ELB29025.1| RelA/SpoT family protein [Enterococcus faecium E1731]
 gi|430605173|gb|ELB42578.1| RelA/SpoT family protein [Enterococcus faecium E2071]
 gi|430611172|gb|ELB48282.1| RelA/SpoT family protein [Enterococcus faecium E2134]
 gi|430611446|gb|ELB48536.1| RelA/SpoT family protein [Enterococcus faecium E2297]
 gi|430616688|gb|ELB53583.1| RelA/SpoT family protein [Enterococcus faecium E2883]
 gi|430623229|gb|ELB59929.1| RelA/SpoT family protein [Enterococcus faecium E3346]
 gi|430628052|gb|ELB64509.1| RelA/SpoT family protein [Enterococcus faecium E4215]
 gi|430629449|gb|ELB65850.1| RelA/SpoT family protein [Enterococcus faecium E1321]
 gi|430633038|gb|ELB69221.1| RelA/SpoT family protein [Enterococcus faecium E1644]
 gi|430635627|gb|ELB71720.1| RelA/SpoT family protein [Enterococcus faecium E2369]
 gi|430639598|gb|ELB75471.1| RelA/SpoT family protein [Enterococcus faecium E2560]
 gi|430641221|gb|ELB77034.1| RelA/SpoT family protein [Enterococcus faecium E4389]
 gi|430644484|gb|ELB80099.1| RelA/SpoT family protein [Enterococcus faecium E6012]
 gi|430645783|gb|ELB81286.1| RelA/SpoT family protein [Enterococcus faecium E6045]
          Length = 737

 Score =  339 bits (869), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 194/493 (39%), Positives = 288/493 (58%), Gaps = 51/493 (10%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
            Y+ P  +  V +A   A  AHDGQ R+SGEP+IIHP++VA IL +L++D  ++A G LH
Sbjct: 18  QYMGPEHVAFVEKACEYATAAHDGQFRKSGEPYIIHPIQVAGILADLKMDPHTVATGFLH 77

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT + T E + EEFG  V  +V+G   V+KLGK+K K+    +    A++ R+M L
Sbjct: 78  DVVEDTEI-TLEDLREEFGDDVAMLVDG---VTKLGKIKYKSHEEQL----AENHRKMLL 129

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM +++RVI+VKLADRLHNMRTL H+   KQ  IA ETL+++APLA  LG+ +IK ELE+
Sbjct: 130 AMAQDLRVIMVKLADRLHNMRTLKHLREDKQRRIAQETLEIYAPLAHRLGISRIKWELED 189

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQF-LDLMTVKTEIRSVC 377
            +  Y N + Y ++   +       + + EE  K +   +ED +   + + +  EI    
Sbjct: 190 TALRYLNPKQYYRIVHLM-------QTKREEREKYVSGTVEDIRIATEELGIFAEIYGRP 242

Query: 378 KEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWT 437
           K  YSIY+ +   +   NE+  +  +R+I+               + CY VLG +H  W 
Sbjct: 243 KHIYSIYRKMKDQKKQFNEIYDLLAIRVIV------------DSIKDCYAVLGAIHTKWK 290

Query: 438 PIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGR 497
           P+P   KDYIA PK N YQSLHTT+I     +   +E+QIRT+EM  IAE G+AAH++  
Sbjct: 291 PMPGRFKDYIAMPKANMYQSLHTTVIG---PAGNPVEIQIRTQEMHEIAEFGVAAHWA-- 345

Query: 498 VFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTIT 557
            +  G      P+G              +  ++SW + I E Q+E   +  + EF++ + 
Sbjct: 346 -YKEGKNEKVEPDG--------------MTKQLSWFHEILELQDE---SYDASEFMEGVK 387

Query: 558 RDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANA 617
            D+   +V+VFTP+G++  LPKG+  +D+AY IHT+IGNK   AKVNG +V   + L N 
Sbjct: 388 GDIFSDKVYVFTPKGDVTELPKGSGPLDFAYSIHTDIGNKTTGAKVNGKMVQLDYKLKNG 447

Query: 618 EVVEIITYNVSFS 630
           +++EI+T   SF 
Sbjct: 448 DIIEIMTSPNSFG 460


>gi|227552630|ref|ZP_03982679.1| GTP diphosphokinase [Enterococcus faecium TX1330]
 gi|257888143|ref|ZP_05667796.1| GTP pyrophosphokinase [Enterococcus faecium 1,141,733]
 gi|293378678|ref|ZP_06624837.1| GTP diphosphokinase [Enterococcus faecium PC4.1]
 gi|424764268|ref|ZP_18191711.1| GTP diphosphokinase [Enterococcus faecium TX1337RF]
 gi|431040301|ref|ZP_19492808.1| RelA/SpoT family protein [Enterococcus faecium E1590]
 gi|431750927|ref|ZP_19539621.1| RelA/SpoT family protein [Enterococcus faecium E2620]
 gi|431758269|ref|ZP_19546897.1| RelA/SpoT family protein [Enterococcus faecium E3083]
 gi|431763734|ref|ZP_19552283.1| RelA/SpoT family protein [Enterococcus faecium E3548]
 gi|227178256|gb|EEI59228.1| GTP diphosphokinase [Enterococcus faecium TX1330]
 gi|257824197|gb|EEV51129.1| GTP pyrophosphokinase [Enterococcus faecium 1,141,733]
 gi|292642718|gb|EFF60869.1| GTP diphosphokinase [Enterococcus faecium PC4.1]
 gi|402419837|gb|EJV52110.1| GTP diphosphokinase [Enterococcus faecium TX1337RF]
 gi|430562153|gb|ELB01406.1| RelA/SpoT family protein [Enterococcus faecium E1590]
 gi|430616185|gb|ELB53109.1| RelA/SpoT family protein [Enterococcus faecium E2620]
 gi|430617932|gb|ELB54796.1| RelA/SpoT family protein [Enterococcus faecium E3083]
 gi|430622107|gb|ELB58848.1| RelA/SpoT family protein [Enterococcus faecium E3548]
          Length = 786

 Score =  339 bits (869), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 195/493 (39%), Positives = 288/493 (58%), Gaps = 51/493 (10%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
            Y+ P  +  V +A   A  AHDGQ R+SGEP+IIHP++VA IL +L++D  ++A G LH
Sbjct: 67  QYMGPEHVAFVEKACEYATAAHDGQFRKSGEPYIIHPIQVAGILADLKMDPHTVATGFLH 126

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT V T E + EEFG  V  +V+G   V+KLGK+K K+    +    A++ R+M L
Sbjct: 127 DVVEDTEV-TLEDLREEFGDDVAMLVDG---VTKLGKIKYKSHEEQL----AENHRKMLL 178

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM +++RVI+VKLADRLHNMRTL H+   KQ  IA ETL+++APLA  LG+ +IK ELE+
Sbjct: 179 AMAQDLRVIMVKLADRLHNMRTLKHLREDKQRRIAQETLEIYAPLAHRLGISRIKWELED 238

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQF-LDLMTVKTEIRSVC 377
            +  Y N + Y ++   +       + + EE  K +   +ED +   + + +  EI    
Sbjct: 239 TALRYLNPKQYYRIVHLM-------QTKREEREKYVNGTVEDIRVATEELGIFAEIYGRP 291

Query: 378 KEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWT 437
           K  YSIY+ +   +   NE+  +  +R+I+               + CY VLG +H  W 
Sbjct: 292 KHIYSIYRKMKDQKKQFNEIYDLLAIRVIV------------DSIKDCYAVLGAIHTKWK 339

Query: 438 PIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGR 497
           P+P   KDYIA PK N YQSLHTT+I     +   +E+QIRT+EM  IAE G+AAH++  
Sbjct: 340 PMPGRFKDYIAMPKANMYQSLHTTVIG---PAGNPVEIQIRTQEMHEIAEFGVAAHWA-- 394

Query: 498 VFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTIT 557
            +  G      P+G              +  ++SW + I E Q+E   +  + EF++ + 
Sbjct: 395 -YKEGKNEKVEPDG--------------MTKQLSWFHEILELQDE---SYDASEFMEGVK 436

Query: 558 RDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANA 617
            D+   +V+VFTP+G++  LPKG+  +D+AY IHT+IGNK   AKVNG +V   + L N 
Sbjct: 437 GDIFSDKVYVFTPKGDVTELPKGSGPLDFAYSIHTDIGNKTTGAKVNGKMVQLDYKLKNG 496

Query: 618 EVVEIITYNVSFS 630
           +++EI+T   SF 
Sbjct: 497 DIIEIMTSPNSFG 509


>gi|258645309|ref|ZP_05732778.1| GTP diphosphokinase [Dialister invisus DSM 15470]
 gi|260402658|gb|EEW96205.1| GTP diphosphokinase [Dialister invisus DSM 15470]
          Length = 792

 Score =  339 bits (869), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 195/496 (39%), Positives = 282/496 (56%), Gaps = 54/496 (10%)

Query: 129 RLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
           +L E L+  I       +E +R A  +A +AH+GQ R +GEP+IIHP+ VA IL ELE+D
Sbjct: 70  KLMEKLKTYIH--ETQSMETIRHAFEIAQKAHEGQIRATGEPYIIHPLAVAYILAELEID 127

Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
            + I A LLHD VEDT   T E I   FG  V  IV+G   ++KL +   K++    +D 
Sbjct: 128 AQGIIAALLHDVVEDT-AYTLEDIRRIFGDEVAFIVDG---ITKLSQFHYKDK----EDQ 179

Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
           + ++ R+MFLAM +++RV+++KLADRLHNMRTL      KQ  IA ET++++APLA  LG
Sbjct: 180 QTENFRKMFLAMAQDIRVVVIKLADRLHNMRTLGIFRREKQIRIAKETMEIYAPLAHRLG 239

Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
           +Y IK ELE+L F Y + E+Y  + R++    K  E+ + +  ++L + I D        
Sbjct: 240 IYNIKWELEDLCFHYLHTEEYYDLVRQMRQKRKAREEIVNDTMEVLHQSIND------AG 293

Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
           +K  I    K  YSIYK + +    ++++  +  +R+I+   P             CY V
Sbjct: 294 IKATITGRPKHFYSIYKKMKRDNKDLSQIYDLYAVRVIVNTIPQ------------CYAV 341

Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAER 488
           LG+ H +W P+P   KDYIA PKPN YQSLHTT+I    +    +E+QIRT EM  I+E 
Sbjct: 342 LGIAHSLWKPLPNRFKDYIAVPKPNMYQSLHTTVIGTKGQP---VEIQIRTWEMHHISEY 398

Query: 489 GIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMT 548
           G+AAH+                 R   G        +   +ISWL  + EWQ+       
Sbjct: 399 GVAAHW-----------------RYKEGNKA--GTKDFDQKISWLRRLLEWQD----TSN 435

Query: 549 SREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLV 608
           S+EF++ +  D+    VFVFTP+G++ NLPKG+  +D+AY IHTE+GN  V AKVN  +V
Sbjct: 436 SKEFLNALKLDVFSDEVFVFTPKGDVINLPKGSIPIDFAYRIHTEVGNHCVGAKVNNKIV 495

Query: 609 SPTHVLANAEVVEIIT 624
                L N ++V +IT
Sbjct: 496 PLDTKLKNGDIVSVIT 511


>gi|296187176|ref|ZP_06855573.1| GTP diphosphokinase [Clostridium carboxidivorans P7]
 gi|296048211|gb|EFG87648.1| GTP diphosphokinase [Clostridium carboxidivorans P7]
          Length = 724

 Score =  338 bits (868), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 198/482 (41%), Positives = 284/482 (58%), Gaps = 62/482 (12%)

Query: 147 ELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNV 206
           ++V +A  LA EAH  QKR SGEP+I+HPVEVA IL E+ +D  +I AGLLHD +EDT  
Sbjct: 19  KMVEKAYNLADEAHKQQKRESGEPYIMHPVEVACILAEMGMDTSTITAGLLHDVIEDTEY 78

Query: 207 VTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRV 266
            T+E I  EF   V  +V+G   V+KLGK++ K +    ++ +AD++R+M LAM +++RV
Sbjct: 79  -TYEDICSEFSVEVANLVDG---VTKLGKIQYKTK----EEQQADNVRKMLLAMAKDIRV 130

Query: 267 IIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNA 326
           I++KLADR+HNMRTL +MP  KQ   A ET  ++APLA  LGM +IK ELE+L+F Y N 
Sbjct: 131 ILIKLADRMHNMRTLKYMPVEKQKEKAKETFDIYAPLAHRLGMSKIKWELEDLAFRYINP 190

Query: 327 EDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKA 386
            +Y  + R++++  +E E+ + E    +++++E++  LD   + +EI    K  YSIY+ 
Sbjct: 191 NEYYFIVRKISEKREEREEYIGE----VIQQLENN--LDRAGISSEIDGRPKHFYSIYRK 244

Query: 387 VLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDY 446
           ++    +I+++  +  +RI            L    + CY  LG+VH I+ PIP   KDY
Sbjct: 245 MVNKNKTIDQIFDLTAVRI------------LVETVKDCYAALGIVHTIYKPIPGRFKDY 292

Query: 447 IATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVT 501
           IA PKPN YQSLH+T+I     PF        E+QIRT  M   AE GIAAH+  +  V 
Sbjct: 293 IAMPKPNMYQSLHSTVIGPQGKPF--------EIQIRTFAMHKTAEYGIAAHWKYKEGVE 344

Query: 502 GLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLL 561
                                  +I  +++WL  I EWQ E      + EF++    DL 
Sbjct: 345 --------------------TADDIDKKLTWLREILEWQRE---TSDAEEFMEGFKIDLF 381

Query: 562 GSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVE 621
              VFVFTP+G + NLP  AT +D+AY IHT+IGN+   AKV+G +V   + L   E+VE
Sbjct: 382 SDEVFVFTPKGTVINLPYEATPIDFAYKIHTDIGNRCTGAKVSGKMVPLDYHLKTGEIVE 441

Query: 622 II 623
           II
Sbjct: 442 II 443


>gi|255526671|ref|ZP_05393576.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium carboxidivorans P7]
 gi|255509651|gb|EET85986.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium carboxidivorans P7]
          Length = 724

 Score =  338 bits (868), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 198/482 (41%), Positives = 284/482 (58%), Gaps = 62/482 (12%)

Query: 147 ELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNV 206
           ++V +A  LA EAH  QKR SGEP+I+HPVEVA IL E+ +D  +I AGLLHD +EDT  
Sbjct: 19  KMVEKAYNLADEAHKQQKRESGEPYIMHPVEVACILAEMGMDTSTITAGLLHDVIEDTEY 78

Query: 207 VTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRV 266
            T+E I  EF   V  +V+G   V+KLGK++ K +    ++ +AD++R+M LAM +++RV
Sbjct: 79  -TYEDICSEFSVEVANLVDG---VTKLGKIQYKTK----EEQQADNVRKMLLAMAKDIRV 130

Query: 267 IIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNA 326
           I++KLADR+HNMRTL +MP  KQ   A ET  ++APLA  LGM +IK ELE+L+F Y N 
Sbjct: 131 ILIKLADRMHNMRTLKYMPVEKQKEKAKETFDIYAPLAHRLGMSKIKWELEDLAFRYINP 190

Query: 327 EDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKA 386
            +Y  + R++++  +E E+ + E    +++++E++  LD   + +EI    K  YSIY+ 
Sbjct: 191 NEYYFIVRKISEKREEREEYIGE----VIQQLENN--LDRAGISSEIDGRPKHFYSIYRK 244

Query: 387 VLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDY 446
           ++    +I+++  +  +RI            L    + CY  LG+VH I+ PIP   KDY
Sbjct: 245 MVNKNKTIDQIFDLTAVRI------------LVETVKDCYAALGIVHTIYKPIPGRFKDY 292

Query: 447 IATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVT 501
           IA PKPN YQSLH+T+I     PF        E+QIRT  M   AE GIAAH+  +  V 
Sbjct: 293 IAMPKPNMYQSLHSTVIGPQGKPF--------EIQIRTFAMHKTAEYGIAAHWKYKEGVE 344

Query: 502 GLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLL 561
                                  +I  +++WL  I EWQ E      + EF++    DL 
Sbjct: 345 --------------------TADDIDKKLTWLREILEWQRE---TSDAEEFMEGFKIDLF 381

Query: 562 GSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVE 621
              VFVFTP+G + NLP  AT +D+AY IHT+IGN+   AKV+G +V   + L   E+VE
Sbjct: 382 SDEVFVFTPKGTVINLPYEATPIDFAYKIHTDIGNRCTGAKVSGKMVPLDYHLKTGEIVE 441

Query: 622 II 623
           II
Sbjct: 442 II 443


>gi|428313851|ref|YP_007124828.1| RelA/SpoT family (p)ppGpp synthetase [Microcoleus sp. PCC 7113]
 gi|428255463|gb|AFZ21422.1| (p)ppGpp synthetase, RelA/SpoT family [Microcoleus sp. PCC 7113]
          Length = 751

 Score =  338 bits (868), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 205/510 (40%), Positives = 291/510 (57%), Gaps = 50/510 (9%)

Query: 118 SSDAFKEDSPERLWEDLRPTISYLS---PNELELVRRALMLAFEAHDGQKRRSGEPFIIH 174
           ++  F  D PE L E +  T +  +   P+++ L+ RA   A++ H+GQ R SGEP+I H
Sbjct: 6   TTSRFNFDVPEWLQECILATSAAANEPVPDDINLISRAFEFAYKLHEGQLRASGEPYIAH 65

Query: 175 PVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLG 234
           PV VA +L +L      IAAG LHD VEDT+V T E IE  FG  VRR+VEG TK+SK  
Sbjct: 66  PVAVAGLLRDLGGSSVMIAAGFLHDVVEDTDV-TPEEIESRFGVEVRRLVEGVTKLSKF- 123

Query: 235 KLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIAT 294
               K E       +A++ R+MFLAM  ++RVI+VKLADRLHNMRTL H+ P KQ SI+ 
Sbjct: 124 NFSSKTER------QAENFRRMFLAMAADIRVIVVKLADRLHNMRTLEHLNPQKQRSISQ 177

Query: 295 ETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKIL 354
           ET ++FAPLA  LG+ ++K ELE+L+F Y   E Y ++++ VA+   + E  L +   IL
Sbjct: 178 ETREIFAPLANRLGIGRVKWELEDLAFKYLEPESYRQMQQLVAERRTDRETRLSKVGDIL 237

Query: 355 MKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSG 414
            +++E  +   L     EI    K  Y IY+ + + +   +E+  +A +R+I++ K    
Sbjct: 238 RERLESTEIHCL-----EISGRPKHLYGIYQKMQRQQKGFHEIYDLAAMRLILQTK---- 288

Query: 415 VGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLE 474
                   + CY  L +VH  + PIP   KDYI  PKPN YQSLHT +   +  S   +E
Sbjct: 289 --------EDCYRALAIVHDAFRPIPGRFKDYIGLPKPNRYQSLHTGV---MGPSGRPIE 337

Query: 475 VQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLN 534
           VQIRT EM  IAE GIAAH+             + +G S   +    +      + +WL 
Sbjct: 338 VQIRTLEMHHIAEYGIAAHWK-----------YKESGGSSNNRISAEDE-----KFTWLR 381

Query: 535 AIREWQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEI 594
            + EWQ +      ++E++DTI  +L    V+VFTP G++  L +GAT VD+AY IH+E+
Sbjct: 382 QLLEWQNDL---KDAQEYMDTIKDNLFDDDVYVFTPNGDVIPLSRGATPVDFAYRIHSEV 438

Query: 595 GNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
           GN    A+VNG        L N ++VEIIT
Sbjct: 439 GNHCAGARVNGRWTVLDTPLNNGDIVEIIT 468


>gi|355673973|ref|ZP_09059325.1| hypothetical protein HMPREF9469_02362 [Clostridium citroniae
           WAL-17108]
 gi|354814096|gb|EHE98697.1| hypothetical protein HMPREF9469_02362 [Clostridium citroniae
           WAL-17108]
          Length = 761

 Score =  338 bits (868), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 202/509 (39%), Positives = 301/509 (59%), Gaps = 65/509 (12%)

Query: 126 SPERLWEDLRPTISYLSP-NELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
           SPE L+ DL  TI    P +++ ++++A  +A EAH  Q+R+SGEP+IIHP+ VA IL +
Sbjct: 22  SPEELYLDLIKTIRKYHPSDDITMIQKAYKIADEAHKEQRRKSGEPYIIHPLCVAIILAD 81

Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
           LE+D E+IAAGLLHD VEDT ++T +++ +EFG+ V  +V+G TK+++L   K K E   
Sbjct: 82  LEMDKETIAAGLLHDVVEDT-IMTLDQLTKEFGSEVSFLVDGVTKLTQLNWDKDKVE--- 137

Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
              ++AD+LR+MFLAM +++RVII+KLADRLHNMRT  +  P KQ   A ET++++AP+A
Sbjct: 138 ---IQADNLRKMFLAMAKDIRVIIIKLADRLHNMRTGQYWKPEKQKEKARETMEIYAPIA 194

Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDD--Q 362
             LG+ +IK EL++LS  +   E Y  +  +V DL K       +A +  +++I D+   
Sbjct: 195 DRLGISKIKIELDDLSLKFLKPEVYYDLVEKV-DLRK-------DARETFVQEIVDEVKS 246

Query: 363 FLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQ 422
            +    V+  +    K  +SIYK ++    +++++  +  +RI+++              
Sbjct: 247 HMKEAGVEATVGGRVKHFFSIYKKMVNQNKTLDQIYDLFAVRIMVE------------TV 294

Query: 423 QICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQI 477
           + CY  LG++H ++ PIP   KDYIA PK N YQSLHTTLI     PF        E+QI
Sbjct: 295 KDCYAALGVIHEMYKPIPGRFKDYIAMPKQNMYQSLHTTLIGGNGQPF--------EIQI 346

Query: 478 RTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIR 537
           RT EM   AE GIAAH+  +   +G V                        ++SWL  I 
Sbjct: 347 RTYEMHRTAEYGIAAHWKYKESGSGQVQAGSEEA-----------------KLSWLRQIL 389

Query: 538 EWQEEFVGNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIG 595
           EWQ +      S+EF+  +    DL    V+ FTP G++K LP G+T +D+AY IH+ +G
Sbjct: 390 EWQRD---TDDSKEFLSMVKGDLDLFSDSVYCFTPSGDVKTLPSGSTPIDFAYCIHSAVG 446

Query: 596 NKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
           NKMV A+VNG LV   +V+ N + +EIIT
Sbjct: 447 NKMVGARVNGKLVPIEYVIQNGDQLEIIT 475


>gi|342218775|ref|ZP_08711379.1| GTP diphosphokinase [Megasphaera sp. UPII 135-E]
 gi|341588903|gb|EGS32275.1| GTP diphosphokinase [Megasphaera sp. UPII 135-E]
          Length = 737

 Score =  338 bits (868), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 197/502 (39%), Positives = 289/502 (57%), Gaps = 52/502 (10%)

Query: 124 EDSPERLWEDLRPTISYLSPNELE-LVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARIL 182
           E + E  ++ L  TI    P+  E ++ +A +LA +AH  Q+R SGE +I+HP+ VA+IL
Sbjct: 8   EGTVEEKFQYLLATIRKYQPDLSEDILTKAFILAADAHKTQRRVSGELYIVHPLAVAQIL 67

Query: 183 GELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNEN 242
            ++++D  +I A LLHD VEDT   T E IEE FG  V  +V+G TK+++L       + 
Sbjct: 68  ADMKIDATTITASLLHDVVEDTKY-TLEEIEERFGKEVAFLVDGVTKLNRL-------DY 119

Query: 243 HSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAP 302
            + +D + + LR+MFLAM +++RV+++KLADRLHNMRTL +M   KQ  I+ ETL++FAP
Sbjct: 120 RTKEDQQLNSLRKMFLAMAKDIRVVVIKLADRLHNMRTLRYMRSDKQKRISQETLEIFAP 179

Query: 303 LAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQ 362
           LA  LG++ IK ELE+LSF Y   + Y  +  ++       E+ + +A  +L K + D  
Sbjct: 180 LAHRLGIFNIKWELEDLSFRYLEPDKYYDLVDQMKQKRHAREEIVNDAITVLQKALADSH 239

Query: 363 FLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQ 422
                 +  EI    K  YSIYK + K    +++V  +  +RII+               
Sbjct: 240 ------ISFEINGRPKHLYSIYKKMKKDNRDLSQVYDLYAIRIIV------------DTV 281

Query: 423 QICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEM 482
           Q CY VLG+VH +W P+P   KDYIA PKPN YQSLHTT+I    +    +E+QIRT EM
Sbjct: 282 QDCYGVLGIVHSLWKPLPYRFKDYIAMPKPNNYQSLHTTVIGSQGQP---VEIQIRTWEM 338

Query: 483 DLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEE 542
             +AE G+AAH+  +       GHA         K            + WL  + EWQ+ 
Sbjct: 339 HHVAEYGVAAHWRYK------EGHANAGANEFDEK------------MGWLRNLLEWQD- 379

Query: 543 FVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAK 602
                  REF++ +  D     VFVFTP+G++ +LP+GA  +D+AY IHT++G+  V AK
Sbjct: 380 ---TSNPREFMNALKLDAFSDEVFVFTPQGDVIDLPQGAIPIDFAYRIHTDVGHHCVGAK 436

Query: 603 VNGNLVSPTHVLANAEVVEIIT 624
           +NG +V   + L N ++VEIIT
Sbjct: 437 INGKIVPLDYSLKNGDIVEIIT 458


>gi|187778360|ref|ZP_02994833.1| hypothetical protein CLOSPO_01952 [Clostridium sporogenes ATCC
           15579]
 gi|187771985|gb|EDU35787.1| RelA/SpoT family protein [Clostridium sporogenes ATCC 15579]
          Length = 723

 Score =  338 bits (868), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 201/501 (40%), Positives = 288/501 (57%), Gaps = 63/501 (12%)

Query: 130 LWEDLRPTI-SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
           + EDL   I    S  E+E +++A   A  AH  QKR SGEP+I HP EVA IL E+ +D
Sbjct: 1   MLEDLMIKIKDSFSEKEIEFIKKAYNFACNAHKEQKRISGEPYITHPEEVAIILFEMGMD 60

Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
             ++ AGL+HD VEDT   T+E + +EFG  V  +V G   V+KLGK++ K +    ++ 
Sbjct: 61  VNTMIAGLMHDVVEDTQY-TYEDVAKEFGNEVADLVNG---VTKLGKIEYKTK----EEQ 112

Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
           +AD++R+M LAMT+++RVI++KLADRLHNMRTL  MP  KQ   A ETL ++APLA  LG
Sbjct: 113 QADNVRKMLLAMTKDIRVILIKLADRLHNMRTLRFMPVEKQKEKAQETLDIYAPLAHRLG 172

Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
           + +IK ELE+LSF Y N  +Y  + R++A+   E E+ ++E    L       Q L    
Sbjct: 173 ISKIKWELEDLSFRYINPNEYYFLVRKIAEKRAEREEHIKEIVSNLQ------QNLKKAG 226

Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
           +++EI    K  YSIYK +     +++++  +  +RI            L    + CY  
Sbjct: 227 IESEIDGRPKHFYSIYKKMHNKNKNLDQIFDLTAVRI------------LVDTVKDCYAA 274

Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMD 483
           LG+ H ++ PIP   KDYIA PKPN YQSLH+T++     PF        E+QIRT EM 
Sbjct: 275 LGIAHTVYKPIPGRFKDYIAMPKPNMYQSLHSTVMGVGGRPF--------EIQIRTYEMH 326

Query: 484 LIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEF 543
             AE GIAAH+                    + K    N+ NI L+++WL  + +WQ+E 
Sbjct: 327 KTAEYGIAAHW--------------------KYKEAVENSNNIDLKLTWLREMLDWQKE- 365

Query: 544 VGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKV 603
                  EF+     DL    VFVFTP+G++ +LP  AT VD+AY IHT+IG++ + AKV
Sbjct: 366 --TTDPEEFMQGFKIDLFSDEVFVFTPKGKVISLPNRATPVDFAYKIHTDIGHRCIGAKV 423

Query: 604 NGNLVSPTHVLANAEVVEIIT 624
           NG +V   + L   E++E++T
Sbjct: 424 NGKMVPLDYELKTGEIIEVLT 444


>gi|390956366|ref|YP_006420123.1| RelA/SpoT family (p)ppGpp synthetase [Terriglobus roseus DSM 18391]
 gi|390411284|gb|AFL86788.1| (p)ppGpp synthetase, RelA/SpoT family [Terriglobus roseus DSM
           18391]
          Length = 876

 Score =  338 bits (868), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 194/483 (40%), Positives = 285/483 (59%), Gaps = 50/483 (10%)

Query: 144 NELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVED 203
           ++L++VR A       H+GQKR SGEP+IIHP+EV ++L E+++D  +IAAGLLHD VED
Sbjct: 136 DDLDIVRAAWQFCMAQHEGQKRASGEPYIIHPLEVGQVLAEMKMDSTAIAAGLLHDAVED 195

Query: 204 TNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEE 263
           T V T E I   FG  V  IV+G   V+KL ++K  N+    +D +A+++R+M LAM  +
Sbjct: 196 TPVST-EEISRRFGPQVAHIVDG---VTKLDRIKFANK----EDHQAENIRKMLLAMVSD 247

Query: 264 VRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMY 323
           +RV+++K+ADRLHNMRTL H+ P KQ  IA ETL ++APLA  LGM +++ E E+L+F Y
Sbjct: 248 IRVVLIKMADRLHNMRTLGHLKPEKQQRIARETLDIYAPLAHRLGMGKLRGEFEDLAFQY 307

Query: 324 TNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSI 383
            +   + K+ + V +L +    E    N +   ++E    L    +   +    K  YSI
Sbjct: 308 VDPARFLKLAQDV-ELVRNRGGEEFLDNIVARFQLE----LTRHGLPGRVEYRIKRLYSI 362

Query: 384 YKAVL--KSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPR 441
            + ++   ++G  ++++Q+  L           V  +    Q CY +LGL+H IW P+P 
Sbjct: 363 NQKLVADAAQGGDDDISQVHDL---------FAVRVITQTVQDCYAILGLLHSIWRPVPG 413

Query: 442 AMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVT 501
            +KD+IA P+PN YQSLHTTL+    E  ++ EVQIRTEEM  IAE GIAAH+  +    
Sbjct: 414 RIKDFIAMPRPNLYQSLHTTLV---AEGGYQFEVQIRTEEMHRIAEDGIAAHWKYKA--- 467

Query: 502 GLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLL 561
                          ++V   NA    R++W+  + EWQ E        EF+ T+  DL 
Sbjct: 468 --------------NESV---NAKDEQRLAWVRQLMEWQREMT---DPNEFMSTLKIDLY 507

Query: 562 GSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVE 621
              V+ FTP+G++  LPK A+ +D+AY IHTE+G+  V AKVNG +V   H L N ++VE
Sbjct: 508 PEEVYTFTPKGKVVVLPKDASPIDFAYTIHTEVGHSTVGAKVNGRIVPLRHRLRNGDIVE 567

Query: 622 IIT 624
           I T
Sbjct: 568 ITT 570


>gi|450077103|ref|ZP_21850203.1| putative stringent response protein [Streptococcus mutans N3209]
 gi|449211514|gb|EMC11915.1| putative stringent response protein [Streptococcus mutans N3209]
          Length = 740

 Score =  338 bits (868), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 190/491 (38%), Positives = 291/491 (59%), Gaps = 49/491 (9%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++  ++  V++AL  A E H GQ R+SGEP+IIHP++VA IL +L LD  +++ G LHD
Sbjct: 19  YMNKADIAFVQKALDYATECHSGQFRKSGEPYIIHPIQVAGILADLHLDAITVSCGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            +EDT   T + +E +FG+ V+ IV+G   V+KLGK++ K+    +    A++ R+M +A
Sbjct: 79  VIEDTEA-TLDHLEAKFGSDVKNIVDG---VTKLGKVEYKSHEEQL----AENHRKMLMA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M++++RVI+VKLADRLHNMRTLSH+   KQ  I+ ET++++APLA  LG+ +IK ELE+L
Sbjct: 131 MSKDIRVILVKLADRLHNMRTLSHLRKDKQERISRETMEIYAPLAHRLGISRIKWELEDL 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           +F Y N  ++ K    ++ L  E  +E E     ++ KI+   + +   +  EI    K 
Sbjct: 191 AFRYLNEVEFYK----ISHLMNEKRREREALVDDIVDKIK--AYTEEQGLHGEIYGRPKH 244

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIY+ +   +   +++  +  +R I+            + Q   Y +LG +H +W P+
Sbjct: 245 IYSIYRKMRDKKKRFDQIYDLIAIRCIL------------NTQSDVYAMLGYIHELWRPM 292

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK NGYQS+HTT    +Y     +EVQIRT EM  +AE G+AAH++ +  
Sbjct: 293 PGRFKDYIANPKANGYQSIHTT----VYGPKGPIEVQIRTHEMHQVAEYGVAAHWAYKKG 348

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
           + G V                 N+   AL ++W+  + E Q+   GN    +FVD++  D
Sbjct: 349 IKGKV-----------------NSQESALGMNWIKELVELQDASNGNAV--DFVDSVKED 389

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           +   R++VFTP G ++ LPK +  +D+AY IHT++G K   AKVNG +V  T  L   +V
Sbjct: 390 IFAERIYVFTPNGAVQELPKDSGPIDFAYAIHTQVGEKATGAKVNGRMVPLTAKLKTGDV 449

Query: 620 VEIITYNVSFS 630
           VEIIT + SF 
Sbjct: 450 VEIITNSNSFG 460


>gi|386336903|ref|YP_006033072.1| GTP pyrophosphokinase [Streptococcus gallolyticus subsp.
           gallolyticus ATCC 43143]
 gi|334279539|dbj|BAK27113.1| GTP pyrophosphokinase [Streptococcus gallolyticus subsp.
           gallolyticus ATCC 43143]
          Length = 739

 Score =  338 bits (868), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 192/494 (38%), Positives = 299/494 (60%), Gaps = 49/494 (9%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  Y+S +++ +V++AL  A +AH  Q R+SGEP+IIHP++VA IL +L LD  ++A G 
Sbjct: 16  TAQYMSESDVAIVQKALDYATKAHISQVRQSGEPYIIHPIQVAGILADLHLDVVTVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT V T + IE EFG  VR IV+G   V+KLGK++ K+    +    A++ R+M
Sbjct: 76  LHDVVEDTEV-TLDDIEAEFGKDVRDIVDG---VTKLGKVEYKSHEEQL----AENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM++++RVI+VKLADRLHNMRTL H+   KQ  I+ ET++++APLA  LG+ +IK EL
Sbjct: 128 LMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y N  ++ K+   + +  +E E  ++E    ++KKI+D  +     +  E+   
Sbjct: 188 EDLSFRYLNEIEFYKISHMMNEKRREREALVDE----IVKKIKD--YTQEQGLYGEVYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSIY+ +   +   +++  +  +R I++           +P  + Y ++G +H +W
Sbjct: 242 PKHIYSIYRKMRDKKKRFDQIYDLITIRCIME-----------TPSDV-YAMVGYIHELW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA PK NGYQS+HTT    +Y     +E+QIRT+EM  +AE G+AAH++ 
Sbjct: 290 RPMPGRFKDYIAAPKANGYQSIHTT----VYGPKGPIEIQIRTKEMHQVAEYGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  + G V                 +N   A+ ++W+  + E Q+    N  + +FVD++
Sbjct: 346 KQGIKGKV-----------------DNQEQAVGMNWIKELVELQD--ASNGDAVDFVDSV 386

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
            +D+   R++VFTP G ++ L K +  +D+AY IHT++G K V AKVNG +V  T  L  
Sbjct: 387 KQDIFSERIYVFTPTGAVQELLKDSGPIDFAYAIHTQVGEKAVGAKVNGRMVPLTAKLKT 446

Query: 617 AEVVEIITYNVSFS 630
            +VVEI+T   SF 
Sbjct: 447 GDVVEIVTNPNSFG 460


>gi|219856114|ref|YP_002473236.1| hypothetical protein CKR_2771 [Clostridium kluyveri NBRC 12016]
 gi|219569838|dbj|BAH07822.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 733

 Score =  338 bits (868), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 197/485 (40%), Positives = 282/485 (58%), Gaps = 62/485 (12%)

Query: 147 ELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNV 206
           ++V++A   A EAH  QKR SGEP+I+HPVEVA IL E+ +D  +I AGLLHD VEDT  
Sbjct: 26  KMVKKAYYFADEAHKKQKRESGEPYIMHPVEVACILAEMGMDTSTIVAGLLHDIVEDTEF 85

Query: 207 VTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRV 266
            + E +  EF   V  +VEG   V+KLGK++ K +    ++ +AD++R+M LAM++++RV
Sbjct: 86  -SREDVSREFSVEVANLVEG---VTKLGKIEYKTK----EEQQADNVRKMLLAMSDDIRV 137

Query: 267 IIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNA 326
           I++KLADRLHNMRTL  +P  KQ   A ET  ++APLA  LGM +IK ELE+L+F Y N 
Sbjct: 138 ILIKLADRLHNMRTLKFLPVKKQKEKAKETFDIYAPLAYRLGMSKIKWELEDLAFRYINQ 197

Query: 327 EDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKA 386
            +Y  + R++++   E EK +E+    ++KK+ ++  +    + T+I    K  YSIY+ 
Sbjct: 198 NEYYFIVRKISEKRVEREKYIEQ----IIKKLREN--MQKAGINTDIEGRPKHFYSIYRK 251

Query: 387 VLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDY 446
           ++K   +I+++  +  +RI            L S  + CY  LG+ H I+ P+P   KDY
Sbjct: 252 MVKKNKTIDQIFDLTAVRI------------LVSTMKDCYAALGIAHTIYKPVPGRFKDY 299

Query: 447 IATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVT 501
           IA PK N YQSLHTT+I     PF        E+QIRT EM   AE GIAAH+       
Sbjct: 300 IAMPKANMYQSLHTTVIGPQGKPF--------EIQIRTFEMHKTAEYGIAAHW------- 344

Query: 502 GLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLL 561
                        + K       +I  +++WL  + EWQ E      + EF++    DL 
Sbjct: 345 -------------KYKEGADTAEDIDKKLTWLREMLEWQRE---TSDAEEFMERFKIDLF 388

Query: 562 GSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVE 621
              VFVFTP+G + NLP  AT +D+AY IHT+IGN  V AKV+G +V   + L   E+VE
Sbjct: 389 SDEVFVFTPKGTVINLPYEATPIDFAYKIHTDIGNSCVGAKVSGKMVPLDYHLKTGEIVE 448

Query: 622 IITYN 626
           +   N
Sbjct: 449 VFVSN 453


>gi|397906545|ref|ZP_10507345.1| GTP pyrophosphokinase , (p)ppGpp synthetase I [Caloramator
           australicus RC3]
 gi|397160502|emb|CCJ34682.1| GTP pyrophosphokinase , (p)ppGpp synthetase I [Caloramator
           australicus RC3]
          Length = 722

 Score =  338 bits (868), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 192/485 (39%), Positives = 292/485 (60%), Gaps = 61/485 (12%)

Query: 145 ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDT 204
           ++E++++A  +A +AH+GQ R SG+P+I+HPVEVA IL E+ LD ++I A LLHD VEDT
Sbjct: 17  DIEMIKKAYNVAEKAHEGQLRESGDPYILHPVEVAIILVEMGLDTDAICAALLHDVVEDT 76

Query: 205 NVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEV 264
           ++ ++E ++ EF  ++  +V+G   V+KLGK++ K    S ++ +A+++R++ +AM +++
Sbjct: 77  HL-SYEDVKREFNESIADLVDG---VTKLGKIEYK----SKEEQQAENIRKVLIAMAKDI 128

Query: 265 RVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYT 324
           RVI++KLADRLHNMRTL ++PP KQ + A ETL ++APLA  LG+ +IK ELE+LS  Y 
Sbjct: 129 RVILIKLADRLHNMRTLKYLPPEKQKAKAEETLDIYAPLAHRLGISKIKWELEDLSLRYL 188

Query: 325 NAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIY 384
           + ++Y ++  +V     E EKE+ E   IL +K+E         +K +I    K  YSIY
Sbjct: 189 HPDEYYELVSKVQKKRAEREKEINEIKNILQEKLEQ------AGIKADIDGRPKHFYSIY 242

Query: 385 KAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMK 444
           + +     + +++  +  +R+I+               + CY  LG+VH +W PIP   K
Sbjct: 243 RKMHYKNKTFDQIFDLLAVRVIV------------DTVKDCYAALGIVHTLWKPIPGRFK 290

Query: 445 DYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           DYIA PKPN YQSLH+T+I     PF        E+QIRT EM   AE GIAAH+  +  
Sbjct: 291 DYIAMPKPNMYQSLHSTVIGPNGQPF--------EIQIRTWEMHRTAEYGIAAHWKYKEG 342

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
           +                        +I  ++ WL  I E Q+E      + EF++T+  D
Sbjct: 343 INN-------------------KELDIDEKLHWLRQILELQKE---AKDATEFMETVKID 380

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           L    VFVFTP+G + +LP  +T +D+AY IHT++GNK V AKVNG +V   + L   ++
Sbjct: 381 LFSDEVFVFTPKGAVIDLPVDSTPIDFAYRIHTDVGNKCVGAKVNGRMVPLDYKLKTGDI 440

Query: 620 VEIIT 624
           VEIIT
Sbjct: 441 VEIIT 445


>gi|403744544|ref|ZP_10953770.1| (p)ppGpp synthetase I, SpoT/RelA [Alicyclobacillus hesperidum
           URH17-3-68]
 gi|403122078|gb|EJY56326.1| (p)ppGpp synthetase I, SpoT/RelA [Alicyclobacillus hesperidum
           URH17-3-68]
          Length = 725

 Score =  338 bits (868), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 196/491 (39%), Positives = 284/491 (57%), Gaps = 50/491 (10%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           SY S  EL+ VR+A   A  AH GQ R SGEP+I HP+ VA IL +L+LD  ++ A LLH
Sbjct: 19  SYCSQEELDEVRQAYEFASRAHAGQVRMSGEPYITHPLAVAYILADLQLDATAVVAALLH 78

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT+V T   I + FGA V  +V+G TK+ ++ +   + E       +A++LR+MF+
Sbjct: 79  DVVEDTSV-TDSNIVQTFGAEVASLVDGVTKLKRI-RFDSREEQ------QAENLRKMFM 130

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM  ++RV+I+KLADRLHNMRTL +  P  Q   A ETL++FAPLA  LG+  IK ELE+
Sbjct: 131 AMARDIRVLIIKLADRLHNMRTLRYQTPATQMRKARETLEIFAPLAHRLGINTIKWELED 190

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
           +S  Y N + Y ++   +A   +E E+ +E    +L +K+ +      + +K E+    K
Sbjct: 191 ISLRYLNPQQYYRIVNLMARKRQEREQFIEGVMDVLRQKLGE------LNLKAEVSGRAK 244

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIY+ +       NE+  +  +R+ ++              + CY VLG+VH +W P
Sbjct: 245 HIYSIYRKMTTQHKEFNEIYDLFAIRVTVESI------------KDCYGVLGVVHTMWKP 292

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PK N YQSLHTT+I    E    LE+QIRT EM   AE GIAAH+    
Sbjct: 293 MPGRFKDYIAMPKANMYQSLHTTVIGPNGEP---LEIQIRTWEMHQTAEYGIAAHW---- 345

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
            V    G  R                + A +++W   + EWQ++F     ++EF++T+  
Sbjct: 346 -VYKESGSRRVED-------------DFAKKLAWFREVLEWQQDF---RDAQEFMETLKI 388

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           DL   +VFVFTP+G++  LP G+  +D+AY IHT+IGN  + AKVNG +V   + L   +
Sbjct: 389 DLFSDQVFVFTPKGDVIELPAGSVPIDFAYRIHTDIGNHCIGAKVNGKMVPLDYRLRTGD 448

Query: 619 VVEIITYNVSF 629
           +VE+IT   S+
Sbjct: 449 IVEVITSKHSY 459


>gi|436839902|ref|YP_007324280.1| GTP pyrophosphokinase [Desulfovibrio hydrothermalis AM13 = DSM
           14728]
 gi|432168808|emb|CCO22174.1| GTP pyrophosphokinase [Desulfovibrio hydrothermalis AM13 = DSM
           14728]
          Length = 737

 Score =  338 bits (867), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 200/486 (41%), Positives = 278/486 (57%), Gaps = 49/486 (10%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           SY+   +L L++RA + +  AH+GQ R SGEP++ HP+ VA++L ++ LD  ++AAGLLH
Sbjct: 29  SYIDNPDLALIQRAYVFSARAHEGQMRLSGEPYLAHPLHVAKLLADMRLDEPTVAAGLLH 88

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           DTVEDT+  T + I E FG  V  IV+G TK+S +       +  S    KA+++R+M L
Sbjct: 89  DTVEDTDT-TIDEIVELFGEEVADIVDGVTKISMM-------DFESKAIAKAENIRKMIL 140

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM E++RV++VKLADRLHNMRTL     +KQ  IA ETL +++PLA  LG+Y +K +LE+
Sbjct: 141 AMAEDIRVLMVKLADRLHNMRTLDFQKSYKQQLIAQETLDIYSPLANRLGLYMVKRDLED 200

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
           L   Y   + Y  +      L ++H    E  +K+L      +  L    ++  I    K
Sbjct: 201 LCLYYLKPDVYNAI---TDGLERQHTLGKEYVDKVLALL---NDILKNNEIEGTIYGRTK 254

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             +SI+K + +   +++EV+ I   R+I+               + CY VLGLVH +W P
Sbjct: 255 HKFSIHKKMQRQGLNLDEVHDIIAFRVIV------------DSVKDCYSVLGLVHSMWKP 302

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           I    KDYI+ PK N YQSLHTT+I    E   R+E+QIRTEEM  +AE GIAAH+  + 
Sbjct: 303 ISGRFKDYISIPKANMYQSLHTTVIGPEGE---RIEIQIRTEEMQQVAEYGIAAHWQYK- 358

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                            G +V   N + A R SWL  I +WQ E       REF+ ++  
Sbjct: 359 ---------------ETGTSVAKQNRD-AERFSWLRQIMDWQREL---EDPREFMASLRF 399

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           DL    V+VFTP GEI  LP GAT VD+AY IHTE+GN    AKVNG LV  T  L N +
Sbjct: 400 DLFNEEVYVFTPAGEIIELPDGATPVDFAYSIHTEVGNHCTGAKVNGRLVPLTTTLKNGD 459

Query: 619 VVEIIT 624
            +E+ T
Sbjct: 460 TIEVFT 465


>gi|317495495|ref|ZP_07953863.1| RelA/SpoT family protein [Gemella morbillorum M424]
 gi|316914309|gb|EFV35787.1| RelA/SpoT family protein [Gemella morbillorum M424]
          Length = 726

 Score =  338 bits (867), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 194/485 (40%), Positives = 291/485 (60%), Gaps = 50/485 (10%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           YLS  ++E++R++   A +AH+GQ R+SGEP+I+HP++VA IL EL+LD+ +I AG LHD
Sbjct: 19  YLSEEQIEIIRKSYEFAKDAHEGQFRKSGEPYILHPIQVAGILTELKLDYATICAGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            VEDT   TFE I++ FG  +  IV+G   V+KL K+K ++   S    +A++ R++F++
Sbjct: 79  VVEDTKY-TFEDIQQTFGEDIAVIVDG---VTKLDKVKFRSRKQS----QAENHRKLFVS 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           + +++RVI VKLADRLHNMRT+ +M   KQ  I++ETL+++APLA  LG+  IK ELE+ 
Sbjct: 131 IAKDLRVIFVKLADRLHNMRTMKYMREEKQREISSETLEIYAPLAHRLGISSIKWELEDT 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           S  Y +   Y      +  + K+   E EE+ K     I     L    +K ++    K 
Sbjct: 191 SLRYLHPSQYFS----IVGMMKQKRSEREESIKDACDSI--TSLLGENNIKAQVTGRPKH 244

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIYK ++K   + +++  +  +R+++     + V         CY  LGLV+ +W PI
Sbjct: 245 IYSIYKKMVKQNKTFDQIYDLLAVRVLV-----NSVAD-------CYATLGLVNNLWVPI 292

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P  +KDYIA PKPN YQSLHTT+I    ++   LEVQIRT EM  IAE+GIAAH++ +  
Sbjct: 293 PGRIKDYIAMPKPNMYQSLHTTVIAPDGQT---LEVQIRTYEMHEIAEKGIAAHWAYK-- 347

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
                           GK V  NN N   +++W   I E  E      T+  F++++  D
Sbjct: 348 ---------------EGKKVNKNN-NFYEKLNWFQKIAENDE---TEATAESFMESLKVD 388

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           LL  +++VFTP  +I  LPKG+ +VD+AY IH+E+GNKM+ A VN  +    +VL+  E+
Sbjct: 389 LLSDKIYVFTPNSDIIELPKGSCIVDFAYAIHSEVGNKMIGATVNDKIEPFDYVLSTGEI 448

Query: 620 VEIIT 624
            +I T
Sbjct: 449 CDIRT 453


>gi|365840434|ref|ZP_09381623.1| GTP diphosphokinase [Anaeroglobus geminatus F0357]
 gi|364561473|gb|EHM39373.1| GTP diphosphokinase [Anaeroglobus geminatus F0357]
          Length = 734

 Score =  338 bits (867), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 192/478 (40%), Positives = 284/478 (59%), Gaps = 51/478 (10%)

Query: 147 ELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNV 206
           E +R+A  LA +AH  QKR SGEP+I+HP+ VA+IL ++E+D  +I A L+HD VEDT  
Sbjct: 27  EDIRKAYELANDAHKEQKRVSGEPYILHPLAVAQILADMEIDTTTITASLMHDVVEDT-T 85

Query: 207 VTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRV 266
            T E +E  FG  V  +V+G TK+++L       +  + +D + + +R+MFLAM ++VRV
Sbjct: 86  YTLEDMERLFGKEVAFLVDGVTKLNRL-------DYRTKEDQQVNSMRKMFLAMAKDVRV 138

Query: 267 IIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNA 326
           +++KLADRLHNMRTL  M   KQ  IA ETL+++APLA  LG++ IK ELE+LSF Y   
Sbjct: 139 VVIKLADRLHNMRTLKFMRSEKQKRIAQETLEIYAPLAHRLGIFNIKWELEDLSFRYMEP 198

Query: 327 EDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKA 386
           + Y  +  ++ +  +  E+ + EA  +L + + +        +  EI    K  YSIYK 
Sbjct: 199 DKYYDLVDQMKEKRQVREEIVNEAIDVLKETLSES------GISFEINGRPKHFYSIYKK 252

Query: 387 VLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDY 446
           + K    ++++  +  +R+I+            +  Q CY VLG+VH +W P+P   KDY
Sbjct: 253 MKKDNRDLSQIYDLYAIRVIV------------NTVQDCYGVLGIVHSLWKPLPYRFKDY 300

Query: 447 IATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGH 506
           IA PKPN YQSLHTT+I    +    +E+QIRT EM  IAE G+AAH+  +       GH
Sbjct: 301 IAMPKPNNYQSLHTTVIGTRGQP---VEIQIRTWEMHHIAEYGVAAHWRYK------EGH 351

Query: 507 ARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSRVF 566
           A        G+T   +      ++ WL  + EWQ+        +EFV+ +  D     VF
Sbjct: 352 A-------AGRTSEFDE-----KMGWLRNLLEWQD----TSNPQEFVNALKLDAFSDEVF 395

Query: 567 VFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
           VFTPRG++ +LP+GA  +D+AY IHT++G++ V AKVN  +V   + L N ++VEIIT
Sbjct: 396 VFTPRGDVIDLPQGAIPIDFAYRIHTDVGHRCVGAKVNSKIVPLDYALKNGDIVEIIT 453


>gi|425737468|ref|ZP_18855741.1| GTP pyrophosphokinase [Staphylococcus massiliensis S46]
 gi|425482816|gb|EKU49972.1| GTP pyrophosphokinase [Staphylococcus massiliensis S46]
          Length = 729

 Score =  338 bits (867), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 194/493 (39%), Positives = 293/493 (59%), Gaps = 53/493 (10%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           +YLS  + E V ++  +A+EAH+GQ R++G PFI+HP++VA IL E+ LD  +I AG LH
Sbjct: 18  TYLSKEDYEYVLKSYHIAYEAHEGQFRKNGLPFIMHPIQVAGILTEMRLDGPTIVAGFLH 77

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D +EDT+  TF+ ++  F   + RIV+G TK+ K+ K + K E       +A++ R++F+
Sbjct: 78  DVIEDTSY-TFDDVKGIFNEEIARIVDGVTKLKKV-KYRSKEEQ------QAENHRKLFI 129

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           A+ ++VRVI+VKLADRLHNMRTL  MP  KQ  I+ ETL+++APLA  LG+  IK ELE+
Sbjct: 130 AIAKDVRVILVKLADRLHNMRTLKAMPREKQVRISKETLEIYAPLAHRLGINTIKWELED 189

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
           ++  Y +   Y     R+ +L K+   E E+  +  +K I   Q +D+M++  +I    K
Sbjct: 190 IALRYIDNMQYF----RIVNLMKKKRSEREDYIQNAIKNIR--QEMDVMSISGDISGRPK 243

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIY+ ++K +    ++  +  +R+I+            +  + CY VLGLVH +W P
Sbjct: 244 HIYSIYRKMMKQKKQFEQIFDLLAVRVIV------------NSIKDCYAVLGLVHTLWKP 291

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PK N YQSLHTT++     +   LE+QIRT EM  IAE G+AAH++ + 
Sbjct: 292 MPGRFKDYIAMPKQNMYQSLHTTVVG---PNGDPLEIQIRTFEMHEIAEHGVAAHWAYK- 347

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTS--REFVDTI 556
                            GK +   + +   ++SWL  I E       N TS   EF++++
Sbjct: 348 ----------------EGKQITKEDDDYQKKLSWLKEIAE-----TDNTTSDAEEFIESL 386

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             DL   +V+ FTP  ++  LP GA  +D+AY IH+E+GNKM+ AKVNG +V   +VL  
Sbjct: 387 KFDLQSDKVYAFTPESDVIELPYGAVPIDFAYNIHSEVGNKMIGAKVNGKIVPIDYVLKT 446

Query: 617 AEVVEIITYNVSF 629
            ++VEI T   S+
Sbjct: 447 GDIVEIRTSKHSY 459


>gi|343521362|ref|ZP_08758330.1| RelA/SpoT family protein [Parvimonas sp. oral taxon 393 str. F0440]
 gi|343396568|gb|EGV09105.1| RelA/SpoT family protein [Parvimonas sp. oral taxon 393 str. F0440]
          Length = 717

 Score =  338 bits (867), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 205/497 (41%), Positives = 283/497 (56%), Gaps = 55/497 (11%)

Query: 130 LWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
           + E+L   I   +PN ++E + +A     E H+GQ R SGEP+ IHPV VA IL +L +D
Sbjct: 1   MLEELLSKIKSYNPNADVEKITKAYNFTKECHEGQFRNSGEPYFIHPVAVANILADLYMD 60

Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
             +I AGL+HD +EDT V TFE++ E F   +  +V+G   V+KL K+K +    S Q+ 
Sbjct: 61  DATIIAGLMHDILEDTEV-TFEQMAEMFDEEIANLVDG---VTKLKKIKYQ----SKQES 112

Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
           +AD+LR+M LAM  ++RVII+K+ADRLHN+RTL +M   KQ   A ETL+++APLA  LG
Sbjct: 113 QADNLRKMLLAMNSDIRVIIIKIADRLHNIRTLEYMKKAKQLEKAKETLEIYAPLAYRLG 172

Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQF-LDLM 367
           M  +K ELE+LS  Y   E Y  +  RV       +K+  E  KI+   IE+    L   
Sbjct: 173 MSNVKWELEDLSLRYLEPEIYYDLAERV-------KKKRSEREKIINDIIEEISISLKEH 225

Query: 368 TVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYH 427
            ++ EI    K  YSIYK + K   S +E+  +  +RII+         P  S    CY 
Sbjct: 226 NIQGEISGRPKSLYSIYKKMYKQNKSFDEIFDLTAVRIIV---------PTISD---CYA 273

Query: 428 VLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAE 487
           VLG+VH  W PIP   KDYIA PKPN YQSLH TLI     S    EVQIRT EM   AE
Sbjct: 274 VLGIVHSKWKPIPSRFKDYIAVPKPNLYQSLHNTLIS---NSGDVFEVQIRTFEMHKTAE 330

Query: 488 RGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNM 547
            GIAAH+  +  V                ++   ++     +++WL  + +WQ E   N 
Sbjct: 331 YGIAAHWKYKAGV---------------DRSTSFDD-----KLTWLRQLMDWQREVNDN- 369

Query: 548 TSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNL 607
             REF+ +   D +   VFVF+P+G++ NL  GAT +D+AY +HT +GN  V AKV+G +
Sbjct: 370 --REFITSFKEDFVSDEVFVFSPKGDVINLIAGATPIDFAYKVHTAVGNNCVGAKVDGRI 427

Query: 608 VSPTHVLANAEVVEIIT 624
           V   + L N  +VEI+T
Sbjct: 428 VPLNYKLKNGNIVEILT 444


>gi|352518328|ref|YP_004887645.1| GTP pyrophosphokinase [Tetragenococcus halophilus NBRC 12172]
 gi|348602435|dbj|BAK95481.1| GTP pyrophosphokinase [Tetragenococcus halophilus NBRC 12172]
          Length = 737

 Score =  338 bits (867), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 190/490 (38%), Positives = 286/490 (58%), Gaps = 49/490 (10%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y+S      V++A   A +AH  Q R+SGEP+IIHP++VA IL EL +D  +IA G LHD
Sbjct: 19  YMSDEHTAFVKKAYEYAVDAHKDQYRKSGEPYIIHPIQVAGILAELHMDPHTIAVGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            VEDT+V T + ++ EFG  V  IV+G   V+KLGK+K K+    +    A++ R+M LA
Sbjct: 79  VVEDTDV-TLDDLKNEFGHDVAMIVDG---VTKLGKIKYKSHEEQL----AENYRKMLLA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M +++RVI+VKLADRLHNMRTL H+   KQ  IA ETL+++APLA  LG+ +IK ELE+L
Sbjct: 131 MAQDLRVIMVKLADRLHNMRTLKHLRDDKQRRIARETLEIYAPLADRLGISRIKWELEDL 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           S  Y N + Y ++   +     E EK +++A + +    ED      + +  EI    K 
Sbjct: 191 SLRYLNPKQYYRIVHLMQSKRDEREKYVKQAVEEIRIATED------LDIYAEIYGRPKH 244

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YS+Y+ ++  +   +E+  +  +R+I+               + CY VLG +H  W P+
Sbjct: 245 IYSVYRKMVDKKKQFDEIYDLLAIRVIV------------DSIKDCYAVLGAIHTKWKPM 292

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK N YQS+HTT+I     +   +E+QIRT +M  IAE G+AAH++ +  
Sbjct: 293 PGRFKDYIAMPKANMYQSIHTTVIG---PNGNPVEIQIRTHQMHEIAEFGVAAHWAYK-- 347

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
                           G T  +    +  ++ W   + E Q+E   +  + +F++ +  D
Sbjct: 348 ---------------EGHTEEIQPDEMTNQVGWFKELLELQDE---SFDASDFMEGVKGD 389

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           +   +V+VFTP+G++  LPKG+  +D+AY IHT+IGNK V AK+NG +V   + L N ++
Sbjct: 390 IFSDKVYVFTPKGDVSELPKGSGPLDFAYHIHTDIGNKTVGAKINGKMVQLDYNLKNGDI 449

Query: 620 VEIITYNVSF 629
           VEI+T   SF
Sbjct: 450 VEILTSPNSF 459


>gi|126653971|ref|ZP_01725808.1| GTP pyrophosphokinase [Bacillus sp. B14905]
 gi|126589528|gb|EAZ83670.1| GTP pyrophosphokinase [Bacillus sp. B14905]
          Length = 731

 Score =  338 bits (867), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 194/504 (38%), Positives = 297/504 (58%), Gaps = 52/504 (10%)

Query: 126 SPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGEL 185
           +PE ++E ++   SY++   +  V++A  LA +AH  Q R SGEP+IIHPV+VA IL EL
Sbjct: 8   TPEDVFELVK---SYMNDENVAFVKKAYELARDAHIEQFRSSGEPYIIHPVQVAGILAEL 64

Query: 186 ELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSV 245
           ++D E++AAG LHD VEDT+  T + +  EFG  V  +V+G   V+KLGK+K  ++    
Sbjct: 65  QMDPETVAAGFLHDVVEDTDF-TRDDLVREFGEEVAVLVDG---VTKLGKIKYLSKEAQ- 119

Query: 246 QDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAK 305
              +A++ R+MF+AM +++RVI++KLADRLHNMRTL H+P  KQ  I+ ETL++FAPLA 
Sbjct: 120 ---QAENHRKMFVAMAQDIRVILIKLADRLHNMRTLKHLPAEKQRRISKETLEIFAPLAH 176

Query: 306 LLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLD 365
            LG+  +K ELE+ +  Y N + Y     R+  L K+   E E     +M +++    L+
Sbjct: 177 RLGISTVKWELEDTALRYLNPQQYY----RIVSLMKKKRDEREAYLDNVMAEMKSQ--LN 230

Query: 366 LMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQIC 425
            + +  ++    K  YSIY+ ++  +   NE+  +  +R+            L    + C
Sbjct: 231 EVEIDADVYGRPKHIYSIYRKMVLQKKQFNEIYDLLAIRV------------LVDSIKDC 278

Query: 426 YHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLI 485
           Y VLG+VH +W P+P   KDYIA PK N YQSLHTT+I    +    LEVQIRT+EM  I
Sbjct: 279 YAVLGIVHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVIGPYGDP---LEVQIRTKEMHKI 335

Query: 486 AERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVG 545
           AE GIAAH++ +                  G+ V     N+  +++W   I E+Q E   
Sbjct: 336 AEYGIAAHWAYK-----------------EGRKVDHQKQNVDQKLTWFREILEFQNE--- 375

Query: 546 NMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNG 605
           +  + EF++++  DL    V+VFTP G++  LP G+  +D+AY +H+E+GN+ + AK+NG
Sbjct: 376 SSNAEEFMESLKFDLFSDMVYVFTPEGDVIELPAGSVPIDFAYRVHSEVGNRTIGAKING 435

Query: 606 NLVSPTHVLANAEVVEIITYNVSF 629
            +V     L   +++EI+T   SF
Sbjct: 436 KMVPLDTPLKTGDIIEILTSKQSF 459


>gi|289523398|ref|ZP_06440252.1| GTP diphosphokinase [Anaerobaculum hydrogeniformans ATCC BAA-1850]
 gi|289503090|gb|EFD24254.1| GTP diphosphokinase [Anaerobaculum hydrogeniformans ATCC BAA-1850]
          Length = 764

 Score =  338 bits (867), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 196/495 (39%), Positives = 293/495 (59%), Gaps = 53/495 (10%)

Query: 131 WEDL-RPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDW 189
           W++L      YL  NEL+L+  A + A   H  QKR +GEP+++H + VA IL ++ +D 
Sbjct: 54  WQELWSKAAKYLDKNELKLLGEAFVYAANKHKNQKRATGEPYVVHVLSVAGILSDVNIDV 113

Query: 190 ESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVK 249
           E++ A LLHD +EDT+  TFE ++ +FG  V  +V+G   V+KLG +  K    +V+D +
Sbjct: 114 ETLVAALLHDVIEDTDS-TFEEVKAKFGTNVAVLVDG---VTKLGNIDFK----TVEDYQ 165

Query: 250 ADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGM 309
           A++LR+MFL M +++RV+++KLADRLHNMRT+  +   KQ  IA ETL+++APLA  LG+
Sbjct: 166 AENLRKMFLVMAKDIRVVLIKLADRLHNMRTIQVLRREKQLRIARETLEIYAPLAHRLGI 225

Query: 310 YQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTV 369
           Y +K ELE+L+F     + Y +++RRV     E E  ++EA   L KK      LD   +
Sbjct: 226 YHMKRELEDLAFKVLEPDMYYEIRRRVRKKLPEREAIIKEAIDALSKK------LDEGGI 279

Query: 370 KTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVL 429
           +  I    K  YSIY+ + +   +I ++  +  LR+I             +    CY VL
Sbjct: 280 RAFITGRAKHFYSIYEKMKRKNLTIEQMYDLLALRVI------------TNSVVDCYQVL 327

Query: 430 GLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERG 489
           G+VH IW PIP    DYIA PK N YQSLHTT++    E    LEVQIRT +M  IAE G
Sbjct: 328 GIVHTIWKPIPGQFDDYIANPKSNMYQSLHTTVVGPSGEP---LEVQIRTWDMHWIAEYG 384

Query: 490 IAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTS 549
           IAAH+  +       G  +P+              ++  +++W+  + E Q   + +   
Sbjct: 385 IAAHWRYK------EGQIKPD--------------DLDTKLTWIRQVLETQ---LDSSEP 421

Query: 550 REFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVS 609
            EF++ +  D+L + VFVFTP+G++ +LPKGAT +D+AY IHTEIGNK V A VNG +V 
Sbjct: 422 SEFLENLKADVLSTEVFVFTPKGDVISLPKGATPLDFAYNIHTEIGNKCVGAMVNGRIVP 481

Query: 610 PTHVLANAEVVEIIT 624
            ++ L N +++ I+T
Sbjct: 482 LSYELKNGDIIRILT 496


>gi|153955745|ref|YP_001396510.1| RelA protein [Clostridium kluyveri DSM 555]
 gi|146348603|gb|EDK35139.1| RelA [Clostridium kluyveri DSM 555]
          Length = 726

 Score =  338 bits (867), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 197/485 (40%), Positives = 282/485 (58%), Gaps = 62/485 (12%)

Query: 147 ELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNV 206
           ++V++A   A EAH  QKR SGEP+I+HPVEVA IL E+ +D  +I AGLLHD VEDT  
Sbjct: 19  KMVKKAYYFADEAHKKQKRESGEPYIMHPVEVACILAEMGMDTSTIVAGLLHDIVEDTEF 78

Query: 207 VTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRV 266
            + E +  EF   V  +VEG   V+KLGK++ K +    ++ +AD++R+M LAM++++RV
Sbjct: 79  -SREDVSREFSVEVANLVEG---VTKLGKIEYKTK----EEQQADNVRKMLLAMSDDIRV 130

Query: 267 IIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNA 326
           I++KLADRLHNMRTL  +P  KQ   A ET  ++APLA  LGM +IK ELE+L+F Y N 
Sbjct: 131 ILIKLADRLHNMRTLKFLPVKKQKEKAKETFDIYAPLAYRLGMSKIKWELEDLAFRYINQ 190

Query: 327 EDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKA 386
            +Y  + R++++   E EK +E+    ++KK+ ++  +    + T+I    K  YSIY+ 
Sbjct: 191 NEYYFIVRKISEKRVEREKYIEQ----IIKKLREN--MQKAGINTDIEGRPKHFYSIYRK 244

Query: 387 VLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDY 446
           ++K   +I+++  +  +RI            L S  + CY  LG+ H I+ P+P   KDY
Sbjct: 245 MVKKNKTIDQIFDLTAVRI------------LVSTMKDCYAALGIAHTIYKPVPGRFKDY 292

Query: 447 IATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVT 501
           IA PK N YQSLHTT+I     PF        E+QIRT EM   AE GIAAH+       
Sbjct: 293 IAMPKANMYQSLHTTVIGPQGKPF--------EIQIRTFEMHKTAEYGIAAHW------- 337

Query: 502 GLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLL 561
                        + K       +I  +++WL  + EWQ E      + EF++    DL 
Sbjct: 338 -------------KYKEGADTAEDIDKKLTWLREMLEWQRE---TSDAEEFMERFKIDLF 381

Query: 562 GSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVE 621
              VFVFTP+G + NLP  AT +D+AY IHT+IGN  V AKV+G +V   + L   E+VE
Sbjct: 382 SDEVFVFTPKGTVINLPYEATPIDFAYKIHTDIGNSCVGAKVSGKMVPLDYHLKTGEIVE 441

Query: 622 IITYN 626
           +   N
Sbjct: 442 VFVSN 446


>gi|306820100|ref|ZP_07453748.1| GTP diphosphokinase [Eubacterium yurii subsp. margaretiae ATCC
           43715]
 gi|304551878|gb|EFM39821.1| GTP diphosphokinase [Eubacterium yurii subsp. margaretiae ATCC
           43715]
          Length = 739

 Score =  338 bits (866), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 198/498 (39%), Positives = 292/498 (58%), Gaps = 57/498 (11%)

Query: 132 EDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWE 190
           E+L   +   +P  ++ ++ +A   A   H+GQ RRSGE +IIHPVEVA IL ELELD  
Sbjct: 3   ENLIQKVKTYNPEADVSIIEKAFEYAKSKHEGQVRRSGEKYIIHPVEVANILAELELDVA 62

Query: 191 SIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKA 250
           SIAAGL+HD VEDT V T ++++  FG  + ++V+G TK+ K+   K K EN      +A
Sbjct: 63  SIAAGLMHDVVEDTEV-TSDQMKSMFGEEIAKLVDGVTKLGKIA-YKTKEEN------QA 114

Query: 251 DDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMY 310
           ++LR+MF+AM +++RV+++KLADRLHNMRTL  MPP+K    + ETL++FAP+A+ LGM+
Sbjct: 115 ENLRKMFMAMGDDIRVVLIKLADRLHNMRTLKFMPPYKAVIKSKETLEIFAPIAERLGMF 174

Query: 311 QIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEA----NKILMKKIEDDQFLDL 366
           +IK E+E+++  YT  + Y  ++R++     + E  + +      + L K+I ++ F   
Sbjct: 175 KIKWEMEDIALRYTEPDFYFDMRRQIMRRLYQRESYITDMIDFLKENLAKEIPNNHF--- 231

Query: 367 MTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICY 426
                EI    K  YSIYK +     +  E+     +R+I++ K              CY
Sbjct: 232 -----EIYGREKNLYSIYKKMKFKNKAFEEIYDFLAIRVIVQTKAE------------CY 274

Query: 427 HVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIA 486
            VLG+VHG+W PIP   KDYI  PK N YQSLHTT+     E    +EVQIRTEEM   A
Sbjct: 275 WVLGIVHGMWKPIPDRNKDYIGNPKVNNYQSLHTTVFGPGGEL---VEVQIRTEEMHKTA 331

Query: 487 ERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGN 546
           E GIAAH+  +             GR      +  + + +  +++WL  + +WQ+E    
Sbjct: 332 EYGIAAHWKYK------------QGR------IDPHESEMDKKLAWLRQLMDWQKEVTD- 372

Query: 547 MTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGN 606
               E++ ++  DL   +VFVFTP+G+I  LP G+T +D AY IHT +GNK V AK+N  
Sbjct: 373 --PDEYMQSLKTDLYSHQVFVFTPKGDIIELPAGSTPIDMAYKIHTNVGNKCVGAKINNK 430

Query: 607 LVSPTHVLANAEVVEIIT 624
           +V     L N ++VEI+T
Sbjct: 431 IVPLDTELKNGQIVEIMT 448


>gi|258515502|ref|YP_003191724.1| (p)ppGpp synthetase I SpoT/RelA [Desulfotomaculum acetoxidans DSM
           771]
 gi|257779207|gb|ACV63101.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfotomaculum acetoxidans DSM
           771]
          Length = 727

 Score =  338 bits (866), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 195/498 (39%), Positives = 295/498 (59%), Gaps = 62/498 (12%)

Query: 134 LRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIA 193
           ++  I+Y    ++  +R+A  +A  AH  Q R SGEP+I HP+ VA+IL +LELD E++A
Sbjct: 5   IQKLINYNPKADIAFLRKAYNVAEAAHRNQWRISGEPYIFHPLAVAKILADLELDIEALA 64

Query: 194 AGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDL 253
             LLHD VEDT + T + IE++FG+ V  +V+G TK+SK+   K K E+      +A++L
Sbjct: 65  GALLHDVVEDTEI-TLQDIEKDFGSEVALLVDGVTKLSKID-FKSKEEH------QAENL 116

Query: 254 RQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIK 313
           R+MFLAM +++RVI++KLADRLHN+RTL   P  KQ  IA ETL++FAPLA  LG+Y +K
Sbjct: 117 RKMFLAMAKDIRVILIKLADRLHNLRTLGAQPEAKQKEIALETLEIFAPLAHRLGIYHLK 176

Query: 314 SELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEI 373
            E+E+L+F +     Y ++  +VA    + E+++ E  ++L KK     F+D+  +K +I
Sbjct: 177 WEIEDLAFRFLQPSKYYELADKVAKTRNKREEDINEIIEVLKKK-----FIDV-GIKADI 230

Query: 374 RSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVH 433
           +   K  YSIY+ + + +    ++  I  +R+ +               + CY  LG+VH
Sbjct: 231 QGRPKHLYSIYEKMQRQKKDFAQILDIMAVRVTV------------DTVKDCYGTLGIVH 278

Query: 434 GIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMDLIAER 488
            +W PIP   KDYIA PK N YQSLHTT+I     PF        E+Q+RT EM   AE 
Sbjct: 279 TLWKPIPGRFKDYIAMPKSNMYQSLHTTVIGPHGDPF--------EIQMRTWEMHRTAEY 330

Query: 489 GIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMT 548
           GIAAH+    +  G  GHA+   +   GK +            WL  + EWQ +      
Sbjct: 331 GIAAHWC---YKEG--GHAQ---KGFDGKLI------------WLRQLLEWQHDM---RD 367

Query: 549 SREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLV 608
           ++EF++ +  D+    VFVF+P+G+I  LP  A  +D+A+ IHT++GN+ + AKVNG +V
Sbjct: 368 AKEFIEGLKIDIFAESVFVFSPKGDIIELPAEAVPIDFAFRIHTDVGNRCMGAKVNGRIV 427

Query: 609 SPTHVLANAEVVEIITYN 626
              + L N ++VE++T N
Sbjct: 428 PLDYKLKNGDIVEVLTSN 445


>gi|85859448|ref|YP_461650.1| GTP pyrophosphokinase [Syntrophus aciditrophicus SB]
 gi|85722539|gb|ABC77482.1| GTP pyrophosphokinase / guanosine-3',5'-bis(Diphosphate)
           3'-pyrophosphohydrolase [Syntrophus aciditrophicus SB]
          Length = 723

 Score =  338 bits (866), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 194/497 (39%), Positives = 295/497 (59%), Gaps = 52/497 (10%)

Query: 129 RLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
           R+ + L  T  YL+P E EL+ +A + +   H GQ R SGEP++ HP+EVA IL ++ELD
Sbjct: 3   RITDILDKTQEYLTPIEQELIEKAYIFSASVHQGQVRLSGEPYMTHPMEVAGILSDMELD 62

Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
             +IA GLLHDTVEDT + T E+IEE FG  V  +V+G TK+SK+          S ++ 
Sbjct: 63  AATIATGLLHDTVEDT-LTTLEQIEELFGKDVAFLVDGLTKISKIT-------FSSQEER 114

Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
           +A++ R+M LAM+ ++R+++V+LADR+HNMRTL    P +Q  IA ET++++APLA  LG
Sbjct: 115 QAENFRKMILAMSADIRILLVRLADRIHNMRTLEFHTPERQKYIAKETMELYAPLANRLG 174

Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
           +Y+++ ELE+++F Y + E YA + RR+A   ++ ++  EE   I+  K      LD   
Sbjct: 175 IYRMQVELEDIAFRYLDYESYANLSRRIALKREKRDEYTEEVKSIIQAK------LDEYG 228

Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
           +K  +    K  +SI+K + + + + +EV  +   RII+              ++ CY  
Sbjct: 229 MKGVVEGRAKHFWSIHKKMHEQKINFDEVYDLTAFRIILD----------SDKEKDCYEA 278

Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-PFLYESMFRLEVQIRTEEMDLIAE 487
           L +VH +W P+PR  KDYIA PK N Y+SLHTT+I P+      R+EVQIRT EM   AE
Sbjct: 279 LSIVHSLWIPVPRRFKDYIAMPKANNYRSLHTTVIGPYGQ----RVEVQIRTREMHEWAE 334

Query: 488 RGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNM 547
            GIAAH+                 R    +++  ++     +I  L  + E Q+E     
Sbjct: 335 EGIAAHW-----------------RYKEKRSLPGDDEE---QIRKLRELLEVQQEL---K 371

Query: 548 TSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNL 607
             REF+  +   L    V+VFTP G++++ PKGAT +D+AY IHT++G++ + AKVN ++
Sbjct: 372 NPREFMSNLKLALFPDEVYVFTPGGDVRSFPKGATPIDFAYSIHTDVGHQCIGAKVNRSI 431

Query: 608 VSPTHVLANAEVVEIIT 624
           V   + L N ++VEIIT
Sbjct: 432 VPLKYELKNGDIVEIIT 448


>gi|424788484|ref|ZP_18215238.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           intermedius BA1]
 gi|422112705|gb|EKU16477.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           intermedius BA1]
          Length = 738

 Score =  338 bits (866), Expect = 7e-90,   Method: Compositional matrix adjust.
 Identities = 192/494 (38%), Positives = 294/494 (59%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YLSP ++ LV++AL+ A + H GQ R+SGEP+IIHP++VA IL +L+LD  S+A G 
Sbjct: 16  TKKYLSPEDIALVQKALVYAVDRHRGQFRQSGEPYIIHPIQVAGILAKLKLDAISVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDTN  T + ++ EFG  VR IV+G   V+KLGK+K  +    +    A++ R+M
Sbjct: 76  LHDVVEDTNA-TLDDLDREFGHDVRGIVDG---VTKLGKVKYMSHEEQL----AENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM++++RVI+VKLADRLHNMRTL H+   KQ  I+ ET++++APLA  LG+  +K EL
Sbjct: 128 LMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISSVKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+L+F Y N  ++ K    ++ L KE  +E EE    +++KIE   +     ++  I   
Sbjct: 188 EDLAFRYLNPTEFYK----ISHLMKEKRREREELVDEVVRKIE--TYASDRNLRGNIYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSIY+ +   +   +E+  +  +R I+              Q   Y +LG +H +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFDEIYDLIAIRCIL------------DTQSDVYAMLGYIHELW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA  K NGYQS+HTT    +Y     +E QIRT+EM  +AE G+AAH++ 
Sbjct: 290 RPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  + G V                 ++   A+ ++W+  + E Q++   +  +++FVD++
Sbjct: 346 KKGIKGQV-----------------DSKESAIGMNWIKEMMELQDQ---SNDAQDFVDSV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             + L   ++VFTP G +++LPK +  +D+AY IHT++G K V AKVNG +V  T  L  
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKAVGAKVNGRMVPLTTKLKT 445

Query: 617 AEVVEIITYNVSFS 630
            + VEI+T   SF 
Sbjct: 446 GDQVEIVTSTNSFG 459


>gi|315640053|ref|ZP_07895178.1| GTP diphosphokinase [Enterococcus italicus DSM 15952]
 gi|315484181|gb|EFU74652.1| GTP diphosphokinase [Enterococcus italicus DSM 15952]
          Length = 745

 Score =  338 bits (866), Expect = 7e-90,   Method: Compositional matrix adjust.
 Identities = 191/491 (38%), Positives = 288/491 (58%), Gaps = 49/491 (9%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y+S   +  V++AL  A  AH+GQ R+SGEP+IIHP++VA IL EL++D  ++A G LHD
Sbjct: 27  YMSAEHVAFVQKALDYATSAHEGQFRKSGEPYIIHPIQVAGILAELQMDPHTVATGFLHD 86

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            VEDT+V T + + EEFG  V  +V+G   V+KLGK+K K+    +    A++ R+M +A
Sbjct: 87  VVEDTDV-TLQDLTEEFGPDVAMLVDG---VTKLGKIKYKSHEEQL----AENHRKMLIA 138

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M +++RVI+VKLADRLHNMRTL H+   KQ  IA ETL ++APLA  LG+ +IK ELE+ 
Sbjct: 139 MAQDLRVIMVKLADRLHNMRTLKHLREDKQRRIARETLDIYAPLAHRLGISRIKWELEDR 198

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           S  Y N + Y ++   +     E E  +++  + L    E+      + +  EI    K 
Sbjct: 199 SLRYINPQQYYRIVHLMKTKRDEREAYVDKTVEELRIATEE------LDIYAEIYGRPKH 252

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIY+ ++  +   +E+  +  +R+I+               + CY VLG +H  W P+
Sbjct: 253 IYSIYRKMVDKKKQFDEIYDLLAIRVIV------------DSIKDCYAVLGTIHTKWKPM 300

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK N YQSLHTT+I     +   +E+QIRT EM  IAE G+AAH++ +  
Sbjct: 301 PGRFKDYIAMPKANMYQSLHTTVIG---PNGNPVEIQIRTHEMHEIAEFGVAAHWAYK-- 355

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
                           GKT  +N   +  ++ W   I E ++E   +  + +F++ +  D
Sbjct: 356 ---------------EGKTDKVNPDQMTEQVGWFKEILELKDE---SYDASDFMEGVKGD 397

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           +   +V+VFTP G++  LP+G++ +D+AY IHT+IGNK V AK+NG +V   + L N ++
Sbjct: 398 IFSDKVYVFTPNGDVSELPQGSSPLDFAYNIHTDIGNKTVGAKINGKMVQLDYKLKNGDI 457

Query: 620 VEIITYNVSFS 630
           VEI+T   SF 
Sbjct: 458 VEIMTSPNSFG 468


>gi|14325225|dbj|BAB60670.1| Rel [Listeria monocytogenes]
          Length = 738

 Score =  338 bits (866), Expect = 7e-90,   Method: Compositional matrix adjust.
 Identities = 193/490 (39%), Positives = 292/490 (59%), Gaps = 50/490 (10%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++   L LV++A   A ++   Q R+SGEP+IIHP++VA IL EL++D  ++A+G LHD
Sbjct: 19  YMNQEHLALVKKAYEFARDSRKEQFRKSGEPYIIHPIQVAGILVELKMDPSTVASGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            VEDT  VT   +EE FG+ V  +V+G   V+KLGK+K K    S ++ +A++ R+MF+A
Sbjct: 79  VVEDT-PVTLADLEEVFGSEVAMLVDG---VTKLGKIKYK----SHEEQQAENHRKMFIA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M +++RVI++KLADRLHNMRTL H+P  KQ  IA ETL++FAPLA  LG+ ++K ELE+ 
Sbjct: 131 MAQDIRVILIKLADRLHNMRTLKHLPVEKQRRIANETLEIFAPLAHRLGISRVKWELEDT 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           +  Y N + Y     R+  L K+     E     ++  + ++  LD + ++ +I    K 
Sbjct: 191 ALRYLNPQQYY----RIVHLMKQKRDARERYLHDVIDGVNEN--LDELNIQADISGRPKH 244

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIY+ + +     NE+  +  +RI++            S  + CY VLG++H  W P+
Sbjct: 245 IYSIYRKMSEQNKQFNEIYDLLAVRIVV------------SSIKDCYAVLGIIHTRWKPM 292

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK N YQS+HTT+I    E    LEVQIRT EM  IAE G+AAH+     
Sbjct: 293 PGRFKDYIAMPKSNMYQSIHTTVIGPQGEP---LEVQIRTHEMHQIAEYGVAAHW----- 344

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
                  A   G+    KT   N      +++W   I E+Q E   +  + EF++++  D
Sbjct: 345 -------AYKEGKVVNSKTSFDN------KLTWFREILEYQNE---SDNAEEFMESLKLD 388

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           L    V+VFTP+G++  LP G+  +D+AY +HTEIGNK + AK+NG +V+  + L   ++
Sbjct: 389 LFSDVVYVFTPKGDVYELPNGSVPLDFAYRVHTEIGNKTIGAKINGKIVTLDYKLKTGDI 448

Query: 620 VEIITYNVSF 629
           ++I+T   S+
Sbjct: 449 IDILTSKHSY 458


>gi|169829352|ref|YP_001699510.1| GTP pyrophosphokinase [Lysinibacillus sphaericus C3-41]
 gi|168993840|gb|ACA41380.1| GTP pyrophosphokinase [Lysinibacillus sphaericus C3-41]
          Length = 731

 Score =  338 bits (866), Expect = 7e-90,   Method: Compositional matrix adjust.
 Identities = 194/504 (38%), Positives = 296/504 (58%), Gaps = 52/504 (10%)

Query: 126 SPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGEL 185
           +PE ++E ++   SY++   +  V++A  LA +AH  Q R SGEP+IIHPV+VA IL EL
Sbjct: 8   TPEDVFELVK---SYMNDENVAFVKKAYELARDAHIEQFRSSGEPYIIHPVQVAGILAEL 64

Query: 186 ELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSV 245
           ++D E++AAG LHD VEDT+  T + +  EFG  V  +V+G   V+KLGK+K  ++    
Sbjct: 65  QMDPETVAAGFLHDVVEDTDF-TRDDLVREFGEEVAVLVDG---VTKLGKIKYLSKEAQ- 119

Query: 246 QDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAK 305
              +A++ R+MF+AM +++RVI++KLADRLHNMRTL H+P  KQ  I+ ETL++FAPLA 
Sbjct: 120 ---QAENHRKMFVAMAQDIRVILIKLADRLHNMRTLKHLPAEKQRRISKETLEIFAPLAH 176

Query: 306 LLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLD 365
            LG+  +K ELE+ +  Y N + Y     R+  L K+   E E     +M +++    L+
Sbjct: 177 RLGISTVKWELEDTALRYLNPQQYY----RIVSLMKKKRDEREAYLDNVMAEMKSQ--LN 230

Query: 366 LMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQIC 425
            + +  ++    K  YSIY+ ++  +   NE+  +  +R+            L    + C
Sbjct: 231 EVEIDADVYGRPKHIYSIYRKMVLQKKQFNEIYDLLAIRV------------LVDSIKDC 278

Query: 426 YHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLI 485
           Y VLG+VH +W P+P   KDYIA PK N YQSLHTT+I    +    LEVQIRT+EM  I
Sbjct: 279 YAVLGIVHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVIGPYGDP---LEVQIRTKEMHKI 335

Query: 486 AERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVG 545
           AE GIAAH++ +                  GK       N+  +++W   I E+Q E   
Sbjct: 336 AEYGIAAHWAYK-----------------EGKKADHQKQNVDQKLTWFREILEFQNE--- 375

Query: 546 NMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNG 605
           +  + EF++++  DL    V+VFTP G++  LP G+  +D+AY +H+E+GN+ + AK+NG
Sbjct: 376 SSNAEEFMESLKFDLFSDMVYVFTPEGDVIELPAGSVPIDFAYRVHSEVGNRTIGAKING 435

Query: 606 NLVSPTHVLANAEVVEIITYNVSF 629
            +V     L   +++EI+T   SF
Sbjct: 436 KMVPLDTPLKTGDIIEILTSKQSF 459


>gi|331269250|ref|YP_004395742.1| (p)ppGpp synthetase I SpoT/RelA [Clostridium botulinum BKT015925]
 gi|329125800|gb|AEB75745.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium botulinum BKT015925]
          Length = 730

 Score =  338 bits (866), Expect = 7e-90,   Method: Compositional matrix adjust.
 Identities = 195/483 (40%), Positives = 287/483 (59%), Gaps = 60/483 (12%)

Query: 147 ELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNV 206
           +++ +A   A  AH  QKR SGEP+IIHPVEVA IL E+ LD  +IAA LLHD +EDT+ 
Sbjct: 19  DIIIKAYNYAENAHKEQKRVSGEPYIIHPVEVACILAEMGLDENTIAASLLHDVIEDTDY 78

Query: 207 VTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRV 266
            T+E +E +F + V  +VEG   V+KLGK+K K +    ++ +++++R+M LAMT+++RV
Sbjct: 79  -TYEDVERDFNSEVANLVEG---VTKLGKIKFKTK----EEQQSENVRKMLLAMTKDIRV 130

Query: 267 IIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNA 326
           I++KLADRLHNMRTL +M   KQ   A ETL ++APLA  LG+ +IK ELE+LS  Y N 
Sbjct: 131 ILIKLADRLHNMRTLKYMTVEKQKEKAKETLDIYAPLAHRLGISKIKWELEDLSLRYLNP 190

Query: 327 EDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKA 386
            +Y  + R+VA+  KE E+ +E     L +K+ED        +K+EI    K  YSIY+ 
Sbjct: 191 NEYYDLVRKVAEKRKEREEYIERIIHELSEKLED------AGIKSEIAGRPKHFYSIYRK 244

Query: 387 VLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDY 446
           ++    +I+++  +  +RI            L    + CY VLG+VH ++ PIP   KDY
Sbjct: 245 MVIKNKTIDQIFDLTAVRI------------LVEDVKDCYAVLGMVHTMYKPIPGRFKDY 292

Query: 447 IATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVT 501
           IA PKPN YQSLH+T+I     PF        E+QIRT +M   +E GIAAH+    +  
Sbjct: 293 IAMPKPNMYQSLHSTVIGPQGKPF--------EIQIRTYDMHNTSEYGIAAHWK---YKE 341

Query: 502 GLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLL 561
           G   ++               + +   +++WL  + EWQ E        EF++    D+ 
Sbjct: 342 GFSKNS---------------DNDFEAKLAWLREVLEWQRE---TSNPEEFMEDFKIDMF 383

Query: 562 GSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVE 621
              VFVFTP+G++ NLP  +T +D+AY IHT+IG++ +  KVNG +V   + L   E+VE
Sbjct: 384 SDEVFVFTPKGDVINLPSNSTPIDFAYRIHTDIGHRCIGGKVNGKIVPLDYHLKTGEIVE 443

Query: 622 IIT 624
           ++T
Sbjct: 444 VLT 446


>gi|256826847|ref|YP_003150806.1| (p)ppGpp synthetase, RelA/SpoT family [Cryptobacterium curtum DSM
           15641]
 gi|256582990|gb|ACU94124.1| (p)ppGpp synthetase, RelA/SpoT family [Cryptobacterium curtum DSM
           15641]
          Length = 856

 Score =  338 bits (866), Expect = 7e-90,   Method: Compositional matrix adjust.
 Identities = 201/500 (40%), Positives = 289/500 (57%), Gaps = 53/500 (10%)

Query: 126 SPERLWEDLRPTIS-YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
           +PE  + DL    + YL+ +E +L+RRA   A  AH GQ R+SGEPF+ HPVEVA IL +
Sbjct: 111 TPEERFADLDEACAVYLNEDERDLLRRAFEFARSAHKGQCRKSGEPFVSHPVEVALILSD 170

Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
           L +D E++AA LLHD VEDT+  T E +  EFG  V  +V+G TK++++       E  +
Sbjct: 171 LRMDAETLAAALLHDVVEDTDT-TKEELAHEFGEAVADLVDGVTKITRI-------EVEN 222

Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
           + D +A  +R+MF+AM +++RVI++KLADRLHNMRTLS +   ++   + ETL+++AP+A
Sbjct: 223 LSDEQAATIRKMFVAMNKDIRVIVIKLADRLHNMRTLSALREDRRIFKSHETLEIYAPIA 282

Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
             LG+ QIK ELE+L+F Y     + ++ R VA+   E E+ L     IL  ++E     
Sbjct: 283 HRLGIGQIKWELEDLAFFYLEPGKFKQISRMVAESRMEREEYLGNVIDILHGEMEK---- 338

Query: 365 DLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
               +  +I    K  YSIY+ +       +E+  +  +RII+                 
Sbjct: 339 --ADIGCQIMGRPKHLYSIYRKMTTHGKGFSEIYDLIAVRIIVDTVAQ------------ 384

Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDL 484
           CY  LG VH +W P+P   KDYIA PK N YQSLHTT+I     +   LEVQIRTEEM  
Sbjct: 385 CYSALGAVHSLWHPMPGRFKDYIAMPKYNMYQSLHTTVIG---PAGRPLEVQIRTEEMHR 441

Query: 485 IAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFV 544
           ++E G+AAH+  +    G  G  R                    +++WL  + +WQ+E  
Sbjct: 442 MSEYGVAAHWRYKEGAKGESGFDR--------------------QLAWLRQMMDWQDE-- 479

Query: 545 GNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVN 604
               SREF+ ++  DL  S VFVFTP+G+  +L  GAT VD+AY IHTE+GN  V AKVN
Sbjct: 480 -TQDSREFLKSLKVDLAPSEVFVFTPQGDAMSLRAGATPVDFAYAIHTEVGNHCVGAKVN 538

Query: 605 GNLVSPTHVLANAEVVEIIT 624
           G++V  ++ L   + VEI+T
Sbjct: 539 GSIVPLSYELQMGDRVEILT 558


>gi|427412621|ref|ZP_18902813.1| RelA/SpoT family protein [Veillonella ratti ACS-216-V-Col6b]
 gi|425716428|gb|EKU79412.1| RelA/SpoT family protein [Veillonella ratti ACS-216-V-Col6b]
          Length = 744

 Score =  338 bits (866), Expect = 7e-90,   Method: Compositional matrix adjust.
 Identities = 189/486 (38%), Positives = 281/486 (57%), Gaps = 52/486 (10%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           SYL   + + + RA  +A +AH  QKR SGEP+I+HP+ VA IL  L++D  ++ A LLH
Sbjct: 31  SYLDEADCKEIMRAFEVADKAHAPQKRASGEPYILHPLAVATILANLQIDATTVIAALLH 90

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT   T  +IEE FG  V  +V+G TK+++        + H+ +D + ++ R+M L
Sbjct: 91  DVVEDTEY-TLPQIEELFGKEVAFLVDGVTKLNQF-------QYHTKEDQQLENYRKMIL 142

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM ++VRV+++KL DRLHNMRTL HM   KQ  IA ETL++FAPLA  LG++ IK ELE+
Sbjct: 143 AMAKDVRVVVIKLGDRLHNMRTLKHMRSDKQKRIAQETLEIFAPLAHRLGIFNIKWELED 202

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
           LSF Y   + Y  +  ++ +     E+ + +  + L K +ED        +K +++   K
Sbjct: 203 LSFRYLEPDKYYDLVEQMQEKRHVREEIVNDTMEQLKKALEDAH------IKADVKGRPK 256

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIYK + K    ++++  +  +R+I+   P             CY VLG+VH +W P
Sbjct: 257 HFYSIYKKMKKDNRDLSQIYDLYAVRVIVDTIPD------------CYAVLGIVHNLWKP 304

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PK N YQSLHTT+I  +  S   +E+QIRT EM  ++E G+AAH+  + 
Sbjct: 305 LPYRFKDYIAMPKSNMYQSLHTTIIGTMGHS---VEIQIRTWEMHRVSEYGVAAHWRYKE 361

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
              G                    + +   ++ WL  + EWQ+        +E V+ +  
Sbjct: 362 GNKG-------------------GDKDFDQKVGWLRQVLEWQDA----SNPKELVNALKL 398

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           D+    VFVFTPRG++  LPKGA  +D+AY IHT++G+  V AKVNG +VS  + L N +
Sbjct: 399 DVFSGEVFVFTPRGDVLKLPKGAVPLDFAYRIHTDVGHHCVGAKVNGKIVSLDYTLQNGD 458

Query: 619 VVEIIT 624
           +V+IIT
Sbjct: 459 IVDIIT 464


>gi|404371563|ref|ZP_10976867.1| RelA/SpoT family protein [Clostridium sp. 7_2_43FAA]
 gi|226912310|gb|EEH97511.1| RelA/SpoT family protein [Clostridium sp. 7_2_43FAA]
          Length = 730

 Score =  338 bits (866), Expect = 7e-90,   Method: Compositional matrix adjust.
 Identities = 196/482 (40%), Positives = 290/482 (60%), Gaps = 49/482 (10%)

Query: 145 ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDT 204
           + ++V++A  LA +AH  QKR SGEP+I HP++VA IL E+ +D  +I AGLLHD +EDT
Sbjct: 17  DTDIVKKAYDLACDAHKNQKRESGEPYITHPIDVAEILAEMGMDTSTIVAGLLHDVIEDT 76

Query: 205 NVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEV 264
           +  T++ I+  F   V  +V+G   V+KLGK++ K +    ++ +AD++R+M LAM +++
Sbjct: 77  HY-TYDDIKNIFNEEVADLVQG---VTKLGKIEYKTK----EEQQADNVRKMLLAMAKDI 128

Query: 265 RVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYT 324
           RVII+KLADRLHN+RTL  MP  KQ   A ETL ++APLA  LG+ +IK ELE+L+F Y 
Sbjct: 129 RVIIIKLADRLHNLRTLKFMPKEKQKQKAKETLDIYAPLAHRLGISKIKWELEDLAFRYL 188

Query: 325 NAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIY 384
           + E+Y  + +++A+   E E  + E  + L  K+E+ +      + ++I    K  YSIY
Sbjct: 189 HEEEYYDLVKQIAEKRVERETYIAEIIEDLHNKLEESE------IDSDIDGRPKHFYSIY 242

Query: 385 KAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMK 444
           K ++    SI ++  +  +RI            L +  + CY VLG+VH I+ PIP   K
Sbjct: 243 KKMINKNKSIEQIFDLTAIRI------------LVNTVKDCYGVLGIVHTIYKPIPGRFK 290

Query: 445 DYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLV 504
           DYIA PKPN YQSLHTT+I    ++    E+QIRT EM   AE GIAAH+  +       
Sbjct: 291 DYIAMPKPNMYQSLHTTVIGPQGKT---FEIQIRTFEMHKTAEYGIAAHWKYK------- 340

Query: 505 GHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSR 564
                 G +   K     N     +++WL  + EWQ+E      + EF++    DL    
Sbjct: 341 -----EGDTQEDKEKSFEN-----KLAWLRDMLEWQKE---TSDAEEFIEGFKIDLFTDE 387

Query: 565 VFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
           +FVFTP+G + NLP GAT +D+AY IHT+IGN+ + +KVNG +V   + L   E+VE++T
Sbjct: 388 IFVFTPKGVVINLPSGATPIDFAYRIHTDIGNRCIGSKVNGKIVPLDYNLKTGEIVEVLT 447

Query: 625 YN 626
            N
Sbjct: 448 SN 449


>gi|224368342|ref|YP_002602505.1| RelA protein [Desulfobacterium autotrophicum HRM2]
 gi|223691058|gb|ACN14341.1| RelA [Desulfobacterium autotrophicum HRM2]
          Length = 716

 Score =  338 bits (866), Expect = 7e-90,   Method: Compositional matrix adjust.
 Identities = 199/494 (40%), Positives = 286/494 (57%), Gaps = 54/494 (10%)

Query: 133 DLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
           D+   I+  +P  +L+++ RA + +   H GQ R SGEP++ HP+EVA IL +++LD ES
Sbjct: 6   DILDKIAEYNPGADLDVIDRAYVYSARVHSGQMRLSGEPYLSHPLEVAAILADMKLDVES 65

Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
           IAA LLHD +EDT+  T + I E FG  +  IV G TK+SKL     K         +A+
Sbjct: 66  IAAALLHDVIEDTHA-TEQEILEMFGPGILHIVAGVTKISKL-TFSTKAAQ------QAE 117

Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLS-HMPPHKQSSIATETLQVFAPLAKLLGMY 310
            LR+M LAM +++RV+++KLADR+HNMRTL  H    KQ SIA ETL ++AP+A  LG++
Sbjct: 118 SLRKMILAMADDIRVVLIKLADRIHNMRTLKFHKSQEKQRSIAQETLDIYAPIAARLGIF 177

Query: 311 QIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVK 370
            IK ELE+LSF+YT+ E+YA +   V    +E E  +    + + +K+ +        ++
Sbjct: 178 WIKQELEDLSFLYTHPEEYASIDLLVNKAKEERESYIATVMERVKEKLANS------NIE 231

Query: 371 TEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLG 430
            +++   K+ YSIY  ++       E+  I   RII+                 CY V+G
Sbjct: 232 ADVKGRYKQHYSIYHKMVTQNLEFEELYDIVAFRIIV------------DTVSRCYEVMG 279

Query: 431 LVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGI 490
           L+H +W PI   +KDYI  PKPN YQSLHTT+I    +   R+E+QIRT EMD IAE GI
Sbjct: 280 LIHSMWKPISGKIKDYIGVPKPNMYQSLHTTVIGPRGD---RVELQIRTREMDKIAESGI 336

Query: 491 AAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSR 550
           AAH+S   +  G  G     G +                 +W+  + E QE F       
Sbjct: 337 AAHWS---YKQG-GGFDEKTGEA----------------FAWIRNLVENQENF---SDPD 373

Query: 551 EFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSP 610
           EF++ +  DL    +++FTP GEIK LPKGAT VD+AY+IHTE+G++   A+VNG LV+ 
Sbjct: 374 EFLENVRIDLYSDEIYIFTPHGEIKTLPKGATPVDFAYLIHTEVGDQCTGARVNGKLVTL 433

Query: 611 THVLANAEVVEIIT 624
           TH L   + +EI+T
Sbjct: 434 THGLITGDTIEIVT 447


>gi|399050755|ref|ZP_10740799.1| (p)ppGpp synthetase, RelA/SpoT family [Brevibacillus sp. CF112]
 gi|433545167|ref|ZP_20501527.1| GTP pyrophosphokinase [Brevibacillus agri BAB-2500]
 gi|398051471|gb|EJL43793.1| (p)ppGpp synthetase, RelA/SpoT family [Brevibacillus sp. CF112]
 gi|432183556|gb|ELK41097.1| GTP pyrophosphokinase [Brevibacillus agri BAB-2500]
          Length = 723

 Score =  338 bits (866), Expect = 7e-90,   Method: Compositional matrix adjust.
 Identities = 198/498 (39%), Positives = 293/498 (58%), Gaps = 50/498 (10%)

Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
           E ++   +YLS ++L+L+ RA  LA +AH+GQ R+SG P+I+HP+ VA IL  L +D  +
Sbjct: 7   EVVKKASTYLSQSDLDLITRAYQLAEKAHEGQIRKSGVPYIMHPIAVAGILANLHMDAVT 66

Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
           IAAG LHD VEDT+V T + + E+FG  V  +V+G TK+ K+ K K K E        A+
Sbjct: 67  IAAGFLHDVVEDTDV-TLDDLREQFGPDVALLVDGVTKLEKI-KYKSKEEQ------LAE 118

Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
           + R+M +AM +++RVI++KLADRLHNMRTL HM   KQ  I+ ETL++FAPLA  LG+  
Sbjct: 119 NHRKMLVAMAQDIRVIMIKLADRLHNMRTLRHMSEEKQREISDETLEIFAPLAHRLGIAS 178

Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
           +K ELE+ +  Y N + Y ++   +     E E  L EA+  + +K+ +      + ++ 
Sbjct: 179 VKWELEDTALRYLNPQQYYRIVNLMQKKRVEREAYLNEASDTIREKLGE------LNIEA 232

Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
           EI    K  YSI+K + K     NE+  +  LRII+            +  + CY VLG+
Sbjct: 233 EISGRPKHIYSIFKKMTKQNKQFNEIYDLLALRIIV------------NDIRDCYAVLGI 280

Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
           VH +W P+P   KDYIA PK N YQSLHTT+I    E    LEVQIRT +M   AE GIA
Sbjct: 281 VHTLWKPMPGRFKDYIAMPKTNMYQSLHTTVIGPKGEP---LEVQIRTWDMHQTAEIGIA 337

Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
           AH++ +                  GK+V     + A ++  L  I E   E   N  ++E
Sbjct: 338 AHWAYK-----------------EGKSVV--QGSFAEKLGSLREIIEGGSEEAPN--AQE 376

Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
           F++++ +DL    VFVFTP+G++  LPKG+  +D++Y IH+ +GN+ + AKVNG +V   
Sbjct: 377 FMESLKQDLFSDTVFVFTPKGDVVELPKGSVPLDFSYRIHSAVGNRTIGAKVNGKIVPLD 436

Query: 612 HVLANAEVVEIITYNVSF 629
           + +   ++VEI+T   S+
Sbjct: 437 YAMKTGDIVEILTSKHSY 454


>gi|288904393|ref|YP_003429614.1| GTP pyrophosphokinase (stringent response) [Streptococcus
           gallolyticus UCN34]
 gi|288731118|emb|CBI12664.1| GTP pyrophosphokinase (stringent response) [Streptococcus
           gallolyticus UCN34]
          Length = 735

 Score =  338 bits (866), Expect = 8e-90,   Method: Compositional matrix adjust.
 Identities = 193/494 (39%), Positives = 299/494 (60%), Gaps = 53/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  Y+S +++ +V++AL  A +AH  Q R+SGEP+IIHP++VA IL +L LD  ++A G 
Sbjct: 16  TAQYMSESDVAIVQKALDYATKAHISQVRQSGEPYIIHPIQVAGILADLHLDVVTVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT V T + IE EFG  VR IV+G   V+KLGK++ K+    +    A++ R+M
Sbjct: 76  LHDVVEDTEV-TLDDIEAEFGKDVRDIVDG---VTKLGKVEYKSHEEQL----AENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM++++RVI+VKLADRLHNMRTL H+   KQ  I+ ET++++APLA  LG+ +IK EL
Sbjct: 128 LMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y N  ++ K+   + +  +E E  ++E    ++KKI+D  +     +  E+   
Sbjct: 188 EDLSFRYLNEIEFYKISHMMNEKRREREALVDE----IVKKIKD--YTQEQGLYGEVYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSIY+ + +     +++  +  +R I++           +P  + Y ++G +H +W
Sbjct: 242 PKHIYSIYRKIKR----FDQIYDLIAIRCIME-----------TPSDV-YAMVGYIHELW 285

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA PK NGYQS+HTT    +Y     +E+QIRT+EM  +AE G+AAH++ 
Sbjct: 286 RPMPGRFKDYIAAPKANGYQSIHTT----VYGPKGPIEIQIRTKEMHQVAEYGVAAHWAY 341

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  + G V                 +N   A+ ++W+    E Q+    N  + +FVD++
Sbjct: 342 KQGIKGKV-----------------DNQEQAVGMNWIKEFVELQD--ASNGDAVDFVDSV 382

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
            +D+   R++VFTP G ++ LPK +  +D+AY IHT++G K V AKVNG +V  T  L  
Sbjct: 383 KQDIFSERIYVFTPTGAVQELPKDSGPIDFAYAIHTQVGEKAVGAKVNGRMVPLTAKLKT 442

Query: 617 AEVVEIITYNVSFS 630
            +VVEI+T   SF 
Sbjct: 443 GDVVEIVTNPNSFG 456


>gi|205374215|ref|ZP_03227014.1| GTP diphosphokinase [Bacillus coahuilensis m4-4]
          Length = 708

 Score =  337 bits (865), Expect = 8e-90,   Method: Compositional matrix adjust.
 Identities = 193/484 (39%), Positives = 288/484 (59%), Gaps = 49/484 (10%)

Query: 146 LELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTN 205
           + LV++A   A +AH  Q R+SGEP+IIHP++VA IL +LE+D  ++AAG LHD VEDT 
Sbjct: 1   MALVQKAYEYADKAHKEQFRKSGEPYIIHPIQVAGILADLEMDAATVAAGFLHDVVEDTP 60

Query: 206 VVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVR 265
           + + + I E F   V  +V+G   V+KLGK+K K    S ++ +A++ R+MF+AM +++R
Sbjct: 61  I-SKQDIAETFNEEVAMLVDG---VTKLGKIKFK----SQEEQQAENHRKMFVAMAQDIR 112

Query: 266 VIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTN 325
           VI++KLADRLHNMRTL H+P  KQ  IA ET+++FAPLA  LG+ +IK ELE+ +  Y N
Sbjct: 113 VILIKLADRLHNMRTLKHLPAEKQRRIANETIEIFAPLAHRLGISKIKWELEDTALRYLN 172

Query: 326 AEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYK 385
            + Y     R+ +L K+   E E+    ++ ++ED   L  + +  E+    K  YSIY+
Sbjct: 173 PQQYY----RIVNLMKKKRDEREQYVDDVIHEMEDS--LRDVDIHAELSGRPKHIYSIYR 226

Query: 386 AVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKD 445
            ++      NE+  +  +RII+            +  + CY VLG++H  W P+P   KD
Sbjct: 227 KMVLQNKQFNEIYDLLAVRIIV------------NSIKDCYAVLGIIHTCWKPMPGRFKD 274

Query: 446 YIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVG 505
           YIA PKPN YQSLHTT+I    +    LEVQIRT +M  IAE G+AAH++ +        
Sbjct: 275 YIAMPKPNMYQSLHTTVIGPKGDP---LEVQIRTRDMHRIAEYGVAAHWAYK-------- 323

Query: 506 HARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSRV 565
                      K    +      ++SW   I E+Q E   +  + EF++ +  DL    V
Sbjct: 324 ---------EEKEHVASRNTFDKKLSWFREILEFQNE---STDAEEFIEALKIDLFSDMV 371

Query: 566 FVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITY 625
           FVFTP+G++  LP G+  +D+AY IH+EIGNK + AKVNG +V+  + L   +++EI+T 
Sbjct: 372 FVFTPKGDVIELPSGSVPIDFAYRIHSEIGNKTIGAKVNGKMVTLDYRLRTGDILEILTS 431

Query: 626 NVSF 629
             S+
Sbjct: 432 KHSY 435


>gi|424826931|ref|ZP_18251766.1| GTP pyrophosphokinase [Clostridium sporogenes PA 3679]
 gi|365980468|gb|EHN16498.1| GTP pyrophosphokinase [Clostridium sporogenes PA 3679]
          Length = 723

 Score =  337 bits (865), Expect = 8e-90,   Method: Compositional matrix adjust.
 Identities = 200/501 (39%), Positives = 288/501 (57%), Gaps = 63/501 (12%)

Query: 130 LWEDLRPTI-SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
           + EDL   I    +  E+E +++A   A  AH  QKR SGEP+I HP EVA IL E+ +D
Sbjct: 1   MLEDLMIKIKDSFTEKEIEFIKKAYNFACNAHKEQKRISGEPYITHPEEVAIILFEMGMD 60

Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
             ++ AGL+HD VEDT   T+E + +EFG  V  +V G   V+KLGK++ K +    ++ 
Sbjct: 61  VNTMIAGLMHDVVEDTQY-TYEDVAKEFGNEVADLVNG---VTKLGKIEYKTK----EEQ 112

Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
           +AD++R+M LAMT+++RVI++KLADRLHNMRTL  MP  KQ   A ETL ++APLA  LG
Sbjct: 113 QADNVRKMLLAMTKDIRVILIKLADRLHNMRTLRFMPVEKQKEKAQETLDIYAPLAHRLG 172

Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
           + +IK ELE+LSF Y N  +Y  + R++A+   E E+ ++E    L       Q L    
Sbjct: 173 ISKIKWELEDLSFRYINPNEYYFLVRKIAEKRAEREEHIKEIVSNLQ------QNLKKAG 226

Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
           +++EI    K  YSIYK +     +++++  +  +RI            L    + CY  
Sbjct: 227 IESEIDGRPKHFYSIYKKMHNKNKNLDQIFDLTAVRI------------LVDTVKDCYAA 274

Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMD 483
           LG+ H ++ PIP   KDYIA PKPN YQSLH+T++     PF        E+QIRT EM 
Sbjct: 275 LGIAHTVYKPIPGRFKDYIAMPKPNMYQSLHSTVMGVGGRPF--------EIQIRTYEMH 326

Query: 484 LIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEF 543
             AE GIAAH+                    + K    N+ NI L+++WL  + +WQ+E 
Sbjct: 327 KTAEYGIAAHW--------------------KYKEAVENSNNIDLKLTWLREMLDWQKE- 365

Query: 544 VGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKV 603
                  EF+     DL    VFVFTP+G++ +LP  AT VD+AY IHT+IG++ + AKV
Sbjct: 366 --TTDPEEFMQGFKIDLFSDEVFVFTPKGKVISLPNRATPVDFAYKIHTDIGHRCIGAKV 423

Query: 604 NGNLVSPTHVLANAEVVEIIT 624
           NG +V   + L   E++E++T
Sbjct: 424 NGKMVPLDYELKTGEIIEVLT 444


>gi|300361857|ref|ZP_07058034.1| GTP diphosphokinase [Lactobacillus gasseri JV-V03]
 gi|300354476|gb|EFJ70347.1| GTP diphosphokinase [Lactobacillus gasseri JV-V03]
          Length = 750

 Score =  337 bits (865), Expect = 8e-90,   Method: Compositional matrix adjust.
 Identities = 197/485 (40%), Positives = 281/485 (57%), Gaps = 47/485 (9%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++   L  V  A   A  AH+GQ R SG+P+IIHP +VA  L  L LD +++AAG LHD
Sbjct: 19  YMNDEHLAFVESAYKFAKNAHEGQFRVSGQPYIIHPTQVAGTLATLRLDPDTVAAGYLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
           TVEDT  VT + I+E+FG  V  IV+G   V+KL K++ K+++H  ++  AD+ R+M +A
Sbjct: 79  TVEDT-PVTNDDIKEKFGKDVAFIVDG---VTKLSKIQYKSKSH--EEYLADNHRKMLIA 132

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M +++RVI+VKLADRLHNM TL H+ P KQ  IA ETL ++APLA  LG+  IK ELE++
Sbjct: 133 MAKDLRVIMVKLADRLHNMHTLDHLRPDKQRRIADETLDIYAPLADRLGIGTIKWELEDM 192

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           S  Y N + Y ++   +     E E  + +A K L       Q LD + ++ EI    K 
Sbjct: 193 SLHYLNPQQYYRIVNLMQSKRSEREGYIADAIKTLK------QTLDSLGIEYEIYGRPKH 246

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIYK ++      +E+  +  +R+I+K              + CY VLG VH  W P+
Sbjct: 247 IYSIYKKMVNKHKDFSEIYDLLAVRVIVK------------SVRDCYAVLGAVHTKWKPM 294

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK NGYQSLHTT+I         LE+QIRTE M  +AE G+AAH++ +  
Sbjct: 295 PGRFKDYIAVPKVNGYQSLHTTIIG---PGGKPLEIQIRTEAMHQVAEYGVAAHWAYKEG 351

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
           V G V     N                  +++    I E Q E      S EF+ ++  D
Sbjct: 352 VKGEVEQTDANK-----------------KLNMFQEILELQNE---TKDSHEFMKSVKTD 391

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           +   RV+VFTP+G++  LPKG+  +D+AYM+H+E+G   V A++NG +V   + L N +V
Sbjct: 392 IFSDRVYVFTPKGDVYELPKGSVPLDFAYMVHSEVGAHSVGARINGKIVPLDYKLKNGDV 451

Query: 620 VEIIT 624
           VE++T
Sbjct: 452 VEMLT 456


>gi|422845570|ref|ZP_16892280.1| GTP diphosphokinase [Lactobacillus delbrueckii subsp. lactis DSM
           20072]
 gi|325684220|gb|EGD26396.1| GTP diphosphokinase [Lactobacillus delbrueckii subsp. lactis DSM
           20072]
          Length = 753

 Score =  337 bits (865), Expect = 9e-90,   Method: Compositional matrix adjust.
 Identities = 197/485 (40%), Positives = 279/485 (57%), Gaps = 50/485 (10%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++ ++L  V  A   A  AH+GQ R SG+P+I+HP +VA  L  L LD +++AAG LHD
Sbjct: 19  YMTADQLAFVESAYQFAARAHEGQTRASGQPYIVHPTQVAGTLANLGLDPDTVAAGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
           TVEDT+V T + I+EEFGA V  IV+G TK++K        E  S ++  A++ R+M +A
Sbjct: 79  TVEDTSV-TNDDIKEEFGADVAFIVDGVTKLNKY-------EYKSHKEFLAENHRKMLIA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M +++RVI+VKLADRLHNM TL H+ P KQ  IA ETL ++APLA  LG+  IK ELE++
Sbjct: 131 MAKDLRVILVKLADRLHNMHTLEHLRPDKQRRIAAETLDIYAPLADRLGIGTIKWELEDM 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           SF Y N E Y K+   +     E E  +++A   L         LD + +K +I    K 
Sbjct: 191 SFHYMNPEAYYKIVSMMDAKRSEREDYIKDAIDYLRGT------LDSLGIKYDISGRPKH 244

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIYK ++      NE+  +  +R+I+         P       CY VLG VH  W P+
Sbjct: 245 IYSIYKKMVNKHKDFNEIYDLLAVRVIV---------PTVKD---CYAVLGAVHTKWKPM 292

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK NGYQSLHTT+I         LE+QIRTEEM  +AE G+AAH++ +  
Sbjct: 293 PGRFKDYIAMPKANGYQSLHTTIIG---PGGKPLEIQIRTEEMHKVAEYGVAAHWAYK-- 347

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
                          RG    ++  +       L+  RE  E    +  + EF++ +  D
Sbjct: 348 ---------------RGNFQGVDEKDGGA----LDIGREILELQKDSNNADEFMEAVHSD 388

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           +   +V+VFTP+GE+  LPKG+  +D+AY IHT++G+  + AKVN  LV   + L N +V
Sbjct: 389 IFADKVYVFTPKGEVYELPKGSVTLDFAYAIHTQVGDHGIGAKVNDKLVPLDYKLKNGDV 448

Query: 620 VEIIT 624
           V+I+T
Sbjct: 449 VDILT 453


>gi|238852662|ref|ZP_04643072.1| GTP pyrophosphokinase [Lactobacillus gasseri 202-4]
 gi|238834808|gb|EEQ27035.1| GTP pyrophosphokinase [Lactobacillus gasseri 202-4]
          Length = 750

 Score =  337 bits (865), Expect = 9e-90,   Method: Compositional matrix adjust.
 Identities = 197/485 (40%), Positives = 281/485 (57%), Gaps = 47/485 (9%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++   L  V  A   A  AH+GQ R SG+P+IIHP +VA  L  L LD +++AAG LHD
Sbjct: 19  YMNDEHLAFVESAYEFAKNAHEGQFRVSGQPYIIHPTQVAGTLATLRLDPDTVAAGYLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
           TVEDT  VT + I+E+FG  V  IV+G   V+KL K++ K+++H  ++  AD+ R+M +A
Sbjct: 79  TVEDT-PVTNDDIKEKFGKDVAFIVDG---VTKLSKIQYKSKSH--EEYLADNHRKMLIA 132

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M +++RVI+VKLADRLHNM TL H+ P KQ  IA ETL ++APLA  LG+  IK ELE++
Sbjct: 133 MAKDLRVIMVKLADRLHNMHTLDHLRPDKQRRIADETLDIYAPLADRLGIGTIKWELEDM 192

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           S  Y N + Y ++   +     E E  + +A K L       Q LD + ++ EI    K 
Sbjct: 193 SLHYLNPQQYYRIVNLMQSKRSEREGYIADAIKTLK------QTLDSLGIEYEIYGRPKH 246

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIYK ++      +E+  +  +R+I+K              + CY VLG VH  W P+
Sbjct: 247 IYSIYKKMVNKHKDFSEIYDLLAVRVIVK------------SVRDCYAVLGAVHTKWKPM 294

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK NGYQSLHTT+I         LE+QIRTE M  +AE G+AAH++ +  
Sbjct: 295 PGRFKDYIAVPKVNGYQSLHTTIIG---PGGKPLEIQIRTEAMHQVAEYGVAAHWAYKEG 351

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
           V G V     N                  +++    I E Q E      S EF+ ++  D
Sbjct: 352 VKGEVEQTDANK-----------------KLNMFQEILELQNE---TKDSHEFMKSVKTD 391

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           +   RV+VFTP+G++  LPKG+  +D+AYM+H+E+G   V A++NG +V   + L N +V
Sbjct: 392 IFSDRVYVFTPKGDVYELPKGSVPLDFAYMVHSEVGAHSVGARINGKIVPLDYKLKNGDV 451

Query: 620 VEIIT 624
           VE++T
Sbjct: 452 VEMLT 456


>gi|225850169|ref|YP_002730403.1| GTP pyrophosphokinase [Persephonella marina EX-H1]
 gi|225646582|gb|ACO04768.1| GTP pyrophosphokinase [Persephonella marina EX-H1]
          Length = 716

 Score =  337 bits (865), Expect = 9e-90,   Method: Compositional matrix adjust.
 Identities = 197/495 (39%), Positives = 289/495 (58%), Gaps = 53/495 (10%)

Query: 130 LWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDW 189
           L EDL   + YL   +++ +R A     E H+GQ R+SGEP+ IHP+E A++L +L+LD 
Sbjct: 9   LVEDLIKKVDYLEDQDIQKIREAAYYIIEKHEGQFRKSGEPYYIHPIEAAKVLADLKLDR 68

Query: 190 ESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVK 249
            +I AGLLHD VEDT+  T + I+E FG TV  IV+G TK+ K       N N S ++ +
Sbjct: 69  TTIIAGLLHDVVEDTDT-TIDEIKERFGETVALIVDGVTKIGKY------NFN-SKEEAE 120

Query: 250 ADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGM 309
           A++ R+M ++M +++RVI+VKLADRLHN+RTL  +P +KQ  IA ETL ++APLA  LG+
Sbjct: 121 AENFRKMLVSMAKDIRVILVKLADRLHNIRTLDPLPEYKQKRIAKETLDIYAPLAARLGL 180

Query: 310 YQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTV 369
           ++IK+ELE+ SF Y   E Y K+   +A+     EK L+E    ++ +I D   LD   +
Sbjct: 181 WKIKAELEDTSFKYLYPEAYKKITTYLAESKTVQEKYLQE----IISQIRD--VLDKHNI 234

Query: 370 KTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVL 429
           K +I+   K  YSIY+  L+   S++++  +  +R+            L    + CY  L
Sbjct: 235 KADIQYRAKHLYSIYEKTLRKDLSLSDIYDVYGVRV------------LVHTIKDCYLAL 282

Query: 430 GLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERG 489
           GL+H +W P+P   KDYI+ PK N YQ+LHTT++    +  F +E+QI+T +M  IAE G
Sbjct: 283 GLIHSLWPPVPGRFKDYISLPKSNMYQALHTTVVA--PKGKF-VEIQIKTYKMHRIAEEG 339

Query: 490 IAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTS 549
           IAAH+                 R   GK +   +       +WL  I E  +E       
Sbjct: 340 IAAHW-----------------RYKGGKYISEKDLK---SFTWLRNILESIKE----NKD 375

Query: 550 REFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVS 609
            E + T+  DL    V+VFTP+G++  LP G+T VD+AY IHT++G++   AKVNG +V 
Sbjct: 376 TEIISTVKGDLSNEEVYVFTPKGDLVKLPLGSTPVDFAYQIHTQVGHRTAGAKVNGKMVP 435

Query: 610 PTHVLANAEVVEIIT 624
               L N +VVEIIT
Sbjct: 436 LDTKLKNGDVVEIIT 450


>gi|365924968|ref|ZP_09447731.1| GTP pyrophosphokinase [Lactobacillus mali KCTC 3596 = DSM 20444]
 gi|420266340|ref|ZP_14768816.1| GTP pyrophosphokinase [Lactobacillus mali KCTC 3596 = DSM 20444]
 gi|394425624|gb|EJE98566.1| GTP pyrophosphokinase [Lactobacillus mali KCTC 3596 = DSM 20444]
          Length = 741

 Score =  337 bits (865), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 199/496 (40%), Positives = 284/496 (57%), Gaps = 59/496 (11%)

Query: 134 LRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIA 193
           +R    Y++   + LV++A   A   H  Q R+SGEP+IIHP++VA IL +L++D  ++ 
Sbjct: 13  IRGVQKYMNEKHVALVKKAYDFANYVHKDQHRQSGEPYIIHPIQVAGILVDLKMDPATVC 72

Query: 194 AGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDL 253
           AG LHD VEDT V T   + E FG  V  IV+G TK+SK+       +  S Q   A++ 
Sbjct: 73  AGFLHDVVEDTPV-TLGDLAELFGKDVEIIVDGVTKLSKI-------QYKSHQQQLAENH 124

Query: 254 RQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIK 313
           R++ LAM++++RVIIVKLADRLHNMRTLSH+ P KQ  IA ETL+++APLA  LG+  IK
Sbjct: 125 RKLLLAMSKDLRVIIVKLADRLHNMRTLSHLRPDKQRRIANETLEIYAPLADRLGISTIK 184

Query: 314 SELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEI 373
            ELE++S  Y N + Y ++   +     E  + +++A   + K I D      + V  EI
Sbjct: 185 WELEDVSLRYLNPQQYYRIVHLMNSKRTERVQYIDKAIVDIKKSIAD------LNVDCEI 238

Query: 374 RSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVH 433
               K  YSIY+ +       +++  +  +R+I+               + CY VLG +H
Sbjct: 239 YGRPKHIYSIYRKMKDQHKQFSQIYDLLAVRVIV------------HSIKDCYAVLGAIH 286

Query: 434 GIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMDLIAER 488
             W P+P   KDYIA PK N YQSLHTT+I     PF        EVQIRT EM  +AE 
Sbjct: 287 TQWKPMPGRFKDYIAMPKANMYQSLHTTVIGPKGQPF--------EVQIRTSEMHRVAEY 338

Query: 489 GIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMT 548
           GIAAH++ +                  GKT  + N +   +++W   I E Q+E   +  
Sbjct: 339 GIAAHWAYK-----------------EGKTEAVANDDTGTKLNWFKEIIELQDE---SSD 378

Query: 549 SREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLV 608
           + EFV+++  DL G RV+VFTP+G++  LPKGA  +D AY IHTEIGNK V  KVNG +V
Sbjct: 379 AAEFVESVKGDLFGDRVYVFTPKGDVFELPKGAGPLDMAYSIHTEIGNKTVGTKVNGKMV 438

Query: 609 SPTHVLANAEVVEIIT 624
              + + N ++V+I+T
Sbjct: 439 PLDYQVKNGDIVDILT 454


>gi|197303672|ref|ZP_03168709.1| hypothetical protein RUMLAC_02399 [Ruminococcus lactaris ATCC
           29176]
 gi|197297192|gb|EDY31755.1| RelA/SpoT family protein [Ruminococcus lactaris ATCC 29176]
          Length = 774

 Score =  337 bits (865), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 201/507 (39%), Positives = 297/507 (58%), Gaps = 60/507 (11%)

Query: 126 SPERLWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
            PE+L++ L   +    P+ ++ ++ +A  +  EAH  Q R+SGEP+IIHP+ V  IL E
Sbjct: 36  DPEQLYQALIARVRKYHPSADITMIEKAYRIGKEAHKDQVRKSGEPYIIHPLWVGIILAE 95

Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
           LE+D E+I AG+LHD VEDT + T + I  EFG  V  +V+G   V+KLG+L    +   
Sbjct: 96  LEMDKETIVAGMLHDVVEDTEM-TLDDITREFGEEVALLVDG---VTKLGQLSYSQDKLE 151

Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
           VQ   A++LR+MFLAM +++RVII+KLADRLHNMRTL  M   KQ   A ET+ ++AP+A
Sbjct: 152 VQ---AENLRKMFLAMAKDIRVIIIKLADRLHNMRTLEFMTEAKQKEKARETMDIYAPIA 208

Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
           + LG+ +IK+EL++LS  Y   E Y ++   V DL     +  E   +I+    E  + +
Sbjct: 209 QRLGISKIKTELDDLSLKYYQPEVYYQL---VKDLNARKTEREEFVQQIVA---EVSKHM 262

Query: 365 DLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
           +  ++K ++    K  +SIYK ++    ++++V  +  +RII+               + 
Sbjct: 263 ENASIKAKVYGRVKHFFSIYKKMVNQNKTLDQVYDLFAVRIIV------------DSVKD 310

Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRT 479
           CY  LG++H ++TPIP   KDYIA PK N YQSLHTTL+     PF        E+QIRT
Sbjct: 311 CYAALGVIHEMYTPIPGRFKDYIAMPKANMYQSLHTTLMGPAGQPF--------EIQIRT 362

Query: 480 EEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREW 539
           EEM   AE GIAAH+           +    G + +G    LN+     +++WL  I EW
Sbjct: 363 EEMHKTAEYGIAAHWK----------YKETGGSNAKG----LNSQE--EKLNWLRQILEW 406

Query: 540 QEEFVGNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNK 597
           Q +   N   REF+  +    DL    V+ FTP G++KNLP G+T VD+AY IH+ +GNK
Sbjct: 407 QRDMSDN---REFLSLLKGDLDLFQEDVYCFTPNGDVKNLPNGSTPVDFAYAIHSAVGNK 463

Query: 598 MVAAKVNGNLVSPTHVLANAEVVEIIT 624
           M+ A+VNG LV+  + + N + +EI+T
Sbjct: 464 MIGARVNGRLVNIDYKIQNGDRIEILT 490


>gi|392429319|ref|YP_006470333.1| GTP pyrophosphokinase [Streptococcus intermedius JTH08]
 gi|419776206|ref|ZP_14302129.1| GTP diphosphokinase [Streptococcus intermedius SK54]
 gi|423071137|ref|ZP_17059912.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           intermedius F0413]
 gi|355364499|gb|EHG12231.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           intermedius F0413]
 gi|383846414|gb|EID83813.1| GTP diphosphokinase [Streptococcus intermedius SK54]
 gi|391758468|dbj|BAM24085.1| GTP pyrophosphokinase [Streptococcus intermedius JTH08]
          Length = 738

 Score =  337 bits (865), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 192/494 (38%), Positives = 294/494 (59%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YLSP ++ LV++AL+ A + H GQ R+SGEP+IIHP++VA IL +L+LD  S+A G 
Sbjct: 16  TKKYLSPEDVALVQKALVYAVDRHRGQFRQSGEPYIIHPIQVAGILAKLKLDAISVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDTN  T + ++ EFG  VR IV+G   V+KLGK+K  +    +    A++ R+M
Sbjct: 76  LHDVVEDTNA-TLDDLDREFGHDVRGIVDG---VTKLGKVKYMSHEEQL----AENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM++++RVI+VKLADRLHNMRTL H+   KQ  I+ ET++++APLA  LG+  +K EL
Sbjct: 128 LMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISSVKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+L+F Y N  ++ K    ++ L KE  +E EE    +++KIE   +     ++  I   
Sbjct: 188 EDLAFRYLNPTEFYK----ISHLMKEKRREREELVDEVVRKIE--TYASDRNLRGNIYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSIY+ +   +   +E+  +  +R I+              Q   Y +LG +H +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFDEIYDLIAIRCIL------------DTQSDVYAMLGYIHELW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA  K NGYQS+HTT    +Y     +E QIRT+EM  +AE G+AAH++ 
Sbjct: 290 RPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  + G V                 ++   A+ ++W+  + E Q++   +  +++FVD++
Sbjct: 346 KKGIKGQV-----------------DSKESAIGMNWIKEMMELQDQ---SNDAQDFVDSV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             + L   ++VFTP G +++LPK +  +D+AY IHT++G K V AKVNG +V  T  L  
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKAVGAKVNGRMVPLTTKLKT 445

Query: 617 AEVVEIITYNVSFS 630
            + VEI+T   SF 
Sbjct: 446 GDQVEIVTSTNSFG 459


>gi|295692846|ref|YP_003601456.1| GTP pyrophosphokinase [Lactobacillus crispatus ST1]
 gi|295030952|emb|CBL50431.1| GTP pyrophosphokinase [Lactobacillus crispatus ST1]
          Length = 746

 Score =  337 bits (865), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 195/485 (40%), Positives = 283/485 (58%), Gaps = 49/485 (10%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++ +++  V +A   A +AH GQKR SG+P+IIHP +VA  L  L LD +++AAG LHD
Sbjct: 19  YMNDDQVAFVEKAYEFANKAHAGQKRASGQPYIIHPTQVAGTLATLGLDPDTVAAGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
           TVEDT  VT + ++E+FG  V  IV+G TK++K        E  S Q+  A++ R+M +A
Sbjct: 79  TVEDT-PVTNDELKEKFGEDVAFIVDGVTKLNKY-------EYKSHQEFLAENHRKMLIA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M +++RVI+VKLADRLHNM TL H+ P KQ  IA+ET+ ++APLA  LG+  IK ELE++
Sbjct: 131 MAQDLRVIMVKLADRLHNMHTLQHLRPDKQRRIASETMDIYAPLADRLGIGTIKWELEDM 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           SF Y N E Y ++   +     + EK + +  K L K       LD + +K EI    K 
Sbjct: 191 SFHYLNPEAYYRIVNLMDVKRSQREKYIADTIKTLKKT------LDELGIKYEIYGRPKH 244

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIYK ++      +E+  +  +R+I+K              + CY VLG VH  W P+
Sbjct: 245 IYSIYKKMVNKHKDFDEIYDLLAVRVIVK------------NVRDCYAVLGAVHTEWKPM 292

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK NGYQSLHTT+I         LE+QIRTE+M  +AE G+AAH++ +  
Sbjct: 293 PGRFKDYIAMPKVNGYQSLHTTIIG---PGGRPLEIQIRTEQMHKVAEYGVAAHWAYK-- 347

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
                          RG    +  +    ++  +  I E ++E      + EF+ ++  D
Sbjct: 348 ---------------RGNFTGVEQSTSGEKLDMVREILELKDE---TKDAGEFMKSVKSD 389

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           +   RV+VFTP+GE+  LPKG+  +D+AY IHT++G+  V AKVN  LV   + L N +V
Sbjct: 390 IFSDRVYVFTPKGEVYELPKGSVTLDFAYAIHTQVGSHAVGAKVNNKLVPLDYKLRNGDV 449

Query: 620 VEIIT 624
           +EI+T
Sbjct: 450 IEIMT 454


>gi|426403554|ref|YP_007022525.1| GTP pyrophosphokinase [Bdellovibrio bacteriovorus str. Tiberius]
 gi|425860222|gb|AFY01258.1| GTP pyrophosphokinase [Bdellovibrio bacteriovorus str. Tiberius]
          Length = 738

 Score =  337 bits (865), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 191/508 (37%), Positives = 293/508 (57%), Gaps = 56/508 (11%)

Query: 122 FKEDS----PERLWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPV 176
            KED     P +  +DL   I    PN +L+++ +A   + + H+GQ RRSGEP+I HP+
Sbjct: 5   LKEDGLTNKPVKTVDDLLARIRIYYPNADLKIIEKAYSFSEKMHEGQIRRSGEPYISHPL 64

Query: 177 EVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKL 236
            VA IL +  LD ++IA GLLHDTVEDT   T E I  EFG  +  +V+G   V+K+G++
Sbjct: 65  SVAAILADFHLDLDTIATGLLHDTVEDT-AATLEDIRTEFGDVIAHLVDG---VTKIGQM 120

Query: 237 KCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATET 296
           K KN +      + +++R+M +AM ++VRV++VKLADRLHNMRTL+ MP  KQ  IA ET
Sbjct: 121 KFKNSHEK----QGENIRKMIVAMGKDVRVVLVKLADRLHNMRTLNFMPFEKQERIALET 176

Query: 297 LQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMK 356
           L+++ PLA  +G+  +K ELE+L F Y   + Y ++ +++     E  + ++E   ++ K
Sbjct: 177 LEIYCPLAGRMGISALKIELEDLCFRYYRPDMYYELVQQIKKTESEQNRYIDEVKVLIGK 236

Query: 357 KIEDDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVG 416
           ++    F      + E+    K  +SIY+ +       ++V  +   R++++        
Sbjct: 237 ELNKAGF------RYEVYGRSKHLWSIYRKMQSRNIDYDQVYDVLAFRVLVESVAE---- 286

Query: 417 PLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQ 476
                   CY  LGLVH +W PIP   KD+IA PK N YQSLHTT++    E   R+E+Q
Sbjct: 287 --------CYAALGLVHSLWKPIPGRFKDFIAMPKANNYQSLHTTVMGPGGE---RIEIQ 335

Query: 477 IRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAI 536
           IRT EM L+AE+GIAAH+  +                 RGK V  ++   A   +WL  +
Sbjct: 336 IRTSEMHLVAEKGIAAHWKYK----------------ERGKMVDDSDLQQA---NWLRDL 376

Query: 537 REWQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGN 596
             W +         EF+DT+  DL  + ++VFTP G+++  P+GAT VD+A+ +HTE+GN
Sbjct: 377 VSWHQNV---RNPDEFLDTVKTDLFETEIYVFTPTGDVREFPEGATPVDFAFAVHTELGN 433

Query: 597 KMVAAKVNGNLVSPTHVLANAEVVEIIT 624
           ++V A+VNG +V   + L N + VE++T
Sbjct: 434 RIVGARVNGKMVPLKYQLQNGDTVEVVT 461


>gi|385813969|ref|YP_005850362.1| PpGpp synthetase [Lactobacillus helveticus H10]
 gi|323466688|gb|ADX70375.1| PpGpp synthetase [Lactobacillus helveticus H10]
          Length = 749

 Score =  337 bits (864), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 196/485 (40%), Positives = 282/485 (58%), Gaps = 49/485 (10%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++ +++  V +A   A +AH GQKR SG+P+IIHP +VA  L  L LD ++I AG LHD
Sbjct: 22  YMNDDQVAFVEKAYEFANKAHAGQKRASGQPYIIHPTQVAGTLATLGLDPDTIVAGFLHD 81

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
           TVEDT  VT + ++E+FG  V  IV+G TK++K        E  S Q+  A++ R+M +A
Sbjct: 82  TVEDT-PVTNDELKEKFGEDVAFIVDGVTKLNKY-------EYKSHQEFLAENHRKMLIA 133

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M +++RVI+VKLADRLHNM TL H+ P KQ  IA+ET+ ++APLA  LG+  IK ELE++
Sbjct: 134 MAKDLRVIMVKLADRLHNMHTLQHLRPDKQRRIASETMDIYAPLADRLGIGTIKWELEDM 193

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           SF Y N E Y ++   +     + EK + +  K L K       LD + +K EI    K 
Sbjct: 194 SFHYLNPEAYYRIVNLMDVKRSQREKYIADTIKTLKKT------LDELGIKYEIYGRPKH 247

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIYK ++      +E+  +  +R+I+K              + CY VLG VH  W PI
Sbjct: 248 IYSIYKKMVNKHKDFDEIYDLLAVRVIVK------------NVRDCYAVLGAVHTEWKPI 295

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK NGYQSLHTT+I         LE+QIRTE+M  +AE G+AAH++ +  
Sbjct: 296 PGRFKDYIAMPKVNGYQSLHTTIIG---PGGRPLEIQIRTEQMHEVAEYGVAAHWAYK-- 350

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
                          RG    +  ++   ++  +  I E ++E      + EF+ ++  D
Sbjct: 351 ---------------RGNFTGVQESSSGEKLDMVREILELKDE---TKDAGEFMKSVKSD 392

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           +   RV+VFTP+GE+  LP G+  +D+AY IHT++GN  V AKVN  LV   + L N +V
Sbjct: 393 IFSDRVYVFTPKGEVYELPNGSVTLDFAYAIHTQVGNHAVGAKVNNKLVPLDYKLRNGDV 452

Query: 620 VEIIT 624
           +EI+T
Sbjct: 453 IEIMT 457


>gi|116629512|ref|YP_814684.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
           [Lactobacillus gasseri ATCC 33323]
 gi|282852110|ref|ZP_06261468.1| GTP diphosphokinase [Lactobacillus gasseri 224-1]
 gi|311110845|ref|ZP_07712242.1| GTP diphosphokinase [Lactobacillus gasseri MV-22]
 gi|420147336|ref|ZP_14654612.1| GTP diphosphokinase [Lactobacillus gasseri CECT 5714]
 gi|116095094|gb|ABJ60246.1| Guanosine polyphosphate pyrophosphohydrolase/synthetase
           [Lactobacillus gasseri ATCC 33323]
 gi|282556870|gb|EFB62474.1| GTP diphosphokinase [Lactobacillus gasseri 224-1]
 gi|311065999|gb|EFQ46339.1| GTP diphosphokinase [Lactobacillus gasseri MV-22]
 gi|398401337|gb|EJN54839.1| GTP diphosphokinase [Lactobacillus gasseri CECT 5714]
          Length = 750

 Score =  337 bits (864), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 197/485 (40%), Positives = 281/485 (57%), Gaps = 47/485 (9%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++   L  V  A   A  AH+GQ R SG+P+IIHP +VA  L  L LD +++AAG LHD
Sbjct: 19  YMNDEHLAFVESAYEFAKNAHEGQFRVSGQPYIIHPTQVAGTLATLRLDPDTVAAGYLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
           TVEDT  VT + I+E+FG  V  IV+G   V+KL K++ K+++H  ++  AD+ R+M +A
Sbjct: 79  TVEDT-PVTNDDIKEKFGKDVAFIVDG---VTKLSKIQYKSKSH--EEYLADNHRKMLIA 132

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M +++RVI+VKLADRLHNM TL H+ P KQ  IA ETL ++APLA  LG+  IK ELE++
Sbjct: 133 MAKDLRVIMVKLADRLHNMHTLDHLRPDKQRRIADETLDIYAPLADRLGIGTIKWELEDM 192

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           S  Y N + Y ++   +     E E  + +A K L       Q LD + ++ EI    K 
Sbjct: 193 SLHYLNPQQYYRIVNLMQSKRSEREGYIADAIKTLK------QTLDSLGIEYEIYGRPKH 246

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIYK ++      +E+  +  +R+I+K              + CY VLG VH  W P+
Sbjct: 247 IYSIYKKMVNKHKDFSEIYDLLAVRVIVK------------SVRDCYAVLGAVHTKWKPM 294

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK NGYQSLHTT+I         LE+QIRTE M  +AE G+AAH++ +  
Sbjct: 295 PGRFKDYIAVPKVNGYQSLHTTIIG---PGGKPLEIQIRTEAMHQVAEYGVAAHWAYKEG 351

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
           V G V     N                  +++    I E Q E      S EF+ ++  D
Sbjct: 352 VKGEVEQTDANK-----------------KLNMFQEILELQNE---TKDSHEFMKSVKTD 391

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           +   RV+VFTP+G++  LPKG+  +D+AYM+H+E+G   V A++NG +V   + L N +V
Sbjct: 392 IFSDRVYVFTPKGDVYELPKGSVPLDFAYMVHSEVGAHSVGARINGKIVPLDYKLKNGDV 451

Query: 620 VEIIT 624
           VE++T
Sbjct: 452 VEMLT 456


>gi|312143973|ref|YP_003995419.1| (p)ppGpp synthetase I SpoT/RelA [Halanaerobium hydrogeniformans]
 gi|311904624|gb|ADQ15065.1| (p)ppGpp synthetase I, SpoT/RelA [Halanaerobium hydrogeniformans]
          Length = 715

 Score =  337 bits (864), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 200/486 (41%), Positives = 292/486 (60%), Gaps = 52/486 (10%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           SY+   +L+LV +A   A +AH+GQ R SGEPF+ HP+ VA IL +LELD  SI A ++H
Sbjct: 12  SYMDEPDLDLVIKAYNYAKKAHEGQYRVSGEPFVDHPLGVAMILADLELDIISIVASMMH 71

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT + T E I +EFG  V  IVEG TK++++ + K K      +D +A+ LR+MF+
Sbjct: 72  DVVEDTEI-TSEDIRKEFGDEVAHIVEGVTKLTRM-QFKTK------EDQQAESLRKMFV 123

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM E++RV+++KLADRLHNMRTL+++   K+   + ETL+++APLA  LGM ++K ELE+
Sbjct: 124 AMAEDIRVVLIKLADRLHNMRTLNYLKKEKRKEKSRETLEIYAPLAHRLGMSKLKWELED 183

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
           L F Y   + Y +V  +V    ++ EK ++EA + L + +E         +++EI    K
Sbjct: 184 LCFRYLKPDMYYEVSHKVQTNREQREKSIQEAIEKLKETLEKHD------IESEIYGRPK 237

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             +SIY  + +     +E+  +  +R+            L    + CY VLG++H IW P
Sbjct: 238 HLFSIYNKMKRKEVEFDEIYDLTAVRV------------LVENVKECYEVLGIIHEIWKP 285

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PK N YQSLHTT+I     S   LEVQIRT +M   AE GIAAH+    
Sbjct: 286 MPGRFKDYIAMPKSNMYQSLHTTVIA---PSGDPLEVQIRTYDMHKTAEYGIAAHWR--- 339

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
           +  G VG                 +     ++SWL  + EWQ++       +EF++T+  
Sbjct: 340 YKEGKVG-----------------DEKFEEKLSWLRRLLEWQKDL---QEPQEFMETLKI 379

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           DL    VFVFTP+G++ +LPKG T VD+AY IHTE+G++ V AKVNG +V   + L N++
Sbjct: 380 DLFEDEVFVFTPQGDVVSLPKGGTPVDFAYYIHTEVGHRCVGAKVNGKIVPLEYKLENSD 439

Query: 619 VVEIIT 624
           +VEI+T
Sbjct: 440 IVEILT 445


>gi|222100829|ref|YP_002535397.1| (P)ppGpp synthetase [Thermotoga neapolitana DSM 4359]
 gi|221573219|gb|ACM24031.1| (P)ppGpp synthetase [Thermotoga neapolitana DSM 4359]
          Length = 714

 Score =  337 bits (864), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 199/485 (41%), Positives = 283/485 (58%), Gaps = 52/485 (10%)

Query: 141 LSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDT 200
            S  E  L+ +A   A+  H+GQKR SG+PFI HPVEVA+IL EL +D  ++AA LLHDT
Sbjct: 26  FSREEKRLLMKAYEFAWIVHEGQKRFSGDPFISHPVEVAKILAELGVDSTTLAAALLHDT 85

Query: 201 VEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAM 260
           +ED   V+ ++I+E FG  + RIV+G TKVS +      +++      + + +++MFLAM
Sbjct: 86  IEDGEGVSLDQIKELFGNEIARIVDGVTKVSSINAPVGPDQDSR---KRMETIQKMFLAM 142

Query: 261 TEEVRVIIVKLADRLHNMRTLSHMP-PHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
            E++RVI VKLADRLHNMRT+ ++  P K+   A ETL+V+APLA  LG+Y IKSELE+L
Sbjct: 143 AEDMRVIFVKLADRLHNMRTIQYVQDPEKKKYKAYETLEVYAPLAHKLGIYSIKSELEDL 202

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           +F     E+Y ++K  VA+  KE EK   E   IL   +E+ +      +K  +    K 
Sbjct: 203 AFKVLYPEEYYRIKELVAEKKKEREKRTNEYISILKSALEEHR------IKATVEGRYKH 256

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSI++ + +      E+  +  LR+++K                CY VLG+VH IW P+
Sbjct: 257 YYSIWRKMKEKGKKFEEIYDLIALRVVVKDVTT------------CYTVLGIVHNIWKPL 304

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK NGY+SLHTT+I    E    LE+QIR EEM   AE G+ AH+     
Sbjct: 305 PGRFKDYIAAPKSNGYRSLHTTVITGYGEP---LEIQIRDEEMHREAEYGLIAHW----- 356

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
               +   +P+ ++ +                W+  + +W++E     T  EF D I ++
Sbjct: 357 ----IYKEKPDVKTAK---------------EWIERLLDWRKELAQGFT--EFED-IKKE 394

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           L    VFVFTP+G+I +LPKGAT +D+AY IHTE+G+    AKVNG +V   + L N +V
Sbjct: 395 LQMDEVFVFTPKGDIIHLPKGATPIDFAYAIHTEVGHHYSGAKVNGKIVPIDYQLKNGDV 454

Query: 620 VEIIT 624
           VEII 
Sbjct: 455 VEIIV 459


>gi|253682203|ref|ZP_04863000.1| GTP pyrophosphokinase [Clostridium botulinum D str. 1873]
 gi|253561915|gb|EES91367.1| GTP pyrophosphokinase [Clostridium botulinum D str. 1873]
          Length = 730

 Score =  337 bits (864), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 201/502 (40%), Positives = 297/502 (59%), Gaps = 63/502 (12%)

Query: 130 LWEDLRPTISYLSPNEL--ELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELEL 187
           + EDL   I Y + N +  +++ +A   A  AH  QKR SGEP+IIHPVEVA IL E+ L
Sbjct: 1   MLEDLLQKI-YENCNNINKDIIIKAYNYAENAHKEQKRISGEPYIIHPVEVACILAEMGL 59

Query: 188 DWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQD 247
           D  +IAA LLHD +EDT+  T+E +E++F   V  +VEG   V+KLGK+K K +    ++
Sbjct: 60  DENTIAASLLHDVIEDTDY-TYEDVEKDFNIEVANLVEG---VTKLGKIKFKTK----EE 111

Query: 248 VKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLL 307
            +++++R+M LAMT+++RVI++KLADRLHNMRTL +M   KQ   A ETL ++APLA  L
Sbjct: 112 QQSENVRKMLLAMTKDIRVILIKLADRLHNMRTLKYMSVEKQKEKAKETLDIYAPLAHRL 171

Query: 308 GMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLM 367
           G+ +IK ELE+LS  Y N  +Y  + R+VA+  KE E+ +E     L +K+E+       
Sbjct: 172 GISKIKWELEDLSLRYLNPNEYYDLVRKVAEKRKEREEYIERIIHELSEKLEE------A 225

Query: 368 TVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYH 427
            +K+EI    K  YSIY+ ++    +I+++  +  +RI            L    + CY 
Sbjct: 226 GIKSEIEGRPKHFYSIYRKMVIKNKTIDQIFDLTAIRI------------LVEDVKDCYA 273

Query: 428 VLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEM 482
           VLG+VH ++ PIP   KDYIA PKPN YQSLH+T+I     PF        E+QIRT EM
Sbjct: 274 VLGMVHTMYKPIPGRFKDYIAMPKPNMYQSLHSTVIGPQGKPF--------EIQIRTYEM 325

Query: 483 DLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEE 542
              +E GIAAH+    +  G + ++               + +   +++WL  + EWQ E
Sbjct: 326 HNTSEYGIAAHWK---YKEGNLKNS---------------DKDFEAKLAWLREVLEWQRE 367

Query: 543 FVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAK 602
                   EF++    D+    VFVFTP+G++ NLP  +T +D+AY IHT+IG++ +  K
Sbjct: 368 ---TSNPEEFMEDFKIDMFSDEVFVFTPKGDVINLPSDSTPIDFAYRIHTDIGHRCIGGK 424

Query: 603 VNGNLVSPTHVLANAEVVEIIT 624
           VNG +V   + L   E+VE++T
Sbjct: 425 VNGKIVPLDYHLKTGEIVEVLT 446


>gi|385799597|ref|YP_005836001.1| (p)ppGpp synthetase I SpoT/RelA [Halanaerobium praevalens DSM 2228]
 gi|309388961|gb|ADO76841.1| (p)ppGpp synthetase I, SpoT/RelA [Halanaerobium praevalens DSM
           2228]
          Length = 715

 Score =  337 bits (864), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 201/485 (41%), Positives = 291/485 (60%), Gaps = 52/485 (10%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y+    L+LV++A   A +AH  Q R SGEPF+ HP+ V+ IL ELELD  SI + LLHD
Sbjct: 13  YMDEPNLDLVKKAYSYAEKAHKEQYRVSGEPFVEHPLGVSIILAELELDIVSIVSSLLHD 72

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            VEDT+V + E IE+EFGA V  IV+G TK++++ + K K       D +A+ LR+MF+A
Sbjct: 73  VVEDTSVSSQE-IEKEFGAEVAHIVDGVTKLTRM-QFKTK------ADQQAESLRKMFVA 124

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M E++RV+++KLADRLHNMRTL+++   K+   + ET++++APLA  LGM +IK ELE+L
Sbjct: 125 MAEDIRVVLIKLADRLHNMRTLNYLKKAKRKEKSRETIEIYAPLAHRLGMSKIKWELEDL 184

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           SF Y   + Y ++  +V    K+ EK+++EA + L      +  L+  +++ +I    K 
Sbjct: 185 SFRYLKPDMYYEISHKVQANRKQREKDIKEAIEKL------NLTLESHSIEADIYGRPKH 238

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIY  + +     +E+  +  +R+            L    + CY VLG++H IW P+
Sbjct: 239 LYSIYNKMKRKEVEFDEIYDLTAVRV------------LVENVKECYEVLGVLHEIWKPM 286

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK N YQSLHTT+I     +   LEVQIRT EM   AE GIAAH+    +
Sbjct: 287 PGRFKDYIAMPKSNMYQSLHTTVIA---PNGDPLEVQIRTYEMHKTAEYGIAAHWR---Y 340

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
             G VG                 +     ++SWL  + EWQ++       +EF++T+  D
Sbjct: 341 KEGKVG-----------------DEKFEEKLSWLRRLLEWQKDL---QEPQEFMETLKID 380

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           L    VFVFTP G++ +LPK AT VD+AY IHTE+G+K V AKVN  +V   + L N+++
Sbjct: 381 LFEDEVFVFTPAGDVVSLPKEATPVDFAYYIHTEVGHKCVGAKVNSKIVPLEYKLENSDI 440

Query: 620 VEIIT 624
           VEI+T
Sbjct: 441 VEILT 445


>gi|291522836|emb|CBK81129.1| (p)ppGpp synthetase, RelA/SpoT family [Coprococcus catus GD/7]
          Length = 770

 Score =  337 bits (864), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 198/508 (38%), Positives = 298/508 (58%), Gaps = 61/508 (12%)

Query: 125 DSPERLWEDLRPTISYLSP-NELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILG 183
           +SP+ L++ L   +    P +++ ++ +A  +A  AH GQ R+SGEP+IIHP+ VA IL 
Sbjct: 27  ESPKVLYQRLINKVKEYHPSDDISMIEKAYNIANNAHKGQLRKSGEPYIIHPLCVALILA 86

Query: 184 ELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENH 243
           +LELD E+I  GLLHD VEDT ++T E I  EF A +  IV G TK+ +L   K K E  
Sbjct: 87  DLELDKETIVGGLLHDVVEDT-IMTEEDITREFSAEIALIVSGVTKLGQLSYSKDKVE-- 143

Query: 244 SVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPL 303
               ++A++LR+MFLAM +++RVI++KLADRLHNMRTL +M P KQ   A ET+ ++AP+
Sbjct: 144 ----IQAENLRKMFLAMAKDIRVILIKLADRLHNMRTLKYMTPAKQKEKARETMDIYAPI 199

Query: 304 AKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQF 363
           A+ LG+ +IK EL++LS  Y   E Y  + R++ +L +   +   +A   +++++   Q 
Sbjct: 200 AQRLGISKIKIELDDLSLRYLEPEVYYDLARQI-NLKRSERQAFVDA---IVEEVS--QH 253

Query: 364 LDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQ 423
           +    +K ++    K  +SIYK ++    +++E+  +  +RII+               +
Sbjct: 254 MAQSGIKAQVNGRVKHFFSIYKKMVNQDKTLDEIYDLFAVRIIV------------DTVK 301

Query: 424 ICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIR 478
            CY  LG++H ++ PIP   KDYIA PK N YQSLHTTLI     PF        E+QIR
Sbjct: 302 DCYAALGIIHEMYKPIPGRFKDYIAMPKQNMYQSLHTTLIGPNGQPF--------EIQIR 353

Query: 479 TEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIRE 538
           T +M   AE GIAAH+  +                P  K V     +   +++WL  I E
Sbjct: 354 TFDMHRTAEYGIAAHWKYK--------------EDPNAKNV---EDSEEAKLTWLRQILE 396

Query: 539 WQEEFVGNMTSREFVDTITRD--LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGN 596
           WQ +   N   +EF+  +  D  L    V+ FTP G++KNLP G+T +D+AY IH+ +GN
Sbjct: 397 WQTDMSDN---KEFMSLLKNDLNLFADSVYCFTPAGDVKNLPTGSTPIDFAYSIHSAVGN 453

Query: 597 KMVAAKVNGNLVSPTHVLANAEVVEIIT 624
           KMV A+VNG LV+  +V+ N + VE++T
Sbjct: 454 KMVGARVNGKLVNIDYVIKNGDRVEVLT 481


>gi|291549196|emb|CBL25458.1| (p)ppGpp synthetase, RelA/SpoT family [Ruminococcus torques L2-14]
          Length = 773

 Score =  337 bits (863), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 201/507 (39%), Positives = 296/507 (58%), Gaps = 60/507 (11%)

Query: 126 SPERLWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
            PE L++ L   +    P+ ++ ++ +A  +  EAH  Q R+SGEP+IIHP+ VA IL +
Sbjct: 36  DPEELYQALIARVRKYHPSADITMIEKAYQIGKEAHKNQFRKSGEPYIIHPLWVAIILAD 95

Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
           LE+D E+I AG+LHD VEDT  +T + I  EFG  V  +V+G   V+KLG+L   N +  
Sbjct: 96  LEMDKETIVAGMLHDVVEDT-TMTLDEISAEFGEEVALLVDG---VTKLGQL---NYSQD 148

Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
             + +A++LR+MFLAM +++RVIIVKLADRLHNMRT+  M P KQ   + ET+ ++AP+A
Sbjct: 149 KLEAQAENLRKMFLAMAKDIRVIIVKLADRLHNMRTMEFMTPAKQKEKSRETMDIYAPIA 208

Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
           + LG+ +IK+EL++LS  Y   E Y ++   V DL     +  E   +I+    E  + +
Sbjct: 209 QRLGISKIKTELDDLSLKYYQPEVYNQL---VHDLNARKTEREEFVQQIVA---EVSKHM 262

Query: 365 DLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
               ++ ++    K  +SIYK ++    ++++V  +  +RII+               + 
Sbjct: 263 KNADIEAKVYGRVKHFFSIYKKMVNQNKTLDQVYDLFAVRIIV------------DSVKD 310

Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRT 479
           CY  LG++H ++TPIP   KDYIA PK N YQSLHTTLI     PF        E+QIRT
Sbjct: 311 CYAALGVIHEMYTPIPGRFKDYIAMPKANMYQSLHTTLIGPSGQPF--------EIQIRT 362

Query: 480 EEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREW 539
           EEM   AE GIAAH+           +    G + +G    LN      +++WL  I EW
Sbjct: 363 EEMHKTAEYGIAAHWK----------YKETGGSNTKG----LNTQE--EKLNWLRQILEW 406

Query: 540 QEEFVGNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNK 597
           Q +   N   REF+  +    DL    V+ FTP G++KNLP G+T VD+AY IH+ +GNK
Sbjct: 407 QRDMSDN---REFLSLLKGDLDLFQEDVYCFTPNGDVKNLPNGSTPVDFAYAIHSAVGNK 463

Query: 598 MVAAKVNGNLVSPTHVLANAEVVEIIT 624
           MV A+VNG LV+  + + N + +EI+T
Sbjct: 464 MVGARVNGKLVNIDYKIQNGDRIEILT 490


>gi|160947570|ref|ZP_02094737.1| hypothetical protein PEPMIC_01505 [Parvimonas micra ATCC 33270]
 gi|158446704|gb|EDP23699.1| RelA/SpoT family protein [Parvimonas micra ATCC 33270]
          Length = 717

 Score =  337 bits (863), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 204/497 (41%), Positives = 282/497 (56%), Gaps = 55/497 (11%)

Query: 130 LWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
           + ++L   I   +PN ++E + +A     E H+GQ R SGEP+ IHPV VA IL +L +D
Sbjct: 1   MLDELLSKIKSYNPNTDVEKITKAYNFTKECHEGQFRNSGEPYFIHPVAVANILADLYMD 60

Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
             +I AGL+HD +EDT V TFE +   FG  +  +V+G   V+KL K+K +    S Q+ 
Sbjct: 61  DATIIAGLMHDILEDTEV-TFEEMSGMFGEEIANLVDG---VTKLKKIKYQ----SKQES 112

Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
           +AD+LR+M LAM  ++RVII+K+ADRLHN+RTL +M   KQ   A ETL+++APLA  LG
Sbjct: 113 QADNLRKMLLAMNSDIRVIIIKIADRLHNIRTLEYMKKAKQLEKAKETLEIYAPLAYRLG 172

Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQF-LDLM 367
           M  +K ELE+LS  Y   E Y  +  RV       +K+  E  KI+   IE+    L   
Sbjct: 173 MSNVKWELEDLSLRYLEPEIYYDLAERV-------KKKRSEREKIINDIIEEISISLKEH 225

Query: 368 TVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYH 427
            ++ EI    K  YSIYK + K   S +E+  +  +RII+         P  S    CY 
Sbjct: 226 NIQGEISGRPKSLYSIYKKMYKQNKSFDEIFDLTAIRIIV---------PTISD---CYA 273

Query: 428 VLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAE 487
           VLG+VH  W PIP   KDYIA PKPN YQSLH TLI     S    EVQIRT EM   AE
Sbjct: 274 VLGIVHSKWKPIPSRFKDYIAVPKPNLYQSLHNTLIS---TSGDVFEVQIRTFEMHRTAE 330

Query: 488 RGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNM 547
            GIAAH+  +  V                ++   ++     +++WL  + +WQ E     
Sbjct: 331 YGIAAHWKYKAGV---------------DRSTSFDD-----KLTWLRQLMDWQREV---N 367

Query: 548 TSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNL 607
            SREF+ +   D +   VFVF+P+G++ NL  GAT +D+AY +HT +GN  V AKV+G +
Sbjct: 368 DSREFITSFKEDFVSDEVFVFSPKGDVINLIAGATPIDFAYKVHTAVGNNCVGAKVDGRI 427

Query: 608 VSPTHVLANAEVVEIIT 624
           V   + L N  +VEI+T
Sbjct: 428 VPLNYKLKNGNIVEILT 444


>gi|42523075|ref|NP_968455.1| GTP pyrophosphokinase [Bdellovibrio bacteriovorus HD100]
 gi|39575280|emb|CAE79448.1| GTP pyrophosphokinase [Bdellovibrio bacteriovorus HD100]
          Length = 738

 Score =  337 bits (863), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 187/501 (37%), Positives = 293/501 (58%), Gaps = 52/501 (10%)

Query: 125 DSPERLWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILG 183
           + P +  +DL   I    PN +L+++ +A   + + H+GQ RRSGEP+I HP+ VA IL 
Sbjct: 12  NKPVKTVDDLLARIRVYYPNADLKIIEKAYSFSEKMHEGQIRRSGEPYISHPLSVAAILA 71

Query: 184 ELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENH 243
           +  LD ++IA GLLHDTVEDT   T E I  EFG  +  +V+G   V+K+G++K KN + 
Sbjct: 72  DFHLDLDTIATGLLHDTVEDT-AATLEDIRREFGDVIAHLVDG---VTKIGQMKFKNSHE 127

Query: 244 SVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPL 303
                + +++R+M +AM ++VRV++VKLADRLHNMRTL+ MP  KQ  IA ETL+++ PL
Sbjct: 128 K----QGENIRKMIVAMGKDVRVVLVKLADRLHNMRTLNFMPFEKQERIALETLEIYCPL 183

Query: 304 AKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQF 363
           A  +G+  +K ELE+L F Y   + Y ++ +++     E  + +EE   ++ K++    F
Sbjct: 184 AGRMGISALKIELEDLCFRYYRPDMYYELVQQIKKTEAEQNRYIEEVKHLIGKELTKAGF 243

Query: 364 LDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQ 423
                 + E+    K  +SIY+ +       ++V  +   R++++               
Sbjct: 244 ------RYEVYGRSKHLWSIYRKMQSRNIDYDQVYDVLAFRVLVESVAE----------- 286

Query: 424 ICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMD 483
            CY  LGLVH +W PIP   KD+IA PK N YQSLHTT++    E   R+E+QIRT EM 
Sbjct: 287 -CYAALGLVHSLWKPIPGRFKDFIAMPKANNYQSLHTTVMGPGGE---RIEIQIRTSEMH 342

Query: 484 LIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEF 543
           L+AE+GIAAH+  +                 RGK   +++ ++  + +WL  +  W +  
Sbjct: 343 LVAEKGIAAHWKYK----------------ERGK--MMDDGDLQ-QANWLRDLVSWHQNV 383

Query: 544 VGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKV 603
                  EF+DT+  DL  + ++VFTP G+++  P+GAT VD+A+ +HTE+GN++V A+V
Sbjct: 384 ---RNPDEFLDTVKTDLFETEIYVFTPTGDVREFPEGATPVDFAFAVHTELGNRIVGARV 440

Query: 604 NGNLVSPTHVLANAEVVEIIT 624
           NG +V   + L N + VE++T
Sbjct: 441 NGKMVPLKYQLQNGDTVEVVT 461


>gi|295094222|emb|CBK83313.1| (p)ppGpp synthetase, RelA/SpoT family [Coprococcus sp. ART55/1]
          Length = 814

 Score =  337 bits (863), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 202/505 (40%), Positives = 291/505 (57%), Gaps = 60/505 (11%)

Query: 127 PERLWEDLRPTI-SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGEL 185
           PE L+++L   I +Y    ++ ++ +A  +A  AH GQ R+SGEP+I+HP+ VA IL EL
Sbjct: 82  PEELYKELISRILTYHPSADITMIEKAYKVADAAHKGQLRKSGEPYIMHPLNVAIILAEL 141

Query: 186 ELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSV 245
           ELD E+I AG+LHD VEDT V+T E I  EF   V  +V+G   V+KL +LK   +   V
Sbjct: 142 ELDKETIVAGILHDVVEDT-VMTSEEIAAEFSEEVAFLVDG---VTKLTQLKMTTDKIEV 197

Query: 246 QDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAK 305
           Q   A++LR+MFL+M +++RVI++KLADRLHN+RTL +  P KQ   A ET+ ++AP+A 
Sbjct: 198 Q---AENLRKMFLSMAKDIRVILIKLADRLHNLRTLQYQSPEKQIEKARETMDIYAPIAH 254

Query: 306 LLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIED-DQFL 364
            LG+ +IK EL++LS MY   + Y  +K ++       +++L E +  + + + D  + +
Sbjct: 255 RLGISKIKVELDDLSMMYLMPDVYKDLKAQI-------DEKLTERDAYIKRVVADVKKHI 307

Query: 365 DLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
           D   ++ EI    K  +SIYK +     +++++  I  +RI +            +  + 
Sbjct: 308 DNAGLEAEIDGRVKHFFSIYKKMKNQNKTLDQIYDIFAVRIKV------------NTVRD 355

Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRT 479
           CY  LG++H ++ PIP   KDYIA PK N YQSLHTTLI     PF        E+QIRT
Sbjct: 356 CYSALGIIHEMYKPIPGRFKDYIAMPKSNMYQSLHTTLIGPEGQPF--------EIQIRT 407

Query: 480 EEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREW 539
            EM   AE GIAAH+  +  +TG V                        ++SWL  I EW
Sbjct: 408 YEMHRTAEYGIAAHWKYKENITGTVMQKEEE------------------KLSWLRQILEW 449

Query: 540 QEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMV 599
           Q +   N     FV T   DL   +V+ FTP G++KNLP G+T +D+AY IHT +GNKMV
Sbjct: 450 QRDTDDNKEFMSFVKT-DLDLFAEQVYCFTPAGDVKNLPSGSTPIDFAYAIHTAVGNKMV 508

Query: 600 AAKVNGNLVSPTHVLANAEVVEIIT 624
            A++NG  V     L N + VEIIT
Sbjct: 509 GARINGRQVPIDTKLNNGDRVEIIT 533


>gi|313123577|ref|YP_004033836.1| GTP pyrophosphokinase [Lactobacillus delbrueckii subsp. bulgaricus
           ND02]
 gi|312280140|gb|ADQ60859.1| GTP pyrophosphokinase [Lactobacillus delbrueckii subsp. bulgaricus
           ND02]
          Length = 753

 Score =  337 bits (863), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 196/485 (40%), Positives = 280/485 (57%), Gaps = 50/485 (10%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++ ++L  V  A   A  AH+GQ R SG+P+I+HP +VA  L  L LD +++AAG LHD
Sbjct: 19  YMTADQLAFVESAYQFAARAHEGQTRASGQPYIVHPTQVAGTLANLGLDPDTVAAGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
           TVEDT+V T + I+E+FGA V  IV+G TK++K        E  S ++  A++ R+M +A
Sbjct: 79  TVEDTSV-TNDDIKEKFGADVAFIVDGVTKLNKY-------EYKSHKEFLAENHRKMLIA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M +++RVI+VKLADRLHNM TL H+ P KQ  IA ETL ++APLA  LG+  IK ELE++
Sbjct: 131 MAKDLRVILVKLADRLHNMHTLEHLRPDKQRRIAAETLDIYAPLADRLGIGTIKWELEDM 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           SF Y N E+Y K+   +     E E  +++A   L         LD + +K +I    K 
Sbjct: 191 SFHYMNPEEYYKIVSMMDAKRSEREDYIKDAIDYLRGT------LDSLGIKYDISGRPKH 244

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIYK ++      NE+  +  +R+I+         P       CY VLG VH  W P+
Sbjct: 245 IYSIYKKMVNKHKDFNEIYDLLAVRVIV---------PTVKD---CYAVLGAVHTKWKPM 292

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK NGYQSLHTT+I         LE+QIRTEEM  +AE G+AAH++ +  
Sbjct: 293 PGRFKDYIAMPKANGYQSLHTTIIG---PGGKPLEIQIRTEEMHKVAEYGVAAHWAYK-- 347

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
                          RG    ++  +       L+  RE  E    +  + EF++ +  D
Sbjct: 348 ---------------RGNFQGVDEKDGGA----LDIGREILELQKDSNNADEFMEAVHSD 388

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           +   +V+VFTP+GE+  LPKG+  +D+AY IHT++G+  + AKVN  LV   + L N +V
Sbjct: 389 IFADKVYVFTPKGEVYELPKGSVTLDFAYAIHTQVGDHGIGAKVNDKLVPLDYKLKNGDV 448

Query: 620 VEIIT 624
           V+I+T
Sbjct: 449 VDILT 453


>gi|313891053|ref|ZP_07824672.1| GTP diphosphokinase [Streptococcus pseudoporcinus SPIN 20026]
 gi|416852055|ref|ZP_11909200.1| RelA/SpoT family protein [Streptococcus pseudoporcinus LQ 940-04]
 gi|313120416|gb|EFR43536.1| GTP diphosphokinase [Streptococcus pseudoporcinus SPIN 20026]
 gi|356739544|gb|EHI64776.1| RelA/SpoT family protein [Streptococcus pseudoporcinus LQ 940-04]
          Length = 739

 Score =  337 bits (863), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 188/493 (38%), Positives = 295/493 (59%), Gaps = 51/493 (10%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           +Y++ N++  V++AL  A  AH  Q R+SGEP+IIHP++VA IL +L+LD  ++A G LH
Sbjct: 18  AYMNHNDVAFVKKALDYATAAHYYQARKSGEPYIIHPIQVAGILADLQLDAVTVACGFLH 77

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT++ T + IE +FG+ VR IV+G   V+KLGK++ K+    +    A++ R+M +
Sbjct: 78  DVVEDTDI-TLDNIEMDFGSDVRDIVDG---VTKLGKVEYKSHEEQL----AENHRKMLM 129

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM++++RVI+VKLADRLHNMRTL H+   KQ  I+ ET++++APLA  LG+ +IK ELE+
Sbjct: 130 AMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELED 189

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEE-ANKILMKKIEDDQFLDLMTVKTEIRSVC 377
           L+F Y N  ++ K+   + +  +E E  ++E  +KI+    E   + D+      I    
Sbjct: 190 LAFRYLNESEFYKISHMMREKRREREALVDEIVDKIISYTREQGLYGDVYGRPKHI---- 245

Query: 378 KEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWT 437
              YSIY+ +   +   +++  +  +R +++             Q   Y ++G +H +W 
Sbjct: 246 ---YSIYRKMRDKKKRFDQIFDLIAIRCVME------------TQSDVYAMVGYIHELWR 290

Query: 438 PIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGR 497
           P+P   KDYIA PK NGYQS+HTT    +Y     +E+QIRT++M  +AE G+AAH++ +
Sbjct: 291 PMPGRFKDYIAAPKANGYQSIHTT----VYGPKGPIEIQIRTKDMHQVAEYGVAAHWAYK 346

Query: 498 VFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTIT 557
             V G V        S   + V +N         W+N + E Q+    N  +++FVD++ 
Sbjct: 347 KGVKGKV--------SQSDQKVGMN---------WINELVELQD--ASNGDAKDFVDSVK 387

Query: 558 RDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANA 617
            D+   R++VFTP G ++ LPK +  +D+AY IHT++G K   AKVNG +V  T  L   
Sbjct: 388 EDIFSERIYVFTPNGAVQELPKDSGPIDFAYAIHTQVGEKATGAKVNGKMVPLTAKLKTG 447

Query: 618 EVVEIITYNVSFS 630
           +VVEI+T   SF 
Sbjct: 448 DVVEIVTNPNSFG 460


>gi|450068279|ref|ZP_21847090.1| putative stringent response protein [Streptococcus mutans NLML9]
 gi|449207274|gb|EMC07952.1| putative stringent response protein [Streptococcus mutans NLML9]
          Length = 740

 Score =  337 bits (863), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 189/491 (38%), Positives = 289/491 (58%), Gaps = 49/491 (9%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++  ++  V++AL  A E H GQ R+SGEP+IIHP++VA IL +L LD  +++ G LHD
Sbjct: 19  YMNKADIAFVQKALDYATECHSGQFRKSGEPYIIHPIQVAGILADLHLDAITVSCGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            +EDT   T + +E +FG+ V+ IV+G   V+KLGK++ K+    +    A++ R+M +A
Sbjct: 79  VIEDTEA-TLDHLEAKFGSDVKNIVDG---VTKLGKVEYKSHEEQL----AENHRKMLMA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M++++RVI+VKLADRLHNMRTL H+   KQ  I+ ET++++APLA  LG+ +IK ELE+L
Sbjct: 131 MSKDIRVILVKLADRLHNMRTLRHLRKDKQERISRETMEIYAPLAHRLGISRIKWELEDL 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           +F Y N  ++ K    ++ L  E  +E E     ++ KI+   + +   +  EI    K 
Sbjct: 191 AFRYLNEVEFYK----ISHLMNEKRREREALVDDIVDKIK--AYTEKQGLHGEIYGRPKH 244

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIY+ +   +   +++  +  +R I+              Q   Y +LG +H +W P+
Sbjct: 245 IYSIYRKMRDKKKRFDQIYDLIAIRCIL------------DTQSDVYAMLGYIHELWRPM 292

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK NGYQS+HTT    +Y     +EVQIRT EM  +AE G+AAH++ +  
Sbjct: 293 PGRFKDYIANPKANGYQSIHTT----VYGPKGPIEVQIRTHEMHQVAEYGVAAHWAYKKG 348

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
           + G V                 N+   AL ++W+  + E Q+   GN    +FVD++  D
Sbjct: 349 IKGKV-----------------NSQESALGMNWIKELVELQDASNGNAV--DFVDSVKED 389

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           +   R++VFTP G ++ LPK +  +D+AY IHT++G K   AKVNG +V  T  L   +V
Sbjct: 390 IFAERIYVFTPNGAVQELPKDSGPIDFAYAIHTQVGEKATGAKVNGRMVPLTAKLKTGDV 449

Query: 620 VEIITYNVSFS 630
           VEIIT + SF 
Sbjct: 450 VEIITNSNSFG 460


>gi|409351741|ref|ZP_11234324.1| GTP pyrophosphokinase [Lactobacillus equicursoris CIP 110162]
 gi|407876538|emb|CCK86382.1| GTP pyrophosphokinase [Lactobacillus equicursoris CIP 110162]
          Length = 753

 Score =  337 bits (863), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 199/485 (41%), Positives = 281/485 (57%), Gaps = 50/485 (10%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++P++L  V  A   A  AH+GQ R SG+P+I+HP +VA  L  L LD +++AAG LHD
Sbjct: 19  YMTPDQLAFVESAYQFAARAHEGQTRASGQPYIVHPTQVAGTLANLGLDPDTVAAGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
           TVEDT+V T + I+E+FGA V  IV+G TK++K        E  S ++  A++ R+M +A
Sbjct: 79  TVEDTSV-TNDDIKEKFGADVAFIVDGVTKLNKY-------EYKSHKEFLAENHRKMLIA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M +++RVI+VKLADRLHNM TL H+ P KQ  IA ETL ++APLA  LG+  IK ELE++
Sbjct: 131 MAKDLRVILVKLADRLHNMHTLEHLRPDKQRRIAAETLDIYAPLADRLGIGTIKWELEDM 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           SF Y N ++Y K+   +     E E  +++A   L         LD + +  +I    K 
Sbjct: 191 SFHYINPDEYYKIVSMMDAKRSEREGYIKDAIDYLKGT------LDSLGIDYDISGRPKH 244

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIYK ++      NE+  +  +R+I+         P       CY VLG VH  W P+
Sbjct: 245 IYSIYKKMVNKHKDFNEIYDLLAVRVIV---------PTVKD---CYAVLGAVHTKWKPM 292

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK NGYQSLHTT+I         LE+QIRT+EM  +AE G+AAH++    
Sbjct: 293 PGRFKDYIAMPKANGYQSLHTTIIG---PGGKPLEIQIRTKEMHEVAEYGVAAHWA---- 345

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
                 + R N      K         AL IS    I E Q+E   +  + EF+  +  D
Sbjct: 346 ------YKRGNFDGVEAKEGG------ALDIS--REILELQKE---SSNADEFMQAVHSD 388

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           +   +V+VFTP+GE+  LPKG+  +D+AY IHT++G+  + AKVN  LV   + L N +V
Sbjct: 389 IFSDKVYVFTPKGEVYELPKGSVTLDFAYAIHTQVGDHAIGAKVNDKLVPLDYKLKNGDV 448

Query: 620 VEIIT 624
           V+I+T
Sbjct: 449 VDILT 453


>gi|161507422|ref|YP_001577376.1| ppGpp synthetase [Lactobacillus helveticus DPC 4571]
 gi|160348411|gb|ABX27085.1| ppGpp synthetase [Lactobacillus helveticus DPC 4571]
          Length = 746

 Score =  337 bits (863), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 196/485 (40%), Positives = 283/485 (58%), Gaps = 49/485 (10%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++ +++  V +A   A +AH GQKR SG+P+IIHP +VA  L  L LD ++I AG LHD
Sbjct: 19  YMNDDQVAFVEKAYEFANKAHAGQKRASGQPYIIHPTQVAGTLATLGLDPDTIVAGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
           TVEDT  VT + ++E+FG  V  IV+G TK++K        E  S Q+  A++ R+M +A
Sbjct: 79  TVEDT-PVTNDELKEKFGEGVAFIVDGVTKLNKY-------EYKSHQEFLAENHRKMLIA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M +++RVI+VKLADRLHNM TL H+ P KQ  IA+ET+ ++APLA  LG+  IK ELE++
Sbjct: 131 MAKDLRVIMVKLADRLHNMHTLQHLRPDKQRWIASETMDIYAPLADRLGIGTIKWELEDM 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           SF Y N E Y ++   +     + EK + +  K L K       LD + +K EI    K 
Sbjct: 191 SFHYLNPEAYYRIVNLMDVKRSQREKYIADTIKTLKKT------LDELGIKYEIYGRPKH 244

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIYK ++      +E+  +  +R+I+K              + CY VLG VH  W P+
Sbjct: 245 IYSIYKKMVNKHKDFDEIYDLLAVRVIVK------------NVRDCYAVLGAVHTEWKPM 292

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK NGYQSLHTT+I         LE+QIRTE+M  +AE G+AAH++ +  
Sbjct: 293 PGRFKDYIAMPKVNGYQSLHTTIIG---PGGRPLEIQIRTEQMHEVAEYGVAAHWAYK-- 347

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
                          RG    +  ++   ++  +  I E ++E      + EF+ ++  D
Sbjct: 348 ---------------RGNFTGVQESSSGEKLDMVREILELKDE---TKDAGEFMKSVKSD 389

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           +   RV+VFTP+GE+  LPKG+  +D+AY IHT++GN  V AKVN  LV   + L N +V
Sbjct: 390 IFSDRVYVFTPKGEVYELPKGSVTLDFAYAIHTQVGNHAVGAKVNNKLVPLDYKLRNGDV 449

Query: 620 VEIIT 624
           +EI+T
Sbjct: 450 IEIMT 454


>gi|402837012|ref|ZP_10885543.1| putative GTP diphosphokinase [Mogibacterium sp. CM50]
 gi|402270028|gb|EJU19297.1| putative GTP diphosphokinase [Mogibacterium sp. CM50]
          Length = 732

 Score =  337 bits (863), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 198/505 (39%), Positives = 298/505 (59%), Gaps = 61/505 (12%)

Query: 126 SPERLWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
           +P    E+    +  ++P  +L LV +A  +A   H GQ R+SGEP+IIHP+ V+ IL  
Sbjct: 5   APVMTTEEFIAQLKSINPKYDLPLVVKAFEIANRLHSGQLRKSGEPYIIHPIAVSFILAT 64

Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
             +D E+I AGL+HD VEDT   T E++ E+FG  +  +V+G   V+KLG +K      S
Sbjct: 65  FGMDTETIIAGLMHDVVEDTPY-TREQLVEDFGEEIALLVDG---VTKLGNIKYD----S 116

Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
            ++++A++ R+MFLAM++++RV+I+KLADRLHNMRTL +MP  K+   A ETL+++APLA
Sbjct: 117 KEELQAENFRKMFLAMSKDIRVLIIKLADRLHNMRTLEYMPTTKREEKALETLEIYAPLA 176

Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
             LG+Y IK ELE+L+ MY +  +Y ++  +V    +  E  +++    L+ +I+    L
Sbjct: 177 GRLGIYSIKFELEDLALMYLHPTEYRELSNKVNKRRQSREAVVQQ----LITEIK--AGL 230

Query: 365 DLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
           D   ++ E+    K  YSIYK ++  +  ++E+  +  +R+I+               + 
Sbjct: 231 DKANIEYEVTGRSKHLYSIYKKMVIQKKQLDEIFDLTAIRVIV------------DNIKD 278

Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRT 479
           CY  LGLVH  WTPIP   KDYIA PKPN YQS+HTT++     PF        E+QIRT
Sbjct: 279 CYATLGLVHTRWTPIPGRFKDYIAMPKPNMYQSIHTTVLDDEGNPF--------EIQIRT 330

Query: 480 EEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREW 539
           +EM  IAE GIAAH+                 +   GK+    N +   +++WL    EW
Sbjct: 331 KEMHRIAEYGIAAHW-----------------KYKEGKSDSKQNED-EKKLAWLRQALEW 372

Query: 540 QEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMV 599
           Q+E      S EF++T+  DL   +VFVFTP G++  LP  +T +D+A+ IHT++G + V
Sbjct: 373 QKE---TDDSLEFLETLKVDLFDHQVFVFTPHGDVVELPASSTPIDFAFKIHTDVGVRCV 429

Query: 600 AAKVNGNLVSPTHVLANAEVVEIIT 624
            AKVNG +V+  H L   ++VEIIT
Sbjct: 430 GAKVNGKMVTIDHKLMTGDIVEIIT 454


>gi|317498122|ref|ZP_07956424.1| RelA/SpoT family protein [Lachnospiraceae bacterium 5_1_63FAA]
 gi|316894599|gb|EFV16779.1| RelA/SpoT family protein [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 765

 Score =  337 bits (863), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 206/515 (40%), Positives = 296/515 (57%), Gaps = 64/515 (12%)

Query: 118 SSDAFKEDSPERLWEDLRPTI-SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPV 176
           S D+F    PE L   L  T+ S     ++E V RA  +A++AH+ QKR+SGEP+IIHP+
Sbjct: 18  SPDSFT--PPEELKRQLITTMQSIYDEEDIEAVERAYKVAYKAHEKQKRKSGEPYIIHPI 75

Query: 177 EVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKL 236
            VA IL ELELD E+I AGLLHD VEDT   T E I  +FG  V ++V+G TK+ +L   
Sbjct: 76  CVAIILAELELDKETIMAGLLHDVVEDTET-THEDIVRDFGEEVAQLVDGVTKLGQLSYS 134

Query: 237 KCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATET 296
           K K E      V+A++LR+MFLAM +++RVI++KLADRLHNMRT+  M P KQ   + ET
Sbjct: 135 KDKIE------VQAENLRKMFLAMAKDIRVILIKLADRLHNMRTMQFMRPEKQKEKSRET 188

Query: 297 LQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMK 356
           + ++AP+A  LG+ +IK EL++L+  Y   + Y  ++  +    +E E  ++E    ++ 
Sbjct: 189 MDIYAPIAHRLGISKIKVELDDLALRYLKPDVYEDLEHSLDSAKEEREAFIQE----IVD 244

Query: 357 KIEDDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVG 416
           +++    +D   +K EI    K  +SIYK ++    +I+++  +  +RI +         
Sbjct: 245 EVKG--HIDHAGIKAEIDGRVKHMFSIYKKMVNQHKTIDQIYDLFAVRIKV--------- 293

Query: 417 PLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMF 471
                 + CY  LG++H ++ PIP   KDYIA PKPN YQSLHTTLI     PF      
Sbjct: 294 ---DTVKDCYAALGIIHEMYKPIPGRFKDYIAMPKPNMYQSLHTTLIGPEGHPF------ 344

Query: 472 RLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRIS 531
             E+QIRT EM  +AE GIAAH+  +                    T  LN      ++S
Sbjct: 345 --EIQIRTFEMHRVAEYGIAAHWKYK----------------ENNNTKGLNKEE--EKLS 384

Query: 532 WLNAIREWQEEFVGNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYM 589
           WL  + EWQ +   N   +EF+  +    DL   +V+ FTP G++KNL  G+T +D+AY 
Sbjct: 385 WLREVLEWQRDMDDN---KEFLSLLKTNLDLFAEQVYCFTPNGDVKNLANGSTPIDFAYS 441

Query: 590 IHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
           IH+ +GNKMV A+VNG  V   + L N + VEIIT
Sbjct: 442 IHSAVGNKMVGARVNGRQVPFDYHLQNGDRVEIIT 476


>gi|51893575|ref|YP_076266.1| GTP pyrophosphokinase [Symbiobacterium thermophilum IAM 14863]
 gi|51857264|dbj|BAD41422.1| GTP pyrophosphokinase [Symbiobacterium thermophilum IAM 14863]
          Length = 735

 Score =  337 bits (863), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 198/505 (39%), Positives = 290/505 (57%), Gaps = 67/505 (13%)

Query: 133 DLRPTI----SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
           D++P +    SY    ++ L+  A   A +AH+GQ RRSGEP+I HP+ VA I+  LELD
Sbjct: 6   DIQPLLDKVRSYNPTADVALIDNAFAFAKQAHEGQCRRSGEPYITHPIAVAEIVASLELD 65

Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
            ESIAA LLHD +ED  V  +E +EE FG  V  +V+G   VSKL +L+  + + +    
Sbjct: 66  EESIAAALLHDVLEDCGV-KYEELEERFGKEVATLVDG---VSKLDRLQFTSRDEA---- 117

Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
           + ++LR+MFLAM +++RVI++KLADRLHNMRTL H P   Q  IA ET+ ++APLA  LG
Sbjct: 118 QVENLRKMFLAMAKDLRVILIKLADRLHNMRTLKHQPSDAQVRIAQETMDIYAPLAHRLG 177

Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
           + +IK ELE+L+F     + Y    + +A L     +E     + LM ++   + L+   
Sbjct: 178 LSEIKWELEDLAFRILEPDRY----QEMAYLVARKRQERMAITQDLMDQLR--EVLEKEG 231

Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
           ++ EI    K  YSIYK + +    I+++  +  +RII++              + CY V
Sbjct: 232 IQAEISGRPKHFYSIYKKMYRQGKDISQIYDLIAIRIIVE------------EVKDCYAV 279

Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMD 483
           LG++H  W P+P   KDYIATPKPN YQSLHTT+I     PF        E+QIRT EM 
Sbjct: 280 LGIIHSHWKPLPLRFKDYIATPKPNMYQSLHTTVIGPHGEPF--------EIQIRTREMH 331

Query: 484 LIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEF 543
             AE G+AAH+S +                  GKT    +     ++ WL ++ EW +E 
Sbjct: 332 RTAEFGVAAHWSYK-----------------EGKT----DKEFDRKLQWLRSLLEWHQEI 370

Query: 544 VGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKV 603
                +REFV+++  D+   +VFVF+P+G + +LP G T +D+A+ +H++IG + V AKV
Sbjct: 371 ---RDAREFVESVKVDIFSDQVFVFSPKGHVFSLPAGGTPLDFAFAVHSDIGYRCVGAKV 427

Query: 604 NGNLVSPTHVLANAEVVEIITYNVS 628
           NG +      L N +VVEI+T   S
Sbjct: 428 NGKIAPLDTALKNGDVVEILTSKQS 452


>gi|331090638|ref|ZP_08339489.1| hypothetical protein HMPREF9477_00132 [Lachnospiraceae bacterium
           2_1_46FAA]
 gi|330401078|gb|EGG80673.1| hypothetical protein HMPREF9477_00132 [Lachnospiraceae bacterium
           2_1_46FAA]
          Length = 766

 Score =  337 bits (863), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 202/516 (39%), Positives = 298/516 (57%), Gaps = 83/516 (16%)

Query: 128 ERLWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELE 186
           ++L++ L   I    P+ ++ L+ +A  +A EAH+GQ R+SGE +IIHP  V  IL +LE
Sbjct: 32  DQLYDALIARIRKYHPSTDISLIEKAYRIAKEAHEGQVRKSGEAYIIHPTWVGLILADLE 91

Query: 187 LDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQ 246
           LD E+IAAG+LHD VEDT V+T E I EEFG+ V  +V+G   V+KLG+L    +   VQ
Sbjct: 92  LDKETIAAGILHDVVEDT-VMTEEEITEEFGSEVALLVDG---VTKLGQLSYSADKLEVQ 147

Query: 247 DVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKL 306
              A++LR+MFLAM +++RVI++KLADRLHNMRTL  M P KQ   A ET+ ++AP+A+ 
Sbjct: 148 ---AENLRKMFLAMAKDIRVILIKLADRLHNMRTLQFMRPEKQKEKARETMDIYAPIAQR 204

Query: 307 LGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDL 366
           LG+ +IK+EL++L+  Y+  + +  +                  N+I  +K E ++F+  
Sbjct: 205 LGISKIKTELDDLALKYSQPDVFYDL-----------------VNQINARKTEREEFVQQ 247

Query: 367 M-----------TVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGV 415
           +            +K E+    K  +SIYK ++    +++++  +  +RII+        
Sbjct: 248 IVEEVSTHMKNANIKAEVYGRVKHFFSIYKKMVNQDKTVDQIYDLFAIRIIV-------- 299

Query: 416 GPLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESM 470
                  + CY  LG +H ++TPIP   KDYIA PKPN YQSLHTTL+     PF     
Sbjct: 300 ----DSVKDCYAALGAIHEMYTPIPGRFKDYIAMPKPNMYQSLHTTLMGPAGQPF----- 350

Query: 471 FRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRI 530
              E+QIRT EM   AE GIAAH+             + +G S   K+V         ++
Sbjct: 351 ---EIQIRTVEMHKTAEYGIAAHWK-----------YKESGGSE--KSVATRAEE---KL 391

Query: 531 SWLNAIREWQEEFVGNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAY 588
           SWL  I EWQ+    +  +REF+  +    DL    V+ FTP G++KNLP G+T VD+AY
Sbjct: 392 SWLRQILEWQQ----DTDNREFLSLLKGDLDLFAEDVYCFTPNGDVKNLPNGSTPVDFAY 447

Query: 589 MIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
            IH+ +GNKMV A+VNG LV   + + N + +E++T
Sbjct: 448 AIHSAVGNKMVGARVNGKLVPIDYKIQNGDRIEVLT 483


>gi|400291027|ref|ZP_10793054.1| putative stringent response protein, ppGpp synthetase
           [Streptococcus ratti FA-1 = DSM 20564]
 gi|399921818|gb|EJN94635.1| putative stringent response protein, ppGpp synthetase
           [Streptococcus ratti FA-1 = DSM 20564]
          Length = 740

 Score =  337 bits (863), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 188/492 (38%), Positives = 291/492 (59%), Gaps = 49/492 (9%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           +Y++  ++ LV++AL  A E H+GQ R+SGEP+IIHP++VA IL +L LD  +++ G LH
Sbjct: 18  AYMNEADVALVQKALDYAVECHNGQFRKSGEPYIIHPIQVAGILADLHLDAITVSCGFLH 77

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D +EDT   T + +E +FG+ V+ IV+G   V+KLGK++ K+    +    A++ R+M +
Sbjct: 78  DVIEDTEA-TLDNLENKFGSDVKNIVDG---VTKLGKVEYKSHEEQL----AENHRKMLM 129

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM++++RVI+VKLADRLHNMRTL H+   KQ  I+ ET++++APLA  LG+ +IK ELE+
Sbjct: 130 AMSKDIRVILVKLADRLHNMRTLRHLRKDKQERISRETMEIYAPLAHRLGISRIKWELED 189

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
           L+F Y N  ++ K    ++ L  E  +E E     ++ KI+  ++ +   +  +I    K
Sbjct: 190 LAFRYLNEVEFYK----ISHLMNEKRREREALVNDIVDKIK--EYTEEQGLHGDIYGRPK 243

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIY+ +   +   +++  +  +R I+              Q   Y +LG +H +W P
Sbjct: 244 HIYSIYRKMRDKKKRFDQIYDLIAIRCIL------------DTQSDVYAMLGYIHELWRP 291

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PK NGYQS+HTT    +Y     +EVQIRT EM  +AE G+AAH++ + 
Sbjct: 292 MPGRFKDYIANPKANGYQSIHTT----VYGPKGPIEVQIRTHEMHAVAEYGVAAHWAYKK 347

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
            + G V                 +N    L ++W+  + E Q    GN    +FVD++  
Sbjct: 348 GIKGKV-----------------SNQESTLGMNWIKELVELQAASNGNAV--DFVDSVKE 388

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           D+   R++VFTP G ++ LPK +  +D+AY IHT++G K   AKVNG +V  T  L   +
Sbjct: 389 DIFAERIYVFTPNGAVQELPKDSGPIDFAYAIHTQVGEKATGAKVNGRMVPLTAKLKTGD 448

Query: 619 VVEIITYNVSFS 630
           VVEIIT + SF 
Sbjct: 449 VVEIITNSNSFG 460


>gi|168187498|ref|ZP_02622133.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase [Clostridium
           botulinum C str. Eklund]
 gi|169294579|gb|EDS76712.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase [Clostridium
           botulinum C str. Eklund]
          Length = 729

 Score =  337 bits (863), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 199/501 (39%), Positives = 292/501 (58%), Gaps = 62/501 (12%)

Query: 130 LWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
           + EDL   I     N + +++ +A   A  AH  QKR SGEP+IIHPVEVA IL E+ LD
Sbjct: 1   MLEDLLQKIDENCNNVDKDIIIKAYNYAKNAHKKQKRISGEPYIIHPVEVACILAEMGLD 60

Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
             +IAA LLHD +EDT+  T+E +E +F + V  +VEG   V+KLGK+K K +    ++ 
Sbjct: 61  ENTIAASLLHDVIEDTDY-TYEDVERDFNSEVANLVEG---VTKLGKIKFKTK----EEQ 112

Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
           +++++R+M LAMT+++RVI++KLADRLHNMRTL +M   KQ   A ETL ++APLA  LG
Sbjct: 113 QSENVRKMLLAMTKDIRVILIKLADRLHNMRTLKYMTVEKQKEKAKETLDIYAPLAHRLG 172

Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
           + ++K ELE+L+  Y N  +Y  + R+VA+  KE E+ +E     L +K      LD   
Sbjct: 173 ISKVKWELEDLALRYLNPNEYYDLVRKVAEKRKEREEYIERIIHELKEK------LDEAG 226

Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
           +K+EI    K  YSIY+ ++    +I+++  +  +RI            L    + CY V
Sbjct: 227 IKSEIEGRPKHFYSIYRKMVIKNKTIDQIFDLTAVRI------------LVEDVKDCYAV 274

Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMD 483
           LG+VH ++ PIP   KDYIA PKPN YQSLH+T+I     PF        E+QIRT EM 
Sbjct: 275 LGMVHTMYKPIPGRFKDYIAMPKPNMYQSLHSTVIGPQGKPF--------EIQIRTYEMH 326

Query: 484 LIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEF 543
             +E GIAAH+  +            N           ++ +   +++WL  + EWQ E 
Sbjct: 327 YTSEYGIAAHWKYK--------EGEKN-----------SDKDFEAKLAWLREVLEWQRE- 366

Query: 544 VGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKV 603
                  EF++    D+    VFVFTP+G++ NLP  +T +D+AY IHT+IG++ +  KV
Sbjct: 367 --TSNPEEFMEDFKIDMFSDEVFVFTPKGDVINLPSDSTPIDFAYRIHTDIGHRCIGGKV 424

Query: 604 NGNLVSPTHVLANAEVVEIIT 624
           NG +V   + L   E+VE++T
Sbjct: 425 NGRIVPLDYHLKTGEIVEVLT 445


>gi|408409949|ref|ZP_11181214.1| GTP pyrophosphokinase [Lactobacillus sp. 66c]
 gi|407875894|emb|CCK83020.1| GTP pyrophosphokinase [Lactobacillus sp. 66c]
          Length = 753

 Score =  337 bits (863), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 199/485 (41%), Positives = 280/485 (57%), Gaps = 50/485 (10%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++P++L  V  A   A  AH+GQ R SG+P+I+HP +VA  L  L LD +++AAG LHD
Sbjct: 19  YMTPDQLAFVESAYQFAARAHEGQTRASGQPYIVHPTQVAGTLANLGLDPDTVAAGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
           TVEDT+V T + I+E+FGA V  IV+G TK++K        E  S ++  A++ R+M +A
Sbjct: 79  TVEDTSV-TNDDIKEKFGADVAFIVDGVTKLNKY-------EYKSHKEFLAENHRKMLIA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M +++RVI+VKLADRLHNM TL H+ P KQ  IA ETL ++APLA  LG+  IK ELE++
Sbjct: 131 MAKDLRVILVKLADRLHNMHTLEHLRPDKQRRIAAETLDIYAPLADRLGIGTIKWELEDM 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           SF Y N ++Y K+   +     E E  +++A   L         LD + +  +I    K 
Sbjct: 191 SFHYINPDEYYKIVSMMDAKRSEREGYIKDAIDYLKGT------LDSLGIDYDISGRPKH 244

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIYK ++      NE+  +  +R+I+         P       CY VLG VH  W P+
Sbjct: 245 IYSIYKKMVNKHKDFNEIYDLLAVRVIV---------PTVKD---CYAVLGAVHTKWKPM 292

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK NGYQSLHTT+I         LE+QIRT+EM  +AE G+AAH++    
Sbjct: 293 PGRFKDYIAMPKANGYQSLHTTIIG---PGGKPLEIQIRTKEMHEVAEYGVAAHWA---- 345

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
                 + R N      K         AL IS    I E Q+E   +  + EF+  +  D
Sbjct: 346 ------YKRGNFDGVEAKEGG------ALDIS--REILELQKE---SSNADEFMQAVHSD 388

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
               +V+VFTP+GE+  LPKG+  +D+AY IHT++G+  + AKVN  LV   + L N +V
Sbjct: 389 FFSDKVYVFTPKGEVYELPKGSVTLDFAYAIHTQVGDHAIGAKVNDKLVPLDYKLKNGDV 448

Query: 620 VEIIT 624
           V+I+T
Sbjct: 449 VDILT 453


>gi|223044113|ref|ZP_03614152.1| RelA/SpoT family protein [Staphylococcus capitis SK14]
 gi|417907908|ref|ZP_12551675.1| GTP diphosphokinase [Staphylococcus capitis VCU116]
 gi|222442507|gb|EEE48613.1| RelA/SpoT family protein [Staphylococcus capitis SK14]
 gi|341594995|gb|EGS37673.1| GTP diphosphokinase [Staphylococcus capitis VCU116]
          Length = 729

 Score =  336 bits (862), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 196/498 (39%), Positives = 293/498 (58%), Gaps = 49/498 (9%)

Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
           E L    SYLS +E E V ++  +A+EAH GQ R++G P+I+HP++VA IL E+ LD  +
Sbjct: 11  EVLHKAKSYLSASEYEYVLKSYHIAYEAHQGQFRKNGLPYIMHPIQVAGILTEMRLDGPT 70

Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
           I AG LHD +EDT   TFE +++ F   V RIV+G TK+ K+ K + K E       +A+
Sbjct: 71  IVAGFLHDVIEDTPY-TFEDVKDMFNEEVARIVDGVTKLKKV-KYRSKEEQ------QAE 122

Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
           + R++F+A+ ++VRVI+VKLADRLHNMRTL  MP  KQ  I+ ETL+++APLA  LG+  
Sbjct: 123 NHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQVRISKETLEIYAPLAHRLGINT 182

Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
           IK ELE+ +  Y ++  Y     R+ +L K+   E E      + KIE +  ++ M +  
Sbjct: 183 IKWELEDTALRYIDSVQYF----RIVNLMKKKRSEREAYIDNAINKIEAE--MEKMNLSG 236

Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
           EI    K  YSIY+ ++K +   +++  +  +RII+            +    CY +LGL
Sbjct: 237 EINGRPKHIYSIYRKMMKQKKQFDQIFDLLAIRIIV------------NSINDCYAILGL 284

Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
           VH +W P+P   KDYIA PK N YQSLHTT++     +   LE+QIRT EM  IAE G+A
Sbjct: 285 VHTLWKPMPGRFKDYIAMPKQNMYQSLHTTVVG---PNGDPLEIQIRTYEMHEIAEHGVA 341

Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
           AH++ +                  GKTV     +   +++WL   +E  E    +  ++E
Sbjct: 342 AHWAYK-----------------EGKTVNEKTQDFQNKLNWL---KELAETDHTSTDAQE 381

Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
           F++++  DL   +V+ FTP  ++  LP GA  +D+AY IH+E+GNKM+ AKVNG +V   
Sbjct: 382 FMESLKYDLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPID 441

Query: 612 HVLANAEVVEIITYNVSF 629
           +VL   +++EI T   S+
Sbjct: 442 YVLQTGDIIEIRTSKHSY 459


>gi|387786972|ref|YP_006252068.1| putative stringent response protein, ppGpp synthetase
           [Streptococcus mutans LJ23]
 gi|449883389|ref|ZP_21785143.1| putative stringent response protein [Streptococcus mutans SA38]
 gi|449903411|ref|ZP_21792089.1| putative stringent response protein [Streptococcus mutans M230]
 gi|449914277|ref|ZP_21795517.1| putative stringent response protein [Streptococcus mutans 15JP3]
 gi|449936039|ref|ZP_21803764.1| putative stringent response protein [Streptococcus mutans 2ST1]
 gi|449946835|ref|ZP_21807078.1| putative stringent response protein [Streptococcus mutans 11SSST2]
 gi|449975617|ref|ZP_21815887.1| putative stringent response protein [Streptococcus mutans 11VS1]
 gi|449980266|ref|ZP_21817099.1| putative stringent response protein [Streptococcus mutans 5SM3]
 gi|449989092|ref|ZP_21820903.1| putative stringent response protein [Streptococcus mutans NVAB]
 gi|449994816|ref|ZP_21822743.1| putative stringent response protein [Streptococcus mutans A9]
 gi|450002113|ref|ZP_21825898.1| putative stringent response protein [Streptococcus mutans N29]
 gi|450051995|ref|ZP_21841111.1| putative stringent response protein [Streptococcus mutans NFSM1]
 gi|450062469|ref|ZP_21844354.1| putative stringent response protein [Streptococcus mutans NLML5]
 gi|450125108|ref|ZP_21867460.1| putative stringent response protein [Streptococcus mutans U2A]
 gi|450155233|ref|ZP_21878154.1| putative stringent response protein [Streptococcus mutans 21]
 gi|379133373|dbj|BAL70125.1| putative stringent response protein, ppGpp synthetase
           [Streptococcus mutans LJ23]
 gi|449158270|gb|EMB61690.1| putative stringent response protein [Streptococcus mutans 15JP3]
 gi|449165895|gb|EMB68861.1| putative stringent response protein [Streptococcus mutans 2ST1]
 gi|449169385|gb|EMB72162.1| putative stringent response protein [Streptococcus mutans 11SSST2]
 gi|449176663|gb|EMB78997.1| putative stringent response protein [Streptococcus mutans 11VS1]
 gi|449177181|gb|EMB79494.1| putative stringent response protein [Streptococcus mutans 5SM3]
 gi|449182941|gb|EMB84942.1| putative stringent response protein [Streptococcus mutans NVAB]
 gi|449183650|gb|EMB85627.1| putative stringent response protein [Streptococcus mutans N29]
 gi|449184976|gb|EMB86885.1| putative stringent response protein [Streptococcus mutans A9]
 gi|449201351|gb|EMC02351.1| putative stringent response protein [Streptococcus mutans NFSM1]
 gi|449205809|gb|EMC06539.1| putative stringent response protein [Streptococcus mutans NLML5]
 gi|449232901|gb|EMC31992.1| putative stringent response protein [Streptococcus mutans U2A]
 gi|449237340|gb|EMC36197.1| putative stringent response protein [Streptococcus mutans 21]
 gi|449249838|gb|EMC47932.1| putative stringent response protein [Streptococcus mutans SA38]
 gi|449261105|gb|EMC58591.1| putative stringent response protein [Streptococcus mutans M230]
          Length = 740

 Score =  336 bits (862), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 189/491 (38%), Positives = 289/491 (58%), Gaps = 49/491 (9%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++  ++  V++AL  A E H GQ R+SGEP+IIHP++VA IL +L LD  +++ G LHD
Sbjct: 19  YMNKADIAFVQKALDYATECHSGQFRKSGEPYIIHPIQVAGILADLHLDAITVSCGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            +EDT   T + +E +FG+ V+ IV+G   V+KLGK++ K+    +    A++ R+M +A
Sbjct: 79  VIEDTEA-TLDHLEAKFGSDVKNIVDG---VTKLGKVEYKSHEEQL----AENHRKMLMA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M++++RVI+VKLADRLHNMRTL H+   KQ  I+ ET++++APLA  LG+ +IK ELE+L
Sbjct: 131 MSKDIRVILVKLADRLHNMRTLRHLRKDKQERISRETMEIYAPLAHRLGISRIKWELEDL 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           +F Y N  ++ K    ++ L  E  +E E     ++ KI+   + +   +  EI    K 
Sbjct: 191 AFRYLNEVEFYK----ISHLMNEKRREREALVDDIVDKIK--AYTEEQGLHGEIYGRPKH 244

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIY+ +   +   +++  +  +R I+              Q   Y +LG +H +W P+
Sbjct: 245 IYSIYRKMRDKKKRFDQIYDLIAIRCIL------------DTQSDVYAMLGYIHELWRPM 292

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK NGYQS+HTT    +Y     +EVQIRT EM  +AE G+AAH++ +  
Sbjct: 293 PGRFKDYIANPKANGYQSIHTT----VYGPKGPIEVQIRTHEMHQVAEYGVAAHWAYKKG 348

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
           + G V                 N+   AL ++W+  + E Q+   GN    +FVD++  D
Sbjct: 349 IKGKV-----------------NSQESALGMNWIKELVELQDASNGNAV--DFVDSVKED 389

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           +   R++VFTP G ++ LPK +  +D+AY IHT++G K   AKVNG +V  T  L   +V
Sbjct: 390 IFAERIYVFTPNGAVQELPKDSGPIDFAYAIHTQVGEKATGAKVNGRMVPLTAKLKTGDV 449

Query: 620 VEIITYNVSFS 630
           VEIIT + SF 
Sbjct: 450 VEIITNSNSFG 460


>gi|375088782|ref|ZP_09735120.1| RelA/SpoT family protein [Dolosigranulum pigrum ATCC 51524]
 gi|374561747|gb|EHR33086.1| RelA/SpoT family protein [Dolosigranulum pigrum ATCC 51524]
          Length = 490

 Score =  336 bits (862), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 193/492 (39%), Positives = 289/492 (58%), Gaps = 49/492 (9%)

Query: 138 ISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLL 197
           ++Y+S   +  V+RA  LA +AH GQ R+SGE FI HPV+VA IL EL +D  ++A G L
Sbjct: 17  LTYMSSEHVTFVKRAYDLAEKAHAGQMRKSGEQFISHPVQVAAILAELRMDPVTVATGFL 76

Query: 198 HDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMF 257
           HD VEDT   T+  I E F   V  +V+G   V+KLGK K K    S ++ +A++ R+M 
Sbjct: 77  HDVVEDTEY-TYADIAELFNPEVADLVDG---VTKLGKFKFK----SKKEHQAENHRKML 128

Query: 258 LAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELE 317
           +AM ++VRV++VKLADRLHNMRTLS+    KQ  IATET++++APLA  LG+ +IK ELE
Sbjct: 129 IAMAQDVRVVLVKLADRLHNMRTLSYHRKEKQVDIATETMEIYAPLADRLGISRIKWELE 188

Query: 318 NLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVC 377
           ++S  YTN++ Y ++   +    ++ E+ +E A   + + +      D + ++ +I    
Sbjct: 189 DISLRYTNSQQYYRIVHMMNSRREDRERYIENAKATIQEAV------DELDIEADITGRP 242

Query: 378 KEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWT 437
           K  +SIYK +   +   +E+  +  LR+I+         P       CY VLG +H  W 
Sbjct: 243 KHIFSIYKKMRNQKKQFSEIYDLLALRVIV---------PSIKD---CYGVLGAIHTKWK 290

Query: 438 PIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGR 497
           P+P   KDYIA PK N YQSLHTT+   L      LEVQIRT +M  IAE G+AAH++ +
Sbjct: 291 PMPGRFKDYIAMPKANMYQSLHTTV---LGPDATPLEVQIRTFKMHEIAEYGVAAHWAYK 347

Query: 498 VFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTIT 557
                             G T       +   ISW   I E Q E   + T+ +F+D+I 
Sbjct: 348 -----------------EGITTKAPTDEMDQHISWFRDIIELQTE---SNTASDFMDSIK 387

Query: 558 RDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANA 617
           +D+   +V+VF+P+G++  LP+ ++ +D+AY +HTE+GN+   AKVNG +V   + L N 
Sbjct: 388 QDIFKDKVYVFSPKGDVMELPRDSSTLDFAYHVHTEVGNQSTGAKVNGKIVPLNYKLKNG 447

Query: 618 EVVEIITYNVSF 629
           ++VE++T + SF
Sbjct: 448 DIVEMLTSSSSF 459


>gi|418326147|ref|ZP_12937339.1| GTP diphosphokinase [Staphylococcus epidermidis VCU071]
 gi|365226304|gb|EHM67523.1| GTP diphosphokinase [Staphylococcus epidermidis VCU071]
          Length = 729

 Score =  336 bits (862), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 193/491 (39%), Positives = 291/491 (59%), Gaps = 49/491 (9%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           SYLS +E E V ++  +A+EAH GQ R++G P+I+HP++VA IL E+ LD  +I AG LH
Sbjct: 18  SYLSKSEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPTIVAGFLH 77

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D +EDT+  TFE +++ F   + RIV+G TK+ K+ K + K E       +A++ R++F+
Sbjct: 78  DVIEDTSY-TFEDVKDMFNEEIARIVDGVTKLKKV-KYRSKEEQ------QAENHRKLFI 129

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           A+ ++VRVI+VKLADRLHNMRTL  MP  KQ  I+ ETL+++APLA  LG+  IK ELE+
Sbjct: 130 AIAKDVRVILVKLADRLHNMRTLKAMPREKQVRISKETLEIYAPLAHRLGINTIKWELED 189

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
            +  Y ++  Y     R+ +L K+   E E      + KIE++  +  M +  EI    K
Sbjct: 190 TALRYIDSVQYF----RIVNLMKKKRSEREAYITNAINKIENE--MTNMNLSGEINGRPK 243

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIY+ ++K +   +++  +  +RII+            +    CY  LGLVH +W P
Sbjct: 244 HIYSIYRKMIKQKKQFDQIFDLLAIRIIV------------NSINDCYATLGLVHTLWKP 291

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PK N YQSLHTT++     +   LE+QIRT EM  IAE G+AAH++ + 
Sbjct: 292 MPGRFKDYIAMPKQNMYQSLHTTVVG---PNGDPLEIQIRTHEMHEIAEHGVAAHWAYK- 347

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                            GKTV     +   +++WL   +E  E    +  ++EF++++  
Sbjct: 348 ----------------EGKTVNQKTQDFQNKLNWL---KELAETDHTSADAQEFMESLKY 388

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           DL   +V+ FTP  ++  LP GA  +D+AY IH+E+GNKM+ AKVNG +V   +VL   +
Sbjct: 389 DLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPIDYVLQTGD 448

Query: 619 VVEIITYNVSF 629
           ++EI T   S+
Sbjct: 449 IIEIRTSKHSY 459


>gi|449965934|ref|ZP_21812121.1| putative stringent response protein [Streptococcus mutans 15VF2]
 gi|449170755|gb|EMB73450.1| putative stringent response protein [Streptococcus mutans 15VF2]
          Length = 740

 Score =  336 bits (862), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 189/491 (38%), Positives = 289/491 (58%), Gaps = 49/491 (9%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++  ++  V++AL  A E H GQ R+SGEP+IIHP++VA IL +L LD  +++ G LHD
Sbjct: 19  YMNKADIAFVQKALDYATECHSGQFRKSGEPYIIHPIQVAGILADLHLDAITVSCGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            +EDT   T + +E +FG+ V+ IV+G   V+KLGK++ K+    +    A++ R+M +A
Sbjct: 79  VIEDTEA-TLDHLEAKFGSDVKNIVDG---VTKLGKVEYKSHEEQL----AENHRKMLMA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M++++RVI+VKLADRLHNMRTL H+   KQ  I+ ET++++APLA  LG+ +IK ELE+L
Sbjct: 131 MSKDIRVILVKLADRLHNMRTLRHLRKDKQERISRETMEIYAPLAHRLGISRIKWELEDL 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           +F Y N  ++ K    ++ L  E  +E E     ++ KI+   + +   +  EI    K 
Sbjct: 191 AFRYLNEVEFYK----ISHLMNEKRREREALVDDIVDKIK--AYTEEQGLHGEIYGRPKH 244

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIY+ +   +   +++  +  +R I+              Q   Y +LG +H +W P+
Sbjct: 245 IYSIYRKMRDKKKRFDQIYDLIAIRCIL------------DTQSDVYAMLGYIHELWRPM 292

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK NGYQS+HTT    +Y     +EVQIRT EM  +AE G+AAH++ +  
Sbjct: 293 PGRFKDYIANPKANGYQSIHTT----VYGPKGPIEVQIRTHEMHQVAEYGVAAHWAYKKG 348

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
           + G V                 N+   AL ++W+  + E Q+   GN    +FVD++  D
Sbjct: 349 IKGKV-----------------NSQESALGMNWIKELVELQDASNGNAV--DFVDSVKED 389

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           +   R++VFTP G ++ LPK +  +D+AY IHT++G K   AKVNG +V  T  L   +V
Sbjct: 390 IFAERIYVFTPNGAVQELPKDSGPIDFAYAIHTQVGEKATGAKVNGRMVPLTAKLKTGDV 449

Query: 620 VEIITYNVSFS 630
           VEIIT + SF 
Sbjct: 450 VEIITNSNSFG 460


>gi|302391503|ref|YP_003827323.1| (p)ppGpp synthetase I SpoT/RelA [Acetohalobium arabaticum DSM 5501]
 gi|302203580|gb|ADL12258.1| (p)ppGpp synthetase I, SpoT/RelA [Acetohalobium arabaticum DSM
           5501]
          Length = 734

 Score =  336 bits (862), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 205/494 (41%), Positives = 292/494 (59%), Gaps = 53/494 (10%)

Query: 132 EDLRPTI-SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWE 190
           EDL   I SY++  +LEL+ +A   A +AH+GQ R SGEPF+ HP+ VA I+ ELELD  
Sbjct: 17  EDLIEKIESYINDPDLELITKAYKFAKDAHEGQYRVSGEPFVEHPLGVALIMAELELDII 76

Query: 191 SIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKA 250
           SI   LLHD VEDT V +F ++  EFG  +  +V G TK+SK+   K + E       +A
Sbjct: 77  SITGALLHDVVEDTEV-SFAQLRNEFGEEITLLVNGVTKLSKIA-FKSREEQ------QA 128

Query: 251 DDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMY 310
           + LR+MFLAM++++RVI++KL+DRLHNMRTL ++   KQ  IA ET++++APLA  LG+ 
Sbjct: 129 ESLRKMFLAMSKDIRVILIKLSDRLHNMRTLEYLSQQKQERIARETIEIYAPLAHRLGIS 188

Query: 311 QIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVK 370
            +K ELE+LSF +     Y ++  +V+    E E+ ++      + K+E  + L+L  + 
Sbjct: 189 TLKWELEDLSFKHLEPNKYYELSNKVSKNRDEREEYIDRC----ISKVE--KRLNLEGID 242

Query: 371 TEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLG 430
             I    K  YSIY+ + +    ++E+  +  LR+I+            +  Q CY VLG
Sbjct: 243 AHIYGRPKHLYSIYQKMKRKNKELSEIYDLVALRVIV------------NDVQECYQVLG 290

Query: 431 LVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGI 490
            +H IW PIP  +KDYIA PK N YQSLHTT+I    E    LE+QIRT +M   AE G+
Sbjct: 291 NIHEIWNPIPGRIKDYIAMPKSNMYQSLHTTVIGPKGEP---LEIQIRTWDMHRTAEYGV 347

Query: 491 AAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSR 550
           AAH+                    R K    NN   A +ISWL  + EWQ++      + 
Sbjct: 348 AAHW--------------------RYKEGKKNNEKAAKKISWLRQLLEWQKDL---QDAT 384

Query: 551 EFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSP 610
           EF++T+  DL    VFVFTP+G++ +LP+ AT VD+AY IHTE+G+  V AKVN  LV  
Sbjct: 385 EFMETLKVDLFEDEVFVFTPQGDVISLPRDATPVDFAYNIHTEVGHSCVGAKVNDKLVPL 444

Query: 611 THVLANAEVVEIIT 624
            + L N ++VEI+T
Sbjct: 445 EYKLENGDIVEILT 458


>gi|314933798|ref|ZP_07841163.1| GTP diphosphokinase [Staphylococcus caprae C87]
 gi|313653948|gb|EFS17705.1| GTP diphosphokinase [Staphylococcus caprae C87]
          Length = 734

 Score =  336 bits (862), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 196/498 (39%), Positives = 293/498 (58%), Gaps = 49/498 (9%)

Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
           E L    SYLS +E E V ++  +A+EAH GQ R++G P+I+HP++VA IL E+ LD  +
Sbjct: 16  EVLHKAKSYLSASEYEYVLKSYHIAYEAHQGQFRKNGLPYIMHPIQVAGILTEMRLDGPT 75

Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
           I AG LHD +EDT   TFE +++ F   V RIV+G TK+ K+ K + K E       +A+
Sbjct: 76  IVAGFLHDVIEDTPY-TFEDVKDMFNEEVARIVDGVTKLKKV-KYRSKEEQ------QAE 127

Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
           + R++F+A+ ++VRVI+VKLADRLHNMRTL  MP  KQ  I+ ETL+++APLA  LG+  
Sbjct: 128 NHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQVRISKETLEIYAPLAHRLGINT 187

Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
           IK ELE+ +  Y ++  Y     R+ +L K+   E E      + KIE +  ++ M +  
Sbjct: 188 IKWELEDTALRYIDSVQYF----RIVNLMKKKRSEREAYIDNAINKIEAE--MEKMNLSG 241

Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
           EI    K  YSIY+ ++K +   +++  +  +RII+            +    CY +LGL
Sbjct: 242 EINGRPKHIYSIYRKMMKQKKQFDQIFDLLAIRIIV------------NSINDCYAILGL 289

Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
           VH +W P+P   KDYIA PK N YQSLHTT++     +   LE+QIRT EM  IAE G+A
Sbjct: 290 VHTLWKPMPGRFKDYIAMPKQNMYQSLHTTVVG---PNGDPLEIQIRTYEMHEIAEHGVA 346

Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
           AH++ +                  GKTV     +   +++WL   +E  E    +  ++E
Sbjct: 347 AHWAYK-----------------EGKTVNEKTQDFQNKLNWL---KELAETDRTSTDAQE 386

Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
           F++++  DL   +V+ FTP  ++  LP GA  +D+AY IH+E+GNKM+ AKVNG +V   
Sbjct: 387 FMESLKYDLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPID 446

Query: 612 HVLANAEVVEIITYNVSF 629
           +VL   +++EI T   S+
Sbjct: 447 YVLQTGDIIEIRTSKHSY 464


>gi|282600882|ref|ZP_05980016.2| GTP diphosphokinase [Subdoligranulum variabile DSM 15176]
 gi|282571256|gb|EFB76791.1| RelA/SpoT family protein [Subdoligranulum variabile DSM 15176]
          Length = 736

 Score =  336 bits (862), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 197/496 (39%), Positives = 286/496 (57%), Gaps = 55/496 (11%)

Query: 131 WEDLRPT-ISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDW 189
           ++DL+   +    P + E++ RA  LA +AH GQ+RRSGEP+I HP+ VA+IL EL +D 
Sbjct: 24  YDDLKKNMVDSGRPYDFEMIDRAYALAAQAHGGQRRRSGEPYICHPLSVAQILVELGMDS 83

Query: 190 ESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVK 249
           ESIAA L+HD  EDT V   E I+++FG  V  +V+G   V+KL ++K  N    V+D +
Sbjct: 84  ESIAAALMHDVAEDTPVTVAE-IKQKFGPEVALLVDG---VTKLTQIKFSN----VEDRQ 135

Query: 250 ADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGM 309
           A++LR+M LAM+++VRV+I+KL DRLHNMRT    P  K+   A ET++V+AP+A  LG+
Sbjct: 136 AENLRKMLLAMSQDVRVMIIKLCDRLHNMRTGDAWPEQKRRDKALETMEVYAPIAHRLGI 195

Query: 310 YQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKE-LEEANKILMKKIEDDQFLDLMT 368
             IK ELE+ S  Y +   Y  ++    DL  +H  E L +    + + + ++       
Sbjct: 196 SNIKEELEDRSLHYLDPIGYETIR----DLLNKHGDEFLHKVCHTIARHLAENGI----- 246

Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
            K  IR   K  Y IY+ +        E+  I  +RII++  P             CY  
Sbjct: 247 PKATIRHRVKSIYGIYRKMYMQNKDFEEIYDIYAVRIILENVPE------------CYTA 294

Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAER 488
           LGL+H ++ P+P   KDYI+TPKPNGYQSLHTT+I          EVQIRT +MD +AE 
Sbjct: 295 LGLIHDMYHPLPNRFKDYISTPKPNGYQSLHTTVIG---REAIPFEVQIRTWDMDRMAEY 351

Query: 489 GIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMT 548
           GIAAH+  +  +TG                   +N  +  R++W+  + E Q     +  
Sbjct: 352 GIAAHWKYKAGITGS------------------SNDKLDERLAWVRQLLESQR---SSAD 390

Query: 549 SREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLV 608
           + + +  I  DLL   VF FTPRG++ NLP GATV+D+AY IH+ +GN+M+ AKVN  +V
Sbjct: 391 ATDLLSDIKSDLLPEEVFAFTPRGDVINLPAGATVIDFAYAIHSAVGNRMIGAKVNNRIV 450

Query: 609 SPTHVLANAEVVEIIT 624
           S  H +   E++EI+T
Sbjct: 451 SIDHKVQTGEIIEILT 466


>gi|335428878|ref|ZP_08555788.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Haloplasma
           contractile SSD-17B]
 gi|335429314|ref|ZP_08556213.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Haloplasma
           contractile SSD-17B]
 gi|334890012|gb|EGM28294.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Haloplasma
           contractile SSD-17B]
 gi|334891819|gb|EGM30065.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Haloplasma
           contractile SSD-17B]
          Length = 727

 Score =  336 bits (862), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 195/497 (39%), Positives = 288/497 (57%), Gaps = 49/497 (9%)

Query: 134 LRPTISYLSPNE-LELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESI 192
           L  +  Y+   E + +++RA   A E H  Q R+SGEP+IIHP+EV+ IL       ++I
Sbjct: 12  LEASSVYIKKEENINIIKRAYQYAKEKHAKQIRKSGEPYIIHPIEVSLILTSFHAGPKTI 71

Query: 193 AAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADD 252
           AAGL+HD +EDT V T E + + FG  +  +V+G   V+KLG++K      S +  +A +
Sbjct: 72  AAGLMHDVLEDTEV-TEEEMADLFGNEITTLVDG---VTKLGQIKYV----SKEQAQAKN 123

Query: 253 LRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQI 312
            ++MFLAM +++RVII+KLADRLHNMRTL HMP HKQ  I+ ETL +FAP+A  LGMY++
Sbjct: 124 HQKMFLAMAKDIRVIIIKLADRLHNMRTLKHMPRHKQVRISKETLGIFAPIAHRLGMYRL 183

Query: 313 KSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTE 372
           KSELE+    + + E+Y      +A L    ++E E+    ++ +I+    L    +K  
Sbjct: 184 KSELEDRCLRFIDPEEYY----YIASLINTKQREREDDIDSIINEIKG--CLKEQDIKFA 237

Query: 373 IRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLV 432
           I+   K  +S++K + +     +E+  +  LRII+  +              CY VLGL+
Sbjct: 238 IKGRIKNIFSVHKKMREKNKEFSEIFDLLALRIIVDDEAS------------CYQVLGLI 285

Query: 433 HGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAA 492
           H  W PIP+  KDYIA PKPN YQSLHTT+I  L   +F  EVQIRT EMDL+AE G+AA
Sbjct: 286 HSNWKPIPKRFKDYIAMPKPNMYQSLHTTIIA-LNGKIF--EVQIRTNEMDLVAEYGVAA 342

Query: 493 HYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREF 552
           H++                +     T       I  ++ W   + E+ E    N  + +F
Sbjct: 343 HWA---------------YKESEAHTAEQEQVEIQKKLKWYREMVEYSE----NSDAEDF 383

Query: 553 VDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTH 612
           ++ I  D++ + V+VFTP G++ + P GAT +D+AY IH+E+GNK V A VNG +V  T+
Sbjct: 384 MELIKDDIISANVYVFTPEGDVLDFPNGATPIDFAYRIHSEVGNKTVGAIVNGKIVPLTY 443

Query: 613 VLANAEVVEIITYNVSF 629
            +   +V+EI T   SF
Sbjct: 444 QMKTGDVIEIKTSKQSF 460


>gi|295695639|ref|YP_003588877.1| (p)ppGpp synthetase I SpoT/RelA [Kyrpidia tusciae DSM 2912]
 gi|295411241|gb|ADG05733.1| (p)ppGpp synthetase I, SpoT/RelA [Kyrpidia tusciae DSM 2912]
          Length = 739

 Score =  336 bits (862), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 196/509 (38%), Positives = 296/509 (58%), Gaps = 52/509 (10%)

Query: 123 KEDSPERLWEDLRPTI-SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARI 181
           K D  ER ++ L   +  Y    E+  +R A  LA  AH GQKR SGE +I+HP+ V  I
Sbjct: 17  KPDPAERAFDLLCEKVRGYAEDGEILRLREAYTLAKAAHAGQKRSSGEDYILHPIAVTEI 76

Query: 182 LGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNE 241
           L +L LD  ++ A LLHD VEDT V T E I + FG  V  +V+G TK+ ++       +
Sbjct: 77  LADLHLDGTTLTAALLHDVVEDTPV-TLEEIGKRFGPEVVALVDGVTKLRRI-------Q 128

Query: 242 NHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFA 301
             + ++ +A++LR+M LAM +++RVI++KLADRLHNMRTL H+P  KQ  IA ETL++FA
Sbjct: 129 YATREEQQAENLRKMLLAMAKDIRVILIKLADRLHNMRTLRHVPEQKQMRIAKETLEIFA 188

Query: 302 PLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDD 361
           PLA  LG+ +I+ ELE+L+  Y N + Y ++   +    +E E  +++    L +K    
Sbjct: 189 PLAHRLGISRIQWELEDLALRYLNPQQYYRIANLMTKKRREREAYIQKVIDTLREK---- 244

Query: 362 QFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSP 421
            F++L  +K +I    K  YS+Y+ ++       E+  +  +R+I+              
Sbjct: 245 -FVEL-NIKADISGRPKHIYSVYRKMVNQNKQFGEIYDLLAVRVIV------------DN 290

Query: 422 QQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEE 481
            + CY +LG+VH +W P+P   KDYIA PKPN YQSLHTT+I    E    LE+QIRT E
Sbjct: 291 IKDCYAILGVVHTLWRPLPGRFKDYIAMPKPNMYQSLHTTVIGPQGEP---LEIQIRTWE 347

Query: 482 MDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQE 541
           M   AE GIAAH+   ++  G             G+T   ++ +   +++W   I EWQ+
Sbjct: 348 MHRTAEYGIAAHW---LYKQG-------------GRT---SDPSFQQKLAWFREILEWQQ 388

Query: 542 EFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAA 601
           +F     +++F++T+  DL    VFVFTP+G++  LP G+  +D+AY IHT+IGN+ V A
Sbjct: 389 DF---RDAQDFMETLKVDLFSDEVFVFTPKGDVVALPTGSVPIDFAYRIHTDIGNRCVGA 445

Query: 602 KVNGNLVSPTHVLANAEVVEIITYNVSFS 630
           +VNG +V   + L   ++VEI+T   S+ 
Sbjct: 446 RVNGRIVPLDYQLKTGDIVEILTSKHSYG 474


>gi|449960124|ref|ZP_21810516.1| putative stringent response protein [Streptococcus mutans 4VF1]
 gi|450139804|ref|ZP_21872676.1| putative stringent response protein [Streptococcus mutans NLML1]
 gi|449167983|gb|EMB70830.1| putative stringent response protein [Streptococcus mutans 4VF1]
 gi|449232522|gb|EMC31631.1| putative stringent response protein [Streptococcus mutans NLML1]
          Length = 740

 Score =  336 bits (862), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 189/491 (38%), Positives = 289/491 (58%), Gaps = 49/491 (9%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++  ++  V++AL  A E H GQ R+SGEP+IIHP++VA IL +L LD  +++ G LHD
Sbjct: 19  YMNKADIAFVQKALDYATECHSGQFRKSGEPYIIHPIQVAGILADLHLDAITVSCGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            +EDT   T + +E +FG+ V+ IV+G   V+KLGK++ K+    +    A++ R+M +A
Sbjct: 79  VIEDTEA-TLDHLEAKFGSDVKNIVDG---VTKLGKVEYKSHEEQL----AENHRKMLMA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M++++RVI+VKLADRLHNMRTL H+   KQ  I+ ET++++APLA  LG+ +IK ELE+L
Sbjct: 131 MSKDIRVILVKLADRLHNMRTLRHLRKDKQERISRETMEIYAPLAHRLGISRIKWELEDL 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           +F Y N  ++ K    ++ L  E  +E E     ++ KI+   + +   +  EI    K 
Sbjct: 191 AFRYLNEVEFYK----ISHLMNEKRREREALVDDIVDKIK--AYAEEQGLHGEIYGRPKH 244

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIY+ +   +   +++  +  +R I+              Q   Y +LG +H +W P+
Sbjct: 245 IYSIYRKMRDKKKRFDQIYDLIAIRCIL------------DTQSDVYAMLGYIHELWRPM 292

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK NGYQS+HTT    +Y     +EVQIRT EM  +AE G+AAH++ +  
Sbjct: 293 PGRFKDYIANPKANGYQSIHTT----VYGPKGPIEVQIRTHEMHQVAEYGVAAHWAYKKG 348

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
           + G V                 N+   AL ++W+  + E Q+   GN    +FVD++  D
Sbjct: 349 IKGKV-----------------NSQESALGMNWIKELVELQDASNGNAV--DFVDSVKED 389

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           +   R++VFTP G ++ LPK +  +D+AY IHT++G K   AKVNG +V  T  L   +V
Sbjct: 390 IFAERIYVFTPNGAVQELPKDSGPIDFAYAIHTQVGEKATGAKVNGRMVPLTAKLKTGDV 449

Query: 620 VEIITYNVSFS 630
           VEIIT + SF 
Sbjct: 450 VEIITNSNSFG 460


>gi|418412040|ref|ZP_12985305.1| GTP pyrophosphokinase [Staphylococcus epidermidis BVS058A4]
 gi|410890054|gb|EKS37854.1| GTP pyrophosphokinase [Staphylococcus epidermidis BVS058A4]
          Length = 729

 Score =  336 bits (862), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 193/491 (39%), Positives = 291/491 (59%), Gaps = 49/491 (9%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           SYLS +E E V ++  +A+EAH GQ R++G P+I+HP++VA IL E+ LD  +I AG LH
Sbjct: 18  SYLSTSEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPTIVAGFLH 77

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D +EDT+  TFE +++ F   + RIV+G TK+ K+ K + K E       +A++ R++F+
Sbjct: 78  DVIEDTSY-TFEDVKDMFNEEIARIVDGVTKLKKV-KYRSKEEQ------QAENHRKLFI 129

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           A+ ++VRVI+VKLADRLHNMRTL  MP  KQ  I+ ETL+++APLA  LG+  IK ELE+
Sbjct: 130 AIAKDVRVILVKLADRLHNMRTLKAMPREKQVRISKETLEIYAPLAHRLGINTIKWELED 189

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
            +  Y ++  Y     R+ +L K+   E E      + KIE++  +  M +  EI    K
Sbjct: 190 TALRYIDSVQYF----RIVNLMKKKRSEREAYITNAINKIENE--MTNMNLSGEINGRPK 243

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIY+ ++K +   +++  +  +RII+            +    CY  LGLVH +W P
Sbjct: 244 HIYSIYRKMIKQKKQFDQIFDLLAIRIIV------------NSINDCYATLGLVHTLWKP 291

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PK N YQSLHTT++     +   LE+QIRT EM  IAE G+AAH++ + 
Sbjct: 292 MPGRFKDYIAMPKQNMYQSLHTTVVG---PNGDPLEIQIRTHEMHEIAEHGVAAHWAYK- 347

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                            GKTV     +   +++WL   +E  E    +  ++EF++++  
Sbjct: 348 ----------------EGKTVNQKTQDFQNKLNWL---KELAETDHTSADAQEFMESLKY 388

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           DL   +V+ FTP  ++  LP GA  +D+AY IH+E+GNKM+ AKVNG +V   +VL   +
Sbjct: 389 DLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPIDYVLQTGD 448

Query: 619 VVEIITYNVSF 629
           ++EI T   S+
Sbjct: 449 IIEIRTSKHSY 459


>gi|306490820|gb|ADM94941.1| guanosine polyphosphate pyrophosphohydrolase/synthetases
           [uncultured candidate division JS1 bacterium]
          Length = 724

 Score =  336 bits (861), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 196/490 (40%), Positives = 284/490 (57%), Gaps = 50/490 (10%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           SY    +++ +R+A + + +AH  QKR SG+P++ HP+ VA IL +L +D  +I AGLLH
Sbjct: 19  SYNPDADIDFLRKAYIFSQQAHQNQKRYSGQPYLSHPLGVADILADLNMDIITIVAGLLH 78

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT V   E IE+ FGA V  +V G TK+SK+   K K E        A++ R+MFL
Sbjct: 79  DVVEDTQV-NLEEIEQVFGAEVAMLVNGVTKLSKIS-FKTKEERQ------AENFRKMFL 130

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           A+ E++RVI++KLADRL+NMRTL ++P  K+   A ETL ++ P+A  LG+Y++K ELE+
Sbjct: 131 AIAEDIRVILIKLADRLNNMRTLKYVPAPKRLKKAKETLDIYVPIANRLGLYRVKWELED 190

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
            + +  +   Y ++ R+VA    E EK +EE  K ++++++         +K  I+   K
Sbjct: 191 YALLNLDPRKYNELARKVAKSRAEREKYIEEVKKRIVEELQK------FGIKARIQGRPK 244

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIYK + +      ++  +  +RII            C+    CY  LGL+H +W P
Sbjct: 245 NIYSIYKKMEEQDKDFFQIYDLMAIRII------------CNSITDCYASLGLLHSLWKP 292

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PK N YQSLHTT+I    E    LEVQIRTEEM   AE GIAAH+    
Sbjct: 293 MPGRFKDYIAMPKSNMYQSLHTTVITSEGEP---LEVQIRTEEMHRTAEYGIAAHWKY-- 347

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                           + K   L ++    R++WL  I +WQ+E    +   EF++ +  
Sbjct: 348 ----------------KEKGDFLKDSKFEERLTWLRQILDWQKELKDPL---EFMENLKI 388

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           DLL   V+ FTP+G++K LP G+T VD+AY IHTEIG++ V AKVN  +V     L + +
Sbjct: 389 DLLQYEVYTFTPKGDVKVLPLGSTPVDFAYAIHTEIGHRCVGAKVNNKIVPLDRELKSGD 448

Query: 619 VVEIITYNVS 628
           +VEIIT   S
Sbjct: 449 IVEIITSKTS 458


>gi|342213759|ref|ZP_08706478.1| GTP diphosphokinase [Veillonella sp. oral taxon 780 str. F0422]
 gi|341597347|gb|EGS39906.1| GTP diphosphokinase [Veillonella sp. oral taxon 780 str. F0422]
          Length = 741

 Score =  336 bits (861), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 186/486 (38%), Positives = 282/486 (58%), Gaps = 51/486 (10%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           SYL   +  ++ RA  LA +AH  QKR SGEP+I+HP+ VA IL EL++D  ++ + LLH
Sbjct: 28  SYLPEEDWPVIERAFALADKAHAPQKRASGEPYILHPLGVATILSELQIDRSTLVSALLH 87

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT + + E IEE+FG  V  +V+G TK+++  + + K E       + ++ R+M L
Sbjct: 88  DVVEDTEI-SLEEIEEQFGPEVAFLVDGVTKLNQF-QYQTKEEQ------QIENYRKMIL 139

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM ++VRV+++KL DRLHNMRTL HM P KQ  IA ETL++FAPLA  LG++ IK ELE+
Sbjct: 140 AMAKDVRVVVIKLGDRLHNMRTLKHMRPDKQQRIAQETLEIFAPLAHRLGIFNIKWELED 199

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
           LSF Y   E Y  + +++++  +  E  + +    L   +E         +K +++   K
Sbjct: 200 LSFRYLEPEKYYDLVQQMSEKRQAREDIVNDTMNTLKDALEHAH------IKADVKGRPK 253

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIYK + K    ++++  +  +R+I+   P             CY VLG VH +W P
Sbjct: 254 HFYSIYKKMKKDNRDLSQIYDLYAVRVIVDTIPD------------CYAVLGTVHSLWKP 301

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PK N YQSLHTT+I    +    +E+QIRT +M  ++E G+AAH+    
Sbjct: 302 LPYRFKDYIAMPKSNMYQSLHTTVIGTKGQP---VEIQIRTWDMHRVSEYGVAAHWR--- 355

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
           +  G  G A                A+   ++ W+  + EWQ+        +E ++ +  
Sbjct: 356 YKEGNKGKA---------------EADFDAKVGWIRHVLEWQDA----SDPKELLNALKL 396

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           D+    VFVFTP+G++  LPKG   +D+AY +HT++GNK V AK+NG +V   + L N +
Sbjct: 397 DVFTGEVFVFTPKGDVMKLPKGTVPLDFAYRVHTDVGNKCVGAKINGKIVPLDYELQNGD 456

Query: 619 VVEIIT 624
           +VEI+T
Sbjct: 457 IVEIVT 462


>gi|395242383|ref|ZP_10419380.1| GTP diphosphokinase [Lactobacillus pasteurii CRBIP 24.76]
 gi|394480115|emb|CCI85620.1| GTP diphosphokinase [Lactobacillus pasteurii CRBIP 24.76]
          Length = 743

 Score =  336 bits (861), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 194/485 (40%), Positives = 285/485 (58%), Gaps = 49/485 (10%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++  +L  V++A   A +AH+GQ R SG+P+IIHP +VA  L  L LD ++IAAG LHD
Sbjct: 19  YMTDEQLAFVKKAYNYANKAHEGQTRASGQPYIIHPTQVAGTLANLGLDQDTIAAGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
           TVEDT  VT + I++EFG  V  IV+G   V+KL K + K    S Q+  A++ R+M +A
Sbjct: 79  TVEDT-PVTNDDIKKEFGEDVAFIVDG---VTKLNKYQYK----SHQEFLAENHRKMLIA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M +++RVI+VKLADRLHNM TL+H+ P KQ  IA+ET+ ++APLA  LG+  IK ELE++
Sbjct: 131 MAKDLRVIMVKLADRLHNMHTLNHLRPDKQRRIASETMDIYAPLADRLGIGTIKWELEDM 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           SF Y N + Y ++   +     E E  + E   +L K       LD + +K E+    K 
Sbjct: 191 SFHYLNPDAYYRIVSLMDLKRSERESYIAETISVLKKT------LDSLGIKYEVYGRPKH 244

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIYK ++      NE+  +  +R+++K              + CY VLG VH  W P+
Sbjct: 245 IYSIYKKMVDKHKDFNEIYDLLAVRVLVK------------NVRDCYAVLGAVHTEWKPM 292

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK NGYQSLHTT+I         LE+QIRTE+M  +AE G+AAH++ +  
Sbjct: 293 PGRFKDYIAVPKVNGYQSLHTTIIG---PGGKPLEIQIRTEQMHQVAEYGVAAHWAYK-- 347

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
                          RG    +  ++   ++  +  I E ++E      + EF+ ++  D
Sbjct: 348 ---------------RGNFSGVQASSSGEKLDMVREILELKDE---TKDADEFMRSVKSD 389

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           +   RV+VFTP+GE+  LPKG+  +D+A+ IHT++G+  V AK+N  LV   + L N +V
Sbjct: 390 IFSDRVYVFTPKGEVYELPKGSVTLDFAFEIHTQVGSHAVGAKINNKLVPLDYKLKNGDV 449

Query: 620 VEIIT 624
           +EI+T
Sbjct: 450 IEIMT 454


>gi|336054243|ref|YP_004562530.1| PpGpp synthetase [Lactobacillus kefiranofaciens ZW3]
 gi|333957620|gb|AEG40428.1| PpGpp synthetase [Lactobacillus kefiranofaciens ZW3]
          Length = 746

 Score =  336 bits (861), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 196/485 (40%), Positives = 282/485 (58%), Gaps = 49/485 (10%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++ +++  V +A   A +AH GQKR SG+P+IIHP +VA  L  L LD +++AAG LHD
Sbjct: 19  YMNDDQVAFVEKAYEFADKAHAGQKRASGQPYIIHPTQVAGTLATLGLDPDTVAAGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
           TVEDT  VT + ++E+FG  V  IV+G TK++K        E  S Q+  A++ R+M +A
Sbjct: 79  TVEDT-PVTNDELKEKFGEDVAFIVDGVTKLNKY-------EYKSHQEFLAENHRKMLIA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M +++RVI+VKLADRLHNM TL H+ P KQ  IA+ET+ ++APLA  LG+  IK ELE++
Sbjct: 131 MAKDLRVIMVKLADRLHNMHTLQHLRPDKQRRIASETMDIYAPLADRLGIGTIKWELEDM 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           SF Y N E Y ++   +     + EK + +  K L K       LD + +K EI    K 
Sbjct: 191 SFHYLNPEAYYRIVNLMDVKRSQREKYIADTIKTLKKT------LDELGIKYEIYGRPKH 244

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIYK ++      +E+  +  +R I+K              + CY VLG VH  W P+
Sbjct: 245 IYSIYKKMVNKHKDFDEIYDLLAVRAIVK------------NVRDCYAVLGAVHTEWKPM 292

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK NGYQSLHTT+I         LE+QIRTE+M  +AE G+AAH++ +  
Sbjct: 293 PGRFKDYIAMPKVNGYQSLHTTIIG---PGGRPLEIQIRTEQMHEVAEYGVAAHWAYK-- 347

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
                          RG    +   +   ++  +  I E ++E      + EF+ ++  D
Sbjct: 348 ---------------RGNFSGVQTTSSGEKLDMVREILELKDE---TKDAGEFMKSVKSD 389

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           +   RV+VFTPRGE+  LPKG+  +D+AY IHT++G+  V AKVN  LV   + L N +V
Sbjct: 390 IFSDRVYVFTPRGEVYELPKGSVTLDFAYAIHTQVGSHAVGAKVNNKLVPLDYKLRNGDV 449

Query: 620 VEIIT 624
           +EI+T
Sbjct: 450 IEIMT 454


>gi|227903817|ref|ZP_04021622.1| GTP diphosphokinase [Lactobacillus acidophilus ATCC 4796]
 gi|227868704|gb|EEJ76125.1| GTP diphosphokinase [Lactobacillus acidophilus ATCC 4796]
          Length = 749

 Score =  336 bits (861), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 195/485 (40%), Positives = 284/485 (58%), Gaps = 49/485 (10%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++ +++  V RA   A +AH GQKR SG+P+IIHP +VA  L  L LD ++IAAG LHD
Sbjct: 22  YMNEDQVAFVERAYEFANKAHAGQKRASGQPYIIHPTQVAGTLANLGLDPDTIAAGFLHD 81

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
           TVEDT  VT + ++E+FG  V  IV+G TK++K        E +S Q+  A++ R+M +A
Sbjct: 82  TVEDT-PVTNDELKEKFGEDVSFIVDGVTKLNKY-------EYNSHQEFLAENHRKMLIA 133

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M +++RVI+VKLADRLHNM TL H+ P KQ  IA+ET+ ++APLA  LG+  IK ELE++
Sbjct: 134 MAKDLRVIMVKLADRLHNMHTLQHLRPDKQRRIASETMDIYAPLADRLGIGTIKWELEDM 193

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           SF Y N E Y ++   +     + EK + +  K L K       LD + +K +I    K 
Sbjct: 194 SFHYLNPEAYYRIVNLMDVKRSQREKYISDTIKTLKKT------LDELGIKYDIYGRPKH 247

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIYK ++      +E+  +  +R+I+K              + CY VLG VH  W P+
Sbjct: 248 IYSIYKKMVNKHKDFDEIYDLLAVRVIVK------------NVRDCYAVLGAVHTEWKPM 295

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK NGYQSLHTT+I         LE+QIRTE+M  +AE G+AAH++ +  
Sbjct: 296 PGRFKDYIAMPKVNGYQSLHTTIIG---PGGRPLEIQIRTEQMHEVAEYGVAAHWAYK-- 350

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
                          RG    +   +   ++  +  I E ++E      + EF+ ++  D
Sbjct: 351 ---------------RGNFNGVEATSSGEKLDMVREILELKDE---TKDAGEFMKSVKSD 392

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           +   RV+VFTP+GE+  LPKG+  +D+AY IHT++G+  V A+VN  LV   + L N +V
Sbjct: 393 IFSDRVYVFTPKGEVYELPKGSVTLDFAYAIHTQVGSHAVGARVNNKLVPLDYKLRNGDV 452

Query: 620 VEIIT 624
           +EI+T
Sbjct: 453 IEIMT 457


>gi|402301240|ref|ZP_10820621.1| GTP pyrophosphokinase [Bacillus alcalophilus ATCC 27647]
 gi|401723656|gb|EJS97105.1| GTP pyrophosphokinase [Bacillus alcalophilus ATCC 27647]
          Length = 728

 Score =  336 bits (861), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 193/498 (38%), Positives = 292/498 (58%), Gaps = 53/498 (10%)

Query: 134 LRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIA 193
           L     YL   ++  +++A + A +AH GQ R+SGEP+I+HP++VA I+ EL+LD  ++A
Sbjct: 7   LEKASQYLGEKDVAFLQKAYLYAEKAHSGQYRKSGEPYILHPIQVAGIIIELQLDPNTVA 66

Query: 194 AGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDL 253
           A  LHD VEDT+V + E IEEEF   V  +V+G TK+ K      + +       +A++ 
Sbjct: 67  AAFLHDVVEDTDV-SIEDIEEEFNGQVAMLVDGVTKLKKFKYKSKEEQ-------QAENH 118

Query: 254 RQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIK 313
           R+M +AM +++RVI++KLADRLHNMRTL +MPP KQ   + ETL++FAPLA  LG+  IK
Sbjct: 119 RKMLIAMAKDIRVIMIKLADRLHNMRTLKYMPPEKQRVTSNETLEIFAPLAHRLGISTIK 178

Query: 314 SELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEI 373
            ELE+ +  Y + + Y     R+ +L K+   E EE    +M++I+ D  L  + +  EI
Sbjct: 179 WELEDTALRYLDPQQYY----RIVNLMKKKRAEREEYLSDVMERIDGD--LKDVFIGAEI 232

Query: 374 RSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI--CYHVLGL 431
               K  YSIY+ ++      NE+  +  +RII+              Q I  CY VLG+
Sbjct: 233 SGRPKHIYSIYRKMVLQNKQFNEIYDLLAVRIIV--------------QNIKDCYAVLGV 278

Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
           +H +W P+P   KDYIA PK N YQSLHTT++    +    LEVQIRTEEM  +AE G+A
Sbjct: 279 IHTLWKPMPGRFKDYIAMPKANMYQSLHTTVVGPHGDP---LEVQIRTEEMHRVAEFGVA 335

Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
           AH++ +                  GK V   +     ++SW   + E Q +      ++E
Sbjct: 336 AHWAYK-----------------EGKAVDPKSDTFEDKLSWFRDVIESQND---TNDAQE 375

Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
           F++++  DL    VFVFTP+G++  LP+G+  +D+AY IH+EIGN+ + AKVNG +V+  
Sbjct: 376 FMESLKMDLFSDMVFVFTPKGDVIELPRGSVPLDFAYRIHSEIGNRCIGAKVNGKMVTLD 435

Query: 612 HVLANAEVVEIITYNVSF 629
           H L   ++V+++T   S+
Sbjct: 436 HELKTGDIVDVMTSKHSY 453


>gi|242373934|ref|ZP_04819508.1| GTP pyrophosphokinase [Staphylococcus epidermidis M23864:W1]
 gi|242348358|gb|EES39960.1| GTP pyrophosphokinase [Staphylococcus epidermidis M23864:W1]
          Length = 734

 Score =  336 bits (861), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 196/498 (39%), Positives = 291/498 (58%), Gaps = 49/498 (9%)

Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
           E L    SYLS +E E V ++  +A+EAH GQ R++G P+I+HP++VA IL E+ LD  +
Sbjct: 16  EVLHKAKSYLSASEYEYVLKSYHIAYEAHQGQFRKNGLPYIMHPIQVAGILTEMRLDGPT 75

Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
           I AG LHD +EDT   TFE ++  F   V RIV+G TK+ K+ K + K E       +A+
Sbjct: 76  IVAGFLHDVIEDTPY-TFEDVKSMFNEEVARIVDGVTKLKKV-KYRSKEEQ------QAE 127

Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
           + R++F+A+ ++VRVI+VKLADRLHNMRTL  MP  KQ  I+ ETL+++APLA  LG+  
Sbjct: 128 NHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQVRISKETLEIYAPLAHRLGINT 187

Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
           IK ELE+ +  Y ++  Y     R+ +L K+   E E      + KIE +  +D M +  
Sbjct: 188 IKWELEDTALRYIDSVQYF----RIVNLMKKKRSEREAYIANAISKIEAE--MDKMKLSG 241

Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
           EI    K  YSIY+ ++K +   +++  +  +R+I+            +    CY +LGL
Sbjct: 242 EISGRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV------------NSINDCYAILGL 289

Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
           VH +W P+P   KDYIA PK N YQSLHTT++     +   LE+QIRT EM  IAE G+A
Sbjct: 290 VHTLWKPMPGRFKDYIAMPKQNMYQSLHTTVVG---PNGDPLEIQIRTYEMHEIAEHGVA 346

Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
           AH++ +                  GKTV     +   +++WL   +E  E       ++E
Sbjct: 347 AHWAYK-----------------EGKTVNEKTQDFQNKLNWL---KELAETDHTTTDAQE 386

Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
           F++++  DL   +V+ FTP  ++  LP GA  +D+AY IH+E+GNKM+ AKVNG +V   
Sbjct: 387 FMESLKYDLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPID 446

Query: 612 HVLANAEVVEIITYNVSF 629
           +VL   +++EI T   S+
Sbjct: 447 YVLQTGDIIEIRTSKHSY 464


>gi|260101667|ref|ZP_05751904.1| GTP diphosphokinase [Lactobacillus helveticus DSM 20075]
 gi|260084527|gb|EEW68647.1| GTP diphosphokinase [Lactobacillus helveticus DSM 20075]
          Length = 746

 Score =  336 bits (861), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 195/485 (40%), Positives = 283/485 (58%), Gaps = 49/485 (10%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++ +++  V +A   A +AH GQKR SG+P+IIHP +VA  L  L LD ++I AG LHD
Sbjct: 19  YMNDDQVAFVEKAYEFANKAHAGQKRASGQPYIIHPTQVAGTLATLGLDPDTIVAGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
           TVEDT  VT + ++E+FG  V  IV+G TK++K        E  S Q+  A++ R+M +A
Sbjct: 79  TVEDT-PVTNDELKEKFGEDVTFIVDGVTKLNKY-------EYKSHQEFLAENHRKMLIA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M +++RVI+VKLADRLHNM TL H+ P KQ  I++ET+ ++APLA  LG+  IK ELE++
Sbjct: 131 MAKDLRVIMVKLADRLHNMHTLQHLRPDKQRWISSETMDIYAPLADRLGIGTIKWELEDM 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           SF Y N E Y ++   +     + EK + +  K L K       LD + +K EI    K 
Sbjct: 191 SFHYLNPEAYYRIVNLMDVKRSQREKYIADTIKTLKKT------LDELGIKYEIYGRPKH 244

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIYK ++      +E+  +  +R+I+K              + CY VLG VH  W P+
Sbjct: 245 IYSIYKKMVNKHKDFDEIYDLLAVRVIVK------------NVRDCYAVLGAVHTEWKPM 292

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK NGYQSLHTT+I         LE+QIRTE+M  +AE G+AAH++ +  
Sbjct: 293 PGRFKDYIAMPKVNGYQSLHTTIIG---PGGRPLEIQIRTEQMHEVAEYGVAAHWAYK-- 347

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
                          RG    +  ++   ++  +  I E ++E      + EF+ ++  D
Sbjct: 348 ---------------RGNFTGVQESSSGEKLDMVREILELKDE---TKDAGEFMKSVKSD 389

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           +   RV+VFTP+GE+  LPKG+  +D+AY IHT++GN  V AKVN  LV   + L N +V
Sbjct: 390 IFSDRVYVFTPKGEVYELPKGSVTLDFAYAIHTQVGNHAVGAKVNNKLVPLDYKLRNGDV 449

Query: 620 VEIIT 624
           +EI+T
Sbjct: 450 IEIMT 454


>gi|416125363|ref|ZP_11595961.1| GTP pyrophosphokinase [Staphylococcus epidermidis FRI909]
 gi|319400960|gb|EFV89179.1| GTP pyrophosphokinase [Staphylococcus epidermidis FRI909]
          Length = 729

 Score =  336 bits (861), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 192/491 (39%), Positives = 292/491 (59%), Gaps = 49/491 (9%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           SYLS +E E V ++  +A+EAH GQ R++G P+I+HP++VA IL E+ LD  +I AG LH
Sbjct: 18  SYLSTSEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMHLDGPTIVAGFLH 77

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D +EDT+  TFE +++ F   + RIV+G TK+ K+ K + K E       +A++ R++F+
Sbjct: 78  DVIEDTSY-TFEDVKDMFNEEIARIVDGVTKLKKV-KYRSKEEQ------QAENHRKLFI 129

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           A+ ++VRVI+VKLADRLHNMRTL  MP  KQ  I+ ETL+++APLA  LG+  IK ELE+
Sbjct: 130 AIAKDVRVILVKLADRLHNMRTLKAMPREKQVRISKETLEIYAPLAHRLGINTIKWELED 189

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
            +  Y ++  Y     R+ +L K+   E E      + KI+++  +  M++  EI    K
Sbjct: 190 TALRYIDSVQYF----RIVNLMKKKRSERESYITNAINKIKNE--MTKMSLSGEINGRPK 243

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIY+ ++K +   +++  +  +RII+            +    CY  LGLVH +W P
Sbjct: 244 HIYSIYRKMIKQKKQFDQIFDLLAIRIIV------------NSINDCYATLGLVHTLWKP 291

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PK N YQSLHTT++     +   LE+QIRT EM  IAE G+AAH++ + 
Sbjct: 292 MPGRFKDYIAMPKQNMYQSLHTTVVG---PNGDPLEIQIRTHEMHEIAEHGVAAHWAYK- 347

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                            GKTV     +   +++WL   +E  E    +  ++EF++++  
Sbjct: 348 ----------------EGKTVNQKTQDFQNKLNWL---KELAETDHTSADAQEFMESLKY 388

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           DL   +V+ FTP  ++  LP GA  +D+AY IH+E+GNKM+ AKVNG +V   +VL   +
Sbjct: 389 DLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPIDYVLQTGD 448

Query: 619 VVEIITYNVSF 629
           ++EI T   S+
Sbjct: 449 IIEIRTSKHSY 459


>gi|418963994|ref|ZP_13515820.1| RelA/SpoT family protein [Streptococcus anginosus subsp. whileyi
           CCUG 39159]
 gi|383342165|gb|EID20399.1| RelA/SpoT family protein [Streptococcus anginosus subsp. whileyi
           CCUG 39159]
          Length = 738

 Score =  336 bits (861), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 194/494 (39%), Positives = 292/494 (59%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YLS  ++ LV++AL+ A + H GQ R+SGEP+IIHP++VA IL +L+LD  S+A G 
Sbjct: 16  TRKYLSSEDVALVQKALVYAVDRHRGQFRQSGEPYIIHPIQVAGILAKLKLDAISVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDTN  T + +E EFG  VR IV+G   V+KLGK+K  +    +    A++ R+M
Sbjct: 76  LHDVVEDTNA-TLDDLEREFGHDVRMIVDG---VTKLGKVKYMSHEEQL----AENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM++++RVI+VKLADRLHNMRTL H+   KQ  I+ ET++++APLA  LG+  +K EL
Sbjct: 128 LMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISSVKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+L+F Y N  ++ K    ++ L KE  +E EE    ++ KIE   +     +  EI   
Sbjct: 188 EDLAFRYLNPTEFYK----ISHLMKEKRREREELVDEVVHKIE--TYASERNLHGEIYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSIY+ +   +   +E+  +  +R I+              Q   Y +LG +H +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFDEIYDLIAIRCIL------------DTQSDVYAMLGYIHELW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA  K NGYQS+HTT    +Y     +E QIRT+EM  +AE G+AAH++ 
Sbjct: 290 RPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  + G V                 ++   A+ ++W+  + E Q++   +  +++FVD++
Sbjct: 346 KKGIKGQV-----------------DSKESAIGMNWIKEMMELQDQ---SNDAQDFVDSV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             + L   ++VFTP G +++LPK +  +D+AY IHT++G K V AKVNG +V  T  L  
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKAVGAKVNGRMVPLTTKLKT 445

Query: 617 AEVVEIITYNVSFS 630
            + VEIIT   SF 
Sbjct: 446 GDQVEIITSTNSFG 459


>gi|450159620|ref|ZP_21879551.1| putative stringent response protein [Streptococcus mutans 66-2A]
 gi|449241028|gb|EMC39675.1| putative stringent response protein [Streptococcus mutans 66-2A]
          Length = 740

 Score =  336 bits (861), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 188/491 (38%), Positives = 289/491 (58%), Gaps = 49/491 (9%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++  ++  V++AL  A E H GQ R+SGEP+I+HP++VA IL +L LD  +++ G LHD
Sbjct: 19  YMNKADIAFVQKALDYATECHSGQFRKSGEPYIVHPIQVAGILADLHLDAITVSCGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            +EDT   T + +E +FG+ V+ IV+G   V+KLGK++ K+    +    A++ R+M +A
Sbjct: 79  VIEDTEA-TLDHLEAKFGSDVKNIVDG---VTKLGKVEYKSHEEQL----AENHRKMLMA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M++++RVI+VKLADRLHNMRTL H+   KQ  I+ ET++++APLA  LG+ +IK ELE+L
Sbjct: 131 MSKDIRVILVKLADRLHNMRTLRHLRKDKQERISRETMEIYAPLAHRLGISRIKWELEDL 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           +F Y N  ++ K    ++ L  E  +E E     ++ KI+   + +   +  EI    K 
Sbjct: 191 AFRYLNEVEFYK----ISHLMNEKRREREALVDDIVDKIK--AYTEEQGLHGEIYGRPKH 244

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIY+ +   +   +++  +  +R I+              Q   Y +LG +H +W P+
Sbjct: 245 IYSIYRKMRDKKKRFDQIYDLIAIRCIL------------DTQSDVYAMLGYIHELWRPM 292

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK NGYQS+HTT    +Y     +EVQIRT EM  +AE G+AAH++ +  
Sbjct: 293 PGRFKDYIANPKANGYQSIHTT----VYGPKGPIEVQIRTHEMHQVAEYGVAAHWAYKKG 348

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
           + G V                 N+   AL ++W+  + E Q+   GN    +FVD++  D
Sbjct: 349 IKGKV-----------------NSQESALGMNWIKELVELQDASNGNAV--DFVDSVKED 389

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           +   R++VFTP G ++ LPK +  +D+AY IHT++G K   AKVNG +V  T  L   +V
Sbjct: 390 IFAERIYVFTPNGAVQELPKDSGPIDFAYAIHTQVGEKATGAKVNGRMVPLTAKLKTGDV 449

Query: 620 VEIITYNVSFS 630
           VEIIT + SF 
Sbjct: 450 VEIITNSNSFG 460


>gi|450123076|ref|ZP_21867029.1| putative stringent response protein [Streptococcus mutans ST6]
 gi|449227187|gb|EMC26626.1| putative stringent response protein [Streptococcus mutans ST6]
          Length = 740

 Score =  336 bits (861), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 189/491 (38%), Positives = 289/491 (58%), Gaps = 49/491 (9%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++  ++  V++AL  A E H GQ R+SGEP+IIHP++VA IL +L LD  +++ G LHD
Sbjct: 19  YMNKADIAFVQKALDYATECHSGQFRKSGEPYIIHPIQVAGILADLHLDAITVSCGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            +EDT   T + +E +FG+ V+ IV+G   V+KLGK++ K+    +    A++ R+M +A
Sbjct: 79  VIEDTEA-TLDHLEAKFGSDVKNIVDG---VTKLGKVEYKSHEEQL----AENHRKMLMA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M++++RVI+VKLADRLHNMRTL H+   KQ  I+ ET++++APLA  LG+ +IK ELE+L
Sbjct: 131 MSKDIRVILVKLADRLHNMRTLRHLRKDKQERISRETMEIYAPLAHRLGISRIKWELEDL 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           +F Y N  ++ K    ++ L  E  +E E     ++ KI+   + +   +  EI    K 
Sbjct: 191 AFRYLNEVEFYK----ISHLMNEKRREREALVDDIVDKIK--AYTEEQGLYGEIYGRPKH 244

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIY+ +   +   +++  +  +R I+              Q   Y +LG +H +W P+
Sbjct: 245 IYSIYRKMRDKKKRFDQIYDLIAIRCIL------------DTQSDVYAMLGYIHELWRPM 292

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK NGYQS+HTT    +Y     +EVQIRT EM  +AE G+AAH++ +  
Sbjct: 293 PGRFKDYIANPKANGYQSIHTT----VYGPKGPIEVQIRTHEMHQVAEYGVAAHWAYKKG 348

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
           + G V                 N+   AL ++W+  + E Q+   GN    +FVD++  D
Sbjct: 349 IKGKV-----------------NSQESALGMNWIKELVELQDASNGNAV--DFVDSVKED 389

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           +   R++VFTP G ++ LPK +  +D+AY IHT++G K   AKVNG +V  T  L   +V
Sbjct: 390 IFAERIYVFTPNGAVQELPKDSGPIDFAYAIHTQVGEKATGAKVNGRMVPLTAKLKTGDV 449

Query: 620 VEIITYNVSFS 630
           VEIIT + SF 
Sbjct: 450 VEIITNSNSFG 460


>gi|420198789|ref|ZP_14704475.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM031]
 gi|394272970|gb|EJE17413.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM031]
          Length = 729

 Score =  336 bits (861), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 192/491 (39%), Positives = 292/491 (59%), Gaps = 49/491 (9%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           SYLS +E E V ++  +A+EAH GQ R++G P+I+HP++VA IL E+ LD  +I AG LH
Sbjct: 18  SYLSTSEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPTIVAGFLH 77

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D +EDT+  TFE +++ F   + RIV+G TK+ K+ K + K E       +A++ R++F+
Sbjct: 78  DVIEDTSY-TFEDVKDMFNEEIARIVDGVTKLKKV-KYRSKEEQ------QAENHRKLFI 129

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           A+ ++VRVI+VKLADRLHNMRTL  MP  KQ  I+ ETL+++APLA  LG+  IK ELE+
Sbjct: 130 AIAKDVRVILVKLADRLHNMRTLKAMPREKQVRISKETLEIYAPLAHRLGINTIKWELED 189

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
            +  Y ++  Y     R+ +L K+   E E      + KI+++  +  M++  EI    K
Sbjct: 190 TALRYIDSVQYF----RIVNLMKKKRSERESYITNAINKIKNE--MTKMSLSGEINGRPK 243

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIY+ ++K +   +++  +  +RII+            +    CY  LGLVH +W P
Sbjct: 244 HIYSIYRKMIKQKKQFDQIFDLLAIRIIV------------NSINDCYATLGLVHTLWKP 291

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PK N YQSLHTT++     +   LE+QIRT EM  IAE G+AAH++ + 
Sbjct: 292 MPGRFKDYIAMPKQNMYQSLHTTVVG---PNGDPLEIQIRTHEMHEIAEHGVAAHWAYK- 347

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                            GKTV     +   +++WL   +E  E    +  ++EF++++  
Sbjct: 348 ----------------EGKTVNQKTQDFQNKLNWL---KELAETDHTSADAQEFMESLKY 388

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           DL   +V+ FTP  ++  LP GA  +D+AY IH+E+GNKM+ AKVNG +V   +VL   +
Sbjct: 389 DLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPIDYVLQTGD 448

Query: 619 VVEIITYNVSF 629
           ++EI T   S+
Sbjct: 449 IIEIRTSKHSY 459


>gi|417007457|ref|ZP_11945369.1| ppGpp synthetase [Lactobacillus helveticus MTCC 5463]
 gi|328467645|gb|EGF38700.1| ppGpp synthetase [Lactobacillus helveticus MTCC 5463]
          Length = 746

 Score =  336 bits (861), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 195/485 (40%), Positives = 283/485 (58%), Gaps = 49/485 (10%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++ +++  V +A   A +AH GQKR SG+P+IIHP +VA  L  L LD ++I AG LHD
Sbjct: 19  YMNDDQVAFVEKAYEFANKAHAGQKRASGQPYIIHPTQVAGTLATLGLDPDTIVAGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
           TVEDT  VT + ++E+FG  V  IV+G TK++K        E  S Q+  A++ R+M +A
Sbjct: 79  TVEDT-PVTNDELKEKFGEDVAFIVDGVTKLNKY-------EYKSHQEFLAENHRKMLIA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M +++RVI+VKLADRLHNM TL H+ P KQ  I++ET+ ++APLA  LG+  IK ELE++
Sbjct: 131 MAKDLRVIMVKLADRLHNMHTLQHLRPDKQRWISSETMDIYAPLADRLGIGTIKWELEDM 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           SF Y N E Y ++   +     + EK + +  K L K       LD + +K EI    K 
Sbjct: 191 SFHYLNPEAYYRIVNLMDVKRSQREKYIADTIKTLKKT------LDELGIKYEIYGRPKH 244

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIYK ++      +E+  +  +R+I+K              + CY VLG VH  W P+
Sbjct: 245 IYSIYKKMVNKHKDFDEIYDLLAVRVIVK------------NVRDCYAVLGAVHTEWKPM 292

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK NGYQSLHTT+I         LE+QIRTE+M  +AE G+AAH++ +  
Sbjct: 293 PGRFKDYIAMPKVNGYQSLHTTIIG---PGGRPLEIQIRTEQMHEVAEYGVAAHWAYK-- 347

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
                          RG    +  ++   ++  +  I E ++E      + EF+ ++  D
Sbjct: 348 ---------------RGNFTGVQESSSGEKLDMVREILELKDE---TKDAGEFMKSVKSD 389

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           +   RV+VFTP+GE+  LPKG+  +D+AY IHT++GN  V AKVN  LV   + L N +V
Sbjct: 390 IFSDRVYVFTPKGEVYELPKGSVTLDFAYAIHTQVGNHAVGAKVNNKLVPLDYKLRNGDV 449

Query: 620 VEIIT 624
           +EI+T
Sbjct: 450 IEIMT 454


>gi|225386906|ref|ZP_03756670.1| hypothetical protein CLOSTASPAR_00654 [Clostridium asparagiforme
           DSM 15981]
 gi|225046918|gb|EEG57164.1| hypothetical protein CLOSTASPAR_00654 [Clostridium asparagiforme
           DSM 15981]
          Length = 762

 Score =  336 bits (861), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 200/509 (39%), Positives = 299/509 (58%), Gaps = 65/509 (12%)

Query: 126 SPERLWEDLRPTISYLSP-NELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
           SPE L++DL  TI    P +++ ++ +A  +A EAH  QKR+SGEP+IIHP+ VA IL +
Sbjct: 22  SPEELYQDLIATIRKYHPSDDITMIEKAYRVAKEAHREQKRKSGEPYIIHPLCVAIILAD 81

Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
           LE+D E+I AGLLHD VEDT  ++ + + ++FG  V  +V+G TK+++L   K K E   
Sbjct: 82  LEMDKETIEAGLLHDVVEDT-AMSLDELAKQFGTEVSFLVDGVTKLTQLSWDKDKVE--- 137

Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
              ++AD+LR+MFLAM +++RVII+KLADRLHNMRT  +  P KQ   A ET++++AP+A
Sbjct: 138 ---IQADNLRKMFLAMAKDIRVIIIKLADRLHNMRTGQYWKPEKQKEKARETMEIYAPIA 194

Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDD--Q 362
             LG+ +IK EL++LS  Y   E Y  +  +V+ L K       +A +  +++I D+  Q
Sbjct: 195 DRLGISKIKIELDDLSLKYLKPEVYYDLVEKVS-LRK-------DAREAFVQEIVDEVKQ 246

Query: 363 FLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQ 422
            +    ++  I    K  +SIYK ++    +++++  +  +RI+++              
Sbjct: 247 HMKDAGIEAAIGGRVKHFFSIYKKMVNQNKTLDQIYDLFAVRIMVE------------TV 294

Query: 423 QICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQI 477
           + CY  LG++H ++ PIP   KDYIA PK N YQSLHTTLI     PF        E+QI
Sbjct: 295 KDCYAALGVIHEMYKPIPGRFKDYIAMPKQNMYQSLHTTLIGSNGQPF--------EIQI 346

Query: 478 RTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIR 537
           RT EM   AE GIAAH+  +   +G V  +                     ++SWL  I 
Sbjct: 347 RTYEMHRTAEYGIAAHWKYKESGSGQVAASSEEA-----------------KLSWLRQIL 389

Query: 538 EWQEEFVGNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIG 595
           EWQ +      S+EF+  +    DL    V+ FTP G++K L  G+T +D+AY IH+ +G
Sbjct: 390 EWQRD---TDDSKEFLSMVKGDLDLFSDSVYCFTPSGDVKTLTSGSTPIDFAYAIHSAVG 446

Query: 596 NKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
           NKMV A+VNG LV+  +V+ N + +EIIT
Sbjct: 447 NKMVGARVNGKLVNIDYVIQNGDQIEIIT 475


>gi|257870870|ref|ZP_05650523.1| RelA/SpoT protein [Enterococcus gallinarum EG2]
 gi|357051393|ref|ZP_09112586.1| GTP pyrophosphokinase [Enterococcus saccharolyticus 30_1]
 gi|257805034|gb|EEV33856.1| RelA/SpoT protein [Enterococcus gallinarum EG2]
 gi|355379902|gb|EHG27051.1| GTP pyrophosphokinase [Enterococcus saccharolyticus 30_1]
          Length = 736

 Score =  335 bits (860), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 192/490 (39%), Positives = 286/490 (58%), Gaps = 49/490 (10%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y+S   +  V++AL  A EAH  Q R+SGEP+IIHP++VA IL EL++D  ++A G LHD
Sbjct: 19  YMSEEHVAFVQKALDYATEAHKDQFRKSGEPYIIHPIQVAGILAELQMDPHTVATGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            VEDT V T   ++E FGA V  +V+G   V+KLGK+K K+    +    A++ R+M +A
Sbjct: 79  VVEDTEV-TLADLKEVFGADVAMLVDG---VTKLGKIKYKSHEEQL----AENHRKMLIA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M +++RVI+VKLADRLHNMRTL H+   KQ  IA ET++++APLA  LG+ +IK ELE++
Sbjct: 131 MAQDLRVIMVKLADRLHNMRTLKHLREDKQRRIAQETMEIYAPLAHRLGISRIKWELEDI 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           S  Y N + Y ++   +    +E E  + E  + +    E+   LD+     EI    K 
Sbjct: 191 SLRYLNPQQYYRIVHLMQTKREEREAYVSETVEQIRLATEE---LDIF---AEIYGRPKH 244

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIY+ +   +   NE+  +  +R+I+               + CY VLG +H  W P+
Sbjct: 245 IYSIYRKMKDQKKQFNEIYDLLAIRVIV------------DSIKDCYAVLGTIHTKWKPM 292

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK N YQSLHTT+I         +E+QIRT EM  IAE G+AAH++ +  
Sbjct: 293 PGRFKDYIAMPKANMYQSLHTTVIG---PKGNPVEIQIRTHEMHEIAEFGVAAHWAYK-- 347

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
                           G+T  +    +  ++ W   I E Q+E   +  + EF++ +  D
Sbjct: 348 ---------------EGRTEKVKADKMTQQVGWFREILELQDE---SYDASEFMEGVKGD 389

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           +   +V+VFTP+G++  LP+G++ +D+AY IHT+IGNK   AKVNG +V   + L N ++
Sbjct: 390 IFSDKVYVFTPKGDVTELPQGSSPLDFAYSIHTDIGNKTTGAKVNGKMVQLDYKLKNGDI 449

Query: 620 VEIITYNVSF 629
           +EI+T   SF
Sbjct: 450 IEILTSPNSF 459


>gi|347753839|ref|YP_004861403.1| (p)ppGpp synthetase RelA/SpoT family [Candidatus
           Chloracidobacterium thermophilum B]
 gi|347586357|gb|AEP10887.1| (p)ppGpp synthetase, RelA/SpoT family [Candidatus
           Chloracidobacterium thermophilum B]
          Length = 731

 Score =  335 bits (860), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 195/503 (38%), Positives = 293/503 (58%), Gaps = 68/503 (13%)

Query: 131 WEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDW 189
           +ED+   +    PN +L+L+RRA +L+ + H GQ R+SGEP+++HP+ VA IL E+ LD 
Sbjct: 4   FEDIAEKVERYHPNADLDLLRRAYLLSAQMHKGQVRKSGEPYLMHPLAVAYILAEMRLDV 63

Query: 190 ESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVK 249
             +  GLLHD VEDT+V T E +E++FG  +  +V+G TK+S +       E  S +D +
Sbjct: 64  ICVTTGLLHDVVEDTHV-TLEELEQQFGPEIAHLVDGLTKISNI-------EYTSREDRQ 115

Query: 250 ADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGM 309
           A+ +R+M LAM +++RV++VKLADRLHNMRTL ++PP K+++ A ETL ++AP+A  LGM
Sbjct: 116 AETVRKMLLAMVDDIRVVLVKLADRLHNMRTLDYLPPEKRAAKAQETLDIYAPIAHRLGM 175

Query: 310 YQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTV 369
            +I+ ELE+LSF Y   +DY  +K  +       E +L      L +K+ +        V
Sbjct: 176 GKIRGELEDLSFQYLYPDDYQHLKSILDQRRPALEADLAHVRATLQEKLPE------HNV 229

Query: 370 K-TEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI--CY 426
           K  EI+   K  YS+Y+ + +   SI++V  +  +R+I               Q I  CY
Sbjct: 230 KVVEIQGRIKRLYSLYRKLKERAISIDQVYDLMAVRVIT--------------QDIADCY 275

Query: 427 HVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEE 481
             +G+VH IW PIP   KD+I  P+ N YQSLHT+++     PF        EVQIRT E
Sbjct: 276 AAVGVVHNIWKPIPGRFKDWIGIPRNNLYQSLHTSVVGDIGHPF--------EVQIRTAE 327

Query: 482 MDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQE 541
           M  IAE GIAAH+                 R   G++    +       +WL  + EWQ+
Sbjct: 328 MHKIAEEGIAAHW-----------------RYKEGRSAVKEDPET---YAWLKRLVEWQQ 367

Query: 542 EFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAA 601
           E      SREF+D +  +L  + V+ +TP+G++  LP+G+  +D+AY IH+++G   V A
Sbjct: 368 EV---SDSREFLDELKINLYPNEVYAYTPKGKVLELPRGSCPIDFAYAIHSDVGQHCVGA 424

Query: 602 KVNGNLVSPTHVLANAEVVEIIT 624
           KVNGN+V  ++ L N +VVEI+T
Sbjct: 425 KVNGNIVKLSYELKNGDVVEILT 447


>gi|332522744|ref|ZP_08398996.1| GTP diphosphokinase [Streptococcus porcinus str. Jelinkova 176]
 gi|332314008|gb|EGJ26993.1| GTP diphosphokinase [Streptococcus porcinus str. Jelinkova 176]
          Length = 739

 Score =  335 bits (860), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 187/493 (37%), Positives = 295/493 (59%), Gaps = 51/493 (10%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           +Y++ N++  V++AL  A  AH  Q R+SGEP+IIHP++VA IL +L+LD  ++A G LH
Sbjct: 18  AYMNKNDVAFVKKALDYATAAHYYQARKSGEPYIIHPIQVAGILADLQLDAVTVACGFLH 77

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT++ T + IE +FG+ VR IV+G   V+KLGK++ K+    +    A++ R+M +
Sbjct: 78  DVVEDTDI-TLDNIEMDFGSDVRDIVDG---VTKLGKVEYKSHEEQL----AENHRKMLM 129

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM++++RVI+VKLADRLHNMRTL H+   KQ  I+ ET++++APLA  LG+ +IK ELE+
Sbjct: 130 AMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELED 189

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEE-ANKILMKKIEDDQFLDLMTVKTEIRSVC 377
           L+F Y N  ++ K+   + +  +E E  ++E  +KI+    E   + D+      I    
Sbjct: 190 LAFRYLNESEFYKISHMMREKRREREALVDEIVDKIITYTREQGLYGDVYGRPKHI---- 245

Query: 378 KEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWT 437
              YSIY+ +   +   +++  +  +R +++             Q   Y ++G +H +W 
Sbjct: 246 ---YSIYRKMRDKKKRFDQIFDLIAIRCVME------------TQSDVYAMVGYIHELWR 290

Query: 438 PIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGR 497
           P+P   KDYIA PK NGYQS+HTT    +Y     +E+QIRT++M  +AE G+AAH++ +
Sbjct: 291 PMPGRFKDYIAAPKANGYQSIHTT----VYGPKGPIEIQIRTKDMHQVAEYGVAAHWAYK 346

Query: 498 VFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTIT 557
             V G V        S   + V +N         W+N + E Q+    N  +++FVD++ 
Sbjct: 347 KGVKGKV--------SQSDQKVGMN---------WINELVELQD--ASNGDAKDFVDSVK 387

Query: 558 RDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANA 617
            D+   R++VFTP G ++ LPK +  +D+AY IHT++G K   A+VNG +V  T  L   
Sbjct: 388 EDIFSERIYVFTPNGAVQELPKESGPIDFAYAIHTQVGEKATGARVNGKMVPLTAKLKTG 447

Query: 618 EVVEIITYNVSFS 630
           +VVEI+T   SF 
Sbjct: 448 DVVEIVTNPNSFG 460


>gi|325262048|ref|ZP_08128786.1| GTP diphosphokinase [Clostridium sp. D5]
 gi|324033502|gb|EGB94779.1| GTP diphosphokinase [Clostridium sp. D5]
          Length = 767

 Score =  335 bits (860), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 202/507 (39%), Positives = 294/507 (57%), Gaps = 61/507 (12%)

Query: 126 SPERLWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
            PE+L++ L   +    P+ ++ ++ +A   A  AH  Q R+SGEP+IIHP+ V  IL +
Sbjct: 30  DPEQLYQALIARVRKYHPSADITMIEKAYTTAKNAHKDQARKSGEPYIIHPLWVGIILAD 89

Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
           LE+D E+I AG+LHD VEDT++ T E +  EF   V  +V+G   V+KLG+L    +   
Sbjct: 90  LEMDKETIVAGMLHDAVEDTDM-TLEDVAREFSEEVALLVDG---VTKLGQLSYSQDKLE 145

Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
           VQ   A++LR+MFLAM +++RVII+KLADRLHNMRTL  M P KQ   A ET+ ++AP+A
Sbjct: 146 VQ---AENLRKMFLAMAKDIRVIIIKLADRLHNMRTLEFMTPAKQKEKARETMDIYAPIA 202

Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
             LG+ +IK+EL++LS  Y+  E Y  +   V DL  E + E EE  + ++ ++     +
Sbjct: 203 HRLGISKIKTELDDLSLKYSQPEVYNNL---VKDL-NERKTEREEFVQQIVAEVS--THM 256

Query: 365 DLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
               +  ++    K  +SIYK ++    ++++V  +  +RII+               + 
Sbjct: 257 KNSHIHAKVYGRVKHFFSIYKKMVNQNKTLDQVYDLFAVRIIV------------DSVKD 304

Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRT 479
           CY  LG++H ++TPIP   KDYIA PK N YQSLHTTL+     PF        E+QIRT
Sbjct: 305 CYAALGVIHEMYTPIPGRFKDYIAMPKANMYQSLHTTLMGPSGQPF--------EIQIRT 356

Query: 480 EEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREW 539
           EEM   AE GIAAH+  +               S  GK+     A    ++SWL  I EW
Sbjct: 357 EEMHKTAEFGIAAHWKYK--------------ESSAGKSA---KAQEEEKLSWLRQILEW 399

Query: 540 QEEFVGNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNK 597
           Q +   N   REF+  +    DL    V+ FTP G++KNLP G+T VD+AY IH+ +GNK
Sbjct: 400 QRDMSDN---REFLSLLKGDLDLFAEDVYCFTPNGDVKNLPNGSTPVDFAYAIHSAVGNK 456

Query: 598 MVAAKVNGNLVSPTHVLANAEVVEIIT 624
           MV A+VNG LV+  + + N + +EI+T
Sbjct: 457 MVGARVNGKLVNIDYKIQNGDRIEILT 483


>gi|417933627|ref|ZP_12576947.1| RelA/SpoT family protein [Streptococcus mitis bv. 2 str. F0392]
 gi|340770197|gb|EGR92712.1| RelA/SpoT family protein [Streptococcus mitis bv. 2 str. F0392]
          Length = 738

 Score =  335 bits (860), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 192/494 (38%), Positives = 294/494 (59%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YLS  ++  V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD  ++A G 
Sbjct: 16  TQKYLSKEDVAFVHKALVYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT+  T + +E+EFG  VR IV+G   V+KLGK++ K    S+++  A++ R+M
Sbjct: 76  LHDVVEDTDT-TLDDLEQEFGHDVRIIVDG---VTKLGKVEYK----SIEEQLAENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM+E++RVI+VKL+DRLHNMRTL+H+   KQ  I+ ET++++APLA  LG+  +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLNHLRKDKQERISRETMEIYAPLAHRLGISSVKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y N  ++ K+   + +  +E E  ++E    ++ K+E  ++     +K +I   
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLE--EYTSERNLKGKIYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSIY+ +   +    E+  +  +R I+              Q   Y +LG VH +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHELW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA  K NGYQS+HTT    +Y     +E QIRT+EM  +AE G+AAH++ 
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  + G V                 N+   A+ ++W+  + E Q++      ++EFVD++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMIELQDQ---ADDAKEFVDSV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             + L   ++VFTP G +++LPK +  +D+AY IHT++G K   AKVNG +V  T  L  
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445

Query: 617 AEVVEIITYNVSFS 630
            + VEIIT   SF 
Sbjct: 446 GDQVEIITNPNSFG 459


>gi|424779945|ref|ZP_18206831.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Catellicoccus
           marimammalium M35/04/3]
 gi|422843484|gb|EKU27921.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Catellicoccus
           marimammalium M35/04/3]
          Length = 724

 Score =  335 bits (860), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 195/486 (40%), Positives = 288/486 (59%), Gaps = 49/486 (10%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           SY++  +   V++AL  A +AH  Q R+SGEP+IIHP++VA  L E+  D  ++AAG LH
Sbjct: 18  SYMTKEDAAFVQKALDFATKAHAPQVRKSGEPYIIHPIQVANTLVEIHTDPCTVAAGFLH 77

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT V T E I EEF   V  IV+G   V+KLGK+K K+    +    A++ ++M L
Sbjct: 78  DVVEDTPV-TLEEIAEEFNDDVAAIVDG---VTKLGKIKYKSHEEQL----AENHQKMLL 129

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM +++RVI+VKLADRLHNMRTL ++ P KQ  IA ETL+++APLA  LGM +IK ELE+
Sbjct: 130 AMAQDLRVILVKLADRLHNMRTLKYLRPDKQRRIAKETLEIYAPLANRLGMSRIKWELED 189

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
            S  Y + + Y ++   +A+  +E EK + E  + + K++E       + +  +I    K
Sbjct: 190 RSLRYLDPQQYYRIVHLMAEKREEREKYVSEMIREVKKEVEQ------LHIHADINGRPK 243

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIY+ +   + S  E+  +  +RII+               + CY +LG VH  WTP
Sbjct: 244 HIYSIYRKMHDQKKSFEEIYDLTAIRIIV------------DNIKECYAILGAVHTRWTP 291

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P+  KDYIA PK N YQSLHTT+I         +E+QIRT EM  IAE G+AAH++ + 
Sbjct: 292 MPKRFKDYIAMPKANMYQSLHTTVIG---PGGRPIEIQIRTHEMHKIAEFGVAAHWAYK- 347

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                           +GK   +   N   ++ W   I E Q++   +  + EF++++  
Sbjct: 348 ----------------QGKKDKVKGDNTDQQLDWFREIIELQKD---SNDASEFMESVKG 388

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           D+   +V+VFTP+GE+  LP G+  +D+AY IHTEIGN  + AKVNG +V  ++ L N +
Sbjct: 389 DIFKDKVYVFTPKGEVCELPCGSGPLDFAYYIHTEIGNHAIGAKVNGKMVPLSYKLKNGD 448

Query: 619 VVEIIT 624
           ++EIIT
Sbjct: 449 LLEIIT 454


>gi|417922710|ref|ZP_12566197.1| RelA/SpoT family protein [Streptococcus cristatus ATCC 51100]
 gi|342832237|gb|EGU66537.1| RelA/SpoT family protein [Streptococcus cristatus ATCC 51100]
          Length = 739

 Score =  335 bits (860), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 192/494 (38%), Positives = 290/494 (58%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YL+  ++  V++AL+ A E H GQ R+SGEP+I+HP++VA IL +L+LD  S+A G 
Sbjct: 16  TKKYLAAEDVAFVQKALIYAMECHSGQTRKSGEPYIVHPIQVAGILAKLKLDAVSVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT   T + +E EFG  VR IV+G   V+KLGK+K K+    +    A++ R+M
Sbjct: 76  LHDVVEDT-AATLDDLEREFGHDVRVIVDG---VTKLGKVKYKSHEEQL----AENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM+E++RVI+VKLADRLHNMRTL+H+ P KQ  I+ ET++++APLA  LG+  +K EL
Sbjct: 128 LMAMSEDLRVILVKLADRLHNMRTLNHLRPDKQERISQETMEIYAPLAHRLGISSVKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y N  ++ K+   + +  +E E  +EE    ++ KIE   +     +  +I   
Sbjct: 188 EDLSFRYLNPTEFYKISHMMKEKRREREALVEE----VVHKIE--TYAGERNLHGKIYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSIY+ +   +   +E+  +  +R I+            S     Y +LG +H +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFDEIYDLIAIRCIL------------STHSDVYAMLGYIHELW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA  K NGYQS+HTT    +Y     +E QIRT+EM  +AE G+AAH++ 
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  + G V     +G+              A+ ++W+  + E Q +   +  ++EFVD++
Sbjct: 346 KKGIKGQV-----DGKES------------AIGMNWIKELMELQNQ---SGDAKEFVDSV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
               L   ++VFTP G +++LPK +  +D+AY IHT++G K   AKVNG +V     L  
Sbjct: 386 KESYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLNTKLKT 445

Query: 617 AEVVEIITYNVSFS 630
            + VEIIT   SF 
Sbjct: 446 GDQVEIITNANSFG 459


>gi|331090444|ref|ZP_08339325.1| hypothetical protein HMPREF1025_02908 [Lachnospiraceae bacterium
           3_1_46FAA]
 gi|336440256|ref|ZP_08619849.1| hypothetical protein HMPREF0990_02243 [Lachnospiraceae bacterium
           1_1_57FAA]
 gi|330401191|gb|EGG80784.1| hypothetical protein HMPREF1025_02908 [Lachnospiraceae bacterium
           3_1_46FAA]
 gi|336013722|gb|EGN43596.1| hypothetical protein HMPREF0990_02243 [Lachnospiraceae bacterium
           1_1_57FAA]
          Length = 767

 Score =  335 bits (860), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 200/507 (39%), Positives = 295/507 (58%), Gaps = 61/507 (12%)

Query: 126 SPERLWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
            PE+L+  L   +    P+ ++ ++ +A  +  EAH  Q R+SGEP+IIHP+ V  IL +
Sbjct: 30  DPEQLYHVLIERVRKYHPSADITMIEKAYRIGKEAHRDQVRKSGEPYIIHPLWVGIILAD 89

Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
           LE+D E+I AG+LHD VEDT++ T + +  EFG  V  +V+G   V+KLG+L   N +  
Sbjct: 90  LEMDKETIVAGMLHDAVEDTDM-TLDDVAGEFGEEVALLVDG---VTKLGQL---NYSQD 142

Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
             +V+A++LR+MFLAM +++RVII+KLADRLHNMRTL  M P KQ   A ET+ ++AP+A
Sbjct: 143 KLEVQAENLRKMFLAMAKDIRVIIIKLADRLHNMRTLEFMTPTKQQEKARETMDIYAPIA 202

Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
           + LG+ +IK+EL++LS  Y   E Y  + R   DL +   +  E   +I+    E  + +
Sbjct: 203 QRLGISKIKTELDDLSLKYWKPEVYYNLVR---DLNRRKTEREEFVQQIVA---EVSKHM 256

Query: 365 DLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
               ++ ++    K  +SIYK ++    ++++V  +  +RII+               + 
Sbjct: 257 KNAHIEAKVYGRVKHFFSIYKKMVNQNKTLDQVYDLFAVRIIV------------DSVKD 304

Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRT 479
           CY  LG++H ++TPIP   KDYIA PKPN YQSLHTTL+     PF        E+QIRT
Sbjct: 305 CYAALGVIHEMYTPIPGRFKDYIAMPKPNMYQSLHTTLMGPSGQPF--------EIQIRT 356

Query: 480 EEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREW 539
           EEM   AE GIAAH+  +            + +S   +   LN         WL  I EW
Sbjct: 357 EEMHKTAEYGIAAHWKYK--------EGGDSAKSMESQEAKLN---------WLRQILEW 399

Query: 540 QEEFVGNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNK 597
           Q +   N   REF+  +    DL    V+ FTP G++KNLP G+T VD+AY IH+ +GNK
Sbjct: 400 QRDMSDN---REFLSLLKGDLDLFAEDVYCFTPNGDVKNLPNGSTPVDFAYAIHSAVGNK 456

Query: 598 MVAAKVNGNLVSPTHVLANAEVVEIIT 624
           MV A+VNG LV+  + + N + +EI+T
Sbjct: 457 MVGARVNGKLVNIDYKIQNGDRIEILT 483


>gi|317502040|ref|ZP_07960222.1| GTP diphosphokinase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|316896514|gb|EFV18603.1| GTP diphosphokinase [Lachnospiraceae bacterium 8_1_57FAA]
          Length = 774

 Score =  335 bits (860), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 200/507 (39%), Positives = 295/507 (58%), Gaps = 61/507 (12%)

Query: 126 SPERLWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
            PE+L+  L   +    P+ ++ ++ +A  +  EAH  Q R+SGEP+IIHP+ V  IL +
Sbjct: 37  DPEQLYHVLIERVRKYHPSADITMIEKAYRIGKEAHRDQVRKSGEPYIIHPLWVGIILAD 96

Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
           LE+D E+I AG+LHD VEDT++ T + +  EFG  V  +V+G   V+KLG+L   N +  
Sbjct: 97  LEMDKETIVAGMLHDAVEDTDM-TLDDVAGEFGEEVALLVDG---VTKLGQL---NYSQD 149

Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
             +V+A++LR+MFLAM +++RVII+KLADRLHNMRTL  M P KQ   A ET+ ++AP+A
Sbjct: 150 KLEVQAENLRKMFLAMAKDIRVIIIKLADRLHNMRTLEFMTPTKQQEKARETMDIYAPIA 209

Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
           + LG+ +IK+EL++LS  Y   E Y  + R   DL +   +  E   +I+    E  + +
Sbjct: 210 QRLGISKIKTELDDLSLKYWKPEVYYNLVR---DLNRRKTEREEFVQQIVA---EVSKHM 263

Query: 365 DLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
               ++ ++    K  +SIYK ++    ++++V  +  +RII+               + 
Sbjct: 264 KNAHIEAKVYGRVKHFFSIYKKMVNQNKTLDQVYDLFAVRIIV------------DSVKD 311

Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRT 479
           CY  LG++H ++TPIP   KDYIA PKPN YQSLHTTL+     PF        E+QIRT
Sbjct: 312 CYAALGVIHEMYTPIPGRFKDYIAMPKPNMYQSLHTTLMGPSGQPF--------EIQIRT 363

Query: 480 EEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREW 539
           EEM   AE GIAAH+  +            + +S   +   LN         WL  I EW
Sbjct: 364 EEMHKTAEYGIAAHWKYK--------EGGDSAKSMESQEAKLN---------WLRQILEW 406

Query: 540 QEEFVGNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNK 597
           Q +   N   REF+  +    DL    V+ FTP G++KNLP G+T VD+AY IH+ +GNK
Sbjct: 407 QRDMSDN---REFLSLLKGDLDLFAEDVYCFTPNGDVKNLPNGSTPVDFAYAIHSAVGNK 463

Query: 598 MVAAKVNGNLVSPTHVLANAEVVEIIT 624
           MV A+VNG LV+  + + N + +EI+T
Sbjct: 464 MVGARVNGKLVNIDYKIQNGDRIEILT 490


>gi|227879058|ref|ZP_03996948.1| GTP diphosphokinase [Lactobacillus crispatus JV-V01]
 gi|256843052|ref|ZP_05548540.1| ppGpp synthetase [Lactobacillus crispatus 125-2-CHN]
 gi|256850296|ref|ZP_05555725.1| ppGpp synthetase [Lactobacillus crispatus MV-1A-US]
 gi|262046025|ref|ZP_06018989.1| ppGpp synthetase [Lactobacillus crispatus MV-3A-US]
 gi|293381310|ref|ZP_06627313.1| GTP diphosphokinase [Lactobacillus crispatus 214-1]
 gi|312977236|ref|ZP_07788984.1| GTP diphosphokinase [Lactobacillus crispatus CTV-05]
 gi|423318875|ref|ZP_17296752.1| RelA/SpoT family protein [Lactobacillus crispatus FB049-03]
 gi|227861353|gb|EEJ68982.1| GTP diphosphokinase [Lactobacillus crispatus JV-V01]
 gi|256614472|gb|EEU19673.1| ppGpp synthetase [Lactobacillus crispatus 125-2-CHN]
 gi|256712933|gb|EEU27925.1| ppGpp synthetase [Lactobacillus crispatus MV-1A-US]
 gi|260573984|gb|EEX30540.1| ppGpp synthetase [Lactobacillus crispatus MV-3A-US]
 gi|290922126|gb|EFD99125.1| GTP diphosphokinase [Lactobacillus crispatus 214-1]
 gi|310895667|gb|EFQ44733.1| GTP diphosphokinase [Lactobacillus crispatus CTV-05]
 gi|405591738|gb|EKB65207.1| RelA/SpoT family protein [Lactobacillus crispatus FB049-03]
          Length = 746

 Score =  335 bits (860), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 194/485 (40%), Positives = 283/485 (58%), Gaps = 49/485 (10%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++ +++  V +A   A +AH GQKR SG+P+IIHP +VA  L  L LD +++AAG LHD
Sbjct: 19  YMNDDQVAFVEKAYEFANKAHAGQKRASGQPYIIHPTQVAGTLATLGLDPDTVAAGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
           TVEDT  VT + ++E+FG  V  IV+G TK++K        E  S Q+  A++ R+M +A
Sbjct: 79  TVEDT-PVTNDELKEKFGEDVAFIVDGVTKLNKY-------EYKSHQEFLAENHRKMLIA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M +++RVI+VKLADRLHNM TL H+ P KQ  IA+ET+ ++APLA  LG+  IK ELE++
Sbjct: 131 MAQDLRVIMVKLADRLHNMHTLQHLRPDKQRRIASETMDIYAPLADRLGIGTIKWELEDM 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           SF Y N E Y ++   +     + EK + +  K L K       L+ + +K EI    K 
Sbjct: 191 SFHYLNPEAYYRIVNLMDVKRSQREKYIADTIKTLKKT------LNELGIKYEIYGRPKH 244

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIYK ++      +E+  +  +R+I+K              + CY VLG VH  W P+
Sbjct: 245 IYSIYKKMVNKHKDFDEIYDLLAVRVIVK------------NVRDCYAVLGAVHTEWKPM 292

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK NGYQSLHTT+I         LE+QIRTE+M  +AE G+AAH++ +  
Sbjct: 293 PGRFKDYIAMPKVNGYQSLHTTIIG---PGGRPLEIQIRTEQMHKVAEYGVAAHWAYK-- 347

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
                          RG    +  +    ++  +  I E ++E      + EF+ ++  D
Sbjct: 348 ---------------RGNFTGVEQSTSGEKLDMVREILELKDE---TKDAGEFMKSVKSD 389

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           +   RV+VFTP+GE+  LPKG+  +D+AY IHT++G+  V AKVN  LV   + L N +V
Sbjct: 390 IFSDRVYVFTPKGEVYELPKGSVTLDFAYAIHTQVGSHAVGAKVNNKLVPLDYKLRNGDV 449

Query: 620 VEIIT 624
           +EI+T
Sbjct: 450 IEIMT 454


>gi|450006240|ref|ZP_21827118.1| putative stringent response protein [Streptococcus mutans NMT4863]
 gi|449187803|gb|EMB89559.1| putative stringent response protein [Streptococcus mutans NMT4863]
          Length = 740

 Score =  335 bits (860), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 188/491 (38%), Positives = 290/491 (59%), Gaps = 49/491 (9%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++  ++  V++AL  A E H GQ R+SGEP+IIHP++VA IL +L LD  +++ G LHD
Sbjct: 19  YMNKADIAFVQKALDYATECHSGQFRKSGEPYIIHPIQVAGILADLHLDAITVSCGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            +EDT   T + ++ +FG+ V+ IV+G   V+KLGK++ K+    +    A++ R+M +A
Sbjct: 79  VIEDTEA-TLDHLDAKFGSDVKNIVDG---VTKLGKVEYKSHEEQL----AENHRKMLMA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M++++RVI+VKLADRLHNMRTL H+   KQ  I+ ET++++APLA  LG+ +IK ELE+L
Sbjct: 131 MSKDIRVILVKLADRLHNMRTLRHLRKDKQERISRETMEIYAPLAHRLGISRIKWELEDL 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           +F Y N  ++ K    ++ L  E  +E E     ++ KI+   + +   +  EI    K 
Sbjct: 191 AFRYLNEVEFYK----ISHLMNEKRREREALVDDIVDKIK--AYTEEQGLHGEIYGRPKH 244

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIY+ +   +   +++  +  +R I+            + Q   Y +LG +H +W P+
Sbjct: 245 IYSIYRKMRDKKKRFDQIYDLIAIRCIL------------NTQSDVYAMLGYIHELWRPM 292

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK NGYQS+HTT    +Y     +EVQIRT EM  +AE G+AAH++ +  
Sbjct: 293 PGRFKDYIANPKANGYQSIHTT----VYGPKGPIEVQIRTHEMHQVAEYGVAAHWAYKKG 348

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
           + G V                 N+   AL ++W+  + E Q+   GN    +FVD++  D
Sbjct: 349 IKGKV-----------------NSQESALGMNWIKELVELQDASNGNAV--DFVDSVKED 389

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           +   R++VFTP G ++ LPK +  +D+AY IHT++G K   AKVNG +V  T  L   +V
Sbjct: 390 IFAERIYVFTPNGAVQELPKDSGPIDFAYAIHTQVGEKATGAKVNGRMVPLTAKLKTGDV 449

Query: 620 VEIITYNVSFS 630
           VEIIT + SF 
Sbjct: 450 VEIITNSNSFG 460


>gi|402310465|ref|ZP_10829429.1| putative GTP diphosphokinase [Eubacterium sp. AS15]
 gi|400368388|gb|EJP21399.1| putative GTP diphosphokinase [Eubacterium sp. AS15]
          Length = 739

 Score =  335 bits (860), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 196/498 (39%), Positives = 292/498 (58%), Gaps = 57/498 (11%)

Query: 132 EDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWE 190
           E+L   +   +P  ++ ++ +A   A   H+GQ RRSGE +IIHPVEVA IL ELELD  
Sbjct: 3   ENLIQKVKTYNPEADVSIIEKAFEYAKSKHEGQVRRSGEKYIIHPVEVANILAELELDVA 62

Query: 191 SIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKA 250
           SIAAGL+HD VEDT V T ++++  FG  + ++V+G TK+ K+   K K EN      +A
Sbjct: 63  SIAAGLMHDVVEDTEV-TSDQMKSMFGEEIAKLVDGVTKLGKIA-YKTKEEN------QA 114

Query: 251 DDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMY 310
           ++LR+MF+AM +++RV+++KLADRLHNMRTL  MPP+K    + ETL++FAP+A+ LGM+
Sbjct: 115 ENLRKMFMAMGDDIRVVLIKLADRLHNMRTLKFMPPYKAVIKSKETLEIFAPIAERLGMF 174

Query: 311 QIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEA----NKILMKKIEDDQFLDL 366
           +IK E+E+++  YT  + Y  ++R++     + E  + +      + L K+I ++ F   
Sbjct: 175 KIKWEMEDIALRYTEPDFYFDMRRQIMRRLYQRESYITDMIDFLKENLAKEIPNNHF--- 231

Query: 367 MTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICY 426
                EI    K  YSIYK +     +  E+     +R+I++ K              CY
Sbjct: 232 -----EIYGREKNLYSIYKKMKFKNKAFEEIYDFLAIRVIVQTKAE------------CY 274

Query: 427 HVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIA 486
            VLG+VH +W PIP   KDYI  PK N YQSLHTT+     E    +E+QIRTEEM   A
Sbjct: 275 WVLGIVHSMWKPIPDRNKDYIGNPKVNNYQSLHTTVFGPGGEL---VEIQIRTEEMHKTA 331

Query: 487 ERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGN 546
           E GIAAH+  +             GR      +  + + +  +++WL  + +WQ+E    
Sbjct: 332 EYGIAAHWKYK------------QGR------IDPHESEMDKKLAWLRQLMDWQKEVTD- 372

Query: 547 MTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGN 606
               E++ ++  DL   +VFVFTP+G+I  LP G+T +D AY IHT +GNK V AK+N  
Sbjct: 373 --PDEYMKSLKTDLYSHQVFVFTPKGDIIELPAGSTPIDMAYKIHTNVGNKCVGAKINNK 430

Query: 607 LVSPTHVLANAEVVEIIT 624
           +V+    L N ++VEI+T
Sbjct: 431 IVTLDTELKNGQIVEIMT 448


>gi|423321551|ref|ZP_17299422.1| RelA/SpoT family protein [Lactobacillus crispatus FB077-07]
 gi|405594489|gb|EKB67900.1| RelA/SpoT family protein [Lactobacillus crispatus FB077-07]
          Length = 746

 Score =  335 bits (860), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 194/485 (40%), Positives = 283/485 (58%), Gaps = 49/485 (10%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++ +++  V +A   A +AH GQKR SG+P+IIHP +VA  L  L LD +++AAG LHD
Sbjct: 19  YMNDDQVAFVEKAYEFANKAHAGQKRASGQPYIIHPTQVAGTLATLGLDPDTVAAGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
           TVEDT  VT + ++E+FG  V  IV+G TK++K        E  S Q+  A++ R+M +A
Sbjct: 79  TVEDT-PVTNDELKEKFGEDVAFIVDGVTKLNKY-------EYKSHQEFLAENHRKMLIA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M +++RVI+VKLADRLHNM TL H+ P KQ  IA+ET+ ++APLA  LG+  IK ELE++
Sbjct: 131 MAQDLRVIMVKLADRLHNMHTLQHLRPDKQRRIASETMDIYAPLADRLGIGTIKWELEDM 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           SF Y N E Y ++   +     + EK + +  K L K       L+ + +K EI    K 
Sbjct: 191 SFHYLNPEAYYRIVNLMDVKRSQREKYIADTIKTLKKT------LNELGIKYEIYGRPKH 244

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIYK ++      +E+  +  +R+I+K              + CY VLG VH  W P+
Sbjct: 245 IYSIYKKMVNKHKDFDEIYDLLAVRVIVK------------NVRDCYAVLGAVHTEWKPM 292

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK NGYQSLHTT+I         LE+QIRTE+M  +AE G+AAH++ +  
Sbjct: 293 PGRFKDYIAMPKVNGYQSLHTTIIG---PGGRPLEIQIRTEQMHKVAEYGVAAHWAYK-- 347

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
                          RG    +  +    ++  +  I E ++E      + EF+ ++  D
Sbjct: 348 ---------------RGNFTGVEQSTSGEKLDMVREILELKDE---TKDAGEFMKSVKSD 389

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           +   RV+VFTP+GE+  LPKG+  +D+AY IHT++G+  V AKVN  LV   + L N +V
Sbjct: 390 IFSDRVYVFTPKGEVYELPKGSVTLDFAYAIHTQVGSHAVGAKVNNKLVPLDYKLRNGDV 449

Query: 620 VEIIT 624
           +EI+T
Sbjct: 450 IEIMT 454


>gi|418036575|ref|ZP_12674991.1| GTP diphosphokinase [Lactobacillus delbrueckii subsp. bulgaricus
           CNCM I-1519]
 gi|354687625|gb|EHE87705.1| GTP diphosphokinase [Lactobacillus delbrueckii subsp. bulgaricus
           CNCM I-1519]
          Length = 753

 Score =  335 bits (860), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 199/485 (41%), Positives = 281/485 (57%), Gaps = 50/485 (10%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++ ++L  V  A   A  AH+GQ R SG+P+I+HP +VA IL  L LD +++AAG LHD
Sbjct: 19  YITADQLAFVESAYQFAARAHEGQTRASGQPYIVHPTQVAGILANLGLDPDTVAAGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
           TVEDT+V T + I+E+FGA V  IV+G TK++K        E  S ++  A++ R+M +A
Sbjct: 79  TVEDTSV-TNDDIKEKFGADVAFIVDGVTKLNKY-------EYKSHKEFLAENHRKMLIA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M +++RVI+VKLADRLHNM TL H+ P KQ  IA ETL ++APLA  LG+  IK +LE++
Sbjct: 131 MAKDLRVILVKLADRLHNMHTLEHLRPDKQRRIAAETLDIYAPLADRLGIGTIKWKLEDM 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           SF Y N E Y K+   +     E E  +++A   L         LD + +K +I    K 
Sbjct: 191 SFHYMNPEAYYKIVSMMDAKRSEREGYIKDAIDYLRGT------LDSLGIKYDISGRPKH 244

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIYK ++    + NE+  +  +R+I+         P       CY VLG VH  W P+
Sbjct: 245 IYSIYKKMVNKHKNFNEIYDLLAVRVIV---------PTVKD---CYAVLGAVHTKWKPM 292

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK NGYQSLHTT+I         LE+QIRTEEM  +AE G+AAH++    
Sbjct: 293 PGRFKDYIAMPKANGYQSLHTTIIG---PGGKPLEIQIRTEEMHKVAEYGVAAHWA---- 345

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
                 + R N +    K         AL I      RE  E    +  + EF++ +  D
Sbjct: 346 ------YKRGNFQGVDEKEGG------ALDIG-----REILELQKDSSDADEFMEAVHSD 388

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           +   +V+VFTP+GE+  LPKG+  +D+AY IHT++G+  + AKVN  LV   + L N +V
Sbjct: 389 IFADKVYVFTPKGEVYELPKGSVTLDFAYAIHTQVGDHAIGAKVNDKLVPLDYKLKNGDV 448

Query: 620 VEIIT 624
           V+I+T
Sbjct: 449 VDILT 453


>gi|329116715|ref|ZP_08245432.1| GTP diphosphokinase [Streptococcus parauberis NCFD 2020]
 gi|326907120|gb|EGE54034.1| GTP diphosphokinase [Streptococcus parauberis NCFD 2020]
          Length = 739

 Score =  335 bits (860), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 191/491 (38%), Positives = 294/491 (59%), Gaps = 49/491 (9%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++  +L LV++AL  A +AH  Q R+SGEP+IIHP++VA IL +L+LD  ++A G LHD
Sbjct: 19  YMNDKDLALVKKALGYATDAHFYQARKSGEPYIIHPIQVAGILADLQLDAVTVACGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            VEDT + T E IE+EFG  VR IV+G   V+KLGK++ K+    +    A++ R+M +A
Sbjct: 79  VVEDTEI-TLEDIEDEFGKDVRDIVDG---VTKLGKVEYKSHEEQL----AENHRKMLMA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M+ ++RVI+VKL+DRLHNMRTL H+   KQ  I+ ET++++APLA  LG+ +IK ELE+L
Sbjct: 131 MSRDIRVILVKLSDRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELEDL 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           SF Y N  ++ K+   +++  +E E  +   + I+ K I    + +   +  E+    K 
Sbjct: 191 SFRYLNEIEFYKITHLMSEKRREREALV---DNIVEKII---SYTNEQGLYGEVYGRPKH 244

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIY+ +   +   +++  +  +R I++             Q   Y ++G +H +W P+
Sbjct: 245 IYSIYRKMRDKKKRFDQIFDLIAIRCIME------------TQSDVYAMVGYIHELWRPM 292

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK NGYQS+HTT    +Y     +E+QIRT+EM  +AE G+AAH++   +
Sbjct: 293 PGRFKDYIAAPKANGYQSIHTT----VYGPKGPIEIQIRTKEMHQVAEYGVAAHWA---Y 345

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
             GL G       S   + V +N         W+N + E Q+    N  +++FVD++  +
Sbjct: 346 KKGLKGKV-----SQSDQKVGMN---------WINELVELQD--ASNGDAKDFVDSVKEE 389

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           +   R++VFTP G ++ LPK +  +D+AY IHT++G K   AKVNG +V  T  L   +V
Sbjct: 390 IFSERIYVFTPNGAVQELPKESGPIDFAYAIHTQVGEKATGAKVNGKMVPLTSKLKTGDV 449

Query: 620 VEIITYNVSFS 630
           VEI+T   SF 
Sbjct: 450 VEIVTNPNSFG 460


>gi|163782986|ref|ZP_02177981.1| (p)ppGpp 3-pyrophosphohydrolase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159881666|gb|EDP75175.1| (p)ppGpp 3-pyrophosphohydrolase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 702

 Score =  335 bits (860), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 196/482 (40%), Positives = 287/482 (59%), Gaps = 52/482 (10%)

Query: 143 PNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVE 202
           P E +++ RA     E H GQ R+SGEP++IHP+EVA+ L EL +D  ++ AGLLHDT+E
Sbjct: 20  PEERDIIHRAFEFVSEKHSGQLRKSGEPYVIHPLEVAKTLAELNMDSTTVIAGLLHDTLE 79

Query: 203 DTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTE 262
           DT+  T+E IEE FG  V  IVEG   V+K+GK+K KN    +++ +A++ R++ LA  +
Sbjct: 80  DTDT-TYEEIEELFGKDVADIVEG---VTKIGKIKFKN----LREAQAENFRKLILATAK 131

Query: 263 EVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFM 322
           ++RV++VKLADRLHNM+TL+H+   K+  IA ETL+V+AP+A  LG+++IK  LE+LSF 
Sbjct: 132 DIRVVVVKLADRLHNMKTLNHLRRDKRIRIAEETLEVYAPIAHRLGIWEIKRSLEDLSFK 191

Query: 323 YTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYS 382
           Y   ++Y +V++ V+   ++ E  L+   K ++ K+ ++  +    +K E+    K  YS
Sbjct: 192 YLYPKEYERVRKFVSQSLEDLEVYLK---KFVIPKVREE--IKKAGIKAEVTYRPKHLYS 246

Query: 383 IYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRA 442
           I++  ++    + EV+ +  +RII+               Q CY VLGL+H ++ P+P  
Sbjct: 247 IWQKTIRKNIGLEEVHDLLGVRIIV------------DTIQECYVVLGLIHSLFKPVPGK 294

Query: 443 MKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTG 502
            KDYI+ PKPN YQSLHTT++         +E QIRT EM L AERGIAAH+        
Sbjct: 295 FKDYISLPKPNLYQSLHTTVVA---PKGRMVEFQIRTREMHLRAERGIAAHW-------- 343

Query: 503 LVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLG 562
               A   GR    +             SWL   R   E   G+    E +D + R+L  
Sbjct: 344 ----AYKEGRERVQEEEVF---------SWL---RSLVENIQGSKNPSEVLDNLKRELFS 387

Query: 563 SRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEI 622
             VFVFTP+G++  LP GAT +D+AY IHTE+GN    AKVNG +V   + L + + VEI
Sbjct: 388 EEVFVFTPKGDLIVLPVGATPIDFAYHIHTEVGNHCAGAKVNGRIVPLNYRLQSGDQVEI 447

Query: 623 IT 624
           IT
Sbjct: 448 IT 449


>gi|449924993|ref|ZP_21799979.1| putative stringent response protein [Streptococcus mutans 4SM1]
 gi|450072770|ref|ZP_21848773.1| putative stringent response protein [Streptococcus mutans M2A]
 gi|449162069|gb|EMB65228.1| putative stringent response protein [Streptococcus mutans 4SM1]
 gi|449210842|gb|EMC11273.1| putative stringent response protein [Streptococcus mutans M2A]
          Length = 740

 Score =  335 bits (860), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 188/491 (38%), Positives = 289/491 (58%), Gaps = 49/491 (9%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++  ++  V++AL  A E H GQ R+SGEP+IIHP++VA IL +L LD  +++ G LHD
Sbjct: 19  YMNKADIAFVQKALDYATECHSGQFRKSGEPYIIHPIQVAGILADLHLDAITVSCGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            +EDT   T + ++ +FG+ V+ IV+G   V+KLGK++ K+    +    A++ R+M +A
Sbjct: 79  VIEDTEA-TLDHLDAKFGSDVKNIVDG---VTKLGKVEYKSHEEQL----AENHRKMLMA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M++++RVI+VKLADRLHNMRTL H+   KQ  I+ ET++++APLA  LG+ +IK ELE+L
Sbjct: 131 MSKDIRVILVKLADRLHNMRTLRHLRKDKQERISRETMEIYAPLAHRLGISRIKWELEDL 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           +F Y N  ++ K    ++ L  E  +E E     ++ KI+   + +   +  EI    K 
Sbjct: 191 AFRYLNEVEFYK----ISHLMNEKRREREALVDDIVDKIK--AYTEEQGLHGEIYGRPKH 244

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIY+ +   +   +++  +  +R I+              Q   Y +LG +H +W P+
Sbjct: 245 IYSIYRKMRDKKKRFDQIYDLIAIRCIL------------DTQSDVYAMLGYIHELWRPM 292

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK NGYQS+HTT    +Y     +EVQIRT EM  +AE G+AAH++ +  
Sbjct: 293 PGRFKDYIANPKANGYQSIHTT----VYGPKGPIEVQIRTHEMHQVAEYGVAAHWAYKKG 348

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
           + G V                 N+   AL ++W+  + E Q+   GN    +FVD++  D
Sbjct: 349 IKGKV-----------------NSQESALGMNWIKELVELQDASNGNAV--DFVDSVKED 389

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           +   R++VFTP G ++ LPK +  +D+AY IHT++G K   AKVNG +V  T  L   +V
Sbjct: 390 IFAERIYVFTPNGAVQELPKDSGPIDFAYAIHTQVGEKATGAKVNGRMVPLTAKLKTGDV 449

Query: 620 VEIITYNVSFS 630
           VEIIT + SF 
Sbjct: 450 VEIITNSNSFG 460


>gi|449920505|ref|ZP_21798522.1| putative stringent response protein [Streptococcus mutans 1SM1]
 gi|450105609|ref|ZP_21859976.1| putative stringent response protein [Streptococcus mutans SF14]
 gi|450116699|ref|ZP_21864639.1| putative stringent response protein [Streptococcus mutans ST1]
 gi|450132194|ref|ZP_21869901.1| putative stringent response protein [Streptococcus mutans NLML8]
 gi|449153346|gb|EMB57028.1| putative stringent response protein [Streptococcus mutans NLML8]
 gi|449158789|gb|EMB62197.1| putative stringent response protein [Streptococcus mutans 1SM1]
 gi|449224241|gb|EMC23887.1| putative stringent response protein [Streptococcus mutans SF14]
 gi|449226803|gb|EMC26294.1| putative stringent response protein [Streptococcus mutans ST1]
          Length = 740

 Score =  335 bits (860), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 188/491 (38%), Positives = 289/491 (58%), Gaps = 49/491 (9%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++  ++  V++AL  A E H GQ R+SGEP+IIHP++VA IL +L LD  +++ G LHD
Sbjct: 19  YMNKADIAFVQKALDYATECHSGQFRKSGEPYIIHPIQVAGILADLHLDAITVSCGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            +EDT   T + +E +FG+ V+ IV+G   V+KLGK++ K+    +    A++ R+M +A
Sbjct: 79  VIEDTEA-TLDHLEAKFGSDVKNIVDG---VTKLGKVEYKSHEEQL----AENHRKMLMA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M++++RVI+VKLADRLHNMRTL H+   KQ  I+ ET++++APLA  LG+ +IK ELE+L
Sbjct: 131 MSKDIRVILVKLADRLHNMRTLRHLRKDKQERISRETMEIYAPLAHRLGISRIKWELEDL 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           +F Y N  ++ K    ++ L  E  +E E     ++ KI+   + +   +  +I    K 
Sbjct: 191 AFRYLNEVEFYK----ISHLMNEKRREREALVDDIVDKIK--AYTEEQGLHGDIYGRPKH 244

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIY+ +   +   +++  +  +R I+              Q   Y +LG +H +W P+
Sbjct: 245 IYSIYRKMRDKKKRFDQIYDLIAIRCIL------------DTQSDVYAMLGYIHELWRPM 292

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK NGYQS+HTT    +Y     +EVQIRT EM  +AE G+AAH++ +  
Sbjct: 293 PGRFKDYIANPKANGYQSIHTT----VYGPKGPIEVQIRTHEMHQVAEYGVAAHWAYKKG 348

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
           + G V                 N+   AL ++W+  + E Q+   GN    +FVD++  D
Sbjct: 349 IKGKV-----------------NSQESALGMNWIKELVELQDASNGNAV--DFVDSVKED 389

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           +   R++VFTP G ++ LPK +  +D+AY IHT++G K   AKVNG +V  T  L   +V
Sbjct: 390 IFAERIYVFTPNGAVQELPKDSGPIDFAYAIHTQVGEKATGAKVNGRMVPLTAKLKTGDV 449

Query: 620 VEIITYNVSFS 630
           VEIIT + SF 
Sbjct: 450 VEIITNSNSFG 460


>gi|58337233|ref|YP_193818.1| ppGpp synthetase [Lactobacillus acidophilus NCFM]
 gi|58254550|gb|AAV42787.1| ppGpp synthetase [Lactobacillus acidophilus NCFM]
          Length = 746

 Score =  335 bits (860), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 195/485 (40%), Positives = 284/485 (58%), Gaps = 49/485 (10%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++ +++  V RA   A +AH GQKR SG+P+IIHP +VA  L  L LD ++IAAG LHD
Sbjct: 19  YMNEDQVAFVERAYEFANKAHAGQKRASGQPYIIHPTQVAGTLANLGLDPDTIAAGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
           TVEDT  VT + ++E+FG  V  IV+G TK++K        E +S Q+  A++ R+M +A
Sbjct: 79  TVEDT-PVTNDELKEKFGEDVAFIVDGVTKLNKY-------EYNSHQEFLAENHRKMLIA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M +++RVI+VKLADRLHNM TL H+ P KQ  IA+ET+ ++APLA  LG+  IK ELE++
Sbjct: 131 MAKDLRVIMVKLADRLHNMHTLQHLRPDKQRRIASETMDIYAPLADRLGIGTIKWELEDM 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           SF Y N E Y ++   +     + EK + +  K L K       LD + +K +I    K 
Sbjct: 191 SFHYLNPEAYYRIVNLMDVKRSQREKYISDTIKTLKKT------LDELGIKYDIYGRPKH 244

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIYK ++      +E+  +  +R+I+K              + CY VLG VH  W P+
Sbjct: 245 IYSIYKKMVNKHKDFDEIYDLLAVRVIVK------------NVRDCYAVLGAVHTEWKPM 292

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK NGYQSLHTT+I         LE+QIRTE+M  +AE G+AAH++ +  
Sbjct: 293 PGRFKDYIAMPKVNGYQSLHTTIIG---PGGRPLEIQIRTEQMHEVAEYGVAAHWAYK-- 347

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
                          RG    +   +   ++  +  I E ++E      + EF+ ++  D
Sbjct: 348 ---------------RGNFNGVEATSSGEKLDMVREILELKDE---TKDAGEFMKSVKSD 389

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           +   RV+VFTP+GE+  LPKG+  +D+AY IHT++G+  V A+VN  LV   + L N +V
Sbjct: 390 IFSDRVYVFTPKGEVYELPKGSVTLDFAYAIHTQVGSHAVGARVNNKLVPLDYKLRNGDV 449

Query: 620 VEIIT 624
           +EI+T
Sbjct: 450 IEIMT 454


>gi|449894471|ref|ZP_21789272.1| putative stringent response protein [Streptococcus mutans SF12]
 gi|449255314|gb|EMC53172.1| putative stringent response protein [Streptococcus mutans SF12]
          Length = 740

 Score =  335 bits (859), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 189/491 (38%), Positives = 288/491 (58%), Gaps = 49/491 (9%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++  ++  V++AL  A E H GQ R+SGEP+IIHP++VA IL +L LD  +++ G LHD
Sbjct: 19  YMNKADIAFVQKALDYATECHSGQFRKSGEPYIIHPIQVAGILADLHLDAITVSCGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            +EDT   T + +E +FG+ V+ IV+G   V+KLGK++ K+    +    A++ R+M +A
Sbjct: 79  VIEDTEA-TLDHLEAKFGSDVKNIVDG---VTKLGKVEYKSHEEQL----AENHRKMLMA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M++++RVI+VKLADRLHNMRTL H+   KQ  I+ ET++++APLA  LG+ +IK ELE+L
Sbjct: 131 MSKDIRVILVKLADRLHNMRTLRHLRKDKQGRISRETMEIYAPLAHRLGISRIKWELEDL 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           +F Y N  ++ K    ++ L  E  +E E     ++ KI+   +     +  EI    K 
Sbjct: 191 AFRYLNEVEFYK----ISHLMNEKRREREALVDDIVDKIK--AYTAEQGLHGEIYGRPKH 244

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIY+ +   +   +++  +  +R I+              Q   Y +LG +H +W P+
Sbjct: 245 IYSIYRKMRDKKKRFDQIYDLIAIRCIL------------DTQSDVYAMLGYIHELWRPM 292

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK NGYQS+HTT    +Y     +EVQIRT EM  +AE G+AAH++ +  
Sbjct: 293 PGRFKDYIANPKANGYQSIHTT----VYGPKGPIEVQIRTHEMHQVAEYGVAAHWAYKKG 348

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
           + G V                 N+   AL ++W+  + E Q+   GN    +FVD++  D
Sbjct: 349 IKGKV-----------------NSQESALGMNWIKELVELQDASNGNAV--DFVDSVKED 389

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           +   R++VFTP G ++ LPK +  +D+AY IHT++G K   AKVNG +V  T  L   +V
Sbjct: 390 IFAERIYVFTPNGAVQELPKDSGPIDFAYAIHTQVGEKATGAKVNGRMVPLTAKLKTGDV 449

Query: 620 VEIITYNVSFS 630
           VEIIT + SF 
Sbjct: 450 VEIITNSNSFG 460


>gi|104773939|ref|YP_618919.1| GTP pyrophosphokinase [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC 11842]
 gi|103423020|emb|CAI97706.1| GTP pyrophosphokinase [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC 11842]
          Length = 753

 Score =  335 bits (859), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 199/485 (41%), Positives = 281/485 (57%), Gaps = 50/485 (10%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++ ++L  V  A   A  AH+GQ R SG+P+I+HP +VA IL  L LD +++AAG LHD
Sbjct: 19  YITADQLAFVESAYQFAARAHEGQTRASGQPYIVHPTQVAGILANLGLDPDTVAAGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
           TVEDT+V T + I+E+FGA V  IV+G TK++K        E  S ++  A++ R+M +A
Sbjct: 79  TVEDTSV-TNDDIKEKFGADVAFIVDGVTKLNKY-------EYKSHKEFLAENHRKMLIA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M +++RVI+VKLADRLHNM TL H+ P KQ  IA ETL ++APLA  LG+  IK +LE++
Sbjct: 131 MAKDLRVILVKLADRLHNMHTLEHLRPDKQRRIAAETLDIYAPLADRLGIGTIKWKLEDM 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           SF Y N E Y K+   +     E E  +++A   L         LD + +K +I    K 
Sbjct: 191 SFHYMNPEAYYKIVSMMDAKRSEREGYIKDAIDYLRGT------LDSLGIKYDISGRPKH 244

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIYK ++    + NE+  +  +R+I+         P       CY VLG VH  W P+
Sbjct: 245 IYSIYKKMVNKHKNFNEIYDLLAVRVIV---------PTVKD---CYAVLGAVHTKWKPM 292

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK NGYQSLHTT+I         LE+QIRTEEM  +AE G+AAH++    
Sbjct: 293 PGRFKDYIAMPKANGYQSLHTTIIG---PGGKPLEIQIRTEEMHKVAEYGVAAHWA---- 345

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
                 + R N +    K         AL I      RE  E    +  + EF++ +  D
Sbjct: 346 ------YKRGNFQGVDEKEGG------ALDIG-----REILELQKDSSDADEFMEAVHSD 388

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           +   +V+VFTP+GE+  LPKG+  +D+AY IHT++G+  + AKVN  LV   + L N +V
Sbjct: 389 IFADKVYVFTPKGEVYELPKGSVTLDFAYAIHTQVGDHAIGAKVNDKLVPLDYKLKNGDV 448

Query: 620 VEIIT 624
           V+I+T
Sbjct: 449 VDILT 453


>gi|424845459|ref|ZP_18270070.1| (p)ppGpp synthetase, RelA/SpoT family [Jonquetella anthropi DSM
           22815]
 gi|363986897|gb|EHM13727.1| (p)ppGpp synthetase, RelA/SpoT family [Jonquetella anthropi DSM
           22815]
          Length = 762

 Score =  335 bits (859), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 200/495 (40%), Positives = 290/495 (58%), Gaps = 54/495 (10%)

Query: 131 WEDLRPTIS-YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDW 189
           W +L   IS YL+ +EL+ V  A + A  AH  Q R  GEP+IIHPV  A IL +++LD 
Sbjct: 48  WRELWSKISRYLNRDELKGVGEAFVFAAGAHGEQMRMGGEPYIIHPVFAASILADMKLDV 107

Query: 190 ESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVK 249
            ++ A LLHD +EDT   T E++ E FG  V  +V+G   V+KLGKL  K    + +D +
Sbjct: 108 ATLQAALLHDVLEDTEC-TAEQMRERFGEVVTTLVDG---VTKLGKLPFK----TFEDYQ 159

Query: 250 ADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGM 309
           A++LR+MFL M +++RV+++KLADR HNMR+L  M   KQ   A ETL+++APLA  LG+
Sbjct: 160 AENLRKMFLVMAKDIRVVLIKLADRTHNMRSLGAMRRDKQIRTAKETLEIYAPLAHRLGI 219

Query: 310 YQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTV 369
           YQ+K  LE+L+F Y + E Y ++K +V     E E  +E+A +IL  +      LD M +
Sbjct: 220 YQMKRTLEDLAFKYYDPEMYYEIKSKVKKRLPEREAVVEQALEILQAR------LDEMGI 273

Query: 370 KTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVL 429
           K  I+   K  YSIY+ + + + SI+++  +  LR+I++                CY VL
Sbjct: 274 KNSIKGRAKHFYSIYEKMNRKKLSIDQLYDLLALRVIVEDVAQ------------CYSVL 321

Query: 430 GLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERG 489
           G+VH IW PIP    DYIA PK N YQSLHTT+   L  S   LEVQIRT  M   AE G
Sbjct: 322 GVVHTIWKPIPGQFDDYIANPKNNMYQSLHTTV---LGPSGEPLEVQIRTWAMHWRAEYG 378

Query: 490 IAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTS 549
           +AAH+                 R   G +   +  ++  ++ W+    E  +E      S
Sbjct: 379 VAAHW-----------------RYKEGDS---HVDDLDSKLEWIRRALEGSDE----TNS 414

Query: 550 REFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVS 609
            EF++ +  D+L S VFVFTP G++KNLP+G+TVVD+A+ +HT++G + V A VN  +V 
Sbjct: 415 EEFMERLKDDVLTSDVFVFTPEGDVKNLPRGSTVVDFAFSVHTQVGEQYVGAMVNNRIVP 474

Query: 610 PTHVLANAEVVEIIT 624
             + L N ++V+I+T
Sbjct: 475 ADYELHNGDIVKIMT 489


>gi|333905747|ref|YP_004479618.1| GTP pyrophosphokinase [Streptococcus parauberis KCTC 11537]
 gi|333121012|gb|AEF25946.1| GTP pyrophosphokinase [Streptococcus parauberis KCTC 11537]
          Length = 739

 Score =  335 bits (859), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 191/491 (38%), Positives = 294/491 (59%), Gaps = 49/491 (9%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++  +L LV++AL  A +AH  Q R+SGEP+IIHP++VA IL +L+LD  ++A G LHD
Sbjct: 19  YMNDKDLALVKKALGYATDAHFYQARKSGEPYIIHPIQVAGILADLQLDAVTVACGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            VEDT + T E IE+EFG  VR IV+G   V+KLGK++ K+    +    A++ R+M +A
Sbjct: 79  VVEDTEI-TLEDIEDEFGKDVRDIVDG---VTKLGKVEYKSHEEQL----AENHRKMLMA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M+ ++RVI+VKL+DRLHNMRTL H+   KQ  I+ ET++++APLA  LG+ +IK ELE+L
Sbjct: 131 MSRDIRVILVKLSDRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELEDL 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           SF Y N  ++ K+   +++  +E E  +   + I+ K I    + +   +  E+    K 
Sbjct: 191 SFRYLNEIEFYKITHLMSEKRREREALV---DNIVEKII---SYTNEQGLYGEVYGRPKH 244

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIY+ +   +   +++  +  +R I++             Q   Y ++G +H +W P+
Sbjct: 245 IYSIYRKMRDKKKRFDQIFDLIAIRCIME------------TQSDVYAMVGYIHELWRPM 292

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK NGYQS+HTT    +Y     +E+QIRT+EM  +AE G+AAH++   +
Sbjct: 293 PGRFKDYIAAPKANGYQSIHTT----VYGPKGPIEIQIRTKEMHQVAEYGVAAHWA---Y 345

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
             GL G       S   + V +N         W+N + E Q+    N  +++FVD++  +
Sbjct: 346 KKGLKGKV-----SQSDQKVGMN---------WINELVELQD--ASNGDAKDFVDSVKEE 389

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           +   R++VFTP G ++ LPK +  +D+AY IHT++G K   AKVNG +V  T  L   +V
Sbjct: 390 IFSERIYVFTPNGAVQELPKESGPIDFAYAIHTQVGEKATGAKVNGKMVPLTSRLKTGDV 449

Query: 620 VEIITYNVSFS 630
           VEI+T   SF 
Sbjct: 450 VEIVTNPNSFG 460


>gi|456370069|gb|EMF48967.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Streptococcus
           parauberis KRS-02109]
 gi|457094333|gb|EMG24862.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Streptococcus
           parauberis KRS-02083]
          Length = 739

 Score =  335 bits (859), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 191/491 (38%), Positives = 294/491 (59%), Gaps = 49/491 (9%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++  +L LV++AL  A +AH  Q R+SGEP+IIHP++VA IL +L+LD  ++A G LHD
Sbjct: 19  YMNDKDLALVKKALGYATDAHFYQARKSGEPYIIHPIQVAGILADLQLDAVTVACGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            VEDT + T E IE+EFG  VR IV+G   V+KLGK++ K+    +    A++ R+M +A
Sbjct: 79  VVEDTEI-TLEDIEDEFGKDVRDIVDG---VTKLGKVEYKSHEEQL----AENHRKMLMA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M+ ++RVI+VKL+DRLHNMRTL H+   KQ  I+ ET++++APLA  LG+ +IK ELE+L
Sbjct: 131 MSRDIRVILVKLSDRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELEDL 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           SF Y N  ++ K+   +++  +E E  +   + I+ K I    + +   +  E+    K 
Sbjct: 191 SFRYLNEIEFYKITHLMSEKRREREALV---DNIVEKII---SYTNEQGLYGEVYGRPKH 244

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIY+ +   +   +++  +  +R I++             Q   Y ++G +H +W P+
Sbjct: 245 IYSIYRKMRDKKKRFDQIFDLIAIRCIME------------TQSDVYAMVGYIHELWRPM 292

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK NGYQS+HTT    +Y     +E+QIRT+EM  +AE G+AAH++   +
Sbjct: 293 PGRFKDYIAAPKANGYQSIHTT----VYGPKGPIEIQIRTKEMHQVAEYGVAAHWA---Y 345

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
             GL G       S   + V +N         W+N + E Q+    N  +++FVD++  +
Sbjct: 346 KKGLKGKV-----SQSDQKVGMN---------WINELVELQD--ASNGDAKDFVDSVKEE 389

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           +   R++VFTP G ++ LPK +  +D+AY IHT++G K   AKVNG +V  T  L   +V
Sbjct: 390 IFSERIYVFTPNGAVQELPKESGPIDFAYAIHTQVGEKATGAKVNGKMVPLTSRLKTGDV 449

Query: 620 VEIITYNVSFS 630
           VEI+T   SF 
Sbjct: 450 VEIVTNPNSFG 460


>gi|449942830|ref|ZP_21806212.1| putative stringent response protein [Streptococcus mutans 11A1]
 gi|449149893|gb|EMB53675.1| putative stringent response protein [Streptococcus mutans 11A1]
          Length = 740

 Score =  335 bits (859), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 189/491 (38%), Positives = 288/491 (58%), Gaps = 49/491 (9%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++  ++  V++AL  A E H GQ R+SGEP+IIHP++VA IL +L LD  +++ G LHD
Sbjct: 19  YMNKADIAFVQKALDYATECHSGQFRKSGEPYIIHPIQVAGILADLHLDAITVSCGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            +EDT   T + +E +FG+ V+ IV+G   V+KLGK++ K+    +    A++ R+M +A
Sbjct: 79  VIEDTEA-TLDHLEAKFGSDVKNIVDG---VTKLGKVEYKSHEEQL----AENHRKMLMA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M++++RVI+VKLADRLHNMRTL H+   KQ  I+ ET++++APLA  LG+ +IK ELE+L
Sbjct: 131 MSKDIRVILVKLADRLHNMRTLRHLRKDKQERISRETMEIYAPLAHRLGISRIKWELEDL 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           +F Y N  ++ K    ++ L  E  +E E     ++ KI+   +     +  EI    K 
Sbjct: 191 AFRYLNEVEFYK----ISHLMNEKRREREALVDDIVDKIK--AYTAEQGLHGEIYGRPKH 244

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIY+ +   +   +++  +  +R I+              Q   Y +LG +H +W P+
Sbjct: 245 IYSIYRKMRDKKKRFDQIYDLIAIRCIL------------DTQSDVYAMLGYIHELWRPM 292

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK NGYQS+HTT    +Y     +EVQIRT EM  +AE G+AAH++ +  
Sbjct: 293 PGRFKDYIANPKANGYQSIHTT----VYGPKGPIEVQIRTHEMHQVAEYGVAAHWAYKKG 348

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
           + G V                 N+   AL ++W+  + E Q+   GN    +FVD++  D
Sbjct: 349 IKGKV-----------------NSQESALGMNWIKELVELQDASNGNAV--DFVDSVKED 389

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           +   R++VFTP G ++ LPK +  +D+AY IHT++G K   AKVNG +V  T  L   +V
Sbjct: 390 IFAERIYVFTPNGAVQELPKDSGPIDFAYAIHTQVGEKATGAKVNGRMVPLTAKLKTGDV 449

Query: 620 VEIITYNVSFS 630
           VEIIT + SF 
Sbjct: 450 VEIITNSNSFG 460


>gi|24380383|ref|NP_722338.1| stringent response protein, ppGpp synthetase [Streptococcus mutans
           UA159]
 gi|290581316|ref|YP_003485708.1| stringent response protein [Streptococcus mutans NN2025]
 gi|397650579|ref|YP_006491106.1| stringent response protein [Streptococcus mutans GS-5]
 gi|449864642|ref|ZP_21778500.1| putative stringent response protein [Streptococcus mutans U2B]
 gi|449869513|ref|ZP_21780160.1| putative stringent response protein [Streptococcus mutans 8ID3]
 gi|449878530|ref|ZP_21783637.1| putative stringent response protein [Streptococcus mutans S1B]
 gi|449908491|ref|ZP_21793758.1| putative stringent response protein [Streptococcus mutans OMZ175]
 gi|449969227|ref|ZP_21813102.1| putative stringent response protein [Streptococcus mutans 2VS1]
 gi|449983773|ref|ZP_21818644.1| putative stringent response protein [Streptococcus mutans NFSM2]
 gi|450030621|ref|ZP_21833312.1| putative stringent response protein [Streptococcus mutans G123]
 gi|450034381|ref|ZP_21834336.1| putative stringent response protein [Streptococcus mutans M21]
 gi|450040883|ref|ZP_21837081.1| putative stringent response protein [Streptococcus mutans T4]
 gi|450058894|ref|ZP_21843257.1| putative stringent response protein [Streptococcus mutans NLML4]
 gi|450081094|ref|ZP_21851499.1| putative stringent response protein [Streptococcus mutans N66]
 gi|450088031|ref|ZP_21854598.1| putative stringent response protein [Streptococcus mutans NV1996]
 gi|450092583|ref|ZP_21856088.1| putative stringent response protein [Streptococcus mutans W6]
 gi|450100438|ref|ZP_21858768.1| putative stringent response protein [Streptococcus mutans SF1]
 gi|450110680|ref|ZP_21862254.1| putative stringent response protein [Streptococcus mutans SM6]
 gi|450145723|ref|ZP_21874719.1| putative stringent response protein [Streptococcus mutans 1ID3]
 gi|450149159|ref|ZP_21875997.1| putative stringent response protein [Streptococcus mutans 14D]
 gi|450163970|ref|ZP_21881041.1| putative stringent response protein [Streptococcus mutans B]
 gi|450171293|ref|ZP_21883920.1| putative stringent response protein [Streptococcus mutans SM4]
 gi|450174728|ref|ZP_21884759.1| putative stringent response protein [Streptococcus mutans SM1]
 gi|24378405|gb|AAN59644.1|AE015027_2 putative stringent response protein, ppGpp synthetase
           [Streptococcus mutans UA159]
 gi|254998215|dbj|BAH88816.1| putative stringent response protein [Streptococcus mutans NN2025]
 gi|392604148|gb|AFM82312.1| stringent response protein [Streptococcus mutans GS-5]
 gi|449148979|gb|EMB52804.1| putative stringent response protein [Streptococcus mutans 1ID3]
 gi|449158226|gb|EMB61648.1| putative stringent response protein [Streptococcus mutans 8ID3]
 gi|449174347|gb|EMB76841.1| putative stringent response protein [Streptococcus mutans 2VS1]
 gi|449181029|gb|EMB83161.1| putative stringent response protein [Streptococcus mutans NFSM2]
 gi|449192573|gb|EMB93988.1| putative stringent response protein [Streptococcus mutans G123]
 gi|449196484|gb|EMB97749.1| putative stringent response protein [Streptococcus mutans M21]
 gi|449198334|gb|EMB99451.1| putative stringent response protein [Streptococcus mutans T4]
 gi|449203549|gb|EMC04406.1| putative stringent response protein [Streptococcus mutans NLML4]
 gi|449215571|gb|EMC15753.1| putative stringent response protein [Streptococcus mutans N66]
 gi|449216951|gb|EMC17030.1| putative stringent response protein [Streptococcus mutans NV1996]
 gi|449218136|gb|EMC18158.1| putative stringent response protein [Streptococcus mutans W6]
 gi|449220417|gb|EMC20288.1| putative stringent response protein [Streptococcus mutans SF1]
 gi|449224680|gb|EMC24306.1| putative stringent response protein [Streptococcus mutans SM6]
 gi|449234882|gb|EMC33868.1| putative stringent response protein [Streptococcus mutans 14D]
 gi|449242427|gb|EMC41013.1| putative stringent response protein [Streptococcus mutans B]
 gi|449244244|gb|EMC42626.1| putative stringent response protein [Streptococcus mutans SM4]
 gi|449248184|gb|EMC46445.1| putative stringent response protein [Streptococcus mutans SM1]
 gi|449249393|gb|EMC47525.1| putative stringent response protein [Streptococcus mutans S1B]
 gi|449262905|gb|EMC60343.1| putative stringent response protein [Streptococcus mutans OMZ175]
 gi|449264713|gb|EMC62048.1| putative stringent response protein [Streptococcus mutans U2B]
          Length = 740

 Score =  335 bits (859), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 189/491 (38%), Positives = 288/491 (58%), Gaps = 49/491 (9%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++  ++  V++AL  A E H GQ R+SGEP+IIHP++VA IL +L LD  +++ G LHD
Sbjct: 19  YMNKADIAFVQKALDYATECHSGQFRKSGEPYIIHPIQVAGILADLHLDAITVSCGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            +EDT   T + +E +FG+ V+ IV+G   V+KLGK++ K+    +    A++ R+M +A
Sbjct: 79  VIEDTEA-TLDHLEAKFGSDVKNIVDG---VTKLGKVEYKSHEEQL----AENHRKMLMA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M++++RVI+VKLADRLHNMRTL H+   KQ  I+ ET++++APLA  LG+ +IK ELE+L
Sbjct: 131 MSKDIRVILVKLADRLHNMRTLRHLRKDKQERISRETMEIYAPLAHRLGISRIKWELEDL 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           +F Y N  ++ K    ++ L  E  +E E     ++ KI+   +     +  EI    K 
Sbjct: 191 AFRYLNEVEFYK----ISHLMNEKRREREALVDDIVDKIK--AYTAEQGLHGEIYGRPKH 244

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIY+ +   +   +++  +  +R I+              Q   Y +LG +H +W P+
Sbjct: 245 IYSIYRKMRDKKKRFDQIYDLIAIRCIL------------DTQSDVYAMLGYIHELWRPM 292

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK NGYQS+HTT    +Y     +EVQIRT EM  +AE G+AAH++ +  
Sbjct: 293 PGRFKDYIANPKANGYQSIHTT----VYGPKGPIEVQIRTHEMHQVAEYGVAAHWAYKKG 348

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
           + G V                 N+   AL ++W+  + E Q+   GN    +FVD++  D
Sbjct: 349 IKGKV-----------------NSQESALGMNWIKELVELQDASNGNAV--DFVDSVKED 389

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           +   R++VFTP G ++ LPK +  +D+AY IHT++G K   AKVNG +V  T  L   +V
Sbjct: 390 IFAERIYVFTPNGAVQELPKDSGPIDFAYAIHTQVGEKATGAKVNGRMVPLTAKLKTGDV 449

Query: 620 VEIITYNVSFS 630
           VEIIT + SF 
Sbjct: 450 VEIITNSNSFG 460


>gi|319940232|ref|ZP_08014584.1| GTP pyrophosphokinase [Streptococcus anginosus 1_2_62CV]
 gi|319810534|gb|EFW06870.1| GTP pyrophosphokinase [Streptococcus anginosus 1_2_62CV]
          Length = 738

 Score =  335 bits (859), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 194/494 (39%), Positives = 292/494 (59%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YLS  ++ LV++AL+ A + H GQ R+SGEP+IIHP++VA IL +L+LD  S+A G 
Sbjct: 16  TRKYLSSEDVALVQKALVYAVDRHRGQFRQSGEPYIIHPIQVAGILAKLKLDAVSVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDTN  T + +E EFG  VR IV+G   V+KLGK+K  +    +    A++ R+M
Sbjct: 76  LHDVVEDTNA-TLDDLEREFGHEVRVIVDG---VTKLGKVKYMSHEEQL----AENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM++++RVI+VKLADRLHNMRTL H+   KQ  I+ ET++++APLA  LG+  +K EL
Sbjct: 128 LMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISSVKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+L+F Y N  ++ K    ++ L KE  +E EE    ++ KIE   +     +  EI   
Sbjct: 188 EDLAFRYLNPTEFYK----ISHLMKEKRREREELVDEVVHKIE--TYASERNLHGEIYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSIY+ +   +   +E+  +  +R I+              Q   Y +LG +H +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFDEIYDLIAIRCIL------------DTQSDVYAMLGYIHELW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA  K NGYQS+HTT    +Y     +E QIRT+EM  +AE G+AAH++ 
Sbjct: 290 RPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  + G V                 ++   A+ ++W+  + E Q++   +  +++FVD++
Sbjct: 346 KKGIKGQV-----------------DSKESAIGMNWIKEMMELQDQ---SNDAQDFVDSV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             + L   ++VFTP G +++LPK +  +D+AY IHT++G K V AKVNG +V  T  L  
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKAVGAKVNGRMVPLTTKLKT 445

Query: 617 AEVVEIITYNVSFS 630
            + VEIIT   SF 
Sbjct: 446 GDQVEIITSTNSFG 459


>gi|408421441|ref|YP_006762855.1| GTP pyrophosphokinase RelA [Desulfobacula toluolica Tol2]
 gi|405108654|emb|CCK82151.1| RelA: GTP pyrophosphokinase [Desulfobacula toluolica Tol2]
          Length = 717

 Score =  335 bits (859), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 197/497 (39%), Positives = 284/497 (57%), Gaps = 53/497 (10%)

Query: 129 RLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
           R+ + L     Y    + +++ RA + +   HDGQ R SGEP++ HP+EVA IL ++ LD
Sbjct: 3   RINDILDKIYEYNPEGDCDIIDRAYVYSARVHDGQVRLSGEPYLSHPLEVANILADMRLD 62

Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
            ESIAA LLHD +EDT   T E IE+ FG  V  IV G TK+S L     K         
Sbjct: 63  VESIAAALLHDVIEDTPA-TREDIEDMFGPGVAHIVSGVTKLSAL-PFSTKIAQ------ 114

Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLS-HMPPHKQSSIATETLQVFAPLAKLL 307
           +A+ LR+M LAM +++RV+++KLADR+HNMRTL  H  P KQ++IA ETL ++AP+A  L
Sbjct: 115 QAESLRKMILAMADDIRVVLIKLADRIHNMRTLKYHRKPEKQAAIAQETLDIYAPIAARL 174

Query: 308 GMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLM 367
           G++ +K ELE+++F YT   +Y ++K  V     E E  +   N+ L +K+++      M
Sbjct: 175 GIFWMKYELEDIAFYYTKRHEYERIKALVNKARHEKEDYIITVNEKLHEKMKE------M 228

Query: 368 TVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYH 427
            ++ EI+   K+ YSIY+ ++      NEV  +   RII+   P             CY 
Sbjct: 229 NLEAEIKGRYKQNYSIYQKMISQNLDFNEVYDVIAFRIILDTVPQ------------CYA 276

Query: 428 VLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAE 487
            +G +H +W PI   +KDYI  PKPN YQS+HTT++    E   R+E+QIRT++MD IAE
Sbjct: 277 AMGAIHSMWKPIYYKIKDYIGNPKPNMYQSIHTTVVGPKGE---RVEIQIRTQDMDNIAE 333

Query: 488 RGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNM 547
            GIAAH+S +                  G  +  N   +    +W+  + E QE +    
Sbjct: 334 SGIAAHWSYK-----------------EGSKIDENTGEL---FAWIRNLVENQENY---N 370

Query: 548 TSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNL 607
              EF++ +  DL    ++VFTP+GEIK LPK AT VD+AY IHTE+G +   AKVNG +
Sbjct: 371 DPDEFLENVRIDLYPDEIYVFTPQGEIKILPKKATPVDFAYRIHTEVGAECTGAKVNGKI 430

Query: 608 VSPTHVLANAEVVEIIT 624
           V  +H L   + +EIIT
Sbjct: 431 VQLSHRLKTGDTIEIIT 447


>gi|260655712|ref|ZP_05861185.1| GTP diphosphokinase [Jonquetella anthropi E3_33 E1]
 gi|260629629|gb|EEX47823.1| GTP diphosphokinase [Jonquetella anthropi E3_33 E1]
          Length = 762

 Score =  335 bits (859), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 200/495 (40%), Positives = 290/495 (58%), Gaps = 54/495 (10%)

Query: 131 WEDLRPTIS-YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDW 189
           W +L   IS YL+ +EL+ V  A + A  AH  Q R  GEP+IIHPV  A IL +++LD 
Sbjct: 48  WRELWSKISRYLNRDELKGVGEAFVFAAGAHGEQMRMGGEPYIIHPVFAASILADMKLDV 107

Query: 190 ESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVK 249
            ++ A LLHD +EDT   T E++ E FG  V  +V+G   V+KLGKL  K    + +D +
Sbjct: 108 ATLQAALLHDVLEDTEC-TAEQMRERFGEVVTTLVDG---VTKLGKLPFK----TFEDYQ 159

Query: 250 ADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGM 309
           A++LR+MFL M +++RV+++KLADR HNMR+L  M   KQ   A ETL+++APLA  LG+
Sbjct: 160 AENLRKMFLVMAKDIRVVLIKLADRAHNMRSLGAMRRDKQIRTAKETLEIYAPLAHRLGI 219

Query: 310 YQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTV 369
           YQ+K  LE+L+F Y + E Y ++K +V     E E  +E+A +IL  +      LD M +
Sbjct: 220 YQMKRTLEDLAFKYYDPEMYYEIKSKVKKRLPEREAVVEQALEILQAR------LDEMGI 273

Query: 370 KTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVL 429
           K  I+   K  YSIY+ + + + SI+++  +  LR+I++                CY VL
Sbjct: 274 KNSIKGRAKHFYSIYEKMNRKKLSIDQLYDLLALRVIVEDVAQ------------CYSVL 321

Query: 430 GLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERG 489
           G+VH IW PIP    DYIA PK N YQSLHTT+   L  S   LEVQIRT  M   AE G
Sbjct: 322 GVVHTIWKPIPGQFDDYIANPKNNMYQSLHTTV---LGPSGEPLEVQIRTWAMHWRAEYG 378

Query: 490 IAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTS 549
           +AAH+                 R   G +   +  ++  ++ W+    E  +E      S
Sbjct: 379 VAAHW-----------------RYKEGDS---HVDDLDSKLEWIRRALEGSDE----TNS 414

Query: 550 REFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVS 609
            EF++ +  D+L S VFVFTP G++KNLP+G+TVVD+A+ +HT++G + V A VN  +V 
Sbjct: 415 EEFMERLKDDVLTSDVFVFTPEGDVKNLPRGSTVVDFAFSVHTQVGEQYVGAMVNNRIVP 474

Query: 610 PTHVLANAEVVEIIT 624
             + L N ++V+I+T
Sbjct: 475 ADYELHNGDIVKIMT 489


>gi|417837430|ref|ZP_12483668.1| GTP pyrophosphokinase , ppGpp synthetase I [Lactobacillus johnsonii
           pf01]
 gi|338760973|gb|EGP12242.1| GTP pyrophosphokinase , ppGpp synthetase I [Lactobacillus johnsonii
           pf01]
          Length = 749

 Score =  335 bits (859), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 196/485 (40%), Positives = 280/485 (57%), Gaps = 47/485 (9%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++   L  V  A   A +AH+GQ R SG+P+IIHP +VA  L  L LD +++AAG LHD
Sbjct: 19  YMNDEHLAFVESAYEFAKKAHEGQFRVSGQPYIIHPTQVAGTLATLRLDPDTVAAGYLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
           TVEDT  VT + I+E+FG  V  IV+G   V+KL K++ K+++H  ++  AD+ R+M +A
Sbjct: 79  TVEDT-PVTNDDIKEKFGKDVAFIVDG---VTKLSKIQYKSKSH--EEYLADNHRKMLIA 132

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M +++RVI+VKLADRLHNM TL H+ P KQ  IA ETL ++APLA  LG+  IK ELE++
Sbjct: 133 MAKDLRVIMVKLADRLHNMHTLDHLRPDKQRRIADETLDIYAPLADRLGIGTIKWELEDM 192

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           S  Y N + Y ++   +     E E  + +A   L       Q LD + +K EI    K 
Sbjct: 193 SLHYLNPQQYYRIVNLMQSKRSEREGYIADAISTLK------QTLDSLGIKYEIYGRPKH 246

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIYK ++      +E+  +  +R+I+K              + CY VLG VH  W P+
Sbjct: 247 IYSIYKKMVNKHKDFSEIYDLLAVRVIVK------------SVKDCYAVLGAVHTKWKPM 294

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK NGYQSLHTT+I         LE+QIRTE M  +AE G+AAH++ +  
Sbjct: 295 PGRFKDYIAVPKVNGYQSLHTTIIG---PGGKPLEIQIRTEAMHQVAEYGVAAHWAYKEG 351

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
           V G V     N                  +++    I E Q E      S EF+ ++  D
Sbjct: 352 VKGEVEQTDANK-----------------KLNMFQEILELQNE---TKDSHEFMKSVKTD 391

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           +   RV+VFTP+G++  LPKG+  +D+AYMIH+E+G   V A++NG +V   + L   ++
Sbjct: 392 IFSDRVYVFTPKGDVYELPKGSVPLDFAYMIHSEVGAHSVGARINGKIVPLDYKLKTGDI 451

Query: 620 VEIIT 624
           VE++T
Sbjct: 452 VEMLT 456


>gi|339445999|ref|YP_004712003.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
           [Eggerthella sp. YY7918]
 gi|338905751|dbj|BAK45602.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
           [Eggerthella sp. YY7918]
          Length = 791

 Score =  335 bits (859), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 204/514 (39%), Positives = 298/514 (57%), Gaps = 56/514 (10%)

Query: 116 SVSSDAFKEDSP-----ERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEP 170
           S +SDA K  S      ER  E  R T +YLS ++  L+ +A   A +AH GQ R+SGEP
Sbjct: 36  SFASDADKNTSSSQTPEERFAELQRLTSAYLSESDQALLEKAFRFASDAHAGQCRKSGEP 95

Query: 171 FIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKV 230
           F+ HPVEVA IL +L +D E++ A LLHDTVEDT+V T E +E EF   + ++VEG TK+
Sbjct: 96  FVAHPVEVAIILADLRMDVETLVASLLHDTVEDTSV-TREDVEREFSPEIAQLVEGVTKI 154

Query: 231 SKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQS 290
           +++       E  S+ D +A  +R+M +AM++++RVI++KLADRLHNMRTL  +   ++ 
Sbjct: 155 TRI-------EVESLSDEQAATIRKMLVAMSKDIRVIVIKLADRLHNMRTLGALREDRRI 207

Query: 291 SIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEA 350
             + ETL+++AP+A  LG+  IK ELE+LSF Y     + +V R V +   E E  L++ 
Sbjct: 208 FKSRETLEIYAPIAHRLGINNIKWELEDLSFFYLEPNKFKQVSRMVTESRAEREGYLDQI 267

Query: 351 NKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPK 410
            +IL  ++E       + ++ +I    K  YSIY+ + K     +E+  +  +RII+K  
Sbjct: 268 IEILHGEMEK------VGIQAQIMGRPKHLYSIYQKMTKKGKGFSEIYDLIAVRIIVK-- 319

Query: 411 PCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESM 470
                       + CY  LG VH +W P+P   KDYIA PK N YQSLHTT+I     + 
Sbjct: 320 ----------SVKDCYSALGAVHTLWHPMPGRFKDYIAMPKFNMYQSLHTTVIG---PAG 366

Query: 471 FRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRI 530
             LEVQIRTE+M   +E G+AAH+             R   +  +G         +  ++
Sbjct: 367 RPLEVQIRTEDMHRTSEYGVAAHW-------------RYKEKGGKG------GDELDQQL 407

Query: 531 SWLNAIREWQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMI 590
           +WL  + +WQ E      SREF+  +  DL  + V+VFTP+GE+ +L  G+T VD+AY I
Sbjct: 408 AWLRQMIDWQSE---TQDSREFLKDLKVDLAPTEVYVFTPKGEVMSLRAGSTPVDFAYAI 464

Query: 591 HTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
           HTE+GN  V AKVNG +V  T+ L   + V+I+T
Sbjct: 465 HTEVGNHCVGAKVNGAIVPLTYELQLGDRVDILT 498


>gi|322373769|ref|ZP_08048304.1| GTP pyrophosphokinase [Streptococcus sp. C150]
 gi|321277141|gb|EFX54211.1| GTP pyrophosphokinase [Streptococcus sp. C150]
          Length = 739

 Score =  335 bits (859), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 188/492 (38%), Positives = 292/492 (59%), Gaps = 49/492 (9%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           +Y+S ++L+LV +A   A EAH+GQ R+SGEP+IIHP++VA IL +L LD  ++A G LH
Sbjct: 18  AYMSADDLKLVEKAWHYATEAHNGQFRQSGEPYIIHPIQVAGILADLHLDAVTVACGFLH 77

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT   T + +E +FG  VR IV+G   V+KLGK++ K+    +    A++ R+M +
Sbjct: 78  DVVEDTEK-TLDDLEADFGLDVRNIVDG---VTKLGKVEYKSHEEQL----AENHRKMLM 129

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM++++RVI+VKLADRLHNMRTL H+   KQ  I+ ET++++APLA  LG+ +IK ELE+
Sbjct: 130 AMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELED 189

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
           ++F Y N  ++ K    ++ + KE  +E EE    ++ KI+   +     +  +I    K
Sbjct: 190 MAFRYLNEVEFYK----ISHMMKEKRREREELVDDIVAKIK--TYTSEQGLVGDIYGRPK 243

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIY+ +   +   +++  +  +R +++                 Y +LG +H +W P
Sbjct: 244 HIYSIYRKMRDKKKRFDQIYDLIAIRCVME------------THSDVYAMLGYIHELWRP 291

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PK NGYQS+HTT    +Y     +E+QIRT+EM  +AE G+AAH++ + 
Sbjct: 292 MPGRFKDYIANPKSNGYQSIHTT----VYGPKGPIEIQIRTKEMHQVAEYGVAAHWAYKK 347

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
            + G V                 ++   AL ++W+  + E Q+   G+     FVD++  
Sbjct: 348 GIKGKV-----------------DSKESALGMNWIKDLVELQDASNGDAMG--FVDSVKE 388

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           D+   R++VFTP G ++ LPK +  +D+AY IHT++G K   AKVNG +V  T  L   +
Sbjct: 389 DIFSERIYVFTPNGAVQELPKDSGPIDFAYAIHTQVGEKATGAKVNGRMVPLTAKLKTGD 448

Query: 619 VVEIITYNVSFS 630
           VVEI+T   SF 
Sbjct: 449 VVEIVTNANSFG 460


>gi|417647325|ref|ZP_12297167.1| GTP diphosphokinase [Staphylococcus epidermidis VCU144]
 gi|329724679|gb|EGG61185.1| GTP diphosphokinase [Staphylococcus epidermidis VCU144]
          Length = 729

 Score =  335 bits (859), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 192/491 (39%), Positives = 291/491 (59%), Gaps = 49/491 (9%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           SYLS +E E V ++  +A+EAH GQ R++G P+I+HP++VA IL E+ LD  +I AG LH
Sbjct: 18  SYLSTSEYEYVLKSYYIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPTIVAGFLH 77

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D +EDT+  TFE +++ F   + RIV+G TK+ K+ K + K E       +A++ R++F+
Sbjct: 78  DVIEDTSY-TFEDVKDMFNEEIARIVDGVTKLKKV-KYRSKEEQ------QAENHRKLFI 129

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           A+ ++VRVI+VKLADRLHNMRTL  MP  KQ  I+ ETL+++APLA  LG+  IK ELE+
Sbjct: 130 AIAKDVRVILVKLADRLHNMRTLKAMPREKQVRISKETLEIYAPLAHRLGINTIKWELED 189

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
            +  Y ++  Y     R+ +L K+   E E      + KI+++  +  M +  EI    K
Sbjct: 190 TALRYIDSVQYF----RIVNLMKKKRSEREAYITNAINKIKNE--MTKMNLSGEINGRPK 243

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIY+ ++K +   +++  +  +RII+            +    CY  LGLVH +W P
Sbjct: 244 HIYSIYRKMIKQKKQFDQIFDLLAIRIIV------------NSINDCYATLGLVHTLWKP 291

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PK N YQSLHTT++     +   LE+QIRT EM  IAE G+AAH++ + 
Sbjct: 292 MPGRFKDYIAMPKQNMYQSLHTTVVG---PNGDPLEIQIRTHEMHEIAEHGVAAHWAYK- 347

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                            GKTV     +   +++WL   +E  E    +  ++EF++++  
Sbjct: 348 ----------------EGKTVNQKTQDFQNKLNWL---KELAETDHTSADAQEFMESLKY 388

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           DL   +V+ FTP  ++  LP GA  +D+AY IH+E+GNKM+ AKVNG +V   +VL   +
Sbjct: 389 DLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPIDYVLQTGD 448

Query: 619 VVEIITYNVSF 629
           ++EI T   S+
Sbjct: 449 IIEIRTSKHSY 459


>gi|77414296|ref|ZP_00790454.1| GTP pyrophosphokinase family protein [Streptococcus agalactiae 515]
 gi|77159641|gb|EAO70794.1| GTP pyrophosphokinase family protein [Streptococcus agalactiae 515]
          Length = 738

 Score =  335 bits (859), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 190/494 (38%), Positives = 293/494 (59%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  Y+S  ++  V+ AL  A  AH  Q R+SGEP+IIHP++VA IL +L LD  ++A G 
Sbjct: 16  TSQYMSETDVAFVKFALNYATAAHYYQARKSGEPYIIHPIQVAGILADLHLDAVTVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT + T + IE +FG  VR I++G   V+KLGK++ K+    +    A++ R+M
Sbjct: 76  LHDVVEDTEI-TLDEIETDFGKDVRDIIDG---VTKLGKVEYKSHEEQL----AENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM++++RVI+VKLADRLHNMRTL H+   KQ  I+ ET++++APLA  LG+ +IK EL
Sbjct: 128 LMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y N  ++ K    ++ +  E  +E EE   I++ KI    + +   +  +I   
Sbjct: 188 EDLSFRYLNETEFYK----ISHMMSEKRREREELVDIIVDKIR--SYTEEQGLYGDIYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSIY+ +   +   +++  +  +R I+  +  S V          Y ++G +H +W
Sbjct: 242 PKHIYSIYRKMRDKKKRFDQIYDLIAIRCIM--ETASDV----------YAMVGYIHELW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA PK NGYQS+HTT    +Y     +E+QIRT+EM  +AE G+AAH++ 
Sbjct: 290 RPMPGRFKDYIAAPKANGYQSIHTT----VYGXKGPIEIQIRTKEMHQVAEFGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +                 +G T  +N A  ++ + W+  + E Q+E   +  +++FVD++
Sbjct: 346 K-----------------KGITSKVNQAEQSVGMGWIQELVELQDE---SKDAKDFVDSV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             D+   R++VFTP G ++ LP+ +  +D+AY IHT++G K   AKVNG +V  T  L  
Sbjct: 386 KEDIFTERIYVFTPNGAVQELPRESGPIDFAYAIHTQVGEKATGAKVNGRMVPLTAKLKT 445

Query: 617 AEVVEIITYNVSFS 630
            +VVEIIT   SF 
Sbjct: 446 GDVVEIITNPNSFG 459


>gi|420187166|ref|ZP_14693188.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM039]
 gi|394256604|gb|EJE01533.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM039]
          Length = 729

 Score =  335 bits (859), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 192/491 (39%), Positives = 291/491 (59%), Gaps = 49/491 (9%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           SYLS +E E V ++  +A+EAH GQ R++G P+I+HP++VA IL E+ LD  +I AG LH
Sbjct: 18  SYLSTSEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPTIVAGFLH 77

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D +EDT+  TFE +++ F   + RIV+G TK+ K+ K + K E       +A++ R++F+
Sbjct: 78  DVIEDTSY-TFEDVKDMFNEEIARIVDGVTKLKKV-KYRSKEEQ------QAENHRKLFI 129

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           A+ ++VRVI+VKLADRLHNMRTL  MP  KQ  I+ ETL+++APLA  LG+  IK ELE+
Sbjct: 130 AIAKDVRVILVKLADRLHNMRTLKAMPREKQVRISKETLEIYAPLAHRLGINTIKWELED 189

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
            +  Y ++  Y     R+ +L K+   E E      + KI+++  +  M +  EI    K
Sbjct: 190 TALRYIDSVQYF----RIVNLMKKKRSEREAYITNAINKIKNE--MTKMNLSGEINGRPK 243

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIY+ ++K +   +++  +  +RII+            +    CY  LGLVH +W P
Sbjct: 244 HIYSIYRKMIKQKKQFDQIFDLLAIRIIV------------NSINDCYATLGLVHTLWKP 291

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PK N YQSLHTT++     +   LE+QIRT EM  IAE G+AAH++ + 
Sbjct: 292 MPGRFKDYIAMPKQNMYQSLHTTVVG---PNGDPLEIQIRTHEMHKIAEHGVAAHWAYK- 347

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                            GKTV     +   +++WL   +E  E    +  ++EF++++  
Sbjct: 348 ----------------EGKTVNQKTQDFQNKLNWL---KELAETDHTSADAQEFMESLKY 388

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           DL   +V+ FTP  ++  LP GA  +D+AY IH+E+GNKM+ AKVNG +V   +VL   +
Sbjct: 389 DLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPIDYVLQTGD 448

Query: 619 VVEIITYNVSF 629
           ++EI T   S+
Sbjct: 449 IIEIRTSKHSY 459


>gi|160893486|ref|ZP_02074271.1| hypothetical protein CLOL250_01037 [Clostridium sp. L2-50]
 gi|156864881|gb|EDO58312.1| RelA/SpoT family protein [Clostridium sp. L2-50]
          Length = 777

 Score =  335 bits (859), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 204/506 (40%), Positives = 291/506 (57%), Gaps = 62/506 (12%)

Query: 127 PERLWEDL-RPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGEL 185
           PE L+++L +  ++Y    ++ ++ +A  +A +AH+GQ R+SGEP+I+HP+ VA IL EL
Sbjct: 46  PEDLYKELIKKILTYHPSTDISMIEKAYKVASKAHEGQLRKSGEPYIMHPLCVAIILAEL 105

Query: 186 ELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSV 245
           ELD E+I AG+LHD VEDT V+T E I  EF   V  +VEG   V+KL +LK   +   V
Sbjct: 106 ELDKETIVAGILHDVVEDT-VMTSEEIAAEFSEEVAFLVEG---VTKLTQLKMTTDKIEV 161

Query: 246 QDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAK 305
           Q   A++LR+MFL+M +++RVI++KLADRLHN+RTL +  P KQ   A ET+ ++AP+A 
Sbjct: 162 Q---AENLRKMFLSMAKDIRVILIKLADRLHNLRTLQYQSPAKQVEKARETMDIYAPIAH 218

Query: 306 LLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDD--QF 363
            LG+ +IK EL++LS  Y   E Y  +  ++    + HE+E        +K+I  D  + 
Sbjct: 219 RLGISKIKVELDDLSMKYLMPEVYKDLTAQID--ARMHEREA------YIKRIVADVKKH 270

Query: 364 LDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQ 423
           +D   +  EI    K  +SIYK +     +++++  I  +RI ++              +
Sbjct: 271 IDNAHLDAEIDGRVKHLFSIYKKMKNQNKTLDQIYDIFAVRIKVE------------TVR 318

Query: 424 ICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIR 478
            CY  LG++H ++ PIP   KDYIA PK N YQSLHTTLI     PF        E+QIR
Sbjct: 319 DCYSALGIIHEMYKPIPGRFKDYIAMPKSNMYQSLHTTLIGPEGQPF--------EIQIR 370

Query: 479 TEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIRE 538
           T EM   AE GIAAH+  +  +TG V                        ++SWL  I E
Sbjct: 371 TFEMHRTAEYGIAAHWKYKENITGTVMQKEEE------------------KLSWLRQILE 412

Query: 539 WQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKM 598
           WQ +   N     FV T   DL   +V+ FTP G++KNLP G+T +D+AY IHT +GNKM
Sbjct: 413 WQRDTSDNKEFMNFVKT-DLDLFAEQVYCFTPAGDVKNLPSGSTPIDFAYAIHTAVGNKM 471

Query: 599 VAAKVNGNLVSPTHVLANAEVVEIIT 624
           V A++NG  V     L N + VEIIT
Sbjct: 472 VGARINGRQVPIDTKLNNGDRVEIIT 497


>gi|387762136|ref|YP_006069113.1| GTP pyrophosphokinase [Streptococcus salivarius 57.I]
 gi|339292903|gb|AEJ54250.1| GTP pyrophosphokinase [Streptococcus salivarius 57.I]
          Length = 739

 Score =  335 bits (859), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 187/492 (38%), Positives = 291/492 (59%), Gaps = 49/492 (9%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           +Y+S ++L+LV +A   A +AH GQ R+SGEP+IIHP++VA IL +L LD  ++A G LH
Sbjct: 18  AYMSADDLKLVEKAWHYATDAHSGQSRQSGEPYIIHPIQVAGILADLHLDAVTVACGFLH 77

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT   T + +E +FG  VR IV+G   V+KLGK++ K+    +    A++ R+M +
Sbjct: 78  DVVEDTEK-TLDDLEADFGTDVRNIVDG---VTKLGKVEYKSHEEQL----AENHRKMLM 129

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM++++RVI+VKLADRLHNMRTL H+   KQ  I+ ET++++APLA  LG+ +IK ELE+
Sbjct: 130 AMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELED 189

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
           +SF Y N  ++ K    ++ + KE  +E EE    ++ KI+   +     +  ++    K
Sbjct: 190 MSFRYLNEVEFYK----ISHMMKEKRREREELVDEIVDKIK--TYTAEQGLVGDVYGRPK 243

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIY+ +   +   +++  +  +R +++                 Y +LG +H +W P
Sbjct: 244 HIYSIYRKMRDKKKRFDQIYDLIAIRCVME------------THSDVYAMLGYIHELWRP 291

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PK NGYQS+HTT    +Y     +E+QIRT+EM  +AE G+AAH++ + 
Sbjct: 292 MPGRFKDYIANPKSNGYQSIHTT----VYGPKGPIEIQIRTKEMHQVAEYGVAAHWAYKK 347

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
            + G V                 ++   AL ++W+  + E Q+   G+     FVD++  
Sbjct: 348 GIKGKV-----------------DSKESALGMNWIKDLVELQDASNGDAMG--FVDSVKE 388

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           D+   R++VFTP G ++ LPK +  +D+AY IHT++G K   AKVNG +V  T  L   +
Sbjct: 389 DIFSERIYVFTPNGAVQELPKDSGPIDFAYAIHTQVGEKATGAKVNGRMVPLTAKLKTGD 448

Query: 619 VVEIITYNVSFS 630
           VVEI+T   SF 
Sbjct: 449 VVEIVTNANSFG 460


>gi|294101598|ref|YP_003553456.1| (p)ppGpp synthetase I SpoT/RelA [Aminobacterium colombiense DSM
           12261]
 gi|293616578|gb|ADE56732.1| (p)ppGpp synthetase I, SpoT/RelA [Aminobacterium colombiense DSM
           12261]
          Length = 734

 Score =  335 bits (859), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 191/495 (38%), Positives = 301/495 (60%), Gaps = 54/495 (10%)

Query: 131 WEDLRPTISY-LSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDW 189
           W +L   ++Y L+  EL+ +  A ++A +AH  QKR SG+P+++H + VA IL +++LD 
Sbjct: 22  WHELWSKVTYYLTKEELKKLGEAFVMAADAHGEQKRSSGDPYVVHSINVASILADMQLDL 81

Query: 190 ESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVK 249
            ++ A LLHD +EDT  ++ E+++  FG  V  +V+G   V+KLGKL  K    S +D +
Sbjct: 82  VTLIAALLHDVLEDT-ALSAEKVKSAFGDDVITLVDG---VTKLGKLPFK----SFEDYQ 133

Query: 250 ADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGM 309
           A++LR+MF+ M +++RV+++KLADRLHNMRTL  +   KQ  IA ETL+++APLA  LG+
Sbjct: 134 AENLRKMFVVMAKDIRVVLIKLADRLHNMRTLGALRRDKQLRIAKETLEIYAPLAHRLGI 193

Query: 310 YQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTV 369
           YQ+K  LE+L+F Y++ + Y +++RRV     E E  +++A +IL  +++ +      ++
Sbjct: 194 YQVKRGLEDLAFKYSDPDMYYEIRRRVRKKLPEREAIIKKAIEILQDRLKQE------SI 247

Query: 370 KTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVL 429
             +++   K  YSIY+ + + +  + ++  +  LR+++                 CY VL
Sbjct: 248 HFKVKGRAKHFYSIYEKMNRKKLPVEQLYDLLALRVVVDDVAA------------CYTVL 295

Query: 430 GLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERG 489
           G+VH IW PIP    DYIA PK N YQSLHTT++    E    LEVQIR+ EM+ +AE G
Sbjct: 296 GIVHTIWKPIPGQFDDYIANPKTNMYQSLHTTVVGPTGEP---LEVQIRSAEMNRLAEYG 352

Query: 490 IAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTS 549
           IAAH+                 R   G  V     ++  R++W+    E   E  G  T 
Sbjct: 353 IAAHW-----------------RYKEGGNVL---DDLDARLTWIRQALEGDHE--GGPT- 389

Query: 550 REFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVS 609
            EF++ +  D+L S VFVFTP+G++ +LPKG+T +D+AY IHT++GN+ V A VN  +VS
Sbjct: 390 -EFLERLKEDVLTSDVFVFTPQGKVVSLPKGSTPIDFAYAIHTQVGNRCVGAMVNNRIVS 448

Query: 610 PTHVLANAEVVEIIT 624
            T+ + N ++V+IIT
Sbjct: 449 LTYEVKNGDIVKIIT 463


>gi|379795989|ref|YP_005325987.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus
           MSHR1132]
 gi|356872979|emb|CCE59318.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus
           MSHR1132]
          Length = 736

 Score =  335 bits (859), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 194/498 (38%), Positives = 293/498 (58%), Gaps = 49/498 (9%)

Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
           E L    SYLS +E E V ++  +A+EAH GQ R++G P+I+HP++VA IL E+ LD  +
Sbjct: 18  EVLHKAKSYLSSDEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPT 77

Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
           I AG LHD +EDT   TFE ++E F   V RIV+G TK+ K+ K + K E       +A+
Sbjct: 78  IVAGFLHDVIEDTPY-TFEDVKEMFNEEVARIVDGVTKLKKV-KYRSKEEQ------QAE 129

Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
           + R++F+A+ ++VRVI+VKLADRLHNMRTL  MP  KQ  I+ ETL+++APLA  LG+  
Sbjct: 130 NHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIYAPLAHRLGINT 189

Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
           IK ELE+ +  Y +   Y     R+ +L K+   E E   +  + +I  +  +D M ++ 
Sbjct: 190 IKWELEDTALRYIDNVQYF----RIVNLMKKKRSEREAYIETAIDRIRTE--MDRMNIEG 243

Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
           +I    K  YSIY+ ++K +   +++  +  +R+I+            +    CY +LGL
Sbjct: 244 DINGRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV------------NSINDCYAILGL 291

Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
           VH +W P+P   KDYIA PK N YQSLHTT++     +   LE+QIRT +M  IAE G+A
Sbjct: 292 VHTLWKPMPGRFKDYIAMPKQNMYQSLHTTVVG---PNGDPLEIQIRTFDMHEIAEHGVA 348

Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
           AH++ +                  GK V   + N   +++WL   +E  E    +  ++E
Sbjct: 349 AHWAYK-----------------EGKKVNEKDQNYQNKLNWL---KELAEADHTSSDAQE 388

Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
           F++T+  DL   +V+ FTP  ++  LP GA  +D+AY IH+E+GNKM+ AKVNG +V   
Sbjct: 389 FMETLKYDLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPID 448

Query: 612 HVLANAEVVEIITYNVSF 629
           ++L   ++VEI T   S+
Sbjct: 449 YILQTGDIVEIRTSKHSY 466


>gi|42519264|ref|NP_965194.1| GTP pyrophosphokinase [Lactobacillus johnsonii NCC 533]
 gi|385825782|ref|YP_005862124.1| GTP pyrophosphokinase [Lactobacillus johnsonii DPC 6026]
 gi|41583552|gb|AAS09160.1| GTP pyrophosphokinase [Lactobacillus johnsonii NCC 533]
 gi|329667226|gb|AEB93174.1| GTP pyrophosphokinase [Lactobacillus johnsonii DPC 6026]
          Length = 749

 Score =  335 bits (859), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 196/485 (40%), Positives = 280/485 (57%), Gaps = 47/485 (9%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++   L  V  A   A +AH+GQ R SG+P+IIHP +VA  L  L LD +++AAG LHD
Sbjct: 19  YMNDEHLAFVESAYEFAKKAHEGQFRVSGQPYIIHPTQVAGTLATLRLDPDTVAAGYLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
           TVEDT  VT + I+E+FG  V  IV+G   V+KL K++ K+++H  ++  AD+ R+M +A
Sbjct: 79  TVEDT-PVTNDDIKEKFGKDVAFIVDG---VTKLSKIQYKSKSH--EEYLADNHRKMLIA 132

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M +++RVI+VKLADRLHNM TL H+ P KQ  IA ETL ++APLA  LG+  IK ELE++
Sbjct: 133 MAKDLRVIMVKLADRLHNMHTLDHLRPDKQRRIADETLDIYAPLADRLGIGTIKWELEDM 192

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           S  Y N + Y ++   +     E E  + +A   L       Q LD + +K EI    K 
Sbjct: 193 SLHYLNPQQYYRIVNLMQSKRSEREGYIADAISTLK------QTLDSLGIKYEIYGRPKH 246

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIYK ++      +E+  +  +R+I+K              + CY VLG VH  W P+
Sbjct: 247 IYSIYKKMVNKHKDFSEIYDLLAVRVIVK------------SVKDCYAVLGAVHTKWKPM 294

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK NGYQSLHTT+I         LE+QIRTE M  +AE G+AAH++ +  
Sbjct: 295 PGRFKDYIAVPKVNGYQSLHTTIIG---PGGKPLEIQIRTEAMHQVAEYGVAAHWAYKEG 351

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
           V G V     N                  +++    I E Q E      S EF+ ++  D
Sbjct: 352 VKGEVEQTDANK-----------------KLNMFQEILELQNE---TKDSHEFMKSVKTD 391

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           +   RV+VFTP+G++  LPKG+  +D+AYMIH+E+G   V A++NG +V   + L   ++
Sbjct: 392 IFSDRVYVFTPKGDVYELPKGSVPLDFAYMIHSEVGAHSVGARINGKIVPLDYKLKTGDI 451

Query: 620 VEIIT 624
           VE++T
Sbjct: 452 VEMLT 456


>gi|358051528|ref|ZP_09145719.1| GTP pyrophosphokinase [Staphylococcus simiae CCM 7213]
 gi|357258969|gb|EHJ08835.1| GTP pyrophosphokinase [Staphylococcus simiae CCM 7213]
          Length = 729

 Score =  335 bits (859), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 197/498 (39%), Positives = 294/498 (59%), Gaps = 49/498 (9%)

Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
           E L    SYLS +E E V ++  +A+EAH GQ R++G P+I+HP++VA IL E+ LD  +
Sbjct: 11  EVLHKAKSYLSAHEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPT 70

Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
           I AG LHD +EDT   TFE ++E F   V RIV+G TK+ K+ K + K E       +A+
Sbjct: 71  IVAGFLHDVIEDTPY-TFEDVKEMFNEEVARIVDGVTKLKKV-KYRSKEEQ------QAE 122

Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
           + R++F+A+ ++VRVI+VKLADRLHNMRTL  MP  KQ  I+ ETL+++APLA  LG+  
Sbjct: 123 NHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPRDKQIRISRETLEIYAPLAHRLGINT 182

Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
           IK ELE+ +  Y +   Y     R+ +L K+   E EE  +  + KI  +  ++ M +  
Sbjct: 183 IKWELEDTALRYIDNVQYF----RIVNLMKKKRSEREEYIEKAIDKISTE--MERMQIAG 236

Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
           EI    K  YSIY+ ++K +   +++  +  +R+I+            +    CY VLGL
Sbjct: 237 EINGRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV------------NSINDCYAVLGL 284

Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
           VH +W P+P   KDYIA PK N YQSLHTT++     +   LE+QIRT +M  IAE G+A
Sbjct: 285 VHTLWKPMPGRFKDYIAMPKQNMYQSLHTTVVG---PNGDPLEIQIRTFDMHEIAEHGVA 341

Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
           AH++ +                  GKTV   + +   +++WL   +E  E    +  ++E
Sbjct: 342 AHWAYK-----------------EGKTVNEKDQSYQNKLNWL---KELAEADHTSSDAQE 381

Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
           F++T+  DL   +V+ FTP  ++  LP GA  +D+AY IH+E+GNKM+ AKVNG +V   
Sbjct: 382 FMETLKYDLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPID 441

Query: 612 HVLANAEVVEIITYNVSF 629
           ++L   ++VEI T   S+
Sbjct: 442 YMLQTGDIVEIRTSKHSY 459


>gi|449886441|ref|ZP_21786190.1| putative stringent response protein [Streptococcus mutans SA41]
 gi|449254205|gb|EMC52125.1| putative stringent response protein [Streptococcus mutans SA41]
          Length = 740

 Score =  335 bits (859), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 189/491 (38%), Positives = 288/491 (58%), Gaps = 49/491 (9%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++  ++  V++AL  A E H GQ R+SGEP+IIHP++VA IL +L LD  +++ G LHD
Sbjct: 19  YMNKADITFVQKALDYATECHSGQFRKSGEPYIIHPIQVAGILADLHLDAITVSCGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            +EDT   T + +E +FG+ V+ IV+G   V+KLGK++ K+    +    A++ R+M +A
Sbjct: 79  VIEDTEA-TLDHLEAKFGSDVKNIVDG---VTKLGKVEYKSHEEQL----AENHRKMLMA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M++++RVI+VKLADRLHNMRTL H+   KQ  I+ ET++++APLA  LG+ +IK ELE+L
Sbjct: 131 MSKDIRVILVKLADRLHNMRTLRHLRKDKQERISRETMEIYAPLAHRLGISRIKWELEDL 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           +F Y N  ++ K    ++ L  E  +E E     ++ KI+   +     +  EI    K 
Sbjct: 191 AFRYLNEVEFYK----ISHLMNEKRREREALVDDIVDKIK--AYTAEQGLHGEIYGRPKH 244

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIY+ +   +   +++  +  +R I+              Q   Y +LG +H +W P+
Sbjct: 245 IYSIYRKMRDKKKRFDQIYDLIAIRCIL------------DTQSDVYAMLGYIHELWRPM 292

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK NGYQS+HTT    +Y     +EVQIRT EM  +AE G+AAH++ +  
Sbjct: 293 PGRFKDYIANPKANGYQSIHTT----VYGPKGPIEVQIRTHEMHQVAEYGVAAHWAYKKG 348

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
           + G V                 N+   AL ++W+  + E Q+   GN    +FVD++  D
Sbjct: 349 IKGKV-----------------NSQESALGMNWIKELVELQDASNGNAV--DFVDSVKED 389

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           +   R++VFTP G ++ LPK +  +D+AY IHT++G K   AKVNG +V  T  L   +V
Sbjct: 390 IFAERIYVFTPNGAVQELPKDSGPIDFAYAIHTQVGEKATGAKVNGRMVPLTTKLKTGDV 449

Query: 620 VEIITYNVSFS 630
           VEIIT + SF 
Sbjct: 450 VEIITNSNSFG 460


>gi|339629624|ref|YP_004721267.1| GTP pyrophosphokinase [Sulfobacillus acidophilus TPY]
 gi|379007260|ref|YP_005256711.1| (p)ppGpp synthetase I SpoT/RelA [Sulfobacillus acidophilus DSM
           10332]
 gi|339287413|gb|AEJ41524.1| GTP pyrophosphokinase [Sulfobacillus acidophilus TPY]
 gi|361053522|gb|AEW05039.1| (p)ppGpp synthetase I, SpoT/RelA [Sulfobacillus acidophilus DSM
           10332]
          Length = 719

 Score =  335 bits (858), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 195/479 (40%), Positives = 284/479 (59%), Gaps = 51/479 (10%)

Query: 145 ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDT 204
           E + + RA+  A EAH GQ R SGEP+I HP+ VA IL +L++D  +I A LLHD VEDT
Sbjct: 18  EADQIIRAIEFADEAHRGQSRASGEPYIAHPLAVAGILADLKMDTPTIVAALLHDVVEDT 77

Query: 205 NVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEV 264
              T   IE  FG  V ++V+G TK+ +L       E  + ++ +A++LR+MFLAM +++
Sbjct: 78  -AYTLADIESRFGTEVAQLVDGVTKLDRL-------EVRTQEEEQAENLRKMFLAMAKDI 129

Query: 265 RVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYT 324
           RVI++KLADRLHNMRTL H+P  + + IA ET++++APLA  LG+++IK ELE+L+F Y 
Sbjct: 130 RVILIKLADRLHNMRTLKHLPQDRVTRIAKETMEIYAPLAHRLGIFRIKWELEDLAFQYL 189

Query: 325 NAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIY 384
               Y ++K  VA    +  +E E A   ++++++D   LD   + +E+    K  YSIY
Sbjct: 190 QPAAYQEMKELVA----KKRQEREAAVDAVIQELKDR--LDASGMVSEVSGRAKHLYSIY 243

Query: 385 KAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMK 444
           + + K      ++  +  +R++++              + CY VLGLVH +W P+P   K
Sbjct: 244 QKMHKQGKDFGQIYDLVAVRVLVESV------------KDCYAVLGLVHSLWKPVPGRFK 291

Query: 445 DYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLV 504
           DYIA PK N YQSLHTT+I    E    LEVQIRT EM   AE GIAAH+          
Sbjct: 292 DYIAMPKSNLYQSLHTTVIGPHGEP---LEVQIRTFEMHHTAEYGIAAHW---------- 338

Query: 505 GHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSR 564
                  R   G +    + +   ++SWL  + EWQ +      + EF++T+  DL    
Sbjct: 339 -------RYKEGSSKA--DRDFEQKLSWLRQLLEWQRDM---RDAAEFMETLKVDLFSDE 386

Query: 565 VFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEII 623
           VFVFTP+G++ +LP GAT VD+AY IHT+IG+  V AKVNG +V     L + ++VEI+
Sbjct: 387 VFVFTPKGDVIDLPAGATPVDFAYRIHTDIGHHCVGAKVNGRIVPLATPLESGDIVEIL 445


>gi|319945699|ref|ZP_08019950.1| GTP diphosphokinase [Streptococcus australis ATCC 700641]
 gi|417919041|ref|ZP_12562582.1| RelA/SpoT family protein [Streptococcus australis ATCC 700641]
 gi|319748059|gb|EFW00302.1| GTP diphosphokinase [Streptococcus australis ATCC 700641]
 gi|342834628|gb|EGU68892.1| RelA/SpoT family protein [Streptococcus australis ATCC 700641]
          Length = 739

 Score =  335 bits (858), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 194/494 (39%), Positives = 293/494 (59%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YLS  ++  V +AL+ A + H GQ R+SGEP+IIHP++VA IL +L+LD  ++A G 
Sbjct: 16  TKKYLSGEDVAFVEKALLYAVDCHSGQFRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT+  T + +E EFG  VR IV+G   V+KLGK+K K+    +    A++ R+M
Sbjct: 76  LHDVVEDTDA-TLDDLEREFGHDVRVIVDG---VTKLGKVKYKSHEEQL----AENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM++++RVI+VKLADRLHNMRTL H+   KQ  I+ ET++++APLA  LG+  +K EL
Sbjct: 128 LMAMSQDIRVILVKLADRLHNMRTLKHLRKDKQERISQETMEIYAPLAHRLGISSVKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y N  ++ K+   + +  +E E  +EE    +++KIE   +     +  +I   
Sbjct: 188 EDLSFRYLNEVEFYKISHMMKEKRREREALVEE----VVQKIE--SYAAERHLYGKIYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSIY+ +   +   +E+  +  +R I++           SP  + Y +LG +H +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFDEIYDLIAIRCILE-----------SPSDV-YAMLGYIHELW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA  K NGYQS+HTT    +Y     +E QIRT+EM  +AE G+AAH++ 
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  + G V                 N+   A+ ++W+  + E Q++      ++EFVDT+
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDTV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             + L   ++VFTP G +++LPK +  +D+AY IHT+IG K   AKVNG +V  T  L  
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKIGEKATGAKVNGRMVPLTTKLKT 445

Query: 617 AEVVEIITYNVSFS 630
            + VEIIT   SF 
Sbjct: 446 GDQVEIITNPNSFG 459


>gi|227890126|ref|ZP_04007931.1| GTP diphosphokinase [Lactobacillus johnsonii ATCC 33200]
 gi|227849301|gb|EEJ59387.1| GTP diphosphokinase [Lactobacillus johnsonii ATCC 33200]
          Length = 749

 Score =  335 bits (858), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 196/485 (40%), Positives = 280/485 (57%), Gaps = 47/485 (9%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++   L  V  A   A +AH+GQ R SG+P+IIHP +VA  L  L LD +++AAG LHD
Sbjct: 19  YMNDEHLAFVESAYEFAKKAHEGQFRVSGQPYIIHPTQVAGTLATLRLDPDTVAAGYLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
           TVEDT  VT + I+E+FG  V  IV+G   V+KL K++ K+++H  ++  AD+ R+M +A
Sbjct: 79  TVEDT-PVTNDDIKEKFGKDVAFIVDG---VTKLSKIQYKSKSH--EEYLADNHRKMLIA 132

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M +++RVI+VKLADRLHNM TL H+ P KQ  IA ETL ++APLA  LG+  IK ELE++
Sbjct: 133 MAKDLRVIMVKLADRLHNMHTLDHLRPDKQRRIADETLDIYAPLADRLGIGTIKWELEDM 192

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           S  Y N + Y ++   +     E E  + +A   L       Q LD + +K EI    K 
Sbjct: 193 SLHYLNPQQYYRIVNLMQSKRSEREGYIADAISTLK------QTLDSLGIKYEIYGRPKH 246

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIYK ++      +E+  +  +R+I+K              + CY VLG VH  W P+
Sbjct: 247 IYSIYKKMVNKHKDFSEIYDLLAVRVIVK------------SVKDCYAVLGAVHTKWKPM 294

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK NGYQSLHTT+I         LE+QIRTE M  +AE G+AAH++ +  
Sbjct: 295 PGRFKDYIAVPKVNGYQSLHTTIIG---PGGKPLEIQIRTEAMHQVAEYGVAAHWAYKEG 351

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
           V G V     N                  +++    I E Q E      S EF+ ++  D
Sbjct: 352 VKGEVEQTDANK-----------------KLNMFQEILELQNEI---KDSHEFMKSVKTD 391

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           +   RV+VFTP+G++  LPKG+  +D+AYMIH+E+G   V A++NG +V   + L   ++
Sbjct: 392 IFSDRVYVFTPKGDVYELPKGSGPLDFAYMIHSEVGAHSVGARINGKIVPLDYKLKTGDI 451

Query: 620 VEIIT 624
           VE++T
Sbjct: 452 VEMLT 456


>gi|27468233|ref|NP_764870.1| GTP pyrophosphokinase [Staphylococcus epidermidis ATCC 12228]
 gi|57867129|ref|YP_188772.1| GTP pyrophosphokinase [Staphylococcus epidermidis RP62A]
 gi|242242906|ref|ZP_04797351.1| GTP pyrophosphokinase [Staphylococcus epidermidis W23144]
 gi|251811038|ref|ZP_04825511.1| GTP pyrophosphokinase [Staphylococcus epidermidis BCM-HMP0060]
 gi|282875942|ref|ZP_06284809.1| GTP diphosphokinase [Staphylococcus epidermidis SK135]
 gi|293366410|ref|ZP_06613088.1| GTP diphosphokinase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|417655951|ref|ZP_12305642.1| GTP diphosphokinase [Staphylococcus epidermidis VCU028]
 gi|417659668|ref|ZP_12309268.1| GTP diphosphokinase [Staphylococcus epidermidis VCU045]
 gi|417908499|ref|ZP_12552256.1| GTP diphosphokinase [Staphylococcus epidermidis VCU037]
 gi|417911252|ref|ZP_12554959.1| GTP diphosphokinase [Staphylococcus epidermidis VCU105]
 gi|417912614|ref|ZP_12556303.1| GTP diphosphokinase [Staphylococcus epidermidis VCU109]
 gi|418327807|ref|ZP_12938944.1| GTP diphosphokinase [Staphylococcus epidermidis 14.1.R1.SE]
 gi|418603642|ref|ZP_13167024.1| GTP diphosphokinase [Staphylococcus epidermidis VCU041]
 gi|418609265|ref|ZP_13172424.1| GTP diphosphokinase [Staphylococcus epidermidis VCU065]
 gi|418611758|ref|ZP_13174827.1| GTP diphosphokinase [Staphylococcus epidermidis VCU117]
 gi|418615702|ref|ZP_13178641.1| GTP diphosphokinase [Staphylococcus epidermidis VCU118]
 gi|418616388|ref|ZP_13179313.1| GTP diphosphokinase [Staphylococcus epidermidis VCU120]
 gi|418623420|ref|ZP_13186131.1| GTP diphosphokinase [Staphylococcus epidermidis VCU125]
 gi|418626110|ref|ZP_13188736.1| GTP diphosphokinase [Staphylococcus epidermidis VCU126]
 gi|418628145|ref|ZP_13190702.1| GTP diphosphokinase [Staphylococcus epidermidis VCU127]
 gi|418630931|ref|ZP_13193403.1| GTP diphosphokinase [Staphylococcus epidermidis VCU128]
 gi|418633468|ref|ZP_13195881.1| GTP diphosphokinase [Staphylococcus epidermidis VCU129]
 gi|418664077|ref|ZP_13225573.1| GTP diphosphokinase [Staphylococcus epidermidis VCU081]
 gi|419771360|ref|ZP_14297414.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-K]
 gi|420163791|ref|ZP_14670525.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM095]
 gi|420165616|ref|ZP_14672307.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM088]
 gi|420168637|ref|ZP_14675245.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM087]
 gi|420170335|ref|ZP_14676896.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM070]
 gi|420173158|ref|ZP_14679653.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM067]
 gi|420174606|ref|ZP_14681055.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM061]
 gi|420184598|ref|ZP_14690707.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM040]
 gi|420190242|ref|ZP_14696186.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM037]
 gi|420192570|ref|ZP_14698428.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM023]
 gi|420196874|ref|ZP_14702608.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM020]
 gi|420202331|ref|ZP_14707924.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM018]
 gi|420204546|ref|ZP_14710104.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM015]
 gi|420206053|ref|ZP_14711563.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM008]
 gi|420209134|ref|ZP_14714572.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM003]
 gi|420212181|ref|ZP_14717534.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM001]
 gi|420214089|ref|ZP_14719369.1| GTP diphosphokinase [Staphylococcus epidermidis NIH05005]
 gi|420216238|ref|ZP_14721454.1| GTP diphosphokinase [Staphylococcus epidermidis NIH05001]
 gi|420220573|ref|ZP_14725532.1| GTP diphosphokinase [Staphylococcus epidermidis NIH04008]
 gi|420221584|ref|ZP_14726512.1| GTP diphosphokinase [Staphylococcus epidermidis NIH08001]
 gi|420225825|ref|ZP_14730652.1| GTP diphosphokinase [Staphylococcus epidermidis NIH06004]
 gi|420227420|ref|ZP_14732188.1| GTP diphosphokinase [Staphylococcus epidermidis NIH05003]
 gi|420229734|ref|ZP_14734438.1| GTP diphosphokinase [Staphylococcus epidermidis NIH04003]
 gi|420232145|ref|ZP_14736786.1| GTP diphosphokinase [Staphylococcus epidermidis NIH051668]
 gi|421606876|ref|ZP_16048128.1| GTP pyrophosphokinase [Staphylococcus epidermidis AU12-03]
 gi|59798397|sp|Q8CS97.1|RELA_STAES RecName: Full=GTP pyrophosphokinase; AltName: Full=(p)ppGpp
           synthase; AltName: Full=ATP:GTP
           3'-pyrophosphotransferase; AltName: Full=ppGpp synthase
           I
 gi|81674357|sp|Q5HNR8.1|RELA_STAEQ RecName: Full=GTP pyrophosphokinase; AltName: Full=(p)ppGpp
           synthase; AltName: Full=ATP:GTP
           3'-pyrophosphotransferase; AltName: Full=ppGpp synthase
           I
 gi|27315779|gb|AAO04914.1|AE016748_148 GTP pyrophosphokinase [Staphylococcus epidermidis ATCC 12228]
 gi|57637787|gb|AAW54575.1| GTP pyrophosphokinase [Staphylococcus epidermidis RP62A]
 gi|242233621|gb|EES35933.1| GTP pyrophosphokinase [Staphylococcus epidermidis W23144]
 gi|251805456|gb|EES58113.1| GTP pyrophosphokinase [Staphylococcus epidermidis BCM-HMP0060]
 gi|281294967|gb|EFA87494.1| GTP diphosphokinase [Staphylococcus epidermidis SK135]
 gi|291319444|gb|EFE59812.1| GTP diphosphokinase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|329735305|gb|EGG71597.1| GTP diphosphokinase [Staphylococcus epidermidis VCU045]
 gi|329737201|gb|EGG73455.1| GTP diphosphokinase [Staphylococcus epidermidis VCU028]
 gi|341653575|gb|EGS77342.1| GTP diphosphokinase [Staphylococcus epidermidis VCU105]
 gi|341655860|gb|EGS79583.1| GTP diphosphokinase [Staphylococcus epidermidis VCU037]
 gi|341657324|gb|EGS81014.1| GTP diphosphokinase [Staphylococcus epidermidis VCU109]
 gi|365232585|gb|EHM73576.1| GTP diphosphokinase [Staphylococcus epidermidis 14.1.R1.SE]
 gi|374407151|gb|EHQ78016.1| GTP diphosphokinase [Staphylococcus epidermidis VCU041]
 gi|374408270|gb|EHQ79102.1| GTP diphosphokinase [Staphylococcus epidermidis VCU065]
 gi|374410877|gb|EHQ81607.1| GTP diphosphokinase [Staphylococcus epidermidis VCU081]
 gi|374816752|gb|EHR80951.1| GTP diphosphokinase [Staphylococcus epidermidis VCU118]
 gi|374821214|gb|EHR85281.1| GTP diphosphokinase [Staphylococcus epidermidis VCU120]
 gi|374821769|gb|EHR85816.1| GTP diphosphokinase [Staphylococcus epidermidis VCU117]
 gi|374830622|gb|EHR94388.1| GTP diphosphokinase [Staphylococcus epidermidis VCU125]
 gi|374833733|gb|EHR97404.1| GTP diphosphokinase [Staphylococcus epidermidis VCU126]
 gi|374836241|gb|EHR99829.1| GTP diphosphokinase [Staphylococcus epidermidis VCU128]
 gi|374838528|gb|EHS02068.1| GTP diphosphokinase [Staphylococcus epidermidis VCU127]
 gi|374839221|gb|EHS02739.1| GTP diphosphokinase [Staphylococcus epidermidis VCU129]
 gi|383361586|gb|EID38956.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-K]
 gi|394232917|gb|EJD78528.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM095]
 gi|394233346|gb|EJD78954.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM087]
 gi|394235417|gb|EJD80989.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM088]
 gi|394240336|gb|EJD85760.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM067]
 gi|394240673|gb|EJD86096.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM070]
 gi|394244837|gb|EJD90169.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM061]
 gi|394257249|gb|EJE02171.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM040]
 gi|394259133|gb|EJE04003.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM037]
 gi|394260743|gb|EJE05547.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM023]
 gi|394266848|gb|EJE11466.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM020]
 gi|394269739|gb|EJE14269.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM018]
 gi|394273556|gb|EJE17987.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM015]
 gi|394277892|gb|EJE22209.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM008]
 gi|394279362|gb|EJE23670.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM003]
 gi|394280021|gb|EJE24312.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM001]
 gi|394284011|gb|EJE28172.1| GTP diphosphokinase [Staphylococcus epidermidis NIH05005]
 gi|394285926|gb|EJE29992.1| GTP diphosphokinase [Staphylococcus epidermidis NIH04008]
 gi|394290379|gb|EJE34240.1| GTP diphosphokinase [Staphylococcus epidermidis NIH08001]
 gi|394292328|gb|EJE36087.1| GTP diphosphokinase [Staphylococcus epidermidis NIH05001]
 gi|394293259|gb|EJE36982.1| GTP diphosphokinase [Staphylococcus epidermidis NIH06004]
 gi|394297044|gb|EJE40656.1| GTP diphosphokinase [Staphylococcus epidermidis NIH05003]
 gi|394298913|gb|EJE42471.1| GTP diphosphokinase [Staphylococcus epidermidis NIH04003]
 gi|394301468|gb|EJE44924.1| GTP diphosphokinase [Staphylococcus epidermidis NIH051668]
 gi|406657456|gb|EKC83843.1| GTP pyrophosphokinase [Staphylococcus epidermidis AU12-03]
          Length = 729

 Score =  335 bits (858), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 192/491 (39%), Positives = 291/491 (59%), Gaps = 49/491 (9%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           SYLS +E E V ++  +A+EAH GQ R++G P+I+HP++VA IL E+ LD  +I AG LH
Sbjct: 18  SYLSTSEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPTIVAGFLH 77

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D +EDT+  TFE +++ F   + RIV+G TK+ K+ K + K E       +A++ R++F+
Sbjct: 78  DVIEDTSY-TFEDVKDMFNEEIARIVDGVTKLKKV-KYRSKEEQ------QAENHRKLFI 129

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           A+ ++VRVI+VKLADRLHNMRTL  MP  KQ  I+ ETL+++APLA  LG+  IK ELE+
Sbjct: 130 AIAKDVRVILVKLADRLHNMRTLKAMPREKQVRISKETLEIYAPLAHRLGINTIKWELED 189

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
            +  Y ++  Y     R+ +L K+   E E      + KI+++  +  M +  EI    K
Sbjct: 190 TALRYIDSVQYF----RIVNLMKKKRSEREAYITNAINKIKNE--MTKMNLSGEINGRPK 243

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIY+ ++K +   +++  +  +RII+            +    CY  LGLVH +W P
Sbjct: 244 HIYSIYRKMIKQKKQFDQIFDLLAIRIIV------------NSINDCYATLGLVHTLWKP 291

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PK N YQSLHTT++     +   LE+QIRT EM  IAE G+AAH++ + 
Sbjct: 292 MPGRFKDYIAMPKQNMYQSLHTTVVG---PNGDPLEIQIRTHEMHEIAEHGVAAHWAYK- 347

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                            GKTV     +   +++WL   +E  E    +  ++EF++++  
Sbjct: 348 ----------------EGKTVNQKTQDFQNKLNWL---KELAETDHTSADAQEFMESLKY 388

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           DL   +V+ FTP  ++  LP GA  +D+AY IH+E+GNKM+ AKVNG +V   +VL   +
Sbjct: 389 DLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPIDYVLQTGD 448

Query: 619 VVEIITYNVSF 629
           ++EI T   S+
Sbjct: 449 IIEIRTSKHSY 459


>gi|420183290|ref|ZP_14689423.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM049]
 gi|420234790|ref|ZP_14739350.1| GTP diphosphokinase [Staphylococcus epidermidis NIH051475]
 gi|394249753|gb|EJD94966.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM049]
 gi|394304033|gb|EJE47443.1| GTP diphosphokinase [Staphylococcus epidermidis NIH051475]
          Length = 729

 Score =  335 bits (858), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 192/491 (39%), Positives = 291/491 (59%), Gaps = 49/491 (9%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           SYLS +E E V ++  +A+EAH GQ R++G P+I+HP++VA IL E+ LD  +I AG LH
Sbjct: 18  SYLSTSEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPTIVAGFLH 77

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D +EDT+  TFE +++ F   + RIV+G TK+ K+ K + K E       +A++ R++F+
Sbjct: 78  DVIEDTSY-TFEDVKDMFNEEIARIVDGVTKLKKV-KYRSKEEQ------QAENHRKLFI 129

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           A+ ++VRVI+VKLADRLHNMRTL  MP  KQ  I+ ETL+++APLA  LG+  IK ELE+
Sbjct: 130 AIAKDVRVILVKLADRLHNMRTLKAMPREKQVRISKETLEIYAPLAHRLGINTIKWELED 189

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
            +  Y ++  Y     R+ +L K+   E E      + KI+++  +  M +  EI    K
Sbjct: 190 TALRYIDSVQYF----RIVNLMKKKRSEREAYITNAINKIKNE--MTKMNLSGEINGRPK 243

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIY+ ++K +   +++  +  +RII+            +    CY  LGLVH +W P
Sbjct: 244 HIYSIYRKMIKQKKQFDQIFDLLAIRIIV------------NSINDCYATLGLVHTLWKP 291

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PK N YQSLHTT++     +   LE+QIRT EM  IAE G+AAH++ + 
Sbjct: 292 MPGRFKDYIAMPKQNMYQSLHTTVVG---PNGDPLEIQIRTHEMHEIAEHGVAAHWAYK- 347

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                            GKTV     +   +++WL   +E  E    +  ++EF++++  
Sbjct: 348 ----------------EGKTVNQKTQDFQNKLNWL---KELAETDHTSADAQEFMESLKY 388

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           DL   +V+ FTP  ++  LP GA  +D+AY IH+E+GNKM+ AKVNG +V   +VL   +
Sbjct: 389 DLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPIDYVLQTGD 448

Query: 619 VVEIITYNVSF 629
           ++EI T   S+
Sbjct: 449 IIEIRTSKHSY 459


>gi|357419457|ref|YP_004932449.1| (p)ppGpp synthetase I SpoT/RelA [Thermovirga lienii DSM 17291]
 gi|355396923|gb|AER66352.1| (p)ppGpp synthetase I, SpoT/RelA [Thermovirga lienii DSM 17291]
          Length = 775

 Score =  335 bits (858), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 199/486 (40%), Positives = 284/486 (58%), Gaps = 52/486 (10%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           SYLS  +L     A + A  AHDGQ R S EP+++HP+ VA IL E+ELD  ++ A LLH
Sbjct: 65  SYLSKEDLIKCGEAFVFAALAHDGQFRLSKEPYVVHPIRVAAILAEMELDVNTLEAALLH 124

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D +EDT+V T E +  +FG  V  +V+G   V+KLGK+  K    S +D +A++LR+MFL
Sbjct: 125 DVLEDTSV-TPEELSNKFGRDVLLLVDG---VTKLGKITFK----SFEDYQAENLRKMFL 176

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
            M ++VRV+++KLADRLHNM+T+ ++   KQ  IA ETL+++APLA  LG+YQIK ELE+
Sbjct: 177 VMAKDVRVVLIKLADRLHNMKTIQYLRMDKQIRIAKETLEIYAPLAHRLGIYQIKRELED 236

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
            +F   + E Y  ++RRV     E E+ +++A  IL KK      L+ M +K  I    K
Sbjct: 237 AAFKIADPEAYYDIRRRVKKKLPEREEIIKQAMTILEKK------LNEMGIKAHITGRAK 290

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIY+ + +   S+ E+  +  LR+I+                 CY VLG+VH IW P
Sbjct: 291 HFYSIYEKMRRKNLSLEELFDLLALRVIVDDVAT------------CYTVLGVVHTIWKP 338

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P    DYIA PK N YQSLHT +I    E    LEVQIRT +M  +AE G+A+H+    
Sbjct: 339 LPGQFDDYIANPKSNMYQSLHTAVIGPSGEP---LEVQIRTWDMHWLAEYGVASHW---- 391

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                        R   GK        +  ++SW+    E Q E        EF++ +  
Sbjct: 392 -------------RYKEGKQKL---DELDQKLSWIRQALETQAE---TSEPSEFLEHLKA 432

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           D+L S VFVFTP+G++ +LP G+T +D+AY IHTE+GNK + A VN  +V   + L N +
Sbjct: 433 DVLSSEVFVFTPKGDVISLPAGSTPLDFAYTIHTEVGNKFIGAMVNNRIVPIDYELQNGD 492

Query: 619 VVEIIT 624
           +V+I+T
Sbjct: 493 IVKILT 498


>gi|379727159|ref|YP_005319344.1| GTP pyrophosphokinase [Melissococcus plutonius DAT561]
 gi|376318062|dbj|BAL61849.1| GTP pyrophosphokinase [Melissococcus plutonius DAT561]
          Length = 739

 Score =  335 bits (858), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 188/491 (38%), Positives = 287/491 (58%), Gaps = 49/491 (9%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y+    + LV++AL  A +AH+GQ R+SGEP+IIHP++VA IL +L +D  ++A G LHD
Sbjct: 19  YMGSEHVALVKKALDYASQAHEGQIRKSGEPYIIHPIQVAGILADLHMDPYTVATGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            VEDT + T + +++EFG ++  +V+G   V+KLGK+K K+    +    A++ R+M LA
Sbjct: 79  VVEDTEI-TLDDLKDEFGESIAVLVDG---VTKLGKIKYKSHEEQL----AENHRKMLLA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M +++RVI+VKLADRLHNMRTL ++   KQ  IA ETL+++APLA  LG+ ++K ELE+ 
Sbjct: 131 MAQDLRVILVKLADRLHNMRTLKYLREDKQRRIAKETLEIYAPLAHRLGISRVKWELEDT 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           +  Y N   Y ++      ++    K +E  + I     E     + + +  EI    K 
Sbjct: 191 ALRYINPNQYYRI------VHLMQSKRIERESYIAQAVDEICYVTNELGISAEIYGRPKH 244

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIY+ +   +   NE+  +  +R+II               + CY VLG +H  W P+
Sbjct: 245 IYSIYRKMKDQKKQFNEIYDLLAIRVII------------DSIKDCYAVLGAIHTKWMPM 292

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK N YQS+HTT+I  +      +E+QIRT EM  IAE G+AAH++ +  
Sbjct: 293 PGRFKDYIAMPKTNMYQSIHTTVIGPMGNP---IEIQIRTREMHKIAEFGVAAHWAYK-- 347

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
                           GK   L + +++ ++ W   I E Q+E   +  + EF++++  D
Sbjct: 348 ---------------EGKADRLKSNDLSKQLDWFREIVELQDE---SYNASEFMESVKGD 389

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           +   +V+VFTP GE+  LPKG+  +D+AY IHTEIGNK   AKVNG +V   + L N ++
Sbjct: 390 IFSDKVYVFTPNGEVSELPKGSGPLDFAYNIHTEIGNKTTGAKVNGKIVQLDYSLKNGDI 449

Query: 620 VEIITYNVSFS 630
           +E++T   SF 
Sbjct: 450 IEVLTSANSFG 460


>gi|268319355|ref|YP_003293011.1| GTP pyrophosphokinase [Lactobacillus johnsonii FI9785]
 gi|262397730|emb|CAX66744.1| GTP pyrophosphokinase [Lactobacillus johnsonii FI9785]
          Length = 749

 Score =  335 bits (858), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 196/485 (40%), Positives = 280/485 (57%), Gaps = 47/485 (9%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++   L  V  A   A +AH+GQ R SG+P+IIHP +VA  L  L LD +++AAG LHD
Sbjct: 19  YMNDEHLAFVESAYEFAKKAHEGQFRVSGQPYIIHPTQVAGTLATLRLDPDTVAAGYLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
           TVEDT  VT + I+E+FG  V  IV+G   V+KL K++ K+++H  ++  AD+ R+M +A
Sbjct: 79  TVEDT-PVTNDDIKEKFGKDVAFIVDG---VTKLSKIQYKSKSH--EEYLADNHRKMLIA 132

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M +++RVI+VKLADRLHNM TL H+ P KQ  IA ETL ++APLA  LG+  IK ELE++
Sbjct: 133 MAKDLRVIMVKLADRLHNMHTLDHLRPDKQRRIADETLDIYAPLADRLGIGTIKWELEDM 192

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           S  Y N + Y ++   +     E E  + +A   L       Q LD + +K EI    K 
Sbjct: 193 SLHYLNPQQYYRIVNLMQSKRSEREGYIADAISTLK------QTLDSLGIKYEIYGRPKH 246

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIYK ++      +E+  +  +R+I+K              + CY VLG VH  W P+
Sbjct: 247 IYSIYKKMVNKHKDFSEIYDLLAVRVIVK------------SVKDCYAVLGAVHTKWKPM 294

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK NGYQSLHTT+I         LE+QIRTE M  +AE G+AAH++ +  
Sbjct: 295 PGRFKDYIAVPKVNGYQSLHTTIIG---PGGKPLEIQIRTEAMHQVAEYGVAAHWAYKEG 351

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
           V G V     N                  +++    I E Q E      S EF+ ++  D
Sbjct: 352 VKGEVEQTDANK-----------------KLNMFQEILELQNE---TKDSHEFMKSVKTD 391

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           +   RV+VFTP+G++  LPKG+  +D+AYMIH+E+G   V A++NG +V   + L   ++
Sbjct: 392 IFSDRVYVFTPKGDVYELPKGSGPLDFAYMIHSEVGAHSVGARINGKIVPLDYKLKTGDI 451

Query: 620 VEIIT 624
           VE++T
Sbjct: 452 VEMLT 456


>gi|418635800|ref|ZP_13198160.1| GTP diphosphokinase [Staphylococcus lugdunensis VCU139]
 gi|374841502|gb|EHS04973.1| GTP diphosphokinase [Staphylococcus lugdunensis VCU139]
          Length = 729

 Score =  335 bits (858), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 192/491 (39%), Positives = 290/491 (59%), Gaps = 49/491 (9%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           SYLSP++ + V ++  LA+EAH GQ R++G P+I+HP++VA IL E+ LD  +I AG LH
Sbjct: 18  SYLSPDDYQYVLKSYHLAYEAHQGQFRKNGLPYIMHPIQVAGILTEMRLDGPTIVAGFLH 77

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D +EDT   TF+ ++E F   + RIV+G TK+ K+ K + K E       +A++ R++F+
Sbjct: 78  DVIEDT-AYTFDDVKEMFNEEIARIVDGVTKLKKV-KYRSKEEQ------QAENHRKLFI 129

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           A+ ++VRVI+VKLADRLHNMRTL  MP  KQ  I+ ETL+++APLA  LG+  IK ELE+
Sbjct: 130 AIAKDVRVILVKLADRLHNMRTLKAMPRDKQIRISKETLEIYAPLADRLGINTIKWELED 189

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
            S  Y ++  Y     R+ +L K+   E E   K  +  I  D  +  M +K EI    K
Sbjct: 190 TSLRYIDSVQYF----RIVNLMKKKRSEREAYIKNAIDMI--DAEMIKMKIKGEINGRPK 243

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIY+ ++K +   +++  +  +R+I+            +    CY +LGLVH +W P
Sbjct: 244 HIYSIYRKMMKQKKQFDQIFDLLAIRVIV------------NSINDCYAILGLVHTLWKP 291

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PK N YQSLHTT++     +   LE+QIRT EM  IAE G+AAH++ + 
Sbjct: 292 MPGRFKDYIAMPKQNMYQSLHTTVVG---PNGDPLEIQIRTYEMHEIAEHGVAAHWAYK- 347

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                            GKTV     +   +++WL   +E  E    +  ++EF++++  
Sbjct: 348 ----------------EGKTVDEKTQDFQNKLNWL---KELAEADHTSNDAQEFMESLKY 388

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           DL   +V+ FTP  ++  LP GA  +D+AY IH+E+GNKM+ AK NG +V   +V+   +
Sbjct: 389 DLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKANGKIVPIDYVIQTGD 448

Query: 619 VVEIITYNVSF 629
           ++EI T   S+
Sbjct: 449 IIEIRTSKHSY 459


>gi|340397999|ref|YP_004727024.1| putative GTP pyrophosphokinase [Streptococcus salivarius CCHSS3]
 gi|387783264|ref|YP_006069347.1| putative GTP pyrophosphokinase (ATP:GTP 3-pyrophosphotransferase)
           (ppGpp synthetase I) ((p)ppGpp synthetase) (Stringent
           response-like protein) [Streptococcus salivarius
           JIM8777]
 gi|338741992|emb|CCB92497.1| putative GTP pyrophosphokinase (ATP:GTP 3-pyrophosphotransferase)
           (ppGpp synthetase I) ((p)ppGpp synthetase) (Stringent
           response-like protein) [Streptococcus salivarius CCHSS3]
 gi|338744146|emb|CCB94512.1| putative GTP pyrophosphokinase (ATP:GTP 3-pyrophosphotransferase)
           (ppGpp synthetase I) ((p)ppGpp synthetase) (Stringent
           response-like protein) [Streptococcus salivarius
           JIM8777]
          Length = 739

 Score =  335 bits (858), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 187/492 (38%), Positives = 291/492 (59%), Gaps = 49/492 (9%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           +Y+S ++L+LV +A   A +AH GQ R+SGEP+IIHP++VA IL +L LD  ++A G LH
Sbjct: 18  AYMSADDLKLVEKAWHYATDAHSGQSRQSGEPYIIHPIQVAGILADLHLDAVTVACGFLH 77

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT   T + +E +FG  VR IV+G   V+KLGK++ K+    +    A++ R+M +
Sbjct: 78  DVVEDTEK-TLDDLEADFGTDVRNIVDG---VTKLGKVEYKSHEEQL----AENHRKMLM 129

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM++++RVI+VKLADRLHNMRTL H+   KQ  I+ ET++++APLA  LG+ +IK ELE+
Sbjct: 130 AMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELED 189

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
           +SF Y N  ++ K    ++ + KE  +E EE    ++ KI+   +     +  ++    K
Sbjct: 190 MSFRYLNEVEFYK----ISHMMKEKRREREELVDEIVDKIK--TYTAEQGLVGDVYGRPK 243

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIY+ +   +   +++  +  +R +++                 Y +LG +H +W P
Sbjct: 244 HIYSIYRKMRDKKKRFDQIYDLIAIRCVME------------THSDVYAMLGYIHELWRP 291

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PK NGYQS+HTT    +Y     +E+QIRT+EM  +AE G+AAH++ + 
Sbjct: 292 MPGRFKDYIANPKSNGYQSIHTT----VYGPKGPIEIQIRTKEMHQVAEYGVAAHWAYKK 347

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
            + G V                 ++   AL ++W+  + E Q+   G+     FVD++  
Sbjct: 348 GIKGKV-----------------DSKESALGMNWIKDLVELQDASNGDAMG--FVDSVKE 388

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           D+   R++VFTP G ++ LPK +  +D+AY IHT++G K   AKVNG +V  T  L   +
Sbjct: 389 DIFSERIYVFTPNGAVQELPKDSGPIDFAYAIHTQVGEKATGAKVNGRMVPLTAKLKTGD 448

Query: 619 VVEIITYNVSFS 630
           VVEI+T   SF 
Sbjct: 449 VVEIVTNANSFG 460


>gi|300812618|ref|ZP_07093031.1| GTP diphosphokinase [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
 gi|300496399|gb|EFK31508.1| GTP diphosphokinase [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
          Length = 753

 Score =  335 bits (858), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 195/485 (40%), Positives = 279/485 (57%), Gaps = 50/485 (10%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++ ++L  V  A   A  AH+GQ R SG+P+I+HP +VA  L  L LD +++AAG LHD
Sbjct: 19  YMTADQLAFVESAYQFAARAHEGQTRASGQPYIVHPTQVAGTLANLGLDPDTVAAGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
           TVEDT+V T + I+E+FGA V  IV+G TK++K        E  S ++  A++ R+M +A
Sbjct: 79  TVEDTSV-TNDDIKEKFGADVAFIVDGVTKLNKY-------EYKSHKEFLAENHRKMLIA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M +++RVI+VKLADRLHNM TL H+ P KQ  IA ETL ++APLA  LG+  IK ELE++
Sbjct: 131 MAKDLRVILVKLADRLHNMHTLEHLRPDKQRRIAAETLDIYAPLADRLGIGTIKWELEDM 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           SF Y N E Y K+   +     E E  +++A   L         LD + +K +I    K 
Sbjct: 191 SFHYMNPEAYYKIVSMMDAKRSEREGYIKDAIDYLRGT------LDSLGIKYDISGRPKH 244

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIYK ++      NE+  +  +R+I+         P       CY VLG VH  W P+
Sbjct: 245 IYSIYKKMVNKHKDFNEIYDLLAVRVIV---------PTVKD---CYAVLGAVHTKWKPM 292

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK NGYQSLHTT+I         LE+QIRTEEM  +AE G+AAH++ +  
Sbjct: 293 PGRFKDYIAMPKANGYQSLHTTIIG---PGGKPLEIQIRTEEMHKVAEYGVAAHWAYK-- 347

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
                          RG    ++  +       L+  RE  E    +  + EF++ +  D
Sbjct: 348 ---------------RGNFQGVDEKDGGA----LDIGREILELQKDSSDADEFMEAVHSD 388

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           +   +V+VFTP+GE+  LPKG+  +D+AY IHT++G+  + AKVN  LV   + + N +V
Sbjct: 389 IFADKVYVFTPKGEVYELPKGSVTLDFAYAIHTQVGDHAIGAKVNDKLVPLDYKMKNGDV 448

Query: 620 VEIIT 624
           V+I+T
Sbjct: 449 VDILT 453


>gi|76797936|ref|ZP_00780197.1| (p)ppGpp synthetase [Streptococcus agalactiae 18RS21]
 gi|76586710|gb|EAO63207.1| (p)ppGpp synthetase [Streptococcus agalactiae 18RS21]
          Length = 485

 Score =  335 bits (858), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 190/496 (38%), Positives = 294/496 (59%), Gaps = 50/496 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  Y+S  ++  V+ AL  A  AH  Q R+SGEP+IIHP++VA IL +L LD  ++A G 
Sbjct: 16  TSQYMSETDVAFVKFALNYATAAHYYQARKSGEPYIIHPIQVAGILADLHLDAVTVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT + T + IE +FG  VR I++G   V+KLGK++ K+    +    A++ R+M
Sbjct: 76  LHDVVEDTEI-TLDEIETDFGKDVRDIIDG---VTKLGKVEYKSHEEQL----AENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM++++RVI+VKLADRLHNMRTL H+   KQ  I+ ET++++APLA  LG+ +IK EL
Sbjct: 128 LMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y N  ++ K    ++ +  E  +E EE   I++ KI    + +   +  +I   
Sbjct: 188 EDLSFRYLNETEFYK----ISHMMSEKRREREELVDIIVDKIR--SYTEEQGLYGDIYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSIY+ +   +   +++  +  +R I+  +  S V          Y ++G +H +W
Sbjct: 242 PKHIYSIYRKMRDKKKRFDQIYDLIAIRCIM--ETASDV----------YAMVGYIHELW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA PK NGYQS+HTT    +Y     +E+QIRT+EM  +AE G+AAH++ 
Sbjct: 290 RPMPGRFKDYIAAPKANGYQSIHTT----VYGPKGPIEIQIRTKEMHQVAEFGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +                 +G T  +N A  ++ + W+  + E Q+E   +  +++FVD++
Sbjct: 346 K-----------------KGITSKVNQAEQSVGMGWIQELVELQDE---SKDAKDFVDSV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             D+   R++VFTP G ++ LP+ +  +D+AY IHT++G K   AKVNG +V  T  L  
Sbjct: 386 KEDIFTERIYVFTPNGAVQELPRESGPIDFAYAIHTQVGKKATGAKVNGRMVPLTAKLKT 445

Query: 617 AEVVEIITYNVSFSLT 632
            +VVEIIT   SF  +
Sbjct: 446 GDVVEIITNPNSFGTS 461


>gi|166031162|ref|ZP_02233991.1| hypothetical protein DORFOR_00848 [Dorea formicigenerans ATCC
           27755]
 gi|166029009|gb|EDR47766.1| RelA/SpoT family protein [Dorea formicigenerans ATCC 27755]
          Length = 803

 Score =  335 bits (858), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 202/538 (37%), Positives = 309/538 (57%), Gaps = 56/538 (10%)

Query: 92  LLGKLPRSSLLHVACKRWRLCLSPSVSSDAFKEDSPERLWEDLRPTISYLSPN-ELELVR 150
           L GK+   +LL     + ++     +  +A   D P++L+  L   I    P+ ++  + 
Sbjct: 33  LDGKIAPEALLKDTRGKLQMVDGHGIKQEA-DYDDPDKLYGMLIARIQKYHPSADVTQIE 91

Query: 151 RALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFE 210
           +A  LA +AH  QKR+SGEP+IIHP+ VA IL +LE+D E+I A LLHD VEDT +   +
Sbjct: 92  KAYNLAKKAHGDQKRKSGEPYIIHPLWVAIILADLEMDKETIIAALLHDVVEDTRIGE-D 150

Query: 211 RIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVK 270
            I+EEFG  V  +V+G   V+KLG++    +   +Q   A++LR+MFLAM +++RVII+K
Sbjct: 151 YIKEEFGEEVALLVDG---VTKLGRVAYSADKLELQ---AENLRKMFLAMAKDIRVIIIK 204

Query: 271 LADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYA 330
           LADRLHNMRTL  M P KQ   A ET+ ++AP+A  LG+ +IK+EL++LS  Y   + + 
Sbjct: 205 LADRLHNMRTLQFMTPAKQQEKARETMDIYAPIAGRLGISKIKTELDDLSLKYLKPDVFF 264

Query: 331 KVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT--VKTEIRSVCKEPYSIYKAVL 388
            +  ++     E E+         +++I D+  + +    +K ++    K  +SIYK ++
Sbjct: 265 DLVNQINARKTEREE--------FVQQIVDEVSMHMKNAGIKADVNGRVKHFFSIYKKMV 316

Query: 389 KSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYIA 448
               +++++  +  +RII+               + CY  LG++H I+TPIP   KDYIA
Sbjct: 317 NQDKTVDQIYDLFAVRIIV------------DSVKDCYAALGIIHEIYTPIPGRFKDYIA 364

Query: 449 TPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHAR 508
            PKPN YQSLHTTL+  + +     E+QIRT+EM   AE GIAAH+             +
Sbjct: 365 MPKPNMYQSLHTTLMSSIGQP---FEIQIRTQEMHKTAEYGIAAHWK-----------YK 410

Query: 509 PNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR--DLLGSRVF 566
            +G S +G            ++SWL  I EWQ +   N   +EF+  I    DL    V+
Sbjct: 411 ESGGSKKGVMAEEE------KMSWLRQILEWQRDMSDN---KEFLSLIKGDLDLFADDVY 461

Query: 567 VFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
            FTP+G++K LP G+T +D+AY IH+ +GNKMV A+VNG LV   + + N + +EI+T
Sbjct: 462 CFTPQGDVKTLPTGSTPIDFAYSIHSAVGNKMVGARVNGKLVPIDYRIQNGDRIEILT 519


>gi|77411860|ref|ZP_00788193.1| GTP pyrophosphokinase family protein [Streptococcus agalactiae
           CJB111]
 gi|77162081|gb|EAO73059.1| GTP pyrophosphokinase family protein [Streptococcus agalactiae
           CJB111]
          Length = 738

 Score =  335 bits (858), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 190/494 (38%), Positives = 293/494 (59%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  Y+S  ++  V+ AL  A  AH  Q R+SGEP+IIHP++VA IL +L LD  ++A G 
Sbjct: 16  TSQYMSETDVAFVKFALNYATAAHYYQARKSGEPYIIHPIQVAGILADLHLDAVTVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT + T + IE +FG  VR I++G   V+KLGK++ K+    +    A++ R+M
Sbjct: 76  LHDVVEDTEI-TLDEIETDFGKDVRDIIDG---VTKLGKVEYKSHEEQL----AENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM++++RVI+VKLADRLHNMRTL H+   KQ  I+ ET++++APLA  LG+ +IK EL
Sbjct: 128 LMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y N  ++ K    ++ +  E  +E EE   I++ KI    + +   +  +I   
Sbjct: 188 EDLSFRYLNETEFYK----ISHMMSEKRREREELVDIIVDKIR--SYTEEQGLYGDIYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSIY+ +   +   +++  +  +R I+  +  S V          Y ++G +H +W
Sbjct: 242 PKHIYSIYRKMRDKKKRFDQIYDLIAIRCIM--ETASDV----------YAMVGYIHELW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA PK NGYQS+HTT    +Y     +E+QIRT+EM  +AE G+AAH++ 
Sbjct: 290 RPMPGRFKDYIAAPKANGYQSIHTT----VYGPKGPIEIQIRTKEMHQVAEFGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +                 +G T  +N A  ++ + W+  + E Q+E   +  +++FVD++
Sbjct: 346 K-----------------KGITSKVNQAEQSVGMGWIQELVELQDE---SKDAKDFVDSV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             D+   R++VFTP G ++ LP+ +  +D+AY IHT++G K   AKVNG +V  T  L  
Sbjct: 386 KEDIFTERIYVFTPNGAVQELPRESGPIDFAYAIHTQVGEKATGAKVNGRMVPLTAKLKT 445

Query: 617 AEVVEIITYNVSFS 630
            +VVEIIT   SF 
Sbjct: 446 GDVVEIITNPNSFG 459


>gi|306829044|ref|ZP_07462235.1| GTP diphosphokinase [Streptococcus mitis ATCC 6249]
 gi|304428849|gb|EFM31938.1| GTP diphosphokinase [Streptococcus mitis ATCC 6249]
          Length = 738

 Score =  335 bits (858), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 191/494 (38%), Positives = 294/494 (59%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YLS  ++  V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD  ++A G 
Sbjct: 16  TQKYLSKEDVAFVHKALVYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT+  T + +E+EFG  VR IV+G   V+KLGK++ K    S+++  A++ R+M
Sbjct: 76  LHDVVEDTDA-TLDDLEQEFGHDVRIIVDG---VTKLGKVEYK----SIEEQLAENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM+E++RVI+VKL+DRLHNMRTL+H+   KQ  I+ ET++++APLA  LG+  +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLNHLRKDKQERISRETMEIYAPLAHRLGISSVKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y N  ++ K+   + +  +E E  ++E    ++ K+ED  +     +K +I   
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLED--YTSERNLKGKIYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSIY+ +   +    E+  +  +R I++                 Y +LG VH +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFEEIYDLIAIRCILE------------THSDVYAMLGYVHELW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA  K NGYQS+HTT    +Y     +E QIRT+EM  +AE G+AAH++ 
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  + G V                 N+   A+ ++W+  + E Q++      ++EFVD++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMIELQDQ---ADDAKEFVDSV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             + L   ++VFTP G +++LPK +  +D+AY IHT++G K   AKVNG +V  T  L  
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445

Query: 617 AEVVEIITYNVSFS 630
            + VEI+T   SF 
Sbjct: 446 GDQVEIVTNPNSFG 459


>gi|449896310|ref|ZP_21789603.1| putative stringent response protein [Streptococcus mutans R221]
 gi|449932704|ref|ZP_21802946.1| putative stringent response protein [Streptococcus mutans 3SN1]
 gi|450046159|ref|ZP_21838781.1| putative stringent response protein [Streptococcus mutans N34]
 gi|450180207|ref|ZP_21887099.1| putative stringent response protein [Streptococcus mutans 24]
 gi|449161049|gb|EMB64267.1| putative stringent response protein [Streptococcus mutans 3SN1]
 gi|449199191|gb|EMC00269.1| putative stringent response protein [Streptococcus mutans N34]
 gi|449248487|gb|EMC46730.1| putative stringent response protein [Streptococcus mutans 24]
 gi|449262493|gb|EMC59942.1| putative stringent response protein [Streptococcus mutans R221]
          Length = 740

 Score =  335 bits (858), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 188/491 (38%), Positives = 288/491 (58%), Gaps = 49/491 (9%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++  ++  V++AL  A E H GQ R+SGEP+IIHP++VA IL +L LD  +++ G LHD
Sbjct: 19  YMNKADIAFVQKALDYATECHSGQFRKSGEPYIIHPIQVAGILADLHLDAITVSCGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            +EDT   T + +E +FG+ V+ IV+G   V+KLGK++ K+    +    A++ R+M +A
Sbjct: 79  VIEDTEA-TLDHLEAKFGSDVKNIVDG---VTKLGKVEYKSHEEQL----AENHRKMLMA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M++++RVI+VKLADRLHNMRTL H+   KQ  I+ ET++++APLA  LG+ +IK ELE+L
Sbjct: 131 MSKDIRVILVKLADRLHNMRTLRHLRKDKQERISRETMEIYAPLAHRLGISRIKWELEDL 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           +F Y N  ++ K    ++ L  E  +E E     ++ KI+   +     +  EI    K 
Sbjct: 191 AFRYLNEVEFYK----ISHLMNEKRREREALVDDIVDKIK--AYTAEQGLHGEIYGRPKH 244

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIY+ +   +   +++  +  +R I+              Q   Y +LG +H +W P+
Sbjct: 245 IYSIYRKMRDKKKRFDQIYDLIAIRCIL------------DTQSDVYAMLGYIHELWRPM 292

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK NGYQS+HTT    +Y     +EVQIRT EM  +AE G+AAH++ +  
Sbjct: 293 PGRFKDYIANPKANGYQSIHTT----VYGPKGPIEVQIRTHEMHQVAEYGVAAHWAYKKG 348

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
           + G V                 N+   AL ++W+  + E Q+   GN    +FVD++  D
Sbjct: 349 IKGKV-----------------NSQESALGMNWIKELVELQDASNGNAV--DFVDSVKED 389

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           +   R++VFTP G ++ LPK +  +D+AY IHT++G K   AKVNG ++  T  L   +V
Sbjct: 390 IFAERIYVFTPNGAVQELPKDSGPIDFAYAIHTQVGEKATGAKVNGRMIPLTAKLKTGDV 449

Query: 620 VEIITYNVSFS 630
           VEIIT + SF 
Sbjct: 450 VEIITNSNSFG 460


>gi|295106146|emb|CBL03689.1| (p)ppGpp synthetase, RelA/SpoT family [Gordonibacter pamelaeae
           7-10-1-b]
          Length = 802

 Score =  335 bits (858), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 205/501 (40%), Positives = 289/501 (57%), Gaps = 51/501 (10%)

Query: 124 EDSPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILG 183
           E   ER  E  R T +YLS  +  L+ +A   A EAH+GQ R+SGEPF+ HPVEVA IL 
Sbjct: 55  ETPEERFAELQRLTSAYLSEPDQALLAKAFQFASEAHEGQCRKSGEPFVAHPVEVAIILA 114

Query: 184 ELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENH 243
           +L +D E++ A LLHDTVEDT  VT E++  EF   V ++VEG TK++++       E  
Sbjct: 115 DLRMDVETLCAALLHDTVEDT-CVTTEQVAVEFNEQVAQLVEGVTKITRI-------EVE 166

Query: 244 SVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPL 303
           S+ D +A  +R+MF+AM++++RVI++KLADRLHNMRTL  +   ++   A ETL+++AP+
Sbjct: 167 SLSDEQAATIRKMFVAMSKDIRVIVIKLADRLHNMRTLGALREDRRIFKARETLEIYAPI 226

Query: 304 AKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQF 363
           A  LG+  IK ELE+LSF Y     Y +V R V +   E E  L++   IL  ++E    
Sbjct: 227 AHRLGINNIKWELEDLSFYYLEPNKYKQVSRMVTESRAEREGYLDQIIGILHDEMEK--- 283

Query: 364 LDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQ 423
              + +  +I    K  YSIY+ + +     +E+  +  +RII+               +
Sbjct: 284 ---VGITAQIMGRPKHLYSIYQKMTQKGKGFSEIYDLIAVRIIV------------PSVK 328

Query: 424 ICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMD 483
            CY  LG VH +W P+P   KDYIA PK N YQSLHTT+I     +   LEVQIRTE+M 
Sbjct: 329 DCYLALGAVHTLWHPMPGRFKDYIAMPKYNMYQSLHTTVIG---PAGRPLEVQIRTEDMH 385

Query: 484 LIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEF 543
             +E G+AAH+           +    G+S            I  +++WL  + +WQ+E 
Sbjct: 386 RQSEYGVAAHWR----------YKEKGGKS---------GDAIDQQLAWLRQMVDWQDE- 425

Query: 544 VGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKV 603
                SREF+  +  DL  S VFVFTP+GE  +L  G+T VD+AY IHTE+GN  V AKV
Sbjct: 426 --TQDSREFLKDLKVDLAPSEVFVFTPKGEAMSLRAGSTPVDFAYAIHTEVGNHCVGAKV 483

Query: 604 NGNLVSPTHVLANAEVVEIIT 624
           NG +V  T+ L   + VEI+T
Sbjct: 484 NGAIVPLTYELQLGDRVEILT 504


>gi|333371965|ref|ZP_08463903.1| GTP diphosphokinase [Desmospora sp. 8437]
 gi|332975146|gb|EGK12048.1| GTP diphosphokinase [Desmospora sp. 8437]
          Length = 737

 Score =  335 bits (858), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 197/491 (40%), Positives = 280/491 (57%), Gaps = 51/491 (10%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           YL+  +LE V +A + A EAH GQ R+SGE +I HPV VA IL EL++D  ++ + +LHD
Sbjct: 34  YLNKEDLEQVEKAYLFAAEAHRGQTRKSGEEYIHHPVAVAGILAELQMDATTLISAILHD 93

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            VEDT   T E +E EFG TV +IV+G TK+ +  K K   E+      +A++ R+MF+A
Sbjct: 94  VVEDTGA-TLETVEAEFGETVAQIVDGLTKLKQRMKYKSTAEH------QAENHRKMFVA 146

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M +++RVI++KLADRLHNMRTL ++P  K+  IA ETL++FAPLA  LG+  IK ELE+ 
Sbjct: 147 MAQDIRVILIKLADRLHNMRTLKYLPEAKRRRIAKETLEIFAPLAHRLGISTIKWELEDS 206

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           S    N + Y ++   +     E EK L+E    + +++E       M +  +I    K 
Sbjct: 207 SLRNLNPQQYYRIVNLMKQKRAEREKYLDEVIATIRERLEG------MNLSADISGRPKH 260

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIY+ ++K     NE+  +  +R+I+               + CY VLG++H IW P+
Sbjct: 261 IYSIYRKMVKDHKQFNEIYDLLAVRVIV------------DSIRDCYAVLGIIHTIWKPM 308

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK N YQSLHTT+I    E    +EVQIRT EM  IAE GIAAH+     
Sbjct: 309 PGRFKDYIAMPKANMYQSLHTTVIGPKGEP---IEVQIRTREMHRIAEYGIAAHW----- 360

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
                  A   G    G        +   ++ +   I E Q+E      +REFV+ +  D
Sbjct: 361 -------AYKEGAQIEG--------SFNEKLKFFREILEMQQE---THDAREFVENLKVD 402

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
                VFVFTP+G++  LP G+  +D+AY IHTE+GN+ + AKVN  +V   H L   ++
Sbjct: 403 WFSDSVFVFTPKGDVLELPSGSVPLDFAYRIHTEVGNRCIGAKVNNKIVPLDHRLKTGDI 462

Query: 620 VEIITYNVSFS 630
           VEI+T   S+ 
Sbjct: 463 VEILTSKHSYG 473


>gi|22538077|ref|NP_688928.1| GTP pyrophosphokinase [Streptococcus agalactiae 2603V/R]
 gi|25011966|ref|NP_736361.1| hypothetical protein gbs1928 [Streptococcus agalactiae NEM316]
 gi|76788162|ref|YP_330495.1| GTP pyrophosphokinase [Streptococcus agalactiae A909]
 gi|77405021|ref|ZP_00782121.1| GTP pyrophosphokinase family protein [Streptococcus agalactiae
           H36B]
 gi|77407895|ref|ZP_00784647.1| GTP pyrophosphokinase family protein [Streptococcus agalactiae
           COH1]
 gi|339300607|ref|ZP_08649750.1| GTP diphosphokinase [Streptococcus agalactiae ATCC 13813]
 gi|417006340|ref|ZP_11944910.1| GTP pyrophosphokinase [Streptococcus agalactiae FSL S3-026]
 gi|421146328|ref|ZP_15606044.1| GTP pyrophosphokinase [Streptococcus agalactiae GB00112]
 gi|22534982|gb|AAN00801.1|AE014279_8 GTP pyrophosphokinase family protein [Streptococcus agalactiae
           2603V/R]
 gi|24413508|emb|CAD47587.1| Unknown [Streptococcus agalactiae NEM316]
 gi|76563219|gb|ABA45803.1| GTP pyrophosphokinase [Streptococcus agalactiae A909]
 gi|77173540|gb|EAO76657.1| GTP pyrophosphokinase family protein [Streptococcus agalactiae
           COH1]
 gi|77176315|gb|EAO79084.1| GTP pyrophosphokinase family protein [Streptococcus agalactiae
           H36B]
 gi|319745978|gb|EFV98261.1| GTP diphosphokinase [Streptococcus agalactiae ATCC 13813]
 gi|341576521|gb|EGS26932.1| GTP pyrophosphokinase [Streptococcus agalactiae FSL S3-026]
 gi|401686962|gb|EJS82926.1| GTP pyrophosphokinase [Streptococcus agalactiae GB00112]
          Length = 738

 Score =  335 bits (858), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 190/494 (38%), Positives = 293/494 (59%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  Y+S  ++  V+ AL  A  AH  Q R+SGEP+IIHP++VA IL +L LD  ++A G 
Sbjct: 16  TSQYMSETDVAFVKFALNYATAAHYYQARKSGEPYIIHPIQVAGILADLHLDAVTVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT + T + IE +FG  VR I++G   V+KLGK++ K+    +    A++ R+M
Sbjct: 76  LHDVVEDTEI-TLDEIETDFGKDVRDIIDG---VTKLGKVEYKSHEEQL----AENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM++++RVI+VKLADRLHNMRTL H+   KQ  I+ ET++++APLA  LG+ +IK EL
Sbjct: 128 LMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y N  ++ K    ++ +  E  +E EE   I++ KI    + +   +  +I   
Sbjct: 188 EDLSFRYLNETEFYK----ISHMMSEKRREREELVDIIVDKIR--SYTEEQGLYGDIYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSIY+ +   +   +++  +  +R I+  +  S V          Y ++G +H +W
Sbjct: 242 PKHIYSIYRKMRDKKKRFDQIYDLIAIRCIM--ETASDV----------YAMVGYIHELW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA PK NGYQS+HTT    +Y     +E+QIRT+EM  +AE G+AAH++ 
Sbjct: 290 RPMPGRFKDYIAAPKANGYQSIHTT----VYGPKGPIEIQIRTKEMHQVAEFGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +                 +G T  +N A  ++ + W+  + E Q+E   +  +++FVD++
Sbjct: 346 K-----------------KGITSKVNQAEQSVGMGWIQELVELQDE---SKDAKDFVDSV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             D+   R++VFTP G ++ LP+ +  +D+AY IHT++G K   AKVNG +V  T  L  
Sbjct: 386 KEDIFTERIYVFTPNGAVQELPRESGPIDFAYAIHTQVGEKATGAKVNGRMVPLTAKLKT 445

Query: 617 AEVVEIITYNVSFS 630
            +VVEIIT   SF 
Sbjct: 446 GDVVEIITNPNSFG 459


>gi|421276618|ref|ZP_15727439.1| GTP diphosphokinase [Streptococcus mitis SPAR10]
 gi|395876824|gb|EJG87896.1| GTP diphosphokinase [Streptococcus mitis SPAR10]
          Length = 738

 Score =  335 bits (858), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 193/494 (39%), Positives = 293/494 (59%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YLS  ++  V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD  ++A G 
Sbjct: 16  TQKYLSKEDVAFVHKALVYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT+  T + +E EFG  VR IV+G   V+KLGK++ K    S+++  A++ R+M
Sbjct: 76  LHDVVEDTDA-TLDDLEREFGHDVRVIVDG---VTKLGKVEYK----SIEEQLAENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM+E++RVI+VKL+DRLHNMRTL+H+   KQ  I+ ET++++APLA  LG+  +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLTHLRKDKQERISRETMEIYAPLAHRLGISSVKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y N  ++ K+   + +  +E E  ++E    ++ K+E  ++     +  +I   
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRQEREALVDE----VVTKLE--EYSSERNLTGKIYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSIY+ +   +    E+  +  +R I+              Q   Y +LG VH +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHELW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA  K NGYQS+HTT    +Y     +E QIRT+EM  +AE G+AAH++ 
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWA- 344

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
             +  G+ G               +N+   A+ ++W+  + E Q++      ++EFVDT+
Sbjct: 345 --YKKGMKGQ--------------VNSKESAIGMNWIKEMMELQDQ---ADDAKEFVDTV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             + L   ++VFTP G +++LPK +  +D+AY IHT+IG K   AKVNG +V  T  L  
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKIGEKATGAKVNGRMVPLTTKLKT 445

Query: 617 AEVVEIITYNVSFS 630
            + VEIIT   SF 
Sbjct: 446 GDQVEIITNPNSFG 459


>gi|419706966|ref|ZP_14234473.1| GTP pyrophosphokinase (Stringent response) [Streptococcus
           salivarius PS4]
 gi|383283394|gb|EIC81351.1| GTP pyrophosphokinase (Stringent response) [Streptococcus
           salivarius PS4]
          Length = 739

 Score =  335 bits (858), Expect = 7e-89,   Method: Compositional matrix adjust.
 Identities = 188/492 (38%), Positives = 292/492 (59%), Gaps = 49/492 (9%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           +Y+S ++L+LV +A   A EAH+GQ R+SGEP+IIHP++VA IL +L LD  ++A G LH
Sbjct: 18  AYMSADDLKLVEKAWHYATEAHNGQFRQSGEPYIIHPIQVAGILADLHLDAVTVACGFLH 77

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT   T + +E +FG  VR IV+G   V+KLGK++ K+    +    A++ R+M +
Sbjct: 78  DVVEDTEK-TLDDLEADFGLDVRNIVDG---VTKLGKVEYKSHEEQL----AENHRKMLM 129

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM++++RVI+VKLADRLHNMRTL H+   KQ  I+ ET++++APLA  LG+ +IK ELE+
Sbjct: 130 AMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELED 189

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
           ++F Y N  ++ K    ++ + KE  +E EE    ++ KI+   +     +  +I    K
Sbjct: 190 MAFRYLNEVEFYK----ISHMMKEKRREREELVDEIVAKIK--TYTSEQGLVGDIYGRPK 243

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIY+ +   +   +++  +  +R +++                 Y +LG +H +W P
Sbjct: 244 HIYSIYRKMRDKKKRFDQIYDLIAIRCVME------------THSDVYAMLGYIHELWRP 291

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PK NGYQS+HTT    +Y     +E+QIRT+EM  +AE G+AAH++ + 
Sbjct: 292 MPGRFKDYIANPKSNGYQSIHTT----VYGPKGPIEIQIRTKEMHQVAEYGVAAHWAYKK 347

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
            + G V                 ++   AL ++W+  + E Q+   G+     FVD++  
Sbjct: 348 GIKGKV-----------------DSKESALGMNWIKDLVELQDASNGDAMG--FVDSVKE 388

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           D+   R++VFTP G ++ LPK +  +D+AY IHT++G K   AKVNG +V  T  L   +
Sbjct: 389 DIFSERIYVFTPNGAVQELPKDSGPIDFAYAIHTQVGEKATGAKVNGRMVPLTAKLKTGD 448

Query: 619 VVEIITYNVSFS 630
           VVEI+T   SF 
Sbjct: 449 VVEIVTNANSFG 460


>gi|227893456|ref|ZP_04011261.1| GTP diphosphokinase [Lactobacillus ultunensis DSM 16047]
 gi|227864735|gb|EEJ72156.1| GTP diphosphokinase [Lactobacillus ultunensis DSM 16047]
          Length = 749

 Score =  335 bits (858), Expect = 7e-89,   Method: Compositional matrix adjust.
 Identities = 195/485 (40%), Positives = 280/485 (57%), Gaps = 49/485 (10%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++  ++  V +A   A +AH GQKR SG+P+IIHP +VA  L  L LD +++AAG LHD
Sbjct: 22  YMNDKQVAFVEKAYEFANKAHAGQKRASGQPYIIHPTQVAGTLATLGLDPDTVAAGFLHD 81

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
           TVEDT  VT + ++E+FG  V  IV+G TK++K        E  S Q+  A++ R+M +A
Sbjct: 82  TVEDT-PVTNDELKEKFGEDVAFIVDGVTKLNKY-------EYKSHQEFLAENHRKMLIA 133

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M +++RVI+VKLADRLHNM TL H+ P KQ  IA+ET+ ++APLA  LG+  IK ELE++
Sbjct: 134 MAKDLRVIMVKLADRLHNMHTLQHLRPDKQRRIASETMDIYAPLADRLGIGTIKWELEDM 193

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           SF Y N E Y ++   +     + EK + +  K L K       LD + +K EI    K 
Sbjct: 194 SFHYLNPEAYYRIVNLMDVKRSQREKYIADTIKTLKKT------LDELGIKYEIYGRPKH 247

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIYK ++      +E+  +  +R+I+K              + CY VLG VH  W P+
Sbjct: 248 IYSIYKKMVNKHKDFDEIYDLLAVRVIVK------------NVRDCYAVLGAVHTEWKPM 295

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK NGYQSLHTT+I         LE+QIRTE M  +AE G+AAH++ +  
Sbjct: 296 PGRFKDYIAMPKVNGYQSLHTTIIG---PGGRPLEIQIRTEAMHQVAEYGVAAHWAYK-- 350

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
                          RG    +       ++  +  I E ++E      + EF+ ++  D
Sbjct: 351 ---------------RGNFTGVQETTSGEKLDMVREILELKDE---TKDAGEFMKSVKSD 392

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           +   RV+VFTP+GE+  LPKG+  +D+AY IHT++G+  V AKVN  LV   + L N +V
Sbjct: 393 IFSDRVYVFTPKGEVYELPKGSVTLDFAYAIHTQVGSHAVGAKVNNKLVPLDYKLRNGDV 452

Query: 620 VEIIT 624
           +EI+T
Sbjct: 453 IEIMT 457


>gi|257064877|ref|YP_003144549.1| (p)ppGpp synthetase, RelA/SpoT family [Slackia heliotrinireducens
           DSM 20476]
 gi|256792530|gb|ACV23200.1| (p)ppGpp synthetase, RelA/SpoT family [Slackia heliotrinireducens
           DSM 20476]
          Length = 789

 Score =  334 bits (857), Expect = 7e-89,   Method: Compositional matrix adjust.
 Identities = 199/500 (39%), Positives = 294/500 (58%), Gaps = 51/500 (10%)

Query: 126 SPE-RLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
           SPE R  E +R   +YL   ++ L+ +A   A  AH GQKR+SGEPFI HPVEVA IL +
Sbjct: 45  SPEMRFKELVRLAGAYLPEEDMLLLEKAYRFAESAHKGQKRKSGEPFIAHPVEVALILAD 104

Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
           L +D +++ A LLHDTVEDT+V T + + + F  +V  +VEG TK++++       E  S
Sbjct: 105 LRMDVDTLCAALLHDTVEDTDV-THKDLLDTFNESVANLVEGVTKITQV-------EVES 156

Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
           + D +A  +R+MF+AM+ ++RVI++KLADRLHNMRTLS +   ++   A ETL+++AP+A
Sbjct: 157 LTDEQAATIRKMFVAMSHDIRVIVIKLADRLHNMRTLSALREDRRIFKAHETLEIYAPIA 216

Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
             LG+  IK ELE+LSF Y +   + ++ + VA+   + E  L    + L   + D    
Sbjct: 217 HRLGIGSIKWELEDLSFYYLDPARFKQIAQMVAESRAQREAYLSRVIETLRDDVND---- 272

Query: 365 DLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
             + +K  I    K  YSI + ++      +E+  +  +RII++              + 
Sbjct: 273 --LNIKAHIAGRPKHLYSINQKMINREKGFSEIYDLIAVRIIVE------------SVKD 318

Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDL 484
           CY VLG VH +W P+P   KDYIA PK NGYQSLHTT+I     +   LEVQIRTEEM  
Sbjct: 319 CYSVLGSVHSLWHPMPGRFKDYIAMPKANGYQSLHTTVIG---PAGRPLEVQIRTEEMHR 375

Query: 485 IAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFV 544
           ++E G+AAH+  +          + N ++         +A    +I+WL  + +WQ+E  
Sbjct: 376 LSEYGVAAHWRYK---------EKGNSKA---------DAAFDKQIAWLRQMVDWQDE-- 415

Query: 545 GNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVN 604
               SREF+  +  DL  S VFVFTP GE+ +L  G+T +D+AY +HTE+GN  V AKVN
Sbjct: 416 -TQDSREFLSELKVDLAPSEVFVFTPAGEVMSLRAGSTPIDFAYAVHTEVGNHCVGAKVN 474

Query: 605 GNLVSPTHVLANAEVVEIIT 624
           G++V  ++ L   + VEI+T
Sbjct: 475 GDIVPLSYQLKMGDRVEILT 494


>gi|418606224|ref|ZP_13169516.1| GTP diphosphokinase [Staphylococcus epidermidis VCU057]
 gi|418621259|ref|ZP_13184038.1| GTP diphosphokinase [Staphylococcus epidermidis VCU123]
 gi|374409014|gb|EHQ79818.1| GTP diphosphokinase [Staphylococcus epidermidis VCU057]
 gi|374829871|gb|EHR93665.1| GTP diphosphokinase [Staphylococcus epidermidis VCU123]
          Length = 590

 Score =  334 bits (857), Expect = 7e-89,   Method: Compositional matrix adjust.
 Identities = 192/491 (39%), Positives = 291/491 (59%), Gaps = 49/491 (9%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           SYLS +E E V ++  +A+EAH GQ R++G P+I+HP++VA IL E+ LD  +I AG LH
Sbjct: 18  SYLSTSEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPTIVAGFLH 77

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D +EDT+  TFE +++ F   + RIV+G TK+ K+ K + K E       +A++ R++F+
Sbjct: 78  DVIEDTSY-TFEDVKDMFNEEIARIVDGVTKLKKV-KYRSKEEQ------QAENHRKLFI 129

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           A+ ++VRVI+VKLADRLHNMRTL  MP  KQ  I+ ETL+++APLA  LG+  IK ELE+
Sbjct: 130 AIAKDVRVILVKLADRLHNMRTLKAMPREKQVRISKETLEIYAPLAHRLGINTIKWELED 189

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
            +  Y ++  Y     R+ +L K+   E E      + KI+++  +  M +  EI    K
Sbjct: 190 TALRYIDSVQYF----RIVNLMKKKRSEREAYITNAINKIKNE--MTKMNLSGEINGRPK 243

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIY+ ++K +   +++  +  +RII+            +    CY  LGLVH +W P
Sbjct: 244 HIYSIYRKMIKQKKQFDQIFDLLAIRIIV------------NSINDCYATLGLVHTLWKP 291

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PK N YQSLHTT++     +   LE+QIRT EM  IAE G+AAH++ + 
Sbjct: 292 MPGRFKDYIAMPKQNMYQSLHTTVVG---PNGDPLEIQIRTHEMHEIAEHGVAAHWAYK- 347

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                            GKTV     +   +++WL   +E  E    +  ++EF++++  
Sbjct: 348 ----------------EGKTVNQKTQDFQNKLNWL---KELAETDHTSADAQEFMESLKY 388

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           DL   +V+ FTP  ++  LP GA  +D+AY IH+E+GNKM+ AKVNG +V   +VL   +
Sbjct: 389 DLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPIDYVLQTGD 448

Query: 619 VVEIITYNVSF 629
           ++EI T   S+
Sbjct: 449 IIEIRTSKHSY 459


>gi|332686842|ref|YP_004456616.1| GTP pyrophosphokinase [Melissococcus plutonius ATCC 35311]
 gi|332370851|dbj|BAK21807.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Melissococcus
           plutonius ATCC 35311]
          Length = 739

 Score =  334 bits (857), Expect = 7e-89,   Method: Compositional matrix adjust.
 Identities = 188/491 (38%), Positives = 287/491 (58%), Gaps = 49/491 (9%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y+    + LV++AL  A +AH+GQ R+SGEP+IIHP++VA IL +L +D  ++A G LHD
Sbjct: 19  YMGSEHVALVKKALDYASQAHEGQIRKSGEPYIIHPIQVAGILADLHMDPYTVATGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            VEDT + T + +++EFG ++  +V+G   V+KLGK+K K+    +    A++ R+M LA
Sbjct: 79  VVEDTEI-TLDDLKDEFGESIAVLVDG---VTKLGKIKYKSHEEQL----AENHRKMLLA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M +++RVI+VKLADRLHNMRTL ++   KQ  IA ETL+++APLA  LG+ ++K ELE+ 
Sbjct: 131 MAQDLRVILVKLADRLHNMRTLKYLREDKQRRIAKETLEIYAPLAHRLGISRVKWELEDT 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           +  Y N   Y ++      ++    K +E  + I     E     + + +  EI    K 
Sbjct: 191 ALRYINPNQYYRI------VHLMQSKRIERESYIAQAVDEICYVTNELGISAEIYGRPKH 244

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIY+ +   +   NE+  +  +R+II               + CY VLG +H  W P+
Sbjct: 245 IYSIYRKMKDQKKQFNEIYDLLAIRVII------------DSIKDCYAVLGAIHTKWMPM 292

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK N YQS+HTT+I  +      +E+QIRT EM  IAE G+AAH++ +  
Sbjct: 293 PGRFKDYIAMPKTNMYQSIHTTVIGPMGNP---IEIQIRTREMHKIAEFGVAAHWAYK-- 347

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
                           GK   L + +++ ++ W   I E Q+E   +  + EF++++  D
Sbjct: 348 ---------------EGKADRLKSNDLSKQLDWFREIVELQDE---SYNASEFMESVKGD 389

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           +   +V+VFTP GE+  LPKG+  +D+AY IHTEIGNK   AKVNG +V   + L N ++
Sbjct: 390 IFSDKVYVFTPNGEVSELPKGSGPLDFAYNIHTEIGNKTTGAKVNGKIVQLDYPLKNGDI 449

Query: 620 VEIITYNVSFS 630
           +E++T   SF 
Sbjct: 450 IEVLTSANSFG 460


>gi|406577350|ref|ZP_11052962.1| GTP pyrophosphokinase [Streptococcus sp. GMD6S]
 gi|404460045|gb|EKA06336.1| GTP pyrophosphokinase [Streptococcus sp. GMD6S]
          Length = 738

 Score =  334 bits (857), Expect = 7e-89,   Method: Compositional matrix adjust.
 Identities = 191/494 (38%), Positives = 294/494 (59%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YLS  ++  V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD  ++A G 
Sbjct: 16  TQKYLSKEDVAFVHKALVYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT+  T + +E+EFG  VR IV+G   V+KLGK++ K    S+++  A++ R+M
Sbjct: 76  LHDVVEDTDA-TLDDLEQEFGHDVRIIVDG---VTKLGKVEYK----SIEEQLAENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM+E++RVI+VKL+DRLHNMRTL+H+   KQ  I+ ET++++APLA  LG+  +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLNHLRKDKQERISRETMEIYAPLAHRLGISSVKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y N  ++ K+   + +  +E E  ++E    ++ K+ED  +     +K +I   
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLED--YTSERNLKGKIYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSIY+ +   +    E+  +  +R I++                 Y +LG VH +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFEEIYDLIAIRCILE------------THSDVYAMLGYVHELW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA  K NGYQS+HTT    +Y     +E QIRT+EM  +AE G+AAH++ 
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  + G V                 N+   A+ ++W+  + E Q++      ++EFVD++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMIELQDQ---ADDAKEFVDSV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             + L   ++VFTP G +++LPK +  +D+AY IHT++G K   AKVNG +V  T  L  
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445

Query: 617 AEVVEIITYNVSFS 630
            + VEI+T   SF 
Sbjct: 446 GDQVEIVTNPNSFG 459


>gi|322388258|ref|ZP_08061862.1| GTP diphosphokinase [Streptococcus infantis ATCC 700779]
 gi|419844284|ref|ZP_14367580.1| GTP diphosphokinase [Streptococcus infantis ATCC 700779]
 gi|321140930|gb|EFX36431.1| GTP diphosphokinase [Streptococcus infantis ATCC 700779]
 gi|385701999|gb|EIG39153.1| GTP diphosphokinase [Streptococcus infantis ATCC 700779]
          Length = 738

 Score =  334 bits (857), Expect = 7e-89,   Method: Compositional matrix adjust.
 Identities = 193/494 (39%), Positives = 293/494 (59%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YLS  ++  V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD  ++A G 
Sbjct: 16  TQKYLSKEDVAFVHKALVYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT+  T + +E EFG  VR IV+G   V+KLGK++ K    S+++  A++ R+M
Sbjct: 76  LHDVVEDTDA-TLDDLEREFGHDVRVIVDG---VTKLGKVEYK----SIEEQLAENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM+E++RVI+VKL+DRLHNMRTL+H+   KQ  I+ ET++++APLA  LG+  +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLTHLRKDKQERISRETMEIYAPLAHRLGISSVKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y N  ++ K+   + +  +E E  ++E    ++ K+E  ++     +  +I   
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRQEREALVDE----VVTKLE--EYSSERNLTGKIYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSIY+ +   +    E+  +  +R I+              Q   Y +LG VH +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHELW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA  K NGYQS+HTT    +Y     +E QIRT+EM  +AE G+AAH++ 
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWA- 344

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
             +  G+ G               +N+   A+ ++W+  + E Q++      ++EFVDT+
Sbjct: 345 --YKKGMKGQ--------------VNSKESAIGMNWIKEMMELQDQ---ADDAKEFVDTV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             + L   ++VFTP G +++LPK +  +D+AY IHT+IG K   AKVNG +V  T  L  
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKIGEKATGAKVNGRMVPLTTKLKT 445

Query: 617 AEVVEIITYNVSFS 630
            + VEIIT   SF 
Sbjct: 446 GDQVEIITNPNSFG 459


>gi|450010915|ref|ZP_21828877.1| putative stringent response protein [Streptococcus mutans A19]
 gi|450023600|ref|ZP_21830715.1| putative stringent response protein [Streptococcus mutans U138]
 gi|449189902|gb|EMB91522.1| putative stringent response protein [Streptococcus mutans A19]
 gi|449193207|gb|EMB94598.1| putative stringent response protein [Streptococcus mutans U138]
          Length = 740

 Score =  334 bits (857), Expect = 7e-89,   Method: Compositional matrix adjust.
 Identities = 189/491 (38%), Positives = 287/491 (58%), Gaps = 49/491 (9%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++  ++  V++AL  A E H GQ R+SGEP+IIHP++VA IL +L LD  +++ G LHD
Sbjct: 19  YMNKADIAFVQKALDYATECHSGQFRKSGEPYIIHPIQVAGILADLHLDAITVSCGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            +EDT   T + +E +FG+ V+ IV+G   V+KLGK++ K+    +    A++ R+M +A
Sbjct: 79  VIEDTEA-TLDHLEAKFGSDVKNIVDG---VTKLGKVEYKSHEEQL----AENHRKMLMA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M++++RVI+VKLADRLHNMRTL H+   KQ  I+ ET++++APLA  LG+ +IK ELE+L
Sbjct: 131 MSKDIRVILVKLADRLHNMRTLRHLRKDKQERISRETMEIYAPLAHRLGISRIKWELEDL 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           +F Y N  ++ K    ++ L  E  +E E     ++ KI+   +     +  EI    K 
Sbjct: 191 AFRYLNEVEFYK----ISHLMNEKRREREALVDDIVDKIK--AYTAEQGLHGEIYGRPKH 244

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIY+ +   +   +++  +  +R I+              Q   Y +LG +H +W P+
Sbjct: 245 IYSIYRKMRDKKKRFDQIYDLIAIRCIL------------DTQSDVYAMLGYIHELWRPM 292

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK NGYQS+HTT    +Y     +EVQIRT EM  +AE G+AAH++ +  
Sbjct: 293 PGRFKDYIANPKANGYQSIHTT----VYGPKGPIEVQIRTHEMHQVAEYGVAAHWAYKKG 348

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
           + G V                 N+   AL ++W+  + E Q+   GN    +FVD++  D
Sbjct: 349 IKGKV-----------------NSQESALGMNWIKELVELQDASNGNAV--DFVDSVKED 389

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           +   R++VFTP G ++ LPK +  +D+AY IHT++G K   AKVNG +V  T  L    V
Sbjct: 390 IFAERIYVFTPNGAVQELPKDSGPIDFAYAIHTQVGEKATGAKVNGRMVPLTAKLKTGNV 449

Query: 620 VEIITYNVSFS 630
           VEIIT + SF 
Sbjct: 450 VEIITNSNSFG 460


>gi|218441725|ref|YP_002380054.1| (p)ppGpp synthetase I SpoT/RelA [Cyanothece sp. PCC 7424]
 gi|218174453|gb|ACK73186.1| (p)ppGpp synthetase I, SpoT/RelA [Cyanothece sp. PCC 7424]
          Length = 749

 Score =  334 bits (857), Expect = 8e-89,   Method: Compositional matrix adjust.
 Identities = 208/502 (41%), Positives = 291/502 (57%), Gaps = 56/502 (11%)

Query: 127 PERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELE 186
           P+ L E L    S     +L L+ RA   A+E H GQ R+SGEP+I HPV VA +L +L 
Sbjct: 21  PQWLTECLLTYQSSQEQEDLSLICRAFNFAYELHRGQYRKSGEPYIAHPVAVAGLLRDLG 80

Query: 187 LDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQ 246
            D   IAAG LHD VEDT V T E IEE FG  VR++VEG TK+SK      K E     
Sbjct: 81  GDSTMIAAGFLHDVVEDTEV-TLEEIEERFGLEVRQLVEGVTKLSKFN-FSSKTER---- 134

Query: 247 DVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKL 306
             +A++ R+MFLAM +++RVI+VKLADRLHNMRTL H+ P KQ  IA ET ++FAPLA  
Sbjct: 135 --QAENFRRMFLAMAKDIRVIVVKLADRLHNMRTLEHLAPEKQCRIALETREIFAPLANR 192

Query: 307 LGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDL 366
           LG+ + K ELE+L F Y   E Y +++  VA+   + E  +++ ++ L ++      L  
Sbjct: 193 LGIGRFKWELEDLCFKYLEPEAYREIQTLVAEKRVDRETRIDKISETLRER------LYQ 246

Query: 367 MTVKT-EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQIC 425
           + VK  EI+   K  Y IY  + +     +E+  IA LRI+++ K            + C
Sbjct: 247 IGVKVLEIQGRPKHLYGIYDKMQRQHKEFHEIYDIAALRILVETK------------EEC 294

Query: 426 YHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLI 485
           Y  L +VH ++ PIP   KDYI  PKPN YQSLHTT++     +   LEVQIRT EM  I
Sbjct: 295 YRALAIVHDVFKPIPGRFKDYIGLPKPNRYQSLHTTVVGL---NCRPLEVQIRTLEMHHI 351

Query: 486 AERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVG 545
           AE GIAAH+  +   TG             G T  + + +   + +WL  + EWQ +   
Sbjct: 352 AEYGIAAHWKYK--ETG-------------GSTYNITSED--EKFTWLRQLIEWQNDL-- 392

Query: 546 NMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNG 605
              ++E+++++  +L    V+VFTP+G++  L +GAT VD+AY IHTE+G+ M  A++NG
Sbjct: 393 -KDAQEYIESLKDNLFEDDVYVFTPQGDVIALARGATAVDFAYRIHTEVGHHMKGARING 451

Query: 606 N---LVSPTHVLANAEVVEIIT 624
               L +P H   N ++VEIIT
Sbjct: 452 RWSVLDTPLH---NGDIVEIIT 470


>gi|428779441|ref|YP_007171227.1| RelA/SpoT family (p)ppGpp synthetase [Dactylococcopsis salina PCC
           8305]
 gi|428693720|gb|AFZ49870.1| (p)ppGpp synthetase, RelA/SpoT family [Dactylococcopsis salina PCC
           8305]
          Length = 762

 Score =  334 bits (857), Expect = 8e-89,   Method: Compositional matrix adjust.
 Identities = 194/480 (40%), Positives = 276/480 (57%), Gaps = 47/480 (9%)

Query: 145 ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDT 204
           ++ L+  A   A+E H+GQ RRSGEP+I HPV VA ++ +L      I AG LHD VEDT
Sbjct: 44  DVALIADAFQFAYELHEGQYRRSGEPYIAHPVAVAGLIRDLGGGSAMIGAGFLHDIVEDT 103

Query: 205 NVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEV 264
            V T E IEE FG +VR +VEG TK+SK      K E       +A++ R+MFLAM +++
Sbjct: 104 EV-TCEEIEERFGESVRHLVEGVTKLSKFN-FSSKTER------QAENFRRMFLAMAKDI 155

Query: 265 RVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYT 324
           RVI+VKLADRLHNMRTL H+ P KQ  IA ET ++FAPLA  LG+   K ELE+LSF Y 
Sbjct: 156 RVIVVKLADRLHNMRTLQHLKPEKQKQIALETREIFAPLANRLGIGSFKWELEDLSFKYL 215

Query: 325 NAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIY 384
             E + +++  VAD   + EK ++   + L K+  D   +++     E++   K  Y IY
Sbjct: 216 EPEAFQEIRELVADRRTDREKRIQTVTEALQKRF-DQGGIEV----EELKGRPKHLYGIY 270

Query: 385 KAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMK 444
           + + + + +  E+  +A +R+I+K +            + CY  L ++H  + PIP   K
Sbjct: 271 QKMQQQQKTFAEIYDLAGVRVILKTR------------EDCYRALAIIHDEFKPIPGRFK 318

Query: 445 DYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLV 504
           DYI  PKPN YQSLHTT+I    +    +E+QIRT EM  IAE GIAAH+  +       
Sbjct: 319 DYIGLPKPNRYQSLHTTVIGGYGKP---IEMQIRTLEMHYIAEYGIAAHWLYK------- 368

Query: 505 GHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSR 564
                      G T          + +WL  + EWQ +      ++E++++I  +L    
Sbjct: 369 ---------ETGGTSDFKFTAEDEKFTWLRQLLEWQNDL---KDAQEYIESIRDNLFEDD 416

Query: 565 VFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
           VFVFTP+G++  L +GAT VD+AY IHTE+GN +  A+VNG+       L N ++VEIIT
Sbjct: 417 VFVFTPQGDVVALSRGATPVDFAYHIHTEVGNHIKGARVNGSWTVLDTALKNGDIVEIIT 476


>gi|322386285|ref|ZP_08059916.1| GTP diphosphokinase [Streptococcus cristatus ATCC 51100]
 gi|321269652|gb|EFX52581.1| GTP diphosphokinase [Streptococcus cristatus ATCC 51100]
          Length = 739

 Score =  334 bits (857), Expect = 8e-89,   Method: Compositional matrix adjust.
 Identities = 192/494 (38%), Positives = 289/494 (58%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YL+  ++  V++AL+ A E H GQ R+SGEP+I+HP++VA IL +L+LD  S+A G 
Sbjct: 16  TKKYLAAEDVAFVQKALIYAMECHSGQTRKSGEPYIVHPIQVAGILAKLKLDAVSVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT   T + +E EFG  VR IV+G   V+KLGK+K K+    +    A++ R+M
Sbjct: 76  LHDVVEDT-AATLDDLEREFGHDVRVIVDG---VTKLGKVKYKSHEEQL----AENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM+E++RVI+VKLADRLHNMRTL+H+ P KQ  I  ET++++APLA  LG+  +K EL
Sbjct: 128 LMAMSEDLRVILVKLADRLHNMRTLNHLRPDKQERILQETMEIYAPLAHRLGISSVKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y N  ++ K+   + +  +E E  +EE    ++ KIE   +     +  +I   
Sbjct: 188 EDLSFRYLNPTEFYKISHMMKEKRREREALVEE----VVHKIE--TYAGERNLHGKIYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSIY+ +   +   +E+  +  +R I+            S     Y +LG +H +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFDEIYDLIAIRCIL------------STHSDVYAMLGYIHELW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA  K NGYQS+HTT    +Y     +E QIRT+EM  +AE G+AAH++ 
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  + G V     +G+              A+ ++W+  + E Q +   +  ++EFVD++
Sbjct: 346 KKGIKGQV-----DGKES------------AIGMNWIKELMELQNQ---SGDAKEFVDSV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
               L   ++VFTP G +++LPK +  +D+AY IHT++G K   AKVNG +V     L  
Sbjct: 386 KESYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLNTKLKT 445

Query: 617 AEVVEIITYNVSFS 630
            + VEIIT   SF 
Sbjct: 446 GDQVEIITNANSFG 459


>gi|295428209|ref|ZP_06820841.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus EMRSA16]
 gi|295128567|gb|EFG58201.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus EMRSA16]
          Length = 736

 Score =  334 bits (857), Expect = 8e-89,   Method: Compositional matrix adjust.
 Identities = 193/498 (38%), Positives = 293/498 (58%), Gaps = 49/498 (9%)

Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
           E L    SYLS +E E V ++  +A+EAH GQ R++G P+I+HP++VA IL E+ LD  +
Sbjct: 18  EVLHKAKSYLSADEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPT 77

Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
           I AG LHD +EDT+  TFE ++E F   V RIV+G TK+ K+ K + K E       +A+
Sbjct: 78  IVAGFLHDVIEDTSY-TFEDVKEMFNEEVARIVDGVTKLKKV-KYRSKEEQ------QAE 129

Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
           + R++F+A+ ++VRVI+VKLADRLHNMRTL  MP  KQ  I+ ETL+++APLA  LG+  
Sbjct: 130 NHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIYAPLAHRLGINT 189

Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
           IK ELE+ +  Y +   Y     R+ +L K+   E E   +  + +I  +  +D M ++ 
Sbjct: 190 IKWELEDTALRYIDNVQYF----RIVNLMKKKRSEREAYIETAIDRIRTE--MDRMNIEG 243

Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
           +I    K  YSIY+ ++K +   +++  +  +R+I+            +    CY +LGL
Sbjct: 244 DINGRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV------------NSINDCYAILGL 291

Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
           VH +W P+P   KDYIA PK N YQSLHTT++     +   LE+QIRT +M  IAE G+A
Sbjct: 292 VHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVVG---PNGDPLEIQIRTFDMHEIAEHGVA 348

Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
           AH++ +                  GK V   +     +++WL   +E  E    +  ++E
Sbjct: 349 AHWAYK-----------------EGKKVSEKDQTYQNKLNWL---KELAEADHTSSDAQE 388

Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
           F++T+  DL   +V+ FTP  ++  LP GA  +D+AY IH+E+GNKM+ AKVNG +V   
Sbjct: 389 FMETLKYDLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPID 448

Query: 612 HVLANAEVVEIITYNVSF 629
           ++L   ++VEI T   S+
Sbjct: 449 YILQTGDIVEIRTSKHSY 466


>gi|154482685|ref|ZP_02025133.1| hypothetical protein EUBVEN_00361 [Eubacterium ventriosum ATCC
           27560]
 gi|149736461|gb|EDM52347.1| RelA/SpoT family protein [Eubacterium ventriosum ATCC 27560]
          Length = 759

 Score =  334 bits (857), Expect = 8e-89,   Method: Compositional matrix adjust.
 Identities = 201/512 (39%), Positives = 291/512 (56%), Gaps = 64/512 (12%)

Query: 126 SPERLWEDLRPTISYLSPN--ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILG 183
           +PE L+  L   I    P+  +L  + +A   A ++H  QKR+SGEP+IIHP+  A IL 
Sbjct: 25  TPEELYSRLIDKIKRYHPSAGDLSAIDKAYNFAKKSHGDQKRKSGEPYIIHPIHTALILA 84

Query: 184 ELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENH 243
           +LELD ESI AGLLHD +EDT V T E++  EFG  V  +V+G TK++KL     K E  
Sbjct: 85  DLELDKESIMAGLLHDVMEDTKV-TREQMISEFGEEVTDLVDGVTKLTKLDYDADKVEK- 142

Query: 244 SVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPL 303
                +A++LR+MFLAM +++RVI++KLADRLHNMRTL +M P KQ   + ET++++AP+
Sbjct: 143 -----QAENLRKMFLAMAKDIRVILIKLADRLHNMRTLQYMTPEKQKEKSKETMEIYAPI 197

Query: 304 AKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQF 363
           A  LG+ +IK EL++L+  Y   E Y  +   V  L  EH +E       L+ ++    +
Sbjct: 198 ADRLGISKIKIELDDLALRYLEPEKYKDLVDGVH-LRLEHREEFMSQ---LIAEVAG--Y 251

Query: 364 LDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQ 423
           ++   +K  I    K  +SIYK ++    +++++  +  +RII+                
Sbjct: 252 IEKAGIKATIDGRVKHYFSIYKKMVNQHKTLDQIYDVFAIRIIV------------DTVM 299

Query: 424 ICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIR 478
            CY  LG++H  +TP+P   KDYIA PK N YQSLHTTLI     PF        E+QIR
Sbjct: 300 ECYGALGVIHEKYTPVPGRFKDYIAMPKQNMYQSLHTTLIGPNGQPF--------EIQIR 351

Query: 479 TEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIRE 538
           T EM   AE GIAAH+  +  +TG                      N   +ISWL  I E
Sbjct: 352 TMEMHKTAEYGIAAHWKYKENITG-------------------EGDNEEQKISWLRQILE 392

Query: 539 WQEEFVGNMTSREFVDTITRDL--LGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGN 596
           WQ +   N    EF++ +  DL      V+ FTP G++K+LP G+T +D+AY IH+ +GN
Sbjct: 393 WQRDLSDN---HEFLNLLKDDLNMFSENVYCFTPNGDLKSLPNGSTPIDFAYSIHSAVGN 449

Query: 597 KMVAAKVNGNLVSPTHVLANAEVVEIITYNVS 628
           KMV A+VNG +V+  + + N + VE++T N S
Sbjct: 450 KMVGARVNGKMVNIDYKIQNGDQVEVVTSNNS 481


>gi|406838606|ref|ZP_11098200.1| GTP pyrophosphokinase [Lactobacillus vini DSM 20605]
          Length = 740

 Score =  334 bits (857), Expect = 8e-89,   Method: Compositional matrix adjust.
 Identities = 197/490 (40%), Positives = 284/490 (57%), Gaps = 59/490 (12%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++   +ELV++A   A   H  Q+R+SGEP+I+HP++VA IL  L++D  ++ AG LHD
Sbjct: 19  YMNQKHVELVKKAYNFAAYVHKNQRRQSGEPYIMHPIQVAGILANLKMDPATVCAGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            VEDTNV T   + E FG  V  IV+G   V+KL K++ K    S Q+  A++ R++ LA
Sbjct: 79  VVEDTNV-TLGDVGELFGHDVEVIVDG---VTKLSKIRYK----SHQEQLAENHRKLLLA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M++++RVIIVKLADRLHNMRTL+H+ P KQ  IA ETL+++APLA  LG+  IK ELE++
Sbjct: 131 MSKDLRVIIVKLADRLHNMRTLNHLRPDKQRRIANETLEIYAPLADRLGISTIKWELEDI 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           S  Y N + Y ++   +     E    +  A + +   I D      + +  EI    K 
Sbjct: 191 SLRYLNPQQYYRIVHLMNSKRAERVAYINRAIEEIKGAIAD------LHLNCEIYGRPKH 244

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIY+ +       +++  +  +R+I+            +  + CY VLG +H  W P+
Sbjct: 245 IYSIYRKMKDQHKQFSQIYDLLAVRVIV------------NSIKDCYAVLGAIHTKWKPM 292

Query: 440 PRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMDLIAERGIAAHY 494
           P   KDYIA PK N YQSLHTT+I     PF        EVQIRTEEM  +AE G+AAH+
Sbjct: 293 PGRFKDYIAMPKANMYQSLHTTVIGPAGKPF--------EVQIRTEEMHRVAEYGVAAHW 344

Query: 495 SGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVD 554
           + +                  GKT  +       +++W   I E Q+E   +  + EF++
Sbjct: 345 AYK-----------------EGKTNGVKPDKTGNKLNWFKEIVELQDE---SNDAAEFME 384

Query: 555 TITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVL 614
           ++  DL G RV+VFTP+G++  LPKGA  +D AY IHTEIGNK V AKVNG +V   + +
Sbjct: 385 SVKGDLFGDRVYVFTPKGDVLELPKGAGPLDMAYSIHTEIGNKTVGAKVNGKIVPLDYQI 444

Query: 615 ANAEVVEIIT 624
            N E+V+I+T
Sbjct: 445 KNGEIVDILT 454


>gi|420177943|ref|ZP_14684277.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM057]
 gi|420179188|ref|ZP_14685487.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM053]
 gi|394247130|gb|EJD92378.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM057]
 gi|394254263|gb|EJD99234.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM053]
          Length = 729

 Score =  334 bits (857), Expect = 8e-89,   Method: Compositional matrix adjust.
 Identities = 191/491 (38%), Positives = 291/491 (59%), Gaps = 49/491 (9%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           SYLS +E E V ++  +A+EAH GQ R++G P+I+HP++VA IL E+ LD  +I AG LH
Sbjct: 18  SYLSTSEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPTIVAGFLH 77

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D +EDT+  TFE +++ F   + RIV+G TK+ K+ K + K E       +A++ R++F+
Sbjct: 78  DVIEDTSY-TFEDVKDMFNEEIARIVDGVTKLKKV-KYRSKEEQ------QAENHRKLFI 129

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           A+ ++VRVI+VKLADRLHNMRTL  MP  KQ  I+ ETL+++APLA  LG+  IK ELE+
Sbjct: 130 AIAKDVRVILVKLADRLHNMRTLKAMPREKQVRISKETLEIYAPLAHRLGINTIKWELED 189

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
            +  Y ++  Y     R+ +L K+   E E      + KI+++  +  M +  EI    K
Sbjct: 190 TALRYIDSVQYF----RIVNLMKKKRSEREAYITNAINKIKNE--MTKMNLSGEINGRPK 243

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIY+ ++K +   +++  +  +RII+            +    CY  LGLVH +W P
Sbjct: 244 HIYSIYRKMIKQKKQFDQIFDLLAIRIIV------------NSINDCYATLGLVHTLWKP 291

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PK N YQSLHTT++     +   LE+QIRT EM  IAE G+AAH++ + 
Sbjct: 292 MPGRFKDYIAMPKQNMYQSLHTTVVG---PNGDPLEIQIRTHEMHEIAEHGVAAHWAYK- 347

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                            GKTV     +   +++WL   +E  E    +  ++EF++++  
Sbjct: 348 ----------------EGKTVNQKTQDFQNKLNWL---KELAETDHTSADAQEFMESLKY 388

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           DL   +V+ FTP  ++  LP GA  +D+AY IH+E+GNKM+ AKVNG +V   ++L   +
Sbjct: 389 DLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPIDYILQTGD 448

Query: 619 VVEIITYNVSF 629
           ++EI T   S+
Sbjct: 449 IIEIRTSKHSY 459


>gi|314938569|ref|ZP_07845853.1| GTP diphosphokinase [Enterococcus faecium TX0133a04]
 gi|314952050|ref|ZP_07855073.1| GTP diphosphokinase [Enterococcus faecium TX0133A]
 gi|314995190|ref|ZP_07860304.1| GTP diphosphokinase [Enterococcus faecium TX0133a01]
 gi|313590599|gb|EFR69444.1| GTP diphosphokinase [Enterococcus faecium TX0133a01]
 gi|313595840|gb|EFR74685.1| GTP diphosphokinase [Enterococcus faecium TX0133A]
 gi|313642126|gb|EFS06706.1| GTP diphosphokinase [Enterococcus faecium TX0133a04]
          Length = 737

 Score =  334 bits (857), Expect = 9e-89,   Method: Compositional matrix adjust.
 Identities = 193/493 (39%), Positives = 287/493 (58%), Gaps = 51/493 (10%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
            Y+ P  +  V +A   A  AHDGQ R+SGEP+IIHP++VA IL +L++D  ++A G LH
Sbjct: 18  QYMGPEHVAFVEKACEYATAAHDGQFRKSGEPYIIHPIQVAGILADLKMDPHTVATGFLH 77

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT + T E + EEFG  V  +V+G   V+KLGK+K K+    +    A++ R+M L
Sbjct: 78  DVVEDTEI-TLEDLREEFGDDVAMLVDG---VTKLGKIKYKSHEEQL----AENHRKMLL 129

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM +++RVI+VKLADRLHNMRTL H+   KQ  IA ETL+++APLA  LG+ +IK ELE+
Sbjct: 130 AMAQDLRVIMVKLADRLHNMRTLKHLREDKQRRIAQETLEIYAPLAHRLGISRIKWELED 189

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQF-LDLMTVKTEIRSVC 377
            +  Y N + Y ++   +       + + EE  K +   +ED +   + + +  EI    
Sbjct: 190 TALRYLNPKQYYRIVHLM-------QTKREEREKYVSGTVEDIRIATEELGIFAEIYGRP 242

Query: 378 KEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWT 437
           K  YSIY+ +   +   NE+  +  +R+I+               + CY VLG +H  W 
Sbjct: 243 KHIYSIYRKMKDQKKQFNEIYDLLAIRVIV------------DSIKDCYAVLGAIHTKWK 290

Query: 438 PIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGR 497
           P+P   KDYIA PK N YQSLHTT+I     +   +E+QIRT+EM  IAE G+AAH++  
Sbjct: 291 PMPGRFKDYIAMPKANMYQSLHTTVIG---PAGNPVEIQIRTQEMHEIAEFGVAAHWA-- 345

Query: 498 VFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTIT 557
            +  G      P+G              +  ++S  + I E Q+E   +  + EF++ + 
Sbjct: 346 -YKEGKNEKVEPDG--------------MTKQLSSFHEILELQDE---SYDASEFMEGVK 387

Query: 558 RDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANA 617
            D+   +V+VFTP+G++  LPKG+  +D+AY IHT+IGNK   AKVNG +V   + L N 
Sbjct: 388 GDIFSDKVYVFTPKGDVTELPKGSGPLDFAYSIHTDIGNKTTGAKVNGKMVQLDYKLKNG 447

Query: 618 EVVEIITYNVSFS 630
           +++EI+T   SF 
Sbjct: 448 DIIEIMTSPNSFG 460


>gi|385260670|ref|ZP_10038813.1| GTP diphosphokinase [Streptococcus sp. SK140]
 gi|385190913|gb|EIF38341.1| GTP diphosphokinase [Streptococcus sp. SK140]
          Length = 738

 Score =  334 bits (856), Expect = 9e-89,   Method: Compositional matrix adjust.
 Identities = 195/494 (39%), Positives = 291/494 (58%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YLS  ++  V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD  ++A G 
Sbjct: 16  TQKYLSKEDVAFVHKALVYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT+  T + +E EFG  VR IV+G   V+KLGK++ K    S+++  A++ R+M
Sbjct: 76  LHDVVEDTDA-TLDDLEREFGHDVRVIVDG---VTKLGKVEYK----SIEEQLAENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM+E++RVI+VKL+DRLHNMRTL H+   KQ  I+ ET++++APLA  LG+  +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISSVKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y N  ++ K+   + +  +E E  ++E    ++ K+E+      +T K  I   
Sbjct: 188 EDLSFRYLNPTEFYKISHMMKEKRQEREALVDE----VVTKLEEYSSERHLTGK--IYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSIY+ +   +    E+  +  +R I+              Q   Y +LG VH +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHELW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA  K NGYQS+HTT    +Y     +E QIRT+EM  +AE G+AAH++ 
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  + G V                 N+   A+ ++W+  + E Q++      ++EFVDT+
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDTV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             + L   ++VFTP G +++LPK +  +D+AY IHT+IG K   AKVNG +V  T  L  
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKIGEKATGAKVNGRMVPLTTKLKT 445

Query: 617 AEVVEIITYNVSFS 630
            + VEIIT   SF 
Sbjct: 446 GDQVEIITNPNSFG 459


>gi|398813763|ref|ZP_10572455.1| (p)ppGpp synthetase, RelA/SpoT family [Brevibacillus sp. BC25]
 gi|398038063|gb|EJL31236.1| (p)ppGpp synthetase, RelA/SpoT family [Brevibacillus sp. BC25]
          Length = 723

 Score =  334 bits (856), Expect = 9e-89,   Method: Compositional matrix adjust.
 Identities = 194/498 (38%), Positives = 292/498 (58%), Gaps = 50/498 (10%)

Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
           E ++   +YLS ++++L+ RA  LA +AH+GQ R+SG P+I+HP+ VA IL  L +D  +
Sbjct: 7   EIVKKASTYLSQSDMDLITRAYQLAEKAHEGQIRKSGVPYIMHPIAVAGILANLHMDAVT 66

Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
           IAAG LHD VEDT + T + + E+FG  V  +V+G TK+ K+ K K K E        A+
Sbjct: 67  IAAGFLHDVVEDTEI-TLDHLREQFGPDVALLVDGVTKLEKI-KYKSKEEQ------LAE 118

Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
           + R+M +AM +++RVI++KLADRLHNMRTL HM   KQ  I+ ETL++FAPLA  LG+  
Sbjct: 119 NHRKMLVAMAQDIRVIMIKLADRLHNMRTLRHMSEEKQREISDETLEIFAPLAHRLGIAS 178

Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
           +K ELE+ +  Y N + Y ++   +     E E  L EA+  + +K+ +      + ++ 
Sbjct: 179 VKWELEDTALRYLNPQQYYRIVNLMQKKRVEREAYLNEASDTIREKLGE------LNIEA 232

Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
           EI    K  YSI+K + +     NE+  +  LRII+            +  + CY VLG+
Sbjct: 233 EISGRPKHIYSIFKKMTRQNKQFNEIYDLLALRIIV------------NDIRDCYAVLGI 280

Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
           VH +W P+P   KDYIA PK N YQSLHTT+I    E    LEVQIRT +M   AE GIA
Sbjct: 281 VHTLWKPMPGRFKDYIAMPKTNMYQSLHTTVIGPKGEP---LEVQIRTWDMHQTAEIGIA 337

Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
           AH++ +                  GK++     + A ++  L  I E   E   N  ++E
Sbjct: 338 AHWAYK-----------------EGKSIV--QGSFAEKLGSLREIIEGGSEEAPN--AQE 376

Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
           F++++ +DL    VFVFTP+G++  LPKG+  +D++Y IH+ +GN+ + AKVNG +V   
Sbjct: 377 FMESLKQDLFSDTVFVFTPKGDVVELPKGSVPLDFSYRIHSAVGNRTIGAKVNGKIVPLD 436

Query: 612 HVLANAEVVEIITYNVSF 629
           + +   ++VEI+T   S+
Sbjct: 437 YAMKTGDIVEILTSKHSY 454


>gi|417937865|ref|ZP_12581165.1| RelA/SpoT family protein [Streptococcus infantis SK970]
 gi|343392129|gb|EGV04702.1| RelA/SpoT family protein [Streptococcus infantis SK970]
          Length = 738

 Score =  334 bits (856), Expect = 9e-89,   Method: Compositional matrix adjust.
 Identities = 195/494 (39%), Positives = 291/494 (58%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YLS  ++  V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD  ++A G 
Sbjct: 16  TQKYLSKEDVAFVHKALVYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT+  T + +E EFG  VR IV+G   V+KLGK++ K    S+++  A++ R+M
Sbjct: 76  LHDVVEDTDA-TLDDLEREFGHDVRVIVDG---VTKLGKVEYK----SIEEQLAENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM+E++RVI+VKL+DRLHNMRTL H+   KQ  I+ ET++++APLA  LG+  +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISSVKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y N  ++ K+   + +  +E E  ++E    ++ K+E+      +T K  I   
Sbjct: 188 EDLSFRYLNPTEFYKISHMMKEKRQEREALVDE----VVTKLEEYSSERHLTGK--IYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSIY+ +   +    E+  +  +R I+              Q   Y +LG VH +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHELW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA  K NGYQS+HTT    +Y     +E QIRT+EM  +AE G+AAH++ 
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  + G V                 N+   A+ ++W+  + E Q++      ++EFVDT+
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDTV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             + L   ++VFTP G +++LPK +  +D+AY IHT+IG K   AKVNG +V  T  L  
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKIGEKATGAKVNGRMVPLTTKLKT 445

Query: 617 AEVVEIITYNVSFS 630
            + VEIIT   SF 
Sbjct: 446 GDQVEIITNPNSFG 459


>gi|421532508|ref|ZP_15978869.1| GTP pyrophosphokinase [Streptococcus agalactiae STIR-CD-17]
 gi|403642300|gb|EJZ03157.1| GTP pyrophosphokinase [Streptococcus agalactiae STIR-CD-17]
          Length = 738

 Score =  334 bits (856), Expect = 9e-89,   Method: Compositional matrix adjust.
 Identities = 190/494 (38%), Positives = 293/494 (59%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  Y+S  ++  V+ AL  A  AH  Q R+SGEP+IIHP++VA IL +L LD  ++A G 
Sbjct: 16  TSQYMSETDVAFVKFALNYATAAHYYQARKSGEPYIIHPIQVAGILADLHLDAVTVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT + T + IE +FG  VR I++G   V+KLGK++ K+    +    A++ R+M
Sbjct: 76  LHDVVEDTEI-TLDEIETDFGKDVRDIIDG---VTKLGKVEYKSHEEQL----AENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM++++RVI+VKLADRLHNMRTL H+   KQ  I+ ET++++APLA  LG+ +IK EL
Sbjct: 128 LMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y N  ++ K    ++ +  E  +E EE   I++ KI    + +   +  +I   
Sbjct: 188 EDLSFRYLNETEFYK----ISHMMSEKRREREELVDIIVDKIR--SYTEEQGLYGDIYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSIY+ +   +   +++  +  +R I+  +  S V          Y ++G +H +W
Sbjct: 242 PKHIYSIYRKMRDKKKRFDQIYDLIAIRCIM--ETASDV----------YAMVGYIHELW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA PK NGYQS+HTT    +Y     +E+QIRT+EM  +AE G+AAH++ 
Sbjct: 290 RPMPGRFKDYIAAPKANGYQSIHTT----VYGPKGPIEIQIRTKEMHQVAEFGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +                 +G T  +N A  ++ + W+  + E Q+E   +  +++FVD++
Sbjct: 346 K-----------------KGITNKVNQAEQSVGMGWIQELVELQDE---SKDAKDFVDSV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             D+   R++VFTP G ++ LP+ +  +D+AY IHT++G K   AKVNG +V  T  L  
Sbjct: 386 KEDIFTERIYVFTPNGAVQELPRESGPIDFAYAIHTQVGEKATGAKVNGRMVPLTAKLKT 445

Query: 617 AEVVEIITYNVSFS 630
            +VVEIIT   SF 
Sbjct: 446 GDVVEIITNPNSFG 459


>gi|323485946|ref|ZP_08091279.1| hypothetical protein HMPREF9474_03030 [Clostridium symbiosum
           WAL-14163]
 gi|323693057|ref|ZP_08107277.1| hypothetical protein HMPREF9475_02140 [Clostridium symbiosum
           WAL-14673]
 gi|355621474|ref|ZP_09046124.1| hypothetical protein HMPREF1020_00203 [Clostridium sp. 7_3_54FAA]
 gi|323400736|gb|EGA93101.1| hypothetical protein HMPREF9474_03030 [Clostridium symbiosum
           WAL-14163]
 gi|323502938|gb|EGB18780.1| hypothetical protein HMPREF9475_02140 [Clostridium symbiosum
           WAL-14673]
 gi|354823569|gb|EHF07899.1| hypothetical protein HMPREF1020_00203 [Clostridium sp. 7_3_54FAA]
          Length = 761

 Score =  334 bits (856), Expect = 9e-89,   Method: Compositional matrix adjust.
 Identities = 201/502 (40%), Positives = 297/502 (59%), Gaps = 51/502 (10%)

Query: 126 SPERLWEDLRPTISYLSP-NELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
           SPE+L+++L   I    P +++ +V +A  +A+ AH  QKRRSGEP+IIHP+ VA IL +
Sbjct: 22  SPEKLYQELIAGIRKYHPSDDITMVEKAYDIAYNAHKEQKRRSGEPYIIHPLCVAIILAD 81

Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
           LELD E+I AG+LHD VEDT V+T E +   FG  V  +V+G TK++++     K E   
Sbjct: 82  LELDKETIVAGILHDVVEDT-VMTEEELTSIFGEEVALLVDGVTKLTQISWSMDKVE--- 137

Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
              ++A++LR+MFLAM +++RVI++KLADRLHNMRTL +M P KQ   A ET+ ++AP+A
Sbjct: 138 ---IQAENLRKMFLAMAKDIRVILIKLADRLHNMRTLQYMKPEKQKEKARETMDIYAPIA 194

Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
             LG+ +IK+EL++LS  Y   E Y ++  +VA L K+  +   +     +K   +D   
Sbjct: 195 DRLGISKIKTELDDLSLKYLEPEVYYELAEKVA-LRKDAREAFVQGIVFEVKSHMED--- 250

Query: 365 DLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
               ++ ++    K  +SIYK ++    ++ ++  +  +RI+++              + 
Sbjct: 251 --AGIEAKVDGRVKHFFSIYKKMVNQDKTLEQIYDLFAVRIVVE------------TVKD 296

Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDL 484
           CY  LG++H ++ PIP   KDYIA PKPN YQSLHTTLI     S    E+QIRT EM  
Sbjct: 297 CYAALGVIHELYKPIPGRFKDYIAMPKPNMYQSLHTTLIS---SSGQPFEIQIRTFEMHR 353

Query: 485 IAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFV 544
            AE GIAAH+  +       G ++    S   K            +SWL  I EWQ +  
Sbjct: 354 TAEYGIAAHWKYKE-----SGSSKSATDSAEAK------------LSWLRQILEWQRDMS 396

Query: 545 GNMTSREF--VDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAK 602
            N   +EF  +     DL    V+ FTP G++KNLP G+T +D+AY IH+ +GNKMV A+
Sbjct: 397 DN---KEFLSLLKSDLDLFTDNVYCFTPTGDVKNLPSGSTPIDFAYSIHSAVGNKMVGAR 453

Query: 603 VNGNLVSPTHVLANAEVVEIIT 624
           VNG LV+  +V+ N + +EIIT
Sbjct: 454 VNGKLVNIDYVIQNGDRIEIIT 475


>gi|357634035|ref|ZP_09131913.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfovibrio sp. FW1012B]
 gi|357582589|gb|EHJ47922.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfovibrio sp. FW1012B]
          Length = 738

 Score =  334 bits (856), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 202/496 (40%), Positives = 286/496 (57%), Gaps = 50/496 (10%)

Query: 129 RLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
           R+ E L  T  YL+  E  ++ +A + +  AH GQ R SGEP++ HP+E A IL ++ LD
Sbjct: 3   RINEILDKTAVYLTEAEQAIITKAYVFSAAAHAGQVRLSGEPYLSHPLEAAGILADMRLD 62

Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
             S+AAGLLHDTVEDT   T + IEE FG  V  IV+G TK+S L   + K E       
Sbjct: 63  AASVAAGLLHDTVEDTKA-TVDEIEELFGDEVADIVDGVTKIS-LIPFESKEE------A 114

Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
           +A+++R+M LAM  ++RV++VKLADRLHNMRTL    P K++ IA ET+ ++APLA  LG
Sbjct: 115 QAENIRKMILAMANDIRVVLVKLADRLHNMRTLEFQKPVKRALIAQETMDIYAPLANRLG 174

Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
           +++IK+ELE+LSF Y   + Y+++K  V   +   E  +E     ++ +I   Q +    
Sbjct: 175 LHRIKTELEDLSFKYLKPDVYSQIKAGVDRHHTLDESYIER----VIGQIR--QMVGENN 228

Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
           +K  I    K  +S++  +     +I++V+ +   R++++              + CY V
Sbjct: 229 IKARIIGRRKHLWSVFNKMRVQGLTIDQVHDLVAFRVLVETI------------RECYSV 276

Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAER 488
           LGLVH IW P+P   KDYI+ PK N YQSLHTT++    E   R+E+QIRT EM+ +AE 
Sbjct: 277 LGLVHSIWKPVPGRFKDYISMPKANMYQSLHTTVVGPDGE---RIEIQIRTVEMNRLAEE 333

Query: 489 GIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMT 548
           G+AAH+  +          R  G+          N     R +WL  I +WQ E      
Sbjct: 334 GVAAHWKYK---------EREKGKF---------NPKDVERFTWLRQIMDWQREL---KD 372

Query: 549 SREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLV 608
           SREFV  +  DL    V+VFTP+GE+K LP+GAT VD A++IHT +G     AKVNG LV
Sbjct: 373 SREFVANLRFDLFQDEVYVFTPKGEVKELPEGATAVDLAFLIHTAVGEHCAGAKVNGRLV 432

Query: 609 SPTHVLANAEVVEIIT 624
                L N + VEIIT
Sbjct: 433 PLETPLKNGDTVEIIT 448


>gi|226311469|ref|YP_002771363.1| GTP pyrophosphokinase [Brevibacillus brevis NBRC 100599]
 gi|226094417|dbj|BAH42859.1| GTP pyrophosphokinase [Brevibacillus brevis NBRC 100599]
          Length = 723

 Score =  334 bits (856), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 194/498 (38%), Positives = 291/498 (58%), Gaps = 50/498 (10%)

Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
           E ++   +YLS  +++L+ RA  LA +AH+GQ R+SG P+I+HP+ VA IL  L +D  +
Sbjct: 7   EIVKKASTYLSQTDMDLITRAYQLAEKAHEGQIRKSGVPYIMHPIAVAGILANLHMDAVT 66

Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
           IAAG LHD VEDT + T + + E+FG  V  +V+G TK+ K+ K K K E        A+
Sbjct: 67  IAAGFLHDVVEDTEI-TLDHLREQFGPDVALLVDGVTKLEKI-KYKSKEEQ------LAE 118

Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
           + R+M +AM +++RVI++KLADRLHNMRTL HM   KQ  I+ ETL++FAPLA  LG+  
Sbjct: 119 NHRKMLVAMAQDIRVIMIKLADRLHNMRTLRHMSEEKQREISDETLEIFAPLAHRLGIAS 178

Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
           +K ELE+ +  Y N + Y ++   +     E E  L EA+  + +K+ +      + ++ 
Sbjct: 179 VKWELEDTALRYLNPQQYYRIVNLMQKKRVEREAYLNEASDTIREKLGE------LNIEA 232

Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
           EI    K  YSI+K + +     NE+  +  LRII+            +  + CY VLG+
Sbjct: 233 EISGRPKHIYSIFKKMTRQNKQFNEIYDLLALRIIV------------NDIRDCYAVLGI 280

Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
           VH +W P+P   KDYIA PK N YQSLHTT+I    E    LEVQIRT +M   AE GIA
Sbjct: 281 VHTLWKPMPGRFKDYIAMPKTNMYQSLHTTVIGPKGEP---LEVQIRTWDMHQTAEIGIA 337

Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
           AH++ +                  GK++     + A ++  L  I E   E   N  ++E
Sbjct: 338 AHWAYK-----------------EGKSIV--QGSFAEKLGSLREIIEGGSEEAPN--AQE 376

Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
           F++++ +DL    VFVFTP+G++  LPKG+  +D++Y IH+ +GN+ + AKVNG +V   
Sbjct: 377 FMESLKQDLFSDTVFVFTPKGDVVELPKGSVPLDFSYRIHSAVGNRTIGAKVNGKIVPLD 436

Query: 612 HVLANAEVVEIITYNVSF 629
           + +   ++VEI+T   S+
Sbjct: 437 YAMKTGDIVEILTSKHSY 454


>gi|306825730|ref|ZP_07459069.1| GTP diphosphokinase [Streptococcus sp. oral taxon 071 str. 73H25AP]
 gi|304432091|gb|EFM35068.1| GTP diphosphokinase [Streptococcus sp. oral taxon 071 str. 73H25AP]
          Length = 738

 Score =  334 bits (856), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 191/494 (38%), Positives = 293/494 (59%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YL+  ++  V++AL+ A + H GQ R+SGEP+IIHP++VA IL +L+LD  ++A G 
Sbjct: 16  TREYLTKEDVAFVQKALIYAVDCHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT+  T + +E EFG  VR IV+G   V+KLGK++ K    S+++  A++ R+M
Sbjct: 76  LHDVVEDTDA-TLDDLEREFGHDVRIIVDG---VTKLGKVEYK----SLEEQLAENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM+E++RVI+VKL+DRLHNMRTL H+   KQ  I+ ET++++APLA  LG+  +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISSVKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y N  ++ K+   + +  +E E  ++E    ++ K+ED  +     +K +I   
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLED--YATERNLKGKIYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSIY+ +   +    E+  +  +R I+              Q   Y +LG VH +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHELW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA  K NGYQS+HTT    +Y     +E QIRT+EM  +AE G+AAH++ 
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  + G V                 N+   A+ ++W+  + E Q++      ++EFVD++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDSV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             + L   ++VFTP G +++LPK +  +D+AY IHT++G K   AKVNG +V  T  L  
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445

Query: 617 AEVVEIITYNVSFS 630
            + VEIIT   SF 
Sbjct: 446 GDQVEIITNPNSFG 459


>gi|440780767|ref|ZP_20959238.1| (p)ppGpp synthetase/pyrophosphohydrolase RelA/SpoT [Clostridium
           pasteurianum DSM 525]
 gi|440221355|gb|ELP60560.1| (p)ppGpp synthetase/pyrophosphohydrolase RelA/SpoT [Clostridium
           pasteurianum DSM 525]
          Length = 736

 Score =  334 bits (856), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 195/481 (40%), Positives = 281/481 (58%), Gaps = 42/481 (8%)

Query: 148 LVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVV 207
            + +A   A  AH  QKR SGEP+IIHP EVA IL E+ +D  +IAAGLLHD +EDT   
Sbjct: 20  FINKAYNFAMNAHKKQKRESGEPYIIHPEEVACILAEMGMDQNTIAAGLLHDVIEDTEY- 78

Query: 208 TFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVI 267
           T E +  EF   V  +VEG   V+KLGK+  K +    ++ +AD++R+M LAM +++RVI
Sbjct: 79  THEDLTREFNGEVANLVEG---VTKLGKISYKTK----EEQQADNVRKMLLAMAKDIRVI 131

Query: 268 IVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAE 327
           ++KL+DRLHNMRTL +M   KQ   A ETL +FAPLA  LG+ +IK ELE+L+F Y    
Sbjct: 132 LIKLSDRLHNMRTLKYMSASKQKEKAKETLDIFAPLAHRLGISKIKWELEDLAFRYIKPN 191

Query: 328 DYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAV 387
           +Y ++   +A+   E E+ +      L K +ED   +       +I    K  YSIY+ +
Sbjct: 192 EYYELVDDIAEKRVEREEYIRGIISELYKNLEDANIM------ADIDGRPKHFYSIYRKM 245

Query: 388 LKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYI 447
           +    +++++  +  +RI            L +  + CY VLG+VH ++ PIP   KDYI
Sbjct: 246 VNKNKTLDQIFDLTAIRI------------LVNDIRECYTVLGIVHTMYKPIPGRFKDYI 293

Query: 448 ATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHA 507
           A PKPN YQSLH+T+I    +S    E+QIRT EM   AE GIAAH+    +  G+V   
Sbjct: 294 AMPKPNMYQSLHSTVIGPQGKS---FEIQIRTYEMHKTAEYGIAAHWK---YKEGIV--- 344

Query: 508 RPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSRVFV 567
              G   +G  V +  A+   +++W+  + +WQ+E        EF++    DL    VFV
Sbjct: 345 --EGTDNKG--VEIEKADFDTKLTWVREMLDWQKE---TTNPEEFMENFKIDLFEDEVFV 397

Query: 568 FTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITYNV 627
           FTP+G + +LP  AT VD+AY IHT+IGN+ V AKVNG +V   + L   E+VE++T  +
Sbjct: 398 FTPKGSVISLPSEATPVDFAYKIHTDIGNRCVGAKVNGRIVPLDYKLKTGEIVEVLTSGI 457

Query: 628 S 628
            
Sbjct: 458 D 458


>gi|228476468|ref|ZP_04061158.1| GTP pyrophosphokinase [Streptococcus salivarius SK126]
 gi|228251889|gb|EEK10935.1| GTP pyrophosphokinase [Streptococcus salivarius SK126]
          Length = 739

 Score =  334 bits (856), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 186/492 (37%), Positives = 291/492 (59%), Gaps = 49/492 (9%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           +Y+S ++L+LV +A   A +AH GQ R+SGEP+IIHP++VA IL +L LD  ++A G LH
Sbjct: 18  AYMSADDLKLVEKAWHYATDAHSGQSRQSGEPYIIHPIQVAGILADLHLDAVTVACGFLH 77

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT   T + +E +FG  VR IV+G   V+KLGK++ K+    +    A++ R+M +
Sbjct: 78  DVVEDTEK-TLDDLEADFGTDVRNIVDG---VTKLGKVEYKSHEEQL----AENHRKMLM 129

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM++++RVI+VKLADRLHNMRTL H+   KQ  I+ ET++++APLA  LG+ +IK ELE+
Sbjct: 130 AMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELED 189

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
           ++F Y N  ++ K    ++ + KE  +E EE    ++ KI+   +     +  ++    K
Sbjct: 190 MAFRYLNEVEFYK----ISHMMKEKRREREELVDEIVDKIK--TYTAEQGLVGDVYGRPK 243

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIY+ +   +   +++  +  +R +++                 Y +LG +H +W P
Sbjct: 244 HIYSIYRKMRDKKKRFDQIYDLIAIRCVME------------THSDVYAMLGYIHELWRP 291

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PK NGYQS+HTT    +Y     +E+QIRT+EM  +AE G+AAH++ + 
Sbjct: 292 MPGRFKDYIANPKSNGYQSIHTT----VYGPKGPIEIQIRTKEMHQVAEYGVAAHWAYKK 347

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
            + G V                 ++   AL ++W+  + E Q+   G+     FVD++  
Sbjct: 348 GIKGKV-----------------DSKESALGMNWIKDLVELQDASNGDAMG--FVDSVKE 388

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           D+   R++VFTP G ++ LPK +  +D+AY IHT++G K   AKVNG +V  T  L   +
Sbjct: 389 DIFSERIYVFTPNGAVQELPKDSGPIDFAYAIHTQVGEKATGAKVNGRMVPLTAKLKTGD 448

Query: 619 VVEIITYNVSFS 630
           VVEI+T   SF 
Sbjct: 449 VVEIVTNANSFG 460


>gi|406710270|ref|YP_006764996.1| GTP pyrophosphokinase [Streptococcus agalactiae GD201008-001]
 gi|424048660|ref|ZP_17786211.1| GTP pyrophosphokinase [Streptococcus agalactiae ZQ0910]
 gi|389649915|gb|EIM71389.1| GTP pyrophosphokinase [Streptococcus agalactiae ZQ0910]
 gi|406651155|gb|AFS46556.1| GTP pyrophosphokinase [Streptococcus agalactiae GD201008-001]
          Length = 738

 Score =  334 bits (856), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 189/494 (38%), Positives = 293/494 (59%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  Y+S  ++  V+ AL  A  AH  Q R+SGEP+IIHP++VA IL +L LD  ++A G 
Sbjct: 16  TSQYMSETDVAFVKFALNYATAAHYYQARKSGEPYIIHPIQVAGILADLHLDAVTVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT + T + IE +FG  VR I++G   V+KLGK++ K+    +    A++ R+M
Sbjct: 76  LHDVVEDTEI-TLDEIETDFGKDVRDIIDG---VTKLGKVEYKSHEEQL----AENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM++++RVI+VK+ADRLHNMRTL H+   KQ  I+ ET++++APLA  LG+ +IK EL
Sbjct: 128 LMAMSKDIRVILVKIADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y N  ++ K    ++ +  E  +E EE   I++ KI    + +   +  +I   
Sbjct: 188 EDLSFRYLNETEFYK----ISHMMSEKRREREELVDIIVDKIR--SYTEEQGLYGDIYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSIY+ +   +   +++  +  +R I+  +  S V          Y ++G +H +W
Sbjct: 242 PKHIYSIYRKMRDKKKRFDQIYDLIAIRCIM--ETASDV----------YAMVGYIHELW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA PK NGYQS+HTT    +Y     +E+QIRT+EM  +AE G+AAH++ 
Sbjct: 290 RPMPGRFKDYIAAPKANGYQSIHTT----VYGPKGPIEIQIRTKEMHQVAEFGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +                 +G T  +N A  ++ + W+  + E Q+E   +  +++FVD++
Sbjct: 346 K-----------------KGITSKVNQAEQSVGMGWIQELVELQDE---SKDAKDFVDSV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             D+   R++VFTP G ++ LP+ +  +D+AY IHT++G K   AKVNG +V  T  L  
Sbjct: 386 KEDIFTERIYVFTPNGAVQELPRESGPIDFAYAIHTQVGEKATGAKVNGRMVPLTAKLKT 445

Query: 617 AEVVEIITYNVSFS 630
            +VVEIIT   SF 
Sbjct: 446 GDVVEIITNPNSFG 459


>gi|414158038|ref|ZP_11414332.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus sp.
           F0441]
 gi|410870583|gb|EKS18540.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus sp.
           F0441]
          Length = 738

 Score =  334 bits (856), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 191/494 (38%), Positives = 293/494 (59%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YL+  ++  V++AL+ A + H GQ R+SGEP+IIHP++VA IL +L+LD  ++A G 
Sbjct: 16  TREYLTKEDVAFVQKALIYAVDCHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT+  T + +E EFG  VR IV+G   V+KLGK++ K    S+++  A++ R+M
Sbjct: 76  LHDVVEDTDA-TLDDLEREFGHDVRIIVDG---VTKLGKVEYK----SLEEQLAENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM+E++RVI+VKL+DRLHNMRTL H+   KQ  I+ ET++++APLA  LG+  +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISSVKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y N  ++ K+   + +  +E E  ++E    ++ K+ED  +     +K +I   
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLED--YATERNLKGKIYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSIY+ +   +    E+  +  +R I+              Q   Y +LG VH +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHELW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA  K NGYQS+HTT    +Y     +E QIRT+EM  +AE G+AAH++ 
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  + G V                 N+   A+ ++W+  + E Q++      ++EFVD++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDSV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             + L   ++VFTP G +++LPK +  +D+AY IHT++G K   AKVNG +V  T  L  
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445

Query: 617 AEVVEIITYNVSFS 630
            + VEIIT   SF 
Sbjct: 446 GDQVEIITNPNSFG 459


>gi|399887294|ref|ZP_10773171.1| (p)ppGpp synthetase/pyrophosphohydrolase RelA/SpoT [Clostridium
           arbusti SL206]
          Length = 736

 Score =  334 bits (856), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 190/482 (39%), Positives = 284/482 (58%), Gaps = 42/482 (8%)

Query: 147 ELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNV 206
           + + +A   A +AH  QKR SGEP+IIHP EVA IL E+ +D  +IAAGLLHD +EDT  
Sbjct: 19  DFINKAYNFAVDAHKKQKRESGEPYIIHPEEVACILAEMGMDQNTIAAGLLHDVIEDTEY 78

Query: 207 VTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRV 266
            ++E +  EF + V  +VEG   V+KLGK+  K +    ++ +AD++R+M LAM +++RV
Sbjct: 79  -SYEDVTREFNSEVADLVEG---VTKLGKISYKTK----EEQQADNVRKMLLAMAKDIRV 130

Query: 267 IIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNA 326
           I++KL+DRLHNMRTL +M   KQ   A ETL +FAPLA  LG+ +IK ELE+L+F Y   
Sbjct: 131 ILIKLSDRLHNMRTLRYMSVKKQKEKAKETLDIFAPLAHRLGISKIKWELEDLAFRYMKP 190

Query: 327 EDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKA 386
            +Y ++   +++   E E+ +++    L K +E+   L       +I    K  YSIY+ 
Sbjct: 191 NEYYELVDDISEKRVEREEYIKDIVVDLHKNLEEANIL------ADIDGRPKHFYSIYRK 244

Query: 387 VLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDY 446
           ++    +++++  +  +RI            L +  + CY VLG+VH ++ PIP   KDY
Sbjct: 245 MVNKNKTLDQIFDLTAIRI------------LVNDIRECYTVLGIVHTMYKPIPGRFKDY 292

Query: 447 IATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGH 506
           IA PKPN YQSLH+T+I    +S    E+QIRT EM   AE GIAAH+    +  G+   
Sbjct: 293 IAMPKPNMYQSLHSTVIGPQGKS---FEIQIRTYEMHKTAEYGIAAHWK---YKEGITEE 346

Query: 507 ARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSRVF 566
           A      P         A+   +++W+  + +WQ+E        EF+++   DL    VF
Sbjct: 347 ADSKDSEPV-------KADFNTKLTWVREMLDWQKE---TTNPEEFMESFKIDLFEDEVF 396

Query: 567 VFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITYN 626
           VFTP G++ NLP  AT VD+AY IHT+IGN+ +  KVNG +V   + L   E+VE++T  
Sbjct: 397 VFTPNGKVINLPSEATPVDFAYKIHTDIGNRCIGGKVNGKIVPLDYKLKTGEIVEVLTSG 456

Query: 627 VS 628
           ++
Sbjct: 457 IT 458


>gi|288574632|ref|ZP_06392989.1| (p)ppGpp synthetase I, SpoT/RelA [Dethiosulfovibrio peptidovorans
           DSM 11002]
 gi|288570373|gb|EFC91930.1| (p)ppGpp synthetase I, SpoT/RelA [Dethiosulfovibrio peptidovorans
           DSM 11002]
          Length = 753

 Score =  334 bits (856), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 201/498 (40%), Positives = 298/498 (59%), Gaps = 60/498 (12%)

Query: 131 WEDLRPTIS-YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDW 189
           W++L   +S YLS  EL  +  AL+ A EAH  QKR +GEP+IIH V VA IL ++++D 
Sbjct: 38  WQELWSKVSHYLSKEELMELGEALIFAAEAHGEQKRGTGEPYIIHCVYVASILADMKMDV 97

Query: 190 ESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVK 249
           +++ A LLHD +EDT VVT E + E FG  V  +V+G   V+KLGKL  K    S +D +
Sbjct: 98  KTMEAALLHDCIEDT-VVTKEALAERFGEEVGVLVDG---VTKLGKLPFK----SFEDYQ 149

Query: 250 ADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGM 309
           A++LR+MFL M +++RV+++KLADR HNMRTL  +   KQ  IA ETL+++APLA  LG+
Sbjct: 150 AENLRKMFLVMAKDIRVVLIKLADRTHNMRTLGALRKDKQQRIAKETLEIYAPLAHRLGI 209

Query: 310 YQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTV 369
           YQ+K  LE+L+F Y +   Y ++K++V     E E  +++A  +L +K+ + Q +D +  
Sbjct: 210 YQVKRTLEDLAFKYYDPNMYYEIKKKVQKRLPEREATIKKAIDVLEEKL-NSQGIDAL-- 266

Query: 370 KTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVL 429
              I+   K  YSI + + +   S++++  +  +RII+                 CY VL
Sbjct: 267 ---IKGRAKHFYSILEKMNRKGLSVDQLYDLLAMRIIVDDITT------------CYTVL 311

Query: 430 GLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERG 489
           G+VH IW PIP    DYIA PK N YQSLHTT++    E    LEVQIRT EM  +AE G
Sbjct: 312 GIVHTIWKPIPGQFDDYIANPKNNMYQSLHTTVVGPSGEP---LEVQIRTWEMHWLAEYG 368

Query: 490 IAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFV-GNMT 548
           +AAH+                 R   G          A ++  L+A  EW  + + G   
Sbjct: 369 VAAHW-----------------RYKEG----------ADKMDDLDAKLEWIRKAIEGGQE 401

Query: 549 SR--EFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGN 606
           +R  EF++ +  D+L S VFVFTP+G++K+LP+G+T VD+AY +HT++GN+ V A VN  
Sbjct: 402 TRPDEFMERLKDDVLTSDVFVFTPQGDVKSLPRGSTPVDFAYAVHTQVGNQYVGAMVNNR 461

Query: 607 LVSPTHVLANAEVVEIIT 624
           +V   + L N ++V+++T
Sbjct: 462 IVPTDYELQNGDIVKVLT 479


>gi|346307058|ref|ZP_08849203.1| hypothetical protein HMPREF9457_00912 [Dorea formicigenerans
           4_6_53AFAA]
 gi|345907004|gb|EGX76722.1| hypothetical protein HMPREF9457_00912 [Dorea formicigenerans
           4_6_53AFAA]
          Length = 781

 Score =  334 bits (856), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 196/505 (38%), Positives = 296/505 (58%), Gaps = 55/505 (10%)

Query: 125 DSPERLWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILG 183
           D P++L+  L   I    P+ ++  + +A  LA +AH  QKR+SGEP+IIHP+ VA IL 
Sbjct: 43  DDPDKLYGMLIARIQKYHPSADVTQIEKAYNLAKKAHGDQKRKSGEPYIIHPLWVAIILA 102

Query: 184 ELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENH 243
           +LE+D E+I A LLHD VEDT +   + I+EEFG  V  +V+G   V+KLG++    +  
Sbjct: 103 DLEMDKETIIAALLHDVVEDTQIGE-DYIKEEFGEEVALLVDG---VTKLGRVAYSADKL 158

Query: 244 SVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPL 303
            +Q   A++LR+MFLAM +++RVII+KLADRLHNMRTL  M P KQ   A ET+ ++AP+
Sbjct: 159 ELQ---AENLRKMFLAMAKDIRVIIIKLADRLHNMRTLQFMTPAKQQEKARETMDIYAPI 215

Query: 304 AKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQF 363
           A  LG+ +IK+EL++LS  Y   + +  +  ++     E E+         +++I D+  
Sbjct: 216 AGRLGISKIKTELDDLSLKYLKPDVFFDLVNQINARKTEREE--------FVQQIVDEVS 267

Query: 364 LDLMT--VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSP 421
           + +    +K ++    K  +SIYK ++    +++++  +  +RII+              
Sbjct: 268 MHMKNAGIKADVNGRVKHFFSIYKKMVNQDKTVDQIYDLFAVRIIV------------DS 315

Query: 422 QQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEE 481
            + CY  LG++H I+TPIP   KDYIA PKPN YQSLHTTL+  + +     E+QIRT+E
Sbjct: 316 VKDCYAALGIIHEIYTPIPGRFKDYIAMPKPNMYQSLHTTLMSSIGQP---FEIQIRTQE 372

Query: 482 MDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQE 541
           M   AE GIAAH+             + +G S +G            ++SWL  I EWQ 
Sbjct: 373 MHKTAEYGIAAHWK-----------YKESGGSKKGVMAEEE------KMSWLRQILEWQR 415

Query: 542 EFVGNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMV 599
           +   N   +EF+  I    DL    V+ FTP+G++K LP G+T +D+AY IH+ +GNKMV
Sbjct: 416 DMSDN---KEFLSLIKGDLDLFADDVYCFTPQGDVKTLPTGSTPIDFAYSIHSAVGNKMV 472

Query: 600 AAKVNGNLVSPTHVLANAEVVEIIT 624
            A+VNG LV   + + N + +EI+T
Sbjct: 473 GARVNGKLVPIDYRIQNGDRIEILT 497


>gi|428305760|ref|YP_007142585.1| (p)ppGpp synthetase I SpoT/RelA [Crinalium epipsammum PCC 9333]
 gi|428247295|gb|AFZ13075.1| (p)ppGpp synthetase I, SpoT/RelA [Crinalium epipsammum PCC 9333]
          Length = 761

 Score =  333 bits (855), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 193/480 (40%), Positives = 277/480 (57%), Gaps = 47/480 (9%)

Query: 145 ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDT 204
           + +L+ RA    +  HDGQ+R SGEP+I HPV VA +L +L      IAAG LHD VEDT
Sbjct: 50  DADLICRAFEFGYNLHDGQRRASGEPYICHPVAVAGLLRDLGGSGAMIAAGFLHDIVEDT 109

Query: 205 NVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEV 264
           +V T + +E+ FG  VR++VEG TK+SKL     K E       +A++ R+MF+AM  ++
Sbjct: 110 DV-TSDDLEKMFGKEVRQLVEGVTKLSKL-NFSSKKER------QAENFRRMFIAMAHDI 161

Query: 265 RVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYT 324
           RVI+VKLADRLHNMRTL H+P  K+  IA ET ++FAPLA  LG+ + K ELE+L+F Y 
Sbjct: 162 RVIVVKLADRLHNMRTLEHLPDEKRRRIALETREIFAPLANRLGIGRFKWELEDLAFKYL 221

Query: 325 NAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIY 384
             E Y K++  VA+   + E  L    +IL + +       L     E+    K  Y IY
Sbjct: 222 EPEAYRKIQLLVAEKRTDREARLTNVTEILQQGLTASGIECL-----ELSGRPKHLYGIY 276

Query: 385 KAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMK 444
           + + + +   +E+  +A +RI++K              + CY  L +VH  + PIP   K
Sbjct: 277 QKMQRQQKEFSEIFDLAAIRILVKTN------------EECYRALAVVHDAFRPIPGRFK 324

Query: 445 DYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLV 504
           DYI  PKPN YQSLHTT++     +   LE+QIRT++M  IAE GIAAH+          
Sbjct: 325 DYIGLPKPNRYQSLHTTVVSL---NGRPLEIQIRTQQMHHIAEYGIAAHWK--------- 372

Query: 505 GHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSR 564
              +  G S R K    +      + +WL  + +WQ E      ++E+++ +  +L    
Sbjct: 373 --YKETGNSNRSKVTGTDE-----KFTWLRQLLDWQNEL---KDAQEYLENVKDNLFDDD 422

Query: 565 VFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
           V+VFTP+G++  L +GAT VD+AY IHTE+GN    AKVNG +V+    L+N ++VEIIT
Sbjct: 423 VYVFTPQGDVVPLSRGATTVDFAYRIHTEVGNHCAGAKVNGRIVTLDTHLSNGDIVEIIT 482


>gi|293364924|ref|ZP_06611641.1| GTP diphosphokinase [Streptococcus oralis ATCC 35037]
 gi|307703177|ref|ZP_07640123.1| RelA/SpoT family protein [Streptococcus oralis ATCC 35037]
 gi|291316374|gb|EFE56810.1| GTP diphosphokinase [Streptococcus oralis ATCC 35037]
 gi|307623252|gb|EFO02243.1| RelA/SpoT family protein [Streptococcus oralis ATCC 35037]
          Length = 738

 Score =  333 bits (855), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 191/494 (38%), Positives = 293/494 (59%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YL+  ++  V++AL+ A + H GQ R+SGEP+IIHP++VA IL +L+LD  ++A G 
Sbjct: 16  TKEYLTKEDVAFVQKALIYAVDCHSGQFRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT+  T + +E EFG  VR IV+G   V+KLGK++ K    S+++  A++ R+M
Sbjct: 76  LHDVVEDTDA-TLDDLEREFGHDVRIIVDG---VTKLGKVEYK----SLEEQLAENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM+E++RVI+VKL+DRLHNMRTL H+   KQ  I+ ET++++APLA  LG+  +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISSVKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y N  ++ K+   + +  +E E  ++E    ++ K+ED  +     +K +I   
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLED--YATERNLKGKIYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSIY+ +   +    E+  +  +R I+              Q   Y +LG VH +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHELW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA  K NGYQS+HTT    +Y     +E QIRT+EM  +AE G+AAH++ 
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  + G V                 N+   A+ ++W+  + E Q++      ++EFVD++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDSV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             + L   ++VFTP G +++LPK +  +D+AY IHT++G K   AKVNG +V  T  L  
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445

Query: 617 AEVVEIITYNVSFS 630
            + VEIIT   SF 
Sbjct: 446 GDQVEIITNPNSFG 459


>gi|289550601|ref|YP_003471505.1| GTP pyrophosphokinase [Staphylococcus lugdunensis HKU09-01]
 gi|385784229|ref|YP_005760402.1| GTP pyrophosphokinase [Staphylococcus lugdunensis N920143]
 gi|418413905|ref|ZP_12987121.1| GTP pyrophosphokinase [Staphylococcus lugdunensis ACS-027-V-Sch2]
 gi|289180133|gb|ADC87378.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Staphylococcus
           lugdunensis HKU09-01]
 gi|339894485|emb|CCB53764.1| GTP pyrophosphokinase [Staphylococcus lugdunensis N920143]
 gi|410877543|gb|EKS25435.1| GTP pyrophosphokinase [Staphylococcus lugdunensis ACS-027-V-Sch2]
          Length = 729

 Score =  333 bits (855), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 191/492 (38%), Positives = 290/492 (58%), Gaps = 49/492 (9%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           SYLSP++ + V ++  LA+EAH GQ R++G P+I+HP++VA IL E+ LD  +I AG LH
Sbjct: 18  SYLSPDDYQYVLKSYHLAYEAHQGQFRKNGLPYIMHPIQVAGILTEMRLDGPTIVAGFLH 77

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D +EDT   TF+ ++E F   + RIV+G TK+ K+ K + K E       +A++ R++F+
Sbjct: 78  DVIEDT-AYTFDDVKEMFNEEIARIVDGVTKLKKV-KYRSKEEQ------QAENHRKLFI 129

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           A+ ++VRVI+VKLADRLHNMRTL  MP  KQ  I+ ETL+++APLA  LG+  IK ELE+
Sbjct: 130 AIAKDVRVILVKLADRLHNMRTLKAMPRDKQIRISKETLEIYAPLADRLGINTIKWELED 189

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
            +  Y ++  Y     R+ +L K+   E E   K  +  I  D  +  M +K EI    K
Sbjct: 190 TALRYIDSVQYF----RIVNLMKKKRSEREAYIKNAIDMI--DAEMIKMKIKGEINGRPK 243

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIY+ ++K +   +++  +  +R+I+            +    CY +LGLVH +W P
Sbjct: 244 HIYSIYRKMMKQKKQFDQIFDLLAIRVIV------------NSINDCYAILGLVHTLWKP 291

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PK N YQSLHTT++     +   LE+QIRT EM  IAE G+AAH++ + 
Sbjct: 292 MPGRFKDYIAMPKQNMYQSLHTTVVG---PNGDPLEIQIRTYEMHEIAEHGVAAHWAYK- 347

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                            GKTV     +   +++WL   +E  E    +  ++EF++++  
Sbjct: 348 ----------------EGKTVDEKTQDFQNKLNWL---KELAEADHTSNDAQEFMESLKY 388

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           DL   +V+ FTP  ++  LP GA  +D+AY IH+E+GNKM+ AK NG +V   +V+   +
Sbjct: 389 DLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKANGKIVPIDYVIQTGD 448

Query: 619 VVEIITYNVSFS 630
           ++EI T   S+ 
Sbjct: 449 IIEIRTSKHSYG 460


>gi|339640594|ref|ZP_08662038.1| GTP diphosphokinase [Streptococcus sp. oral taxon 056 str. F0418]
 gi|339453863|gb|EGP66478.1| GTP diphosphokinase [Streptococcus sp. oral taxon 056 str. F0418]
          Length = 738

 Score =  333 bits (855), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 191/494 (38%), Positives = 295/494 (59%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YLS  ++  V++AL+ A + H GQ R+SGEP+I+HP++VA IL +L+LD  ++A G 
Sbjct: 16  TRKYLSAEDVAFVQKALIYAVDCHSGQFRKSGEPYIVHPIQVAGILAKLKLDAVTVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT+  T + +E EFG+ VR IV+G   V+KLGK+K K+    +    A++ R+M
Sbjct: 76  LHDVVEDTDA-TLDDLEREFGSDVRVIVDG---VTKLGKVKYKSHEEQL----AENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM+E++RVI+VKLADRLHNMRTL H+   KQ  I+ ET++++APLA  LG+  +K EL
Sbjct: 128 LMAMSEDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISSVKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y N  ++ K+   + +  +E E  +EE    +++KIE   +     +  EI   
Sbjct: 188 EDLSFRYLNEIEFYKISHTMKEKRREREALVEE----VVRKIE--TYAGERHLHGEIYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSIY+ +   +   +E+  +  +R I++           +P  + Y +LG +H +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFDEIYDLIAIRCILE-----------TPSDV-YAMLGYIHELW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA  K NGYQS+HTT    +Y     +E QIRT+EM  +AE G+AAH++ 
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  + G V                 ++   A+ ++W++ + E Q E   +  ++EFVD++
Sbjct: 346 KKGIKGKV-----------------DSKESAIGMNWIHEMMELQAE---SGDAQEFVDSV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             + L   ++VFTP G ++ LPK +  +D+AY IHT++G +   AKVNG +V  T  L  
Sbjct: 386 KENYLAEEIYVFTPDGSVRALPKDSGPIDFAYEIHTKVGERATGAKVNGRMVPLTTKLKT 445

Query: 617 AEVVEIITYNVSFS 630
            + VEIIT   SF 
Sbjct: 446 GDQVEIITNANSFG 459


>gi|421451544|ref|ZP_15900905.1| GTP pyrophosphokinase / Guanosine-3',5'-bis(Diphosphate)
           3'-pyrophosphohydrolase [Streptococcus salivarius K12]
 gi|400181975|gb|EJO16237.1| GTP pyrophosphokinase / Guanosine-3',5'-bis(Diphosphate)
           3'-pyrophosphohydrolase [Streptococcus salivarius K12]
          Length = 739

 Score =  333 bits (855), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 187/492 (38%), Positives = 291/492 (59%), Gaps = 49/492 (9%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           SY+S ++L+LV +A   A +AH GQ R+SGEP+IIHP++VA IL +L LD  ++A G LH
Sbjct: 18  SYMSADDLKLVEKAWHYATDAHSGQFRQSGEPYIIHPIQVAGILADLHLDAVTVACGFLH 77

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT   T + +E +FG  VR IV+G   V+KLGK++ K+    +    A++ R+M +
Sbjct: 78  DVVEDTEK-TLDDLEADFGTDVRNIVDG---VTKLGKVEYKSHEEQL----AENHRKMLM 129

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM++++RVI+VKLADRLHNMRTL H+   KQ  I+ ET++++APLA  LG+ +IK ELE+
Sbjct: 130 AMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELED 189

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
           ++F Y N  ++ K    ++ + KE  +E EE    ++ KI+   +     +  ++    K
Sbjct: 190 MAFRYLNEVEFYK----ISHMMKEKRREREELVDEIVDKIK--TYTAEQGLVGDVYGRPK 243

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIY+ +   +   +++  +  +R +++                 Y +LG +H +W P
Sbjct: 244 HIYSIYRKMRDKKKRFDQIYDLIAIRCVME------------THSDVYAMLGYIHELWRP 291

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PK NGYQS+HTT    +Y     +E+QIRT+EM  +AE G+AAH++ + 
Sbjct: 292 MPGRFKDYIANPKSNGYQSIHTT----VYGPKGPIEIQIRTKEMHQVAEYGVAAHWAYKK 347

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
            + G V                 ++   AL ++W+  + E Q+   G+     FVD++  
Sbjct: 348 GIKGKV-----------------DSKESALGMNWIKDLVELQDASNGDAMG--FVDSVKE 388

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           D+   R++VFTP G ++ LPK +  +D+AY IHT++G K   AKVNG +V  T  L   +
Sbjct: 389 DIFSERIYVFTPNGAVQELPKDSGPIDFAYAIHTQVGEKATGAKVNGRMVPLTAKLKTGD 448

Query: 619 VVEIITYNVSFS 630
           VVEI+T   SF 
Sbjct: 449 VVEIVTNANSFG 460


>gi|418017021|ref|ZP_12656580.1| putative GTP pyrophosphokinase [Streptococcus salivarius M18]
 gi|345527714|gb|EGX31022.1| putative GTP pyrophosphokinase [Streptococcus salivarius M18]
          Length = 739

 Score =  333 bits (855), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 187/492 (38%), Positives = 291/492 (59%), Gaps = 49/492 (9%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           +Y+S ++L+LV +A   A +AH GQ R+SGEP+IIHP++VA IL +L LD  ++A G LH
Sbjct: 18  AYMSADDLKLVEKAWHYATDAHSGQFRQSGEPYIIHPIQVAGILADLHLDAVTVACGFLH 77

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT   T + +E +FG  VR IV+G   V+KLGK++ K+    +    A++ R+M +
Sbjct: 78  DVVEDTEK-TLDDLEADFGTDVRNIVDG---VTKLGKVEYKSHEEQL----AENHRKMLM 129

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM++++RVI+VKLADRLHNMRTL H+   KQ  I+ ET++++APLA  LG+ +IK ELE+
Sbjct: 130 AMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELED 189

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
           +SF Y N  ++ K    ++ + KE  +E EE    ++ KI+   +     +  ++    K
Sbjct: 190 MSFRYLNEVEFYK----ISHMMKEKRREREELVDEIVDKIK--TYTAEQGLVGDVYGRPK 243

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIY+ +   +   +++  +  +R +++                 Y +LG +H +W P
Sbjct: 244 HIYSIYRKMRDKKKRFDQIYDLIAIRCVME------------THSDVYAMLGYIHELWRP 291

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PK NGYQS+HTT    +Y     +E+QIRT+EM  +AE G+AAH++ + 
Sbjct: 292 MPGRFKDYIANPKSNGYQSIHTT----VYGPKGPIEIQIRTKEMHQVAEYGVAAHWAYKK 347

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
            + G V                 ++   AL ++W+  + E Q+   G+     FVD++  
Sbjct: 348 GIKGKV-----------------DSKESALGMNWIKDLVELQDASNGDAMG--FVDSVKE 388

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           D+   R++VFTP G ++ LPK +  +D+AY IHT++G K   AKVNG +V  T  L   +
Sbjct: 389 DIFSERIYVFTPNGAVQELPKDSGPIDFAYAIHTQVGEKATGAKVNGRMVPLTAKLKTGD 448

Query: 619 VVEIITYNVSFS 630
           VVEI+T   SF 
Sbjct: 449 VVEIVTNANSFG 460


>gi|307709582|ref|ZP_07646035.1| GTP pyrophosphokinase [Streptococcus mitis SK564]
 gi|307619618|gb|EFN98741.1| GTP pyrophosphokinase [Streptococcus mitis SK564]
          Length = 740

 Score =  333 bits (855), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 192/494 (38%), Positives = 289/494 (58%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YLS  ++  V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD  ++A G 
Sbjct: 16  TQKYLSKEDVAFVHKALVYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT+  T + +E EFG  VR IV+G   V+KLGK+K K+    +    A++ R+M
Sbjct: 76  LHDVVEDTDA-TLDDLEREFGPDVRVIVDG---VTKLGKVKYKSHEEQL----AENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM+E++RVI+VKL+DRLHNMRTL H+   KQ  I+ ET++++APLA  LG+  +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISKETMEIYAPLAHRLGISSVKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y N  ++ K+   + +  +E E  ++E    ++ K+ED  +     +K +I   
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLED--YTTDRHLKGKIYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSI++ +   R    E+  +  +R I+              Q   Y +LG VH +W
Sbjct: 242 PKHIYSIFRKMQDKRKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHELW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA  K NGYQS+HTT    +Y     +E QIRT+ M  +AE G+AAH++ 
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKAMHEVAEYGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  V G V                 N+   A+ ++W+  + E Q++      ++EFVD++
Sbjct: 346 KKGVKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDSV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             + L   ++VFTP G +++LPK +  +D+AY IHT++G K   AKVNG +V  T  L  
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445

Query: 617 AEVVEIITYNVSFS 630
            + VEI+T   SF 
Sbjct: 446 GDQVEIVTNPNSFG 459


>gi|188996556|ref|YP_001930807.1| (p)ppGpp synthetase I SpoT/RelA [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188931623|gb|ACD66253.1| (p)ppGpp synthetase I, SpoT/RelA [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 713

 Score =  333 bits (855), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 201/503 (39%), Positives = 292/503 (58%), Gaps = 61/503 (12%)

Query: 125 DSPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
           D+P +   +L   I YL P E + +  A+    E H  Q R+SGEP+ IHP+E A+ + +
Sbjct: 5   DAPAK---ELLNKIDYLKPEEKQEIENAIDYVIEKHKDQYRKSGEPYYIHPIEAAKTIAD 61

Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
           L+LD  SI + LLHD VEDT+  T E IEE+FG  V  IV+G   V+K+GK + +N    
Sbjct: 62  LKLDKTSIISTLLHDIVEDTDT-TLEEIEEKFGKKVAEIVDG---VTKIGKYQFEN---- 113

Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
           ++D K ++ R++ ++  +++RVI+VKLADRLHNM+TL H+   KQ  IA ETL+++AP+A
Sbjct: 114 LEDAKYENFRKLIISTAKDIRVILVKLADRLHNMKTLQHLREDKQKRIAKETLEIYAPIA 173

Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
             LG++ IK ELE+L+FMY   E+Y KV    A   +++EK L E    ++K       L
Sbjct: 174 SRLGLWNIKRELEDLAFMYLYPEEYKKVATYFAHSKEKYEKYLTEKVIPVLK-----DAL 228

Query: 365 DLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
               +K EI+   K  YSIY+  L+    +++V  +  +R+            L    + 
Sbjct: 229 KQHGIKAEIQYRYKHLYSIYEKTLRKNLKLSDVYDVFGVRV------------LVEDVKD 276

Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-PFLYESMFRLEVQIRTEEMD 483
           CY  LG+VH IWTP+P   KDYI+ PK N YQ+LHTT + P   E  F +E+QI+T +M 
Sbjct: 277 CYLALGVVHSIWTPVPGKFKDYISLPKSNFYQALHTTAVGP---EGRF-VEIQIKTFQMH 332

Query: 484 LIAERGIAAH--YSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQE 541
            IAE GIAAH  Y G                   GK +   +A   +   WL  + E  +
Sbjct: 333 KIAEEGIAAHWIYKG-------------------GKDLTEKDAQTFV---WLKNLLETLK 370

Query: 542 EFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAA 601
           E     +S E ++ I+ DL+   ++VFTP+G++  LP G+T VD+AY IHT++G+K V A
Sbjct: 371 E----NSSSEIINDISNDLILDEIYVFTPKGDLIKLPSGSTPVDFAYAIHTKVGHKAVGA 426

Query: 602 KVNGNLVSPTHVLANAEVVEIIT 624
           KVNG LV     L + +VVEIIT
Sbjct: 427 KVNGKLVPLDTKLKSGDVVEIIT 449


>gi|15613805|ref|NP_242108.1| GTP pyrophosphokinase [Bacillus halodurans C-125]
 gi|10173858|dbj|BAB04961.1| GTP pyrophosphokinase (stringent response) [Bacillus halodurans
           C-125]
          Length = 728

 Score =  333 bits (855), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 197/492 (40%), Positives = 293/492 (59%), Gaps = 54/492 (10%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           YL  + +E ++RA   A +AH GQ R+SGEP+I+HPV+VA I+ +LELD  ++AA  LHD
Sbjct: 17  YLDEHHIEFLQRAYEFAEKAHAGQYRKSGEPYILHPVQVAGIIVDLELDPNTVAAAFLHD 76

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            VEDT+V T E +E+EF   V  +V+G TK+ K+     + +       +A++ R+M +A
Sbjct: 77  VVEDTDV-TVEALEKEFNEQVAMLVDGVTKLKKIKYKSKEEQ-------QAENHRKMLVA 128

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M +++RVI++KLADRLHNMRTL +MPP KQ   + ETL++FAPLA  LG+  IK ELE++
Sbjct: 129 MAKDIRVILIKLADRLHNMRTLRYMPPEKQRITSNETLEIFAPLAHRLGISTIKWELEDI 188

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           +  Y + + Y     R+ +L K+   E EE  + ++ KI   Q  D+  V+ EI    K 
Sbjct: 189 ALRYLDPQQYY----RIVNLMKKKRAEREEYIEDVIDKIRK-QLQDI-KVEAEISGRPKH 242

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIY+ ++      NE+  +  +RII+K              + CY  LG++H  W P+
Sbjct: 243 IYSIYRKMVLQNKQFNEIYDLLAVRIIVKNI------------KDCYAGLGVIHTCWKPM 290

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK N YQSLHTT++     +   LEVQIRTEEM  +AE G+AAH++ +  
Sbjct: 291 PGRFKDYIAMPKANMYQSLHTTVVG---PNGDPLEVQIRTEEMHRVAEYGVAAHWAYK-- 345

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNAN-IALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                           G T+    AN +  +++W   I EWQ +      ++EF++++  
Sbjct: 346 ---------------EGTTL----ANPMEDKLTWFREILEWQND---TNDAQEFMESLKM 383

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           DL    VFVFTP+G++  LP+G+  +D+AY IHTEIGN+ + AKVNG +V   H L   +
Sbjct: 384 DLFSDMVFVFTPKGDVIELPRGSVPLDFAYRIHTEIGNRCIGAKVNGKMVPLDHQLKTGD 443

Query: 619 VVEIITYNVSFS 630
           +VE++T   S+ 
Sbjct: 444 IVEVLTSKHSYG 455


>gi|303248713|ref|ZP_07334966.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfovibrio fructosovorans JJ]
 gi|302489878|gb|EFL49806.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfovibrio fructosovorans JJ]
          Length = 750

 Score =  333 bits (855), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 201/498 (40%), Positives = 289/498 (58%), Gaps = 54/498 (10%)

Query: 129 RLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
           R+ E L  T  YLS  E  L+ +A + +  AH GQ R SGEP++ HP+EVA +L ++ LD
Sbjct: 10  RINEILDKTAIYLSEAEQALLTKAYVFSAAAHAGQVRLSGEPYLSHPLEVAGLLADMRLD 69

Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
             SIAAGLLHDTVEDT   T + +EE FG  V  IV+G TK+S L   + K E       
Sbjct: 70  AASIAAGLLHDTVEDTKA-TVDEVEELFGDDVADIVDGVTKIS-LIPFESKEE------A 121

Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
           +A+++R+M LAM  ++RV++VKLADRLHNMRTL    P+KQ+ IA ET+ ++APLA  LG
Sbjct: 122 QAENIRKMILAMANDIRVVLVKLADRLHNMRTLEFQKPYKQARIAQETMDIYAPLANRLG 181

Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEA--NKILMKKIEDDQFLDL 366
           +++IK+ELE++SF Y   + Y ++K  V     +  + L+E+   +++ +  E    L  
Sbjct: 182 LHRIKTELEDISFKYLKPDVYNQIKTGV-----DRHRTLDESYIERVISQVKE---LLRP 233

Query: 367 MTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICY 426
             ++  I    K  +S++  +     ++++V+ +   R+I++              + CY
Sbjct: 234 NHIRARIFGRRKHLWSVFNKMRVQGLTLDQVHDLVAFRVIVE------------NIRECY 281

Query: 427 HVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIA 486
            VLGLVH IW P+P   KDYI+ PK N YQSLHTT++    E   R+E+QIRT EM+ +A
Sbjct: 282 AVLGLVHSIWKPVPGRFKDYISMPKANMYQSLHTTVVGPDGE---RIEIQIRTVEMNRLA 338

Query: 487 ERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGN 546
           E G+AAH+  +          R  G+          N     R +WL  I +WQ E    
Sbjct: 339 EEGVAAHWKYK---------EREKGKF---------NPKDVERFAWLRQIMDWQREL--- 377

Query: 547 MTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGN 606
             SREFV  +  DL    V+VFTP+G++K LP+G T VD A++IHT +G     AKVNG 
Sbjct: 378 KDSREFVANLRFDLFQDEVYVFTPKGDVKELPEGGTAVDLAFLIHTAVGEHCAGAKVNGK 437

Query: 607 LVSPTHVLANAEVVEIIT 624
           LV+    L N + VEIIT
Sbjct: 438 LVTLETPLKNGDTVEIIT 455


>gi|414160989|ref|ZP_11417252.1| GTP pyrophosphokinase [Staphylococcus simulans ACS-120-V-Sch1]
 gi|410876668|gb|EKS24566.1| GTP pyrophosphokinase [Staphylococcus simulans ACS-120-V-Sch1]
          Length = 729

 Score =  333 bits (855), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 197/493 (39%), Positives = 291/493 (59%), Gaps = 53/493 (10%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           SYLS  E E V ++  +A+EAH GQ R++G P+I+HP++VA IL E+ LD  +I AG LH
Sbjct: 18  SYLSKEEYEHVLKSYHIAYEAHQGQFRKNGLPYIMHPIQVAGILTEMHLDGPTIVAGFLH 77

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D +EDT   TF+ ++  F   V  IVEG TK+ K+ K + K E       +A++ R++F+
Sbjct: 78  DVIEDTPY-TFDDVKAMFNDEVAMIVEGVTKLKKV-KYRSKEEQ------QAENHRKLFI 129

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           A+ ++VRVI+VKLADRLHNMRTL  MP  KQ  I+ ETL+++APLA  LG+  IK ELE+
Sbjct: 130 AIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISKETLEIYAPLAHRLGINTIKWELED 189

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEE--ANKILMKKIEDDQFLDLMTVKTEIRSV 376
           ++  Y +   Y     R+ +L K+   E E   AN I   + E    +D M +  EI   
Sbjct: 190 IALRYIDGVQYF----RIVNLMKKKRSEREAYIANAIDNIRAE----MDKMHISGEINGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSIY+ ++K +   +++  +  +RII+               + CY VLGLVH +W
Sbjct: 242 PKHIYSIYRKMMKQKKQFDQIFDLLAVRIIV------------DSIKDCYAVLGLVHTLW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA PK N YQSLHTT++     +   LE+QIRT EM  IAE G+AAH++ 
Sbjct: 290 KPMPGRFKDYIAMPKQNMYQSLHTTVVG---PNGDPLEIQIRTHEMHEIAEHGVAAHWAY 346

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +                  GK V  +N++ A ++SWL  + E  +    N  ++EF++++
Sbjct: 347 K-----------------EGKKVTDDNSSYAKKLSWLKDLAEADK--TAN-DAQEFMESL 386

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             DL   +V+ FTP+ ++  LP GA  +D+AY +H+E+GNKM+ AKVNG +    +VL  
Sbjct: 387 KFDLQSDKVYAFTPQSDVIELPYGAVPIDFAYAVHSEVGNKMIGAKVNGKIEPIDYVLQT 446

Query: 617 AEVVEIITYNVSF 629
            ++VEI T   S+
Sbjct: 447 GDIVEIRTSKHSY 459


>gi|314991932|ref|ZP_07857387.1| GTP diphosphokinase [Enterococcus faecium TX0133B]
 gi|313593516|gb|EFR72361.1| GTP diphosphokinase [Enterococcus faecium TX0133B]
          Length = 737

 Score =  333 bits (855), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 193/493 (39%), Positives = 287/493 (58%), Gaps = 51/493 (10%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
            Y+ P  +  V +A   A  AHDGQ R+SGEP+IIHP++VA IL +L++D  ++A G LH
Sbjct: 18  QYMGPEHVAFVEKACEYATAAHDGQFRKSGEPYIIHPIQVAGILADLKMDPHTVATGFLH 77

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT + T E + EEFG  V  +V+G   V+KLGK+K K+    +    A++ R+M L
Sbjct: 78  DVVEDTEI-TLEDLREEFGDDVAMLVDG---VTKLGKIKYKSHEEQL----AENHRKMLL 129

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM +++RVI+VKLADRLHNMRTL H+   KQ  IA ETL+++APLA  LG+ +IK ELE+
Sbjct: 130 AMAQDLRVIMVKLADRLHNMRTLKHLREDKQRRIAQETLEIYAPLAHRLGISRIKWELED 189

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQF-LDLMTVKTEIRSVC 377
            +  Y N + Y ++   +       + + EE  K +   +ED +   + + +  EI    
Sbjct: 190 TALRYLNPKQYYRIVHLM-------QTKREEREKYVSGTVEDIRIATEELGIFAEIYGRP 242

Query: 378 KEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWT 437
           K  YSIY+ +   +   NE+  +  +R+I+               + CY VLG +H  W 
Sbjct: 243 KHIYSIYRKMKDQKKQFNEIYDLLVIRVIV------------DSIKDCYAVLGAIHTKWK 290

Query: 438 PIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGR 497
           P+P   KDYIA PK N YQSLHTT+I     +   +E+QIRT+EM  IAE G+AAH++  
Sbjct: 291 PMPGRFKDYIAMPKANMYQSLHTTVIG---PAGNPVEIQIRTQEMHEIAEFGVAAHWA-- 345

Query: 498 VFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTIT 557
            +  G      P+G              +  ++S  + I E Q+E   +  + EF++ + 
Sbjct: 346 -YKEGKNEKVEPDG--------------MTKQLSSFHEILELQDE---SYDASEFMEGVK 387

Query: 558 RDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANA 617
            D+   +V+VFTP+G++  LPKG+  +D+AY IHT+IGNK   AKVNG +V   + L N 
Sbjct: 388 GDIFSDKVYVFTPKGDVTELPKGSGPLDFAYSIHTDIGNKTTGAKVNGKMVQLDYKLKNG 447

Query: 618 EVVEIITYNVSFS 630
           +++EI+T   SF 
Sbjct: 448 DIIEIMTSPNSFG 460


>gi|379021418|ref|YP_005298080.1| GTP pyrophosphokinase , (p)ppGppsynthetase I [Staphylococcus aureus
           subsp. aureus M013]
 gi|418562634|ref|ZP_13127091.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21262]
 gi|418950240|ref|ZP_13502432.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-160]
 gi|359830727|gb|AEV78705.1| GTP pyrophosphokinase , (p)ppGppsynthetase I [Staphylococcus aureus
           subsp. aureus M013]
 gi|371973738|gb|EHO91086.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21262]
 gi|375377478|gb|EHS80945.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-160]
          Length = 729

 Score =  333 bits (855), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 194/498 (38%), Positives = 292/498 (58%), Gaps = 49/498 (9%)

Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
           E L    SYLS +E E V ++  +A+EAH GQ R++G P+I+HP++VA IL E+ LD  +
Sbjct: 11  EVLHKAKSYLSADEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPT 70

Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
           I AG LHD +EDT   TFE ++E F   V RIV+G TK+ K+ K + K E       +A+
Sbjct: 71  IVAGFLHDVIEDTPY-TFEDVKEMFNEEVARIVDGVTKLKKV-KYRSKEEQ------QAE 122

Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
           + R++F+A+ ++VRVI+VKLADRLHNMRTL  MP  KQ  I+ ETL+++APLA  LG+  
Sbjct: 123 NHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIYAPLAHRLGINT 182

Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
           IK ELE+ +  Y +   Y     R+ +L K+   E E   +  + +I  +  +D M ++ 
Sbjct: 183 IKWELEDTALRYIDNVQYF----RIVNLMKKKRSEREAYIETAIDRIRTE--MDRMNIEG 236

Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
           +I    K  YSIY+ ++K +   +++  +  +R+I+            +    CY +LGL
Sbjct: 237 DINGRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV------------NSINDCYAILGL 284

Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
           VH +W P+P   KDYIA PK N YQSLHTT++     +   LE+QIRT +M  IAE G+A
Sbjct: 285 VHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVVG---PNGDPLEIQIRTFDMHEIAEHGVA 341

Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
           AH++ +                  GK V   +     +++WL   +E  E    +  ++E
Sbjct: 342 AHWAYK-----------------EGKKVSEKDQTYQNKLNWL---KELAEADHTSSDAQE 381

Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
           F++T+  DL   +V+ FTP  ++  LP GA  +D+AY IH+E+GNKM+ AKVNG +V   
Sbjct: 382 FMETLKYDLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPID 441

Query: 612 HVLANAEVVEIITYNVSF 629
           +VL   ++VEI T   S+
Sbjct: 442 YVLQTGDIVEIRTSKHSY 459


>gi|315612694|ref|ZP_07887606.1| GTP diphosphokinase [Streptococcus sanguinis ATCC 49296]
 gi|331266875|ref|YP_004326505.1| GTP pyrophosphokinase [Streptococcus oralis Uo5]
 gi|406587662|ref|ZP_11062516.1| GTP pyrophosphokinase [Streptococcus sp. GMD1S]
 gi|417940275|ref|ZP_12583563.1| RelA/SpoT family protein [Streptococcus oralis SK313]
 gi|419813840|ref|ZP_14338650.1| GTP pyrophosphokinase [Streptococcus sp. GMD2S]
 gi|419816886|ref|ZP_14341058.1| GTP pyrophosphokinase [Streptococcus sp. GMD4S]
 gi|315315281|gb|EFU63321.1| GTP diphosphokinase [Streptococcus sanguinis ATCC 49296]
 gi|326683547|emb|CBZ01165.1| GTP pyrophosphokinase, putative stringent response protein
           [Streptococcus oralis Uo5]
 gi|343389156|gb|EGV01741.1| RelA/SpoT family protein [Streptococcus oralis SK313]
 gi|404466650|gb|EKA11968.1| GTP pyrophosphokinase [Streptococcus sp. GMD4S]
 gi|404472538|gb|EKA16958.1| GTP pyrophosphokinase [Streptococcus sp. GMD2S]
 gi|404472859|gb|EKA17256.1| GTP pyrophosphokinase [Streptococcus sp. GMD1S]
          Length = 738

 Score =  333 bits (855), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 191/494 (38%), Positives = 293/494 (59%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YL+  ++  V++AL+ A + H GQ R+SGEP+IIHP++VA IL +L+LD  ++A G 
Sbjct: 16  TREYLTKEDVAFVQKALIYAVDCHSGQFRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT+  T + +E EFG  VR IV+G   V+KLGK++ K    S+++  A++ R+M
Sbjct: 76  LHDVVEDTDA-TLDDLEREFGHDVRIIVDG---VTKLGKVEYK----SLEEQLAENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM+E++RVI+VKL+DRLHNMRTL H+   KQ  I+ ET++++APLA  LG+  +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISSVKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y N  ++ K+   + +  +E E  ++E    ++ K+ED  +     +K +I   
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLED--YATERNLKGKIYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSIY+ +   +    E+  +  +R I+              Q   Y +LG VH +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHELW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA  K NGYQS+HTT    +Y     +E QIRT+EM  +AE G+AAH++ 
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  + G V                 N+   A+ ++W+  + E Q++      ++EFVD++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDSV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             + L   ++VFTP G +++LPK +  +D+AY IHT++G K   AKVNG +V  T  L  
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445

Query: 617 AEVVEIITYNVSFS 630
            + VEIIT   SF 
Sbjct: 446 GDQVEIITNPNSFG 459


>gi|82751232|ref|YP_416973.1| GTP pyrophosphokinase [Staphylococcus aureus RF122]
 gi|82656763|emb|CAI81192.1| GTP pyrophosphokinase [Staphylococcus aureus RF122]
          Length = 736

 Score =  333 bits (855), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 193/498 (38%), Positives = 292/498 (58%), Gaps = 49/498 (9%)

Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
           E L    SYLS +E E V ++  +A+EAH GQ R++G P+I+HP++VA IL E+ LD  +
Sbjct: 18  EVLHKAKSYLSADEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPT 77

Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
           I AG LHD +EDT   TFE ++E F   V RIV+G TK+ K+ K + K E       +A+
Sbjct: 78  IVAGFLHDVIEDTPY-TFEDVKEMFNEEVARIVDGVTKLKKV-KYRSKEEQ------QAE 129

Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
           + R++F+A+ ++VRVI+VKLADRLHNMRTL  MP  KQ  I+ ETL+++APLA  LG+  
Sbjct: 130 NHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIYAPLAHRLGINT 189

Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
           IK ELE+ +  Y +   Y     R+ +L K+   E E   +  + +I  +  +D M ++ 
Sbjct: 190 IKWELEDTALRYIDNVQYF----RIVNLMKKKRSEREAYIETAIDRIRTE--MDRMNIEG 243

Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
           +I    K  YSIY+ ++K +   +++  +  +R+I+            +    CY +LGL
Sbjct: 244 DINGRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV------------NSINDCYAILGL 291

Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
           VH +W P+P   KDYIA PK N YQSLHTT++     +   LE+QIRT +M  IAE G+A
Sbjct: 292 VHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVVG---PNGDPLEIQIRTYDMHEIAEHGVA 348

Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
           AH++ +                  GK V   +     +++WL   +E  E    +  ++E
Sbjct: 349 AHWAYK-----------------EGKKVSEKDQTYQNKLNWL---KELAEADHTSSDAQE 388

Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
           F++T+  DL   +V+ FTP  ++  LP GA  +D+AY IH+E+GNKM+ AKVNG +V   
Sbjct: 389 FMETLKYDLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPID 448

Query: 612 HVLANAEVVEIITYNVSF 629
           ++L   ++VEI T   S+
Sbjct: 449 YILQTGDIVEIRTSKHSY 466


>gi|19746884|ref|NP_608020.1| (p)ppGpp synthetase [Streptococcus pyogenes MGAS8232]
 gi|19749128|gb|AAL98519.1| (p)ppGpp synthetase [Streptococcus pyogenes MGAS8232]
          Length = 739

 Score =  333 bits (854), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 186/491 (37%), Positives = 294/491 (59%), Gaps = 49/491 (9%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++  ++ELV++AL  A  AH  Q R+SGEP+I+HP++VA IL +L LD  ++A G LHD
Sbjct: 19  YMTDGDVELVQKALDYATAAHFYQVRKSGEPYIVHPIQVAAILADLHLDAVTVACGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            VEDT++ T + IE +FG   R IV+G   V+KLGK++ K+    +    A++ R+M +A
Sbjct: 79  VVEDTDI-TLDEIEADFGQDARDIVDG---VTKLGKVEYKSHEEQL----AENHRKMLMA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M++++RVI+VKLADRLHNMRTL H+   KQ  I+ ET++++APLA  LG+ +IK ELE+L
Sbjct: 131 MSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELEDL 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           +F Y N  ++ K    ++ + KE  +E E   + ++ K++   +     +  ++    K 
Sbjct: 191 AFRYLNETEFYK----ISHMMKEKRREREALVEAIVSKVK--TYTTQQGLFGDVYGRPKH 244

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIY+ +   +   +++  +  +R +++             Q   Y ++G +H +W P+
Sbjct: 245 IYSIYRKMRDKKKRFDQIFDLIAIRCVME------------TQSDVYAMVGYIHELWRPM 292

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK NGYQS+HTT    +Y     +E+QIRT++M  +AE G+AAH++ +  
Sbjct: 293 PGRFKDYIAAPKANGYQSIHTT----VYGPKGPIEIQIRTKDMHQVAEYGVAAHWAYK-- 346

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
                       +  RGK   +N A  A+ ++W+  + E Q+    N  + +FVD++  D
Sbjct: 347 ------------KGVRGK---VNQAEQAVGMNWIKELVELQD--ASNGDAVDFVDSVKED 389

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           +   R++VFTP G ++ LPK +  +D+AY IHT+IG K   AKVNG +V  T  L   +V
Sbjct: 390 IFSERIYVFTPTGAVQELPKESGPIDFAYAIHTQIGEKATGAKVNGRMVPLTAKLKTGDV 449

Query: 620 VEIITYNVSFS 630
           VEIIT   SF 
Sbjct: 450 VEIITNANSFG 460


>gi|322392295|ref|ZP_08065756.1| GTP diphosphokinase [Streptococcus peroris ATCC 700780]
 gi|321144830|gb|EFX40230.1| GTP diphosphokinase [Streptococcus peroris ATCC 700780]
          Length = 738

 Score =  333 bits (854), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 196/494 (39%), Positives = 289/494 (58%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YLS  ++  V +AL+ A E H GQ R+SGE +IIHP++VA IL +L+LD  S+A G 
Sbjct: 16  TQKYLSKEDVAFVHKALVYAVECHSGQYRKSGEHYIIHPIQVAGILAKLKLDAVSVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT+  T + +E EFG  VR IV+G   V+KLGK++ K    S +   A++ R+M
Sbjct: 76  LHDVVEDTDA-TLDDLEREFGHDVRVIVDG---VTKLGKVEYK----SFEKQLAENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM++++RVI+VKLADRLHNMRTL H+   KQ  I+ ET++++APLA  LG+  +K EL
Sbjct: 128 LMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISSVKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y N  ++ K    +  L KE  +E E     ++KK+E  ++     +  +I   
Sbjct: 188 EDLSFRYLNPTEFYK----ITTLMKEKRQEREALVDEVVKKLE--EYSSERNLTGKIYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSIY+ +   +   +E+  +  +R I+              Q   Y +LG VH +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFDEIYDLIAIRCIL------------DTQSDVYAMLGYVHELW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA  K NGYQS+HTT    +Y     +E QIRT+EM  +AE G+AAH++ 
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  + G V                 N+   A+ ++W+  + E Q++   +  ++EFVDT+
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---SDDAKEFVDTV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             + L   ++VFTP G +++LPK +  +D+AY IHT+IG K   AKVNG +V  T  L  
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKIGEKATGAKVNGRMVPLTTKLKT 445

Query: 617 AEVVEIITYNVSFS 630
            + VEIIT   SF 
Sbjct: 446 GDQVEIITNPNSFG 459


>gi|315924148|ref|ZP_07920374.1| GTP diphosphokinase [Pseudoramibacter alactolyticus ATCC 23263]
 gi|315622550|gb|EFV02505.1| GTP diphosphokinase [Pseudoramibacter alactolyticus ATCC 23263]
          Length = 723

 Score =  333 bits (854), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 194/482 (40%), Positives = 280/482 (58%), Gaps = 60/482 (12%)

Query: 148 LVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVV 207
           ++ RA  LA EAH+GQKR+SGE +IIHPV VA IL E ++D E+I A L+HD +EDT+  
Sbjct: 28  MIMRAFQLADEAHEGQKRKSGEEYIIHPVAVAYILAEYKMDTETICAALMHDVIEDTDY- 86

Query: 208 TFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVI 267
           T ++I   F A +  +VEG TK+ K+       E  S ++ +A+ LR+M +AM+ ++RVI
Sbjct: 87  THKQIATIFNARIADLVEGVTKIGKI-------EYQSKEESQAEYLRKMVMAMSRDIRVI 139

Query: 268 IVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAE 327
           ++KL DRLHNMRTL +M P KQ   A ETL ++AP+A  LG+  IK ELE+LS  Y + E
Sbjct: 140 LIKLVDRLHNMRTLEYMNPAKQQEKARETLDIYAPIANRLGIQAIKGELEDLSLKYLDPE 199

Query: 328 DYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAV 387
            Y  + ++V    +  E+ +++   IL  KI      D   +  +I    K  YSIY+ +
Sbjct: 200 GYYDLVKKVKARKQVREEYVDQVIVILKAKI------DETGIPCKIYGRSKHFYSIYRKM 253

Query: 388 LKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYI 447
                  +E+  +  +R+I+               + CY VLGLVH  W PIP   KDYI
Sbjct: 254 KAQHRQFDEIYDLIAVRVIV------------DSIKDCYGVLGLVHTEWKPIPGRFKDYI 301

Query: 448 ATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTG 502
           A PKPN YQS+HTT+I     PF        EVQIRT+EM  +AE GIAAH+        
Sbjct: 302 AMPKPNMYQSIHTTVIGPNGDPF--------EVQIRTKEMHRVAEYGIAAHW-------- 345

Query: 503 LVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLG 562
                    +   GKT    NA+   RI+W+  I EWQ+E      + + ++TI  DLL 
Sbjct: 346 ---------KYKEGKT-GEKNAHYEKRIAWIRQIMEWQQEL---DNAGDLLETIKVDLLN 392

Query: 563 SRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEI 622
             V+VF+P+G++  LP G+  +D+AY IH++IG+  V A+VNG +V   + L N ++VE+
Sbjct: 393 EEVYVFSPKGQVFELPMGSCPLDFAYRIHSDIGDTCVGARVNGKIVPLNYTLNNGDIVEV 452

Query: 623 IT 624
           +T
Sbjct: 453 MT 454


>gi|81300186|ref|YP_400394.1| metal dependent phosphohydrolase [Synechococcus elongatus PCC 7942]
 gi|81169067|gb|ABB57407.1| metal dependent phosphohydrolase [Synechococcus elongatus PCC 7942]
          Length = 779

 Score =  333 bits (854), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 200/477 (41%), Positives = 274/477 (57%), Gaps = 48/477 (10%)

Query: 148 LVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVV 207
           L+ RA   A+  H+GQ R SGEP+I HPV VA +L +L      I AG LHD VEDT V 
Sbjct: 59  LIARAFRFAYSLHEGQYRASGEPYIAHPVAVAGLLRDLGGSAAVICAGFLHDVVEDTEV- 117

Query: 208 TFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVI 267
           T E IEE FGA VR++VEG TK+SK      K E       +A++ R+MFLAM +++RVI
Sbjct: 118 TPEEIEERFGAEVRQLVEGVTKLSKF-NFSSKTEQ------QAENFRRMFLAMAQDIRVI 170

Query: 268 IVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAE 327
           +VKLADRLHNMRTL H+   KQ  IA ET+ +FAPLA  LG+ ++K ELE+LSF Y +AE
Sbjct: 171 LVKLADRLHNMRTLEHLASTKQKRIAKETMDIFAPLANRLGIGRVKWELEDLSFKYLDAE 230

Query: 328 DYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAV 387
            Y  ++  VA+   + E  LE++ +IL      D+   +     ++    K  YSIY+ +
Sbjct: 231 QYRSIQGHVAEKRADREARLEQSVQILR-----DRLSQIGIEPVDVSGRPKHLYSIYRKM 285

Query: 388 LKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYI 447
              +   +E+  +A LRII+            +    CY  L +VH  + PIP   KDYI
Sbjct: 286 QMQQKEFHEIFDVAALRIIV------------NSNDECYRALAVVHDAFRPIPGRFKDYI 333

Query: 448 ATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHA 507
             PKPN YQSLHTT+I     S   LE+QIRT EM  IAE GIAAH+             
Sbjct: 334 GLPKPNRYQSLHTTVIGL---SGRPLEIQIRTLEMHRIAEYGIAAHWK-----------Y 379

Query: 508 RPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSRVFV 567
           + +G S  GK    +      + +WL  + EWQ +      ++E+++ I  +L    V+V
Sbjct: 380 KESGGSA-GKFSTEDE-----KFTWLRQLLEWQHDL---KDAKEYLENIKDNLFDEDVYV 430

Query: 568 FTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
           FTP G++  L + +T VD+AY IHTE+GN+   AKVNG +V     L N ++VEI+T
Sbjct: 431 FTPGGDVIALAQRSTPVDFAYRIHTEVGNRCAGAKVNGRIVPLETRLNNGDIVEILT 487


>gi|389577382|ref|ZP_10167410.1| (p)ppGpp synthetase, RelA/SpoT family [Eubacterium cellulosolvens
           6]
 gi|389312867|gb|EIM57800.1| (p)ppGpp synthetase, RelA/SpoT family [Eubacterium cellulosolvens
           6]
          Length = 777

 Score =  333 bits (854), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 197/507 (38%), Positives = 295/507 (58%), Gaps = 60/507 (11%)

Query: 126 SPERLWEDLRPTISYLSP-NELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
           SP+ L+  L  ++    P +++ ++ +A  +A +AH GQKR+SGE +IIHP+ V  IL +
Sbjct: 41  SPDELYRTLISSVRKYHPSDDISMIEKAYKIASDAHQGQKRKSGEDYIIHPLCVGIILAD 100

Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
           LELD E+I +GLLHD VEDT ++T E I  +FG  V  IV+G TK+ +L   K K E   
Sbjct: 101 LELDKETIVSGLLHDVVEDT-IMTKEEIAGQFGNEVAEIVDGVTKLGQLNYSKDKVEE-- 157

Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
               +A++LR+MFLAM +++RVI+VKLADRLHNMRTL +M P KQ   A ET+ +++P+A
Sbjct: 158 ----QAENLRKMFLAMAKDIRVIMVKLADRLHNMRTLKYMRPEKQLEKARETIDIYSPIA 213

Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
           + LG+ ++K+EL++LS  Y     Y  + R++     E    + +    + KKI+D    
Sbjct: 214 QRLGITKVKNELDDLSLKYLEPAAYYDLVRQINGKKSERTAFVAQIVDDVKKKIDD---- 269

Query: 365 DLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
               ++ +I    K  +SIYK ++    +++++  +  +RII++              + 
Sbjct: 270 --AGLEAQISGRAKHFFSIYKKMVNQNKTLDQIYDLFAVRIIVE------------TVRD 315

Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRT 479
           CY  LG++H ++TPIP   KDYIA PKPN YQSLHTTLI     PF        E+QIRT
Sbjct: 316 CYAALGVIHEMYTPIPGRFKDYIAMPKPNMYQSLHTTLIGPQGKPF--------EIQIRT 367

Query: 480 EEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREW 539
            +M  +AE GIAAH+  +    G     +  G  P  +   LN         WL  I EW
Sbjct: 368 FDMHRVAEYGIAAHWKYKEASDG-----KKTG--PEQEEEKLN---------WLRQILEW 411

Query: 540 QEEFVGNMTSREFVDTITRD--LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNK 597
           Q++   N   REF+  +  D  L    V+VF+P G++K LP G+  +D+AY +H+ +GN+
Sbjct: 412 QQDMSDN---REFMSLLKSDLNLFNENVYVFSPAGDVKTLPAGSCTIDFAYAVHSAVGNR 468

Query: 598 MVAAKVNGNLVSPTHVLANAEVVEIIT 624
           MV A+VNG LV     L N + VE++T
Sbjct: 469 MVGARVNGKLVPIETELHNGDRVEVVT 495


>gi|417936617|ref|ZP_12579926.1| RelA/SpoT family protein [Streptococcus infantis X]
 gi|343400551|gb|EGV13068.1| RelA/SpoT family protein [Streptococcus infantis X]
          Length = 738

 Score =  333 bits (854), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 192/494 (38%), Positives = 293/494 (59%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YLS  ++  V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD  ++A G 
Sbjct: 16  TQKYLSKEDVAFVHKALVYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT+  T + +E EFG  VR IV+G   V+KLGK++ K    S+++  A++ R+M
Sbjct: 76  LHDVVEDTDA-TLDDLEREFGHDVRVIVDG---VTKLGKVEYK----SIEEQLAENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM+E++RVI+VKL+DRLHNMRTL+H+   KQ  I+ ET++++APL+  LG+  +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLTHLRKDKQERISRETMEIYAPLSHRLGISSVKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y N  ++ K+   + +  +E E  ++E    ++ K+E  ++     +  +I   
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRQEREALVDE----VVTKLE--EYSSERNLTGKIYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSIY+ +   +    E+  +  +R I+              Q   Y +LG VH +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHELW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA  K NGYQS+HTT    +Y     +E QIRT+EM  +AE G+AAH++ 
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWA- 344

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
             +  G+ G               +N+   A+ ++W+  + E Q++      ++EFVDT+
Sbjct: 345 --YKKGMKGQ--------------VNSKESAIGMNWIKEMMELQDQ---ADDAKEFVDTV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             + L   ++VFTP G +++LPK +  +D+AY IHT+IG K   AKVNG +V  T  L  
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKIGEKATGAKVNGRMVPLTTKLKT 445

Query: 617 AEVVEIITYNVSFS 630
            + VEIIT   SF 
Sbjct: 446 GDQVEIITNPNSFG 459


>gi|224476731|ref|YP_002634337.1| GTP pyrophosphokinase [Staphylococcus carnosus subsp. carnosus
           TM300]
 gi|222421338|emb|CAL28152.1| GTP pyrophosphokinase [Staphylococcus carnosus subsp. carnosus
           TM300]
          Length = 729

 Score =  333 bits (854), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 197/493 (39%), Positives = 290/493 (58%), Gaps = 53/493 (10%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           SYLS  E E V ++  +A+EAH GQ R++G P+I+HP++VA IL E+ LD  +I AG LH
Sbjct: 18  SYLSEEEYEHVLKSYHIAYEAHQGQFRKNGLPYIMHPIQVAGILTEMHLDGPTIVAGFLH 77

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D +EDT   TF+ ++  F   V  IVEG TK+ K+ K + K E       +A++ R++F+
Sbjct: 78  DVIEDTPY-TFDDVKAMFNDEVAMIVEGVTKLKKV-KYRSKEEQ------QAENHRKLFI 129

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           A+ ++VRVI+VKLADRLHNMRTL  MP  KQ  I+ ETL+++APLA  LG+  IK ELE+
Sbjct: 130 AIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISKETLEIYAPLAHRLGINTIKWELED 189

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEE--ANKILMKKIEDDQFLDLMTVKTEIRSV 376
           ++  Y +   Y     R+ +L K+   E E   AN I     E    +D M +  EI   
Sbjct: 190 IALRYIDGVQYF----RIVNLMKKKRSEREAYIANAIDRISAE----MDKMHISGEINGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSIY+ ++K +   +++  +  +RII+               + CY VLGLVH +W
Sbjct: 242 PKHIYSIYRKMMKQKKQFDQIFDLLAVRIIV------------DSIKDCYAVLGLVHTLW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA PK N YQSLHTT++     +   LE+QIRT+EM  IAE G+AAH++ 
Sbjct: 290 KPMPGRFKDYIAMPKQNMYQSLHTTVVG---PNGDPLEIQIRTQEMHEIAEHGVAAHWAY 346

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +                  GK V  +N+  A ++SWL  + E  +    N  ++EF++++
Sbjct: 347 K-----------------EGKKVTDDNSGYAQKLSWLKDLAEADK--TAN-DAQEFMESL 386

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             DL   +V+ FTP+ ++  LP GA  +D+AY +H+E+GNKM+ AKVNG +    +VL  
Sbjct: 387 KFDLQSDKVYAFTPQSDVIELPYGAVPIDFAYAVHSEVGNKMIGAKVNGKIEPIDYVLQT 446

Query: 617 AEVVEIITYNVSF 629
            ++VEI T   S+
Sbjct: 447 GDIVEIRTSKHSY 459


>gi|358464228|ref|ZP_09174194.1| GTP diphosphokinase [Streptococcus sp. oral taxon 058 str. F0407]
 gi|357067256|gb|EHI77382.1| GTP diphosphokinase [Streptococcus sp. oral taxon 058 str. F0407]
          Length = 738

 Score =  333 bits (854), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 190/494 (38%), Positives = 294/494 (59%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YLS  ++  V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD  ++A G 
Sbjct: 16  TQKYLSKEDVAFVHKALVYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT+  T + +E+EFG  VR IV+G   V+KLGK++ K    S+++  A++ R+M
Sbjct: 76  LHDVVEDTDA-TLDDLEQEFGHDVRIIVDG---VTKLGKVEYK----SIEEQLAENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM+E++RVI+VKL+DRLHNMRTL+H+   KQ  I+ ET++++APLA  LG+  +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLNHLRKDKQERISRETMEIYAPLAHRLGISSVKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y N  ++ K+   + +  +E E  ++E    ++ K+E  ++     +K +I   
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLE--EYTSERNLKGKIYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSIY+ +   +    E+  +  +R I+              Q   Y +LG VH +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHELW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA  K NGYQS+HTT    +Y     +E QIRT+EM  +AE G+AAH++ 
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  + G V                 N+   A+ ++W+  + E Q++      ++EFV+++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMIELQDQ---ADDAKEFVESV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             + L   ++VFTP G +++LPK +  +D+AY IHT++G K   AKVNG +V  T  L  
Sbjct: 386 KEEYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445

Query: 617 AEVVEIITYNVSFS 630
            + VEI+T   SF 
Sbjct: 446 GDQVEIVTNPNSFG 459


>gi|335029122|ref|ZP_08522634.1| GTP diphosphokinase [Streptococcus infantis SK1076]
 gi|334269523|gb|EGL87940.1| GTP diphosphokinase [Streptococcus infantis SK1076]
          Length = 738

 Score =  333 bits (854), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 195/494 (39%), Positives = 290/494 (58%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YLS  ++  V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD  ++A G 
Sbjct: 16  TQQYLSKEDVAFVHKALVYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT+  T + +E EFG  VR IV+G   V+KLGK++ K    S ++  A++ R+M
Sbjct: 76  LHDVVEDTDA-TLDDLEREFGHDVRVIVDG---VTKLGKVEYK----SFEEQLAENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM+E++RVI+VKL+DRLHNMRTL H+   KQ  I+ ET++++APLA  LG+  +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISSVKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y N  ++ K+   + +  +E E  ++E    ++ K+E+      +T K  I   
Sbjct: 188 EDLSFRYLNPTEFYKISHMMKEKRQEREALVDE----VVTKLEEYSSERHLTGK--IYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSIY+ +   +    E+  +  +R I+              Q   Y +LG VH +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHELW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA  K NGYQS+HTT    +Y     +E QIRT+EM  +AE G+AAH++ 
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  + G V                 N+   A+ ++W+  + E Q++      ++EFVDT+
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDTV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             + L   ++VFTP G +++LPK +  +D+AY IHT+IG K   AKVNG +V  T  L  
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKIGEKATGAKVNGRMVPLTTKLKT 445

Query: 617 AEVVEIITYNVSFS 630
            + VEIIT   SF 
Sbjct: 446 GDQVEIITNPNSFG 459


>gi|227871732|ref|ZP_03990140.1| GTP diphosphokinase, partial [Oribacterium sinus F0268]
 gi|227842420|gb|EEJ52642.1| GTP diphosphokinase [Oribacterium sinus F0268]
          Length = 708

 Score =  333 bits (854), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 201/506 (39%), Positives = 299/506 (59%), Gaps = 60/506 (11%)

Query: 127 PERLWEDLRPTI-SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGEL 185
           PE L + L   + SY   ++L ++ +A  +A E H  QKR+SGEP+IIHP+ VA IL +L
Sbjct: 19  PEELLKILLANVRSYHPSDDLSMIEKAYEVAKEQHKDQKRKSGEPYIIHPLCVAIILSDL 78

Query: 186 ELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSV 245
           E+D E+IAAGLLHD VEDT + + +++EE F   V  +V+G TK+++L      N N   
Sbjct: 79  EMDKETIAAGLLHDVVEDTGM-SLKQVEEMFNPDVAVLVDGVTKLTQL------NLNTDK 131

Query: 246 QDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAK 305
            +++A++LR+MF++M +++RVII+KLADRLHN+RTL +  P K+   A E+L++++PLA 
Sbjct: 132 VELQAENLRKMFVSMAKDIRVIIIKLADRLHNLRTLEYQSPEKRKEKARESLEIYSPLAD 191

Query: 306 LLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLD 365
            LG+ +IK E+++LS  Y   E Y  +  +V   +K   +E E  +KI+    E  + ++
Sbjct: 192 RLGISKIKIEMDDLSLKYLEPEVYYDLAEKVH--FKREVRE-ERIDKIVQ---EVREHIE 245

Query: 366 LMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQIC 425
              ++  I+   K  +SIYK ++    +I+++  +  +RII+               + C
Sbjct: 246 ESGIRANIKGRIKHFFSIYKKMVNQNKTIDQIYDLFAIRIIV------------DTVKDC 293

Query: 426 YHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTE 480
           Y VLG +H ++TPIP   KDYIA PKPN YQSLHTT+I     PF        E+QIRT 
Sbjct: 294 YAVLGFIHKLYTPIPGRFKDYIAMPKPNMYQSLHTTVIGKDGVPF--------EIQIRTF 345

Query: 481 EMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQ 540
           EM   AE GIAAH+             +  G S    T      N   ++ WL+ I EWQ
Sbjct: 346 EMHRTAEFGIAAHWK-----------YKEEGGSENKAT-----ENEMTKMKWLSEILEWQ 389

Query: 541 EEFVGNMTSREFVDTITRD--LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKM 598
           ++      S+EF+  +  D  L    V+ FTP G++KNLP G+T +D+AY IH+ +GNKM
Sbjct: 390 KD---ESDSKEFMKMVKSDLSLFNESVYCFTPTGDVKNLPAGSTPIDFAYSIHSAVGNKM 446

Query: 599 VAAKVNGNLVSPTHVLANAEVVEIIT 624
           V AKVN  LV   +VL N + V+IIT
Sbjct: 447 VGAKVNDKLVPIEYVLHNGDRVDIIT 472


>gi|315038166|ref|YP_004031734.1| ppGpp synthetase [Lactobacillus amylovorus GRL 1112]
 gi|325956617|ref|YP_004292029.1| ppGpp synthetase [Lactobacillus acidophilus 30SC]
 gi|385817505|ref|YP_005853895.1| ppGpp synthetase [Lactobacillus amylovorus GRL1118]
 gi|312276299|gb|ADQ58939.1| ppGpp synthetase [Lactobacillus amylovorus GRL 1112]
 gi|325333182|gb|ADZ07090.1| ppGpp synthetase [Lactobacillus acidophilus 30SC]
 gi|327183443|gb|AEA31890.1| ppGpp synthetase [Lactobacillus amylovorus GRL1118]
          Length = 746

 Score =  333 bits (854), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 195/485 (40%), Positives = 281/485 (57%), Gaps = 49/485 (10%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++  ++  V +A   A +AH GQKR SG+P+IIHP +VA  L  L LD +++AAG LHD
Sbjct: 19  YMNDKQVAFVEKAYEFANKAHAGQKRASGQPYIIHPTQVAGTLATLGLDPDTVAAGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
           TVEDT  VT + ++E+FG  V  IV+G TK++K        E  S Q+  A++ R+M +A
Sbjct: 79  TVEDT-PVTNDELKEKFGEDVAFIVDGVTKLNKY-------EYKSHQEFLAENHRKMLIA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M +++RVI+VKLADRLHNM TL H+ P KQ  IA+ET+ ++APLA  LG+  IK ELE++
Sbjct: 131 MAKDLRVIMVKLADRLHNMHTLQHLRPDKQRRIASETMDIYAPLADRLGIGTIKWELEDM 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           SF Y N E Y ++   +     + EK + +  K L K       LD + +K EI    K 
Sbjct: 191 SFHYLNPEAYYRIVNLMDVKRSQREKYIADTIKTLKKT------LDELGIKYEIYGRPKH 244

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIYK ++      +E+  +  +R+I+K              + CY VLG VH  W P+
Sbjct: 245 IYSIYKKMVNKHKDFDEIYDLLAVRVIVK------------NVRDCYAVLGAVHTEWKPM 292

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK NGYQSLHTT+I         LE+QIRTE M  +AE G+AAH++ +  
Sbjct: 293 PGRFKDYIAMPKVNGYQSLHTTIIG---PGGRPLEIQIRTEAMHQVAEYGVAAHWAYK-- 347

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
                          RG    +   +   ++  +  I E ++E      + EF+ ++  D
Sbjct: 348 ---------------RGNFNGVEATSSGEKLDMVREILELKDE---TKDAGEFMKSVKSD 389

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           +   RV+VFTP+GE+  LPKG+  +D+AY IHT++G+  V AKVN  LV   + L N +V
Sbjct: 390 IFSDRVYVFTPKGEVYELPKGSVTLDFAYAIHTQVGSHAVGAKVNNKLVPLDYKLRNGDV 449

Query: 620 VEIIT 624
           +EI+T
Sbjct: 450 IEIMT 454


>gi|357237402|ref|ZP_09124743.1| RelA/SpoT family protein [Streptococcus ictaluri 707-05]
 gi|356753592|gb|EHI70695.1| RelA/SpoT family protein [Streptococcus ictaluri 707-05]
          Length = 739

 Score =  333 bits (854), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 188/495 (37%), Positives = 292/495 (58%), Gaps = 51/495 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T +YL+  ++  V++AL  A  AH  Q R+SGEP+I+HP++VA IL +L LD  ++A G 
Sbjct: 16  TANYLNEKDVAFVKKALDYATAAHFYQIRKSGEPYIVHPIQVAAILADLHLDAVTVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT++ T E IE +FG  VR IV+G   V+KLGK++ K+    +    A++ R+M
Sbjct: 76  LHDVVEDTDI-TLENIEADFGKDVRDIVDG---VTKLGKVEYKSHEEQL----AENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM++++RVI+VKLADRLHNMRTL H+   KQ  I+ ET++++APLA  LG+ +IK EL
Sbjct: 128 LMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEE-ANKILMKKIEDDQFLDLMTVKTEIRS 375
           E+L+F Y N  ++ K+   +++  +E E  +E+   KI     E   F D       +  
Sbjct: 188 EDLAFRYLNEAEFYKISHMMSEKRREREALVEDIVTKIKTYTTEQGLFGD-------VYG 240

Query: 376 VCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGI 435
             K  YSIY+ +   +   +++  +  +R +++             Q   Y ++G +H +
Sbjct: 241 RPKHIYSIYRKMRDKKKRFDQIFDLIAIRCVME------------TQSDVYAMVGYIHEL 288

Query: 436 WTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYS 495
           W P+P   KDYIA PK NGYQS+HTT    +Y     +E+QIRT++M  +AE G+AAH++
Sbjct: 289 WRPMPGRFKDYIAAPKANGYQSIHTT----VYGPKGPIEIQIRTKDMHQVAEYGVAAHWA 344

Query: 496 GRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDT 555
            +              +  RGK   +N A   + ++W+  + E Q+    N  + +FVD+
Sbjct: 345 YK--------------KGVRGK---VNQAEQKMSMNWIKELVELQD--ASNGDAVDFVDS 385

Query: 556 ITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLA 615
           +  D+   R++VFTP G ++ LPK +  +D+AY IHT++G K   AKVNG +V  T  L 
Sbjct: 386 VKEDIFSERIYVFTPTGAVQELPKESGPIDFAYAIHTQVGEKATGAKVNGRMVPLTAKLK 445

Query: 616 NAEVVEIITYNVSFS 630
             +VVEI+T   SF 
Sbjct: 446 TGDVVEIVTNPNSFG 460


>gi|309792557|ref|ZP_07687019.1| RelA/SpoT family protein [Oscillochloris trichoides DG-6]
 gi|308225371|gb|EFO79137.1| RelA/SpoT family protein [Oscillochloris trichoides DG6]
          Length = 809

 Score =  333 bits (854), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 199/488 (40%), Positives = 286/488 (58%), Gaps = 49/488 (10%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
            YL   + +L+RRA  LA  AH GQ R+SGE +I HPV VA IL EL LD ESIAA LLH
Sbjct: 95  QYLPGGDADLIRRAYALALIAHAGQYRQSGEAYIDHPVAVASILLELRLDAESIAAALLH 154

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT V   + +  +F   +  +V+G TK+S L       EN + ++++A   R++ +
Sbjct: 155 DVVEDTGV-QLDLVRNQFNGCIAHLVDGVTKLSGL-------ENKTKEELQAGSYRKLII 206

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           A  ++ RVI++KLADRLHNMRTL   PPHKQ  +A ETL ++APLA  LGM+Q+KSELE+
Sbjct: 207 ATADDPRVILIKLADRLHNMRTLGATPPHKQRRVARETLDIYAPLAHRLGMWQVKSELED 266

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
           L+F   N + Y ++ + +    +  E+ ++   K L   +E +       +  ++    K
Sbjct: 267 LAFKAMNPDRYQEIAQGLTLRKEARERIIQRVIKRLNDALEKE------GISAQVSGRPK 320

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPK-PCSGVGPLCSPQQICYHVLGLVHGIWT 437
             YSI++ + +    +  +     +R+II+ + P   VG       ICY VLG+VH +WT
Sbjct: 321 HIYSIWRKMDRKGLPLERIYDQLAVRVIIQERDPERAVG-------ICYRVLGVVHMLWT 373

Query: 438 PIPRAMKDYIATPKPNGYQSLHTT-LIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
           P+     DYIA PK + YQSLHTT LIP         EVQIRTEEM  IAE GIAAH+  
Sbjct: 374 PVLSEFDDYIAVPKESSYQSLHTTVLIP----GGTPCEVQIRTEEMHQIAEHGIAAHWRY 429

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +   T             RG     ++ N   +I WL  +  W+ E      +REFV++ 
Sbjct: 430 KEGFT-------------RG-----SDQNYEAKIKWLRELISWRIELT---DAREFVESF 468

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             + L  +V++FTP+G+I +LP+G+T VD+AY IH+E+GNK + AKVNG +V   + L N
Sbjct: 469 KTE-LEEQVYIFTPKGKIIDLPEGSTPVDFAYRIHSEVGNKCIGAKVNGRIVPLDYHLRN 527

Query: 617 AEVVEIIT 624
            E+VE++T
Sbjct: 528 GEIVEVMT 535


>gi|315658096|ref|ZP_07910968.1| GTP diphosphokinase [Staphylococcus lugdunensis M23590]
 gi|315496425|gb|EFU84748.1| GTP diphosphokinase [Staphylococcus lugdunensis M23590]
          Length = 758

 Score =  333 bits (854), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 191/492 (38%), Positives = 290/492 (58%), Gaps = 49/492 (9%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           SYLSP++ + V ++  LA+EAH GQ R++G P+I+HP++VA IL E+ LD  +I AG LH
Sbjct: 47  SYLSPDDYQYVLKSYHLAYEAHQGQFRKNGLPYIMHPIQVAGILTEMRLDGPTIVAGFLH 106

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D +EDT   TF+ ++E F   + RIV+G TK+ K+ K + K E       +A++ R++F+
Sbjct: 107 DVIEDT-AYTFDDVKEMFNEEIARIVDGVTKLKKV-KYRSKEEQ------QAENHRKLFI 158

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           A+ ++VRVI+VKLADRLHNMRTL  MP  KQ  I+ ETL+++APLA  LG+  IK ELE+
Sbjct: 159 AIAKDVRVILVKLADRLHNMRTLKAMPRDKQIRISKETLEIYAPLADRLGINTIKWELED 218

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
            +  Y ++  Y     R+ +L K+   E E   K  +  I  D  +  M +K EI    K
Sbjct: 219 TALRYIDSVQYF----RIVNLMKKKRSEREAYIKNAIDMI--DAEMIKMKIKGEINGRPK 272

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIY+ ++K +   +++  +  +R+I+            +    CY +LGLVH +W P
Sbjct: 273 HIYSIYRKMMKQKKQFDQIFDLLAIRVIV------------NSINDCYAILGLVHTLWKP 320

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PK N YQSLHTT++     +   LE+QIRT EM  IAE G+AAH++ + 
Sbjct: 321 MPGRFKDYIAMPKQNMYQSLHTTVVG---PNGDPLEIQIRTYEMHEIAEHGVAAHWAYK- 376

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                            GKTV     +   +++WL   +E  E    +  ++EF++++  
Sbjct: 377 ----------------EGKTVDEKTQDFQNKLNWL---KELAEADHTSNDAQEFMESLKY 417

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           DL   +V+ FTP  ++  LP GA  +D+AY IH+E+GNKM+ AK NG +V   +V+   +
Sbjct: 418 DLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKANGKIVPIDYVIQTGD 477

Query: 619 VVEIITYNVSFS 630
           ++EI T   S+ 
Sbjct: 478 IIEIRTSKHSYG 489


>gi|56750188|ref|YP_170889.1| GTP pyrophosphokinase [Synechococcus elongatus PCC 6301]
 gi|56685147|dbj|BAD78369.1| GTP pyrophosphokinase [Synechococcus elongatus PCC 6301]
          Length = 764

 Score =  333 bits (854), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 200/477 (41%), Positives = 274/477 (57%), Gaps = 48/477 (10%)

Query: 148 LVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVV 207
           L+ RA   A+  H+GQ R SGEP+I HPV VA +L +L      I AG LHD VEDT V 
Sbjct: 44  LIARAFRFAYSLHEGQYRASGEPYIAHPVAVAGLLRDLGGSAAVICAGFLHDVVEDTEV- 102

Query: 208 TFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVI 267
           T E IEE FGA VR++VEG TK+SK      K E       +A++ R+MFLAM +++RVI
Sbjct: 103 TPEEIEERFGAEVRQLVEGVTKLSKF-NFSSKTEQ------QAENFRRMFLAMAQDIRVI 155

Query: 268 IVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAE 327
           +VKLADRLHNMRTL H+   KQ  IA ET+ +FAPLA  LG+ ++K ELE+LSF Y +AE
Sbjct: 156 LVKLADRLHNMRTLEHLASTKQKRIAKETMDIFAPLANRLGIGRVKWELEDLSFKYLDAE 215

Query: 328 DYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAV 387
            Y  ++  VA+   + E  LE++ +IL      D+   +     ++    K  YSIY+ +
Sbjct: 216 QYRSIQGHVAEKRADREARLEQSVQILR-----DRLSQIGIEPVDVSGRPKHLYSIYRKM 270

Query: 388 LKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYI 447
              +   +E+  +A LRII+            +    CY  L +VH  + PIP   KDYI
Sbjct: 271 QMQQKEFHEIFDVAALRIIV------------NSNDECYRALAVVHDAFRPIPGRFKDYI 318

Query: 448 ATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHA 507
             PKPN YQSLHTT+I     S   LE+QIRT EM  IAE GIAAH+             
Sbjct: 319 GLPKPNRYQSLHTTVIGL---SGRPLEIQIRTLEMHRIAEYGIAAHWK-----------Y 364

Query: 508 RPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSRVFV 567
           + +G S  GK    +      + +WL  + EWQ +      ++E+++ I  +L    V+V
Sbjct: 365 KESGGSA-GKFSTEDE-----KFTWLRQLLEWQHDL---KDAKEYLENIKDNLFDEDVYV 415

Query: 568 FTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
           FTP G++  L + +T VD+AY IHTE+GN+   AKVNG +V     L N ++VEI+T
Sbjct: 416 FTPGGDVIALAQRSTPVDFAYRIHTEVGNRCAGAKVNGRIVPLETRLNNGDIVEILT 472


>gi|418884672|ref|ZP_13438855.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1769]
 gi|377711924|gb|EHT36149.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1769]
          Length = 700

 Score =  333 bits (853), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 193/498 (38%), Positives = 292/498 (58%), Gaps = 49/498 (9%)

Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
           E L    SYLS +E E V ++  +A+EAH GQ R++G P+I+HP++VA IL E+ LD  +
Sbjct: 11  EVLHKAKSYLSADEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPT 70

Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
           I AG LHD +EDT   TFE ++E F   V RIV+G TK+ K+ K + K E       +A+
Sbjct: 71  IVAGFLHDVIEDTPY-TFEDVKEMFNEEVARIVDGVTKLKKV-KYRSKEEQ------QAE 122

Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
           + R++F+A+ ++VRVI+VKLADRLHNMRTL  MP  KQ  I+ ETL+++APLA  LG+  
Sbjct: 123 NHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIYAPLAHRLGINT 182

Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
           IK ELE+ +  Y +   Y     R+ +L K+   E E   +  + +I  +  +D M ++ 
Sbjct: 183 IKWELEDTALRYIDNVQYF----RIVNLMKKKRSEREAYIETAIDRIRTE--MDRMNIEG 236

Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
           +I    K  YSIY+ ++K +   +++  +  +R+I+            +    CY +LGL
Sbjct: 237 DINGRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV------------NSINDCYAILGL 284

Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
           VH +W P+P   KDYIA PK N YQSLHTT++     +   LE+QIRT +M  IAE G+A
Sbjct: 285 VHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVVG---PNGDPLEIQIRTFDMHEIAEHGVA 341

Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
           AH++ +                  GK V   +     +++WL   +E  E    +  ++E
Sbjct: 342 AHWAYK-----------------EGKKVSEKDQTYQNKLNWL---KELAEADHTSSDAQE 381

Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
           F++T+  DL   +V+ FTP  ++  LP GA  +D+AY IH+E+GNKM+ AKVNG +V   
Sbjct: 382 FMETLKYDLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPID 441

Query: 612 HVLANAEVVEIITYNVSF 629
           ++L   ++VEI T   S+
Sbjct: 442 YILQTGDIVEIRTSKHSY 459


>gi|418029539|ref|ZP_12668077.1| GTP diphosphokinase [Lactobacillus delbrueckii subsp. bulgaricus
           CNCM I-1632]
 gi|354689845|gb|EHE89818.1| GTP diphosphokinase [Lactobacillus delbrueckii subsp. bulgaricus
           CNCM I-1632]
          Length = 753

 Score =  333 bits (853), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 199/485 (41%), Positives = 280/485 (57%), Gaps = 50/485 (10%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++  +L  V  A   A  AH+GQ R SG+P+I+HP +VA  L  L LD +++AAG LHD
Sbjct: 19  YMTAYQLAFVESAYQFAARAHEGQTRASGQPYIVHPTQVAGTLANLGLDPDTVAAGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
           TVEDT+V T + I+E+FGA V  IV+G TK++K        E  S ++  A++ R+M +A
Sbjct: 79  TVEDTSV-TNDDIKEKFGADVAFIVDGVTKLNKY-------EYKSHKEFLAENHRKMLIA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M +++RVI+VKLADRLHNM TL H+ P KQ  IA ETL ++APLA  LG+  IK +LE++
Sbjct: 131 MAKDLRVILVKLADRLHNMHTLEHLRPDKQRRIAAETLDIYAPLADRLGIGTIKWKLEDM 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           SF Y N E Y K+   +     E E  +++A   L         LD + +K +I    K 
Sbjct: 191 SFHYMNPEAYYKIVYMMDAKRSEREGYIKDAIDYLRGT------LDSLGIKYDISGRPKH 244

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIYK ++    + NE+  +  +R+I+         P       CY VLG VH  W P+
Sbjct: 245 IYSIYKKMVNKHKNFNEIYDLLAVRVIV---------PTVKD---CYAVLGAVHTKWKPM 292

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK NGYQSLHTT+I         LE+QIRTEEM  +AE G+AAH++    
Sbjct: 293 PGRFKDYIAMPKANGYQSLHTTIIG---PGGKPLEIQIRTEEMHKVAEYGVAAHWA---- 345

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
                 + R N +    K         AL IS     RE  E    +  + EF++ +  D
Sbjct: 346 ------YKRGNFQGVDEKE------GGALDIS-----REILELQKDSSDADEFMEAVHSD 388

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           +   +V+VFTP+GE+  LPKG+  +D+AY IHT++G+  + AKVN  LV   + L N +V
Sbjct: 389 IFADKVYVFTPKGEVYELPKGSVTLDFAYAIHTQVGDHAIGAKVNDKLVPLDYKLKNGDV 448

Query: 620 VEIIT 624
           V+I+T
Sbjct: 449 VDILT 453


>gi|419781279|ref|ZP_14307111.1| GTP diphosphokinase [Streptococcus oralis SK100]
 gi|383184671|gb|EIC77185.1| GTP diphosphokinase [Streptococcus oralis SK100]
          Length = 738

 Score =  333 bits (853), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 191/494 (38%), Positives = 293/494 (59%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YL+  ++  V++AL+ A + H GQ R+SGEP+IIHP++VA IL +L+LD  ++A G 
Sbjct: 16  TKEYLTKEDVAFVQKALIYAVDCHSGQFRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT+  T + +E EFG  VR IV+G   V+KLGK++ K    S+++  A++ R+M
Sbjct: 76  LHDVVEDTDA-TLDDLEREFGHDVRIIVDG---VTKLGKVEYK----SLEEQLAENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM+E++RVI+VKL+DRLHNMRTL H+   KQ  I+ ET++++APLA  LG+  +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISSVKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y N  ++ K+   + +  +E E  ++E    ++ K+E  ++     +K +I   
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLE--EYATERNLKGKIYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSIY+ +   +    E+  +  +R I+              Q   Y +LG VH +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHELW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA  K NGYQS+HTT    +Y     +E QIRT+EM  +AE G+AAH++ 
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  + G V                 N+   A+ +SW+  + E Q++      ++EFVD++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMSWIKEMMELQDQ---ADDAKEFVDSV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             + L   ++VFTP G +++LPK +  +D+AY IHT++G K   AKVNG +V  T  L  
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445

Query: 617 AEVVEIITYNVSFS 630
            + VEIIT   SF 
Sbjct: 446 GDQVEIITNPNSFG 459


>gi|417889932|ref|ZP_12534011.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21200]
 gi|418282064|ref|ZP_12894853.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21202]
 gi|418307492|ref|ZP_12919197.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21194]
 gi|418889447|ref|ZP_13443580.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1524]
 gi|341855625|gb|EGS96469.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21200]
 gi|365171614|gb|EHM62439.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21202]
 gi|365245586|gb|EHM86210.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21194]
 gi|377752955|gb|EHT76873.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1524]
          Length = 729

 Score =  333 bits (853), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 193/498 (38%), Positives = 292/498 (58%), Gaps = 49/498 (9%)

Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
           E L    SYLS +E E V ++  +A+EAH GQ R++G P+I+HP++VA IL E+ LD  +
Sbjct: 11  EVLHKAKSYLSADEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPT 70

Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
           I AG LHD +EDT   TFE ++E F   V RIV+G TK+ K+ K + K E       +A+
Sbjct: 71  IVAGFLHDVIEDTPY-TFEDVKEMFNEEVARIVDGVTKLKKV-KYRSKEEQ------QAE 122

Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
           + R++F+A+ ++VRVI+VKLADRLHNMRTL  MP  KQ  I+ ETL+++APLA  LG+  
Sbjct: 123 NHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIYAPLAHRLGINT 182

Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
           IK ELE+ +  Y +   Y     R+ +L K+   E E   +  + +I  +  +D M ++ 
Sbjct: 183 IKWELEDTALRYIDNVQYF----RIVNLMKKKRSEREAYIETAIDRIRTE--MDRMNIEG 236

Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
           +I    K  YSIY+ ++K +   +++  +  +R+I+            +    CY +LGL
Sbjct: 237 DINGRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV------------NSINDCYAILGL 284

Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
           VH +W P+P   KDYIA PK N YQSLHTT++     +   LE+QIRT +M  IAE G+A
Sbjct: 285 VHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVVG---PNGDPLEIQIRTFDMHEIAEHGVA 341

Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
           AH++ +                  GK V   +     +++WL   +E  E    +  ++E
Sbjct: 342 AHWAYK-----------------EGKKVSEKDQTYQNKLNWL---KELAEADHTSSDAQE 381

Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
           F++T+  DL   +V+ FTP  ++  LP GA  +D+AY IH+E+GNKM+ AKVNG +V   
Sbjct: 382 FMETLKYDLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPID 441

Query: 612 HVLANAEVVEIITYNVSF 629
           ++L   ++VEI T   S+
Sbjct: 442 YILQTGDIVEIRTSKHSY 459


>gi|427392523|ref|ZP_18886528.1| RelA/SpoT family protein [Alloiococcus otitis ATCC 51267]
 gi|425731484|gb|EKU94302.1| RelA/SpoT family protein [Alloiococcus otitis ATCC 51267]
          Length = 736

 Score =  333 bits (853), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 186/492 (37%), Positives = 291/492 (59%), Gaps = 49/492 (9%)

Query: 138 ISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLL 197
           ++Y++ + +  V+RA  +A EAH GQ R+S E +I HPV+VA IL E+++D  ++A G L
Sbjct: 17  LTYMTSDHVAFVKRAYDVAEEAHRGQMRKSQEEYITHPVQVAAILAEIKMDPVTVATGFL 76

Query: 198 HDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMF 257
           HD +EDT + +++ I E F   V  +V+G   VSKLGK K K    S ++ +A++ R+M 
Sbjct: 77  HDVIEDT-LYSYDDIAEMFNPKVADLVDG---VSKLGKFKFK----SKEEHQAENHRKML 128

Query: 258 LAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELE 317
           LAM ++VRV++VKLADRLHNMRTL +  P KQ  IA ETL+++APLA  LG+ +IK ELE
Sbjct: 129 LAMAKDVRVVLVKLADRLHNMRTLKYHRPEKQREIARETLEIYAPLADRLGISRIKWELE 188

Query: 318 NLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVC 377
           + +  Y N + Y ++   +    ++ E+ +E A +++ + ++D      + ++  I    
Sbjct: 189 DTALRYINPQQYYRIVHLMKSRREDRERYIENAQELIQESVDD------LDIEANITGRP 242

Query: 378 KEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWT 437
           K  YSIY+ +   +    E+  +  +R+I+         P       CY VLG +H  W 
Sbjct: 243 KHIYSIYRKMKNQKKQFGEIYDLLAIRVIV---------PSIKD---CYAVLGAIHTRWK 290

Query: 438 PIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGR 497
           P+P   KDYIA PK N YQSLHTT+   L      LEVQIRT++M  +AE G+AAH++ +
Sbjct: 291 PMPGRFKDYIAMPKANMYQSLHTTV---LGPDATPLEVQIRTQQMHEVAEYGVAAHWAYK 347

Query: 498 VFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTIT 557
                             GKT  +   +   ++SW   I E Q E   +  + +F+D+I 
Sbjct: 348 -----------------EGKTQKVKEDSDNKQLSWFRDIIELQTE---SNNASDFMDSIK 387

Query: 558 RDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANA 617
            D+   +V+VF+P+G++  LPK ++ +D+AY +HTE+GNK   AKVNG +V   + L N 
Sbjct: 388 EDIFQDKVYVFSPKGDVMELPKNSSTLDFAYHVHTEVGNKSTGAKVNGKIVPLNYKLKNG 447

Query: 618 EVVEIITYNVSF 629
           ++VE++T + SF
Sbjct: 448 DIVEMLTSSNSF 459


>gi|406981761|gb|EKE03162.1| hypothetical protein ACD_20C00238G0002 [uncultured bacterium]
          Length = 718

 Score =  333 bits (853), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 194/480 (40%), Positives = 289/480 (60%), Gaps = 49/480 (10%)

Query: 145 ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDT 204
           E++ +R A   A   H GQ R S EP+I+HPVEVA IL  L+ D ++I A LLHD +EDT
Sbjct: 23  EIKKIRSAYDFAASWHKGQYRISEEPYIVHPVEVANILANLQADTDTICAALLHDILEDT 82

Query: 205 NVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEV 264
           +    E+I+E FG  V  +V G TK+SK          +S ++ +A++ R+MFLAM E+V
Sbjct: 83  DTKP-EQIKELFGEDVLNLVNGVTKLSKYS-------FNSKEERQAENFRKMFLAMAEDV 134

Query: 265 RVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYT 324
           RVI +KLADRLHNMRTL++M PHKQ  IA ET+++FAPLA  LGM +I++ELE+LS  Y 
Sbjct: 135 RVIFLKLADRLHNMRTLNYMAPHKQKEIAQETVEIFAPLANRLGMGKIRAELEDLSLRYL 194

Query: 325 NAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIY 384
           N E Y +    +A L  + + E +   + ++ KI  +  L  M ++  I    K   SIY
Sbjct: 195 NPEKYFE----IAQLVAQSKAERDLTVQAIIDKI--NSSLKNMNIEAVITGRAKNYNSIY 248

Query: 385 KAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMK 444
             + + + S  ++  I   RI++              ++ CY VLG++H  + PIP   K
Sbjct: 249 NKMTRQQKSYQDLYDITAARIVV------------DNEKECYEVLGVIHSAFKPIPGRFK 296

Query: 445 DYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLV 504
           DYIA PK N Y+SLHT++I    +    LEVQIRT EM  +AE GIAAH+          
Sbjct: 297 DYIAMPKSNLYRSLHTSVIGPRGKP---LEVQIRTHEMHDVAEFGIAAHW---------- 343

Query: 505 GHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSR 564
              + +G S R      +++++ ++ SWL  + E+Q++      ++E+V+++  DL   +
Sbjct: 344 -RYKESGGSTR------SSSDVDMKFSWLRKLIEFQQDI---KDAQEYVNSVKLDLFSDQ 393

Query: 565 VFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
           VFVF+P+G++ +LP GAT +D+AY IHTE+G+K V A VNG +VS    L N +++EI+T
Sbjct: 394 VFVFSPKGDVIDLPSGATPIDFAYRIHTEVGHKCVGALVNGRIVSLDSKLKNGDIIEILT 453


>gi|258424059|ref|ZP_05686941.1| GTP pyrophosphokinase [Staphylococcus aureus A9635]
 gi|257845680|gb|EEV69712.1| GTP pyrophosphokinase [Staphylococcus aureus A9635]
          Length = 736

 Score =  333 bits (853), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 193/498 (38%), Positives = 292/498 (58%), Gaps = 49/498 (9%)

Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
           E L    SYLS +E E V ++  +A+EAH GQ R++G P+I+HP++VA IL E+ LD  +
Sbjct: 18  EVLHKAKSYLSADEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPT 77

Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
           I AG LHD +EDT   TFE ++E F   V RIV+G TK+ K+ K + K E       +A+
Sbjct: 78  IVAGFLHDVIEDTPY-TFEDVKEMFNEEVARIVDGVTKLKKV-KYRSKEEQ------QAE 129

Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
           + R++F+A+ ++VRVI+VKLADRLHNMRTL  MP  KQ  I+ ETL+++APLA  LG+  
Sbjct: 130 NHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIYAPLAHRLGINT 189

Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
           IK ELE+ +  Y +   Y     R+ +L K+   E E   +  + +I  +  +D M ++ 
Sbjct: 190 IKWELEDTALRYIDNVQYF----RIVNLMKKKRSEREAYIETAIDRIRTE--MDRMNIEG 243

Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
           +I    K  YSIY+ ++K +   +++  +  +R+I+            +    CY +LGL
Sbjct: 244 DINGRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV------------NSINDCYAILGL 291

Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
           VH +W P+P   KDYIA PK N YQSLHTT++     +   LE+QIRT +M  IAE G+A
Sbjct: 292 VHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVVG---PNGDPLEIQIRTFDMHEIAEHGVA 348

Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
           AH++ +                  GK V   +     +++WL   +E  E    +  ++E
Sbjct: 349 AHWAYK-----------------EGKKVSEKDQTYQNKLNWL---KELAEADHTSSDAQE 388

Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
           F++T+  DL   +V+ FTP  ++  LP GA  +D+AY IH+E+GNKM+ AKVNG +V   
Sbjct: 389 FMETLKYDLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPID 448

Query: 612 HVLANAEVVEIITYNVSF 629
           ++L   ++VEI T   S+
Sbjct: 449 YILQTGDIVEIRTSKHSY 466


>gi|270293217|ref|ZP_06199428.1| GTP diphosphokinase [Streptococcus sp. M143]
 gi|270279196|gb|EFA25042.1| GTP diphosphokinase [Streptococcus sp. M143]
          Length = 738

 Score =  333 bits (853), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 190/494 (38%), Positives = 293/494 (59%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YLS  ++  V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD  ++A G 
Sbjct: 16  TQKYLSKEDVAFVHKALVYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT+  T + +E+EFG  VR IV+G   V+KLGK++ K    S+++  A++ R+M
Sbjct: 76  LHDVVEDTDA-TLDDLEQEFGHEVRIIVDG---VTKLGKVEYK----SLEEQLAENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM+E++RVI+VKL+DRLHNMRTL H+   KQ  I+ ET++++APLA  LG+  +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISSVKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y N  ++ K+   + +  +E E  ++E    ++ K+E  ++     +K +I   
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLE--EYTSERNLKGKIYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSIY+ +   +    E+  +  +R I+              Q   Y +LG VH +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHELW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA  K NGYQS+HTT    +Y     +E QIRT+EM  +AE G+AAH++ 
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  + G V                 N+   A+ ++W+  + E Q++      ++EFV+++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVESV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             + L   ++VFTP G +++LPK +  +D+AY IHT++G K   AKVNG +V  T  L  
Sbjct: 386 KEEYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445

Query: 617 AEVVEIITYNVSFS 630
            + VEI+T   SF 
Sbjct: 446 GDQVEIVTNPNSFG 459


>gi|57650515|ref|YP_186528.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus COL]
 gi|88195445|ref|YP_500249.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|221141097|ref|ZP_03565590.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus str.
           JKD6009]
 gi|284024690|ref|ZP_06379088.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus 132]
 gi|384550458|ref|YP_005739710.1| GTP pyrophosphokinase, (p)ppGpp synthetase I, RelA [Staphylococcus
           aureus subsp. aureus JKD6159]
 gi|384862233|ref|YP_005744953.1| GTP pyrophosphokinase, (p)ppGpp synthetase I, RelA [Staphylococcus
           aureus subsp. aureus str. JKD6008]
 gi|384870173|ref|YP_005752887.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus T0131]
 gi|385781917|ref|YP_005758088.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus
           11819-97]
 gi|387143236|ref|YP_005731629.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus TW20]
 gi|387602972|ref|YP_005734493.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp
           synthetase I) ((P)ppGpp synthetase) [Staphylococcus
           aureus subsp. aureus ST398]
 gi|387780722|ref|YP_005755520.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus LGA251]
 gi|404478985|ref|YP_006710415.1| GTP pyrophosphokinase [Staphylococcus aureus 08BA02176]
 gi|415682436|ref|ZP_11447752.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CGS00]
 gi|415686173|ref|ZP_11450310.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CGS01]
 gi|416839675|ref|ZP_11903056.1| GTP pyrophosphokinase [Staphylococcus aureus O11]
 gi|416846584|ref|ZP_11906633.1| GTP pyrophosphokinase [Staphylococcus aureus O46]
 gi|417649291|ref|ZP_12299095.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21189]
 gi|417653377|ref|ZP_12303108.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21193]
 gi|417797567|ref|ZP_12444763.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21305]
 gi|417799958|ref|ZP_12447090.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21310]
 gi|417887946|ref|ZP_12532065.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21195]
 gi|417896907|ref|ZP_12540850.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21235]
 gi|417901229|ref|ZP_12545106.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21266]
 gi|417903131|ref|ZP_12546986.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21269]
 gi|418277930|ref|ZP_12892150.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21178]
 gi|418285658|ref|ZP_12898326.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21209]
 gi|418309946|ref|ZP_12921496.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21331]
 gi|418318525|ref|ZP_12929927.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21232]
 gi|418321376|ref|ZP_12932722.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus VCU006]
 gi|418560386|ref|ZP_13124901.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21252]
 gi|418564712|ref|ZP_13129133.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21264]
 gi|418571915|ref|ZP_13136135.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21283]
 gi|418574398|ref|ZP_13138567.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21333]
 gi|418579557|ref|ZP_13143652.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1114]
 gi|418582560|ref|ZP_13146638.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1605]
 gi|418597458|ref|ZP_13160986.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21342]
 gi|418597992|ref|ZP_13161506.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21343]
 gi|418601540|ref|ZP_13164966.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21345]
 gi|418641811|ref|ZP_13204016.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-24]
 gi|418644086|ref|ZP_13206237.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-55]
 gi|418648467|ref|ZP_13210511.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-88]
 gi|418650678|ref|ZP_13212696.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-91]
 gi|418654995|ref|ZP_13216878.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-105]
 gi|418660671|ref|ZP_13222290.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-111]
 gi|418872843|ref|ZP_13427169.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-125]
 gi|418875573|ref|ZP_13429829.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIGC93]
 gi|418892363|ref|ZP_13446476.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1176]
 gi|418898269|ref|ZP_13452339.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus
           CIGC341D]
 gi|418901138|ref|ZP_13455194.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1214]
 gi|418903939|ref|ZP_13457980.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1770]
 gi|418906577|ref|ZP_13460603.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus
           CIGC345D]
 gi|418909485|ref|ZP_13463480.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG149]
 gi|418917531|ref|ZP_13471490.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1267]
 gi|418923315|ref|ZP_13477231.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1233]
 gi|418925891|ref|ZP_13479793.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG2018]
 gi|418928982|ref|ZP_13482868.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1612]
 gi|418946741|ref|ZP_13499153.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-157]
 gi|418953538|ref|ZP_13505527.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-189]
 gi|418982639|ref|ZP_13530347.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1242]
 gi|418986307|ref|ZP_13533991.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1500]
 gi|419773205|ref|ZP_14299216.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus CO-23]
 gi|421148486|ref|ZP_15608146.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus str.
           Newbould 305]
 gi|424785467|ref|ZP_18212270.1| GTP pyrophosphokinase [Staphylococcus aureus CN79]
 gi|440707473|ref|ZP_20888172.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21282]
 gi|440735083|ref|ZP_20914694.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus DSM
           20231]
 gi|443639864|ref|ZP_21123864.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21196]
 gi|57284701|gb|AAW36795.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus COL]
 gi|87203003|gb|ABD30813.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|269941119|emb|CBI49505.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus TW20]
 gi|283470910|emb|CAQ50121.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp
           synthetase I) ((P)ppGpp synthetase) [Staphylococcus
           aureus subsp. aureus ST398]
 gi|302333307|gb|ADL23500.1| GTP pyrophosphokinase, (p)ppGpp synthetase I, RelA [Staphylococcus
           aureus subsp. aureus JKD6159]
 gi|302751462|gb|ADL65639.1| GTP pyrophosphokinase, (p)ppGpp synthetase I, RelA [Staphylococcus
           aureus subsp. aureus str. JKD6008]
 gi|315195536|gb|EFU25923.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CGS00]
 gi|315198666|gb|EFU28994.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CGS01]
 gi|323440813|gb|EGA98522.1| GTP pyrophosphokinase [Staphylococcus aureus O11]
 gi|323442838|gb|EGB00463.1| GTP pyrophosphokinase [Staphylococcus aureus O46]
 gi|329314308|gb|AEB88721.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus T0131]
 gi|329728397|gb|EGG64834.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21189]
 gi|329733068|gb|EGG69405.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21193]
 gi|334267059|gb|EGL85529.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21305]
 gi|334272490|gb|EGL90855.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21310]
 gi|341840173|gb|EGS81693.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21235]
 gi|341846388|gb|EGS87585.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21266]
 gi|341850305|gb|EGS91429.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21269]
 gi|341856975|gb|EGS97802.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21195]
 gi|344177824|emb|CCC88303.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus LGA251]
 gi|364522906|gb|AEW65656.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus
           11819-97]
 gi|365169468|gb|EHM60716.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21209]
 gi|365172889|gb|EHM63551.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21178]
 gi|365225608|gb|EHM66851.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus VCU006]
 gi|365237403|gb|EHM78249.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21331]
 gi|365242988|gb|EHM83683.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21232]
 gi|371971946|gb|EHO89337.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21252]
 gi|371975849|gb|EHO93141.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21264]
 gi|371978407|gb|EHO95656.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21283]
 gi|371979125|gb|EHO96360.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21333]
 gi|374394585|gb|EHQ65867.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21342]
 gi|374398254|gb|EHQ69438.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21345]
 gi|374400300|gb|EHQ71418.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21343]
 gi|375018266|gb|EHS11846.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-24]
 gi|375026380|gb|EHS19763.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-88]
 gi|375026607|gb|EHS19987.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-55]
 gi|375027964|gb|EHS21322.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-91]
 gi|375031476|gb|EHS24756.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-111]
 gi|375038457|gb|EHS31437.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-105]
 gi|375366783|gb|EHS70764.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-125]
 gi|375374758|gb|EHS78381.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-189]
 gi|375377521|gb|EHS80983.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-157]
 gi|377697584|gb|EHT21939.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1114]
 gi|377702535|gb|EHT26857.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1214]
 gi|377703685|gb|EHT27998.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1500]
 gi|377704920|gb|EHT29229.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1242]
 gi|377710970|gb|EHT35208.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1605]
 gi|377730657|gb|EHT54724.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1176]
 gi|377735274|gb|EHT59310.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1233]
 gi|377738894|gb|EHT62903.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1612]
 gi|377742954|gb|EHT66939.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1770]
 gi|377744960|gb|EHT68937.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG2018]
 gi|377750705|gb|EHT74643.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1267]
 gi|377751862|gb|EHT75789.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG149]
 gi|377761304|gb|EHT85180.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus
           CIGC341D]
 gi|377763482|gb|EHT87338.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus
           CIGC345D]
 gi|377769645|gb|EHT93413.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIGC93]
 gi|383973029|gb|EID89050.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus CO-23]
 gi|394331629|gb|EJE57712.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus str.
           Newbould 305]
 gi|404440474|gb|AFR73667.1| GTP pyrophosphokinase [Staphylococcus aureus 08BA02176]
 gi|421956877|gb|EKU09206.1| GTP pyrophosphokinase [Staphylococcus aureus CN79]
 gi|436431178|gb|ELP28532.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus DSM
           20231]
 gi|436506229|gb|ELP42068.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21282]
 gi|443406139|gb|ELS64723.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21196]
          Length = 729

 Score =  333 bits (853), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 193/498 (38%), Positives = 292/498 (58%), Gaps = 49/498 (9%)

Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
           E L    SYLS +E E V ++  +A+EAH GQ R++G P+I+HP++VA IL E+ LD  +
Sbjct: 11  EVLHKAKSYLSADEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPT 70

Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
           I AG LHD +EDT   TFE ++E F   V RIV+G TK+ K+ K + K E       +A+
Sbjct: 71  IVAGFLHDVIEDTPY-TFEDVKEMFNEEVARIVDGVTKLKKV-KYRSKEEQ------QAE 122

Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
           + R++F+A+ ++VRVI+VKLADRLHNMRTL  MP  KQ  I+ ETL+++APLA  LG+  
Sbjct: 123 NHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIYAPLAHRLGINT 182

Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
           IK ELE+ +  Y +   Y     R+ +L K+   E E   +  + +I  +  +D M ++ 
Sbjct: 183 IKWELEDTALRYIDNVQYF----RIVNLMKKKRSEREAYIETAIDRIRTE--MDRMNIEG 236

Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
           +I    K  YSIY+ ++K +   +++  +  +R+I+            +    CY +LGL
Sbjct: 237 DINGRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV------------NSINDCYAILGL 284

Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
           VH +W P+P   KDYIA PK N YQSLHTT++     +   LE+QIRT +M  IAE G+A
Sbjct: 285 VHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVVG---PNGDPLEIQIRTFDMHEIAEHGVA 341

Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
           AH++ +                  GK V   +     +++WL   +E  E    +  ++E
Sbjct: 342 AHWAYK-----------------EGKKVSEKDQTYQNKLNWL---KELAEADHTSSDAQE 381

Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
           F++T+  DL   +V+ FTP  ++  LP GA  +D+AY IH+E+GNKM+ AKVNG +V   
Sbjct: 382 FMETLKYDLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPID 441

Query: 612 HVLANAEVVEIITYNVSF 629
           ++L   ++VEI T   S+
Sbjct: 442 YILQTGDIVEIRTSKHSY 459


>gi|418912249|ref|ZP_13466230.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG547]
 gi|377722506|gb|EHT46632.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG547]
          Length = 738

 Score =  333 bits (853), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 193/498 (38%), Positives = 292/498 (58%), Gaps = 49/498 (9%)

Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
           E L    SYLS +E E V ++  +A+EAH GQ R++G P+I+HP++VA IL E+ LD  +
Sbjct: 11  EVLHKAKSYLSADEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPT 70

Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
           I AG LHD +EDT   TFE ++E F   V RIV+G TK+ K+ K + K E       +A+
Sbjct: 71  IVAGFLHDVIEDTPY-TFEDVKEMFNEEVARIVDGVTKLKKV-KYRSKEEQ------QAE 122

Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
           + R++F+A+ ++VRVI+VKLADRLHNMRTL  MP  KQ  I+ ETL+++APLA  LG+  
Sbjct: 123 NHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIYAPLAHRLGINT 182

Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
           IK ELE+ +  Y +   Y     R+ +L K+   E E   +  + +I  +  +D M ++ 
Sbjct: 183 IKWELEDTALRYIDNVQYF----RIVNLMKKKRSEREAYIETAIDRIRTE--MDRMNIEG 236

Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
           +I    K  YSIY+ ++K +   +++  +  +R+I+            +    CY +LGL
Sbjct: 237 DINGRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV------------NSINDCYAILGL 284

Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
           VH +W P+P   KDYIA PK N YQSLHTT++     +   LE+QIRT +M  IAE G+A
Sbjct: 285 VHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVVG---PNGDPLEIQIRTFDMHEIAEHGVA 341

Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
           AH++ +                  GK V   +     +++WL   +E  E    +  ++E
Sbjct: 342 AHWAYK-----------------EGKKVSEKDQTYQNKLNWL---KELAEADHTSSDAQE 381

Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
           F++T+  DL   +V+ FTP  ++  LP GA  +D+AY IH+E+GNKM+ AKVNG +V   
Sbjct: 382 FMETLKYDLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPID 441

Query: 612 HVLANAEVVEIITYNVSF 629
           ++L   ++VEI T   S+
Sbjct: 442 YILQTGDIVEIRTSKHSY 459


>gi|379014840|ref|YP_005291076.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus VC40]
 gi|374363537|gb|AEZ37642.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus VC40]
          Length = 729

 Score =  333 bits (853), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 193/498 (38%), Positives = 292/498 (58%), Gaps = 49/498 (9%)

Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
           E L    SYLS +E E V ++  +A+EAH GQ R++G P+I+HP++VA IL E+ LD  +
Sbjct: 11  EVLHKAKSYLSADEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPT 70

Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
           I AG LHD +EDT   TFE ++E F   V RIV+G TK+ K+ K + K E       +A+
Sbjct: 71  IVAGFLHDVIEDTPY-TFEDVKEMFNEEVARIVDGVTKLKKV-KYRSKEEQ------QAE 122

Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
           + R++F+A+ ++VRVI+VKLADRLHNMRTL  MP  KQ  I+ ETL+++APLA  LG+  
Sbjct: 123 NHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIYAPLAHRLGINT 182

Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
           IK ELE+ +  Y +   Y     R+ +L K+   E E   +  + +I  +  +D M ++ 
Sbjct: 183 IKWELEDTALRYIDNVQYF----RIVNLMKKKRSEREAYIETAIDRIRTE--MDRMNIEG 236

Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
           +I    K  YSIY+ ++K +   +++  +  +R+I+            +    CY +LGL
Sbjct: 237 DINGRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV------------NSINDCYAILGL 284

Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
           VH +W P+P   KDYIA PK N YQSLHTT++     +   LE+QIRT +M  IAE G+A
Sbjct: 285 VHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVVG---PNGDPLEIQIRTFDMHEIAEHGVA 341

Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
           AH++ +                  GK V   +     +++WL   +E  E    +  ++E
Sbjct: 342 AHWAYK-----------------EGKKVSEKDQTYQNKLNWL---KELAEADHTSSDAQE 381

Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
           F++T+  DL   +V+ FTP  ++  LP GA  +D+AY IH+E+GNKM+ AKVNG +V   
Sbjct: 382 FMETLKYDLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPID 441

Query: 612 HVLANAEVVEIITYNVSF 629
           ++L   ++VEI T   S+
Sbjct: 442 YILQTGDIVEIRTSKHSY 459


>gi|417850258|ref|ZP_12496169.1| GTP diphosphokinase [Streptococcus mitis SK1080]
 gi|339452940|gb|EGP65558.1| GTP diphosphokinase [Streptococcus mitis SK1080]
          Length = 740

 Score =  333 bits (853), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 191/494 (38%), Positives = 289/494 (58%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YL+  ++  V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD  ++A G 
Sbjct: 16  TKEYLTEEDVHFVHKALIYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT+  T + +E EFG  VR IV+G   V+KLGK+K K+    +    A++ R+M
Sbjct: 76  LHDVVEDTDA-TLDDLEREFGPDVRVIVDG---VTKLGKVKYKSHEEQL----AENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM+E++RVI+VKL+DRLHNMRTL H+   KQ  I+ ET++++APLA  LG+  +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISKETMEIYAPLAHRLGISSVKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y N  ++ K+   + +  +E E  ++E    ++ K+ED  +     +K +I   
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLED--YTTDRHLKGKIYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSI++ +   R    E+  +  +R I+              Q   Y +LG VH +W
Sbjct: 242 PKHIYSIFRKMQDKRKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHELW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA  K NGYQS+HTT    +Y     +E QIRT+ M  +AE G+AAH++ 
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKAMHEVAEYGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  V G V                 N+   A+ ++W+  + E Q++      ++EFVD++
Sbjct: 346 KKGVKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDSV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             + L   ++VFTP G +++LPK +  +D+AY IHT++G K   AKVNG +V  T  L  
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445

Query: 617 AEVVEIITYNVSFS 630
            + VEI+T   SF 
Sbjct: 446 GDQVEIVTNPNSFG 459


>gi|114566344|ref|YP_753498.1| GTP diphosphokinase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|114337279|gb|ABI68127.1| GTP diphosphokinase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
          Length = 734

 Score =  333 bits (853), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 195/485 (40%), Positives = 286/485 (58%), Gaps = 67/485 (13%)

Query: 148 LVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVV 207
           L+ +A  +A +AH  QKR SGEP+IIHP EVA IL ++E+D  +I A LLHD +EDT V 
Sbjct: 21  LIEKAFRVAEQAHQEQKRISGEPYIIHPCEVALILADIEMDTPTICAALLHDVIEDTPV- 79

Query: 208 TFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVI 267
           ++  I +EFG  +  +V+G TK++++       +  S +D +A++LR+MF+AM  ++RVI
Sbjct: 80  SYLDILKEFGEEIALLVDGVTKLTRI-------DFKSREDAQAENLRRMFIAMARDIRVI 132

Query: 268 IVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAE 327
           I+KLADRLHNMRTLS+    KQ  IA ET+++FAPLA  LG+++ K ELE+L+F Y   E
Sbjct: 133 IIKLADRLHNMRTLSYHAEAKQKVIARETMEIFAPLAHRLGIFRFKWELEDLAFYYMEPE 192

Query: 328 DYAKVKRRVADLYKEHE---KELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIY 384
            Y +V +R+    +E E    +L E  K+ + +I+ D          +I+   K  +SIY
Sbjct: 193 MYYEVAKRLKQKRRERENYVNDLVEQIKVGLHQIDID---------ADIKGRPKNIFSIY 243

Query: 385 KAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMK 444
           K ++K    ++E+     +R++++              + CY VLG++H +W P+P   K
Sbjct: 244 KKMIKQGKDVDEIYDKIAIRVLVE------------DVRDCYGVLGIIHTMWKPLPGRFK 291

Query: 445 DYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           DYIATPK N YQSLHTTLI     PF        EVQIRT EM   AE GIAAH+  +  
Sbjct: 292 DYIATPKANMYQSLHTTLIGRGGEPF--------EVQIRTAEMHRTAEYGIAAHWRYK-- 341

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
                      G +PR +           ++SWL  I EWQ+E      + EF++++  D
Sbjct: 342 ----------EGYNPRER-------KFDEKLSWLRQILEWQQEV---KDTSEFMESLKID 381

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           L    VFVF+P+G +  L KGA  VD+AY +HTE+G++   A+VNG +V     L N ++
Sbjct: 382 LFDDTVFVFSPKGAVFELTKGACPVDFAYRVHTEVGHRCTGARVNGRIVPLDLPLENGDI 441

Query: 620 VEIIT 624
           VEI+T
Sbjct: 442 VEILT 446


>gi|82523943|emb|CAI78665.1| guanosine polyphosphate pyrophosphohydrolases/synthetases
           [uncultured delta proteobacterium]
          Length = 713

 Score =  333 bits (853), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 193/496 (38%), Positives = 286/496 (57%), Gaps = 50/496 (10%)

Query: 129 RLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
           R+ + L    SYL+P +LE++++A + +   H GQ R SGEP++ HP+EVA IL ++++D
Sbjct: 3   RINDILDKAQSYLTPEDLEMIKKAYVYSAAVHQGQVRLSGEPYLTHPMEVAGILADMKMD 62

Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
             +I +GLLHDTVEDT + T E++EEEFG  V  +V G TK+S +          S ++ 
Sbjct: 63  AATIISGLLHDTVEDT-LSTVEQVEEEFGKDVAFLVSGLTKLSLIS-------FRSQEER 114

Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
           +A++ R+M LAM+ ++R+++V+LADR+HNMRTL + P  K+  IA ET+ V+APLA  LG
Sbjct: 115 QAENFRKMILAMSSDIRILLVRLADRIHNMRTLQYQPLEKRVYIARETIDVYAPLANRLG 174

Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
           +  IK+ELE+LSF Y + E Y ++  RV    +   +  EE  K++ ++++         
Sbjct: 175 INWIKTELEDLSFQYLSPEAYNELSMRVVQSNESRHRYTEEVKKLISEELKK------FK 228

Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
           ++ E+    K  Y IYK + +   + +EV  +   R+I+      G          CY  
Sbjct: 229 IEGEVEGRAKHLYGIYKKMHEQHLNFDEVYDLIAFRVILDSDQEKG----------CYET 278

Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAER 488
           L +VH +W P+P   KDYIA PK N YQSLHTT+I    E   RLE+QIRT  M   AE+
Sbjct: 279 LSVVHSLWKPVPGRFKDYIAMPKANNYQSLHTTVIGPYGE---RLEIQIRTRAMHEWAEK 335

Query: 489 GIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMT 548
           GIAAH+                 R   G+       N   +I  L  I E Q+E      
Sbjct: 336 GIAAHW-----------------RYKEGRAYKDEEEN---QIKKLREILEIQQEI---KN 372

Query: 549 SREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLV 608
            +EF+  +   L    V+VFTP G++K+ PKGAT VD+AY IHT++GN+ + AKVN N+V
Sbjct: 373 PKEFMSDLRLALFPEEVYVFTPHGDVKSFPKGATPVDFAYSIHTDVGNQCIGAKVNRNIV 432

Query: 609 SPTHVLANAEVVEIIT 624
              + L N + +EIIT
Sbjct: 433 PLKYKLQNGDRLEIIT 448


>gi|406962538|gb|EKD88859.1| hypothetical protein ACD_34C00295G0001, partial [uncultured
           bacterium]
          Length = 691

 Score =  333 bits (853), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 196/502 (39%), Positives = 282/502 (56%), Gaps = 70/502 (13%)

Query: 147 ELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNV 206
           E++  A   A  AH+GQKR SGEP+I H V VA IL E+++    ++A LLHDTVEDT +
Sbjct: 28  EMITHAYKYAETAHEGQKRASGEPYITHCVAVAIILAEMQVQPIVVSAALLHDTVEDTKI 87

Query: 207 VTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS------VQDVKADD-------- 252
            T + I +EFG  +  +V+G TK++ L ++   +++ +       +D +ADD        
Sbjct: 88  -TLDDIRKEFGTEIGGLVDGVTKLTHLPRVSRADQHDAEIFEQITKDSEADDSLLDSQLA 146

Query: 253 -----------LRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFA 301
                      LR+ FLAM E++RVI++KLADRLHNMRTL  MP  K+  IA ETL +FA
Sbjct: 147 RDRRRDLANETLRKTFLAMGEDIRVILIKLADRLHNMRTLGFMPEKKRKRIAQETLDIFA 206

Query: 302 PLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDD 361
           PLA  LG++Q+K ELE+L F YTN E Y ++ + +++   E +++++  +  L K + D 
Sbjct: 207 PLANRLGIWQLKWELEDLGFRYTNPEKYKEIAQNLSETRLERDRQMQAISDKLEKLLSD- 265

Query: 362 QFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSP 421
                  VK +I +  K  +SIYK + +       V  +  +R+I+   P          
Sbjct: 266 -----AGVKVDISARSKHIFSIYKKMQEKNKPFELVRDLRGVRLIVPDIPS--------- 311

Query: 422 QQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEE 481
              CY  LGL+H  W PIP    DYIA PK N YQSLHT +   LY+    LEVQIRT E
Sbjct: 312 ---CYSALGLIHTNWRPIPNEFDDYIAGPKDNFYQSLHTAI---LYDDGKPLEVQIRTPE 365

Query: 482 MDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQE 541
           MD  AE GIAAH+                    + K    ++     RI+WL  + EW++
Sbjct: 366 MDENAEFGIAAHW--------------------KYKEKGPHDEKYEQRINWLKKLMEWRQ 405

Query: 542 EFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAA 601
           +      + EFVD +  D+   RV+VFTPRG+I +LP G+T +D+AY +HTEIGN+   A
Sbjct: 406 DV---EDANEFVDGMKTDVFQDRVYVFTPRGDIIDLPSGSTPIDFAYHVHTEIGNRCRGA 462

Query: 602 KVNGNLVSPTHVLANAEVVEII 623
           K+NG LV+  + L   + VEI+
Sbjct: 463 KINGKLVNLEYTLKTGDQVEIL 484


>gi|49483878|ref|YP_041102.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus MRSA252]
 gi|87162370|ref|YP_494285.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|151221748|ref|YP_001332570.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|161509859|ref|YP_001575518.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|257425758|ref|ZP_05602182.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus 55/2053]
 gi|257428418|ref|ZP_05604816.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus 65-1322]
 gi|257431056|ref|ZP_05607435.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus 68-397]
 gi|257433742|ref|ZP_05610100.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus E1410]
 gi|257436657|ref|ZP_05612701.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus M876]
 gi|258450540|ref|ZP_05698602.1| GTP pyrophosphokinase [Staphylococcus aureus A5948]
 gi|282904214|ref|ZP_06312102.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus C160]
 gi|282906040|ref|ZP_06313895.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus Btn1260]
 gi|282908953|ref|ZP_06316771.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282911270|ref|ZP_06319072.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282914439|ref|ZP_06322225.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus M899]
 gi|282916902|ref|ZP_06324660.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus D139]
 gi|282919408|ref|ZP_06327143.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus C427]
 gi|282920183|ref|ZP_06327908.1| GTP pyrophosphokinase [Staphylococcus aureus A9765]
 gi|282924732|ref|ZP_06332400.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus C101]
 gi|283770708|ref|ZP_06343600.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus H19]
 gi|283958394|ref|ZP_06375845.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|293503512|ref|ZP_06667359.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus 58-424]
 gi|293510530|ref|ZP_06669236.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus M809]
 gi|293531071|ref|ZP_06671753.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus M1015]
 gi|294848663|ref|ZP_06789409.1| GTP pyrophosphokinase [Staphylococcus aureus A9754]
 gi|297590823|ref|ZP_06949461.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus MN8]
 gi|384547864|ref|YP_005737117.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus ED133]
 gi|384867394|ref|YP_005747590.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus TCH60]
 gi|386729333|ref|YP_006195716.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus 71193]
 gi|386831240|ref|YP_006237894.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus HO 5096
           0412]
 gi|418978356|ref|ZP_13526157.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus DR10]
 gi|422742582|ref|ZP_16796585.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus MRSA177]
 gi|422746071|ref|ZP_16800004.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus MRSA131]
 gi|59798275|sp|Q6GG70.1|RELA_STAAR RecName: Full=GTP pyrophosphokinase; AltName: Full=(p)ppGpp
           synthase; AltName: Full=ATP:GTP
           3'-pyrophosphotransferase; AltName: Full=ppGpp synthase
           I
 gi|49242007|emb|CAG40705.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus MRSA252]
 gi|87128344|gb|ABD22858.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|150374548|dbj|BAF67808.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|160368668|gb|ABX29639.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|257271452|gb|EEV03598.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus 55/2053]
 gi|257275259|gb|EEV06746.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus 65-1322]
 gi|257278259|gb|EEV08901.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus 68-397]
 gi|257281835|gb|EEV11972.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus E1410]
 gi|257284008|gb|EEV14131.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus M876]
 gi|257861698|gb|EEV84497.1| GTP pyrophosphokinase [Staphylococcus aureus A5948]
 gi|282313567|gb|EFB43962.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus C101]
 gi|282317218|gb|EFB47592.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus C427]
 gi|282319389|gb|EFB49741.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus D139]
 gi|282321620|gb|EFB51945.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus M899]
 gi|282324965|gb|EFB55275.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282327217|gb|EFB57512.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282331332|gb|EFB60846.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus Btn1260]
 gi|282594531|gb|EFB99516.1| GTP pyrophosphokinase [Staphylococcus aureus A9765]
 gi|282595832|gb|EFC00796.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus C160]
 gi|283460855|gb|EFC07945.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus H19]
 gi|283790543|gb|EFC29360.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|290920339|gb|EFD97405.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus M1015]
 gi|291095178|gb|EFE25443.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus 58-424]
 gi|291466894|gb|EFF09414.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus M809]
 gi|294824689|gb|EFG41112.1| GTP pyrophosphokinase [Staphylococcus aureus A9754]
 gi|297575709|gb|EFH94425.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus MN8]
 gi|298694913|gb|ADI98135.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus ED133]
 gi|312437899|gb|ADQ76970.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus TCH60]
 gi|320140479|gb|EFW32333.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus MRSA131]
 gi|320144018|gb|EFW35787.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus MRSA177]
 gi|379993972|gb|EIA15417.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus DR10]
 gi|384230626|gb|AFH69873.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus 71193]
 gi|385196632|emb|CCG16262.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus HO 5096
           0412]
          Length = 736

 Score =  333 bits (853), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 193/498 (38%), Positives = 292/498 (58%), Gaps = 49/498 (9%)

Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
           E L    SYLS +E E V ++  +A+EAH GQ R++G P+I+HP++VA IL E+ LD  +
Sbjct: 18  EVLHKAKSYLSADEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPT 77

Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
           I AG LHD +EDT   TFE ++E F   V RIV+G TK+ K+ K + K E       +A+
Sbjct: 78  IVAGFLHDVIEDTPY-TFEDVKEMFNEEVARIVDGVTKLKKV-KYRSKEEQ------QAE 129

Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
           + R++F+A+ ++VRVI+VKLADRLHNMRTL  MP  KQ  I+ ETL+++APLA  LG+  
Sbjct: 130 NHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIYAPLAHRLGINT 189

Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
           IK ELE+ +  Y +   Y     R+ +L K+   E E   +  + +I  +  +D M ++ 
Sbjct: 190 IKWELEDTALRYIDNVQYF----RIVNLMKKKRSEREAYIETAIDRIRTE--MDRMNIEG 243

Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
           +I    K  YSIY+ ++K +   +++  +  +R+I+            +    CY +LGL
Sbjct: 244 DINGRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV------------NSINDCYAILGL 291

Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
           VH +W P+P   KDYIA PK N YQSLHTT++     +   LE+QIRT +M  IAE G+A
Sbjct: 292 VHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVVG---PNGDPLEIQIRTFDMHEIAEHGVA 348

Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
           AH++ +                  GK V   +     +++WL   +E  E    +  ++E
Sbjct: 349 AHWAYK-----------------EGKKVSEKDQTYQNKLNWL---KELAEADHTSSDAQE 388

Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
           F++T+  DL   +V+ FTP  ++  LP GA  +D+AY IH+E+GNKM+ AKVNG +V   
Sbjct: 389 FMETLKYDLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPID 448

Query: 612 HVLANAEVVEIITYNVSF 629
           ++L   ++VEI T   S+
Sbjct: 449 YILQTGDIVEIRTSKHSY 466


>gi|419433921|ref|ZP_13974039.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA40183]
 gi|379576922|gb|EHZ41846.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA40183]
          Length = 740

 Score =  333 bits (853), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 191/494 (38%), Positives = 291/494 (58%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YL+  ++  V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD  ++A G 
Sbjct: 16  TKEYLTEEDVHFVHKALVYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT+  T + +E EFG  VR IV+G   V+KLGK++ K    S+++  A++ R+M
Sbjct: 76  LHDVVEDTDA-TLDDLEREFGPDVRVIVDG---VTKLGKVEYK----SIEEQLAENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM+E++RVI+VKL+DRLHNMRTL H+   KQ  I+ ET++++APLA  LG+  +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISKETMEIYAPLAHRLGISSVKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y N  ++ K+   + +  +E E  ++E    ++ K+ED  +     +K +I   
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLED--YTTDRHLKGKIYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSI++ +   R    E+  +  +R I+              Q   Y +LG VH +W
Sbjct: 242 PKHIYSIFRKMQDKRKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHELW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA  K NGYQS+HTT    +Y     +E QIRT+ M  +AE G+AAH++ 
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKAMHEVAEYGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  V G V                 N+   A+ ++W+  + E Q++      ++EFVD++
Sbjct: 346 KKGVKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDSV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             + L   ++VFTP G +++LPK +  +D+AY IHT++G K   AKVNG +V  T  L  
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445

Query: 617 AEVVEIITYNVSFS 630
            + VEI+T   SF 
Sbjct: 446 GDQVEIVTNPNSFG 459


>gi|289167490|ref|YP_003445759.1| GTP pyrophosphokinase, stringent response protein [Streptococcus
           mitis B6]
 gi|288907057|emb|CBJ21891.1| GTP pyrophosphokinase, stringent response protein [Streptococcus
           mitis B6]
          Length = 740

 Score =  333 bits (853), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 191/494 (38%), Positives = 292/494 (59%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YLS  ++  V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD  ++A G 
Sbjct: 16  TQKYLSKEDVAFVHKALVYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT+  T + +E EFG+ VR IV+G   V+KLGK++ K    S+++  A++ R+M
Sbjct: 76  LHDVVEDTDA-TLDDLEREFGSDVRVIVDG---VTKLGKVEYK----SIEEQLAENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM+E++RVI+VKL+DRLHNMRTL H+   KQ  I+ ET++++APLA  LG+  +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISKETMEIYAPLAHRLGISSVKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y N  ++ K+   + +  +E E  ++E    ++ K+E  ++     +K +I   
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLE--EYTTDRHLKGKIYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSI++ +   R    E+  +  +R I+              Q   Y +LG VH +W
Sbjct: 242 PKHIYSIFRKMQDKRKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHELW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA  K NGYQS+HTT    +Y     +E QIRT+ M  +AE G+AAH++ 
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKAMHEVAEYGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  V G V                 N+   A+ ++W+  + E Q++      ++EFVD++
Sbjct: 346 KKGVKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDSV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             + L   ++VFTP G +++LPK +  +D+AY IHT++G K   AKVNG +V  T  L  
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445

Query: 617 AEVVEIITYNVSFS 630
            + VEI+T   SF 
Sbjct: 446 GDQVEIVTNPNSFG 459


>gi|428776221|ref|YP_007168008.1| (p)ppGpp synthetase I SpoT/RelA [Halothece sp. PCC 7418]
 gi|428690500|gb|AFZ43794.1| (p)ppGpp synthetase I, SpoT/RelA [Halothece sp. PCC 7418]
          Length = 765

 Score =  333 bits (853), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 193/481 (40%), Positives = 279/481 (58%), Gaps = 47/481 (9%)

Query: 144 NELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVED 203
            + +L+  A   A+  H+GQ RRSGEP+I HPV VA ++ +L      IAAG LHD VED
Sbjct: 43  QDAKLIAEAFQFAYNLHEGQYRRSGEPYIAHPVAVAGLIRDLGGGSAMIAAGFLHDIVED 102

Query: 204 TNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEE 263
           T++ T E I+E+FG  VR +VEG TK+SK  K   K E       +A++ R+MFLAM ++
Sbjct: 103 TDI-TCEEIQEKFGEGVRHLVEGVTKLSKF-KFSSKTER------QAENFRRMFLAMAKD 154

Query: 264 VRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMY 323
           +RV++VKLADRLHNMRTL H+ P KQ  IA ET ++FAPLA  LG+ + K ELE+LSF Y
Sbjct: 155 IRVVVVKLADRLHNMRTLEHLKPEKQKQIALETREIFAPLANRLGIGRFKWELEDLSFKY 214

Query: 324 TNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSI 383
              E + +++  VAD   + E  +E   +IL ++  D   +++     E++   K  Y I
Sbjct: 215 LEPEAFQEIRELVADRRADREARIENVIQILHQRF-DQAGIEI----EELKGRPKHLYGI 269

Query: 384 YKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAM 443
           Y+ + + +    E+  +A +R+I+K +            + CY  L ++H  + PIP   
Sbjct: 270 YQKMQQQQKEFEEIYDLAGVRVILKTR------------EDCYRALAVIHDAFKPIPGRF 317

Query: 444 KDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGL 503
           KDYI  PKPN YQSLHTT+I    +    +E+QIRT EM  IAE GIAAH+  +   TG 
Sbjct: 318 KDYIGLPKPNRYQSLHTTVIGTYGKP---IEMQIRTMEMHHIAEYGIAAHWLYK--ETGG 372

Query: 504 VGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGS 563
               +P                   + +WL  + EWQ +      ++E++++I  +L   
Sbjct: 373 SSDFKPTAEDE--------------KFTWLRQLLEWQNDL---KDAQEYMESIRDNLFED 415

Query: 564 RVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEII 623
            VFVFTP+G++  L +GAT VD+AY IHTE+G+ M  A+VNG        L N ++VEII
Sbjct: 416 DVFVFTPQGDVVALSRGATPVDFAYHIHTEVGHHMKGARVNGRWTVLDAPLHNGDIVEII 475

Query: 624 T 624
           T
Sbjct: 476 T 476


>gi|282928269|ref|ZP_06335874.1| GTP pyrophosphokinase [Staphylococcus aureus A10102]
 gi|282590076|gb|EFB95158.1| GTP pyrophosphokinase [Staphylococcus aureus A10102]
          Length = 736

 Score =  333 bits (853), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 193/498 (38%), Positives = 292/498 (58%), Gaps = 49/498 (9%)

Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
           E L    SYLS +E E V ++  +A+EAH GQ R++G P+I+HP++VA IL E+ LD  +
Sbjct: 18  EVLHKAKSYLSADEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPT 77

Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
           I AG LHD +EDT   TFE ++E F   V RIV+G TK+ K+ K + K E       +A+
Sbjct: 78  IVAGFLHDVIEDTPY-TFEDVKEMFNEEVARIVDGVTKLKKV-KYRSKEEQ------QAE 129

Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
           + R++F+A+ ++VRVI+VKLADRLHNMRTL  MP  KQ  I+ ETL+++APLA  LG+  
Sbjct: 130 NHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIYAPLAHRLGINT 189

Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
           IK ELE+ +  Y +   Y     R+ +L K+   E E   +  + +I  +  +D M ++ 
Sbjct: 190 IKWELEDTALRYIDNVQYF----RIVNLMKKKRSEREAYIETAIDRIRTE--MDRMNIEG 243

Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
           +I    K  YSIY+ ++K +   +++  +  +R+I+            +    CY +LGL
Sbjct: 244 DINGRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV------------NSINDCYAILGL 291

Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
           VH +W P+P   KDYIA PK N YQSLHTT++     +   LE+QIRT +M  IAE G+A
Sbjct: 292 VHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVVG---PNGDPLEIQIRTFDMHEIAEHGVA 348

Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
           AH++ +                  GK V   +     +++WL   +E  E    +  ++E
Sbjct: 349 AHWAYK-----------------EGKKVSEKDQTYQNKLNWL---KELAEADHTSSDAQE 388

Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
           F++T+  DL   +V+ FTP  ++  LP GA  +D+AY IH+E+GNKM+ AKVNG +V   
Sbjct: 389 FMETLKYDLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPID 448

Query: 612 HVLANAEVVEIITYNVSF 629
           ++L   ++VEI T   S+
Sbjct: 449 YILQTGDIVEIRTSKHSY 466


>gi|253732290|ref|ZP_04866455.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253724079|gb|EES92808.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
          Length = 736

 Score =  333 bits (853), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 193/498 (38%), Positives = 292/498 (58%), Gaps = 49/498 (9%)

Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
           E L    SYLS +E E V ++  +A+EAH GQ R++G P+I+HP++VA IL E+ LD  +
Sbjct: 18  EVLHKAKSYLSADEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPT 77

Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
           I AG LHD +EDT   TFE ++E F   V RIV+G TK+ K+ K + K E       +A+
Sbjct: 78  IVAGFLHDVIEDTPY-TFEDVKEMFNEEVARIVDGVTKLKKV-KYRSKEEQ------QAE 129

Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
           + R++F+A+ ++VRVI+VKLADRLHNMRTL  MP  KQ  I+ ETL+++APLA  LG+  
Sbjct: 130 NHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIYAPLAHRLGINT 189

Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
           IK ELE+ +  Y +   Y     R+ +L K+   E E   +  + +I  +  +D M ++ 
Sbjct: 190 IKWELEDTALRYIDNVQYF----RIVNLMKKKRSEREAYIETAIDRIRTE--MDRMNIEG 243

Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
           +I    K  YSIY+ ++K +   +++  +  +R+I+            +    CY +LGL
Sbjct: 244 DINGRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV------------NSINDCYAILGL 291

Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
           VH +W P+P   KDYIA PK N YQSLHTT++     +   LE+QIRT +M  IAE G+A
Sbjct: 292 VHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVVG---PNGDPLEIQIRTFDMHEIAEHGVA 348

Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
           AH++ +                  GK V   +     +++WL   +E  E    +  ++E
Sbjct: 349 AHWAYK-----------------EGKKVSEKDQTYQNKLNWL---KELAEADHTSSDAQE 388

Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
           F++T+  DL   +V+ FTP  ++  LP GA  +D+AY IH+E+GNKM+ AKVNG +V   
Sbjct: 389 FMETLKYDLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPID 448

Query: 612 HVLANAEVVEIITYNVSF 629
           ++L   ++VEI T   S+
Sbjct: 449 YILQTGDIVEIRTSKHSY 466


>gi|409386207|ref|ZP_11238654.1| GTP pyrophosphokinaseppGpp synthetase I [Lactococcus raffinolactis
           4877]
 gi|399206527|emb|CCK19569.1| GTP pyrophosphokinaseppGpp synthetase I [Lactococcus raffinolactis
           4877]
          Length = 736

 Score =  332 bits (852), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 191/494 (38%), Positives = 294/494 (59%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  Y+   ++ LV++AL+ A  AH  Q R+SGEP+IIHP++VA IL +L+LD  ++A G 
Sbjct: 16  TERYMGERDIILVKKALVYATNAHKEQYRQSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT   T + +E EFG  VR I +G   V+KLGK++ K+    +    A++ R+M
Sbjct: 76  LHDVVEDTES-TLDDLEAEFGPEVRIITDG---VTKLGKVEYKSHEEQL----AENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM++++RVI+VKLADRLHNMRTL H+ P KQ  I+ ET+ ++APLA  LG+ +IK EL
Sbjct: 128 LMAMSKDMRVILVKLADRLHNMRTLKHLRPDKQKRISRETMAIYAPLAHRLGISRIKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y +  ++ +++  + +   + E+ +EE    +  K++D  + +   V  EI   
Sbjct: 188 EDLSFRYLDEIEFYRIRGLMKEKRADRERLVEE----VTSKLKD--YTEKAGVVGEIYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSIY+ +   +   +E+  +  +R I+  +  S V          Y  LG +H +W
Sbjct: 242 PKHIYSIYRKMHDKKKRFDELYDLIAVRCIL--ETTSDV----------YTTLGYIHDLW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA PK NGYQS+HTT    +Y     +E QIRT EM  IAE G+AAH++ 
Sbjct: 290 KPMPGRFKDYIANPKANGYQSVHTT----VYGPKGPMEFQIRTREMHEIAEYGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +                  G+   ++   I   ++W++ + E Q+E   +  +++FV  +
Sbjct: 346 KA-----------------GRKDKVSANEITQNLNWIHELVELQDE---SNDAQDFVKAV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             D+L  +++VFTP G ++ LP G+  +D+AY IHT++G+K V AKVNG +   THVL  
Sbjct: 386 QEDILSEKIYVFTPAGAVQELPAGSGPIDFAYAIHTQVGDKAVGAKVNGRMTPLTHVLKT 445

Query: 617 AEVVEIITYNVSFS 630
            +VVEI+T   SF 
Sbjct: 446 GDVVEIVTNKTSFG 459


>gi|434392415|ref|YP_007127362.1| (p)ppGpp synthetase I, SpoT/RelA [Gloeocapsa sp. PCC 7428]
 gi|428264256|gb|AFZ30202.1| (p)ppGpp synthetase I, SpoT/RelA [Gloeocapsa sp. PCC 7428]
          Length = 761

 Score =  332 bits (852), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 201/507 (39%), Positives = 285/507 (56%), Gaps = 46/507 (9%)

Query: 121 AFKEDSPERLWEDLRPTISYLSPNELE--LVRRALMLAFEAHDGQKRRSGEPFIIHPVEV 178
           AF  + PE L + L        P+E +  L+ RA   A++ H GQ R+SGEP+I HPV V
Sbjct: 16  AFDVELPEWLQKCLVAPQESHQPSEQDNSLICRAFSFAYDLHQGQYRKSGEPYICHPVAV 75

Query: 179 ARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLG-KLK 237
           A +L +L      IAAG LHD VEDT+V + E IE+ FG  VR++VEG TK+S+   K  
Sbjct: 76  AGLLRDLGGSSAMIAAGFLHDVVEDTDV-SIEDIEQRFGNEVRQLVEGVTKLSEFSQKFS 134

Query: 238 CKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETL 297
            K E       +A++ R+MFLAM +++RVI+VKLADRLHNMRTL H+ P KQ  IA ET 
Sbjct: 135 SKTER------QAENFRRMFLAMAKDIRVIVVKLADRLHNMRTLEHLAPEKQRRIALETR 188

Query: 298 QVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKK 357
           ++FAPLA  LG+ + K ELE+L+F Y   E Y +++  VA+     E  L     +L  +
Sbjct: 189 EIFAPLANRLGIGRFKWELEDLAFKYLEPEAYRQIQDLVAEKRVNREARLTRVIDVLTAR 248

Query: 358 IEDDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGP 417
           +E  +   +     +I    K  Y IY+ + + +   +E+  IA +RII+  K       
Sbjct: 249 MEQAEIKCI-----DISGRPKHLYGIYQKMQRQQKEFHEIYDIAAIRIIVNTK------- 296

Query: 418 LCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQI 477
                + CY  L  VH  + PIP   KDYI  PKPN YQSLHT ++ F       LEVQI
Sbjct: 297 -----EECYRALAEVHDAFKPIPGRFKDYIGLPKPNRYQSLHTAVVGFTGRP---LEVQI 348

Query: 478 RTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIR 537
           RT EM  +AE GIAAH+  +   TG   H++                    + +WL  I 
Sbjct: 349 RTLEMHHVAEYGIAAHWKYK--ETGSSSHSQLKTSEE--------------KFTWLRQIL 392

Query: 538 EWQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNK 597
           EWQ +      ++E++D++  +L    V+VFTP+G++ +L  GAT VD+AY IHTE+GN 
Sbjct: 393 EWQNDLKDVNDAQEYLDSVKDNLFEDDVYVFTPKGDVVSLTAGATPVDFAYRIHTEVGNH 452

Query: 598 MVAAKVNGNLVSPTHVLANAEVVEIIT 624
              A+VN  +V+    L N ++V+I+T
Sbjct: 453 CCGARVNERMVTLDTPLKNGDIVDILT 479


>gi|421489591|ref|ZP_15936968.1| GTP diphosphokinase [Streptococcus anginosus SK1138]
 gi|400374658|gb|EJP27574.1| GTP diphosphokinase [Streptococcus anginosus SK1138]
          Length = 738

 Score =  332 bits (852), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 193/494 (39%), Positives = 291/494 (58%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YLS  ++ LV++AL  A + H GQ R+SGEP+IIHP++VA IL +L+LD  S+A G 
Sbjct: 16  TRKYLSSEDVTLVQKALFYAVDRHRGQFRQSGEPYIIHPIQVAGILAKLKLDAVSVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT   T + +E EFG  VR IV+G   V+KLGK+K  +    +    A++ R+M
Sbjct: 76  LHDVVEDT-AATLDDLEGEFGHDVRVIVDG---VTKLGKVKYMSHEEQL----AENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM++++RVI+VKLADRLHNMRTL H+   KQ  I+ ET++++APLA  LG+  +K EL
Sbjct: 128 LMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISSVKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+L+F Y N  ++ K    ++ L KE  +E EE    ++ KIE   +     +  EI   
Sbjct: 188 EDLAFRYLNPTEFYK----ISHLMKEKRREREELVDEVVHKIE--TYASERNLHGEIYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSIY+ +   +   +E+  +  +R I+              Q   Y +LG +H +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFDEIYDLIAIRCIL------------DTQSDVYAMLGYIHELW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA  K NGYQS+HTT    +Y     +E QIRT+EM  +AE G+AAH++ 
Sbjct: 290 RPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  + G V                 ++   A+ ++W+  + E Q++   +  +++FVD++
Sbjct: 346 KKGIKGQV-----------------DSKESAIGMNWIKEMMELQDQ---SNDAQDFVDSV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             + L   ++VFTP G +++LPK +  +D+AY IHT++G K V AKVNG +V  T  L  
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKAVGAKVNGRMVPLTTKLKT 445

Query: 617 AEVVEIITYNVSFS 630
            + VEIIT + SF 
Sbjct: 446 GDQVEIITSSNSFG 459


>gi|418437259|ref|ZP_13009054.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus VRS5]
 gi|418443174|ref|ZP_13014773.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus VRS7]
 gi|387726919|gb|EIK14456.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus VRS5]
 gi|387736850|gb|EIK23938.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus VRS7]
          Length = 736

 Score =  332 bits (852), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 193/498 (38%), Positives = 292/498 (58%), Gaps = 49/498 (9%)

Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
           E L    SYLS +E E V ++  +A+EAH GQ R++G P+I+HP++VA IL E+ LD  +
Sbjct: 18  EVLHKAKSYLSADEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPT 77

Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
           I AG LHD +EDT   TFE ++E F   V RIV+G TK+ K+ K + K E       +A+
Sbjct: 78  IVAGFLHDVIEDTPY-TFEDVKEMFNEEVARIVDGVTKLKKV-KYRSKEEQ------QAE 129

Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
           + R++F+A+ ++VRVI+VKLADRLHNMRTL  MP  KQ  I+ ETL+++APLA  LG+  
Sbjct: 130 NHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIYAPLAHRLGINT 189

Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
           IK ELE+ +  Y +   Y     R+ +L K+   E E   +  + +I  +  +D M ++ 
Sbjct: 190 IKWELEDTALRYIDNVQYF----RIVNLMKKKRSEREAYIETAIDRIRTE--MDRMNIEG 243

Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
           +I    K  YSIY+ ++K +   +++  +  +R+I+            +    CY +LGL
Sbjct: 244 DINGRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV------------NSINDCYAILGL 291

Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
           VH +W P+P   KDYIA PK N YQSLHTT++     +   LE+QIRT +M  IAE G+A
Sbjct: 292 VHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVVG---PNGDPLEIQIRTFDMHEIAEHGVA 348

Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
           AH++ +                  GK V   +     +++WL   +E  E    +  ++E
Sbjct: 349 AHWAYK-----------------EGKKVSEKDQTYQNKLNWL---KELAEADHTSSDAQE 388

Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
           F++T+  DL   +V+ FTP  ++  LP GA  +D+AY IH+E+GNKM+ AKVNG +V   
Sbjct: 389 FMETLKYDLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPID 448

Query: 612 HVLANAEVVEIITYNVSF 629
           ++L   ++VEI T   S+
Sbjct: 449 YILQTGDIVEIRTSKHSY 466


>gi|418446239|ref|ZP_13017712.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus VRS8]
 gi|387735171|gb|EIK22308.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus VRS8]
          Length = 736

 Score =  332 bits (852), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 193/498 (38%), Positives = 292/498 (58%), Gaps = 49/498 (9%)

Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
           E L    SYLS +E E V ++  +A+EAH GQ R++G P+I+HP++VA IL E+ LD  +
Sbjct: 18  EVLHKAKSYLSADEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPT 77

Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
           I AG LHD +EDT   TFE ++E F   V RIV+G TK+ K+ K + K E       +A+
Sbjct: 78  IVAGFLHDVIEDTPY-TFEDVKEMFNEEVARIVDGVTKLKKV-KYRSKEEQ------QAE 129

Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
           + R++F+A+ ++VRVI+VKLADRLHNMRTL  MP  KQ  I+ ETL+++APLA  LG+  
Sbjct: 130 NHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIYAPLAHRLGINT 189

Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
           IK ELE+ +  Y +   Y     R+ +L K+   E E   +  + +I  +  +D M ++ 
Sbjct: 190 IKWELEDTALRYIDNVQYF----RIVNLMKKKRSEREAYIETAIDRIRTE--MDRMNIEG 243

Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
           +I    K  YSIY+ ++K +   +++  +  +R+I+            +    CY +LGL
Sbjct: 244 DINGRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV------------NSINDCYAILGL 291

Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
           VH +W P+P   KDYIA PK N YQSLHTT++     +   LE+QIRT +M  IAE G+A
Sbjct: 292 VHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVVG---PNGDPLEIQIRTFDMHEIAEHGVA 348

Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
           AH++ +                  GK V   +     +++WL   +E  E    +  ++E
Sbjct: 349 AHWAYK-----------------EGKKVSEKDQTYQNKLNWL---KELAEADHTSSDAQE 388

Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
           F++T+  DL   +V+ FTP  ++  LP GA  +D+AY IH+E+GNKM+ AKVNG +V   
Sbjct: 389 FMETLKYDLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPID 448

Query: 612 HVLANAEVVEIITYNVSF 629
           ++L   ++VEI T   S+
Sbjct: 449 YILQTGDIVEIRTSKHSY 466


>gi|49486467|ref|YP_043688.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus MSSA476]
 gi|253733115|ref|ZP_04867280.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus TCH130]
 gi|257793707|ref|ZP_05642686.1| ppGpp hydrolase [Staphylococcus aureus A9781]
 gi|258410994|ref|ZP_05681274.1| ppGpp hydrolase [Staphylococcus aureus A9763]
 gi|258420205|ref|ZP_05683160.1| GTP pyrophosphokinase [Staphylococcus aureus A9719]
 gi|258438207|ref|ZP_05689491.1| ppGpp hydrolase [Staphylococcus aureus A9299]
 gi|258443670|ref|ZP_05692009.1| ppGpp hydrolase [Staphylococcus aureus A8115]
 gi|258446877|ref|ZP_05695031.1| GTP pyrophosphokinase [Staphylococcus aureus A6300]
 gi|258448791|ref|ZP_05696903.1| GTP pyrophosphokinase [Staphylococcus aureus A6224]
 gi|258453609|ref|ZP_05701587.1| ppGpp hydrolase [Staphylococcus aureus A5937]
 gi|282893138|ref|ZP_06301372.1| GTP pyrophosphokinase [Staphylococcus aureus A8117]
 gi|295406755|ref|ZP_06816560.1| GTP pyrophosphokinase [Staphylococcus aureus A8819]
 gi|297207646|ref|ZP_06924081.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|297245662|ref|ZP_06929527.1| GTP pyrophosphokinase [Staphylococcus aureus A8796]
 gi|300911728|ref|ZP_07129171.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus TCH70]
 gi|418424820|ref|ZP_12997933.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus VRS1]
 gi|418427775|ref|ZP_13000780.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus VRS2]
 gi|418430620|ref|ZP_13003529.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus VRS3a]
 gi|418433912|ref|ZP_13006353.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus VRS4]
 gi|418440156|ref|ZP_13011856.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus VRS6]
 gi|418449252|ref|ZP_13020636.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus VRS9]
 gi|418452062|ref|ZP_13023396.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus VRS10]
 gi|418455058|ref|ZP_13026317.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus VRS11a]
 gi|418457936|ref|ZP_13029135.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus VRS11b]
 gi|424775017|ref|ZP_18202016.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus CM05]
 gi|448740360|ref|ZP_21722339.1| GTP pyrophosphokinase [Staphylococcus aureus KT/314250]
 gi|448743282|ref|ZP_21725192.1| GTP pyrophosphokinase [Staphylococcus aureus KT/Y21]
 gi|59798269|sp|Q6G8T5.1|RELA_STAAS RecName: Full=GTP pyrophosphokinase; AltName: Full=(p)ppGpp
           synthase; AltName: Full=ATP:GTP
           3'-pyrophosphotransferase; AltName: Full=ppGpp synthase
           I
 gi|59798429|sp|Q99TL8.2|RELA_STAAN RecName: Full=GTP pyrophosphokinase; AltName: Full=(p)ppGpp
           synthase; AltName: Full=ATP:GTP
           3'-pyrophosphotransferase; AltName: Full=ppGpp synthase
           I
 gi|59800175|sp|P0A0E9.1|RELA_STAAW RecName: Full=GTP pyrophosphokinase; AltName: Full=(p)ppGpp
           synthase; AltName: Full=ATP:GTP
           3'-pyrophosphotransferase; AltName: Full=ppGpp synthase
           I
 gi|59800176|sp|P0A0F0.1|RELA_STAAU RecName: Full=GTP pyrophosphokinase; AltName: Full=(p)ppGpp
           synthase; AltName: Full=ATP:GTP
           3'-pyrophosphotransferase; AltName: Full=ppGpp synthase
           I
 gi|2580433|dbj|BAA23138.1| ppGpp hydrolase [Staphylococcus aureus]
 gi|49244910|emb|CAG43371.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus MSSA476]
 gi|253728871|gb|EES97600.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus TCH130]
 gi|257787679|gb|EEV26019.1| ppGpp hydrolase [Staphylococcus aureus A9781]
 gi|257840144|gb|EEV64608.1| ppGpp hydrolase [Staphylococcus aureus A9763]
 gi|257843916|gb|EEV68310.1| GTP pyrophosphokinase [Staphylococcus aureus A9719]
 gi|257848251|gb|EEV72242.1| ppGpp hydrolase [Staphylococcus aureus A9299]
 gi|257851076|gb|EEV75019.1| ppGpp hydrolase [Staphylococcus aureus A8115]
 gi|257854452|gb|EEV77401.1| GTP pyrophosphokinase [Staphylococcus aureus A6300]
 gi|257858069|gb|EEV80958.1| GTP pyrophosphokinase [Staphylococcus aureus A6224]
 gi|257864340|gb|EEV87090.1| ppGpp hydrolase [Staphylococcus aureus A5937]
 gi|282764456|gb|EFC04582.1| GTP pyrophosphokinase [Staphylococcus aureus A8117]
 gi|294968502|gb|EFG44526.1| GTP pyrophosphokinase [Staphylococcus aureus A8819]
 gi|296887663|gb|EFH26561.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|297177313|gb|EFH36565.1| GTP pyrophosphokinase [Staphylococcus aureus A8796]
 gi|300885974|gb|EFK81176.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus TCH70]
 gi|387717760|gb|EIK05758.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus VRS3a]
 gi|387718063|gb|EIK06058.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus VRS2]
 gi|387719270|gb|EIK07221.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus VRS1]
 gi|387724807|gb|EIK12446.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus VRS4]
 gi|387729870|gb|EIK17283.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus VRS6]
 gi|387736462|gb|EIK23556.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus VRS9]
 gi|387744943|gb|EIK31707.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus VRS10]
 gi|387745111|gb|EIK31873.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus VRS11a]
 gi|387746704|gb|EIK33433.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus VRS11b]
 gi|402346875|gb|EJU81945.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus CM05]
 gi|408423735|emb|CCJ11146.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus ST228]
 gi|408425725|emb|CCJ13112.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus ST228]
 gi|408427712|emb|CCJ15075.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus ST228]
 gi|408429701|emb|CCJ26866.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus ST228]
 gi|408431688|emb|CCJ19003.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus ST228]
 gi|408433682|emb|CCJ20967.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus ST228]
 gi|408435674|emb|CCJ22934.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus ST228]
 gi|408437658|emb|CCJ24901.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus ST228]
 gi|445548844|gb|ELY17091.1| GTP pyrophosphokinase [Staphylococcus aureus KT/314250]
 gi|445563411|gb|ELY19572.1| GTP pyrophosphokinase [Staphylococcus aureus KT/Y21]
          Length = 736

 Score =  332 bits (852), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 193/498 (38%), Positives = 292/498 (58%), Gaps = 49/498 (9%)

Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
           E L    SYLS +E E V ++  +A+EAH GQ R++G P+I+HP++VA IL E+ LD  +
Sbjct: 18  EVLHKAKSYLSADEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPT 77

Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
           I AG LHD +EDT   TFE ++E F   V RIV+G TK+ K+ K + K E       +A+
Sbjct: 78  IVAGFLHDVIEDTPY-TFEDVKEMFNEEVARIVDGVTKLKKV-KYRSKEEQ------QAE 129

Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
           + R++F+A+ ++VRVI+VKLADRLHNMRTL  MP  KQ  I+ ETL+++APLA  LG+  
Sbjct: 130 NHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIYAPLAHRLGINT 189

Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
           IK ELE+ +  Y +   Y     R+ +L K+   E E   +  + +I  +  +D M ++ 
Sbjct: 190 IKWELEDTALRYIDNVQYF----RIVNLMKKKRSEREAYIETAIDRIRTE--MDRMNIEG 243

Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
           +I    K  YSIY+ ++K +   +++  +  +R+I+            +    CY +LGL
Sbjct: 244 DINGRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV------------NSINDCYAILGL 291

Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
           VH +W P+P   KDYIA PK N YQSLHTT++     +   LE+QIRT +M  IAE G+A
Sbjct: 292 VHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVVG---PNGDPLEIQIRTFDMHEIAEHGVA 348

Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
           AH++ +                  GK V   +     +++WL   +E  E    +  ++E
Sbjct: 349 AHWAYK-----------------EGKKVSEKDQTYQNKLNWL---KELAEADHTSSDAQE 388

Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
           F++T+  DL   +V+ FTP  ++  LP GA  +D+AY IH+E+GNKM+ AKVNG +V   
Sbjct: 389 FMETLKYDLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPID 448

Query: 612 HVLANAEVVEIITYNVSF 629
           ++L   ++VEI T   S+
Sbjct: 449 YILQTGDIVEIRTSKHSY 466


>gi|210623794|ref|ZP_03294054.1| hypothetical protein CLOHIR_02005 [Clostridium hiranonis DSM 13275]
 gi|210153376|gb|EEA84382.1| hypothetical protein CLOHIR_02005 [Clostridium hiranonis DSM 13275]
          Length = 771

 Score =  332 bits (852), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 191/500 (38%), Positives = 293/500 (58%), Gaps = 50/500 (10%)

Query: 125 DSPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
           +S + L E L    SY    +L+ + +A  LA  AH  QKR+SGEP+ IHP+ VA I+ +
Sbjct: 31  ESDKELIEILDKVKSYAPNGDLDTIMKAYKLAKYAHRDQKRKSGEPYFIHPLAVANIICD 90

Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
           ++LD E+++ GLLHD VEDT   T+E IE  F   +  +V+G   V+KLGK+K +    S
Sbjct: 91  MQLDIETVSGGLLHDVVEDTEY-TYEDIESIFNKEIADLVDG---VTKLGKIKYR----S 142

Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
            ++ ++++LR+MFLAM +++RVI++KLADRLHNMRTL++M P K    ATETL+++  +A
Sbjct: 143 KEETQSENLRKMFLAMAKDIRVILIKLADRLHNMRTLNYMDPEKAKYKATETLEIYGGIA 202

Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
             LG+ +IK ELE+L+  Y + + Y ++  +V+    + E+ + +    L +K  +    
Sbjct: 203 HRLGISKIKWELEDLALRYIDHDGYYELVEKVSMKRSQREENIAKIVNCLQEKFAE---- 258

Query: 365 DLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
             M +  ++    K  YSIY+ +     S  E+  +  +R+            L    + 
Sbjct: 259 --MEIPCDVYGRPKHFYSIYRKMKNKNKSFEEIFDLTAVRV------------LVDTVKD 304

Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDL 484
           CY VLG+VH +W PIP   KDYIA PKPN YQSLHTT++    E    LE+QIRT EM  
Sbjct: 305 CYAVLGVVHTLWKPIPGRFKDYIAMPKPNMYQSLHTTVVGPDGEP---LEIQIRTHEMHN 361

Query: 485 IAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFV 544
           IAE GIAAH+  +  ++        N +  +          I  ++ WL  + EW+++  
Sbjct: 362 IAEYGIAAHWKYKEGIS--------NSKEDK----------IEEKLQWLRQMMEWEKDL- 402

Query: 545 GNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVN 604
                 EF+D +  D+  S+V+VFTP+G++  LP  +T +D+AY +HT IGNK V AKV+
Sbjct: 403 --KDPHEFLDALKEDVFSSQVYVFTPQGDVIELPAESTPIDFAYRVHTNIGNKCVGAKVD 460

Query: 605 GNLVSPTHVLANAEVVEIIT 624
           G +V+  + L N  +VEI+T
Sbjct: 461 GRMVTLDYKLQNGNIVEILT 480


>gi|315222474|ref|ZP_07864372.1| GTP diphosphokinase [Streptococcus anginosus F0211]
 gi|315188442|gb|EFU22159.1| GTP diphosphokinase [Streptococcus anginosus F0211]
          Length = 738

 Score =  332 bits (852), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 193/494 (39%), Positives = 291/494 (58%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YLS  ++ LV++AL  A + H GQ R+SGEP+IIHP++VA IL +L+LD  S+A G 
Sbjct: 16  TRKYLSSEDVTLVQKALFYAVDRHRGQFRQSGEPYIIHPIQVAGILAKLKLDAVSVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT   T + +E EFG  VR IV+G   V+KLGK+K  +    +    A++ R+M
Sbjct: 76  LHDVVEDT-AATLDDLEGEFGHEVRVIVDG---VTKLGKVKYMSHEEQL----AENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM++++RVI+VKLADRLHNMRTL H+   KQ  I+ ET++++APLA  LG+  +K EL
Sbjct: 128 LMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISSVKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+L+F Y N  ++ K    ++ L KE  +E EE    ++ KIE   +     +  EI   
Sbjct: 188 EDLAFRYLNPTEFYK----ISHLMKEKRREREELVDEVVHKIE--TYASERNLHGEIYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSIY+ +   +   +E+  +  +R I+              Q   Y +LG +H +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFDEIYDLIAIRCIL------------DTQSDVYAMLGYIHELW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA  K NGYQS+HTT    +Y     +E QIRT+EM  +AE G+AAH++ 
Sbjct: 290 RPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  + G V                 ++   A+ ++W+  + E Q++   +  +++FVD++
Sbjct: 346 KKGIKGQV-----------------DSKESAIGMNWIKEMMELQDQ---SNDAQDFVDSV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             + L   ++VFTP G +++LPK +  +D+AY IHT++G K V AKVNG +V  T  L  
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKAVGAKVNGRMVPLTTKLKT 445

Query: 617 AEVVEIITYNVSFS 630
            + VEIIT + SF 
Sbjct: 446 GDQVEIITSSNSFG 459


>gi|15927214|ref|NP_374747.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus N315]
 gi|21283313|ref|NP_646401.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus MW2]
 gi|148268114|ref|YP_001247057.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus JH9]
 gi|150394182|ref|YP_001316857.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus JH1]
 gi|269203259|ref|YP_003282528.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus ED98]
 gi|296275919|ref|ZP_06858426.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus MR1]
 gi|387150777|ref|YP_005742341.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Staphylococcus aureus
           04-02981]
 gi|415692758|ref|ZP_11454678.1| RelA/SpoT family protein [Staphylococcus aureus subsp. aureus
           CGS03]
 gi|417651056|ref|ZP_12300819.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21172]
 gi|417894333|ref|ZP_12538352.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21201]
 gi|417897939|ref|ZP_12541865.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21259]
 gi|418314427|ref|ZP_12925901.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21334]
 gi|418316727|ref|ZP_12928162.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21340]
 gi|418567175|ref|ZP_13131540.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21272]
 gi|418640299|ref|ZP_13202531.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-3]
 gi|418652842|ref|ZP_13214805.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-99]
 gi|418661102|ref|ZP_13222704.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-122]
 gi|418878550|ref|ZP_13432785.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1165]
 gi|418881316|ref|ZP_13435533.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1213]
 gi|418886899|ref|ZP_13441046.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1150]
 gi|418914735|ref|ZP_13468705.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus
           CIGC340D]
 gi|418919564|ref|ZP_13473509.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIGC348]
 gi|418931938|ref|ZP_13485773.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1750]
 gi|418934602|ref|ZP_13488424.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIGC128]
 gi|418988698|ref|ZP_13536370.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1835]
 gi|418991562|ref|ZP_13539223.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1096]
 gi|419784623|ref|ZP_14310386.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-M]
 gi|443636047|ref|ZP_21120165.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21236]
 gi|13701432|dbj|BAB42726.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus N315]
 gi|21204753|dbj|BAB95449.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus MW2]
 gi|147741183|gb|ABQ49481.1| (p)ppGpp synthetase I, SpoT/RelA [Staphylococcus aureus subsp.
           aureus JH9]
 gi|149946634|gb|ABR52570.1| RelA/SpoT family protein [Staphylococcus aureus subsp. aureus JH1]
 gi|262075549|gb|ACY11522.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus ED98]
 gi|285817316|gb|ADC37803.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Staphylococcus aureus
           04-02981]
 gi|315129918|gb|EFT85908.1| RelA/SpoT family protein [Staphylococcus aureus subsp. aureus
           CGS03]
 gi|329727240|gb|EGG63696.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21172]
 gi|341849441|gb|EGS90584.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21259]
 gi|341852478|gb|EGS93367.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21201]
 gi|365233463|gb|EHM74417.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21334]
 gi|365240690|gb|EHM81457.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21340]
 gi|371982879|gb|EHP00028.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21272]
 gi|375014863|gb|EHS08534.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-3]
 gi|375021010|gb|EHS14517.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-99]
 gi|375039533|gb|EHS32458.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-122]
 gi|377694672|gb|EHT19037.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1165]
 gi|377713116|gb|EHT37329.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1750]
 gi|377717791|gb|EHT41966.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1835]
 gi|377723684|gb|EHT47809.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1096]
 gi|377724401|gb|EHT48517.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1150]
 gi|377731059|gb|EHT55117.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1213]
 gi|377755391|gb|EHT79290.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus
           CIGC340D]
 gi|377767243|gb|EHT91050.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIGC348]
 gi|377770696|gb|EHT94457.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIGC128]
 gi|383363833|gb|EID41159.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-M]
 gi|443408556|gb|ELS67075.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21236]
          Length = 729

 Score =  332 bits (852), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 193/498 (38%), Positives = 292/498 (58%), Gaps = 49/498 (9%)

Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
           E L    SYLS +E E V ++  +A+EAH GQ R++G P+I+HP++VA IL E+ LD  +
Sbjct: 11  EVLHKAKSYLSADEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPT 70

Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
           I AG LHD +EDT   TFE ++E F   V RIV+G TK+ K+ K + K E       +A+
Sbjct: 71  IVAGFLHDVIEDTPY-TFEDVKEMFNEEVARIVDGVTKLKKV-KYRSKEEQ------QAE 122

Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
           + R++F+A+ ++VRVI+VKLADRLHNMRTL  MP  KQ  I+ ETL+++APLA  LG+  
Sbjct: 123 NHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIYAPLAHRLGINT 182

Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
           IK ELE+ +  Y +   Y     R+ +L K+   E E   +  + +I  +  +D M ++ 
Sbjct: 183 IKWELEDTALRYIDNVQYF----RIVNLMKKKRSEREAYIETAIDRIRTE--MDRMNIEG 236

Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
           +I    K  YSIY+ ++K +   +++  +  +R+I+            +    CY +LGL
Sbjct: 237 DINGRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV------------NSINDCYAILGL 284

Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
           VH +W P+P   KDYIA PK N YQSLHTT++     +   LE+QIRT +M  IAE G+A
Sbjct: 285 VHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVVG---PNGDPLEIQIRTFDMHEIAEHGVA 341

Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
           AH++ +                  GK V   +     +++WL   +E  E    +  ++E
Sbjct: 342 AHWAYK-----------------EGKKVSEKDQTYQNKLNWL---KELAEADHTSSDAQE 381

Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
           F++T+  DL   +V+ FTP  ++  LP GA  +D+AY IH+E+GNKM+ AKVNG +V   
Sbjct: 382 FMETLKYDLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPID 441

Query: 612 HVLANAEVVEIITYNVSF 629
           ++L   ++VEI T   S+
Sbjct: 442 YILQTGDIVEIRTSKHSY 459


>gi|59798426|sp|Q931Q4.2|RELA_STAAM RecName: Full=GTP pyrophosphokinase; AltName: Full=(p)ppGpp
           synthase; AltName: Full=ATP:GTP
           3'-pyrophosphotransferase; AltName: Full=ppGpp synthase
           I
          Length = 736

 Score =  332 bits (852), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 193/498 (38%), Positives = 292/498 (58%), Gaps = 49/498 (9%)

Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
           E L    SYLS +E E V ++  +A+EAH GQ R++G P+I+HP++VA IL E+ LD  +
Sbjct: 18  EVLHKAKSYLSADEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPT 77

Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
           I AG LHD +EDT   TFE ++E F   V RIV+G TK+ K+ K + K E       +A+
Sbjct: 78  IVAGFLHDVIEDTPY-TFEDVKEMFNEEVARIVDGVTKLKKV-KYRSKEEQ------QAE 129

Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
           + R++F+A+ ++VRVI+VKLADRLHNMRTL  MP  KQ  I+ ETL+++APLA  LG+  
Sbjct: 130 NHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIYAPLAHHLGINT 189

Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
           IK ELE+ +  Y +   Y     R+ +L K+   E E   +  + +I  +  +D M ++ 
Sbjct: 190 IKWELEDTALRYIDNVQYF----RIVNLMKKKRSEREAYIETAIDRIRTE--MDRMNIEG 243

Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
           +I    K  YSIY+ ++K +   +++  +  +R+I+            +    CY +LGL
Sbjct: 244 DINGRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV------------NSINDCYAILGL 291

Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
           VH +W P+P   KDYIA PK N YQSLHTT++     +   LE+QIRT +M  IAE G+A
Sbjct: 292 VHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVVG---PNGDPLEIQIRTFDMHEIAEHGVA 348

Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
           AH++ +                  GK V   +     +++WL   +E  E    +  ++E
Sbjct: 349 AHWAYK-----------------EGKKVSEKDQTYQNKLNWL---KELAEADHTSSDAQE 388

Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
           F++T+  DL   +V+ FTP  ++  LP GA  +D+AY IH+E+GNKM+ AKVNG +V   
Sbjct: 389 FMETLKYDLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPID 448

Query: 612 HVLANAEVVEIITYNVSF 629
           ++L   ++VEI T   S+
Sbjct: 449 YILQTGDIVEIRTSKHSY 466


>gi|325294217|ref|YP_004280731.1| (p)ppGpp synthetase I SpoT/RelA [Desulfurobacterium
           thermolithotrophum DSM 11699]
 gi|325064665|gb|ADY72672.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfurobacterium
           thermolithotrophum DSM 11699]
          Length = 716

 Score =  332 bits (852), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 199/481 (41%), Positives = 282/481 (58%), Gaps = 53/481 (11%)

Query: 147 ELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNV 206
           EL+ +A   A E H+GQ R+SGEPF  HP EVA IL EL +D  +I +GLLHD VEDT+ 
Sbjct: 21  ELIIKAYNFAKERHEGQFRKSGEPFFSHPAEVAYILAELRMDTPTIISGLLHDVVEDTDT 80

Query: 207 VTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRV 266
            T E IE+EFG  V  IV+G TK+          +  S ++  A+  R + +++ E++RV
Sbjct: 81  -TIEEIEKEFGKEVAFIVKGVTKLEGY-------QFSSKEERDAESFRNLLISLAEDIRV 132

Query: 267 IIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNA 326
           +IVKLADRLHNMRT+  M P  Q   A ETL ++APLA  LGMY+IK+ELE+LS  Y + 
Sbjct: 133 LIVKLADRLHNMRTMESMKPESQKRNAKETLTIYAPLANRLGMYRIKNELEDLSLKYLDP 192

Query: 327 EDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKA 386
           E Y +++++V +  ++    LEE  K + +K++++       +K +I+   K  Y IY+ 
Sbjct: 193 ETYNELEKKVREKKRKILPYLEEIIKTVREKLKEN------GLKGDIQWRVKHIYGIYRK 246

Query: 387 VLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDY 446
           ++       EV  +A +R+I        VG        CY +LG++H IW P+P  +KDY
Sbjct: 247 MVTKGIPFEEVYDVAGIRVI-----TDTVGA-------CYQILGIIHSIWIPVPGRIKDY 294

Query: 447 IATPKPNGYQSLHTTLI-PFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVG 505
           IATPKPN YQSLHTT++ P   +  F +E QIRT EM  +AE GIAAH+  +     L  
Sbjct: 295 IATPKPNMYQSLHTTVVGP---KGQF-IEFQIRTYEMHQVAEMGIAAHWKYKEGGGALTE 350

Query: 506 HARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSRV 565
             +                    R  WL  + EW +E       +EF++T+  DL    +
Sbjct: 351 TEKE-------------------RFIWLRNLLEWVKE---EKNPQEFIETVRNDLYSEDI 388

Query: 566 FVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITY 625
           +VFTP+G++K LP G+T VD+AY IHT IG++  AAKVNG LV   H+L + + VEIIT 
Sbjct: 389 YVFTPKGDLKTLPVGSTPVDFAYAIHTSIGHRCKAAKVNGKLVPLNHILQSGDKVEIITS 448

Query: 626 N 626
           N
Sbjct: 449 N 449


>gi|384864853|ref|YP_005750212.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp
           synthetase I) ((p)ppGpp synthetase) [Staphylococcus
           aureus subsp. aureus ECT-R 2]
 gi|312830020|emb|CBX34862.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp
           synthetase I) ((p)ppGpp synthetase) [Staphylococcus
           aureus subsp. aureus ECT-R 2]
          Length = 729

 Score =  332 bits (852), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 193/498 (38%), Positives = 292/498 (58%), Gaps = 49/498 (9%)

Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
           E L    SYLS +E E V ++  +A+EAH GQ R++G P+I+HP++VA IL E+ LD  +
Sbjct: 11  EVLHKAKSYLSADEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPT 70

Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
           I AG LHD +EDT   TFE ++E F   V RIV+G TK+ K+ K + K E       +A+
Sbjct: 71  IVAGFLHDVIEDTPY-TFEDVKEMFNEEVARIVDGVTKLKKV-KYRSKEEQ------QAE 122

Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
           + R++F+A+ ++VRVI+VKLADRLHNMRTL  MP  KQ  I+ ETL+++APLA  LG+  
Sbjct: 123 NHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIYAPLAHRLGINT 182

Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
           IK ELE+ +  Y +   Y     R+ +L K+   E E   +  + +I  +  +D M ++ 
Sbjct: 183 IKWELEDTALRYIDNVQYF----RIVNLMKKKRSEREAYIETAIDRIRTE--MDRMNIEG 236

Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
           +I    K  YSIY+ ++K +   +++  +  +R+I+            +    CY +LGL
Sbjct: 237 DINGRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV------------NSINDCYAILGL 284

Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
           VH +W P+P   KDYIA PK N YQSLHTT++     +   LE+QIRT +M  IAE G+A
Sbjct: 285 VHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVVG---PNGDPLEIQIRTFDMHEIAEHGVA 341

Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
           AH++ +                  GK V   +     +++WL   +E  E    +  ++E
Sbjct: 342 AHWAYK-----------------EGKKVSEKDQTYQNKLNWL---KELAEADHTSSDAQE 381

Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
           F++T+  DL   +V+ FTP  ++  LP GA  +D+AY IH+E+GNKM+ AKVNG +V   
Sbjct: 382 FMETLKYDLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPID 441

Query: 612 HVLANAEVVEIITYNVSF 629
           ++L   ++VEI T   S+
Sbjct: 442 YILQTGDIVEIRTSKHSY 459


>gi|418895396|ref|ZP_13449491.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1057]
 gi|377695202|gb|EHT19566.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1057]
          Length = 729

 Score =  332 bits (852), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 193/498 (38%), Positives = 292/498 (58%), Gaps = 49/498 (9%)

Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
           E L    SYLS +E E V ++  +A+EAH GQ R++G P+I+HP++VA IL E+ LD  +
Sbjct: 11  EVLHKAKSYLSADEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPT 70

Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
           I AG LHD +EDT   TFE ++E F   V RIV+G TK+ K+ K + K E       +A+
Sbjct: 71  IVAGFLHDVIEDTPY-TFEDVKEMFNEEVARIVDGVTKLKKV-KYRSKEEQ------QAE 122

Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
           + R++F+A+ ++VRVI+VKLADRLHNMRTL  MP  KQ  I+ ETL+++APLA  LG+  
Sbjct: 123 NHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIYAPLAHRLGINT 182

Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
           IK ELE+ +  Y +   Y     R+ +L K+   E E   +  + +I  +  +D M ++ 
Sbjct: 183 IKWELEDTALRYIDNVQYF----RIVNLMKKKRSEREAYIETAIDRIRTE--MDRMNIEG 236

Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
           +I    K  YSIY+ ++K +   +++  +  +R+I+            +    CY +LGL
Sbjct: 237 DINGRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV------------NSINDCYAILGL 284

Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
           VH +W P+P   KDYIA PK N YQSLHTT++     +   LE+QIRT +M  IAE G+A
Sbjct: 285 VHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVVG---PNGDPLEIQIRTFDMHEIAEHGVA 341

Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
           AH++ +                  GK V   +     +++WL   +E  E    +  ++E
Sbjct: 342 AHWAYK-----------------EGKKVSEKDQTYQNKLNWL---KELAEADHTSSDAQE 381

Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
           F++T+  DL   +V+ FTP  ++  LP GA  +D+AY IH+E+GNKM+ AKVNG +V   
Sbjct: 382 FMETLKYDLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPID 441

Query: 612 HVLANAEVVEIITYNVSF 629
           ++L   ++VEI T   S+
Sbjct: 442 YILQTGDIVEIRTNKHSY 459


>gi|443474532|ref|ZP_21064506.1| (p)ppGpp synthetase I, SpoT/RelA [Pseudanabaena biceps PCC 7429]
 gi|443020698|gb|ELS34625.1| (p)ppGpp synthetase I, SpoT/RelA [Pseudanabaena biceps PCC 7429]
          Length = 761

 Score =  332 bits (852), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 194/480 (40%), Positives = 279/480 (58%), Gaps = 48/480 (10%)

Query: 147 ELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNV 206
           ++V RAL  A+  HDGQ R SGEP+I+HP+ VA IL +L      IAAG LHD VEDT+V
Sbjct: 60  DVVCRALDFAYRLHDGQCRASGEPYILHPISVAAILKDLGGSNAMIAAGFLHDVVEDTDV 119

Query: 207 VTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRV 266
            + ++IEE+FG  +R++VEG TK+SKL   + K E+      +A++ R+MFLAM +++RV
Sbjct: 120 -SCDQIEEKFGKEIRQLVEGVTKLSKLS-FESKTES------QAENFRRMFLAMAQDIRV 171

Query: 267 IIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNA 326
           IIVKLADRLHNMRTL H+   KQ  I+ ET ++FAPLA  LG+ QIK ELE+++F Y   
Sbjct: 172 IIVKLADRLHNMRTLQHLRSEKQVLISRETREIFAPLANRLGLGQIKWELEDIAFKYIEP 231

Query: 327 EDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKA 386
           E Y  ++  VA+ ++  +++L E  K+L      D+   +     EI    K  Y I++ 
Sbjct: 232 EQYQMMESLVAETHESRQEQLTEVTKVL-----GDRLASMGIDDFEISGRPKHLYGIFRK 286

Query: 387 VLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDY 446
           + + +   NE+  I  +R+I+  K            + CY VL +VH  + PIP   KDY
Sbjct: 287 MERQKKQYNEIYDIQAVRVIVNTK------------EECYRVLAVVHDHFCPIPGRFKDY 334

Query: 447 IATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGH 506
           I  PKPN YQSLHT +I    +    +EVQIRT EM  IA+ GIAAH+            
Sbjct: 335 IGLPKPNRYQSLHTAVIGPKGQP---VEVQIRTWEMHHIADYGIAAHW------------ 379

Query: 507 ARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSRVF 566
                +     +V         + +WL  + EWQ E       +E++D++  DL  S V+
Sbjct: 380 -----KYKESNSVSKPLKGDDQKFTWLRQLVEWQREL---KDPQEYLDSVKEDLFDSEVY 431

Query: 567 VFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITYN 626
           VF+P+G++  LP+GAT VD+AY +HTE+GN    A VN  +V     L + ++V I+T N
Sbjct: 432 VFSPKGDVYCLPRGATPVDFAYRVHTEVGNHCSGALVNNVMVPLQRPLKHGDIVTILTQN 491


>gi|239637561|ref|ZP_04678533.1| GTP pyrophosphokinase [Staphylococcus warneri L37603]
 gi|239596779|gb|EEQ79304.1| GTP pyrophosphokinase [Staphylococcus warneri L37603]
          Length = 729

 Score =  332 bits (852), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 190/491 (38%), Positives = 290/491 (59%), Gaps = 49/491 (9%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           SYLS +E + V ++  +A+EAH GQ R++G P+I+HP++VA IL E+ LD  +I AG LH
Sbjct: 18  SYLSESEYQYVLKSYHIAYEAHQGQFRKNGLPYIMHPIQVAGILTEMRLDGPTIVAGFLH 77

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D +EDT   TF+ ++  F   V RIV+G TK+ K+ K + K E       +A++ R++F+
Sbjct: 78  DVIEDT-AYTFDDVKNMFNEEVARIVDGVTKLKKV-KYRSKEEQ------QAENHRKLFI 129

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           A+ ++VRVI+VKLADRLHNMRTL  MP  KQ  I+ ETL+++APLA  LG+  IK ELE+
Sbjct: 130 AIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISKETLEIYAPLAHRLGINTIKWELED 189

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
            +  Y ++  Y     R+ +L K+   E E      + +IE +  +D M++  EI    K
Sbjct: 190 TALRYIDSVQYF----RIVNLMKKKRSEREAYIDNAIGQIETE--MDKMSIVGEINGRPK 243

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIY+ ++K +   +++  +  +RII+            +    CY +LGLVH +W P
Sbjct: 244 HIYSIYRKMMKQKKQFDQIFDLLAIRIIV------------NTINDCYAILGLVHTLWKP 291

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PK N YQSLHTT++     +   LE+QIRT EM  IAE G+AAH++ + 
Sbjct: 292 MPGRFKDYIAMPKQNMYQSLHTTVVG---PNGDPLEIQIRTYEMHEIAEHGVAAHWAYK- 347

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                            GKTV     +   +++WL  + E       +  ++EF++++  
Sbjct: 348 ----------------EGKTVNEKTQDFQNKLNWLKDLAETDH---TSSDAQEFMESLKY 388

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           DL   +V+ FTP  ++  LP GA  +D+AY IH+E+GNKM+ AKVNG +V   ++L   +
Sbjct: 389 DLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPIDYILQTGD 448

Query: 619 VVEIITYNVSF 629
           ++EI T   S+
Sbjct: 449 IIEIRTSKHSY 459


>gi|37522317|ref|NP_925694.1| (p)ppGpp 3'-pyrophosphohydrolase [Gloeobacter violaceus PCC 7421]
 gi|35213317|dbj|BAC90689.1| (p)ppGpp 3'-pyrophosphohydrolase [Gloeobacter violaceus PCC 7421]
          Length = 758

 Score =  332 bits (851), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 199/531 (37%), Positives = 289/531 (54%), Gaps = 63/531 (11%)

Query: 102 LHVACKRWRLCLSPSVSSDAFKEDSPERLWEDLRPTISYLSPNELELVR----RALMLAF 157
           +H+    +     P    D        + W       S  +P  + L R    RA   A+
Sbjct: 9   MHLVSAEFETLQLPDWLKDCLDHPHGTQEWTTANSETSLTTPRTVSLDRGLIARAFDFAY 68

Query: 158 EAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFG 217
             H GQ R SGEP+I+HPV+VA +L EL  D   +AAG LHD +EDT   T E +E+ FG
Sbjct: 69  RLHTGQNRASGEPYILHPVQVAGMLRELGSDSAMVAAGFLHDIIEDT-ATTSEDLEQLFG 127

Query: 218 ATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHN 277
             VR +VEG TK+SK      K E       +A++ R+MFLAM +++RVI+VKLADRLHN
Sbjct: 128 EQVRLLVEGVTKLSKF-TFDSKEER------QAENFRRMFLAMAQDIRVIVVKLADRLHN 180

Query: 278 MRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVA 337
           MRTL  +P HKQ  IA ET+ +FAPLA  LG+++ K ELE+L+F Y + + Y  +++ V+
Sbjct: 181 MRTLDFLPTHKQRRIAQETMDIFAPLANRLGIWRFKWELEDLAFKYLDPDAYRHMQKLVS 240

Query: 338 DLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEV 397
               E E+ +++  + +  +I      D   +  EI    K  + IY+ + + +   +E+
Sbjct: 241 QKRAEREQFIDQVVQTIRAEI------DRQHIHGEITGRPKHLWGIYQKMQRQQKEFHEI 294

Query: 398 NQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQS 457
             ++ +RII++             Q+ CY  L +VH  + PIP   KDYI  PKPN YQS
Sbjct: 295 YDVSAVRIIVE------------QQEECYRALSIVHNKFRPIPGRFKDYIGLPKPNRYQS 342

Query: 458 LHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHY----SGRVFVTGLVGHARPNGRS 513
           LHT ++    +    LEVQIRT +M  IAE GIAAH+    +G V V             
Sbjct: 343 LHTAVVGPEGKP---LEVQIRTVDMHRIAEYGIAAHWKYKEAGSVVV------------- 386

Query: 514 PRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGE 573
                     A+   + +WL  + +WQ +      + E+++TI  DL  S V+VFTP+G+
Sbjct: 387 ----------ASQEEKFTWLRQLLDWQSDL---KDAGEYLETIKEDLFYSEVYVFTPKGD 433

Query: 574 IKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
           +  LP+G T VD+AY IHTE+GN+ V AKVN  +V     L N ++VEI+T
Sbjct: 434 VVELPRGGTPVDFAYRIHTEVGNRCVGAKVNDRMVPLDSQLKNGDIVEILT 484


>gi|422824966|ref|ZP_16873151.1| GTP diphosphokinase [Streptococcus sanguinis SK405]
 gi|422827233|ref|ZP_16875412.1| GTP diphosphokinase [Streptococcus sanguinis SK678]
 gi|422857077|ref|ZP_16903731.1| GTP diphosphokinase [Streptococcus sanguinis SK1]
 gi|422864569|ref|ZP_16911194.1| GTP diphosphokinase [Streptococcus sanguinis SK1058]
 gi|324992246|gb|EGC24168.1| GTP diphosphokinase [Streptococcus sanguinis SK405]
 gi|324994337|gb|EGC26251.1| GTP diphosphokinase [Streptococcus sanguinis SK678]
 gi|327459563|gb|EGF05909.1| GTP diphosphokinase [Streptococcus sanguinis SK1]
 gi|327490763|gb|EGF22544.1| GTP diphosphokinase [Streptococcus sanguinis SK1058]
          Length = 739

 Score =  332 bits (851), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 189/494 (38%), Positives = 290/494 (58%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YL+  ++  +++AL+ A + H GQ RRSGEP+I+HP++VA IL +L+LD  ++A G 
Sbjct: 16  TRKYLAAEDVAFIQKALIYAIDCHSGQFRRSGEPYIVHPIQVAGILAKLKLDAVTVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT   T + +E EFG  VR IV+G   V+KLGK+K K+    +    A++ R+M
Sbjct: 76  LHDVVEDTRA-TLDDLEREFGTDVRVIVDG---VTKLGKVKYKSHEEQL----AENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM+E++RVI+VKLADRLHNMRTL H+   KQ  I+ ET++++APLA  LG+  +K EL
Sbjct: 128 LMAMSEDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISSVKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y N  ++ K+   + +  +E E  +EE    +++KIE   +     +  +I   
Sbjct: 188 EDLSFRYLNEVEFYKISHMMKEKRREREALVEE----VVQKIE--TYAGERNLHGKIYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSIY+ +   +   +E+  +  +R I+              Q   Y +LG +H +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFDEIYDLIAIRCIL------------DTQSDVYAMLGYIHELW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA  K NGYQS+HTT    +Y     +E QIRT+EM  +AE G+AAH++ 
Sbjct: 290 RPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  V G V                 ++   A+ ++W+  + E Q++   +  +++FVD++
Sbjct: 346 KKGVKGQV-----------------DSKESAIGMNWIKELMELQDQ---SNNAKDFVDSV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
               L   ++VFTP G +++LPK +  +D+AY IHT++G K   AKVNG +V  T  L  
Sbjct: 386 KESYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLRT 445

Query: 617 AEVVEIITYNVSFS 630
            + VEIIT   SF 
Sbjct: 446 GDQVEIITNANSFG 459


>gi|422864152|ref|ZP_16910781.1| GTP diphosphokinase [Streptococcus sanguinis SK408]
 gi|327472975|gb|EGF18402.1| GTP diphosphokinase [Streptococcus sanguinis SK408]
          Length = 739

 Score =  332 bits (851), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 189/494 (38%), Positives = 290/494 (58%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YL+  ++  +++AL+ A + H GQ RRSGEP+I+HP++VA IL  L+LD  ++A G 
Sbjct: 16  TRKYLAAEDVAFIQKALIYAIDCHSGQFRRSGEPYIVHPIQVAGILATLKLDAVTVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT+  T + +E EFG  VR IV+G   V+KLGK+K K+    +    A++ R+M
Sbjct: 76  LHDVVEDTHA-TLDDLEREFGTDVRVIVDG---VTKLGKVKYKSHEEQL----AENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM+E++RVI+VKLADRLHNMRTL H+   KQ  I+ ET++++APLA  LG+  +K EL
Sbjct: 128 LMAMSEDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISSVKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y N  ++ K+   + +  +E E  +EE    +++KIE   +     +  +I   
Sbjct: 188 EDLSFRYLNEVEFYKISHMMKEKRREREALVEE----VVQKIE--TYAGERNLHGKIYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSIY+ +   +   +E+  +  +R I+              Q   Y +LG +H +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFDEIYDLIAIRCIL------------DTQSDVYAMLGYIHELW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA  K NGYQS+HTT    +Y     +E QIRT+EM  +AE G+AAH++ 
Sbjct: 290 RPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  V G V                 ++   A+ ++W+  + E Q++   +  +++FVD++
Sbjct: 346 KKGVKGQV-----------------DSKESAIGMNWIKELMELQDQ---SNNAKDFVDSV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
               L   ++VFTP G +++LPK +  +D+AY IHT++G K   AKVNG +V  T  L  
Sbjct: 386 KESYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLRT 445

Query: 617 AEVVEIITYNVSFS 630
            + VEIIT   SF 
Sbjct: 446 GDQVEIITNANSFG 459


>gi|417916440|ref|ZP_12560019.1| GTP diphosphokinase [Streptococcus mitis bv. 2 str. SK95]
 gi|342829647|gb|EGU63996.1| GTP diphosphokinase [Streptococcus mitis bv. 2 str. SK95]
          Length = 738

 Score =  332 bits (851), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 190/494 (38%), Positives = 292/494 (59%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YLS  ++  V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD  ++A G 
Sbjct: 16  TQKYLSKEDVAFVHKALVYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT   T + +E EFG  VR IV+G   V+KLGK++ K    S+++  A++ R+M
Sbjct: 76  LHDVVEDTEA-TLDDLEREFGHDVRIIVDG---VTKLGKVEYK----SIEEQLAENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM+E++RVI+VKL+DRLHNMRTL+H+   KQ  I+ ET++++APLA  LG+  +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLNHLRKDKQERISRETMEIYAPLAHRLGISSVKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y N  ++ K+   + +  +E E  ++E    ++ K+ED  +     +K +I   
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLED--YTSERNLKGKIYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSIY+ +   +    E+  +  +R I++                 Y +LG VH +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFEEIYDLIAIRCILE------------THSDVYAMLGYVHELW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA  K NGYQS+HTT    +Y     +E QIRT+EM  +AE G+AAH++ 
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  + G V                 N+   A+ ++W+  + E Q++      ++EFV+++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVESV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             + L   ++VFTP G +++LPK +  +D+AY IHT++G K   AKVNG +V  T  L  
Sbjct: 386 KEEYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445

Query: 617 AEVVEIITYNVSFS 630
            + VEI+T   SF 
Sbjct: 446 GDQVEIVTNPNSFG 459


>gi|428208449|ref|YP_007092802.1| (p)ppGpp synthetase I SpoT/RelA [Chroococcidiopsis thermalis PCC
           7203]
 gi|428010370|gb|AFY88933.1| (p)ppGpp synthetase I, SpoT/RelA [Chroococcidiopsis thermalis PCC
           7203]
          Length = 763

 Score =  332 bits (851), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 191/479 (39%), Positives = 276/479 (57%), Gaps = 47/479 (9%)

Query: 147 ELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNV 206
           +L+ RA   A++ H GQ R+SGEP+I HPV VA +L +L      IAAG LHD VEDT+V
Sbjct: 43  QLICRAFNFAYQLHQGQYRKSGEPYICHPVAVAGLLRDLGGGSAMIAAGFLHDVVEDTDV 102

Query: 207 VTFERIEEEFGATVRRIVEGETKVSKLGK-LKCKNENHSVQDVKADDLRQMFLAMTEEVR 265
            T E IE++FGA V+ +VEG TK+SK  +    K E       +A++ R+MFLAM +++R
Sbjct: 103 -TLEDIEQQFGAEVKHLVEGVTKLSKFSETFSSKTER------QAENFRRMFLAMAQDIR 155

Query: 266 VIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTN 325
           VI+VKLADRLHNMRTL H+P  K+  IA ET ++FAPLA  LG+   K ELE+L+F Y  
Sbjct: 156 VIVVKLADRLHNMRTLEHLPDEKRRRIALETREIFAPLANRLGIGTFKWELEDLTFKYLE 215

Query: 326 AEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYK 385
            E Y +++  VA+   + E  L    ++L + +       +     +I    K  Y IY+
Sbjct: 216 PEAYRQIQDLVAEKRTDREARLTRVIEVLQQGMAQSHIQCI-----DISGRPKHLYGIYQ 270

Query: 386 AVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKD 445
            + + +   +E+  +A +RII+K              + CY  L +VH  + PIP   KD
Sbjct: 271 KMQRQQKEFHEIYDLAAIRIIVKTN------------EECYRALAVVHDAFRPIPGRFKD 318

Query: 446 YIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVG 505
           YI  PKPN YQSLHTT++ F       LEVQIRT +M  IAE GIAAH+           
Sbjct: 319 YIGLPKPNRYQSLHTTVVGFTGRP---LEVQIRTIDMHHIAEYGIAAHWK---------- 365

Query: 506 HARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSRV 565
             +  G S   K   ++      + +WL  + EWQ +      ++E++++I  +L    V
Sbjct: 366 -YKETGGSSHTKFTPVDE-----KFTWLRQLLEWQNDL---KDAQEYLESIKDNLFEDEV 416

Query: 566 FVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
           +VFTP+G++  L  G+T +D+AY IHTE+GN    AKVNG +V+    L N ++V+I+T
Sbjct: 417 YVFTPKGDVVPLSPGSTAIDFAYRIHTEVGNHCAGAKVNGRMVTLDTALKNGDIVDILT 475


>gi|401684009|ref|ZP_10815892.1| GTP diphosphokinase [Streptococcus sp. BS35b]
 gi|418974870|ref|ZP_13522779.1| RelA/SpoT family protein [Streptococcus oralis SK1074]
 gi|419783424|ref|ZP_14309212.1| GTP diphosphokinase [Streptococcus oralis SK610]
 gi|383182308|gb|EIC74866.1| GTP diphosphokinase [Streptococcus oralis SK610]
 gi|383348241|gb|EID26200.1| RelA/SpoT family protein [Streptococcus oralis SK1074]
 gi|400186314|gb|EJO20526.1| GTP diphosphokinase [Streptococcus sp. BS35b]
          Length = 738

 Score =  332 bits (851), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 190/494 (38%), Positives = 293/494 (59%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YL+  ++  V++AL+ A + H GQ R+SGEP+IIHP++VA IL +L+LD  ++A G 
Sbjct: 16  TKEYLTKEDVAFVQKALIYAVDCHSGQFRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT+  T + +E EFG  VR IV+G   V+KLGK++ K    S+++  A++ R+M
Sbjct: 76  LHDVVEDTDA-TLDDLEREFGHDVRIIVDG---VTKLGKVEYK----SLEEQLAENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM+E++RVI+VKL+DRLHNMRTL H+   KQ  I+ ET++++APLA  LG+  +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISSVKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y N  ++ K+   + +  +E E  ++E    ++ K+E  ++     +K +I   
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLE--EYATERNLKGKIYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSIY+ +   +    E+  +  +R I+              Q   Y +LG VH +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHELW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA  K NGYQS+HTT    +Y     +E QIRT+EM  +AE G+AAH++ 
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  + G V                 N+   A+ ++W+  + E Q++      ++EFVD++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDSV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             + L   ++VFTP G +++LPK +  +D+AY IHT++G K   AKVNG +V  T  L  
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445

Query: 617 AEVVEIITYNVSFS 630
            + VEIIT   SF 
Sbjct: 446 GDQVEIITNPNSFG 459


>gi|15924624|ref|NP_372158.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus Mu50]
 gi|156979952|ref|YP_001442211.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus Mu3]
 gi|255006419|ref|ZP_05145020.2| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus
           Mu50-omega]
 gi|14247406|dbj|BAB57796.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus Mu50]
 gi|156722087|dbj|BAF78504.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus Mu3]
          Length = 729

 Score =  332 bits (851), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 193/498 (38%), Positives = 292/498 (58%), Gaps = 49/498 (9%)

Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
           E L    SYLS +E E V ++  +A+EAH GQ R++G P+I+HP++VA IL E+ LD  +
Sbjct: 11  EVLHKAKSYLSADEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPT 70

Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
           I AG LHD +EDT   TFE ++E F   V RIV+G TK+ K+ K + K E       +A+
Sbjct: 71  IVAGFLHDVIEDTPY-TFEDVKEMFNEEVARIVDGVTKLKKV-KYRSKEEQ------QAE 122

Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
           + R++F+A+ ++VRVI+VKLADRLHNMRTL  MP  KQ  I+ ETL+++APLA  LG+  
Sbjct: 123 NHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIYAPLAHHLGINT 182

Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
           IK ELE+ +  Y +   Y     R+ +L K+   E E   +  + +I  +  +D M ++ 
Sbjct: 183 IKWELEDTALRYIDNVQYF----RIVNLMKKKRSEREAYIETAIDRIRTE--MDRMNIEG 236

Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
           +I    K  YSIY+ ++K +   +++  +  +R+I+            +    CY +LGL
Sbjct: 237 DINGRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV------------NSINDCYAILGL 284

Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
           VH +W P+P   KDYIA PK N YQSLHTT++     +   LE+QIRT +M  IAE G+A
Sbjct: 285 VHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVVG---PNGDPLEIQIRTFDMHEIAEHGVA 341

Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
           AH++ +                  GK V   +     +++WL   +E  E    +  ++E
Sbjct: 342 AHWAYK-----------------EGKKVSEKDQTYQNKLNWL---KELAEADHTSSDAQE 381

Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
           F++T+  DL   +V+ FTP  ++  LP GA  +D+AY IH+E+GNKM+ AKVNG +V   
Sbjct: 382 FMETLKYDLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPID 441

Query: 612 HVLANAEVVEIITYNVSF 629
           ++L   ++VEI T   S+
Sbjct: 442 YILQTGDIVEIRTSKHSY 459


>gi|322377400|ref|ZP_08051891.1| GTP pyrophosphokinase [Streptococcus sp. M334]
 gi|417846678|ref|ZP_12492671.1| GTP diphosphokinase [Streptococcus mitis SK1073]
 gi|321281600|gb|EFX58609.1| GTP pyrophosphokinase [Streptococcus sp. M334]
 gi|339458311|gb|EGP70854.1| GTP diphosphokinase [Streptococcus mitis SK1073]
          Length = 740

 Score =  332 bits (851), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 190/494 (38%), Positives = 289/494 (58%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YL+  ++  V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD  ++A G 
Sbjct: 16  TKEYLTEEDVHFVHKALVYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT+  T + +E EFG  VR IV+G   V+KLGK+K K+    +    A++ R+M
Sbjct: 76  LHDVVEDTDA-TLDDLEREFGPDVRVIVDG---VTKLGKVKYKSHEEQL----AENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM+E++RVI+VKL+DRLHNMRTL H+   KQ  I+ ET++++APLA  LG+  +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISKETMEIYAPLAHRLGISSVKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y N  ++ K+   + +  +E E  ++E    ++ K+ED  +     +K +I   
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLED--YTTDRHLKGKIYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSI++ +   R    E+  +  +R I+              Q   Y +LG VH +W
Sbjct: 242 PKHIYSIFRKMQDKRKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHELW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA  K NGYQS+HTT    +Y     +E QIRT+ M  +AE G+AAH++ 
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKAMHEVAEYGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  + G V                 N+   A+ ++W+  + E Q++      ++EFVD++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDSV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             + L   ++VFTP G +++LPK +  +D+AY IHT++G K   AKVNG +V  T  L  
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445

Query: 617 AEVVEIITYNVSFS 630
            + VEI+T   SF 
Sbjct: 446 GDQVEIVTNPNSFG 459


>gi|389578358|ref|ZP_10168385.1| (p)ppGpp synthetase, RelA/SpoT family [Desulfobacter postgatei
           2ac9]
 gi|389399993|gb|EIM62215.1| (p)ppGpp synthetase, RelA/SpoT family [Desulfobacter postgatei
           2ac9]
          Length = 727

 Score =  332 bits (851), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 202/496 (40%), Positives = 282/496 (56%), Gaps = 58/496 (11%)

Query: 133 DLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
           D+   I   SP+ ++ L+ RA + +   H+GQ R SGEP++ HP+EVA IL +++LD ES
Sbjct: 6   DILDKIYEYSPDADVSLIDRAYIYSARVHEGQVRLSGEPYLSHPLEVANILADMKLDMES 65

Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV--K 249
           IAA LLHD +EDT   T E I + FG  V  IVEG TK+S L         H+   V  +
Sbjct: 66  IAAALLHDVIEDTPA-TKEDIADMFGPGVAHIVEGVTKLSAL---------HASTKVAQQ 115

Query: 250 ADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLS-HMPPHKQSSIATETLQVFAPLAKLLG 308
           A+ LR+M LAM +++RV+++KLADRLHNMRTL  H  P KQ++IA ETL ++AP+A  LG
Sbjct: 116 AESLRKMILAMADDIRVVLIKLADRLHNMRTLKYHKKPEKQAAIAQETLDIYAPIAARLG 175

Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
           ++ IK+ELE ++F YT  E++ ++   V     E E  + E +  L  K+E+      M 
Sbjct: 176 IFWIKNELEEIAFFYTLREEHDRILTLVNKAKDEQEAYINEVSASLHYKMEE------ME 229

Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
           +  +I+   K  YSIY+ +L      +EV  +   RII+   P             CY  
Sbjct: 230 LPCQIKGRFKSFYSIYQKMLSQGLEFDEVYDLIAFRIILDTVPQ------------CYAA 277

Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAER 488
           +G VH +W PI   +KDYI  PKPN YQS+HTT+I    E   R+E+QIRT EMD +AE 
Sbjct: 278 MGAVHSMWKPIYYKIKDYIGNPKPNMYQSIHTTVIGPKGE---RVEIQIRTHEMDRVAES 334

Query: 489 GIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMT 548
           GIAAH+S +                  G  +  N   +    +W+  + E QE       
Sbjct: 335 GIAAHWSYK-----------------EGTRIDENTGEL---FAWIRNLVENQENL---KD 371

Query: 549 SREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLV 608
             EF++ +  DL    ++VFTP GEIK LPK AT VD+AY IHTE+G +   A+VNG LV
Sbjct: 372 PDEFLENVRIDLYPGEIYVFTPVGEIKTLPKKATPVDFAYRIHTEVGAQCTGARVNGKLV 431

Query: 609 SPTHVLANAEVVEIIT 624
             +H L   + +EIIT
Sbjct: 432 PLSHELRTGDTIEIIT 447


>gi|434400053|ref|YP_007134057.1| (p)ppGpp synthetase I, SpoT/RelA [Stanieria cyanosphaera PCC 7437]
 gi|428271150|gb|AFZ37091.1| (p)ppGpp synthetase I, SpoT/RelA [Stanieria cyanosphaera PCC 7437]
          Length = 745

 Score =  332 bits (851), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 198/486 (40%), Positives = 281/486 (57%), Gaps = 48/486 (9%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           S  S  +  L+ RA   A++ H+GQ R+SGEP+I HPV VA +L +L  D  +IAAG LH
Sbjct: 29  SQKSDEQTNLICRAFNFAYQLHEGQYRKSGEPYIAHPVAVAGLLRDLGGDSVTIAAGFLH 88

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT V T E IEE FG  VR++VEG TK+SK      K E       +A++ R+MFL
Sbjct: 89  DVVEDTEV-TPEEIEERFGTDVRQLVEGVTKLSKFN-FSSKTER------QAENFRRMFL 140

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           +M +++RVI+VKLADRLHNMRTL H+ P KQ  IA ET ++FAPLA  LG+ + K ELE+
Sbjct: 141 SMAKDIRVIVVKLADRLHNMRTLEHLKPEKQQRIALETREIFAPLANRLGIGRFKWELED 200

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
           LSF Y   E Y +++  VA+   + E  +++  +I+  +++      L     E++   K
Sbjct: 201 LSFKYLEPEAYREIQALVAERRTDRETRIDKVTEIIRSRLQ-----KLGVNVFELKGRPK 255

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             Y IY+ + + +   +E+  IA +RII++              + CY  L +VH  + P
Sbjct: 256 HLYGIYQKMQRQQKEFHEIFDIAAVRIIVETN------------EECYRSLAVVHDAFKP 303

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           IP   KDYI  PKPN YQSLHTT++     +   LE+QIRT EM  IAE GIAAH+    
Sbjct: 304 IPGRFKDYIGLPKPNRYQSLHTTVVGL---NGRPLEIQIRTLEMHHIAEYGIAAHWK--- 357

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                    +  G S       LN+ +   + +WL  + EWQ +      ++E++D++  
Sbjct: 358 --------YKETGSS----NTRLNSDD--EKFTWLRQLLEWQNDL---KDAQEYIDSLKD 400

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           +L    V+VFTP G++  L  G+T VD+AY IHTE+GN M  A+VNG        L N +
Sbjct: 401 NLFEDDVYVFTPDGDVIALAHGSTPVDFAYRIHTEVGNHMKGARVNGRWSVLDRSLQNGD 460

Query: 619 VVEIIT 624
           +VEIIT
Sbjct: 461 IVEIIT 466


>gi|386394260|ref|ZP_10079041.1| (p)ppGpp synthetase, RelA/SpoT family [Desulfovibrio sp. U5L]
 gi|385735138|gb|EIG55336.1| (p)ppGpp synthetase, RelA/SpoT family [Desulfovibrio sp. U5L]
          Length = 737

 Score =  332 bits (851), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 201/496 (40%), Positives = 286/496 (57%), Gaps = 50/496 (10%)

Query: 129 RLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
           R+ E L  T  YL+  E  ++ +A + +  AH GQ R SGEP++ HP+E A IL ++ LD
Sbjct: 3   RINEILDKTAVYLTEAEQAIITKAYVFSAAAHAGQVRLSGEPYLSHPLEAAGILADMRLD 62

Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
             S+AAGLLHDTVEDT   T + IEE FG  V  IV+G TK+S L   + K E       
Sbjct: 63  AASVAAGLLHDTVEDTKA-TVDEIEELFGDEVADIVDGVTKIS-LIPFESKEE------A 114

Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
           +A+++R+M LAM  ++RV++VKLADRLHNMRTL    P K++ IA ET+ ++APLA  LG
Sbjct: 115 QAENIRKMILAMANDIRVVLVKLADRLHNMRTLEFQKPVKRALIAQETMDIYAPLANRLG 174

Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
           +++IK+ELE+LSF Y   + Y+++K  V   +   E  +E     ++ +I   Q +    
Sbjct: 175 LHRIKTELEDLSFKYLKPDVYSQIKAGVDRHHTLDESYIER----VIGQIR--QMVGENN 228

Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
           ++  I    K  +S++  +     +I++V+ +   R++++              + CY V
Sbjct: 229 IRARIIGRRKHLWSVFNKMRVQGLTIDQVHDLVAFRVLVETI------------RECYAV 276

Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAER 488
           LGLVH IW P+P   KDYI+ PK N YQSLHTT++    E   R+E+QIRT EM+ +AE 
Sbjct: 277 LGLVHSIWKPVPGRFKDYISMPKANMYQSLHTTVVGPDGE---RIEIQIRTVEMNRLAEE 333

Query: 489 GIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMT 548
           G+AAH+  +          R  G+          N     R +WL  I +WQ E      
Sbjct: 334 GVAAHWKYK---------EREKGKF---------NPKDVERFTWLRQIMDWQREL---KD 372

Query: 549 SREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLV 608
           SREFV  +  DL    V+VFTP+GE+K LP+GAT VD A++IHT +G     AKVNG LV
Sbjct: 373 SREFVANLRFDLFQDEVYVFTPKGEVKELPEGATAVDLAFVIHTAVGEHCAGAKVNGRLV 432

Query: 609 SPTHVLANAEVVEIIT 624
                L N + VEIIT
Sbjct: 433 PLETPLKNGDTVEIIT 448


>gi|427405631|ref|ZP_18895836.1| RelA/SpoT family protein [Selenomonas sp. F0473]
 gi|425708472|gb|EKU71511.1| RelA/SpoT family protein [Selenomonas sp. F0473]
          Length = 742

 Score =  332 bits (851), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 193/490 (39%), Positives = 287/490 (58%), Gaps = 50/490 (10%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           SY +  +++ + RA   A +AH GQ R SGE +IIHP+ VA IL  L +D E+I A LLH
Sbjct: 20  SYQADADVDKIERAYRFAEKAHRGQARISGEAYIIHPLNVAYILTGLHMDDETICAALLH 79

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT+  T E +EE FG  +  +++G   V+KLG+++      S +DV+ ++ R+MFL
Sbjct: 80  DVVEDTHA-TIEEMEELFGKNIAALIDG---VTKLGRIQYM----SKEDVQLENYRKMFL 131

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM +++RVI++KLADRLHNMRTL +M   K+  IA ETL+V+APLA  LG+  IK ELE+
Sbjct: 132 AMAKDIRVIMIKLADRLHNMRTLKYMREDKRQRIAHETLEVYAPLANRLGISNIKIELED 191

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
           L   Y   E Y  +   V    +E ++ + ++ + + +K+ED        ++ EI+   K
Sbjct: 192 LCLRYLEPEAYYTLVEEVKHKRQERQEFILDSIRQIKEKLED------AGIEAEIKGRAK 245

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIY+ + +   S+NE+  ++ +R+            L S  + CY VLG++H +W P
Sbjct: 246 HFYSIYRKMKRDNKSVNEIYDLSAVRV------------LVSSVKDCYGVLGVIHAMWKP 293

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           IP   KDYIA PK NGYQSLHTT++         LE+QIRT  M  I+E G+AAH+  + 
Sbjct: 294 IPGRFKDYIAMPKSNGYQSLHTTVMTHGDP----LEIQIRTHAMHRISEFGVAAHWKYK- 348

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                            GK+    + +   ++SWL  +   Q+E+      +EF + +  
Sbjct: 349 ---------------EAGKSTGATDES-DQKMSWLRQMVSLQKEY---DDPKEFFEALKL 389

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           D+    VFVFTPRG++ +LPKG+  +D+AY IHTEIG+  V AKVNG +V   + L N +
Sbjct: 390 DVFSDEVFVFTPRGDVIDLPKGSNPIDFAYHIHTEIGHHCVGAKVNGKIVPLEYKLKNGD 449

Query: 619 VVEIITYNVS 628
           +V I+T   S
Sbjct: 450 IVSIVTNKAS 459


>gi|357057600|ref|ZP_09118458.1| hypothetical protein HMPREF9334_00175 [Selenomonas infelix ATCC
           43532]
 gi|355374848|gb|EHG22139.1| hypothetical protein HMPREF9334_00175 [Selenomonas infelix ATCC
           43532]
          Length = 743

 Score =  332 bits (851), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 189/486 (38%), Positives = 288/486 (59%), Gaps = 50/486 (10%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           SY +  +L  +R+A   A +AH GQ R SG+ +I+HP+ VA IL  L LD E+I A LLH
Sbjct: 20  SYQADADLAKIRKAYDCAEKAHSGQVRISGDAYIVHPLNVAYILTGLHLDDETICAALLH 79

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT   T E ++ EFG  +  +++G   V+KLG++    E  S +DVK ++ R+MFL
Sbjct: 80  DVVEDT-CATLEEMDAEFGRNIMELIDG---VTKLGRI----EYMSKEDVKLENYRKMFL 131

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM +++RVI++KLADRLHNMRTL +M   K+  IA ET++V+APLA  LG+  IK ELE+
Sbjct: 132 AMAKDIRVIMIKLADRLHNMRTLKYMREDKRQRIAKETIEVYAPLANRLGISSIKVELED 191

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
           L   Y   E Y  +   V    +E ++ + E+ + + +K+E         ++ EI+   K
Sbjct: 192 LCLRYLEPEAYYALVEEVKHKRQERQEFIRESIRQIREKLE------AAGIEAEIKGRAK 245

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIY+ + +   S++E+  ++ +R+++            S  + CY VLG++H +W P
Sbjct: 246 HFYSIYRKMKRDNKSVSEIYDLSAVRVLV------------SSVKDCYGVLGVIHAMWKP 293

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           IP   KDYIA PK NGYQSLHTT++         LE+QIRT+ M  ++E G+AAH+  + 
Sbjct: 294 IPGRFKDYIAMPKSNGYQSLHTTVMTHGDP----LEIQIRTKAMHQVSEFGVAAHWKYK- 348

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                            G+++   + N   ++SWL  +   Q+E+      +EF + +  
Sbjct: 349 ---------------EAGRSIGATDEN-DQKMSWLRQMVSLQKEY---DDPKEFFEALKL 389

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           D+    VFVFTPRG++ +LPKG+  +D+AY IHTEIG++ V AKVNG +V   + L N +
Sbjct: 390 DVFSDEVFVFTPRGDVIDLPKGSNPIDFAYHIHTEIGHRCVGAKVNGKIVPLEYKLKNGD 449

Query: 619 VVEIIT 624
           +V I+T
Sbjct: 450 IVSIVT 455


>gi|419777910|ref|ZP_14303812.1| GTP diphosphokinase [Streptococcus oralis SK10]
 gi|383187663|gb|EIC80107.1| GTP diphosphokinase [Streptococcus oralis SK10]
          Length = 738

 Score =  332 bits (850), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 190/494 (38%), Positives = 293/494 (59%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YL+  ++  V++AL+ A + H GQ R+SGEP+IIHP++VA IL +L+LD  ++A G 
Sbjct: 16  TREYLTKEDVAFVQKALIYAVDCHSGQFRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT+  T + +E EFG  VR IV+G   V+KLGK++ K    S+++  A++ R+M
Sbjct: 76  LHDVVEDTDA-TLDDLEREFGHDVRIIVDG---VTKLGKVEYK----SLEEQLAENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM+E++RVI+VKL+DRLHNMRTL H+   KQ  I+ ET++++APLA  LG+  +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISSVKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y N  ++ K+   + +  +E E  ++E    ++ K+E  ++     +K +I   
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLE--EYATERNLKGKIYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSIY+ +   +    E+  +  +R I+              Q   Y +LG VH +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHELW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA  K NGYQS+HTT    +Y     +E QIRT+EM  +AE G+AAH++ 
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  + G V                 N+   A+ ++W+  + E Q++      ++EFVD++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDSV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             + L   ++VFTP G +++LPK +  +D+AY IHT++G K   AKVNG +V  T  L  
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445

Query: 617 AEVVEIITYNVSFS 630
            + VEIIT   SF 
Sbjct: 446 GDQVEIITNPNSFG 459


>gi|374579512|ref|ZP_09652606.1| (p)ppGpp synthetase, RelA/SpoT family [Desulfosporosinus youngiae
           DSM 17734]
 gi|374415594|gb|EHQ88029.1| (p)ppGpp synthetase, RelA/SpoT family [Desulfosporosinus youngiae
           DSM 17734]
          Length = 748

 Score =  332 bits (850), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 194/481 (40%), Positives = 285/481 (59%), Gaps = 40/481 (8%)

Query: 146 LELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTN 205
           L +V +A   A  AH  Q R SGE +I+HP++VA+IL ELE+D  ++AA LLHD VEDT 
Sbjct: 19  LAIVDKAYQFAERAHRNQLRNSGEDYILHPLQVAQILVELEMDEATVAASLLHDVVEDT- 77

Query: 206 VVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVR 265
             T   IE+EFG  +  +V+G   V+KLG+L  K    S  + + ++LR+MFLAM +++R
Sbjct: 78  AFTIHDIEKEFGPEIALLVDG---VTKLGRLAYK----SKVEQQVENLRKMFLAMAKDIR 130

Query: 266 VIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTN 325
           VI++KLADRLHNMRTL +    KQ  IA ETL++FAPLA  LG+++IK ELE+LSF Y  
Sbjct: 131 VILIKLADRLHNMRTLRYHSVEKQKEIAQETLEIFAPLANRLGIFRIKWELEDLSFRYLR 190

Query: 326 AEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYK 385
            ++Y  +   +A   +E E  +   N+++++  E    L+ + +  +I    K  YSIY+
Sbjct: 191 PQEYYDLVEGIALKRREREAYI---NEVIVQMRER---LNEVEIYADIAGRPKHFYSIYR 244

Query: 386 AVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKD 445
            +      +NE+  +  +R+I+                 CY  LG++H +W PIP   KD
Sbjct: 245 KMKTQNKELNEIYDLMAIRVIV------------DSVNDCYGALGIIHTMWKPIPGRFKD 292

Query: 446 YIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVG 505
           YIA PKPN YQSLHTTLI    E     E+QIRT EM   +E GIAAH+  +       G
Sbjct: 293 YIAMPKPNMYQSLHTTLIGVHGEP---FEIQIRTCEMHRTSEYGIAAHWKYK------EG 343

Query: 506 HARPNGRSPRGKTVCLNNA--NIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGS 563
            ++  GRS   K      A  N   ++SWL  + EWQ +   +  + EF++T+  DL   
Sbjct: 344 SSKECGRSSNNKDCGYKTASVNFDQKLSWLRQLLEWQHD---SRDAGEFMETLKIDLFAD 400

Query: 564 RVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEII 623
            VFVFTP+G++  LP  +  VD+AY +HT++G++ + AK+NG +V     L N +++EI+
Sbjct: 401 TVFVFTPKGDVVELPADSCPVDFAYRVHTDVGHRCIGAKINGRIVPLETKLNNGDILEIL 460

Query: 624 T 624
           T
Sbjct: 461 T 461


>gi|322374778|ref|ZP_08049292.1| GTP diphosphokinase [Streptococcus sp. C300]
 gi|321280278|gb|EFX57317.1| GTP diphosphokinase [Streptococcus sp. C300]
          Length = 738

 Score =  332 bits (850), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 190/494 (38%), Positives = 293/494 (59%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YL+  ++  V++AL+ A + H GQ R+SGEP+IIHP++VA IL +L+LD  ++A G 
Sbjct: 16  TREYLTKEDVAFVQKALIYAVDCHSGQFRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT+  T + +E EFG  VR IV+G   V+KLGK++ K    S+++  A++ R+M
Sbjct: 76  LHDVVEDTDA-TLDDLEREFGHDVRIIVDG---VTKLGKVEYK----SLEEQLAENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM+E++RVI+VKL+DRLHNMRTL H+   KQ  I+ ET++++APLA  LG+  +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISSVKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y N  ++ K+   + +  +E E  ++E    ++ K+E  ++     +K +I   
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLE--EYATERNLKGKIYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSIY+ +   +    E+  +  +R I+              Q   Y +LG VH +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHELW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA  K NGYQS+HTT    +Y     +E QIRT+EM  +AE G+AAH++ 
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  + G V                 N+   A+ ++W+  + E Q++      ++EFVD++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDSV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             + L   ++VFTP G +++LPK +  +D+AY IHT++G K   AKVNG +V  T  L  
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445

Query: 617 AEVVEIITYNVSFS 630
            + VEIIT   SF 
Sbjct: 446 GDQVEIITNPNSFG 459


>gi|335030989|ref|ZP_08524458.1| GTP diphosphokinase [Streptococcus anginosus SK52 = DSM 20563]
 gi|333770798|gb|EGL47791.1| GTP diphosphokinase [Streptococcus anginosus SK52 = DSM 20563]
          Length = 738

 Score =  332 bits (850), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 193/494 (39%), Positives = 291/494 (58%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YLS  ++ LV++AL  A + H GQ R+SGEP+IIHP++VA IL +L+LD  S+A G 
Sbjct: 16  TRKYLSSEDVVLVQKALFYAVDRHRGQFRQSGEPYIIHPIQVAGILAKLKLDAVSVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT   T + +E EFG  VR IV+G   V+KLGK+K  +    +    A++ R+M
Sbjct: 76  LHDVVEDT-AATLDDLEGEFGHDVRVIVDG---VTKLGKVKYMSHEEQL----AENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM++++RVI+VKLADRLHNMRTL H+   KQ  I+ ET++++APLA  LG+  +K EL
Sbjct: 128 LMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISSVKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+L+F Y N  ++ K    ++ L KE  +E EE    ++ KIE   +     +  EI   
Sbjct: 188 EDLAFRYLNPTEFYK----ISHLMKEKRREREELVDEVVHKIE--TYASERNLHGEIYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSIY+ +   +   +E+  +  +R I+              Q   Y +LG +H +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFDEIYDLIAIRCIL------------DTQSDVYAMLGYIHELW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA  K NGYQS+HTT    +Y     +E QIRT+EM  +AE G+AAH++ 
Sbjct: 290 RPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  + G V                 ++   A+ ++W+  + E Q++   +  +++FVD++
Sbjct: 346 KKGIKGQV-----------------DSKESAIGMNWIKEMMELQDQ---SNDAQDFVDSV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             + L   ++VFTP G +++LPK +  +D+AY IHT++G K V AKVNG +V  T  L  
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKAVGAKVNGRMVPLTTKLKT 445

Query: 617 AEVVEIITYNVSFS 630
            + VEIIT + SF 
Sbjct: 446 GDQVEIITSSNSFG 459


>gi|335046678|ref|ZP_08539701.1| GTP diphosphokinase [Oribacterium sp. oral taxon 108 str. F0425]
 gi|363896423|ref|ZP_09322974.1| hypothetical protein HMPREF9624_01718 [Oribacterium sp. ACB7]
 gi|333760464|gb|EGL38021.1| GTP diphosphokinase [Oribacterium sp. oral taxon 108 str. F0425]
 gi|361960709|gb|EHL13942.1| hypothetical protein HMPREF9624_01718 [Oribacterium sp. ACB7]
          Length = 755

 Score =  332 bits (850), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 199/506 (39%), Positives = 299/506 (59%), Gaps = 60/506 (11%)

Query: 127 PERLWEDLRPTISYLSPNE-LELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGEL 185
           PE L E L   +    P+E L ++ +A  +A E H  QKR+SGEP+IIHP+ VA IL +L
Sbjct: 20  PEELLEMLLKDVRSYHPSEDLSMITKAYEVAKEQHKEQKRKSGEPYIIHPLCVAIILADL 79

Query: 186 ELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSV 245
           E+D E+IAAGLLHD VEDT + T E +E+EF   V  +V+G TK++KL      N N   
Sbjct: 80  EMDKETIAAGLLHDVVEDTGM-TLEEVEKEFNPDVATLVDGVTKLTKL------NLNSDK 132

Query: 246 QDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAK 305
            +++A++LR+MF++M +++RVII+KLADRLHN+RTL +  P K+   A E+L++++PLA 
Sbjct: 133 VEMQAENLRKMFVSMAKDIRVIIIKLADRLHNLRTLEYQSPEKRKEKARESLEIYSPLAD 192

Query: 306 LLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLD 365
            LG+ +IK E+++LS  Y   E Y  +  +V   +K   +E +  N I+    E  + ++
Sbjct: 193 RLGISKIKIEMDDLSLKYLEPEVYYDLADKVH--FKREARE-DRINAIVE---EVREHIE 246

Query: 366 LMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQIC 425
              ++  I+   K  +SIYK ++    +I+++  +  +RII++              + C
Sbjct: 247 ESGIEANIKGRIKHFFSIYKKMVNQNKTIDQIYDLFAIRIIVE------------SVRDC 294

Query: 426 YHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTE 480
           Y VLG++H ++ PIP   KDYIA PKPN YQSLHTT+I     PF        E+QIRT 
Sbjct: 295 YAVLGVIHKMYRPIPGRFKDYIAMPKPNMYQSLHTTVIGRDGVPF--------EIQIRTF 346

Query: 481 EMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQ 540
           EM   AE GIAAH+           +    G   +     ++      ++ WL+ I EWQ
Sbjct: 347 EMHRTAEFGIAAHWK----------YKEQGGSDKKATETEMS------KMKWLHEILEWQ 390

Query: 541 EEFVGNMTSREFVDTITRD--LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKM 598
           ++      S+EF++ +  D  L    V+ FTP G++KNLP+G+T +D+AY IH+ +GNKM
Sbjct: 391 KD---ESDSKEFMNMVKSDLSLFNVNVYCFTPTGDVKNLPQGSTPIDFAYSIHSAVGNKM 447

Query: 599 VAAKVNGNLVSPTHVLANAEVVEIIT 624
           V AKVN  LV   + L N + V+IIT
Sbjct: 448 VGAKVNDKLVPIEYQLQNGDRVDIIT 473


>gi|417645315|ref|ZP_12295229.1| GTP diphosphokinase [Staphylococcus warneri VCU121]
 gi|445059472|ref|YP_007384876.1| GTP pyrophosphokinase [Staphylococcus warneri SG1]
 gi|330683916|gb|EGG95684.1| GTP diphosphokinase [Staphylococcus epidermidis VCU121]
 gi|443425529|gb|AGC90432.1| GTP pyrophosphokinase [Staphylococcus warneri SG1]
          Length = 729

 Score =  332 bits (850), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 190/491 (38%), Positives = 289/491 (58%), Gaps = 49/491 (9%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           SYLS +E + V ++  +A+EAH GQ R++G P+I+HP++VA IL E+ LD  +I AG LH
Sbjct: 18  SYLSESEYQYVLKSYHIAYEAHQGQFRKNGLPYIMHPIQVAGILTEMRLDGPTIVAGFLH 77

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D +EDT   TF+ ++  F   V RIV+G TK+ K+ K + K E       +A++ R++F+
Sbjct: 78  DVIEDT-AYTFDDVKNMFNEEVARIVDGVTKLKKV-KYRSKEEQ------QAENHRKLFI 129

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           A+ ++VRVI+VKLADRLHNMRTL  MP  KQ  I+ ETL+++APLA  LG+  IK ELE+
Sbjct: 130 AIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISKETLEIYAPLAHRLGINTIKWELED 189

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
            +  Y ++  Y     R+ +L K+   E E      + +IE +  +D M +  EI    K
Sbjct: 190 TALRYIDSVQYF----RIVNLMKKKRSEREAYIDNAIGQIETE--MDKMNIVGEINGRPK 243

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIY+ ++K +   +++  +  +RII+            +    CY +LGLVH +W P
Sbjct: 244 HIYSIYRKMMKQKKQFDQIFDLLAIRIIV------------NTINDCYAILGLVHTLWKP 291

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PK N YQSLHTT++     +   LE+QIRT EM  IAE G+AAH++ + 
Sbjct: 292 MPGRFKDYIAMPKQNMYQSLHTTVVG---PNGDPLEIQIRTYEMHEIAEHGVAAHWAYK- 347

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                            GKTV     +   +++WL  + E       +  ++EF++++  
Sbjct: 348 ----------------EGKTVNEKTQDFQNKLNWLKDLAETDH---TSSDAQEFMESLKY 388

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           DL   +V+ FTP  ++  LP GA  +D+AY IH+E+GNKM+ AKVNG +V   ++L   +
Sbjct: 389 DLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPIDYILQTGD 448

Query: 619 VVEIITYNVSF 629
           ++EI T   S+
Sbjct: 449 IIEIRTSKHSY 459


>gi|259500575|ref|ZP_05743477.1| GTP diphosphokinase [Lactobacillus iners DSM 13335]
 gi|302191266|ref|ZP_07267520.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
           [Lactobacillus iners AB-1]
 gi|329920168|ref|ZP_08276999.1| GTP diphosphokinase [Lactobacillus iners SPIN 1401G]
 gi|259167959|gb|EEW52454.1| GTP diphosphokinase [Lactobacillus iners DSM 13335]
 gi|328936622|gb|EGG33066.1| GTP diphosphokinase [Lactobacillus iners SPIN 1401G]
          Length = 750

 Score =  332 bits (850), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 198/485 (40%), Positives = 278/485 (57%), Gaps = 47/485 (9%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++   +  V +A   A +AH+GQ R SG+P+IIHP +VA  L  L LD +++AAG LHD
Sbjct: 19  YMNEEHVAFVEKAYAFAKDAHEGQFRESGQPYIIHPTQVAGTLASLGLDPDTVAAGYLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
           TVEDT  VT E I++EFG  V  IVEG TK+ K+      +E +      AD+ R+M +A
Sbjct: 79  TVEDT-PVTNEDIKKEFGKDVAFIVEGVTKLKKIKYKSKTHEEYL-----ADNHRKMLIA 132

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M +++RVI+VKLADRLHNM TL H+ P KQ  IA ETL ++APLA  LG+  IK ELE++
Sbjct: 133 MAKDLRVIMVKLADRLHNMHTLDHLRPDKQRRIADETLDIYAPLADRLGIGTIKWELEDM 192

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           S  Y N + Y ++   +     E E+ +  A   L   ++D      + +K EI    K 
Sbjct: 193 SLHYLNPQQYYRIVNLMQSKRSERERYISSAISTLKANLDD------LGIKYEIFGRPKH 246

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIYK ++      +E+  +  +R+I+K              + CY VLG VH  WTP+
Sbjct: 247 IYSIYKKMVNKHKEFSEIYDLLAVRVIVK------------TVRDCYAVLGAVHTKWTPM 294

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK NGYQSLHTT+I         LE+QIRTE+M  IAE G+AAH++ +  
Sbjct: 295 PGRFKDYIAVPKANGYQSLHTTIIG---PGGKPLEIQIRTEKMHQIAEYGVAAHWAYKEG 351

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
           V   V        +P  K           +I     I E Q+E      S EF++++  D
Sbjct: 352 VQTAV------AETPSSK-----------KIDMFREILELQDE---TKDSHEFMNSVKTD 391

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           +   RV+VFTP+G++  LPKG+  +D+ YMIH+E+G   V AKVN  +V   + L N +V
Sbjct: 392 IFSDRVYVFTPKGDVYELPKGSVPLDFGYMIHSEVGAHSVGAKVNDKIVPLDYQLKNGDV 451

Query: 620 VEIIT 624
           VE++T
Sbjct: 452 VEMLT 456


>gi|148988688|ref|ZP_01820121.1| GTP pyrophosphokinase [Streptococcus pneumoniae SP6-BS73]
 gi|147925889|gb|EDK76964.1| GTP pyrophosphokinase [Streptococcus pneumoniae SP6-BS73]
          Length = 739

 Score =  332 bits (850), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 190/494 (38%), Positives = 290/494 (58%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YL+  ++  V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD  ++A G 
Sbjct: 16  TKEYLTEEDVHFVHKALVYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT+  T + +E EFG  VR IV+G   V+KLGK++ K    S+++  A++ R+M
Sbjct: 76  LHDVVEDTDA-TLDDLEREFGPDVRMIVDG---VTKLGKVEYK----SIEEQLAENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM+E++RVI+VKL+DRLHNMRTL H+   KQ  I+ ET++++APLA  LG+  +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISKETMEIYAPLAHRLGISSVKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y N  ++ K+   + +  +E E  ++E    ++ K+E  ++     +K +I   
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLE--EYTTERHLKGKIYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSI++ +   R    E+  +  +R I+              Q   Y +LG VH  W
Sbjct: 242 PKHIYSIFRKMQDKRKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHEFW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA  K NGYQS+HTT    +Y     +E QIRT+EM  +AE G+AAH++ 
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  + G V                 N+   A+ ++W+  + E Q++      ++EFVD++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDSV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             + L   ++VFTP G +++LPK +  +D+AY IHT++G K   AKVNG +V  T  L  
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445

Query: 617 AEVVEIITYNVSFS 630
            + VEII    SF 
Sbjct: 446 GDQVEIIANPNSFG 459


>gi|325912633|ref|ZP_08175016.1| GTP diphosphokinase [Lactobacillus iners UPII 60-B]
 gi|325478054|gb|EGC81183.1| GTP diphosphokinase [Lactobacillus iners UPII 60-B]
          Length = 750

 Score =  332 bits (850), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 198/485 (40%), Positives = 278/485 (57%), Gaps = 47/485 (9%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++   +  V +A   A +AH+GQ R SG+P+IIHP +VA  L  L LD +++AAG LHD
Sbjct: 19  YMNEEHVAFVEKAYAFAKDAHEGQFRESGQPYIIHPTQVAGTLASLGLDPDTVAAGYLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
           TVEDT  VT E I++EFG  V  IVEG TK+ K+      +E +      AD+ R+M +A
Sbjct: 79  TVEDT-PVTNEDIKKEFGKDVAFIVEGVTKLKKIKYKSKTHEEYL-----ADNHRKMLIA 132

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M +++RVI+VKLADRLHNM TL H+ P KQ  IA ETL ++APLA  LG+  IK ELE++
Sbjct: 133 MAKDLRVIMVKLADRLHNMHTLDHLRPDKQRRIADETLDIYAPLADRLGIGTIKWELEDM 192

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           S  Y N + Y ++   +     E E+ +  A   L   ++D      + +K EI    K 
Sbjct: 193 SLHYLNPQQYYRIVNLMQSKRSERERYISSAISTLKANLDD------LGIKYEIFGRPKH 246

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIYK ++      +E+  +  +R+I+K              + CY VLG VH  WTP+
Sbjct: 247 IYSIYKKMVNKHKEFSEIYDLLAVRVIVK------------TVRDCYAVLGAVHTKWTPM 294

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK NGYQSLHTT+I         LE+QIRTE+M  IAE G+AAH++ +  
Sbjct: 295 PGRFKDYIAVPKANGYQSLHTTIIG---PGGKPLEIQIRTEKMHQIAEYGVAAHWAYKEG 351

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
           V   V        +P  K           +I     I E Q+E      S EF++++  D
Sbjct: 352 VQTAV------AETPSSK-----------KIDMFREILELQDE---TKDSHEFMNSVKTD 391

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           +   RV+VFTP+G++  LPKG+  +D+ YMIH+E+G   V AKVN  +V   + L N +V
Sbjct: 392 IFSDRVYVFTPKGDVYELPKGSVPLDFGYMIHSEVGAHSVGAKVNDKIVPLDYQLKNGDV 451

Query: 620 VEIIT 624
           VE++T
Sbjct: 452 VEMLT 456


>gi|385815572|ref|YP_005851963.1| ppGpp synthetase [Lactobacillus delbrueckii subsp. bulgaricus 2038]
 gi|325125609|gb|ADY84939.1| ppGpp synthetase [Lactobacillus delbrueckii subsp. bulgaricus 2038]
          Length = 738

 Score =  332 bits (850), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 197/484 (40%), Positives = 280/484 (57%), Gaps = 50/484 (10%)

Query: 141 LSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDT 200
           ++ ++L  V  A   A  AH+GQ R SG+P+I+HP++VA  L  L LD +++AAG LHDT
Sbjct: 5   ITADQLAFVESAYQFAARAHEGQTRASGQPYIVHPIQVAGTLANLGLDPDTVAAGFLHDT 64

Query: 201 VEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAM 260
           VEDT+V T + I+E+FGA V  IV+G TK++K        E  S ++  A++ R+M +AM
Sbjct: 65  VEDTSV-TNDDIKEKFGADVAFIVDGVTKLNKY-------EYKSHKEFLAENHRKMLIAM 116

Query: 261 TEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLS 320
            +++RVI+VKLADRLHNM TL H+ P KQ  IA ETL ++APLA  LG+  IK +LE++S
Sbjct: 117 AKDLRVILVKLADRLHNMHTLEHLRPDKQRRIAAETLDIYAPLADRLGIGTIKWKLEDMS 176

Query: 321 FMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEP 380
           F Y N E Y K+   +     E E  +++A   L         LD + +K +I    K  
Sbjct: 177 FHYMNPEAYYKIVSMMDAKRSEREGYIKDAIDYLRGT------LDSLGIKYDISGRPKHI 230

Query: 381 YSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIP 440
           YSIYK ++    + NE+  +  +R+I+         P       CY VLG VH  W P+P
Sbjct: 231 YSIYKKMVNKHKNFNEIYDLLAVRVIV---------PTVKD---CYAVLGAVHTKWKPMP 278

Query: 441 RAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFV 500
              KDYIA PK NGYQSLHTT+I         LE+QIRTEEM  +AE G+AAH++     
Sbjct: 279 GRFKDYIAMPKANGYQSLHTTIIG---PGGKPLEIQIRTEEMHKVAEYGVAAHWA----- 330

Query: 501 TGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDL 560
                + R N +    K         AL I      RE  E    +  + EF++ +  D+
Sbjct: 331 -----YKRGNFQGVDEKEGG------ALDIG-----REILELQKDSSDADEFMEAVHSDI 374

Query: 561 LGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVV 620
              +V+VFTP+GE+  LPKG+  +D+AY IHT++G+  + AKVN  LV   + L N +VV
Sbjct: 375 FADKVYVFTPKGEVYELPKGSVTLDFAYAIHTQVGDHAIGAKVNDKLVPLDYKLKNGDVV 434

Query: 621 EIIT 624
           +I+T
Sbjct: 435 DILT 438


>gi|418076861|ref|ZP_12714094.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA47502]
 gi|353747001|gb|EHD27659.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA47502]
          Length = 740

 Score =  332 bits (850), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 190/494 (38%), Positives = 290/494 (58%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YL+  ++  V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD  ++A G 
Sbjct: 16  TKEYLTEEDVHFVHKALIYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT+  T + +E EFG  VR IV+G   V+KLGK++ K    S+++  A++ R+M
Sbjct: 76  LHDVVEDTDA-TLDDLEREFGPDVRMIVDG---VTKLGKVEYK----SIEEQLAENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM+E++RVI+VKL+DRLHNMRTL H+   KQ  I+ ET++++APLA  LG+  +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISKETMEIYAPLAHRLGISSVKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y N  ++ K+   + +  +E E  ++E    ++ K+E  ++     +K +I   
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLE--EYTTERHLKGKIYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSI++ +   R    E+  +  +R I+              Q   Y +LG VH  W
Sbjct: 242 PKHIYSIFRKMQDKRKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHEFW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA  K NGYQS+HTT    +Y     +E QIRT+EM  +AE G+AAH++ 
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  + G V                 N+   A+ ++W+  + E Q++      ++EFVD++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDSV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             + L   ++VFTP G +++LPK +  +D+AY IHT++G K   AKVNG +V  T  L  
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445

Query: 617 AEVVEIITYNVSFS 630
            + VEII    SF 
Sbjct: 446 GDQVEIIANPNSFG 459


>gi|307243827|ref|ZP_07525958.1| GTP diphosphokinase [Peptostreptococcus stomatis DSM 17678]
 gi|306492830|gb|EFM64852.1| GTP diphosphokinase [Peptostreptococcus stomatis DSM 17678]
          Length = 741

 Score =  331 bits (849), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 201/496 (40%), Positives = 294/496 (59%), Gaps = 55/496 (11%)

Query: 132 EDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWE 190
           ++L   I   +PN +++ V RA  LA EAH  Q R+SGEP+IIHPV VA IL ++ELD +
Sbjct: 7   QNLIEKIKAYAPNADIDKVVRAYNLAKEAHKDQFRKSGEPYIIHPVAVANILADMELDID 66

Query: 191 SIAAGLLHDTVEDTNVVTFER--IEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
           +I  GLLHD VEDT+   FE   IEE FG  V  +V+G   V+KLGK+K   +  S    
Sbjct: 67  TICGGLLHDVVEDTD---FEEADIEEMFGKDVAALVDG---VTKLGKIKYMTKEES---- 116

Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
           +A +LR+MF+AM +++RV+++KL+DRLHNMRTL +M  +K    A ETL ++A +A  LG
Sbjct: 117 QASNLRKMFMAMAKDMRVMLIKLSDRLHNMRTLEYMDSNKVKYKAQETLDIYAGIAHRLG 176

Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
           +  IK ELE+L+F +   ++Y ++  RV    ++ E  ++E   I+ K ++D        
Sbjct: 177 ISTIKWELEDLAFRFLYPDEYYELVNRVNKKREQREAYIDEIVTIIKKDMDD------KG 230

Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
           V+ ++    K  YSI+K + K   S +E+  +  +R+            L    + CY V
Sbjct: 231 VECDVYGRPKHFYSIFKKMKKKNKSFDEIYDLTAVRV------------LVDTDRDCYAV 278

Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAER 488
           LG VH +W PIP   KDYIA PKPN YQSLHTT+I    E    +E+QIRT EM  +AE 
Sbjct: 279 LGEVHTLWKPIPGRFKDYIAMPKPNMYQSLHTTVIGSDGEP---VEIQIRTYEMHNVAEF 335

Query: 489 GIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMT 548
           GIAAH+  +  VT        N  S           ++  R+ WL  + EW+++      
Sbjct: 336 GIAAHWKYKEGVT-------DNSLS-----------DVDRRLQWLRQMMEWEKDVT---D 374

Query: 549 SREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLV 608
             EF+D +  D+  ++V+VFTP+G++  LP GAT +D+AY IH+++GNK V AKVNG +V
Sbjct: 375 PYEFLDALKEDVFNAQVYVFTPQGDVLELPNGATPIDFAYRIHSKVGNKCVGAKVNGRIV 434

Query: 609 SPTHVLANAEVVEIIT 624
              + L N ++VEI+T
Sbjct: 435 PLEYKLKNGQIVEILT 450


>gi|310829081|ref|YP_003961438.1| (p)ppGpp synthetase I [Eubacterium limosum KIST612]
 gi|308740815|gb|ADO38475.1| (p)ppGpp synthetase I [Eubacterium limosum KIST612]
          Length = 725

 Score =  331 bits (849), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 193/485 (39%), Positives = 284/485 (58%), Gaps = 58/485 (11%)

Query: 145 ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDT 204
           + EL+ +A  LA  AH  QKR SGE +IIHPV VA IL E ++D E+I A +LHD +EDT
Sbjct: 25  DTELILKAYHLADGAHKDQKRLSGEAYIIHPVSVAYILAEYKMDTETIVAAILHDVIEDT 84

Query: 205 NVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEV 264
           +  T++ I+E F   V  +VEG TK+ K+       E  S ++ +A++LR+M LAM++++
Sbjct: 85  SY-TYDDIKEMFNEQVADLVEGVTKIGKI-------EYQSKEESQAENLRKMVLAMSKDI 136

Query: 265 RVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYT 324
           RVI++KL DRLHNMRTL +M   KQ   + ETL ++AP+A  LG+  IK+ELE+L+  Y 
Sbjct: 137 RVILIKLVDRLHNMRTLEYMKESKQIEKSRETLDIYAPIANRLGIQTIKAELEDLALKYL 196

Query: 325 NAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIY 384
           + + Y  + ++V    +  E+ + +  KIL KKI      D + ++ +I    K  YSIY
Sbjct: 197 DPDGYYDLVKKVKMKKQSREEYINKVIKILEKKI------DEVGIEAKIYGRSKHFYSIY 250

Query: 385 KAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMK 444
           + +     + +E+  +  +R+I+               + CY VLG+VH  W PIP   K
Sbjct: 251 RKMKAQNRNFDEIYDLIAVRVIV------------DSVKDCYGVLGIVHTQWKPIPGRFK 298

Query: 445 DYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           DYIA PKPN YQS+HTT+I     PF        E+QIRT+EM   AE GIAAH+  +  
Sbjct: 299 DYIAMPKPNMYQSIHTTVIGPNGDPF--------EIQIRTKEMHETAEYGIAAHWKYKEG 350

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
           +T        N +  R +           ++SWL  I EWQ+E      + + V+TI  D
Sbjct: 351 ITD------SNNKELRYEN----------KMSWLRQILEWQKEL---DNANDLVETIKVD 391

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           LL   V+VFTP+G++  LP G+  +D+AY IH+++GN  V AKVNG +V   + L N ++
Sbjct: 392 LLNEEVYVFTPQGKVVELPMGSCPLDFAYRIHSDVGNSCVGAKVNGKIVPLNYTLNNGDI 451

Query: 620 VEIIT 624
           VEI+T
Sbjct: 452 VEIMT 456


>gi|312874138|ref|ZP_07734172.1| GTP diphosphokinase [Lactobacillus iners LEAF 2052A-d]
 gi|311090208|gb|EFQ48618.1| GTP diphosphokinase [Lactobacillus iners LEAF 2052A-d]
          Length = 750

 Score =  331 bits (849), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 198/485 (40%), Positives = 278/485 (57%), Gaps = 47/485 (9%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++   +  V +A   A +AH+GQ R SG+P+IIHP +VA  L  L LD +++AAG LHD
Sbjct: 19  YMNEEHVAFVEKAYAFAKDAHEGQFRESGQPYIIHPTQVAGTLASLGLDPDTVAAGYLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
           TVEDT  VT E I++EFG  V  IVEG TK+ K+      +E +      AD+ R+M +A
Sbjct: 79  TVEDT-PVTNEDIKKEFGKDVAFIVEGVTKLKKIKYKSKTHEEYL-----ADNHRKMLIA 132

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M +++RVI+VKLADRLHNM TL H+ P KQ  IA ETL ++APLA  LG+  IK ELE++
Sbjct: 133 MAKDLRVIMVKLADRLHNMHTLDHLRPDKQRRIADETLDIYAPLADRLGIGTIKWELEDM 192

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           S  Y N + Y ++   +     E E+ +  A   L   ++D      + +K EI    K 
Sbjct: 193 SLHYLNPQQYYRIVNLMQSKRSERERYISSAISTLKANLDD------LGIKYEIFGRPKH 246

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIYK ++      +E+  +  +R+I+K              + CY VLG VH  WTP+
Sbjct: 247 IYSIYKKMVNKHKEFSEIYDLLAVRVIVK------------TVRDCYAVLGAVHTKWTPM 294

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK NGYQSLHTT+I         LE+QIRTE+M  IAE G+AAH++ +  
Sbjct: 295 PGRFKDYIAVPKANGYQSLHTTIIG---PGGKPLEIQIRTEKMHQIAEYGVAAHWAYKEG 351

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
           V   V        +P  K           +I     I E Q+E      S EF++++  D
Sbjct: 352 VQTAV------AETPSSK-----------KIDMFREILELQDE---TKDSHEFMNSVKTD 391

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           +   RV+VFTP+G++  LPKG+  +D+ YMIH+E+G   V AKVN  +V   + L N +V
Sbjct: 392 IFSDRVYVFTPKGDVYELPKGSVPLDFGYMIHSEVGAHSVGAKVNDKIVPLDYQLKNGDV 451

Query: 620 VEIIT 624
           VE++T
Sbjct: 452 VEMLT 456


>gi|262051284|ref|ZP_06023508.1| GTP pyrophosphokinase [Staphylococcus aureus 930918-3]
 gi|259160921|gb|EEW45941.1| GTP pyrophosphokinase [Staphylococcus aureus 930918-3]
          Length = 729

 Score =  331 bits (849), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 193/498 (38%), Positives = 291/498 (58%), Gaps = 49/498 (9%)

Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
           E L    SYLS +E E V ++  +A+EAH GQ R++G P+I+HP++VA IL E+ LD  +
Sbjct: 11  EVLHKAKSYLSADEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPT 70

Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
           I AG LHD +EDT   TFE ++E F   V RIV+G TK+ K+ K   K E       +A+
Sbjct: 71  IVAGFLHDVIEDTPY-TFEDVKEMFNEEVARIVDGVTKLKKV-KYGSKEEQ------QAE 122

Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
           + R++F+A+ ++VRVI+VKLADRLHNMRTL  MP  KQ  I+ ETL+++APLA  LG+  
Sbjct: 123 NHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIYAPLAHRLGINT 182

Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
           IK ELE+ +  Y +   Y     R+ +L K+   E E   +  + +I  +  +D M ++ 
Sbjct: 183 IKWELEDTALRYIDNVQYF----RIVNLMKKKRSEREAYIETAIDRIRTE--MDRMNIEG 236

Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
           +I    K  YSIY+ ++K +   +++  +  +R+I+            +    CY +LGL
Sbjct: 237 DINGRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV------------NSINDCYAILGL 284

Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
           VH +W P+P   KDYIA PK N YQSLHTT++     +   LE+QIRT +M  IAE G+A
Sbjct: 285 VHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVVG---PNGDPLEIQIRTFDMHEIAEHGVA 341

Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
           AH++ +                  GK V   +     +++WL   +E  E    +  ++E
Sbjct: 342 AHWAYK-----------------EGKKVSEKDQTYQNKLNWL---KELAEADHTSSDAQE 381

Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
           F++T+  DL   +V+ FTP  ++  LP GA  +D+AY IH+E+GNKM+ AKVNG +V   
Sbjct: 382 FMETLKYDLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPID 441

Query: 612 HVLANAEVVEIITYNVSF 629
           ++L   ++VEI T   S+
Sbjct: 442 YILQTGDIVEIRTSKHSY 459


>gi|15901481|ref|NP_346085.1| GTP pyrophosphokinase [Streptococcus pneumoniae TIGR4]
 gi|149011496|ref|ZP_01832743.1| thiol peroxidase [Streptococcus pneumoniae SP19-BS75]
 gi|182684588|ref|YP_001836335.1| GTP pyrophosphokinase [Streptococcus pneumoniae CGSP14]
 gi|303255968|ref|ZP_07341996.1| GTP pyrophosphokinase [Streptococcus pneumoniae BS455]
 gi|387759759|ref|YP_006066737.1| GTP pyrophosphokinase [Streptococcus pneumoniae INV200]
 gi|419515152|ref|ZP_14054777.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae England14-9]
 gi|419523854|ref|ZP_14063429.1| relA/SpoT family protein [Streptococcus pneumoniae GA13723]
 gi|421247913|ref|ZP_15704392.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2082170]
 gi|421268804|ref|ZP_15719673.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae SPAR95]
 gi|14973135|gb|AAK75725.1| GTP pyrophosphokinase [Streptococcus pneumoniae TIGR4]
 gi|147764486|gb|EDK71417.1| thiol peroxidase [Streptococcus pneumoniae SP19-BS75]
 gi|182629922|gb|ACB90870.1| GTP pyrophosphokinase [Streptococcus pneumoniae CGSP14]
 gi|301802348|emb|CBW35102.1| GTP pyrophosphokinase [Streptococcus pneumoniae INV200]
 gi|302597027|gb|EFL64145.1| GTP pyrophosphokinase [Streptococcus pneumoniae BS455]
 gi|379556262|gb|EHZ21317.1| relA/SpoT family protein [Streptococcus pneumoniae GA13723]
 gi|379635701|gb|EIA00260.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae England14-9]
 gi|395612929|gb|EJG72962.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2082170]
 gi|395869058|gb|EJG80174.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae SPAR95]
          Length = 740

 Score =  331 bits (849), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 190/494 (38%), Positives = 290/494 (58%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YL+  ++  V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD  ++A G 
Sbjct: 16  TKEYLTEEDVHFVHKALVYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT+  T + +E EFG  VR IV+G   V+KLGK++ K    S+++  A++ R+M
Sbjct: 76  LHDVVEDTDA-TLDDLEREFGPDVRMIVDG---VTKLGKVEYK----SIEEQLAENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM+E++RVI+VKL+DRLHNMRTL H+   KQ  I+ ET++++APLA  LG+  +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISKETMEIYAPLAHRLGISSVKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y N  ++ K+   + +  +E E  ++E    ++ K+E  ++     +K +I   
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLE--EYTTERHLKGKIYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSI++ +   R    E+  +  +R I+              Q   Y +LG VH  W
Sbjct: 242 PKHIYSIFRKMQDKRKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHEFW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA  K NGYQS+HTT    +Y     +E QIRT+EM  +AE G+AAH++ 
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  + G V                 N+   A+ ++W+  + E Q++      ++EFVD++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDSV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             + L   ++VFTP G +++LPK +  +D+AY IHT++G K   AKVNG +V  T  L  
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445

Query: 617 AEVVEIITYNVSFS 630
            + VEII    SF 
Sbjct: 446 GDQVEIIANPNSFG 459


>gi|325912114|ref|ZP_08174512.1| GTP diphosphokinase [Lactobacillus iners UPII 143-D]
 gi|325476064|gb|EGC79232.1| GTP diphosphokinase [Lactobacillus iners UPII 143-D]
          Length = 750

 Score =  331 bits (849), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 198/485 (40%), Positives = 278/485 (57%), Gaps = 47/485 (9%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++   +  V +A   A +AH+GQ R SG+P+IIHP +VA  L  L LD +++AAG LHD
Sbjct: 19  YMNEEHVAFVEKAYAFAKDAHEGQFRESGQPYIIHPTQVAGTLASLGLDPDTVAAGYLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
           TVEDT  VT E I++EFG  V  IVEG TK+ K+      +E +      AD+ R+M +A
Sbjct: 79  TVEDT-PVTNEDIKKEFGKDVAFIVEGVTKLKKIKYKSKTHEEYL-----ADNHRKMLIA 132

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M +++RVI+VKLADRLHNM TL H+ P KQ  IA ETL ++APLA  LG+  IK ELE++
Sbjct: 133 MAKDLRVIMVKLADRLHNMHTLDHLRPDKQRRIADETLDIYAPLADRLGIGTIKWELEDM 192

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           S  Y N + Y ++   +     E E+ +  A   L   ++D      + +K EI    K 
Sbjct: 193 SLHYLNPQQYYRIVNLMQSKRSERERYISSAISTLKANLDD------LGIKYEIFGRPKH 246

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIYK ++      +E+  +  +R+I+K              + CY VLG VH  WTP+
Sbjct: 247 IYSIYKKMVNKHKEFSEIYDLLAVRVIVK------------TVRDCYAVLGAVHTKWTPM 294

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK NGYQSLHTT+I         LE+QIRTE+M  IAE G+AAH++ +  
Sbjct: 295 PGRFKDYIAVPKANGYQSLHTTIIG---PGGKPLEIQIRTEKMHQIAEYGVAAHWAYKEG 351

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
           V   V        +P  K           +I     I E Q+E      S EF++++  D
Sbjct: 352 VQTAV------AETPSSK-----------KIDMFREILELQDE---TKDSHEFMNSVKTD 391

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           +   RV+VFTP+G++  LPKG+  +D+ YMIH+E+G   V AKVN  +V   + L N +V
Sbjct: 392 IFSDRVYVFTPKGDVYELPKGSVPLDFGYMIHSEVGAHSVGAKVNDKIVPLDYQLKNGDV 451

Query: 620 VEIIT 624
           VE++T
Sbjct: 452 VEMLT 456


>gi|421234533|ref|ZP_15691151.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2061617]
 gi|395600387|gb|EJG60544.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2061617]
          Length = 740

 Score =  331 bits (849), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 190/494 (38%), Positives = 290/494 (58%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YL+  ++  V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD  ++A G 
Sbjct: 16  TKEYLTEEDVHFVHKALVYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT+  T + +E EFG  VR IV+G   V+KLGK++ K    S+++  A++ R+M
Sbjct: 76  LHDVVEDTDA-TLDDLEREFGPDVRVIVDG---VTKLGKVEYK----SIEEQLAENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM+E++RVI+VKL+DRLHNMRTL H+   KQ  I+ ET++++APLA  LG+  +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISKETMEIYAPLAHRLGISSVKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y N  ++ K+   + +  +E E  ++E    ++ K+E  ++     +K +I   
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLE--EYTTERHLKGKIYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSI++ +   R    E+  +  +R I+              Q   Y +LG VH  W
Sbjct: 242 PKHIYSIFRKMQDKRKRFEEIYDLIAIRCIL------------DAQSDVYAMLGYVHEFW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA  K NGYQS+HTT    +Y     +E QIRT+EM  +AE G+AAH++ 
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  + G V                 N+   A+ ++W+  + E Q++      ++EFVD++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDSV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             + L   ++VFTP G +++LPK +  +D+AY IHT++G K   AKVNG +V  T  L  
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445

Query: 617 AEVVEIITYNVSFS 630
            + VEII    SF 
Sbjct: 446 GDQVEIIANPNSFG 459


>gi|73662434|ref|YP_301215.1| GTP pyrophosphokinase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|418575969|ref|ZP_13140116.1| GTP pyrophosphokinase [Staphylococcus saprophyticus subsp.
           saprophyticus KACC 16562]
 gi|72494949|dbj|BAE18270.1| GTP pyrophosphokinase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|379325717|gb|EHY92848.1| GTP pyrophosphokinase [Staphylococcus saprophyticus subsp.
           saprophyticus KACC 16562]
          Length = 729

 Score =  331 bits (849), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 195/500 (39%), Positives = 291/500 (58%), Gaps = 53/500 (10%)

Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
           E L    SYLS  + E V ++  +A+EAH+GQ R++G P+I+HP++VA IL E+ LD  +
Sbjct: 11  EVLSKAKSYLSKEDYEFVLKSYHIAYEAHEGQFRKNGLPYIMHPIQVAGILTEMHLDGPT 70

Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
           I AG LHD +EDT   TF+ ++  F   +  IVEG TK+ K+ K + K E       +A+
Sbjct: 71  IVAGFLHDVIEDT-PYTFDDVKGMFNEEIAVIVEGVTKLKKV-KYRSKEEQ------QAE 122

Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
           + R++F+A+ ++VRVI+VKLADRLHNMRTL  MP  KQ  I+ ETL+++APLA  LG+  
Sbjct: 123 NHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISKETLEIYAPLAHRLGINT 182

Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
           IK ELE+ +  YT++  Y     R+ +L K+   E EE  +  + +I+ D  L  M +  
Sbjct: 183 IKWELEDTALRYTDSVQYF----RIVNLMKKKRSEREEYIQNAINQIQSD--LTSMNIVG 236

Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
           +I    K  YSIY+ ++K +   +++  +  +RII+            +    CY VLGL
Sbjct: 237 DINGRPKHIYSIYRKMVKQKKQFDQIFDLLAIRIIV------------NSINDCYAVLGL 284

Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
           VH +W P+P   KDYIA PK N YQSLHTT++     +   LE+QIRT EM  IAE G+A
Sbjct: 285 VHTLWKPMPGRFKDYIAMPKQNMYQSLHTTVVG---PNGDPLEIQIRTFEMHEIAEHGVA 341

Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTS-- 549
           AH++ +                  GK V   + N   +++W+  + E       N TS  
Sbjct: 342 AHWAYK-----------------EGKKVTEKSQNFNNKLNWIKELAE-----TNNTTSDA 379

Query: 550 REFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVS 609
            EF++T+  DL   +V+ FTP  ++  LP GA  +D+AY +H+E+GNKM+ +KVNG +  
Sbjct: 380 EEFMETLKFDLQSDKVYAFTPESDVIELPYGAVPIDFAYAVHSEVGNKMIGSKVNGKIEP 439

Query: 610 PTHVLANAEVVEIITYNVSF 629
             +VL   ++VEI T   S+
Sbjct: 440 IDYVLQTGDIVEIRTSKHSY 459


>gi|229918416|ref|YP_002887062.1| (p)ppGpp synthetase I SpoT/RelA [Exiguobacterium sp. AT1b]
 gi|229469845|gb|ACQ71617.1| (p)ppGpp synthetase I, SpoT/RelA [Exiguobacterium sp. AT1b]
          Length = 729

 Score =  331 bits (849), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 196/500 (39%), Positives = 293/500 (58%), Gaps = 52/500 (10%)

Query: 132 EDLRPTIS-YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWE 190
           EDL   +  Y+  +++  V+RA   A   H GQ RRSGEP+I+HPV+VA IL ++ LD  
Sbjct: 10  EDLLDALGEYMGDDDIAEVKRAYEYAKLHHTGQFRRSGEPYILHPVQVAGILVDIGLDAT 69

Query: 191 SIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKA 250
           +I   LLHD VEDT++ + +++ ++FG  V  +V+G   V+KLGK+K K++   +    A
Sbjct: 70  TIIGALLHDVVEDTDI-SLQQLTDDFGPDVAMLVDG---VTKLGKIKYKSKKEEL----A 121

Query: 251 DDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMY 310
           ++ R+M +AM E+VRVI++KLADRLHNMRTL HMP  KQ   A ETL++FAPLA  +G+ 
Sbjct: 122 ENHRKMIIAMAEDVRVILIKLADRLHNMRTLQHMPKEKQVQKAEETLEIFAPLAHRMGIS 181

Query: 311 QIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVK 370
            IK ELE++S  Y N + Y K    +  + K+   E E     ++ ++  +  L+ + + 
Sbjct: 182 TIKWELEDISLRYINPQQYYK----IVSMMKQKRTEREALVTSVITEV--NGVLEEVHID 235

Query: 371 TEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLG 430
            ++    K  YSIY  ++K +   NE+  +  +RII+               + CY VLG
Sbjct: 236 ADVNGRPKHIYSIYNKMVKHKKEFNEIYDLMAVRIIV------------DSIRDCYAVLG 283

Query: 431 LVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGI 490
           ++H  + P+P   KDYIA PKPN YQSLHTT+I    E    LEVQIRT++M  IAE GI
Sbjct: 284 IIHTQYKPMPGRFKDYIAMPKPNMYQSLHTTVIGPKGEP---LEVQIRTKDMHFIAEFGI 340

Query: 491 AAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSR 550
           AAH++ +                  GK V  N  +   +I+ L  I E Q++      + 
Sbjct: 341 AAHWAYK-----------------EGKNVSTNGFD--EKIAHLREILELQKD---TTDAE 378

Query: 551 EFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSP 610
           EF++++  D     ++VFTP+G++  LPKG+  +DYAY IHTEIG++M  AKVNG +V  
Sbjct: 379 EFMESLKVDFFSDMLYVFTPKGDVFELPKGSVPIDYAYRIHTEIGHRMTGAKVNGRMVPL 438

Query: 611 THVLANAEVVEIITYNVSFS 630
            + L   +++EIIT   S+ 
Sbjct: 439 DYKLETGDIIEIITSKHSYG 458


>gi|15903530|ref|NP_359080.1| GTP pyrophosphokinase [Streptococcus pneumoniae R6]
 gi|116516708|ref|YP_816914.1| GTP pyrophosphokinase [Streptococcus pneumoniae D39]
 gi|148994885|ref|ZP_01823906.1| GTP pyrophosphokinase [Streptococcus pneumoniae SP9-BS68]
 gi|168488644|ref|ZP_02712843.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
           [Streptococcus pneumoniae SP195]
 gi|225857262|ref|YP_002738773.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
           [Streptococcus pneumoniae P1031]
 gi|387626842|ref|YP_006063018.1| GTP pyrophosphokinase [Streptococcus pneumoniae INV104]
 gi|417679609|ref|ZP_12329005.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA17570]
 gi|418087321|ref|ZP_12724490.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA47033]
 gi|418126295|ref|ZP_12763201.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA44511]
 gi|418130789|ref|ZP_12767672.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA07643]
 gi|418146887|ref|ZP_12783665.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA13637]
 gi|418167244|ref|ZP_12803899.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA17971]
 gi|418187624|ref|ZP_12824147.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA47360]
 gi|418192081|ref|ZP_12828583.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA47388]
 gi|418202856|ref|ZP_12839285.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA52306]
 gi|418214838|ref|ZP_12841572.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA54644]
 gi|418230417|ref|ZP_12857016.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae EU-NP01]
 gi|418234842|ref|ZP_12861418.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA08780]
 gi|419443000|ref|ZP_13983027.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA13224]
 gi|419455996|ref|ZP_13995953.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae EU-NP04]
 gi|419478281|ref|ZP_14018105.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA18068]
 gi|419484873|ref|ZP_14024648.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA43257]
 gi|419493772|ref|ZP_14033497.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA47210]
 gi|421218270|ref|ZP_15675164.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2070335]
 gi|421220732|ref|ZP_15677571.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2070425]
 gi|421222984|ref|ZP_15679766.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2070531]
 gi|421227823|ref|ZP_15684525.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2072047]
 gi|421236736|ref|ZP_15693333.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2071004]
 gi|421243571|ref|ZP_15700084.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2081074]
 gi|421266635|ref|ZP_15717515.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae SPAR27]
 gi|421271053|ref|ZP_15721907.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae SPAR48]
 gi|421279420|ref|ZP_15730226.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA17301]
 gi|421285880|ref|ZP_15736656.1| GTP pyrophosphokinase [Streptococcus pneumoniae GA60190]
 gi|421294842|ref|ZP_15745563.1| GTP pyrophosphokinase [Streptococcus pneumoniae GA56113]
 gi|421301499|ref|ZP_15752169.1| GTP pyrophosphokinase [Streptococcus pneumoniae GA19998]
 gi|444382813|ref|ZP_21181012.1| GTP diphosphokinase [Streptococcus pneumoniae PCS8106]
 gi|444385762|ref|ZP_21183833.1| GTP diphosphokinase [Streptococcus pneumoniae PCS8203]
 gi|444409163|ref|ZP_21205761.1| GTP diphosphokinase [Streptococcus pneumoniae PNI0076]
 gi|444412787|ref|ZP_21209106.1| GTP diphosphokinase [Streptococcus pneumoniae PNI0153]
 gi|444414527|ref|ZP_21210784.1| GTP diphosphokinase [Streptococcus pneumoniae PNI0199]
 gi|444422019|ref|ZP_21217684.1| GTP diphosphokinase [Streptococcus pneumoniae PNI0446]
 gi|15459146|gb|AAL00291.1| GTP pyrophosphokinase [Streptococcus pneumoniae R6]
 gi|116077284|gb|ABJ55004.1| GTP pyrophosphokinase [Streptococcus pneumoniae D39]
 gi|147926953|gb|EDK77998.1| GTP pyrophosphokinase [Streptococcus pneumoniae SP9-BS68]
 gi|183572878|gb|EDT93406.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
           [Streptococcus pneumoniae SP195]
 gi|225725767|gb|ACO21619.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
           [Streptococcus pneumoniae P1031]
 gi|301794628|emb|CBW37078.1| GTP pyrophosphokinase [Streptococcus pneumoniae INV104]
 gi|332072474|gb|EGI82957.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA17570]
 gi|353758337|gb|EHD38929.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA47033]
 gi|353796235|gb|EHD76580.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA44511]
 gi|353802113|gb|EHD82413.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA07643]
 gi|353812462|gb|EHD92697.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA13637]
 gi|353829236|gb|EHE09370.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA17971]
 gi|353849609|gb|EHE29614.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA47360]
 gi|353855167|gb|EHE35137.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA47388]
 gi|353867413|gb|EHE47308.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA52306]
 gi|353869568|gb|EHE49449.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA54644]
 gi|353885298|gb|EHE65087.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae EU-NP01]
 gi|353886464|gb|EHE66246.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA08780]
 gi|379551700|gb|EHZ16794.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA13224]
 gi|379565717|gb|EHZ30709.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA18068]
 gi|379581626|gb|EHZ46510.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA43257]
 gi|379592345|gb|EHZ57161.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA47210]
 gi|379627972|gb|EHZ92578.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae EU-NP04]
 gi|395583039|gb|EJG43488.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2070335]
 gi|395586642|gb|EJG47009.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2070425]
 gi|395586964|gb|EJG47326.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2070531]
 gi|395594107|gb|EJG54347.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2072047]
 gi|395601499|gb|EJG61646.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2071004]
 gi|395606576|gb|EJG66680.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2081074]
 gi|395866703|gb|EJG77831.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae SPAR27]
 gi|395867267|gb|EJG78391.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae SPAR48]
 gi|395878913|gb|EJG89975.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA17301]
 gi|395885867|gb|EJG96888.1| GTP pyrophosphokinase [Streptococcus pneumoniae GA60190]
 gi|395893411|gb|EJH04398.1| GTP pyrophosphokinase [Streptococcus pneumoniae GA56113]
 gi|395899059|gb|EJH10003.1| GTP pyrophosphokinase [Streptococcus pneumoniae GA19998]
 gi|444249440|gb|ELU55931.1| GTP diphosphokinase [Streptococcus pneumoniae PCS8203]
 gi|444251182|gb|ELU57654.1| GTP diphosphokinase [Streptococcus pneumoniae PCS8106]
 gi|444274026|gb|ELU79681.1| GTP diphosphokinase [Streptococcus pneumoniae PNI0153]
 gi|444280088|gb|ELU85464.1| GTP diphosphokinase [Streptococcus pneumoniae PNI0076]
 gi|444281669|gb|ELU86977.1| GTP diphosphokinase [Streptococcus pneumoniae PNI0199]
 gi|444288643|gb|ELU93534.1| GTP diphosphokinase [Streptococcus pneumoniae PNI0446]
          Length = 740

 Score =  331 bits (849), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 190/494 (38%), Positives = 290/494 (58%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YL+  ++  V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD  ++A G 
Sbjct: 16  TKEYLTEEDVHFVHKALVYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT+  T + +E EFG  VR IV+G   V+KLGK++ K    S+++  A++ R+M
Sbjct: 76  LHDVVEDTDA-TLDDLEREFGPDVRMIVDG---VTKLGKVEYK----SIEEQLAENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM+E++RVI+VKL+DRLHNMRTL H+   KQ  I+ ET++++APLA  LG+  +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISKETMEIYAPLAHRLGISSVKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y N  ++ K+   + +  +E E  ++E    ++ K+E  ++     +K +I   
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLE--EYTTERHLKGKIYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSI++ +   R    E+  +  +R I+              Q   Y +LG VH  W
Sbjct: 242 PKHIYSIFRKMQDKRKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHEFW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA  K NGYQS+HTT    +Y     +E QIRT+EM  +AE G+AAH++ 
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  + G V                 N+   A+ ++W+  + E Q++      ++EFVD++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDSV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             + L   ++VFTP G +++LPK +  +D+AY IHT++G K   AKVNG +V  T  L  
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445

Query: 617 AEVVEIITYNVSFS 630
            + VEII    SF 
Sbjct: 446 GDQVEIIANPNSFG 459


>gi|284928658|ref|YP_003421180.1| (p)ppGpp synthetase, RelA/SpoT family [cyanobacterium UCYN-A]
 gi|284809117|gb|ADB94822.1| (p)ppGpp synthetase, RelA/SpoT family [cyanobacterium UCYN-A]
          Length = 745

 Score =  331 bits (849), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 194/478 (40%), Positives = 278/478 (58%), Gaps = 47/478 (9%)

Query: 147 ELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNV 206
           +L+  A   A++ H GQ R+SGEP+I+HPV VA IL +L  D   IAAG LHD VEDT++
Sbjct: 37  DLICHAFDFAYQLHKGQYRKSGEPYIVHPVTVAGILRDLGGDKSMIAAGFLHDVVEDTDI 96

Query: 207 VTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRV 266
            T + IEE FG  VR +VEG TK+SK      K E       +A++ R+MFLAM +++RV
Sbjct: 97  -TADNIEEMFGQEVRLLVEGVTKLSKFN-FSNKTEQ------QAENFRRMFLAMAKDIRV 148

Query: 267 IIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNA 326
           I+VKLADRLHNMRTL  + P KQ  IA ET ++F+PLA  LG++++K ELE+LSF Y   
Sbjct: 149 IVVKLADRLHNMRTLDALKPEKQKRIALETKEIFSPLANRLGIWRVKWELEDLSFKYLET 208

Query: 327 EDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKA 386
             Y +++  VA+   + E  +E    IL K++     + +  ++ + RS  K  Y IY  
Sbjct: 209 NAYWEIQGLVAEKRIDREARIENVKNILQKRLNS---IGIQVLELQGRS--KHLYGIYYK 263

Query: 387 VLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDY 446
           +       +E+  +A LRII++ K            + CY  L +VH  + P+P   KDY
Sbjct: 264 MHSQNKGFHEIYDLAALRIIVQNK------------EECYRALAVVHDTFKPMPGRFKDY 311

Query: 447 IATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGH 506
           I  PKPN YQSLHTT++ F   +   LE+QIRT EM  IAE GIAAH+  +   TG+  +
Sbjct: 312 IGLPKPNRYQSLHTTVVGF---NGRPLEIQIRTLEMHHIAEYGIAAHWKYK--ETGVSHY 366

Query: 507 ARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSRVF 566
            + +                  + +WL  + +WQ++      ++E+VD +  +L    V+
Sbjct: 367 TQLSQEDE--------------KFTWLRQLLDWQKDL---KDAQEYVDNLKDNLFDDDVY 409

Query: 567 VFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
           VFTP G++  L +GAT VD+AY IHTE+GN M  A++NG        L N ++VEIIT
Sbjct: 410 VFTPDGDVIALARGATTVDFAYRIHTEVGNHMKGARINGKWSVFGQPLHNGDIVEIIT 467


>gi|422881371|ref|ZP_16927827.1| GTP diphosphokinase [Streptococcus sanguinis SK355]
 gi|332364552|gb|EGJ42323.1| GTP diphosphokinase [Streptococcus sanguinis SK355]
          Length = 739

 Score =  331 bits (849), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 189/494 (38%), Positives = 289/494 (58%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YL+  ++  +++AL+ A + H GQ RRSGEP+I+HP++VA IL  L+LD  ++A G 
Sbjct: 16  TRKYLAAEDVAFIQKALIYAIDCHSGQFRRSGEPYIVHPIQVAGILATLKLDAVTVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT   T + +E EFG  VR IV+G   V+KLGK+K K+    +    A++ R+M
Sbjct: 76  LHDVVEDTRA-TLDDLEREFGTDVRVIVDG---VTKLGKVKYKSHEEQL----AENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM+E++RVI+VKLADRLHNMRTL H+   KQ  I+ ET++++APLA  LG+  +K EL
Sbjct: 128 LMAMSEDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISSVKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y N  ++ K+   + +  +E E  +EE    +++KIE   +     +  +I   
Sbjct: 188 EDLSFRYLNEVEFYKISHMMKEKRREREALVEE----VVQKIE--TYAGERNLHGKIYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSIY+ +   +   +E+  +  +R I+              Q   Y +LG +H +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFDEIYDLIAIRCIL------------DTQSDVYAMLGYIHELW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA  K NGYQS+HTT    +Y     +E QIRT+EM  +AE G+AAH++ 
Sbjct: 290 RPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  V G V                 ++   A+ ++W+  + E Q++   +  +++FVD++
Sbjct: 346 KKGVKGQV-----------------DSKESAIGMNWIKELMELQDQ---SNDAKDFVDSV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
               L   ++VFTP G +++LPK +  +D+AY IHT++G K   AKVNG +V  T  L  
Sbjct: 386 KESYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLRT 445

Query: 617 AEVVEIITYNVSFS 630
            + VEIIT   SF 
Sbjct: 446 GDQVEIITNANSFG 459


>gi|417793474|ref|ZP_12440750.1| GTP diphosphokinase [Streptococcus oralis SK255]
 gi|334272884|gb|EGL91238.1| GTP diphosphokinase [Streptococcus oralis SK255]
          Length = 738

 Score =  331 bits (849), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 189/494 (38%), Positives = 293/494 (59%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YL+  ++  V++AL+ A + H GQ R+SGEP+IIHP++VA IL +L+LD  ++A G 
Sbjct: 16  TREYLTKEDVAFVQKALIYAVDCHSGQFRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT+  T + +E EFG  VR IV+G   V+KLGK++ K    S+++  A++ R+M
Sbjct: 76  LHDVVEDTDA-TLDDLEREFGHDVRIIVDG---VTKLGKVEYK----SLEEQLAENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM+E++RVI+VKL+DRLHNMRTL H+   KQ  I+ ET++++APLA  LG+  +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISSVKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y N  ++ K+   + +  +E E  ++E    ++ K+E  ++     +K +I   
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLE--EYTSERNLKGKIYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSIY+ +   +    E+  +  +R I+              Q   Y +LG VH +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHELW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA  K NGYQS+HTT    +Y     +E QIRT+EM  +AE G+AAH++ 
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  + G V                 N+   A+ ++W+  + E Q++      ++EFVD++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDSV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             + L   ++VFTP G +++LPK +  +D+AY IHT++G K   AKVNG +V  T  L  
Sbjct: 386 KEEYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445

Query: 617 AEVVEIITYNVSFS 630
            + VEI+T   SF 
Sbjct: 446 GDQVEIVTNPNSFG 459


>gi|365873417|ref|ZP_09412950.1| (p)ppGpp synthetase, RelA/SpoT family [Thermanaerovibrio velox DSM
           12556]
 gi|363983504|gb|EHM09711.1| (p)ppGpp synthetase, RelA/SpoT family [Thermanaerovibrio velox DSM
           12556]
          Length = 760

 Score =  331 bits (849), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 193/485 (39%), Positives = 287/485 (59%), Gaps = 53/485 (10%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y+   +L  +  AL+ A  AH  Q+R SGEP+++H + VA IL ++ELD +++ A LLHD
Sbjct: 54  YMDRQDLMKLGEALVFAANAHRDQRRHSGEPYVVHSISVAAILADMELDVDTLCAALLHD 113

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            +EDT +   E ++  FG  V  +V+G   V+KLGKL  K    S++D +A++LR+MFL 
Sbjct: 114 VLEDTEIGK-EEMQSRFGEDVVTMVDG---VTKLGKLAFK----SMEDYQAENLRKMFLV 165

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M +++RV+++KLADRLHNMRTL      KQ +IA ETL+++APLA  LG+Y +K ELE+L
Sbjct: 166 MAKDIRVVLIKLADRLHNMRTLQAHRRDKQITIAKETLEIYAPLAHRLGIYNVKRELEDL 225

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
            F     E Y +++RRV     E E  +++A  +L +K++++       ++  +    K 
Sbjct: 226 CFKILEPEIYYEIRRRVRKKLPEREAIIKQALDVLQQKLKEE------GIEASLSGRPKH 279

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIY+ + +   S+ ++  +  LR++        VG +      CY VLGLVH IW PI
Sbjct: 280 FYSIYEKMRRKNLSLEQLYDLLALRVV--------VGTVAE----CYQVLGLVHTIWKPI 327

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P    DYIA PK N YQSLHTT+   L  S   LEVQIRT EM  +AE GIAAH+     
Sbjct: 328 PGQFDDYIANPKSNMYQSLHTTV---LGPSGEPLEVQIRTWEMHWLAEYGIAAHW----- 379

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
                 H +   R             I  ++SW+  + E Q+E     +  EF+D +  D
Sbjct: 380 ------HYKEGKR---------RVDQIDQKLSWIRQVLESQQEG----SPSEFLDNLKTD 420

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           +L S V VFTP+G++ +LP G+T +D+AY IHTE+G+K V A VNG +V   + L+N ++
Sbjct: 421 VLTSEVLVFTPKGDVVSLPNGSTPIDFAYAIHTEVGHKCVGAMVNGRIVPMDYKLSNGDI 480

Query: 620 VEIIT 624
           V ++T
Sbjct: 481 VRVLT 485


>gi|304440364|ref|ZP_07400253.1| GTP diphosphokinase [Peptoniphilus duerdenii ATCC BAA-1640]
 gi|304371116|gb|EFM24733.1| GTP diphosphokinase [Peptoniphilus duerdenii ATCC BAA-1640]
          Length = 713

 Score =  331 bits (849), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 194/486 (39%), Positives = 289/486 (59%), Gaps = 52/486 (10%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           SY    +L+L++ A  LA + H GQKR SGE +IIHP  VA IL ++ +D  +I AGLLH
Sbjct: 11  SYNEHADLDLIKEAFDLAEKHHKGQKRNSGEDYIIHPFNVALILADMNMDTPTIVAGLLH 70

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT+V T+E I+EEFG  +  +V+G TK+ KL   K K EN      +A+++R+M L
Sbjct: 71  DVVEDTDV-TYEDIKEEFGQEIADLVDGVTKLKKLN-YKTKKEN------QAENIRKMVL 122

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM +++RVIIVKLADR HNMRTL +M P K+   A ET++++AP+A  LGM ++K ELE+
Sbjct: 123 AMAKDIRVIIVKLADRTHNMRTLEYMTPEKKIEKANETIEIYAPIADRLGMSKVKWELED 182

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
           LS  Y + ++Y K    + D+  +   E E+  K L+ +I+ +  ++   +K +I    K
Sbjct: 183 LSLRYLDPDNYYK----LVDMVNKRRNEREDLIKKLIDEIKAE--VEKAGIKADIHGRPK 236

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIYK ++  + S +E+  +  +R+            L    + CY VLG VH ++ P
Sbjct: 237 NFYSIYKKMIIKKKSFDEIYDLQAVRV------------LVDTVKDCYGVLGAVHNLYKP 284

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           IP   KDYIA PK N YQSLHTT+I    E+    EVQIRT EM   AE GIAAH+    
Sbjct: 285 IPGRFKDYIAMPKSNNYQSLHTTVIDSNGET---FEVQIRTYEMHQTAEYGIAAHW---- 337

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                           + K+    + +    ++WL  + EWQ++      + +F++T+  
Sbjct: 338 ----------------KYKSGATKSTSFDENLTWLRQLLEWQKDV---NDADDFMETLKI 378

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           D     VFVFTP G++ NLP+G+T +D+AY IH+++GN  V AK++G +V  T+ L + +
Sbjct: 379 DFFADEVFVFTPNGDVVNLPEGSTPIDFAYRIHSQVGNTCVGAKISGRIVPLTYKLKSGD 438

Query: 619 VVEIIT 624
           +V +IT
Sbjct: 439 IVSVIT 444


>gi|421299106|ref|ZP_15749793.1| bifunctional (P)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA60080]
 gi|395900577|gb|EJH11515.1| bifunctional (P)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA60080]
          Length = 740

 Score =  331 bits (849), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 191/494 (38%), Positives = 290/494 (58%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YL+  ++  V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD  ++A G 
Sbjct: 16  TKEYLTEEDVHFVHKALVYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT+  T + +E EFG  VR IV+G   V+KLGK++ K    S+++  A++ R+M
Sbjct: 76  LHDVVEDTDA-TLDDLEREFGPDVRVIVDG---VTKLGKVEYK----SIEEQLAENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM+E++RVI+VKL+DRLHNMRTL H+   KQ  I+ ET++++APLA  LG+  +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISKETMEIYAPLAHRLGISSVKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y N  ++ KV   + +  +E E  ++E    ++ K+E  ++     +K +I   
Sbjct: 188 EDLSFRYLNPTEFYKVTHMMKEKRREREALVDE----VVTKLE--EYTTERHLKGKIYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSI++ +   R    E+  +  +R I+              Q   Y +LG VH  W
Sbjct: 242 PKHIYSIFRKMQDKRKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHEFW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA  K NGYQS+HTT    +Y     +E QIRT+EM  +AE G+AAH++ 
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  + G V                 N+   A+ ++W+  + E Q++      ++EFVD++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDSV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             + L   ++VFTP G +++LPK +  +D+AY IHT++G K   AKVNG +V  T  L  
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445

Query: 617 AEVVEIITYNVSFS 630
            + VEII    SF 
Sbjct: 446 GDQVEIIANPNSFG 459


>gi|419766493|ref|ZP_14292690.1| RelA/SpoT family protein [Streptococcus mitis SK579]
 gi|383354062|gb|EID31645.1| RelA/SpoT family protein [Streptococcus mitis SK579]
          Length = 740

 Score =  331 bits (848), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 190/494 (38%), Positives = 291/494 (58%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YL+  ++  V +AL+ A + H GQ R+SGEP+IIHP++VA IL +L+LD  ++A G 
Sbjct: 16  TKEYLTEEDVHFVHKALVYAVDCHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT+  T + +E EFG  VR IV+G   V+KLGK++ K    S+++  A++ R+M
Sbjct: 76  LHDVVEDTDA-TLDDLEREFGPDVRVIVDG---VTKLGKVEYK----SIEEQLAENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM+E++RVI+VKL+DRLHNMRTL H+   KQ  I+ ET++++APLA  LG+  +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISKETMEIYAPLAHRLGISSVKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y N  ++ K+   + +  +E E  ++E    ++ K+ED  +     +K +I   
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREVLVDE----VVTKLED--YTTDRHLKGKIYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSI++ +   R    E+  +  +R I+              Q   Y +LG VH +W
Sbjct: 242 PKHIYSIFRKMQDKRKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHELW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA  K NGYQS+HTT    +Y     +E QIRT+ M  +AE G+AAH++ 
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKAMHEVAEYGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  + G V                 N+   A+ ++W+  + E Q++      ++EFVD++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDSV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             + L   ++VFTP G +++LPK +  +D+AY IHT++G K   AKVNG +V  T  L  
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445

Query: 617 AEVVEIITYNVSFS 630
            + VEIIT   SF 
Sbjct: 446 GDQVEIITNPNSFG 459


>gi|418149006|ref|ZP_12785768.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA13856]
 gi|419530670|ref|ZP_14070197.1| relA/SpoT family protein [Streptococcus pneumoniae GA40028]
 gi|353811342|gb|EHD91584.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA13856]
 gi|379573578|gb|EHZ38533.1| relA/SpoT family protein [Streptococcus pneumoniae GA40028]
          Length = 736

 Score =  331 bits (848), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 190/494 (38%), Positives = 290/494 (58%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YL+  ++  V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD  ++A G 
Sbjct: 12  TKEYLTEEDVHFVHKALVYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 71

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT+  T + +E EFG  VR IV+G   V+KLGK++ K    S+++  A++ R+M
Sbjct: 72  LHDVVEDTDA-TLDDLEREFGPDVRVIVDG---VTKLGKVEYK----SIEEQLAENHRKM 123

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM+E++RVI+VKL+DRLHNMRTL H+   KQ  I+ ET++++APLA  LG+  +K EL
Sbjct: 124 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISKETMEIYAPLAHRLGISSVKWEL 183

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y N  ++ K+   + +  +E E  ++E    ++ K+E  ++     +K +I   
Sbjct: 184 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLE--EYTTERHLKGKIYGR 237

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSI++ +   R    E+  +  +R I+              Q   Y +LG VH  W
Sbjct: 238 PKHIYSIFRKMQDKRKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHEFW 285

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA  K NGYQS+HTT    +Y     +E QIRT+EM  +AE G+AAH++ 
Sbjct: 286 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 341

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  + G V                 N+   A+ ++W+  + E Q++      ++EFVD++
Sbjct: 342 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDSV 381

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             + L   ++VFTP G +++LPK +  +D+AY IHT++G K   AKVNG +V  T  L  
Sbjct: 382 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 441

Query: 617 AEVVEIITYNVSFS 630
            + VEII    SF 
Sbjct: 442 GDQVEIIANPNSFG 455


>gi|168493546|ref|ZP_02717689.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
           [Streptococcus pneumoniae CDC3059-06]
 gi|418074466|ref|ZP_12711719.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA11184]
 gi|418079068|ref|ZP_12716290.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae 4027-06]
 gi|418081265|ref|ZP_12718475.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae 6735-05]
 gi|418089998|ref|ZP_12727152.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA43265]
 gi|418098963|ref|ZP_12736060.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae 6901-05]
 gi|418105743|ref|ZP_12742799.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA44500]
 gi|418115159|ref|ZP_12752145.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae 5787-06]
 gi|418117317|ref|ZP_12754286.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae 6963-05]
 gi|418134712|ref|ZP_12771569.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA11426]
 gi|418174032|ref|ZP_12810644.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA41277]
 gi|418217085|ref|ZP_12843765.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae Netherlands15B-37]
 gi|419432019|ref|ZP_13972152.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae EU-NP05]
 gi|419440826|ref|ZP_13980871.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA40410]
 gi|419464927|ref|ZP_14004818.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA04175]
 gi|419469444|ref|ZP_14009312.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA06083]
 gi|419498009|ref|ZP_14037716.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA47522]
 gi|419535100|ref|ZP_14074599.1| relA/SpoT family protein [Streptococcus pneumoniae GA17457]
 gi|421281631|ref|ZP_15732428.1| guanosine-3,5-bis(Diphosphate) 3-pyrophosphohydrolase
           [Streptococcus pneumoniae GA04672]
 gi|421310045|ref|ZP_15760670.1| guanosine-3,5-bis(Diphosphate) 3-pyrophosphohydrolase
           [Streptococcus pneumoniae GA62681]
 gi|183576480|gb|EDT97008.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
           [Streptococcus pneumoniae CDC3059-06]
 gi|353746595|gb|EHD27255.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae 4027-06]
 gi|353748535|gb|EHD29187.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA11184]
 gi|353752004|gb|EHD32635.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae 6735-05]
 gi|353761189|gb|EHD41761.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA43265]
 gi|353768945|gb|EHD49467.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae 6901-05]
 gi|353775919|gb|EHD56398.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA44500]
 gi|353785243|gb|EHD65662.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae 5787-06]
 gi|353787998|gb|EHD68396.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae 6963-05]
 gi|353837988|gb|EHE18069.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA41277]
 gi|353870358|gb|EHE50231.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae Netherlands15B-37]
 gi|353901949|gb|EHE77479.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA11426]
 gi|379536527|gb|EHZ01713.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA04175]
 gi|379544248|gb|EHZ09393.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA06083]
 gi|379563261|gb|EHZ28265.1| relA/SpoT family protein [Streptococcus pneumoniae GA17457]
 gi|379577896|gb|EHZ42813.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA40410]
 gi|379598842|gb|EHZ63627.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA47522]
 gi|379629100|gb|EHZ93701.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae EU-NP05]
 gi|395880896|gb|EJG91947.1| guanosine-3,5-bis(Diphosphate) 3-pyrophosphohydrolase
           [Streptococcus pneumoniae GA04672]
 gi|395909660|gb|EJH20535.1| guanosine-3,5-bis(Diphosphate) 3-pyrophosphohydrolase
           [Streptococcus pneumoniae GA62681]
          Length = 740

 Score =  331 bits (848), Expect = 8e-88,   Method: Compositional matrix adjust.
 Identities = 190/494 (38%), Positives = 290/494 (58%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YL+  ++  V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD  ++A G 
Sbjct: 16  TKEYLTEEDVHFVHKALIYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT+  T + +E EFG  VR IV+G   V+KLGK++ K    S+++  A++ R+M
Sbjct: 76  LHDVVEDTDA-TLDDLEREFGPDVRVIVDG---VTKLGKVEYK----SIEEQLAENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM+E++RVI+VKL+DRLHNMRTL H+   KQ  I+ ET++++APLA  LG+  +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISKETMEIYAPLAHRLGISSVKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y N  ++ K+   + +  +E E  ++E    ++ K+E  ++     +K +I   
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLE--EYTTERHLKGKIYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSI++ +   R    E+  +  +R I+              Q   Y +LG VH  W
Sbjct: 242 PKHIYSIFRKMQDKRKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHEFW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA  K NGYQS+HTT    +Y     +E QIRT+EM  +AE G+AAH++ 
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  + G V                 N+   A+ ++W+  + E Q++      ++EFVD++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDSV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             + L   ++VFTP G +++LPK +  +D+AY IHT++G K   AKVNG +V  T  L  
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445

Query: 617 AEVVEIITYNVSFS 630
            + VEII    SF 
Sbjct: 446 GDQVEIIANPNSFG 459


>gi|228475223|ref|ZP_04059949.1| GTP pyrophosphokinase [Staphylococcus hominis SK119]
 gi|314936253|ref|ZP_07843600.1| GTP diphosphokinase [Staphylococcus hominis subsp. hominis C80]
 gi|418618568|ref|ZP_13181433.1| GTP diphosphokinase [Staphylococcus hominis VCU122]
 gi|228270834|gb|EEK12236.1| GTP pyrophosphokinase [Staphylococcus hominis SK119]
 gi|313654872|gb|EFS18617.1| GTP diphosphokinase [Staphylococcus hominis subsp. hominis C80]
 gi|374827328|gb|EHR91191.1| GTP diphosphokinase [Staphylococcus hominis VCU122]
          Length = 729

 Score =  331 bits (848), Expect = 8e-88,   Method: Compositional matrix adjust.
 Identities = 189/498 (37%), Positives = 294/498 (59%), Gaps = 49/498 (9%)

Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
           E L    SYLS ++ + V ++  +A+EAH GQ R++G P+I+HP++VA IL E+ LD  +
Sbjct: 11  EVLNKAKSYLSADDYQYVLKSYHIAYEAHQGQFRKNGLPYIMHPIQVAGILTEMRLDGPT 70

Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
           I AG LHD +EDT   TFE ++  F   + RIV+G TK+ K+ K + K E       +A+
Sbjct: 71  IVAGFLHDVIEDT-PYTFEDVKNMFNEEIARIVDGVTKLKKV-KYRSKEEQ------QAE 122

Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
           + R++F+A+ ++VRVI+VKLADRLHNMRTL  M   KQ  I+ ETL+++APLA  LG+  
Sbjct: 123 NHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMAREKQIRISKETLEIYAPLAHRLGINT 182

Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
           IK ELE+++  Y ++  Y     R+ +L K+   E E   +  M KI+ +  ++ M ++ 
Sbjct: 183 IKWELEDIALRYIDSVQYF----RIVNLMKKKRSEREAYIQNAMDKIQTE--MNKMNIQG 236

Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
           EI    K  YSIY+ ++K +   +++  +  +R+I+            +    CY +LGL
Sbjct: 237 EISGRPKHIYSIYRKMVKQKKQFDQIFDLLAIRVIV------------NSINDCYAILGL 284

Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
           VH +W P+P   KDYIA PK N YQSLHTT++     +   LE+QIRT EM  IAE G+A
Sbjct: 285 VHTLWKPMPGRFKDYIAMPKQNMYQSLHTTVVG---PNGDPLEIQIRTFEMHEIAEHGVA 341

Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
           AH++ +                  GKT+     +   +++WL   +E  E    +  ++E
Sbjct: 342 AHWAYK-----------------EGKTINSKTQDFQNKLNWL---KELAETDHTSSDAQE 381

Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
           F++++  DL   +V+ FTP  ++  LP GA  +D+AY IH+E+GNKM+ AKVNG +V   
Sbjct: 382 FMESLKYDLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPID 441

Query: 612 HVLANAEVVEIITYNVSF 629
           ++L   +++EI T   S+
Sbjct: 442 YILKTGDIIEIRTSKHSY 459


>gi|172058098|ref|YP_001814558.1| (p)ppGpp synthetase I SpoT/RelA [Exiguobacterium sibiricum 255-15]
 gi|171990619|gb|ACB61541.1| (p)ppGpp synthetase I, SpoT/RelA [Exiguobacterium sibiricum 255-15]
          Length = 732

 Score =  331 bits (848), Expect = 8e-88,   Method: Compositional matrix adjust.
 Identities = 197/494 (39%), Positives = 288/494 (58%), Gaps = 54/494 (10%)

Query: 138 ISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLL 197
           + Y++  E++ + RA   A + H+GQ RRSGEP+IIHPV+VA IL ++ LD  +I A LL
Sbjct: 17  VEYMTEAEVKDIERAYQFAKDEHEGQFRRSGEPYIIHPVQVAGILVDIGLDATTIVAALL 76

Query: 198 HDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMF 257
           HD VEDT++ T E + E FGA V  +V+G   V+KLGK+K K++   +    A++ R+MF
Sbjct: 77  HDVVEDTDI-TLEELTERFGADVAMLVDG---VTKLGKIKYKSKREEL----AENHRKMF 128

Query: 258 LAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELE 317
           +AM E++RVI++KLADRLHNMRTL HM   KQ   A ETL++FAPLA  LG+  IK ELE
Sbjct: 129 IAMAEDIRVILIKLADRLHNMRTLQHMVKEKQVQKAEETLEIFAPLAHRLGISTIKWELE 188

Query: 318 NLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIED--DQFLDLMTVKTEIRS 375
           ++S  Y N + Y     R+  + K+   E E     L+  + D  ++ L+ + +  E+  
Sbjct: 189 DISLRYINPQQYY----RIVSMMKQKRTERE----ALVTSVIDEVNEVLEEVEIAAEVDG 240

Query: 376 VCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGI 435
             K  YSIY  +  S+   +E+  +  +RII+               + CY VLG++H  
Sbjct: 241 RPKHIYSIYNKMQNSKKEFSEIYDLMAVRIIV------------DSIKDCYAVLGIIHTQ 288

Query: 436 WTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYS 495
           + P+P   KDYIA PKPN YQSLHTT+I    E    LEVQIRT +M  IAE GIAAH+ 
Sbjct: 289 YKPMPGRFKDYIAMPKPNMYQSLHTTVIGPKGEP---LEVQIRTRDMHFIAEYGIAAHW- 344

Query: 496 GRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDT 555
                      A   G+    K+          +I+    I E Q++      + EF+++
Sbjct: 345 -----------AYKEGKEQEAKS------GFEDKIAHFREILELQKD---TADAEEFMES 384

Query: 556 ITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLA 615
           +  D     ++VFTP+G++  LPKG+  +DYAY IHTEIG++ + AKVNG +V   + L 
Sbjct: 385 VKVDFFSDMLYVFTPKGDVIELPKGSVPIDYAYRIHTEIGHRTIGAKVNGRMVPIDYKLK 444

Query: 616 NAEVVEIITYNVSF 629
             +++EI+T   S+
Sbjct: 445 TGDIIEIVTSKHSY 458


>gi|428770116|ref|YP_007161906.1| (p)ppGpp synthetase I SpoT/RelA [Cyanobacterium aponinum PCC 10605]
 gi|428684395|gb|AFZ53862.1| (p)ppGpp synthetase I, SpoT/RelA [Cyanobacterium aponinum PCC
           10605]
          Length = 751

 Score =  331 bits (848), Expect = 8e-88,   Method: Compositional matrix adjust.
 Identities = 193/482 (40%), Positives = 273/482 (56%), Gaps = 49/482 (10%)

Query: 148 LVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVV 207
           L+ RA   A+  H+GQ R+SGEP+I HP+ VA +L +L  D E IAAG LHD VEDT   
Sbjct: 39  LICRAFQFAYSLHEGQMRKSGEPYIAHPIAVAELLRDLGGDSEMIAAGFLHDVVEDT-PT 97

Query: 208 TFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVI 267
           T E IE  FG  VR++VE  TK+SK      K E       +A++ R+MF+AM +++RVI
Sbjct: 98  TPEDIEVMFGKNVRQLVEAVTKLSKFN-FSSKTER------QAENFRRMFIAMAQDIRVI 150

Query: 268 IVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAE 327
           +VKLADRLHNMRTL  +PP KQ  IA ET ++FAPLA  LG++  K ELE+LSF Y + E
Sbjct: 151 VVKLADRLHNMRTLDFLPPEKQRLIAEETKEIFAPLANRLGIWHFKWELEDLSFKYLHPE 210

Query: 328 DYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAV 387
            Y K+K  +A+   + E  +E     + +++E     +L     E++   K  Y IY  +
Sbjct: 211 AYNKIKNLIAERRTDREARIENVIDTINQRLE-----NLGIHPVEVKGRPKHLYGIYHKM 265

Query: 388 LKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYI 447
           ++ +    ++  IA +RII+            +    CY  L +VH  + PIP   KDYI
Sbjct: 266 MRQKKEFEQIYDIAAVRIIV------------NTNDECYRTLAVVHDAFRPIPGRFKDYI 313

Query: 448 ATPKPNGYQSLHTTLIPFLYESMFR-LEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGH 506
             PKPN YQSLHTT++     S  R LE+QIRT EM  +AE GIAAH+  +       GH
Sbjct: 314 GLPKPNLYQSLHTTVV----NSNGRPLEIQIRTLEMHYVAEYGIAAHWKYKE-----TGH 364

Query: 507 ARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSRVF 566
           +     S   +           + +WL  + +WQ++      ++E+VD +  +L    V+
Sbjct: 365 SNHRHLSSDDE-----------KFTWLRQLLDWQKDL---KDAQEYVDNLKENLFDDDVY 410

Query: 567 VFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITYN 626
            FTP G++  L +GAT VD+AY IH+E+GN M  A++N         L N ++VEIIT N
Sbjct: 411 AFTPNGDVIALARGATAVDFAYRIHSEVGNHMKGARINDKWSPLDQPLQNGDIVEIITAN 470

Query: 627 VS 628
            S
Sbjct: 471 NS 472


>gi|148984077|ref|ZP_01817372.1| GTP pyrophosphokinase [Streptococcus pneumoniae SP3-BS71]
 gi|148997693|ref|ZP_01825257.1| GTP pyrophosphokinase [Streptococcus pneumoniae SP11-BS70]
 gi|149001918|ref|ZP_01826872.1| GTP pyrophosphokinase [Streptococcus pneumoniae SP14-BS69]
 gi|149021265|ref|ZP_01835511.1| thiol peroxidase [Streptococcus pneumoniae SP23-BS72]
 gi|168483486|ref|ZP_02708438.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
           [Streptococcus pneumoniae CDC1873-00]
 gi|168487265|ref|ZP_02711773.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
           [Streptococcus pneumoniae CDC1087-00]
 gi|168491474|ref|ZP_02715617.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
           [Streptococcus pneumoniae CDC0288-04]
 gi|168575168|ref|ZP_02721131.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
           [Streptococcus pneumoniae MLV-016]
 gi|221232384|ref|YP_002511537.1| GTP pyrophosphokinase [Streptococcus pneumoniae ATCC 700669]
 gi|225855074|ref|YP_002736586.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
           [Streptococcus pneumoniae JJA]
 gi|225859401|ref|YP_002740911.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
           [Streptococcus pneumoniae 70585]
 gi|237649193|ref|ZP_04523445.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
           [Streptococcus pneumoniae CCRI 1974]
 gi|237822270|ref|ZP_04598115.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
           [Streptococcus pneumoniae CCRI 1974M2]
 gi|298230751|ref|ZP_06964432.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
           [Streptococcus pneumoniae str. Canada MDR_19F]
 gi|298254448|ref|ZP_06978034.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
           [Streptococcus pneumoniae str. Canada MDR_19A]
 gi|298503389|ref|YP_003725329.1| GTP diphosphokinase [Streptococcus pneumoniae TCH8431/19A]
 gi|307068272|ref|YP_003877238.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
           [Streptococcus pneumoniae AP200]
 gi|387757872|ref|YP_006064851.1| GTP pyrophosphokinase [Streptococcus pneumoniae OXC141]
 gi|410477019|ref|YP_006743778.1| GTP diphosphokinase [Streptococcus pneumoniae gamPNI0373]
 gi|415700108|ref|ZP_11457822.1| GTP pyrophosphokinase [Streptococcus pneumoniae 459-5]
 gi|417694521|ref|ZP_12343708.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA47901]
 gi|417696807|ref|ZP_12345985.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA47368]
 gi|417699029|ref|ZP_12348200.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA41317]
 gi|418083450|ref|ZP_12720647.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA44288]
 gi|418085638|ref|ZP_12722817.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA47281]
 gi|418092250|ref|ZP_12729390.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA44452]
 gi|418101106|ref|ZP_12738189.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae 7286-06]
 gi|418103334|ref|ZP_12740406.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae NP070]
 gi|418108073|ref|ZP_12745110.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA41410]
 gi|418110612|ref|ZP_12747631.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA49447]
 gi|418119093|ref|ZP_12756050.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA18523]
 gi|418121701|ref|ZP_12758644.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA44194]
 gi|418123968|ref|ZP_12760899.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA44378]
 gi|418128512|ref|ZP_12765405.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae NP170]
 gi|418137706|ref|ZP_12774544.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA11663]
 gi|418144591|ref|ZP_12781386.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA13494]
 gi|418151151|ref|ZP_12787897.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA14798]
 gi|418162690|ref|ZP_12799371.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA17328]
 gi|418169744|ref|ZP_12806385.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA19077]
 gi|418171783|ref|ZP_12808407.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA19451]
 gi|418176434|ref|ZP_12813025.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA41437]
 gi|418178690|ref|ZP_12815273.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA41565]
 gi|418183172|ref|ZP_12819730.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA43380]
 gi|418185395|ref|ZP_12821936.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA47283]
 gi|418194211|ref|ZP_12830700.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA47439]
 gi|418196305|ref|ZP_12832781.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA47688]
 gi|418219374|ref|ZP_12846039.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae NP127]
 gi|418221675|ref|ZP_12848328.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA47751]
 gi|418223847|ref|ZP_12850487.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae 5185-06]
 gi|418232644|ref|ZP_12859230.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA07228]
 gi|418237099|ref|ZP_12863665.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA19690]
 gi|418239172|ref|ZP_12865723.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae NorthCarolina6A-23]
 gi|419423425|ref|ZP_13963638.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA43264]
 gi|419425588|ref|ZP_13965784.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae 7533-05]
 gi|419427703|ref|ZP_13967884.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae 5652-06]
 gi|419429845|ref|ZP_13970009.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA11856]
 gi|419436441|ref|ZP_13976528.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae 8190-05]
 gi|419445153|ref|ZP_13985168.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA19923]
 gi|419447304|ref|ZP_13987309.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae 7879-04]
 gi|419449433|ref|ZP_13989429.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae 4075-00]
 gi|419450971|ref|ZP_13990957.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae EU-NP02]
 gi|419453803|ref|ZP_13993773.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae EU-NP03]
 gi|419458232|ref|ZP_13998174.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA02254]
 gi|419460455|ref|ZP_14000383.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA02270]
 gi|419462808|ref|ZP_14002711.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA02714]
 gi|419471531|ref|ZP_14011390.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA07914]
 gi|419473699|ref|ZP_14013548.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA13430]
 gi|419475975|ref|ZP_14015811.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA14688]
 gi|419482683|ref|ZP_14022470.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA40563]
 gi|419487120|ref|ZP_14026882.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA44128]
 gi|419489123|ref|ZP_14028872.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA44386]
 gi|419491545|ref|ZP_14031283.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA47179]
 gi|419495828|ref|ZP_14035545.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA47461]
 gi|419504382|ref|ZP_14044050.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA47760]
 gi|419506529|ref|ZP_14046190.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA49194]
 gi|419510910|ref|ZP_14050551.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae NP141]
 gi|419526363|ref|ZP_14065921.1| relA/SpoT family protein [Streptococcus pneumoniae GA14373]
 gi|419532845|ref|ZP_14072360.1| relA/SpoT family protein [Streptococcus pneumoniae GA47794]
 gi|421209412|ref|ZP_15666425.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2070005]
 gi|421211518|ref|ZP_15668500.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2070035]
 gi|421213581|ref|ZP_15670535.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2070108]
 gi|421215743|ref|ZP_15672664.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2070109]
 gi|421225474|ref|ZP_15682212.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2070768]
 gi|421232350|ref|ZP_15688991.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2080076]
 gi|421238974|ref|ZP_15695538.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2071247]
 gi|421241108|ref|ZP_15697653.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2080913]
 gi|421245484|ref|ZP_15701982.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2081685]
 gi|421249874|ref|ZP_15706331.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2082239]
 gi|421275360|ref|ZP_15726189.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA52612]
 gi|421287915|ref|ZP_15738678.1| bifunctional (P)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA58771]
 gi|421290206|ref|ZP_15740956.1| bifunctional (P)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA54354]
 gi|421302886|ref|ZP_15753550.1| bifunctional (P)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA17484]
 gi|421305598|ref|ZP_15756252.1| bifunctional (P)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA62331]
 gi|421307838|ref|ZP_15758480.1| bifunctional (P)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA60132]
 gi|421314520|ref|ZP_15765107.1| bifunctional (P)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA47562]
 gi|444387046|ref|ZP_21185072.1| GTP diphosphokinase [Streptococcus pneumoniae PCS125219]
 gi|444389255|ref|ZP_21187172.1| GTP diphosphokinase [Streptococcus pneumoniae PCS70012]
 gi|444393017|ref|ZP_21190678.1| GTP diphosphokinase [Streptococcus pneumoniae PCS81218]
 gi|444398095|ref|ZP_21195578.1| GTP diphosphokinase [Streptococcus pneumoniae PNI0006]
 gi|444399732|ref|ZP_21197168.1| GTP diphosphokinase [Streptococcus pneumoniae PNI0007]
 gi|444403009|ref|ZP_21200132.1| GTP diphosphokinase [Streptococcus pneumoniae PNI0008]
 gi|444405187|ref|ZP_21202105.1| GTP diphosphokinase [Streptococcus pneumoniae PNI0009]
 gi|444407712|ref|ZP_21204379.1| GTP diphosphokinase [Streptococcus pneumoniae PNI0010]
 gi|444416600|ref|ZP_21212688.1| GTP diphosphokinase [Streptococcus pneumoniae PNI0360]
 gi|444419906|ref|ZP_21215740.1| GTP diphosphokinase [Streptococcus pneumoniae PNI0427]
 gi|147756192|gb|EDK63234.1| GTP pyrophosphokinase [Streptococcus pneumoniae SP11-BS70]
 gi|147759727|gb|EDK66717.1| GTP pyrophosphokinase [Streptococcus pneumoniae SP14-BS69]
 gi|147923366|gb|EDK74479.1| GTP pyrophosphokinase [Streptococcus pneumoniae SP3-BS71]
 gi|147930366|gb|EDK81350.1| thiol peroxidase [Streptococcus pneumoniae SP23-BS72]
 gi|172043164|gb|EDT51210.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
           [Streptococcus pneumoniae CDC1873-00]
 gi|183569827|gb|EDT90355.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
           [Streptococcus pneumoniae CDC1087-00]
 gi|183574171|gb|EDT94699.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
           [Streptococcus pneumoniae CDC0288-04]
 gi|183578856|gb|EDT99384.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
           [Streptococcus pneumoniae MLV-016]
 gi|220674845|emb|CAR69420.1| GTP pyrophosphokinase [Streptococcus pneumoniae ATCC 700669]
 gi|225720921|gb|ACO16775.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
           [Streptococcus pneumoniae 70585]
 gi|225722569|gb|ACO18422.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
           [Streptococcus pneumoniae JJA]
 gi|298238984|gb|ADI70115.1| GTP diphosphokinase [Streptococcus pneumoniae TCH8431/19A]
 gi|301800461|emb|CBW33097.1| GTP pyrophosphokinase [Streptococcus pneumoniae OXC141]
 gi|306409809|gb|ADM85236.1| Guanosine polyphosphate pyrophosphohydrolase/synthetase
           [Streptococcus pneumoniae AP200]
 gi|332199675|gb|EGJ13750.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA41317]
 gi|332200205|gb|EGJ14278.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA47368]
 gi|332201070|gb|EGJ15141.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA47901]
 gi|353754670|gb|EHD35282.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA44288]
 gi|353756347|gb|EHD36948.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA47281]
 gi|353762950|gb|EHD43507.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA44452]
 gi|353770606|gb|EHD51118.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae 7286-06]
 gi|353774635|gb|EHD55122.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae NP070]
 gi|353778350|gb|EHD58818.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA41410]
 gi|353781233|gb|EHD61678.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA49447]
 gi|353791045|gb|EHD71426.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA18523]
 gi|353792537|gb|EHD72909.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA44194]
 gi|353795788|gb|EHD76134.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA44378]
 gi|353799011|gb|EHD79334.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae NP170]
 gi|353807057|gb|EHD87329.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA13494]
 gi|353814361|gb|EHD94587.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA14798]
 gi|353826752|gb|EHE06909.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA17328]
 gi|353833723|gb|EHE13831.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA19077]
 gi|353835520|gb|EHE15614.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA19451]
 gi|353840505|gb|EHE20569.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA41437]
 gi|353842749|gb|EHE22795.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA41565]
 gi|353848155|gb|EHE28172.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA43380]
 gi|353848679|gb|EHE28691.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA47283]
 gi|353857789|gb|EHE37751.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA47439]
 gi|353860316|gb|EHE40261.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA47688]
 gi|353873734|gb|EHE53593.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae NP127]
 gi|353874985|gb|EHE54839.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA47751]
 gi|353878645|gb|EHE58475.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae 5185-06]
 gi|353885957|gb|EHE65741.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA07228]
 gi|353891537|gb|EHE71291.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA19690]
 gi|353892163|gb|EHE71912.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae NorthCarolina6A-23]
 gi|353900661|gb|EHE76212.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA11663]
 gi|379529896|gb|EHY95137.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA02254]
 gi|379530240|gb|EHY95480.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA02714]
 gi|379530591|gb|EHY95830.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA02270]
 gi|379546247|gb|EHZ11386.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA07914]
 gi|379550023|gb|EHZ15125.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA11856]
 gi|379550863|gb|EHZ15959.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA13430]
 gi|379557003|gb|EHZ22050.1| relA/SpoT family protein [Streptococcus pneumoniae GA14373]
 gi|379558757|gb|EHZ23789.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA14688]
 gi|379572846|gb|EHZ37803.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA19923]
 gi|379579275|gb|EHZ44182.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA40563]
 gi|379585489|gb|EHZ50345.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA44128]
 gi|379585997|gb|EHZ50851.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA43264]
 gi|379586665|gb|EHZ51515.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA44386]
 gi|379592907|gb|EHZ57722.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA47179]
 gi|379593914|gb|EHZ58725.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA47461]
 gi|379605365|gb|EHZ70116.1| relA/SpoT family protein [Streptococcus pneumoniae GA47794]
 gi|379605770|gb|EHZ70520.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA47760]
 gi|379608443|gb|EHZ73189.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA49194]
 gi|379612880|gb|EHZ77595.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae 8190-05]
 gi|379614844|gb|EHZ79554.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae 7879-04]
 gi|379617896|gb|EHZ82576.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae 5652-06]
 gi|379619049|gb|EHZ83723.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae 7533-05]
 gi|379622051|gb|EHZ86687.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae 4075-00]
 gi|379622676|gb|EHZ87310.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae EU-NP02]
 gi|379625873|gb|EHZ90499.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae EU-NP03]
 gi|379631513|gb|EHZ96090.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae NP141]
 gi|381314804|gb|EIC55570.1| GTP pyrophosphokinase [Streptococcus pneumoniae 459-5]
 gi|395572626|gb|EJG33221.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2070035]
 gi|395573508|gb|EJG34098.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2070005]
 gi|395578812|gb|EJG39322.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2070108]
 gi|395579950|gb|EJG40445.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2070109]
 gi|395588961|gb|EJG49283.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2070768]
 gi|395594853|gb|EJG55088.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2080076]
 gi|395600617|gb|EJG60772.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2071247]
 gi|395607486|gb|EJG67583.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2080913]
 gi|395608011|gb|EJG68107.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2081685]
 gi|395613568|gb|EJG73596.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2082239]
 gi|395873324|gb|EJG84416.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA52612]
 gi|395886478|gb|EJG97494.1| bifunctional (P)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA58771]
 gi|395887891|gb|EJG98905.1| bifunctional (P)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA54354]
 gi|395901508|gb|EJH12444.1| bifunctional (P)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA17484]
 gi|395904556|gb|EJH15470.1| bifunctional (P)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA62331]
 gi|395907223|gb|EJH18117.1| bifunctional (P)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA60132]
 gi|395913205|gb|EJH24058.1| bifunctional (P)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA47562]
 gi|406369964|gb|AFS43654.1| GTP diphosphokinase [Streptococcus pneumoniae gamPNI0373]
 gi|429319837|emb|CCP33151.1| GTP pyrophosphokinase [Streptococcus pneumoniae SPN034183]
 gi|429321653|emb|CCP35125.1| GTP pyrophosphokinase [Streptococcus pneumoniae SPN994039]
 gi|429323474|emb|CCP31166.1| GTP pyrophosphokinase [Streptococcus pneumoniae SPN994038]
 gi|444254256|gb|ELU60702.1| GTP diphosphokinase [Streptococcus pneumoniae PCS125219]
 gi|444257855|gb|ELU64188.1| GTP diphosphokinase [Streptococcus pneumoniae PCS70012]
 gi|444260752|gb|ELU67060.1| GTP diphosphokinase [Streptococcus pneumoniae PNI0006]
 gi|444262604|gb|ELU68895.1| GTP diphosphokinase [Streptococcus pneumoniae PCS81218]
 gi|444265436|gb|ELU71445.1| GTP diphosphokinase [Streptococcus pneumoniae PNI0008]
 gi|444268296|gb|ELU74165.1| GTP diphosphokinase [Streptococcus pneumoniae PNI0007]
 gi|444271308|gb|ELU77059.1| GTP diphosphokinase [Streptococcus pneumoniae PNI0010]
 gi|444274968|gb|ELU80601.1| GTP diphosphokinase [Streptococcus pneumoniae PNI0009]
 gi|444285465|gb|ELU90524.1| GTP diphosphokinase [Streptococcus pneumoniae PNI0360]
 gi|444286011|gb|ELU91019.1| GTP diphosphokinase [Streptococcus pneumoniae PNI0427]
          Length = 740

 Score =  331 bits (848), Expect = 8e-88,   Method: Compositional matrix adjust.
 Identities = 190/494 (38%), Positives = 290/494 (58%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YL+  ++  V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD  ++A G 
Sbjct: 16  TKEYLTEEDVHFVHKALVYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT+  T + +E EFG  VR IV+G   V+KLGK++ K    S+++  A++ R+M
Sbjct: 76  LHDVVEDTDA-TLDDLEREFGPDVRVIVDG---VTKLGKVEYK----SIEEQLAENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM+E++RVI+VKL+DRLHNMRTL H+   KQ  I+ ET++++APLA  LG+  +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISKETMEIYAPLAHRLGISSVKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y N  ++ K+   + +  +E E  ++E    ++ K+E  ++     +K +I   
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLE--EYTTERHLKGKIYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSI++ +   R    E+  +  +R I+              Q   Y +LG VH  W
Sbjct: 242 PKHIYSIFRKMQDKRKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHEFW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA  K NGYQS+HTT    +Y     +E QIRT+EM  +AE G+AAH++ 
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  + G V                 N+   A+ ++W+  + E Q++      ++EFVD++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDSV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             + L   ++VFTP G +++LPK +  +D+AY IHT++G K   AKVNG +V  T  L  
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445

Query: 617 AEVVEIITYNVSFS 630
            + VEII    SF 
Sbjct: 446 GDQVEIIANPNSFG 459


>gi|421207077|ref|ZP_15664129.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2090008]
 gi|421292516|ref|ZP_15743250.1| bifunctional (P)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA56348]
 gi|421312453|ref|ZP_15763055.1| bifunctional (P)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA58981]
 gi|395574413|gb|EJG34991.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2090008]
 gi|395891823|gb|EJH02817.1| bifunctional (P)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA56348]
 gi|395909307|gb|EJH20183.1| bifunctional (P)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA58981]
          Length = 740

 Score =  331 bits (848), Expect = 8e-88,   Method: Compositional matrix adjust.
 Identities = 190/494 (38%), Positives = 290/494 (58%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YL+  ++  V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD  ++A G 
Sbjct: 16  TKEYLTEEDVHFVHKALVYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT+  T + +E EFG  VR IV+G   V+KLGK++ K    S+++  A++ R+M
Sbjct: 76  LHDVVEDTDA-TLDDLEREFGPDVRVIVDG---VTKLGKVEYK----SIEEQLAENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM+E++RVI+VKL+DRLHNMRTL H+   KQ  I+ ET++++APLA  LG+  +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISKETMEIYAPLAHRLGISSVKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y N  ++ K+   + +  +E E  ++E    ++ K+E  ++     +K +I   
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLE--EYTTERHLKGKIYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSI++ +   R    E+  +  +R I+              Q   Y +LG VH  W
Sbjct: 242 PKHIYSIFRKMQDKRKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHEFW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA  K NGYQS+HTT    +Y     +E QIRT+EM  +AE G+AAH++ 
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  + G V                 N+   A+ ++W+  + E Q++      ++EFVD++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDSV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             + L   ++VFTP G +++LPK +  +D+AY IHT++G K   AKVNG +V  T  L  
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445

Query: 617 AEVVEIITYNVSFS 630
            + VEII    SF 
Sbjct: 446 GDQVEIIANPNSFG 459


>gi|405760481|ref|YP_006701077.1| GTP pyrophosphokinase [Streptococcus pneumoniae SPNA45]
 gi|404277370|emb|CCM07883.1| GTP pyrophosphokinase [Streptococcus pneumoniae SPNA45]
          Length = 740

 Score =  331 bits (848), Expect = 8e-88,   Method: Compositional matrix adjust.
 Identities = 190/494 (38%), Positives = 290/494 (58%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YL+  ++  V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD  ++A G 
Sbjct: 16  TKEYLTEEDVHFVHKALVYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT+  T + +E EFG  VR IV+G   V+KLGK++ K    S+++  A++ R+M
Sbjct: 76  LHDVVEDTDA-TLDDLEREFGPDVRVIVDG---VTKLGKVEYK----SIEEQLAENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM+E++RVI+VKL+DRLHNMRTL H+   KQ  I+ ET++++APLA  LG+  +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISKETMEIYAPLAHRLGISSVKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y N  ++ K+   + +  +E E  ++E    ++ K+E  ++     +K +I   
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLE--EYTTERHLKGKIYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSI++ +   R    E+  +  +R I+              Q   Y +LG VH  W
Sbjct: 242 PKHIYSIFRKMQDKRKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHEFW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA  K NGYQS+HTT    +Y     +E QIRT+EM  +AE G+AAH++ 
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  + G V                 N+   A+ ++W+  + E Q++      ++EFVD++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDSV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             + L   ++VFTP G +++LPK +  +D+AY IHT++G K   AKVNG +V  T  L  
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445

Query: 617 AEVVEIITYNVSFS 630
            + VEII    SF 
Sbjct: 446 GDQVEIIANPNSFG 459


>gi|349611483|ref|ZP_08890718.1| hypothetical protein HMPREF1027_00145 [Lactobacillus sp. 7_1_47FAA]
 gi|348608576|gb|EGY58556.1| hypothetical protein HMPREF1027_00145 [Lactobacillus sp. 7_1_47FAA]
          Length = 750

 Score =  331 bits (848), Expect = 8e-88,   Method: Compositional matrix adjust.
 Identities = 198/485 (40%), Positives = 278/485 (57%), Gaps = 47/485 (9%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++   +  V +A   A +AH+GQ R SG+P+IIHP +VA  L  L LD +++AAG LHD
Sbjct: 19  YMNEEHVAFVEKAYAFAKDAHEGQFRESGQPYIIHPTQVAGTLASLGLDPDTVAAGYLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
           TVEDT  VT E I++EFG  V  IVEG TK+ K+      +E +      AD+ R+M +A
Sbjct: 79  TVEDT-PVTNEDIKKEFGKDVAFIVEGVTKLKKIKYKSKTHEEYL-----ADNHRKMLIA 132

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M +++RVI+VKLADRLHNM TL H+ P KQ  IA ETL ++APLA  LG+  IK ELE++
Sbjct: 133 MAKDLRVIMVKLADRLHNMHTLDHLRPDKQRRIADETLDIYAPLADRLGIGTIKWELEDM 192

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           S  Y N + Y ++   +     E E+ +  A   L   ++D      + +K EI    K 
Sbjct: 193 SLHYLNPQQYYRIVNLMQSKRSERERYISSAISTLKANLDD------LGIKYEIFGRPKH 246

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIYK ++      +E+  +  +R+I+K              + CY VLG VH  WTP+
Sbjct: 247 IYSIYKKMVNKHKEFSEIYDLLAVRVIVK------------TVRDCYAVLGAVHTKWTPM 294

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK NGYQSLHTT+I         LE+QIRTE+M  IAE G+AAH++ +  
Sbjct: 295 PGRFKDYIAVPKANGYQSLHTTIIG---PGGKPLEIQIRTEKMHQIAEYGVAAHWAYKEG 351

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
           V   V        +P  K           +I     I E Q+E      S EF++++  D
Sbjct: 352 VQTAV------TETPSSK-----------KIDMFREILELQDE---TKDSHEFMNSVKTD 391

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           +   RV+VFTP+G++  LPKG+  +D+ YMIH+E+G   V AKVN  +V   + L N +V
Sbjct: 392 IFSDRVYVFTPKGDVYELPKGSVPLDFGYMIHSEVGAHSVGAKVNDKIVPLDYQLKNGDV 451

Query: 620 VEIIT 624
           VE++T
Sbjct: 452 VEMLT 456


>gi|149006712|ref|ZP_01830398.1| GTP pyrophosphokinase [Streptococcus pneumoniae SP18-BS74]
 gi|417677371|ref|ZP_12326778.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA17545]
 gi|418112984|ref|ZP_12749984.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA41538]
 gi|418155629|ref|ZP_12792356.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA16242]
 gi|418226026|ref|ZP_12852654.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae NP112]
 gi|419467257|ref|ZP_14007138.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA05248]
 gi|419513035|ref|ZP_14052667.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA05578]
 gi|419517242|ref|ZP_14056858.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA02506]
 gi|421283781|ref|ZP_15734567.1| bifunctional (P)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA04216]
 gi|147761627|gb|EDK68591.1| GTP pyrophosphokinase [Streptococcus pneumoniae SP18-BS74]
 gi|332072812|gb|EGI83293.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA17545]
 gi|353783346|gb|EHD63775.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA41538]
 gi|353819878|gb|EHE00067.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA16242]
 gi|353881223|gb|EHE61037.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae NP112]
 gi|379543004|gb|EHZ08156.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA05248]
 gi|379634200|gb|EHZ98765.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA05578]
 gi|379639315|gb|EIA03859.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA02506]
 gi|395880467|gb|EJG91519.1| bifunctional (P)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA04216]
          Length = 740

 Score =  331 bits (848), Expect = 8e-88,   Method: Compositional matrix adjust.
 Identities = 190/494 (38%), Positives = 290/494 (58%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YL+  ++  V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD  ++A G 
Sbjct: 16  TKEYLTEEDVHFVHKALVYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT+  T + +E EFG  VR IV+G   V+KLGK++ K    S+++  A++ R+M
Sbjct: 76  LHDVVEDTDA-TLDDLEREFGPDVRVIVDG---VTKLGKVEYK----SIEEQLAENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM+E++RVI+VKL+DRLHNMRTL H+   KQ  I+ ET++++APLA  LG+  +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISKETMEIYAPLAHRLGISSVKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y N  ++ K+   + +  +E E  ++E    ++ K+E  ++     +K +I   
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLE--EYTTERHLKGKIYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSI++ +   R    E+  +  +R I+              Q   Y +LG VH  W
Sbjct: 242 PKHIYSIFRKMQDKRKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHEFW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA  K NGYQS+HTT    +Y     +E QIRT+EM  +AE G+AAH++ 
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  + G V                 N+   A+ ++W+  + E Q++      ++EFVD++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDSV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             + L   ++VFTP G +++LPK +  +D+AY IHT++G K   AKVNG +V  T  L  
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445

Query: 617 AEVVEIITYNVSFS 630
            + VEII    SF 
Sbjct: 446 GDQVEIIANPNSFG 459


>gi|55820243|ref|YP_138685.1| (p)ppGpp synthetase [Streptococcus thermophilus LMG 18311]
 gi|55736228|gb|AAV59870.1| (p)ppGpp synthetase [Streptococcus thermophilus LMG 18311]
          Length = 739

 Score =  331 bits (848), Expect = 9e-88,   Method: Compositional matrix adjust.
 Identities = 185/492 (37%), Positives = 293/492 (59%), Gaps = 49/492 (9%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           SY+S ++L+LV +A   A +AH  Q R+SGEP+IIHP++VA IL EL LD  ++A G LH
Sbjct: 18  SYMSADDLKLVEKAWHYATDAHSEQFRQSGEPYIIHPIQVAGILAELHLDAVTVACGFLH 77

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT   T + +E +FG  VR IV+G   V+KLGK++ K+    +    A++ R+M +
Sbjct: 78  DVVEDTEK-TLDDLEADFGTDVRNIVDG---VTKLGKVEYKSHEEQL----AENHRKMLM 129

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM++++RVI+VKLADRLHNMRTL H+   KQ  I+ ET++++APLA  LG+ +IK ELE+
Sbjct: 130 AMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELED 189

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
            +F Y N  ++ K+   + +  +E E  ++E    ++ KI+   +     +  ++    K
Sbjct: 190 TAFRYLNEVEFYKISHMMKEKRREREALVDE----IVYKIK--TYTAEQGLVGDVYGRPK 243

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSI++ +   +   +++  +  +R +++                 Y +LG +H +W P
Sbjct: 244 HIYSIFRKMRDKKKRFDQIYDLIAIRCVME------------THSDVYAMLGYIHELWRP 291

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PK NGYQS+HTT    +Y     +E+QIRT++M  +AE G+AAH++ + 
Sbjct: 292 MPGRFKDYIANPKSNGYQSIHTT----VYGPKGPIEIQIRTKKMHQVAEYGVAAHWAYKK 347

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
            + G V                 ++   AL ++W+  + E Q+    N  ++EFVD++  
Sbjct: 348 GIKGKV-----------------DSKESALGMNWIKDLVELQD--ASNGDAKEFVDSVKE 388

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           D+   R++VFTP+G+++ LPK +  +D+AY IHT++G K   AKVNG +V  T  L   +
Sbjct: 389 DIFSERIYVFTPKGDVQELPKDSGPIDFAYAIHTQVGEKATGAKVNGRMVPLTAKLKTGD 448

Query: 619 VVEIITYNVSFS 630
           VVEIIT   SF 
Sbjct: 449 VVEIITNAHSFG 460


>gi|113476259|ref|YP_722320.1| (p)ppGpp synthetase I SpoT/RelA [Trichodesmium erythraeum IMS101]
 gi|110167307|gb|ABG51847.1| (p)ppGpp synthetase I, SpoT/RelA [Trichodesmium erythraeum IMS101]
          Length = 750

 Score =  331 bits (848), Expect = 9e-88,   Method: Compositional matrix adjust.
 Identities = 199/484 (41%), Positives = 279/484 (57%), Gaps = 58/484 (11%)

Query: 148 LVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVV 207
           L+ RA   A++ H+GQ R+SGEP+I HPV VA +L  L  D   IAAGLLHD VEDT+V 
Sbjct: 42  LICRAFEFAYKLHEGQYRKSGEPYICHPVAVAGLLKYLGGDSTMIAAGLLHDIVEDTDV- 100

Query: 208 TFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVI 267
             E IEE+FG+ V  +VEG   V+KL K    N+     +++A++ R+MFLAM +++RVI
Sbjct: 101 KIEEIEEKFGSEVTLLVEG---VTKLSKFNFSNKT----ELQAENFRRMFLAMAKDIRVI 153

Query: 268 IVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAE 327
           +VKLADRLHNMRTL H+P HKQ S A ET ++FAPLA  LG+ +IK ELE+LSF Y    
Sbjct: 154 VVKLADRLHNMRTLQHLPSHKQLSKALETREIFAPLANRLGIGRIKWELEDLSFKYLEPN 213

Query: 328 DYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT-EIRSVCKEPYSIYKA 386
            Y +++  VAD   + E  L +  + L +K      LD + ++  +I    K  Y IY+ 
Sbjct: 214 AYREIQELVADKRVDREARLLKMTENLRQK------LDRLGIECYDISGRPKHLYGIYRK 267

Query: 387 VLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDY 446
           +   +   +EV  I+ LRII++ +            + CY  L +VH  + PIP   KDY
Sbjct: 268 MYLKQKEFHEVYDISGLRIIVEKR------------EDCYRTLAIVHDSYRPIPGRFKDY 315

Query: 447 IATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGH 506
           I  PKPN YQSLHT +I         +EVQIRT EM  +AE GIAAH+            
Sbjct: 316 IGLPKPNRYQSLHTGVIGITGRP---VEVQIRTVEMHHVAEYGIAAHW------------ 360

Query: 507 ARPNGRSPRGKTVCLNNANIAL-----RISWLNAIREWQEEFVGNMTSREFVDTITRDLL 561
                   + K    +N N+ +     + +WL  + EWQ +       RE+++TI  DL 
Sbjct: 361 --------KYKETGYSNTNVNITTEDEKFTWLRQLLEWQSDL---KDDREYLETIKGDLF 409

Query: 562 GSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVE 621
              V+ FTP+G++ +L  G+T +D+AY IHTE+GN    AKVN  +V     L N ++VE
Sbjct: 410 SEDVYAFTPKGDVISLKHGSTPIDFAYRIHTEVGNHCTGAKVNERIVPLDTPLKNGDIVE 469

Query: 622 IITY 625
           I+T+
Sbjct: 470 ILTH 473


>gi|392531693|ref|ZP_10278830.1| GTP pyrophosphokinase [Carnobacterium maltaromaticum ATCC 35586]
 gi|414083941|ref|YP_006992649.1| relA/SpoT family protein [Carnobacterium maltaromaticum LMA28]
 gi|412997525|emb|CCO11334.1| relA/SpoT family protein [Carnobacterium maltaromaticum LMA28]
          Length = 736

 Score =  331 bits (848), Expect = 9e-88,   Method: Compositional matrix adjust.
 Identities = 192/493 (38%), Positives = 292/493 (59%), Gaps = 49/493 (9%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T +Y++   +  V++A   A +AH+GQ R+SGE +IIHP++VA IL EL++D  ++A G 
Sbjct: 16  TSTYMNSEHVAFVKKACEYATKAHEGQFRKSGEEYIIHPIQVAAILAELKMDPATVATGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT + T E I +EF   V  +V+G   V+KLGK+K K    S ++ +A++ R+M
Sbjct: 76  LHDVVEDTEM-TLEDIAKEFSPEVAMLVDG---VTKLGKIKYK----SHEEQQAENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            LAM +++RVI+VKLADRLHN+RTL H    KQ  IA ETL+++APLA  LG+ +IK EL
Sbjct: 128 LLAMAQDLRVIMVKLADRLHNLRTLKHHRADKQRRIANETLEIYAPLAHRLGISRIKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+ S  Y N + Y ++   +    +E E  + ++    + KI++   +D + +K EI   
Sbjct: 188 EDTSLRYLNPQQYYRIVHLMNSKREEREAYIADS----IDKIQES--VDELKLKAEIYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSIY+ +   +   NE+  +  +R+++               + CY VLG +H  W
Sbjct: 242 PKHIYSIYRKMKDQKKQFNEIYDLLAIRVMV------------DSIKDCYAVLGAIHTRW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA PK N YQS+HTT+I         +EVQIRT EM  +AE G+AAH++ 
Sbjct: 290 KPMPGRFKDYIAMPKANMYQSIHTTVIGPRGNP---VEVQIRTFEMHEVAEFGVAAHWAY 346

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +                  G T  + N  +  ++SW   I E Q+E   N  S +F++++
Sbjct: 347 K-----------------EGITKKIENDAVGTKLSWFRDIIELQDE--ANDAS-DFMESV 386

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             D+   +V+VFTP+G++  LP GA  +D+A+ IHTEIGNK + AKVNG +V   + L N
Sbjct: 387 KEDIFKDKVYVFTPKGDVSELPSGAGPLDFAFNIHTEIGNKTIGAKVNGKIVPLNYKLKN 446

Query: 617 AEVVEIITYNVSF 629
            ++V+++T   SF
Sbjct: 447 GDIVDVMTSPNSF 459


>gi|417923789|ref|ZP_12567246.1| RelA/SpoT family protein [Streptococcus mitis SK569]
 gi|342836671|gb|EGU70882.1| RelA/SpoT family protein [Streptococcus mitis SK569]
          Length = 740

 Score =  331 bits (848), Expect = 9e-88,   Method: Compositional matrix adjust.
 Identities = 190/494 (38%), Positives = 291/494 (58%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YLS  ++  V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD  ++A G 
Sbjct: 16  TQKYLSKEDVAFVHKALVYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT+  T + +E EFG  VR IV+G   V+KLGK++ K    S+++  A++ R+M
Sbjct: 76  LHDVVEDTDA-TLDDLEREFGPDVRVIVDG---VTKLGKVEYK----SIEEQLAENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM+E++RVI+VKL+DRLHNMRTL H+   KQ  I+ ET++++APLA  LG+  +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISKETMEIYAPLAHRLGISSVKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y N  ++ K+   + +  +E E  ++E    ++ K+E+  +     +K +I   
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLEN--YTTDRHLKGKIYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSI++ +   R    E+  +  +R I+              Q   Y +LG VH +W
Sbjct: 242 PKHIYSIFRKMQDKRKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHELW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA  K NGYQS+HTT    +Y     +E QIRT+ M  +AE G+AAH++ 
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKAMHEVAEYGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  + G V                 N+   A+ ++W+  + E Q++      ++EFVD++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDSV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             + L   ++VFTP G +++LPK +  +D+AY IHT++G K   AKVNG +V  T  L  
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445

Query: 617 AEVVEIITYNVSFS 630
            + VEI+T   SF 
Sbjct: 446 GDQVEIVTNPNSFG 459


>gi|417687089|ref|ZP_12336363.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA41301]
 gi|418160348|ref|ZP_12797047.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA17227]
 gi|419521575|ref|ZP_14061170.1| relA/SpoT family protein [Streptococcus pneumoniae GA05245]
 gi|332073979|gb|EGI84457.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA41301]
 gi|353822081|gb|EHE02257.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA17227]
 gi|379538875|gb|EHZ04055.1| relA/SpoT family protein [Streptococcus pneumoniae GA05245]
          Length = 740

 Score =  331 bits (848), Expect = 9e-88,   Method: Compositional matrix adjust.
 Identities = 189/494 (38%), Positives = 290/494 (58%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YL+  ++  V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD  ++A G 
Sbjct: 16  TKEYLTEEDVHFVHKALVYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT+  T + +E EFG  VR IV+G   V+KLGK++ K    S+++  A++ R+M
Sbjct: 76  LHDVVEDTDA-TLDDLEREFGPDVRMIVDG---VTKLGKVEYK----SIEEQLAENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM+E++RVI+VKL+DRLHNMRTL H+   KQ  I+ ET++++APLA  LG+  +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISKETMEIYAPLAHRLGISSVKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y N  ++ K+   + +  +E E  ++E    ++ K+E  ++     +K +I   
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLE--EYTTERHLKGKIYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSI++ +   R    E+  +  +R I+              Q   Y +LG VH  W
Sbjct: 242 PKHIYSIFRKMQDKRKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHEFW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA  K NGYQS+HTT    +Y     +E QIRT+EM  +AE G+AAH++ 
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  + G V                 N+   A+ ++W+  + E Q++      ++EFVD++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDSV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             + L   ++VFTP G +++LPK +  +D+AY IHT++G K   AKVNG +V  T  L  
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445

Query: 617 AEVVEIITYNVSFS 630
            + VEI+    SF 
Sbjct: 446 GDQVEIVANPNSFG 459


>gi|303258573|ref|ZP_07344553.1| GTP pyrophosphokinase [Streptococcus pneumoniae SP-BS293]
 gi|303262660|ref|ZP_07348600.1| GTP pyrophosphokinase [Streptococcus pneumoniae SP14-BS292]
 gi|303263601|ref|ZP_07349523.1| GTP pyrophosphokinase [Streptococcus pneumoniae BS397]
 gi|303266361|ref|ZP_07352250.1| GTP pyrophosphokinase [Streptococcus pneumoniae BS457]
 gi|303268234|ref|ZP_07354032.1| GTP pyrophosphokinase [Streptococcus pneumoniae BS458]
 gi|418139970|ref|ZP_12776795.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA13338]
 gi|418181000|ref|ZP_12817569.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA41688]
 gi|418189879|ref|ZP_12826391.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA47373]
 gi|421296479|ref|ZP_15747188.1| GTP pyrophosphokinase [Streptococcus pneumoniae GA58581]
 gi|302636216|gb|EFL66711.1| GTP pyrophosphokinase [Streptococcus pneumoniae SP14-BS292]
 gi|302640074|gb|EFL70529.1| GTP pyrophosphokinase [Streptococcus pneumoniae SP-BS293]
 gi|302642185|gb|EFL72534.1| GTP pyrophosphokinase [Streptococcus pneumoniae BS458]
 gi|302644061|gb|EFL74319.1| GTP pyrophosphokinase [Streptococcus pneumoniae BS457]
 gi|302646639|gb|EFL76864.1| GTP pyrophosphokinase [Streptococcus pneumoniae BS397]
 gi|353843072|gb|EHE23117.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA41688]
 gi|353853606|gb|EHE33587.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA47373]
 gi|353904749|gb|EHE80199.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA13338]
 gi|395895352|gb|EJH06327.1| GTP pyrophosphokinase [Streptococcus pneumoniae GA58581]
          Length = 740

 Score =  331 bits (848), Expect = 9e-88,   Method: Compositional matrix adjust.
 Identities = 190/494 (38%), Positives = 290/494 (58%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YL+  ++  V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD  ++A G 
Sbjct: 16  TKEYLTEEDVHFVHKALVYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT+  T + +E EFG  VR IV+G   V+KLGK++ K    S+++  A++ R+M
Sbjct: 76  LHDVVEDTDA-TLDDLEREFGPDVRVIVDG---VTKLGKVEYK----SIEEQLAENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM+E++RVI+VKL+DRLHNMRTL H+   KQ  I+ ET++++APLA  LG+  +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISKETMEIYAPLAHRLGISSVKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y N  ++ K+   + +  +E E  ++E    ++ K+E  ++     +K +I   
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLE--EYTTERHLKGKIYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSI++ +   R    E+  +  +R I+              Q   Y +LG VH  W
Sbjct: 242 PKHIYSIFRKMQDKRKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHEFW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA  K NGYQS+HTT    +Y     +E QIRT+EM  +AE G+AAH++ 
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  + G V                 N+   A+ ++W+  + E Q++      ++EFVD++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDSV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             + L   ++VFTP G +++LPK +  +D+AY IHT++G K   AKVNG +V  T  L  
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445

Query: 617 AEVVEIITYNVSFS 630
            + VEII    SF 
Sbjct: 446 GDQVEIIANPNSFG 459


>gi|402833070|ref|ZP_10881692.1| GTP diphosphokinase [Selenomonas sp. CM52]
 gi|402281437|gb|EJU30072.1| GTP diphosphokinase [Selenomonas sp. CM52]
          Length = 740

 Score =  331 bits (848), Expect = 9e-88,   Method: Compositional matrix adjust.
 Identities = 193/491 (39%), Positives = 289/491 (58%), Gaps = 50/491 (10%)

Query: 134 LRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIA 193
           L    SY    + +L+RRA  LA  AH GQKR SGE +IIHP+ VA+IL +L++D  +I+
Sbjct: 13  LEAVKSYQPNADTDLIRRAYELADAAHKGQKRVSGEDYIIHPLAVAKILTDLQIDDITIS 72

Query: 194 AGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDL 253
           A +LHD VEDT   T + + E FG  V  +++G   V+KLG+++ K    S ++ + +  
Sbjct: 73  AAILHDVVEDTTH-TLDEMRELFGDEVAMLIDG---VTKLGRIQYK----SKEEQQLESY 124

Query: 254 RQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIK 313
           R+MFLAM +++RVI++KLADRLHNMRTL +M   KQ  IA ET++++APLA  LG+  +K
Sbjct: 125 RKMFLAMAKDIRVIMIKLADRLHNMRTLKYMREDKQKRIARETIEIYAPLANRLGISNVK 184

Query: 314 SELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEI 373
            ELE+L   Y + + Y  +   V    +E +  ++EA++ +++K+E+        +  EI
Sbjct: 185 WELEDLCLRYLDPKAYYDLVESVKQKRQERQAFIDEAHEQIVEKLEEAH------ITAEI 238

Query: 374 RSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVH 433
           R   K  YSIYK + + +  I+E+  ++ LR+            L    + CY VLG++H
Sbjct: 239 RGRAKHFYSIYKKMKRDQKDISEIYDLSALRV------------LVDSVKDCYGVLGIIH 286

Query: 434 GIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAH 493
            +W P+P   KDYIA PK NGYQSLHTT+I   Y     LE+QIRT  M  ++E G+AAH
Sbjct: 287 AMWKPLPGRFKDYIAMPKSNGYQSLHTTVICRGYP----LEIQIRTFAMHKVSEYGVAAH 342

Query: 494 YSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFV 553
           +             +  G+S  G T   +      ++SWL  +   Q E       RE+ 
Sbjct: 343 WK-----------YKEAGKSV-GATCEYDQ-----KMSWLRQMVSLQHELD---DPREYF 382

Query: 554 DTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHV 613
           + +  D+    VFVFTP+G++ +LPKG+  +D+AY IHTE+G+  V AKVNG +V   + 
Sbjct: 383 EALKVDVFSDEVFVFTPKGDVVDLPKGSIPIDFAYRIHTEVGHHCVGAKVNGKIVPLEYK 442

Query: 614 LANAEVVEIIT 624
           L N ++V IIT
Sbjct: 443 LKNGDIVSIIT 453


>gi|444394540|ref|ZP_21192091.1| GTP diphosphokinase [Streptococcus pneumoniae PNI0002]
 gi|444259782|gb|ELU66091.1| GTP diphosphokinase [Streptococcus pneumoniae PNI0002]
          Length = 740

 Score =  331 bits (848), Expect = 9e-88,   Method: Compositional matrix adjust.
 Identities = 190/494 (38%), Positives = 290/494 (58%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YL+  ++  V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD  ++A G 
Sbjct: 16  TKEYLTEEDVHFVHKALVYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT+  T + +E EFG  VR IV+G   V+KLGK++ K    S+++  A++ R+M
Sbjct: 76  LHDVVEDTDA-TLDDLEREFGPDVRVIVDG---VTKLGKVEYK----SIEEQLAENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM+E++RVI+VKL+DRLHNMRTL H+   KQ  I+ ET++++APLA  LG+  +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISKETMEIYAPLAHRLGISSVKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y N  ++ K+   + +  +E E  ++E    ++ K+E  ++     +K +I   
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLE--EYTTERHLKGKIYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSI++ +   R    E+  +  +R I+              Q   Y +LG VH  W
Sbjct: 242 PKHIYSIFRKMQDKRKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHEFW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA  K NGYQS+HTT    +Y     +E QIRT+EM  +AE G+AAH++ 
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  + G V                 N+   A+ ++W+  + E Q++      ++EFVD++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDSV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             + L   ++VFTP G +++LPK +  +D+AY IHT++G K   AKVNG +V  T  L  
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445

Query: 617 AEVVEIITYNVSFS 630
            + VEII    SF 
Sbjct: 446 GDQVEIIANPNSFG 459


>gi|419508740|ref|ZP_14048391.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA49542]
 gi|379610694|gb|EHZ75424.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA49542]
          Length = 740

 Score =  331 bits (848), Expect = 9e-88,   Method: Compositional matrix adjust.
 Identities = 190/494 (38%), Positives = 291/494 (58%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YL+  ++  V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD  ++A G 
Sbjct: 16  TKEYLTEEDVHFVHKALVYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT+  T + +E EFG  VR IV+G   V+KLGK++ K    S+++  A++ R+M
Sbjct: 76  LHDVVEDTDA-TLDDLEREFGPDVRMIVDG---VTKLGKVEYK----SIEEQLAENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM+E++RVI+VKL+DRLHNMRTL H+   KQ  I+ ET++++APLA  LG+  +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISKETMEIYAPLAHRLGISSVKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y N  ++ K+   + +  +E E  ++E    ++ K+E  ++     +K +I   
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLE--EYTTDRHLKGKIYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSI++ +   R    E+  +  +R I+              Q   Y +LG VH +W
Sbjct: 242 PKHIYSIFRKMQDKRKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHELW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA  K NGYQS+HTT    +Y     +E QIRT+ M  +AE G+AAH++ 
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKAMHEVAEYGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  V G V                 N+   A+ ++W+  + E Q++      ++EFVD++
Sbjct: 346 KKGVKGQV-----------------NSKESAIGMNWIKEMIELQDQ---ADDAKEFVDSV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             + L   ++VFTP G +++LPK +  +D+AY IHT++G K   AKVNG +V  T  L  
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445

Query: 617 AEVVEIITYNVSFS 630
            + VEI+T   SF 
Sbjct: 446 GDQVEIVTNPNSFG 459


>gi|304380769|ref|ZP_07363437.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|304340706|gb|EFM06638.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
          Length = 736

 Score =  330 bits (847), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 193/498 (38%), Positives = 291/498 (58%), Gaps = 49/498 (9%)

Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
           E L    SYLS +E E V ++  +A+EAH GQ R++G P+I+HP++VA IL E+ LD  +
Sbjct: 18  EVLHKAKSYLSADEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPT 77

Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
           I AG LHD +EDT   TFE ++E F   V RIV+G TK+ K+ K + K E       +A+
Sbjct: 78  IVAGFLHDVIEDTPY-TFEDVKEMFNEEVARIVDGVTKLKKV-KYRSKEEQ------QAE 129

Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
           + R++F+A+ ++VRVI+VKLADRLHNMRTL  MP  KQ  I+ ETL+++APLA  LG+  
Sbjct: 130 NHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIYAPLAHRLGINT 189

Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
           IK ELE+ +  Y +   Y     R+ +L K+   E E   +  + +I  +  +D M ++ 
Sbjct: 190 IKWELEDTALRYIDNVQYF----RIVNLMKKKRSEREAYIETAIDRIRTE--MDRMNIEG 243

Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
           +I    K  YSIY  ++K +   +++  +  +R+I+            +    CY +LGL
Sbjct: 244 DINGRPKHIYSIYWKMMKQKKQFDQIFDLLAIRVIV------------NSINDCYAILGL 291

Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
           VH +W P+P   KDYIA PK N YQSLHTT++     +   LE+QIRT +M  IAE G+A
Sbjct: 292 VHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVVG---PNGDPLEIQIRTFDMHEIAEHGVA 348

Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
           AH++ +                  GK V   +     +++WL   +E  E    +  ++E
Sbjct: 349 AHWAYK-----------------EGKKVSEKDQTYQNKLNWL---KELAEADHTSSDAQE 388

Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
           F++T+  DL   +V+ FTP  ++  LP GA  +D+AY IH+E+GNKM+ AKVNG +V   
Sbjct: 389 FMETLKYDLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPID 448

Query: 612 HVLANAEVVEIITYNVSF 629
           ++L   ++VEI T   S+
Sbjct: 449 YILQTGDIVEIRTSKHSY 466


>gi|116513948|ref|YP_812854.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
           [Lactobacillus delbrueckii subsp. bulgaricus ATCC
           BAA-365]
 gi|116093263|gb|ABJ58416.1| Guanosine polyphosphate pyrophosphohydrolase/synthetase
           [Lactobacillus delbrueckii subsp. bulgaricus ATCC
           BAA-365]
          Length = 754

 Score =  330 bits (847), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 199/486 (40%), Positives = 280/486 (57%), Gaps = 51/486 (10%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++ N+L  V  A   A  AH+GQ R SG+P+I+HP +VA  L  L LD +++AAG LHD
Sbjct: 19  YMTANQLAFVESAYQFAARAHEGQTRASGQPYIVHPTQVAGTLANLGLDPDTVAAGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
           TVEDT+ VT + I+E+FGA V  IV+G TK++K        E  S ++  A++ R+M +A
Sbjct: 79  TVEDTS-VTNDDIKEKFGADVAFIVDGVTKLNKY-------EYKSHKEFLAENHRKMLIA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSH-MPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           M +++RVI+VKLADRLHNM TL H + P KQ  IA ETL ++APLA  LG+  IK +LE+
Sbjct: 131 MAKDLRVILVKLADRLHNMHTLEHLLRPDKQRRIAAETLDIYAPLADRLGIGTIKWKLED 190

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
           +SF Y N E Y K+   +     E E  +++A   L         LD + +K +I    K
Sbjct: 191 MSFHYMNPEAYYKIVSMMDAKRSEREGYIKDAIDYLRGT------LDSLGIKYDISGRPK 244

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIYK ++    + NE+  +  +R+I+         P       CY VLG VH  W P
Sbjct: 245 HIYSIYKKMVNKHKNFNEIYDLLAVRVIV---------PTVKD---CYAVLGAVHTKWKP 292

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PK NGYQSLHTT+I         LE+QIRTEEM  +AE G+AAH++   
Sbjct: 293 MPGRFKDYIAMPKANGYQSLHTTIIG---PGGKPLEIQIRTEEMHKVAEYGVAAHWA--- 346

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                  + R N +    K         AL I      RE  E    +  + EF++ +  
Sbjct: 347 -------YKRGNFQGVDEKEGG------ALDIG-----REILELQKDSSDADEFMEAVHS 388

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           D+   +V+VFTP+GE+  LPKG+  +D+AY IHT++G+  + AKVN  LV   + L N +
Sbjct: 389 DIFADKVYVFTPKGEVYELPKGSVTLDFAYAIHTQVGDHAIGAKVNDKLVPLDYKLKNGD 448

Query: 619 VVEIIT 624
           VV+I+T
Sbjct: 449 VVDILT 454


>gi|255658298|ref|ZP_05403707.1| GTP diphosphokinase [Mitsuokella multacida DSM 20544]
 gi|260849615|gb|EEX69622.1| GTP diphosphokinase [Mitsuokella multacida DSM 20544]
          Length = 740

 Score =  330 bits (847), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 194/502 (38%), Positives = 290/502 (57%), Gaps = 50/502 (9%)

Query: 123 KEDSPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARIL 182
           KE  P  +   L    SY    +L+L+RRA  LA +AH GQ R SGE +IIHP+ VA+IL
Sbjct: 4   KEKEPVTIENILDAVKSYSPKADLDLIRRAYELARKAHAGQTRVSGEAYIIHPLHVAQIL 63

Query: 183 GELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNEN 242
            +L LD  +I+A LLHD VEDT + T ++++E FG  V  +++G   V+KLG+L+ K   
Sbjct: 64  TQLHLDDATISAALLHDVVEDT-IYTNDQMKEMFGDEVAMLIDG---VTKLGRLQYK--- 116

Query: 243 HSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAP 302
            S ++ + +  R+MFLAM +++RVI++KLADRLHNMRTL +M   KQ  IA ET++++AP
Sbjct: 117 -SKEEAQLESYRKMFLAMAKDIRVIMIKLADRLHNMRTLKYMREDKQKRIARETIEIYAP 175

Query: 303 LAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQ 362
           LA  LG+  IK ELE+L   Y   E Y  +   V    KE +  ++ + + + +K+ +  
Sbjct: 176 LANRLGISSIKWELEDLCLRYLEPEIYYDLVENVKQKRKERQTFIDTSIEQIKEKLAEAH 235

Query: 363 FLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQ 422
                 +K +I    K  YSIYK + +    ++E+  ++ +R+            L    
Sbjct: 236 ------IKADISGRAKHFYSIYKKMKRDNKELSEIYDLSAVRV------------LVDSV 277

Query: 423 QICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEM 482
           + CY VLG++H +W PIP   KDYIA PK NGYQSLHTT++   Y     LE+QIRT  M
Sbjct: 278 KDCYGVLGVIHAMWKPIPGRFKDYIAMPKSNGYQSLHTTVMTRGYP----LEIQIRTFAM 333

Query: 483 DLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEE 542
             ++E G+AAH+  +    G    A+  G              +  ++SWL  +   Q+E
Sbjct: 334 HQVSEYGVAAHWKYKEAGKG----AKATG-------------AVDQKMSWLRQMVNLQQE 376

Query: 543 FVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAK 602
                  +E+ + +  D+    VFVFTP+G++ +LPKG+  +D+AY IHTE+G+  V AK
Sbjct: 377 L---SDPKEYFEALKVDVFSDEVFVFTPKGDVVDLPKGSIPIDFAYRIHTEVGHHCVGAK 433

Query: 603 VNGNLVSPTHVLANAEVVEIIT 624
           VNG LV   + L N ++V +IT
Sbjct: 434 VNGKLVPLEYKLKNGDIVSVIT 455


>gi|421487778|ref|ZP_15935176.1| GTP diphosphokinase [Streptococcus oralis SK304]
 gi|400369740|gb|EJP22737.1| GTP diphosphokinase [Streptococcus oralis SK304]
          Length = 738

 Score =  330 bits (847), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 191/494 (38%), Positives = 291/494 (58%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YL+  ++  V++AL+ A + H GQ R+SGEP+IIHP++VA IL +L+LD  ++A G 
Sbjct: 16  TREYLTKEDVAFVQKALIYAVDCHSGQFRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT+  T + +E EFG  VR IV+G   V+KLGK++ K    S+++  A++ R+M
Sbjct: 76  LHDVVEDTDA-TLDDLEREFGHDVRIIVDG---VTKLGKVEYK----SLEEQLAENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +A++E++RVI+VKL+DRLHNMRTL H+   KQ  I+ ET++++APLA  LG+  +K EL
Sbjct: 128 LMAISEDIRVILVKLSDRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISSVKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y N  ++ K    +  L KE  +E E     ++ K+E  ++     +K +I   
Sbjct: 188 EDLSFRYLNPTEFYK----ITHLMKEKRREREALVDEVVTKLE--EYTSERNLKGKIYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSIY+ +   +    E+  +  +R I+              Q   Y +LG VH +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHELW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA  K NGYQS+HTT    +Y     +E QIRT+EM  +AE G+AAH++ 
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  + G V                 N+   A+ ++W+  + E Q++      ++EFVD++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDSV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             + L   ++VFTP G +++LPK +  +D+AY IHT++G K   AKVNG +V  T  L  
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445

Query: 617 AEVVEIITYNVSFS 630
            + VEIIT   SF 
Sbjct: 446 GDQVEIITNPNSFG 459


>gi|418096747|ref|ZP_12733858.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA16531]
 gi|418198472|ref|ZP_12834930.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA47778]
 gi|421273302|ref|ZP_15724142.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae SPAR55]
 gi|353768468|gb|EHD48992.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA16531]
 gi|353861582|gb|EHE41517.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA47778]
 gi|395873733|gb|EJG84823.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae SPAR55]
          Length = 600

 Score =  330 bits (847), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 190/494 (38%), Positives = 290/494 (58%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YL+  ++  V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD  ++A G 
Sbjct: 16  TKEYLTEEDVHFVHKALVYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT+  T + +E EFG  VR IV+G   V+KLGK++ K    S+++  A++ R+M
Sbjct: 76  LHDVVEDTDA-TLDDLEREFGPDVRVIVDG---VTKLGKVEYK----SIEEQLAENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM+E++RVI+VKL+DRLHNMRTL H+   KQ  I+ ET++++APLA  LG+  +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISKETMEIYAPLAHRLGISSVKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y N  ++ K+   + +  +E E  ++E    ++ K+E  ++     +K +I   
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLE--EYTTERHLKGKIYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSI++ +   R    E+  +  +R I+              Q   Y +LG VH  W
Sbjct: 242 PKHIYSIFRKMQDKRKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHEFW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA  K NGYQS+HTT    +Y     +E QIRT+EM  +AE G+AAH++ 
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  + G V                 N+   A+ ++W+  + E Q++      ++EFVD++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDSV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             + L   ++VFTP G +++LPK +  +D+AY IHT++G K   AKVNG +V  T  L  
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445

Query: 617 AEVVEIITYNVSFS 630
            + VEII    SF 
Sbjct: 446 GDQVEIIANPNSFG 459


>gi|162452118|ref|YP_001614485.1| GTP diphosphokinase [Sorangium cellulosum So ce56]
 gi|50403843|gb|AAT76675.1| pp(p)Gpp synthetase/hydrolase [Sorangium cellulosum So ce56]
 gi|161162700|emb|CAN94005.1| GTP diphosphokinase [Sorangium cellulosum So ce56]
          Length = 724

 Score =  330 bits (847), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 184/486 (37%), Positives = 279/486 (57%), Gaps = 50/486 (10%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           +Y    +++L+ RA   + +AH GQ R+SG+P+  HP  VA I+ EL+LD  S+ AGLLH
Sbjct: 13  TYQPAADVDLIARAYAYSSDAHKGQTRKSGDPYFSHPASVAAIITELKLDTASVCAGLLH 72

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT   T + IE  FG  V  +V+G TK+SK+          S +D +A++ R+M +
Sbjct: 73  DVVEDTLATTTD-IENSFGQEVAFLVDGVTKLSKINFA-------SKEDRQAENFRKMLV 124

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM  ++RV++VKL DRL NMRTL  M P  Q  IA ET++++APLA  LG+ + KSELE+
Sbjct: 125 AMARDIRVLLVKLCDRLDNMRTLEFMKPEAQDRIARETMEIYAPLANRLGIARFKSELED 184

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
           LSF Y   E ++ + ++V    KE +K + E +K+L  K+ +  F        ++    K
Sbjct: 185 LSFRYIEPEAWSDLSQKVKTTAKERDKYIHEVSKVLAGKLAEQGF------AVDVTGRAK 238

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSI++ +   +   ++V  +   R++++                CY  LG++H  WTP
Sbjct: 239 HLYSIWRKMQAQQCDFDQVYDVIAFRVLVESVAD------------CYATLGVIHSQWTP 286

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDY+A PKPN YQSLHTT+I    E   R+E+QIRT EM  +AE+GIAAH+  + 
Sbjct: 287 VPGRFKDYVALPKPNMYQSLHTTVIGPGRE---RIEIQIRTHEMHRVAEQGIAAHWKYKE 343

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
             +G        G  P+           A R  WL  + E+Q+E        EF++++  
Sbjct: 344 NNSG--------GIDPKD----------AARFGWLRQLMEFQKEL---KDPAEFLESVKV 382

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           DL    V+VFTP+G+++  P+G+T +D+AY IHT++G     A+VNG +V     L N +
Sbjct: 383 DLFQDEVYVFTPKGDVRVFPRGSTPIDFAYAIHTQVGEHCSGARVNGAIVPLRSKLRNGD 442

Query: 619 VVEIIT 624
           VVE++T
Sbjct: 443 VVEVMT 448


>gi|158522068|ref|YP_001529938.1| (p)ppGpp synthetase I SpoT/RelA [Desulfococcus oleovorans Hxd3]
 gi|158510894|gb|ABW67861.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfococcus oleovorans Hxd3]
          Length = 716

 Score =  330 bits (847), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 197/493 (39%), Positives = 287/493 (58%), Gaps = 53/493 (10%)

Query: 133 DLRPTISYLSPNE-LELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
           D+  T+   +P+   ++V RA + + + H+GQ R SGEP++ HP+EVA IL  + LD   
Sbjct: 6   DILETLQDHNPDAPTDIVERAYIYSAKVHEGQMRLSGEPYLSHPLEVAGILASMRLDSVC 65

Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
           +AAGLLHD +EDT+  T + I+E FG  V  IV+G TK+S L          S QD +A+
Sbjct: 66  VAAGLLHDVLEDTHA-TEKDIQEMFGDEVLHIVQGLTKISTL-------PYSSDQDRQAE 117

Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
            +R+M LAM +++RVI++KL DRLHNMRTL +    KQ  IA ETL ++AP+A  LG+Y 
Sbjct: 118 SIRKMILAMADDLRVILIKLVDRLHNMRTLKYHKDAKQKKIARETLDIYAPIALRLGIYW 177

Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
           IK+ELE+++F     E+ A +  R+     E EK +E     + +K+ ++       ++ 
Sbjct: 178 IKNELEDMAFRVLYPEENAFLASRIRTDDVEREKYIETVRDYIKEKLAEN------GLQG 231

Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
           E+    K  YSI++ + K    +NEV  I   RII+   P             CY  LG+
Sbjct: 232 EVVGRHKHFYSIFQKMKKQNLDLNEVYDIIAFRIILDTMPQ------------CYEALGI 279

Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
           +H +W P+ +  KDYIA PKPN YQSLHTT+     E   R+E+QIRT+EMD +A+ G+A
Sbjct: 280 IHSMWKPLAKKFKDYIAVPKPNLYQSLHTTVFGPFGE---RVEIQIRTKEMDRVAKSGVA 336

Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
           AH+       G        GR   GKT            +W+  + E QE+     TS E
Sbjct: 337 AHW-------GYKEGKDSTGRD--GKTY-----------AWIQNLVETQED---AETSGE 373

Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
           F++ +  DL    V VFTP G +++L +GAT VD+AY+IHTE+G++   AKVNG +V  +
Sbjct: 374 FLENVRLDLFSDEVHVFTPEGAVRSLARGATPVDFAYLIHTEVGHQCTGAKVNGRMVPLS 433

Query: 612 HVLANAEVVEIIT 624
           HVL+  ++VEIIT
Sbjct: 434 HVLSTGDIVEIIT 446


>gi|357639018|ref|ZP_09136891.1| RelA/SpoT family protein [Streptococcus urinalis 2285-97]
 gi|418417900|ref|ZP_12991092.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           urinalis FB127-CNA-2]
 gi|357587472|gb|EHJ56880.1| RelA/SpoT family protein [Streptococcus urinalis 2285-97]
 gi|410869430|gb|EKS17391.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           urinalis FB127-CNA-2]
          Length = 739

 Score =  330 bits (847), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 188/499 (37%), Positives = 299/499 (59%), Gaps = 49/499 (9%)

Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
           E L  T  Y++ +++  V++AL  A  AH  Q R+SGEP+IIHP++VA IL +L LD  +
Sbjct: 11  EVLDLTKKYMNESDVAFVKKALDYATAAHFYQARKSGEPYIIHPIQVAGILADLHLDAVT 70

Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
           +A G LHD VEDT++ T + IE +FG  VR IV+G   V+KLGK++ K+    +    A+
Sbjct: 71  VACGFLHDVVEDTDI-TLDDIELDFGKDVRDIVDG---VTKLGKVEYKSHEEQL----AE 122

Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
           + R+M +AM++++RVI+VKLADRLHNMRTL H+   KQ  I+ ET++++APLA  LG+ +
Sbjct: 123 NHRKMLMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISR 182

Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
           IK ELE+L+F Y N  ++ K+   +++  +E E  ++E    +++KI    + +   +  
Sbjct: 183 IKWELEDLAFRYLNEVEFYKISHLMSEKRREREALVDE----IVEKIT--TYTNEQGLYG 236

Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
           E+    K  YSIY+ +   +   +++  +  +R I+  +  S V          Y ++G 
Sbjct: 237 EVYGRPKHIYSIYRKMRDKKKRFDQIFDLIAIRCIM--ETASDV----------YAMVGY 284

Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
           +H +W P+P   KDYIA PK NGYQS+HTT    +Y     +E+QIRT++M  +AE G+A
Sbjct: 285 IHELWRPMPGRFKDYIAAPKANGYQSIHTT----VYGPKGPIEIQIRTKDMHAVAEYGVA 340

Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
           AH++ +  + G V                 N A   + ++W+N + E Q+    N  +++
Sbjct: 341 AHWAYKKGIKGKV-----------------NQAEQKVGMNWINELVELQD--ASNGDAKD 381

Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
           FVD++  ++   R++VFTP G ++ LPK +  +D+AY IHT++G K   AKVNG +V  T
Sbjct: 382 FVDSVKEEIFSERIYVFTPNGAVQELPKDSGPIDFAYAIHTQVGEKATGAKVNGRMVPLT 441

Query: 612 HVLANAEVVEIITYNVSFS 630
             L   +VVEI+T   SF 
Sbjct: 442 AKLKTGDVVEIVTNPNSFG 460


>gi|363899872|ref|ZP_09326379.1| hypothetical protein HMPREF9625_01039 [Oribacterium sp. ACB1]
 gi|395210307|ref|ZP_10399227.1| putative GTP diphosphokinase [Oribacterium sp. ACB8]
 gi|361957535|gb|EHL10843.1| hypothetical protein HMPREF9625_01039 [Oribacterium sp. ACB1]
 gi|394704597|gb|EJF12135.1| putative GTP diphosphokinase [Oribacterium sp. ACB8]
          Length = 755

 Score =  330 bits (847), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 197/506 (38%), Positives = 300/506 (59%), Gaps = 60/506 (11%)

Query: 127 PERLWEDLRPTISYLSPNE-LELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGEL 185
           PE L + L   +    P+E L ++ +A  +A E H  QKR+SGEP+IIHP+ VA IL +L
Sbjct: 20  PEELLQMLLENVRSYHPSEDLSMITKAYEVAKEQHKDQKRKSGEPYIIHPLCVAIILADL 79

Query: 186 ELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSV 245
           E+D E+IAAGLLHD VEDT + T + +E EF   V  +V+G TK+++L      N N   
Sbjct: 80  EMDKETIAAGLLHDVVEDTGM-TLKDLEAEFNPDVASLVDGVTKLTQL------NLNSDK 132

Query: 246 QDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAK 305
            +++A++LR+MF++M +++RVII+KLADRLHN+RTL +  P K+   A E+L++++PLA 
Sbjct: 133 VEMQAENLRKMFVSMAKDIRVIIIKLADRLHNLRTLEYQSPEKRKEKARESLEIYSPLAD 192

Query: 306 LLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLD 365
            LG+ +IK E+++LS  Y   E Y  +  +V   +K   +E +  N I+    E  + ++
Sbjct: 193 RLGISKIKIEMDDLSLKYLEPEVYYDLADKVH--FKREARE-DRINSIVE---EVREHIE 246

Query: 366 LMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQIC 425
              ++  I+   K  +SIYK ++    +I+++  +  +RII++              + C
Sbjct: 247 ESGIEANIKGRIKHFFSIYKKMVNQNKTIDQIYDLFAIRIIVE------------TVRDC 294

Query: 426 YHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTE 480
           Y VLG++H ++TPIP   KDYIA PKPN YQSLHTT+I     PF        E+QIRT 
Sbjct: 295 YAVLGVIHKMYTPIPGRFKDYIAMPKPNMYQSLHTTVIGRDGVPF--------EIQIRTY 346

Query: 481 EMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQ 540
           EM   AE GIAAH+           +    G + +     ++      ++ WL+ I EWQ
Sbjct: 347 EMHRTAEFGIAAHWK----------YKEQGGSNEKATETEMS------KMKWLHEILEWQ 390

Query: 541 EEFVGNMTSREFVDTITRD--LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKM 598
           ++      S+EF++ +  D  L    V+ FTP G++KNLP+G+T +D+AY IH+ +GNKM
Sbjct: 391 KD---ESDSKEFMNMVKSDLSLFNENVYCFTPTGDVKNLPQGSTPIDFAYSIHSAVGNKM 447

Query: 599 VAAKVNGNLVSPTHVLANAEVVEIIT 624
           V AKVN  LV   + L N + V+IIT
Sbjct: 448 VGAKVNDKLVPIEYQLQNGDRVDIIT 473


>gi|389815880|ref|ZP_10207128.1| GTP pyrophosphokinase [Planococcus antarcticus DSM 14505]
 gi|388465603|gb|EIM07919.1| GTP pyrophosphokinase [Planococcus antarcticus DSM 14505]
          Length = 730

 Score =  330 bits (847), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 189/502 (37%), Positives = 296/502 (58%), Gaps = 50/502 (9%)

Query: 129 RLWEDLRPTI-SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELEL 187
           R  ED+   + SY++ + ++ +++A  +A++AH GQ R+SGEP+I+HPV+VA IL EL++
Sbjct: 7   RTAEDVFEMVASYMNADHVKTIKKAYQVAYDAHMGQFRKSGEPYIVHPVQVAGILAELQM 66

Query: 188 DWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQD 247
           D  ++AAG LHD VEDT V + E I  +F   V  +V+G TK+SK+  L       S ++
Sbjct: 67  DPATVAAGFLHDVVEDTEV-SREDIVRDFDEEVAVLVDGVTKLSKIKYL-------SKEE 118

Query: 248 VKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLL 307
            +A++ R+MF+AM +++RVI++KLADRLHN+RTL +    KQ   A ETL++FAP+A  L
Sbjct: 119 QQAENHRKMFVAMAQDIRVILIKLADRLHNLRTLKYQSVEKQRIKANETLEIFAPIAHRL 178

Query: 308 GMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLM 367
           G+  IK ELE+ +  Y N + Y     R+ +L K+   E EE    +M +I     LD +
Sbjct: 179 GINTIKWELEDTALRYLNPQQYY----RIVNLMKKKRTEREEYLNNVMSEIRTQ--LDEV 232

Query: 368 TVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYH 427
            ++ ++    K  YSIY+ +       NE+  +  +RI ++              + CY 
Sbjct: 233 DIEADLFGRPKHIYSIYRKMAIQNKQFNEIYDLLAVRITVESI------------KDCYA 280

Query: 428 VLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAE 487
           VLG++H  W P+P   KDYIA PK N YQSLHTT+I    +    LEVQIRTEEM  IAE
Sbjct: 281 VLGIIHSTWKPMPGRFKDYIAMPKQNLYQSLHTTVIGPQGDP---LEVQIRTEEMHRIAE 337

Query: 488 RGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNM 547
            G+AAH++ +                  GKT+    +++  R+SW   I ++Q +   + 
Sbjct: 338 YGVAAHWAYK-----------------EGKTIDKPKSSVDSRLSWFREILDFQND---SD 377

Query: 548 TSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNL 607
            + EF++++  DL    V++F+P+G++  +P G+  +D+AY +H+EIGNK + AK+NG +
Sbjct: 378 NAEEFMESLKYDLFSDMVYIFSPKGDVIEMPAGSCPIDFAYRVHSEIGNKTIGAKINGKM 437

Query: 608 VSPTHVLANAEVVEIITYNVSF 629
                 L   ++VEI+T   SF
Sbjct: 438 APLDTELHTGDIVEILTSKQSF 459


>gi|418045100|ref|ZP_12683196.1| (p)ppGpp synthetase I, SpoT/RelA [Thermotoga maritima MSB8]
 gi|351678182|gb|EHA61329.1| (p)ppGpp synthetase I, SpoT/RelA [Thermotoga maritima MSB8]
          Length = 714

 Score =  330 bits (847), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 198/484 (40%), Positives = 280/484 (57%), Gaps = 52/484 (10%)

Query: 141 LSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDT 200
            +  E +L+ +A   A   H+GQKR SGEPFI HPVEV +IL  L +D  ++ A LLHD 
Sbjct: 26  FTREEKKLLIKAYEFARIVHEGQKRFSGEPFITHPVEVTKILAGLGVDVTTLVAALLHDV 85

Query: 201 VEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAM 260
           VED   V+ ++I++EFG  V RIV+G TKVS +     ++++      K + +++MF AM
Sbjct: 86  VEDGENVSLDQIKKEFGPEVARIVDGVTKVSNINAPIGRDQDSR---KKIETIQKMFFAM 142

Query: 261 TEEVRVIIVKLADRLHNMRTLSHMP-PHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
            E++RVI VKLADRLHNMRT+ ++  P K+   A ETL+++APLA  LG+Y IKSELE+L
Sbjct: 143 AEDMRVIFVKLADRLHNMRTIHYVQDPEKKRYKAYETLEIYAPLAHKLGIYSIKSELEDL 202

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           +F     E+Y K+K  VA+  KE EK   E   +L   +E+ +      +K  +    K 
Sbjct: 203 AFKVLYPEEYYKIKELVAEKRKEREKRTNEYISLLKSALEEHK------IKAIVEGRYKH 256

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSI++ + +      E+  +  LR+I+K                CY VLG+VH IW P+
Sbjct: 257 YYSIWRKMKEKGKKFEEIYDLIALRVIVKDVTT------------CYTVLGIVHNIWKPL 304

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK NGY+SLHTT+I    E    LE+QIR EEM   AE G+ AH+     
Sbjct: 305 PGRFKDYIAAPKSNGYRSLHTTVITGYGEP---LEIQIRDEEMHREAEYGLIAHW----- 356

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
               +   RP+ ++ +                W+  + +W++E     T  EF D I ++
Sbjct: 357 ----IYKERPDVKTAK---------------EWIERLLDWRKELAQGFT--EFED-IKKE 394

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           L    VFVFTP+G+I +LPKG+T +D+AY IHTEIG+    AKVNG +V   + L N +V
Sbjct: 395 LQMDEVFVFTPKGDILHLPKGSTPIDFAYAIHTEIGHHYSGAKVNGKIVPIDYQLKNGDV 454

Query: 620 VEII 623
           VEII
Sbjct: 455 VEII 458


>gi|343525499|ref|ZP_08762454.1| RelA/SpoT family protein [Streptococcus constellatus subsp.
           pharyngis SK1060 = CCUG 46377]
 gi|343395769|gb|EGV08307.1| RelA/SpoT family protein [Streptococcus constellatus subsp.
           pharyngis SK1060 = CCUG 46377]
          Length = 738

 Score =  330 bits (847), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 190/494 (38%), Positives = 291/494 (58%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YLS  ++ L+++AL  A + H GQ R+SGEP+IIHP++VA IL +L+LD  S+A G 
Sbjct: 16  TRKYLSSEDVTLIQKALFYAVDRHRGQFRQSGEPYIIHPIQVAGILAKLKLDAVSVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT   T + +E EFG  VR IV+G   V+KLGK+K  +    +    A++ R+M
Sbjct: 76  LHDVVEDT-AATLDDLEGEFGHDVRVIVDG---VTKLGKVKYMSHEEQL----AENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM++++RVI+VKLADRLHNMRTL H+   KQ  I+ ET++++APLA  LG+  +K EL
Sbjct: 128 LMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISSVKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+L+F Y N  ++ K    ++ L KE  +E E+    ++ KIE   +     +  +I   
Sbjct: 188 EDLAFRYLNPTEFYK----ISHLMKEKRREREDLVDEVVHKIE--TYASERNLHGQIYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSIY+ +   +   +E+  +  +R I+              Q   Y +LG +H +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFDEIYDLIAIRCIL------------DTQSDVYAMLGYIHELW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA  K NGYQS+HTT    +Y     +E QIRT+EM  +AE G+AAH++ 
Sbjct: 290 RPMPGRFKDYIANRKANGYQSIHTT----IYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  + G V                 ++   A+ ++W+  + E Q++   +  +++FVD++
Sbjct: 346 KKGIKGQV-----------------DSKESAIGMNWIKEMMELQDQ---SNDAQDFVDSV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             + L   ++VFTP G +++LPK +  +D+AY IHT++G K V AKVNG +V  T  L  
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKAVGAKVNGRMVPLTTKLKT 445

Query: 617 AEVVEIITYNVSFS 630
            + VEIIT + SF 
Sbjct: 446 GDQVEIITSSNSFG 459


>gi|335048883|ref|ZP_08541895.1| GTP diphosphokinase [Megasphaera sp. UPII 199-6]
 gi|333764666|gb|EGL42052.1| GTP diphosphokinase [Megasphaera sp. UPII 199-6]
          Length = 733

 Score =  330 bits (847), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 193/502 (38%), Positives = 290/502 (57%), Gaps = 52/502 (10%)

Query: 128 ERLWEDLRPTISYLSPNELEL-VRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELE 186
           E  ++ L  TI    P+  +  +++A +LA +AH  Q+R SGE +I+HP+ VA+IL +++
Sbjct: 8   EEKFQQLVATIHSYQPDAPDSDLQKAFLLAADAHKDQRRVSGEWYIVHPLAVAQILADMK 67

Query: 187 LDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQ 246
           +D  +I A LLHD VEDT  +  + IE+ FG  V  +V+G TK+++L       +  + +
Sbjct: 68  IDATTITASLLHDVVEDTAYM-LDDIEKLFGKEVAFLVDGVTKLNRL-------DYRTKE 119

Query: 247 DVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKL 306
           D + + +R+MFLAM ++VRV+++KLADRLHNMRTL  M   KQ  I+ ETL++FAPLA  
Sbjct: 120 DQQINSMRKMFLAMAKDVRVVVIKLADRLHNMRTLRFMRSDKQKRISQETLEIFAPLAHR 179

Query: 307 LGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDL 366
           LG++ IK ELE+LSF Y   + Y  +  ++       E+ + EA ++L K       L  
Sbjct: 180 LGIFNIKWELEDLSFRYLEPDKYYDLVDQMKQKRHVREEIVNEAIEVLRKA------LTA 233

Query: 367 MTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICY 426
             ++ EI    K  YSIYK + K    +++V  +  +RII+               Q CY
Sbjct: 234 SHIQFEINGRPKHFYSIYKKMKKDNRDLSQVYDLYAIRIIV------------DTVQDCY 281

Query: 427 HVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIA 486
            VLG+VH +W P+P   KDYIA PKPN YQSLHTT+I    +    +E+QIRT EM  +A
Sbjct: 282 GVLGIVHSLWKPLPYRFKDYIAMPKPNNYQSLHTTVIGTRGQP---VEIQIRTWEMHRVA 338

Query: 487 ERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGN 546
           E G+AAH+  +             GR+  G            ++ WL  + EWQ+     
Sbjct: 339 EYGVAAHWRYK------------EGRANAGAN------EFDEKMGWLRNLLEWQD----T 376

Query: 547 MTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGN 606
              REF++ +  D     VFVFTPRG++ +LP+G+  +D+AY IHT++G++ V AK+NG 
Sbjct: 377 TNPREFMNALKLDAFSDEVFVFTPRGDVIDLPQGSIPIDFAYRIHTDVGHRCVGAKINGK 436

Query: 607 LVSPTHVLANAEVVEIITYNVS 628
           +V   + L N ++VEIIT  V 
Sbjct: 437 IVPLDYPLKNGDIVEIITSKVG 458


>gi|307707018|ref|ZP_07643815.1| GTP pyrophosphokinase [Streptococcus mitis SK321]
 gi|307617544|gb|EFN96714.1| GTP pyrophosphokinase [Streptococcus mitis SK321]
          Length = 740

 Score =  330 bits (847), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 190/494 (38%), Positives = 289/494 (58%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YL+  ++  V +AL+ A + H GQ R+SGEP+IIHP++VA IL +L+LD  ++A G 
Sbjct: 16  TKEYLTEEDVHFVHKALVYAVDCHCGQYRQSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT   T + +E EFG  VR IV+G   V+KLGK+K K+    +    A++ R+M
Sbjct: 76  LHDVVEDTEA-TLDDLEREFGPDVRVIVDG---VTKLGKVKYKSHEEQL----AENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM+E++RVI+VKL+DRLHNMRTL H+   KQ  I+ ET++++APLA  LG+  +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISKETMEIYAPLAHRLGISSVKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y N  ++ K+   + +  +E E  ++E    ++ K+ED  +     +K +I   
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLED--YTTDRHLKGKIYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSI++ +   R    E+  +  +R I+              Q   Y +LG VH +W
Sbjct: 242 PKHIYSIFRKMQDKRKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHELW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA  K NGYQS+HTT    +Y     +E QIRT+EM  +AE G+AAH++ 
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  + G V                 N+   A+ ++W+  + E Q++      ++EFVD++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDSV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             + L   ++VFTP G +++LPK +  +D+AY IHT++G K   AKVNG +V  T  L  
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445

Query: 617 AEVVEIITYNVSFS 630
            + VEI+T   SF 
Sbjct: 446 GDQVEIVTNPNSFG 459


>gi|374993650|ref|YP_004969149.1| RelA/SpoT family (p)ppGpp synthetase [Desulfosporosinus orientis
           DSM 765]
 gi|357212016|gb|AET66634.1| (p)ppGpp synthetase, RelA/SpoT family [Desulfosporosinus orientis
           DSM 765]
          Length = 739

 Score =  330 bits (847), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 194/479 (40%), Positives = 286/479 (59%), Gaps = 40/479 (8%)

Query: 146 LELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTN 205
           L +V +A   A  AH  Q R SGE +I+HP+EVA+IL ELE+D  +IAA LLHD VEDT 
Sbjct: 19  LAIVDKAYHFAEVAHRNQLRNSGEDYILHPLEVAQILVELEMDEATIAAALLHDVVEDTE 78

Query: 206 VVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVR 265
             T   IE+ FG  +  +V+G   V+KLG+++ K    S  + + ++LR+MFLAM +++R
Sbjct: 79  Y-TIADIEKNFGEEIALLVDG---VTKLGRIEYK----SKVEQQVENLRKMFLAMAKDIR 130

Query: 266 VIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTN 325
           VI++KLADRLHNMRTL +  P KQ  IA ETL++FAPLA  LG+++IK ELE+LSF Y  
Sbjct: 131 VILIKLADRLHNMRTLKYHSPAKQKEIAQETLEIFAPLANRLGIFRIKWELEDLSFRYLK 190

Query: 326 AEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYK 385
            E+Y  +   +A   +E E  +   N+++++  E    LD + +  +I    K  YSIY+
Sbjct: 191 PEEYYDLVEGIALKRREREAYI---NEVIVQMREK---LDEVQIYADIAGRPKHFYSIYR 244

Query: 386 AVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKD 445
            +      ++E+  +  +R+I+                 CY  LG++H +W PIP   KD
Sbjct: 245 KMTTQNKELSEIYDLMAIRVIV------------DSVNDCYGALGIIHTMWKPIPGRFKD 292

Query: 446 YIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVG 505
           YIA PKPN YQSLHTTLI    E+    E+QIRT EM   +E GIAAH+    +  G   
Sbjct: 293 YIAMPKPNMYQSLHTTLIG---ENGEPFEIQIRTCEMHRTSEYGIAAHWK---YKEGSGK 346

Query: 506 HARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSRV 565
               N  S +  +V     N   ++SWL  + EWQ +   +  + EF++++  DL    V
Sbjct: 347 ECSTNTTSNKTASV-----NFEQKLSWLRQLLEWQHD---SRDAGEFMESLKIDLFADTV 398

Query: 566 FVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
           FVFTP+G++  LP  +  VD+AY +HT++G++ + AK+NG +V     LAN +++EI+T
Sbjct: 399 FVFTPKGDVVELPAESCPVDFAYRVHTDVGHRCIGAKINGRIVPLDTKLANGDILEILT 457


>gi|359687928|ref|ZP_09257929.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Leptospira
           licerasiae serovar Varillal str. MMD0835]
 gi|418750353|ref|ZP_13306639.1| putative GTP diphosphokinase [Leptospira licerasiae str. MMD4847]
 gi|418758451|ref|ZP_13314633.1| GTP diphosphokinase [Leptospira licerasiae serovar Varillal str.
           VAR 010]
 gi|384114353|gb|EIE00616.1| GTP diphosphokinase [Leptospira licerasiae serovar Varillal str.
           VAR 010]
 gi|404272956|gb|EJZ40276.1| putative GTP diphosphokinase [Leptospira licerasiae str. MMD4847]
          Length = 677

 Score =  330 bits (846), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 189/498 (37%), Positives = 290/498 (58%), Gaps = 55/498 (11%)

Query: 126 SPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGEL 185
           + E L E +R T   + P  LEL+ +A  ++ ++H GQ R SGEP+I+HP++V  IL EL
Sbjct: 9   TKEMLLEGVRET---MGPEALELIEKAYKVSEDSHQGQFRLSGEPYIVHPLQVGFILYEL 65

Query: 186 ELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSV 245
            LD + I+AG+LHD +EDT   T E +  +FG  + ++VEG TK+S++       ++ S 
Sbjct: 66  GLDEKVISAGILHDVIEDTKY-TKEDMVRDFGTEITQLVEGVTKISQI-------KSQSK 117

Query: 246 QDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAK 305
           +   A+++R++ +A  +++RVI++KLAD+ HNMRTLS  PP KQ  IA ETL ++AP+A 
Sbjct: 118 ETEAAENIRKIIIATIQDIRVILIKLADKTHNMRTLSFQPPEKQRRIANETLSLYAPIAG 177

Query: 306 LLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLD 365
            LG+Y +KSELE+L+F     E+Y  +K+R++    E E  +E+   IL +++ + Q   
Sbjct: 178 RLGIYSVKSELEDLAFQVIFPEEYQDIKKRISAKKSEREDYIEKLQLILKQRLAEIQ--- 234

Query: 366 LMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQIC 425
              +   +    K  +SIY+ +     + +E+  +  +RI+                + C
Sbjct: 235 ---INANVEGRAKHFFSIYRKMKTKEKTFDEIFDLRAIRIV------------TDEIKDC 279

Query: 426 YHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLI 485
           Y VLG+VH +W+P+P   KDYIATPK N YQSLHTT+I         LEVQIRT EM+ I
Sbjct: 280 YGVLGIVHTLWSPVPGRFKDYIATPKTNMYQSLHTTVIG---PDGKPLEVQIRTAEMNAI 336

Query: 486 AERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVG 545
           AE GIAAH+  +       G    N R               L + WL  ++ WQ+    
Sbjct: 337 AEFGIAAHWVYK------EGKTHANERH--------------LTVKWLEVLQTWQD---S 373

Query: 546 NMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNG 605
           ++  +EF++ +  DL    VFVFTP+GEI  LPKGATV+D+A+ IHT++G     AK+NG
Sbjct: 374 SLDPKEFLEELKYDLHEDEVFVFTPKGEIIQLPKGATVLDFAFRIHTDVGLHCKGAKING 433

Query: 606 NLVSPTHVLANAEVVEII 623
            ++     L + + VE++
Sbjct: 434 RMIPLRTELRSGDQVEVV 451


>gi|340751522|ref|ZP_08688334.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
           [Fusobacterium mortiferum ATCC 9817]
 gi|229420490|gb|EEO35537.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
           [Fusobacterium mortiferum ATCC 9817]
          Length = 727

 Score =  330 bits (846), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 192/497 (38%), Positives = 293/497 (58%), Gaps = 60/497 (12%)

Query: 131 WEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDW 189
           WE++   I   +   ++E ++ A   A E H+GQ R+SGE +I+HPVEV +IL ++++D 
Sbjct: 4   WEEILKEIEKNNLKVDIEKIKLAFFFAEECHEGQYRKSGEDYIMHPVEVTKILIDMKMDT 63

Query: 190 ESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKL-GKLKCKNENHSVQDV 248
           ++I AG+LHD VEDT ++T   I+  FG TV  +V+G TK+  L    K ++EN      
Sbjct: 64  DTIVAGILHDIVEDT-LITLADIKYNFGETVATLVDGVTKLKTLPNGTKKQDEN------ 116

Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
               +R+M LAM + +RVII+KLADRLHNMRT+ +M P KQ SI+ ETL ++APLA  LG
Sbjct: 117 ----IRKMILAMAQNLRVIIIKLADRLHNMRTMKYMKPEKQISISQETLDIYAPLAHRLG 172

Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
           + +IK ELE+L+  Y   ++Y  +K  +    KE E+ ++   + ++        L    
Sbjct: 173 IAKIKWELEDLALRYLKPKEYMNIKSLIDSKKKEREEYIQGFIETIV------NLLHETG 226

Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
           +K  ++   K  YSIYK + +     +++  +  +RII+              +  CY+ 
Sbjct: 227 IKGSVKGRFKHFYSIYKKMYEKNKEFDDIYDLMGVRIIV------------DTEGECYNT 274

Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-PFLYESMFRLEVQIRTEEMDLIAE 487
           LG++H  + P+P   KDYIA PK N YQS+HTT++ P   +  F +E+QIRTEEMD +AE
Sbjct: 275 LGVIHSHFKPVPGRFKDYIAVPKSNNYQSIHTTIVGP---QGKF-IEIQIRTEEMDKVAE 330

Query: 488 RGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNM 547
            GIAAH+S            + + +  +   V            WL  I E Q+E     
Sbjct: 331 EGIAAHWS-----------YKEHTKVTKSDQVY----------GWLRNILELQKE---TE 366

Query: 548 TSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNL 607
           T++EF+D++T+D++   VFVF+P+G+I  LP+GAT +D+A+ IHT+IG K V AKVNG +
Sbjct: 367 TAQEFIDSVTKDIMNETVFVFSPKGDITELPQGATPLDFAFAIHTQIGCKCVGAKVNGKI 426

Query: 608 VSPTHVLANAEVVEIIT 624
           V+  + L N + VEIIT
Sbjct: 427 VTLDYKLQNGDRVEIIT 443


>gi|87121090|ref|ZP_01076981.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
           [Marinomonas sp. MED121]
 gi|86163582|gb|EAQ64856.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
           [Marinomonas sp. MED121]
          Length = 703

 Score =  330 bits (846), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 191/494 (38%), Positives = 287/494 (58%), Gaps = 52/494 (10%)

Query: 132 EDLRPT-ISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWE 190
           EDL  T I YLS  ++  ++RA   A +AHDGQ+R+SGEP++IHP+ VA+IL E  +D +
Sbjct: 5   EDLASTLIQYLSYEQVADIKRAYYYAEQAHDGQRRKSGEPYVIHPLAVAQILAEFRMDCD 64

Query: 191 SIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKA 250
            + A LLHD +EDT + + E + E+FG  V  +V+G   VSKL  L+  N+     + +A
Sbjct: 65  GLVAALLHDVIEDTGI-SREALTEQFGEGVAALVDG---VSKLTHLEFNNQ----LEKQA 116

Query: 251 DDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMY 310
            + ++M +AM +++RVI+VKLADRLHNMRTL  MP HK+  IA ETL ++AP+A  LGMY
Sbjct: 117 HNFQKMAMAMADDIRVILVKLADRLHNMRTLDSMPAHKKRRIARETLDIYAPIANRLGMY 176

Query: 311 QIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVK 370
            ++  LE+L+F          + R +   Y +  K+ E+    L  ++  D       ++
Sbjct: 177 NVRINLESLAFQAYYPMRARMLNRAINKKYGQRIKDTEKLGDYLKSELAAD------YIE 230

Query: 371 TEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLG 430
           ++I    K  YSIY+ + K R S+ E+  +  +RII                  CY +LG
Sbjct: 231 SDISIREKHIYSIYQKMQKKRRSLGEIMDVVGVRII------------TDKHDSCYRILG 278

Query: 431 LVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGI 490
           ++H ++ P+    KDYIA PK NGYQSLHTT++     +   +EVQIRT+EM+++A+ GI
Sbjct: 279 VIHSLFKPVEGRFKDYIAVPKSNGYQSLHTTVVG---TNGLPMEVQIRTQEMNMVADNGI 335

Query: 491 AAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSR 550
           AAH++   + T   G +  + R+ +                W+ ++ E Q++  GN    
Sbjct: 336 AAHWA---YKTTSAGASNSHDRATK----------------WVKSLLEIQQK-AGNAI-- 373

Query: 551 EFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSP 610
           EFVD +  DL    V+VFTP GEI  LP GAT VD+AY +HTEIGN  ++ ++N  L   
Sbjct: 374 EFVDNVKNDLFPDEVYVFTPNGEIIELPTGATPVDFAYGVHTEIGNTCISCRINRRLSPL 433

Query: 611 THVLANAEVVEIIT 624
           +  L + + VEIIT
Sbjct: 434 STQLESGQTVEIIT 447


>gi|427717556|ref|YP_007065550.1| (p)ppGpp synthetase I SpoT/RelA [Calothrix sp. PCC 7507]
 gi|427349992|gb|AFY32716.1| (p)ppGpp synthetase I, SpoT/RelA [Calothrix sp. PCC 7507]
          Length = 756

 Score =  330 bits (846), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 192/477 (40%), Positives = 274/477 (57%), Gaps = 47/477 (9%)

Query: 148 LVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVV 207
           L+  A   A+  H GQ R+SGEP+I HPV VA +L +L      IAAG LHD VEDT+V 
Sbjct: 43  LIGEAFKFAYRLHQGQYRKSGEPYICHPVAVAGLLRDLGGSAAMIAAGFLHDVVEDTDV- 101

Query: 208 TFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVI 267
           T E+I E FG  VR++VEG TK+SK+   K K E+      +A++ R+MFL+M +++RVI
Sbjct: 102 TIEQIGELFGPEVRQLVEGVTKLSKI-NFKSKTES------QAENFRRMFLSMAQDIRVI 154

Query: 268 IVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAE 327
           +VKLADRLHNMRTL  MP  K+  IA ET  +FAPLA  LG++  K ELE+LSF Y   E
Sbjct: 155 VVKLADRLHNMRTLQVMPDDKRRRIAQETRDIFAPLANRLGIWHFKWELEDLSFKYLEPE 214

Query: 328 DYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAV 387
            + ++++ VA+     E++L  A  IL ++++      L     ++    K  YSIY+ +
Sbjct: 215 SFREIQQHVAEKRTSREEKLARATTILQERLKQAGIECL-----DVSGRPKHLYSIYQKM 269

Query: 388 LKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYI 447
            + +   +E+  +A LRII++              + CY  L +VH  + PIP   KDYI
Sbjct: 270 QRQQKEFHEIYDLAALRIIVRTN------------EECYRALAVVHDAFRPIPGRFKDYI 317

Query: 448 ATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHA 507
             PKPN YQSLHT +I         LEVQIRT+EM  IAE GIAAH+  +          
Sbjct: 318 GLPKPNRYQSLHTGVIGLTGRP---LEVQIRTQEMHHIAEYGIAAHWKYK---------- 364

Query: 508 RPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSRVFV 567
                   G +   N      + +WL  + EWQ +      ++E++D++  +L    V+V
Sbjct: 365 ------ETGGSNVSNLTTSDEKFTWLRQLLEWQSDL---KDAQEYLDSVKDNLFEDDVYV 415

Query: 568 FTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
           FTP+G++  L  GAT +D+AY IHTE+GN    A+VNG +V  +  L N ++V I+T
Sbjct: 416 FTPKGDVVPLSPGATTIDFAYRIHTEVGNHCAGARVNGRMVPLSTRLQNGDIVVIMT 472


>gi|418966746|ref|ZP_13518464.1| RelA/SpoT family protein [Streptococcus mitis SK616]
 gi|383346547|gb|EID24579.1| RelA/SpoT family protein [Streptococcus mitis SK616]
          Length = 740

 Score =  330 bits (846), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 189/494 (38%), Positives = 289/494 (58%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YL+  ++  V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD  ++A G 
Sbjct: 16  TKEYLTEEDVHFVHKALVYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT+  T + +E EFG  VR IV+G   V+KLGK+K K+    +    A++ R+M
Sbjct: 76  LHDVVEDTDA-TLDDLEREFGPDVRVIVDG---VTKLGKVKYKSHEEQL----AENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM+E++RVI+VKL+DRLHNMRTL H+   KQ  I+ ET++++APLA  LG+  +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISKETMEIYAPLAHRLGISSVKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y N  ++ K+   + +  +E E  ++E    ++ K+E  ++     +K +I   
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLE--EYTTDRHLKGKIYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSI++ +   R    E+  +  +R I+              Q   Y +LG VH +W
Sbjct: 242 PKHIYSIFRKMQDKRKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHELW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA  K NGYQS+HTT    +Y     +E QIRT+ M  +AE G+AAH++ 
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKAMHEVAEYGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  + G V                 N+   A+ ++W+  + E Q++      ++EFVD++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDSV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             + L   ++VFTP G +++LPK +  +D+AY IHT++G K   AKVNG +V  T  L  
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445

Query: 617 AEVVEIITYNVSFS 630
            + VEI+T   SF 
Sbjct: 446 GDQVEIVTNPNSFG 459


>gi|329767283|ref|ZP_08258809.1| hypothetical protein HMPREF0428_00506 [Gemella haemolysans M341]
 gi|328836205|gb|EGF85875.1| hypothetical protein HMPREF0428_00506 [Gemella haemolysans M341]
          Length = 725

 Score =  330 bits (846), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 193/485 (39%), Positives = 287/485 (59%), Gaps = 50/485 (10%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           YL   +++ +R+A   A  AH+GQ R+SGEP+I+HPV+VA IL EL+LD+ +I AG LHD
Sbjct: 19  YLPEEQIKTIRKAYEFAKVAHEGQFRKSGEPYILHPVQVAGILTELKLDYATICAGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            VEDT   TF+ I+E FG  +  IV+G   V+KL K+K +++  S    +A++ R++F++
Sbjct: 79  VVEDTKY-TFDDIKETFGEDIAVIVDG---VTKLDKVKFRSKKQS----QAENHRKLFVS 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           + +++RVI VKLADRLHNMRT+ +M   KQ  I++ETL+++APLA  LG+  +K ELE+ 
Sbjct: 131 IAKDLRVIFVKLADRLHNMRTMKYMREEKQREISSETLEIYAPLAHRLGISSVKWELEDT 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           S  Y +   Y      +  + K+     EE+ K     I     L    +K ++    K 
Sbjct: 191 SLRYLHPSQYFS----IVGMMKQKRSAREESIKDACSSI--TSILAENNIKAQVTGRPKH 244

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIYK ++K   + +++  +  +R+++       V         CY  LGLV+ +W PI
Sbjct: 245 IYSIYKKMVKQNKTFDQIYDLLAVRVLV-----DSVAD-------CYATLGLVNNLWVPI 292

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P  +KDYIA PKPN YQSLHTT+I    ++   LEVQIRT EM  IAE+GIAAH++ +  
Sbjct: 293 PGRIKDYIAMPKPNMYQSLHTTVIAPDGQT---LEVQIRTYEMHEIAEKGIAAHWAYK-- 347

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
                           GK V  NN N   +++W   I E  E      T+  F++++  D
Sbjct: 348 ---------------EGKKVNKNN-NFYEKLNWFQKIAENDE---TEATAESFMESLKVD 388

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           LL  +++VFTP  +I  LPKG+ +VD+AY IH+E+GNKMV A VN  +    +VL+  E+
Sbjct: 389 LLSDKIYVFTPNSDIIELPKGSCIVDFAYAIHSEVGNKMVGATVNDKIEPFDYVLSTGEI 448

Query: 620 VEIIT 624
            +I T
Sbjct: 449 CDIRT 453


>gi|116492882|ref|YP_804617.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
           [Pediococcus pentosaceus ATCC 25745]
 gi|421894250|ref|ZP_16324740.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Pediococcus
           pentosaceus IE-3]
 gi|116103032|gb|ABJ68175.1| Guanosine polyphosphate pyrophosphohydrolase/synthetase
           [Pediococcus pentosaceus ATCC 25745]
 gi|385272794|emb|CCG90112.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Pediococcus
           pentosaceus IE-3]
          Length = 743

 Score =  330 bits (846), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 193/485 (39%), Positives = 282/485 (58%), Gaps = 48/485 (9%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++      V++A   A   H  Q R+SGEP+I+HP++VA IL  L++D E++AAG LHD
Sbjct: 19  YMNEEHAAFVQKACDFASYVHKEQYRQSGEPYIMHPIQVAGILANLKMDPETVAAGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
           TVEDT ++T   IEE FG  V  IV+G   VSK+ K+K K    S Q+  A++ R++ LA
Sbjct: 79  TVEDT-LITLGDIEELFGKDVAVIVDG---VSKISKIKYK----SNQEQLAENHRKLLLA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M++++RVIIVKLADRLHNMRTL H+ P KQ  I+ ETL+++APLA+ LG+  IK ELE++
Sbjct: 131 MSQDIRVIIVKLADRLHNMRTLQHLRPDKQRRISNETLEIYAPLAERLGISTIKWELEDI 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           S  Y N + Y ++   +     + E+ ++ A   L   +E     DL    TEI    K 
Sbjct: 191 SLRYLNPQQYYRIVHLMNSRRNQREEYIDSAISELKSAVE-----DLQLKHTEIYGRPKH 245

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIY+ ++      +++  +  +R+I                + CY VLG +H  W PI
Sbjct: 246 IYSIYRKMVDQHKQFSQIYDLLAIRVI------------TVSVRDCYAVLGAIHAKWKPI 293

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK N YQSLHTT++         LE+QIRT+ M  +AE G+AAH++   +
Sbjct: 294 PGRFKDYIAMPKANMYQSLHTTVVG---PEGRPLEIQIRTQAMHRVAEYGVAAHWA---Y 347

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
             G+             K     N   A +++W   I E Q+E   +  + +F++ +  D
Sbjct: 348 KEGI-------------KDELAQNTTDA-KLNWFKEIVELQDE---SNDAADFMEGVKGD 390

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           L G RV+ FTP+G++  LPKGA  +D AY+IHTE+GN    AKVNG +V   + + N ++
Sbjct: 391 LFGDRVYAFTPKGDVYELPKGAGPLDLAYIIHTEVGNHATGAKVNGKIVPLDYTIKNGDI 450

Query: 620 VEIIT 624
           VEI+T
Sbjct: 451 VEILT 455


>gi|415752850|ref|ZP_11479832.1| GTP pyrophosphokinase [Streptococcus pneumoniae SV36]
 gi|381308497|gb|EIC49340.1| GTP pyrophosphokinase [Streptococcus pneumoniae SV36]
          Length = 740

 Score =  330 bits (846), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 190/494 (38%), Positives = 289/494 (58%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YL+  ++  V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD  ++A G 
Sbjct: 16  TKEYLTEEDVHFVHKALVYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT+  T + +E EFG  VR IV+G   V+KLGK++ K    S+++  A++ R+M
Sbjct: 76  LHDVVEDTDA-TLDDLEREFGPDVRVIVDG---VTKLGKVEYK----SIEEQLAENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM+E++RVI VKL+DRLHNMRTL H+   KQ  I+ ET++++APLA  LG+  +K EL
Sbjct: 128 LMAMSEDIRVIFVKLSDRLHNMRTLKHLRKDKQERISKETMEIYAPLAHRLGISSVKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y N  ++ K+   + +  +E E  ++E    ++ K+E  ++     +K +I   
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLE--EYTTERHLKGKIYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSI++ +   R    E+  +  +R I+              Q   Y +LG VH  W
Sbjct: 242 PKHIYSIFRKMQDKRKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHEFW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA  K NGYQS+HTT    +Y     +E QIRT+EM  +AE G+AAH++ 
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  + G V                 N+   A+ ++W+  + E Q++   +   +EFVD++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQADDD---KEFVDSV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             + L   ++VFTP G +++LPK +  +D+AY IHT++G K   AKVNG +V  T  L  
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445

Query: 617 AEVVEIITYNVSFS 630
            + VEII    SF 
Sbjct: 446 GDQVEIIANPNSFG 459


>gi|387788694|ref|YP_006253762.1| GTP pyrophosphokinase [Streptococcus pneumoniae ST556]
 gi|379138436|gb|AFC95227.1| GTP pyrophosphokinase [Streptococcus pneumoniae ST556]
          Length = 740

 Score =  330 bits (846), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 190/494 (38%), Positives = 290/494 (58%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YL+  ++  V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD  ++A G 
Sbjct: 16  TKEYLTEEDVYFVHKALVYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT+  T + +E EFG  VR IV+G   V+KLGK++ K    S+++  A++ R+M
Sbjct: 76  LHDVVEDTDA-TLDDLEREFGPDVRVIVDG---VTKLGKVEYK----SIEEQLAENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM+E++RVI+VKL+DRLHNMRTL H+   KQ  I+ ET++++APLA  LG+  +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISKETMEIYAPLAHRLGISSVKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y N  ++ K+   + +  +E E  ++E    ++ K+E  ++     +K +I   
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLE--EYTTERHLKGKIYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSI++ +   R    E+  +  +R I+              Q   Y +LG VH  W
Sbjct: 242 PKHIYSIFRKMQDKRKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHEFW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA  K NGYQS+HTT    +Y     +E QIRT+EM  +AE G+AAH++ 
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  + G V                 N+   A+ ++W+  + E Q++      ++EFVD++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDSV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             + L   ++VFTP G +++LPK +  +D+AY IHT++G K   AKVNG +V  T  L  
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445

Query: 617 AEVVEIITYNVSFS 630
            + VEII    SF 
Sbjct: 446 GDQVEIIANPNSFG 459


>gi|331701363|ref|YP_004398322.1| (p)ppGpp synthetase I SpoT/RelA [Lactobacillus buchneri NRRL
           B-30929]
 gi|406026925|ref|YP_006725757.1| GTP pyrophosphokinase [Lactobacillus buchneri CD034]
 gi|329128706|gb|AEB73259.1| (p)ppGpp synthetase I, SpoT/RelA [Lactobacillus buchneri NRRL
           B-30929]
 gi|405125414|gb|AFS00175.1| putative GTP pyrophosphokinase [Lactobacillus buchneri CD034]
          Length = 742

 Score =  330 bits (846), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 197/499 (39%), Positives = 293/499 (58%), Gaps = 52/499 (10%)

Query: 129 RLW--EDLRPTIS-YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGEL 185
           ++W  +D+   +S Y++   ++ +R+A   A  AH  QKR+SGEP+I HP +VA IL +L
Sbjct: 4   KIWTPDDVINKVSEYMNKEHVDEIRKAYQFAKIAHQYQKRQSGEPYITHPTQVAGILADL 63

Query: 186 ELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSV 245
            +D E+++AG LHD VEDT   T   I+E FG  +  IV+G   V+KL K+K K    S 
Sbjct: 64  HMDPETVSAGFLHDVVEDTGA-TLGDIQELFGHDIALIVDG---VTKLSKIKYK----SS 115

Query: 246 QDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAK 305
           ++  A++ R++ LAM +++RV+IVKLADRLHNMRTL  + P KQ  IA+ETL+++AP+A 
Sbjct: 116 EERLAENHRKLLLAMCKDIRVMIVKLADRLHNMRTLKSLRPDKQRRIASETLEIYAPIAD 175

Query: 306 LLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLD 365
            LG+  IK ELE++S  Y N + Y ++   +     +    +E+A K + K I       
Sbjct: 176 RLGIGTIKWELEDISLRYLNPQQYYRIVHLMNSRRDQRVDYIEKAIKEVKKAIS------ 229

Query: 366 LMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQIC 425
            + VK EI    K  YS+Y+ +++     +++  +  +R+I+               + C
Sbjct: 230 ALGVKAEIYGRPKHIYSVYRKMVEKHKQFSQIYDLLAIRVIV------------DSIKDC 277

Query: 426 YHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLI 485
           Y VLG +H  W P+P   KDYIA PK N YQSLHTT+I    +    LEVQIRTEEM  +
Sbjct: 278 YAVLGAIHSEWKPMPGRFKDYIAMPKANMYQSLHTTVIGPEGKP---LEVQIRTEEMHRV 334

Query: 486 AERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVG 545
           AE GIAAH++ +  +T  V            KT   NN     +++W   I E QE+   
Sbjct: 335 AEFGIAAHWAYKEGITNGV------------KTSQDNN-----KLNWFKQIIELQED--- 374

Query: 546 NMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNG 605
              + +F+D++  +L G  V+VFTP+G++  LPKGA  +D AYMIHTE+GN    A+VNG
Sbjct: 375 TDDAADFMDSVKGELFGDHVYVFTPKGDVYELPKGAGPLDMAYMIHTEVGNHTTGARVNG 434

Query: 606 NLVSPTHVLANAEVVEIIT 624
            +V   H + N ++V+IIT
Sbjct: 435 KIVPLDHQVKNGDIVDIIT 453


>gi|15643492|ref|NP_228538.1| (p)ppGpp synthetase [Thermotoga maritima MSB8]
 gi|4981255|gb|AAD35811.1|AE001744_1 (p)ppGpp synthetase [Thermotoga maritima MSB8]
          Length = 751

 Score =  330 bits (846), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 198/485 (40%), Positives = 280/485 (57%), Gaps = 52/485 (10%)

Query: 141 LSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDT 200
            +  E +L+ +A   A   H+GQKR SGEPFI HPVEV +IL  L +D  ++ A LLHD 
Sbjct: 63  FTREEKKLLIKAYEFARIVHEGQKRFSGEPFITHPVEVTKILAGLGVDVTTLVAALLHDV 122

Query: 201 VEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAM 260
           VED   V+ ++I++EFG  V RIV+G TKVS +     ++++      K + +++MF AM
Sbjct: 123 VEDGENVSLDQIKKEFGPEVARIVDGVTKVSNINAPIGRDQDSR---KKIETIQKMFFAM 179

Query: 261 TEEVRVIIVKLADRLHNMRTLSHMP-PHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
            E++RVI VKLADRLHNMRT+ ++  P K+   A ETL+++APLA  LG+Y IKSELE+L
Sbjct: 180 AEDMRVIFVKLADRLHNMRTIHYVQDPEKKRYKAYETLEIYAPLAHKLGIYSIKSELEDL 239

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           +F     E+Y K+K  VA+  KE EK   E   +L   +E+ +      +K  +    K 
Sbjct: 240 AFKVLYPEEYYKIKELVAEKRKEREKRTNEYISLLKSALEEHK------IKAIVEGRYKH 293

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSI++ + +      E+  +  LR+I+K                CY VLG+VH IW P+
Sbjct: 294 YYSIWRKMKEKGKKFEEIYDLIALRVIVKDVTT------------CYTVLGIVHNIWKPL 341

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK NGY+SLHTT+I    E    LE+QIR EEM   AE G+ AH+     
Sbjct: 342 PGRFKDYIAAPKSNGYRSLHTTVITGYGEP---LEIQIRDEEMHREAEYGLIAHW----- 393

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
               +   RP+ ++ +                W+  + +W++E     T  EF D I ++
Sbjct: 394 ----IYKERPDVKTAK---------------EWIERLLDWRKELAQGFT--EFED-IKKE 431

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           L    VFVFTP+G+I +LPKG+T +D+AY IHTEIG+    AKVNG +V   + L N +V
Sbjct: 432 LQMDEVFVFTPKGDILHLPKGSTPIDFAYAIHTEIGHHYSGAKVNGKIVPIDYQLKNGDV 491

Query: 620 VEIIT 624
           VEII 
Sbjct: 492 VEIIV 496


>gi|421230253|ref|ZP_15686917.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2061376]
 gi|395593779|gb|EJG54021.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2061376]
          Length = 740

 Score =  330 bits (846), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 190/494 (38%), Positives = 290/494 (58%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YL+  ++  V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD  ++A G 
Sbjct: 16  TKEYLTEEDVHFVHKALVYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT+  T + +E EFG  VR IV+G   V+KLGK++ K    S+++  A++ R+M
Sbjct: 76  LHDVVEDTDA-TLDDLEREFGPDVRVIVDG---VTKLGKVEYK----SIEEQLAENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM+E++RVI+VKL+DRLHNMRTL H+   KQ  I+ ET++++APLA  LG+  +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISKETMEIYAPLAHRLGISSVKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y N  ++ K+   + +  +E E  ++E    ++ K+E  ++     +K +I   
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLE--EYTTERHLKGKIYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSI++ +   R    E+  +  +R I+              Q   Y +LG VH  W
Sbjct: 242 PKHIYSIFRKMQDKRKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHEFW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA  K NGYQS+HTT    +Y     +E QIRT+EM  +AE G+AAH++ 
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  + G V                 N+   A+ ++W+  + E Q++      ++EFVD++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDSV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             + L   ++VFTP G +++LPK +  +D+AY IHT++G K   AKVNG +V  T  L  
Sbjct: 386 KENYLAEEIYVFTPDGVVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445

Query: 617 AEVVEIITYNVSFS 630
            + VEII    SF 
Sbjct: 446 GDQVEIIANPNSFG 459


>gi|406874357|gb|EKD24330.1| hypothetical protein ACD_81C00051G0002 [uncultured bacterium]
          Length = 584

 Score =  330 bits (846), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 189/492 (38%), Positives = 292/492 (59%), Gaps = 53/492 (10%)

Query: 141 LSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDT 200
           LS  E+EL+++A + + +AH+ QKR SGEP+  H  + A  L   +LD  +IAAGLLHDT
Sbjct: 19  LSDAEVELLKKAYLTSQKAHENQKRNSGEPYFNHVFQTALTLASWDLDTATIAAGLLHDT 78

Query: 201 VEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNE---NHSVQDVKADDLRQMF 257
           VEDT+    E ++++FG  +  +V G   V+KLG LK +      H   +  A++LR+M 
Sbjct: 79  VEDTSY-KLETLQKDFGEEIAFLVNG---VTKLGHLKYRTSVKTEHERMEHLAENLRKMI 134

Query: 258 LAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELE 317
           LA++E++RV+ VKLADRLHNM TL  +P  KQ  IA ETL+++APLA  LGM  +  ELE
Sbjct: 135 LAISEDLRVVFVKLADRLHNMTTLGSVPSLKQKRIALETLEIYAPLAYRLGMQNLSGELE 194

Query: 318 NLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVC 377
           +L+FMY + E+Y  +K+ V++ Y+E  + LE    +L   ++     ++  +K + R+  
Sbjct: 195 DLTFMYLHPEEYEWMKKNVSEQYEERVQYLERVEPLLRTALKK---ANIEPIKIDYRA-- 249

Query: 378 KEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWT 437
           K   S+YK +L+S  ++ ++     LR+I+            +  + CY  LG+VH +W 
Sbjct: 250 KRLSSLYKKLLRSDMNLEQIYDFVALRVIV------------NTVEECYSALGMVHQLWP 297

Query: 438 PIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHY--- 494
           P+P  +KDYIA PKPNGY+SLHTT+     E     E+QIRT +M   AE GIAAH+   
Sbjct: 298 PMPGRIKDYIALPKPNGYKSLHTTV---FCEDKRVTEIQIRTLQMHEEAENGIAAHWAYS 354

Query: 495 ---SGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
              + + F+ G              K+  +  A+    ++W+N +R WQ++F G     E
Sbjct: 355 QAKTSKEFIAG-------------DKSFSVKQAD----LNWVNQLRNWQKDFTG---PDE 394

Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
           FV ++  D    RVF  TP+GE+ +LP G+T +D+AY IH+EIG+  V AKVN  +V   
Sbjct: 395 FVQSLKIDFFKHRVFAITPKGEVIDLPTGSTPIDFAYQIHSEIGDHCVGAKVNNKMVPLD 454

Query: 612 HVLANAEVVEII 623
           + + + ++V+I+
Sbjct: 455 YQIESGDLVDIL 466


>gi|456011591|gb|EMF45328.1| GTP pyrophosphokinase [Planococcus halocryophilus Or1]
          Length = 727

 Score =  330 bits (846), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 189/502 (37%), Positives = 296/502 (58%), Gaps = 50/502 (9%)

Query: 129 RLWEDLRPTI-SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELEL 187
           R  ED+   + SY++ + ++ +++A  +A++AH GQ R+SGEP+I+HPV+VA IL +L++
Sbjct: 7   RTAEDVFEMVASYMNADHVQTIKKAYQVAYDAHMGQFRKSGEPYIVHPVQVAGILADLQM 66

Query: 188 DWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQD 247
           D  ++AAG LHD VEDT V + E I  +F   V  +V+G TK+SK+  L       S ++
Sbjct: 67  DPATVAAGFLHDVVEDTEV-SREDIVHDFDEEVAMLVDGVTKLSKIKYL-------SKEE 118

Query: 248 VKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLL 307
            +A++ R+MF+AM +++RVI++KLADRLHN+RTL +    KQ   A ETL++FAP+A  L
Sbjct: 119 QQAENHRKMFVAMAQDIRVILIKLADRLHNLRTLKYQTVEKQRIKANETLEIFAPIAHRL 178

Query: 308 GMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLM 367
           G+  IK ELE+ +  Y N + Y     R+ +L K+   E E+    +M ++     LD +
Sbjct: 179 GINTIKWELEDTALRYLNPQQYY----RIVNLMKKKRTEREDYLNKVMGEVRVQ--LDEV 232

Query: 368 TVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYH 427
            +K ++    K  YSIY+ +       NE+  +  +RI ++              + CY 
Sbjct: 233 DIKADLFGRPKHIYSIYRKMAIQNKQFNEIYDLLAVRITVESI------------KDCYA 280

Query: 428 VLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAE 487
           VLG++H  W P+P   KDYIA PK N YQSLHTT+I    +    LEVQIRTEEM  IAE
Sbjct: 281 VLGIIHSTWKPMPGRFKDYIAMPKQNLYQSLHTTVIGPQGDP---LEVQIRTEEMHRIAE 337

Query: 488 RGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNM 547
            G+AAH++ +                  GK +    +++  R+SW   I ++Q E   + 
Sbjct: 338 YGVAAHWAYK-----------------EGKIIDKPKSSVDSRLSWFREILDFQNE---SD 377

Query: 548 TSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNL 607
            + EF++++  DL    V+VF+P+G++  +P G+  +D+AY +H+EIGNK + AK+NG +
Sbjct: 378 NAEEFMESLKYDLFSDMVYVFSPKGDVIEMPAGSCPIDFAYRVHSEIGNKTIGAKINGKM 437

Query: 608 VSPTHVLANAEVVEIITYNVSF 629
           V     L   ++VEI+T   SF
Sbjct: 438 VPLDTELHTGDIVEILTSKQSF 459


>gi|290968824|ref|ZP_06560361.1| GTP diphosphokinase [Megasphaera genomosp. type_1 str. 28L]
 gi|290781120|gb|EFD93711.1| GTP diphosphokinase [Megasphaera genomosp. type_1 str. 28L]
          Length = 733

 Score =  330 bits (846), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 193/502 (38%), Positives = 288/502 (57%), Gaps = 52/502 (10%)

Query: 128 ERLWEDLRPTISYLSPNELEL-VRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELE 186
           E  ++ L  TI    P+  +  +++A +LA +AH  Q+R SGE +I+HP+ VA+IL +++
Sbjct: 8   EEKFQQLVATIHSYQPDAPDSDLQKAFLLAADAHKDQRRVSGEWYIVHPLAVAQILADMK 67

Query: 187 LDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQ 246
           +D  +I A LLHD VEDT     + IE  FG  V  +V+G TK+++L       +  + +
Sbjct: 68  IDATTITASLLHDVVEDT-AYMLDDIENLFGKEVAFLVDGVTKLNRL-------DYRTKE 119

Query: 247 DVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKL 306
           D + + +R+MFLAM ++VRV+++KLADRLHNMRTL  M   KQ  I+ ETL++FAPLA  
Sbjct: 120 DQQINSMRKMFLAMAKDVRVVVIKLADRLHNMRTLRFMRSDKQKRISQETLEIFAPLAHR 179

Query: 307 LGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDL 366
           LG++ IK ELE+LSF Y   + Y  +  ++       E+ + EA ++L K       L  
Sbjct: 180 LGIFNIKWELEDLSFRYLEPDKYYDLVDQMKQKRHVREEIVNEAIEVLRKA------LTA 233

Query: 367 MTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICY 426
             ++ EI    K  YSIYK + K    +++V  +  +RII+               Q CY
Sbjct: 234 SHIQFEINGRPKHFYSIYKKMKKDNRDLSQVYDLYAIRIIV------------DTVQDCY 281

Query: 427 HVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIA 486
            VLG+VH +W P+P   KDYIA PKPN YQSLHTT+I    +    +E+QIRT EM  +A
Sbjct: 282 GVLGIVHSLWKPLPYRFKDYIAMPKPNNYQSLHTTVIGTRGQP---VEIQIRTWEMHRVA 338

Query: 487 ERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGN 546
           E G+AAH+  +             GR+  G            ++ WL  + EWQ+     
Sbjct: 339 EYGVAAHWRYK------------EGRANAGAN------EFDEKMGWLRNLLEWQD----T 376

Query: 547 MTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGN 606
              REF++ +  D     VFVFTPRG++ +LP+G+  +D+AY IHT++G++ V AK+NG 
Sbjct: 377 TNPREFMNALKLDAFSDEVFVFTPRGDVIDLPQGSIPIDFAYRIHTDVGHRCVGAKINGK 436

Query: 607 LVSPTHVLANAEVVEIITYNVS 628
           +V   + L N ++VEIIT  V 
Sbjct: 437 IVPLDYPLKNGDIVEIITSKVG 458


>gi|415750037|ref|ZP_11477981.1| GTP pyrophosphokinase [Streptococcus pneumoniae SV35]
 gi|418133094|ref|ZP_12769965.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA11304]
 gi|353804977|gb|EHD85255.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA11304]
 gi|381318331|gb|EIC59056.1| GTP pyrophosphokinase [Streptococcus pneumoniae SV35]
          Length = 740

 Score =  330 bits (846), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 189/494 (38%), Positives = 290/494 (58%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YL+  ++  V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD  ++A G 
Sbjct: 16  TKEYLTEEDVHFVHKALVYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT+  T + +E EFG  VR IV+G   V+KLGK++ K    S+++  A++ R+M
Sbjct: 76  LHDVVEDTDA-TLDDLEREFGPDVRVIVDG---VTKLGKVEYK----SIEEQLAENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM+E++RVI+VKL+DRLHNMRTL H+   KQ  I+ ET++++APLA  LG+  +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISKETMEIYAPLAHRLGISSVKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y N  ++ K+   + +  +E E  ++E    ++ K+E  ++     +K +I   
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLE--EYTTERHLKGKIYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSI++ +   R    E+  +  +R I+              Q   Y +LG VH  W
Sbjct: 242 PKHIYSIFRKMQDKRKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHEFW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA  K NGYQS+HTT    +Y     +E QIRT+EM  +AE G+AAH++ 
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  + G V                 N+   A+ ++W+  + E Q++      ++EFVD++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDSV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             + L   ++VFTP G +++LPK +  +D+AY IHT++G K   AKVNG +V  T  L  
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445

Query: 617 AEVVEIITYNVSFS 630
            + VEI+    SF 
Sbjct: 446 GDQVEIVANPNSFG 459


>gi|225861474|ref|YP_002742983.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
           [Streptococcus pneumoniae Taiwan19F-14]
 gi|417313123|ref|ZP_12099835.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA04375]
 gi|418094436|ref|ZP_12731563.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA49138]
 gi|418142159|ref|ZP_12778972.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA13455]
 gi|418153383|ref|ZP_12790121.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA16121]
 gi|418157938|ref|ZP_12794654.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA16833]
 gi|418228152|ref|ZP_12854769.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae 3063-00]
 gi|419438683|ref|ZP_13978751.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA13499]
 gi|419480488|ref|ZP_14020293.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA19101]
 gi|419500190|ref|ZP_14039884.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA47597]
 gi|419502297|ref|ZP_14041981.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA47628]
 gi|419519357|ref|ZP_14058963.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA08825]
 gi|419527982|ref|ZP_14067525.1| relA/SpoT family protein [Streptococcus pneumoniae GA17719]
 gi|225728365|gb|ACO24216.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
           [Streptococcus pneumoniae Taiwan19F-14]
 gi|327389831|gb|EGE88176.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA04375]
 gi|353764932|gb|EHD45480.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA49138]
 gi|353806410|gb|EHD86684.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA13455]
 gi|353816934|gb|EHD97142.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA16121]
 gi|353824386|gb|EHE04560.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA16833]
 gi|353880547|gb|EHE60362.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae 3063-00]
 gi|379537090|gb|EHZ02275.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA13499]
 gi|379566135|gb|EHZ31126.1| relA/SpoT family protein [Streptococcus pneumoniae GA17719]
 gi|379570442|gb|EHZ35406.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA19101]
 gi|379599498|gb|EHZ64281.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA47597]
 gi|379600510|gb|EHZ65291.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA47628]
 gi|379641194|gb|EIA05732.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           pneumoniae GA08825]
 gi|429316493|emb|CCP36199.1| GTP pyrophosphokinase [Streptococcus pneumoniae SPN034156]
          Length = 740

 Score =  330 bits (846), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 190/494 (38%), Positives = 290/494 (58%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YL+  ++  V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD  ++A G 
Sbjct: 16  TKEYLTEEDVYFVHKALVYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT+  T + +E EFG  VR IV+G   V+KLGK++ K    S+++  A++ R+M
Sbjct: 76  LHDVVEDTDA-TLDDLEREFGPDVRMIVDG---VTKLGKVEYK----SIEEQLAENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM+E++RVI+VKL+DRLHNMRTL H+   KQ  I+ ET++++APLA  LG+  +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISKETMEIYAPLAHRLGISSVKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y N  ++ K+   + +  +E E  ++E    ++ K+E  ++     +K +I   
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLE--EYTTERHLKGKIYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSI++ +   R    E+  +  +R I+              Q   Y +LG VH  W
Sbjct: 242 PKHIYSIFRKMQDKRKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHEFW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA  K NGYQS+HTT    +Y     +E QIRT+EM  +AE G+AAH++ 
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  + G V                 N+   A+ ++W+  + E Q++      ++EFVD++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMIELQDQ---ADDAKEFVDSV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             + L   ++VFTP G +++LPK +  +D+AY IHT++G K   AKVNG +V  T  L  
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445

Query: 617 AEVVEIITYNVSFS 630
            + VEII    SF 
Sbjct: 446 GDQVEIIANPNSFG 459


>gi|194397589|ref|YP_002038260.1| GTP pyrophosphokinase [Streptococcus pneumoniae G54]
 gi|194357256|gb|ACF55704.1| GTP pyrophosphokinase [Streptococcus pneumoniae G54]
          Length = 740

 Score =  330 bits (846), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 190/494 (38%), Positives = 289/494 (58%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YL+  ++  V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD  ++A G 
Sbjct: 16  TKEYLTEEDVHFVHKALVYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT+  T + +E EFG  VR IV+G   V+KLGK++ K    S+++  A++ R+M
Sbjct: 76  LHDVVEDTDA-TLDDLEREFGPDVRVIVDG---VTKLGKVEYK----SIEEQLAENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM+E++RVI+VKL+DRLHNMRTL H+   KQ  I  ET++++APLA  LG+  +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERIXKETMEIYAPLAHRLGISSVKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y N  ++ K+   + +  +E E  ++E    ++ K+E  ++     +K +I   
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLE--EYTTERHLKGKIYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSI++ +   R    E+  +  +R I+              Q   Y +LG VH  W
Sbjct: 242 PKHIYSIFRKMQDKRKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHEFW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA  K NGYQS+HTT    +Y     +E QIRT+EM  +AE G+AAH++ 
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  + G V                 N+   A+ ++W+  + E Q++      ++EFVD++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDSV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             + L   ++VFTP G +++LPK +  +D+AY IHT++G K   AKVNG +V  T  L  
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445

Query: 617 AEVVEIITYNVSFS 630
            + VEII    SF 
Sbjct: 446 GDQVEIIANPNSFG 459


>gi|366053217|ref|ZP_09450939.1| (p)ppGpp synthetase I SpoT/RelA [Lactobacillus suebicus KCTC 3549]
          Length = 728

 Score =  330 bits (846), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 193/488 (39%), Positives = 285/488 (58%), Gaps = 47/488 (9%)

Query: 141 LSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDT 200
           ++   ++LV  A   A  AH+ Q+RRSGEP+IIHPV+VA IL +L +D E++ AG LHD 
Sbjct: 1   MNAEHVKLVESAYHFADTAHNDQRRRSGEPYIIHPVQVAGILAKLHMDPETVVAGYLHDI 60

Query: 201 VEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAM 260
           VEDT VV  E + E FG  V  IV+G+TK+SK+ K K   E        A++ R++ LAM
Sbjct: 61  VEDTGVV-LEDVRELFGPEVAMIVDGDTKLSKI-KYKSNKEQ------MAENHRKLLLAM 112

Query: 261 TEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLS 320
           ++++RV+IVKLADRLHNMRTL H+ P KQ  IA ETL+++AP+A  LG+  IK ELE+LS
Sbjct: 113 SKDIRVMIVKLADRLHNMRTLQHLRPDKQRRIANETLEIYAPIADRLGISTIKWELEDLS 172

Query: 321 FMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEP 380
             Y N + Y ++   V  +    ++ +E  N+ +    +  + LDL    TEI    K  
Sbjct: 173 LRYLNPQQYYRI---VHLMNSRRDQRIEYINRAIDDIKDAIKDLDLGN-GTEIYGRPKHI 228

Query: 381 YSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIP 440
           YSIY+ ++      +++  +  +R++++              + CY VLG +H  WTP+P
Sbjct: 229 YSIYRKMVTKHKQFSQIYDLLAIRVVVESI------------KDCYAVLGAIHTSWTPMP 276

Query: 441 RAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFV 500
              KDYIA PK NGYQSLHTT++         LEVQIRT EM  +AE G+AAH++ +   
Sbjct: 277 GRFKDYIAMPKVNGYQSLHTTVVG---PEGRPLEVQIRTHEMHEVAELGVAAHWAYK--- 330

Query: 501 TGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDL 560
                          G+T  +  ++   +++    I E Q E   +  + EF+  +  D+
Sbjct: 331 --------------EGRTNGVKQSDSGNKLNLFKEILELQSE---SSDADEFMQGVQGDI 373

Query: 561 LGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVV 620
              RV+ FTP+G++  LPKGA  +D AY IHTE+GNK   AKVNG +V   + + N ++V
Sbjct: 374 FADRVYAFTPKGDVLELPKGAGPLDMAYTIHTEVGNKTTGAKVNGKIVPLDYEIKNGDIV 433

Query: 621 EIITYNVS 628
           +I+T + S
Sbjct: 434 DILTSSSS 441


>gi|429727583|ref|ZP_19262348.1| putative GTP diphosphokinase [Peptostreptococcus anaerobius VPI
           4330]
 gi|429151973|gb|EKX94811.1| putative GTP diphosphokinase [Peptostreptococcus anaerobius VPI
           4330]
          Length = 739

 Score =  330 bits (846), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 194/485 (40%), Positives = 288/485 (59%), Gaps = 50/485 (10%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           +Y    + + V RA  LA +AHDGQ R+SGEP+IIHP+ VA IL +++LD ++I  G+LH
Sbjct: 15  TYAPHADFDKVVRAYELAEKAHDGQVRKSGEPYIIHPLAVANILADMQLDMDTICGGILH 74

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT     + IEE FG  V  +V+G   V+KLGK++   +  S    ++++LR+MFL
Sbjct: 75  DVVEDTEYEESD-IEEMFGKDVAVLVDG---VTKLGKIQYMTKEES----QSENLRKMFL 126

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM +++RVI++KLADRLHNMRTL +M  +K    A ETL ++A +A  LG+  IK ELE+
Sbjct: 127 AMAKDMRVILIKLADRLHNMRTLEYMDSNKARYKARETLDIYAGIAHRLGIQTIKWELED 186

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
           LS  + + E Y  + ++V    K  ++E   AN + M K +  Q    M + +++    K
Sbjct: 187 LSLRFLDPEGYYSLVKKVNK--KREQRECYIANIVDMLKGKFQQ----MEIPSDVYGRPK 240

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIY+ + K   S +E+  +  +RII+               + CY VLG+VH +W P
Sbjct: 241 HFYSIYRKMKKKNKSFDEIYDLTAVRIIV------------DTVKDCYGVLGVVHTLWKP 288

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PKPN YQSLHTT+I    E    +E+QIRT+EM  +AE G AAH+  + 
Sbjct: 289 MPGRFKDYIAMPKPNMYQSLHTTVIGADGEP---VEIQIRTKEMHQVAEYGFAAHWKYKE 345

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
            VT               K V    + +  ++ W   + EW+++        EF+D +  
Sbjct: 346 GVT--------------DKDV----SALDEKLQWFRMMMEWEKDV---KDPHEFLDALKD 384

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           D+L  +V+VFTP+GE+  LP G+T +D+AY IH+++GN  V AKVNG +V   H+L N +
Sbjct: 385 DVLTYQVYVFTPQGEVIELPTGSTTIDFAYRIHSKVGNSCVGAKVNGRIVPLDHILKNGD 444

Query: 619 VVEII 623
           +VEI+
Sbjct: 445 IVEIL 449


>gi|354565208|ref|ZP_08984383.1| (p)ppGpp synthetase I, SpoT/RelA [Fischerella sp. JSC-11]
 gi|353549167|gb|EHC18609.1| (p)ppGpp synthetase I, SpoT/RelA [Fischerella sp. JSC-11]
          Length = 758

 Score =  330 bits (845), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 192/478 (40%), Positives = 283/478 (59%), Gaps = 50/478 (10%)

Query: 148 LVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVV 207
           L+ RA   A++ H GQ R+SGEP+I HP+ VA +L +L      IAAG LHD VEDT+V 
Sbjct: 44  LICRAFEFAYQLHQGQYRKSGEPYICHPIAVAGMLRDLGGSAAMIAAGFLHDVVEDTDV- 102

Query: 208 TFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVI 267
           T E IE+ FG+ VR +VEG TK+SK+   K K E+      +A++ R+MFLAM +++RVI
Sbjct: 103 TIEEIEQRFGSEVRCLVEGVTKLSKIN-FKSKTES------QAENFRRMFLAMAQDIRVI 155

Query: 268 IVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAE 327
           +VKLADRLHNMRTL +MP  K+   ATET ++FAPLA  LG+++ K ELE+L+F Y   E
Sbjct: 156 VVKLADRLHNMRTLEYMPEEKRRRTATETREIFAPLANRLGIWRFKWELEDLAFKYLEPE 215

Query: 328 DYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAV 387
            + ++++ V++   + E+ L++ ++ L  ++ +     L     +I    K  YSIY+ +
Sbjct: 216 AFRQIQQLVSEKRTDREERLKKISETLRTRLAEAGIRCL-----DISGRPKHLYSIYQKM 270

Query: 388 LKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYI 447
            +     +E+  +A LRII++              + CY  L +VH ++ PIP   KDYI
Sbjct: 271 QRQNKEFHEIYDLAALRIIVQ------------TNEECYRALAVVHDVFRPIPGRFKDYI 318

Query: 448 ATPKPNGYQSLHTTLI-PFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGH 506
             PKPN YQSLHT +I P+       LEVQIRT EM  +AE GIAAH+            
Sbjct: 319 GLPKPNRYQSLHTGVIGPWGRP----LEVQIRTMEMHHVAEYGIAAHWK----------- 363

Query: 507 ARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSRVF 566
            +  G S  G T          + +WL  + EWQ +      ++E++++I  +L    ++
Sbjct: 364 YKETGGSHTGLTASDE------KFTWLRQLLEWQSDL---KDAQEYLESIKDNLFEEDIY 414

Query: 567 VFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
           VFTP+G++  L  G+T VD+AY IHTE+GN+    +VNG +V  +  L N ++VEIIT
Sbjct: 415 VFTPKGDLVALKPGSTTVDFAYRIHTEVGNRCTGVRVNGRMVPLSTRLQNGDIVEIIT 472


>gi|418965552|ref|ZP_13517319.1| RelA/SpoT family protein [Streptococcus constellatus subsp.
           constellatus SK53]
 gi|383342204|gb|EID20437.1| RelA/SpoT family protein [Streptococcus constellatus subsp.
           constellatus SK53]
          Length = 738

 Score =  330 bits (845), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 190/494 (38%), Positives = 291/494 (58%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YLS  ++ L+++AL  A + H GQ R+SGEP+IIHP++VA IL +L+LD  S+A G 
Sbjct: 16  TRKYLSSEDVTLIQKALFYAVDRHRGQFRQSGEPYIIHPIQVAGILAKLKLDAVSVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT   T + +E EFG  VR IV+G   V+KLGK+K  +    +    A++ R+M
Sbjct: 76  LHDVVEDT-AATLDDLEGEFGHDVRVIVDG---VTKLGKVKYMSHEEQL----AENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM++++RVI+VKLADRLHNMRTL H+   KQ  I+ ET++++APLA  LG+  +K EL
Sbjct: 128 LMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISSVKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+L+F Y N  ++ K    ++ L KE  +E E+    ++ KIE   +     +  +I   
Sbjct: 188 EDLAFRYLNPTEFYK----ISHLMKEKRREREDLVDEVVHKIE--TYASERNLHGQIYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSIY+ +   +   +E+  +  +R I+              Q   Y +LG +H +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFDEIYDLIAIRCIL------------DTQSDVYAMLGYIHELW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA  K NGYQS+HTT    +Y     +E QIRT+EM  +AE G+AAH++ 
Sbjct: 290 RPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  + G V                 ++   A+ ++W+  + E Q++   +  +++FVD++
Sbjct: 346 KKGIKGQV-----------------DSKESAIGMNWIKEMMELQDQ---SNDAQDFVDSV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             + L   ++VFTP G +++LPK +  +D+AY IHT++G K V AKVNG +V  T  L  
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKAVGAKVNGRMVPLTTKLKT 445

Query: 617 AEVVEIITYNVSFS 630
            + VEIIT + SF 
Sbjct: 446 GDQVEIITSSNSFG 459


>gi|332981509|ref|YP_004462950.1| (p)ppGpp synthetase I SpoT/RelA [Mahella australiensis 50-1 BON]
 gi|332699187|gb|AEE96128.1| (p)ppGpp synthetase I, SpoT/RelA [Mahella australiensis 50-1 BON]
          Length = 719

 Score =  330 bits (845), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 191/486 (39%), Positives = 288/486 (59%), Gaps = 53/486 (10%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           SY S  ++E + +A   A  AH GQ R SGE +IIHPV+VA IL +L +D  +I AGLLH
Sbjct: 12  SYTS-EDVEYINKAYEFAENAHRGQARVSGEAYIIHPVQVALILADLGMDASTICAGLLH 70

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D +EDT+  T++ + + FG  +  +VEG   V+KLGKL    E  S ++ +A++LR+MF+
Sbjct: 71  DVLEDTDY-TYDDLAKLFGKEIADLVEG---VTKLGKL----EFQSKKEAQAENLRKMFI 122

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM ++VRVI++KLADRLHNMRTL ++    Q   A ET++++APLA  LG+++IK ELE+
Sbjct: 123 AMAKDVRVIMIKLADRLHNMRTLRYLDKESQLRNAQETMEIYAPLAHRLGIFKIKWELED 182

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
           LS  Y + E Y  +  +VA   K+ E+ + +    L ++I +        ++  +    K
Sbjct: 183 LSLRYLDPEAYYDLVDKVAAKRKQREEYINQVITALKERIAE------TGIEATVDGRPK 236

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIYK +     +  ++  +  +R+I+            +  + CY VLGL+H IW P
Sbjct: 237 HFYSIYKKMKYQGKAFEQIYDLMAVRVIV------------NTVRDCYAVLGLIHTIWKP 284

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           IP   KDYIA PKPN YQSLHTT++    E    +E+Q+RT +M   AE GIAAH+  + 
Sbjct: 285 IPGRFKDYIAVPKPNMYQSLHTTVVGPQGEP---VEIQVRTWDMHRTAEYGIAAHWKYK- 340

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                       GR        L N ++  +++WL  I EWQ +   +  + EFV+++  
Sbjct: 341 -----------EGR--------LKNTDLDSKLAWLRQILEWQSD---DRDADEFVESLKV 378

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           DL    V VFTP+G++ +LPKG+T +D+AY IH+ +GN+ + AKVNG +V     L   +
Sbjct: 379 DLFSDEVLVFTPKGDVIDLPKGSTPLDFAYAIHSAVGNRCIGAKVNGKIVPLDSELQTGD 438

Query: 619 VVEIIT 624
           +VEI+T
Sbjct: 439 IVEILT 444


>gi|220907977|ref|YP_002483288.1| (p)ppGpp synthetase I SpoT/RelA [Cyanothece sp. PCC 7425]
 gi|219864588|gb|ACL44927.1| (p)ppGpp synthetase I, SpoT/RelA [Cyanothece sp. PCC 7425]
          Length = 748

 Score =  330 bits (845), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 197/479 (41%), Positives = 284/479 (59%), Gaps = 48/479 (10%)

Query: 147 ELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNV 206
           ELV RA   A+  H GQ+R SGEP+I HPV VA +L +L      +AAG LHD +EDT  
Sbjct: 38  ELVCRAFNFAYRLHQGQRRASGEPYIAHPVAVAGLLRDLGGSAAMVAAGFLHDVIEDT-T 96

Query: 207 VTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRV 266
           VT E++E EFG  VR++VEG TK+SK+        N S  + +A+  R+MFLAM +++RV
Sbjct: 97  VTPEQLEAEFGPEVRQLVEGVTKLSKI--------NFSKTERQAESFRRMFLAMAQDIRV 148

Query: 267 IIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNA 326
           I VKLADRLHNMRTL ++P  K+  IA ET  VFAPLA  LG+++ K ELE+LSF Y   
Sbjct: 149 IFVKLADRLHNMRTLEYLPEEKRRRIAQETRDVFAPLANRLGIWRFKWELEDLSFKYLEP 208

Query: 327 EDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKA 386
           E Y +++  VA+     E +LE+A  IL +++   Q L+L   + ++    K  YSIY+ 
Sbjct: 209 EAYRRMQDLVAEKRGIREAQLEDAIAILRQQL---QPLNLK--RCDLSGRPKHLYSIYQK 263

Query: 387 VLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDY 446
           + + +   +E+  IA +R+I++ K              CY VL +VH  + P+P   KDY
Sbjct: 264 MERQQKEFHEIYDIAAIRVIVETK------------DECYRVLAIVHDCFKPVPNRFKDY 311

Query: 447 IATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGH 506
           I  PKPN YQSLHT +I    +    LEVQIRT EM  +AE GIAAH+  +      VGH
Sbjct: 312 IGLPKPNRYQSLHTVVID---QGGRPLEVQIRTMEMHRVAEYGIAAHWKYKE-----VGH 363

Query: 507 ARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSRVF 566
           +        G+ +   +     +  WL  + + Q +      ++E++D++  +L  + V+
Sbjct: 364 S-------LGQHLTTADE----KFVWLRQLLDTQNDL---KDAQEYLDSLKDNLFDNDVY 409

Query: 567 VFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITY 625
           VFTP+G++  L +GAT VD+AY IHTE+GN     KVN  +V+    L N ++VEI+T+
Sbjct: 410 VFTPQGDVITLHQGATAVDFAYRIHTEVGNHCAGVKVNDRMVTLDTPLHNGDIVEILTH 468


>gi|289423171|ref|ZP_06424986.1| GTP diphosphokinase [Peptostreptococcus anaerobius 653-L]
 gi|289156502|gb|EFD05152.1| GTP diphosphokinase [Peptostreptococcus anaerobius 653-L]
          Length = 739

 Score =  330 bits (845), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 194/485 (40%), Positives = 288/485 (59%), Gaps = 50/485 (10%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           +Y    + + V RA  LA +AHDGQ R+SGEP+IIHP+ VA IL +++LD ++I  G+LH
Sbjct: 15  TYAPHADFDKVVRAYELAEKAHDGQVRKSGEPYIIHPLAVANILADMQLDMDTICGGILH 74

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT     + IEE FG  V  +V+G   V+KLGK++   +  S    ++++LR+MFL
Sbjct: 75  DVVEDTEYEESD-IEEMFGKDVAVLVDG---VTKLGKIQYMTKEES----QSENLRKMFL 126

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM +++RVI++KLADRLHNMRTL +M  +K    A ETL ++A +A  LG+  IK ELE+
Sbjct: 127 AMAKDMRVILIKLADRLHNMRTLEYMDSNKARYKARETLDIYAGIAHRLGIQTIKWELED 186

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
           LS  + + E Y  + ++V    K  ++E   AN + M K +  Q    M + +++    K
Sbjct: 187 LSLRFLDPEGYYSLVKKVNK--KREQRECYIANIVDMLKGKFQQ----MEIPSDVYGRPK 240

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIY+ + K   S +E+  +  +RII+               + CY VLG+VH +W P
Sbjct: 241 HFYSIYRKMKKKNKSFDEIYDLTAVRIIV------------DTVKDCYGVLGVVHTLWKP 288

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PKPN YQSLHTT+I    E    +E+QIRT+EM  +AE G AAH+  + 
Sbjct: 289 MPGRFKDYIAMPKPNMYQSLHTTVIGADGEP---VEIQIRTKEMHQVAEYGFAAHWKYKE 345

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
            VT               K V    + +  ++ W   + EW+++        EF+D +  
Sbjct: 346 GVT--------------DKDV----SALDEKLQWFRMMMEWEKDV---KDPHEFLDALKD 384

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           D+L  +V+VFTP+GE+  LP G+T +D+AY IH+++GN  V AKVNG +V   H+L N +
Sbjct: 385 DVLTYQVYVFTPQGEVIELPTGSTTIDFAYRIHSKVGNSCVGAKVNGRIVPLDHILKNGD 444

Query: 619 VVEII 623
           +VEI+
Sbjct: 445 IVEIL 449


>gi|423069352|ref|ZP_17058139.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           intermedius F0395]
 gi|355364792|gb|EHG12520.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           intermedius F0395]
          Length = 738

 Score =  330 bits (845), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 190/494 (38%), Positives = 291/494 (58%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YLS  ++ L+++AL  A + H GQ R+SGEP+IIHP++VA IL +L+LD  S+A G 
Sbjct: 16  TRKYLSSEDVTLIQKALFYAVDRHRGQFRQSGEPYIIHPIQVAGILAKLKLDAVSVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT   T + +E EFG  VR IV+G   V+KLGK+K  +    +    A++ R+M
Sbjct: 76  LHDVVEDT-AATLDDLEGEFGHDVRLIVDG---VTKLGKVKYMSHEEQL----AENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM++++RVI+VKLADRLHNMRTL H+   KQ  I+ ET++++APLA  LG+  +K EL
Sbjct: 128 LMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISSVKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+L+F Y N  ++ K    ++ L KE  +E E+    ++ KIE   +     +  +I   
Sbjct: 188 EDLAFRYLNPTEFYK----ISHLMKEKRREREDLVDEVVHKIE--TYASERNLHGQIYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSIY+ +   +   +E+  +  +R I+              Q   Y +LG +H +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFDEIYDLIAIRCIL------------DTQSDVYAMLGYIHELW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA  K NGYQS+HTT    +Y     +E QIRT+EM  +AE G+AAH++ 
Sbjct: 290 RPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  + G V                 ++   A+ ++W+  + E Q++   +  +++FVD++
Sbjct: 346 KKGIKGQV-----------------DSKESAIGMNWIKEMMELQDQ---SNDAQDFVDSV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             + L   ++VFTP G +++LPK +  +D+AY IHT++G K V AKVNG +V  T  L  
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKAVGAKVNGRMVPLTTKLKT 445

Query: 617 AEVVEIITYNVSFS 630
            + VEIIT + SF 
Sbjct: 446 GDQVEIITSSNSFG 459


>gi|302335523|ref|YP_003800730.1| (p)ppGpp synthetase I SpoT/RelA [Olsenella uli DSM 7084]
 gi|301319363|gb|ADK67850.1| (p)ppGpp synthetase I, SpoT/RelA [Olsenella uli DSM 7084]
          Length = 781

 Score =  330 bits (845), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 194/497 (39%), Positives = 295/497 (59%), Gaps = 46/497 (9%)

Query: 131 WEDLRPT-ISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILG-ELELD 188
           W  LR T ++YL    L  +  A   A + H  Q+RRSGEP+I HPVEVA IL  +L++D
Sbjct: 22  WRVLRNTCVTYLDAEALAKIDAAYSFAADFHRDQRRRSGEPYINHPVEVALILAKDLKMD 81

Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
            + I A LLHDTVEDT+  T + + E FGATV  +V+G TK++ +       E  S+ + 
Sbjct: 82  EDPICAALLHDTVEDTSA-TLDDLTERFGATVAELVDGVTKLTSI-------EVSSMDEK 133

Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
           +A +LR+MFLAM++++RV+I+KLADRLHNMRTL+ +PP ++   A ET+ V+APLA  LG
Sbjct: 134 QALNLRKMFLAMSKDIRVVIIKLADRLHNMRTLAALPPDRRVFKARETMDVYAPLADRLG 193

Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
           +  IK ELE+L+F Y N ++Y ++ R V +   + E+  +EA K L      D+   +  
Sbjct: 194 ISSIKWELEDLAFFYLNPDEYERIARMVQESRAQREQNTDEAIKTL-----GDELARVGI 248

Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
              +I    K  +SIY+ + +      ++  +  +R++ +      VG        CY  
Sbjct: 249 TGFQIHGRPKHLWSIYQKMTRKGKKFTDIYDLIAIRVLTE-----SVGD-------CYST 296

Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAER 488
           LG VH +W P+P   KDYIA PKPNGYQSLHTT+I F       +E+QIRT EM   AE 
Sbjct: 297 LGAVHTVWHPLPGRFKDYIAMPKPNGYQSLHTTVIGF---DARPIEIQIRTFEMHSQAEY 353

Query: 489 GIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREW-QEEFVGNM 547
           GIAAH+  +            +GR  R      + A++  +I+W+    +W  +E +G+ 
Sbjct: 354 GIAAHWLYK-------KSGNSSGRMSR------DEADVDSQINWIRRSLDWATDEEMGD- 399

Query: 548 TSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNL 607
              E+++++  +L    +FVFTP+GE+ +L + +T +D+AY +HTE+GN  V AKVNG++
Sbjct: 400 -PHEYLNSLRVELFEDEIFVFTPKGEVMSLRRDSTPLDFAYAVHTEVGNHCVGAKVNGSV 458

Query: 608 VSPTHVLANAEVVEIIT 624
              T+ L + + +EI+T
Sbjct: 459 APLTYRLQSGDRIEILT 475


>gi|225593179|gb|ACN96096.1| (p)ppGpp synthetase I [Fischerella sp. MV11]
          Length = 758

 Score =  330 bits (845), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 192/478 (40%), Positives = 283/478 (59%), Gaps = 50/478 (10%)

Query: 148 LVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVV 207
           L+ RA   A++ H GQ R+SGEP+I HP+ VA +L +L      IAAG LHD VEDT+V 
Sbjct: 43  LICRAFEFAYQLHQGQYRKSGEPYICHPIAVAGMLRDLGGSAAMIAAGFLHDVVEDTDV- 101

Query: 208 TFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVI 267
           T E IE+ FG+ VR +VEG TK+SK+   K K E+      +A++ R+MFLAM +++RVI
Sbjct: 102 TIEEIEQRFGSEVRCLVEGVTKLSKIN-FKSKTES------QAENFRRMFLAMAQDIRVI 154

Query: 268 IVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAE 327
           +VKLADRLHNMRTL +MP  K+   ATET ++FAPLA  LG+++ K ELE+L+F Y   E
Sbjct: 155 VVKLADRLHNMRTLEYMPDEKRRRTATETREIFAPLANRLGIWRFKWELEDLAFKYLEPE 214

Query: 328 DYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAV 387
            + ++++ V++   + E+ L++ ++ L  ++ +     L     +I    K  YSIY+ +
Sbjct: 215 AFRQIQQLVSEKRTDREERLKKISETLRTRLAEAGIRCL-----DISGRPKHLYSIYQKM 269

Query: 388 LKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYI 447
            +     +E+  +A LRII++              + CY  L +VH ++ PIP   KDYI
Sbjct: 270 QRQNKEFHEIYDLAALRIIVQ------------TNEECYRALAVVHDVFRPIPGRFKDYI 317

Query: 448 ATPKPNGYQSLHTTLI-PFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGH 506
             PKPN YQSLHT +I P+       LEVQIRT EM  +AE GIAAH+            
Sbjct: 318 GLPKPNRYQSLHTGVIGPWGRP----LEVQIRTMEMHHVAEYGIAAHWK----------- 362

Query: 507 ARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSRVF 566
            +  G S  G T          + +WL  + EWQ +      ++E++++I  +L    ++
Sbjct: 363 YKETGGSHTGLTASDE------KFTWLRQLLEWQSDL---KDAQEYLESIKDNLFEEDIY 413

Query: 567 VFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
           VFTP+G++  L  G+T VD+AY IHTE+GN+    +VNG +V  +  L N ++VEIIT
Sbjct: 414 VFTPKGDLVALKPGSTTVDFAYRIHTEVGNRCTGVRVNGRMVPLSTRLQNGDIVEIIT 471


>gi|269792823|ref|YP_003317727.1| (p)ppGpp synthetase I SpoT/RelA [Thermanaerovibrio acidaminovorans
           DSM 6589]
 gi|269100458|gb|ACZ19445.1| (p)ppGpp synthetase I, SpoT/RelA [Thermanaerovibrio acidaminovorans
           DSM 6589]
          Length = 756

 Score =  330 bits (845), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 196/485 (40%), Positives = 287/485 (59%), Gaps = 53/485 (10%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           YL   +L  +  AL+ A  AH  Q+R SGEP+I+H + VA IL ++ LD E+++A LLHD
Sbjct: 50  YLDRQDLMKLGEALVFAANAHREQRRHSGEPYIVHSISVAAILADMGLDVETLSAALLHD 109

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            +EDT V   E +   FG  V  +V+G   V+KLGKL  K    S++D +A++LR+MFL 
Sbjct: 110 VLEDTEVGK-EEMLSRFGEGVLTMVDG---VTKLGKLAFK----SMEDYQAENLRKMFLV 161

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M +++RV+++KLADRLHNMRTL      KQ +IA ETL+++APLA  LG+Y +K ELE+L
Sbjct: 162 MAKDIRVVLIKLADRLHNMRTLQAHRRDKQITIAKETLEIYAPLAHRLGIYNVKRELEDL 221

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
            F     + Y +++RRV     E E  +++A  +L  K++++       ++  +    K 
Sbjct: 222 CFKILEPDIYYEIRRRVRKKLPEREAIIKQALDVLQGKLKEE------GIEAYLSGRPKH 275

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIY+ + +   S++++  +  LR+I        VG +      CY VLGLVH IW PI
Sbjct: 276 FYSIYEKMRRKNLSLDQLYDLLALRVI--------VGTVAE----CYQVLGLVHTIWKPI 323

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P    DYIA PK N YQSLHTT+   L  S   LEVQIRT EM  +AE G+AAH+     
Sbjct: 324 PGQFDDYIANPKSNMYQSLHTTV---LGPSGEPLEVQIRTWEMHWLAEYGVAAHW----- 375

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
                 H +   R             I  ++SW+  + E Q+E     +  EF+D++  D
Sbjct: 376 ------HYKEGKR---------RVDQIDQKLSWIRQVLETQQEG----SPAEFLDSLKTD 416

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           +L S V VFTP+G++ +LP G+T +D+AY IHTE+G+K V A VNG +V   H L+N ++
Sbjct: 417 VLTSEVLVFTPKGDVVSLPNGSTPIDFAYAIHTEVGHKCVGAMVNGRIVPMDHKLSNGDI 476

Query: 620 VEIIT 624
           V ++T
Sbjct: 477 VRVLT 481


>gi|402571498|ref|YP_006620841.1| RelA/SpoT family (p)ppGpp synthetase [Desulfosporosinus meridiei
           DSM 13257]
 gi|402252695|gb|AFQ42970.1| (p)ppGpp synthetase, RelA/SpoT family [Desulfosporosinus meridiei
           DSM 13257]
          Length = 744

 Score =  330 bits (845), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 192/479 (40%), Positives = 285/479 (59%), Gaps = 35/479 (7%)

Query: 146 LELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTN 205
           L +V +A   A  AH  Q R SGE +I+HP+EVA+IL ELE+D  +IAA LLHD VEDT 
Sbjct: 19  LAIVDKAYHFAEVAHRNQLRNSGEDYILHPLEVAQILVELEMDEATIAASLLHDVVEDTE 78

Query: 206 VVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVR 265
             T   IE+EFG+ +  +V+G   V+KLG+++ K    S  + + ++LR+MFLAM +++R
Sbjct: 79  F-TIADIEKEFGSEIALLVDG---VTKLGRIEYK----SKVEQQVENLRKMFLAMAKDIR 130

Query: 266 VIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTN 325
           VI++KLADRLHNMRTL +    KQ  IA ETL++FAPLA  LG+++IK ELE+LSF Y  
Sbjct: 131 VILIKLADRLHNMRTLKYHSEQKQKEIAQETLEIFAPLANRLGIFRIKWELEDLSFRYLK 190

Query: 326 AEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYK 385
            ++Y  +   +A   +E E  +   N+++++  E    LD + +  +I    K  YSIY+
Sbjct: 191 PQEYYDLVEGIALKRREREAYI---NEVIVQMRER---LDEVEIFADIAGRPKHFYSIYR 244

Query: 386 AVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKD 445
            +      ++E+  +  +R+I+                 CY  LG++H +W PIP   KD
Sbjct: 245 KMTTQNKDLSEIYDLMAIRVIV------------DSVNDCYGALGIIHTMWKPIPGRFKD 292

Query: 446 YIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVG 505
           YIA PKPN YQSLHTTLI    E     E+QIRT EM   +E GIAAH+  +        
Sbjct: 293 YIAMPKPNMYQSLHTTLIGLHGEP---FEIQIRTCEMHRTSEYGIAAHWKYKEGSNKECA 349

Query: 506 HARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSRV 565
               +G+    KT  +   N   ++SWL  + EWQ +   +  + EF++++  DL    V
Sbjct: 350 TKGSSGKDCGNKTTSV---NFEQKLSWLRQLLEWQHD---SRDAGEFMESLKIDLFADTV 403

Query: 566 FVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
           FVFTP+G++  LP  +  VD+AY +HT++G++ V AK+NG +V     L N +++EI+T
Sbjct: 404 FVFTPKGDVVELPADSCPVDFAYRVHTDVGHRCVGAKINGRIVPLETKLNNGDILEILT 462


>gi|319892687|ref|YP_004149562.1| GTP pyrophosphokinase [Staphylococcus pseudintermedius HKU10-03]
 gi|386319104|ref|YP_006015267.1| GTP pyrophosphokinase [Staphylococcus pseudintermedius ED99]
 gi|317162383|gb|ADV05926.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Staphylococcus
           pseudintermedius HKU10-03]
 gi|323464275|gb|ADX76428.1| GTP pyrophosphokinase [Staphylococcus pseudintermedius ED99]
          Length = 729

 Score =  330 bits (845), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 190/503 (37%), Positives = 291/503 (57%), Gaps = 49/503 (9%)

Query: 127 PERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELE 186
           P  + E L     YL   + E V ++  +A++AH+GQ R++G P+I+HP++VA IL E+ 
Sbjct: 6   PYSVDEVLHKAKQYLDKEQYEYVLKSYHIAYKAHEGQFRKNGLPYIMHPIQVAGILTEMH 65

Query: 187 LDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQ 246
           LD  +I AG LHD +EDT   TF+ + E F   +  IV+G TK+ K+ K + K E     
Sbjct: 66  LDGPTIVAGFLHDVIEDTPY-TFDDVAEMFNVEIATIVDGVTKLKKV-KYRSKEEQ---- 119

Query: 247 DVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKL 306
             +A++ R++F+A+ ++VRVI+VKLADRLHNMRTL  MP  KQ  I+ ETL+++APLA  
Sbjct: 120 --QAENHRKLFIAIAKDVRVILVKLADRLHNMRTLRAMPREKQIRISKETLEIYAPLAHR 177

Query: 307 LGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDL 366
           LG+  IK ELE+++  Y +   Y ++   +     E E  +E A + + K+      +D+
Sbjct: 178 LGINTIKWELEDIALRYIDNVQYFRIVNLMKKKRSEREAYIENAIENIRKE------MDI 231

Query: 367 MTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICY 426
           M +  +I    K  YSIY+ ++K +   +++  +  +R+I+               + CY
Sbjct: 232 MDIAGDINGRPKHIYSIYRKMMKQKKQFDQIFDLLAVRVIV------------HSIKDCY 279

Query: 427 HVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIA 486
            VLGLVH +W P+P   KDYIA PK N YQSLHTT++     +   LE+QIRT EM  IA
Sbjct: 280 AVLGLVHTLWKPMPGRFKDYIAMPKQNMYQSLHTTVVG---PNGDPLEIQIRTFEMHEIA 336

Query: 487 ERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGN 546
           E G+AAH++ +                  GK V  +N N   +++WL  I E       +
Sbjct: 337 EHGVAAHWAYK-----------------EGKQVDKDNENYNKKLNWLKDIAETDH---TS 376

Query: 547 MTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGN 606
             ++EF++++  DL   +V+ FTP  ++  LP GA  +D+AY IH+E+GNKM+ AKVNG 
Sbjct: 377 SDAQEFIESMKFDLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGK 436

Query: 607 LVSPTHVLANAEVVEIITYNVSF 629
           +V   +VL   ++VEI T   S+
Sbjct: 437 IVPIDYVLQTGDIVEIRTSKHSY 459


>gi|111657862|ref|ZP_01408576.1| hypothetical protein SpneT_02000960 [Streptococcus pneumoniae
           TIGR4]
          Length = 740

 Score =  330 bits (845), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 189/494 (38%), Positives = 289/494 (58%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YL+  ++  V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD  ++A G 
Sbjct: 16  TKEYLTEEDVHFVHKALVYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT+  T + +E EFG  VR IV+G   V+KLGK++ K    S+++  A++ R+M
Sbjct: 76  LHDVVEDTDA-TLDDLEREFGPDVRMIVDG---VTKLGKVEYK----SIEEQLAENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM+E++RVI+ KL+DRLHNMRTL H+   KQ  I+ ET++++APLA  LG+  +K EL
Sbjct: 128 LMAMSEDIRVILFKLSDRLHNMRTLKHLRKDKQERISKETMEIYAPLAHRLGISSVKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y N  ++ K+   + +  +E E  ++E    ++ K+E  ++     +K +I   
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLE--EYTTERHLKGKIYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSI++ +   R    E+  +  +R I+              Q   Y +LG VH  W
Sbjct: 242 PKHIYSIFRKMQDKRKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHEFW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA  K NGYQS+HTT    +Y     +E QIRT+EM  +AE G+AAH++ 
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  + G V                 N+   A+ ++W+  + E Q++      ++EFVD++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDSV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             + L   ++VFTP G +++LPK +  +D+AY IHT++G K   AKVNG +V  T  L  
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445

Query: 617 AEVVEIITYNVSFS 630
            + VEII    SF 
Sbjct: 446 GDQVEIIANPNSFG 459


>gi|418977993|ref|ZP_13525798.1| RelA/SpoT family protein [Streptococcus mitis SK575]
 gi|383348757|gb|EID26714.1| RelA/SpoT family protein [Streptococcus mitis SK575]
          Length = 740

 Score =  330 bits (845), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 189/494 (38%), Positives = 289/494 (58%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YL+  ++  V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD  ++A G 
Sbjct: 16  TKEYLTEEDVHFVHKALVYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT+  T + +E EFG  VR IV+G   V+KLGK+K K+    +    A++ R+M
Sbjct: 76  LHDVVEDTDA-TLDDLEREFGPDVRVIVDG---VTKLGKVKYKSHEEQL----AENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM+E++RVI+VKL+DRLHNMRTL H+   KQ  I+ ET++++APLA  LG+  +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISKETMEIYAPLAHRLGISSVKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y N  ++ K+   + +  +E E  ++E    ++ K+E  ++     ++ +I   
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLE--EYTTDHHLRGKIYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSI++ +   R    E+  +  +R I+              Q   Y +LG VH +W
Sbjct: 242 PKHIYSIFRKMQDKRKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHELW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA  K NGYQS+HTT    +Y     +E QIRT+ M  +AE G+AAH++ 
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKAMHEVAEYGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  V G V                 N+   A+ ++W+  + E Q++      ++EFVD++
Sbjct: 346 KKGVKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDSV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             + L   ++VFTP G +++LPK +  +D+AY IHT++G K   AKVNG +V  T  L  
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445

Query: 617 AEVVEIITYNVSFS 630
            + VEI+T   SF 
Sbjct: 446 GDQVEIVTNPNSFG 459


>gi|434402920|ref|YP_007145805.1| (p)ppGpp synthetase, RelA/SpoT family [Cylindrospermum stagnale PCC
           7417]
 gi|428257175|gb|AFZ23125.1| (p)ppGpp synthetase, RelA/SpoT family [Cylindrospermum stagnale PCC
           7417]
          Length = 756

 Score =  330 bits (845), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 192/480 (40%), Positives = 281/480 (58%), Gaps = 53/480 (11%)

Query: 148 LVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVV 207
           L+ RA   A++ H GQ R+SGEP+I HPV VA +L +L      IAAG LHD VEDT V 
Sbjct: 43  LICRAFQFAYQLHQGQYRKSGEPYIGHPVAVAGLLRDLGGSPAMIAAGFLHDVVEDTEV- 101

Query: 208 TFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVI 267
           T ++IEE FG  VR++VEG TK+SK+   K K E+      +A++ R+MFLAM +++RVI
Sbjct: 102 TIDQIEERFGPEVRQLVEGVTKLSKIN-FKSKTES------QAENFRRMFLAMAQDIRVI 154

Query: 268 IVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAE 327
           +VKLADRLHNMRTL  MP  K+  IA ET  +FAPLA  LG++Q K ELE+L+F Y   E
Sbjct: 155 VVKLADRLHNMRTLQFMPDEKRRRIAQETRDIFAPLANRLGIWQFKWELEDLAFKYLEPE 214

Query: 328 DYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAV 387
            + +++  V++     E++L +   IL +++   Q   +  V    R+  K  Y IY+ +
Sbjct: 215 AFRQIQTYVSEKRAAREEKLTKVTDILRQRL---QQAGVRCVDVSGRT--KHLYGIYQKM 269

Query: 388 LKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYI 447
            + +   +E+  +A LRII++              + CY  L +VH  + PIP   KDYI
Sbjct: 270 HRQQKEFHEIYDLAALRIIVQTN------------EECYRALAVVHDAFRPIPGRFKDYI 317

Query: 448 ATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHA 507
             PKPN YQSLHT ++         LEVQIRT+EM  +AE GIAAH+             
Sbjct: 318 GLPKPNRYQSLHTGVMGLTGRP---LEVQIRTQEMHHVAEYGIAAHWK-----------Y 363

Query: 508 RPNGRSPRGKTVCLNNANIA---LRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSR 564
           + +G S        NN+ +     + +WL  + +WQ +      ++E++D++  +L    
Sbjct: 364 KESGGS--------NNSQVTGTDEKFTWLRQLLDWQSDL---KDAQEYLDSVKDNLFEDD 412

Query: 565 VFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
           V+VFTP+G++  L  G+T +D+AY IHTE+GN    A+VNG +V  +  L N ++V+IIT
Sbjct: 413 VYVFTPKGDVVPLSPGSTSIDFAYRIHTEVGNHCAGARVNGRMVPLSTRLQNGDIVDIIT 472


>gi|86609008|ref|YP_477770.1| RelA/SpoT family protein [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|86557550|gb|ABD02507.1| RelA/SpoT family protein [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 760

 Score =  329 bits (844), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 196/494 (39%), Positives = 283/494 (57%), Gaps = 54/494 (10%)

Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
           + LRP     +  E +L+RRA   ++  H GQKR+SG+P+I HPV VA +L EL  D  +
Sbjct: 39  DGLRP----YTAEEADLLRRAFEFSYCLHQGQKRKSGDPYIAHPVAVATLLRELGGDAVT 94

Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
           +AAGLLHD +EDT V T E +E EFG+ VR +VEG TK+SK      K E       +A+
Sbjct: 95  VAAGLLHDVIEDTEV-TPEALEAEFGSEVRLLVEGVTKLSKFN-FSSKTEQ------QAE 146

Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
           + R+MF+AM +++RVI+VKLADRLHNMRTL ++ P KQ  IA ET+++FAPLA  LG++ 
Sbjct: 147 NFRRMFVAMAKDIRVIVVKLADRLHNMRTLQYLSPSKQRQIAAETMEIFAPLANRLGIWH 206

Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
            K ELE+L+F Y + E Y K++  V     E E E++   + L + +     L       
Sbjct: 207 FKWELEDLAFKYLDYEAYRKIQELVNAKRAEREAEIQAFIEELRQNL-----LQAGLEHF 261

Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
           EI    K  YSIY+ + +     +E+  ++ +R+I+                 CY VL +
Sbjct: 262 EISGRPKHLYSIYRKMQQQHKEFHEIYDLSAVRVIVHTNSE------------CYRVLAV 309

Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
           VH  + PIP   KDYI  PK N YQSLHT +I      +   EVQIRTEEM  +AE GIA
Sbjct: 310 VHNCFRPIPGRFKDYIGLPKANRYQSLHTAVIGLQGRPV---EVQIRTEEMHRVAEYGIA 366

Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
           AH+  +   +  V   +P+                  R +WL  + EWQ +   +   +E
Sbjct: 367 AHWKYKEAGSTTV---KPDEE----------------RFTWLRQLLEWQNDLKDD---KE 404

Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
           ++DT+  +L  S V+VFTP+G++  LP+G+  VD+AY IH+EIG+    A+VN  +V   
Sbjct: 405 YLDTLRENLFESEVYVFTPKGDLLALPQGSCPVDFAYRIHSEIGDHCAGARVNNKIVPLD 464

Query: 612 HVLANAEVVEIITY 625
             L N ++V+IIT+
Sbjct: 465 TRLRNGDIVQIITH 478


>gi|222152432|ref|YP_002561607.1| GTP pyrophosphokinase [Streptococcus uberis 0140J]
 gi|222113243|emb|CAR40752.1| GTP pyrophosphokinase [Streptococcus uberis 0140J]
          Length = 739

 Score =  329 bits (844), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 183/492 (37%), Positives = 290/492 (58%), Gaps = 49/492 (9%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           SY++  ++  V++AL  A  AH  Q R+SGEP+IIHP++VA IL +L LD  ++A G LH
Sbjct: 18  SYMNKKDIAFVKKALDYATTAHFYQARKSGEPYIIHPIQVAGILADLHLDATTVACGFLH 77

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT + + + IE EF   VR IV+G   V+KLGK++ K+    +    A++ R+M +
Sbjct: 78  DVVEDTEI-SLDDIEAEFDKDVRDIVDG---VTKLGKVEYKSHEEQL----AENHRKMLM 129

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM++++RVI+VKLADRLHNMRTL H+   KQ  I+ ET++++APLA  LG+ +IK ELE+
Sbjct: 130 AMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELED 189

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
           L+F Y N  ++ K+   + +  +E E  ++E   I+ K +    + +   +  ++    K
Sbjct: 190 LAFRYLNESEFYKISHMMREKRREREALVDE---IVAKIV---TYTNEQGLYGDVYGRPK 243

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIY+ +   +   +++  +  +R +++             Q   Y ++G +H +W P
Sbjct: 244 HIYSIYRKMRDKKKRFDQIFDLIAIRCVME------------TQSDVYAMVGYIHELWRP 291

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PK NGYQS+HTT    +Y     +E+QIRT+EM  +AE G+AAH++ + 
Sbjct: 292 MPGRFKDYIAAPKANGYQSIHTT----VYGPKGPIEIQIRTKEMHQVAEYGVAAHWAYKK 347

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
            V G V                 N  +  + ++W+  + E Q+    N  +++FVD++  
Sbjct: 348 GVKGKV-----------------NQTDQKVGMNWIKDLVELQD--ASNGDAKDFVDSVKE 388

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           D+   R++VFTP G ++ LPK +  +D+AY IHT++G K   AKVNG +V  T  L   +
Sbjct: 389 DIFSERIYVFTPNGAVQELPKDSGPIDFAYAIHTQVGEKATGAKVNGKMVPLTSKLKTGD 448

Query: 619 VVEIITYNVSFS 630
           VVEI+T   SF 
Sbjct: 449 VVEIVTNPNSFG 460


>gi|289450409|ref|YP_003475599.1| putative GTP diphosphokinase [Clostridiales genomosp. BVAB3 str.
           UPII9-5]
 gi|289184956|gb|ADC91381.1| putative GTP diphosphokinase [Clostridiales genomosp. BVAB3 str.
           UPII9-5]
          Length = 771

 Score =  329 bits (844), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 193/481 (40%), Positives = 277/481 (57%), Gaps = 55/481 (11%)

Query: 149 VRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVT 208
           + +A   AF+AH  Q+R++GEP+I HP+ VA IL ELE+D  ++ A LLHDTVEDT   T
Sbjct: 33  LEKAFEYAFQAHIDQRRQTGEPYITHPLTVATILLELEVDQATLVAALLHDTVEDTGT-T 91

Query: 209 FERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVII 268
            E I + FG  V  +V+G TK+ K+          S ++++A++ R+MFLAM +++RV++
Sbjct: 92  LEDIADRFGDDVAALVDGVTKLEKI-------RFSSKEELQAENFRKMFLAMAKDIRVVL 144

Query: 269 VKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAED 328
           +KLADRLHNMRTL  M   KQ  IA ETL ++APLA  LG+Y+ K ELE+L   Y +   
Sbjct: 145 IKLADRLHNMRTLKTMREDKQKRIAQETLDIYAPLAHRLGIYKWKWELEDLCLRYLDRTA 204

Query: 329 YAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAVL 388
           Y ++   +A   +E E+ L+E    L K + +      M +  EI    K  YSIY+ + 
Sbjct: 205 YYELVGAIAQRREERERYLQEIIIDLQKTVAE------MGINAEIEGRPKHFYSIYRKME 258

Query: 389 KSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYIA 448
           K   S++++  +   R+I+                 CY VLGLVH  + PIP   KDYIA
Sbjct: 259 KKHKSLDQIFDLFACRVIV------------DTVVDCYTVLGLVHDRFRPIPGRFKDYIA 306

Query: 449 TPKPNGYQSLHTTL-----IPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGL 503
           TPKPN YQSLHTT+     +PF        E+QIRT EM  +AE GIAAHY    +  G 
Sbjct: 307 TPKPNMYQSLHTTVFGPKGVPF--------EIQIRTFEMHRVAEYGIAAHYR---YKEGK 355

Query: 504 VGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGS 563
            G ARP  +     T          +++WL  + +WQ++      + EF++ +   L+  
Sbjct: 356 TGPARPGSKESANDT----------KLAWLRQLLDWQKDM---KDAGEFMEGLRNGLIED 402

Query: 564 RVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEII 623
            VFVFTPRG++  LP GAT +D+AY IH+ IGN+M  A++N  +      L N ++VEI+
Sbjct: 403 EVFVFTPRGDVICLPIGATPIDFAYNIHSGIGNRMYGARINSRIAPIDTELKNGDIVEIL 462

Query: 624 T 624
           T
Sbjct: 463 T 463


>gi|386085853|ref|YP_006001727.1| GTP pyrophosphokinase / Guanosine-3',5'-bis(Diphosphate)
           3'-pyrophosphohydrolase [Streptococcus thermophilus
           ND03]
 gi|312277566|gb|ADQ62223.1| GTP pyrophosphokinase / Guanosine-3',5'-bis(Diphosphate)
           3'-pyrophosphohydrolase [Streptococcus thermophilus
           ND03]
          Length = 739

 Score =  329 bits (844), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 184/492 (37%), Positives = 292/492 (59%), Gaps = 49/492 (9%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           SY+S ++L+LV +A   A +AH  Q R+SGEP+IIHP++VA IL +L LD  ++A G LH
Sbjct: 18  SYMSADDLKLVEKAWHYATDAHSEQFRQSGEPYIIHPIQVAGILADLHLDAVTVACGFLH 77

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT   T + +E +FG  VR IV+G   V+KLGK++ K+    +    A++ R+M +
Sbjct: 78  DVVEDTEK-TLDDLEADFGTDVRNIVDG---VTKLGKVEYKSHEEQL----AENHRKMLM 129

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM++++RVI+VKLADRLHNMRTL H+   KQ  I+ ET++++APLA  LG+ +IK ELE+
Sbjct: 130 AMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELED 189

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
            +F Y N  ++ K+   + +  +E E  ++E    ++ KI+   +     +  ++    K
Sbjct: 190 TAFRYLNEVEFYKISHMMKEKRREREALVDE----IVDKIK--TYTAEQGLVGDVYGRPK 243

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSI++ +   +   +++  +  +R +++                 Y +LG +H +W P
Sbjct: 244 HIYSIFRKMRDKKKRFDQIYDLIAIRCVME------------THSDVYAMLGYIHELWRP 291

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PK NGYQS+HTT    +Y     +E+QIRT+EM  +AE G+AAH++ + 
Sbjct: 292 MPGRFKDYIANPKSNGYQSIHTT----VYGPKGPIEIQIRTKEMHQVAEYGVAAHWAYKK 347

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
            + G V                 ++   AL ++W+  + E Q+    N  ++ FVD++  
Sbjct: 348 GIKGKV-----------------DSKESALGMNWIKDLVELQD--ASNGDAKGFVDSVKE 388

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           D+   R++VFTP+G+++ LPK +  +D+AY IHT++G K   AKVNG +V  T  L   +
Sbjct: 389 DIFSERIYVFTPKGDVQELPKDSGPIDFAYAIHTQVGEKATGAKVNGRMVPLTAKLKTGD 448

Query: 619 VVEIITYNVSFS 630
           VVEIIT   SF 
Sbjct: 449 VVEIITNAHSFG 460


>gi|337288950|ref|YP_004628422.1| (p)ppGpp synthetase I SpoT/RelA [Thermodesulfobacterium sp. OPB45]
 gi|334902688|gb|AEH23494.1| (p)ppGpp synthetase I, SpoT/RelA [Thermodesulfobacterium geofontis
           OPF15]
          Length = 725

 Score =  329 bits (844), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 201/490 (41%), Positives = 289/490 (58%), Gaps = 55/490 (11%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           SYL      +V +A   A   H+GQ R+SGEP++ HP+EVA IL +++LD  +IAAGLLH
Sbjct: 13  SYLPGCNTRIVEKAYEWAARIHEGQMRKSGEPYLSHPMEVAYILAQMKLDLPTIAAGLLH 72

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV--KADDLRQM 256
           D VED+ V + E I++EFG  V  IV+G TK+        KN   SV  +  +A+ LR++
Sbjct: 73  DVVEDSQV-SIEDIKKEFGEEVAFIVDGVTKL--------KNLPSSVDKLTQQAESLRKI 123

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
             AM++++RVI+VKLADRLHNMRTL +   HK+  IA ETL+++APLA  LG+  +K EL
Sbjct: 124 IFAMSKDLRVILVKLADRLHNMRTLEYQAEHKRQRIAKETLEIYAPLAGRLGIDWVKCEL 183

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+L+F Y   ++Y ++K  V    KE ++ +E   KIL      ++ L+   +K ++   
Sbjct: 184 EDLAFKYLYPKEYERLKIEVEKRVKEAKEYVENVKKIL------EELLEKNNIKGKVLGR 237

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YS+YK + K   +I+E++QI  L          G   + +  + CY  LGLVH +W
Sbjct: 238 VKHLYSVYKKLQKYNLTIDELDQIYDL---------IGFRIIVNTVEECYKTLGLVHTLW 288

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAH--Y 494
           TPIP   KDYI+ PKPN YQSLHTT+   L  +  ++E+QIRTE MD +A  GIAAH  Y
Sbjct: 289 TPIPGRFKDYISLPKPNMYQSLHTTV---LGPNSKKIEIQIRTEYMDRVANEGIAAHFLY 345

Query: 495 SGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVD 554
              +F T   GH +                     + WL+ + E Q+E       REF++
Sbjct: 346 KEGIF-TSKHGHYK--------------------YLEWLSKLIELQKEL---KHPREFLE 381

Query: 555 TITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVL 614
           ++  DL    ++VFTP+G++  LP GAT +D+AY IHTEIGN+ V A VN  LV   + L
Sbjct: 382 SLKLDLFPDEIYVFTPKGDVIVLPVGATPLDFAYAIHTEIGNRCVRAFVNDKLVPLDYKL 441

Query: 615 ANAEVVEIIT 624
              ++V+I T
Sbjct: 442 NTGDIVKIET 451


>gi|418324872|ref|ZP_12936094.1| GTP diphosphokinase [Staphylococcus pettenkoferi VCU012]
 gi|365223674|gb|EHM64950.1| GTP diphosphokinase [Staphylococcus pettenkoferi VCU012]
          Length = 729

 Score =  329 bits (844), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 196/503 (38%), Positives = 292/503 (58%), Gaps = 49/503 (9%)

Query: 127 PERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELE 186
           P  + E L    SYLSP++ E V ++  +A+EAH+GQ R++G PFI+HP++VA IL E+ 
Sbjct: 6   PYSVDEVLSKAKSYLSPDDYEYVLKSYHIAYEAHEGQFRKNGLPFIMHPIQVAGILTEMR 65

Query: 187 LDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQ 246
           LD  +I AG LHD +EDT   TF+ ++  F   V  IVEG TK+ K+ K + K E     
Sbjct: 66  LDGPTIVAGFLHDVIEDTPY-TFDDVKNIFNEEVAVIVEGVTKLKKV-KYRSKEEQ---- 119

Query: 247 DVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKL 306
             +A++ R++F+A+ ++VRVI+VKLADRLHN+RTL  MP  KQ  I+ ETL+++APLA  
Sbjct: 120 --QAENHRKLFIALAKDVRVILVKLADRLHNVRTLKAMPRDKQVCISKETLEIYAPLAHR 177

Query: 307 LGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDL 366
           LG+  IK ELE+ +  Y ++  Y     R+ +L K+   E E   +  +  I  +  +  
Sbjct: 178 LGINTIKWELEDTALRYIDSVQYF----RIVNLMKKKRSEREAYIEHAIDHINSE--MQQ 231

Query: 367 MTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICY 426
           M ++ EI    K  YSIY+ ++K +   +++  +  +RII+            +    CY
Sbjct: 232 MNIQGEINGRPKHIYSIYRKMVKQKKQFDQIFDLLAIRIIV------------NSINDCY 279

Query: 427 HVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIA 486
            VLGLVH +W P+P   KDYIA PK N YQSLHTT++     +   LE+QIRT EM  IA
Sbjct: 280 AVLGLVHTLWKPMPGRFKDYIAMPKQNMYQSLHTTVVG---PNGDPLEIQIRTYEMHEIA 336

Query: 487 ERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGN 546
           E G+AAH+            A   G+    KT    N     +++WL   +E  E     
Sbjct: 337 EHGVAAHW------------AYKEGKKVNSKTQDFQN-----KLNWL---KELAETDKTT 376

Query: 547 MTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGN 606
             ++EF++++  DL   +V+ FTP+ ++  LP GA  +D+AY IH+E+GNKM+ AKVNG 
Sbjct: 377 SDAQEFMESLKFDLQSDKVYAFTPQSDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGK 436

Query: 607 LVSPTHVLANAEVVEIITYNVSF 629
           +    +VL   ++VEI T   S+
Sbjct: 437 IEPIDYVLQTGDIVEIRTSKHSY 459


>gi|253317214|ref|ZP_04840427.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus str.
           CF-Marseille]
          Length = 729

 Score =  329 bits (844), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 192/498 (38%), Positives = 291/498 (58%), Gaps = 49/498 (9%)

Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
           E L    SYLS +E E V ++  +A+EAH GQ  ++G P+I+HP++VA IL E+ LD  +
Sbjct: 11  EVLHKAKSYLSADEYEYVLKSYHIAYEAHKGQLPKNGLPYIMHPIQVAGILTEMRLDGPT 70

Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
           I AG LHD +EDT   TFE ++E F   V RIV+G TK+ K+ K + K E       +A+
Sbjct: 71  IVAGFLHDVIEDTPY-TFEDVKEMFNEEVARIVDGVTKLKKV-KYRSKEEQ------QAE 122

Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
           + R++F+A+ ++VRVI+VKLADRLHNMRTL  MP  KQ  I+ ETL+++APLA  LG+  
Sbjct: 123 NHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIYAPLAHRLGINT 182

Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
           IK ELE+ +  Y +   Y     R+ +L K+   E E   +  + +I  +  +D M ++ 
Sbjct: 183 IKWELEDTALRYIDNVQYF----RIVNLMKKKRSEREAYIETAIDRIRTE--MDRMNIEG 236

Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
           +I    K  YSIY+ ++K +   +++  +  +R+I+            +    CY +LGL
Sbjct: 237 DINGRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV------------NSINDCYAILGL 284

Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
           VH +W P+P   KDYIA PK N YQSLHTT++     +   LE+QIRT +M  IAE G+A
Sbjct: 285 VHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVVG---PNGDPLEIQIRTFDMHEIAEHGVA 341

Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
           AH++ +                  GK V   +     +++WL   +E  E    +  ++E
Sbjct: 342 AHWAYK-----------------EGKKVSEKDQTYQNKLNWL---KELAEADHTSSDAQE 381

Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
           F++T+  DL   +V+ FTP  ++  LP GA  +D+AY IH+E+GNKM+ AKVNG +V   
Sbjct: 382 FMETLKYDLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPID 441

Query: 612 HVLANAEVVEIITYNVSF 629
           ++L   ++VEI T   S+
Sbjct: 442 YILQTGDIVEIRTSKHSY 459


>gi|387908943|ref|YP_006339249.1| GTP pyrophosphokinase / Guanosine-3',5'-bis(Diphosphate)
           3'-pyrophosphohydrolase [Streptococcus thermophilus
           MN-ZLW-002]
 gi|387573878|gb|AFJ82584.1| GTP pyrophosphokinase / Guanosine-3',5'-bis(Diphosphate)
           3'-pyrophosphohydrolase [Streptococcus thermophilus
           MN-ZLW-002]
          Length = 739

 Score =  329 bits (844), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 184/492 (37%), Positives = 292/492 (59%), Gaps = 49/492 (9%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           SY+S ++L+LV +A   A +AH  Q R+SGEP+IIHP++VA IL +L LD  ++A G LH
Sbjct: 18  SYMSADDLKLVEKAWHYATDAHSEQFRQSGEPYIIHPIQVAGILADLHLDAVTVACGFLH 77

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT   T + +E +FG  VR IV+G   V+KLGK++ K+    +    A++ R+M +
Sbjct: 78  DVVEDTEK-TLDDLEADFGTDVRNIVDG---VTKLGKVEYKSHEEQL----AENHRKMLM 129

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM++++RVI+VKLADRLHNMRTL H+   KQ  I+ ET++++APLA  LG+ +IK ELE+
Sbjct: 130 AMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELED 189

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
            +F Y N  ++ K+   + +  +E E  ++E    ++ KI+   +     +  ++    K
Sbjct: 190 TAFRYLNEVEFYKISHMMKEKRREREALVDE----IVDKIK--TYTAEQGLVGDVYGRPK 243

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSI++ +   +   +++  +  +R +++                 Y +LG +H +W P
Sbjct: 244 HIYSIFRKMRDKKKRFDQIYDLIAIRCVME------------THSDVYAMLGYIHELWRP 291

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PK NGYQS+HTT    +Y     +E+QIRT+EM  +AE G+AAH++ + 
Sbjct: 292 MPGRFKDYIANPKSNGYQSIHTT----VYGPKGPIEIQIRTKEMHQVAEYGVAAHWAYKK 347

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
            + G V                 ++   AL ++W+  + E Q+    N  ++ FVD++  
Sbjct: 348 GIKGKV-----------------DSKESALGMNWIKDLVELQD--ASNGDAKGFVDSVKE 388

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           D+   R++VFTP+G+++ LPK +  +D+AY IHT++G K   AKVNG +V  T  L   +
Sbjct: 389 DIFSERIYVFTPKGDVQELPKDSGPIDFAYAIHTQVGEKATGAKVNGRMVPLTAKLKTGD 448

Query: 619 VVEIITYNVSFS 630
           VVEIIT   SF 
Sbjct: 449 VVEIITNAHSFG 460


>gi|170079402|ref|YP_001736040.1| GTP pyrophosphokinase [Synechococcus sp. PCC 7002]
 gi|169887071|gb|ACB00785.1| GTP pyrophosphokinase/ RelA/SpoT family protein [Synechococcus sp.
           PCC 7002]
          Length = 755

 Score =  329 bits (844), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 198/484 (40%), Positives = 275/484 (56%), Gaps = 48/484 (9%)

Query: 141 LSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDT 200
           +S  + +L+  A   A   H+GQ R+SGEP+I HP+ VA +L +L  +   IAAG LHD 
Sbjct: 38  VSEGDRQLIGEAFRFAHALHEGQTRKSGEPYIAHPIAVAGLLLDLGGNGAMIAAGFLHDV 97

Query: 201 VEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAM 260
           VEDT V + E IEE FGA  R++VEG TK++K      K E       +A++ R+MFL+M
Sbjct: 98  VEDTEV-SPEEIEERFGAETRKLVEGVTKLTKF-TFSSKTER------QAENFRRMFLSM 149

Query: 261 TEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLS 320
            E++RVI+VKLADRLHNMRTL H+ P KQ  IA ET ++FAPLA  LG+++ K ELE+L 
Sbjct: 150 AEDIRVIVVKLADRLHNMRTLEHLRPDKQERIALETREIFAPLANRLGIWRFKWELEDLC 209

Query: 321 FMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEP 380
           F Y   E Y  +++ +++   E E +LEEA +I+      D+   L     EI+   K  
Sbjct: 210 FKYLEREAYRSMQKHISEKRTEREAKLEEAIEIIR-----DRLRHLGLHVWEIKGRPKHL 264

Query: 381 YSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIP 440
           YSIY  + +     +E+  IA +RII++                CY  L ++H  + PIP
Sbjct: 265 YSIYHKMQRQHKEFDEIFDIAGIRIIVE------------TNDECYRALAVIHDAFKPIP 312

Query: 441 RAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFV 500
              KDYI  PKPN YQSLHTT++     +   LEVQIRT EM  IAE GIAAH+  +   
Sbjct: 313 GRFKDYIGLPKPNRYQSLHTTVVGL---NGRPLEVQIRTMEMHHIAEYGIAAHWKYKE-- 367

Query: 501 TGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDL 560
               GH+  +  S   K             +WL  + EWQ +      + E++D +  +L
Sbjct: 368 ---AGHSAASFTSEDEK------------FTWLRQLIEWQSDL---KDAEEYIDNLKDNL 409

Query: 561 LGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVV 620
               V+VFTP G++  L KGAT +D+AY IHTE+GN M  A++NG        L N ++V
Sbjct: 410 FEDDVYVFTPNGDVVALAKGATSIDFAYRIHTEVGNHMKGARINGRWSVLEKKLRNGDIV 469

Query: 621 EIIT 624
           EIIT
Sbjct: 470 EIIT 473


>gi|334136491|ref|ZP_08509954.1| GTP diphosphokinase [Paenibacillus sp. HGF7]
 gi|333605960|gb|EGL17311.1| GTP diphosphokinase [Paenibacillus sp. HGF7]
          Length = 728

 Score =  329 bits (844), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 192/497 (38%), Positives = 283/497 (56%), Gaps = 51/497 (10%)

Query: 134 LRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIA 193
           L     Y    EL  ++ A   A +AH GQ R+SGEP+I+HP+ VA IL ++++D  SI 
Sbjct: 7   LEKAAQYFKETELNRIKEAYEFAEQAHHGQVRKSGEPYILHPLAVADILVDMQMDVTSII 66

Query: 194 AGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDL 253
           A LLHD VEDT  V+ E ++++FG T   +V+G TK+ ++ K K K E  +      ++ 
Sbjct: 67  AALLHDVVEDT-TVSLEAVQDKFGRTCAMLVDGLTKLERI-KFKTKEEQQN------ENY 118

Query: 254 RQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIK 313
           R+MF+AM +++RVI++KLADRLHNMRTL +     Q  IA ETL++F P+A  LG+  IK
Sbjct: 119 RKMFVAMAQDIRVILIKLADRLHNMRTLKYQSEESQRRIADETLEIFCPIAHRLGISAIK 178

Query: 314 SELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEI 373
            E+E+++  Y N + Y     R+ +L ++   E E+  + +++ I+D   L  M ++ +I
Sbjct: 179 WEMEDIALRYLNPQQYY----RIVNLMQKKRTEREKYIEDVIRNIQDK--LREMGIEGDI 232

Query: 374 RSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVH 433
               K  YSI+K +       NE+  +  LR+I+               + CY  LG++H
Sbjct: 233 SGRPKHIYSIHKKMSSRNKQFNEIYDLMALRVIV------------DNIKDCYAALGIIH 280

Query: 434 GIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAH 493
            +W P+P   KDYIA PKPN YQSLHTT+I    E    LEVQIRT EM   AE GIAAH
Sbjct: 281 TLWKPMPGRFKDYIAMPKPNMYQSLHTTVIGPKGEP---LEVQIRTWEMHKTAEYGIAAH 337

Query: 494 YSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFV 553
           ++          +   NG SP G          + ++ W   I E Q+E      + EF+
Sbjct: 338 WA----------YKEGNG-SPEG--------TFSDKMQWFREILELQKE---TDNASEFM 375

Query: 554 DTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHV 613
           +++  D     VFVFTP+GE+  LP GA  +D+AY IHTE+GN+ + AK+NG +V   H 
Sbjct: 376 ESMKMDFFTDLVFVFTPKGEVIELPAGAVPLDFAYRIHTEVGNRTIGAKINGRIVPLDHK 435

Query: 614 LANAEVVEIITYNVSFS 630
           L   ++VEI+T   S+ 
Sbjct: 436 LKTGDIVEILTSKHSYG 452


>gi|322517601|ref|ZP_08070469.1| GTP diphosphokinase [Streptococcus vestibularis ATCC 49124]
 gi|322123766|gb|EFX95344.1| GTP diphosphokinase [Streptococcus vestibularis ATCC 49124]
          Length = 739

 Score =  329 bits (844), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 183/492 (37%), Positives = 291/492 (59%), Gaps = 49/492 (9%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           +Y+S ++L+LV  A   A +AH GQ R+SGEP+IIHP++VA IL +L LD  ++A G LH
Sbjct: 18  AYMSADDLKLVEEAWHYATDAHSGQFRQSGEPYIIHPIQVAGILADLHLDAVTVACGFLH 77

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT   T + +E +FG  VR IV+G   V+KLGK++ K+    +    A++ R+M +
Sbjct: 78  DVVEDTEK-TLDDLEADFGTDVRNIVDG---VTKLGKVEYKSHEEQL----AENHRKMLM 129

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM++++RVI+VKLADRLHNMRTL H+   KQ  I+ ET++++APLA  LG+ +IK ELE+
Sbjct: 130 AMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELED 189

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
           +SF Y N  ++ K+   + +  +E E  ++E    ++ KI+   +     +  ++    K
Sbjct: 190 MSFRYLNEVEFYKISHMMKEKRREREALVDE----IVDKIK--TYTAEQGLVGDVYGRPK 243

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSI++ +   +   +++  +  +R +++                 Y +LG +H +W P
Sbjct: 244 HIYSIFRKMRDKKKRFDQIYDLIAIRCVME------------THSDVYAMLGYIHELWRP 291

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PK NGYQS+HTT    +Y     +E+QIRT+EM  +AE G+AAH++ + 
Sbjct: 292 MPGRFKDYIANPKSNGYQSIHTT----VYGPKGPIEIQIRTKEMHQVAEYGVAAHWAYK- 346

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                           +G    +++   AL ++W+  + E Q+    N  ++ FVD++  
Sbjct: 347 ----------------KGIKSKVDSKESALGMNWIKDLVELQD--ASNGDAKGFVDSVKE 388

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           D+   R++VFTP G ++ LPK +  +D+AY IHT++G K   AKVNG +V  T  L   +
Sbjct: 389 DIFSERIYVFTPNGAVQELPKDSGPIDFAYAIHTQVGEKATGAKVNGRMVPLTAKLKTGD 448

Query: 619 VVEIITYNVSFS 630
           VVEI+T   SF 
Sbjct: 449 VVEIVTNANSFG 460


>gi|218782928|ref|YP_002434246.1| (p)ppGpp synthetase I SpoT/RelA [Desulfatibacillum alkenivorans
           AK-01]
 gi|218764312|gb|ACL06778.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfatibacillum alkenivorans
           AK-01]
          Length = 713

 Score =  329 bits (844), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 198/501 (39%), Positives = 279/501 (55%), Gaps = 59/501 (11%)

Query: 124 EDSPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILG 183
           +D  +++W+       Y    + +L+ RA + +   HDGQ R SGEP++ HP+EVA IL 
Sbjct: 5   QDIIDKVWD-------YNPDADFDLIERAYIFSARVHDGQVRLSGEPYLSHPLEVAGILA 57

Query: 184 ELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENH 243
           ++ LD  SI AGLLHD VEDT+  T E+I+  FGA +  IV+G TK+SKL          
Sbjct: 58  DMHLDVTSIGAGLLHDVVEDTHA-TPEQIDSMFGADMAHIVKGVTKLSKLS-------FR 109

Query: 244 SVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPL 303
           S Q+ +A+ +R+M LAM +++RV+++KLADR+HNMRTL     +KQ  IA ETL ++AP+
Sbjct: 110 SSQERQAESIRKMILAMADDIRVVLIKLADRVHNMRTLQFQKENKQVRIAQETLDIYAPI 169

Query: 304 AKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQF 363
           A  LG+Y IK ELE+ S MY   E Y +++        E +  +E+   IL  K+ +   
Sbjct: 170 AGRLGIYWIKQELEDRSSMYLYPEQYREIENLQNQKKHERDAYVEKVKGILHDKLGE--- 226

Query: 364 LDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQ 423
                +K +I    K  YSIY  +L+      EV  I   R+I+   P            
Sbjct: 227 ---AGLKGQILGRYKSFYSIYNKMLQQNLEFEEVYDIIAFRVILDTIPQ----------- 272

Query: 424 ICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMD 483
            CY  LGLVH IW PI +  KDYI  PKPN YQSLHTT+I    E   R+E+QIRT+EMD
Sbjct: 273 -CYEALGLVHNIWKPIAKKFKDYIGNPKPNMYQSLHTTVIGPFGE---RMEIQIRTQEMD 328

Query: 484 LIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEF 543
            +A+ GIAAH+S +             G+    KT            +W+  I E Q+  
Sbjct: 329 AVAKSGIAAHWSYK------------EGKQADEKT--------RQAFAWIQDIVEHQKNV 368

Query: 544 VGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKV 603
                 +EF++ +  +L    V+VFTP G++K LP+GAT +D+AY IH+E+GN    AKV
Sbjct: 369 ---KDPQEFLENVRIELFPDEVYVFTPAGDVKALPRGATPLDFAYAIHSEVGNHCTGAKV 425

Query: 604 NGNLVSPTHVLANAEVVEIIT 624
           NG +V     L   + VEI T
Sbjct: 426 NGRMVPLRTELKTGDSVEIRT 446


>gi|407477775|ref|YP_006791652.1| GTP pyrophosphokinase [Exiguobacterium antarcticum B7]
 gi|407061854|gb|AFS71044.1| GTP pyrophosphokinase [Exiguobacterium antarcticum B7]
          Length = 732

 Score =  329 bits (843), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 196/493 (39%), Positives = 287/493 (58%), Gaps = 54/493 (10%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++  E++ + RA   A + H+GQ RRSGEP+IIHPV+VA IL ++ LD  +I A LLHD
Sbjct: 19  YMTEAEVKDIERAYQFAKDEHEGQFRRSGEPYIIHPVQVAGILVDIGLDATTIVAALLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            VEDT++ T E + E FGA V  +V+G   V+KLGK+K K++   +    A++ R+MF+A
Sbjct: 79  VVEDTDI-TLEELTERFGADVTMLVDG---VTKLGKIKYKSKREEL----AENHRKMFIA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M E++RVI++KLADRLHNMRTL HM   KQ   A ETL++FAPLA  LG+  IK ELE++
Sbjct: 131 MAEDIRVILIKLADRLHNMRTLQHMVKEKQVQKAEETLEIFAPLAHRLGISTIKWELEDI 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIED--DQFLDLMTVKTEIRSVC 377
           S  Y N + Y     R+  + K+   E E     L+  + D  ++ L+ + +  ++    
Sbjct: 191 SLRYINPQQYY----RIVSMMKQKRTERE----ALVTSVIDEVNEVLEEVEIAADVDGRP 242

Query: 378 KEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWT 437
           K  YSIY  +  S+   +E+  +  +RII+               + CY VLG++H  + 
Sbjct: 243 KHIYSIYNKMQNSKKEFSEIYDLMAVRIIV------------DSIKDCYAVLGIIHTQYK 290

Query: 438 PIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGR 497
           P+P   KDYIA PKPN YQSLHTT+I    E    LEVQIRT +M  IAE GIAAH+   
Sbjct: 291 PMPGRFKDYIAMPKPNMYQSLHTTVIGPKGEP---LEVQIRTRDMHFIAEYGIAAHW--- 344

Query: 498 VFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTIT 557
                    A   G+    K+          +I+    I E Q++      + EF++++ 
Sbjct: 345 ---------AYKEGKEQEAKS------GFEDKIAHFREILELQKD---TADAEEFMESVK 386

Query: 558 RDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANA 617
            D     ++VFTP+G++  LPKG+  +DYAY IHTEIG++ + AKVNG +V   + L   
Sbjct: 387 VDFFSDMLYVFTPKGDVIELPKGSVPIDYAYRIHTEIGHRTIGAKVNGRMVPIDYKLKTG 446

Query: 618 EVVEIITYNVSFS 630
           +++EI+T   S+ 
Sbjct: 447 DIIEIVTSKHSYG 459


>gi|354558097|ref|ZP_08977353.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfitobacterium
           metallireducens DSM 15288]
 gi|353548822|gb|EHC18266.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfitobacterium
           metallireducens DSM 15288]
          Length = 726

 Score =  329 bits (843), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 188/487 (38%), Positives = 282/487 (57%), Gaps = 51/487 (10%)

Query: 138 ISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLL 197
           + ++ P E  L  +A   A +AH GQ R SGE +I HP+EVA+IL ELE+D  +IAA LL
Sbjct: 10  LKHVFPQESGLAEKAYYFAEKAHRGQLRNSGEDYIQHPLEVAKILLELEMDEATIAAALL 69

Query: 198 HDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMF 257
           HD VEDT   T E IE+EFG  V  +V+G   V+KLG++  K +       + ++LR+MF
Sbjct: 70  HDVVEDTPY-TIEDIEKEFGPQVALMVDG---VTKLGRIPYKTKVEQ----QVENLRKMF 121

Query: 258 LAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELE 317
           LAM +++RVI++KLADRLHNMRTL +    KQ  IA ET+++FAPLA  LG+++IK ELE
Sbjct: 122 LAMAKDIRVILIKLADRLHNMRTLKYHSHEKQKEIAQETIEIFAPLANRLGIFRIKWELE 181

Query: 318 NLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVC 377
           +LSF Y   ++Y  +   +A   +E E ++ E  + L  ++ +      + +  EI    
Sbjct: 182 DLSFRYLKPQEYYDLSEGIAFKRREREDQINEVIEQLRHRLGE------VGIHAEIAGRP 235

Query: 378 KEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWT 437
           K  YSIY+ ++     ++E+  +  +R+I+                 CY  LG++H +W 
Sbjct: 236 KHFYSIYRKMVTQNKELSEIYDLTAVRVIV------------DSVNDCYGALGIIHTMWK 283

Query: 438 PIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGR 497
           P+P   KDYIA PKPN YQSLHTTL+    E     E+QIRT EM   AE GIAAH+  +
Sbjct: 284 PLPGRFKDYIAMPKPNMYQSLHTTLVGAHGEP---FEIQIRTWEMHRTAEYGIAAHWKYK 340

Query: 498 VFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTIT 557
                + G                   +   ++SW+  + EWQ +   +  + EF++++ 
Sbjct: 341 EGSKSISG-------------------SFDQKLSWIRQLLEWQHD---SKDAGEFMESLK 378

Query: 558 RDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANA 617
            DL    VFVFTP+G++  LP G+  +D+AY +HT++G++ V AK+N  +V     L N 
Sbjct: 379 IDLFSDTVFVFTPKGDVVELPAGSCPIDFAYRVHTDVGHRCVGAKINSRIVPLDSKLVNG 438

Query: 618 EVVEIIT 624
           ++VEI+T
Sbjct: 439 DIVEILT 445


>gi|376001755|ref|ZP_09779611.1| bifunctional (p)ppGpp synthetase II and guanosine-3',5'-bis
           pyrophosphate 3'-pyrophosphohydrolase [Arthrospira sp.
           PCC 8005]
 gi|375329867|emb|CCE15364.1| bifunctional (p)ppGpp synthetase II and guanosine-3',5'-bis
           pyrophosphate 3'-pyrophosphohydrolase [Arthrospira sp.
           PCC 8005]
          Length = 764

 Score =  329 bits (843), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 197/484 (40%), Positives = 274/484 (56%), Gaps = 48/484 (9%)

Query: 141 LSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDT 200
            SP+  +L+ RA + A++ H GQ R+SGEP+I HP+ VA IL  L  D   +AAG LHD 
Sbjct: 38  FSPDN-DLISRAFLFAYQLHKGQYRKSGEPYINHPIAVAGILRFLGSDTAMVAAGFLHDI 96

Query: 201 VEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAM 260
           +EDT+V T E +E  FG  VR +VEG TK+SK           +  + +A++ R+MFLAM
Sbjct: 97  IEDTDV-TPEELESHFGPEVRHLVEGVTKLSKFNF-------SNTTERQAENFRRMFLAM 148

Query: 261 TEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLS 320
            +++RVI+VKLADRLHNMRTL  M   KQ SIA ET ++FAPLA  LG+ ++K ELE+L+
Sbjct: 149 AQDIRVIVVKLADRLHNMRTLEFMSESKQRSIALETREIFAPLANRLGIGRLKWELEDLA 208

Query: 321 FMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEP 380
           F Y   E Y +++ RVAD     E++L     IL  ++E            E+    K  
Sbjct: 209 FKYIEPEAYREIQIRVADRRATREEKLAALADILRDRMEKSGIRCY-----EVTGRPKHL 263

Query: 381 YSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIP 440
           Y IYK + +     +E+  IA LR+I++              + CY  L +VH  + PIP
Sbjct: 264 YGIYKKMQERHKQFHEIYDIAALRLIVE------------TNEECYRALAIVHDSYRPIP 311

Query: 441 RAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFV 500
              KDYI  PKPN YQSLHT +I     +   +EVQIRT EM  IAE GIAAH+      
Sbjct: 312 GRFKDYIGLPKPNRYQSLHTGVIG---NTGRPVEVQIRTVEMHHIAEYGIAAHWK----- 363

Query: 501 TGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDL 560
                  +  G S  GK    +      + +WL  + EWQ +      ++E++DT+  +L
Sbjct: 364 ------YKETGGSEFGKLTETDE-----KFTWLRQLLEWQSDL---KDAQEYLDTVKNNL 409

Query: 561 LGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVV 620
               V+VFTP G++  L  GAT VD+AY +H+E+GN    AKVN  +V    VL N ++V
Sbjct: 410 FDEDVYVFTPDGDVMALSNGATTVDFAYRVHSEVGNHCKGAKVNERMVPLDTVLKNGDIV 469

Query: 621 EIIT 624
           EI+T
Sbjct: 470 EILT 473


>gi|323490008|ref|ZP_08095229.1| GTP pyrophosphokinase [Planococcus donghaensis MPA1U2]
 gi|323396304|gb|EGA89129.1| GTP pyrophosphokinase [Planococcus donghaensis MPA1U2]
          Length = 476

 Score =  329 bits (843), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 185/491 (37%), Positives = 290/491 (59%), Gaps = 49/491 (9%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           SY++ + ++ +++A  +A++AH GQ R+SGEP+I+HPV+VA IL +L++D  ++AAG LH
Sbjct: 18  SYMNADHVQTIKKAYQVAYDAHMGQFRKSGEPYIVHPVQVAGILADLQMDPATVAAGFLH 77

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT V + E I  +F   V  +V+G TK+SK+  L       S ++ +A++ R+MF+
Sbjct: 78  DVVEDTEV-SREDIVHDFDEEVAMLVDGVTKLSKIKYL-------SKEEQQAENHRKMFV 129

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM +++RVI++KLADRLHN+RTL +    KQ   A ETL++FAP+A  LG+  IK ELE+
Sbjct: 130 AMAQDIRVILIKLADRLHNLRTLKYQTVEKQRIKANETLEIFAPIAHRLGINTIKWELED 189

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
            +  Y N + Y     R+ +L K+   E E+    +M ++     LD + +K ++    K
Sbjct: 190 TALRYLNPQQYY----RIVNLMKKKRTEREDYLNKVMDEVRVQ--LDEVEIKADLFGRPK 243

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIY+ +       NE+  +  +RI ++              + CY VLG++H  W P
Sbjct: 244 HIYSIYRKMAIQNKQFNEIYDLLAVRITVESI------------KDCYAVLGIIHSTWKP 291

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PK N YQSLHTT+I    +    LEVQIRTEEM  IAE G+AAH++ + 
Sbjct: 292 MPGRFKDYIAMPKQNLYQSLHTTVIGPQGDP---LEVQIRTEEMHRIAEYGVAAHWAYK- 347

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                            GK +    +++  R+SW   I ++Q E   +  + EF++++  
Sbjct: 348 ----------------EGKIIDKPKSSVDSRLSWFREILDFQNE---SDNAEEFMESLKY 388

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           DL    V+VF+P+G++  +P G+  +D+AY +H+EIGNK + AK+NG +      L   +
Sbjct: 389 DLFSDMVYVFSPKGDVIEMPAGSCSIDFAYRVHSEIGNKTIGAKINGKMAPLDTELHTGD 448

Query: 619 VVEIITYNVSF 629
           +VEI+T   SF
Sbjct: 449 IVEILTSKQSF 459


>gi|209522975|ref|ZP_03271532.1| (p)ppGpp synthetase I, SpoT/RelA [Arthrospira maxima CS-328]
 gi|209496562|gb|EDZ96860.1| (p)ppGpp synthetase I, SpoT/RelA [Arthrospira maxima CS-328]
          Length = 764

 Score =  329 bits (843), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 197/484 (40%), Positives = 274/484 (56%), Gaps = 48/484 (9%)

Query: 141 LSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDT 200
            SP+  +L+ RA + A++ H GQ R+SGEP+I HP+ VA IL  L  D   +AAG LHD 
Sbjct: 38  FSPDN-DLISRAFLFAYQLHKGQYRKSGEPYINHPIAVAGILRFLGSDTAMVAAGFLHDI 96

Query: 201 VEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAM 260
           +EDT+V T E +E  FG  VR +VEG TK+SK           +  + +A++ R+MFLAM
Sbjct: 97  IEDTDV-TPEELESHFGPEVRHLVEGVTKLSKFNF-------SNTTERQAENFRRMFLAM 148

Query: 261 TEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLS 320
            +++RVI+VKLADRLHNMRTL  M   KQ SIA ET ++FAPLA  LG+ ++K ELE+L+
Sbjct: 149 AQDIRVIVVKLADRLHNMRTLEFMSESKQRSIALETREIFAPLANRLGIGRLKWELEDLA 208

Query: 321 FMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEP 380
           F Y   E Y +++ RVAD     E++L     IL  ++E            E+    K  
Sbjct: 209 FKYIEPEAYREIQIRVADRRATREEKLAALADILRDRMEKSGIRCY-----EVTGRPKHL 263

Query: 381 YSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIP 440
           Y IYK + +     +E+  IA LR+I++              + CY  L +VH  + PIP
Sbjct: 264 YGIYKKMQERHKQFHEIYDIAALRLIVE------------TNEECYRALAIVHDSYRPIP 311

Query: 441 RAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFV 500
              KDYI  PKPN YQSLHT +I     +   +EVQIRT EM  IAE GIAAH+      
Sbjct: 312 GRFKDYIGLPKPNRYQSLHTGVIG---NTGRPVEVQIRTVEMHHIAEYGIAAHWK----- 363

Query: 501 TGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDL 560
                  +  G S  GK    +      + +WL  + EWQ +      ++E++DT+  +L
Sbjct: 364 ------YKETGGSEFGKLTETDE-----KFTWLRQLLEWQSDL---KDAQEYLDTVKNNL 409

Query: 561 LGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVV 620
               V+VFTP G++  L  GAT VD+AY +H+E+GN    AKVN  +V    VL N ++V
Sbjct: 410 FDEDVYVFTPDGDVMALSNGATTVDFAYRVHSEVGNHCKGAKVNERMVPLDTVLKNGDIV 469

Query: 621 EIIT 624
           EI+T
Sbjct: 470 EILT 473


>gi|169832945|ref|YP_001695030.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
           [Streptococcus pneumoniae Hungary19A-6]
 gi|168995447|gb|ACA36059.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
           [Streptococcus pneumoniae Hungary19A-6]
          Length = 740

 Score =  329 bits (843), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 189/494 (38%), Positives = 289/494 (58%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YL+  ++  V +AL+   E H GQ R+SGEP+IIHP++VA IL +L+LD  ++A G 
Sbjct: 16  TKEYLTEEDVHFVHKALVYVVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT+  T + +E EFG  VR IV+G   V+KLGK++ K    S+++  A++ R+M
Sbjct: 76  LHDVVEDTDA-TLDDLEREFGPDVRVIVDG---VTKLGKVEYK----SIEEQLAENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM+E++RVI+VKL+DRLHNMRTL H+   KQ  I+ ET++++APLA  LG+  +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISKETMEIYAPLAHRLGISSVKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y N  ++ K+   + +  +E E  ++E    ++ K+E  ++     +K +I   
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLE--EYTTERHLKGKIYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSI++ +   R    E+  +  +R I+              Q   Y +LG VH  W
Sbjct: 242 PKHIYSIFRKMQDKRKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHEFW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA  K NGYQS+HTT    +Y     +E QIRT+EM  +AE G+AAH++ 
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  + G V                 N+   A+ ++W+  + E Q++      ++EFVD++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDSV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             + L   ++VFTP G +++LPK +  +D+AY IHT++G K   AKVNG +V  T  L  
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445

Query: 617 AEVVEIITYNVSFS 630
            + VEII    SF 
Sbjct: 446 GDQVEIIANPNSFG 459


>gi|312864064|ref|ZP_07724300.1| GTP diphosphokinase [Streptococcus vestibularis F0396]
 gi|311100477|gb|EFQ58684.1| GTP diphosphokinase [Streptococcus vestibularis F0396]
          Length = 739

 Score =  329 bits (843), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 183/492 (37%), Positives = 291/492 (59%), Gaps = 49/492 (9%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           +Y+S ++L+LV  A   A +AH GQ R+SGEP+IIHP++VA IL +L LD  ++A G LH
Sbjct: 18  AYMSADDLKLVEEAWHYATDAHSGQFRQSGEPYIIHPIQVAGILADLHLDAVTVACGFLH 77

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT   T + +E +FG  VR IV+G   V+KLGK++ K+    +    A++ R+M +
Sbjct: 78  DVVEDTEK-TLDDLEADFGTDVRNIVDG---VTKLGKVEYKSHEEQL----AENHRKMLM 129

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM++++RVI+VKLADRLHNMRTL H+   KQ  I+ ET++++APLA  LG+ +IK ELE+
Sbjct: 130 AMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELED 189

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
           +SF Y N  ++ K+   + +  +E E  ++E    ++ KI+   +     +  ++    K
Sbjct: 190 MSFRYLNEVEFYKISHMMKEKRREREALVDE----IVDKIK--TYTAEQGLVGDVYGRPK 243

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSI++ +   +   +++  +  +R +++                 Y +LG +H +W P
Sbjct: 244 HIYSIFRKMRDKKKRFDQIYDLIAIRCVME------------THSDVYAMLGYIHELWRP 291

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PK NGYQS+HTT    +Y     +E+QIRT+EM  +AE G+AAH++ + 
Sbjct: 292 MPGRFKDYIANPKSNGYQSIHTT----VYGPKGPIEIQIRTKEMHQVAEYGVAAHWAYK- 346

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                           +G    +++   AL ++W+  + E Q+    N  ++ FVD++  
Sbjct: 347 ----------------KGIKSKVDSKESALGMNWIKDLVELQD--ASNGDAKGFVDSVKE 388

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           D+   R++VFTP G ++ LPK +  +D+AY IHT++G K   AKVNG +V  T  L   +
Sbjct: 389 DIFSERIYVFTPNGAVQELPKDSGPIDFAYAIHTQVGEKATGAKVNGRMVPLTAKLKTGD 448

Query: 619 VVEIITYNVSFS 630
           VVEI+T   SF 
Sbjct: 449 VVEIVTNANSFG 460


>gi|418972852|ref|ZP_13520907.1| RelA/SpoT family protein [Streptococcus pseudopneumoniae ATCC
           BAA-960]
 gi|383350928|gb|EID28766.1| RelA/SpoT family protein [Streptococcus pseudopneumoniae ATCC
           BAA-960]
          Length = 740

 Score =  329 bits (843), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 191/497 (38%), Positives = 292/497 (58%), Gaps = 56/497 (11%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YL+  ++  V +AL+ A + H GQ R+SGEP+IIHP++VA IL +L+LD  ++A G 
Sbjct: 16  TKEYLTEEDVHFVHKALVYAVDCHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT+  T + +E EFG  VR IV+G   V+KLGK++ K    S+++  A++ R+M
Sbjct: 76  LHDVVEDTDA-TLDDLEREFGPDVRVIVDG---VTKLGKVEYK----SIEEQLAENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM+E++RVI+VKL+DRLHNMRTL H+   KQ  I+ ET++++APLA  LG+  +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISKETMEIYAPLAHRLGISSVKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIED---DQFLDLMTVKTEI 373
           E+LSF Y N  ++ K+   + +  +E E  ++E    ++ K+E+   D+ L     K +I
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLEEYTIDRHL-----KGKI 238

Query: 374 RSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVH 433
               K  YSI++ +   R    E+  +  +R I+              Q   Y +LG VH
Sbjct: 239 YGRPKHIYSIFRKMQDKRKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVH 286

Query: 434 GIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAH 493
            +W P+P   KDYIA  K NGYQS+HTT    +Y     +E QIRT+ M  +AE G+AAH
Sbjct: 287 ELWKPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKAMHEVAEYGVAAH 342

Query: 494 YSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFV 553
           ++ +  V G V                 N+   A+ ++W+  + E Q++      ++EFV
Sbjct: 343 WAYKKGVKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFV 382

Query: 554 DTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHV 613
           D++  + L   ++VFTP G +++LPK +  +D+AY IHT++G K   AKVNG +V  T  
Sbjct: 383 DSVKENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTK 442

Query: 614 LANAEVVEIITYNVSFS 630
           L   + VEI+T   SF 
Sbjct: 443 LKTGDQVEIVTNPNSFG 459


>gi|301064997|ref|ZP_07205342.1| GTP diphosphokinase [delta proteobacterium NaphS2]
 gi|300440846|gb|EFK05266.1| GTP diphosphokinase [delta proteobacterium NaphS2]
          Length = 716

 Score =  329 bits (843), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 196/499 (39%), Positives = 282/499 (56%), Gaps = 58/499 (11%)

Query: 129 RLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
           RL +     +SY    ++EL+ +A + + + H GQ R SGEP++ HP+E A IL +L++D
Sbjct: 3   RLNDITSQVLSYHPKADIELIEKAYVYSAKVHQGQIRLSGEPYLSHPLEAAYILTQLKMD 62

Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
              IAAGLLHD VEDT+  + E I   FG     IV+G TK+SK+     K         
Sbjct: 63  VVCIAAGLLHDVVEDTHA-SLEEISGLFGEETANIVDGVTKISKIHFKSSKQR------- 114

Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
           +A+++R+M LAM+ ++RVI+VKLADRLHNMRTL   P  KQ SIATETL ++APLA  +G
Sbjct: 115 QAENVRKMILAMSTDIRVILVKLADRLHNMRTLGFQPEKKQRSIATETLDIYAPLAGRMG 174

Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIED---DQFLD 365
           ++ IKS LE+L   Y   + YA +K     L    + E+ +     MK+++D   D+ L 
Sbjct: 175 IHWIKSNLEDLCLFYLEPKIYASIK----SLTARRQSEMGD----FMKRVQDILTDE-LG 225

Query: 366 LMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQIC 425
            + +   I+   K  YSIYK ++     + +V  I   R+I+            S  + C
Sbjct: 226 KVNIAATIKGRQKHFYSIYKKMIAQDLEVGQVFDILAFRVIV------------SSIKEC 273

Query: 426 YHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLI 485
           Y  LG +H IW P+ +  KDYI+ PK N YQSLHTT+   + E   R+EVQIRT EM  +
Sbjct: 274 YEALGHIHSIWKPVSKRFKDYISVPKANMYQSLHTTVFGPMKE---RMEVQIRTWEMHHV 330

Query: 486 AERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVG 545
           AE GIAAH+                 +   G+ V   +     R +WL  + +WQ+    
Sbjct: 331 AESGIAAHW-----------------KYKEGRAVQKADEK---RFAWLKELLDWQKNL-- 368

Query: 546 NMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNG 605
               +EF++T+  DL    V+VFTP GE+K+ PKGAT++D+AY IH+E+G K   AKV+G
Sbjct: 369 -DDPQEFLETVKMDLFPDEVYVFTPTGEVKSFPKGATMIDFAYSIHSEVGEKCSGAKVDG 427

Query: 606 NLVSPTHVLANAEVVEIIT 624
            +V     L N  +VE+IT
Sbjct: 428 RMVPLRAELKNGNIVEVIT 446


>gi|282899912|ref|ZP_06307873.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA
           [Cylindrospermopsis raciborskii CS-505]
 gi|281195182|gb|EFA70118.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA
           [Cylindrospermopsis raciborskii CS-505]
          Length = 756

 Score =  329 bits (843), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 200/525 (38%), Positives = 294/525 (56%), Gaps = 63/525 (12%)

Query: 101 LLHVACKRW-RLCLSPSVSSDAFKEDSPERLWEDLRPTISYLSPNELELVRRALMLAFEA 159
           L  +   +W + CL  + S+    ED   R              N+  L+  AL  A+E 
Sbjct: 8   LTKINLPQWLKRCLQENTSNSGSGEDDRRR--------------NDNNLICSALKFAYEL 53

Query: 160 HDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGAT 219
           H+GQ R+SGEP+I HP+ VA +L +L      IAAG LHD VEDT V T E IE++FG  
Sbjct: 54  HEGQYRKSGEPYIAHPIAVADLLRDLGCSATMIAAGFLHDVVEDTEV-TIEDIEQKFGHE 112

Query: 220 VRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMR 279
           VR++VEG TK+SK+     K E+      +A++ R+MFL+M +++RVI+VKLADRLHNMR
Sbjct: 113 VRQLVEGVTKLSKIN-FTSKTES------QAENFRRMFLSMAQDIRVIVVKLADRLHNMR 165

Query: 280 TLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADL 339
           TL +M    +   A ET  +FAPLA  LG++ IK ELE+L+F Y   + Y +++  VA+ 
Sbjct: 166 TLQYMSETSRRRSAQETRDIFAPLANRLGIWHIKWELEDLAFKYLEPDAYREIQEHVAEK 225

Query: 340 YKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQ 399
               E++L +A ++L ++IE      L     +I    K  YSIY+ + + +   +E+  
Sbjct: 226 RTAREEKLNKAKEVLRERIEQAGIKCL-----DISGRPKHLYSIYQKMQRQQKEFHEIYD 280

Query: 400 IAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLH 459
           +A LRII++              + CY  L +VH  + PIP   KDYI  PKPN YQSLH
Sbjct: 281 LAALRIIVE------------TNEECYRALAVVHDAFCPIPGRFKDYIGLPKPNRYQSLH 328

Query: 460 TTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTV 519
           T +I         LEVQIRT EM  +AE GIAAH+  +   TG             G T 
Sbjct: 329 TCVIGLTGRP---LEVQIRTMEMHHVAEYGIAAHWKYK--ETG-------------GSTA 370

Query: 520 CLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPK 579
            +   +   + +WL  + +WQ +      ++E++D++  +L    V+VFTP+G++  L  
Sbjct: 371 QVTGTD--EKFAWLRQLLDWQSDL---KDAQEYLDSVKDNLFEDDVYVFTPKGDVVALSP 425

Query: 580 GATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
           G+T +D+AY IHTE+GN    A+VNG +V  +  L N ++V+IIT
Sbjct: 426 GSTSIDFAYRIHTEVGNHCAGARVNGRIVPLSTRLQNGDIVDIIT 470


>gi|313888521|ref|ZP_07822188.1| GTP diphosphokinase [Peptoniphilus harei ACS-146-V-Sch2b]
 gi|312845550|gb|EFR32944.1| GTP diphosphokinase [Peptoniphilus harei ACS-146-V-Sch2b]
          Length = 475

 Score =  328 bits (842), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 193/486 (39%), Positives = 290/486 (59%), Gaps = 52/486 (10%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           SY    ++++++RA  +A E H GQKR SGE +IIHP+ V+ IL ++ +D  +I AGLLH
Sbjct: 13  SYNENADIDMIKRAYKMADEHHRGQKRNSGEDYIIHPLNVSLILADMNMDIATIVAGLLH 72

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT+V T E ++ EFG  +  +V+G   V+KL +L  KN+    ++ +A+++R+M L
Sbjct: 73  DVVEDTDV-TLEDVKNEFGQEIADLVDG---VTKLKQLNYKNK----EEKQAENIRKMVL 124

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM +++RVIIVKLADRLHNMRTL +M   K+   A ET++++AP+A  LGM +IK ELE+
Sbjct: 125 AMAKDIRVIIVKLADRLHNMRTLEYMTDAKKIEKAKETVEIYAPIADRLGMSRIKWELED 184

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
           LS  Y + E Y +    + D+  +   E E+    +++ +E++  L  + ++ EI+   K
Sbjct: 185 LSLRYLDEEGYYE----LVDMVNKRRNEREDLINHIIELLEEN--LKNVGIECEIKGRPK 238

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIYK + K     +E+  ++ +RI            L    + CY  LG+VH ++ P
Sbjct: 239 NFYSIYKKMKKKGKVFDEIYDLSAVRI------------LTHSVKDCYGALGVVHTLFKP 286

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           IP   KDYIA PKPN YQSLHTT+I    E+    EVQIRT EM   AE GIAAH+  + 
Sbjct: 287 IPGRFKDYIAMPKPNKYQSLHTTVIDNNGET---FEVQIRTYEMHQTAEYGIAAHWKYKA 343

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
            V+               K    +       ++WL  + EWQ++        +F+DT+  
Sbjct: 344 GVS---------------KETAFDE-----NLTWLRQLLEWQKDL---NDPGDFMDTLKI 380

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           D     VFVFTPRG++ NLP+G+T +D+AY IH+++GN  V AKVNG +V   + L +  
Sbjct: 381 DFFADEVFVFTPRGDVINLPEGSTPIDFAYRIHSQVGNTCVGAKVNGRIVPLNYTLQSGN 440

Query: 619 VVEIIT 624
           +V++IT
Sbjct: 441 IVDVIT 446


>gi|328957461|ref|YP_004374847.1| GTP pyrophosphokinase [Carnobacterium sp. 17-4]
 gi|328673785|gb|AEB29831.1| GTP pyrophosphokinase (RelA/SpoT) [Carnobacterium sp. 17-4]
          Length = 736

 Score =  328 bits (842), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 189/488 (38%), Positives = 288/488 (59%), Gaps = 49/488 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T++Y++ + +  V++A   A  AH  Q R+SGEP+IIHP++VA IL EL++D  ++A G 
Sbjct: 16  TVTYMNSSHVAFVKKACDFATNAHKDQFRKSGEPYIIHPIQVAGILAELKMDPVTVATGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT   TFE I  EF   V  +V+G   V+KLGK+K K    S ++ +A++ R+M
Sbjct: 76  LHDVVEDTEY-TFEDISREFSPEVAMLVDG---VTKLGKIKYK----SHEEQQAENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            LAM +++RVI+VKLADRLHN+RTL    P KQ  IA ETL+V+APLA  LG+  IK EL
Sbjct: 128 LLAMAKDLRVIMVKLADRLHNLRTLKFHRPEKQRRIANETLEVYAPLAHRLGINLIKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+ S  Y N + Y ++   +    +E EK + ++    + KIE+   ++ + +  +I   
Sbjct: 188 EDTSLRYLNPQQYYRIVHLMNSKREEREKYITDS----ISKIEES--VEELNISADITGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSIY+ +   +   +++  +  +R+I+               + CY VLG +H  W
Sbjct: 242 PKHIYSIYRKMRDQKKQFDQIYDLLAIRVIV------------DSIKDCYAVLGAIHTRW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA PK N YQS+HTT+I    E    +EVQIRT+EM  +AE G+AAH++ 
Sbjct: 290 KPMPGRFKDYIAMPKSNMYQSIHTTVIG---EFGKPIEVQIRTKEMHAVAEYGVAAHWAY 346

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +                  G T  + + +   +ISW   I E Q+E   +  + +F++++
Sbjct: 347 K-----------------EGITRKVEDDSDGKKISWFRDIIELQDE---SSDASDFMESV 386

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             D+   +V+VFTP+G++  LP GA  +D+A+ IHTEIGNK   AKVNG +V   + L  
Sbjct: 387 KEDIFKDKVYVFTPKGDVSELPSGAGPLDFAFNIHTEIGNKTTGAKVNGKIVPLNYKLKT 446

Query: 617 AEVVEIIT 624
            +++EI+T
Sbjct: 447 GDIIEILT 454


>gi|392426696|ref|YP_006467690.1| (p)ppGpp synthetase, RelA/SpoT family [Desulfosporosinus
           acidiphilus SJ4]
 gi|391356659|gb|AFM42358.1| (p)ppGpp synthetase, RelA/SpoT family [Desulfosporosinus
           acidiphilus SJ4]
          Length = 739

 Score =  328 bits (842), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 198/498 (39%), Positives = 290/498 (58%), Gaps = 49/498 (9%)

Query: 130 LWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
           LW  L+ T    +P   LE+V +A   A +AH  Q R SGE +I+HP+EVA+IL +LE+D
Sbjct: 6   LWIKLQNT----TPQARLEIVDKAYRFAEKAHRNQLRNSGEDYILHPLEVAQILADLEMD 61

Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
             +IAA LLHD VEDT   T   IE EFG  +  +V+G   V+KLG++  K    S  + 
Sbjct: 62  EATIAAALLHDVVEDTEY-TIADIEREFGPEIALLVDG---VTKLGRIAYK----SKVEQ 113

Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
           + ++LR+MFLAM +++RVI++KLADRLHNMRTL +    KQ  IA ETL++FAPLA  LG
Sbjct: 114 QVENLRKMFLAMAKDIRVILIKLADRLHNMRTLKYHSVEKQKEIAQETLEIFAPLANRLG 173

Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
           +++IK ELE+LSF Y   ++Y  +   +A   +E E  + E    + K+      L+ + 
Sbjct: 174 IFRIKWELEDLSFRYLKPQEYYDLVEGIALKRREREAYINEVIVQMRKR------LNEVE 227

Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
           +  +I    K  YSIY+ +      ++E+  +  +R+I++                CY  
Sbjct: 228 IYADIAGRPKHFYSIYRKMTTQHKELSEIYDLMAIRVIVE------------TVNDCYGA 275

Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAER 488
           LG++H +W PIP   KDYIA PKPN YQSLHTTLI    E     E+QIRT EM   +E 
Sbjct: 276 LGIIHTLWKPIPGRFKDYIAMPKPNMYQSLHTTLIG---EHGEPFEIQIRTCEMHRTSEY 332

Query: 489 GIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNA--NIALRISWLNAIREWQEEFVGN 546
           GIAAH+           +   + + P G     + A  N   ++SWL  + EWQ E   +
Sbjct: 333 GIAAHWK----------YKEASSKEPAGGGGGRSAASVNFEQKLSWLRQLLEWQHE---S 379

Query: 547 MTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGN 606
             + EF++++  DL    VFVFTP+G++  LP  +  VD+AY +HT++G++ V AK+NG 
Sbjct: 380 RDAGEFMESLKIDLFADTVFVFTPKGDVVELPADSCPVDFAYRVHTDVGHRCVGAKLNGR 439

Query: 607 LVSPTHVLANAEVVEIIT 624
           +V     LAN +++EI+T
Sbjct: 440 IVPLDTKLANGDIIEILT 457


>gi|170288003|ref|YP_001738241.1| (p)ppGpp synthetase I SpoT/RelA [Thermotoga sp. RQ2]
 gi|170175506|gb|ACB08558.1| (p)ppGpp synthetase I, SpoT/RelA [Thermotoga sp. RQ2]
          Length = 714

 Score =  328 bits (842), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 197/484 (40%), Positives = 280/484 (57%), Gaps = 52/484 (10%)

Query: 141 LSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDT 200
            +  E +L+ +A   A   H+GQKR SGEPFI HPVEV +IL  L +D  ++ A LLHD 
Sbjct: 26  FTREEKKLLIKAYEFARIVHEGQKRFSGEPFITHPVEVTKILAGLGVDVTTLVAALLHDV 85

Query: 201 VEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAM 260
           VED   V+ ++I++EFG  V RIV+G TKVS +     ++++      K + +++MF AM
Sbjct: 86  VEDGENVSLDQIKKEFGPEVARIVDGVTKVSSINAPIGRDQDSR---KKIETIQKMFFAM 142

Query: 261 TEEVRVIIVKLADRLHNMRTLSHMPPH-KQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
            E++RVI VKLADRLHNMRT+ ++    K+   A ETL+++APLA  LG+Y IKSELE+L
Sbjct: 143 AEDMRVIFVKLADRLHNMRTIHYVQDQEKKRYKAYETLEIYAPLAHKLGIYSIKSELEDL 202

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           +F     E+Y K+K+ VA+  KE EK   E   +L   +E+ +      +K  +    K 
Sbjct: 203 AFKVLYPEEYYKIKKLVAEKRKEREKRTNEYISLLKSALEEHK------IKAIVEGRYKH 256

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSI++ + +      E+  +  LR+I+K                CY VLG+VH IW P+
Sbjct: 257 YYSIWRKMREKGKKFEEIYDLIALRVIVKDVTT------------CYTVLGIVHNIWKPL 304

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK NGY+SLHTT+I    E    LE+QIR EEM   AE G+ AH+     
Sbjct: 305 PGRFKDYIAAPKSNGYRSLHTTVITGYGEP---LEIQIRDEEMHREAEYGLIAHW----- 356

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
               +   RP+ ++ +                W+  + +W++E     T  EF D I ++
Sbjct: 357 ----IYKERPDVKTAK---------------EWIERLLDWRKELAQGFT--EFED-IKKE 394

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           L    VFVFTP+G+I +LPKG+T +D+AY IHTEIG+    AKVNG +V   + L N +V
Sbjct: 395 LQMDEVFVFTPKGDILHLPKGSTPIDFAYAIHTEIGHHYSGAKVNGKIVPIDYQLKNGDV 454

Query: 620 VEII 623
           VEII
Sbjct: 455 VEII 458


>gi|410595250|ref|YP_006951977.1| Bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           agalactiae SA20-06]
 gi|410518889|gb|AFV73033.1| Bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
           agalactiae SA20-06]
          Length = 715

 Score =  328 bits (842), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 188/485 (38%), Positives = 288/485 (59%), Gaps = 50/485 (10%)

Query: 146 LELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTN 205
           L  V+ AL  A  AH  Q R+SGEP+IIHP++VA IL +L LD  ++A G LHD VEDT 
Sbjct: 2   LLFVKFALNYATAAHYYQARKSGEPYIIHPIQVAGILADLHLDAVTVACGFLHDVVEDTE 61

Query: 206 VVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVR 265
           + T + IE +FG  VR I++G   V+KLGK++ K+    +    A++ R+M +AM++++R
Sbjct: 62  I-TLDEIETDFGKDVRDIIDG---VTKLGKVEYKSHEEQL----AENHRKMLMAMSKDIR 113

Query: 266 VIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTN 325
           VI+VKLADRLHNMRTL H+   KQ  I+ ET++++APLA  LG+ +IK ELE+LSF Y N
Sbjct: 114 VILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELEDLSFRYLN 173

Query: 326 AEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYK 385
             ++ K    ++ +  E  +E EE   I++ KI    + +   +  +I    K  YSIY+
Sbjct: 174 ETEFYK----ISHMMSEKRREREELVDIIVDKIR--SYTEEQGLYGDIYGRPKHIYSIYR 227

Query: 386 AVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKD 445
            +   +   +++  +  +R I+  +  S V          Y ++G +H +W P+P   KD
Sbjct: 228 KMRDKKKRFDQIYDLIAIRCIM--ETASDV----------YAMVGYIHELWRPMPGRFKD 275

Query: 446 YIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVG 505
           YIA PK NGYQS+HTT    +Y     +E+QIRT+EM  +AE G+AAH++ +        
Sbjct: 276 YIAAPKANGYQSIHTT----VYGPKGPIEIQIRTKEMHQVAEFGVAAHWAYK-------- 323

Query: 506 HARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSRV 565
                    +G T  +N A  ++ + W+  + E Q+E   +  +++FVD++  D+   R+
Sbjct: 324 ---------KGITSKVNQAEQSVGMGWIQELVELQDE---SKDAKDFVDSVKEDIFTERI 371

Query: 566 FVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITY 625
           +VFTP G ++ LP+ +  +D+AY IHT++G K   AKVNG +V  T  L   +VVEIIT 
Sbjct: 372 YVFTPNGAVQELPRESGPIDFAYAIHTQVGEKATGAKVNGRMVPLTAKLKTGDVVEIITN 431

Query: 626 NVSFS 630
             SF 
Sbjct: 432 PNSFG 436


>gi|350566768|ref|ZP_08935408.1| GTP diphosphokinase [Peptoniphilus indolicus ATCC 29427]
 gi|348661692|gb|EGY78374.1| GTP diphosphokinase [Peptoniphilus indolicus ATCC 29427]
          Length = 493

 Score =  328 bits (842), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 195/489 (39%), Positives = 288/489 (58%), Gaps = 55/489 (11%)

Query: 138 ISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           I + +PN   E +R A  +A + H+GQKR SGE +IIHP+ VA IL E+ +D  +I AGL
Sbjct: 9   IKFYNPNANFEQIRLAFEIAKKNHEGQKRNSGEDYIIHPLNVAMILAEMNMDTPTIIAGL 68

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHDT+EDT V TFE +E+ FG  +  +V+G TK+ KL          + Q+ +A+++R+M
Sbjct: 69  LHDTIEDTEV-TFEDVEKNFGIEIAYLVDGVTKLKKLNYK-------NKQEKQAENIRKM 120

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            LAM +++RVIIVKLADRLHNMRTL +M   K+   A ET++++AP+A  LGM +IK EL
Sbjct: 121 VLAMAKDIRVIIVKLADRLHNMRTLEYMTDTKKHEKALETIEIYAPIADRLGMSKIKWEL 180

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEE-ANKILMKKIEDDQFLDLMTVKTEIRS 375
           E+LS  Y + + Y K    + D+  +  +E E+  N+I+    E  Q L  + +  +I  
Sbjct: 181 EDLSLRYIDPDKYYK----LVDMVNKRRQEREDLINRIIA---ELKQNLTKLGIVADING 233

Query: 376 VCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGI 435
             K  YSIYK +     +  E+  ++ +R+            L    + CY VLG+VH +
Sbjct: 234 RPKNFYSIYKKMEYKGKNFEEIYDLSAVRV------------LVEDIKDCYGVLGVVHTL 281

Query: 436 WTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYS 495
           W PIP   KDYIA PKPN YQSLHTT+I    E+    EVQIRT EM   AE GIAAH+ 
Sbjct: 282 WKPIPGRFKDYIAMPKPNKYQSLHTTVIDNHGET---FEVQIRTYEMHQTAEYGIAAHWK 338

Query: 496 GRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDT 555
            +  V+               K+   +       ++WL  + EWQ++        +F++T
Sbjct: 339 YKAGVS---------------KSTSFDE-----NLTWLRQLLEWQKDLSD---PNDFMET 375

Query: 556 ITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLA 615
           +  D     VFVFTP+G++ NLP+G+T +D+AY IH+++GN    AK+NG +VS  + L 
Sbjct: 376 LKVDFFADEVFVFTPQGDVINLPEGSTPLDFAYRIHSQVGNTCTGAKINGRIVSLDYKLK 435

Query: 616 NAEVVEIIT 624
           + +++E+IT
Sbjct: 436 SGDIIEVIT 444


>gi|398348042|ref|ZP_10532745.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Leptospira
           broomii str. 5399]
          Length = 674

 Score =  328 bits (842), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 193/498 (38%), Positives = 292/498 (58%), Gaps = 55/498 (11%)

Query: 126 SPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGEL 185
           + E L E +R     L P  LELV +A  ++ +AH GQ R SGEP+I+HP++V  IL EL
Sbjct: 9   TKEMLLEGVR---DRLGPESLELVEKAYKISEDAHQGQFRLSGEPYIVHPLQVGYILYEL 65

Query: 186 ELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSV 245
            LD + I+AG+LHD +EDT   T E +  +FG  + ++VEG TK+S++       ++ S 
Sbjct: 66  GLDEKVISAGILHDVIEDTKY-TRENMVSDFGTEITQLVEGVTKISEI-------KSQSR 117

Query: 246 QDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAK 305
           +   A+++R++ +A  +++RVI++KLAD+ HNMRTLS  PP KQ  IA ETL ++AP+A 
Sbjct: 118 ETEAAENIRKIIIATIQDIRVILIKLADKTHNMRTLSFQPPEKQRRIANETLSLYAPIAG 177

Query: 306 LLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLD 365
            LG+Y++KSELE+L+F     E+Y  +K+R+     E E+ +++   IL +++ +     
Sbjct: 178 RLGIYKVKSELEDLAFQVIYPEEYQDIKKRINVKKSEREEYIDKLQIILKQRLAE----- 232

Query: 366 LMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQIC 425
            + +  ++    K  +SIY+ +     + +E+  +  +RII                + C
Sbjct: 233 -ININAQVDGRAKHFFSIYRKMKTKEKTFDEIFDLRAIRII------------TDEIKDC 279

Query: 426 YHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLI 485
           Y VLG+VH +WTP+P   KDYIATPK N YQSLHTT+I         LEVQIRT EM+ I
Sbjct: 280 YGVLGIVHTLWTPVPGRFKDYIATPKTNMYQSLHTTVIG---PDGKPLEVQIRTAEMNAI 336

Query: 486 AERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVG 545
           AE GIAAH+   V+  G   HA  N R               L + WL  ++ WQ+    
Sbjct: 337 AEFGIAAHW---VYKEGKT-HA--NERH--------------LTVKWLEVLQSWQD---S 373

Query: 546 NMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNG 605
            +  +EF++ +  DL    VFVFTP+GEI  LPKGATV+D+A+ IHT++G     AK+N 
Sbjct: 374 ALDPKEFLEELKYDLHEDEVFVFTPKGEIIQLPKGATVLDFAFRIHTDVGLHCKGAKINN 433

Query: 606 NLVSPTHVLANAEVVEII 623
            ++     L + + VE++
Sbjct: 434 RMIPLRTELRSGDQVEVV 451


>gi|420143469|ref|ZP_14650966.1| GTP pyrophosphokinase [Lactococcus garvieae IPLA 31405]
 gi|391856340|gb|EIT66880.1| GTP pyrophosphokinase [Lactococcus garvieae IPLA 31405]
          Length = 741

 Score =  328 bits (842), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 186/491 (37%), Positives = 288/491 (58%), Gaps = 49/491 (9%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           +Y++  ++ LVR+AL  A  AH  Q R SGEP+IIHP++VA IL +L+LD  +++AG LH
Sbjct: 18  AYMNEKDILLVRKALQCASIAHAEQYRASGEPYIIHPIQVAGILAKLQLDAATVSAGFLH 77

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDTN +  + +E  FG  +  IV+G   V+KLGK++ K+    +    A++ R+M +
Sbjct: 78  DVVEDTNFIQSDLVEL-FGEEIANIVDG---VTKLGKVEYKSHEEQL----AENHRKMLM 129

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM++++RVI+VKLADRLHNMRTL ++ P KQ  I++ET+ ++APLA  LG+  IK ELE+
Sbjct: 130 AMSKDIRVILVKLADRLHNMRTLKNLRPDKQKRISSETMAIYAPLAHRLGIGSIKWELED 189

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
           LSF Y N  ++ +++  + +     E  +EE  + L ++++D Q      V  EI    K
Sbjct: 190 LSFRYLNETEFYRIRGLMNEKRAARENLVEEVIEKLNERMKDAQ------VDAEIYGRPK 243

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIY+ +   +   +E+  +  +R       C     L +     Y  LG +H +W P
Sbjct: 244 HIYSIYRKMHDKKKRFDEIYDLIAIR-------C-----LTNSTSDVYTTLGYIHDLWKP 291

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PK NGYQS+HTT    +Y     +E QIRT EM  IAE G+AAH++ + 
Sbjct: 292 MPGRFKDYIANPKANGYQSVHTT----VYGPKGPMEFQIRTHEMHQIAEYGVAAHWAYK- 346

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                           +G+   ++   I+  ++W+N + E QE+     ++ EFV  +  
Sbjct: 347 ----------------QGRKAKVDVHEISETLNWINELVELQEQ--SGDSAEEFVKAVQE 388

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           D+LG +++VFTP G ++ LP G+  +D+AY IHT++G+    AK+N  +    +VL   +
Sbjct: 389 DILGDKIYVFTPTGAVQELPAGSGPIDFAYAIHTQVGDHATGAKINERMQPLNYVLKTGD 448

Query: 619 VVEIITYNVSF 629
            VEIIT   SF
Sbjct: 449 KVEIITSKTSF 459


>gi|418994361|ref|ZP_13541996.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG290]
 gi|377744158|gb|EHT68136.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG290]
          Length = 729

 Score =  328 bits (842), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 192/498 (38%), Positives = 291/498 (58%), Gaps = 49/498 (9%)

Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
           E L    SYLS +E E V ++  +A+EAH GQ R++G P+I+HP++VA IL E+ LD  +
Sbjct: 11  EVLHKAKSYLSADEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPT 70

Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
           I AG LHD +EDT   TFE ++E F   V RIV+G TK+ K+ K + K E       +A+
Sbjct: 71  IVAGFLHDVIEDTPY-TFEDVKEMFNEEVARIVDGVTKLKKV-KYRSKEEQ------QAE 122

Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
           + R++F+A+ ++VRVI+VKLADRLHNMRTL  M   KQ  I+ ETL+++APLA  LG+  
Sbjct: 123 NHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMLREKQIRISRETLEIYAPLAHRLGINT 182

Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
           IK ELE+ +  Y +   Y     R+ +L K+   E E   +  + +I  +  +D M ++ 
Sbjct: 183 IKWELEDTALRYIDNVQYF----RIVNLMKKKRSEREAYIETAIDRIRTE--MDRMNIEG 236

Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
           +I    K  YSIY+ ++K +   +++  +  +R+I+            +    CY +LGL
Sbjct: 237 DINGRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV------------NSINDCYAILGL 284

Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
           VH +W P+P   KDYIA PK N YQSLHTT++     +   LE+QIRT +M  IAE G+A
Sbjct: 285 VHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVVG---PNGDPLEIQIRTFDMHEIAEHGVA 341

Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
           AH++ +                  GK V   +     +++WL   +E  E    +  ++E
Sbjct: 342 AHWAYK-----------------EGKKVSEKDQTYQNKLNWL---KELAEADHTSSDAQE 381

Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
           F++T+  DL   +V+ FTP  ++  LP GA  +D+AY IH+E+GNKM+ AKVNG +V   
Sbjct: 382 FMETLKYDLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPID 441

Query: 612 HVLANAEVVEIITYNVSF 629
           ++L   ++VEI T   S+
Sbjct: 442 YILQTGDIVEIRTSKHSY 459


>gi|302038556|ref|YP_003798878.1| GTP pyrophosphokinase [Candidatus Nitrospira defluvii]
 gi|300606620|emb|CBK42953.1| GTP pyrophosphokinase [Candidatus Nitrospira defluvii]
          Length = 727

 Score =  328 bits (842), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 192/486 (39%), Positives = 287/486 (59%), Gaps = 52/486 (10%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           SY    +L+LVRRA   + +AH+GQ RRSGEP+  HP+ VA +L  L+ D  +I AGLLH
Sbjct: 18  SYNVEADLDLVRRAYDFSAKAHEGQMRRSGEPYFRHPLAVAGLLTHLKTDVTAIVAGLLH 77

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           DT+EDT     E +E+ FG  V  +V+G   V+K+GK+  +N     ++ +A++ R+M L
Sbjct: 78  DTLEDTLATPLE-LEQRFGKDVVHLVDG---VTKIGKITFRN----YEEKQAENFRKMVL 129

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           +M +++RV+++KLADRLHNMRTL ++   K+  IA ETL+++APLA  LG+  IK+ELE+
Sbjct: 130 SMADDIRVVLIKLADRLHNMRTLEYLSEGKRQQIAQETLEIYAPLANRLGIGWIKNELED 189

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
           L   +   + Y  ++ RVA   ++ ++ + E   ++ K + +        ++ E+    K
Sbjct: 190 LCLKHLKPDVYESLRVRVAKRDEDRQQYIIEVIDLVKKAMAE------AGLQGEVSGRPK 243

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             Y IY+ + K   S  EV  +A LRII   K              CY +LG++H +W P
Sbjct: 244 HLYGIYQKMEKQSISFEEVYDLAALRIITDIKMN------------CYALLGVIHSLWRP 291

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PK N YQSLHTT++    E    +E QIRTEEM  ++E+GIAAH+  + 
Sbjct: 292 LPGRFKDYIAIPKSNMYQSLHTTVVGPQGE---HVEFQIRTEEMHRVSEQGIAAHWKYK- 347

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                  H R + +   GK             SWL    EW ++   N   R+F+D++  
Sbjct: 348 ------EHGRIDEKD--GKV-----------FSWLRQFVEWNQDLPDN---RQFMDSVKL 385

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           DL    V+VFTP+G +K LPKG+T VD+AY +HTEIG+  V AKVNG +V   H++ + +
Sbjct: 386 DLFHDVVYVFTPQGMVKELPKGSTPVDFAYSVHTEIGDHCVGAKVNGKIVPLKHMMESGD 445

Query: 619 VVEIIT 624
           +VEI+T
Sbjct: 446 MVEILT 451


>gi|94544772|gb|ABF34820.1| GTP pyrophosphokinase / Guanosine-3',5'-bis(Diphosphate)
           3'-pyrophosphohydrolase [Streptococcus pyogenes
           MGAS10270]
          Length = 743

 Score =  328 bits (842), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 184/492 (37%), Positives = 292/492 (59%), Gaps = 49/492 (9%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           +Y++  ++  V +AL  A  AH  Q R+SGEP+I+HP++VA IL +L LD  ++A G LH
Sbjct: 22  TYMTKADVAFVAKALSYATAAHFYQVRKSGEPYIVHPIQVAGILADLHLDAVTVACGFLH 81

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT++ T + IE +FG   R IV+G   V+KLGK++ K+    +    A++ R+M +
Sbjct: 82  DVVEDTDI-TLDEIEADFGHDARDIVDG---VTKLGKVEYKSHEEQL----AENHRKMLM 133

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM++++RVI+VKLADRLHNMRTL H+   KQ  I+ ET++++APLA  LG+ +IK ELE+
Sbjct: 134 AMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELED 193

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
           L+F Y N  ++ K    ++ + KE  +E E   + ++ K++   +     +  ++    K
Sbjct: 194 LAFRYLNETEFYK----ISHMMKEKRREREALVEAIVSKVK--TYTTQQGLFGDVYGRPK 247

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIY+ +   +   +++  +  +R +++             Q   Y ++G +H +W P
Sbjct: 248 HIYSIYRKMRDKKKRFDQIFDLIAIRCVME------------TQSDVYAMVGYIHELWRP 295

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PK NGYQS+HTT    +Y     +E+QIRT++M  +AE G+AAH++ + 
Sbjct: 296 MPGRFKDYIAAPKANGYQSIHTT----VYGPKGPIEIQIRTKDMHQVAEYGVAAHWAYK- 350

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                        +  RGK   +N A  A+ ++W+  + E Q+    N  + +FVD++  
Sbjct: 351 -------------KGVRGK---VNQAEQAVGMNWIKELVELQD--ASNGDAVDFVDSVKE 392

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           D+   R++VFTP G ++ LPK +  +D+AY IHT+IG K   AKVNG +V  T  L   +
Sbjct: 393 DIFSERIYVFTPTGAVQELPKESGPIDFAYAIHTQIGEKATGAKVNGRMVPLTAKLKTGD 452

Query: 619 VVEIITYNVSFS 630
           VVEIIT   SF 
Sbjct: 453 VVEIITNANSFG 464


>gi|225867804|ref|YP_002743752.1| GTP pyrophosphokinase [Streptococcus equi subsp. zooepidemicus]
 gi|225701080|emb|CAW97905.1| GTP pyrophosphokinase [Streptococcus equi subsp. zooepidemicus]
          Length = 739

 Score =  328 bits (841), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 185/491 (37%), Positives = 292/491 (59%), Gaps = 49/491 (9%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++  ++ELV++AL  A  AH  Q R+SGEP+I+HP++VA IL +L LD  ++A G LHD
Sbjct: 19  YMTDGDVELVQKALDYATAAHFYQVRKSGEPYIVHPIQVAAILADLHLDAVTVACGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            VEDT++ T E IE +FG  VR IV+G   V+KLGK++ K+    +    A++ R+M +A
Sbjct: 79  VVEDTDI-TLEDIEFDFGKDVRDIVDG---VTKLGKVEYKSHEEQL----AENHRKMLMA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M++++RVI+VKLADRLHNMRTL H+   KQ  I+ ET++++APLA  LG+ +IK ELE+L
Sbjct: 131 MSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELEDL 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           +F Y N  ++ K    ++ + +E  +E E     ++ KI+   +     +  ++    K 
Sbjct: 191 AFRYLNEIEFYK----ISHMMREKRREREALVDDIVTKIK--AYTTDQGLYGDVYGRPKH 244

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YS+Y+ +   +   +++  +  +R +++             Q   Y ++G +H +W P+
Sbjct: 245 IYSVYRKMRDKKKRFDQIFDLIAIRCVME------------TQSDVYAMVGYIHELWRPM 292

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK NGYQS+HTT    +Y     +E+QIRT+EM  +AE G+AAH++ +  
Sbjct: 293 PGRFKDYIAAPKTNGYQSIHTT----VYGPKGPIEIQIRTKEMHQVAEYGVAAHWAYK-- 346

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
                       +  RGK   +N A   + ++W+  + E Q     N  ++ FVD++  D
Sbjct: 347 ------------KGIRGK---INQAEQKVGMNWIKELVELQA--ASNGDAKGFVDSVKED 389

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           +   R++VFTP G ++ LPK +  +D+AY IHT++G K   AKVNG +V  T  L   +V
Sbjct: 390 IFSERIYVFTPTGAVQELPKDSGPIDFAYAIHTQVGEKATGAKVNGRMVPLTAKLKTGDV 449

Query: 620 VEIITYNVSFS 630
           VEI+T   SF 
Sbjct: 450 VEIVTNPNSFG 460


>gi|262283461|ref|ZP_06061227.1| GTP diphosphokinase [Streptococcus sp. 2_1_36FAA]
 gi|262260952|gb|EEY79652.1| GTP diphosphokinase [Streptococcus sp. 2_1_36FAA]
          Length = 738

 Score =  328 bits (841), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 188/494 (38%), Positives = 292/494 (59%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YL+  ++  V++AL+ A + H GQ R+SGEP+I+HP++VA IL +L+LD  ++A G 
Sbjct: 16  TRKYLAAEDVAFVQKALVYAVDCHSGQFRKSGEPYIVHPIQVAGILAKLKLDAVTVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT+  + + +E EFG  VR IV+G   V+KLGK+K K+    +    A++ R+M
Sbjct: 76  LHDVVEDTDA-SLDDLEREFGPDVRTIVDG---VTKLGKVKYKSHEEQL----AENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM+E++RVI+VKLADRLHNMRTL H+   KQ  I+ ET++++APLA  LG+  +K EL
Sbjct: 128 LMAMSEDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISSVKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y N  ++ K+   + +  +E E  +EE    ++ KIE   +     +  +I   
Sbjct: 188 EDLSFRYLNEVEFYKISHMMKEKRREREALVEE----VVSKIE--TYAAERHLHGKIYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSIY+ +   +   +E+  +  +R I++           +P  + Y +LG +H +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFDEIYDLIAIRCILE-----------TPSDV-YAMLGYIHELW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA  K NGYQS+HTT    +Y     +E QIRT+EM  +AE G+AAH++ 
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  + G V                 ++   A+ ++W+  + E Q E   +  ++EFVD++
Sbjct: 346 KKGIKGKV-----------------DSKESAIGMNWIQELMELQAE---SGDAKEFVDSV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             + L   ++VFTP G ++ LPK +  +D+AY IHT++G +   AKVNG +V  T  L  
Sbjct: 386 KENYLAEEIYVFTPDGSVRALPKDSGPIDFAYEIHTKVGERATGAKVNGRMVPLTTKLKT 445

Query: 617 AEVVEIITYNVSFS 630
            + VEIIT   SF 
Sbjct: 446 GDQVEIITSANSFG 459


>gi|398342460|ref|ZP_10527163.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Leptospira
           inadai serovar Lyme str. 10]
          Length = 674

 Score =  328 bits (841), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 193/498 (38%), Positives = 292/498 (58%), Gaps = 55/498 (11%)

Query: 126 SPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGEL 185
           + E L E +R     L P  LELV +A  ++ EAH GQ R SGEP+I+HP++V  IL EL
Sbjct: 9   TKEMLLEGVR---DRLGPESLELVEKAYKVSEEAHQGQFRLSGEPYIVHPLQVGYILYEL 65

Query: 186 ELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSV 245
            LD + I+AG+LHD +EDT   T + +  +FG  + ++VEG TK+S++       ++ S 
Sbjct: 66  GLDEKVISAGILHDVIEDTKY-TRDNMVSDFGTEITQLVEGVTKISEI-------KSQSR 117

Query: 246 QDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAK 305
           +   A+++R++ +A  +++RVI++KLAD+ HNMRTLS  PP KQ  IA ETL ++AP+A 
Sbjct: 118 ETEAAENIRKIIIATIQDIRVILIKLADKTHNMRTLSFQPPEKQRRIANETLSLYAPIAG 177

Query: 306 LLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLD 365
            LG+Y++KSELE+L+F     E+Y  +K+R+     E E+ +++   IL +++ +     
Sbjct: 178 RLGIYKVKSELEDLAFQVIYPEEYQDIKKRINVKKSEREEYIDKLQIILKQRLAE----- 232

Query: 366 LMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQIC 425
            + +  ++    K  +SIY+ +     + +E+  +  +RII                + C
Sbjct: 233 -ININAQVDGRAKHFFSIYRKMKTKEKTFDEIFDLRAIRII------------TDEIKDC 279

Query: 426 YHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLI 485
           Y VLG+VH +WTP+P   KDYIATPK N YQSLHTT+I         LEVQIRT EM+ I
Sbjct: 280 YGVLGIVHTLWTPVPGRFKDYIATPKTNMYQSLHTTVIG---PDGKPLEVQIRTAEMNAI 336

Query: 486 AERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVG 545
           AE GIAAH+   V+  G   HA  N R               L + WL  ++ WQ+    
Sbjct: 337 AEFGIAAHW---VYKEGKT-HA--NERH--------------LTVKWLEVLQSWQD---S 373

Query: 546 NMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNG 605
            +  +EF++ +  DL    VFVFTP+GEI  LPKGATV+D+A+ IHT++G     AK+N 
Sbjct: 374 ALDPKEFLEELKYDLHEDEVFVFTPKGEIIQLPKGATVLDFAFRIHTDVGLHCKGAKINS 433

Query: 606 NLVSPTHVLANAEVVEII 623
            ++     L + + VE++
Sbjct: 434 RMIPLRTELRSGDQVEVV 451


>gi|117922244|ref|YP_871436.1| bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis
           pyrophosphate 3'-pyrophosphohydrolase [Shewanella sp.
           ANA-3]
 gi|117614576|gb|ABK50030.1| (p)ppGpp synthetase I, SpoT/RelA [Shewanella sp. ANA-3]
          Length = 700

 Score =  328 bits (841), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 200/503 (39%), Positives = 290/503 (57%), Gaps = 65/503 (12%)

Query: 130 LWEDLRPTIS-YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
           L+E L+ + S YL P ++EL+++A  +A +AH+GQ R SGEP+I HPV VARIL E+ LD
Sbjct: 3   LFEGLKESASGYLEPEQVELLKQAYQVARDAHEGQMRTSGEPYITHPVAVARILAEMRLD 62

Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
            E++ A LLHDT+EDT+V T E + E+FG  V  +VEG   VSKL KLK +++    ++ 
Sbjct: 63  HETLMAALLHDTIEDTHV-TKEDLAEQFGEAVAELVEG---VSKLDKLKFRDK----KEA 114

Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
           +A++ R+M +AMT+++RVI++KLADR HNMRTL  + P K+  IA ETL+++AP+A  LG
Sbjct: 115 QAENFRKMMMAMTQDIRVILIKLADRTHNMRTLGALRPDKRRRIARETLEIYAPIANRLG 174

Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQF--LDL 366
           ++ IK+ELE+L F     + Y  ++ RV    KE  K      K L++ IE      L+ 
Sbjct: 175 IHNIKTELEDLGF-----QAYYPMRYRV---LKEVVKAARGNRKELIQGIEAAVLTRLND 226

Query: 367 MTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICY 426
             +K +++   K  YSIY  +        EV  I   R+I+                 CY
Sbjct: 227 AGIKGKVKGREKNLYSIYNKMQSKELQFQEVMDIYAFRVIVDSIDT------------CY 274

Query: 427 HVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTL-----IPFLYESMFRLEVQIRTEE 481
            VLG +HG++ P P   KDYIA PK NGYQSLHT+L     +P        +E+QIRTE+
Sbjct: 275 RVLGAMHGLYKPRPGRFKDYIAIPKANGYQSLHTSLFGPHGVP--------VEIQIRTED 326

Query: 482 MDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQE 541
           MD +A++G+AAH+            A   G   +G T  +          W+ ++ E Q+
Sbjct: 327 MDQMADKGVAAHW------------AYKGGADGQGTTTQVRAR------KWMQSLLELQQ 368

Query: 542 EFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAA 601
                 TS EFV+ +  +L    ++VFTP G I  LP  AT VD+AY +HT++GN  V A
Sbjct: 369 ---SASTSFEFVENVKTELFPEEIYVFTPEGRILELPVNATAVDFAYEVHTDVGNTCVGA 425

Query: 602 KVNGNLVSPTHVLANAEVVEIIT 624
           +VN      +  L + + VEIIT
Sbjct: 426 RVNRQAYPLSQPLISGQTVEIIT 448


>gi|357012698|ref|ZP_09077697.1| RelA [Paenibacillus elgii B69]
          Length = 731

 Score =  328 bits (841), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 190/491 (38%), Positives = 283/491 (57%), Gaps = 51/491 (10%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           +Y+  N+L+ +R A   A +AH GQ R+SGEP+I+HP+ VA IL  +++D  SI A LLH
Sbjct: 12  TYVKENDLKRIREAYEFADQAHYGQVRKSGEPYILHPLAVADILVNMQMDTTSIIAALLH 71

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT V + E + E+FGAT   IV+G TK+ K+ K K K E+ +      ++ R+MF+
Sbjct: 72  DVVEDTTV-SLETVHEKFGATCAMIVDGLTKLEKI-KFKSKEEHQN------ENYRKMFV 123

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM +++RVI++KLADRLHNMRTL H     Q  IA ETL++F P+A  LG+  IK E+E+
Sbjct: 124 AMAQDIRVILIKLADRLHNMRTLKHQSEEAQRRIADETLEIFCPIAHRLGISAIKWEMED 183

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
           ++  Y N + Y ++   +     E E+ L +    + +K+++      M +  +I    K
Sbjct: 184 IALRYLNPQQYYRIVNLMQKKRAEREQYLSDVIASVGEKLQE------MGIDGDISGRPK 237

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIYK +       NE+  +  LRII+               + CY  LG++H +W P
Sbjct: 238 HIYSIYKKMTVKSKQFNEIYDLLALRIIV------------DNIKDCYATLGIIHTLWKP 285

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PKPN YQSLHTT+I    E    LEVQIRT EM   +E G+AAH++ + 
Sbjct: 286 MPGRFKDYIAMPKPNMYQSLHTTVIGPKGEP---LEVQIRTFEMHRTSEYGVAAHWAYK- 341

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                 G + P+G             +   ++ ++  I E Q +      ++EFV+++  
Sbjct: 342 -----EGTSVPSG-------------SYEDKMHFIREILELQND---TQDAQEFVESLKM 380

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           D     VFVFTP+GE+  LP G+  +D+AY IHTE+GN+ + AKVNG +V   H L   +
Sbjct: 381 DFFSDLVFVFTPKGEVIELPAGSVPLDFAYRIHTEVGNRTIGAKVNGRIVPLDHKLKTGD 440

Query: 619 VVEIITYNVSF 629
           ++EI+T   S+
Sbjct: 441 IIEILTSKHSY 451


>gi|70726288|ref|YP_253202.1| GTP pyrophosphokinase [Staphylococcus haemolyticus JCSC1435]
 gi|68447012|dbj|BAE04596.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) (PPGPP
           synthetase I) ((P)PPGPP synthetase) [Staphylococcus
           haemolyticus JCSC1435]
          Length = 729

 Score =  328 bits (841), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 190/498 (38%), Positives = 291/498 (58%), Gaps = 49/498 (9%)

Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
           E L    SYLS ++ + V ++  +A+EAH GQ R++G P+I+HP++VA IL E+ LD  +
Sbjct: 11  EVLNKAKSYLSTDDYQYVLKSYHIAYEAHQGQFRKNGLPYIMHPIQVAGILTEMRLDGPT 70

Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
           I AG LHD +EDT   TF+ +++ F   + RIV+G TK+ K+ K + K E       +A+
Sbjct: 71  IVAGFLHDVIEDTPY-TFDDVKDMFNEEIARIVDGVTKLKKV-KYRSKEEQ------QAE 122

Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
           + R++F+A+ ++VRVI+VKLADRLHNMRTL  M   KQ  I+ ETL+++APLA  LG+  
Sbjct: 123 NHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMAREKQVRISKETLEIYAPLAHRLGINT 182

Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
           IK ELE+ +  Y ++  Y     R+ +L K+   E E      + KI+ +     M +  
Sbjct: 183 IKWELEDTALRYIDSVQYF----RIVNLMKKKRSEREAYIANAIDKIQTEMI--KMDITG 236

Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
           EI    K  YSIY+ ++K +   +++  +  +R+I+            +    CY +LGL
Sbjct: 237 EISGRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV------------NSINDCYAILGL 284

Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
           VH +W P+P   KDYIA PK N YQSLHTT++     +   LE+QIRT EM  IAE G+A
Sbjct: 285 VHTLWKPMPGRFKDYIAMPKQNMYQSLHTTVVG---PNGDPLEIQIRTYEMHEIAEHGVA 341

Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
           AH++ +                  GKTV   N +   +++WL   +E  E    +  ++E
Sbjct: 342 AHWAYK-----------------EGKTVNEKNQDFQNKLNWL---KELAEADHTSSDAQE 381

Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
           F++++  DL   +V+ FTP  ++  LP GA  +D+AY IH+E+GNKM+ AKVNG +V   
Sbjct: 382 FMESLKYDLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPID 441

Query: 612 HVLANAEVVEIITYNVSF 629
           +VL   +++EI T   S+
Sbjct: 442 YVLQTGDIIEIRTSKHSY 459


>gi|420157993|ref|ZP_14664817.1| putative GTP diphosphokinase [Clostridium sp. MSTE9]
 gi|394755340|gb|EJF38587.1| putative GTP diphosphokinase [Clostridium sp. MSTE9]
          Length = 725

 Score =  328 bits (841), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 192/501 (38%), Positives = 296/501 (59%), Gaps = 53/501 (10%)

Query: 125 DSPERLWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILG 183
           D+  + ++DL   +     + +L+L+ RA  LA  +H GQKR SG+P+IIHPV VA IL 
Sbjct: 3   DTTSKTYDDLLQAMETSGHDFDLDLIGRAYRLAESSHTGQKRLSGQPYIIHPVSVACILV 62

Query: 184 ELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENH 243
           EL +D ES+AAGLLHD VEDT+V   ++I ++FG+ +  +++G   V+KLG++       
Sbjct: 63  ELGMDSESVAAGLLHDVVEDTSV-GLDQIRKQFGSDIASLIDG---VTKLGRIPYS---- 114

Query: 244 SVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPL 303
           S ++ +A+++R+M +AM+E++RVII+KLADRLHNMRTL +M P KQ   A E ++V+AP+
Sbjct: 115 SREEQQAENIRKMLIAMSEDIRVIIIKLADRLHNMRTLEYMTPQKQRDKALENMEVYAPI 174

Query: 304 AKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQF 363
           A  LG+  IK ELE+LS  Y +   Y +++  +    K+ +  +E    ++  ++     
Sbjct: 175 AHRLGIRAIKEELEDLSLRYLDPIAYQEIENTLELRKKDRDHFIETTKALVYDRVSR--- 231

Query: 364 LDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQ 423
              M     ++   K  + IY+ V     S++E+  I  +R+I+                
Sbjct: 232 ---MIPNVYLQGRVKSIHGIYRKVFMQGRSMDEIYDIYAVRVIV------------DTVN 276

Query: 424 ICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMD 483
            CY+VLG++H ++ P+P   KDYI+TPKPN YQSLHTT+I    +     EVQIRT EM 
Sbjct: 277 DCYNVLGIIHDMFRPLPNRFKDYISTPKPNMYQSLHTTVIG---KEGIPFEVQIRTWEMH 333

Query: 484 LIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEF 543
             AE GIAAH+    +  GL            GK   L N     R++W+  + E Q+  
Sbjct: 334 HTAEYGIAAHWK---YKLGLA-----------GKGDSLEN-----RLAWIRQMLENQK-- 372

Query: 544 VGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKV 603
             +  + + V  I  DL+   VFVFTP+GE+ NLP GATV+D+AY IH+ +GN+M+ AKV
Sbjct: 373 --DSDATDIVRNIKSDLVPEEVFVFTPKGEVINLPMGATVIDFAYAIHSAVGNRMIGAKV 430

Query: 604 NGNLVSPTHVLANAEVVEIIT 624
           +  +V   + + N E++E++T
Sbjct: 431 DKRIVPIDYKVKNGEIIEVLT 451


>gi|414564881|ref|YP_006043842.1| GTP pyrophosphokinase RelA [Streptococcus equi subsp. zooepidemicus
           ATCC 35246]
 gi|338847946|gb|AEJ26158.1| GTP pyrophosphokinase RelA [Streptococcus equi subsp. zooepidemicus
           ATCC 35246]
          Length = 739

 Score =  328 bits (841), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 185/491 (37%), Positives = 292/491 (59%), Gaps = 49/491 (9%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++  ++ELV++AL  A  AH  Q R+SGEP+I+HP++VA IL +L LD  ++A G LHD
Sbjct: 19  YMTDGDVELVQKALDYATAAHFYQVRKSGEPYIVHPIQVAAILADLHLDAVTVACGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            VEDT++ T E IE +FG  VR IV+G   V+KLGK++ K+    +    A++ R+M +A
Sbjct: 79  VVEDTDI-TLEDIEFDFGKDVRDIVDG---VTKLGKVEYKSHEEQL----AENHRKMLMA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M++++RVI+VKLADRLHNMRTL H+   KQ  I+ ET++++APLA  LG+ +IK ELE+L
Sbjct: 131 MSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELEDL 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           +F Y N  ++ K    ++ + +E  +E E     ++ KI+   +     +  ++    K 
Sbjct: 191 AFRYLNEIEFYK----ISHMMREKRREREALVDDIVTKIK--AYTTEQGLYGDVYGRPKH 244

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YS+Y+ +   +   +++  +  +R +++             Q   Y ++G +H +W P+
Sbjct: 245 IYSVYRKMRDKKKRFDQIFDLIAIRCVME------------TQSDVYAMVGYIHELWRPM 292

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK NGYQS+HTT    +Y     +E+QIRT+EM  +AE G+AAH++ +  
Sbjct: 293 PGRFKDYIAAPKTNGYQSIHTT----VYGPKGPIEIQIRTKEMHQVAEYGVAAHWAYK-- 346

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
                       +  RGK   +N A   + ++W+  + E Q     N  ++ FVD++  D
Sbjct: 347 ------------KGIRGK---VNQAEQKVGMNWIKELVELQA--ASNGDAKGFVDSVKED 389

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           +   R++VFTP G ++ LPK +  +D+AY IHT++G K   AKVNG +V  T  L   +V
Sbjct: 390 IFSERIYVFTPTGAVQELPKDSGPIDFAYAIHTQVGEKATGAKVNGRMVPLTAKLKTGDV 449

Query: 620 VEIITYNVSFS 630
           VEI+T   SF 
Sbjct: 450 VEIVTNPNSFG 460


>gi|195978873|ref|YP_002124117.1| GTP pyrophosphokinase [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
 gi|195975578|gb|ACG63104.1| GTP pyrophosphokinase RelA [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
          Length = 739

 Score =  328 bits (841), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 185/491 (37%), Positives = 292/491 (59%), Gaps = 49/491 (9%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++  ++ELV++AL  A  AH  Q R+SGEP+I+HP++VA IL +L LD  ++A G LHD
Sbjct: 19  YMTDGDVELVQKALDYATAAHFYQIRKSGEPYIVHPIQVAAILADLHLDAVTVACGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            VEDT++ T E IE +FG  VR IV+G   V+KLGK++ K+    +    A++ R+M +A
Sbjct: 79  VVEDTDI-TLEDIEFDFGKDVRDIVDG---VTKLGKVEYKSHEEQL----AENHRKMLMA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M++++RVI+VKLADRLHNMRTL H+   KQ  I+ ET++++APLA  LG+ +IK ELE+L
Sbjct: 131 MSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELEDL 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           +F Y N  ++ K    ++ + +E  +E E     ++ KI+   +     +  ++    K 
Sbjct: 191 AFRYLNEIEFYK----ISHMMREKRREREALVDDIVTKIK--AYTTEQGLYGDVYGRPKH 244

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YS+Y+ +   +   +++  +  +R +++             Q   Y ++G +H +W P+
Sbjct: 245 IYSVYRKMRDKKKRFDQIFDLIAIRCVME------------TQSDVYAMVGYIHELWRPM 292

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK NGYQS+HTT    +Y     +E+QIRT+EM  +AE G+AAH++ +  
Sbjct: 293 PGRFKDYIAAPKTNGYQSIHTT----VYGPKGPIEIQIRTKEMHQVAEYGVAAHWAYK-- 346

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
                       +  RGK   +N A   + ++W+  + E Q     N  ++ FVD++  D
Sbjct: 347 ------------KGIRGK---VNQAEQKVGMNWIKELVELQA--ASNGDAKGFVDSVKED 389

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           +   R++VFTP G ++ LPK +  +D+AY IHT++G K   AKVNG +V  T  L   +V
Sbjct: 390 IFSERIYVFTPTGAVQELPKDSGPIDFAYAIHTQVGEKATGAKVNGRMVPLTAKLKTGDV 449

Query: 620 VEIITYNVSFS 630
           VEI+T   SF 
Sbjct: 450 VEIVTNPNSFG 460


>gi|282897317|ref|ZP_06305319.1| GTP pyrophosphokinase [Raphidiopsis brookii D9]
 gi|281197969|gb|EFA72863.1| GTP pyrophosphokinase [Raphidiopsis brookii D9]
          Length = 756

 Score =  328 bits (840), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 193/481 (40%), Positives = 280/481 (58%), Gaps = 48/481 (9%)

Query: 144 NELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVED 203
           N+  LV  AL  A+E H+GQ R+SGEP+I HPV VA +L +L  +   IAAG LHD VED
Sbjct: 38  NDNSLVCNALKFAYELHEGQHRKSGEPYIAHPVAVADLLKDLGGNAPMIAAGFLHDVVED 97

Query: 204 TNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEE 263
           T V T E IE++FG  VR++VEG TK+SK+     K E+      +A++ R+MFL+M ++
Sbjct: 98  TEV-TIEEIEQKFGHEVRQLVEGVTKLSKIN-FTSKTES------QAENFRRMFLSMAQD 149

Query: 264 VRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMY 323
           +RVI+VKLADRLHNMRTL +M    +   A ET  +FAPLA  LG++ IK ELE+L+F Y
Sbjct: 150 IRVIVVKLADRLHNMRTLQYMSETSRRRSAQETRDIFAPLANRLGIWHIKWELEDLAFKY 209

Query: 324 TNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSI 383
              + Y +++  VA+     E++L +A ++L ++IE      L     +I    K  YSI
Sbjct: 210 LEPDAYREIQEHVAEKRTAREEKLNKAKEVLRERIEQAGIKCL-----DISGRPKHLYSI 264

Query: 384 YKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAM 443
           Y+ + + +   +E+  +A LRII++              + CY  L +VH  + PIP   
Sbjct: 265 YQKMQRQQKEFHEIYDLAALRIIVE------------TNEECYRALAVVHDAFCPIPGRF 312

Query: 444 KDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGL 503
           KDYI  PKPN YQSLHT +I         LEVQIRT EM  +AE GIAAH+  +   TG 
Sbjct: 313 KDYIGLPKPNRYQSLHTGVIGLTGRP---LEVQIRTMEMHQVAEYGIAAHWKYK--ETG- 366

Query: 504 VGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGS 563
                       G T      +   + +WL  + +WQ +      + E++D++  +L   
Sbjct: 367 ------------GSTAQATGTD--EKFAWLGQLLDWQSDL---KDAEEYLDSVKDNLFED 409

Query: 564 RVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEII 623
            V+VFTP+G++  L  G+T +D+AY IHTE+GN    ++VNG +V  +  L N ++V+II
Sbjct: 410 DVYVFTPKGDVVALSPGSTSIDFAYRIHTEVGNHCAGSRVNGRIVPLSTRLQNGDIVDII 469

Query: 624 T 624
           T
Sbjct: 470 T 470


>gi|423062390|ref|ZP_17051180.1| (p)ppGpp synthetase I SpoT/RelA [Arthrospira platensis C1]
 gi|406716298|gb|EKD11449.1| (p)ppGpp synthetase I SpoT/RelA [Arthrospira platensis C1]
          Length = 741

 Score =  328 bits (840), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 196/484 (40%), Positives = 274/484 (56%), Gaps = 48/484 (9%)

Query: 141 LSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDT 200
            SP+  +L+ RA + A++ H GQ R+SGEP+I HP+ VA IL  L  D   +AAG LHD 
Sbjct: 15  FSPDN-DLISRAFLFAYQLHKGQYRKSGEPYINHPIAVAGILRFLGSDTAMVAAGFLHDI 73

Query: 201 VEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAM 260
           +EDT+V T E +E  FG  VR +VEG TK+SK           +  + +A++ R+MFLAM
Sbjct: 74  IEDTDV-TPEELESHFGPEVRHLVEGVTKLSKFNF-------SNTTERQAENFRRMFLAM 125

Query: 261 TEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLS 320
            +++RVI+VKLADRLHNMRTL  M   KQ SIA ET ++FAPLA  LG+ ++K ELE+L+
Sbjct: 126 AQDIRVIVVKLADRLHNMRTLEFMSESKQRSIALETREIFAPLANRLGIGRLKWELEDLA 185

Query: 321 FMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEP 380
           F Y   E Y +++ RVAD     E++L     IL  ++E            E+    K  
Sbjct: 186 FKYIEPEAYREIQIRVADRRATREEKLAALADILRDRMEKSGIRCY-----EVTGRPKHL 240

Query: 381 YSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIP 440
           Y IYK + +     +E+  IA LR+I++              + CY  L +VH  + PIP
Sbjct: 241 YGIYKKMQERHKQFHEIYDIAALRLIVE------------TNEECYRALAIVHDSYRPIP 288

Query: 441 RAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFV 500
              KDYI  PKPN YQSLHT +I     +   +EVQIRT EM  +AE GIAAH+      
Sbjct: 289 GRFKDYIGLPKPNRYQSLHTGVIG---NTGRPVEVQIRTVEMHHVAEYGIAAHWK----- 340

Query: 501 TGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDL 560
                  +  G S  GK    +      + +WL  + EWQ +      ++E++DT+  +L
Sbjct: 341 ------YKETGGSEFGKLTETDE-----KFTWLRQLLEWQSDL---KDAQEYLDTVKNNL 386

Query: 561 LGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVV 620
               V+VFTP G++  L  GAT VD+AY +H+E+GN    AKVN  +V    VL N ++V
Sbjct: 387 FDEDVYVFTPDGDVMALSNGATTVDFAYRVHSEVGNHCKGAKVNERMVPLDTVLKNGDIV 446

Query: 621 EIIT 624
           EI+T
Sbjct: 447 EILT 450


>gi|342164246|ref|YP_004768885.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
           [Streptococcus pseudopneumoniae IS7493]
 gi|341934128|gb|AEL11025.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
           [Streptococcus pseudopneumoniae IS7493]
          Length = 740

 Score =  328 bits (840), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 189/494 (38%), Positives = 288/494 (58%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YL+  ++  V +AL+ A + H GQ R+SGEP+IIHP++VA IL +L+LD  ++A G 
Sbjct: 16  TKKYLTEEDVHFVHKALVYAVDCHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT+  T + +E EFG  VR IV+G   V+KLGK++ K+    +    A++ R+M
Sbjct: 76  LHDVVEDTDA-TLDDLEREFGPDVRVIVDG---VTKLGKVEYKSHEEQL----AENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM+E++RVI+VKL+DRLHNMRTL H+   KQ  I+ ET++++APLA  LG+  +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISKETMEIYAPLAHRLGISSVKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y N  ++ K    + ++ KE  +E E     ++ K+E  ++     +K +I   
Sbjct: 188 EDLSFRYLNPTEFYK----ITNMMKEKRREREALVDEVVTKLE--EYTIDRHLKGKIYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSI++ +   R    E+  +  +R I+              Q   Y +LG VH +W
Sbjct: 242 PKHIYSIFRKMQDKRKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHELW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA  K NGYQS+HTT    +Y     +E QIRT+ M  +AE G+AAH++ 
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKAMHEVAEYGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  V G V                 N+   A+ ++W+  + E Q++      ++EFVD++
Sbjct: 346 KKGVKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDSV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             + L   ++VFTP G +++LPK +  +D+AY IHT++G K   AKVNG +V  T  L  
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445

Query: 617 AEVVEIITYNVSFS 630
            + VEI+T   SF 
Sbjct: 446 GDQVEIVTNPNSFG 459


>gi|427418396|ref|ZP_18908579.1| (p)ppGpp synthetase, RelA/SpoT family [Leptolyngbya sp. PCC 7375]
 gi|425761109|gb|EKV01962.1| (p)ppGpp synthetase, RelA/SpoT family [Leptolyngbya sp. PCC 7375]
          Length = 763

 Score =  328 bits (840), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 194/478 (40%), Positives = 275/478 (57%), Gaps = 48/478 (10%)

Query: 147 ELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNV 206
           +LV RA   A++ H GQ R SGEP+I HPV VA IL  L  D   IAAG LHD VEDT+V
Sbjct: 47  QLVCRAFEFAYQLHKGQMRASGEPYIAHPVAVANILRSLGGDSAMIAAGFLHDVVEDTDV 106

Query: 207 VTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRV 266
            + + IE  FGA VR++VEG TK+SK  +   K E       +A++ R+MFLAM +++RV
Sbjct: 107 -SADEIEAHFGAEVRQMVEGVTKLSKF-QFNSKTER------QAENFRRMFLAMAQDIRV 158

Query: 267 IIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNA 326
           I+VKLADRLHNMRTL H+PP KQ   A ET+++FAPLA  LG+ ++K ELE+LSF Y   
Sbjct: 159 IVVKLADRLHNMRTLQHLPPEKQVQKACETIEIFAPLANRLGIGRMKWELEDLSFKYLEE 218

Query: 327 EDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKA 386
             Y ++K  +++   + E  L++  ++L   + +D          EI S  K  YSIY+ 
Sbjct: 219 SSYQEIKNLISEKRVDREARLKQVAELLETHLTNDGI-----NCVEISSRPKHLYSIYRK 273

Query: 387 VLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDY 446
           + + +   +++  IA +RII+            S +  CY  L +VH  + PIP   KDY
Sbjct: 274 MQRQKKDFHQIYDIAAVRIIV------------STKVECYRALAVVHDQFKPIPGRFKDY 321

Query: 447 IATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGH 506
           I  PK N YQSLHT +I    E    +EVQIRT EM  +AE GIAAH+  +         
Sbjct: 322 IGLPKANRYQSLHTAVIG---EQGRPIEVQIRTMEMHHVAEYGIAAHWKYK--------- 369

Query: 507 ARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSRVF 566
                    G +    NA    + +WL  + EWQ +      ++E++  +  +L    V+
Sbjct: 370 -------ETGNSNTKVNAEDE-KFTWLRQLLEWQSDL---KDAQEYLSDVKDNLFDEEVY 418

Query: 567 VFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
           VF+PRG++  L +GAT VD+AY IHTE+G+    AKVN  +V+    L N ++VE++T
Sbjct: 419 VFSPRGDVFALSQGATPVDFAYRIHTEVGHHCAGAKVNDRIVTLDTQLENGDIVEVLT 476


>gi|336395470|ref|ZP_08576869.1| GTP pyrophosphokinase [Lactobacillus farciminis KCTC 3681]
          Length = 743

 Score =  328 bits (840), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 193/499 (38%), Positives = 283/499 (56%), Gaps = 52/499 (10%)

Query: 126 SPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGEL 185
           +PE++ +  R    Y++   +E V +A   A   H  QKR +GEP+IIHP +VA+IL  L
Sbjct: 9   TPEQVLDICR---GYMNDEHVEFVNKAYNFAAYVHKEQKRATGEPYIIHPTQVAQILASL 65

Query: 186 ELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSV 245
            +D  ++AAG LHD VEDTNV T   ++E FG  V  IV+G TK+SK        + HS 
Sbjct: 66  HMDPYTVAAGYLHDVVEDTNV-TLGDVKELFGDQVATIVDGVTKISKY-------KYHSH 117

Query: 246 QDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAK 305
           Q++ A++ R+M LA  +++RVI+VKLADRLHNMRTL  + P KQ  IA ETL+++APLA 
Sbjct: 118 QELLAENHRKMLLATAKDLRVIMVKLADRLHNMRTLKALRPDKQRRIANETLEIYAPLAD 177

Query: 306 LLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLD 365
            LG+ +IK ELE+LS  Y N + Y ++   +     + E  + EA   + K +      D
Sbjct: 178 RLGISKIKWELEDLSLHYINPQQYYRIVHLMNSKRDQREAYIAEAIDYIKKNV------D 231

Query: 366 LMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQIC 425
            + +K +I    K  YSIYK +       +E+  +  +RI++               + C
Sbjct: 232 ALGIKYDIYGRPKHIYSIYKKMRDKHKQFSELYDLLAIRIVV------------DSVKDC 279

Query: 426 YHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLI 485
           Y VLG +H  W PIP   KDYIA PK NGYQSLHTT+I    +    LEVQIRT EM  +
Sbjct: 280 YAVLGSIHSKWKPIPGRFKDYIAVPKANGYQSLHTTIIGPGGQP---LEVQIRTFEMHQV 336

Query: 486 AERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVG 545
           AE G+AAH++ +                  G    ++  +   +I     I E QE    
Sbjct: 337 AEYGVAAHWAYK-----------------EGNFEGVHLDDNEQKIDVFREILELQE---N 376

Query: 546 NMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNG 605
           +  + +F+ ++  ++   RV+VFTP+GE+  LPKGA  +D+AY +HTE+GN  + AK+NG
Sbjct: 377 SDNASDFMKSVKGEIFNDRVYVFTPQGEVIELPKGAVTLDFAYQVHTEVGNHSIGAKING 436

Query: 606 NLVSPTHVLANAEVVEIIT 624
            +V   + L N ++VE++T
Sbjct: 437 RMVPLNYQLKNGDIVEMLT 455


>gi|256545119|ref|ZP_05472485.1| GTP diphosphokinase [Anaerococcus vaginalis ATCC 51170]
 gi|256399160|gb|EEU12771.1| GTP diphosphokinase [Anaerococcus vaginalis ATCC 51170]
          Length = 725

 Score =  328 bits (840), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 183/480 (38%), Positives = 278/480 (57%), Gaps = 49/480 (10%)

Query: 145 ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDT 204
           ++ L+++A   A   H GQKR SGE + IHP+ VA  +  ++LD ++I AGL+HD +EDT
Sbjct: 24  DINLIKKAYDFAEYHHRGQKRNSGEDYFIHPIAVATTISNMQLDDQTICAGLMHDVLEDT 83

Query: 205 NVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEV 264
             VT E+++E FG  +  +V+G TK+ KL   K K E       +A+++R+M LAM+ ++
Sbjct: 84  -PVTEEQMKENFGEEITFLVDGVTKLKKLN-YKTKEEK------QAENIRKMVLAMSNDI 135

Query: 265 RVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYT 324
           RVI++KLADRLHNMRTL +    KQ   A+ETL+++ PLA  LG+Y +K ELE+L F Y 
Sbjct: 136 RVILIKLADRLHNMRTLEYKTEKKQKQTASETLEIYVPLAHRLGIYTMKWELEDLCFRYQ 195

Query: 325 NAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIY 384
             E+Y ++ + V +  +E E  + +  + L      D+ L    +  EI    K  +SIY
Sbjct: 196 KPEEYYELAQMVHNKRREREAYINQIIETL------DKALSSSNINYEISGRPKGLFSIY 249

Query: 385 KAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMK 444
           K + +++   NE+  +  +R+            L      CY VLG VH IW PIP  +K
Sbjct: 250 KKMSRNKIEFNEIYDLTAVRV------------LVDTVADCYEVLGKVHSIWRPIPNRIK 297

Query: 445 DYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLV 504
           DYI  PKPNGY+SLHTT+     E     EVQIRT +M    E GIAAH+  +       
Sbjct: 298 DYIGQPKPNGYRSLHTTVFG---EDSKPFEVQIRTRQMHYECEYGIAAHWKYK------- 347

Query: 505 GHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSR 564
                     + K+   +      +++++  I EWQ+E   ++ S+EF+DT+  D     
Sbjct: 348 --------ENKSKSTEFDE-----KLTFIRQIMEWQKEGGKDVDSKEFLDTLKGDFFSKE 394

Query: 565 VFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
           +++++P+GEI +LP  +  +D+AY +HTE+GNK V AKVNG +V  +H L   +VVEI+T
Sbjct: 395 IYIYSPKGEIYSLPVNSCAIDFAYRVHTEVGNKCVGAKVNGKIVPFSHKLNTGDVVEILT 454


>gi|392972298|ref|ZP_10337690.1| GTP pyrophosphokinase [Staphylococcus equorum subsp. equorum Mu2]
 gi|403046373|ref|ZP_10901844.1| GTP pyrophosphokinase [Staphylococcus sp. OJ82]
 gi|392510011|emb|CCI60993.1| GTP pyrophosphokinase [Staphylococcus equorum subsp. equorum Mu2]
 gi|402763873|gb|EJX17964.1| GTP pyrophosphokinase [Staphylococcus sp. OJ82]
          Length = 729

 Score =  328 bits (840), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 191/498 (38%), Positives = 289/498 (58%), Gaps = 49/498 (9%)

Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
           E L    SYLS  + E V ++  +A+EAH+GQ R++G P+I+HP++VA IL E+ LD  +
Sbjct: 11  EVLSKAKSYLSKEDYEYVLKSYHIAYEAHEGQFRKNGLPYIMHPIQVAGILTEMHLDGPT 70

Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
           I AG LHD +EDT   TF+ ++  F   +  IVEG TK+ K+ K + K E       +A+
Sbjct: 71  IVAGFLHDVIEDT-PYTFDDVQGMFNEEIAVIVEGVTKLKKV-KYRSKEEQ------QAE 122

Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
           + R++F+A+ ++VRVI+VKLADRLHNMRT+  MP  KQ  I+ ETL+++APLA  LG+  
Sbjct: 123 NHRKLFIAIAKDVRVILVKLADRLHNMRTIKPMPREKQIRISKETLEIYAPLAHRLGINT 182

Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
           IK ELE+ +  Y ++  Y     R+ +L K+   E E+  +  + +I+ D  +  M +  
Sbjct: 183 IKWELEDTALRYIDSVQYF----RIVNLMKKKRSEREDYIQNAINRIQAD--MSSMNIVG 236

Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
           EI    K  YSIY+ ++K +   +++  +  +RII+            +    CY VLGL
Sbjct: 237 EINGRPKHIYSIYRKMVKQKKQFDQIFDLLAVRIIV------------NSINDCYAVLGL 284

Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
           VH +W P+P   KDYIA PK N YQSLHTT++     +   LE+QIRT EM  IAE G+A
Sbjct: 285 VHTLWKPMPGRFKDYIAMPKQNMYQSLHTTVVG---PNGDPLEIQIRTSEMHEIAEHGVA 341

Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
           AH++ +                  GK V     N   +++W   I+E+ E       + E
Sbjct: 342 AHWAYK-----------------EGKKVTEKAQNFNKKLNW---IKEFAETDNTTSDAEE 381

Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
           F++T+  DL   +V+ FTP  ++  LP GA  +D+AY +H+E+GNKM+ +KVNG +    
Sbjct: 382 FMETLKFDLQSDKVYAFTPESDVVELPYGAVPIDFAYAVHSEVGNKMIGSKVNGKIEPID 441

Query: 612 HVLANAEVVEIITYNVSF 629
           +VL   ++VEI T   S+
Sbjct: 442 YVLQTGDIVEIRTSKHSY 459


>gi|347520664|ref|YP_004778235.1| GTP pyrophosphokinase [Lactococcus garvieae ATCC 49156]
 gi|385832027|ref|YP_005869802.1| GTP pyrophosphokinase [Lactococcus garvieae Lg2]
 gi|343179232|dbj|BAK57571.1| GTP pyrophosphokinase [Lactococcus garvieae ATCC 49156]
 gi|343181180|dbj|BAK59518.1| GTP pyrophosphokinase [Lactococcus garvieae Lg2]
          Length = 741

 Score =  328 bits (840), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 186/491 (37%), Positives = 288/491 (58%), Gaps = 49/491 (9%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           +Y++  ++ LVR+AL  A  AH  Q R SGEP+IIHP++VA IL +L+LD  +++AG LH
Sbjct: 18  AYMNEKDILLVRKALQCASIAHAEQYRASGEPYIIHPIQVAGILAKLQLDAATVSAGFLH 77

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDTN +  + +E  FG  +  IV+G   V+KLGK++ K+    +    A++ R+M +
Sbjct: 78  DVVEDTNFIQSDLVEL-FGEEIANIVDG---VTKLGKVEYKSHEEQL----AENHRKMLM 129

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM++++RVI+VKLADRLHNMRTL ++ P KQ  I++ET+ ++APLA  LG+  IK ELE+
Sbjct: 130 AMSKDIRVILVKLADRLHNMRTLKNLRPDKQKRISSETMAIYAPLAHRLGIGSIKWELED 189

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
           LSF Y N  ++ +++  + +     E  +EE  + L ++++D Q      V  EI    K
Sbjct: 190 LSFRYLNETEFYRIRGLMNEKRAARENLVEEVIEKLNERMKDAQ------VDAEIYGRPK 243

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIY+ +   +   +E+  +  +R       C     L +     Y  LG +H +W P
Sbjct: 244 HIYSIYRKMHDKKKRFDEIYDLIAIR-------C-----LTNSTSDVYTTLGYIHDLWKP 291

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PK NGYQS+HTT    +Y     +E QIRT EM  IAE G+AAH++ + 
Sbjct: 292 MPGRFKDYIANPKANGYQSVHTT----VYGPKGPMEFQIRTHEMHQIAEYGVAAHWAYK- 346

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                           +G+   ++   I+  ++W+N + E QE+     ++ EFV  +  
Sbjct: 347 ----------------QGRKSKVDVHEISETLNWINELVELQEQ--SGDSAEEFVKAVQE 388

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           D+LG +++VFTP G ++ LP G+  +D+AY IHT++G+    AK+N  +    +VL   +
Sbjct: 389 DILGDKIYVFTPTGAVQELPAGSGPIDFAYAIHTQVGDHATGAKINERMQPLNYVLKTGD 448

Query: 619 VVEIITYNVSF 629
            VEIIT   SF
Sbjct: 449 KVEIITSKTSF 459


>gi|422758190|ref|ZP_16811952.1| GTP pyrophosphokinase / guanosine-3',5'-bis(diphosphate)
           3'-pyrophosphohydrolase [Streptococcus dysgalactiae
           subsp. dysgalactiae ATCC 27957]
 gi|322411025|gb|EFY01933.1| GTP pyrophosphokinase / guanosine-3',5'-bis(diphosphate)
           3'-pyrophosphohydrolase [Streptococcus dysgalactiae
           subsp. dysgalactiae ATCC 27957]
          Length = 739

 Score =  328 bits (840), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 187/492 (38%), Positives = 290/492 (58%), Gaps = 51/492 (10%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++  ++  V++AL  A  AH  Q R+SGEP+I+HP++VA IL +L LD  ++A G LHD
Sbjct: 19  YMNRADVAFVKKALDYATAAHFYQVRKSGEPYIVHPIQVAGILADLHLDAVTVACGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            VEDT++ T + IE +FG  VR IV+G   V+KLGK++ K+    +    A++ R+M +A
Sbjct: 79  VVEDTDI-TLDNIEFDFGKDVRDIVDG---VTKLGKVEYKSHEEQL----AENHRKMLMA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M++++RVI+VKL+DRLHNMRTL H+   KQ  I+ ET++++APLA  LG+ +IK ELE+L
Sbjct: 131 MSKDIRVILVKLSDRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELEDL 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEE-ANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
           SF Y N  ++ K+   + +  +E E  +++   KI     E   F D       +    K
Sbjct: 191 SFRYLNETEFYKISHMMKEKRREREALVDDIVTKIKSYTTEQGLFGD-------VYGRPK 243

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YS+Y+ +   +   +++  +  +R +++             Q   Y ++G +H +W P
Sbjct: 244 HIYSVYRKMRDKKKRFDQIFDLIAIRCVME------------TQSDVYAMVGYIHELWRP 291

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PK NGYQS+HTT    +Y     +E+QIRT+EM  +AE G+AAH++   
Sbjct: 292 MPGRFKDYIAAPKANGYQSIHTT----VYGPKGPIEIQIRTKEMHQVAEYGVAAHWA--- 344

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
           +  GL           RGK   +N A   + ++W+  + E Q+    N  + +FVD++  
Sbjct: 345 YKKGL-----------RGK---VNQAEQKVGMNWIKELVELQD--ASNGDAVDFVDSVKE 388

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           D+   R++VFTP G ++ LPK +  +D+AY IHTE+G K   AKVNG +V  T  L   +
Sbjct: 389 DIFSERIYVFTPTGAVQELPKDSGPIDFAYAIHTEVGEKATGAKVNGRMVPLTAKLKTGD 448

Query: 619 VVEIITYNVSFS 630
           VVEI+T   SF 
Sbjct: 449 VVEIVTNPNSFG 460


>gi|307705368|ref|ZP_07642229.1| GTP pyrophosphokinase [Streptococcus mitis SK597]
 gi|307621073|gb|EFO00149.1| GTP pyrophosphokinase [Streptococcus mitis SK597]
          Length = 740

 Score =  328 bits (840), Expect = 8e-87,   Method: Compositional matrix adjust.
 Identities = 187/494 (37%), Positives = 289/494 (58%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YL+  ++  V +AL+ A + H GQ R+SGEP+IIHP++VA IL +L+LD  ++A G 
Sbjct: 16  TKEYLTEEDVHFVHKALVYAVDCHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT+  T + +E EFG  VR IV+G   V+KLGK+K K+    +    A++ R+M
Sbjct: 76  LHDVVEDTDA-TLDDLEREFGPDVRVIVDG---VTKLGKVKYKSHEEQL----AENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM+E++RVI+VKL+DRLHNMRTL H+   KQ  I+ ET++++APLA  LG+  +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISKETMEIYAPLAHRLGISSVKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y N  ++ K+   + +  +E E  ++E    ++ K+E  ++     ++ +I   
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLE--EYTTDHHLRGKIYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSI++ +   R    E+  +  +R I+              Q   Y +LG VH +W
Sbjct: 242 PKHIYSIFRKMQDKRKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHELW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA  K NGYQS+HTT    +Y     +E QIRT+ M  +AE G+AAH++ 
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKAMHEVAEYGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  + G V                 N+   A+ ++W+  + E Q++      ++EFVD++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDSV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             + L   ++VFTP G +++LPK +  +D+AY IHT++G K   AKVNG +V  T  L  
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445

Query: 617 AEVVEIITYNVSFS 630
            + VEI+T   SF 
Sbjct: 446 GDQVEIVTNPNSFG 459


>gi|157150146|ref|YP_001451091.1| GTP diphosphokinase [Streptococcus gordonii str. Challis substr.
           CH1]
 gi|157074940|gb|ABV09623.1| GTP diphosphokinase [Streptococcus gordonii str. Challis substr.
           CH1]
          Length = 738

 Score =  328 bits (840), Expect = 8e-87,   Method: Compositional matrix adjust.
 Identities = 188/494 (38%), Positives = 291/494 (58%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YL+  ++  V++AL+ A + H GQ R+SGEP+I+HP++VA IL +L+LD  ++A G 
Sbjct: 16  TRKYLAAEDVAFVQKALVYAVDCHSGQFRKSGEPYIVHPIQVAGILAKLKLDAVTVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT+    + +E EFG  VR IV+G   V+KLGK+K K+    +    A++ R+M
Sbjct: 76  LHDVVEDTDA-GLDDLEREFGPDVRTIVDG---VTKLGKVKYKSHEEQL----AENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM+E++RVI+VKLADRLHNMRTL H+   KQ  I+ ET++++APLA  LG+  +K EL
Sbjct: 128 LMAMSEDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISSVKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y N  ++ K+   + +  +E E  +EE    ++ KIE   +     +  +I   
Sbjct: 188 EDLSFRYLNEVEFYKISHMMKEKRREREALVEE----VVSKIE--TYAGERHLHGKIYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSIY+ +   +   +E+  +  +R I++           +P  + Y +LG +H +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFDEIYDLIAIRCILE-----------TPSDV-YAMLGYIHELW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA  K NGYQS+HTT    +Y     +E QIRT+EM  +AE G+AAH++ 
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  + G V                 ++   A+ ++W+  + E Q E   +  ++EFVD++
Sbjct: 346 KKGIKGKV-----------------DSKESAIGMNWIQELMELQAE---SGDAKEFVDSV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             + L   ++VFTP G ++ LPK +  +D+AY IHT++G +   AKVNG +V  T  L  
Sbjct: 386 KENYLAEEIYVFTPDGSVRALPKDSGPIDFAYEIHTKVGERATGAKVNGRMVPLTTKLKT 445

Query: 617 AEVVEIITYNVSFS 630
            + VEIIT   SF 
Sbjct: 446 GDQVEIITSANSFG 459


>gi|89093832|ref|ZP_01166778.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
           [Neptuniibacter caesariensis]
 gi|89081962|gb|EAR61188.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
           [Oceanospirillum sp. MED92]
          Length = 713

 Score =  328 bits (840), Expect = 8e-87,   Method: Compositional matrix adjust.
 Identities = 187/486 (38%), Positives = 267/486 (54%), Gaps = 45/486 (9%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
            YL P ++  VRR+   A +AHDGQKR+SGEP++ HP+  A IL EL +D +S+ A +LH
Sbjct: 13  DYLDPQQIRQVRRSYFYAEQAHDGQKRKSGEPYVTHPLAAANILAELRMDHQSLMAAMLH 72

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D +EDT V T+E IE +FG  V  IV+G +K++ L       E  +  + +A++ ++M L
Sbjct: 73  DVIEDTEV-TYEGIESQFGKVVADIVDGVSKLTHL-------EFETKAEAQANNFQKMVL 124

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM E++RVI+VKLADRLHNMRTL  MPPHKQ  IA ETL ++AP+A  LGM  ++ ELE+
Sbjct: 125 AMAEDIRVILVKLADRLHNMRTLGAMPPHKQRRIARETLDIYAPIAARLGMRDVQVELED 184

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
           L+F          ++R V     + +  +    + + K+++ +     +T +       K
Sbjct: 185 LAFQAHYPMRSKHIRRAVVQARGQRKDVISTIQETIEKRLQKEGLSGQVTGRE------K 238

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIY  +   R S +E+  +   RI+                  CY  LG VH ++ P
Sbjct: 239 HLYSIYSKMRAQRKSFSEIMDVFAFRIV------------TDSVDDCYRTLGAVHNLYKP 286

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +    KDYIA PK NGYQSLHT L          +EVQIRT EMD +A +GIA H     
Sbjct: 287 VHGRFKDYIAIPKANGYQSLHTDLFG---ARDITIEVQIRTHEMDAVASQGIAEH----- 338

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                  H + +          L N   A +  W+  + E  +   GN  S EF+D++  
Sbjct: 339 ------SHYKHDEDDIDASESALGNYKRARK--WVQGLLEMHQR-AGN--SMEFIDSVKT 387

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           DL    V+VFTP G+I  LP GAT VD+AY +HT++GN  V+ ++N  L   +  L N +
Sbjct: 388 DLFPDEVYVFTPLGKIMELPSGATAVDFAYAVHTDVGNSCVSCRINRRLAPLSQPLENGQ 447

Query: 619 VVEIIT 624
            VEIIT
Sbjct: 448 TVEIIT 453


>gi|403252468|ref|ZP_10918778.1| (p)ppGpp synthetase [Thermotoga sp. EMP]
 gi|402812481|gb|EJX26960.1| (p)ppGpp synthetase [Thermotoga sp. EMP]
          Length = 733

 Score =  327 bits (839), Expect = 8e-87,   Method: Compositional matrix adjust.
 Identities = 197/485 (40%), Positives = 279/485 (57%), Gaps = 52/485 (10%)

Query: 141 LSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDT 200
            +  E +L+ +A   A   H+GQKR SGEPFI HPVEV +IL  L +D  ++ A LLHD 
Sbjct: 45  FTREEKKLLIKAYEFARIVHEGQKRFSGEPFITHPVEVTKILAGLGVDVTTLVAALLHDV 104

Query: 201 VEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAM 260
           VED   V+ ++I++EFG  V RIV+G TKVS +     ++++      K + +++MF AM
Sbjct: 105 VEDGENVSLDQIKKEFGPEVARIVDGVTKVSNINAPIGRDQDSR---KKIETIQKMFFAM 161

Query: 261 TEEVRVIIVKLADRLHNMRTLSHMPPH-KQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
            E++RVI VKLADRLHNMRT+ ++    K+   A ETL+++APLA  LG+Y IKSELE+L
Sbjct: 162 AEDMRVIFVKLADRLHNMRTIHYVQDQEKKRYKAYETLEIYAPLAHKLGIYSIKSELEDL 221

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           +F     E+Y K+K  VA+  KE EK   E   +L   +E+ +      +K  +    K 
Sbjct: 222 AFKVLYPEEYYKIKELVAEKRKEREKRTNEYISLLKSALEEHK------IKAIVEGRYKH 275

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSI++ + +      E+  +  LR+I+K                CY VLG+VH IW P+
Sbjct: 276 YYSIWRKMREKGKKFEEIYDLIALRVIVKDVTT------------CYTVLGIVHNIWKPL 323

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK NGY+SLHTT+I    E    LE+QIR EEM   AE G+ AH+     
Sbjct: 324 PGRFKDYIAAPKSNGYRSLHTTVITGYGEP---LEIQIRDEEMHREAEYGLIAHW----- 375

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
               +   RP+ ++ +                W+  + +W++E     T  EF D I ++
Sbjct: 376 ----IYKERPDVKTAK---------------EWIERLLDWRKELAQGFT--EFED-IKKE 413

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           L    VFVFTP+G+I +LPKG+T +D+AY IHTEIG+    AKVNG +V   + L N +V
Sbjct: 414 LQMDEVFVFTPKGDILHLPKGSTPIDFAYAIHTEIGHHYSGAKVNGKIVPIDYQLKNGDV 473

Query: 620 VEIIT 624
           VEII 
Sbjct: 474 VEIIV 478


>gi|408400921|ref|YP_006858884.1| GTP pyrophosphokinase [Streptococcus dysgalactiae subsp.
           equisimilis RE378]
 gi|407967149|dbj|BAM60387.1| GTP pyrophosphokinase [Streptococcus dysgalactiae subsp.
           equisimilis RE378]
          Length = 739

 Score =  327 bits (839), Expect = 8e-87,   Method: Compositional matrix adjust.
 Identities = 185/492 (37%), Positives = 289/492 (58%), Gaps = 51/492 (10%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++  +   V++AL  A  AH  Q R+SGEP+I+HP++VA IL +L LD  ++A G LHD
Sbjct: 19  YMNETDAAFVKKALDYATAAHFYQVRKSGEPYIVHPIQVAGILADLHLDAVTVACGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            VEDT++ T + IE +FG  VR IV+G   V+KLGK++ K+    +    A++ R+M +A
Sbjct: 79  VVEDTDI-TLDNIEFDFGKDVRDIVDG---VTKLGKVEYKSHEEQL----AENHRKMLMA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M++++RVI+VKLADRLHNMRTL H+   KQ  I+ ET++++APLA  LG+ +IK ELE+L
Sbjct: 131 MSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELEDL 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEE-ANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
           +F Y N  ++ K+   + +  +E E  +++   KI     E   F D       +    K
Sbjct: 191 AFRYLNETEFYKISHMMNEKRREREALVDDIVTKIKSYTTEQGLFGD-------VYGRPK 243

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIY+ +   +   +++  +  +R +++             Q   Y ++G +H +W P
Sbjct: 244 HIYSIYRKMRDKKKRFDQIFDLIAIRCVME------------TQSDVYAMVGYIHELWRP 291

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PK NGYQS+HTT    +Y     +E+QIRT+EM  +AE G+AAH++ + 
Sbjct: 292 MPGRFKDYIAAPKANGYQSIHTT----VYGPKGPIEIQIRTKEMHQVAEYGVAAHWAYK- 346

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                        +  RGK   +N A   + ++W+  + E Q+    N  + +FVD++  
Sbjct: 347 -------------KGVRGK---VNQAEQKVGMNWIKELVELQD--ASNGDAVDFVDSVKE 388

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           D+   R++VFTP G ++ LPK +  +D+AY IHT++G K + AKVNG +V  T  L   +
Sbjct: 389 DIFSERIYVFTPTGAVQELPKDSGPIDFAYAIHTQVGEKAIGAKVNGRMVPLTAKLKTGD 448

Query: 619 VVEIITYNVSFS 630
           VVEI+T   SF 
Sbjct: 449 VVEIVTNPNSFG 460


>gi|114045839|ref|YP_736389.1| bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis
           pyrophosphate 3'-pyrophosphohydrolase [Shewanella sp.
           MR-7]
 gi|113887281|gb|ABI41332.1| (p)ppGpp synthetase I, SpoT/RelA [Shewanella sp. MR-7]
          Length = 700

 Score =  327 bits (839), Expect = 8e-87,   Method: Compositional matrix adjust.
 Identities = 200/503 (39%), Positives = 289/503 (57%), Gaps = 65/503 (12%)

Query: 130 LWEDLRPTIS-YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
           L+E L+ + S YL P ++EL+++A  +A +AH+GQ R SGEP+I HPV VARIL E+ LD
Sbjct: 3   LFEGLKESASGYLEPEQVELLKQAYQVARDAHEGQMRTSGEPYITHPVAVARILAEMRLD 62

Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
            E++ A LLHDT+EDT  VT E + E+FG  V  +VEG   VSKL KLK +++    ++ 
Sbjct: 63  HETLMAALLHDTIEDT-YVTKEDLAEQFGEAVAELVEG---VSKLDKLKFRDK----KEA 114

Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
           +A++ R+M +AMT+++RVI++KLADR HNMRTL  + P K+  IA ETL+++AP+A  LG
Sbjct: 115 QAENFRKMMMAMTQDIRVILIKLADRTHNMRTLGALRPDKRRRIARETLEIYAPIANRLG 174

Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQF--LDL 366
           ++ IK+ELE+L F     + Y  ++ RV    KE  K      K L++ IE      L+ 
Sbjct: 175 IHNIKTELEDLGF-----QAYYPMRYRV---LKEVVKAARGNRKELIQGIEAAVLTRLND 226

Query: 367 MTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICY 426
             +K +++   K  YSIY  +        EV  I   R+I+                 CY
Sbjct: 227 AGIKGKVKGREKNLYSIYNKMQSKELQFQEVMDIYAFRVIVDSIDT------------CY 274

Query: 427 HVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTL-----IPFLYESMFRLEVQIRTEE 481
            VLG +HG++ P P   KDYIA PK NGYQSLHT+L     +P        +E+QIRTE+
Sbjct: 275 RVLGAMHGLYKPRPGRFKDYIAIPKANGYQSLHTSLFGPHGVP--------VEIQIRTED 326

Query: 482 MDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQE 541
           MD +A++G+AAH+            A   G   +G T  +          W+ ++ E Q+
Sbjct: 327 MDQMADKGVAAHW------------AYKGGADGQGTTTQVRAR------KWMQSLLELQQ 368

Query: 542 EFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAA 601
                 TS EFV+ +  +L    ++VFTP G I  LP  AT VD+AY +HT++GN  V A
Sbjct: 369 ---SASTSFEFVENVKTELFPEEIYVFTPEGRILELPVNATAVDFAYEVHTDVGNTCVGA 425

Query: 602 KVNGNLVSPTHVLANAEVVEIIT 624
           +VN      +  L + + VEIIT
Sbjct: 426 RVNRQAYPLSQPLISGQTVEIIT 448


>gi|307127856|ref|YP_003879887.1| GTP pyrophosphokinase [Streptococcus pneumoniae 670-6B]
 gi|306484918|gb|ADM91787.1| GTP pyrophosphokinase [Streptococcus pneumoniae 670-6B]
          Length = 740

 Score =  327 bits (839), Expect = 8e-87,   Method: Compositional matrix adjust.
 Identities = 188/494 (38%), Positives = 289/494 (58%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YL+  ++  V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD  ++A G 
Sbjct: 16  TKEYLTEEDVHFVHKALVYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT+  T + +E EFG  VR IV+G   V+KLGK++ K    S+++  A++ R+M
Sbjct: 76  LHDVVEDTDA-TLDDLEREFGPDVRVIVDG---VTKLGKVEYK----SIEEQLAENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM+E++RVI+VKL+DRLHNMRTL H+   KQ  I+ ET++++APLA  LG+  +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISKETMEIYAPLAHRLGISSVKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y N  ++ K+   + +  +E E  ++E    ++ K+E  ++     +K +I   
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLE--EYTTERHLKGKIYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSI++ +   R    E+  +  +R I+              Q   Y +LG VH  W
Sbjct: 242 PKHIYSIFRKMQDKRKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHEFW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA  K NGY S+HTT    +Y     +E QIRT+EM  +AE G+AAH++ 
Sbjct: 290 KPMPGRFKDYIANRKANGYXSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  + G V                 N+   A+ ++W+  + E Q++      ++EFVD++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDSV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             + L   ++VFTP G +++LPK +  +D+AY IHT++G K   AKVNG +V  T  L  
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445

Query: 617 AEVVEIITYNVSFS 630
            + VEI+    SF 
Sbjct: 446 GDQVEIVANPNSFG 459


>gi|410493960|ref|YP_006903806.1| GTP pyrophosphokinase [Streptococcus dysgalactiae subsp.
           equisimilis AC-2713]
 gi|410439120|emb|CCI61748.1| K00951 GTP pyrophosphokinase [Streptococcus dysgalactiae subsp.
           equisimilis AC-2713]
          Length = 739

 Score =  327 bits (839), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 185/492 (37%), Positives = 289/492 (58%), Gaps = 51/492 (10%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++  +   V++AL  A  AH  Q R+SGEP+I+HP++VA IL +L LD  ++A G LHD
Sbjct: 19  YMNETDAAFVKKALDYATAAHFYQVRKSGEPYIVHPIQVAGILADLHLDAVTVACGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            VEDT++ T + IE +FG  VR IV+G   V+KLGK++ K+    +    A++ R+M +A
Sbjct: 79  VVEDTDI-TLDNIEFDFGKDVRDIVDG---VTKLGKVEYKSHEEQL----AENHRKMLMA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M++++RVI+VKLADRLHNMRTL H+   KQ  I+ ET++++APLA  LG+ +IK ELE+L
Sbjct: 131 MSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELEDL 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEE-ANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
           +F Y N  ++ K+   + +  +E E  +++   KI     E   F D       +    K
Sbjct: 191 AFRYLNETEFYKISHMMNEKRREREALVDDIVTKIKSYTTEQGLFGD-------VYGRPK 243

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIY+ +   +   +++  +  +R +++             Q   Y ++G +H +W P
Sbjct: 244 HIYSIYRKMRDKKKRFDQIFDLIAIRCVME------------TQSDVYAMVGYIHELWRP 291

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PK NGYQS+HTT    +Y     +E+QIRT+EM  +AE G+AAH++ + 
Sbjct: 292 MPGRFKDYIAAPKANGYQSIHTT----VYGPKGPIEIQIRTKEMHQVAEYGVAAHWAYK- 346

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                        +  RGK   +N A   + ++W+  + E Q+    N  + +FVD++  
Sbjct: 347 -------------KGVRGK---VNQAEQKVGMNWIKELVELQD--ASNGDAVDFVDSVKE 388

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           D+   R++VFTP G ++ LPK +  +D+AY IHT++G K + AKVNG +V  T  L   +
Sbjct: 389 DIFSERIYVFTPTGAVQELPKDSGPIDFAYAIHTQVGEKAIGAKVNGRMVPLTAKLKTGD 448

Query: 619 VVEIITYNVSFS 630
           VVEI+T   SF 
Sbjct: 449 VVEIVTNPNSFG 460


>gi|251781660|ref|YP_002995962.1| GTP pyrophosphokinase [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|242390289|dbj|BAH80748.1| GTP pyrophosphokinase [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
          Length = 739

 Score =  327 bits (839), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 185/492 (37%), Positives = 289/492 (58%), Gaps = 51/492 (10%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++  +   V++AL  A  AH  Q R+SGEP+I+HP++VA IL +L LD  ++A G LHD
Sbjct: 19  YMNETDAAFVKKALDYATAAHFYQVRKSGEPYIVHPIQVAGILADLHLDAVTVACGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            VEDT++ T + IE +FG  VR IV+G   V+KLGK++ K+    +    A++ R+M +A
Sbjct: 79  VVEDTDI-TLDNIEFDFGKDVRDIVDG---VTKLGKVEYKSHEEQL----AENHRKMLMA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M++++RVI+VKLADRLHNMRTL H+   KQ  I+ ET++++APLA  LG+ +IK ELE+L
Sbjct: 131 MSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELEDL 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEE-ANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
           +F Y N  ++ K+   + +  +E E  +++   KI     E   F D       +    K
Sbjct: 191 AFRYLNETEFYKISHMMNEKRREREALVDDIVTKIKSYTTEQGLFGD-------VYGRPK 243

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIY+ +   +   +++  +  +R +++             Q   Y ++G +H +W P
Sbjct: 244 HIYSIYRKMRDKKKRFDQIFDLIAIRCVME------------TQSDVYAMVGYIHELWRP 291

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PK NGYQS+HTT    +Y     +E+QIRT+EM  +AE G+AAH++ + 
Sbjct: 292 MPGRFKDYIAAPKANGYQSIHTT----VYGPKGPIEIQIRTKEMHQVAEYGVAAHWAYK- 346

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                        +  RGK   +N A   + ++W+  + E Q+    N  + +FVD++  
Sbjct: 347 -------------KGVRGK---VNQAEQKVGMNWIKELVELQD--ASNGDAVDFVDSVKE 388

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           D+   R++VFTP G ++ LPK +  +D+AY IHT++G K + AKVNG +V  T  L   +
Sbjct: 389 DIFSERIYVFTPTGAVQELPKDSGPIDFAYAIHTQVGEKAIGAKVNGRMVPLTAKLKTGD 448

Query: 619 VVEIITYNVSFS 630
           VVEI+T   SF 
Sbjct: 449 VVEIVTNPNSFG 460


>gi|2498843|sp|Q54089.1|RELA_STREQ RecName: Full=Bifunctional (p)ppGpp synthase/hydrolase RelA;
           Includes: RecName: Full=GTP pyrophosphokinase; AltName:
           Full=(p)ppGpp synthase; AltName: Full=ATP:GTP
           3'-pyrophosphotransferase; AltName: Full=Stringent
           response-like protein; AltName: Full=ppGpp synthase I;
           Includes: RecName: Full=Guanosine-3',5'-bis(diphosphate)
           3'-pyrophosphohydrolase; AltName: Full=Penta-phosphate
           guanosine-3'-pyrophosphohydrolase; Short=(ppGpp)ase
 gi|407881|emb|CAA51353.1| stringent response-like protein [Streptococcus dysgalactiae subsp.
           equisimilis]
 gi|742310|prf||2009358E stringent response-like protein
          Length = 739

 Score =  327 bits (839), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 185/492 (37%), Positives = 289/492 (58%), Gaps = 51/492 (10%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++  +   V++AL  A  AH  Q R+SGEP+I+HP++VA IL +L LD  ++A G LHD
Sbjct: 19  YMNETDAAFVKKALDYATAAHFYQVRKSGEPYIVHPIQVAGILADLHLDAVTVACGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            VEDT++ T + IE +FG  VR IV+G   V+KLGK++ K+    +    A++ R+M +A
Sbjct: 79  VVEDTDI-TLDNIEFDFGKDVRDIVDG---VTKLGKVEYKSHEEQL----AENHRKMLMA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M++++RVI+VKLADRLHNMRTL H+   KQ  I+ ET++++APLA  LG+ +IK ELE+L
Sbjct: 131 MSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELEDL 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEE-ANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
           +F Y N  ++ K+   + +  +E E  +++   KI     E   F D       +    K
Sbjct: 191 AFRYLNETEFYKISHMMNEKRREREALVDDIVTKIKSYTTEQGLFGD-------VYGRPK 243

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIY+ +   +   +++  +  +R +++             Q   Y ++G +H +W P
Sbjct: 244 HIYSIYRKMRDKKKRFDQIFDLIAIRCVME------------TQSDVYAMVGYIHELWRP 291

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PK NGYQS+HTT    +Y     +E+QIRT+EM  +AE G+AAH++ + 
Sbjct: 292 MPGRFKDYIAAPKANGYQSIHTT----VYGPKGPIEIQIRTKEMHQVAEYGVAAHWAYK- 346

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                        +  RGK   +N A   + ++W+  + E Q+    N  + +FVD++  
Sbjct: 347 -------------KGVRGK---VNQAEQKVGMNWIKELVELQD--ASNGDAVDFVDSVKE 388

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           D+   R++VFTP G ++ LPK +  +D+AY IHT++G K + AKVNG +V  T  L   +
Sbjct: 389 DIFSERIYVFTPTGAVQELPKDSGPIDFAYAIHTQVGEKAIGAKVNGRMVPLTAKLKTGD 448

Query: 619 VVEIITYNVSFS 630
           VVEI+T   SF 
Sbjct: 449 VVEIVTNPNSFG 460


>gi|392330576|ref|ZP_10275191.1| (p)ppGpp synthetase [Streptococcus canis FSL Z3-227]
 gi|391418255|gb|EIQ81067.1| (p)ppGpp synthetase [Streptococcus canis FSL Z3-227]
          Length = 739

 Score =  327 bits (839), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 184/491 (37%), Positives = 289/491 (58%), Gaps = 49/491 (9%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++  ++  V++AL  A  AH  Q R+SGEP+I+HP++VA IL +L LD  ++A G LHD
Sbjct: 19  YMNDTDVAFVKKALDYATAAHFYQVRKSGEPYIVHPIQVAGILADLHLDAVTVACGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            VEDT+  T + IE +FG   R IV+G   V+KLGK++ K+    +    A++ R+M +A
Sbjct: 79  VVEDTDT-TLDNIEADFGKDARDIVDG---VTKLGKVEYKSHEEQL----AENHRKMLMA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M++++RVI+VKLADRLHNMRTL H+   KQ  I+ ET++++APLA  LG+ +IK ELE+L
Sbjct: 131 MSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELEDL 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           SF Y N  ++ K    ++ + KE  +E E     ++ KI+   +     +  ++    K 
Sbjct: 191 SFRYLNETEFYK----ISHMMKEKRREREALVDDIVTKIK--SYTTEQGLFGDVYGRPKH 244

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIY+ +   +   +++  +  +R +++             Q   Y ++G +H +W P+
Sbjct: 245 IYSIYRKMRDKKKRFDQIFDLIAIRCVME------------TQSDVYAMVGYIHELWRPM 292

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK NGYQS+HTT    +Y     +E+QIRT+EM  +AE G+AAH++ +  
Sbjct: 293 PGRFKDYIAAPKANGYQSIHTT----VYGPKGPIEIQIRTKEMHQVAEYGVAAHWAYK-- 346

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
                       +  RGK   +N A   + ++W+  + E Q+    N  + +FVD++  D
Sbjct: 347 ------------KGIRGK---VNQAEQKVGMNWIKELVELQD--ASNGDAMDFVDSVKED 389

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           +   R++VFTP G ++ LPK +  +D+AY IHT++G K   AKVNG +V  T  L   +V
Sbjct: 390 IFSERIYVFTPTGAVQELPKDSGPIDFAYAIHTQVGEKATGAKVNGRMVPLTAKLKTGDV 449

Query: 620 VEIITYNVSFS 630
           VEI+T   SF 
Sbjct: 450 VEIVTNPNSFG 460


>gi|303232508|ref|ZP_07319195.1| putative GTP diphosphokinase [Atopobium vaginae PB189-T1-4]
 gi|302481392|gb|EFL44465.1| putative GTP diphosphokinase [Atopobium vaginae PB189-T1-4]
          Length = 829

 Score =  327 bits (839), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 194/496 (39%), Positives = 290/496 (58%), Gaps = 44/496 (8%)

Query: 131 WEDLRPTIS-YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILG-ELELD 188
           W  LR   + YL    L  +  A   A  AH  Q+R+SGEP+I HPVEVA IL  +L +D
Sbjct: 75  WRALRSICAHYLGSTALARIDEAYDFASAAHKDQRRQSGEPYINHPVEVAFILAKDLHMD 134

Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
            +SI + +LHDTVEDT+  T + IEE FG TVR +V+G TK++ +       E  S+ + 
Sbjct: 135 EDSICSAILHDTVEDTSA-TLDDIEERFGYTVRELVDGVTKLTSI-------EVSSMDEK 186

Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
           +A +LR+MFLAM++++RVII+KLADRLHNMRTL+ +P ++++  A ET  V+APLA  LG
Sbjct: 187 QALNLRKMFLAMSKDIRVIIIKLADRLHNMRTLAALPENRRTFKAKETRDVYAPLADRLG 246

Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
           +  IK ELE+L+F+Y + ++Y ++ R V     + E+ +     IL     +D+   +  
Sbjct: 247 ISSIKWELEDLAFLYLDHDEYQRIARMVQQSRAQREQNITSTIHIL-----EDELARVGM 301

Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
               I+   K  +SIY+ +++   + N++  +  +R++ K      VG        CY  
Sbjct: 302 QGVSIQGRPKHLWSIYQKMIRKDKNFNDIYDLIAIRVLTKT-----VGD-------CYSA 349

Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAER 488
           LG VH IW P+P   KDYIA PKPNGY+SLHTT+I         +E+QIRT EM   AE 
Sbjct: 350 LGSVHTIWHPLPGRFKDYIAMPKPNGYRSLHTTVIGI---DARPIEIQIRTYEMHSQAEY 406

Query: 489 GIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMT 548
           GIAAH+  +               S +GK +  +   I  +I+W+    +W  +      
Sbjct: 407 GIAAHWLYK------------KSGSSQGK-MSRDEKEIDSQINWIRKSLDWTVDDD-LDD 452

Query: 549 SREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLV 608
             EF++ +  DL    +FVFTP+GE+ NL + AT +D+AY +HTE+GN  V AK+NG++V
Sbjct: 453 PHEFMNNLRLDLFEDEIFVFTPKGEVINLRRDATPLDFAYAVHTEVGNHCVGAKINGSVV 512

Query: 609 SPTHVLANAEVVEIIT 624
             T+ L N + +E++T
Sbjct: 513 PLTYRLQNGDRIEVLT 528


>gi|406980368|gb|EKE01979.1| hypothetical protein ACD_21C00011G0004 [uncultured bacterium]
          Length = 705

 Score =  327 bits (839), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 191/495 (38%), Positives = 278/495 (56%), Gaps = 50/495 (10%)

Query: 130 LWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDW 189
           L++ L   +SYL  +++E + +A ++A EAH GQKR +GE FI HP  VA IL ++ +D 
Sbjct: 3   LYKQLHKKLSYLETDQIEQIHQAYLIASEAHLGQKRDTGENFITHPTAVACILADMHMDP 62

Query: 190 ESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVK 249
           +SI A LLHD +EDT   T E+I  +FG T+  +V+G TK++K+ +   K EN+      
Sbjct: 63  QSIIAALLHDVIEDTPT-TKEKIVSQFGQTIADLVDGLTKLTKI-EASNKAENY------ 114

Query: 250 ADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGM 309
           A+  R+M LAM++++RVI++KLADRLHNM+T+S + PHK+  IA ETL ++AP+A  LGM
Sbjct: 115 ANSFRKMVLAMSQDIRVILIKLADRLHNMQTISGVMPHKRQRIAKETLDIYAPIANRLGM 174

Query: 310 YQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTV 369
             I  ELENL+F       Y  +K+ +   Y  H++ +    K L     +  F+     
Sbjct: 175 RDICVELENLAFAIIYPRRYRVLKKAIGQSYGSHKEVMATIEKEL-----NQAFIKSSLE 229

Query: 370 KTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVL 429
            T I    K  Y +YK +L    S   +  +   RII+K      VG        CY  L
Sbjct: 230 STTIAGREKHLYGVYKKMLSHHLSFANIMDVYAFRIIVKK-----VGD-------CYRAL 277

Query: 430 GLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERG 489
           G+ H ++ P+P   KDYIA PK NGYQSLHT L   L      +E+QIRT+ MD +A  G
Sbjct: 278 GIAHSLYKPVPGKFKDYIAIPKANGYQSLHTVL---LGPHGIPIEIQIRTQTMDQMANSG 334

Query: 490 IAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTS 549
           IAAH+  +       G  R N    R +              W+N + E Q+      +S
Sbjct: 335 IAAHWLYK------SGDKRANAAHIRAQ-------------QWINNLLEMQQN---TSSS 372

Query: 550 REFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVS 609
            EF++ +  DL    V++FTP+G I  LP+GAT VD+AY +HT+IGN  VAA+++   + 
Sbjct: 373 LEFIENVKIDLFPDEVYLFTPKGNIMELPRGATAVDFAYAVHTDIGNTCVAARIDRKFLP 432

Query: 610 PTHVLANAEVVEIIT 624
            +  L N +V+ IIT
Sbjct: 433 LSTTLLNGQVISIIT 447


>gi|326803463|ref|YP_004321281.1| GTP diphosphokinase [Aerococcus urinae ACS-120-V-Col10a]
 gi|326651531|gb|AEA01714.1| GTP diphosphokinase [Aerococcus urinae ACS-120-V-Col10a]
          Length = 748

 Score =  327 bits (839), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 182/486 (37%), Positives = 289/486 (59%), Gaps = 48/486 (9%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
            Y+  +++ ++++A   A  AH+GQKR+SGEPF IHP +VA IL +L++D +++A G LH
Sbjct: 18  QYMPEDKVAMIKKACAFAERAHEGQKRKSGEPFFIHPTQVAGILADLQMDPDTVATGFLH 77

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT + T + IE  F  T+  +V+G   V+KLGK+K +++   +    A++ +++ L
Sbjct: 78  DVVEDTGI-TLDDIEYFFSKTIATLVDG---VTKLGKVKYRSKEEQL----AENHQKLLL 129

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM  ++RVI+VKLADRLHNMRTL    P KQ SI+ ETL ++APLA  LGM QIK ELE+
Sbjct: 130 AMANDLRVIVVKLADRLHNMRTLKWHRPEKQVSISEETLDIYAPLADRLGMSQIKWELED 189

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
               Y N E Y ++   +    +E E  ++    +L K ++      ++  + +I    K
Sbjct: 190 TCLRYINPEAYYQIVHLMNSKREEREAYIDATIDVLNKYVK-----PIIDGEYDIYGRPK 244

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIYK + + + + +E+  +  +R+++         P       CY VLG+VH  W P
Sbjct: 245 HIYSIYKKMHQQKKTFDEIYDLLAIRVLV---------PSVKD---CYAVLGIVHTSWKP 292

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PK NGYQSLHTT+   L E    +E+QIRT +M  +AE G+AAH++ + 
Sbjct: 293 LPGRFKDYIAMPKANGYQSLHTTV---LGEHGQPVEIQIRTFDMHEVAEYGVAAHWAYK- 348

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                           +G T  +   ++  ++ W + I + Q++   +  + +FV+++  
Sbjct: 349 ----------------KGVTDKVETDDLDKQLEWFHQIEDLQDD---SDDATQFVESVKE 389

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           D+   +V+VFTP+G++  LP GA+ +D+AY IHTE+G+  V AKVNG +V   + L   +
Sbjct: 390 DIFKDKVYVFTPKGDVSELPSGASPLDFAYQIHTEVGHSTVGAKVNGKIVPLNYGLHTGD 449

Query: 619 VVEIIT 624
           +VEI+T
Sbjct: 450 IVEILT 455


>gi|329769877|ref|ZP_08261276.1| hypothetical protein HMPREF0433_01040 [Gemella sanguinis M325]
 gi|328837931|gb|EGF87555.1| hypothetical protein HMPREF0433_01040 [Gemella sanguinis M325]
          Length = 725

 Score =  327 bits (839), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 187/485 (38%), Positives = 288/485 (59%), Gaps = 50/485 (10%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           YL   ++++++ +  LA +AH+GQ R+SGEP+I+HP++VA IL EL+LD+ +I AG LHD
Sbjct: 19  YLPEEQIKIIKESYELAKDAHEGQFRKSGEPYILHPIQVAGILTELKLDYATICAGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            VEDT   T E I E FG  +  IV+G   V+KL K+K +++  S    +A++ R++F++
Sbjct: 79  VVEDTKY-TLEDIRERFGDDIAVIVDG---VTKLDKVKFRSKKQS----QAENHRKLFVS 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           + +++RVI VKLADRLHNMRT+ +M   KQ  IA+ETL+++APLA  LG+  +K ELE+ 
Sbjct: 131 IAKDLRVIFVKLADRLHNMRTMKYMREEKQREIASETLEIYAPLAHRLGISSVKWELEDT 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           S  Y +   Y  +   +       E+ ++EA + +         L    +K ++    K 
Sbjct: 191 SLRYLHPAQYFSIVGMMKQKRSAREESIKEACESIT------SLLGEHNIKAQVNGRPKH 244

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIYK ++K   + +++  +  +R+++       V         CY  LGLV+ +W PI
Sbjct: 245 IYSIYKKMVKQNKTFDQIYDLLAVRVLV-----DSVAD-------CYATLGLVNNLWVPI 292

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P  +KDYIA PKPN YQSLHTT+I    ++   LEVQIRT EM  IAE+GIAAH++ +  
Sbjct: 293 PGRIKDYIAMPKPNMYQSLHTTVIAPDGQT---LEVQIRTYEMHEIAEKGIAAHWAYK-- 347

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
                           GK V  +N N   +++W   I E  E      T+  F++++  D
Sbjct: 348 ---------------EGKKVNKDN-NFYEKLNWFQKIAENDE---TEATAESFMESLKVD 388

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           LL  +++VFTP  +I  LPKG+ +VD+AY IH+E+GNKM+ A VN  + +  + L+  E+
Sbjct: 389 LLSDKIYVFTPNSDIIELPKGSCIVDFAYAIHSEVGNKMIGATVNDKIEAFDYKLSTGEI 448

Query: 620 VEIIT 624
            +I T
Sbjct: 449 CDIRT 453


>gi|385263022|ref|ZP_10041119.1| GTP diphosphokinase [Streptococcus sp. SK643]
 gi|385188997|gb|EIF36467.1| GTP diphosphokinase [Streptococcus sp. SK643]
          Length = 740

 Score =  327 bits (839), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 188/494 (38%), Positives = 290/494 (58%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YLS  ++  V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD  ++A G 
Sbjct: 16  TQKYLSEEDVAFVHKALVYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT+  + + +E  FG  VR IV+G   V+KLGK++ K    S+++  A++ R+M
Sbjct: 76  LHDVVEDTDA-SLDDLERVFGHDVRVIVDG---VTKLGKVEYK----SLEEQLAENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM+E++RVI+VKL+DRLHNMRTL H+   KQ  I+ ET++++APLA  LG+  +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISKETMEIYAPLAHRLGISSVKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y N  ++ K+   + +  +E E  ++E    ++ K+ED  +     +  +I   
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLED--YTSERHLTGKIYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSI++ +   +    E+  +  +R I+              Q   Y +LG VH +W
Sbjct: 242 PKHIYSIFRKMQDKKKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHELW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA  K NGYQS+HTT    +Y     +E QIRT+EM  +AE G+AAH++ 
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  + G V                 N+   A+ ++W+  + E Q++      ++EFVD++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDSV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             + L   ++VFTP G +++LPK +  +D+AY IHT++G K   AKVNG +V  T  L  
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445

Query: 617 AEVVEIITYNVSFS 630
            + VEI+T   SF 
Sbjct: 446 GDQVEIVTNPNSFG 459


>gi|347731510|ref|ZP_08864606.1| relA/SpoT family protein [Desulfovibrio sp. A2]
 gi|347519829|gb|EGY26978.1| relA/SpoT family protein [Desulfovibrio sp. A2]
          Length = 722

 Score =  327 bits (839), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 198/498 (39%), Positives = 291/498 (58%), Gaps = 52/498 (10%)

Query: 129 RLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
           R+ + L    S     +L L+++A + A  AH GQ R SGEP++ HP+ VA  L E+  D
Sbjct: 3   RIQDVLDKVASVNKDADLALIQKAYVYAAAAHAGQTRLSGEPYLSHPLAVAYSLAEMRFD 62

Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
             +IAAGLLHDTVEDT V + E I+  FG  V  +V+G TK+S++          S ++ 
Sbjct: 63  EAAIAAGLLHDTVEDTTV-SIEDIDTLFGEEVADVVDGVTKISQMT-------FESKEEA 114

Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
           +A+++R+M LAM  ++RV+IVKLADRLHNMRTL    PHKQ  IA ET+ ++APLA  LG
Sbjct: 115 QAENIRKMILAMAHDIRVLIVKLADRLHNMRTLDFQKPHKQKLIAQETMDIYAPLANRLG 174

Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
           +++IK ELE+LSF Y   + YA++   +         ++ E++ I        + LD   
Sbjct: 175 LHRIKLELEDLSFRYLKPDVYAQINEWL------DTNQVVESHYIERVITRIKEILDKNE 228

Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
           VK E+R   K  YSIYK +++   ++++++ I   R+I+               + CY V
Sbjct: 229 VKGEVRGRIKHKYSIYKKMVQQDLTLDDMHDIIAFRVIV------------DDLRDCYAV 276

Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAER 488
           LGL+H  W P+    KDYI+ PK NGY+SLHTT+I    E   R+E+QIRTEEM  +AE 
Sbjct: 277 LGLMHAQWKPVHGRFKDYISMPKANGYRSLHTTVIGPEGE---RMEIQIRTEEMHRLAEH 333

Query: 489 GIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMT 548
           G+A+H+   ++  G     R N R                + +WL+ I + Q+       
Sbjct: 334 GVASHW---LYKEG----GRVNPRDLE-------------QFTWLHEILDRQK---METD 370

Query: 549 SREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLV 608
           S+EF+ ++  DL    V+VFTPRG++K LP+GAT +D+AY+IHTE+GN+   AKVNG LV
Sbjct: 371 SKEFMQSLRLDLFKDEVYVFTPRGDVKELPEGATPIDFAYLIHTEVGNRCAGAKVNGKLV 430

Query: 609 SPTHVLANAEVVEIITYN 626
                L + + +E+IT N
Sbjct: 431 PLGTALKSGDTIEVITDN 448


>gi|270291333|ref|ZP_06197555.1| GTP pyrophosphokinase [Pediococcus acidilactici 7_4]
 gi|418069368|ref|ZP_12706646.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
           [Pediococcus acidilactici MA18/5M]
 gi|270280179|gb|EFA26015.1| GTP pyrophosphokinase [Pediococcus acidilactici 7_4]
 gi|357536837|gb|EHJ20865.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
           [Pediococcus acidilactici MA18/5M]
          Length = 743

 Score =  327 bits (838), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 193/485 (39%), Positives = 280/485 (57%), Gaps = 48/485 (9%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++      V++A   A   H  Q R+SGEP+I+HP++VA IL  L++D E++A+G LHD
Sbjct: 19  YMNEEHTAFVQKACDFASYVHKEQYRQSGEPYIMHPIQVAGILANLKMDPETVASGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
           TVEDT ++T   +EE FG  V  IV+G   VSK+ K+K K    S Q+  A++ R++ LA
Sbjct: 79  TVEDT-LITLGDVEELFGHDVAVIVDG---VSKISKIKYK----SNQEQLAENHRKLLLA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M++++RVIIVKLADRLHNMRTL H+ P KQ  I+ ETL+++APLA+ LG+  IK ELE++
Sbjct: 131 MSQDIRVIIVKLADRLHNMRTLRHLRPDKQRRISNETLEIYAPLAERLGISTIKWELEDI 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           +  Y N + Y     R+  L      + EE     + ++E D   DL     +I    K 
Sbjct: 191 ALRYLNPQQYY----RIVHLMNSRRAQREEYINSAIGELE-DAIADLHLKHVDIYGRPKH 245

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIY+ ++      +++  +  +R+I                + CY VLG +H  W PI
Sbjct: 246 IYSIYRKMVDQHKQFSQIYDLLAVRVI------------TDTVRDCYAVLGAIHAKWKPI 293

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK N YQSLHTT++         LE QIRTE M  +AE G+AAH++ +  
Sbjct: 294 PGRFKDYIAMPKANMYQSLHTTVVG---PEGRPLEFQIRTEAMHRVAEYGVAAHWAYKEG 350

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
           +T  V                  NA  A +++W   I E Q+E   +  + +F++ +  D
Sbjct: 351 ITDEVNQ----------------NATDA-KLNWFKEIVELQDE---SNDAADFMEGVKGD 390

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           L G RV+VFTP+G++  LPKGA  +D AY IHTE+GN    AKVNG +V   + + N ++
Sbjct: 391 LFGDRVYVFTPKGDVFELPKGAGPLDLAYTIHTEVGNHATGAKVNGKIVPLDYTIKNGDI 450

Query: 620 VEIIT 624
           VEI+T
Sbjct: 451 VEILT 455


>gi|307707439|ref|ZP_07643921.1| GTP pyrophosphokinase [Streptococcus mitis NCTC 12261]
 gi|307616391|gb|EFN95582.1| GTP pyrophosphokinase [Streptococcus mitis NCTC 12261]
          Length = 716

 Score =  327 bits (838), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 187/485 (38%), Positives = 285/485 (58%), Gaps = 50/485 (10%)

Query: 146 LELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTN 205
           +  V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD  ++A G LHD VEDT+
Sbjct: 1   MAFVHKALVYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGFLHDVVEDTD 60

Query: 206 VVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVR 265
             T + +E EFG  VR IV+G   V+KLGK+K K+    +    A++ R+M +AM+E++R
Sbjct: 61  A-TLDDLEREFGPDVRVIVDG---VTKLGKVKYKSHEEQL----AENHRKMLMAMSEDIR 112

Query: 266 VIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTN 325
           VI+VKL+DRLHNMRTL H+   KQ  I+ ET++++APLA  LG+  +K ELE+LSF Y N
Sbjct: 113 VILVKLSDRLHNMRTLKHLRKDKQERISKETMEIYAPLAHRLGISSVKWELEDLSFRYLN 172

Query: 326 AEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYK 385
             ++ K+   + +  +E E  ++E    ++ K+E  ++     +K +I    K  YSI++
Sbjct: 173 PTEFYKITHMMKEKRREREALVDE----VVTKLE--EYTTDRHLKGKIYGRPKHIYSIFR 226

Query: 386 AVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKD 445
            +   R    E+  +  +R I+              Q   Y +LG VH +W P+P   KD
Sbjct: 227 KMQDKRKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHELWKPMPGRFKD 274

Query: 446 YIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVG 505
           YIA  K NGYQS+HTT    +Y     +E QIRT+EM  +AE G+AAH++ +  + G V 
Sbjct: 275 YIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAYKKGIKGQV- 329

Query: 506 HARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSRV 565
                           N+   A+ ++W+  + E Q++      ++EFVD++  + L   +
Sbjct: 330 ----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDSVKENYLAEEI 370

Query: 566 FVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITY 625
           +VFTP G +++LPK +  +D+AY IHT++G K   AKVNG +V  T  L   + VEI+T 
Sbjct: 371 YVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKTGDQVEIVTN 430

Query: 626 NVSFS 630
             SF 
Sbjct: 431 PNSFG 435


>gi|304385085|ref|ZP_07367431.1| GTP diphosphokinase [Pediococcus acidilactici DSM 20284]
 gi|427439778|ref|ZP_18924342.1| GTP diphosphokinase [Pediococcus lolii NGRI 0510Q]
 gi|304329279|gb|EFL96499.1| GTP diphosphokinase [Pediococcus acidilactici DSM 20284]
 gi|425787910|dbj|GAC45130.1| GTP diphosphokinase [Pediococcus lolii NGRI 0510Q]
          Length = 745

 Score =  327 bits (838), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 193/485 (39%), Positives = 280/485 (57%), Gaps = 48/485 (9%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++      V++A   A   H  Q R+SGEP+I+HP++VA IL  L++D E++A+G LHD
Sbjct: 21  YMNEEHTAFVQKACDFASYVHKEQYRQSGEPYIMHPIQVAGILANLKMDPETVASGFLHD 80

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
           TVEDT ++T   +EE FG  V  IV+G   VSK+ K+K K    S Q+  A++ R++ LA
Sbjct: 81  TVEDT-LITLGDVEELFGHDVAVIVDG---VSKISKIKYK----SNQEQLAENHRKLLLA 132

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M++++RVIIVKLADRLHNMRTL H+ P KQ  I+ ETL+++APLA+ LG+  IK ELE++
Sbjct: 133 MSQDIRVIIVKLADRLHNMRTLRHLRPDKQRRISNETLEIYAPLAERLGISTIKWELEDI 192

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           +  Y N + Y     R+  L      + EE     + ++E D   DL     +I    K 
Sbjct: 193 ALRYLNPQQYY----RIVHLMNSRRAQREEYINSAIGELE-DAIADLHLKHVDIYGRPKH 247

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIY+ ++      +++  +  +R+I                + CY VLG +H  W PI
Sbjct: 248 IYSIYRKMVDQHKQFSQIYDLLAVRVI------------TDTVRDCYAVLGAIHAKWKPI 295

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK N YQSLHTT++         LE QIRTE M  +AE G+AAH++ +  
Sbjct: 296 PGRFKDYIAMPKANMYQSLHTTVVG---PEGRPLEFQIRTEAMHRVAEYGVAAHWAYKEG 352

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
           +T  V                  NA  A +++W   I E Q+E   +  + +F++ +  D
Sbjct: 353 ITDEVNQ----------------NATDA-KLNWFKEIVELQDE---SNDAADFMEGVKGD 392

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           L G RV+VFTP+G++  LPKGA  +D AY IHTE+GN    AKVNG +V   + + N ++
Sbjct: 393 LFGDRVYVFTPKGDVFELPKGAGPLDLAYTIHTEVGNHATGAKVNGKIVPLDYTIKNGDI 452

Query: 620 VEIIT 624
           VEI+T
Sbjct: 453 VEILT 457


>gi|16330670|ref|NP_441398.1| (p)ppGpp 3'-pyrophosphohydrolase [Synechocystis sp. PCC 6803]
 gi|383322412|ref|YP_005383265.1| (p)ppGpp 3'-pyrophosphohydrolase [Synechocystis sp. PCC 6803
           substr. GT-I]
 gi|383325581|ref|YP_005386434.1| (p)ppGpp 3'-pyrophosphohydrolase [Synechocystis sp. PCC 6803
           substr. PCC-P]
 gi|383491465|ref|YP_005409141.1| (p)ppGpp 3'-pyrophosphohydrolase [Synechocystis sp. PCC 6803
           substr. PCC-N]
 gi|384436732|ref|YP_005651456.1| (p)ppGpp 3'-pyrophosphohydrolase [Synechocystis sp. PCC 6803]
 gi|451814828|ref|YP_007451280.1| (p)ppGpp 3'-pyrophosphohydrolase [Synechocystis sp. PCC 6803]
 gi|6647853|sp|P74007.1|SPOT_SYNY3 RecName: Full=Probable guanosine-3',5'-bis(diphosphate)
           3'-pyrophosphohydrolase; AltName: Full=Penta-phosphate
           guanosine-3'-pyrophosphohydrolase; Short=(ppGpp)ase
 gi|1653162|dbj|BAA18078.1| (p)ppGpp 3'-pyrophosphohydrolase [Synechocystis sp. PCC 6803]
 gi|339273764|dbj|BAK50251.1| (p)ppGpp 3'-pyrophosphohydrolase [Synechocystis sp. PCC 6803]
 gi|359271731|dbj|BAL29250.1| (p)ppGpp 3'-pyrophosphohydrolase [Synechocystis sp. PCC 6803
           substr. GT-I]
 gi|359274901|dbj|BAL32419.1| (p)ppGpp 3'-pyrophosphohydrolase [Synechocystis sp. PCC 6803
           substr. PCC-N]
 gi|359278071|dbj|BAL35588.1| (p)ppGpp 3'-pyrophosphohydrolase [Synechocystis sp. PCC 6803
           substr. PCC-P]
 gi|407958589|dbj|BAM51829.1| (p)ppGpp 3'-pyrophosphohydrolase [Synechocystis sp. PCC 6803]
 gi|451780797|gb|AGF51766.1| (p)ppGpp 3'-pyrophosphohydrolase [Synechocystis sp. PCC 6803]
          Length = 760

 Score =  327 bits (838), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 189/477 (39%), Positives = 270/477 (56%), Gaps = 47/477 (9%)

Query: 148 LVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVV 207
           L+ RA   A++ H  Q+R+SGEP+I HPV VA +L +L  D   IAAG LHD VEDT++ 
Sbjct: 53  LICRAFCFAYDLHAQQRRKSGEPYIAHPVAVAGLLRDLGGDEAMIAAGFLHDVVEDTDI- 111

Query: 208 TFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVI 267
           + E+IE  FG     +VEG TK+SK           S  + +A++ R+MFLAM +++RVI
Sbjct: 112 SIEQIEALFGEETASLVEGVTKLSKFN-------FSSTTEHQAENFRRMFLAMAKDIRVI 164

Query: 268 IVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAE 327
           +VKLADRLHNMRTL  + P KQ  IA ET  +FAPLA  LG+++ K ELE+LSF Y   +
Sbjct: 165 VVKLADRLHNMRTLDALSPEKQRRIARETKDIFAPLANRLGIWRFKWELEDLSFKYLEPD 224

Query: 328 DYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAV 387
            Y K++  V +   + E  LE    +L  ++ D+          E++   K  Y IY  +
Sbjct: 225 SYRKIQSLVVEKRGDRESRLETVKDMLRFRLRDEGIEHF-----ELQGRPKHLYGIYYKM 279

Query: 388 LKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYI 447
                +  E+  IA LRII++ K              CY  L +VH ++ PIP   KDYI
Sbjct: 280 TSQDKAFEEIYDIAALRIIVESKGE------------CYRALSVVHDVFKPIPGRFKDYI 327

Query: 448 ATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHA 507
             PKPN YQSLHTT++         LE+QIRTEEM  +AE GIAAH+             
Sbjct: 328 GLPKPNRYQSLHTTVLGLTSRP---LEIQIRTEEMHHVAEYGIAAHWK-----------Y 373

Query: 508 RPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSRVFV 567
           + +G S        +      + +WL  + +WQ +      ++E+V+ + ++L    V+V
Sbjct: 374 KESGGSENATLTSTDE-----KFTWLRQLLDWQSDL---KDAQEYVENLKQNLFDDDVYV 425

Query: 568 FTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
           FTP+GE+ +L +GAT VD+AY IHTE+G+ M  A+VNG  +     L N ++VEI+T
Sbjct: 426 FTPKGEVISLARGATPVDFAYRIHTEVGHHMKGARVNGQWLGVDTRLKNGDIVEIVT 482


>gi|417753006|ref|ZP_12401162.1| GTP diphosphokinase [Streptococcus dysgalactiae subsp. equisimilis
           SK1249]
 gi|333771103|gb|EGL48067.1| GTP diphosphokinase [Streptococcus dysgalactiae subsp. equisimilis
           SK1249]
          Length = 739

 Score =  327 bits (838), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 185/492 (37%), Positives = 289/492 (58%), Gaps = 51/492 (10%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++  +   V++AL  A  AH  Q R+SGEP+I+HP++VA IL +L LD  ++A G LHD
Sbjct: 19  YMNETDAAFVKKALDYATAAHFYQVRKSGEPYIVHPIQVAGILADLHLDAVTVACGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            VEDT++ T + IE +FG  VR IV+G   V+KLGK++ K+    +    A++ R+M +A
Sbjct: 79  VVEDTDI-TLDNIEFDFGKDVRDIVDG---VTKLGKVEYKSHEEQL----AENHRKMLMA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M++++RVI+VKLADRLHNMRTL H+   KQ  I+ ET++++APLA  LG+ +IK ELE+L
Sbjct: 131 MSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELEDL 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEE-ANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
           +F Y N  ++ K+   + +  +E E  +++   KI     E   F D       +    K
Sbjct: 191 AFRYLNETEFYKISHMMNEKRREREALVDDIVTKIKSYTTEQRLFGD-------VYGRPK 243

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIY+ +   +   +++  +  +R +++             Q   Y ++G +H +W P
Sbjct: 244 HIYSIYRKMRDKKKRFDQIFDLIAIRCVME------------TQSDVYAMVGYIHELWRP 291

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PK NGYQS+HTT    +Y     +E+QIRT+EM  +AE G+AAH++ + 
Sbjct: 292 MPGRFKDYIAAPKANGYQSIHTT----VYGPKGPIEIQIRTKEMHQVAEYGVAAHWAYK- 346

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                        +  RGK   +N A   + ++W+  + E Q+    N  + +FVD++  
Sbjct: 347 -------------KGVRGK---VNQAEQKVGMNWIKELVELQD--ASNGDAVDFVDSVKE 388

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           D+   R++VFTP G ++ LPK +  +D+AY IHT++G K + AKVNG +V  T  L   +
Sbjct: 389 DIFSERIYVFTPTGAVQELPKDSGPIDFAYAIHTQVGEKAIGAKVNGRMVPLTAKLKTGD 448

Query: 619 VVEIITYNVSFS 630
           VVEI+T   SF 
Sbjct: 449 VVEIVTNPNSFG 460


>gi|227513277|ref|ZP_03943326.1| GTP diphosphokinase [Lactobacillus buchneri ATCC 11577]
 gi|227083478|gb|EEI18790.1| GTP diphosphokinase [Lactobacillus buchneri ATCC 11577]
          Length = 743

 Score =  327 bits (838), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 191/499 (38%), Positives = 292/499 (58%), Gaps = 52/499 (10%)

Query: 129 RLW--EDLRPTIS-YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGEL 185
           ++W  +D+   +S Y++ + +++V+RA   A  AH  Q R+SGEP+I HP++VA IL +L
Sbjct: 4   KIWTADDVIKKVSEYMNDDHVKMVKRAYEFAKIAHKDQMRQSGEPYITHPIQVAGILADL 63

Query: 186 ELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSV 245
            +D E++++G LHD VEDT       ++E FG  V  IV+G   V+KL K+K K    S 
Sbjct: 64  HMDPETVSSGFLHDVVEDTGA-ELSDVQELFGNDVALIVDG---VTKLSKIKYK----SS 115

Query: 246 QDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAK 305
           ++  A++ R++ LAM +++RV+IVKLADRLHNMRTL  + P KQ  IA ETL+++AP+A 
Sbjct: 116 EERLAENHRKLLLAMCKDIRVMIVKLADRLHNMRTLKSLRPDKQRRIAKETLEIYAPIAD 175

Query: 306 LLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLD 365
            LG+  IK ELE++S  Y N + Y ++   +     +    +++A   +   I D     
Sbjct: 176 RLGIGTIKWELEDISLRYLNPQQYYRIVHLMNSRRDQRVDYIQKAINEVKSAISD----- 230

Query: 366 LMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQIC 425
            + +K+EI    K  YS+YK ++      +++  +  +R+I++              + C
Sbjct: 231 -LDIKSEIYGRPKHIYSVYKKMVDKHKQFSQIYDLLAIRVIVQSI------------KDC 277

Query: 426 YHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLI 485
           Y VLG +H  W P+P   KDYIA PK N YQSLHTT+I    +    LEVQIRTEEM  +
Sbjct: 278 YAVLGAIHTEWKPMPGRFKDYIAMPKANMYQSLHTTVIGPEGKP---LEVQIRTEEMHRV 334

Query: 486 AERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVG 545
           AE GIAAH++ +  +T  V  ++ N                  +++W   I E QE+   
Sbjct: 335 AEFGIAAHWAYKEGITNGVKGSQDNN-----------------KLNWFKQIIELQED--- 374

Query: 546 NMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNG 605
              + +F+D++  +L G  V+VFTP+G++  LPKGA  +D AYMIHTE+GN    AKVNG
Sbjct: 375 TDDAADFMDSVKGELFGDHVYVFTPKGDVFELPKGAGPLDMAYMIHTEVGNHTTGAKVNG 434

Query: 606 NLVSPTHVLANAEVVEIIT 624
            +V   H + N ++V+IIT
Sbjct: 435 KIVPLDHQVKNGDIVDIIT 453


>gi|113971943|ref|YP_735736.1| bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis
           pyrophosphate 3'-pyrophosphohydrolase [Shewanella sp.
           MR-4]
 gi|113886627|gb|ABI40679.1| (p)ppGpp synthetase I, SpoT/RelA [Shewanella sp. MR-4]
          Length = 700

 Score =  327 bits (838), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 200/503 (39%), Positives = 289/503 (57%), Gaps = 65/503 (12%)

Query: 130 LWEDLRPTIS-YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
           L+E L+ + S YL P ++EL+++A  +A +AH+GQ R SGEP+I HPV VARIL E+ LD
Sbjct: 3   LFEGLKESASGYLEPEQVELLKQAYQVARDAHEGQMRTSGEPYITHPVAVARILAEMRLD 62

Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
            E++ A LLHDT+EDT  VT E + E+FG  V  +VEG   VSKL KLK +++    ++ 
Sbjct: 63  HETLMAALLHDTIEDT-YVTKEDLAEQFGEAVAELVEG---VSKLDKLKFRDK----KEA 114

Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
           +A++ R+M +AMT+++RVI++KLADR HNMRTL  + P K+  IA ETL+++AP+A  LG
Sbjct: 115 QAENFRKMMMAMTQDIRVILIKLADRTHNMRTLGALRPDKRRRIARETLEIYAPIANRLG 174

Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQF--LDL 366
           ++ IK+ELE+L F     + Y  ++ RV    KE  K      K L++ IE      L+ 
Sbjct: 175 IHNIKTELEDLGF-----QAYYPMRYRV---LKEVVKAARGNRKELIQGIEAAVLTRLND 226

Query: 367 MTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICY 426
             +K +++   K  YSIY  +        EV  I   R+I+                 CY
Sbjct: 227 AGIKGKVKGREKNLYSIYNKMQSKELQFQEVMDIYAFRVIV------------DSIDTCY 274

Query: 427 HVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTL-----IPFLYESMFRLEVQIRTEE 481
            VLG +HG++ P P   KDYIA PK NGYQSLHT+L     +P        +E+QIRTE+
Sbjct: 275 RVLGAMHGLYKPRPGRFKDYIAIPKANGYQSLHTSLFGPHGVP--------VEIQIRTED 326

Query: 482 MDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQE 541
           MD +A++G+AAH+            A   G   +G T  +          W+ ++ E Q+
Sbjct: 327 MDQMADKGVAAHW------------AYKGGPDGQGTTTQVRAR------KWMQSLLELQQ 368

Query: 542 EFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAA 601
                 TS EFV+ +  +L    ++VFTP G I  LP  AT VD+AY +HT++GN  V A
Sbjct: 369 ---SASTSFEFVENVKTELFPEEIYVFTPEGRILELPVNATAVDFAYEVHTDVGNTCVGA 425

Query: 602 KVNGNLVSPTHVLANAEVVEIIT 624
           +VN      +  L + + VEIIT
Sbjct: 426 RVNRQAYPLSQPLISGQTVEIIT 448


>gi|399923746|ref|ZP_10781104.1| (p)ppGpp synthetase I SpoT/RelA [Peptoniphilus rhinitidis 1-13]
          Length = 715

 Score =  327 bits (838), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 195/486 (40%), Positives = 284/486 (58%), Gaps = 52/486 (10%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           SY    +++L+ RA  +A E H GQKR SGE +IIHP+ V+ IL ++ +D  +I AGLLH
Sbjct: 13  SYNENADIDLIMRAYKMAEEHHKGQKRNSGEDYIIHPLNVSLILADMNMDTATIVAGLLH 72

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT+V T E ++ EFG  +  +V+G TK+ KL          + ++ +A+++R+M L
Sbjct: 73  DVVEDTDV-TLEDVKNEFGEEIADLVDGVTKLKKLNYK-------NKEEKQAENIRKMVL 124

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM +++RVIIVKLADRLHNMRTL +M   K+   ATET++++AP+A  LGM +IK ELE+
Sbjct: 125 AMAKDIRVIIVKLADRLHNMRTLEYMTDAKKVEKATETVEIYAPIADRLGMSRIKWELED 184

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
           LS  Y + + Y ++   V     E E  +    K+L +       LD + +K EI+   K
Sbjct: 185 LSLRYLDEDGYYELVEMVNKRRNEREDLINHIIKVLKEN------LDKVGIKCEIKGRPK 238

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIYK + K     +E+  ++ +RI            L +  + CY  LG+VH ++ P
Sbjct: 239 NFYSIYKKMKKKGKVFDEIYDLSAVRI------------LTNSVKDCYGALGVVHTLFKP 286

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           IP   KDYIA PKPN YQSLHTT+I    E+    EVQIRT EM   AE GIAAH+  + 
Sbjct: 287 IPGRFKDYIAMPKPNKYQSLHTTVIDNNGET---FEVQIRTYEMHQTAEYGIAAHWKYKA 343

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
            V+               K    +       ++WL  + EWQ++        +F+DT+  
Sbjct: 344 GVS---------------KETAFDE-----NLTWLRQLLEWQKDL---NDPGDFMDTLKI 380

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           D     VFVFTP+G++ NLP+G+T +D+AY IH+++GN  V AKVNG +V   + L +  
Sbjct: 381 DFFADEVFVFTPKGDVINLPEGSTPIDFAYRIHSQVGNTCVGAKVNGRIVPLNYTLQSGN 440

Query: 619 VVEIIT 624
           +VE+IT
Sbjct: 441 IVEVIT 446


>gi|443322004|ref|ZP_21051040.1| (p)ppGpp synthetase, RelA/SpoT family [Gloeocapsa sp. PCC 73106]
 gi|442788304|gb|ELR98001.1| (p)ppGpp synthetase, RelA/SpoT family [Gloeocapsa sp. PCC 73106]
          Length = 754

 Score =  327 bits (838), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 193/477 (40%), Positives = 277/477 (58%), Gaps = 47/477 (9%)

Query: 148 LVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVV 207
           L+ +A   A+E H  Q R+SGEP+I+HPV VA +L +L  D   IAAG LHD VEDT V 
Sbjct: 41  LICQAYEFAYELHKQQTRKSGEPYIVHPVAVAGLLRDLGGDSAMIAAGFLHDVVEDTEV- 99

Query: 208 TFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVI 267
           + E IE  FG  VR++VEG TK+SK        E  S  + +A++ R+MFLAM +++RVI
Sbjct: 100 SLEEIESRFGEQVRQLVEGVTKLSKF-------EFSSKTERQAENFRRMFLAMAKDIRVI 152

Query: 268 IVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAE 327
           +VKLADRLHNMRTL H+   KQ +IA ET ++FAPLA  LG+ ++K ELE+LSF Y   E
Sbjct: 153 VVKLADRLHNMRTLQHLSLEKQQAIALETKEIFAPLANRLGIGRLKWELEDLSFKYLEPE 212

Query: 328 DYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAV 387
            Y  ++  +A+   + E  +E+  ++L  ++   Q + +  +  EI+   K  Y IY+ +
Sbjct: 213 AYRTMQNHIAEKRTDREARIEKVTQLLKDRL---QTIGIKII--EIQGRPKHLYGIYQKM 267

Query: 388 LKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYI 447
              +   NE+  IA LR+I+  K            + CY  L +VH  + PIP   KDYI
Sbjct: 268 CLQQKQFNEIYDIAGLRLIVDNK------------EECYRALAIVHDTFRPIPGRFKDYI 315

Query: 448 ATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHA 507
             PK N YQSLHT+++     +   LEVQIRT EM  +AE GIAAH+  +          
Sbjct: 316 GLPKSNRYQSLHTSVVGL---NGRPLEVQIRTLEMHQVAEYGIAAHWKYK---------- 362

Query: 508 RPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSRVFV 567
                   G +  +  ++   + +WL  + EWQ +      ++E++D++  +L    V+V
Sbjct: 363 ------ESGGSNQVQVSSGDEKFTWLRQLLEWQNDL---KDAQEYIDSLRDNLFEDDVYV 413

Query: 568 FTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
           FTP+G++  L +GAT VD+AY IHTEIGN +  AKVNG        L N ++VEIIT
Sbjct: 414 FTPQGDVMVLARGATPVDFAYRIHTEIGNHIKGAKVNGRWSVLDCSLENGDIVEIIT 470


>gi|373106414|ref|ZP_09520717.1| RelA/SpoT family protein [Stomatobaculum longum]
 gi|371652789|gb|EHO18197.1| RelA/SpoT family protein [Stomatobaculum longum]
          Length = 754

 Score =  327 bits (837), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 195/503 (38%), Positives = 293/503 (58%), Gaps = 51/503 (10%)

Query: 126 SPERLWEDLRPTISYLSP-NELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
            P+ L+E+L   I    P ++  L+ RA M A  AH  QKR+SGEP+IIHP+ VA IL +
Sbjct: 17  DPDLLYEELIAAIERYHPSDDTSLIHRAYMTAKNAHMDQKRKSGEPYIIHPLCVAIILAD 76

Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
           LELD E+I AGLLHD VEDT ++T E+I   FG  V  +V+G TK++++     K     
Sbjct: 77  LELDKETIIAGLLHDVVEDT-ILTREQISRVFGEDVAVLVDGVTKLTQITWTTDK----- 130

Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
             D++A++LR+MFLAM++++RVI++KLADRLHNMRTL HM P KQ   A ETL+++APLA
Sbjct: 131 -LDIQAENLRKMFLAMSQDIRVILIKLADRLHNMRTLQHMRPEKQREKAKETLEIYAPLA 189

Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQ-F 363
             LG+ ++K EL++L+  Y   + Y  ++ ++ +  K H  E     ++L   I + Q  
Sbjct: 190 DRLGISRLKVELDDLALRYLEPKAYRDLEEKIEE--KSHSTE-----RLLETIIAEVQGI 242

Query: 364 LDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQ 423
           ++   + + +    K  +SIYK ++    + +E+  +  +R++++               
Sbjct: 243 MNSSKIPSSVIGRRKHIFSIYKKMVNQHKTFDEIYDLFAVRVLVQ------------DLN 290

Query: 424 ICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMD 483
            CY  LG +H  +TP+    KDYIA PKPN YQSLHTT+   L+ +    EVQIRT EMD
Sbjct: 291 DCYAALGQLHVHFTPLSERFKDYIARPKPNRYQSLHTTV---LFHNGTPFEVQIRTYEMD 347

Query: 484 LIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEF 543
            +AE GIAAH+  +                 +G+   L     A ++ WL  I EWQ E 
Sbjct: 348 KVAEYGIAAHWKYK--------------EKAKGENPTLTGGE-AEKMRWLRQILEWQREM 392

Query: 544 VGNMTSREFVDTITRDL--LGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAA 601
             N   +EF+  +  +L      V+ FTP G++K LP G+T +D+AY IH+ +GN MV A
Sbjct: 393 PDN---KEFLSDVKNELNPFADMVYAFTPGGDVKTLPTGSTPIDFAYSIHSAVGNCMVGA 449

Query: 602 KVNGNLVSPTHVLANAEVVEIIT 624
           +VNG +V   + + N + +EI+T
Sbjct: 450 RVNGRMVPLDYQIQNGDRIEILT 472


>gi|334119644|ref|ZP_08493729.1| (p)ppGpp synthetase I, SpoT/RelA [Microcoleus vaginatus FGP-2]
 gi|333457806|gb|EGK86427.1| (p)ppGpp synthetase I, SpoT/RelA [Microcoleus vaginatus FGP-2]
          Length = 758

 Score =  327 bits (837), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 207/513 (40%), Positives = 286/513 (55%), Gaps = 51/513 (9%)

Query: 113 LSPSVSSDAFKEDSPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFI 172
           + P+V  D  +E    R   D  P  +  S ++  L+ RA   A + H+GQ R+SGEP+I
Sbjct: 12  IDPAVVPDWLQECLNTRSQPDGGPNPNCSSTDD-SLICRAFEFARDLHEGQYRKSGEPYI 70

Query: 173 IHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSK 232
            HPV VA IL  +  +   IAAG LHD VEDT++ T E IE+ FGA VR++VEG TK+SK
Sbjct: 71  CHPVAVAGILRYMGGNNVMIAAGFLHDIVEDTDI-TLEEIEQRFGAEVRQLVEGVTKLSK 129

Query: 233 LGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSI 292
                 K E        A++ R+MFLAM +++RVI+VKLADRLHNMRTL H+   KQ SI
Sbjct: 130 F-NFSSKTER------LAENFRRMFLAMAKDIRVIVVKLADRLHNMRTLEHLSEEKQRSI 182

Query: 293 ATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANK 352
           A ET  +FAPLA  LG+ + K ELE+L+F Y   E Y +++  VA+   + E +L E   
Sbjct: 183 ALETRDIFAPLANRLGIGRFKWELEDLAFKYLEPEAYREIQELVAEKRADRETQLAEVTD 242

Query: 353 ILMKKIEDDQFLDLMTVKT-EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKP 411
            L ++      LD + +K  E+    K  Y IY  + + +   N+V  IA +RII++   
Sbjct: 243 CLRER------LDNLGIKCYEVSGRPKHLYGIYGKMQRRQKGFNQVYDIAAVRIIVESN- 295

Query: 412 CSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMF 471
                        CY  L +VH  + PIP   KDYI  PK N YQSLHT +I     S  
Sbjct: 296 -----------DDCYRALAIVHDSFRPIPGRFKDYIGLPKANRYQSLHTGVIG---TSGR 341

Query: 472 RLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRIS 531
            +EVQIRT  M  IAE GIAAH+             +  G S    TV  ++     + +
Sbjct: 342 PIEVQIRTVAMHHIAEYGIAAHWK-----------YKETGGS--NTTVTGDDE----KFT 384

Query: 532 WLNAIREWQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIH 591
           WL  + EWQ +       RE++ +I  +L    ++VFTP G++  L  G+T VD+AY IH
Sbjct: 385 WLRQLLEWQSDL---KDDREYLQSIKDNLFDEDIYVFTPNGDVIALNSGSTPVDFAYRIH 441

Query: 592 TEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
           TEIGN+   A+VNG +V+   VL N ++VEI+T
Sbjct: 442 TEIGNRCTGARVNGRMVTLDKVLKNGDIVEILT 474


>gi|373465559|ref|ZP_09557016.1| GTP diphosphokinase [Lactobacillus kisonensis F0435]
 gi|371760145|gb|EHO48845.1| GTP diphosphokinase [Lactobacillus kisonensis F0435]
          Length = 748

 Score =  327 bits (837), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 201/527 (38%), Positives = 299/527 (56%), Gaps = 68/527 (12%)

Query: 98  RSSLLHVACKRWRLCLSPSVSSDAFKEDSPERLWEDLRPTISYLSPNELELVRRALMLAF 157
           R  L+ +A K W        + D  K+ S             Y++   ++ V++A   A 
Sbjct: 2   REELIRLATKVW-------TADDVIKKVS------------EYMNDEHVKQVKKAYEFAR 42

Query: 158 EAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFG 217
            AH  QKR+SGEP+I HP++VA IL +L +D E+++AG LHD VEDT  V  + I E FG
Sbjct: 43  IAHQDQKRQSGEPYITHPIQVAGILADLHMDPETVSAGFLHDVVEDTGAVLGD-IRELFG 101

Query: 218 ATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHN 277
             V  IV+G   V+KL K+K K    S Q+  A++ R++ LAM +++RV+IVKLADRLHN
Sbjct: 102 DDVALIVDG---VTKLSKIKYK----SSQERLAENHRKLLLAMCKDIRVMIVKLADRLHN 154

Query: 278 MRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVA 337
           MRTL  + P KQ  IA ETL+++AP+A  LG+  IK ELE++S  Y N + Y ++   + 
Sbjct: 155 MRTLKSLRPDKQRRIAKETLEIYAPIADRLGIGTIKWELEDISLRYLNPQQYYRIVHLMN 214

Query: 338 DLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEV 397
               +    +++A   +   I D      + +K+EI    K  YS+Y+ +++     +++
Sbjct: 215 SRRDQRVDYIKKAISEVKSAISD------LDIKSEIYGRPKHIYSVYRKMVEKHKQFSQI 268

Query: 398 NQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQS 457
             +  +R+I        VG +      CY VLG +H  W P+P   KDYIA PK N YQS
Sbjct: 269 YDLLAIRVI--------VGSIKD----CYAVLGAIHSKWKPMPGRFKDYIAMPKANMYQS 316

Query: 458 LHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGK 517
           LHTT+I    +    LEVQIRTEEM  +AE GIAAH++   +  G+    R   ++ +G 
Sbjct: 317 LHTTVIGPEGKP---LEVQIRTEEMHRVAEFGIAAHWA---YKEGI----RSEVKASQGI 366

Query: 518 TVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNL 577
           T+          ++W   I E QE+      + +F+D++  +L G  V+VFTP+G++  L
Sbjct: 367 TI----------LNWFKQIIELQED---TDDAADFMDSVKGELFGDHVYVFTPKGDVYEL 413

Query: 578 PKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
           PKGA  +D AYMIHTE+GN    A+VNG +V   H + N ++V+IIT
Sbjct: 414 PKGAGPLDMAYMIHTEVGNHTTGARVNGKIVPLDHQVKNGDIVDIIT 460


>gi|251772536|gb|EES53102.1| GTP pyrophosphokinase [Leptospirillum ferrodiazotrophum]
          Length = 745

 Score =  327 bits (837), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 190/495 (38%), Positives = 298/495 (60%), Gaps = 51/495 (10%)

Query: 132 EDLRPTISYLSPN--ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDW 189
           E L   +S  +PN   L+L+R+A  LA ++H+GQ+R+SGE +I HP+ VA IL ++++D 
Sbjct: 26  ESLIEAVSSYNPNPEALDLLRKAYSLALKSHEGQRRQSGESYIHHPLSVAMILADMKVDT 85

Query: 190 ESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVK 249
           +S+   LLHDT+EDT++ T E IE  FG  V ++++G TK+ K    K + E       +
Sbjct: 86  QSLVTALLHDTLEDTSL-TPEEIESTFGKKVLQLIDGVTKIGKFHFKKSRAEK------Q 138

Query: 250 ADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGM 309
           A++ R+M L+M E++RV++VKLADRLHNMRT+  + P KQ SIA ETL ++APLA  LG+
Sbjct: 139 AENFRKMLLSMAEDIRVLLVKLADRLHNMRTIEWLDPAKQRSIAQETLDIYAPLANRLGI 198

Query: 310 YQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTV 369
             IK ELE+LSF   + E ++ ++ RVA   +E +  +++  + + + ++++       V
Sbjct: 199 GWIKLELEDLSFRALDPETFSDLRARVAKKRRESKNYIDQIVRSVTRVLQEN------GV 252

Query: 370 KTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVL 429
              +    K  YSIY+ +       +E+  +  +R+I   K              CY +L
Sbjct: 253 PGRVIGRYKHIYSIYRKMTMQEIPFDEIYDLMGIRVITDSKLH------------CYGIL 300

Query: 430 GLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERG 489
           GL+HG++ P+   +KD+IA PK N YQSLHTT+I    E +  +E QIRTEEM  +AE G
Sbjct: 301 GLLHGMYKPMTGRIKDFIAVPKSNMYQSLHTTVIG--PEGVL-IEFQIRTEEMHRVAEEG 357

Query: 490 IAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTS 549
           +AAH++ +    G          +P      L++  I   ++WL  + EWQ+E   N   
Sbjct: 358 VAAHWNYKENADG----------AP-----ALSDLQI---VTWLRQLVEWQKELSDN--- 396

Query: 550 REFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVS 609
            EF++++  +L    V+VFTP+G+++ + KGAT +D+AY IHTE+G++ V A+VNG  V 
Sbjct: 397 HEFMNSVKLNLFPDEVYVFTPKGDVREMIKGATAIDFAYAIHTEVGHRTVGARVNGRWVP 456

Query: 610 PTHVLANAEVVEIIT 624
              VL + +VVEIIT
Sbjct: 457 IKTVLESGDVVEIIT 471


>gi|227510270|ref|ZP_03940319.1| GTP diphosphokinase [Lactobacillus brevis subsp. gravesensis ATCC
           27305]
 gi|227189922|gb|EEI69989.1| GTP diphosphokinase [Lactobacillus brevis subsp. gravesensis ATCC
           27305]
          Length = 743

 Score =  327 bits (837), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 188/491 (38%), Positives = 286/491 (58%), Gaps = 49/491 (9%)

Query: 134 LRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIA 193
           ++    Y++ + +++V+RA   A  AH  Q R+SGEP+I HP++VA IL +L +D E+++
Sbjct: 12  IKKVSEYMNDDHVKMVKRAYEFAKIAHKDQMRQSGEPYITHPIQVAGILADLHMDPETVS 71

Query: 194 AGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDL 253
           +G LHD VEDT       ++E FG  V  IV+G   V+KL K+K K    S ++  A++ 
Sbjct: 72  SGFLHDVVEDTGA-ELSDVQELFGNDVALIVDG---VTKLSKIKYK----SSEERLAENH 123

Query: 254 RQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIK 313
           R++ LAM +++RV+IVKLADRLHNMRTL  + P KQ  IA ETL+++AP+A  LG+  IK
Sbjct: 124 RKLLLAMCKDIRVMIVKLADRLHNMRTLKSLRPDKQRRIAKETLEIYAPIADRLGIGTIK 183

Query: 314 SELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEI 373
            ELE++S  Y N + Y ++   +     +    +++A   +   I D      + +K+EI
Sbjct: 184 WELEDISLRYLNPQQYYRIVHLMNSRRDQRVDYIQKAINEVKSAISD------LDIKSEI 237

Query: 374 RSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVH 433
               K  YS+YK ++      +++  +  +R+I++              + CY VLG +H
Sbjct: 238 YGRPKHIYSVYKKMVDKHKQFSQIYDLLAIRVIVQSI------------KDCYAVLGAIH 285

Query: 434 GIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAH 493
             W P+P   KDYIA PK N YQSLHTT+I    +    LEVQIRTEEM  +AE GIAAH
Sbjct: 286 TEWKPMPGRFKDYIAMPKANMYQSLHTTVIGPEGKP---LEVQIRTEEMHRVAEFGIAAH 342

Query: 494 YSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFV 553
           ++ +  +T  V  ++ N                  +++W   I E QE+      + +F+
Sbjct: 343 WAYKEGITNGVKGSQDNN-----------------KLNWFKQIIELQED---TDDAADFM 382

Query: 554 DTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHV 613
           D++  +L G  V+VFTP+G++  LPKGA  +D AYMIHTE+GN    AKVNG +V   H 
Sbjct: 383 DSVKGELFGDHVYVFTPKGDVFELPKGAGPLDMAYMIHTEVGNHTTGAKVNGKIVPLDHQ 442

Query: 614 LANAEVVEIIT 624
           + N ++V+IIT
Sbjct: 443 VKNGDIVDIIT 453


>gi|307155133|ref|YP_003890517.1| (p)ppGpp synthetase I SpoT/RelA [Cyanothece sp. PCC 7822]
 gi|306985361|gb|ADN17242.1| (p)ppGpp synthetase I, SpoT/RelA [Cyanothece sp. PCC 7822]
          Length = 750

 Score =  327 bits (837), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 196/480 (40%), Positives = 273/480 (56%), Gaps = 48/480 (10%)

Query: 145 ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDT 204
           E+ L+ RA   A+E H GQ R+SGEP+I HP+ VA +L +L  D   IAAG LHD VEDT
Sbjct: 39  EIGLICRAFNFAYELHKGQYRKSGEPYIAHPIAVAGLLRDLGGDSTMIAAGFLHDVVEDT 98

Query: 205 NVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEV 264
            V T E IE+ FG  VR++VEG TK+SK      K E       +A++ R+MFLAM +++
Sbjct: 99  EV-TLEDIEQRFGDEVRQLVEGVTKLSKFN-FSSKTER------QAENFRRMFLAMAKDI 150

Query: 265 RVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYT 324
           RVI+VKLADRLHNMRTL H+   KQ SIA ET ++FAPLA  LG+ + K ELE+L F Y 
Sbjct: 151 RVIVVKLADRLHNMRTLEHLATEKQRSIALETREIFAPLANRLGIGRFKWELEDLCFKYL 210

Query: 325 NAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIY 384
             E Y +++  VA+   + E  +E+  + + + +       +     EI+   K  Y IY
Sbjct: 211 EPEAYREIQALVAEKRIDRETRIEQITETIREGLH-----QIGVNVLEIQGRPKHLYGIY 265

Query: 385 KAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMK 444
             + + R   +E+  IA LRII++ K              CY  L +VH ++ PIP   K
Sbjct: 266 HKMQRQRKEFHEIYDIAALRIIVETK------------DECYRALAIVHDVFKPIPGRFK 313

Query: 445 DYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLV 504
           DYI  PK N YQSLHTT++ F       LEVQIRT EM  IAE GIAAH+          
Sbjct: 314 DYIGLPKSNRYQSLHTTVVGFTGRP---LEVQIRTLEMHHIAEYGIAAHWK--------- 361

Query: 505 GHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSR 564
                  +   G    L + +   + +WL  + EWQ +      ++E+++ +  +L    
Sbjct: 362 ------YKESGGSNYNLTSED--EKFTWLRQLIEWQNDL---KDAQEYIENLKDNLFEDD 410

Query: 565 VFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
           V+VFTP+G++  L +GAT VD+AY IHTE+G+ M  A++NG        L N ++VEIIT
Sbjct: 411 VYVFTPQGDVIVLARGATPVDFAYRIHTEVGHHMKGARINGRWSVLDTPLHNGDIVEIIT 470


>gi|443315184|ref|ZP_21044689.1| (p)ppGpp synthetase, RelA/SpoT family [Leptolyngbya sp. PCC 6406]
 gi|442785224|gb|ELR95059.1| (p)ppGpp synthetase, RelA/SpoT family [Leptolyngbya sp. PCC 6406]
          Length = 762

 Score =  327 bits (837), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 196/479 (40%), Positives = 272/479 (56%), Gaps = 49/479 (10%)

Query: 147 ELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNV 206
           ELV RA   A+  H GQ R SGEP+I HP+ VA +L +L  D   IAAG LHD VEDT+V
Sbjct: 45  ELVCRAFEFAYALHQGQMRASGEPYICHPIAVASLLRDLGGDSAMIAAGFLHDIVEDTDV 104

Query: 207 VTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRV 266
            T E IE +FG  VRR+VEG TK+SK    + K E       +A++ R+MFLAM ++ RV
Sbjct: 105 -TPEEIEAQFGGEVRRLVEGVTKLSKF-NFQSKTER------QAENFRRMFLAMAQDARV 156

Query: 267 IIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNA 326
           I+VKLADRLHNMRTL H+ P KQ  IA ET ++FAPLA  LG+ + K ELE+LSF Y   
Sbjct: 157 IVVKLADRLHNMRTLEHLKPEKQRRIAQETSEIFAPLANRLGIGRFKWELEDLSFKYLEP 216

Query: 327 EDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVK-TEIRSVCKEPYSIYK 385
           + Y  ++  V++   + E  L+     L +++E+        VK  E+    K  Y IY+
Sbjct: 217 DAYRHMQDCVSEKRTDRESRLQLVAATLRERLEE------AGVKVVEVSGRPKHLYGIYR 270

Query: 386 AVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKD 445
            + + + + +E+  +A +R+I+  K              CY  L +VH  + PIP   KD
Sbjct: 271 KMERQQKAFHEIFDVAAVRVIVHNK------------DECYRTLAIVHDAFRPIPGRFKD 318

Query: 446 YIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVG 505
           YI  PKPN YQSLHT +   L      +EVQIRT EM  +AE GIAAH+           
Sbjct: 319 YIGLPKPNRYQSLHTVV---LGNHGRPIEVQIRTLEMHHVAEYGIAAHWK---------- 365

Query: 506 HARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSRV 565
             + +G S   +    +      + +WL  + EWQ +      +REF++ I  +L    V
Sbjct: 366 -YKESGGSSNTQVTTDDE-----KFTWLRQLLEWQSDL---KDAREFMEDIKGNLFAEDV 416

Query: 566 FVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
           +VFTP G++ +L +GAT VD+AY IHTE+GN    ++VNG +V     L N ++V IIT
Sbjct: 417 YVFTPDGDVVSLARGATPVDFAYRIHTEVGNHCAGSRVNGRIVPLDTPLQNGDIVSIIT 475


>gi|225175541|ref|ZP_03729535.1| (p)ppGpp synthetase I, SpoT/RelA [Dethiobacter alkaliphilus AHT 1]
 gi|225168870|gb|EEG77670.1| (p)ppGpp synthetase I, SpoT/RelA [Dethiobacter alkaliphilus AHT 1]
          Length = 721

 Score =  327 bits (837), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 194/494 (39%), Positives = 289/494 (58%), Gaps = 53/494 (10%)

Query: 133 DLRPTISYLSPNELELVR--RALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWE 190
           +L+  I    P E +  R   A   A EAH GQKR SGE +I HP+ V+ IL ELE+D +
Sbjct: 5   ELKEKIKLYYPVEPDWSRLNEAYKFAVEAHQGQKRFSGELYITHPLGVSHILAELEMDMD 64

Query: 191 SIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKA 250
           +I AGLLHD VEDT V T E IEE+FG  +  +V+G TK+SKL       E  S ++ +A
Sbjct: 65  TIVAGLLHDVVEDTEV-TLEDIEEKFGEEIAMLVDGVTKLSKL-------EYKSKEEHQA 116

Query: 251 DDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMY 310
           ++LR+MF+AM +++RV+++KLADR HNMRTL ++   KQ +I+ ETL+++APLA  LG+Y
Sbjct: 117 ENLRKMFIAMAKDIRVLLIKLADRTHNMRTLKYLTSIKQQAISRETLEIYAPLAHRLGIY 176

Query: 311 QIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVK 370
           +IK ELE+L+F +   + Y  +  ++A   +E E+ + +    L  K+ED      + ++
Sbjct: 177 KIKWELEDLAFRFLERDRYYALVDKLAKKRQEREQFIGQIMDTLEPKLED------VGIQ 230

Query: 371 TEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLG 430
             I    K  YSI + + +     +E+  +  +RII+               + CY  LG
Sbjct: 231 AHISGRPKHLYSISQKMKEQGKEFHEIYDLTAIRIIV------------DSLKDCYGALG 278

Query: 431 LVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGI 490
           +VH +W PIP   KDYIA PKPN YQSLHT ++    E    LEVQIRT EM   AE GI
Sbjct: 279 IVHTLWKPIPGRFKDYIAMPKPNMYQSLHTLVMVGKNEL---LEVQIRTWEMHRTAEFGI 335

Query: 491 AAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSR 550
           AAH+                 R   G     ++ +I  +++WL  I E Q++   +  + 
Sbjct: 336 AAHW-----------------RYKEGD--IRDDDSIDNKLTWLRQIMELQQD---SKDAS 373

Query: 551 EFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSP 610
           EF++ +  DL    VFVFTP+G++ +LP G+  +D+AY IHT+IG++ + A+VNG LV  
Sbjct: 374 EFMENVKLDLFADEVFVFTPKGDVIDLPAGSIPLDFAYKIHTDIGHRCIGARVNGRLVPL 433

Query: 611 THVLANAEVVEIIT 624
            + L   ++VE++T
Sbjct: 434 DYELKTGDIVEVMT 447


>gi|303229459|ref|ZP_07316249.1| GTP diphosphokinase [Veillonella atypica ACS-134-V-Col7a]
 gi|302515995|gb|EFL57947.1| GTP diphosphokinase [Veillonella atypica ACS-134-V-Col7a]
          Length = 746

 Score =  327 bits (837), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 184/486 (37%), Positives = 280/486 (57%), Gaps = 52/486 (10%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           SYL  +E + + +A  LA +AH+GQ R SGEP+I+HP+ VA IL  L++D  ++ A LLH
Sbjct: 32  SYLGDDECDQIMKAFTLADKAHEGQFRASGEPYIMHPLAVAEILAHLQIDHITLIAALLH 91

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT   T E IE+ FGA V  +V+G TK+++        +  + +D + ++ R+M L
Sbjct: 92  DVVEDTEY-TKEDIEKLFGAEVAFLVDGVTKLNQF-------QYETKEDRQMENYRKMIL 143

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM ++VRV+++KL DRLHNMRTL HM   KQ  IA ETL++FAPLA  LG++ +K ELE+
Sbjct: 144 AMAKDVRVVVIKLGDRLHNMRTLKHMRSDKQKRIAKETLEIFAPLAHRLGIFNVKWELED 203

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
           LSF Y   + Y  +     D  K+  +  E+     M+++   + L    +K +I+   K
Sbjct: 204 LSFRYLEPDKYYDL----VDQMKQKRQAREDIVNDTMEQLT--KALGEAGIKADIKGRPK 257

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIYK + K    ++++  +  +R+I+   P             CY VLG+ H IW P
Sbjct: 258 HFYSIYKKMKKDNRDLSQIYDLLAVRVIVDTVPD------------CYAVLGIAHSIWKP 305

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYI+ PK N YQSLHTT+I  + +    +E+QIRT EM  ++E G+AAH+    
Sbjct: 306 LPYRFKDYISMPKSNMYQSLHTTVIGTMGQP---VEIQIRTWEMHRVSEYGVAAHW---- 358

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                        R   G      +     +++WL  + EWQ+        +E V+ +  
Sbjct: 359 -------------RYKEGNKGA--DKEFDQKVAWLRQVLEWQD----TSNPKELVNALKL 399

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           D+    VFVFTP+G++  LP G+  +D+AY +HT++G++ V AKVNG +V   + L N +
Sbjct: 400 DVFSGEVFVFTPKGDVVKLPIGSVPLDFAYRVHTDVGHRCVGAKVNGKIVPLDYTLQNGD 459

Query: 619 VVEIIT 624
           +V+IIT
Sbjct: 460 IVDIIT 465


>gi|119509915|ref|ZP_01629057.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA [Nodularia
           spumigena CCY9414]
 gi|119465381|gb|EAW46276.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA [Nodularia
           spumigena CCY9414]
          Length = 756

 Score =  326 bits (836), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 200/505 (39%), Positives = 290/505 (57%), Gaps = 55/505 (10%)

Query: 127 PERLWEDLRPTISYLSPNELE-------LVRRALMLAFEAHDGQKRRSGEPFIIHPVEVA 179
           PE L + LR + +Y    E +       L+ +A   A++ H+GQ R+SGE +I HPV VA
Sbjct: 15  PEWLHKCLRESSAYKGEAEADRRYSDAVLIGKAFEFAYQLHEGQYRKSGELYISHPVAVA 74

Query: 180 RILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCK 239
            +L +L      IAAG LHD VEDT+V T E+IEE FG  VR++VEG TK+SK+     K
Sbjct: 75  GLLRDLGGSPAMIAAGFLHDVVEDTDV-TSEQIEEHFGPEVRQLVEGVTKLSKI-NFTSK 132

Query: 240 NENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQV 299
            E+      +A++ R+MFLAM +++RVI+VKLADRLHNMRTL +M    +   A ET  +
Sbjct: 133 TES------QAENFRRMFLAMAQDIRVIVVKLADRLHNMRTLQYMSESSRRRSAQETRDI 186

Query: 300 FAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIE 359
           FAPLA  LGM++IK ELE+LSF Y   E + +++  V++     E++L +   +L ++++
Sbjct: 187 FAPLANRLGMWRIKWELEDLSFKYLEPEAFRQIQDHVSEKRAAREEKLAKTTDMLRERLQ 246

Query: 360 DDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLC 419
                       +I    K  YSIY+ + + +   +E+  +A LRII++           
Sbjct: 247 QAGIH-----CQDISGRPKHLYSIYQKMQRQQKEFHEIYDLAALRIIVQTN--------- 292

Query: 420 SPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRT 479
              + CY  L +VH  + PIP   KDYI  PKPN YQSLHT +I     S   LE+QIRT
Sbjct: 293 ---EECYRALAVVHDAFRPIPSRFKDYIGLPKPNRYQSLHTGVIGL---SGRPLEIQIRT 346

Query: 480 EEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREW 539
            EM  +AE GIAAH+  +   TG             G T  L NA+   + +WL  + EW
Sbjct: 347 VEMHHVAEYGIAAHWKYK--ETG-------------GSTSQLTNAD--EKFTWLRHLLEW 389

Query: 540 QEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMV 599
           Q +      ++E++D++  +L    V+VFTP+G++  L  GAT +D+AY IHTE+GN   
Sbjct: 390 QSDL---KDAQEYLDSVKDNLFEDDVYVFTPKGDVVPLSPGATCIDFAYHIHTEVGNHCA 446

Query: 600 AAKVNGNLVSPTHVLANAEVVEIIT 624
            A+VNG +V  +  L N  +VEII+
Sbjct: 447 GARVNGRMVPLSTRLQNGAIVEIIS 471


>gi|417927861|ref|ZP_12571249.1| RelA/SpoT family protein [Streptococcus dysgalactiae subsp.
           equisimilis SK1250]
 gi|340765735|gb|EGR88261.1| RelA/SpoT family protein [Streptococcus dysgalactiae subsp.
           equisimilis SK1250]
          Length = 739

 Score =  326 bits (836), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 185/492 (37%), Positives = 288/492 (58%), Gaps = 51/492 (10%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++  +   V++AL  A  AH  Q R+SGEP+I+HP++VA IL +L LD  ++A G LHD
Sbjct: 19  YMNETDAAFVKKALDYATAAHFYQVRKSGEPYIVHPIQVAGILADLHLDAVTVACGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            VEDT++ T + IE +FG  VR IV+G   V+KLGK++ K+    +    A++ R+M +A
Sbjct: 79  VVEDTDI-TLDNIEFDFGKDVRDIVDG---VTKLGKVEYKSHEEQL----AENHRKMLMA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M++++RVI+VKLADRLHNMRTL H+   KQ  I+ ET++++APLA  LG+ +IK ELE+L
Sbjct: 131 MSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELEDL 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEE-ANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
           +F Y N  ++ K+   + +  +E E  +++   KI     E   F D       +    K
Sbjct: 191 AFRYLNETEFYKISHMMNEKRREREALVDDIVTKIKSYTTEQGLFGD-------VYGRPK 243

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIY+ +   +   +++  +  +R +++             Q   Y ++G +H +W P
Sbjct: 244 HIYSIYRKMRDKKKRFDQIFDLIAIRCVME------------TQSDVYAMVGYIHELWRP 291

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PK NGYQS+HTT    +Y     +E+QIRT+EM  +AE G+AAH++ + 
Sbjct: 292 MPGRFKDYIAAPKANGYQSIHTT----VYGPKGPIEIQIRTKEMHQVAEYGVAAHWAYK- 346

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                        +  RGK   +N A   + ++W+  + E Q+    N  + +FVD++  
Sbjct: 347 -------------KGVRGK---VNQAEQKVGMNWIKELVELQD--ASNGDAVDFVDSVKE 388

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           D+   R++VFTP G ++ LPK +  +D+AY IHT++G K   AKVNG +V  T  L   +
Sbjct: 389 DIFSERIYVFTPTGAVQELPKDSGPIDFAYAIHTQVGEKATGAKVNGRMVPLTAKLKTGD 448

Query: 619 VVEIITYNVSFS 630
           VVEI+T   SF 
Sbjct: 449 VVEIVTNPNSFG 460


>gi|320161070|ref|YP_004174294.1| GTP pyrophosphokinase [Anaerolinea thermophila UNI-1]
 gi|319994923|dbj|BAJ63694.1| GTP pyrophosphokinase [Anaerolinea thermophila UNI-1]
          Length = 733

 Score =  326 bits (836), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 193/499 (38%), Positives = 288/499 (57%), Gaps = 60/499 (12%)

Query: 142 SPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTV 201
           S  + E++ +A  LA +AH+GQKR SGEP+I H   VA IL ++ +    + AGLLHDTV
Sbjct: 15  SAADREMICKAYQLAEKAHEGQKRLSGEPYITHCEAVAAILADIRVPPTLVIAGLLHDTV 74

Query: 202 EDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKN----------------ENHSV 245
           EDT + T E I  EFG  + ++V+G TK++ L ++   +                E+   
Sbjct: 75  EDTPI-TLEDIRREFGDEIAKLVDGVTKLTHLPRVSRDDQYASEVEEYGLALETTEDTRR 133

Query: 246 QDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAK 305
           + +  + LR+ FLAM E++RV+++KLADRLHNMRTL +MP +K+  IA ETL +FAPLA 
Sbjct: 134 KQLAQETLRKTFLAMGEDIRVVLIKLADRLHNMRTLGYMPENKRRRIAQETLDIFAPLAN 193

Query: 306 LLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLD 365
            LG++QIK ELE+L+F Y N E Y ++   +A    + EK+++E    ++ ++     L+
Sbjct: 194 RLGIWQIKWELEDLAFRYVNPEKYKEIAELLAQKRADREKQIQE----IISRLR--TILE 247

Query: 366 LMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQIC 425
              ++ EI    K  YSIYK +++   S + +  +  +R+I+   P +         Q C
Sbjct: 248 QAGIQAEITGRPKHIYSIYKKMVEKSRSFDSLMDLRGVRLIV---PTT---------QDC 295

Query: 426 YHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLI 485
           Y  LG++H  W PIP    DYIA PK N YQSLHT +I   Y+    LEVQIRT EMD  
Sbjct: 296 YAALGIIHTHWRPIPHEFDDYIAAPKDNNYQSLHTAVI---YDDGKPLEVQIRTPEMDQN 352

Query: 486 AERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVG 545
           AE GIAAH+                 +   GK       +   R++ L  + +W++E   
Sbjct: 353 AEYGIAAHW---------------RYKEKHGKL----EEDYEQRVNLLRRLMDWRQEVT- 392

Query: 546 NMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNG 605
              + EF+D +  D+   RV+VFTP+G+I +LP+G+T +D+AY +HTEIG++   AKVNG
Sbjct: 393 --DAAEFMDGVRTDVFKDRVYVFTPKGDIIDLPQGSTPIDFAYHVHTEIGHRCRGAKVNG 450

Query: 606 NLVSPTHVLANAEVVEIIT 624
            LV+  + L   + VEI+T
Sbjct: 451 KLVTLDYELKTGDQVEILT 469


>gi|313895497|ref|ZP_07829053.1| GTP diphosphokinase [Selenomonas sp. oral taxon 137 str. F0430]
 gi|320528880|ref|ZP_08029972.1| GTP diphosphokinase [Selenomonas artemidis F0399]
 gi|402302377|ref|ZP_10821491.1| GTP diphosphokinase [Selenomonas sp. FOBRC9]
 gi|312975623|gb|EFR41082.1| GTP diphosphokinase [Selenomonas sp. oral taxon 137 str. F0430]
 gi|320138510|gb|EFW30400.1| GTP diphosphokinase [Selenomonas artemidis F0399]
 gi|400380596|gb|EJP33410.1| GTP diphosphokinase [Selenomonas sp. FOBRC9]
          Length = 742

 Score =  326 bits (836), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 195/512 (38%), Positives = 293/512 (57%), Gaps = 53/512 (10%)

Query: 117 VSSDAFKEDSPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPV 176
           +SS+A    + + + E +R    Y    +   + RA   A +AH GQ R SGE +IIHP+
Sbjct: 1   MSSEAHGNITLDMILEKIR---VYQPDADTAKIERAYQFAEKAHRGQARISGEAYIIHPL 57

Query: 177 EVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKL 236
            VA IL  L +D E+I A LLHD VEDT+  T E +EE FG  +  +++G   V+KLG++
Sbjct: 58  HVAYILTGLHMDDETICAALLHDVVEDTHA-TIEEMEELFGKNIAVLIDG---VTKLGRI 113

Query: 237 KCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATET 296
           +      S +DV+ ++ R+MFLAM +++RVI++KLADRLHNMRTL +M   K+  IA ET
Sbjct: 114 QYM----SKEDVQLENYRKMFLAMAKDIRVIMIKLADRLHNMRTLKYMREDKRQRIAHET 169

Query: 297 LQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMK 356
           L+V+APLA  LG+  IK ELE+L   Y   + Y  +   V    +E +  + ++ + + +
Sbjct: 170 LEVYAPLANRLGISNIKIELEDLCLRYLEPDAYYALVEEVKHKRRERQAFILDSIRQIRE 229

Query: 357 KIEDDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVG 416
           K+ED        ++ EI+   K  YSIY+ + +   S++E+  ++ +R+           
Sbjct: 230 KLED------AGIEAEIKGRAKHFYSIYRKMKRDNKSVSEIYDLSAVRV----------- 272

Query: 417 PLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQ 476
            L S  + CY VLG++H +W PIP   KDYIA PK NGYQSLHTT++         LE+Q
Sbjct: 273 -LVSSVKDCYGVLGVIHAMWKPIPGRFKDYIAMPKSNGYQSLHTTVMT----QGDPLEIQ 327

Query: 477 IRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAI 536
           IRT  M  ++E G+AAH+  +                  GK++    A    ++SWL  +
Sbjct: 328 IRTHAMHRVSEFGVAAHWKYK----------------ESGKSIGAGGA-ADQKMSWLRQM 370

Query: 537 REWQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGN 596
              Q+E+      +EF + +  D+    VFVFTPRG++ +LPKG+  +D+AY IHTEIG+
Sbjct: 371 VSLQKEY---DDPKEFFEALKLDVFSDEVFVFTPRGDVIDLPKGSNPIDFAYHIHTEIGH 427

Query: 597 KMVAAKVNGNLVSPTHVLANAEVVEIITYNVS 628
             V AKVNG +V   + L N ++V I+T   S
Sbjct: 428 HCVGAKVNGKIVPLEYKLKNGDIVSIVTNKAS 459


>gi|428223952|ref|YP_007108049.1| (p)ppGpp synthetase I SpoT/RelA [Geitlerinema sp. PCC 7407]
 gi|427983853|gb|AFY64997.1| (p)ppGpp synthetase I, SpoT/RelA [Geitlerinema sp. PCC 7407]
          Length = 763

 Score =  326 bits (836), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 195/478 (40%), Positives = 274/478 (57%), Gaps = 50/478 (10%)

Query: 148 LVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVV 207
           L+ RA   A+E H+GQ R SGEP+I HPV VA +L +L      IAAG LHD VEDT+V 
Sbjct: 49  LICRAFCFAYELHEGQFRASGEPYIAHPVAVAGLLRDLGGSPAMIAAGFLHDVVEDTDV- 107

Query: 208 TFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVI 267
           T + IEE FG  VR++VEG TK+SK      K E       +A++ R+MFLAM +++RVI
Sbjct: 108 TADEIEERFGPEVRQMVEGVTKLSKFN-FSSKTER------QAENFRRMFLAMAKDIRVI 160

Query: 268 IVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAE 327
           +VKLADRLHNMRTL H+P  K+  IA ET ++FAPLA  LG+ ++K ELE+L+F Y   +
Sbjct: 161 VVKLADRLHNMRTLEHLPDVKRRRIAMETREIFAPLANRLGIGRVKWELEDLAFKYLEPD 220

Query: 328 DYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAV 387
            Y +++  V++     E  + +   +L      D+         +I    K  YSIY+ +
Sbjct: 221 AYRQMQSLVSEKRGSREDRIAQVTDVLR-----DRMAQSGIRCVDISGRPKHLYSIYQKM 275

Query: 388 LKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYI 447
            +     +E+  IA +RII++              + CY  L +VH  + PIP   KDYI
Sbjct: 276 QRQHKEFHEIFDIAAIRIIVESN------------EECYRALAIVHDAFKPIPGRFKDYI 323

Query: 448 ATPKPNGYQSLHTTLIPFLYESMFR-LEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGH 506
             PKPN YQSLHT ++     +M R LEVQIRT EM  IAE GIAAH+            
Sbjct: 324 GLPKPNRYQSLHTVVVG----NMGRPLEVQIRTLEMHQIAEYGIAAHWK----------- 368

Query: 507 ARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSRVF 566
            + +G S    T          + +WL  + EWQ +      ++E++D I  +L    V+
Sbjct: 369 YKESGHSSSKFTASDE------KFTWLRQLLEWQNDL---KDAQEYLDNIKDNLFDDDVY 419

Query: 567 VFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
           VFTP+G++  L +GAT VD+AY IHTE+GN+   A+V+G +V+    L N ++VEIIT
Sbjct: 420 VFTPQGDVVALARGATSVDFAYRIHTEVGNRCAGARVDGRMVTLDTPLKNGDIVEIIT 477


>gi|386343774|ref|YP_006039938.1| (p)ppGpp synthetase [Streptococcus thermophilus JIM 8232]
 gi|339277235|emb|CCC18983.1| (p)ppGpp synthetase [Streptococcus thermophilus JIM 8232]
          Length = 739

 Score =  326 bits (836), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 181/491 (36%), Positives = 291/491 (59%), Gaps = 49/491 (9%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y+S ++L+LV +A   A +AH  Q R+SGEP+IIHP++VA IL +L LD  ++A G LHD
Sbjct: 19  YMSADDLKLVEKAWHYATDAHSEQFRQSGEPYIIHPIQVAGILADLHLDAVTVACGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            VEDT   T + +E +FG  VR IV+G   V+KLGK++ K+    +    A++ R+M +A
Sbjct: 79  VVEDTEK-TLDDLEADFGTDVRNIVDG---VTKLGKVEYKSHEEQL----AENHRKMLMA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M++++RVI+VKLADRLHNMRTL H+   KQ  I+ ET++++APLA  LG+ +IK ELE+ 
Sbjct: 131 MSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELEDT 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           +F Y N  ++ K+   + +  +E E  ++E    ++ KI+   +     +  ++    K 
Sbjct: 191 AFRYLNEVEFYKISHMMKEKRREREALVDE----IVDKIK--TYTAEQGLVGDVYGRPKH 244

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSI++ +   +   +++  +  +R +++                 Y +LG +H +W P+
Sbjct: 245 IYSIFRKMRDKKKRFDQIYDLIAIRCVME------------THSDVYAMLGYIHELWRPM 292

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK NGYQS+HTT    +Y     +E+QIRT++M  +AE G+AAH++ +  
Sbjct: 293 PGRFKDYIANPKSNGYQSIHTT----VYGPKGPIEIQIRTKDMHQVAEYGVAAHWAYKKG 348

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
           + G V                 ++   AL ++W+  + E Q+    N  ++ FVD++  D
Sbjct: 349 IKGKV-----------------DSKESALGMNWIKDLVELQD--ASNGDAKGFVDSVKED 389

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           +   R++VFTP+G+++ LPK +  +D+AY IHT++G K   AKVNG +V  T  L   +V
Sbjct: 390 IFSERIYVFTPKGDVQELPKDSGPIDFAYAIHTQVGEKATGAKVNGRMVPLTAKLKTGDV 449

Query: 620 VEIITYNVSFS 630
           VEI+T   SF 
Sbjct: 450 VEIVTNANSFG 460


>gi|116627099|ref|YP_819718.1| (p)ppGpp synthetase [Streptococcus thermophilus LMD-9]
 gi|116100376|gb|ABJ65522.1| Guanosine polyphosphate pyrophosphohydrolase/synthetase
           [Streptococcus thermophilus LMD-9]
          Length = 739

 Score =  326 bits (836), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 181/491 (36%), Positives = 291/491 (59%), Gaps = 49/491 (9%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y+S ++L+LV +A   A +AH  Q R+SGEP+IIHP++VA IL +L LD  ++A G LHD
Sbjct: 19  YMSADDLKLVEKAWHYATDAHSEQFRQSGEPYIIHPIQVAGILADLHLDAVTVACGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            VEDT   T + +E +FG  VR IV+G   V+KLGK++ K+    +    A++ R+M +A
Sbjct: 79  VVEDTEK-TLDDLEADFGTDVRNIVDG---VTKLGKVEYKSHEEQL----AENHRKMLMA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M++++RVI+VKLADRLHNMRTL H+   KQ  I+ ET++++APLA  LG+ +IK ELE+ 
Sbjct: 131 MSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELEDT 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           +F Y N  ++ K+   + +  +E E  ++E    ++ KI+   +     +  ++    K 
Sbjct: 191 AFRYLNEVEFYKISHMMKEKRREREALVDE----IVDKIK--TYTAEQGLVGDVYGRPKH 244

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSI++ +   +   +++  +  +R +++                 Y +LG +H +W P+
Sbjct: 245 IYSIFRKMRDKKKRFDQIYDLIAIRCVME------------THSDVYAMLGYIHELWRPM 292

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK NGYQS+HTT    +Y     +E+QIRT++M  +AE G+AAH++ +  
Sbjct: 293 PGRFKDYIANPKSNGYQSIHTT----VYGPKGPIEIQIRTKDMHQVAEYGVAAHWAYKKG 348

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
           + G V                 ++   AL ++W+  + E Q+    N  ++ FVD++  D
Sbjct: 349 IKGKV-----------------DSKESALGMNWIKDLVELQD--ASNGDAKGFVDSVKED 389

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           +   R++VFTP+G+++ LPK +  +D+AY IHT++G K   AKVNG +V  T  L   +V
Sbjct: 390 IFSERIYVFTPKGDVQELPKDSGPIDFAYAIHTQVGEKATGAKVNGRMVPLTAKLKTGDV 449

Query: 620 VEIITYNVSFS 630
           VEI+T   SF 
Sbjct: 450 VEIVTNANSFG 460


>gi|386316165|ref|YP_006012329.1| (p)ppGpp synthetase [Streptococcus dysgalactiae subsp. equisimilis
           ATCC 12394]
 gi|323126452|gb|ADX23749.1| (p)ppGpp synthetase [Streptococcus dysgalactiae subsp. equisimilis
           ATCC 12394]
          Length = 739

 Score =  326 bits (836), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 185/492 (37%), Positives = 288/492 (58%), Gaps = 51/492 (10%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++  +   V++AL  A  AH  Q R+SGEP+I+HP++VA IL +L LD  ++A G LHD
Sbjct: 19  YMNETDAAFVKKALDYATAAHFYQVRKSGEPYIVHPIQVAGILADLHLDAVTVACGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            VEDT++ T + IE +FG  VR IV+G   V+KLGK++ K+    +    A++ R+M +A
Sbjct: 79  VVEDTDI-TLDNIEFDFGKDVRDIVDG---VTKLGKVEYKSHEEQL----AENHRKMLMA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M++++RVI+VKLADRLHNMRTL H+   KQ  I+ ET++++APLA  LG+ +IK ELE+L
Sbjct: 131 MSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELEDL 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEE-ANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
           +F Y N  ++ K+   + +  +E E  +++   KI     E   F D       +    K
Sbjct: 191 AFRYLNETEFYKISHMMNEKRREREALVDDIVTKIKSYTTEQGLFGD-------VYGRPK 243

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIY+ +   +   +++  +  +R +++             Q   Y ++G +H +W P
Sbjct: 244 HIYSIYRKMRDKKKRFDQIFDLIAIRCVME------------TQSDVYAMVGYIHELWRP 291

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PK NGYQS+HTT    +Y     +E+QIRT+EM  +AE G+AAH++ + 
Sbjct: 292 MPGRFKDYIAAPKANGYQSIHTT----VYGPKGPIEIQIRTKEMHQVAEYGVAAHWAYK- 346

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                        +  RGK   +N A   + ++W+  + E Q+    N  + +FVD++  
Sbjct: 347 -------------KGVRGK---VNQAEQKVGMNWIKELVELQD--ASNGDAVDFVDSVKE 388

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           D+   R++VFTP G ++ LPK +  +D+AY IHT++G K   AKVNG +V  T  L   +
Sbjct: 389 DIFSERIYVFTPTGAVQELPKDSGPIDFAYAIHTQVGEKATGAKVNGRMVPLTAKLKTGD 448

Query: 619 VVEIITYNVSFS 630
           VVEI+T   SF 
Sbjct: 449 VVEIVTNPNSFG 460


>gi|254414928|ref|ZP_05028692.1| RelA/SpoT family protein [Coleofasciculus chthonoplastes PCC 7420]
 gi|196178417|gb|EDX73417.1| RelA/SpoT family protein [Coleofasciculus chthonoplastes PCC 7420]
          Length = 751

 Score =  326 bits (836), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 203/517 (39%), Positives = 291/517 (56%), Gaps = 54/517 (10%)

Query: 113 LSPSVSSDAFKEDSPERLWEDLRPTISYLS----PNELELVRRALMLAFEAHDGQKRRSG 168
           +S +V +  +  D P+ L +D   T S  S    P++  LV RA   A++ H  Q R SG
Sbjct: 1   MSATVLTTTYNLDVPDWL-QDCLSTASTTSDPSTPDDAALVVRAFEFAYQLHSEQYRASG 59

Query: 169 EPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGET 228
           EP+I HPV VA +L +L  +   +AAGLLHD VEDT+V T + IE  FGA VR +VEG T
Sbjct: 60  EPYIAHPVAVAGLLRDLGGNSTMMAAGLLHDVVEDTDV-TPDEIESIFGAEVRHLVEGVT 118

Query: 229 KVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHK 288
           K+SK      K E       +A++ R+MFLAM +++RVI+VKLADRLHNMRTL H+ P K
Sbjct: 119 KLSKFN-FSSKTER------QAENFRRMFLAMAKDIRVIVVKLADRLHNMRTLEHLKPQK 171

Query: 289 QSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELE 348
           Q +IA ET ++FAPLA  LG+ + K ELE+LSF Y     Y K++  VA+  ++ E+ L 
Sbjct: 172 QRAIAQETREIFAPLANRLGIGRFKWELEDLSFKYLEPNAYRKIQELVAERRQDREERLT 231

Query: 349 EANKILMKKIEDDQFLDLMTVK-TEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIII 407
           + ++IL  +      LD M ++  ++ S  K  Y IY+ + +     +E+  +A +RII+
Sbjct: 232 QVSQILRGR------LDEMGIRCVDLNSRPKHLYGIYQKMQRRNKEFHEIYDLAAMRIIV 285

Query: 408 KPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLY 467
           +              + CY  L +VH  + PIP   KDYI  PKPN YQSLHT +I F  
Sbjct: 286 ETN------------EGCYRALAVVHDAFRPIPGRFKDYIGLPKPNRYQSLHTGVIGFHG 333

Query: 468 ESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIA 527
                +EVQIRT EM  IAE GIAAH+             +  G S   +    ++    
Sbjct: 334 RP---IEVQIRTLEMHRIAEYGIAAHWK-----------YKETGTSDPTQIGADDD---- 375

Query: 528 LRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYA 587
            + +WL  + EWQ +      + E+++++  +L    V+VFTP G++  L + AT +D+A
Sbjct: 376 -KFTWLRQLLEWQNDL---KDAHEYIESVKDNLFDDDVYVFTPDGDVIPLSRDATPIDFA 431

Query: 588 YMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
           Y IHTEIGN     ++NG        L N ++VEIIT
Sbjct: 432 YRIHTEIGNHCAGVRINGQWRVLDTPLKNGDIVEIIT 468


>gi|381393451|ref|ZP_09919174.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
           [Glaciecola punicea DSM 14233 = ACAM 611]
 gi|379331009|dbj|GAB54307.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
           [Glaciecola punicea DSM 14233 = ACAM 611]
          Length = 707

 Score =  326 bits (836), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 198/502 (39%), Positives = 284/502 (56%), Gaps = 64/502 (12%)

Query: 130 LWEDLRPTIS-YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
           L+E L   IS YLS  +++ VR + +LA +AH+GQ R SG+P+I HPV V+ IL ++ LD
Sbjct: 3   LFEGLEKKISAYLSQQQVDYVRASYILARDAHEGQTRSSGDPYITHPVAVSSILADMRLD 62

Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
            E+I A LLHD +EDT   + E +   FG TV  +VEG   VSKL KLK      S Q+ 
Sbjct: 63  HETIMAALLHDVIEDTEY-SKEDLSLAFGETVAELVEG---VSKLDKLKFS----SKQEA 114

Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
           +A++ R+M +AM +++RVI++KL+DR HNMRTL  + P K+  IA ETL++++PLA  LG
Sbjct: 115 QAENFRKMLMAMVKDIRVILIKLSDRTHNMRTLGSLRPEKRRRIALETLEIYSPLAHRLG 174

Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
           +Y IK+ELE+L F       Y  +K  V       ++ +E   + L  +++         
Sbjct: 175 IYDIKNELEDLGFQAMYPMRYRALKSAVNQARGNRKEIIERTQQDLSNRLKK------YN 228

Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
           +   ++   K  YSIY  +     S NEV  I   RII+                 CY V
Sbjct: 229 INGRVQGREKHLYSIYSKMRSKELSFNEVMDIYGFRIIVDSVDN------------CYRV 276

Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTL-----IPFLYESMFRLEVQIRTEEMD 483
           LG +HGI+ PI    KDYIA P+ NGYQSLHT+L     IP        +EVQIRTEEMD
Sbjct: 277 LGAIHGIYKPIENRFKDYIAIPRSNGYQSLHTSLKGPHGIP--------VEVQIRTEEMD 328

Query: 484 LIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRIS-WLNAIREWQEE 542
            +A++GIAAH+           H + NG           + N  LR++ W+ ++ E Q+ 
Sbjct: 329 HMADKGIAAHW-----------HYKENGE---------QDNNSQLRVNQWMQSLVELQQ- 367

Query: 543 FVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAK 602
                TS EF++T+  DL    ++VF+P+G+I  LP GAT VD+AY +H+ +G+  V A+
Sbjct: 368 --NASTSVEFIETVKSDLFPDEIYVFSPKGKIIELPTGATAVDFAYAVHSGVGDTCVGAR 425

Query: 603 VNGNLVSPTHVLANAEVVEIIT 624
           V+    S +  L N + VEIIT
Sbjct: 426 VDHRNYSLSAPLENGQSVEIIT 447


>gi|87300813|ref|ZP_01083655.1| metal dependent phosphohydrolase [Synechococcus sp. WH 5701]
 gi|87284684|gb|EAQ76636.1| metal dependent phosphohydrolase [Synechococcus sp. WH 5701]
          Length = 779

 Score =  326 bits (835), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 202/518 (38%), Positives = 285/518 (55%), Gaps = 61/518 (11%)

Query: 115 PSVSSDAFKEDSPERLWEDLRPTISYLSPNELE--------LVRRALMLAFEAHDGQKRR 166
           P  + D +  + PE  W  LR  I ++ P E E        L+  A   AF+ HDGQ R 
Sbjct: 33  PIRTPDDYGLNLPE--W--LRECIVHVPPGEGETCPTDPEALLASAFDFAFQLHDGQVRA 88

Query: 167 SGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEG 226
           +GEP+IIHPV VA +L ++      IAAG LHD VEDT+V T E +E  FGA VR +VEG
Sbjct: 89  TGEPYIIHPVAVADLLRDIGASAGVIAAGFLHDVVEDTDV-TPEELEVHFGAEVRALVEG 147

Query: 227 ETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPP 286
              V+KLG +   N      + +A++LR+MFLAM  ++RV++VKLADRLHNMRTL  + P
Sbjct: 148 ---VTKLGGIHFTNHT----EAQAENLRRMFLAMASDIRVVLVKLADRLHNMRTLGALKP 200

Query: 287 HKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKE 346
            KQ  IA ET +++APLA  LG+ + K ELE+L+F     E Y ++K++VA    + E+ 
Sbjct: 201 EKQQRIARETREIYAPLANRLGIGRFKWELEDLAFKILEPEAYGEIKQQVASKRSDREER 260

Query: 347 LEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRII 406
           L     +LM++++     D      E+    K  Y I+  +   + + +E+  +A LRI 
Sbjct: 261 LAATVALLMQRLQGAGLHD-----CEVTGRPKHLYGIWSKMQMQQKAFHEIFDVAALRI- 314

Query: 407 IKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFL 466
                      L    + CY  L +VH  + PIP   KDYI  PKPNGYQSLHT +I   
Sbjct: 315 -----------LTPNLEGCYRALAVVHDTFRPIPGRFKDYIGLPKPNGYQSLHTAVI--- 360

Query: 467 YESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANI 526
                 +EVQIRT EM  +AE GIAAH+  +             G SP        +A  
Sbjct: 361 -GRHRPIEVQIRTTEMHQVAEYGIAAHWKYK------------EGGSP-------ASAGA 400

Query: 527 ALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDY 586
           A R +WL  + +WQ++  G   S +++ +I  DL    VFVFTP+G++  L KG+T VD+
Sbjct: 401 AERFNWLRQLVDWQQDD-GGEDSSDYLASIKEDLFDEEVFVFTPQGDVVGLRKGSTAVDF 459

Query: 587 AYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
           A+ IH+E+GN     ++N  L      L N + V+IIT
Sbjct: 460 AFRIHSEVGNHCQGVRINDRLCPLATPLRNGDFVQIIT 497


>gi|428219731|ref|YP_007104196.1| (p)ppGpp synthetase I SpoT/RelA [Pseudanabaena sp. PCC 7367]
 gi|427991513|gb|AFY71768.1| (p)ppGpp synthetase I, SpoT/RelA [Pseudanabaena sp. PCC 7367]
          Length = 746

 Score =  326 bits (835), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 197/487 (40%), Positives = 279/487 (57%), Gaps = 50/487 (10%)

Query: 141 LSPNELE-LVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES-IAAGLLH 198
           + P + E ++ RAL  A E H+GQ R SGEP+I+HP+EVA IL +L    ++ I AG LH
Sbjct: 34  IDPEDPEAIICRALKFACELHEGQYRASGEPYILHPIEVATILRDLGGGSKAMIVAGFLH 93

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT V T   IE EFGA +  +VEG TK+SK    + K E        A++ R+MFL
Sbjct: 94  DVVEDTEV-TVADIEAEFGAEIAALVEGVTKLSKFN-FESKTER------AAENFRRMFL 145

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM +++RVI+VKLADRLHNMRTL H+P  KQ++IA ET+++FAPLA  LG+ QIK ELE+
Sbjct: 146 AMAQDIRVIVVKLADRLHNMRTLEHLPAPKQANIARETMEIFAPLANRLGIGQIKWELED 205

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
           LSF Y + + Y +++  V +  +  E+ L     IL  +IE      L     EI    K
Sbjct: 206 LSFKYIDKDAYQQMRSLVVENRRNREERLARVRDILRSRIEQ-----LGLTNFEISGRPK 260

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             Y IY+ +   +    E+  ++ +RII++ K            + CY VL +VH  + P
Sbjct: 261 HLYGIYQKMQVRQKKYEEIYDVSAIRIIVENK------------EACYRVLAVVHDCFRP 308

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           IP   KDYI  PKPN YQSLHT +I     +   LEVQIRT EM  IAE GIAAH+  + 
Sbjct: 309 IPGRFKDYIGLPKPNRYQSLHTVVIG---PNGRPLEVQIRTWEMHHIAEYGIAAHWKYKE 365

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
             +     ++ + +                  +WL  + EWQ E   +   +E++DT+  
Sbjct: 366 TNSSHQATSQEDEK-----------------FTWLRQLVEWQRELKDD---QEYIDTLKE 405

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           +L    V+VF+P+G++  LP+GAT VD+AY IHTE+GN    A VN  +V     L N +
Sbjct: 406 NLFDHEVYVFSPKGDVYCLPRGATAVDFAYRIHTELGNHCAGALVNEFMVPLDRKLQNGD 465

Query: 619 VVEIITY 625
           +V ++ +
Sbjct: 466 IVTVLRH 472


>gi|46580488|ref|YP_011296.1| GTP pyrophosphokinase [Desulfovibrio vulgaris str. Hildenborough]
 gi|387153786|ref|YP_005702722.1| (p)ppGpp synthetase I SpoT/RelA [Desulfovibrio vulgaris RCH1]
 gi|46449907|gb|AAS96556.1| GTP pyrophosphokinase [Desulfovibrio vulgaris str. Hildenborough]
 gi|311234230|gb|ADP87084.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfovibrio vulgaris RCH1]
          Length = 717

 Score =  326 bits (835), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 191/486 (39%), Positives = 289/486 (59%), Gaps = 64/486 (13%)

Query: 145 ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDT 204
           ++ L++RA + A   H GQ R SGEP++ HP+ VA +L E+  D  ++AAGLLHDTVEDT
Sbjct: 19  DISLIQRAYVYAAAGHAGQTRLSGEPYLSHPLAVADLLAEMHFDEATVAAGLLHDTVEDT 78

Query: 205 NVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEV 264
           +    E I+ EFG  V  IV+G TK+S++          S ++ +A+++R+M LAM+ ++
Sbjct: 79  DA-GIEDIDREFGEEVADIVDGVTKISQM-------TFDSKEEAQAENIRKMILAMSHDI 130

Query: 265 RVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYT 324
           RV++VKLADRLHNMRTL     HKQ SIA ETL ++APLA  LG+++IK ELE+L   YT
Sbjct: 131 RVLMVKLADRLHNMRTLDFQKSHKQQSIAQETLDIYAPLANRLGLHRIKLELEDLGLRYT 190

Query: 325 NAEDYAKVKRRVADLYKEHEKELEEANKI--LMKKIEDDQFLDLMTVKTEIRSVCKEPYS 382
             + +A++   +       E ++ E N I  ++ +I   + LD   ++ E+R   K   S
Sbjct: 191 KPDVFAQITDWL------DENQMVERNLIDKVIARIR--EVLDANGIEGEVRGRIKHKSS 242

Query: 383 IYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRA 442
           IYK + +   +++E++ I   R+I+            +  + CY VLGL+H  W P+   
Sbjct: 243 IYKKMTQQGLALDEMHDIIAFRVIV------------ADLRDCYAVLGLMHAQWKPVHGR 290

Query: 443 MKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHY----SGRV 498
            KDYI+ PK NGYQSLHTT+I    E   R+E+QIRT EM  +AE G+A+H+    +GRV
Sbjct: 291 FKDYISMPKANGYQSLHTTVIGPEGE---RIEIQIRTREMHRMAEHGVASHWLYKDAGRV 347

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                         +PR         ++A + +WL  I + Q+       S+EF+ ++  
Sbjct: 348 --------------NPR---------DVA-QFTWLREILDRQKH---EADSKEFMHSLRL 380

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           DL    V+VFTPRG++K LP+GAT +D+AY+IH+++G+    AKVNG LV     L + +
Sbjct: 381 DLFKDEVYVFTPRGDVKELPEGATPIDFAYLIHSQVGDHCAGAKVNGKLVPLGTPLVSGD 440

Query: 619 VVEIIT 624
            +E+IT
Sbjct: 441 TIEVIT 446


>gi|24371957|ref|NP_715999.1| bifunctional ppGpp phosphohydrolase/GTP diphosphokinase SpoT
           [Shewanella oneidensis MR-1]
 gi|24345803|gb|AAN53444.1| bifunctional ppGpp phosphohydrolase/GTP diphosphokinase SpoT
           [Shewanella oneidensis MR-1]
          Length = 701

 Score =  326 bits (835), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 198/503 (39%), Positives = 290/503 (57%), Gaps = 64/503 (12%)

Query: 130 LWEDLRPTIS-YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
           L+E L+ + S YL P ++EL+++A  +A +AH+GQ R SGEP+I HPV VARIL E+ LD
Sbjct: 3   LFEGLKESASGYLEPEQVELLKQAYQVARDAHEGQMRTSGEPYITHPVAVARILAEMRLD 62

Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
            E++ A LLHDT+EDT  VT E + E FG +V  +VEG   VSKL KLK +++    ++ 
Sbjct: 63  HETLMAALLHDTIEDT-YVTKEDLAERFGESVAELVEG---VSKLDKLKFRDK----KEA 114

Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
           +A++ R+M +AMT+++RVI++KLADR HNMRTL  + P K+  IA ETL+++AP+A  LG
Sbjct: 115 QAENFRKMMMAMTQDIRVILIKLADRTHNMRTLGALRPDKRRRIARETLEIYAPIANRLG 174

Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQF--LDL 366
           ++ IK+ELE+L F     + Y  ++ RV    KE  K      K L++ IE      L+ 
Sbjct: 175 IHNIKTELEDLGF-----QAYYPMRYRV---LKEVVKAARGNRKELIQGIEAAVLTRLND 226

Query: 367 MTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICY 426
             +K +++   K  YSIY  +        EV  I   R+I+                 CY
Sbjct: 227 AGIKGKVKGREKNLYSIYNKMQSKELQFQEVMDIYAFRVIV------------DSIDTCY 274

Query: 427 HVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTL-----IPFLYESMFRLEVQIRTEE 481
            VLG +HG++ P P   KDYIA PK NGYQSLHT+L     +P        +E+QIRTE+
Sbjct: 275 RVLGAMHGLYKPRPGRFKDYIAIPKANGYQSLHTSLFGPHGVP--------VEIQIRTED 326

Query: 482 MDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQE 541
           MD +A++G+AAH++            +    + +G T  +          W+ ++ E Q+
Sbjct: 327 MDQMADKGVAAHWA-----------YKGGAETGQGTTTQVRAR------KWMQSLLELQQ 369

Query: 542 EFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAA 601
                 TS EFV+ +  +L    ++VFTP G I  LP  AT VD+AY +HT++GN  V A
Sbjct: 370 ---SASTSFEFVENVKTELFPEEIYVFTPEGRILELPVNATAVDFAYEVHTDVGNTCVGA 426

Query: 602 KVNGNLVSPTHVLANAEVVEIIT 624
           +VN      +  L + + VEIIT
Sbjct: 427 RVNRQAYPLSQPLISGQTVEIIT 449


>gi|326201899|ref|ZP_08191769.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium papyrosolvens DSM
           2782]
 gi|325987694|gb|EGD48520.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium papyrosolvens DSM
           2782]
          Length = 726

 Score =  326 bits (835), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 191/485 (39%), Positives = 287/485 (59%), Gaps = 63/485 (12%)

Query: 146 LELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTN 205
            E++ +A  ++  AH GQ+R SGEP+IIHPVEVA IL E+ELD  ++ A LLHDT+EDT 
Sbjct: 21  FEMLEKAYSVSKAAHMGQQRISGEPYIIHPVEVAIILAEIELDCTALVAALLHDTIEDT- 79

Query: 206 VVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVR 265
             T+++++ +FG  V  +V+G   V+KLGK+    +    ++ + ++LR+MFLAM +++R
Sbjct: 80  TCTYDQLKAQFGQEVAELVDG---VTKLGKIPFTTK----EEQQVENLRKMFLAMAKDIR 132

Query: 266 VIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTN 325
           VI++KLADRLHNMRTL++M   KQ   A ETL+++APLA  LG+ +IK ELE++   Y +
Sbjct: 133 VIMIKLADRLHNMRTLNYMTQDKQLEKARETLEIYAPLAHRLGISKIKWELEDICLRYLD 192

Query: 326 AEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYK 385
            + Y  +  ++    K+ E  +      L +K       +L     +I    K  YSIY+
Sbjct: 193 PKGYYDLVEKINTKRKQREAYITIIIDTLREKTN-----ELRIENAQIDGRPKHFYSIYR 247

Query: 386 AVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKD 445
            ++K   +++++  +   RII+            +  + CY VLGLVH ++ P+P   KD
Sbjct: 248 KMVKQNKTLDQIYDLFAFRIIV------------NSVKDCYAVLGLVHELYKPMPGRFKD 295

Query: 446 YIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFV 500
           YIA PKPN YQSLHTTLI     PF        EVQIRT +M  +AE GIAAH+    + 
Sbjct: 296 YIAMPKPNMYQSLHTTLIGPEGQPF--------EVQIRTWDMHRVAEVGIAAHWK---YK 344

Query: 501 TGLVGHARPNGRSPRGKTVCLNNANIA-LRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
            G                  +NNA  +  + +WL  + EWQ++        EF++T+  D
Sbjct: 345 EG------------------INNAKDSDNKFAWLRQLLEWQKD---TRDESEFMETLKID 383

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           L    VFVFTP+G++ NLP G+T VD+AY IH+ IGNKM+ AK+NG +    + L N ++
Sbjct: 384 LFTDEVFVFTPKGDVINLPVGSTPVDFAYAIHSAIGNKMIGAKINGKMEPIDYKLKNGDI 443

Query: 620 VEIIT 624
           ++I+T
Sbjct: 444 IDILT 448


>gi|120602193|ref|YP_966593.1| (p)ppGpp synthetase I SpoT/RelA [Desulfovibrio vulgaris DP4]
 gi|120562422|gb|ABM28166.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfovibrio vulgaris DP4]
          Length = 717

 Score =  326 bits (835), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 191/486 (39%), Positives = 289/486 (59%), Gaps = 64/486 (13%)

Query: 145 ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDT 204
           ++ L++RA + A   H GQ R SGEP++ HP+ VA +L E+  D  ++AAGLLHDTVEDT
Sbjct: 19  DISLIQRAYVYAAAGHAGQTRLSGEPYLSHPLAVADLLAEMHFDEATVAAGLLHDTVEDT 78

Query: 205 NVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEV 264
           +    E I+ EFG  V  IV+G TK+S++          S ++ +A+++R+M LAM+ ++
Sbjct: 79  DA-GIEDIDREFGEEVADIVDGVTKISQM-------TFDSKEEAQAENIRKMILAMSHDI 130

Query: 265 RVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYT 324
           RV++VKLADRLHNMRTL     HKQ SIA ETL ++APLA  LG+++IK ELE+L   YT
Sbjct: 131 RVLMVKLADRLHNMRTLDFQKSHKQQSIAQETLDIYAPLANRLGLHRIKLELEDLGLRYT 190

Query: 325 NAEDYAKVKRRVADLYKEHEKELEEANKI--LMKKIEDDQFLDLMTVKTEIRSVCKEPYS 382
             + +A++   +       E ++ E N I  ++ +I   + LD   ++ E+R   K   S
Sbjct: 191 KPDVFAQITDWL------DENQMVERNLIDKVIARIR--EVLDANGIEGEVRGRIKHKSS 242

Query: 383 IYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRA 442
           IYK + +   +++E++ I   R+I+            +  + CY VLGL+H  W P+   
Sbjct: 243 IYKKMTQQGLALDEMHDIIAFRVIV------------ADLRDCYAVLGLMHAQWKPVHGR 290

Query: 443 MKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHY----SGRV 498
            KDYI+ PK NGYQSLHTT+I    E   R+E+QIRT EM  +AE G+A+H+    +GRV
Sbjct: 291 FKDYISMPKANGYQSLHTTVIGPEGE---RIEIQIRTREMHRMAEHGVASHWLYKDAGRV 347

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                         +PR         ++A + +WL  I + Q+       S+EF+ ++  
Sbjct: 348 --------------NPR---------DVA-QFTWLREILDRQKH---EADSKEFMHSLRL 380

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           DL    V+VFTPRG++K LP+GAT +D+AY+IH+++G+    AKVNG LV     L + +
Sbjct: 381 DLFKDEVYVFTPRGDVKELPEGATPIDFAYLIHSQVGDHCAGAKVNGKLVPLGTPLVSGD 440

Query: 619 VVEIIT 624
            +E+IT
Sbjct: 441 TIEVIT 446


>gi|406658950|ref|ZP_11067090.1| GTP diphosphokinase [Streptococcus iniae 9117]
 gi|405579165|gb|EKB53279.1| GTP diphosphokinase [Streptococcus iniae 9117]
          Length = 739

 Score =  326 bits (835), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 183/493 (37%), Positives = 289/493 (58%), Gaps = 51/493 (10%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
            Y+S ++   V+ AL  A  AH  Q R+SGEP+IIHP++VA IL +L LD  ++A G LH
Sbjct: 18  GYMSESDAAFVKFALNYATAAHYYQARKSGEPYIIHPIQVAGILADLHLDAVTVACGFLH 77

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT++ T   IE +FG  VR I++G   V+KLGK++ K+    +    A++ R+M +
Sbjct: 78  DVVEDTDI-TLADIETDFGKDVRDIIDG---VTKLGKVEYKSHEEQL----AENHRKMLM 129

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM++++RVI+VKLADRLHNMRTL H+   KQ  I+ ET++++APLA  LG+ +IK ELE+
Sbjct: 130 AMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELED 189

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEE-ANKILMKKIEDDQFLDLMTVKTEIRSVC 377
           LSF Y N  ++ ++   + +  +E E  ++E  +KI+    E   + D+      I    
Sbjct: 190 LSFRYLNETEFYRISHLMTEKRREREALVDEIVDKIMTYTNEQGLYGDVYGRPKHI---- 245

Query: 378 KEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWT 437
              YSIY+ +   +   +++  +  +R +++             Q   Y ++G +H +W 
Sbjct: 246 ---YSIYRKMRDKKKRFDQIFDLIAIRCVME------------TQSDVYAMVGYIHELWR 290

Query: 438 PIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGR 497
           P+P   KDYIA PK NGYQS+HTT    +Y     +E+QIRT+EM  +AE G+AAH++ +
Sbjct: 291 PMPGRFKDYIAAPKANGYQSIHTT----VYGPKGPIEIQIRTKEMHQVAEYGVAAHWAYK 346

Query: 498 VFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTIT 557
             + G V                 N  +  + ++W+N + E Q+    N  +++FV+++ 
Sbjct: 347 KGIKGKV-----------------NQDDQKVGMNWINELVELQD--ASNGDAKDFVNSVK 387

Query: 558 RDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANA 617
            ++   R++VFTP G ++ LPK +  +D+AY IHT++G K   AKVNG +V  T  L   
Sbjct: 388 EEIFSERIYVFTPTGAVQELPKESGPIDFAYAIHTQVGEKATGAKVNGRMVPLTAKLKTG 447

Query: 618 EVVEIITYNVSFS 630
           +VVEI+T   SF 
Sbjct: 448 DVVEIVTNPSSFG 460


>gi|427731593|ref|YP_007077830.1| RelA/SpoT family (p)ppGpp synthetase [Nostoc sp. PCC 7524]
 gi|427367512|gb|AFY50233.1| (p)ppGpp synthetase, RelA/SpoT family [Nostoc sp. PCC 7524]
          Length = 797

 Score =  326 bits (835), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 203/533 (38%), Positives = 300/533 (56%), Gaps = 55/533 (10%)

Query: 99  SSLLHVACKRWRLCLSPSVSSDAFKEDSPERLWEDLRPTISYLSPNELE-------LVRR 151
           +S+ H++      C+S    +       P+ L + LR T +  +  E +       L+ R
Sbjct: 33  ASIFHLSTDHLSYCMSSIAITSPTDLSLPDWLNKCLRDTSAKHNETEDDRRHSDNTLICR 92

Query: 152 ALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFER 211
           A   A++ H GQ R+SGE +I HPV VA +L +L      IAAG LHD VEDT+V T E 
Sbjct: 93  AFEFAYQLHKGQYRKSGELYISHPVAVAGLLRDLGGSPAMIAAGFLHDVVEDTDV-TIEE 151

Query: 212 IEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKL 271
           IE+ FG  VR++VEG TK+SK+   K K E+      +A++ R+MFLAM +++RVI+VKL
Sbjct: 152 IEQHFGPEVRQLVEGVTKLSKIN-FKSKTES------QAENFRRMFLAMAQDIRVIVVKL 204

Query: 272 ADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAK 331
           ADRLHNMRTL +M    +   A ET  +FAPLA  LG+++IK ELE+L+F Y   E + +
Sbjct: 205 ADRLHNMRTLQYMSEDSRRRSAQETRDIFAPLANRLGIWRIKWELEDLAFKYLEPEAFRQ 264

Query: 332 VKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSR 391
           +++ V++     E++L +A  IL ++++      L     +I    K  YSIY+ + + +
Sbjct: 265 IQQHVSEKRTAREEKLVKATTILQERLQQAGIRCL-----DISGRPKHLYSIYQKMQRQQ 319

Query: 392 GSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPK 451
              +E+  +A LRII++              + CY  L +VH  + PIP   KDYI  PK
Sbjct: 320 KEFHEIYDLAALRIIVQGN------------EECYRALAIVHDAFRPIPGRFKDYIGLPK 367

Query: 452 PNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNG 511
           PN YQSLHT +I         LEVQIRT EM  IAE GIAAH+  +   TG         
Sbjct: 368 PNRYQSLHTGVIGLTGRP---LEVQIRTMEMHRIAEYGIAAHWKYK--ETG--------- 413

Query: 512 RSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSRVFVFTPR 571
               G    L  ++   + +WL  + EWQ +      ++E++D++  +L    V+VFTP+
Sbjct: 414 ----GSHSQLTTSD--EKFTWLRQLLEWQSDM---KDAQEYLDSVKDNLFEDDVYVFTPK 464

Query: 572 GEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
           G++  L  G+T +D+AY IHTEIGN    A+VNG +V  +  L N ++V+IIT
Sbjct: 465 GDVVPLSPGSTTIDFAYRIHTEIGNHCAGARVNGRMVPLSTRLHNGDIVDIIT 517


>gi|345857932|ref|ZP_08810350.1| relA/SpoT family protein [Desulfosporosinus sp. OT]
 gi|344329019|gb|EGW40379.1| relA/SpoT family protein [Desulfosporosinus sp. OT]
          Length = 735

 Score =  326 bits (835), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 189/495 (38%), Positives = 290/495 (58%), Gaps = 46/495 (9%)

Query: 131 WEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDW 189
           + +LR  +    P   L +V +A   A  AH  Q R SGE +I+HP+EVA+IL ELE+D 
Sbjct: 3   FAELRVKLQKTFPQASLAIVDKAYQFAEVAHRNQLRNSGEDYILHPLEVAQILVELEMDE 62

Query: 190 ESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVK 249
            +IAA LLHD VEDT+    + IE+EFG+ +  +V+G   V+KLG+L+ K    S  + +
Sbjct: 63  ATIAAALLHDVVEDTDFTIVD-IEKEFGSEIALLVDG---VTKLGRLEYK----SKMEQQ 114

Query: 250 ADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGM 309
            ++LR+MFLAM +++RVI++KLADRLHNMRTL +    KQ  IA ETL++FAPLA  LG+
Sbjct: 115 VENLRKMFLAMAKDIRVILIKLADRLHNMRTLKYHSVQKQKEIAQETLEIFAPLANRLGI 174

Query: 310 YQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTV 369
           ++IK ELE+LSF Y   ++Y  +   +A   +E E  +   N+++++  E    L+ + +
Sbjct: 175 FRIKWELEDLSFRYLKPQEYYDLVEGIALKRREREAYI---NEVIVQMRER---LNEVEI 228

Query: 370 KTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVL 429
             EI    K  YSIY+ +      ++E+  +  +R++++                CY  L
Sbjct: 229 YAEIAGRPKHFYSIYRKMTTQHKELSEIYDLMAIRVVVE------------SVNDCYGAL 276

Query: 430 GLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERG 489
           G++H +W PIP   KDYIA PKPN YQSLHTTLI    E     E+QIRT +M+  +E G
Sbjct: 277 GIIHTMWKPIPGRFKDYIAMPKPNMYQSLHTTLIGVHAEP---FEIQIRTCDMNRTSEYG 333

Query: 490 IAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTS 549
           IAAH+             +  G    G        N   +++WL  + EWQ +   +  +
Sbjct: 334 IAAHWK-----------YKEGGNKEGGNKAA--EVNFDKKLAWLRQLLEWQHD---SRDA 377

Query: 550 REFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVS 609
            EF++++  DL    VFVFTP+G++  LP G+  +D+AY +HT++G++ + AK+N  +V 
Sbjct: 378 GEFMESLKIDLFADTVFVFTPKGDVVELPAGSCPIDFAYRVHTDVGHRCIGAKINARIVP 437

Query: 610 PTHVLANAEVVEIIT 624
               L N +++EI+T
Sbjct: 438 LDTKLNNGDILEILT 452


>gi|218281321|ref|ZP_03487809.1| hypothetical protein EUBIFOR_00374 [Eubacterium biforme DSM 3989]
 gi|218217506|gb|EEC91044.1| hypothetical protein EUBIFOR_00374 [Eubacterium biforme DSM 3989]
          Length = 734

 Score =  326 bits (835), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 190/486 (39%), Positives = 280/486 (57%), Gaps = 44/486 (9%)

Query: 143 PNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVE 202
           P  +EL+++A   A+E H GQ R+SGEP++IH ++VA  L  +    ++IAAGLLHDTVE
Sbjct: 23  PENIELIQKAYDFAYEHHKGQFRKSGEPYVIHVIQVANTLALMHCGPKTIAAGLLHDTVE 82

Query: 203 DTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTE 262
           D   VT + I E FG  +  +V+    V+K+G +K K+E    ++  A + R++F+AM +
Sbjct: 83  DCQGVTTDTITELFGQEIATLVDA---VTKIGAIKFKDE----EEYLASNHRKLFIAMAK 135

Query: 263 EVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFM 322
           ++RVI++KLADRLHNMRTL +M P KQ  IA ETL V+AP+A  LG+ +IK+ELE+LSF 
Sbjct: 136 DIRVILIKLADRLHNMRTLQYMRPEKQKKIARETLSVYAPIAHRLGISEIKNELEDLSFK 195

Query: 323 YTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYS 382
           Y + + Y ++K    DL K+ E +  E    ++  IE    +    ++  I    K  YS
Sbjct: 196 YLDYKKYEEIK----DLVKQRESDRNEQVHEMISDIE--SIMQEYNIQYRIFGRSKHFYS 249

Query: 383 IYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRA 442
           IYK ++       E+  +  +RI+      S V         CY +LG +H  + PIP  
Sbjct: 250 IYKKMVTKNKRFEEILDLLAIRIVTD----SVVH--------CYEILGYIHAKYRPIPGR 297

Query: 443 MKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTG 502
            KDYIA PK N YQSLHTT++   + ++F  E+QIRTEEMD IAERG+AAH+        
Sbjct: 298 FKDYIAMPKANMYQSLHTTIVEPEHGNIF--EIQIRTEEMDAIAERGVAAHWK------- 348

Query: 503 LVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLG 562
                    +  R  T       I  ++SW        +E   +    E+++ + +D+  
Sbjct: 349 --------YKENRNYTPEYEQKEIEDKLSWFRDFSMMTDE--ESEDPLEYMNVLQKDIFE 398

Query: 563 SRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEI 622
           + V+  TPRG++  LP G+  +D+AY IHTE+GNK V AKVNG +V     L   +VV+I
Sbjct: 399 ANVYCLTPRGKVIALPSGSCPIDFAYRIHTEVGNKTVGAKVNGAIVPLNTPLKTGDVVDI 458

Query: 623 ITYNVS 628
           +T N S
Sbjct: 459 LTNNNS 464


>gi|339010669|ref|ZP_08643239.1| GTP pyrophosphokinase [Brevibacillus laterosporus LMG 15441]
 gi|421875402|ref|ZP_16306994.1| GTP pyrophosphokinase [Brevibacillus laterosporus GI-9]
 gi|338772824|gb|EGP32357.1| GTP pyrophosphokinase [Brevibacillus laterosporus LMG 15441]
 gi|372455610|emb|CCF16543.1| GTP pyrophosphokinase [Brevibacillus laterosporus GI-9]
          Length = 727

 Score =  326 bits (835), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 189/492 (38%), Positives = 288/492 (58%), Gaps = 50/492 (10%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           SY+S  ++ ++ RA  LA +AH+GQ R+SG P+I+HP+ VA IL ++ +D  ++AAG LH
Sbjct: 14  SYMSSEDVTMLERAYDLARKAHEGQVRKSGVPYIMHPIAVAGILTDMHMDAVTVAAGFLH 73

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT++ T + + +EFG+ V  +V+G TK+ K+ K K K E        A++ R+M +
Sbjct: 74  DVVEDTDI-TLDDLRKEFGSEVAHLVDGVTKLEKI-KYKSKEEQ------LAENHRKMLV 125

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM +++RVI++KLADRLHNMRTL HM   KQ  I+ ETL++FAPLA  LG+  +K ELE+
Sbjct: 126 AMAQDIRVILIKLADRLHNMRTLRHMSEEKQREISDETLEIFAPLAHRLGIAFVKWELED 185

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
            +  Y N + Y ++   +     E E+ + EA  ++  K+ +      + ++ EI    K
Sbjct: 186 TALRYLNPQQYYRIVNLMQKKRTEREEYISEAKAMITDKLHE------LHIEAEIAGRPK 239

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIYK ++      NE+  +  LRII+            +  + CY VLG+VH +W P
Sbjct: 240 HIYSIYKKMVSQNKQFNEIYDLLALRIIV------------NDIRDCYAVLGIVHTLWKP 287

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PK N YQSLHTT+I    E    LEVQIRT +M   AE GIAAH++ + 
Sbjct: 288 MPGRFKDYIAMPKANMYQSLHTTVIGPKGEP---LEVQIRTWDMHRTAEIGIAAHWAYK- 343

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                           +G+       +   +I  L  I +  +E   N  ++EF++++ +
Sbjct: 344 --------------EGKGEV----QGSFEEKIGNLREIIQGGQEETPN--AQEFMESLKQ 383

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           DL    VFVFTP+G++  LPKG+  +D+AY IH+ +GN+ + AKVNG +V     L   +
Sbjct: 384 DLFSDTVFVFTPKGDVVELPKGSVPLDFAYRIHSAVGNRTIGAKVNGKIVPLDFALRTGD 443

Query: 619 VVEIITYNVSFS 630
           ++EI+T   S+ 
Sbjct: 444 IMEILTSKHSYG 455


>gi|405983984|ref|ZP_11042289.1| RelA/SpoT family protein [Slackia piriformis YIT 12062]
 gi|404388799|gb|EJZ83881.1| RelA/SpoT family protein [Slackia piriformis YIT 12062]
          Length = 788

 Score =  325 bits (834), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 193/488 (39%), Positives = 284/488 (58%), Gaps = 51/488 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  Y++ ++  L+ +A   A EAH  QKR+SGEPFI HP+EVA IL +L +D +++ A L
Sbjct: 57  TAEYINEDDQALLEKAYRFASEAHKEQKRKSGEPFIAHPIEVALILADLRMDADTLCAAL 116

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHDTVEDT   T E + E F   V ++V+G TK++++       E  S+ D +A  +R+M
Sbjct: 117 LHDTVEDTPT-TVEEVSELFNPQVAQLVQGVTKITRI-------EVGSLTDEQAATIRKM 168

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
           F+AM++++RVI++KLADRLHNMRTLS +   ++   A ETL+++AP+A  LG+  IK EL
Sbjct: 169 FVAMSKDIRVIVIKLADRLHNMRTLSALKEDRRIFKARETLEIYAPIAHRLGIGSIKWEL 228

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y +   + ++ R VA+   E E+ L +  + L  +      L  + +   I   
Sbjct: 229 EDLSFYYLDPAKFGQISRMVAESRVERERYLADVIETLTGE------LTKVNITGHIAGR 282

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSIY+ + K     +E+  +  +R+I+K              + CY VLG VH +W
Sbjct: 283 PKHLYSIYQKMTKRGKGFSEIYDLIAVRVIVKT------------VKDCYSVLGAVHALW 330

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA PK N YQSLHTT+I     S   LEVQIRTEEM  ++E G+AAH+  
Sbjct: 331 HPMPGRFKDYIAMPKLNMYQSLHTTVIG---PSGRPLEVQIRTEEMHRMSEYGVAAHWRY 387

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +                 +G      +     +I+WL  + +WQEE      SREF+  +
Sbjct: 388 K----------------EKGSKA---DEAFDRQIAWLRQMVDWQEE---TKDSREFLSDL 425

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             DL  + VFVFTP G++ +L  G+T VD+AY +H+E+GN  V AKVNG +V  ++ L  
Sbjct: 426 KVDLAPTEVFVFTPAGDVMSLRSGSTPVDFAYNVHSEVGNHCVGAKVNGAIVPLSYELQM 485

Query: 617 AEVVEIIT 624
            + VEI+T
Sbjct: 486 GDRVEILT 493


>gi|327398631|ref|YP_004339500.1| (p)ppGpp synthetase I SpoT/RelA [Hippea maritima DSM 10411]
 gi|327181260|gb|AEA33441.1| (p)ppGpp synthetase I, SpoT/RelA [Hippea maritima DSM 10411]
          Length = 722

 Score =  325 bits (834), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 191/497 (38%), Positives = 289/497 (58%), Gaps = 53/497 (10%)

Query: 128 ERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELEL 187
           ++L+++ +  I  +  +E  L  +A + A++ H  QKR SGE +IIHP+ VARI+ +  L
Sbjct: 10  QKLYDEFKKEIK-IDFDEKRL-DKAFLYAYQKHKNQKRASGESYIIHPIHVARIVNQFYL 67

Query: 188 DWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQD 247
           D  S+ A LLHD +EDT   T + I   FG  V  +VE  TK+SK+ + K   EN     
Sbjct: 68  DENSLIAALLHDVLEDTEA-TVDDINNFFGDDVLFLVEALTKISKV-RYKSSEEN----- 120

Query: 248 VKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLL 307
            +AD+ R+M +AM  ++RVI++KLADRLHNMRT+ ++   KQ  IA ETL ++AP+A  L
Sbjct: 121 -QADNFRKMIVAMASDLRVILIKLADRLHNMRTICYLKEEKQKRIAKETLDIYAPIAHRL 179

Query: 308 GMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLM 367
           G+Y +KSELE+LSF Y   ++Y +++++V    KE  ++ +E  K +  KI+ D  ++  
Sbjct: 180 GIYWLKSELEDLSFKYLYPKEYEEIEKKV----KETIQKKQEVIKFVENKIKQD--MEEA 233

Query: 368 TVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYH 427
           ++K E+    K  YSIY  + + R   + +  +  +RII               ++ CY 
Sbjct: 234 SIKCEVSGRLKHLYSIYTKMQRKRVDFDGIYDLLAVRII------------TESEKDCYA 281

Query: 428 VLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAE 487
            LG++H  + P+P   KDYIA PK N YQSLHTT+      S   +E+QIRT+ M  IAE
Sbjct: 282 ALGIIHKNYKPLPGRFKDYIALPKQNMYQSLHTTVFG---PSDIVVEIQIRTKRMHEIAE 338

Query: 488 RGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNM 547
            GIAAHY                 +    K   ++  +   +  WL  + +WQ+E     
Sbjct: 339 EGIAAHY-----------------KYKENKVSIIDKHD--KQFLWLRHLLKWQKEV---R 376

Query: 548 TSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNL 607
             +EF++T+  DL    V+VFTP G++K LP+GAT VD+AY IHTE+GN+ V A+VNG +
Sbjct: 377 NPKEFLNTVKVDLFRGEVYVFTPAGDLKVLPRGATPVDFAYAIHTEVGNRCVGARVNGRI 436

Query: 608 VSPTHVLANAEVVEIIT 624
           V   + L+N ++VEI T
Sbjct: 437 VPLNYKLSNGDIVEIFT 453


>gi|297588487|ref|ZP_06947130.1| GTP diphosphokinase [Finegoldia magna ATCC 53516]
 gi|297573860|gb|EFH92581.1| GTP diphosphokinase [Finegoldia magna ATCC 53516]
          Length = 723

 Score =  325 bits (834), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 185/494 (37%), Positives = 285/494 (57%), Gaps = 52/494 (10%)

Query: 132 EDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWE 190
           + L  +I   +PN +++ + RA      AH+GQ R SGEP+ IHP+ VA+IL  L +D  
Sbjct: 9   QSLIKSIKSYNPNTDVDEITRAYGYMVRAHEGQFRNSGEPYAIHPMAVAKILASLNMDDA 68

Query: 191 SIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKA 250
           +I AGL HD VEDT + T+E +E  F   +  +V+G TK+ ++ K K K +N      +A
Sbjct: 69  TIIAGLFHDVVEDTEI-TYEDLEYLFSKEIADLVDGVTKLKQI-KFKTKKDN------QA 120

Query: 251 DDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMY 310
           ++L++M LAM +++RVII+KL+DRLHNMRTL +M   KQ   A E L+++APLA  LGM 
Sbjct: 121 ENLKKMILAMAKDIRVIIIKLSDRLHNMRTLEYMTREKQIEKANEVLEIYAPLAHRLGMS 180

Query: 311 QIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVK 370
            IK ELE+LS  Y     Y  +  ++ +  ++ E +++     ++++ +D+  L+   +K
Sbjct: 181 TIKWELEDLSLKYLEPNIYQDIVNKINETRQQRESQIQN----IIRQFQDE--LEKYNIK 234

Query: 371 TEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLG 430
            EI    K  +SIYK + K   +  E+  ++ +R+I+            + +  CY VLG
Sbjct: 235 AEIFGRPKSVFSIYKKMYKKHLAFEEIKDLSAIRVIV------------NKESECYDVLG 282

Query: 431 LVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGI 490
           + H  + PIP   KDYIATPKPN YQSLHTT+   L       E+QIRT EM   +E GI
Sbjct: 283 IAHRFFRPIPNTFKDYIATPKPNMYQSLHTTI---LAHDGRTYEIQIRTWEMHKTSEYGI 339

Query: 491 AAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSR 550
           AAH+  +   T        N +S               +++WL  I +WQ+++     S+
Sbjct: 340 AAHWKYKEGTT--------NKKSKYDS-----------KLAWLREIMDWQKDYTD---SK 377

Query: 551 EFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSP 610
           EF+D    +     VFV++P+G++ +LP G+T +D+AY +H+ +GNK V AKV+G +V  
Sbjct: 378 EFMDLFKEEFANDEVFVYSPKGDVMDLPSGSTPIDFAYKVHSAVGNKCVGAKVDGKIVPL 437

Query: 611 THVLANAEVVEIIT 624
           T+ L    VVEI+T
Sbjct: 438 TYKLKTGNVVEILT 451


>gi|22298127|ref|NP_681374.1| GTP pyrophosphokinase [Thermosynechococcus elongatus BP-1]
 gi|22294305|dbj|BAC08136.1| GTP pyrophosphokinase [Thermosynechococcus elongatus BP-1]
          Length = 752

 Score =  325 bits (834), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 195/481 (40%), Positives = 282/481 (58%), Gaps = 47/481 (9%)

Query: 144 NELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVED 203
           N  +LV RA   A++ H GQ+R SGEP+I HPV VA IL +L      +AAGLLHD +ED
Sbjct: 38  NGDDLVCRAFQFAYDLHQGQRRASGEPYIAHPVAVASILRDLGGGPALLAAGLLHDVIED 97

Query: 204 TNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEE 263
           T  VT E +   FGA VR++VEG TK+SK      K E       +A+  R+MFLAM ++
Sbjct: 98  T-AVTAEELAANFGAEVRQLVEGVTKLSKFN-FSSKTER------QAESFRRMFLAMAQD 149

Query: 264 VRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMY 323
           +RVI+VKLADRLHNMRTL ++P  ++ +IA ET  VFAPLA  LG+++IK ELE+L+F Y
Sbjct: 150 IRVIVVKLADRLHNMRTLEYLPEDRRRAIAQETRDVFAPLANRLGIWRIKWELEDLAFKY 209

Query: 324 TNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSI 383
              E Y +++  VA+     E +L++A +IL +++    F  L     EI    K  YSI
Sbjct: 210 LEPEAYRRIQELVAEKRANREAQLQQAIQILQERLSGMGFGYL-----EISGRPKHLYSI 264

Query: 384 YKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAM 443
           Y+ +++ +   +E+  IA +RI++  K              CY  L +VH  +  +P   
Sbjct: 265 YQKMMRQQKEFHEIYDIAGIRILVATK------------DECYRALAVVHDCFLSVPGRF 312

Query: 444 KDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGL 503
           KDYI+ PKPN YQSLHT +I         LEVQIRT  M  ++E GIAAH+  +      
Sbjct: 313 KDYISLPKPNQYQSLHTVVIGLGGRP---LEVQIRTLAMHHVSEYGIAAHWKYKE----- 364

Query: 504 VGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGS 563
            GH+ P   S + +           + +WL  + +WQ +      ++E++D+I  DL   
Sbjct: 365 TGHSLPQQWSVQDQ-----------KFTWLRQLLDWQNDL---KDAQEYLDSIRDDLFDK 410

Query: 564 RVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEII 623
            V+VFTP+G++  LP+GAT +D+AY IHT++GN    A+VNG +V     L N ++VE++
Sbjct: 411 EVYVFTPQGDVLALPQGATPLDFAYRIHTDVGNHCAGARVNGRMVPLDTPLRNGDIVEVL 470

Query: 624 T 624
           T
Sbjct: 471 T 471


>gi|186685647|ref|YP_001868843.1| (p)ppGpp synthetase I SpoT/RelA [Nostoc punctiforme PCC 73102]
 gi|186468099|gb|ACC83900.1| (p)ppGpp synthetase I, SpoT/RelA [Nostoc punctiforme PCC 73102]
          Length = 757

 Score =  325 bits (834), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 202/535 (37%), Positives = 296/535 (55%), Gaps = 66/535 (12%)

Query: 93  LGKLPRSSLLHVACKRW-RLCLSPSVSSDAFKEDSPERLWEDLRPTISYLSPNELELVRR 151
           +  L  +S + +A   W + CL  S +S+   ED       D R +       +  L+ R
Sbjct: 1   MSSLAINSSVDLAIPEWLKKCLKESSTSNGEVED-------DRRHS-------DAVLIGR 46

Query: 152 ALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFER 211
           A   A++ H GQ R+SGEP+I HP+ VA +L +L      IAAG LHD VEDT V T + 
Sbjct: 47  AFEFAYQLHQGQYRKSGEPYIAHPIAVADLLHDLGGSAAMIAAGFLHDVVEDTEV-TSQE 105

Query: 212 IEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKL 271
           IEE FGA VR++VEG TK+SK+     K E+      +A++ R+MFLAM +++RVI+VKL
Sbjct: 106 IEERFGAEVRQLVEGVTKLSKI-NFTSKTES------QAENFRRMFLAMAQDIRVIVVKL 158

Query: 272 ADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAK 331
           ADRLHNMRTL +M    +   A ET  +FAPLA  LG+++IK ELE+L+F Y   E + +
Sbjct: 159 ADRLHNMRTLQYMSEASRRRSAQETRDIFAPLANRLGIWRIKWELEDLAFKYLEPEAFRQ 218

Query: 332 VKRRVADLYKEHEKELEEANKILMKKIEDD--QFLDLMTVKTEIRSVCKEPYSIYKAVLK 389
           ++  V++     E++L  A  +L ++++    +F D       I    K  YSIY+ + +
Sbjct: 219 MQELVSEKRTAREEKLARATNMLQERLQQAGIRFQD-------ISGRPKHLYSIYQKMHR 271

Query: 390 SRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYIAT 449
            +   +E+  +A LRII++              + CY  L +VH  + PIP   KDYI  
Sbjct: 272 QQKEFHEIYDLAALRIIVQSN------------EECYRALAVVHDAFRPIPGRFKDYIGL 319

Query: 450 PKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARP 509
           PKPN YQSLHT +I         LEVQIRT EM  IAE GIAAH+  +      + H   
Sbjct: 320 PKPNRYQSLHTGVIGLTGRP---LEVQIRTIEMHHIAEYGIAAHWKYKETGGSSISHL-- 374

Query: 510 NGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSRVFVFT 569
                              + +WL  + EWQ +      ++E++D++  +L    V+VFT
Sbjct: 375 --------------TGTDDKFTWLRQLLEWQTDL---KDAQEYLDSVKDNLFEDDVYVFT 417

Query: 570 PRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
           P+G++  L  G+T VD+AY IHTE+GN    A+VNG +VS +  L N ++VE++T
Sbjct: 418 PKGDVVPLSPGSTTVDFAYRIHTEVGNHCSGARVNGRMVSLSTRLQNGDIVEVLT 472


>gi|443325885|ref|ZP_21054559.1| (p)ppGpp synthetase, RelA/SpoT family [Xenococcus sp. PCC 7305]
 gi|442794512|gb|ELS03925.1| (p)ppGpp synthetase, RelA/SpoT family [Xenococcus sp. PCC 7305]
          Length = 750

 Score =  325 bits (834), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 192/484 (39%), Positives = 280/484 (57%), Gaps = 50/484 (10%)

Query: 142 SPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTV 201
           S  +  L+ RA   A+  H+GQ R+SGEP+I HPV VA +L +L  D  +IAAG LHD V
Sbjct: 32  SNQDRNLICRAFNFAYNLHEGQYRKSGEPYIAHPVAVAGLLRDLGGDCVTIAAGFLHDIV 91

Query: 202 EDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMT 261
           EDT++ T E+IEE FG  VR +VEG TK+SK           S ++ +A++ R+MFLAM 
Sbjct: 92  EDTDI-TPEQIEEMFGFEVRCLVEGVTKLSKFN-------FSSTKERQAENFRRMFLAMA 143

Query: 262 EEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSF 321
           +++RVI+VKLADRLHNMRTL H+ P KQ  IA ET ++FAPLA  LG+ + K ELE+L F
Sbjct: 144 QDIRVIVVKLADRLHNMRTLEHLKPEKQRRIALETREIFAPLANRLGIGRFKWELEDLCF 203

Query: 322 MYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT-EIRSVCKEP 380
            Y   E Y +++  +++   + E  +E+    L  ++E+      + +K  E++   K  
Sbjct: 204 KYLEPEAYREIQSLISERRSDREARIEKVLDTLRSQMEN------LGIKILELKGRPKHL 257

Query: 381 YSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIP 440
           Y IY+ + + +    E+  IA +RII++              + CY  L +VH  + PIP
Sbjct: 258 YGIYQKMQRQQKKFEEIYDIAAIRIIVEAN------------EQCYRSLAVVHDAFKPIP 305

Query: 441 RAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFV 500
              KDYI  PKPN YQSLHTT++     +   LEVQIRT EM  IAE GIAAH+  +   
Sbjct: 306 GRFKDYIGLPKPNRYQSLHTTVVG---SNGRPLEVQIRTLEMHHIAEYGIAAHWKYK--- 359

Query: 501 TGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDL 560
                          G +    N++   + +WL  + EWQ++      ++E++D +  +L
Sbjct: 360 -------------ETGSSEAPVNSDDE-KFTWLRQLLEWQKDL---KDAQEYIDNLKDNL 402

Query: 561 LGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVV 620
               V+VFTP G++ +L +G+T VD+AY IHTE+GN M  A++N         L N ++V
Sbjct: 403 FEDDVYVFTPNGDVISLARGSTPVDFAYRIHTEVGNHMKGARINDRWSVLDRSLENGDIV 462

Query: 621 EIIT 624
           EIIT
Sbjct: 463 EIIT 466


>gi|55822133|ref|YP_140574.1| (p)ppGpp synthetase [Streptococcus thermophilus CNRZ1066]
 gi|55738118|gb|AAV61759.1| (p)ppGpp synthetase [Streptococcus thermophilus CNRZ1066]
          Length = 739

 Score =  325 bits (834), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 182/492 (36%), Positives = 292/492 (59%), Gaps = 49/492 (9%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           +Y+S ++L+LV +A   A +AH  Q R+SGEP+IIHP++VA IL +L LD  ++A G LH
Sbjct: 18  AYMSADDLKLVEKAWHYAPDAHSEQFRQSGEPYIIHPIQVAGILADLHLDAVTVACGFLH 77

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT   T + +E +FG  VR IV+G   V+KLGK++ K+    +    A++ R+M +
Sbjct: 78  DVVEDTEK-TLDDLEADFGTDVRNIVDG---VTKLGKVEYKSHEEQL----AENHRKMLM 129

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM++++RVI+VKLADRLHNMRTL H+   KQ  I+ ET++++APLA  LG+ +IK ELE+
Sbjct: 130 AMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELED 189

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
            +F Y N  ++ K+   + +  +E E  ++E    ++ KI+   +     +  ++    K
Sbjct: 190 TAFRYLNEVEFYKISHMMKEKRREREALVDE----IVYKIK--TYTAEQGLVGDVYGRPK 243

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSI++ +   +   +++  +  +R +++                 Y +LG +H +W P
Sbjct: 244 HIYSIFRKMRDKKKRFDQIYDLIAIRCVME------------THSDVYAMLGYIHELWRP 291

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PK NGYQS+HTT    +Y     +E+QIRT++M  +AE G+AAH++ + 
Sbjct: 292 MPGRFKDYIANPKSNGYQSIHTT----VYGPKGPIEIQIRTKKMHQVAEYGVAAHWAYKK 347

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
            + G V                 ++   AL ++W+  + E Q+    N  ++ FVD++  
Sbjct: 348 GIKGKV-----------------DSKESALGMNWIKDLVELQD--ASNGDAKGFVDSVKE 388

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           D+   R++VFTP+G+++ LPK +  +D+AY IHT++G K   AKVNG +V  T  L   +
Sbjct: 389 DIFSERIYVFTPKGDVQELPKDSGPIDFAYAIHTQVGEKATGAKVNGRMVPLTAKLKTGD 448

Query: 619 VVEIITYNVSFS 630
           VVEIIT   SF 
Sbjct: 449 VVEIITNAHSFG 460


>gi|350268673|ref|YP_004879981.1| GTP pyrophosphokinase [Oscillibacter valericigenes Sjm18-20]
 gi|348593515|dbj|BAK97475.1| GTP pyrophosphokinase [Oscillibacter valericigenes Sjm18-20]
          Length = 738

 Score =  325 bits (834), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 186/503 (36%), Positives = 293/503 (58%), Gaps = 70/503 (13%)

Query: 131 WEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE-LELD 188
           ++ L  T+   +P  +   +R A   A ++H+GQ R+SGEP+IIHP+ VA+I+ E L+LD
Sbjct: 7   YQKLEDTVRAYNPAADFVHIRAAFEYAEKSHNGQTRKSGEPYIIHPLAVAQIVAEELKLD 66

Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
            ESI A LLHD +EDT   T E + + F  TV  +VEG   VSKL +++   +    +D 
Sbjct: 67  SESIEAALLHDVIEDTPA-THEEVAKRFSPTVADLVEG---VSKLTRIQYATK----EDE 118

Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
           + ++LR+M +AM++++RVI++K++DRLHNMRT+ +  P KQ   + ET++++AP++  LG
Sbjct: 119 QMENLRKMLIAMSKDIRVILIKISDRLHNMRTMEYQSPEKQKQKSLETMEIYAPISHRLG 178

Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIED--DQFLDL 366
           M +IK ELE+LS  Y +   + ++  ++ +   E++          MK+ ++  DQ L  
Sbjct: 179 MQRIKWELEDLSLKYLDPVGFDEIVSKLDEKRTEYDD--------FMKRTQEQIDQRLTE 230

Query: 367 MTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICY 426
           M ++ ++    K PYSIY+ +     S++E+  +   R+++       VG        CY
Sbjct: 231 MDIRHKVYGRMKHPYSIYRKMFNQNKSLDEIFDLFAFRVVV-----DNVGD-------CY 278

Query: 427 HVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTL-----IPFLYESMFRLEVQIRTEE 481
           +VLG++H I+ PI    KDYI TPKPNGYQSLHTT+     IPF        EVQIRT+E
Sbjct: 279 NVLGVIHDIYKPILGRFKDYIGTPKPNGYQSLHTTVMGGDGIPF--------EVQIRTQE 330

Query: 482 MDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQE 541
           M  +AE G+AAH+             + NG+           A    +  W+  + E QE
Sbjct: 331 MHDVAEYGVAAHWK-----------YKQNGQG----------AGTEGKYEWVRRLLENQE 369

Query: 542 EFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAA 601
                  + E++ ++  D+    VFVFTP G+++NLP GAT +D+AY +H+ +GN M+ A
Sbjct: 370 ----GTDAEEYIRSLKVDMFADEVFVFTPGGDVQNLPAGATPIDFAYSVHSAVGNHMIGA 425

Query: 602 KVNGNLVSPTHVLANAEVVEIIT 624
           KVNG +V+    L N ++VEI+T
Sbjct: 426 KVNGRIVTYDFQLKNGDIVEILT 448


>gi|340758948|ref|ZP_08695526.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
           [Fusobacterium varium ATCC 27725]
 gi|251835906|gb|EES64444.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
           [Fusobacterium varium ATCC 27725]
          Length = 726

 Score =  325 bits (834), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 192/500 (38%), Positives = 292/500 (58%), Gaps = 66/500 (13%)

Query: 131 WEDLRPTISYLSPN----ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELE 186
           WE++   ++ ++ N    +LE ++ AL  A E H+GQ R+SGE +I+HPVEV +IL +++
Sbjct: 4   WEEI---VNQINKNNLKVDLEKIKLALYFAEECHEGQYRKSGEDYIMHPVEVTKILIDMK 60

Query: 187 LDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKL-GKLKCKNENHSV 245
           +D ++I AG+LHD VEDT ++T   I+  FG TV  +V+G TK+  L    K ++EN   
Sbjct: 61  MDTDTIVAGILHDIVEDT-LITLADIKYNFGDTVATLVDGVTKLKSLPNGTKKQDEN--- 116

Query: 246 QDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAK 305
                  +R+M LAM + +RVII+KL+DRLHNMRTL +M P KQ +I+ ETL ++APLA 
Sbjct: 117 -------IRKMILAMAQNLRVIIIKLSDRLHNMRTLKYMKPEKQIAISQETLDIYAPLAH 169

Query: 306 LLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLD 365
            LG+ +IK ELE+L   Y   E+Y  +K  +     E  + +E   K ++K + D     
Sbjct: 170 RLGIAKIKWELEDLCLRYLKPEEYEHIKSLIDSKRNERSEYVESFIKTIVKLLHD----- 224

Query: 366 LMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQIC 425
              +K  ++   K  YSIYK + +     +++  +  +RII+              +  C
Sbjct: 225 -TGIKGNVKGRFKHFYSIYKKMYEKGKEFDDIYDLMGVRIIV------------DTEGEC 271

Query: 426 YHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-PFLYESMFRLEVQIRTEEMDL 484
           Y+ LG++H  + P+P   KDYIA PK N YQS+HTT++ P   +  F +E+QIRTEEMD 
Sbjct: 272 YNTLGVIHSHFKPVPGRFKDYIAVPKSNNYQSIHTTIVGP---QGKF-IEIQIRTEEMDR 327

Query: 485 IAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFV 544
           +AE GIAAH+S            +   +  +G  V            WL  I E Q E  
Sbjct: 328 VAEEGIAAHWS-----------YKEKTKVTKGDQVY----------GWLRNILELQNEA- 365

Query: 545 GNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVN 604
               +++F+ ++T D++   VFVF+P+G+I  LP+G+T +D+A+ IHT+IG K V AKVN
Sbjct: 366 --EDTQDFIKSVTEDIMNETVFVFSPKGDILELPQGSTPLDFAFAIHTQIGCKCVGAKVN 423

Query: 605 GNLVSPTHVLANAEVVEIIT 624
           G +V+  + L N + VEIIT
Sbjct: 424 GKIVTLDYKLQNGDRVEIIT 443


>gi|169831064|ref|YP_001717046.1| (p)ppGpp synthetase I SpoT/RelA [Candidatus Desulforudis
           audaxviator MP104C]
 gi|169637908|gb|ACA59414.1| (p)ppGpp synthetase I, SpoT/RelA [Candidatus Desulforudis
           audaxviator MP104C]
          Length = 712

 Score =  325 bits (834), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 193/493 (39%), Positives = 283/493 (57%), Gaps = 53/493 (10%)

Query: 132 EDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWE 190
           E L   I   +P  ++  ++RA   A EAH  QKR SGE FI+HP+EVA+IL ELELD E
Sbjct: 4   ETLVERIRQYNPRVDVSFIQRAYEFAQEAHHNQKRISGEDFIVHPLEVAQILAELELDLE 63

Query: 191 SIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKA 250
           S+  GLLHD +ED  +     I EEFG  V  +V+G TK+ +L          S ++ +A
Sbjct: 64  SVVGGLLHDVIEDAGI-ELCVIREEFGDEVALLVDGVTKLRRLA-------YRSKEEQQA 115

Query: 251 DDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMY 310
           ++LR+M LAM ++VRVI++KLADRLHN+RTL +    KQ  IA ETL++FAPLA  LG+Y
Sbjct: 116 ENLRKMLLAMAKDVRVILIKLADRLHNLRTLQYHTVPKQREIAQETLEIFAPLAHRLGIY 175

Query: 311 QIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVK 370
           +IKSELE+++F +   E + ++ RR++      E  +    KIL +K      L  M + 
Sbjct: 176 RIKSELEDIAFRFREPERHEELTRRLSATRSVREGYIGGVIKILQEK------LGGMGIT 229

Query: 371 TEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLG 430
            +I+   K  YSIY+ +L     + E+  I  +RI+++              + CY  LG
Sbjct: 230 ADIQGRPKHLYSIYQKMLAQEKDLEEIFDILGIRILVESV------------KDCYATLG 277

Query: 431 LVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGI 490
           +VH +W P+P   KDYIA PK N YQSLHT+++    E    LE+Q+RT +M   AE GI
Sbjct: 278 VVHTLWKPVPGRFKDYIAMPKSNMYQSLHTSVVGPEGEV---LEIQVRTWDMHRTAEYGI 334

Query: 491 AAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSR 550
           AAH+                    R K+    +     +++WL  + EWQ E      +R
Sbjct: 335 AAHW--------------------RYKSGTRADPAFDEKLAWLRQLLEWQHEL---RDAR 371

Query: 551 EFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSP 610
           EF++T+  DL    V+VFTP G++  LP G+  +D+AY IHT++G++ + A+VNG LV  
Sbjct: 372 EFMETLKIDLFADSVYVFTPAGDVLELPAGSIPLDFAYRIHTDLGHRSIGARVNGKLVPL 431

Query: 611 THVLANAEVVEII 623
            + L   ++V+II
Sbjct: 432 NYQLKTGDIVDII 444


>gi|256851206|ref|ZP_05556595.1| ppGpp synthetase [Lactobacillus jensenii 27-2-CHN]
 gi|260660630|ref|ZP_05861545.1| ppGpp synthetase [Lactobacillus jensenii 115-3-CHN]
 gi|256616268|gb|EEU21456.1| ppGpp synthetase [Lactobacillus jensenii 27-2-CHN]
 gi|260548352|gb|EEX24327.1| ppGpp synthetase [Lactobacillus jensenii 115-3-CHN]
          Length = 747

 Score =  325 bits (834), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 191/485 (39%), Positives = 278/485 (57%), Gaps = 49/485 (10%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++  +L  V RA   A +AH GQKR SG+P+IIHP +VA  L  L LD +++AAG LHD
Sbjct: 22  YMNKEQLAFVERAYEYADKAHSGQKRASGQPYIIHPTQVAGTLANLGLDPDTVAAGFLHD 81

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
           TVEDT+V T + I+ EFG  V  IV+G TK++K        E  S ++  A++ R+M +A
Sbjct: 82  TVEDTSV-TNDDIKREFGEDVAFIVDGVTKLNKY-------EYKSHEEFLAENHRKMLIA 133

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M +++RVI+VKLADRLHNM TL H+ P KQ  IA+ETL ++APLA  LG+  IK ELE++
Sbjct: 134 MAKDLRVIMVKLADRLHNMHTLDHLRPDKQRRIASETLDIYAPLADRLGIGTIKWELEDM 193

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           S  Y N E Y  +  ++     E E  +E A   L         LD + +K +I    K 
Sbjct: 194 SLHYLNPEAYYNIVNQMNSKRSEREGYIETAIAYLK------DTLDSLHIKYDIYGRPKH 247

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YSIYK ++      +E+  +  +R+I++              + CY VLG VH  W P+
Sbjct: 248 IYSIYKKMVNKHKDFSEIFDLLAVRVIVQ------------NVRDCYAVLGAVHTKWKPM 295

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK NGYQSLHTT+I    ++   LE+QIRT++M  +AE G+AAH++ +  
Sbjct: 296 PGRFKDYIAVPKANGYQSLHTTIIGPGGKT---LEIQIRTQQMHEVAEYGVAAHWAYK-- 350

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
                          +G T  +   +   ++     I E ++E      + EF+ ++  D
Sbjct: 351 ---------------KGDTQAVEATSAGRKLDMFREILELKDE---TSNADEFMKSVKSD 392

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           +    V+VFTP+G++  L KG+  +D+AY IHT++G+  V AKVN  LV   + L N +V
Sbjct: 393 IFSDSVYVFTPKGDVYELAKGSVPLDFAYAIHTQVGSHAVGAKVNDKLVPLDYRLKNGDV 452

Query: 620 VEIIT 624
           V I+T
Sbjct: 453 VSILT 457


>gi|325290218|ref|YP_004266399.1| (p)ppGpp synthetase I SpoT/RelA [Syntrophobotulus glycolicus DSM
           8271]
 gi|324965619|gb|ADY56398.1| (p)ppGpp synthetase I, SpoT/RelA [Syntrophobotulus glycolicus DSM
           8271]
          Length = 718

 Score =  325 bits (833), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 188/479 (39%), Positives = 281/479 (58%), Gaps = 52/479 (10%)

Query: 149 VRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVT 208
           ++ A   A EAH GQ R SGE +I HP+EVA IL ELE+D  +I A  LHD  EDT    
Sbjct: 22  IKAAYRYAEEAHRGQLRVSGEDYIQHPLEVALILAELEMDDSTIIAAFLHDVAEDTER-K 80

Query: 209 FERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVII 268
            E I + FG  V  +V+G   V+KLGKL+ K    S  +V+ ++LR+MFLAM +++RVI+
Sbjct: 81  LEDIRKVFGEEVEGLVDG---VTKLGKLEYK----SKMEVQVENLRKMFLAMAKDIRVIL 133

Query: 269 VKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAED 328
           +KLADRLHNMRTL      KQ  IA ET++++APLA  LG+++IK ELE+LSF Y + ++
Sbjct: 134 IKLADRLHNMRTLRFKTEQKQKEIAQETIEIYAPLANRLGIFRIKWELEDLSFRYLHPQE 193

Query: 329 YAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAVL 388
           Y  +   +A   KE E+++ +  + L  ++ +      + ++ +I    K  YSIYK ++
Sbjct: 194 YYDLVEGIALKRKEREEQINKVIEHLKARLGE------VGIEADIAGRPKHFYSIYKKMI 247

Query: 389 KSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYIA 448
                ++E+  +  +R+I++                CY  LG++H +W PIP   KDYIA
Sbjct: 248 TQNKDLSEIYDLTAIRVIVE------------TVNDCYGALGVIHTLWKPIPGRFKDYIA 295

Query: 449 TPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHAR 508
            PKPN YQSLHTTLI  L E     E+QIRT EM   AE GIAAH+              
Sbjct: 296 MPKPNMYQSLHTTLIGTLGEP---FEIQIRTWEMHRTAEYGIAAHW-------------- 338

Query: 509 PNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSRVFVF 568
              +   GK V    +N+  ++SWL  + EWQ +   +  + +F++++  DL    VFVF
Sbjct: 339 ---KYKEGKKV---ESNLEQKLSWLRQLLEWQHD---SKDAGDFMESLKLDLFADEVFVF 389

Query: 569 TPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITYNV 627
           TP+G++  LP  +  +D+AY +HT++G++ + AK+NG +V     L N ++VEI+T  +
Sbjct: 390 TPKGDVVELPGDSCPIDFAYRVHTDVGHRCIGAKINGRIVPLDTKLKNGDIVEILTSKI 448


>gi|392957304|ref|ZP_10322828.1| (p)ppGpp synthetase I SpoT/RelA [Bacillus macauensis ZFHKF-1]
 gi|391876711|gb|EIT85307.1| (p)ppGpp synthetase I SpoT/RelA [Bacillus macauensis ZFHKF-1]
          Length = 726

 Score =  325 bits (833), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 192/499 (38%), Positives = 288/499 (57%), Gaps = 50/499 (10%)

Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
           E L+   SYL+  ++E +  A   A +AH+GQ R+SGEP+I HP+EVA IL  L++D  +
Sbjct: 5   EVLQNARSYLAEEDIEFLNDAYEYAKDAHEGQFRKSGEPYIQHPIEVAGILVGLQMDPVT 64

Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
           +AAG LHD VEDT + T + I + F   V  +V+G TK+ K+     + +       +A+
Sbjct: 65  VAAGFLHDVVEDTPI-TLKDISDRFNEEVAMLVDGVTKLKKIKFKSKEEQ-------QAE 116

Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
           + R+MF+AM +++R I++KLADRLHNMRTL HM   KQ   A ETL++FAPLA  LG+  
Sbjct: 117 NHRKMFVAMAQDIRCILIKLADRLHNMRTLKHMTKEKQIQKANETLEIFAPLAHRLGIST 176

Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
           IK ELE++S  Y N + Y     R+ +L K+   E E+  + +M +IE+   L  + +K 
Sbjct: 177 IKWELEDVSLRYLNPQQYY----RIVNLMKQKRAEREQYVQEVMNEIENR--LTEVQIKA 230

Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
           +I    K  YSIY+ ++K     NE+  +  +R+I+               + CY  LG+
Sbjct: 231 DISGRPKHIYSIYRKMVKQNKQFNEIYDLLAVRVIV------------HNIKDCYAALGI 278

Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
           +H  W P+P   KDYIA PK N YQSLHTT+I    +    LEVQIRT +M  +AE GIA
Sbjct: 279 IHTAWKPMPGRFKDYIAMPKANMYQSLHTTVIGPKGDP---LEVQIRTGDMHRVAEYGIA 335

Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
           AH++ +               + +  +    N     ++SW   I EWQ +      + E
Sbjct: 336 AHWAYK-------------EEAKKAPSDTFEN-----KLSWFREILEWQNDVA---DAEE 374

Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
           F++++  DL    VFVFTP+G++  LP G+  +D+AY IHTEIGN+ + AKVNG +V+  
Sbjct: 375 FMESLKVDLFSDMVFVFTPKGDVIELPAGSVPLDFAYRIHTEIGNRCIGAKVNGKMVTLD 434

Query: 612 HVLANAEVVEIITYNVSFS 630
           + L   +++EI+T   S+ 
Sbjct: 435 YKLKTGDIIEIMTSKHSYG 453


>gi|333394996|ref|ZP_08476815.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
           [Lactobacillus coryniformis subsp. coryniformis KCTC
           3167]
 gi|336392924|ref|ZP_08574323.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
           [Lactobacillus coryniformis subsp. torquens KCTC 3535]
          Length = 746

 Score =  325 bits (833), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 187/493 (37%), Positives = 281/493 (56%), Gaps = 49/493 (9%)

Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
           E ++   +Y++   +  V++AL  A   H  Q R+SGEP+I+HP++VA IL EL++D  +
Sbjct: 11  ESIKLVETYMNDEHVAFVKKALDFATYVHKEQFRQSGEPYIVHPIQVAAILAELKMDPAT 70

Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
           +A+G LHD VEDTN+ T   I+E FG  V  IV+G TK+SK+  +  K+E        A+
Sbjct: 71  VASGFLHDVVEDTNI-TLGDIQELFGHDVAVIVDGVTKLSKIKYVAHKDE-------LAE 122

Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
           + R+M LAM +++RV++VKLADRLHNMRTL H+ P KQ  IA ETL+++APLA  LG+ Q
Sbjct: 123 NHRKMILAMAKDLRVVMVKLADRLHNMRTLKHLRPEKQRRIANETLEIYAPLADRLGISQ 182

Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
            K ELE+ +  Y N + Y ++   +     + +  ++EA K +   + D        +K 
Sbjct: 183 FKWELEDTALRYLNPQQYYRIVHLMNSKRAQRQAYIDEAIKQIKASMTD------FNIKY 236

Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
           EI    K  YSIYK +        E+  +  +R+I+               + CY VLG 
Sbjct: 237 EIYGRPKHIYSIYKKMRDKHKQFEEIYDLLAIRVIV------------DTIKDCYAVLGA 284

Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
           +H  W P+P   KDYIA PK N YQSLHTT+I    +    LE+QIRTEEM  +AE G+A
Sbjct: 285 IHTKWKPMPGRFKDYIAMPKANMYQSLHTTVIGPKGQP---LEIQIRTEEMHQVAEYGVA 341

Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
           AH++ +                  GK   +   +   +I     I E  +E      + +
Sbjct: 342 AHWAYK-----------------EGKRDEVKYDSNGKKIDMFREILELGDE---TTNAAD 381

Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
           F++++  D+   RV+VFTP+G++  L +G+  +D+AY IHTE+GNK V AKVNG +V   
Sbjct: 382 FMESVKGDIFSDRVYVFTPKGDVYELSQGSGPLDFAYTIHTEVGNKTVGAKVNGKIVPLN 441

Query: 612 HVLANAEVVEIIT 624
           + L N ++V+I+T
Sbjct: 442 YQLKNGDIVDILT 454


>gi|359782489|ref|ZP_09285710.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
           [Pseudomonas psychrotolerans L19]
 gi|359369756|gb|EHK70326.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
           [Pseudomonas psychrotolerans L19]
          Length = 719

 Score =  325 bits (833), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 194/508 (38%), Positives = 282/508 (55%), Gaps = 60/508 (11%)

Query: 126 SPERLWEDLRPT---------ISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPV 176
           + E  + D+ PT           YL+P+++ LVRRA   A +AHDGQ+RRSGEP++ HP+
Sbjct: 2   AAEPAYGDVHPTGIDLLAERLADYLTPDQVNLVRRAYYYAEQAHDGQRRRSGEPYVTHPL 61

Query: 177 EVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKL 236
            VA IL ++ +D +S+ A +LHD +EDT +   E +  +FG TV  +V+G   VSKL ++
Sbjct: 62  AVANILADMHMDHQSLMAAMLHDVIEDTGIAK-EALAGQFGETVAELVDG---VSKLTQM 117

Query: 237 KCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATET 296
           K + +     + +A++ ++M +AM++++RVI+VKLADRLHNMRTL  MPP K   IA ET
Sbjct: 118 KFETK----AEAQAENFQKMTMAMSKDIRVILVKLADRLHNMRTLDAMPPDKSRRIAKET 173

Query: 297 LQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMK 356
           L+++AP+A  LGM+    E E+L F   +     +++R V        + L +  + L  
Sbjct: 174 LEIYAPIANRLGMHDFYVEFEDLGFRAMHPMRAERIQRAVKTARGNRREILGKIQESLAN 233

Query: 357 KIEDDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVG 416
            +  D  LD   V  E     K  +SIY+ +   R S NE+  +   RII+         
Sbjct: 234 CLARDG-LDGEVVGRE-----KHLHSIYQKMRGKRKSFNEIMDVYGFRIIV--------- 278

Query: 417 PLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQ 476
                   CY VLG VH ++ P P   KDYIA PK NGYQSLHTTL          +E+Q
Sbjct: 279 ---DKVDTCYRVLGAVHNLYKPFPGRFKDYIAIPKANGYQSLHTTLFGM---HGVPIEIQ 332

Query: 477 IRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAI 536
           IRT EM+ +A  GIAAH           G  +  G  PR        +++  R  W+  I
Sbjct: 333 IRTREMEEMANNGIAAH-----------GLYKAGGDEPRA-------SHLRAR-QWVKGI 373

Query: 537 REWQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGN 596
            E Q+   GN  S EF++ +  DL    V+VFTP+G I  LPKG+T VD+AY +HT++GN
Sbjct: 374 LELQQR-AGN--SLEFIENVKIDLFPDEVYVFTPKGRIMELPKGSTAVDFAYAVHTDVGN 430

Query: 597 KMVAAKVNGNLVSPTHVLANAEVVEIIT 624
             +A ++N  L   +  L + E VEI+T
Sbjct: 431 SCIACRINRRLAPLSQPLGSGETVEIVT 458


>gi|337750627|ref|YP_004644789.1| RelA protein [Paenibacillus mucilaginosus KNP414]
 gi|379723680|ref|YP_005315811.1| RelA protein [Paenibacillus mucilaginosus 3016]
 gi|386726431|ref|YP_006192757.1| RelA protein [Paenibacillus mucilaginosus K02]
 gi|336301816|gb|AEI44919.1| RelA [Paenibacillus mucilaginosus KNP414]
 gi|378572352|gb|AFC32662.1| RelA [Paenibacillus mucilaginosus 3016]
 gi|384093556|gb|AFH64992.1| RelA protein [Paenibacillus mucilaginosus K02]
          Length = 730

 Score =  325 bits (833), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 194/497 (39%), Positives = 282/497 (56%), Gaps = 51/497 (10%)

Query: 134 LRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIA 193
           L    SY+   +L+ +R A   A +AH GQ R+SGEP+I+HP+ VA IL  +++D  SI 
Sbjct: 7   LEKASSYVKEQDLKRIREAYEFADQAHFGQVRKSGEPYILHPLAVAEILVNMQMDTTSII 66

Query: 194 AGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDL 253
           A LLHD VEDT V + E + E+FGAT   IV+G TK+ K+ K K K E+ +      ++ 
Sbjct: 67  AALLHDVVEDTTV-SLETVHEKFGATCAMIVDGLTKLEKI-KFKSKEEHQN------ENY 118

Query: 254 RQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIK 313
           R+MF+AM +++RVI++KLADRLHNMRTL H     Q  IA ETL++F P+A  LG+  IK
Sbjct: 119 RKMFVAMAQDIRVILIKLADRLHNMRTLKHQSEEAQRRIADETLEIFCPIAHRLGISAIK 178

Query: 314 SELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEI 373
            E+E+++  Y N + Y     R+ +L ++   E E+    ++  +++   L  M +  +I
Sbjct: 179 WEMEDIALRYLNPQQYY----RIVNLMQKKRTEREQYINDVITNVKEK--LHEMGIDGDI 232

Query: 374 RSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVH 433
               K  YSIYK +       NE+  +  LRII+               + CY  LG++H
Sbjct: 233 SGRPKHIYSIYKKMTVRSKQFNEIYDLLALRIIV------------DNIKDCYATLGIIH 280

Query: 434 GIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAH 493
            +W P+P   KDYIA PKPN YQSLHTT+I    E    LEVQIRT EM   +E G+AAH
Sbjct: 281 TLWKPMPGRFKDYIAMPKPNMYQSLHTTVIGPKGEP---LEVQIRTFEMHRTSEYGVAAH 337

Query: 494 YSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFV 553
           ++ +       G   P G             +   ++ ++  I E Q E      ++EFV
Sbjct: 338 WAYK------EGTNVPTG-------------SYEDKMHFIREIIELQNE---AQDAQEFV 375

Query: 554 DTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHV 613
           +++  D     VFVFTP+GE+  LP G+  +D+AY IHTE+GN+ + AKVNG +V   H 
Sbjct: 376 ESLKMDFFSDLVFVFTPKGEVIELPVGSVPLDFAYRIHTEVGNRTIGAKVNGRIVPLDHR 435

Query: 614 LANAEVVEIITYNVSFS 630
           L   ++VEI+T   S+ 
Sbjct: 436 LKTGDIVEILTSKHSYG 452


>gi|373495922|ref|ZP_09586472.1| RelA/SpoT family protein [Fusobacterium sp. 12_1B]
 gi|404369252|ref|ZP_10974596.1| RelA/SpoT family protein [Fusobacterium ulcerans ATCC 49185]
 gi|313688538|gb|EFS25373.1| RelA/SpoT family protein [Fusobacterium ulcerans ATCC 49185]
 gi|371966563|gb|EHO84049.1| RelA/SpoT family protein [Fusobacterium sp. 12_1B]
          Length = 726

 Score =  325 bits (833), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 190/499 (38%), Positives = 291/499 (58%), Gaps = 64/499 (12%)

Query: 131 WEDLRPTISYLSPN----ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELE 186
           WE++   ++ ++ N    +LE ++ AL  A E H+GQ R+SGE +I+HPVEV +IL +++
Sbjct: 4   WEEI---VNQINKNNLKVDLEKIKLALYFAEECHEGQYRKSGEDYIMHPVEVTKILIDMK 60

Query: 187 LDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKL-GKLKCKNENHSV 245
           +D ++I AG+LHD VEDT ++T   I+  FG TV  +V+G TK+  L    K ++EN   
Sbjct: 61  MDTDTIVAGILHDIVEDT-LITLADIKYNFGDTVATLVDGVTKLKSLPNGTKKQDEN--- 116

Query: 246 QDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAK 305
                  +R+M LAM + +RVII+KL+DRLHNMRTL +M P KQ +I+ ETL ++APLA 
Sbjct: 117 -------IRKMILAMAQNLRVIIIKLSDRLHNMRTLKYMKPEKQIAISQETLDIYAPLAH 169

Query: 306 LLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLD 365
            LG+ +IK ELE+L   Y   E+Y  +K  +     E  + +E   K ++K + D     
Sbjct: 170 RLGIAKIKWELEDLCLRYLKPEEYEHIKSLIDSKRNERSEYVESFIKTIVKLLHD----- 224

Query: 366 LMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQIC 425
              +K  ++   K  YSIYK + +     +++  +  +RII+              +  C
Sbjct: 225 -TGIKGNVKGRFKHFYSIYKKMYEKGKEFDDIYDLMGVRIIV------------DTEGEC 271

Query: 426 YHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLI 485
           Y+ LG++H  + P+P   KDYIA PK N YQS+HTT++  L +    +E+QIRTE+MD +
Sbjct: 272 YNTLGVIHSHFRPVPGRFKDYIAVPKSNNYQSIHTTIVGPLGKF---IEIQIRTEDMDRV 328

Query: 486 AERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVG 545
           AE GIAAH+S            +   +  +G  V            WL  I E Q E   
Sbjct: 329 AEEGIAAHWS-----------YKEKTKVTKGDQVY----------GWLRNILELQNEA-- 365

Query: 546 NMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNG 605
              +++F+ ++T D++   VFVF+P+G+I  LP+G+T +D+A+ IHT+IG K V AKVNG
Sbjct: 366 -EDTQDFIKSVTEDIMNETVFVFSPKGDILELPQGSTPLDFAFAIHTQIGCKCVGAKVNG 424

Query: 606 NLVSPTHVLANAEVVEIIT 624
            +V+  + L N + VEIIT
Sbjct: 425 KIVTLDYKLQNGDRVEIIT 443


>gi|303230780|ref|ZP_07317527.1| GTP diphosphokinase [Veillonella atypica ACS-049-V-Sch6]
 gi|302514540|gb|EFL56535.1| GTP diphosphokinase [Veillonella atypica ACS-049-V-Sch6]
          Length = 746

 Score =  325 bits (833), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 183/486 (37%), Positives = 280/486 (57%), Gaps = 52/486 (10%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           SYL  +E + + +A  LA +AH+GQ R SGEP+I+HP+ VA IL  L++D  ++ A LLH
Sbjct: 32  SYLGDDECDQIMKAFTLADKAHEGQFRASGEPYIMHPLAVAEILAHLQIDHITLIAALLH 91

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT   T E IE+ FG+ V  +V+G TK+++        +  + +D + ++ R+M L
Sbjct: 92  DVVEDTEY-TKEDIEKLFGSEVAFLVDGVTKLNQF-------QYETKEDRQMENYRKMIL 143

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM ++VRV+++KL DRLHNMRTL HM   KQ  IA ETL++FAPLA  LG++ +K ELE+
Sbjct: 144 AMAKDVRVVVIKLGDRLHNMRTLKHMRSDKQKRIAKETLEIFAPLAHRLGIFNVKWELED 203

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
           LSF Y   + Y  +     D  K+  +  E+     M+++   + L    +K +I+   K
Sbjct: 204 LSFRYLEPDKYYDL----VDQMKQKRQAREDIVNDTMEQLT--KALGEAGIKADIKGRPK 257

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIYK + K    ++++  +  +R+I+   P             CY VLG+ H IW P
Sbjct: 258 HFYSIYKKMKKDNRDLSQIYDLLAVRVIVDTVPD------------CYAVLGIAHSIWKP 305

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYI+ PK N YQSLHTT+I  + +    +E+QIRT EM  ++E G+AAH+    
Sbjct: 306 LPYRFKDYISMPKSNMYQSLHTTVIGTMGQP---VEIQIRTWEMHRVSEYGVAAHW---- 358

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                        R   G      +     +++WL  + EWQ+        +E V+ +  
Sbjct: 359 -------------RYKEGNKGA--DKEFDQKVAWLRQVLEWQD----TSNPKELVNALKL 399

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           D+    VFVFTP+G++  LP G+  +D+AY +HT++G++ V AKVNG +V   + L N +
Sbjct: 400 DVFSGEVFVFTPKGDVVKLPIGSVPLDFAYRVHTDVGHRCVGAKVNGKIVPLDYTLQNGD 459

Query: 619 VVEIIT 624
           +V+IIT
Sbjct: 460 IVDIIT 465


>gi|403379224|ref|ZP_10921281.1| (p)ppGpp synthetase I SpoT/RelA [Paenibacillus sp. JC66]
          Length = 725

 Score =  325 bits (833), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 190/496 (38%), Positives = 285/496 (57%), Gaps = 51/496 (10%)

Query: 134 LRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIA 193
           L    +YL   +L  ++ A   A +AH GQ R+SGEP+I+HP+ VA I+  +++D  S+ 
Sbjct: 7   LEKASTYLKEKDLNKIKEAYEFAEKAHHGQVRKSGEPYILHPLAVADIVVNMQMDVTSVI 66

Query: 194 AGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDL 253
           A LLHD VEDT  V+ + ++E FG T   +V+G TK+ K+ K K K E  +      ++ 
Sbjct: 67  AALLHDVVEDT-TVSLDTLKEHFGETCAMLVDGLTKLEKI-KFKSKQEQQN------ENY 118

Query: 254 RQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIK 313
           R+MF+AM +++RVI++KLADRLHNMRTL +     Q  IA ETL++F P+A  LG+  IK
Sbjct: 119 RKMFVAMAQDIRVILIKLADRLHNMRTLKYQSEESQRRIADETLEIFCPIAHRLGISAIK 178

Query: 314 SELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEI 373
            E+E+++  Y N + Y     R+A+L ++   E E+  K ++ KI++   +  M ++++I
Sbjct: 179 WEMEDIALRYLNPQKYY----RIANLMQKKRTEREQYIKDVIIKIKEK--VSEMGIESDI 232

Query: 374 RSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVH 433
               K  YSIYK +       NE+  +  +R+I+               + CY  LG++H
Sbjct: 233 SGRPKHIYSIYKKMTARGKQFNEIYDLLAIRVIV------------DNIKDCYATLGIIH 280

Query: 434 GIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAH 493
            +W P+P   KDYIA PK N YQSLHTT+I    E    LEVQIRT EM   +E GIAAH
Sbjct: 281 TLWKPMPGRFKDYIAMPKTNMYQSLHTTVIGPKGEP---LEVQIRTWEMHRTSEYGIAAH 337

Query: 494 YSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFV 553
           ++ +       G A P+G             +   +++W   I E Q E      + EF+
Sbjct: 338 WAYK------EGSAVPSG-------------SFMEKMNWFREILELQNE---AKDASEFM 375

Query: 554 DTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHV 613
           +++  D     VFVFTP+GE+  LP G+  +D+AY IHTE+GN+ + AKVNG +V   H 
Sbjct: 376 ESLKMDFFSDLVFVFTPKGEVIELPAGSVPLDFAYRIHTEVGNRTIGAKVNGRIVPLDHK 435

Query: 614 LANAEVVEIITYNVSF 629
           L N ++VEI+T   S+
Sbjct: 436 LNNGDIVEILTSKHSY 451


>gi|375091649|ref|ZP_09737938.1| RelA/SpoT family protein [Helcococcus kunzii ATCC 51366]
 gi|374563171|gb|EHR34493.1| RelA/SpoT family protein [Helcococcus kunzii ATCC 51366]
          Length = 719

 Score =  325 bits (833), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 196/483 (40%), Positives = 279/483 (57%), Gaps = 54/483 (11%)

Query: 142 SPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTV 201
           +PN +EL+ +A  LA E H GQ R SGE +I+HPVEV+ IL  LELD E+I AGL+HD +
Sbjct: 15  NPN-IELITKAYNLAKEKHKGQVRNSGEEYIVHPVEVSIILSTLELDDETICAGLMHDVL 73

Query: 202 EDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMT 261
           EDT+  T E + +EFG  +  +V+G TK+  L K K K E       + + +R+M LAM 
Sbjct: 74  EDTDF-TREEMAQEFGDEITALVDGVTKLKNL-KYKTKEE------TQIESIRKMVLAMA 125

Query: 262 EEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSF 321
            ++RVII+KLADRLHNMRTL +    KQ S A ETL+++ PLA  LG+  IK ELE+L  
Sbjct: 126 NDIRVIIIKLADRLHNMRTLEYKDRDKQISTANETLEIYVPLAHRLGINSIKWELEDLCL 185

Query: 322 MYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPY 381
            Y +   Y  V +++     E EK +E+    LM+K+ D+  L  + +K  +    K  Y
Sbjct: 186 RYIDPISYYSVAQQIDQKRSEREKIIEK----LMQKLSDE--LKKIDIKFTMTGRPKGIY 239

Query: 382 SIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPR 441
           SIY  + K   SI+ +  +  +R+I+K                CY VLG+VH +W PIP 
Sbjct: 240 SIYNKMKKQDTSIDNIFDLIAIRVIVK------------DINQCYAVLGIVHNLWKPIPG 287

Query: 442 AMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVT 501
             KDYIA PKPN YQSLHTT+I    E     EVQIRTEEM   AE GIA+H+  +    
Sbjct: 288 RFKDYIAMPKPNFYQSLHTTVIG---EKGQIFEVQIRTEEMHKNAEFGIASHWQYK---- 340

Query: 502 GLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLL 561
                         GK      +N+  R++W+  + +W ++      + EF+D    DL 
Sbjct: 341 -------------EGKKKV---SNLDNRLNWIRQLIDWGKD----TGAYEFMDGFKGDLF 380

Query: 562 GSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVE 621
              V+VFTP+G++ +L KGAT +D+AY +H+E+G+K V AKVNG +    + L   ++V 
Sbjct: 381 NDEVYVFTPKGDVIDLKKGATPIDFAYRVHSEVGDKCVGAKVNGKIQPLDYKLKTGDIVT 440

Query: 622 IIT 624
           ++T
Sbjct: 441 VLT 443


>gi|339448283|ref|ZP_08651839.1| (p)ppGpp synthetase I SpoT/RelA [Lactobacillus fructivorans KCTC
           3543]
          Length = 741

 Score =  325 bits (833), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 201/508 (39%), Positives = 289/508 (56%), Gaps = 56/508 (11%)

Query: 123 KEDSPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARIL 182
           KE +P+ ++++      YL  N+++++++A   A  AH+ QKR SG+P+I HPVEVA IL
Sbjct: 5   KEWTPKEIFDEAS---EYLDKNDIQMIKKAYKFAKIAHEDQKRASGQPYINHPVEVAGIL 61

Query: 183 GELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNEN 242
            +L +D E+I AG LHD VEDT   T   I E FG  V  IV+G   VSKL K+K K+  
Sbjct: 62  TDLHMDAETITAGFLHDVVEDTGA-TIGDITELFGDHVSLIVDG---VSKLSKIKYKSSK 117

Query: 243 HSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAP 302
             +    A++ R++ LAM +++RV+IVKLADRLHNM TL  + P KQ  IA ETL ++AP
Sbjct: 118 EQL----AENHRKLLLAMCKDIRVMIVKLADRLHNMETLDALRPDKQKRIAQETLDIYAP 173

Query: 303 LAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQ 362
           LA  LG+  IK ELE+LS  Y   +DY ++   +     E    +  A    +KK++  Q
Sbjct: 174 LADRLGIGTIKWELEDLSLRYLKPDDYYEIVNLMNSKRNERVAYVNRA----VKKVQ--Q 227

Query: 363 FLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQ 422
            ++ + +K E+    K  YSIY+ +        E+  +  +R+I+K              
Sbjct: 228 AIEGLGIKGEVYGRPKHIYSIYRKMHDKHKDFKEIYDLLAVRVIVK------------SV 275

Query: 423 QICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEM 482
           + CY VLG +H  W P P   KDYIA PKPN YQSLHTT++         LE+QIRTEEM
Sbjct: 276 KDCYAVLGAIHTEWKPFPDRFKDYIAMPKPNMYQSLHTTVVG---PEGKPLEIQIRTEEM 332

Query: 483 DLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKT--VCLNNANIALRISWLNAIREWQ 540
             IAE G+AAH++ +                  GKT  V  N +N+ L +     I E Q
Sbjct: 333 HRIAEYGVAAHWAYK-----------------EGKTDEVESNKSNVQLNL--FKKIIEIQ 373

Query: 541 EEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVA 600
           EE   +  + +F+D++  DL   RV+ FTP G++  LPKG+  +D AY IHT++GN    
Sbjct: 374 EE---SENASDFMDSVQGDLFSDRVYAFTPSGDVIELPKGSIPIDMAYSIHTDVGNSTTG 430

Query: 601 AKVNGNLVSPTHVLANAEVVEIITYNVS 628
           A+VNG LV   + + N ++V+IIT + S
Sbjct: 431 ARVNGKLVPLDYEIKNGDIVDIITSSSS 458


>gi|330838608|ref|YP_004413188.1| (p)ppGpp synthetase I, SpoT/RelA [Selenomonas sputigena ATCC 35185]
 gi|329746372|gb|AEB99728.1| (p)ppGpp synthetase I, SpoT/RelA [Selenomonas sputigena ATCC 35185]
          Length = 740

 Score =  325 bits (833), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 189/484 (39%), Positives = 285/484 (58%), Gaps = 51/484 (10%)

Query: 142 SPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDT 200
            PN + +L+RRA  LA  AH GQKR SGE +IIHP+ VA+IL +L++D  +I+A +LHD 
Sbjct: 20  QPNADTDLIRRAYELADAAHKGQKRVSGEDYIIHPLAVAKILTDLQIDDITISAAILHDV 79

Query: 201 VEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAM 260
           VEDT   T + + E FG  V  +++G   V+KLG+++ K    S ++ + +  R+MFLAM
Sbjct: 80  VEDTTH-TLDEMRELFGDEVAMLIDG---VTKLGRIQYK----SKEEQQLESYRKMFLAM 131

Query: 261 TEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLS 320
            +++RVI++KLADRLHNMRTL +M   KQ  IA ET++++APLA  LG+  +K ELE+L 
Sbjct: 132 AKDIRVIMIKLADRLHNMRTLKYMREDKQKRIARETIEIYAPLANRLGISNVKWELEDLC 191

Query: 321 FMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEP 380
             Y + + Y  +   V    +E +  ++EA++ +++K+E+        +  EI+   K  
Sbjct: 192 LRYLDPKAYYDLVESVKQKRQERQAFIDEAHEQIVEKLEEAH------ITAEIQGRAKHF 245

Query: 381 YSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIP 440
           YSIYK + + +  I+E+  ++ LR+            L    + CY VLG++H +W P+P
Sbjct: 246 YSIYKKMKRDQKDISEIYDLSALRV------------LVDSVKDCYGVLGIIHAMWKPLP 293

Query: 441 RAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFV 500
              KDYIA PK NGYQSLHTT+I   Y     LE+QIRT  M  ++E G+AAH+  +   
Sbjct: 294 GRFKDYIAMPKSNGYQSLHTTVICRGYP----LEIQIRTFAMHKVSEYGVAAHWKYK--- 346

Query: 501 TGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDL 560
                          GK+V         ++SWL  +   Q E       RE+ + +  D+
Sbjct: 347 -------------EAGKSVGATR-EYDQKMSWLRQMVSLQHELD---DPREYFEALKVDV 389

Query: 561 LGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVV 620
               VFVFTP+G++ +LPKG+  +D+AY IHTE+G+  V AKVN  +V   + L N ++V
Sbjct: 390 FSDEVFVFTPKGDVVDLPKGSIPIDFAYRIHTEVGHHCVGAKVNSKIVPLEYKLKNGDIV 449

Query: 621 EIIT 624
            IIT
Sbjct: 450 SIIT 453


>gi|401679361|ref|ZP_10811292.1| GTP diphosphokinase [Veillonella sp. ACP1]
 gi|400219582|gb|EJO50446.1| GTP diphosphokinase [Veillonella sp. ACP1]
          Length = 746

 Score =  325 bits (833), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 183/486 (37%), Positives = 280/486 (57%), Gaps = 52/486 (10%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           SYL  +E + + +A  LA +AH+GQ R SGEP+I+HP+ VA IL  L++D  ++ A LLH
Sbjct: 32  SYLGDDECDQIMKAFTLADKAHEGQFRASGEPYIMHPLAVAEILAHLQIDHITLIAALLH 91

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT   T E IE+ FG+ V  +V+G TK+++        +  + +D + ++ R+M L
Sbjct: 92  DVVEDTEY-TKEDIEKLFGSEVAFLVDGVTKLNQF-------QYETKEDRQMENYRKMIL 143

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM ++VRV+++KL DRLHNMRTL HM   KQ  IA ETL++FAPLA  LG++ +K ELE+
Sbjct: 144 AMAKDVRVVVIKLGDRLHNMRTLKHMRSDKQKRIAKETLEIFAPLAHRLGIFNVKWELED 203

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
           LSF Y   + Y  +     D  K+  +  E+     M+++   + L    +K +I+   K
Sbjct: 204 LSFRYLEPDKYYDL----VDQMKQKRQAREDIVNDTMEQLT--KALGEAGIKADIKGRPK 257

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIYK + K    ++++  +  +R+I+   P             CY VLG+ H IW P
Sbjct: 258 HFYSIYKKMKKDNRDLSQIYDLLAVRVIVDTVPD------------CYAVLGIAHSIWKP 305

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYI+ PK N YQSLHTT+I  + +    +E+QIRT EM  ++E G+AAH+    
Sbjct: 306 LPYRFKDYISMPKSNMYQSLHTTVIGTMGQP---VEIQIRTWEMHRVSEYGVAAHW---- 358

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                        R   G      +     +++WL  + EWQ+        +E V+ +  
Sbjct: 359 -------------RYKEGNKGA--DKEFDQKVAWLRQVLEWQD----TSNPKELVNALKL 399

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           D+    VFVFTP+G++  LP G+  +D+AY +HT++G++ V AKVNG +V   + L N +
Sbjct: 400 DVFSGEVFVFTPKGDVVKLPIGSVPLDFAYRVHTDVGHRCVGAKVNGKIVPLDYTLQNGD 459

Query: 619 VVEIIT 624
           +V+IIT
Sbjct: 460 IVDIIT 465


>gi|366089230|ref|ZP_09455703.1| GTP pyrophosphokinase [Lactobacillus acidipiscis KCTC 13900]
          Length = 744

 Score =  325 bits (833), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 191/491 (38%), Positives = 283/491 (57%), Gaps = 59/491 (12%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
            Y++   + LV++A   A   H  Q R+SGEP++IH ++VA IL +L++D  ++ AG LH
Sbjct: 18  DYMNQEHVALVQKACDFATYVHKEQVRKSGEPYVIHSIQVAGILADLKMDPATVCAGFLH 77

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT V T   + E FG  V+ IV+G TK+SK+  +       S Q+ +A++ R++ L
Sbjct: 78  DVVEDTEV-TLGDVGELFGKDVQIIVDGVTKLSKIKYI-------SHQEAQAENHRKLLL 129

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM++++RVIIVKLADRLHNMRTLSH+ P KQ  IA ETL+++APLA  LG+  IK ELE+
Sbjct: 130 AMSQDLRVIIVKLADRLHNMRTLSHLRPDKQRRIANETLEIYAPLADRLGISTIKWELED 189

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
            S  Y N + Y ++   +     E  K +E+  + + K I D   LDL     EI    K
Sbjct: 190 TSLRYLNPQQYYRIVHLMNSKRTERLKYIEQVIEQIKKAIAD---LDL---NCEIYGRPK 243

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIY+ +        ++  +  +R+++K              + CY VLG +H  W P
Sbjct: 244 HIYSIYRKMRDQHKQFEQIYDLIAIRVVVKSI------------KDCYAVLGAIHTRWKP 291

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMDLIAERGIAAH 493
           +P   KDYIA PK N YQSLHTT++     PF        EVQIRTEEM  +AE GIAAH
Sbjct: 292 MPGRFKDYIAMPKANMYQSLHTTVLGPAGRPF--------EVQIRTEEMHQVAEYGIAAH 343

Query: 494 YSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFV 553
           ++ +                  GK   +N+ +   ++++   I E+Q E   +  + +F+
Sbjct: 344 WAYK-----------------EGKKDAVNSTDTGEKLNFFKEILEFQNE---SEDANDFM 383

Query: 554 DTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHV 613
           +++  DL   RV+VFTP+G++  LPKG+  +D AY IHTEIG+    AKVNG +V   + 
Sbjct: 384 ESVKGDLFSDRVYVFTPKGDVLELPKGSVPLDMAYSIHTEIGHHTTGAKVNGKIVPLNYQ 443

Query: 614 LANAEVVEIIT 624
           + N ++V+I+T
Sbjct: 444 IKNGDIVDILT 454


>gi|120600557|ref|YP_965131.1| bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis
           pyrophosphate 3'-pyrophosphohydrolase [Shewanella sp.
           W3-18-1]
 gi|146294715|ref|YP_001185139.1| bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis
           pyrophosphate 3'-pyrophosphohydrolase [Shewanella
           putrefaciens CN-32]
 gi|386315325|ref|YP_006011490.1| (p)ppGpp synthetase I SpoT/RelA [Shewanella putrefaciens 200]
 gi|120560650|gb|ABM26577.1| (p)ppGpp synthetase I, SpoT/RelA [Shewanella sp. W3-18-1]
 gi|145566405|gb|ABP77340.1| (p)ppGpp synthetase I, SpoT/RelA [Shewanella putrefaciens CN-32]
 gi|319427950|gb|ADV56024.1| (p)ppGpp synthetase I, SpoT/RelA [Shewanella putrefaciens 200]
          Length = 701

 Score =  325 bits (833), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 196/498 (39%), Positives = 289/498 (58%), Gaps = 54/498 (10%)

Query: 130 LWEDLRPTIS-YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
           L+E L+ + S YL P ++EL+++A  +A +AH+GQ R SGEP+I HPV VARIL E+ LD
Sbjct: 3   LFEGLKESASGYLEPEQVELLKQAYQIARDAHEGQMRTSGEPYITHPVAVARILAEMRLD 62

Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
            E++ A LLHDT+EDT+V T E + E FG +V  +VEG   VSKL KLK +++    ++ 
Sbjct: 63  HETLMAALLHDTIEDTHV-TKEDLAERFGESVAELVEG---VSKLDKLKFRDK----KEA 114

Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
           +A++ R+M +AMT+++RVI++KLADR HNMRTL  + P K+  IA ETL+++AP+A  LG
Sbjct: 115 QAENFRKMMMAMTQDIRVILIKLADRTHNMRTLGALRPDKRRRIARETLEIYAPIANRLG 174

Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQF--LDL 366
           ++ IK+ELE+L F     + Y  ++ RV    KE  K      K L++ IE   +  L+ 
Sbjct: 175 IHNIKTELEDLGF-----QAYYPMRYRV---LKEVVKAARGNRKELIQGIEAAVYTRLND 226

Query: 367 MTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICY 426
             +  +++   K  YSIY  +        EV  I   R+I+                 CY
Sbjct: 227 AGIPGKVKGREKNLYSIYNKMQSKELQFQEVMDIYAFRVIV------------DSIDTCY 274

Query: 427 HVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIA 486
            VLG +HG++ P P   KDYIA PK NGYQSLHT+L          +E+QIRTE+MD +A
Sbjct: 275 RVLGAMHGLYKPRPGRFKDYIAIPKANGYQSLHTSLFG---PHGVPVEIQIRTEDMDQMA 331

Query: 487 ERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGN 546
           ++G+AAH++            +    + +G T  +          W+ ++ E Q+     
Sbjct: 332 DKGVAAHWA-----------YKGGAEAGQGTTTQVRAR------KWMQSLLELQQ---SA 371

Query: 547 MTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGN 606
            TS EFV+ +  +L    ++VFTP G I  LP  AT VD+AY +HT++GN  V A+VN  
Sbjct: 372 STSFEFVENVKTELFPEEIYVFTPEGRILELPVNATAVDFAYEVHTDVGNTCVGARVNRQ 431

Query: 607 LVSPTHVLANAEVVEIIT 624
               +  L + + VEIIT
Sbjct: 432 AYPLSQPLISGQTVEIIT 449


>gi|260887825|ref|ZP_05899088.1| GTP diphosphokinase [Selenomonas sputigena ATCC 35185]
 gi|260862431|gb|EEX76931.1| GTP diphosphokinase [Selenomonas sputigena ATCC 35185]
          Length = 749

 Score =  325 bits (833), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 189/484 (39%), Positives = 285/484 (58%), Gaps = 51/484 (10%)

Query: 142 SPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDT 200
            PN + +L+RRA  LA  AH GQKR SGE +IIHP+ VA+IL +L++D  +I+A +LHD 
Sbjct: 29  QPNADTDLIRRAYELADAAHKGQKRVSGEDYIIHPLAVAKILTDLQIDDITISAAILHDV 88

Query: 201 VEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAM 260
           VEDT   T + + E FG  V  +++G   V+KLG+++ K    S ++ + +  R+MFLAM
Sbjct: 89  VEDT-THTLDEMRELFGDEVAMLIDG---VTKLGRIQYK----SKEEQQLESYRKMFLAM 140

Query: 261 TEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLS 320
            +++RVI++KLADRLHNMRTL +M   KQ  IA ET++++APLA  LG+  +K ELE+L 
Sbjct: 141 AKDIRVIMIKLADRLHNMRTLKYMREDKQKRIARETIEIYAPLANRLGISNVKWELEDLC 200

Query: 321 FMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEP 380
             Y + + Y  +   V    +E +  ++EA++ +++K+E+        +  EI+   K  
Sbjct: 201 LRYLDPKAYYDLVESVKQKRQERQAFIDEAHEQIVEKLEEAH------ITAEIQGRAKHF 254

Query: 381 YSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIP 440
           YSIYK + + +  I+E+  ++ LR+            L    + CY VLG++H +W P+P
Sbjct: 255 YSIYKKMKRDQKDISEIYDLSALRV------------LVDSVKDCYGVLGIIHAMWKPLP 302

Query: 441 RAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFV 500
              KDYIA PK NGYQSLHTT+I   Y     LE+QIRT  M  ++E G+AAH+  +   
Sbjct: 303 GRFKDYIAMPKSNGYQSLHTTVICRGYP----LEIQIRTFAMHKVSEYGVAAHWKYK--- 355

Query: 501 TGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDL 560
                          GK+V         ++SWL  +   Q E       RE+ + +  D+
Sbjct: 356 -------------EAGKSVGATR-EYDQKMSWLRQMVSLQHELD---DPREYFEALKVDV 398

Query: 561 LGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVV 620
               VFVFTP+G++ +LPKG+  +D+AY IHTE+G+  V AKVN  +V   + L N ++V
Sbjct: 399 FSDEVFVFTPKGDVVDLPKGSIPIDFAYRIHTEVGHHCVGAKVNSKIVPLEYKLKNGDIV 458

Query: 621 EIIT 624
            IIT
Sbjct: 459 SIIT 462


>gi|116328856|ref|YP_798576.1| GTP pyrophosphokinase [Leptospira borgpetersenii serovar
           Hardjo-bovis str. L550]
 gi|116330538|ref|YP_800256.1| GTP pyrophosphokinase [Leptospira borgpetersenii serovar
           Hardjo-bovis str. JB197]
 gi|116121600|gb|ABJ79643.1| GTP pyrophosphokinase [Leptospira borgpetersenii serovar
           Hardjo-bovis str. L550]
 gi|116124227|gb|ABJ75498.1| GTP pyrophosphokinase [Leptospira borgpetersenii serovar
           Hardjo-bovis str. JB197]
          Length = 674

 Score =  325 bits (832), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 193/499 (38%), Positives = 290/499 (58%), Gaps = 55/499 (11%)

Query: 126 SPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGEL 185
           + + L E +R T   L  +  E V++A  ++  AH GQ R SGEP+I+HP++V  IL EL
Sbjct: 9   TKDMLLEGVRET---LGESAYESVQKAYDVSERAHQGQFRLSGEPYIVHPLQVGFILYEL 65

Query: 186 ELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSV 245
            LD + I AGLLHD +EDT     + I + FG  +  +VEG TK+SK+       ++ S 
Sbjct: 66  GLDEKVICAGLLHDVIEDTQYSRDDMIRD-FGEDITDLVEGVTKISKI-------KSQSK 117

Query: 246 QDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAK 305
           +   A+++R++ +A  +++RVI++KLAD+ HNMRTLS   P KQ  IA ETL ++AP+A 
Sbjct: 118 ETEAAENIRKIIVATIKDIRVILIKLADKTHNMRTLSFQLPEKQKRIAQETLSLYAPIAG 177

Query: 306 LLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLD 365
            LG+Y+IKSELE+L+F   N E+Y +VK+ +     E E  +E    IL++++ + Q   
Sbjct: 178 RLGIYKIKSELEDLAFQVLNPEEYQEVKKNINSKKSEREGFIETLKIILLQRLSEIQ--- 234

Query: 366 LMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQIC 425
              ++ ++    K  YSIY+ +     + NE+  +  +RII             +  + C
Sbjct: 235 ---IEADVDGRAKHFYSIYRKMKLKEKTFNEIFDLRAIRII------------TNEVKDC 279

Query: 426 YHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLI 485
           Y VLG+VH +W P+P   KDYIATPK N YQSLHTT+I         LEVQIRT +M+ I
Sbjct: 280 YGVLGIVHTLWNPVPGRFKDYIATPKTNMYQSLHTTVIG---PDGKPLEVQIRTRDMNDI 336

Query: 486 AERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVG 545
           AE GIAAH+        +    +P+          L+  N+ +R  WL  +  WQ+    
Sbjct: 337 AEYGIAAHW--------MYKEGKPS----------LSEKNVKVR--WLELLSSWQD---S 373

Query: 546 NMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNG 605
            +  +EFV+ +  DL    VFVFTP+GEI  LPKGAT++D+A+ IHT++G K    ++NG
Sbjct: 374 ALDPKEFVEELKYDLHEDEVFVFTPKGEILQLPKGATILDFAFRIHTDVGLKAKGGRING 433

Query: 606 NLVSPTHVLANAEVVEIIT 624
            ++     L + + +EIIT
Sbjct: 434 RMLPLRTELRSGDQIEIIT 452


>gi|414079723|ref|YP_007001147.1| RelA/SpoT family protein [Anabaena sp. 90]
 gi|413973002|gb|AFW97090.1| RelA/SpoT family protein [Anabaena sp. 90]
          Length = 757

 Score =  325 bits (832), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 197/477 (41%), Positives = 272/477 (57%), Gaps = 47/477 (9%)

Query: 148 LVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVV 207
           L+ RA   A+E H GQ R+SGEP+I HPV VA IL EL      IAAGLLHD VEDT V 
Sbjct: 43  LICRAFQFAYELHGGQIRKSGEPYIAHPVAVAEILRELGGSPAMIAAGLLHDVVEDTEV- 101

Query: 208 TFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVI 267
           T E IE  FGA VR +VEG TK+SK+     K E+      +A++ R+MFLAM +++RVI
Sbjct: 102 TSEDIEARFGAEVRLLVEGVTKLSKIN-FTSKTES------QAENFRRMFLAMAQDIRVI 154

Query: 268 IVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAE 327
           +VKLADRLHNMRTL +M    +   A ET  +FAPLA  LG++QIK ELE+L+F Y   E
Sbjct: 155 VVKLADRLHNMRTLQYMSEASRQRSAQETRDIFAPLANRLGIWQIKWELEDLAFKYLEPE 214

Query: 328 DYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAV 387
            Y + ++ VA+     E++L +A   L +++     L       EI    K  YSIY+ +
Sbjct: 215 AYRETQQCVAEKRTAREEKLLKATDTLRRRL-----LKAGVNCLEISGRPKHLYSIYQKM 269

Query: 388 LKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYI 447
            + +   +E+  +A LRII++              + CY  L +VH  + PIP   KDYI
Sbjct: 270 QRQQKEFHEIYDLAALRIIVQ------------TNEECYRALAVVHDSFRPIPGRFKDYI 317

Query: 448 ATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHA 507
             PKPN YQSLHT +I         LEVQIRT EM  IAE GIAAH+             
Sbjct: 318 GLPKPNHYQSLHTGVIGLTGRP---LEVQIRTLEMHHIAEYGIAAHWK-----------Y 363

Query: 508 RPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSRVFV 567
           +  G S        +      + +WL  + +WQ +      ++E++D++  +L    V+V
Sbjct: 364 KETGGSENTPVTSTDE-----KFTWLRQLLDWQSDL---KDAQEYLDSVKDNLFEDDVYV 415

Query: 568 FTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
           FTP+G++  L  G+T +D+AY IHTE+GN    A+VNG +V  +  L N ++V+IIT
Sbjct: 416 FTPKGDVVPLSPGSTSIDFAYRIHTEVGNHCAGARVNGRIVPLSTRLHNGDIVDIIT 472


>gi|387130272|ref|YP_006293162.1| GTP pyrophosphokinase , (p)ppGpp synthetase II /
           Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
           [Methylophaga sp. JAM7]
 gi|386271561|gb|AFJ02475.1| GTP pyrophosphokinase , (p)ppGpp synthetase II /
           Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
           [Methylophaga sp. JAM7]
          Length = 723

 Score =  325 bits (832), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 197/518 (38%), Positives = 292/518 (56%), Gaps = 51/518 (9%)

Query: 111 LCLSPSVSS--DAFKEDSPERLWEDL-RPTISYLSPNELELVRRALMLAFEAHDGQKRRS 167
           +   P+V++  D  +E  P    +DL   T +YL P ++E +RRA   A   H+GQ RRS
Sbjct: 1   MSAKPTVATELDFIQESEPRLTIDDLCFATANYLEPAQVEAIRRAYHYADNCHEGQTRRS 60

Query: 168 GEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGE 227
           GE +I HP+ VA +L  + +D+E I AGLLHD +EDT     + +  EFG TV  +VEG 
Sbjct: 61  GERYITHPLAVAHVLAMMHMDYECIMAGLLHDVIEDTPAARAD-VAIEFGDTVAELVEG- 118

Query: 228 TKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPH 287
             V+KL K   +N N S  + +A++LR+M LAM+ ++RVIIVKLADRLHNMRTL H+ P 
Sbjct: 119 --VTKLAKAAFENSNQSPVEKQAENLRKMLLAMSRDIRVIIVKLADRLHNMRTLGHLRPD 176

Query: 288 KQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKEL 347
           K+  IA ETL+++AP+A+ LGM  ++ ELE+L F   +   Y  +   V       ++ +
Sbjct: 177 KRRRIANETLEIYAPIAQRLGMNLMRCELEDLGFHVLHPIRYRVLTDAVRKARGNRKEIV 236

Query: 348 EEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIII 407
            +    ++ ++E +       +  +I+   K  YSIYK +   + S +EV  +   RII+
Sbjct: 237 TQITSSILNRMEQE------GLTADIQGREKNLYSIYKKMWSKQLSFSEVMDVYAFRIIV 290

Query: 408 KPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-PFL 466
                            CY +LG+VH ++ P+    KDYIA PK NGYQSLHT L  P+ 
Sbjct: 291 DDVDA------------CYRMLGVVHNLYKPVQGKFKDYIAIPKANGYQSLHTVLFGPY- 337

Query: 467 YESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANI 526
                 +EVQIR+ +MD +AE G+AAH+   ++ +G  G          G T+    A  
Sbjct: 338 ---GVPIEVQIRSRDMDHLAEAGVAAHW---LYKSGESG----------GNTLADRKAR- 380

Query: 527 ALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDY 586
                WL  I E Q+    +  S EF++ +  DL    ++V TP+GEI  LP+GA+ VD+
Sbjct: 381 ----QWLQGILEMQK---SSGDSEEFLENLRMDLFPDEIYVSTPKGEILTLPRGASAVDF 433

Query: 587 AYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
           AY +H+++GN  VAA+V  N+V  +  L   + VEIIT
Sbjct: 434 AYAVHSDVGNSCVAARVGRNVVPLSSQLETGQSVEIIT 471


>gi|420144910|ref|ZP_14652389.1| GTP pyrophosphokinase [Lactobacillus coryniformis subsp.
           coryniformis CECT 5711]
 gi|398403467|gb|EJN56709.1| GTP pyrophosphokinase [Lactobacillus coryniformis subsp.
           coryniformis CECT 5711]
          Length = 746

 Score =  325 bits (832), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 187/493 (37%), Positives = 281/493 (56%), Gaps = 49/493 (9%)

Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
           E ++   +Y++   +  V++AL  A   H  Q R+SGEP+I+HP++VA IL EL++D  +
Sbjct: 11  ESIKLVETYMNDEHVAFVKKALDFANYVHKEQFRQSGEPYIVHPIQVAAILAELKMDPAT 70

Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
           +A+G LHD VEDTN+ T   I+E FG  V  IV+G TK+SK+  +  K+E        A+
Sbjct: 71  VASGFLHDVVEDTNI-TLGDIQELFGHDVAVIVDGVTKLSKIKYVAHKDE-------LAE 122

Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
           + R+M LAM +++RV++VKLADRLHNMRTL H+ P KQ  IA ETL+++APLA  LG+ Q
Sbjct: 123 NHRKMILAMAKDLRVVMVKLADRLHNMRTLKHLRPEKQRRIANETLEIYAPLADRLGISQ 182

Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
            K ELE+ +  Y N + Y ++   +     + +  ++EA K +   + D        +K 
Sbjct: 183 FKWELEDTALRYLNPQQYYRIVHLMNSKRAQRQAYIDEAIKQIKASMTD------FNIKY 236

Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
           EI    K  YSIYK +        E+  +  +R+I+               + CY VLG 
Sbjct: 237 EIYGRPKHIYSIYKKMRDKHKQFEEIYDLLAIRVIV------------DTIKDCYAVLGA 284

Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
           +H  W P+P   KDYIA PK N YQSLHTT+I    +    LE+QIRTEEM  +AE G+A
Sbjct: 285 IHTKWKPMPGRFKDYIAMPKANMYQSLHTTVIGPKGQP---LEIQIRTEEMHQVAEYGVA 341

Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
           AH++ +                  GK   +   +   +I     I E  +E      + +
Sbjct: 342 AHWAYK-----------------EGKHDEVKYDSNGKKIDMFREILELGDE---TTNAAD 381

Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
           F++++  D+   RV+VFTP+G++  L +G+  +D+AY IHTE+GNK V AKVNG +V   
Sbjct: 382 FMESVKGDIFSDRVYVFTPKGDVYELSQGSGPLDFAYTIHTEVGNKTVGAKVNGKIVPLN 441

Query: 612 HVLANAEVVEIIT 624
           + L N ++V+I+T
Sbjct: 442 YQLKNGDIVDILT 454


>gi|427706762|ref|YP_007049139.1| (p)ppGpp synthetase I SpoT/RelA [Nostoc sp. PCC 7107]
 gi|427359267|gb|AFY41989.1| (p)ppGpp synthetase I, SpoT/RelA [Nostoc sp. PCC 7107]
          Length = 756

 Score =  325 bits (832), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 193/481 (40%), Positives = 279/481 (58%), Gaps = 48/481 (9%)

Query: 144 NELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVED 203
           N+  L+ RA   A++ H GQ R+SGEP+I HPV VA +L +L      IAAG LHD VED
Sbjct: 38  NDASLICRAFTFAYQLHHGQFRKSGEPYICHPVAVAGLLRDLGGSPAMIAAGFLHDVVED 97

Query: 204 TNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEE 263
           T+V T E IEE FG+ VR +VEG TK+SK+   K K E+      +A++ R+MFLAM ++
Sbjct: 98  TDV-TIEEIEELFGSEVRLLVEGVTKLSKIN-FKSKTES------QAENFRRMFLAMAQD 149

Query: 264 VRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMY 323
           +RVI+VKLADRLHNMRTL +M    +   A ET  +FAPLA  LG++ IK ELE+L+F Y
Sbjct: 150 IRVIVVKLADRLHNMRTLQYMSEDSRRRSAQETRDIFAPLANRLGIWHIKWELEDLAFKY 209

Query: 324 TNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSI 383
              E + ++++ V++     E++L +A +IL +++       L     +I    K  YSI
Sbjct: 210 LEPEAFRQMQQHVSEKRTAREEKLAKATEILRERLPHAGIHCL-----DISGRPKHLYSI 264

Query: 384 YKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAM 443
           Y+ + + +   +E+  +A LRII++              + CY  L +VH  + PIP   
Sbjct: 265 YQKMQRQQKEFHEIYDLAALRIIVQTN------------EECYRALAVVHDAFRPIPGRF 312

Query: 444 KDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGL 503
           KDYI  PKPN YQSLHT +I         LE+QIRT EM  IAE GIAAH+         
Sbjct: 313 KDYIGLPKPNRYQSLHTGVIGLTGRP---LEIQIRTLEMHHIAEYGIAAHWK-------- 361

Query: 504 VGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGS 563
               +  G S    T          + +WL  + EWQ +      ++E++D++  +L   
Sbjct: 362 ---YKETGGSNSQFTASDE------KFTWLRQLLEWQSDL---KDAQEYLDSVKDNLFED 409

Query: 564 RVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEII 623
            V+VFTP+G++ +L  G+T +D+AY IHTE+GN    +KVNG +V  +  L N ++VEI+
Sbjct: 410 DVYVFTPKGDVVSLNPGSTSIDFAYRIHTEVGNHCSGSKVNGRIVPLSTRLHNGDIVEIL 469

Query: 624 T 624
           T
Sbjct: 470 T 470


>gi|418721778|ref|ZP_13280952.1| putative GTP diphosphokinase [Leptospira borgpetersenii str. UI
           09149]
 gi|421095922|ref|ZP_15556630.1| putative GTP diphosphokinase [Leptospira borgpetersenii str.
           200801926]
 gi|410361337|gb|EKP12382.1| putative GTP diphosphokinase [Leptospira borgpetersenii str.
           200801926]
 gi|410741822|gb|EKQ90575.1| putative GTP diphosphokinase [Leptospira borgpetersenii str. UI
           09149]
 gi|456889585|gb|EMG00473.1| putative GTP diphosphokinase [Leptospira borgpetersenii str.
           200701203]
          Length = 674

 Score =  325 bits (832), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 193/499 (38%), Positives = 290/499 (58%), Gaps = 55/499 (11%)

Query: 126 SPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGEL 185
           + + L E +R T   L  +  E V++A  ++  AH GQ R SGEP+I+HP++V  IL EL
Sbjct: 9   TKDMLLEGVRET---LGESAYESVQKAYDVSERAHQGQFRLSGEPYIVHPLQVGFILYEL 65

Query: 186 ELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSV 245
            LD + I AGLLHD +EDT     + I + FG  +  +VEG TK+SK+       ++ S 
Sbjct: 66  GLDEKVICAGLLHDVIEDTQYSRDDMIRD-FGEDITDLVEGVTKISKI-------KSQSK 117

Query: 246 QDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAK 305
           +   A+++R++ +A  +++RVI++KLAD+ HNMRTLS   P KQ  IA ETL ++AP+A 
Sbjct: 118 ETEAAENIRKIIVATIKDIRVILIKLADKTHNMRTLSFQLPEKQKRIAQETLSLYAPIAG 177

Query: 306 LLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLD 365
            LG+Y+IKSELE+L+F   N E+Y +VK+ +     E E  +E    IL++++ + Q   
Sbjct: 178 RLGIYKIKSELEDLAFQVLNPEEYQEVKKNINSKKSEREGFIETLKIILLQRLSEIQ--- 234

Query: 366 LMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQIC 425
              ++ ++    K  YSIY+ +     + NE+  +  +RII             +  + C
Sbjct: 235 ---IEADVDGRAKHFYSIYRKMKLKEKTFNEIFDLRAIRII------------TNEVKDC 279

Query: 426 YHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLI 485
           Y VLG+VH +W P+P   KDYIATPK N YQSLHTT+I         LEVQIRT +M+ I
Sbjct: 280 YGVLGIVHTLWNPVPGRFKDYIATPKTNMYQSLHTTVIG---PDGKPLEVQIRTRDMNDI 336

Query: 486 AERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVG 545
           AE GIAAH+        +    +P+          L+  N+ +R  WL  +  WQ+    
Sbjct: 337 AEYGIAAHW--------MYKEGKPS----------LSEKNVKVR--WLELLSSWQD---S 373

Query: 546 NMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNG 605
            +  +EFV+ +  DL    VFVFTP+GEI  LPKGAT++D+A+ IHT++G K    ++NG
Sbjct: 374 ALDPKEFVEELKYDLHEDEVFVFTPKGEILQLPKGATILDFAFRIHTDVGLKAKGGRING 433

Query: 606 NLVSPTHVLANAEVVEIIT 624
            ++     L + + +EIIT
Sbjct: 434 RMLPLRTELRSGDQIEIIT 452


>gi|312868044|ref|ZP_07728248.1| GTP diphosphokinase [Streptococcus parasanguinis F0405]
 gi|311096448|gb|EFQ54688.1| GTP diphosphokinase [Streptococcus parasanguinis F0405]
          Length = 739

 Score =  325 bits (832), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 189/494 (38%), Positives = 293/494 (59%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YLSP ++  V++AL+ A + H+GQ R+SGEP+IIHP++VA IL +L+LD  ++A G 
Sbjct: 16  TKKYLSPEDVAFVQKALVYAVDCHNGQFRQSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT+  T + +E EFG  VR IV+G   V+KLGK+K K+    +    A++ R+M
Sbjct: 76  LHDVVEDTDA-TLDDLEREFGHDVRVIVDG---VTKLGKVKYKSHEEQL----AENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM++++RVI+VKLADRLHNMRTL H+   KQ  I+ ET++++APLA  LG+  +K EL
Sbjct: 128 LMAMSQDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISSVKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y N  ++ K+   + +  +E E+ +EE    +      + +     +  +I   
Sbjct: 188 EDLSFRYLNETEFYKISHMMKEKRREREELVEEVVHKI------ETYAGERHLHGKIYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSIY+ +   +   +E+  +  +R I           L +P  + Y +LG +H +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFDEIYDLIAIRCI-----------LDTPSDV-YAMLGYIHELW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA  K NGYQS+HTT    +Y     +E QIRT+EM  +AE G+AAH++ 
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  + G V                 N+   A+ ++W+  + E Q++   +  ++EFV+ +
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---SGDAKEFVENV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             D+L   ++VFTP G +++LPK +  +D+AY IHT++G K + AKVNG +V     L  
Sbjct: 386 KEDILAEEIYVFTPDGTVRSLPKDSGPIDFAYEIHTKVGEKAIGAKVNGRMVPLNTKLRT 445

Query: 617 AEVVEIITYNVSFS 630
            + VEIIT   SF 
Sbjct: 446 GDQVEIITNANSFG 459


>gi|418735206|ref|ZP_13291618.1| putative GTP diphosphokinase [Leptospira borgpetersenii serovar
           Castellonis str. 200801910]
 gi|410749462|gb|EKR02354.1| putative GTP diphosphokinase [Leptospira borgpetersenii serovar
           Castellonis str. 200801910]
          Length = 674

 Score =  325 bits (832), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 193/499 (38%), Positives = 290/499 (58%), Gaps = 55/499 (11%)

Query: 126 SPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGEL 185
           + + L E +R T   L  +  E V++A  ++  AH GQ R SGEP+I+HP++V  IL EL
Sbjct: 9   TKDMLLEGVRET---LGESAYESVQKAYDVSERAHQGQFRLSGEPYIVHPLQVGFILYEL 65

Query: 186 ELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSV 245
            LD + I AGLLHD +EDT     + I + FG  +  +VEG TK+SK+       ++ S 
Sbjct: 66  GLDEKVICAGLLHDVIEDTQYSRDDMIRD-FGEDITDLVEGVTKISKI-------KSQSK 117

Query: 246 QDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAK 305
           +   A+++R++ +A  +++RVI++KLAD+ HNMRTLS   P KQ  IA ETL ++AP+A 
Sbjct: 118 ETEAAENIRKIIVATIKDIRVILIKLADKTHNMRTLSFQLPEKQKRIAQETLSLYAPIAG 177

Query: 306 LLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLD 365
            LG+Y+IKSELE+L+F   N E+Y +VK+ +     E E  +E    IL++++ + Q   
Sbjct: 178 RLGIYKIKSELEDLAFQVLNPEEYQEVKKNINSKKSEREGFIETLKIILLQRLSEIQ--- 234

Query: 366 LMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQIC 425
              ++ ++    K  YSIY+ +     + NE+  +  +RII             +  + C
Sbjct: 235 ---IEADVDGRAKHFYSIYRKMKLKEKTFNEIFDLRAIRII------------TNEVKDC 279

Query: 426 YHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLI 485
           Y VLG+VH +W P+P   KDYIATPK N YQSLHTT+I         LEVQIRT +M+ I
Sbjct: 280 YGVLGIVHTLWNPVPGRFKDYIATPKTNMYQSLHTTVIG---PDGKPLEVQIRTRDMNDI 336

Query: 486 AERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVG 545
           AE GIAAH+        +    +P+          L+  N+ +R  WL  +  WQ+    
Sbjct: 337 AEYGIAAHW--------MYKEGKPS----------LSEKNVKVR--WLELLSSWQD---S 373

Query: 546 NMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNG 605
            +  +EFV+ +  DL    VFVFTP+GEI  LPKGAT++D+A+ IHT++G K    ++NG
Sbjct: 374 ALDPKEFVEELKYDLHEDEVFVFTPKGEILQLPKGATILDFAFRIHTDVGLKAKGGRING 433

Query: 606 NLVSPTHVLANAEVVEIIT 624
            ++     L + + +EIIT
Sbjct: 434 RMLPLRTELRSGDQIEIIT 452


>gi|421766534|ref|ZP_16203306.1| GTP pyrophosphokinase , (p)ppGpp synthetase I [Lactococcus garvieae
           DCC43]
 gi|407625044|gb|EKF51769.1| GTP pyrophosphokinase , (p)ppGpp synthetase I [Lactococcus garvieae
           DCC43]
          Length = 741

 Score =  325 bits (832), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 185/491 (37%), Positives = 285/491 (58%), Gaps = 49/491 (9%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           +Y++  ++ LVR+AL  A  AH  Q R SGEP+IIHP++VA IL +L+LD  +++AG LH
Sbjct: 18  AYMNEKDILLVRKALKCASIAHAEQYRASGEPYIIHPIQVAGILAKLQLDAVTVSAGFLH 77

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDTN +  + +E  FG  +  IV+G   V+KLGK++ K+    +    A++ R+M +
Sbjct: 78  DVVEDTNFIQSDLVEL-FGEEIANIVDG---VTKLGKVEYKSHEEQL----AENHRKMLM 129

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM++++RVI+VKLADRLHNMRTL ++ P KQ  I++ET+ ++APLA  LG+  IK ELE+
Sbjct: 130 AMSKDIRVILVKLADRLHNMRTLKNLRPDKQKRISSETMAIYAPLAHRLGIGSIKWELED 189

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
           LSF Y N  ++ +++  + +     E  + E    L ++++D Q      V  EI    K
Sbjct: 190 LSFRYLNETEFYRIRGLMNEKRAARENLVSEVIDKLNERMKDAQ------VDAEIYGRPK 243

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIY+ +   +   +E+  +  +R       C     L       Y  LG +H +W P
Sbjct: 244 HIYSIYRKMHDKKKRFDEIYDLIAIR-------C-----LTDSTSDVYTTLGYIHDLWKP 291

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYIA PK NGYQS+HTT    +Y     +E QIRT EM  IAE G+AAH++ + 
Sbjct: 292 MPGRFKDYIANPKANGYQSVHTT----VYGPKGPMEFQIRTHEMHQIAEYGVAAHWAYK- 346

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                           +G+   ++   I+  ++W+N + E QE+     ++ EFV  +  
Sbjct: 347 ----------------QGRKAKVDVHEISETLNWINELVELQEQ--SGDSAEEFVKAVQE 388

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           D+LG +++VFTP G ++ LP G+  +D+AY IHT++G+    AK+N  +    +VL   +
Sbjct: 389 DILGDKIYVFTPTGAVQELPAGSGPIDFAYAIHTQVGDHATGAKINERMQPLNYVLKTGD 448

Query: 619 VVEIITYNVSF 629
            VEIIT   SF
Sbjct: 449 KVEIITSKTSF 459


>gi|75911185|ref|YP_325481.1| (p)ppGpp synthetase I [Anabaena variabilis ATCC 29413]
 gi|75704910|gb|ABA24586.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA [Anabaena
           variabilis ATCC 29413]
          Length = 751

 Score =  325 bits (832), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 200/505 (39%), Positives = 290/505 (57%), Gaps = 55/505 (10%)

Query: 127 PERLWEDLRPTISYLSPNELE-------LVRRALMLAFEAHDGQKRRSGEPFIIHPVEVA 179
           PE L + LR + +Y S  E +       L+ RA   A++ H GQ R+SGE +I HP+ VA
Sbjct: 15  PEWLKQCLRDSSTYGSKAENDRMCSDNTLICRAFDFAYQLHHGQYRKSGELYISHPIAVA 74

Query: 180 RILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCK 239
            +L +L      IAAG LHD VEDT+V T E IEE FG  V+++VEG TK+SK+   K K
Sbjct: 75  GLLRDLGGSPAMIAAGFLHDVVEDTDV-TIEEIEERFGPEVKQLVEGVTKLSKIN-FKSK 132

Query: 240 NENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQV 299
            E+      +A++ R+MFLAM +++RVI+VKLADRLHNMRTL +M    +   A ET  +
Sbjct: 133 TES------QAENFRRMFLAMAQDIRVIVVKLADRLHNMRTLQYMSEDSRRRSAQETRDI 186

Query: 300 FAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIE 359
           FAPLA  LG+++IK ELE+L+F     E + ++++ V++     E++L +A  IL  +++
Sbjct: 187 FAPLANRLGIWRIKWELEDLAFKNLEPEAFRQMQKYVSEKRDAREEKLAKATAILRDRLQ 246

Query: 360 DDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLC 419
                 L     +I    K  YSIY+ + + +   NE+  +A LRII++           
Sbjct: 247 QAGIRCL-----DISGRPKHLYSIYQKMHRQQKEFNEIYDLAALRIIVE----------- 290

Query: 420 SPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRT 479
              + CY  L +VH  + PIP   KDYI  PKPN YQSLHT +I         LEVQIRT
Sbjct: 291 -TNEECYRALAVVHDAFRPIPGRFKDYIGLPKPNRYQSLHTGVIGLTGRP---LEVQIRT 346

Query: 480 EEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREW 539
            EM  IAE GIAAH+  +   TG             G    +  ++   + +WL  + EW
Sbjct: 347 MEMHRIAEYGIAAHWKYK--ETG-------------GSNSLITTSD--EKFTWLRQLLEW 389

Query: 540 QEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMV 599
           Q +      ++E++D++  +L    V+VFTP+G++  L  GAT +D+AY IHTE+GN   
Sbjct: 390 QSDL---KDAQEYLDSVKDNLFEDDVYVFTPKGDVIPLSPGATTIDFAYHIHTEVGNHCA 446

Query: 600 AAKVNGNLVSPTHVLANAEVVEIIT 624
            A+VNG +V  +  L+N ++VEIIT
Sbjct: 447 GARVNGRMVPLSTRLSNGDIVEIIT 471


>gi|254507261|ref|ZP_05119397.1| RelA/SpoT family protein [Vibrio parahaemolyticus 16]
 gi|219549721|gb|EED26710.1| RelA/SpoT family protein [Vibrio parahaemolyticus 16]
          Length = 706

 Score =  325 bits (832), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 190/485 (39%), Positives = 282/485 (58%), Gaps = 50/485 (10%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           YL+  ++E +R++ ++A +AH+GQ R SGEP+IIHPV VARIL E+ LD E++ A LLHD
Sbjct: 14  YLTEPQIEALRQSYVVAKDAHEGQTRSSGEPYIIHPVAVARILAEMRLDIETLQAALLHD 73

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            +EDT V T E +EE+FG TV  +V+G   VSKL KLK ++     ++ +A++ R+M LA
Sbjct: 74  VIEDTEV-TKEELEEQFGNTVAELVDG---VSKLDKLKFRDR----KEAQAENFRKMVLA 125

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M +++RVI++KLADR HNMRTL  + P K+  IA ETL++++PLA  LG++ IK+ELE L
Sbjct: 126 MVQDIRVILIKLADRTHNMRTLGALRPDKKRRIARETLEIYSPLAHRLGIHNIKTELEEL 185

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
            F       Y +V + V    + + KE+     I     E +  L+ + +K  +    K 
Sbjct: 186 GFEALYPNRY-RVLKEVVKAARGNRKEM-----IQRIHTEIEGRLEEVGLKARVFGREKN 239

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            +SIY  +       + +  I   R++++                CY VLG VH ++ P 
Sbjct: 240 LFSIYNKMKTKEQRFHTIMDIYAFRVVVESADT------------CYRVLGQVHSLYKPR 287

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P  MKDYIA PK NGYQSLHT+++         +EVQIRTE+MD +A++G+AAH+S +  
Sbjct: 288 PGRMKDYIAVPKANGYQSLHTSMVG---PHGVPVEVQIRTEDMDQMADKGVAAHWSYK-- 342

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
                      G   R  T     A       W+ ++ E Q+   GN  S EF++ +  D
Sbjct: 343 -----------GNGDRSGTTAQVKAQ-----RWMQSLLELQQS-AGN--SFEFIENVKSD 383

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           L    ++VFTP+G I  LP GAT VD+AY +HT++GN  V A+V+ N    +  L N + 
Sbjct: 384 LFPDEIYVFTPKGRIVELPVGATAVDFAYAVHTDVGNTCVGARVDRNPYPLSKALKNGQT 443

Query: 620 VEIIT 624
           +EII+
Sbjct: 444 IEIIS 448


>gi|376261555|ref|YP_005148275.1| RelA/SpoT family (p)ppGpp synthetase [Clostridium sp. BNL1100]
 gi|373945549|gb|AEY66470.1| (p)ppGpp synthetase, RelA/SpoT family [Clostridium sp. BNL1100]
          Length = 726

 Score =  325 bits (832), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 191/485 (39%), Positives = 285/485 (58%), Gaps = 63/485 (12%)

Query: 146 LELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTN 205
            E++ +A  ++  AH GQ+R SGEP+IIHPVEVA IL E+ELD  ++ A LLHDT+EDT 
Sbjct: 21  FEMLEKAYSVSKAAHMGQQRISGEPYIIHPVEVAIILAEMELDCTALVAALLHDTIEDT- 79

Query: 206 VVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVR 265
             T+++++ +FG  V  +V+G   V+KLGK+    +    ++ + ++LR+MFLAM +++R
Sbjct: 80  TCTYDQLKAQFGQEVAELVDG---VTKLGKIPFTTK----EEQQVENLRKMFLAMAKDIR 132

Query: 266 VIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTN 325
           VI++KLADRLHNMRTL +M   KQ   A ETL+++APLA  LG+ +IK ELE++   Y +
Sbjct: 133 VIMIKLADRLHNMRTLKYMTQDKQLEKARETLEIYAPLAHRLGISKIKWELEDICLRYLD 192

Query: 326 AEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYK 385
            + Y  +  ++    K+ E  +      L +K       +L     +I    K  YSIY+
Sbjct: 193 PKGYYDLVEKINTKRKQREAYITIIIDTLREKTN-----ELGIENAQIDGRPKHFYSIYR 247

Query: 386 AVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKD 445
            ++K   ++ ++  +   RII+            +  + CY VLGLVH ++ P+P   KD
Sbjct: 248 KMVKQNKTLEQIYDLFAFRIIV------------NSVKDCYAVLGLVHELYKPMPGRFKD 295

Query: 446 YIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFV 500
           YIA PKPN YQSLHTTLI     PF        EVQIRT +M  +AE GIAAH+    + 
Sbjct: 296 YIAMPKPNMYQSLHTTLIGPEGQPF--------EVQIRTWDMHRVAEVGIAAHWK---YK 344

Query: 501 TGLVGHARPNGRSPRGKTVCLNNANIAL-RISWLNAIREWQEEFVGNMTSREFVDTITRD 559
            G                  +NNA  +  + +WL  + EWQ++        EF++T+  D
Sbjct: 345 EG------------------INNAKDSDNKFAWLRQLLEWQKD---TRDESEFMETLKID 383

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           L    VFVFTP+G++ NLP G+T VD+AY IH+ IGNKM+ AK+NG +    + L N ++
Sbjct: 384 LFTDEVFVFTPKGDVINLPVGSTPVDFAYAIHSAIGNKMIGAKINGKMEPIDYKLKNGDI 443

Query: 620 VEIIT 624
           ++I+T
Sbjct: 444 IDILT 448


>gi|302874945|ref|YP_003843578.1| (p)ppGpp synthetase I SpoT/RelA [Clostridium cellulovorans 743B]
 gi|307690437|ref|ZP_07632883.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium cellulovorans 743B]
 gi|302577802|gb|ADL51814.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium cellulovorans 743B]
          Length = 724

 Score =  325 bits (832), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 183/483 (37%), Positives = 277/483 (57%), Gaps = 61/483 (12%)

Query: 147 ELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNV 206
           EL+ +A     +AH+GQKR SGE + IHPVEVA+IL E+ +D  +I AGLLHD VEDT+ 
Sbjct: 19  ELIEKAYFFTEKAHEGQKRLSGEAYFIHPVEVAKILTEMGMDTATIVAGLLHDVVEDTDF 78

Query: 207 VTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRV 266
            T+E +  EF   V  +V+G TK+ K+          + ++ +AD++R+M LAMT+++RV
Sbjct: 79  -TYEDMVREFTKEVADLVDGVTKLDKI-------HYRTKEEAQADNIRKMLLAMTKDIRV 130

Query: 267 IIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNA 326
           I++KLADRLHNMRT+    P KQ  IA ET+ ++APLA  LG+++IK ELE+L   Y ++
Sbjct: 131 ILIKLADRLHNMRTIKFQSPDKQKEIAKETMDIYAPLAHRLGIFKIKWELEDLCLRYLHS 190

Query: 327 EDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKA 386
            +Y  + +++A    E E ++ E    L+        L    +  +I    K  YSIYK 
Sbjct: 191 TEYYDLVQKIASKRTERENDIREIIDELINN------LGASNIHADIDGRPKHFYSIYKK 244

Query: 387 VLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDY 446
           ++    S++++  +  +RI++K              + CY  LG+VH ++ PIP   KDY
Sbjct: 245 MVNKNKSLDQIFDLMAVRILVK------------TIKDCYATLGIVHTMYKPIPGRFKDY 292

Query: 447 IATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVT 501
           IA PKPN YQSLHTT+      PF        E+QIRT +M   AE GIAAH+       
Sbjct: 293 IAMPKPNMYQSLHTTVFAKNGKPF--------EIQIRTFDMHKTAEFGIAAHWK------ 338

Query: 502 GLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLL 561
                 +  G S        N+ +   ++ W+  + E+Q E      ++EF++    DL 
Sbjct: 339 -----YKEGGSS--------NDKDFDNKLGWIRDVIEYQTE---EANAKEFMENFKVDLF 382

Query: 562 GSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVE 621
              VFVFTP G++ NLP  +T +D+AY IHT++GN+ + AKVNG ++   + L   E+V+
Sbjct: 383 SDEVFVFTPAGKVINLPYESTPIDFAYRIHTDVGNRCIGAKVNGKIIPLDYKLKTGEIVD 442

Query: 622 IIT 624
           ++T
Sbjct: 443 VMT 445


>gi|119493798|ref|ZP_01624366.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA [Lyngbya
           sp. PCC 8106]
 gi|119452440|gb|EAW33628.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA [Lyngbya
           sp. PCC 8106]
          Length = 755

 Score =  325 bits (832), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 198/484 (40%), Positives = 280/484 (57%), Gaps = 51/484 (10%)

Query: 147 ELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNV 206
           E+V RA   A++ H+GQ R+SGEP+I HP+ VA +L  L  +   IAAG LHD +EDT V
Sbjct: 42  EIVCRAFEFAYKLHEGQYRKSGEPYINHPIAVAGLLRYLGSEGTVIAAGFLHDIIEDTEV 101

Query: 207 VTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRV 266
            T + +E  FG+ VR++VEG TK+SK      K E       +A++ R+MFLAM +++RV
Sbjct: 102 -TPDELESHFGSEVRQLVEGVTKLSKFN-FSNKTER------QAENFRRMFLAMAKDIRV 153

Query: 267 IIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNA 326
           I+VKLADRLHNMRTL  +P HK+ SIA ET ++FAPLA  LG+ + K ELE+LSF Y   
Sbjct: 154 IVVKLADRLHNMRTLEFLPDHKRRSIALETREIFAPLAHRLGIGRFKWELEDLSFKYLEP 213

Query: 327 EDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT-EIRSVCKEPYSIYK 385
           E Y +++  VAD     E++L E    L  ++E         +K+ E+    K  + IY+
Sbjct: 214 EAYREIQSLVADKRNIREEKLAEVADFLRTRLEK------AGIKSYEVNGRPKHLHGIYR 267

Query: 386 AVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKD 445
            +   +   +E+  +A LR+I++              + CY  L +VH  + PIP   KD
Sbjct: 268 KMHNHQKQFHEIYDLAALRVIVE------------TNEECYRTLAIVHDAFRPIPGRFKD 315

Query: 446 YIATPKPNGYQSLHTTLIPFLYESMFR-LEVQIRTEEMDLIAERGIAAHYSGRVFVTGLV 504
           YI  PKPN YQSLHT +I     S  R +EVQIRT EM  IAE GIAAH+  +   TG  
Sbjct: 316 YIGLPKPNRYQSLHTGVIG----STGRPIEVQIRTVEMHHIAEYGIAAHWKYK--ETGGS 369

Query: 505 GHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSR 564
            +A+               +N   + +WL  + EWQ +      + E++++I  +L    
Sbjct: 370 NYAKM--------------SNSDDKFTWLRQLLEWQNDL---KDANEYLESIKNNLFDED 412

Query: 565 VFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
           V+VFTP G++  L +GAT+VD+AY IHTEIGN    AKVN  +V    VL N +++EI+T
Sbjct: 413 VYVFTPEGDVMVLSQGATMVDFAYRIHTEIGNHCKGAKVNDRIVPLDTVLKNGDIIEILT 472

Query: 625 YNVS 628
              S
Sbjct: 473 QKSS 476


>gi|322390790|ref|ZP_08064300.1| GTP diphosphokinase [Streptococcus parasanguinis ATCC 903]
 gi|321142460|gb|EFX37928.1| GTP diphosphokinase [Streptococcus parasanguinis ATCC 903]
          Length = 739

 Score =  324 bits (831), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 189/494 (38%), Positives = 293/494 (59%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YLSP ++  V++AL+ A + H+GQ R+SGEP+IIHP++VA IL +L+LD  ++A G 
Sbjct: 16  TKKYLSPEDVAFVQKALVYAVDCHNGQFRQSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT+  T + +E EFG  VR IV+G   V+KLGK+K K+    +    A++ R+M
Sbjct: 76  LHDVVEDTDA-TLDDLEREFGHDVRVIVDG---VTKLGKVKYKSHEEQL----AENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM++++RVI+VKLADRLHNMRTL H+   KQ  I+ ET++++APLA  LG+  +K EL
Sbjct: 128 LMAMSQDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISSVKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y N  ++ K+   + +  +E E+ +EE    +      + +     +  +I   
Sbjct: 188 EDLSFRYLNETEFYKISHMMKEKRREREELVEEVVHKI------ETYAGERHLHGKIYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSIY+ +   +   +E+  +  +R I           L +P  + Y +LG +H +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFDEIYDLIAIRCI-----------LDTPSDV-YAMLGYIHELW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA  K NGYQS+HTT    +Y     +E QIRT+EM  +AE G+AAH++ 
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  + G V                 N+   A+ ++W+  + E Q++   +  ++EFV+ +
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---SGDAKEFVENV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             D+L   ++VFTP G +++LPK +  +D+AY IHT++G K + AKVNG +V     L  
Sbjct: 386 KEDILAEEIYVFTPDGTVRSLPKDSGPIDFAYEIHTKVGEKAIGAKVNGRMVPLNTKLRT 445

Query: 617 AEVVEIITYNVSFS 630
            + VEIIT   SF 
Sbjct: 446 GDQVEIITNANSFG 459


>gi|184155287|ref|YP_001843627.1| GTP pyrophosphokinase [Lactobacillus fermentum IFO 3956]
 gi|385812253|ref|YP_005848644.1| GTP pyrophosphokinase [Lactobacillus fermentum CECT 5716]
 gi|183226631|dbj|BAG27147.1| GTP pyrophosphokinase [Lactobacillus fermentum IFO 3956]
 gi|299783150|gb|ADJ41148.1| GTP pyrophosphokinase [Lactobacillus fermentum CECT 5716]
          Length = 744

 Score =  324 bits (831), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 190/504 (37%), Positives = 285/504 (56%), Gaps = 47/504 (9%)

Query: 126 SPERLWEDLRPTIS-YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
           + E   ED++  ++ Y++   + LV RA   A  AH GQ R+SGEP+IIHP++VA IL E
Sbjct: 4   TKELTHEDVKNMVAKYMNEEHVALVERAYHFAAVAHQGQVRKSGEPYIIHPIQVAGILAE 63

Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
           L++D E++ AG +HD VEDT   T + I+E FG T+  IV+G+TK+SK+     K +   
Sbjct: 64  LKMDPETVCAGYMHDLVEDTGA-TLDDIKELFGPTIAMIVDGDTKISKIHYKSNKEQ--- 119

Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
                A+  R++ LAM++++RV+IVKLADRLHNMRTL H+ P KQ  I+ ETL+++AP+A
Sbjct: 120 ----MAETHRKLLLAMSKDIRVMIVKLADRLHNMRTLKHLRPDKQRRISNETLEIYAPIA 175

Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
             LG+  IK ELE+LS  Y N + Y ++   +     +    +  A K++   I D   L
Sbjct: 176 DRLGISTIKWELEDLSLRYLNPQQYYRIVHLMNSRRDQRIDYISAAIKVVKTAIAD---L 232

Query: 365 DLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
           DL     EI    K  YS+Y+ ++      +++  +  +R+++               + 
Sbjct: 233 DLGP-NVEIYGRPKHIYSVYRKMVTQHKQFSQIYDLLAIRVVV------------DSIKD 279

Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDL 484
           CY VLG +H  WTP+P   KDYIA PK NGYQSLHTT+I         LE+QIRT +M  
Sbjct: 280 CYAVLGAIHTSWTPMPGRFKDYIAMPKANGYQSLHTTVIG---PEGRPLEIQIRTHQMHE 336

Query: 485 IAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFV 544
           +AE G+AAH++ +   T  V  A  + +                    LN ++E  E   
Sbjct: 337 VAEYGVAAHWAYKEGKTNGVDQASQDSKK-------------------LNVVKEILELRS 377

Query: 545 GNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVN 604
            +  + EF+  I  D+   +V+ FTP+G+   +PKGA  +D AY IHTE+GN    AKVN
Sbjct: 378 ESNGTDEFMQGIQSDVFADKVYAFTPKGDAIEMPKGAGPLDMAYQIHTEVGNHTTGAKVN 437

Query: 605 GNLVSPTHVLANAEVVEIITYNVS 628
           G +V   + + N ++V+I+T + S
Sbjct: 438 GRIVPLNYEIKNGDIVDILTSSSS 461


>gi|238018954|ref|ZP_04599380.1| hypothetical protein VEIDISOL_00814 [Veillonella dispar ATCC 17748]
 gi|237864438|gb|EEP65728.1| hypothetical protein VEIDISOL_00814 [Veillonella dispar ATCC 17748]
          Length = 746

 Score =  324 bits (831), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 183/486 (37%), Positives = 284/486 (58%), Gaps = 52/486 (10%)

Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
           +YL+ +E   V +A  LA +AH+GQ R SGEP+I+HP+ VA IL  L++D  ++ A L+H
Sbjct: 32  TYLTDDECNQVLKAFELADKAHEGQLRASGEPYIMHPLAVAEILAHLQIDHITLMAALMH 91

Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
           D VEDT+  + E +E+ FG+ V  +V+G TK+++        +  + +D + ++ R+M L
Sbjct: 92  DVVEDTSY-SKEDLEKMFGSEVAFLVDGVTKLNQF-------QYETKEDRQMENYRKMIL 143

Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
           AM ++VRV+++KLADRLHNMRTL HM   KQ  IA ETL++FAPLA  LG++ +K ELE+
Sbjct: 144 AMAKDVRVVVIKLADRLHNMRTLKHMRSDKQKRIAKETLEIFAPLAHRLGIFNVKWELED 203

Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
           LSF Y   E Y      + D  K+  +  E+     M ++   + L    +K +I+   K
Sbjct: 204 LSFRYLEPEKYYD----LVDQMKQKRQAREDIVNDTMSQLT--KALGEAHIKADIKGRPK 257

Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
             YSIYK + K    ++++  +  +R+I+   P             CY VLG+ H +W P
Sbjct: 258 HFYSIYKKMKKDNRDLSQIYDLLAVRVIVDTIPD------------CYAVLGIAHSLWKP 305

Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
           +P   KDYI+ PK N YQSLHTT+I  + +    +E+QIRT EM  ++E G+AAH+  + 
Sbjct: 306 LPYRFKDYISMPKSNMYQSLHTTVIGTMGQP---VEIQIRTWEMHRVSEYGVAAHWRYK- 361

Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
                      NG           + +   +++WL  + EWQ+    N T  E V+ +  
Sbjct: 362 -------EGNKNG-----------DKDFDQKVAWLRQVLEWQD--TSNPT--ELVNALKL 399

Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
           D+    VFVFTP+G++  LP G+  +D+AY +HT++G++ V AKVNG +V   + L N +
Sbjct: 400 DVFSGEVFVFTPKGDVVKLPIGSVPLDFAYRVHTDVGHRCVGAKVNGKIVPLDYTLQNGD 459

Query: 619 VVEIIT 624
           +V+IIT
Sbjct: 460 IVDIIT 465


>gi|414156756|ref|ZP_11413057.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus sp.
           F0442]
 gi|410869749|gb|EKS17709.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus sp.
           F0442]
          Length = 739

 Score =  324 bits (831), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 189/494 (38%), Positives = 292/494 (59%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YLSP ++  V++AL+ A + H GQ R+SGEP+IIHP++VA IL +L+LD  ++A G 
Sbjct: 16  TKKYLSPEDVAFVQKALVYAVDCHSGQFRQSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDTN  + + +E EFG  VR IV+G   V+KLGK+K K+    +    A++ R+M
Sbjct: 76  LHDVVEDTNA-SLDDLEREFGHDVRVIVDG---VTKLGKVKYKSHEEQL----AENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM++++RVI+VKLADRLHNMRTL H+   KQ  I+ ET++++APLA  LG+  +K EL
Sbjct: 128 LMAMSQDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISSVKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y N  ++ K+   + +  +E E+ +EE    +      + +     +  +I   
Sbjct: 188 EDLSFRYLNETEFYKISHMMKEKRREREELVEEVVHKI------ETYAGERHLHGKIYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSIY+ +   +   +E+  +  +R I           L +P  + Y +LG +H +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFDEIYDLIAIRCI-----------LDTPSDV-YAMLGYIHELW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA  K NGYQS+HTT    +Y     +E QIRT+EM  +AE G+AAH++ 
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  + G V                 N+   A+ ++W+  + E Q++   +  ++EFV+ +
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---SGDAKEFVENV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             D+L   ++VFTP G +++LPK +  +D+AY IHT++G K + AKVNG +V     L  
Sbjct: 386 KEDILAEEIYVFTPDGTVRSLPKDSGPIDFAYEIHTKVGEKAIGAKVNGRMVPLNTKLRT 445

Query: 617 AEVVEIITYNVSFS 630
            + VEIIT   SF 
Sbjct: 446 GDQVEIITNANSFG 459


>gi|402837147|ref|ZP_10885675.1| GTP diphosphokinase [Eubacteriaceae bacterium OBRC8]
 gi|402275627|gb|EJU24772.1| GTP diphosphokinase [Eubacteriaceae bacterium OBRC8]
          Length = 733

 Score =  324 bits (831), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 192/498 (38%), Positives = 295/498 (59%), Gaps = 54/498 (10%)

Query: 130 LWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
           + E++  T+   +P+ +++++ +A   A   H+GQ RRSGE +I+HPV+VA IL ELELD
Sbjct: 1   MLENVIKTVQQYNPDADVDILIKAYEYAENKHEGQVRRSGEAYIVHPVQVAGILAELELD 60

Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKL--KCKNENHSVQ 246
             +IAAGL+HD VEDT+  T E++   FG  +  +V+G   V+KLGK+  K K EN +  
Sbjct: 61  VATIAAGLMHDVVEDTDT-TNEQMINMFGVEIATLVDG---VTKLGKIDYKSKEENQT-- 114

Query: 247 DVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKL 306
               ++LR+MF+AM ++VRV+++KLADRLHNMRTL  MPP K    + ET+++FAP+A  
Sbjct: 115 ----ENLRKMFMAMAKDVRVVLIKLADRLHNMRTLKFMPPRKAREKSKETIEIFAPIAGR 170

Query: 307 LGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDL 366
           LG+ +IK E+E+++  Y   E Y  ++R+++    + +  +      L +KI+ +     
Sbjct: 171 LGISKIKWEMEDIALRYLEPEFYFDMERKISRRITQRDSYINGIISKLKEKIQVE----- 225

Query: 367 MTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICY 426
             +  EI    K  YSIYK +     S  E+     +R+++K              + CY
Sbjct: 226 ANIPCEIYGREKNMYSIYKKMKFKNKSFEEIYDFIAVRVVVK------------ELKDCY 273

Query: 427 HVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIA 486
            V+G+VH IW PIP   KDYIA PK N YQS+HTT+     E    +E+QIRTEEM   A
Sbjct: 274 GVIGIVHTIWKPIPTRFKDYIAMPKVNMYQSIHTTIFGPDGEP---VEIQIRTEEMHKTA 330

Query: 487 ERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGN 546
           E GIAAH+  +             GR      +  N +++  +++WL  I +WQ+E V +
Sbjct: 331 EYGIAAHWKYK------------EGR------IDTNESDMDKKLAWLRQIMDWQKE-VSD 371

Query: 547 MTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGN 606
            T  EF++++  DL  ++VFVFTP+G++  LP  +T +D AY IHT +GN  + AK++G 
Sbjct: 372 PT--EFMESLKIDLFANQVFVFTPKGDVIELPTDSTPIDLAYKIHTNVGNTCIGAKISGK 429

Query: 607 LVSPTHVLANAEVVEIIT 624
           +V     L N ++VEI+T
Sbjct: 430 IVPLDTKLKNGQIVEIMT 447


>gi|294794004|ref|ZP_06759141.1| GTP diphosphokinase [Veillonella sp. 3_1_44]
 gi|294455574|gb|EFG23946.1| GTP diphosphokinase [Veillonella sp. 3_1_44]
          Length = 735

 Score =  324 bits (831), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 186/500 (37%), Positives = 288/500 (57%), Gaps = 52/500 (10%)

Query: 125 DSPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
           D  + L E +    +YL+ +E + V +A  LA +AH+GQ R SGEP+I+HP+ VA IL  
Sbjct: 7   DKSKALAEFMEYIHTYLTDDECDQVLKAFELADKAHEGQFRASGEPYIMHPLAVADILAH 66

Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
           L++D  ++ A L+HD VEDT+  + E +EE FG+ V  +V+G TK+++        +  +
Sbjct: 67  LQIDHITLMAALMHDVVEDTSY-SKEDLEEMFGSEVAFLVDGVTKLNQF-------QYET 118

Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
            +D + ++ R+M LAM ++VRV+++KL DRLHNMRTL HM   KQ  IA ETL++FAPLA
Sbjct: 119 KEDRQMENYRKMILAMAKDVRVVVIKLGDRLHNMRTLKHMRSDKQKRIAKETLEIFAPLA 178

Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
             LG++ +K ELE+LSF Y   E Y      + D  K+  +  E+     M+++   + L
Sbjct: 179 HRLGIFNVKWELEDLSFRYLEPEKYYD----LVDQMKQKRQVREDIVNDTMRQLT--KAL 232

Query: 365 DLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
               +K +I+   K  YSIYK + K    ++++  +  +R+I+   P             
Sbjct: 233 SEAHIKADIKGRPKHFYSIYKKMKKDNRDLSQIYDLLAVRVIVDSIPD------------ 280

Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDL 484
           CY VLG+ H +W P+P   KDYI+ PK N YQSLHTT+I  + +    +E+QIRT EM  
Sbjct: 281 CYAVLGIAHSLWKPLPYRFKDYISMPKSNMYQSLHTTVIGTMGQP---VEIQIRTWEMHR 337

Query: 485 IAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFV 544
           ++E G+AAH+  +            NG           +     +++WL  + EWQ+   
Sbjct: 338 VSEYGVAAHWRYK--------EGNKNG-----------DKEFDQKVAWLRQVLEWQD--T 376

Query: 545 GNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVN 604
            N T  E V+ +  D+    VFVFTP+G++  LP G+  +D+AY +HT++G+  V AKVN
Sbjct: 377 SNPT--ELVNALKLDVFSGEVFVFTPKGDVVKLPIGSVPLDFAYRVHTDVGHHCVGAKVN 434

Query: 605 GNLVSPTHVLANAEVVEIIT 624
           G +V   + L N ++V+IIT
Sbjct: 435 GKIVPLDYTLQNGDIVDIIT 454


>gi|288555362|ref|YP_003427297.1| GTP pyrophosphokinase [Bacillus pseudofirmus OF4]
 gi|288546522|gb|ADC50405.1| GTP pyrophosphokinase (stringent response) [Bacillus pseudofirmus
           OF4]
          Length = 728

 Score =  324 bits (831), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 193/497 (38%), Positives = 288/497 (57%), Gaps = 51/497 (10%)

Query: 134 LRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIA 193
           L     YLS +++  +R+A   A ++H GQ R+SGEP+I+HP++VA I+ ELELD  ++A
Sbjct: 7   LEKASQYLSEDDIAFLRKAYEYAEKSHSGQYRKSGEPYILHPIQVAGIIVELELDPNTVA 66

Query: 194 AGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDL 253
           A  LHD VEDT V T E I  EF   V  +V+G TK+ K      + +       +A++ 
Sbjct: 67  AAFLHDVVEDTEV-TVEEITAEFNEQVAMLVDGVTKLKKFKYKSKEEQ-------QAENH 118

Query: 254 RQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIK 313
           R+M +AM +++RVI++KLADRLHNMRTL +MPP KQ   + ETL++FAPLA  LG+  IK
Sbjct: 119 RKMLVAMAKDIRVILIKLADRLHNMRTLKYMPPEKQRVTSNETLEIFAPLAHRLGISTIK 178

Query: 314 SELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEI 373
            ELE+ +  Y + + Y     R+ +L K    E E+    +M  I  ++ L  + V  E+
Sbjct: 179 WELEDTALRYLDPQQYY----RIVNLMKRKRAEREQYLSQVMDTI--NEHLTDVKVNAEL 232

Query: 374 RSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVH 433
               K  YSIY+ ++      NE+  +  +RII++              + CY VLG++H
Sbjct: 233 SGRPKHIYSIYRKMVLQNKQFNEIYDLLAVRIIVRNI------------KDCYAVLGVIH 280

Query: 434 GIWTPIPRAMKDYIATPKPNGYQSLHTTLI-PFLYESMFRLEVQIRTEEMDLIAERGIAA 492
             W P+P   KDYIA PK N YQSLHTT++ PF       LEVQIRTEEM  +AE G+AA
Sbjct: 281 TCWKPMPGRFKDYIAMPKANMYQSLHTTVVGPFGDP----LEVQIRTEEMHRVAEFGVAA 336

Query: 493 HYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREF 552
           H++ +                  GK+   +  +   +++W   I E Q E      ++EF
Sbjct: 337 HWAYK-----------------EGKSSGSSKDSFEDKLTWFRDIIESQNE---TNDAQEF 376

Query: 553 VDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTH 612
           ++++  DL    VFVFTP+G++ +LP+G+  +D+AY IH+EIGN+ + AKVNG +V   H
Sbjct: 377 MESLKMDLFSDMVFVFTPKGDVLDLPRGSVPLDFAYRIHSEIGNRCIGAKVNGKMVPLDH 436

Query: 613 VLANAEVVEIITYNVSF 629
            L   ++VE++T   S+
Sbjct: 437 ELKTGDIVEVMTSKHSY 453


>gi|363892830|ref|ZP_09319981.1| RelA/SpoT family protein [Eubacteriaceae bacterium CM2]
 gi|361962457|gb|EHL15582.1| RelA/SpoT family protein [Eubacteriaceae bacterium CM2]
          Length = 733

 Score =  324 bits (831), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 192/498 (38%), Positives = 295/498 (59%), Gaps = 54/498 (10%)

Query: 130 LWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
           + E++  T+   +P+ +++++ +A   A   H+GQ RRSGE +I+HPV+VA IL ELELD
Sbjct: 1   MLENVIKTVQQYNPDADVDILIKAYEYAENKHEGQVRRSGEAYIVHPVQVAGILAELELD 60

Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKL--KCKNENHSVQ 246
             +IAAGL+HD VEDT+  T E++   FG  +  +V+G   V+KLGK+  K K EN +  
Sbjct: 61  VATIAAGLMHDVVEDTDT-TNEQMINMFGVEIATLVDG---VTKLGKIDYKSKEENQT-- 114

Query: 247 DVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKL 306
               ++LR+MF+AM ++VRV+++KLADRLHNMRTL  MPP K    + ET+++FAP+A  
Sbjct: 115 ----ENLRKMFMAMAKDVRVVLIKLADRLHNMRTLKFMPPRKAREKSKETIEIFAPIAGR 170

Query: 307 LGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDL 366
           LG+ +IK E+E+++  Y   E Y  ++R+++    + +  +      L +KI+ +     
Sbjct: 171 LGISKIKWEMEDIALRYLEPEFYFDMERKISRRITQRDSYINGIISKLKEKIQVE----- 225

Query: 367 MTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICY 426
             +  EI    K  YSIYK +     S  E+     +R+++K              + CY
Sbjct: 226 ANIPCEIYGREKNMYSIYKKMKFKNKSFEEIYDFIAVRVVVK------------ELKDCY 273

Query: 427 HVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIA 486
            V+G+VH IW PIP   KDYIA PK N YQS+HTT+     E    +E+QIRTEEM   A
Sbjct: 274 GVIGIVHTIWKPIPTRFKDYIAMPKVNMYQSIHTTIFGPDGEP---VEIQIRTEEMHKTA 330

Query: 487 ERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGN 546
           E GIAAH+  +             GR      +  N +++  +++WL  I +WQ+E V +
Sbjct: 331 EYGIAAHWKYK------------EGR------IDTNESDMDKKLAWLRQIMDWQKE-VSD 371

Query: 547 MTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGN 606
            T  EF++++  DL  ++VFVFTP+G++  LP  +T +D AY IHT +GN  + AK++G 
Sbjct: 372 PT--EFMESLKIDLFANQVFVFTPKGDVIELPTDSTPIDLAYKIHTNVGNTCIGAKISGK 429

Query: 607 LVSPTHVLANAEVVEIIT 624
           +V     L N ++VEI+T
Sbjct: 430 IVPLDTKLKNGQIVEIMT 447


>gi|259503164|ref|ZP_05746066.1| GTP diphosphokinase [Lactobacillus antri DSM 16041]
 gi|259168879|gb|EEW53374.1| GTP diphosphokinase [Lactobacillus antri DSM 16041]
          Length = 745

 Score =  324 bits (831), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 191/498 (38%), Positives = 284/498 (57%), Gaps = 48/498 (9%)

Query: 132 EDLRPTIS-YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWE 190
           ED++  +S Y++   + LV RA   A   H  Q+R+SGEP+IIHP++VA IL  L++D E
Sbjct: 10  EDVQKMVSSYMNAEHVALVERAYRFAEVCHHDQRRKSGEPYIIHPIQVAGILANLQMDPE 69

Query: 191 SIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKA 250
           ++AAG LHD VEDT   T + I+E FG T+  IV+G+TK   LGK++ K+    +    A
Sbjct: 70  TVAAGYLHDIVEDTGA-TLDDIKELFGPTIAMIVDGDTK---LGKIQYKSNKEQM----A 121

Query: 251 DDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMY 310
              R++ LAM++++RV+IVKLADRLHNMRTL H+ P KQ  I+ ETL+++AP+A  LG+ 
Sbjct: 122 ATHRKLLLAMSKDIRVMIVKLADRLHNMRTLKHLRPDKQRRISNETLEIYAPIADRLGIS 181

Query: 311 QIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVK 370
            IK ELE+LS  Y N + Y ++   +     +    +  + K++ K I D   LDL    
Sbjct: 182 TIKWELEDLSLRYLNPQQYYRIVHLMNSRRDQRVDSINRSIKLIKKAISD---LDLGP-N 237

Query: 371 TEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLG 430
            EI    K  YSIY+ ++      +++  +  +RI++               + CY  LG
Sbjct: 238 VEIYGRPKHIYSIYRKMVTQHKQFSQIYDLLAIRIVV------------DTIKDCYAALG 285

Query: 431 LVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGI 490
            +H  W P+P   KDYIA PK NGYQSLHTT+I         LEVQIRT  M  +AE G+
Sbjct: 286 AIHTNWKPMPGRFKDYIAMPKANGYQSLHTTIIG---PEGRPLEVQIRTHHMHQVAEFGV 342

Query: 491 AAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSR 550
           AAH++ +                  GKT  +     + +++ +  I E + E  G   + 
Sbjct: 343 AAHWAYK-----------------EGKTDGVQQTRDSQKLNIVKEILEMRSESQG---TD 382

Query: 551 EFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSP 610
           EF+  I  D+   +V+ FTP+G++  +PKGA  +D AY IHTE+GN    AKVNG +V  
Sbjct: 383 EFMQGIQSDIFTDKVYAFTPKGDVIEMPKGAGPLDMAYQIHTEVGNHTTGAKVNGRIVPL 442

Query: 611 THVLANAEVVEIITYNVS 628
            + + N ++V+I+T + S
Sbjct: 443 DYEIKNGDIVDILTSSSS 460


>gi|282850510|ref|ZP_06259889.1| GTP diphosphokinase [Veillonella parvula ATCC 17745]
 gi|282580003|gb|EFB85407.1| GTP diphosphokinase [Veillonella parvula ATCC 17745]
          Length = 746

 Score =  324 bits (831), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 186/500 (37%), Positives = 288/500 (57%), Gaps = 52/500 (10%)

Query: 125 DSPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
           D  + L E +    +YL+ +E + V +A  LA +AH+GQ R SGEP+I+HP+ VA IL  
Sbjct: 18  DKSKALAEFMEYIHTYLTDDECDQVLKAFELADKAHEGQFRASGEPYIMHPLAVADILAH 77

Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
           L++D  ++ A L+HD VEDT+  + E +EE FG+ V  +V+G TK+++        +  +
Sbjct: 78  LQIDHITLMAALMHDVVEDTSY-SKEDLEEMFGSEVAFLVDGVTKLNQF-------QYET 129

Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
            +D + ++ R+M LAM ++VRV+++KL DRLHNMRTL HM   KQ  IA ETL++FAPLA
Sbjct: 130 KEDRQMENYRKMILAMAKDVRVVVIKLGDRLHNMRTLKHMRSDKQKRIAKETLEIFAPLA 189

Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
             LG++ +K ELE+LSF Y   E Y      + D  K+  +  E+     M+++   + L
Sbjct: 190 HRLGIFNVKWELEDLSFRYLEPEKYYD----LVDQMKQKRQVREDIVNDTMRQLT--KAL 243

Query: 365 DLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
               +K +I+   K  YSIYK + K    ++++  +  +R+I+   P             
Sbjct: 244 SEAHIKADIKGRPKHFYSIYKKMKKDNRDLSQIYDLLAVRVIVDSIPD------------ 291

Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDL 484
           CY VLG+ H +W P+P   KDYI+ PK N YQSLHTT+I  + +    +E+QIRT EM  
Sbjct: 292 CYAVLGIAHSLWKPLPYRFKDYISMPKSNMYQSLHTTVIGTMGQP---VEIQIRTWEMHR 348

Query: 485 IAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFV 544
           ++E G+AAH+  +            NG           +     +++WL  + EWQ+   
Sbjct: 349 VSEYGVAAHWRYK--------EGNKNG-----------DKEFDQKVAWLRQVLEWQD--T 387

Query: 545 GNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVN 604
            N T  E V+ +  D+    VFVFTP+G++  LP G+  +D+AY +HT++G+  V AKVN
Sbjct: 388 SNPT--ELVNALKLDVFSGEVFVFTPKGDVVKLPIGSVPLDFAYRVHTDVGHHCVGAKVN 445

Query: 605 GNLVSPTHVLANAEVVEIIT 624
           G +V   + L N ++V+IIT
Sbjct: 446 GKIVPLDYTLQNGDIVDIIT 465


>gi|421100332|ref|ZP_15560964.1| putative GTP diphosphokinase [Leptospira borgpetersenii str.
           200901122]
 gi|410796642|gb|EKR98769.1| putative GTP diphosphokinase [Leptospira borgpetersenii str.
           200901122]
          Length = 674

 Score =  324 bits (831), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 193/499 (38%), Positives = 290/499 (58%), Gaps = 55/499 (11%)

Query: 126 SPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGEL 185
           + + L E +R T   L  +  E V++A  ++  AH GQ R SGEP+IIHP++V  IL EL
Sbjct: 9   TKDMLLEGIRET---LGESAYESVQKAYDVSERAHQGQFRLSGEPYIIHPLQVGFILYEL 65

Query: 186 ELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSV 245
            LD + I AGLLHD +EDT     + I + FG  +  +VEG TK+SK+       ++ S 
Sbjct: 66  GLDEKVICAGLLHDVIEDTQYSRDDMIRD-FGEDITDLVEGVTKISKI-------KSQSK 117

Query: 246 QDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAK 305
           +   A+++R++ +A  +++RVI++KLAD+ HNMRTLS   P KQ  IA ETL ++AP+A 
Sbjct: 118 ETEAAENIRKIIVATIKDIRVILIKLADKTHNMRTLSFQLPEKQRRIAQETLSLYAPIAG 177

Query: 306 LLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLD 365
            LG+Y+IKSELE+L+F   N E+Y +VK+ +     E E  +E    IL++++ + Q   
Sbjct: 178 RLGIYKIKSELEDLAFQVLNPEEYQEVKKNINSKKSEREGFIETLKIILLQRLSEIQ--- 234

Query: 366 LMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQIC 425
              ++ ++    K  YSIY+ +     + NE+  +  +RII             +  + C
Sbjct: 235 ---IEADVDGRAKHFYSIYRKMKLKEKTFNEIFDLRAIRII------------TNEVKDC 279

Query: 426 YHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLI 485
           Y VLG+VH +W P+P   KDYIATPK N YQSLHTT+I         LEVQIRT +M+ I
Sbjct: 280 YGVLGIVHTLWNPVPGRFKDYIATPKTNMYQSLHTTVIG---PDGKPLEVQIRTRDMNDI 336

Query: 486 AERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVG 545
           AE GIAAH+        +    +P+          ++  N+ +R  WL  +  WQ+    
Sbjct: 337 AEYGIAAHW--------MYKEGKPS----------VSEKNVKVR--WLELLSSWQD---S 373

Query: 546 NMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNG 605
            +  +EFV+ +  DL    VFVFTP+GEI  LPKGAT++D+A+ IHT++G K    ++NG
Sbjct: 374 ALDPKEFVEELKYDLHEDEVFVFTPKGEILQLPKGATILDFAFRIHTDVGLKAKGGRING 433

Query: 606 NLVSPTHVLANAEVVEIIT 624
            ++     L + + +EIIT
Sbjct: 434 RMLPLRTELRSGDQIEIIT 452


>gi|323497037|ref|ZP_08102060.1| bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis
           pyrophosphate 3'-pyrophosphohydrolase [Vibrio
           sinaloensis DSM 21326]
 gi|323317881|gb|EGA70869.1| bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis
           pyrophosphate 3'-pyrophosphohydrolase [Vibrio
           sinaloensis DSM 21326]
          Length = 706

 Score =  324 bits (831), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 191/487 (39%), Positives = 284/487 (58%), Gaps = 54/487 (11%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           YL+  ++E +R++ ++A +AH+GQ R SGEP+IIHPV VARIL E+ LD E++ A LLHD
Sbjct: 14  YLTEPQIEALRQSYVVAKDAHEGQTRSSGEPYIIHPVAVARILAEMRLDIETLQAALLHD 73

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            +EDT V T E +EE+FG TV  +V+G   VSKL KLK ++     ++ +A++ R+M LA
Sbjct: 74  VIEDTEV-TKEELEEQFGTTVAELVDG---VSKLDKLKFRDR----KEAQAENFRKMVLA 125

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M +++RVI++KLADR HNMRTL  + P K+  IA ETL++++PLA  LG++ IK+ELE L
Sbjct: 126 MVQDIRVILIKLADRTHNMRTLGALRPDKKRRIARETLEIYSPLAHRLGIHNIKTELEEL 185

Query: 320 SF--MYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVC 377
            F  +Y N     +V + V    + + KE+     I     E +  L+ + +K  +    
Sbjct: 186 GFEALYPNR---YRVLKEVVKSARGNRKEM-----IQRIHTEIEGRLEEVGLKARVFGRE 237

Query: 378 KEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWT 437
           K  +SIY  +       + +  I   R++++                CY VLG VH ++ 
Sbjct: 238 KNLFSIYNKMKTKEQRFHTIMDIYAFRVVVEDADT------------CYRVLGQVHSLYK 285

Query: 438 PIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGR 497
           P P  MKDYIA PK NGYQSLHT+++         +EVQIRTE+MD +A++G+AAH+S +
Sbjct: 286 PRPSRMKDYIAVPKANGYQSLHTSMVG---PHGVPVEVQIRTEDMDQMADKGVAAHWSYK 342

Query: 498 VFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTIT 557
                        G   R  T     A       W+ ++ E Q+   GN  S EF++ + 
Sbjct: 343 -------------GSGERTGTTAQVKAQ-----RWMQSLLELQQS-AGN--SFEFIENVK 381

Query: 558 RDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANA 617
            DL    ++VFTP+G I  LP GAT VD+AY +HT++GN  V A+V+ N    +  L N 
Sbjct: 382 SDLFPDEIYVFTPKGRIVELPVGATAVDFAYAVHTDVGNTCVGARVDRNPYPLSKALKNG 441

Query: 618 EVVEIIT 624
           + +EII+
Sbjct: 442 QTIEIIS 448


>gi|313893200|ref|ZP_07826777.1| GTP diphosphokinase [Veillonella sp. oral taxon 158 str. F0412]
 gi|313442553|gb|EFR60968.1| GTP diphosphokinase [Veillonella sp. oral taxon 158 str. F0412]
          Length = 742

 Score =  324 bits (831), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 192/515 (37%), Positives = 288/515 (55%), Gaps = 74/515 (14%)

Query: 125 DSPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
           D  + L E +    +YL+ +E   V +A  LA +AH+GQ R SGEP+I+HP+ VA IL  
Sbjct: 18  DKGKALAEFMEYIHTYLTDDECNQVLKAFELADKAHEGQFRASGEPYIMHPLAVADILAH 77

Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
           L++D  ++ A L+HD VEDT+  T E +E+ FG+ V  +V+G TK+++        +  +
Sbjct: 78  LQIDHITLMAALMHDVVEDTSY-TKEDLEKMFGSEVAFLVDGVTKLNQF-------QYET 129

Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
            +D + ++ R+M LAM ++VRV+++KL DRLHNMRTL HM   KQ  IA ETL++FAPLA
Sbjct: 130 KEDRQMENYRKMILAMAKDVRVVVIKLGDRLHNMRTLKHMRSDKQKRIAKETLEIFAPLA 189

Query: 305 KLLGMYQIKSELENLSFMYTNAEDY------AKVKRR-----VADLYKEHEKELEEANKI 353
             LG++ +K ELE+LSF Y   E Y       K KR+     V D   +  K L EAN  
Sbjct: 190 HRLGIFNVKWELEDLSFRYLEPEKYYDLVDQMKQKRQVREDIVNDTMSQLTKALGEAN-- 247

Query: 354 LMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCS 413
                          +K +I+   K  YSIYK + K    ++++  +  +R+I+   P  
Sbjct: 248 ---------------IKADIKGRPKHFYSIYKKMKKDNRDLSQIYDLLAVRVIVDTIPD- 291

Query: 414 GVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRL 473
                      CY VLG+ H +W P+P   KDYI+ PK N YQSLHTT+I  + +    +
Sbjct: 292 -----------CYAVLGIAHSLWKPLPYRFKDYISMPKSNMYQSLHTTVIGTMGQP---V 337

Query: 474 EVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWL 533
           E+QIRT EM  ++E G+AAH+  +            NG           +     +++WL
Sbjct: 338 EIQIRTWEMHRVSEYGVAAHWRYK--------EGNKNG-----------DKEFDQKVAWL 378

Query: 534 NAIREWQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTE 593
             + EWQ+    N T  E V+ +  D+    VFVFTP+G++  LP G+  +D+AY +HT+
Sbjct: 379 RQVLEWQD--TSNPT--ELVNALKLDVFSGEVFVFTPKGDVVKLPIGSVPLDFAYRVHTD 434

Query: 594 IGNKMVAAKVNGNLVSPTHVLANAEVVEIITYNVS 628
           +G++ V AKVNG +V   + L N ++V+IIT   S
Sbjct: 435 VGHRCVGAKVNGKIVPLDYTLQNGDIVDIITSKTS 469


>gi|417885550|ref|ZP_12529704.1| GTP diphosphokinase [Lactobacillus oris F0423]
 gi|341595472|gb|EGS38121.1| GTP diphosphokinase [Lactobacillus oris F0423]
          Length = 745

 Score =  324 bits (831), Expect = 9e-86,   Method: Compositional matrix adjust.
 Identities = 191/498 (38%), Positives = 284/498 (57%), Gaps = 48/498 (9%)

Query: 132 EDLRPTIS-YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWE 190
           ED++  +S Y++   + LV RA   A   H  Q+R+SGEP+IIHP++VA IL  L++D E
Sbjct: 10  EDVQKMVSSYMNAEHVALVERAYRFAEVCHHDQRRKSGEPYIIHPIQVAGILANLQMDPE 69

Query: 191 SIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKA 250
           ++AAG LHD VEDT   T + I+E FG T+  IV+G+TK   LGK++ K+    +    A
Sbjct: 70  TVAAGYLHDIVEDTGA-TLDDIKELFGPTIAMIVDGDTK---LGKIQYKSNKEQM----A 121

Query: 251 DDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMY 310
              R++ LAM++++RV+IVKLADRLHNMRTL H+ P KQ  I+ ETL+++AP+A  LG+ 
Sbjct: 122 ATHRKLLLAMSKDIRVMIVKLADRLHNMRTLKHLRPDKQRRISNETLEIYAPIADRLGIS 181

Query: 311 QIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVK 370
            IK ELE+LS  Y N + Y ++   +     +    +  + K++ K I D   LDL    
Sbjct: 182 TIKWELEDLSLRYLNPQQYYRIVHLMNSRRDQRVDSINRSIKLIKKAISD---LDLGP-N 237

Query: 371 TEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLG 430
            EI    K  YSIY+ ++      +++  +  +RI++               + CY  LG
Sbjct: 238 VEIYGRPKHIYSIYRKMVTQHKQFSQIYDLLAIRIVV------------DTIKDCYAALG 285

Query: 431 LVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGI 490
            +H  W P+P   KDYIA PK NGYQSLHTT+I         LEVQIRT  M  +AE G+
Sbjct: 286 AIHTNWKPMPGRFKDYIAMPKANGYQSLHTTIIG---PEGRPLEVQIRTHHMHQVAEFGV 342

Query: 491 AAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSR 550
           AAH++ +                  GKT  +     + +++ +  I E + E  G   + 
Sbjct: 343 AAHWAYK-----------------EGKTDGVQQTRDSQKLNVVKEILEMRSESQG---TD 382

Query: 551 EFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSP 610
           EF+  I  D+   +V+ FTP+G++  +PKGA  +D AY IHTE+GN    AKVNG +V  
Sbjct: 383 EFMQGIQSDIFTDKVYAFTPKGDVIEMPKGAGPLDMAYQIHTEVGNHTTGAKVNGRIVPL 442

Query: 611 THVLANAEVVEIITYNVS 628
            + + N ++V+I+T + S
Sbjct: 443 DYEIKNGDIVDILTSSSS 460


>gi|434389540|ref|YP_007100151.1| (p)ppGpp synthetase, RelA/SpoT family [Chamaesiphon minutus PCC
           6605]
 gi|428020530|gb|AFY96624.1| (p)ppGpp synthetase, RelA/SpoT family [Chamaesiphon minutus PCC
           6605]
          Length = 779

 Score =  324 bits (831), Expect = 9e-86,   Method: Compositional matrix adjust.
 Identities = 193/483 (39%), Positives = 275/483 (56%), Gaps = 40/483 (8%)

Query: 145 ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDT 204
           E +L++ A   A+E H  QKR+SGEP+I HP+ VA +L +L      IAAG LHD VEDT
Sbjct: 60  ERKLIKNAFEFAYELHGDQKRKSGEPYICHPIAVAGLLRDLGGGAPMIAAGFLHDVVEDT 119

Query: 205 NVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEV 264
            + T ++IE +FG     +VEG TK+SK        E  S ++ +A++ R+MF+AM +++
Sbjct: 120 PI-TIDQIEAKFGKETAHLVEGVTKLSKF-------EFSSKKEQQAENFRRMFIAMAQDI 171

Query: 265 RVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYT 324
           RVI+VKLADRLHNMRTL H+   +Q +I+ ET  +FAPLA  LG+ +IK ELE+LSF Y 
Sbjct: 172 RVIVVKLADRLHNMRTLDHLRTERQQAISQETRDIFAPLADRLGLGRIKWELEDLSFKYI 231

Query: 325 NAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVK-TEIRSVCKEPYSI 383
            AEDY +++  VA+     E  +    +++  +      LD   +   +I    K  YSI
Sbjct: 232 EAEDYRRIQDLVAEKRTARESRIANVTEMIRHR------LDRAKINYVDISGRPKHLYSI 285

Query: 384 YKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAM 443
           Y+ +   +   +E+  +  +RII++                CY  L  +H  + PIP   
Sbjct: 286 YQKMRYQKKEFSEIYDLTAIRIIVE------------SNHECYLALAEIHDAFKPIPGRF 333

Query: 444 KDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGL 503
           KDYI  PK N YQSLHTT++ F   +   LEVQIRT EM  +AE GIAAH+  +      
Sbjct: 334 KDYIGLPKNNRYQSLHTTVVGF---TGTPLEVQIRTLEMHHVAEYGIAAHWKYKE----- 385

Query: 504 VGHARPNG--RSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLL 561
              A  +G   S  GK        +  + +WL  + EWQ +    +   EF D +   LL
Sbjct: 386 AAKADKSGPETSETGKATTNRRTEVDEKFAWLRQLLEWQNDVKDAI---EFDDHLKDHLL 442

Query: 562 GSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVE 621
              V+VFTP+GE+ +L +G+T VDYAY IHTE+GN    AKVN  +V  +  L+N ++VE
Sbjct: 443 ERDVYVFTPKGEVVSLRQGSTPVDYAYRIHTEVGNHCAGAKVNDRIVPLSRTLSNGDIVE 502

Query: 622 IIT 624
           IIT
Sbjct: 503 IIT 505


>gi|337283189|ref|YP_004622660.1| GTP diphosphokinase [Streptococcus parasanguinis ATCC 15912]
 gi|335370782|gb|AEH56732.1| GTP diphosphokinase [Streptococcus parasanguinis ATCC 15912]
          Length = 739

 Score =  324 bits (830), Expect = 9e-86,   Method: Compositional matrix adjust.
 Identities = 189/494 (38%), Positives = 292/494 (59%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YLSP ++  V++AL+ A + H GQ R+SGEP+IIHP++VA IL +L+LD  ++A G 
Sbjct: 16  TKKYLSPEDVAFVQKALVYAVDCHSGQFRQSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT+  T + +E EFG  VR IV+G   V+KLGK+K K+    +    A++ R+M
Sbjct: 76  LHDVVEDTDA-TLDDLEREFGHDVRVIVDG---VTKLGKVKYKSHEEQL----AENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM++++RVI+VKLADRLHNMRTL H+   KQ  I+ ET++++APLA  LG+  +K EL
Sbjct: 128 LMAMSQDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISSVKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y N  ++ K+   + +  +E E+ +EE    +      + +     +  +I   
Sbjct: 188 EDLSFRYLNETEFYKISHMMKEKRREREELVEEVVHKI------ETYAGERHLHGKIYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSIY+ +   +   +E+  +  +R I           L +P  + Y +LG +H +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFDEIYDLIAIRCI-----------LDTPSDV-YAMLGYIHELW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA  K NGYQS+HTT    +Y     +E QIRT+EM  +AE G+AAH++ 
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  + G V                 N+   A+ ++W+  + E Q++   +  ++EFV+ +
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---SGDAKEFVENV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             D+L   ++VFTP G +++LPK +  +D+AY IHT++G K + AKVNG +V     L  
Sbjct: 386 KEDILAEEIYVFTPDGTVRSLPKDSGPIDFAYEIHTKVGEKAIGAKVNGRMVPLNTKLRT 445

Query: 617 AEVVEIITYNVSFS 630
            + VEIIT   SF 
Sbjct: 446 GDQVEIITNANSFG 459


>gi|419799077|ref|ZP_14324447.1| RelA/SpoT family protein [Streptococcus parasanguinis F0449]
 gi|385698804|gb|EIG29147.1| RelA/SpoT family protein [Streptococcus parasanguinis F0449]
          Length = 739

 Score =  324 bits (830), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 189/494 (38%), Positives = 293/494 (59%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YLSP ++  V++AL+ A + H+GQ R+SGEP+IIHP++VA IL +L+LD  ++A G 
Sbjct: 16  TKKYLSPEDVAFVQKALVYAVDCHNGQFRQSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT+  T + +E EFG  VR IV+G   V+KLGK+K K+    +    A++ R+M
Sbjct: 76  LHDVVEDTDA-TLDDLEREFGHDVRVIVDG---VTKLGKVKYKSHEEQL----AENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM++++RVI+VKLADRLHNMRTL H+   KQ  I+ ET++++APLA  LG+  +K EL
Sbjct: 128 LMAMSQDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISSVKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y N  ++ K+   + +  +E E+ +EE    +      + +     +  +I   
Sbjct: 188 EDLSFRYLNEVEFYKISHMMKEKRREREELVEEVVHKI------ETYAGERHLHGKIYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSIY+ +   +   +E+  +  +R I           L +P  + Y +LG +H +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFDEIYDLIAIRCI-----------LDTPSDV-YAMLGYIHELW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA  K NGYQS+HTT    +Y     +E QIRT+EM  +AE G+AAH++ 
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  + G V                 N+   A+ ++W+  + E Q++   +  ++EFV+ +
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---SGDAKEFVENV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             D+L   ++VFTP G +++LPK +  +D+AY IHT++G K + AKVNG +V     L  
Sbjct: 386 KEDILAEEIYVFTPDGTVRSLPKDSGPIDFAYEIHTKVGEKAIGAKVNGRMVPLNTKLRT 445

Query: 617 AEVVEIITYNVSFS 630
            + VEIIT   SF 
Sbjct: 446 GDQVEIITNANSFG 459


>gi|417918672|ref|ZP_12562222.1| RelA/SpoT family protein [Streptococcus parasanguinis SK236]
 gi|342828342|gb|EGU62716.1| RelA/SpoT family protein [Streptococcus parasanguinis SK236]
          Length = 739

 Score =  324 bits (830), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 189/494 (38%), Positives = 293/494 (59%), Gaps = 50/494 (10%)

Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
           T  YLSP ++  V++AL+ A + H+GQ R+SGEP+IIHP++VA IL +L+LD  ++A G 
Sbjct: 16  TKKYLSPEDVAFVQKALVYAVDCHNGQFRQSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75

Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
           LHD VEDT+  T + +E EFG  VR IV+G   V+KLGK+K K+    +    A++ R+M
Sbjct: 76  LHDVVEDTDA-TLDDLEREFGHDVRVIVDG---VTKLGKVKYKSHEEQL----AENHRKM 127

Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
            +AM++++RVI+VKLADRLHNMRTL H+   KQ  I+ ET++++APLA  LG+  +K EL
Sbjct: 128 LMAMSQDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISSVKWEL 187

Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
           E+LSF Y N  ++ K+   + +  +E E+ +EE    +      + +     +  +I   
Sbjct: 188 EDLSFRYLNEVEFYKISHMMKEKRREREELVEEVVHKI------ETYAGERHLHGKIYGR 241

Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
            K  YSIY+ +   +   +E+  +  +R I           L +P  + Y +LG +H +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFDEIYDLIAIRCI-----------LDTPSDV-YAMLGYIHELW 289

Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
            P+P   KDYIA  K NGYQS+HTT    +Y     +E QIRT+EM  +AE G+AAH++ 
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345

Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
           +  + G V                 N+   A+ ++W+  + E Q++   +  ++EFV+ +
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---SGDAKEFVENV 385

Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
             D+L   ++VFTP G +++LPK +  +D+AY IHT++G K + AKVNG +V     L  
Sbjct: 386 KEDILAEEIYVFTPDGTVRSLPKDSGPIDFAYEIHTKVGEKAIGAKVNGRMVPLNTKLRT 445

Query: 617 AEVVEIITYNVSFS 630
            + VEIIT   SF 
Sbjct: 446 GDQVEIITNANSFG 459


>gi|78356612|ref|YP_388061.1| (p)ppGpp synthetase I SpoT/RelA [Desulfovibrio alaskensis G20]
 gi|78219017|gb|ABB38366.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfovibrio alaskensis G20]
          Length = 715

 Score =  324 bits (830), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 194/499 (38%), Positives = 290/499 (58%), Gaps = 63/499 (12%)

Query: 132 EDLRPTIS-YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWE 190
           +D+  TI+ Y    ++ L+++A + +  AH GQ R SGEP+++HP+ VA  L ++ LD  
Sbjct: 5   QDILDTIAEYRQDADIALIQKAYVFSAAAHAGQTRLSGEPYLMHPLAVAHSLAKMRLDEA 64

Query: 191 SIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKA 250
           SIAAGLLHDTVEDT+    E I+  FG  V  IV+G TK+S++          S ++ +A
Sbjct: 65  SIAAGLLHDTVEDTST-GIEEIDSLFGEEVADIVDGVTKISQM-------TFESKEEAQA 116

Query: 251 DDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMY 310
           +++R+M LAM E++RV+IVKLADRLHNM TL    PHKQ  IA ET+ ++APLA  LG++
Sbjct: 117 ENIRKMVLAMAEDIRVLIVKLADRLHNMSTLDFQKPHKQKLIAQETMDIYAPLANRLGLH 176

Query: 311 QIKSELENLSFMYTNAEDYAKV-----KRRVADLYKEHEKELEEANKILMKKIEDDQFLD 365
           +IK +LE+LS  Y   + ++++     K+RVAD        ++    +L         LD
Sbjct: 177 RIKLQLEDLSLRYLRPDVWSQLSDWLEKKRVAD-----SDYIDNVISLLRG------MLD 225

Query: 366 LMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQIC 425
              +  +++   K   SIY+ ++    +++EV  +   R+I+               + C
Sbjct: 226 ENDIPGKVKGRIKHINSIYRKMVHQNLALDEVPDVIAFRVIV------------DDVKNC 273

Query: 426 YHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLI 485
           Y +LGLVH  W PI    KDYI+ PK N YQSLHTT++    E   R+E+QIRTEEMD +
Sbjct: 274 YAMLGLVHAAWKPIHGRFKDYISMPKANMYQSLHTTVVGPGGE---RIEIQIRTEEMDRM 330

Query: 486 AERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVG 545
           AE G+A+H+  +             G+  + K V         + +WL  + +WQ+    
Sbjct: 331 AEHGVASHWLYK------------EGQRVKSKDV--------RQFAWLREMLDWQK---M 367

Query: 546 NMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNG 605
              SREF+ ++  DL    V+VFTPRGE+K LP+GA+ +D+AY+IHT++G+    AKVNG
Sbjct: 368 ESDSREFMRSLKFDLFKEEVYVFTPRGEVKELPEGASPIDFAYLIHTKVGDHCSGAKVNG 427

Query: 606 NLVSPTHVLANAEVVEIIT 624
            LV  +  L N + VEIIT
Sbjct: 428 KLVPLSTKLHNGDTVEIIT 446


>gi|225871285|ref|YP_002747232.1| GTP pyrophosphokinase [Streptococcus equi subsp. equi 4047]
 gi|225700689|emb|CAW95287.1| GTP pyrophosphokinase [Streptococcus equi subsp. equi 4047]
          Length = 739

 Score =  324 bits (830), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 182/491 (37%), Positives = 290/491 (59%), Gaps = 49/491 (9%)

Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
           Y++  ++ELV++AL  A  AH  Q R+SGEP+I+HP++VA IL +L LD  ++  G LHD
Sbjct: 19  YMTDGDVELVQKALDYATAAHFYQVRKSGEPYIVHPIQVAAILADLHLDAVTVVCGFLHD 78

Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
            VEDT++ T E IE +FG  VR IV+G   V+KLGK++ K+    +    A++ R+M +A
Sbjct: 79  VVEDTDI-TLEDIEFDFGKDVRDIVDG---VTKLGKVEYKSHEEQL----AENHRKMLMA 130

Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
           M++++RVI+VKLADRLHNMRTL H+   KQ  I+ ET++++APLA  LG+ +IK ELE+L
Sbjct: 131 MSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELEDL 190

Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
           +F Y N  ++ K    ++ + +E  +E E     ++ KI+   +     +  ++    K 
Sbjct: 191 AFRYLNEIEFYK----ISHMMREKRREREALVDDIVTKIK--AYTTDQGLYGDVYGRPKH 244

Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
            YS+Y+ +   +   +++  +  +R +++             Q   Y ++G +H +W P+
Sbjct: 245 IYSVYRKMRDKKKRFDQIFDLIAIRCVME------------TQSDVYAMVGYIHELWRPM 292

Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
           P   KDYIA PK NGYQS+HTT    +Y     +E+QIRT+EM  +AE G+AAH++ +  
Sbjct: 293 PGRFKDYIAAPKTNGYQSIHTT----VYGPKGPIEIQIRTKEMHQVAEYGVAAHWAYK-- 346

Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
                       +  RGK   +N     + ++W+  + E Q     N  ++ FVD++  D
Sbjct: 347 ------------KGIRGK---VNQVEQKVGMNWIKELVELQA--ASNGDAKGFVDSVKED 389

Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
           +   R++VFTP G ++ LPK +  +D+AY +HT++G K   AKVNG +V  T  L   +V
Sbjct: 390 IFSERIYVFTPTGAVQELPKDSGPIDFAYAVHTQVGEKATGAKVNGRMVPLTAKLKTGDV 449

Query: 620 VEIITYNVSFS 630
           VEI+T   SF 
Sbjct: 450 VEIVTNPNSFG 460


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.319    0.134    0.396 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,657,033,767
Number of Sequences: 23463169
Number of extensions: 403700965
Number of successful extensions: 1078555
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5614
Number of HSP's successfully gapped in prelim test: 1351
Number of HSP's that attempted gapping in prelim test: 1043243
Number of HSP's gapped (non-prelim): 8024
length of query: 635
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 486
effective length of database: 8,863,183,186
effective search space: 4307507028396
effective search space used: 4307507028396
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 80 (35.4 bits)