Query 006689
Match_columns 635
No_of_seqs 488 out of 3116
Neff 5.4
Searched_HMMs 29240
Date Mon Mar 25 06:20:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006689.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006689hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3nva_A CTP synthase; rossman f 100.0 1E-193 3E-198 1580.3 38.9 525 34-582 1-534 (535)
2 1vco_A CTP synthetase; tetrame 100.0 5E-160 2E-164 1329.7 38.7 523 36-583 12-546 (550)
3 1s1m_A CTP synthase; CTP synth 100.0 5E-158 2E-162 1312.9 39.4 523 34-584 1-540 (545)
4 2c5m_A CTP synthase; cytidine 100.0 2E-138 6E-143 1042.5 18.7 266 36-306 23-294 (294)
5 2vo1_A CTP synthase 1; pyrimid 100.0 2E-136 7E-141 1035.3 17.2 269 34-307 21-295 (295)
6 2v4u_A CTP synthase 2; pyrimid 100.0 1.1E-48 3.8E-53 405.7 22.6 276 316-592 10-286 (289)
7 2w7t_A CTP synthetase, putativ 100.0 9.3E-46 3.2E-50 380.7 19.8 251 332-591 9-265 (273)
8 1a9x_B Carbamoyl phosphate syn 100.0 1.3E-40 4.4E-45 357.1 14.2 291 214-582 53-375 (379)
9 3fij_A LIN1909 protein; 11172J 99.9 3E-27 1E-31 240.1 17.4 208 332-583 5-243 (254)
10 2a9v_A GMP synthase; structura 99.9 6E-25 2.1E-29 217.6 16.8 189 330-583 12-202 (212)
11 1qdl_B Protein (anthranilate s 99.9 2.4E-24 8.3E-29 209.9 18.5 181 334-578 4-193 (195)
12 4gud_A Imidazole glycerol phos 99.9 2.5E-25 8.4E-30 218.2 10.7 199 333-583 4-207 (211)
13 1wl8_A GMP synthase [glutamine 99.9 4.2E-24 1.4E-28 206.6 17.0 183 333-581 2-187 (189)
14 2vpi_A GMP synthase; guanine m 99.9 2E-24 6.7E-29 215.2 11.1 185 332-580 25-210 (218)
15 3uow_A GMP synthetase; structu 99.9 2.1E-23 7.3E-28 233.8 15.6 213 332-587 8-236 (556)
16 1l9x_A Gamma-glutamyl hydrolas 99.9 1.3E-23 4.3E-28 220.3 12.4 206 331-585 30-281 (315)
17 1i1q_B Anthranilate synthase c 99.9 2.5E-22 8.5E-27 195.0 19.3 188 332-581 1-190 (192)
18 3tqi_A GMP synthase [glutamine 99.9 2.9E-23 9.7E-28 231.4 11.9 194 332-587 11-211 (527)
19 2ywj_A Glutamine amidotransfer 99.9 8.2E-23 2.8E-27 196.8 12.9 183 332-582 1-185 (186)
20 3r75_A Anthranilate/para-amino 99.9 5.2E-23 1.8E-27 234.0 13.4 182 331-583 446-636 (645)
21 1o1y_A Conserved hypothetical 99.9 5.5E-22 1.9E-26 199.9 17.2 189 325-582 6-202 (239)
22 1gpm_A GMP synthetase, XMP ami 99.9 8.5E-23 2.9E-27 227.5 10.7 191 332-583 8-204 (525)
23 3d54_D Phosphoribosylformylgly 99.9 4.6E-21 1.6E-25 187.4 17.4 186 332-580 3-211 (213)
24 2ywb_A GMP synthase [glutamine 99.9 2.7E-22 9.3E-27 222.3 9.2 180 334-580 2-184 (503)
25 1gpw_B Amidotransferase HISH; 99.9 7.2E-22 2.5E-26 192.4 9.1 184 332-582 1-199 (201)
26 3l7n_A Putative uncharacterize 99.8 3.3E-20 1.1E-24 186.1 18.3 184 332-583 1-197 (236)
27 3m3p_A Glutamine amido transfe 99.8 7.8E-20 2.7E-24 186.0 17.5 182 332-582 4-193 (250)
28 2vxo_A GMP synthase [glutamine 99.8 1.5E-20 5.3E-25 215.4 9.4 180 332-578 30-212 (697)
29 2ywd_A Glutamine amidotransfer 99.8 1.5E-19 5.1E-24 174.0 14.3 181 332-581 3-190 (191)
30 1q7r_A Predicted amidotransfer 99.8 5.1E-20 1.7E-24 182.6 11.2 186 330-583 22-212 (219)
31 2nv0_A Glutamine amidotransfer 99.8 1E-19 3.4E-24 176.6 12.9 185 332-584 2-191 (196)
32 1ka9_H Imidazole glycerol phos 99.8 4.3E-20 1.5E-24 180.1 9.0 184 332-580 3-200 (200)
33 2iss_D Glutamine amidotransfer 99.8 4.2E-19 1.4E-23 174.5 11.1 186 328-580 17-207 (208)
34 2abw_A PDX2 protein, glutamina 99.7 2E-17 7E-22 164.2 12.1 198 331-584 3-217 (227)
35 1jvn_A Glutamine, bifunctional 99.6 6.4E-17 2.2E-21 181.4 4.9 197 332-580 5-215 (555)
36 2h2w_A Homoserine O-succinyltr 99.4 1.4E-12 4.6E-17 136.8 15.5 195 330-565 46-252 (312)
37 2vdj_A Homoserine O-succinyltr 99.4 3.3E-12 1.1E-16 133.3 17.2 136 394-565 97-241 (301)
38 3ugj_A Phosphoribosylformylgly 98.8 2E-08 7E-13 121.8 15.8 196 331-566 1047-1275(1303)
39 1fy2_A Aspartyl dipeptidase; s 98.3 3.8E-07 1.3E-11 91.2 4.4 88 331-439 31-127 (229)
40 3l4e_A Uncharacterized peptida 98.3 1.1E-06 3.7E-11 86.9 6.9 90 331-439 27-127 (206)
41 1oi4_A Hypothetical protein YH 97.5 0.0003 1E-08 67.8 9.0 101 330-440 22-133 (193)
42 3l18_A Intracellular protease 97.0 0.0019 6.5E-08 60.2 8.6 100 331-439 2-109 (168)
43 2vrn_A Protease I, DR1199; cys 96.1 0.021 7.1E-07 54.2 9.4 100 331-440 9-123 (190)
44 2rk3_A Protein DJ-1; parkinson 95.9 0.011 3.7E-07 56.7 6.6 100 332-439 4-113 (197)
45 2ab0_A YAJL; DJ-1/THIJ superfa 95.6 0.014 4.6E-07 56.6 6.0 100 333-439 4-114 (205)
46 4hcj_A THIJ/PFPI domain protei 95.6 0.0096 3.3E-07 57.1 4.8 45 395-439 68-115 (177)
47 3er6_A Putative transcriptiona 95.5 0.025 8.5E-07 55.1 7.2 105 330-440 7-123 (209)
48 4e08_A DJ-1 beta; flavodoxin-l 95.3 0.037 1.3E-06 52.7 7.8 98 332-439 6-114 (190)
49 3l3b_A ES1 family protein; ssg 94.9 0.018 6.2E-07 57.9 4.3 47 395-441 106-167 (242)
50 3cne_A Putative protease I; st 94.5 0.026 8.9E-07 52.9 4.2 46 395-440 65-119 (175)
51 1vhq_A Enhancing lycopene bios 94.4 0.027 9.3E-07 55.6 4.2 47 395-441 89-149 (232)
52 3f5d_A Protein YDEA; unknow pr 94.3 0.057 1.9E-06 52.7 6.3 45 395-439 62-107 (206)
53 3uk7_A Class I glutamine amido 94.3 0.1 3.4E-06 55.4 8.6 46 395-440 281-329 (396)
54 2fex_A Conserved hypothetical 94.2 0.023 8E-07 54.0 3.2 44 396-439 63-108 (188)
55 3efe_A THIJ/PFPI family protei 94.0 0.065 2.2E-06 52.2 6.0 45 395-439 73-119 (212)
56 1u9c_A APC35852; structural ge 94.0 0.039 1.3E-06 53.7 4.3 45 395-439 88-136 (224)
57 3ej6_A Catalase-3; heme, hydro 93.8 0.25 8.5E-06 56.7 11.1 96 331-439 537-644 (688)
58 3gra_A Transcriptional regulat 93.7 0.082 2.8E-06 51.2 6.0 47 394-440 69-116 (202)
59 3fse_A Two-domain protein cont 93.7 0.14 4.9E-06 54.5 8.3 102 330-439 9-119 (365)
60 3ttv_A Catalase HPII; heme ori 93.0 0.11 3.7E-06 60.1 6.3 102 331-439 600-706 (753)
61 1rw7_A YDR533CP; alpha-beta sa 92.8 0.042 1.4E-06 54.7 2.4 45 395-439 97-145 (243)
62 3en0_A Cyanophycinase; serine 92.8 0.18 6.1E-06 52.2 7.2 109 315-439 42-159 (291)
63 3n7t_A Macrophage binding prot 92.6 0.056 1.9E-06 54.5 3.1 45 395-439 104-152 (247)
64 3noq_A THIJ/PFPI family protei 92.4 0.11 3.9E-06 51.4 5.0 46 394-439 63-111 (231)
65 2iuf_A Catalase; oxidoreductas 92.4 0.22 7.7E-06 57.1 8.0 96 331-439 529-646 (688)
66 3kkl_A Probable chaperone prot 92.3 0.063 2.2E-06 53.9 3.0 45 395-439 97-145 (244)
67 4dzz_A Plasmid partitioning pr 91.2 0.25 8.6E-06 46.2 5.6 83 36-187 1-89 (206)
68 3qxc_A Dethiobiotin synthetase 90.9 0.46 1.6E-05 47.6 7.6 163 34-253 19-199 (242)
69 3mgk_A Intracellular protease/ 90.8 0.11 3.7E-06 50.7 2.7 45 395-439 64-111 (211)
70 1n57_A Chaperone HSP31, protei 90.3 0.11 3.7E-06 53.5 2.4 46 394-439 143-192 (291)
71 3uk7_A Class I glutamine amido 90.1 0.21 7.3E-06 52.9 4.5 46 395-440 88-136 (396)
72 4gdh_A DJ-1, uncharacterized p 89.9 0.28 9.6E-06 47.1 4.7 103 331-438 4-120 (194)
73 3ot1_A 4-methyl-5(B-hydroxyeth 89.8 0.096 3.3E-06 50.8 1.4 98 332-439 10-119 (208)
74 3ewn_A THIJ/PFPI family protei 89.1 0.25 8.6E-06 49.8 3.9 44 396-439 84-131 (253)
75 1sy7_A Catalase 1; heme oxidat 88.4 0.65 2.2E-05 53.6 7.2 100 332-441 535-644 (715)
76 2xxa_A Signal recognition part 84.3 7.2 0.00025 42.2 12.3 38 34-78 98-142 (433)
77 1hyq_A MIND, cell division inh 83.3 3.6 0.00012 40.0 8.8 35 36-76 2-42 (263)
78 3of5_A Dethiobiotin synthetase 83.1 1.3 4.4E-05 43.6 5.4 163 35-252 3-178 (228)
79 1xjc_A MOBB protein homolog; s 82.9 0.85 2.9E-05 43.3 3.8 39 35-80 3-48 (169)
80 1z0s_A Probable inorganic poly 80.6 1.1 3.6E-05 46.2 3.8 72 331-434 29-100 (278)
81 3fgn_A Dethiobiotin synthetase 80.5 2.1 7E-05 43.1 5.8 33 34-72 24-62 (251)
82 3ea0_A ATPase, para family; al 78.7 3 0.0001 40.0 6.2 36 35-76 3-45 (245)
83 3dm5_A SRP54, signal recogniti 78.1 20 0.0007 38.9 13.1 36 35-77 99-140 (443)
84 3bhn_A THIJ/PFPI domain protei 73.8 0.83 2.8E-05 45.5 0.7 44 394-439 78-126 (236)
85 3kl4_A SRP54, signal recogniti 72.8 27 0.00093 37.8 12.4 35 35-76 96-136 (433)
86 3pfn_A NAD kinase; structural 72.4 3.6 0.00012 43.8 5.2 94 332-434 39-141 (365)
87 2xj4_A MIPZ; replication, cell 71.5 12 0.00039 37.4 8.5 35 36-76 4-44 (286)
88 3guy_A Short-chain dehydrogena 69.8 2.2 7.7E-05 40.8 2.7 33 36-74 1-34 (230)
89 3l6e_A Oxidoreductase, short-c 67.4 3.5 0.00012 39.9 3.6 34 34-73 1-35 (235)
90 3cio_A ETK, tyrosine-protein k 66.1 10 0.00035 38.5 6.9 149 35-252 103-275 (299)
91 1zmt_A Haloalcohol dehalogenas 65.8 4.3 0.00015 39.6 3.9 31 36-72 1-32 (254)
92 1fjh_A 3alpha-hydroxysteroid d 65.5 4.7 0.00016 38.9 4.1 33 36-74 1-34 (257)
93 1g0o_A Trihydroxynaphthalene r 65.3 6.5 0.00022 38.9 5.1 32 34-71 27-59 (283)
94 2c07_A 3-oxoacyl-(acyl-carrier 65.1 4.9 0.00017 39.9 4.2 34 33-72 41-75 (285)
95 3ius_A Uncharacterized conserv 64.3 4.4 0.00015 39.6 3.6 35 33-75 3-38 (286)
96 3rft_A Uronate dehydrogenase; 64.2 3.7 0.00013 40.3 3.1 36 34-75 1-37 (267)
97 1ooe_A Dihydropteridine reduct 64.0 5.8 0.0002 38.0 4.4 36 34-75 1-37 (236)
98 1u0t_A Inorganic polyphosphate 63.7 7.2 0.00025 39.9 5.3 94 332-434 5-108 (307)
99 3l77_A Short-chain alcohol deh 63.7 4.9 0.00017 38.4 3.8 32 36-73 2-34 (235)
100 4iiu_A 3-oxoacyl-[acyl-carrier 63.6 5 0.00017 39.3 3.9 32 33-70 23-55 (267)
101 3qvo_A NMRA family protein; st 63.3 5.3 0.00018 38.3 3.9 39 31-75 18-58 (236)
102 1yo6_A Putative carbonyl reduc 62.9 5.9 0.0002 37.6 4.2 35 34-74 1-38 (250)
103 3vtz_A Glucose 1-dehydrogenase 62.2 6.7 0.00023 38.8 4.5 36 33-74 11-47 (269)
104 3i1j_A Oxidoreductase, short c 61.9 6.1 0.00021 37.9 4.1 34 34-73 12-46 (247)
105 4dmm_A 3-oxoacyl-[acyl-carrier 61.7 6.3 0.00021 39.0 4.2 31 34-70 26-57 (269)
106 2dkn_A 3-alpha-hydroxysteroid 61.6 6 0.00021 37.6 4.0 33 36-74 1-34 (255)
107 3h7a_A Short chain dehydrogena 61.4 6.6 0.00023 38.4 4.3 34 34-73 5-39 (252)
108 2hq1_A Glucose/ribitol dehydro 60.9 7.4 0.00025 37.2 4.5 31 35-71 4-35 (247)
109 3cxt_A Dehydrogenase with diff 60.8 6.9 0.00024 39.3 4.4 32 34-71 32-64 (291)
110 3ksm_A ABC-type sugar transpor 60.7 27 0.00093 33.2 8.5 86 332-431 1-90 (276)
111 3orf_A Dihydropteridine reduct 60.5 6.5 0.00022 38.2 4.1 34 36-75 22-56 (251)
112 3ijr_A Oxidoreductase, short c 59.8 9 0.00031 38.3 5.0 33 35-73 46-79 (291)
113 2ph3_A 3-oxoacyl-[acyl carrier 59.5 5.9 0.0002 37.7 3.5 30 36-71 1-31 (245)
114 4imr_A 3-oxoacyl-(acyl-carrier 59.1 7.9 0.00027 38.4 4.5 32 34-71 31-63 (275)
115 3imf_A Short chain dehydrogena 59.1 7.1 0.00024 38.1 4.1 34 33-72 3-37 (257)
116 3gbv_A Putative LACI-family tr 59.0 44 0.0015 32.2 9.8 91 330-432 7-101 (304)
117 3i4f_A 3-oxoacyl-[acyl-carrier 58.9 6.9 0.00023 38.0 3.9 31 35-71 6-37 (264)
118 1yxm_A Pecra, peroxisomal tran 58.8 8.2 0.00028 38.3 4.5 35 32-72 14-49 (303)
119 3tfo_A Putative 3-oxoacyl-(acy 58.7 6.8 0.00023 38.9 3.9 34 35-74 3-37 (264)
120 3uce_A Dehydrogenase; rossmann 58.5 6.7 0.00023 37.3 3.7 34 35-74 5-39 (223)
121 1e7w_A Pteridine reductase; di 58.4 6.9 0.00024 39.1 3.9 32 34-71 7-39 (291)
122 3end_A Light-independent proto 58.4 8 0.00027 38.7 4.4 38 35-79 40-83 (307)
123 3ezl_A Acetoacetyl-COA reducta 58.3 7.2 0.00024 37.7 3.9 31 34-70 11-42 (256)
124 3v2h_A D-beta-hydroxybutyrate 58.2 7.6 0.00026 38.7 4.1 32 33-70 22-54 (281)
125 2jah_A Clavulanic acid dehydro 58.1 7.7 0.00026 37.7 4.1 33 34-72 5-38 (247)
126 2qq5_A DHRS1, dehydrogenase/re 58.0 7.7 0.00026 37.8 4.1 33 34-72 3-36 (260)
127 1eiw_A Hypothetical protein MT 57.6 6.3 0.00021 35.0 3.0 39 393-431 35-73 (111)
128 2uvd_A 3-oxoacyl-(acyl-carrier 57.4 8.2 0.00028 37.3 4.2 31 35-71 3-34 (246)
129 3tpc_A Short chain alcohol deh 57.1 9.2 0.00031 37.2 4.5 33 35-73 6-39 (257)
130 2d1y_A Hypothetical protein TT 57.0 9.1 0.00031 37.2 4.4 35 34-74 4-39 (256)
131 2ew8_A (S)-1-phenylethanol deh 56.9 9.2 0.00032 37.0 4.4 34 34-73 5-39 (249)
132 3rwb_A TPLDH, pyridoxal 4-dehy 56.9 8.2 0.00028 37.5 4.1 32 34-71 4-36 (247)
133 2dtx_A Glucose 1-dehydrogenase 56.9 8.1 0.00028 38.0 4.1 36 34-75 6-42 (264)
134 2ae2_A Protein (tropinone redu 56.7 8.1 0.00028 37.6 4.0 34 34-73 7-41 (260)
135 1mxh_A Pteridine reductase 2; 56.7 7.5 0.00026 38.1 3.8 32 34-71 9-41 (276)
136 1vl8_A Gluconate 5-dehydrogena 56.6 8.3 0.00028 38.0 4.1 33 34-72 19-52 (267)
137 3r6d_A NAD-dependent epimerase 56.5 8.7 0.0003 36.1 4.1 35 34-74 3-39 (221)
138 2an1_A Putative kinase; struct 56.2 12 0.00041 37.6 5.3 89 332-434 6-96 (292)
139 3awd_A GOX2181, putative polyo 56.2 8.4 0.00029 37.1 4.0 32 34-71 11-43 (260)
140 2o23_A HADH2 protein; HSD17B10 56.0 9.8 0.00033 36.7 4.4 34 34-73 10-44 (265)
141 1uzm_A 3-oxoacyl-[acyl-carrier 55.9 10 0.00035 36.8 4.5 35 34-74 13-48 (247)
142 2q2v_A Beta-D-hydroxybutyrate 55.7 10 0.00035 36.8 4.5 32 34-71 2-34 (255)
143 1sby_A Alcohol dehydrogenase; 55.6 9.3 0.00032 36.9 4.2 33 34-72 3-37 (254)
144 3lyl_A 3-oxoacyl-(acyl-carrier 55.6 8.8 0.0003 36.8 4.0 32 35-72 4-36 (247)
145 1h5q_A NADP-dependent mannitol 55.6 9.5 0.00033 36.7 4.3 32 34-71 12-44 (265)
146 1zk4_A R-specific alcohol dehy 55.4 9.1 0.00031 36.6 4.1 34 34-73 4-38 (251)
147 3ai3_A NADPH-sorbose reductase 55.4 8.8 0.0003 37.4 4.0 33 34-72 5-38 (263)
148 1spx_A Short-chain reductase f 55.4 8.9 0.0003 37.6 4.1 34 34-73 4-38 (278)
149 3gk3_A Acetoacetyl-COA reducta 55.3 8.2 0.00028 37.9 3.8 29 36-70 25-54 (269)
150 3f9i_A 3-oxoacyl-[acyl-carrier 55.3 9.4 0.00032 36.7 4.1 32 35-72 13-45 (249)
151 4e3z_A Putative oxidoreductase 55.2 9 0.00031 37.6 4.1 30 35-70 25-55 (272)
152 3icc_A Putative 3-oxoacyl-(acy 55.1 9.1 0.00031 36.8 4.0 30 35-70 6-36 (255)
153 1xq1_A Putative tropinone redu 55.1 8.9 0.0003 37.2 4.0 33 35-73 13-46 (266)
154 3m1a_A Putative dehydrogenase; 55.1 9.2 0.00031 37.6 4.1 32 35-72 4-36 (281)
155 3p19_A BFPVVD8, putative blue 55.0 7.8 0.00027 38.3 3.6 32 35-72 15-47 (266)
156 2fwm_X 2,3-dihydro-2,3-dihydro 55.0 10 0.00036 36.7 4.4 34 35-74 6-40 (250)
157 2pnf_A 3-oxoacyl-[acyl-carrier 54.9 9.3 0.00032 36.4 4.0 33 34-72 5-38 (248)
158 1x1t_A D(-)-3-hydroxybutyrate 54.9 10 0.00035 36.9 4.4 32 35-72 3-35 (260)
159 3ioy_A Short-chain dehydrogena 54.9 9.5 0.00032 38.8 4.3 33 35-73 7-40 (319)
160 3s55_A Putative short-chain de 54.9 9.5 0.00033 37.6 4.2 34 35-74 9-43 (281)
161 3rd5_A Mypaa.01249.C; ssgcid, 54.8 9.2 0.00031 38.0 4.1 35 34-74 14-49 (291)
162 3uf0_A Short-chain dehydrogena 54.7 9.9 0.00034 37.7 4.3 32 34-71 29-61 (273)
163 3ksu_A 3-oxoacyl-acyl carrier 54.6 9.1 0.00031 37.6 4.0 32 34-71 9-41 (262)
164 2ffh_A Protein (FFH); SRP54, s 54.6 74 0.0025 34.2 11.4 36 35-77 97-138 (425)
165 1iy8_A Levodione reductase; ox 54.6 9.1 0.00031 37.4 4.0 33 34-72 11-44 (267)
166 3un1_A Probable oxidoreductase 54.6 6.3 0.00022 38.8 2.8 34 35-74 27-61 (260)
167 1zmo_A Halohydrin dehalogenase 54.5 8.8 0.0003 37.1 3.8 30 36-71 1-31 (244)
168 3fkq_A NTRC-like two-domain pr 54.4 43 0.0015 34.7 9.4 40 34-79 141-186 (373)
169 2wsb_A Galactitol dehydrogenas 54.4 9.4 0.00032 36.6 4.0 32 35-72 10-42 (254)
170 2ag5_A DHRS6, dehydrogenase/re 54.3 9.7 0.00033 36.7 4.1 35 34-74 4-39 (246)
171 3ek2_A Enoyl-(acyl-carrier-pro 54.1 12 0.0004 36.2 4.7 34 33-71 11-46 (271)
172 3tzq_B Short-chain type dehydr 54.0 11 0.00038 37.1 4.5 34 34-73 9-43 (271)
173 3o26_A Salutaridine reductase; 54.0 8.4 0.00029 37.9 3.6 33 35-73 11-44 (311)
174 3oid_A Enoyl-[acyl-carrier-pro 54.0 9.3 0.00032 37.4 3.9 30 35-70 3-33 (258)
175 4fyk_A Deoxyribonucleoside 5'- 53.9 33 0.0011 32.1 7.4 94 332-433 3-102 (152)
176 3e03_A Short chain dehydrogena 53.9 11 0.00037 37.2 4.4 33 34-72 4-37 (274)
177 1hdc_A 3-alpha, 20 beta-hydrox 53.9 9.8 0.00033 37.0 4.1 32 34-71 3-35 (254)
178 3pxx_A Carveol dehydrogenase; 53.8 9.9 0.00034 37.3 4.1 34 35-74 9-43 (287)
179 1gee_A Glucose 1-dehydrogenase 53.7 9 0.00031 37.0 3.7 32 34-71 5-37 (261)
180 3op4_A 3-oxoacyl-[acyl-carrier 53.7 9.9 0.00034 36.9 4.0 31 35-71 8-39 (248)
181 1o5i_A 3-oxoacyl-(acyl carrier 53.7 9.8 0.00033 37.0 4.0 36 34-75 17-53 (249)
182 3rkr_A Short chain oxidoreduct 53.6 10 0.00034 37.1 4.1 32 35-72 28-60 (262)
183 3osu_A 3-oxoacyl-[acyl-carrier 53.5 10 0.00035 36.6 4.1 30 35-70 3-33 (246)
184 3pk0_A Short-chain dehydrogena 53.3 9.9 0.00034 37.3 4.0 33 35-73 9-42 (262)
185 2nm0_A Probable 3-oxacyl-(acyl 53.2 11 0.00037 37.0 4.2 35 34-74 19-54 (253)
186 3gvc_A Oxidoreductase, probabl 53.2 10 0.00036 37.7 4.2 32 35-72 28-60 (277)
187 4da9_A Short-chain dehydrogena 53.1 11 0.00037 37.5 4.3 30 36-71 29-59 (280)
188 2rhc_B Actinorhodin polyketide 53.1 9.9 0.00034 37.6 4.0 33 35-73 21-54 (277)
189 4iin_A 3-ketoacyl-acyl carrier 53.1 10 0.00036 37.2 4.1 31 35-71 28-59 (271)
190 3ctm_A Carbonyl reductase; alc 53.0 10 0.00036 37.0 4.1 33 34-72 32-65 (279)
191 3llv_A Exopolyphosphatase-rela 52.9 7 0.00024 34.3 2.6 33 36-75 6-39 (141)
192 2nwq_A Probable short-chain de 52.8 9.7 0.00033 37.8 3.9 36 32-74 18-54 (272)
193 1uls_A Putative 3-oxoacyl-acyl 52.7 10 0.00035 36.7 4.0 33 35-73 4-37 (245)
194 3f1l_A Uncharacterized oxidore 52.7 10 0.00036 36.8 4.1 32 35-72 11-43 (252)
195 3sx2_A Putative 3-ketoacyl-(ac 52.6 11 0.00036 37.1 4.1 34 34-73 11-45 (278)
196 2z1n_A Dehydrogenase; reductas 52.6 10 0.00035 36.9 4.0 33 34-72 5-38 (260)
197 3qiv_A Short-chain dehydrogena 52.6 10 0.00035 36.5 3.9 32 35-72 8-40 (253)
198 1hxh_A 3BETA/17BETA-hydroxyste 52.5 11 0.00037 36.7 4.1 32 34-71 4-36 (253)
199 3lf2_A Short chain oxidoreduct 52.4 10 0.00036 37.1 4.0 34 34-73 6-40 (265)
200 2pd6_A Estradiol 17-beta-dehyd 52.3 11 0.00038 36.3 4.1 33 34-72 5-38 (264)
201 2bgk_A Rhizome secoisolaricire 52.2 10 0.00036 36.8 4.0 32 34-71 14-46 (278)
202 3nyw_A Putative oxidoreductase 52.1 8.3 0.00028 37.6 3.2 34 34-73 5-39 (250)
203 4dqx_A Probable oxidoreductase 52.0 10 0.00036 37.6 4.0 32 35-72 26-58 (277)
204 4fc7_A Peroxisomal 2,4-dienoyl 52.0 12 0.00041 37.0 4.4 32 34-71 25-57 (277)
205 3uxy_A Short-chain dehydrogena 52.0 11 0.00039 37.1 4.2 32 35-72 27-59 (266)
206 2zat_A Dehydrogenase/reductase 52.0 11 0.00038 36.6 4.1 34 33-72 11-45 (260)
207 3tsc_A Putative oxidoreductase 51.9 11 0.00038 37.1 4.1 32 35-72 10-42 (277)
208 3n74_A 3-ketoacyl-(acyl-carrie 51.9 11 0.00036 36.6 3.9 33 35-73 8-41 (261)
209 2p91_A Enoyl-[acyl-carrier-pro 51.9 14 0.00047 36.5 4.8 34 34-72 19-54 (285)
210 4e6p_A Probable sorbitol dehyd 51.9 11 0.00037 36.8 4.0 32 35-72 7-39 (259)
211 3sho_A Transcriptional regulat 51.8 1.1E+02 0.0037 27.9 10.8 94 315-433 26-122 (187)
212 3ic5_A Putative saccharopine d 51.8 14 0.00047 30.7 4.1 33 36-75 5-39 (118)
213 3ak4_A NADH-dependent quinucli 51.6 11 0.00037 36.7 4.0 33 34-72 10-43 (263)
214 3kts_A Glycerol uptake operon 51.6 13 0.00046 36.0 4.5 78 146-250 11-88 (192)
215 3tjr_A Short chain dehydrogena 51.2 11 0.00036 38.0 3.9 31 35-71 30-61 (301)
216 3dii_A Short-chain dehydrogena 51.2 10 0.00034 36.8 3.6 32 36-73 2-34 (247)
217 3ppi_A 3-hydroxyacyl-COA dehyd 51.1 9.9 0.00034 37.4 3.6 33 35-73 29-62 (281)
218 2b4q_A Rhamnolipids biosynthes 51.1 11 0.00038 37.3 4.0 32 34-71 27-59 (276)
219 1zem_A Xylitol dehydrogenase; 51.0 11 0.00038 36.7 3.9 33 34-72 5-38 (262)
220 3qlj_A Short chain dehydrogena 51.0 12 0.0004 38.0 4.2 32 35-72 26-58 (322)
221 2ekp_A 2-deoxy-D-gluconate 3-d 50.9 12 0.00041 35.9 4.1 33 36-74 2-35 (239)
222 2cfc_A 2-(R)-hydroxypropyl-COM 50.9 11 0.00037 36.1 3.7 31 36-72 2-33 (250)
223 3t4x_A Oxidoreductase, short c 50.9 11 0.00039 36.8 4.0 32 36-73 10-42 (267)
224 1ja9_A 4HNR, 1,3,6,8-tetrahydr 50.8 12 0.00041 36.2 4.1 32 34-71 19-51 (274)
225 3l49_A ABC sugar (ribose) tran 50.8 62 0.0021 31.0 9.3 86 330-431 4-92 (291)
226 3sju_A Keto reductase; short-c 50.7 9.7 0.00033 37.8 3.5 32 35-72 23-55 (279)
227 4dry_A 3-oxoacyl-[acyl-carrier 50.7 9.7 0.00033 37.9 3.5 32 35-72 32-64 (281)
228 3svt_A Short-chain type dehydr 50.7 11 0.00039 37.1 4.0 33 35-73 10-43 (281)
229 3ged_A Short-chain dehydrogena 50.7 10 0.00035 37.8 3.6 33 36-74 2-35 (247)
230 3u9l_A 3-oxoacyl-[acyl-carrier 50.6 11 0.00039 38.5 4.1 32 34-71 3-35 (324)
231 3zv4_A CIS-2,3-dihydrobiphenyl 50.6 11 0.00039 37.3 4.0 31 35-71 4-35 (281)
232 3uve_A Carveol dehydrogenase ( 50.5 12 0.00041 37.0 4.1 34 35-74 10-44 (286)
233 1ae1_A Tropinone reductase-I; 50.4 12 0.0004 36.9 4.0 33 34-72 19-52 (273)
234 3gem_A Short chain dehydrogena 50.3 9.6 0.00033 37.5 3.3 33 36-74 27-60 (260)
235 1cyd_A Carbonyl reductase; sho 50.2 12 0.00041 35.6 4.0 33 34-72 5-38 (244)
236 3k9g_A PF-32 protein; ssgcid, 50.2 12 0.00042 36.4 4.1 41 35-78 26-68 (267)
237 3afn_B Carbonyl reductase; alp 50.2 12 0.00041 35.7 4.0 33 34-72 5-38 (258)
238 3is3_A 17BETA-hydroxysteroid d 50.1 13 0.00044 36.6 4.2 31 34-70 16-47 (270)
239 2qhx_A Pteridine reductase 1; 50.0 11 0.00038 38.5 3.9 31 35-71 45-76 (328)
240 3r1i_A Short-chain type dehydr 49.9 13 0.00045 36.8 4.4 32 34-71 30-62 (276)
241 4ibo_A Gluconate dehydrogenase 49.8 12 0.00042 37.0 4.1 32 34-71 24-56 (271)
242 1yb1_A 17-beta-hydroxysteroid 49.8 12 0.00041 36.7 4.0 34 34-73 29-63 (272)
243 3v8b_A Putative dehydrogenase, 49.6 11 0.00039 37.5 3.8 31 36-72 28-59 (283)
244 4eso_A Putative oxidoreductase 49.6 13 0.00043 36.4 4.1 33 35-73 7-40 (255)
245 1fmc_A 7 alpha-hydroxysteroid 49.4 12 0.00042 35.7 3.9 33 34-72 9-42 (255)
246 1sny_A Sniffer CG10964-PA; alp 49.4 13 0.00044 36.0 4.1 35 34-74 19-57 (267)
247 1yde_A Retinal dehydrogenase/r 49.4 12 0.00042 36.8 4.0 34 34-73 7-41 (270)
248 2x9g_A PTR1, pteridine reducta 49.4 11 0.00036 37.4 3.6 34 34-73 21-55 (288)
249 3edm_A Short chain dehydrogena 49.3 13 0.00044 36.3 4.1 32 34-71 6-38 (259)
250 3t7c_A Carveol dehydrogenase; 49.2 13 0.00043 37.3 4.1 35 35-75 27-62 (299)
251 1nff_A Putative oxidoreductase 49.2 12 0.00042 36.5 3.9 33 34-72 5-38 (260)
252 3d3w_A L-xylulose reductase; u 49.1 13 0.00044 35.4 4.0 33 35-73 6-39 (244)
253 3rih_A Short chain dehydrogena 49.1 14 0.00047 37.2 4.4 34 35-74 40-74 (293)
254 3sc4_A Short chain dehydrogena 49.1 14 0.00047 36.7 4.4 34 35-74 8-42 (285)
255 3tox_A Short chain dehydrogena 49.0 12 0.00042 37.2 4.0 33 35-73 7-40 (280)
256 3tl3_A Short-chain type dehydr 48.7 9.3 0.00032 37.2 2.9 31 35-71 8-39 (257)
257 3asu_A Short-chain dehydrogena 48.6 12 0.00042 36.3 3.8 30 37-72 1-31 (248)
258 3ftp_A 3-oxoacyl-[acyl-carrier 48.5 13 0.00044 36.8 4.0 31 35-71 27-58 (270)
259 1uay_A Type II 3-hydroxyacyl-C 48.4 11 0.00038 35.6 3.4 34 36-75 2-36 (242)
260 1xu9_A Corticosteroid 11-beta- 48.4 13 0.00043 36.8 3.9 34 34-73 26-60 (286)
261 4b4o_A Epimerase family protei 48.4 13 0.00045 36.6 4.0 33 36-75 1-34 (298)
262 3nrc_A Enoyl-[acyl-carrier-pro 48.3 18 0.0006 35.7 4.9 34 36-74 26-61 (280)
263 3h2s_A Putative NADH-flavin re 48.2 12 0.00041 34.9 3.5 33 36-75 1-34 (224)
264 2i2c_A Probable inorganic poly 48.1 8.4 0.00029 38.7 2.6 35 396-435 35-71 (272)
265 3ew7_A LMO0794 protein; Q8Y8U8 48.1 14 0.00048 34.2 4.0 33 36-75 1-34 (221)
266 3ff4_A Uncharacterized protein 48.1 15 0.00053 32.7 4.0 38 395-438 81-118 (122)
267 2a4k_A 3-oxoacyl-[acyl carrier 48.1 13 0.00045 36.5 4.0 33 34-72 4-37 (263)
268 3pgx_A Carveol dehydrogenase; 47.9 14 0.00047 36.4 4.1 33 35-73 14-47 (280)
269 1xhl_A Short-chain dehydrogena 47.8 13 0.00045 37.2 4.0 33 35-73 25-58 (297)
270 1xg5_A ARPG836; short chain de 47.8 12 0.0004 36.9 3.5 33 35-73 31-64 (279)
271 3v2g_A 3-oxoacyl-[acyl-carrier 47.6 14 0.00048 36.5 4.1 32 34-71 29-61 (271)
272 1xkq_A Short-chain reductase f 47.5 14 0.00047 36.5 4.0 33 34-72 4-37 (280)
273 1dhr_A Dihydropteridine reduct 47.5 15 0.0005 35.3 4.1 35 35-75 6-41 (241)
274 2ptg_A Enoyl-acyl carrier redu 47.3 16 0.00055 36.8 4.5 33 35-72 8-42 (319)
275 2h7i_A Enoyl-[acyl-carrier-pro 47.1 18 0.00063 35.3 4.9 33 35-72 6-40 (269)
276 1ihu_A Arsenical pump-driving 47.1 16 0.00054 40.5 4.8 37 37-79 327-369 (589)
277 3r3s_A Oxidoreductase; structu 46.9 14 0.00049 36.8 4.1 31 35-71 48-79 (294)
278 1w6u_A 2,4-dienoyl-COA reducta 46.9 14 0.00049 36.4 4.0 32 34-71 24-56 (302)
279 2gdz_A NAD+-dependent 15-hydro 46.8 14 0.00047 36.1 3.9 33 35-73 6-39 (267)
280 2o2s_A Enoyl-acyl carrier redu 46.7 16 0.00055 36.8 4.4 33 35-72 8-42 (315)
281 3grp_A 3-oxoacyl-(acyl carrier 46.7 14 0.00049 36.3 4.0 31 35-71 26-57 (266)
282 3oec_A Carveol dehydrogenase ( 46.7 15 0.00052 37.2 4.3 32 35-72 45-77 (317)
283 3ucx_A Short chain dehydrogena 46.7 16 0.00056 35.6 4.4 31 35-71 10-41 (264)
284 1u7z_A Coenzyme A biosynthesis 46.7 15 0.00051 36.4 4.1 34 34-72 6-55 (226)
285 3rot_A ABC sugar transporter, 45.5 71 0.0024 31.0 8.9 87 331-431 3-92 (297)
286 1d7o_A Enoyl-[acyl-carrier pro 45.5 18 0.00062 35.9 4.5 34 34-72 6-41 (297)
287 4egf_A L-xylulose reductase; s 45.4 15 0.00053 35.9 4.0 34 34-73 18-52 (266)
288 2pd4_A Enoyl-[acyl-carrier-pro 45.4 19 0.00067 35.2 4.7 34 34-72 4-39 (275)
289 2ehd_A Oxidoreductase, oxidore 45.4 15 0.00051 34.8 3.8 32 36-73 5-37 (234)
290 1geg_A Acetoin reductase; SDR 45.3 14 0.00048 35.8 3.6 31 36-72 2-33 (256)
291 3la6_A Tyrosine-protein kinase 45.2 84 0.0029 31.6 9.5 143 33-250 89-261 (286)
292 1gz6_A Estradiol 17 beta-dehyd 45.2 15 0.00052 37.4 4.0 32 34-71 7-39 (319)
293 3o38_A Short chain dehydrogena 44.9 18 0.00062 35.1 4.4 34 35-73 21-55 (266)
294 1edo_A Beta-keto acyl carrier 44.8 15 0.00051 34.9 3.7 28 37-70 2-30 (244)
295 4b79_A PA4098, probable short- 44.7 16 0.00054 36.4 4.0 33 36-74 11-44 (242)
296 3l6u_A ABC-type sugar transpor 44.7 83 0.0028 30.1 9.1 86 330-431 7-95 (293)
297 3gv0_A Transcriptional regulat 44.7 91 0.0031 30.1 9.5 86 330-431 7-95 (288)
298 4fn4_A Short chain dehydrogena 44.6 14 0.00048 37.0 3.5 35 33-73 4-39 (254)
299 3gdg_A Probable NADP-dependent 44.0 16 0.00055 35.4 3.8 34 33-71 17-52 (267)
300 3g1w_A Sugar ABC transporter; 44.0 92 0.0031 30.1 9.4 86 331-431 4-92 (305)
301 4g81_D Putative hexonate dehyd 43.7 14 0.00048 37.0 3.4 31 35-71 8-39 (255)
302 2gk4_A Conserved hypothetical 43.7 18 0.00061 36.1 4.1 34 36-74 3-52 (232)
303 3a28_C L-2.3-butanediol dehydr 43.7 12 0.00042 36.3 2.9 31 36-72 2-33 (258)
304 4dyv_A Short-chain dehydrogena 43.5 15 0.00052 36.4 3.6 33 35-73 27-60 (272)
305 3hp4_A GDSL-esterase; psychrot 43.2 30 0.001 31.0 5.3 75 125-209 21-104 (185)
306 8abp_A L-arabinose-binding pro 42.7 1E+02 0.0035 29.7 9.5 84 331-431 2-88 (306)
307 2g0t_A Conserved hypothetical 42.6 21 0.00073 37.6 4.7 36 35-76 168-209 (350)
308 3dqp_A Oxidoreductase YLBE; al 42.5 17 0.00057 34.1 3.6 31 39-75 3-34 (219)
309 3gaf_A 7-alpha-hydroxysteroid 42.1 15 0.00053 35.7 3.3 33 34-72 10-43 (256)
310 1g3q_A MIND ATPase, cell divis 42.1 21 0.00072 33.7 4.2 35 36-76 2-42 (237)
311 2fep_A Catabolite control prot 42.1 1.2E+02 0.0042 29.2 10.0 32 395-432 71-102 (289)
312 3gpi_A NAD-dependent epimerase 41.9 16 0.00053 35.8 3.4 34 34-74 1-35 (286)
313 1qsg_A Enoyl-[acyl-carrier-pro 41.7 24 0.00084 34.3 4.7 33 36-73 9-43 (265)
314 3oig_A Enoyl-[acyl-carrier-pro 41.6 23 0.00079 34.3 4.5 33 34-71 5-39 (266)
315 3uug_A Multiple sugar-binding 41.3 1.1E+02 0.0039 29.8 9.7 85 331-431 3-90 (330)
316 4hf7_A Putative acylhydrolase; 41.3 27 0.00093 32.6 4.8 61 152-220 63-130 (209)
317 3tb6_A Arabinose metabolism tr 41.0 1.3E+02 0.0044 28.7 9.8 37 395-432 70-106 (298)
318 3kvo_A Hydroxysteroid dehydrog 40.4 22 0.00076 36.8 4.4 33 35-73 44-77 (346)
319 3u5t_A 3-oxoacyl-[acyl-carrier 40.4 15 0.00053 36.1 3.1 29 36-70 27-56 (267)
320 3m9w_A D-xylose-binding peripl 40.0 76 0.0026 31.0 8.1 33 395-431 57-89 (313)
321 4h15_A Short chain alcohol deh 39.8 19 0.00066 35.9 3.7 32 35-72 10-42 (261)
322 3jy6_A Transcriptional regulat 39.4 1.3E+02 0.0046 28.5 9.7 84 330-432 6-92 (276)
323 2wyu_A Enoyl-[acyl carrier pro 39.2 23 0.00077 34.5 4.0 33 34-71 6-40 (261)
324 4fgs_A Probable dehydrogenase 39.1 18 0.00062 36.6 3.4 31 36-72 29-60 (273)
325 1np6_A Molybdopterin-guanine d 38.7 23 0.00077 33.3 3.8 38 36-80 6-50 (174)
326 4e4y_A Short chain dehydrogena 38.6 19 0.00066 34.5 3.4 35 35-74 3-38 (244)
327 2gk3_A Putative cytoplasmic pr 38.5 19 0.00065 35.8 3.4 72 346-431 41-124 (256)
328 3q9l_A Septum site-determining 38.0 25 0.00086 33.6 4.1 34 36-75 2-41 (260)
329 1vi6_A 30S ribosomal protein S 37.9 1.6E+02 0.0055 28.8 9.8 79 330-432 67-145 (208)
330 1xq6_A Unknown protein; struct 37.7 25 0.00085 33.1 4.0 36 34-75 2-40 (253)
331 3e8x_A Putative NAD-dependent 37.5 25 0.00085 33.3 4.0 35 35-75 20-55 (236)
332 4e5v_A Putative THUA-like prot 37.0 88 0.003 31.7 8.1 89 330-435 3-96 (281)
333 3d02_A Putative LACI-type tran 36.9 1.5E+02 0.0053 28.3 9.7 88 330-432 3-93 (303)
334 2rgy_A Transcriptional regulat 36.9 1.3E+02 0.0043 29.0 9.1 32 395-432 66-97 (290)
335 3k4h_A Putative transcriptiona 36.4 1.1E+02 0.0038 29.2 8.5 31 395-431 68-98 (292)
336 2obn_A Hypothetical protein; s 35.9 2.3E+02 0.008 29.7 11.4 79 172-255 224-311 (349)
337 3afo_A NADH kinase POS5; alpha 35.4 22 0.00075 38.0 3.4 36 395-435 113-149 (388)
338 1hdo_A Biliverdin IX beta redu 35.1 33 0.0011 31.1 4.2 33 37-75 4-37 (206)
339 4gkb_A 3-oxoacyl-[acyl-carrier 35.0 28 0.00095 34.7 4.0 31 35-71 6-37 (258)
340 2ph1_A Nucleotide-binding prot 34.9 35 0.0012 33.3 4.6 37 35-77 17-59 (262)
341 1oaa_A Sepiapterin reductase; 34.9 29 0.001 33.5 4.0 36 33-71 3-39 (259)
342 1vjn_A Zn-dependent hydrolase 34.6 41 0.0014 32.3 5.0 71 173-253 138-208 (220)
343 2x7x_A Sensor protein; transfe 34.5 2.2E+02 0.0075 27.9 10.6 85 330-431 5-93 (325)
344 2z1m_A GDP-D-mannose dehydrata 34.3 30 0.001 34.3 4.1 32 36-73 3-35 (345)
345 3fwy_A Light-independent proto 34.2 31 0.0011 35.4 4.3 39 35-80 47-91 (314)
346 3rht_A (gatase1)-like protein; 34.0 1.2E+02 0.0041 30.5 8.5 81 332-431 5-85 (259)
347 1jtv_A 17 beta-hydroxysteroid 33.9 24 0.0008 36.0 3.3 30 36-71 2-32 (327)
348 3qk7_A Transcriptional regulat 33.9 1.3E+02 0.0045 29.1 8.7 32 395-432 64-95 (294)
349 3h75_A Periplasmic sugar-bindi 33.6 50 0.0017 33.0 5.7 85 331-432 3-93 (350)
350 3bbl_A Regulatory protein of L 33.4 1.2E+02 0.0042 29.0 8.4 32 395-432 63-94 (287)
351 2qh8_A Uncharacterized protein 33.2 91 0.0031 30.6 7.4 83 332-431 141-226 (302)
352 1orr_A CDP-tyvelose-2-epimeras 33.0 28 0.00096 34.6 3.6 30 36-71 1-31 (347)
353 2hmt_A YUAA protein; RCK, KTN, 33.0 21 0.0007 30.7 2.3 33 36-75 6-39 (144)
354 3oml_A GH14720P, peroxisomal m 32.5 30 0.001 38.7 4.1 34 33-72 16-50 (613)
355 3o74_A Fructose transport syst 32.3 2.4E+02 0.0081 26.4 10.1 32 395-431 57-88 (272)
356 3cs3_A Sugar-binding transcrip 32.3 1.3E+02 0.0043 28.8 8.1 30 396-431 57-86 (277)
357 2pk3_A GDP-6-deoxy-D-LYXO-4-he 32.2 32 0.0011 33.8 3.9 35 35-75 11-46 (321)
358 3k31_A Enoyl-(acyl-carrier-pro 32.0 42 0.0014 33.5 4.7 32 35-71 29-62 (296)
359 2fn9_A Ribose ABC transporter, 32.0 2E+02 0.0068 27.4 9.5 33 395-431 57-89 (290)
360 4eyg_A Twin-arginine transloca 31.9 2.2E+02 0.0074 28.1 10.1 92 329-433 4-104 (368)
361 1wcv_1 SOJ, segregation protei 31.8 38 0.0013 32.8 4.3 39 34-78 4-48 (257)
362 3grk_A Enoyl-(acyl-carrier-pro 31.7 41 0.0014 33.5 4.6 32 35-71 30-63 (293)
363 3zq6_A Putative arsenical pump 31.6 34 0.0012 34.9 4.1 35 36-76 13-53 (324)
364 4amg_A Snogd; transferase, pol 31.4 39 0.0013 34.2 4.4 31 36-74 23-59 (400)
365 3bch_A 40S ribosomal protein S 31.3 1.9E+02 0.0064 29.2 9.3 79 330-432 103-181 (253)
366 3ko8_A NAD-dependent epimerase 31.2 36 0.0012 33.4 4.0 30 39-74 3-33 (312)
367 3lkv_A Uncharacterized conserv 30.9 78 0.0027 31.5 6.5 67 329-404 6-77 (302)
368 2h3h_A Sugar ABC transporter, 30.8 1.6E+02 0.0055 28.6 8.8 34 395-432 56-89 (313)
369 1jx6_A LUXP protein; protein-l 30.5 2.3E+02 0.0077 27.9 9.9 91 329-431 41-134 (342)
370 1db3_A GDP-mannose 4,6-dehydra 30.4 34 0.0012 34.4 3.8 32 36-73 1-33 (372)
371 2x4g_A Nucleoside-diphosphate- 30.1 41 0.0014 33.4 4.3 32 38-75 15-47 (342)
372 4hp8_A 2-deoxy-D-gluconate 3-d 30.0 46 0.0016 33.2 4.6 32 34-71 7-39 (247)
373 2vk2_A YTFQ, ABC transporter p 30.0 1.7E+02 0.0058 28.4 8.8 33 395-431 57-89 (306)
374 3kjx_A Transcriptional regulat 29.9 2.4E+02 0.0083 27.9 10.1 84 330-431 67-153 (344)
375 2bd0_A Sepiapterin reductase; 29.8 29 0.001 32.9 3.0 25 36-66 2-27 (244)
376 2afh_E Nitrogenase iron protei 29.7 39 0.0013 33.3 4.1 36 36-78 2-43 (289)
377 2bka_A CC3, TAT-interacting pr 29.7 29 0.00098 32.7 2.9 35 35-75 17-54 (242)
378 1t2a_A GDP-mannose 4,6 dehydra 29.6 37 0.0013 34.4 3.9 33 36-74 24-57 (375)
379 3clk_A Transcription regulator 29.2 1E+02 0.0034 29.7 6.8 85 330-432 7-95 (290)
380 2j37_W Signal recognition part 29.0 3.4E+02 0.012 29.7 11.8 37 34-77 99-141 (504)
381 1id1_A Putative potassium chan 29.0 39 0.0013 30.0 3.5 33 36-75 3-36 (153)
382 3d8u_A PURR transcriptional re 28.3 1.4E+02 0.0049 28.1 7.7 32 395-432 58-89 (275)
383 3brq_A HTH-type transcriptiona 28.3 1.7E+02 0.0059 27.8 8.3 32 395-432 76-108 (296)
384 1cp2_A CP2, nitrogenase iron p 28.2 40 0.0014 32.6 3.8 36 36-78 1-42 (269)
385 3dhn_A NAD-dependent epimerase 27.9 40 0.0014 31.4 3.6 34 36-75 4-38 (227)
386 1t0b_A THUA-like protein; treh 27.7 1.9E+02 0.0065 28.6 8.7 86 331-434 7-106 (252)
387 3enk_A UDP-glucose 4-epimerase 27.7 49 0.0017 32.8 4.4 32 36-73 5-37 (341)
388 1rpn_A GDP-mannose 4,6-dehydra 27.5 44 0.0015 33.1 3.9 33 36-74 14-47 (335)
389 2q1w_A Putative nucleotide sug 27.1 46 0.0016 33.2 4.1 34 35-74 20-54 (333)
390 3u0b_A Oxidoreductase, short c 26.9 45 0.0015 35.9 4.2 31 35-71 212-243 (454)
391 2et6_A (3R)-hydroxyacyl-COA de 26.8 51 0.0017 36.9 4.7 31 34-70 320-351 (604)
392 3e9n_A Putative short-chain de 26.7 38 0.0013 32.4 3.2 30 35-71 4-34 (245)
393 2rh8_A Anthocyanidin reductase 26.7 47 0.0016 33.0 4.0 34 36-75 9-43 (338)
394 3e61_A Putative transcriptiona 26.6 1.5E+02 0.0051 28.1 7.5 29 395-431 63-92 (277)
395 3ay3_A NAD-dependent epimerase 26.5 26 0.00087 33.9 2.0 34 36-75 2-36 (267)
396 3vps_A TUNA, NAD-dependent epi 26.5 47 0.0016 32.4 3.9 34 35-74 6-40 (321)
397 3huu_A Transcription regulator 26.5 1.5E+02 0.0053 28.6 7.7 31 395-431 82-112 (305)
398 3brs_A Periplasmic binding pro 26.3 1.1E+02 0.0037 29.2 6.5 33 395-431 64-96 (289)
399 3kjh_A CO dehydrogenase/acetyl 26.3 44 0.0015 31.4 3.6 33 36-76 1-39 (254)
400 3hcw_A Maltose operon transcri 26.2 1.9E+02 0.0064 27.9 8.3 31 395-431 67-97 (295)
401 2c20_A UDP-glucose 4-epimerase 26.2 48 0.0016 32.7 4.0 30 36-71 1-31 (330)
402 1y1p_A ARII, aldehyde reductas 26.1 52 0.0018 32.5 4.2 33 35-73 10-43 (342)
403 2c5a_A GDP-mannose-3', 5'-epim 26.0 54 0.0018 33.5 4.4 34 35-74 28-62 (379)
404 3slg_A PBGP3 protein; structur 25.9 42 0.0014 33.9 3.6 36 34-75 22-59 (372)
405 3egc_A Putative ribose operon 25.9 1.2E+02 0.004 29.2 6.7 84 330-431 7-93 (291)
406 3lkv_A Uncharacterized conserv 25.8 2.9E+02 0.0099 27.2 9.7 37 393-432 190-227 (302)
407 2b69_A UDP-glucuronate decarbo 25.8 46 0.0016 33.3 3.7 34 34-73 25-59 (343)
408 1n7h_A GDP-D-mannose-4,6-dehyd 25.7 50 0.0017 33.6 4.1 32 36-73 28-60 (381)
409 1ek6_A UDP-galactose 4-epimera 25.4 46 0.0016 33.2 3.7 30 36-71 2-32 (348)
410 1wma_A Carbonyl reductase [NAD 25.3 53 0.0018 31.3 4.0 35 34-74 2-38 (276)
411 2p5y_A UDP-glucose 4-epimerase 25.2 45 0.0016 32.7 3.6 27 39-71 3-30 (311)
412 3u5c_A 40S ribosomal protein S 25.1 3E+02 0.01 27.7 9.5 78 331-432 70-147 (252)
413 3lt0_A Enoyl-ACP reductase; tr 25.1 50 0.0017 33.4 3.9 34 36-74 2-37 (329)
414 1sb8_A WBPP; epimerase, 4-epim 24.9 40 0.0014 33.9 3.1 34 34-73 25-59 (352)
415 3o1i_D Periplasmic protein TOR 24.9 2.2E+02 0.0074 27.2 8.4 87 330-431 4-93 (304)
416 2fvy_A D-galactose-binding per 24.5 3.7E+02 0.012 25.6 10.0 35 395-433 58-92 (309)
417 2ydy_A Methionine adenosyltran 24.5 49 0.0017 32.5 3.6 31 37-73 3-34 (315)
418 1qyc_A Phenylcoumaran benzylic 24.3 52 0.0018 32.1 3.8 33 36-74 4-37 (308)
419 3sc6_A DTDP-4-dehydrorhamnose 24.2 34 0.0012 33.1 2.4 32 36-73 4-37 (287)
420 2iks_A DNA-binding transcripti 24.2 2.3E+02 0.0078 27.2 8.4 32 395-431 75-106 (293)
421 1oc2_A DTDP-glucose 4,6-dehydr 24.2 44 0.0015 33.3 3.3 33 36-74 4-39 (348)
422 2g1u_A Hypothetical protein TM 24.2 67 0.0023 28.5 4.2 33 36-75 19-52 (155)
423 3npg_A Uncharacterized DUF364 24.0 58 0.002 32.6 4.1 66 320-405 106-173 (249)
424 1usg_A Leucine-specific bindin 24.0 2.8E+02 0.0096 26.9 9.1 34 395-433 68-101 (346)
425 2o20_A Catabolite control prot 23.6 2.9E+02 0.01 27.1 9.3 32 395-432 118-149 (332)
426 3p94_A GDSL-like lipase; serin 23.6 45 0.0016 30.1 3.0 46 172-219 73-125 (204)
427 2lpm_A Two-component response 23.5 1.5E+02 0.005 26.1 6.2 76 329-429 6-83 (123)
428 3rfq_A Pterin-4-alpha-carbinol 23.4 1.1E+02 0.0038 29.2 5.7 54 145-206 68-135 (185)
429 4h08_A Putative hydrolase; GDS 23.4 58 0.002 29.7 3.7 46 172-220 73-123 (200)
430 3lft_A Uncharacterized protein 23.4 1.5E+02 0.0051 28.8 7.0 84 332-432 134-220 (295)
431 2p2s_A Putative oxidoreductase 23.3 1.6E+02 0.0056 29.5 7.4 68 331-405 4-75 (336)
432 2rjo_A Twin-arginine transloca 23.3 2.6E+02 0.0087 27.5 8.8 34 395-432 60-95 (332)
433 4id9_A Short-chain dehydrogena 23.3 46 0.0016 33.2 3.2 35 35-75 18-53 (347)
434 3pg5_A Uncharacterized protein 23.2 62 0.0021 33.5 4.2 39 36-80 1-45 (361)
435 3d7l_A LIN1944 protein; APC893 23.1 63 0.0022 29.5 3.9 32 36-75 4-36 (202)
436 3kke_A LACI family transcripti 23.1 2.8E+02 0.0094 26.8 8.8 31 395-431 70-100 (303)
437 2hsg_A Glucose-resistance amyl 23.1 1.8E+02 0.0062 28.6 7.6 32 395-432 115-146 (332)
438 3h5o_A Transcriptional regulat 23.1 2.8E+02 0.0095 27.4 9.0 31 395-431 117-147 (339)
439 3eag_A UDP-N-acetylmuramate:L- 23.0 1.6E+02 0.0056 29.8 7.4 76 328-430 1-95 (326)
440 1ls1_A Signal recognition part 22.9 3E+02 0.01 27.5 9.2 36 35-77 97-138 (295)
441 2wm3_A NMRA-like family domain 22.6 51 0.0018 32.2 3.3 34 36-75 5-40 (299)
442 2c29_D Dihydroflavonol 4-reduc 22.6 61 0.0021 32.2 3.9 34 36-75 5-39 (337)
443 1ihu_A Arsenical pump-driving 22.6 62 0.0021 35.7 4.3 37 33-76 5-47 (589)
444 2oyn_A Hypothetical protein MJ 22.5 30 0.001 32.2 1.5 15 36-50 4-18 (146)
445 4fs3_A Enoyl-[acyl-carrier-pro 22.3 70 0.0024 31.1 4.2 32 35-71 5-38 (256)
446 2yy7_A L-threonine dehydrogena 22.3 48 0.0017 32.3 3.1 31 37-73 3-36 (312)
447 3s2u_A UDP-N-acetylglucosamine 22.3 59 0.002 33.4 3.9 41 392-441 248-293 (365)
448 3e48_A Putative nucleoside-dip 22.2 53 0.0018 31.8 3.3 31 39-75 3-35 (289)
449 3ruf_A WBGU; rossmann fold, UD 22.2 56 0.0019 32.6 3.6 34 35-74 24-58 (351)
450 3m2p_A UDP-N-acetylglucosamine 22.1 60 0.002 31.9 3.7 33 36-74 2-35 (311)
451 2vqe_L 30S ribosomal protein S 21.8 50 0.0017 30.3 2.8 28 163-191 68-96 (135)
452 3c3k_A Alanine racemase; struc 21.8 2.4E+02 0.0083 26.9 8.0 31 395-432 63-93 (285)
453 1kew_A RMLB;, DTDP-D-glucose 4 21.7 53 0.0018 32.9 3.3 31 36-73 1-33 (361)
454 3r7f_A Aspartate carbamoyltran 21.6 4E+02 0.014 27.4 9.9 126 192-363 53-178 (304)
455 2qxy_A Response regulator; reg 21.5 1.5E+02 0.005 24.8 5.7 60 121-203 13-72 (142)
456 1e6u_A GDP-fucose synthetase; 21.5 60 0.0021 31.8 3.6 31 35-71 2-33 (321)
457 3c85_A Putative glutathione-re 21.5 43 0.0015 30.5 2.4 32 36-75 40-73 (183)
458 3ug7_A Arsenical pump-driving 21.3 69 0.0024 33.0 4.1 36 35-76 24-65 (349)
459 3u3x_A Oxidoreductase; structu 21.3 71 0.0024 32.9 4.2 89 331-428 26-142 (361)
460 2et6_A (3R)-hydroxyacyl-COA de 21.2 66 0.0023 36.0 4.2 32 34-71 6-38 (604)
461 1qyd_A Pinoresinol-lariciresin 21.2 66 0.0023 31.4 3.8 33 36-74 4-37 (313)
462 1rkx_A CDP-glucose-4,6-dehydra 21.2 61 0.0021 32.5 3.6 34 35-74 8-42 (357)
463 1vl0_A DTDP-4-dehydrorhamnose 21.0 61 0.0021 31.4 3.5 32 36-73 12-44 (292)
464 2gn4_A FLAA1 protein, UDP-GLCN 20.9 57 0.0019 33.2 3.4 34 35-74 20-56 (344)
465 2pzm_A Putative nucleotide sug 20.7 77 0.0026 31.5 4.2 32 36-73 20-52 (330)
466 1yzf_A Lipase/acylhydrolase; s 20.7 91 0.0031 27.6 4.4 32 172-205 66-103 (195)
467 2r6j_A Eugenol synthase 1; phe 20.6 70 0.0024 31.5 3.9 34 36-75 11-45 (318)
468 1di6_A MOGA, molybdenum cofact 20.6 1.2E+02 0.004 29.2 5.3 32 396-427 66-97 (195)
469 3ilh_A Two component response 20.5 2.7E+02 0.0093 23.0 7.2 66 123-200 20-85 (146)
470 3lkb_A Probable branched-chain 20.1 3.3E+02 0.011 27.2 9.0 91 329-433 5-106 (392)
471 1m3s_A Hypothetical protein YC 20.1 3E+02 0.01 24.9 7.9 37 396-434 79-115 (186)
472 1ivn_A Thioesterase I; hydrola 20.1 83 0.0028 28.3 4.0 35 173-209 62-100 (190)
473 3snr_A Extracellular ligand-bi 20.0 5.1E+02 0.017 25.1 10.1 92 329-433 5-101 (362)
No 1
>3nva_A CTP synthase; rossman fold, nucleotide binding, LIG; 2.50A {Sulfolobus solfataricus}
Probab=100.00 E-value=1e-193 Score=1580.29 Aligned_cols=525 Identities=44% Similarity=0.801 Sum_probs=505.2
Q ss_pred CCCeEEEEccccccchh------hHHHHHHhcCcCCCCceeEEeccCCccccCCCCCCccCcceEEEccCCccccCCCCc
Q 006689 34 LNLQYMFLCLNECACIN------FFSLFLVQNCQYHPNTHFNLFGLDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGN 107 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg------s~g~ll~~~~~~~~g~~v~~~K~DpYlN~d~gtmsp~eHGEvfV~~DG~E~DlDlG~ 107 (635)
|+||||||||||+|||| |||+|||+ |||+||+||||||||||||||||||||||||||||+||||||||
T Consensus 1 ~~~k~i~vtggv~s~lgkgi~~as~g~ll~~-----~g~~v~~~k~dpylnvd~gtmsp~~hgevfv~~dg~e~dldlg~ 75 (535)
T 3nva_A 1 MPNKYIVVTGGVLSSVGKGTLVASIGMLLKR-----RGYNVTAVKIDPYINVDAGTMNPYMHGEVFVTEDGAETDLDLGH 75 (535)
T ss_dssp -CCEEEEEECCCSTTTTHHHHHHHHHHHHHH-----TTCCEEEEEEECSSSSSSTTCCHHHHCCCEECTTCCEECTHHHH
T ss_pred CCceEEEEeCccccCcchHHHHHHHHHHHHH-----CCceEEEEecCcceeecCCCCCccccceEEEecCCccccccccc
Confidence 56899999999999999 99999999 99999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCCcccchHhHHHHHhhhhcCCCCCCeeEEcccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCCcccc
Q 006689 108 YERFMDIKLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGD 187 (635)
Q Consensus 108 YeRfl~~~l~~~~nittGkiy~~vi~kEr~g~ylG~tvQviPHit~~i~~~i~~~~~~pvd~~~~~~dv~i~EiGGTvGd 187 (635)
||||||++|||+||+||||||++||+|||||||||||||||||||||||+||+++|+ ..+||||||||||||||
T Consensus 76 yerf~~~~l~~~~n~ttg~iy~~vi~ker~g~ylg~tvqviphit~eik~~i~~~~~------~~~~dv~i~eiggtvgd 149 (535)
T 3nva_A 76 YERFMDVNMTKYNNITAGKVYFEVIKKEREGKYLGQTVQIIPHVTDQIKDMIRYASK------INNAEITLVEIGGTVGD 149 (535)
T ss_dssp HHHHHCCCCCGGGEEEHHHHHHHHHHHHHTTTTTTCCCCHHHHHHHHHHHHHHHHHH------HHTCSEEEEEECSCTTS
T ss_pred hhhhcCCCcccccCcchhHHHHHHHHHHhcCCcCCCeeEECCCchHHHHHHHHHhhc------cCCCCEEEEEeCCccch
Confidence 999999999999999999999999999999999999999999999999999999996 46899999999999999
Q ss_pred cCcchHHHHHHHhhhhcCCCCEEEEeeeeeeeecCCCccccCCccchhhhhhcCCCcccEEEEeeCCCCChhhhcccccc
Q 006689 188 IESMPFIEALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRSTVALDDNVKGKLSQF 267 (635)
Q Consensus 188 ies~pf~ea~rq~~~~~g~~n~~~ihv~~vp~~~~~~e~KtKptQ~svk~Lrs~Gi~pd~iv~R~~~~l~~~~r~Kislf 267 (635)
|||+||+|||||||+++|++|+|||||||||||+++|||||||||||||+|||+|||||+|||||++++++++|+|||||
T Consensus 150 ies~pf~ea~rq~~~~~g~~n~~~ih~tlvp~~~~~ge~ktkptqhsv~~Lrs~GIqPdilvcRs~~~l~~~~r~KiaLf 229 (535)
T 3nva_A 150 IESLPFLEAVRQLKLEEGEDNVIFVHIALVEYLSVTGELKTKPLQHSVQELRRIGIQPDFIVGRATLPLDDETRRKIALF 229 (535)
T ss_dssp GGGHHHHHHHHHHHHHHCTTTEEEEEEEECCBCTTTSSBCCHHHHHHHHHHHHHTCCCSEEEEEESSCCCHHHHHHHHHH
T ss_pred hcccHHHHHHHHHHHHhCCCCEEEEEeeccceecCCCcccCCchHHHHHHHHhCCCCCCEEEEecCCCCCHHHHHhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCeeeeCCCCCcchhhHHHHHhhhHHHHHHhcCCCCCCCccchHHHHHHHHHhc--CCCCccEEEEEeccCCCcc
Q 006689 268 CHVPEQNIITLYDVPNIWHIPLLLRDQKAHEAIFKVLNLQGTTKEPLLKEWTSRAEICD--GLHEPVRIAMVGKYTGLSD 345 (635)
Q Consensus 268 c~v~~~~Vi~i~dvdt~y~vpl~LreqG~~~~i~~~l~l~~~~~~~~l~~W~~lv~~~~--~~~~~v~IalVGkY~~l~D 345 (635)
|||++++||+++|+||||++|++||+||+++.++++|+|+ .+.++|++|++++++++ ++.++++||+||||+++.|
T Consensus 230 c~V~~~~VI~i~DvdtiY~vpl~L~~qGl~~~~~~~l~l~--~~~~~~~~w~~~~~~~~~~~~~~~v~IalVGKY~~l~D 307 (535)
T 3nva_A 230 TNVKVDHIVSSYDVETSYEVPIILESQKLVSKILSRLKLE--DRQVDLTDWISFVNNIKGINSKKTINIALVGKYTKLKD 307 (535)
T ss_dssp TTCCGGGEEEEECCSCGGGHHHHHHHHTHHHHHHHHTTCC--CCCCCCHHHHHHHHHHHTTTCCCEEEEEEEESCTTSGG
T ss_pred cCCChhceEecCCCChHHHhHHHHHHCCcHHHHHHHcCCC--CCCCCHHHHHHHHHHhhccCCCCeeEEEEEecCcCCch
Confidence 9999999999999999999999999999999999999997 46779999999999999 8888999999999999999
Q ss_pred hHHHHHHHHHHccccceeeeEEEEecCCCCCccccCCChhhhhHHHHhccCCCEEEECCCCCCCcchhHHHHHHHHHHcC
Q 006689 346 AYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRGVQGKILAAKYAREHR 425 (635)
Q Consensus 346 aY~SI~~AL~~ag~~~~vkl~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIllPGGfG~rg~eg~i~air~are~~ 425 (635)
+|.|+.+||+|+|+++.+++++.|++++++++.+. +||+.|.++|||++|||||+++.++++.++++|++++
T Consensus 308 aY~Sv~eAL~hag~~~~~~V~I~wIds~~l~~~~~--------~~~~~L~~~DgIIlpGG~G~~~~~g~i~~ir~a~~~~ 379 (535)
T 3nva_A 308 SYISIKEAIYHASAYIGVRPKLIWIESTDLESDTK--------NLNEILGNVNGIIVLPGFGSRGAEGKIKAIKYAREHN 379 (535)
T ss_dssp GGHHHHHHHHHHHHHTTCEEEEEEEEGGGGCCSSS--------CCTTTTTSCSEEEECCCCSSTTHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHcCCCeEEEEecchhcccccc--------chhhhccCCCEEEECCCCCCccHHHHHHHHHHHHHcC
Confidence 99999999999999999999999999998875432 1467899999999999999999999999999999999
Q ss_pred CCEEEEehhHHHHHHHHhcccccccCCCCCccCCCCCCCeeeeCCCCC-cCcCCCccccCceeEEEecCCchhhhccCCc
Q 006689 426 IPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGS-KTHMGGTMRLGSRRTYFQIKDCKSAKLYGNR 504 (635)
Q Consensus 426 iP~LGICLGmQllaie~GrnV~glkda~S~Ef~~~~~~pvi~~mpe~~-~~h~GgtmrLG~~~v~l~~~~sll~~iyg~~ 504 (635)
+|+||||+|||+|+++|||+|+|++||+|+||++++++|++.+|+++. ..++|||||+|.|+|.+.++ |+++++|| +
T Consensus 380 ~PiLGIClG~Qll~va~Gg~v~g~qda~s~Ef~~~~~~pvI~~m~eq~~~~~~ggtmrlg~h~v~l~~g-S~L~~iyG-~ 457 (535)
T 3nva_A 380 IPFLGICFGFQLSIVEFARDVLGLSEANSTEINPNTKDPVITLLDEQKNVTQLGGTMRLGAQKIILKEG-TIAYQLYG-K 457 (535)
T ss_dssp CCEEEETHHHHHHHHHHHHTTTCCTTCEETTTCTTCSCEEEECBCSSSCBCSSCCCCEEEEEEEEECTT-SHHHHHHT-S
T ss_pred CcEEEECcchhHHHHHhhccccCccCCcccccCCCCCCCeeecchhcccccccCCccccCceEEEEcCC-CcHHHHhC-C
Confidence 999999999999999999999999999999999999999999999864 47899999999999999998 99999997 6
Q ss_pred eeEEEEeeeeeeeChhhhhhhcCCCeEEEEEeCCCCeEEEEEeCCCCcEEEEcccCCCcCCCCCchHHHHHHHHHHhc
Q 006689 505 TFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAACG 582 (635)
Q Consensus 505 ~~I~erHrHrYeVnp~~v~~Le~~Gl~~sa~s~dg~~vE~iE~~~~p~fvGVQFHPE~ss~p~~p~pLF~~Fv~aa~~ 582 (635)
..|.+||||||+||+.+.+.+++.|++++|+++||. +|++|+++||||+|||||||+.++|.+++|||.+|++||.+
T Consensus 458 ~~I~erHrHryeVNs~h~q~l~~~GL~vsA~s~DG~-IEAIE~~~~pf~vGVQfHPE~~~~p~~~~~LF~~Fv~Aa~~ 534 (535)
T 3nva_A 458 KVVYERHRHRYEVNPKYVDILEDAGLVVSGISENGL-VEIIELPSNKFFVATQAHPEFKSRPTNPSPIYLGFIRAVAS 534 (535)
T ss_dssp SEEEEEEEECCEECHHHHHHHHHTTCEEEEECTTCC-EEEEECTTSSCEEEESSCGGGGCCSSSCCHHHHHHHHHHTC
T ss_pred CeeeecccccceechHHHhhcccCCeEEEEEeCCCC-EEEEEeCCCCcEEEEEeCCEecCCCCChhHHHHHHHHHHHh
Confidence 678999999999999999999889999999999995 99999999999999999999999999999999999999864
No 2
>1vco_A CTP synthetase; tetramer, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; HET: GLN; 2.15A {Thermus thermophilus} SCOP: c.23.16.1 c.37.1.10 PDB: 1vcn_A 1vcm_A
Probab=100.00 E-value=5.4e-160 Score=1329.69 Aligned_cols=523 Identities=47% Similarity=0.807 Sum_probs=490.5
Q ss_pred CeEEEEccccccchh------hHHHHHHhcCcCCCCceeEEeccCCccccCCCCCCccCcceEEEccCCccccCCCCccc
Q 006689 36 LQYMFLCLNECACIN------FFSLFLVQNCQYHPNTHFNLFGLDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYE 109 (635)
Q Consensus 36 ~k~i~vtggv~s~lg------s~g~ll~~~~~~~~g~~v~~~K~DpYlN~d~gtmsp~eHGEvfV~~DG~E~DlDlG~Ye 109 (635)
+|||||||||+|++| |||+||++ |||+|+++|+|||||||||||||+||||||||+||+|+||||||||
T Consensus 12 ~~~i~v~gg~~s~~gk~~~~~~~~~~l~~-----~g~~v~~~k~~py~n~d~~~ms~~~hge~~vt~dg~e~~~~~g~~~ 86 (550)
T 1vco_A 12 RKYVFITGGVVSSLGKGILTSSLGALLRA-----RGYRVTAIKIDPYVNVDAGTMRPYEHGEVFVTADGAETDLDIGHYE 86 (550)
T ss_dssp CEEEEEEECSSSCSCHHHHHHHHHHHHHT-----TTCCEEEEEEECSSCSSGGGSCSSTTSCCEECTTCCEECTHHHHHH
T ss_pred eeEEEEeCCcccCcchHHHHHHHHHHHHh-----CCceeeEeecccccccCccccCcccCCceEECCCCceehhhhccHH
Confidence 799999999999999 99999999 9999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCcccchHhHHHHHhhhhcCCCCCCeeEEcccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCCcccccC
Q 006689 110 RFMDIKLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIE 189 (635)
Q Consensus 110 Rfl~~~l~~~~nittGkiy~~vi~kEr~g~ylG~tvQviPHit~~i~~~i~~~~~~pvd~~~~~~dv~i~EiGGTvGdie 189 (635)
||+++.|+++|||||||||++||+|||+|||||+|||||||||||||+||+++++ +.++||||||+||||||||
T Consensus 87 ~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~y~~~~~~~~~~~~~~i~~~~~~~~~------~~~~d~~i~e~~gt~~di~ 160 (550)
T 1vco_A 87 RFLDMDLSRGNNLTTGQVYLSVIQKERRGEYLSQTVQVIPHITDEIKERIRKVAE------EQKAEIVVVEVGGTVGDIE 160 (550)
T ss_dssp HHHTSCCCGGGEEEHHHHHHHHHHHHHTTTTTTCCCCTTTHHHHHHHHHHHHHHH------HTTCSEEEEEECSCTTSST
T ss_pred hcCCcccCCCCCeeccEEchhhhhhhcccccccCceEEhhHHHHHHHHHHHHHhc------ccCCCEEEEECCCChhHhh
Confidence 9999999999999999999999999999999999999999999999999999985 4579999999999999999
Q ss_pred cchHHHHHHHhhhhcCCCCEEEEeeeeeeeecCCCccccCCccchhhhhhcCCCcccEEEEeeCCCCChhhhccccccCC
Q 006689 190 SMPFIEALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRSTVALDDNVKGKLSQFCH 269 (635)
Q Consensus 190 s~pf~ea~rq~~~~~g~~n~~~ihv~~vp~~~~~~e~KtKptQ~svk~Lrs~Gi~pd~iv~R~~~~l~~~~r~Kislfc~ 269 (635)
||||+||+||||+++|++|+|||||||||||+++||+||||||||||+|||.|||||++|||++++++++||+|+|||||
T Consensus 161 ~~~~~~~~rq~~~~~~~~~~~~~h~~~~p~~~~~~e~ktkptq~sv~~lrs~gi~pd~lvvR~~~~~~~~~r~k~sL~~~ 240 (550)
T 1vco_A 161 SLPFLEAIRQFRFDEGEGNTLYLHLTLVPYLETSEEFKTKPTQHSVATLRGVGIQPDILVLRSARPVPEEVRRKVALFTN 240 (550)
T ss_dssp THHHHHHHHTHHHHHCTTSEEEEEEEECCEETTTTEECCHHHHHHHHHHHHTTCCCSEEEEEESSCCCHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHhHhhCcCCEEEEEEeCeecccCCCCcCCCCcchhHHHHhcCCCccCEEEEeCCCCCCcchhcccchhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCeeeeCCCCCcchhhHHHHHhhhHHHHHHhcCCCCCCCccchHHHHHHHHHhcCCCCccEEEEEeccCCCcchHHH
Q 006689 270 VPEQNIITLYDVPNIWHIPLLLRDQKAHEAIFKVLNLQGTTKEPLLKEWTSRAEICDGLHEPVRIAMVGKYTGLSDAYLS 349 (635)
Q Consensus 270 v~~~~Vi~i~dvdt~y~vpl~LreqG~~~~i~~~l~l~~~~~~~~l~~W~~lv~~~~~~~~~v~IalVGkY~~l~DaY~S 349 (635)
|++++||+++||||||+||++||+||+|++++++++++ ...+++..|.+++.++.++.++++|+++|||..+.|+|.|
T Consensus 241 v~~~~Vi~~~dvdt~y~lp~~lr~~G~~~~v~~~~~l~--~~~~~l~~w~~~~~~~~~~~~~v~I~ivgkyv~l~D~y~S 318 (550)
T 1vco_A 241 VRPGHVFSSPTVEHLYEVPLLLEEQGLGRAVERALGLE--AVIPNLSFWQEAVRVLKHPERTVKIAIAGKYVKMPDAYLS 318 (550)
T ss_dssp CCGGGEEEEECCSCTTHHHHHHHHHTHHHHHHHHTTCC--CCCCCCHHHHHHHHHHHSCSEEEEEEEEESCC---CTTHH
T ss_pred CCccCeeecCCCChHHHHHHHHHHcCChhhhHhhCCCC--chhHHHHHhHHHHHhhcCCCCceEEcccCCeEEEEecHHH
Confidence 99999999999999999999999999999999999986 3566889999999999998888999999999999999999
Q ss_pred HHHHHHHccccceeeeEEEEecCCCCCccccCCChhhhhHHHHhccCCCEEEECCCCCCCcchhHHHHHHHHHHcCCCEE
Q 006689 350 ILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRGVQGKILAAKYAREHRIPYL 429 (635)
Q Consensus 350 I~~AL~~ag~~~~vkl~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIllPGGfG~rg~eg~i~air~are~~iP~L 429 (635)
+.++|.|++.+.++++.+.|++++++++++ +++.+.++||||||||||+++.++++.++++|+++++|+|
T Consensus 319 v~~aL~~~g~~~g~~v~I~~~d~~~~~~~~----------~~~~L~~~DGIILpGGfGd~~~~g~i~~ir~a~e~~iPiL 388 (550)
T 1vco_A 319 LLEALRHAGIKNRARVEVKWVDAESLEAAD----------LEEAFRDVSGILVPGGFGVRGIEGKVRAAQYARERKIPYL 388 (550)
T ss_dssp HHHHHHHHHHHTTEEEEEEEEEGGGC--CC----------HHHHTTTCSCEEECCCCSSTTHHHHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHHHcCCeEEEEEeCccccccch----------HHHHHhcCCEEEECCCCCCcchhhhHHHHHHHHHCCCcEE
Confidence 999999999999999999999987765322 4466889999999999999999999999999999999999
Q ss_pred EEehhHHHHHHHHhcccccccCCCCCccCCCCCCCeeeeCCC-CCcCcCCCccccCceeEEEecCCchhhhccCCceeEE
Q 006689 430 GICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPE-GSKTHMGGTMRLGSRRTYFQIKDCKSAKLYGNRTFID 508 (635)
Q Consensus 430 GICLGmQllaie~GrnV~glkda~S~Ef~~~~~~pvi~~mpe-~~~~h~GgtmrLG~~~v~l~~~~sll~~iyg~~~~I~ 508 (635)
|||||||+|++++|+++.++++++|+||++.+.+|++..|++ ...+|+|++||+|.++|.+.++ +++.++|+ +..|.
T Consensus 389 GICLGmQlL~~a~Gg~v~~l~~~~s~E~~~~~~hpvi~~~~~q~~i~~~ggtmrlG~~~v~i~~~-s~l~~iy~-~~~v~ 466 (550)
T 1vco_A 389 GICLGLQIAVIEFARNVAGLKGANSTEFDPHTPHPVIDLMPEQLEVEGLGGTMRLGDWPMRIKPG-TLLHRLYG-KEEVL 466 (550)
T ss_dssp EETHHHHHHHHHHHHHTSCCTTCEETTTCTTCSCEEEEESCGGGCC---CCCCEEEEEEEEECTT-SHHHHHHC-CSEEE
T ss_pred EECcCHHHHHHHhCcccccCCccccccccCCCCCCeEEeccccccccccCCcccccceEEEEccC-chhhHhcC-Cceee
Confidence 999999999999999999999999999999999999999986 3578999999999999999886 89999996 56778
Q ss_pred EEeeeeeeeChhhhhhhcCCCeEEEEEeCCC-----CeEEEEEeCCCCcEEEEcccCCCcCCCCCchHHHHHHHHHHhcc
Q 006689 509 ERHRHRYEVNPDMIARLENAGLSFTGKDETS-----QRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAACGQ 583 (635)
Q Consensus 509 erHrHrYeVnp~~v~~Le~~Gl~~sa~s~dg-----~~vE~iE~~~~p~fvGVQFHPE~ss~p~~p~pLF~~Fv~aa~~~ 583 (635)
++|||+|+||+.+.+.+++.|++++|+++|| ..+|++|+++||||+|||||||++++|.++++||++|++++.++
T Consensus 467 e~h~H~Y~Vns~~~~~l~~~gl~v~a~s~dG~g~~~~~VeaIe~~~~p~fvGVQFHPE~~~~p~~g~~LF~~Fv~aa~~~ 546 (550)
T 1vco_A 467 ERHRHRYEVNPLYVDGLERAGLVVSATTPGMRGRGAGLVEAIELKDHPFFLGLQSHPEFKSRPMRPSPPFVGFVEAALAY 546 (550)
T ss_dssp EEEEESEEECHHHHHHHHHHTEEEEEECCCBTTBSTTCEEEEEETTSSSEEEESSCGGGGCBTTBCCHHHHHHHHHHHHH
T ss_pred eeccceEEEchHHhhccccCCeEEEEEeCCCCccCCCcEEEEEeCCCCEEEEEEeCCccCCCCCChHHHHHHHHHHHHhh
Confidence 9999999999998888755799999999984 37999999999999999999999999999999999999998754
No 3
>1s1m_A CTP synthase; CTP synthetase, UTP:ammonia ligase (ADP-forming), cytidine 5 triphosphate synthase, ammonia lyase; 2.30A {Escherichia coli} SCOP: c.23.16.1 c.37.1.10 PDB: 2ad5_A*
Probab=100.00 E-value=4.7e-158 Score=1312.90 Aligned_cols=523 Identities=46% Similarity=0.792 Sum_probs=489.2
Q ss_pred CCCeEEEEccccccchh------hHHHHHHhcCcCCCCceeEEeccCCccccCCCCCCccCcceEEEccCCccccCCCCc
Q 006689 34 LNLQYMFLCLNECACIN------FFSLFLVQNCQYHPNTHFNLFGLDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGN 107 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg------s~g~ll~~~~~~~~g~~v~~~K~DpYlN~d~gtmsp~eHGEvfV~~DG~E~DlDlG~ 107 (635)
|.||||||||||+|++| |||+||++ |||+|+++|+|||||||||||||+||||||||+||+|+||||||
T Consensus 1 ~~~~~i~v~gg~~s~~gk~~~~~~l~~~l~~-----~g~~v~~~k~~py~n~d~~~ms~~~hge~~vt~dg~e~~~~~~~ 75 (545)
T 1s1m_A 1 MTTNYIFVTGGVVSSLGKGIAAASLAAILEA-----RGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGH 75 (545)
T ss_dssp CCCEEEEEEECSSSCSCHHHHHHHHHHHHHT-----TTCCEEEEEEECCSCSCGGGSCTTTSCCCEECTTSCEECTHHHH
T ss_pred CCceEEEEeCCcccCcchHHHHHHHHHHHHh-----CCceeeeeeccccccCCCCccCcccCCCeEECCCCCeehhhhcc
Confidence 34799999999999999 99999999 99999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCCcccchHhHHHHHhhhhcCCCCCCeeEEcccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCCcccc
Q 006689 108 YERFMDIKLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGD 187 (635)
Q Consensus 108 YeRfl~~~l~~~~nittGkiy~~vi~kEr~g~ylG~tvQviPHit~~i~~~i~~~~~~pvd~~~~~~dv~i~EiGGTvGd 187 (635)
||||+|+.|+++|||||||||++||+|||+|||+|+||||+||||||||+||+++++ ++||||||+||||||
T Consensus 76 ~~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~y~~~~~~~~~~~~~~i~~~~~~~~~--------~~d~~i~e~~gt~~d 147 (545)
T 1s1m_A 76 YERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGE--------GHDVVLVEIGGTVGD 147 (545)
T ss_dssp HHHHCSSCCCGGGEEEHHHHHHHHHHHHHTTTTTTCCCCHHHHHHHHHHHHHHHHHT--------TCSEEEEEECSCTTS
T ss_pred ceeeeceeecCCCCeeccEEeeehhhhccccccccCceeehhHHHHHHHHHHHHHhc--------cCCEEEEECCCChhh
Confidence 999999999999999999999999999999999999999999999999999999984 789999999999999
Q ss_pred cCcchHHHHHHHhhhhcCCCCEEEEeeeeeeeecCCCccccCCccchhhhhhcCCCcccEEEEeeCCCCChhhhcccccc
Q 006689 188 IESMPFIEALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRSTVALDDNVKGKLSQF 267 (635)
Q Consensus 188 ies~pf~ea~rq~~~~~g~~n~~~ihv~~vp~~~~~~e~KtKptQ~svk~Lrs~Gi~pd~iv~R~~~~l~~~~r~Kislf 267 (635)
||||||+||+||||+++|++|+|||||||||||+++||+||||||||||+|||.|||||+|||||+++++++||+|+|||
T Consensus 148 i~~~~~~~~~~q~~~~~~~~~~~~~h~~~~p~~~~~ge~ktkptq~sv~~l~s~gi~pd~lv~R~~~~~~~~~r~kisL~ 227 (545)
T 1s1m_A 148 IESLPFLEAIRQMAVEIGREHTLFMHLTLVPYMAASGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALF 227 (545)
T ss_dssp STTHHHHHHHHHHHHHHCTTSEEEEEEEECCEETTTTEECCHHHHHHHHHHHTTTCCCSEEEEEESSCCCHHHHHHHHHT
T ss_pred hhChHHHHHHHHHhHhhCcCcEEEEEEeCcccccCCCCcCCCCCcCCHHHHhCCCCccCEEEEeCCCCCCchhhccCChh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCeeeeCCCCCcchhhHHHHHhhhHHHHHHhcCCCCCCCccchHHHHHHHHHhcCCCCccEEEEEeccCCCcchH
Q 006689 268 CHVPEQNIITLYDVPNIWHIPLLLRDQKAHEAIFKVLNLQGTTKEPLLKEWTSRAEICDGLHEPVRIAMVGKYTGLSDAY 347 (635)
Q Consensus 268 c~v~~~~Vi~i~dvdt~y~vpl~LreqG~~~~i~~~l~l~~~~~~~~l~~W~~lv~~~~~~~~~v~IalVGkY~~l~DaY 347 (635)
|||++++||+++||||||+||++||+||+|++++++++++ ...+++.+|.+++++++++...++||++|||+.+.|+|
T Consensus 228 ~~v~~~~Vi~~~dvdt~y~lp~~lr~~G~~~~ii~~~~l~--~~~~~l~~w~~lv~~v~~~~~~v~i~~vGkyv~l~D~y 305 (545)
T 1s1m_A 228 CNVPEKAVISLKDVDSIYKIPGLLKSQGLDDYICKRFSLN--CPEANLSEWEQVIFEEANPVSEVTIGMVGKYIELPDAY 305 (545)
T ss_dssp TCCCSSCEEEEECCSCGGGHHHHHHHTTHHHHHHHHTTCC--CCCCCCHHHHHHHHHHHCCSEEEEEEEEESSCSSGGGG
T ss_pred hCccccCceecCCCChHHHHHHHHHHcCChhhhhhhCCCC--chhHHHHHHHHHHHhccCCCCeEEeCCcCCeEEEEEHH
Confidence 9999999999999999999999999999999999999986 35668899999999999998899999999999999999
Q ss_pred HHHHHHHHHccccceeeeEEEEecCCCCCccccCCChhhhhHHHHhccCCCEEEECCCCCCCcchhHHHHHHHHHHcCCC
Q 006689 348 LSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRGVQGKILAAKYAREHRIP 427 (635)
Q Consensus 348 ~SI~~AL~~ag~~~~vkl~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIllPGGfG~rg~eg~i~air~are~~iP 427 (635)
.|+.++|.++|+++.+++.+.|+++++++.. +++.+.++||||||||||+++.++++.++++++++++|
T Consensus 306 ~Si~~aL~~~G~~~~~~V~i~~~d~e~i~~~-----------~~~~l~~~DGIilsGGpg~~~~~g~~~~i~~a~~~~~P 374 (545)
T 1s1m_A 306 KSVIEALKHGGLKNRVSVNIKLIDSQDVETR-----------GVEILKGLDAILVPGGFGYRGVEGMITTARFARENNIP 374 (545)
T ss_dssp HHHHHHHHHHHHHHTEEEEEEEEEHHHHHHH-----------CTTTTTTCSEEEECCCCSSTTHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHhCcccCCeEEEccCCHHHhhhh-----------hhhhhhcCCEEEECCCCCCccchhhHHHHHHHHHCCCc
Confidence 9999999999999888899999987654311 12347789999999999999999999999999999999
Q ss_pred EEEEehhHHHHHHHHhcccccccCCCCCccCCCCCCCeeeeC----------CCC-CcCcCCCccccCceeEEEecCCch
Q 006689 428 YLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFM----------PEG-SKTHMGGTMRLGSRRTYFQIKDCK 496 (635)
Q Consensus 428 ~LGICLGmQllaie~GrnV~glkda~S~Ef~~~~~~pvi~~m----------pe~-~~~h~GgtmrLG~~~v~l~~~~sl 496 (635)
+||||||||+|+++||+++++|++++|+||++.+.+|++.+| +++ ...++|||||+|.++|.+.++ ++
T Consensus 375 iLGIClG~Qll~va~Gg~v~~l~~a~s~E~~~~~~hpvi~l~~~w~~~~g~~~~q~~~~~~ggtmrlG~~~v~l~~~-s~ 453 (545)
T 1s1m_A 375 YLGICLGMQVALIDYARHVANMENANSTEFVPDCKYPVVALITEWRDENGNVEVRSEKSDLGGTMRLGAQQCQLVDD-SL 453 (545)
T ss_dssp EEEETHHHHHHHHHHHHHHHCCTTCEETTTCSSCSCEEEECTTTCCCTTSCCC----------CCEEEEEEEEECTT-CH
T ss_pred EEEECChHHHHHHHhCCceecCCCCcccccCCCCCCceEEeecccccccccccccccccccCccccccceeeEeccC-CH
Confidence 999999999999999999999999999999999999999988 432 346789999999999999887 89
Q ss_pred hhhccCCceeEEEEeeeeeeeChhhhhhhcCCCeEEEEEeCCCCeEEEEEeCCCCcEEEEcccCCCcCCCCCchHHHHHH
Q 006689 497 SAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGL 576 (635)
Q Consensus 497 l~~iyg~~~~I~erHrHrYeVnp~~v~~Le~~Gl~~sa~s~dg~~vE~iE~~~~p~fvGVQFHPE~ss~p~~p~pLF~~F 576 (635)
+.++|+ +..+.++|+|+|+||+.+.+.+++.|++++|+++||..+|++|+++||||+|||||||+.++|.++++||++|
T Consensus 454 l~~iyg-~~~v~e~h~Hry~VNs~~~~~l~~~gl~v~a~s~dg~~VEaie~~~~p~flGVQFHPE~~~~p~~g~~LF~~F 532 (545)
T 1s1m_A 454 VRQLYN-APTIVERHRHRYEVNNMLLKQIEDAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGF 532 (545)
T ss_dssp HHHHTT-SSEEEEEEEECCEECHHHHHHHHHTTCEEEEECSSSCCEEEEECTTSSSEEEESSCGGGTCCTTTCCHHHHHH
T ss_pred HHHhcC-CceEEEecCcceEEChHHhhhcccCCeEEEEECCCCCceEEEEeCCCCEEEEEeCCCCCCCCCCChHHHHHHH
Confidence 999996 5678899999999999999888778999999999996699999999999999999999999999999999999
Q ss_pred HHHHhcch
Q 006689 577 IAAACGQL 584 (635)
Q Consensus 577 v~aa~~~~ 584 (635)
+++|.++.
T Consensus 533 v~aa~~~~ 540 (545)
T 1s1m_A 533 VKAASEFQ 540 (545)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99997654
No 4
>2c5m_A CTP synthase; cytidine 5-prime triphosphate synthetase, CTP synthetase, UTP, glutamine, amidotransferase, ligase, phosphorylation; 2.80A {Homo sapiens} PDB: 2vo1_A 3ihl_A*
Probab=100.00 E-value=1.7e-138 Score=1042.54 Aligned_cols=266 Identities=59% Similarity=0.983 Sum_probs=223.6
Q ss_pred CeEEEEccccccchh------hHHHHHHhcCcCCCCceeEEeccCCccccCCCCCCccCcceEEEccCCccccCCCCccc
Q 006689 36 LQYMFLCLNECACIN------FFSLFLVQNCQYHPNTHFNLFGLDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYE 109 (635)
Q Consensus 36 ~k~i~vtggv~s~lg------s~g~ll~~~~~~~~g~~v~~~K~DpYlN~d~gtmsp~eHGEvfV~~DG~E~DlDlG~Ye 109 (635)
||||||||||+|||| |||+|||+ |||+|++||||||||||||||||||||||||||||+||||||||||
T Consensus 23 mKyIfVTGGVvSglGKGi~aaSlG~LLk~-----rG~~Vt~~KiDPYlNvD~GTMsP~qHGEVfVtdDG~EtDLDLGhYE 97 (294)
T 2c5m_A 23 MKYILVTGGVISGIGKGIIASSVGTILKS-----CGLHVTSIKIDPYINIDAGTFSPYEHGEVFVLDDGGEVDLDLGNYE 97 (294)
T ss_dssp CEEEEEEECSSTTSCHHHHHHHHHHHHHT-----TTCCEECCEEECBCCCCC----------------------------
T ss_pred eEEEEEcCccccccchHHHHHHHHHHHHH-----CCCeeEEEecCCceeecCCCCCccccceEEEecCCccccccccchh
Confidence 799999999999999 99999999 9999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCcccchHhHHHHHhhhhcCCCCCCeeEEcccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCCcccccC
Q 006689 110 RFMDIKLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIE 189 (635)
Q Consensus 110 Rfl~~~l~~~~nittGkiy~~vi~kEr~g~ylG~tvQviPHit~~i~~~i~~~~~~pvd~~~~~~dv~i~EiGGTvGdie 189 (635)
||||++|||+||+||||||++||+|||||||||||||||||||||||+||+++|++|||+++.+||||||||||||||||
T Consensus 98 RFl~~~lt~~nNiTtGkIY~~VI~KERrGdYLGkTVQVIPHiTdeIk~~I~~~a~~pvd~~~~~~Dv~IiEiGGTVGDIE 177 (294)
T 2c5m_A 98 RFLDIRLTKDNNLTTGKIYQYVINKERKGDYLGKTVQVVPHITDAIQEWVMRQALIPVDEDGLEPQVCVIELGGTVGDIE 177 (294)
T ss_dssp -------CCTTEEEHHHHHHHHHHHHHTSCSCSSCCCTTTHHHHHHHHHHHHHTTCC------CCSEEEEEECSCTTCST
T ss_pred hhcCCCCcccccccHHHHHHHHHHHHhcCCcCCceeEEcCCchHHHHHHHHHHhcCCccccCCCCCEEEEEeCCcchhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchHHHHHHHhhhhcCCCCEEEEeeeeeeeecCCCccccCCccchhhhhhcCCCcccEEEEeeCCCCChhhhccccccCC
Q 006689 190 SMPFIEALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRSTVALDDNVKGKLSQFCH 269 (635)
Q Consensus 190 s~pf~ea~rq~~~~~g~~n~~~ihv~~vp~~~~~~e~KtKptQ~svk~Lrs~Gi~pd~iv~R~~~~l~~~~r~Kislfc~ 269 (635)
|+||+||+||||+++|++|+|||||||||||+++|||||||||||||+|||+|||||+|+|||+++++++.|+|||+||+
T Consensus 178 S~PFlEAiRQ~~~~~g~~n~~~iHvtlVP~i~~~gE~KTKPTQhSVk~Lr~~Gi~PDiivcRse~~l~~~~k~KIalfc~ 257 (294)
T 2c5m_A 178 SMPFIEAFRQFQFKVKRENFCNIHVSLVPQPSSTGEQKTKPTQNSVRELRGLGLSPDLVVCRCSNPLDTSVKEKISMFCH 257 (294)
T ss_dssp THHHHHHHHTTTTTSCTTTEEEEEEEECCCCTTTCSCCCHHHHHHHHHHHHTTCCCSEEEEECSSCCCTTHHHHHHHTTT
T ss_pred ccHHHHHHHHHHHHhCCCCEEEEEeeccceecCCCcccCCCcHHHHHHHHHcCCCCCEEEEecCCCCCHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCeeeeCCCCCcchhhHHHHHhhhHHHHHHhcCC
Q 006689 270 VPEQNIITLYDVPNIWHIPLLLRDQKAHEAIFKVLNL 306 (635)
Q Consensus 270 v~~~~Vi~i~dvdt~y~vpl~LreqG~~~~i~~~l~l 306 (635)
|++++||+++|++|+|+||++|++||+++.++++|+|
T Consensus 258 V~~~~Vi~~~D~~~IY~VPl~l~~qgl~~~i~~~L~l 294 (294)
T 2c5m_A 258 VEPEQVICVHDVSSIYRVPLLLEEQGVVDYFLRRLDL 294 (294)
T ss_dssp CCCSCCEECCCCSCGGGHHHHHHTTTHHHHHHHHTTC
T ss_pred CCHHHEEecCCcchHHHhhHHHHHCChHHHHHHHhCc
Confidence 9999999999999999999999999999999999976
No 5
>2vo1_A CTP synthase 1; pyrimidine biosynthesis, glutamine amidotransferase, phosphorylation, amidotransferase, cytidine 5-prime triphos synthetase, UTP; 2.8A {Homo sapiens} SCOP: c.37.1.10 PDB: 3ihl_A*
Probab=100.00 E-value=2e-136 Score=1035.30 Aligned_cols=269 Identities=58% Similarity=0.971 Sum_probs=226.7
Q ss_pred CCCeEEEEccccccchh------hHHHHHHhcCcCCCCceeEEeccCCccccCCCCCCccCcceEEEccCCccccCCCCc
Q 006689 34 LNLQYMFLCLNECACIN------FFSLFLVQNCQYHPNTHFNLFGLDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGN 107 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg------s~g~ll~~~~~~~~g~~v~~~K~DpYlN~d~gtmsp~eHGEvfV~~DG~E~DlDlG~ 107 (635)
+.||||||||||+|||| |||+|||+ |||+|+++|||||||+|||||||||||||||||||+||||||||
T Consensus 21 ~~~KyIfVTGGVvS~lGKGi~aaSlg~lLk~-----~G~~Vt~~K~DPYlNvD~GTMsP~qHGEVfVtdDG~EtDLDLGh 95 (295)
T 2vo1_A 21 QSMKYILVTGGVISGIGKGIIASSVGTILKS-----CGLHVTSIKIDPYINIDAGTFSPYEHGEVFVLDDGGEVDLDLGN 95 (295)
T ss_dssp CCCEEEEEEECSSSSSSHHHHHHHHHHHHHH-----TTCCEEEEEEECSSCCC---------------------------
T ss_pred ccceEEEEcCCcccccccHHHHHHHHHHHHH-----CCCcceeeecccceecCCCCCChhhhceEEeecccccccccccc
Confidence 45899999999999999 99999999 99999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCCcccchHhHHHHHhhhhcCCCCCCeeEEcccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCCcccc
Q 006689 108 YERFMDIKLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGD 187 (635)
Q Consensus 108 YeRfl~~~l~~~~nittGkiy~~vi~kEr~g~ylG~tvQviPHit~~i~~~i~~~~~~pvd~~~~~~dv~i~EiGGTvGd 187 (635)
||||||++|+|+||+||||||++||+|||||||||||||||||||||||+||+++|.+|+|+++.+||||||||||||||
T Consensus 96 YERFl~~~l~~~~niTtGkiY~~Vi~kERrGdYLG~TVQvIPHiTdeIk~~I~~~a~~~~~~~~~~~Dv~IvEiGGTVGD 175 (295)
T 2vo1_A 96 YERFLDIRLTKDNNLTTGKIYQYVINKERKGDYLGKTVQVVPHITDAIQEWVMRQALIPVDEDGLEPQVCVIELGGTVGD 175 (295)
T ss_dssp ------------CEEEHHHHHHHHHHHHHTTTTTTCCCCHHHHHHHHHHHHHHHHHHSCCSSSCCCCSEEEEEECSCTTC
T ss_pred hHhhccCCcCccccccHHHHHHHHHHHHHcCCCCCCeEEecCChhhHHHHHHHHhhcccccccCCCCCEEEEEcCceecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcchHHHHHHHhhhhcCCCCEEEEeeeeeeeecCCCccccCCccchhhhhhcCCCcccEEEEeeCCCCChhhhcccccc
Q 006689 188 IESMPFIEALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRSTVALDDNVKGKLSQF 267 (635)
Q Consensus 188 ies~pf~ea~rq~~~~~g~~n~~~ihv~~vp~~~~~~e~KtKptQ~svk~Lrs~Gi~pd~iv~R~~~~l~~~~r~Kislf 267 (635)
|||+||+||+||||+++|++|+||||||||||++++||+||||||||||+|||+|||||+|+|||+.+++++.|+|||+|
T Consensus 176 IEs~PFlEAiRQ~~~~~g~~n~~~iHvtlvP~l~~~gE~KTKPTQhSVkeLr~~GIqPDiivcRse~pl~~~~k~KIAlF 255 (295)
T 2vo1_A 176 IESMPFIEAFRQFQFKVKRENFCNIHVSLVPQPSSTGEQKTKPTQNSVRELRGLGLSPDLVVCRCSNPLDTSVKEKISMF 255 (295)
T ss_dssp GGGHHHHHHHHHHHHHSCGGGEEEEEEEECCCCCC-CCCCCHHHHHHHHHHHHHTCCCSEEEEECSSCCCHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHhhcccceeEEEeeccccccccccccccchHhHHHHHHhcCCCCCeeeecCCCCCCHHHHHHHHHc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCeeeeCCCCCcchhhHHHHHhhhHHHHHHhcCCC
Q 006689 268 CHVPEQNIITLYDVPNIWHIPLLLRDQKAHEAIFKVLNLQ 307 (635)
Q Consensus 268 c~v~~~~Vi~i~dvdt~y~vpl~LreqG~~~~i~~~l~l~ 307 (635)
|+|++++||+++|++|+|+||++|++||+++.++++|+|+
T Consensus 256 CnV~~~~VI~~~Dv~sIYeVPl~L~~qgl~~~i~~~L~LP 295 (295)
T 2vo1_A 256 CHVEPEQVICVHDVSSIYRVPLLLEEQGVVDYFLRRLDLP 295 (295)
T ss_dssp TTSCGGGEEEECCCSSGGGHHHHHHHTTHHHHHHHHHTCC
T ss_pred cCCCHHHEEEcCCcCcHHHHHHHHHHCCchHHHHHHcCCC
Confidence 9999999999999999999999999999999999999985
No 6
>2v4u_A CTP synthase 2; pyrimidine biosynthesis, glutamine amidotransferase, glutaminase domain, 5-OXO-L-norleucine, DON, ligase, phosphoprotein; HET: CYD; 2.3A {Homo sapiens} PDB: 2vkt_A
Probab=100.00 E-value=1.1e-48 Score=405.70 Aligned_cols=276 Identities=53% Similarity=0.869 Sum_probs=233.8
Q ss_pred HHHHHHHHHhcCCCCccEEEEEeccCCCcchHHHHHHHHHHccccceeeeEEEEecCCCCCccccCCChhhhhHHHHhcc
Q 006689 316 KEWTSRAEICDGLHEPVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLK 395 (635)
Q Consensus 316 ~~W~~lv~~~~~~~~~v~IalVGkY~~l~DaY~SI~~AL~~ag~~~~vkl~i~wi~s~~le~~~~~~~p~~y~~a~~~L~ 395 (635)
.-|+.+++++.++..+++|||||||...+++|.|+.++|+++|+++..++.+.|+++++++......+++.|+++|+.+.
T Consensus 10 ~~~~~~~~~~~~~~~~~~Iavv~d~~~~~~s~~si~~~L~~~G~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 89 (289)
T 2v4u_A 10 GVDLGTENLYFQSMKICSIALVGKYTKLRDCYASVFKALEHSALAINHKLNLMYIDSIDLEKITETEDPVKFHEAWQKLC 89 (289)
T ss_dssp -------------CEEEEEEEEESCSSCCGGGHHHHHHHHHHHHHTTEEEEEEEEEGGGGSHHHHHHCHHHHHHHHHHHH
T ss_pred hHHHHHHHHhhCcCCceEEEEEecCcCCCccHHHHHHHHHHhhhhhCCceEEEEechhhcccccccCChhhhhhHHHHHh
Confidence 35999999999988889999999997788899999999999999998889999999887654322235667888888899
Q ss_pred CCCEEEECCCCCCCcchhHHHHHHHHHHcCCCEEEEehhHHHHHHHHhcccccccCCCCCccCCCCCCCeeeeCCCCCcC
Q 006689 396 GADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKT 475 (635)
Q Consensus 396 ~~DGIllPGGfG~rg~eg~i~air~are~~iP~LGICLGmQllaie~GrnV~glkda~S~Ef~~~~~~pvi~~mpe~~~~ 475 (635)
++||||||||||++...+.++++++++++++|+||||+|||+|+.++|++|.+++++++.|++++.+.|++.+||+....
T Consensus 90 ~~dgiil~GG~~~~~~~~~~~~i~~~~~~~~PilGIC~G~Q~l~~a~Gg~v~~~~~~~~~e~~~~~~~~~i~~~~~h~~~ 169 (289)
T 2v4u_A 90 KADGILVPGGFGIRGTLGKLQAISWARTKKIPFLGVXLGMQLAVIEFARNCLNLKDADSTEFRPNAPVPLVIDMPEHNPG 169 (289)
T ss_dssp HCSEEEECSCCSSTTHHHHHHHHHHHHHTTCCEEEETHHHHHHHHHHHHHHSCCTTEEESTTCTTCSEEEEEECCBCCTT
T ss_pred hCCEEEecCCCCchhHHHHHHHHHHHHHcCCcEEEECccHHHHHHHHhccccccccCcccccCccccccceecchhhccc
Confidence 99999999999998888999999999999999999999999999999999999999999999988889999999876555
Q ss_pred cCCCccccCceeEEEe-cCCchhhhccCCceeEEEEeeeeeeeChhhhhhhcCCCeEEEEEeCCCCeEEEEEeCCCCcEE
Q 006689 476 HMGGTMRLGSRRTYFQ-IKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFI 554 (635)
Q Consensus 476 h~GgtmrLG~~~v~l~-~~~sll~~iyg~~~~I~erHrHrYeVnp~~v~~Le~~Gl~~sa~s~dg~~vE~iE~~~~p~fv 554 (635)
.+|++|++|++++.+. ++ +.+.++++....++++|+|+|+||++.++.+...|++++|+++||.++|++|++++||++
T Consensus 170 ~~~~~~~~g~~~v~~~~~~-s~l~~~~~~~~~v~~~H~H~y~vn~~~v~~l~~~g~~v~A~s~dg~~ieaie~~~~p~~l 248 (289)
T 2v4u_A 170 NLGGTMRLGIRRTVFKTEN-SILRKLYGDVPFIEERHRHRFEVNPNLIKQFEQNDLSFVGQDVDGDRMEIIELANHPYFV 248 (289)
T ss_dssp CSSCBCEEEEEEEEESCSC-CHHHHHTTSCSEEEEEEEECEEECGGGSGGGTTSSEEEEEEETTSCSEEEEEESSSSCEE
T ss_pred ccCCccccceEEEEEecCC-CHHHHhcCCCceEEEecccccccCHHHHHhcccCCeEEEEEcCCCCeEEEEEcCCCCeEE
Confidence 6789999999999997 45 788888864457889999999999999988844899999999998569999999999999
Q ss_pred EEcccCCCcCCCCCchHHHHHHHHHHhcchhhhhcccC
Q 006689 555 GVQFHPEYKSRPGKPSPLFLGLIAAACGQLDTLIQGSG 592 (635)
Q Consensus 555 GVQFHPE~ss~p~~p~pLF~~Fv~aa~~~~~~~~~~~~ 592 (635)
|||||||+.++|.+++++|.+|++++.+++.+++++.+
T Consensus 249 GvQfHPE~~~~~~~~~~lf~~Fv~~~~~~~~~~~~~~~ 286 (289)
T 2v4u_A 249 GVQFHPEFSSRPMKPSPPYLGLLLAATGNLNAYLQQGC 286 (289)
T ss_dssp EESSBGGGGCBTTBCCHHHHHHHHHHHTCHHHHHHTTC
T ss_pred EEECCCCCCCCCCchHHHHHHHHHHHHhhhhhhhhccc
Confidence 99999999999888899999999999999998886544
No 7
>2w7t_A CTP synthetase, putative cytidine triphosphate synthase; glutaminase domain, trypsanosoma brucei, ligase, acivicin; HET: 5CS; 2.10A {Trypanosoma brucei}
Probab=100.00 E-value=9.3e-46 Score=380.75 Aligned_cols=251 Identities=43% Similarity=0.709 Sum_probs=217.1
Q ss_pred cEEEEEecc-CCCcchHHHHHHHHHHccccceeeeEEEEecCCCCCccccCCChhhhhHHHHhccCCCEEEECCCCCCCc
Q 006689 332 VRIAMVGKY-TGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRG 410 (635)
Q Consensus 332 v~IalVGkY-~~l~DaY~SI~~AL~~ag~~~~vkl~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIllPGGfG~rg 410 (635)
++||||||| +.+.|+|.|+.++|++++.++.+++.+.|+++++++..+. ..+++.+.++||||||||||++.
T Consensus 9 ~~Iaivg~y~~~~~dny~S~~~aL~~~g~~~~~~v~v~~~~~~~~~~~~~-------~~~~~~~~~~dgiil~GG~~~~~ 81 (273)
T 2w7t_A 9 VRIAFVGKYLQDAGDTYFSVLQCFEHCQIALQVRLDILYVDSEELEGPNA-------DEARKALLGCDGIFVPGGFGNRG 81 (273)
T ss_dssp EEEEEEECCHHHHTTTTHHHHHHHHHHHHHHTCCEEEEEEEGGGGSSTTT-------HHHHHHHHTCSEEEECCCCTTTT
T ss_pred CEEEEEeCCCcCCchHHHHHHHHHHHHHHhcCCceEEeccChhhcccccc-------hhHHHHHhhCCEEEecCCCCCcC
Confidence 899999999 6888999999999999999999899999999877643210 01235678999999999999998
Q ss_pred chhHHHHHHHHHHcCCCEEEEehhHHHHHHHHhcccccccCCCCCccCCCCCCCeeeeCCCCCcCcCCCccccCceeEEE
Q 006689 411 VQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRTYF 490 (635)
Q Consensus 411 ~eg~i~air~are~~iP~LGICLGmQllaie~GrnV~glkda~S~Ef~~~~~~pvi~~mpe~~~~h~GgtmrLG~~~v~l 490 (635)
.++.+.++++++++++|+||||+|||+|+.++|++|.++++++|+|++++++.|++.+|+ .....++++|++|.+++.+
T Consensus 82 ~~~~~~~i~~~~~~~~PilGIC~G~Qll~~a~Gg~v~~~~~~~s~E~~~~~~~~~l~~~~-~~~~~~~~~~~~g~~~v~~ 160 (273)
T 2w7t_A 82 VDGKCAAAQVARMNNIPYFGVXLGMQVAVIELSRNVVGWSDANSEEFNKESTHQVVRIMD-CDRNKMGANMHLGACDVYI 160 (273)
T ss_dssp HHHHHHHHHHHHHHTCCEEEETHHHHHHHHHHHHHTTCCTTCEETTTCTTCSCEEEECCG-GGBCSSCBCCEEEEEEEEE
T ss_pred chhHHHHHHHHHHCCCcEEEECcCHHHHHHHHhCccccccCCchhhcccccCCCceeecc-ccccccCCcccccceEEEE
Confidence 889999999999999999999999999999999999999999999998888888887774 3334456788999999998
Q ss_pred ec-CCchhhhccCCceeEEEEeeeeeeeChhhhhhhcCCCeEEEEEeCC----CCeEEEEEeCCCCcEEEEcccCCCcCC
Q 006689 491 QI-KDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDET----SQRMEIVELPNHPYFIGVQFHPEYKSR 565 (635)
Q Consensus 491 ~~-~~sll~~iyg~~~~I~erHrHrYeVnp~~v~~Le~~Gl~~sa~s~d----g~~vE~iE~~~~p~fvGVQFHPE~ss~ 565 (635)
.. + +.+.++|+....++++|+|||+|+++.++.+++.|++++|+++| |..+|++|++++||++|||||||++++
T Consensus 161 ~~~~-s~l~~~~~~~~~v~~~H~Hsy~v~~~~v~~l~~~g~~v~A~s~d~~~~g~~ieaie~~~~p~~~GvQfHPE~~~~ 239 (273)
T 2w7t_A 161 VEKS-SIMAKIYSKSNIVVERHRHRYEVNTAYFEDLRKAGLCISAVTDPTFSSRCRVEAVENPSLRFFLAVQFHPEFIST 239 (273)
T ss_dssp CCTT-SHHHHHTTTCSEEEEEEEECCEECGGGHHHHHHTTCEEEEESCTTCCTTCCEEEEECTTSSSEEEESSCGGGSCB
T ss_pred ecCC-cHHHHHhCCCceEEeecccccccCHHHHHhhccCCcEEEEEcCCcCCCCCeEEEEEcCCCCeEEEEeCCCCcCCC
Confidence 64 5 67788886566789999999999999888775689999999998 546999999999999999999999999
Q ss_pred CCCchHHHHHHHHHHhcchhhhhccc
Q 006689 566 PGKPSPLFLGLIAAACGQLDTLIQGS 591 (635)
Q Consensus 566 p~~p~pLF~~Fv~aa~~~~~~~~~~~ 591 (635)
+.++++||.+|+++|.+++++++++.
T Consensus 240 ~~~~~~l~~~Fv~~~~~~~~~~~~~~ 265 (273)
T 2w7t_A 240 PMDPAPTYLSFMAAAAKKDYVWPQKC 265 (273)
T ss_dssp TTBCCHHHHHHHHHHHTCCCCCCSSC
T ss_pred CCchHHHHHHHHHHHHHHHHhhhhcC
Confidence 98789999999999999888877543
No 8
>1a9x_B Carbamoyl phosphate synthetase (small chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: c.8.3.1 c.23.16.1 PDB: 1bxr_B* 1ce8_B* 1jdb_C* 1cs0_B* 1m6v_B* 1c30_B* 1c3o_B* 1kee_B* 1t36_B*
Probab=100.00 E-value=1.3e-40 Score=357.08 Aligned_cols=291 Identities=21% Similarity=0.280 Sum_probs=220.4
Q ss_pred eeeeeeecCCCccccCCccchhhhhhcCCCcccEEEEeeCCCCChhhhccccccCCCCCCCeeeeCCCCCcchhhHHHHH
Q 006689 214 VSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRSTVALDDNVKGKLSQFCHVPEQNIITLYDVPNIWHIPLLLRD 293 (635)
Q Consensus 214 v~~vp~~~~~~e~KtKptQ~svk~Lrs~Gi~pd~iv~R~~~~l~~~~r~Kislfc~v~~~~Vi~i~dvdt~y~vpl~Lre 293 (635)
+---|.|+..|=-+ .+.||.++++.++|||+.++.++|||++.||..|+++++|++|.+|||| +|+++||+
T Consensus 53 ~~t~P~iGn~Gv~~--------~d~es~~~~~~g~vv~~~~~~~s~~~~~~~l~~~l~~~~i~gi~giDTR-~lt~~iR~ 123 (379)
T 1a9x_B 53 TLTYPHIGNVGTND--------ADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTR-KLTRLLRE 123 (379)
T ss_dssp EECSSBCCTTCCCG--------GGCSSSSCCBSEEECSBCCSCCCCTTCCSCHHHHHHHTTCEEEESSCHH-HHHHHHHH
T ss_pred EEcCCCccEEccCc--------hhhccccceEEEEEEccCCCCCCcccccCCHHHHHHHCCCccccCCCHH-HHHHHHHh
Confidence 33457776666433 3789999999999999999999999999999999999999999999999 99999999
Q ss_pred hhhHHHHHHhc-CCCCCCCccchHHHH-----HHHHHhcCC-------CC----------------ccEEEEEeccCCCc
Q 006689 294 QKAHEAIFKVL-NLQGTTKEPLLKEWT-----SRAEICDGL-------HE----------------PVRIAMVGKYTGLS 344 (635)
Q Consensus 294 qG~~~~i~~~l-~l~~~~~~~~l~~W~-----~lv~~~~~~-------~~----------------~v~IalVGkY~~l~ 344 (635)
+|+|++++..- ..+.......+..|. +++..++.. .. ..+|+++ ||+
T Consensus 124 ~G~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~vs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~vi-D~G--- 199 (379)
T 1a9x_B 124 KGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPQAKKEDELPFHVVAY-DFG--- 199 (379)
T ss_dssp HCCEEEEEEESSSCCHHHHHHHHHHCCCSTTCBCHHHHSCSSCEEECCCCCBTTTBSCCCCCGGGCCEEEEEE-ESS---
T ss_pred cCCeeEEEecCCCCCHHHHHHHHHhCCCccccCccceeCCCCCEEeCCCCcccccccccccccccCCCEEEEE-ECC---
Confidence 99999877542 111000000122231 344544431 11 3689999 686
Q ss_pred chHHHHHHHHHHccccceeeeEEEEecCCCCCccccCCChhhhhHHHHh-ccCCCEEEECCCCCCCc-chhHHHHHHHHH
Q 006689 345 DAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKL-LKGADGILVPGGFGNRG-VQGKILAAKYAR 422 (635)
Q Consensus 345 DaY~SI~~AL~~ag~~~~vkl~i~wi~s~~le~~~~~~~p~~y~~a~~~-L~~~DGIllPGGfG~rg-~eg~i~air~ar 422 (635)
...|++++|+.+|+.+.+. +.++ + +.+. ..++||||||||||++. ....+++++++.
T Consensus 200 -~k~ni~r~L~~~G~~v~vv----p~~~-~---------------~e~i~~~~~DGliLsGGPgdp~~~~~~~~~Ir~~~ 258 (379)
T 1a9x_B 200 -AKRNILRMLVDRGCRLTIV----PAQT-S---------------AEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFL 258 (379)
T ss_dssp -CCHHHHHHHHHTTEEEEEE----ETTC-C---------------HHHHHTTCCSEEEECCCSBCSTTCHHHHHHHHHHT
T ss_pred -ChHHHHHHHHHCCCEEEEE----eccC-C---------------HHHHhhcCCCEEEEeCCCCChHHHHHHHHHHHHHH
Confidence 4478999999999876542 2221 1 1111 23799999999999986 467889999999
Q ss_pred HcCCCEEEEehhHHHHHHHHhcccccccCCCCCccCCCCCCCeeeeCCCCCcCcCCCccccCceeEEEecCCchhhhccC
Q 006689 423 EHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRTYFQIKDCKSAKLYG 502 (635)
Q Consensus 423 e~~iP~LGICLGmQllaie~GrnV~glkda~S~Ef~~~~~~pvi~~mpe~~~~h~GgtmrLG~~~v~l~~~~sll~~iyg 502 (635)
+.++|+||||||||+|+.++|++|.+++ + +|+|+ ++|+.....
T Consensus 259 ~~~~PILGIClG~QLLa~A~GG~v~k~~------~-----------------gh~g~-----n~pv~~~~~--------- 301 (379)
T 1a9x_B 259 ETDIPVFGICLGHQLLALASGAKTVKMK------F-----------------GHHGG-----NHPVKDVEK--------- 301 (379)
T ss_dssp TSCCCEEEETHHHHHHHHHTTCCEEEEE------E-----------------EEEEE-----EEEEEETTT---------
T ss_pred HcCCCEEEECchHHHHHHHhCcEEEecc------c-----------------ccccC-----ceeeEecCC---------
Confidence 9899999999999999999999997753 2 56665 567653322
Q ss_pred CceeEEEEeeeeeeeChhhhhhhcCCCeEEEEEe-CCCCeEEEEEeCCCCcEEEEcccCCCcCCCCCchHHHHHHHHHHh
Q 006689 503 NRTFIDERHRHRYEVNPDMIARLENAGLSFTGKD-ETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAAC 581 (635)
Q Consensus 503 ~~~~I~erHrHrYeVnp~~v~~Le~~Gl~~sa~s-~dg~~vE~iE~~~~p~fvGVQFHPE~ss~p~~p~pLF~~Fv~aa~ 581 (635)
++..+ ..++|+|+|+++. + +.++++++++ +|+. +|+++++++| ++|||||||++++|.+..+||++|++++.
T Consensus 302 g~v~i-ts~~H~~aV~~~~---L-p~~~~v~a~s~~Dg~-ieai~~~~~p-i~gVQFHPE~~~~p~d~~~Lf~~Fl~~~~ 374 (379)
T 1a9x_B 302 NVVMI-TAQNHGFAVDEAT---L-PANLRVTHKSLFDGT-LQGIHRTDKP-AFSFQGNPEASPGPHDAAPLFDHFIELIE 374 (379)
T ss_dssp TEEEE-EEEEEEEEECSTT---C-CTTEEEEEEETTTCC-EEEEEESSSS-EEEESSCTTCSSSCSTTTHHHHHHHHHHH
T ss_pred CcEEE-EecCccceEeccc---C-CCCeEEEEEeCCCCc-EEEEEECCCC-EEEEEeCCcCCCCcccHHHHHHHHHHHHH
Confidence 13334 3578999998653 3 5689999999 6776 9999999988 57999999999999989999999999886
Q ss_pred c
Q 006689 582 G 582 (635)
Q Consensus 582 ~ 582 (635)
+
T Consensus 375 ~ 375 (379)
T 1a9x_B 375 Q 375 (379)
T ss_dssp H
T ss_pred H
Confidence 4
No 9
>3fij_A LIN1909 protein; 11172J, uncharacterized protein, nysgrc, PSI-II, structural genomics, protein structure initiative; 2.30A {Listeria innocua}
Probab=99.95 E-value=3e-27 Score=240.13 Aligned_cols=208 Identities=20% Similarity=0.275 Sum_probs=144.5
Q ss_pred cEEEEEeccCC----------CcchHHHHHHHHHHccccceeeeEEEEecCCCCCccccCCChhhhhHHHHhccCCCEEE
Q 006689 332 VRIAMVGKYTG----------LSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGIL 401 (635)
Q Consensus 332 v~IalVGkY~~----------l~DaY~SI~~AL~~ag~~~~vkl~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIl 401 (635)
+.|+|..++.. ..-.+.+.+++|+.+|+...+ ++...-. . +.+.+..+||||
T Consensus 5 p~IGi~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~~pv~------lp~~~~~-----------~-~~~~l~~~DGli 66 (254)
T 3fij_A 5 PVIGITGNRLVKGVDVFYGHRVTYTQQRYVDAIQKVGGFPIA------LPIDDPS-----------T-AVQAISLVDGLL 66 (254)
T ss_dssp CEEEEEC------------------CHHHHHHHHHHTCEEEE------ECCCCGG-----------G-HHHHHHTCSEEE
T ss_pred CEEEEeCCcccccccccCCcchhhhhHHHHHHHHHCCCEEEE------EeCCCch-----------H-HHHHHhhCCEEE
Confidence 56888765311 111246788999999987543 2221100 0 224577899999
Q ss_pred ECCCCC-------CCcc-----------hhHHHHHHHHHHcCCCEEEEehhHHHHHHHHhcccccccCCCCCccCCCCCC
Q 006689 402 VPGGFG-------NRGV-----------QGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKN 463 (635)
Q Consensus 402 lPGGfG-------~rg~-----------eg~i~air~are~~iP~LGICLGmQllaie~GrnV~glkda~S~Ef~~~~~~ 463 (635)
||||++ .... ...+.++++++++++|+||||+|||+|+.++|+++... ..+. . .
T Consensus 67 l~GG~~v~P~~yg~~~~~~~~~~~~~rd~~~~~lir~a~~~~~PiLGIC~G~Qll~~a~Gg~v~~~--~~~~-~-----~ 138 (254)
T 3fij_A 67 LTGGQDITPQLYLEEPSQEIGAYFPPRDSYEIALVRAALDAGKPIFAICRGMQLVNVALGGTLYQD--ISQV-E-----T 138 (254)
T ss_dssp ECCCSCCCGGGGTCCCCTTCCCCCHHHHHHHHHHHHHHHHTTCCEEEETHHHHHHHHHTTCCEESS--GGGS-S-----S
T ss_pred ECCCCCCChhhcCCccCcccCCcChhhhHHHHHHHHHHHHcCCCEEEECHHHHHHHHHhCCceecc--cccc-c-----C
Confidence 999965 2211 23789999999999999999999999999999998542 2111 0 0
Q ss_pred CeeeeCCCCCcCcCC-CccccCceeEEEecCCchhhhccCCceeEEEEeeeeeeeChhhhhhhcCCCeEEEEEeCCCCeE
Q 006689 464 PCVIFMPEGSKTHMG-GTMRLGSRRTYFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRM 542 (635)
Q Consensus 464 pvi~~mpe~~~~h~G-gtmrLG~~~v~l~~~~sll~~iyg~~~~I~erHrHrYeVnp~~v~~Le~~Gl~~sa~s~dg~~v 542 (635)
+. ..|+. ..+++|.+++.+.++ +.+.+.+++...+++ .|++.|. .+ +.|++++|+++||. +
T Consensus 139 ~~--------~~h~~~~~~~~g~~~v~~~~~-s~l~~~~~~~~~v~~--~H~~~v~-----~l-~~g~~v~a~s~dg~-i 200 (254)
T 3fij_A 139 KA--------LQHLQRVDEQLGSHTIDIEPT-SELAKHHPNKKLVNS--LHHQFIK-----KL-APSFKVTARTADGM-I 200 (254)
T ss_dssp CC--------CCCBCCSCTTSCCEEEEECTT-SSGGGTCCTTEEECC--BCSCEES-----SC-CSSEEEEEEETTCC-E
T ss_pred cc--------ccccCCCCCccceEEEEeCCC-ChHHHhcCCcEEEEE--eccchhh-----cc-CCCcEEEEEeCCCc-E
Confidence 11 12221 235677899999887 666677765444444 4566664 33 67999999999996 9
Q ss_pred EEEEeC-CCCcEEEEcccCCCcCCCCC-chHHHHHHHHHHhcc
Q 006689 543 EIVELP-NHPYFIGVQFHPEYKSRPGK-PSPLFLGLIAAACGQ 583 (635)
Q Consensus 543 E~iE~~-~~p~fvGVQFHPE~ss~p~~-p~pLF~~Fv~aa~~~ 583 (635)
|+++.+ ++||++|||||||++++|.+ ..+||++|+++|..+
T Consensus 201 eai~~~~~~~~~~gvQfHPE~~~~~~~~~~~lf~~Fv~~~~~~ 243 (254)
T 3fij_A 201 EAVEGDNLPSWYLGVQWHPELMFQTDPESEQLFQALVDESKKT 243 (254)
T ss_dssp EEEEESSCSSCEEEESSCGGGTGGGCHHHHHHHHHHHHHHHSC
T ss_pred EEEEecCCCCeEEEEEcCCccCCCCCchHHHHHHHHHHHHHHH
Confidence 999999 99989999999999998653 378999999998764
No 10
>2a9v_A GMP synthase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, ligase; 2.24A {Thermoplasma acidophilum} SCOP: c.23.16.1
Probab=99.92 E-value=6e-25 Score=217.58 Aligned_cols=189 Identities=22% Similarity=0.325 Sum_probs=136.4
Q ss_pred CccEEEEEeccCCCcchHHHHHHHHHHccccceeeeEEEEecCCCCCccccCCChhhhhHHHHhccCCCEEEECCC-CCC
Q 006689 330 EPVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGG-FGN 408 (635)
Q Consensus 330 ~~v~IalVGkY~~l~DaY~SI~~AL~~ag~~~~vkl~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIllPGG-fG~ 408 (635)
..+||.+++.|.+.. .++.++|+.+|+.+.+ ++... ++ +.+.++|||||||| +|+
T Consensus 12 ~~~~i~~id~~~~~~---~~~~~~l~~~G~~~~v------v~~~~--------~~-------~~l~~~DglIl~GG~p~~ 67 (212)
T 2a9v_A 12 HMLKIYVVDNGGQWT---HREWRVLRELGVDTKI------VPNDI--------DS-------SELDGLDGLVLSGGAPNI 67 (212)
T ss_dssp CCCBEEEEEESCCTT---CHHHHHHHHTTCBCCE------EETTS--------CG-------GGGTTCSEEEEEEECSCG
T ss_pred ccceEEEEeCCCccH---HHHHHHHHHCCCEEEE------EeCCC--------CH-------HHHhCCCEEEECCCCCCC
Confidence 457999997665443 4678999999987654 22211 01 34566999999999 787
Q ss_pred Ccch-hHHHHHHHHHHcCCCEEEEehhHHHHHHHHhcccccccCCCCCccCCCCCCCeeeeCCCCCcCcCCCccccCcee
Q 006689 409 RGVQ-GKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRR 487 (635)
Q Consensus 409 rg~e-g~i~air~are~~iP~LGICLGmQllaie~GrnV~glkda~S~Ef~~~~~~pvi~~mpe~~~~h~GgtmrLG~~~ 487 (635)
+..+ ......++++++++|+||||+|||+|+.++|+++...+ .+++| .++
T Consensus 68 ~~~~~~~~~l~~~~~~~~~PiLGIC~G~Qll~~~lGg~v~~~~-----------------------~~~~G------~~~ 118 (212)
T 2a9v_A 68 DEELDKLGSVGKYIDDHNYPILGICVGAQFIALHFGASVVKAK-----------------------HPEFG------KTK 118 (212)
T ss_dssp GGTGGGHHHHHHHHHHCCSCEEEETHHHHHHHHHTTCEEEEEE-----------------------EEEEE------EEE
T ss_pred CcccccchhHHHHHHhCCCCEEEEChHHHHHHHHhCCEEEcCC-----------------------CcccC------cee
Confidence 6432 23344566778999999999999999999999886432 02233 456
Q ss_pred EEEecCCchhhhccCCceeEEEEeeeeeeeChhhhhhhcCCCeEEEEEeCCCCeEEEEEeCCCCcEEEEcccCCCcCCCC
Q 006689 488 TYFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPG 567 (635)
Q Consensus 488 v~l~~~~sll~~iyg~~~~I~erHrHrYeVnp~~v~~Le~~Gl~~sa~s~dg~~vE~iE~~~~p~fvGVQFHPE~ss~p~ 567 (635)
+.+.+++.++..+ ++. ...+|.|+|+|. .+ +.+++++|+++|+. +++++.++++ ++|+|||||++.++.
T Consensus 119 v~~~~~~~l~~~~-~~~--~~v~~~H~~~v~-----~l-~~~~~vlA~s~d~~-i~ai~~~~~~-i~gvQfHPE~~~~~~ 187 (212)
T 2a9v_A 119 VSVMHSENIFGGL-PSE--ITVWENHNDEII-----NL-PDDFTLAASSATCQ-VQGFYHKTRP-IYATQFHPEVEHTQY 187 (212)
T ss_dssp EEESCCCGGGTTC-CSE--EEEEEEEEEEEE-----SC-CTTEEEEEECSSCS-CSEEEESSSS-EEEESSCTTSTTSTT
T ss_pred eEECCCChhHhcC-CCc--eEEEeEhhhhHh-----hC-CCCcEEEEEeCCCC-EEEEEECCCC-EEEEEeCCCCCCCcc
Confidence 6666653444433 322 445788999874 22 57899999999886 9999998877 679999999998664
Q ss_pred CchHHHHHHHHHHhcc
Q 006689 568 KPSPLFLGLIAAACGQ 583 (635)
Q Consensus 568 ~p~pLF~~Fv~aa~~~ 583 (635)
+.++|++|+++|..+
T Consensus 188 -g~~l~~~F~~~~~~~ 202 (212)
T 2a9v_A 188 -GRDIFRNFIGICASY 202 (212)
T ss_dssp -HHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHh
Confidence 689999999987653
No 11
>1qdl_B Protein (anthranilate synthase (TRPG-SUBUNIT)); tryptophan biosynthesis, glutamine amidotransferase, allosteric interaction, lyase; 2.50A {Sulfolobus solfataricus} SCOP: c.23.16.1
Probab=99.92 E-value=2.4e-24 Score=209.90 Aligned_cols=181 Identities=18% Similarity=0.256 Sum_probs=128.5
Q ss_pred EEEEeccCCCcchHHHHHHHHHHccccceeeeEEEEecCCCCCccccCCChhhhhHHHHhcc--CCCEEEECCCCCCCcc
Q 006689 334 IAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLK--GADGILVPGGFGNRGV 411 (635)
Q Consensus 334 IalVGkY~~l~DaY~SI~~AL~~ag~~~~vkl~i~wi~s~~le~~~~~~~p~~y~~a~~~L~--~~DGIllPGGfG~rg~ 411 (635)
|+||+.+.+. . .++.++|+.+|+++.+ .+.+..++ +.+. ++|||++|||+|++..
T Consensus 4 i~iid~~~s~--~-~~~~~~l~~~G~~~~v----~~~~~~~~----------------~~~~~~~~dglil~gG~~~~~~ 60 (195)
T 1qdl_B 4 TLIIDNYDSF--V-YNIAQIVGELGSYPIV----IRNDEISI----------------KGIERIDPDRLIISPGPGTPEK 60 (195)
T ss_dssp EEEEECSCSS--H-HHHHHHHHHTTCEEEE----EETTTSCH----------------HHHHHHCCSEEEECCCSSCTTS
T ss_pred EEEEECCCch--H-HHHHHHHHhCCCEEEE----EeCCCCCH----------------HHHhhCCCCEEEECCCCCChhh
Confidence 9999766544 2 3678999999977544 22221111 1222 6999999999998754
Q ss_pred ---h-hHHHHHHHHHHcCCCEEEEehhHHHHHHHHhcccccccCCCCCccCCCCCCCeeeeCCCCCcCcCCCccccCcee
Q 006689 412 ---Q-GKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRR 487 (635)
Q Consensus 412 ---e-g~i~air~are~~iP~LGICLGmQllaie~GrnV~glkda~S~Ef~~~~~~pvi~~mpe~~~~h~GgtmrLG~~~ 487 (635)
. ...+.++++ +.++|+||||+|||+|+.++|++|...+. ..| |+ .++
T Consensus 61 ~~~~~~~~~~i~~~-~~~~PvLGIC~G~QlL~~~~gg~v~~~~~----------------------~~~-g~-----~~~ 111 (195)
T 1qdl_B 61 REDIGVSLDVIKYL-GKRTPILGVCLGHQAIGYAFGAKIRRARK----------------------VFH-GK-----ISN 111 (195)
T ss_dssp HHHHTTHHHHHHHH-TTTSCEEEETHHHHHHHHHTTCEEEEEEE----------------------EEE-EE-----EEE
T ss_pred hhhhhHHHHHHHHh-cCCCcEEEEehHHHHHHHHhCCEEeccCC----------------------CcC-CC-----ceE
Confidence 2 235777775 77999999999999999999999865321 012 22 234
Q ss_pred EEEecCC--chhhhccCCceeEEEEeeeeeeeChhhhhhhcCCCeEEEEEe-CCCCeEEEEEeCCCCcEEEEcccCCCcC
Q 006689 488 TYFQIKD--CKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKD-ETSQRMEIVELPNHPYFIGVQFHPEYKS 564 (635)
Q Consensus 488 v~l~~~~--sll~~iyg~~~~I~erHrHrYeVnp~~v~~Le~~Gl~~sa~s-~dg~~vE~iE~~~~p~fvGVQFHPE~ss 564 (635)
+.+.+++ .++..+ ++ ....++.|+|.|. .+ +.+++++|++ ++|. +++++.++++ ++|+|||||++.
T Consensus 112 v~~~~~~~~~l~~~~-~~--~~~v~~~H~~~v~-----~l-~~~~~vla~s~~~g~-i~a~~~~~~~-~~gvQfHPE~~~ 180 (195)
T 1qdl_B 112 IILVNNSPLSLYYGI-AK--EFKATRYHSLVVD-----EV-HRPLIVDAISAEDNE-IMAIHHEEYP-IYGVQFHPESVG 180 (195)
T ss_dssp EEECCSSCCSTTTTC-CS--EEEEEEEEEEEEE-----CC-CTTEEEEEEESSSCC-EEEEEESSSS-EEEESSBTTSTT
T ss_pred EEECCCCHhHHHhcC-CC--ceEEeccccchhh-----hC-CCCcEEEEEECCCCc-EEEEEeCCCC-EEEEecCCCCCC
Confidence 5554553 344433 32 3456778999885 23 6789999999 8886 9999999887 679999999998
Q ss_pred CCCCchHHHHHHHH
Q 006689 565 RPGKPSPLFLGLIA 578 (635)
Q Consensus 565 ~p~~p~pLF~~Fv~ 578 (635)
++ .+.++|++|++
T Consensus 181 ~~-~g~~l~~~f~~ 193 (195)
T 1qdl_B 181 TS-LGYKILYNFLN 193 (195)
T ss_dssp CT-THHHHHHHHHH
T ss_pred Cc-cHHHHHHHHHh
Confidence 66 47899999987
No 12
>4gud_A Imidazole glycerol phosphate synthase subunit His; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE 1PE; 1.91A {Vibrio cholerae}
Probab=99.92 E-value=2.5e-25 Score=218.24 Aligned_cols=199 Identities=16% Similarity=0.184 Sum_probs=124.1
Q ss_pred EEEEEeccCCCcchHHHHHHHHHHccccceeeeEEEEecCCCCCccccCCChhhhhHHHHhccCCCEEEECCCCCCCcch
Q 006689 333 RIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRGVQ 412 (635)
Q Consensus 333 ~IalVGkY~~l~DaY~SI~~AL~~ag~~~~vkl~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIllPGGfG~rg~e 412 (635)
||+|| ||+.. +..||.+||+++|+++.+. . +| +.+.++||||+|| +|+++..
T Consensus 4 ~I~ii-D~g~~--n~~si~~al~~~G~~~~v~------~-----------~~-------~~l~~~D~lilPG-~g~~~~~ 55 (211)
T 4gud_A 4 NVVII-DTGCA--NISSVKFAIERLGYAVTIS------R-----------DP-------QVVLAADKLFLPG-VGTASEA 55 (211)
T ss_dssp CEEEE-CCCCT--THHHHHHHHHHTTCCEEEE------C-----------CH-------HHHHHCSEEEECC-CSCHHHH
T ss_pred EEEEE-ECCCC--hHHHHHHHHHHCCCEEEEE------C-----------CH-------HHHhCCCEEEECC-CCCHHHH
Confidence 69999 79854 6799999999999986542 1 12 4567899999996 4554321
Q ss_pred ----hHHHHHHHHHHcCCCEEEEehhHHHHHHHHhcccccccCCCCCccCCCCCCCeeeeCCC-CCcCcCCCccccCcee
Q 006689 413 ----GKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPE-GSKTHMGGTMRLGSRR 487 (635)
Q Consensus 413 ----g~i~air~are~~iP~LGICLGmQllaie~GrnV~glkda~S~Ef~~~~~~pvi~~mpe-~~~~h~GgtmrLG~~~ 487 (635)
.....++.+++.++|+||||+|||+|+.++++++...... .+.-...+.+|..+... ....++|+ ..
T Consensus 56 ~~~~~~~~~i~~~~~~~~PvlGIClG~QlL~~~~g~~~~~~~~~--~~gl~~~~~~v~~~~~~~~~~~~~~~------~~ 127 (211)
T 4gud_A 56 MKNLTERDLIELVKRVEKPLLGICLGMQLLGKLSEEKGQKADEI--VQCLGLVDGEVRLLQTGDLPLPHMGW------NT 127 (211)
T ss_dssp HHHHHHTTCHHHHHHCCSCEEEETHHHHTTSSEECCC----CCC--EECCCSSSCEEEECCCTTSCSSEEEE------EC
T ss_pred HHHHHhcChHHHHHHcCCCEEEEchhHhHHHHHhCCcccccCCc--cccceeccceEEEcccCCcceeeccc------ee
Confidence 1223467788899999999999999999988887543321 11111123333332211 12233333 33
Q ss_pred EEEecCCchhhhccCCceeEEEEeeeeeeeChhhhhhhcCCCeEEEEEeCCCCeEEEEEeCCCCcEEEEcccCCCcCCCC
Q 006689 488 TYFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPG 567 (635)
Q Consensus 488 v~l~~~~sll~~iyg~~~~I~erHrHrYeVnp~~v~~Le~~Gl~~sa~s~dg~~vE~iE~~~~p~fvGVQFHPE~ss~p~ 567 (635)
+.....++++..+.. ...+ ++.|+|.+.+ +..++|++++|. ..++.+.+.| ++|||||||.+ ++
T Consensus 128 ~~~~~~~~l~~~l~~-~~~~--~~~H~~~v~~---------~~~~~a~~~~g~-~~~~~v~~~~-v~GvQFHPE~s-~~- 191 (211)
T 4gud_A 128 VQVKEGHPLFNGIEP-DAYF--YFVHSFAMPV---------GDYTIAQCEYGQ-PFSAAIQAGN-YYGVQFHPERS-SK- 191 (211)
T ss_dssp CEECTTCGGGTTCCT-TCCE--EEEESEECCC---------CTTEEEEEESSS-EEEEEEEETT-EEEESSCGGGS-HH-
T ss_pred eeeeccChhhcCCCC-CcEE--EEEeeEEeCC---------CCeEEEEecCCC-eEEEEEeCCC-EEEEEccCEec-Cc-
Confidence 344444466666653 4334 4668887753 234678888887 5566666677 56999999975 32
Q ss_pred CchHHHHHHHHHHhcc
Q 006689 568 KPSPLFLGLIAAACGQ 583 (635)
Q Consensus 568 ~p~pLF~~Fv~aa~~~ 583 (635)
++..+|++|++.+.+.
T Consensus 192 ~G~~ll~nFl~~~ge~ 207 (211)
T 4gud_A 192 AGARLIQNFLELRGEN 207 (211)
T ss_dssp HHHHHHHHHHHC----
T ss_pred cHHHHHHHHHHHhccc
Confidence 3678999999876543
No 13
>1wl8_A GMP synthase [glutamine-hydrolyzing] subunit A; transferase, gatases, riken structural genomics/proteomics initiative, RSGI; 1.45A {Pyrococcus horikoshii} SCOP: c.23.16.1 PDB: 2d7j_A
Probab=99.91 E-value=4.2e-24 Score=206.58 Aligned_cols=183 Identities=22% Similarity=0.254 Sum_probs=128.7
Q ss_pred EEEEEeccCCCcchHHHHHHHHHHccccceeeeEEEEecCCCCCccccCCChhhhhHHHHhc--cCCCEEEECCCCCCCc
Q 006689 333 RIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGGFGNRG 410 (635)
Q Consensus 333 ~IalVGkY~~l~DaY~SI~~AL~~ag~~~~vkl~i~wi~s~~le~~~~~~~p~~y~~a~~~L--~~~DGIllPGGfG~rg 410 (635)
.|+|++ |+.. ...++.++|+.+|+.+.+ ++... ++ +.+ .++|||++|||+ ++.
T Consensus 2 mi~iid-~~~~--~~~~~~~~l~~~G~~~~~------~~~~~--------~~-------~~~~~~~~dglil~Gg~-~~~ 56 (189)
T 1wl8_A 2 MIVIMD-NGGQ--YVHRIWRTLRYLGVETKI------IPNTT--------PL-------EEIKAMNPKGIIFSGGP-SLE 56 (189)
T ss_dssp EEEEEE-CSCT--THHHHHHHHHHTTCEEEE------EETTC--------CH-------HHHHHTCCSEEEECCCS-CTT
T ss_pred eEEEEE-CCCc--hHHHHHHHHHHCCCeEEE------EECCC--------Ch-------HHhcccCCCEEEECCCC-Chh
Confidence 489995 5432 356889999999987554 22111 00 122 369999999998 654
Q ss_pred chh-HHHHHHHHHHcCCCEEEEehhHHHHHHHHhcccccccCCCCCccCCCCCCCeeeeCCCCCcCcCCCccccCceeEE
Q 006689 411 VQG-KILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRTY 489 (635)
Q Consensus 411 ~eg-~i~air~are~~iP~LGICLGmQllaie~GrnV~glkda~S~Ef~~~~~~pvi~~mpe~~~~h~GgtmrLG~~~v~ 489 (635)
..+ ..+.++.+.+.++|+||||+|||+|+.++|+++..++. +++|+ .++.
T Consensus 57 ~~~~~~~~i~~~~~~~~PilGIC~G~Q~l~~~~gg~v~~~~~-----------------------~~~G~------~~~~ 107 (189)
T 1wl8_A 57 NTGNCEKVLEHYDEFNVPILGICLGHQLIAKFFGGKVGRGEK-----------------------AEYSL------VEIE 107 (189)
T ss_dssp CCTTHHHHHHTGGGTCSCEEEETHHHHHHHHHHTCEEEECSC-----------------------CSCEE------EEEE
T ss_pred hhhhHHHHHHHHhhCCCeEEEEcHHHHHHHHHhCCceecCCC-----------------------cccCc------eeEE
Confidence 333 46777777688999999999999999999999865321 23343 2334
Q ss_pred EecCCchhhhccCCceeEEEEeeeeeeeChhhhhhhcCCCeEEEEEeCCCCeEEEEEeCCCCcEEEEcccCCCcCCCCCc
Q 006689 490 FQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKP 569 (635)
Q Consensus 490 l~~~~sll~~iyg~~~~I~erHrHrYeVnp~~v~~Le~~Gl~~sa~s~dg~~vE~iE~~~~p~fvGVQFHPE~ss~p~~p 569 (635)
+.++++++..+ ++ .+..+|.|..++. ++ +.+++++|+++||. +++++.+++| ++|+|||||++..+ ++
T Consensus 108 ~~~~~~l~~~~-~~--~~~~~~~h~~~v~-----~l-~~~~~vla~s~~g~-i~a~~~~~~~-~~gvQfHPE~~~~~-~g 175 (189)
T 1wl8_A 108 IIDEXEIFKGL-PK--RLKVWESHMDEVK-----EL-PPKFKILARSETCP-IEAMKHEELP-IYGVQFHPEVAHTE-KG 175 (189)
T ss_dssp ESCC--CCTTS-CS--EEEEEECCSEEEE-----EC-CTTEEEEEEESSCS-CSEEEESSSC-EEEESSCTTSTTST-TH
T ss_pred EecCchHHhCC-CC--ceEEEEEeeeehh-----hC-CCCcEEEEEcCCCC-EEEEEeCCce-EEEEecCCCcCCCc-ch
Confidence 44343555433 22 2445688877663 23 67899999999986 9999999988 67999999998766 46
Q ss_pred hHHHHHHHHHHh
Q 006689 570 SPLFLGLIAAAC 581 (635)
Q Consensus 570 ~pLF~~Fv~aa~ 581 (635)
..+|++|+++|.
T Consensus 176 ~~l~~~f~~~~~ 187 (189)
T 1wl8_A 176 EEILRNFAKLCG 187 (189)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHHHh
Confidence 899999998874
No 14
>2vpi_A GMP synthase; guanine monophosphate synthetase, phosphoprotein, GMP synthetase, GMP biosynthesis, glutamine amidotransferase, ligase, cytoplasm; 2.40A {Homo sapiens}
Probab=99.91 E-value=2e-24 Score=215.20 Aligned_cols=185 Identities=15% Similarity=0.099 Sum_probs=122.7
Q ss_pred cEEEEEeccCCCcchHHHHHHHHHHccccceeeeEEEEecCCCCCccccCCChhhhhHHHHhccCCCEEEECCCCCCCcc
Q 006689 332 VRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRGV 411 (635)
Q Consensus 332 v~IalVGkY~~l~DaY~SI~~AL~~ag~~~~vkl~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIllPGGfG~rg~ 411 (635)
.+|+|+ ||+.. .-.++.++|+.+|+++.+ .++++. .+ +. ...++||||||||++++..
T Consensus 25 ~~I~ii-D~g~~--~~~~i~~~l~~~G~~~~v----v~~~~~-~~------------~l--~~~~~dglil~Gg~~~~~~ 82 (218)
T 2vpi_A 25 GAVVIL-DAGAQ--YGKVIDRRVRELFVQSEI----FPLETP-AF------------AI--KEQGFRAIIISGGPNSVYA 82 (218)
T ss_dssp TCEEEE-ECSTT--TTHHHHHHHHHTTCCEEE----ECTTCC-HH------------HH--HHHTCSEEEEEC-------
T ss_pred CeEEEE-ECCCc--hHHHHHHHHHHCCCEEEE----EECCCC-hH------------HH--hhcCCCEEEECCCCccccc
Confidence 479999 56532 225889999999977543 233221 00 01 1157999999999876531
Q ss_pred hhHHHHHHHHHHcCCCEEEEehhHHHHHHHHhcccccccCCCCCccCCCCCCCeeeeCCCCCcCcCCCccccCceeEEEe
Q 006689 412 QGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRTYFQ 491 (635)
Q Consensus 412 eg~i~air~are~~iP~LGICLGmQllaie~GrnV~glkda~S~Ef~~~~~~pvi~~mpe~~~~h~GgtmrLG~~~v~l~ 491 (635)
+......+.+++.++|+||||+|||+|+.++|++|..++. .++| .+++.+.
T Consensus 83 ~~~~~~~~~~~~~~~PilGIC~G~Qll~~~~GG~v~~~~~-----------------------~~~G------~~~v~~~ 133 (218)
T 2vpi_A 83 EDAPWFDPAIFTIGKPVLGICYGMQMMNKVFGGTVHKKSV-----------------------REDG------VFNISVD 133 (218)
T ss_dssp --CCCCCGGGGTSSCCEEEETHHHHHHHHHTTCCEEEEEE-----------------------CSCE------EEEEEEC
T ss_pred ccchhHHHHHHHcCCCEEEEcHHHHHHHHHhCCceEeCCC-----------------------Cccc------EEEEEEc
Confidence 1111123345678999999999999999999999865321 2333 4567776
Q ss_pred cCCchhhhccCCceeEEEEeeeeeeeChhhhhhhcCCCeEEEEEeCCCCeEEEEEeCCCCcEEEEcccCCCcCCCCCchH
Q 006689 492 IKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSP 571 (635)
Q Consensus 492 ~~~sll~~iyg~~~~I~erHrHrYeVnp~~v~~Le~~Gl~~sa~s~dg~~vE~iE~~~~p~fvGVQFHPE~ss~p~~p~p 571 (635)
+++.++ +.++... ..++.|+|+|. .+ +.+++++|++ ++ .+++++.++++ ++|+|||||++.++. +.+
T Consensus 134 ~~~~l~-~~l~~~~--~v~~~H~~~v~-----~l-~~~~~vlA~s-~~-~i~ai~~~~~~-i~gvQfHPE~~~~~~-g~~ 200 (218)
T 2vpi_A 134 NTCSLF-RGLQKEE--VVLLTHGDSVD-----KV-ADGFKVVARS-GN-IVAGIANESKK-LYGAQFHPEVGLTEN-GKV 200 (218)
T ss_dssp TTSGGG-TTCCSEE--EEEECSEEEES-----SC-CTTCEEEEEE-TT-EEEEEEETTTT-EEEESSCTTSTTSTT-HHH
T ss_pred cCChhH-hcCCCCc--EEeehhhhHhh-----hc-CCCCEEEEEc-CC-eEEEEEECCCC-EEEEEcCCCCCCChh-HHH
Confidence 663444 4443333 34578999985 23 5789999998 55 59999998888 679999999998774 789
Q ss_pred HHHHHH-HHH
Q 006689 572 LFLGLI-AAA 580 (635)
Q Consensus 572 LF~~Fv-~aa 580 (635)
+|++|+ ++|
T Consensus 201 l~~~F~~~~~ 210 (218)
T 2vpi_A 201 ILKNFLYDIA 210 (218)
T ss_dssp HHHHHHTTTT
T ss_pred HHHHHHHHHh
Confidence 999999 554
No 15
>3uow_A GMP synthetase; structural genomics consortium, SGC, purine nucleotide biosy process, ligase; HET: XMP; 2.72A {Plasmodium falciparum}
Probab=99.90 E-value=2.1e-23 Score=233.84 Aligned_cols=213 Identities=19% Similarity=0.263 Sum_probs=143.9
Q ss_pred cEEEEEeccCCCcchHHHHHHHHHHccccceeeeEEEEecCCCCCccccCCChhhhhHHHHhc--cCCCEEEECCCCCCC
Q 006689 332 VRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGGFGNR 409 (635)
Q Consensus 332 v~IalVGkY~~l~DaY~SI~~AL~~ag~~~~vkl~i~wi~s~~le~~~~~~~p~~y~~a~~~L--~~~DGIllPGGfG~r 409 (635)
.+|+|+ ||++. .-.+|.++|+.+|+.+.+. +.+ .++ +.+ .++|||||||||+++
T Consensus 8 ~~Ilil-D~Gs~--~~~~I~r~lre~Gv~~eiv----~~~-~~~----------------~~i~~~~~dgIIlsGGp~s~ 63 (556)
T 3uow_A 8 DKILVL-NFGSQ--YFHLIVKRLNNIKIFSETK----DYG-VEL----------------KDIKDMNIKGVILSGGPYSV 63 (556)
T ss_dssp CEEEEE-ESSCT--THHHHHHHHHHTTCCEEEE----ETT-CCG----------------GGTTTSCEEEEEECCCSCCT
T ss_pred CEEEEE-ECCCc--cHHHHHHHHHHCCCeEEEE----ECC-CCH----------------HHHhhcCCCEEEECCCCCcc
Confidence 589999 68743 3358999999999886542 322 111 122 378999999999887
Q ss_pred cchh----HHHHHHHHHHcCCCEEEEehhHHHHHHHHhcccccccCCCCCccCC-------CC---CCCeeeeCCCCCcC
Q 006689 410 GVQG----KILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDP-------NT---KNPCVIFMPEGSKT 475 (635)
Q Consensus 410 g~eg----~i~air~are~~iP~LGICLGmQllaie~GrnV~glkda~S~Ef~~-------~~---~~pvi~~mpe~~~~ 475 (635)
..++ ...+++.+.+.++|+||||+|||+|+.++|++|.... +.|+.. .. .+|++..|++.. +
T Consensus 64 ~~~~~~~~~~~l~~~a~~~g~PvLGIC~G~QlLa~~lGG~V~~~~---~~E~G~~~l~~~~~~~~~~~p~v~~~~~~~-~ 139 (556)
T 3uow_A 64 TEAGSPHLKKEVFEYFLEKKIPIFGICYGMQEIAVQMNGEVKKSK---TSEYGCTDVNILRNDNINNITYCRNFGDSS-S 139 (556)
T ss_dssp TSTTCCCCCHHHHHHHHHTTCCEEEETHHHHHHHHHTTCEEEEEE---EEEEEEEEEEECCTTGGGGCSGGGGC---C-C
T ss_pred cccCCcchhHHHHHHhhhcCCCEEEECHHHHHHHHHhCCcEecCC---CcccCCcceeeccCcccccccceecccccc-c
Confidence 4332 2345666777899999999999999999999986532 233321 11 245555555432 4
Q ss_pred cCCCccccCceeEEEecCCchhhhccCCceeEEEEeeeeeeeChhhhhhhcCCCeEEEEEeCCCCeEEEEEeCCCCcEEE
Q 006689 476 HMGGTMRLGSRRTYFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIG 555 (635)
Q Consensus 476 h~GgtmrLG~~~v~l~~~~sll~~iyg~~~~I~erHrHrYeVnp~~v~~Le~~Gl~~sa~s~dg~~vE~iE~~~~p~fvG 555 (635)
||||. ...+.+...++++..++++. ...++.|+|.|. .+ +.|++++|+++++. +++++.+++++ +|
T Consensus 140 ~mg~~----~n~~~~~~~~~Lf~gl~~~~--~~v~~~H~d~V~-----~l-p~g~~vlA~s~~~~-i~ai~~~~~~i-~G 205 (556)
T 3uow_A 140 AMDLY----SNYKLMNETCCLFENIKSDI--TTVWMNHNDEVT-----KI-PENFYLVSSSENCL-ICSIYNKEYNI-YG 205 (556)
T ss_dssp HHHHH----TTSCCCC--CGGGTTCCSSE--EEEEEEEEEEEE-----EC-CTTCEEEEEETTEE-EEEEEETTTTE-EE
T ss_pred ccccc----cccccccccchhhcccccCc--eEEEEEccceee-----cc-CCCcEEEEEeCCCC-EEEEEECCCCE-EE
Confidence 55542 11222223336777774333 345677888773 23 67999999999885 99999988884 69
Q ss_pred EcccCCCcCCCCCchHHHHHHHHHHhcchhhh
Q 006689 556 VQFHPEYKSRPGKPSPLFLGLIAAACGQLDTL 587 (635)
Q Consensus 556 VQFHPE~ss~p~~p~pLF~~Fv~aa~~~~~~~ 587 (635)
+|||||+++.| .+.++|++|+..++++...|
T Consensus 206 vQFHPE~~~~~-~G~~ll~nFl~~i~g~~~~~ 236 (556)
T 3uow_A 206 VQYHPEVYESL-DGELMFYNFAYNICKCKKQF 236 (556)
T ss_dssp ESSCTTSTTST-THHHHHHHHHTTTTCCCC-C
T ss_pred EEcCCCCCccc-cchHHHHHHHHHhhcccccc
Confidence 99999999888 58999999997776654444
No 16
>1l9x_A Gamma-glutamyl hydrolase; 1.60A {Homo sapiens} SCOP: c.23.16.1
Probab=99.89 E-value=1.3e-23 Score=220.27 Aligned_cols=206 Identities=16% Similarity=0.152 Sum_probs=128.8
Q ss_pred ccEEEEEeccCCCc--------chHHHHHHHHHHccccceeeeEEEEecCCCCCccccCCChhhhhHHHHhccCCCEEEE
Q 006689 331 PVRIAMVGKYTGLS--------DAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILV 402 (635)
Q Consensus 331 ~v~IalVGkY~~l~--------DaY~SI~~AL~~ag~~~~vkl~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIll 402 (635)
.+.|+|........ -...|+.++|+.+|+.+.+ .+.+. + + ....+.+.++|||||
T Consensus 30 ~P~IGI~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~v----v~~~~-~---------~---~~i~~~l~~~dglil 92 (315)
T 1l9x_A 30 KPIIGILMQKCRNKVMKNYGRYYIAASYVKYLESAGARVVP----VRLDL-T---------E---KDYEILFKSINGILF 92 (315)
T ss_dssp CCEEEEECEECCSHHHHTTCSEEEEHHHHHHHHHTTCEEEE----ECSSC-C---------H---HHHHHHHHHSSEEEE
T ss_pred CCEEEEECCcccccccccCcceehHHHHHHHHHHCCCEEEE----EecCC-C---------H---HHHHHHHhcCCEEEE
Confidence 46899996543211 1224789999999977544 23221 1 1 112234678999999
Q ss_pred CCCCCCCcch----hHHHHHHHHHHc-----CCCEEEEehhHHHHHHHHhcccccccCCCCCccCCCCCCCeeeeCCCCC
Q 006689 403 PGGFGNRGVQ----GKILAAKYAREH-----RIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGS 473 (635)
Q Consensus 403 PGGfG~rg~e----g~i~air~are~-----~iP~LGICLGmQllaie~GrnV~glkda~S~Ef~~~~~~pvi~~mpe~~ 473 (635)
|||+++.... ....+++.+++. ++|+||||+|||+|+.++|+++.... +
T Consensus 93 ~GG~~~v~p~~~~~~~~~l~~~~~~~~~~g~~~PiLGIC~G~Qll~~a~GG~~~~~~------~---------------- 150 (315)
T 1l9x_A 93 PGGSVDLRRSDYAKVAKIFYNLSIQSFDDGDYFPVWGTCLGFEELSLLISGECLLTA------T---------------- 150 (315)
T ss_dssp CCCCCCTTTCHHHHHHHHHHHHHHHHHHTTCCCCEEEETHHHHHHHHHHHSSCCCEE------E----------------
T ss_pred eCCCcccChhhhhHHHHHHHHHHHHHHhcCCCceEEEEChHHHHHHHHhCCcccccc------c----------------
Confidence 9999874211 112345555554 69999999999999999999864211 1
Q ss_pred cCcCCCccccCceeEEEe---cCCchhhhccCCc-------eeEEEEeeeeeeeChhhhhh--hcCCCeEEEEEeCCCCe
Q 006689 474 KTHMGGTMRLGSRRTYFQ---IKDCKSAKLYGNR-------TFIDERHRHRYEVNPDMIAR--LENAGLSFTGKDETSQR 541 (635)
Q Consensus 474 ~~h~GgtmrLG~~~v~l~---~~~sll~~iyg~~-------~~I~erHrHrYeVnp~~v~~--Le~~Gl~~sa~s~dg~~ 541 (635)
+..|. ..|+... ++ +.+.+.+++. ..+.. ++|+|+|++++++. ..+.|++++|+++||.
T Consensus 151 -~~~g~-----~~p~~~~~~~~~-s~L~~~~~~~~~~~l~~~~~~~-~~H~~~V~~~~~~~~~~l~~g~~v~A~s~dg~- 221 (315)
T 1l9x_A 151 -DTVDV-----AMPLNFTGGQLH-SRMFQNFPTELLLSLAVEPLTA-NFHKWSLSVKNFTMNEKLKKFFNVLTTNTDGK- 221 (315)
T ss_dssp -EEEEE-----EECCEECSTTTT-CSTTTTSCHHHHHHHHHSCCEE-EEEEEECBHHHHHTCHHHHHHEEEEEEEESSS-
T ss_pred -cccCC-----CCCeeeccCCCC-ChHHHhcChhhhhhccccceEE-EhhhhhcCccccccccccCCCCEEEEEcCCCC-
Confidence 00111 1233322 23 3333333211 12333 48999999876654 2257899999999986
Q ss_pred EEEE---EeCCCCcEEEEcccCCCcC---C-----CC------CchHHHHHHHHHHhcchh
Q 006689 542 MEIV---ELPNHPYFIGVQFHPEYKS---R-----PG------KPSPLFLGLIAAACGQLD 585 (635)
Q Consensus 542 vE~i---E~~~~p~fvGVQFHPE~ss---~-----p~------~p~pLF~~Fv~aa~~~~~ 585 (635)
+|++ +++++| ++|||||||+++ + |+ +..+||++|+++|.+...
T Consensus 222 ve~i~~i~~~~~~-i~GVQfHPE~~~~e~~~~~~~p~s~~a~~~~~~lf~~Fv~~a~~~~~ 281 (315)
T 1l9x_A 222 IEFISTMEGYKYP-VYGVQWHPEKAPYEWKNLDGISHAPNAVKTAFYLAEFFVNEARKNNH 281 (315)
T ss_dssp CEEEEEEEESSSC-EEEESSCTTHHHHCCSSCTTCCCCHHHHHHHHHHHHHHHHHHTTSCC
T ss_pred EEEEEEeccCCCC-EEEEEeCCCCCcccccccccCCccHHHHHHHHHHHHHHHHHHHhccC
Confidence 6666 555566 679999999965 2 33 235999999999976543
No 17
>1i1q_B Anthranilate synthase component II; tryptophan biosynthesis, lyase; HET: TRP; 1.90A {Salmonella typhimurium} SCOP: c.23.16.1 PDB: 1i7q_B 1i7s_B*
Probab=99.89 E-value=2.5e-22 Score=195.04 Aligned_cols=188 Identities=18% Similarity=0.164 Sum_probs=119.7
Q ss_pred cEEEEEeccCCCcchHHHHHHHHHHccccceeeeEEEEecCCCCCccccCCChhhhhHHHHhcc--CCCEEEECCCCCCC
Q 006689 332 VRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLK--GADGILVPGGFGNR 409 (635)
Q Consensus 332 v~IalVGkY~~l~DaY~SI~~AL~~ag~~~~vkl~i~wi~s~~le~~~~~~~p~~y~~a~~~L~--~~DGIllPGGfG~r 409 (635)
++|+||+.|+++ -.++.++|+.+|+++.+ .+.+. +++ +..+.+. +.|++|++||+|++
T Consensus 1 ~~i~iiDn~~s~---~~~i~~~l~~~G~~~~v----~~~~~-~~~------------~i~~~l~~~~~~~iil~gGpg~~ 60 (192)
T 1i1q_B 1 ADILLLDNIDSF---TWNLADQLRTNGHNVVI----YRNHI-PAQ------------TLIDRLATMKNPVLMLSPGPGVP 60 (192)
T ss_dssp CEEEEEECSCSS---HHHHHHHHHHTTCEEEE----EETTS-CSH------------HHHHHHTTCSSEEEEECCCSSCG
T ss_pred CcEEEEECCccH---HHHHHHHHHHCCCeEEE----EECCC-CHH------------HHHHHhhhccCCeEEECCCCcCc
Confidence 379999766644 25779999999977554 22221 110 1112222 34579999999997
Q ss_pred cchhHHHHHHHHHHcCCCEEEEehhHHHHHHHHhcccccccCCCCCccCCCCCCCeeeeCCCCCcCcCCCccccCceeEE
Q 006689 410 GVQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRTY 489 (635)
Q Consensus 410 g~eg~i~air~are~~iP~LGICLGmQllaie~GrnV~glkda~S~Ef~~~~~~pvi~~mpe~~~~h~GgtmrLG~~~v~ 489 (635)
...+....+..+.+.++|+||||+|||+|+.++|+++..... ...|. ....
T Consensus 61 ~~~~~~~~l~~~~~~~~PilGIC~G~Qll~~~~Gg~v~~~~~-----------------------~~~g~------~~~~ 111 (192)
T 1i1q_B 61 SEAGCMPELLTRLRGKLPIIGICLGHQAIVEAYGGYVGQAGE-----------------------ILHGK------ATSI 111 (192)
T ss_dssp GGSTTHHHHHHHHBTTBCEEEETHHHHHHHHHTSCCCCC--------------------------CCSSE------EEEE
T ss_pred hhCchHHHHHHHHhcCCCEEEECcChHHHHHHhCCEEEeCCC-----------------------cEecc------eeEE
Confidence 654444444444567899999999999999999987743210 01121 1111
Q ss_pred EecCCchhhhccCCceeEEEEeeeeeeeChhhhhhhcCCCeEEEEEeCCCCeEEEEEeCCCCcEEEEcccCCCcCCCCCc
Q 006689 490 FQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKP 569 (635)
Q Consensus 490 l~~~~sll~~iyg~~~~I~erHrHrYeVnp~~v~~Le~~Gl~~sa~s~dg~~vE~iE~~~~p~fvGVQFHPE~ss~p~~p 569 (635)
...+++++..+. +. ...++.|+|.+. .+ +.+++++|.+ |+. ++++++++.+ ++|+|||||++..+ .+
T Consensus 112 ~~~~~~l~~~~~-~~--~~v~~~H~~~v~-----~l-p~~~~v~a~~-~~~-~~ai~~~~~~-~~gvQfHPE~~~~~-~g 178 (192)
T 1i1q_B 112 EHDGQAMFAGLA-NP--LPVARYHSLVGS-----NV-PAGLTINAHF-NGM-VMAVRHDADR-VCGFQFHPESILTT-QG 178 (192)
T ss_dssp EECCCGGGTTSC-SS--EEEEECCC---C-----CC-CTTCEEEEEE-TTE-EEEEEETTTT-EEEESSBTTSTTCT-TH
T ss_pred ecCCChHHhcCC-CC--cEEEechhhHhh-----hC-CCccEEEECC-CCc-EEEEEECCCC-EEEEEccCcccCCc-cc
Confidence 122325555543 23 344567888764 23 6788998854 454 9999998887 57999999998776 47
Q ss_pred hHHHHHHHHHHh
Q 006689 570 SPLFLGLIAAAC 581 (635)
Q Consensus 570 ~pLF~~Fv~aa~ 581 (635)
..+|++|++++.
T Consensus 179 ~~il~nf~~~~~ 190 (192)
T 1i1q_B 179 ARLLEQTLAWAQ 190 (192)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHh
Confidence 899999998754
No 18
>3tqi_A GMP synthase [glutamine-hydrolyzing]; ligase; 2.84A {Coxiella burnetii}
Probab=99.89 E-value=2.9e-23 Score=231.41 Aligned_cols=194 Identities=19% Similarity=0.286 Sum_probs=133.2
Q ss_pred cEEEEEeccCCCcchH-HHHHHHHHHccccceeeeEEEE-ecCCCCCccccCCChhhhhHHHHhccCCCEEEECCCCCCC
Q 006689 332 VRIAMVGKYTGLSDAY-LSILKALLHASVDLRKKLVIDW-IPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNR 409 (635)
Q Consensus 332 v~IalVGkY~~l~DaY-~SI~~AL~~ag~~~~vkl~i~w-i~s~~le~~~~~~~p~~y~~a~~~L~~~DGIllPGGfG~r 409 (635)
.+|+|+ ||++ .| .++.++|+.+|+.+.+. .| .+.+++. -.++|||||||||++.
T Consensus 11 ~~I~Il-D~g~---~~~~~i~r~lr~~Gv~~~i~---p~~~~~~~i~-----------------~~~~dgIILsGGp~sv 66 (527)
T 3tqi_A 11 HRILIL-DFGS---QYAQLIARRVREIGVYCELM---PCDIDEETIR-----------------DFNPHGIILSGGPETV 66 (527)
T ss_dssp SEEEEE-ECSC---TTHHHHHHHHHHHTCEEEEE---ETTCCSSSST-----------------TTCCSEEEECCCCC--
T ss_pred CeEEEE-ECCC---ccHHHHHHHHHHCCCeEEEE---ECCCCHHHHH-----------------hcCCCEEEECCcCccc
Confidence 489999 6874 34 58899999999886652 12 1111110 1267999999999987
Q ss_pred cchhHHHHHHHHHHcCCCEEEEehhHHHHHHHHhcccccccCCCCCccCCCCCCCeeeeCCCCCcCcCCCccccCceeEE
Q 006689 410 GVQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRTY 489 (635)
Q Consensus 410 g~eg~i~air~are~~iP~LGICLGmQllaie~GrnV~glkda~S~Ef~~~~~~pvi~~mpe~~~~h~GgtmrLG~~~v~ 489 (635)
..++...+.+.+.+.++|+||||+|||+|+.++|++|...+ . .+ +|.+.+.
T Consensus 67 ~~~~~~~~~~~~~~~~~PvLGIC~G~Qlla~~lGG~V~~~~---~--------------------~e------~G~~~v~ 117 (527)
T 3tqi_A 67 TLSHTLRAPAFIFEIGCPVLGICYGMQTMAYQLGGKVNRTA---K--------------------AE------FGHAQLR 117 (527)
T ss_dssp -------CCCSTTTSSSCEEEETHHHHHHHHHSSSCBC----------------------------C------EEEEEEE
T ss_pred ccCCChhhHHHHHhcCCCEEEEChHHHHHHHHcCCeEEeCC---C--------------------cc------ccceEEE
Confidence 65565666677778899999999999999999999985421 0 12 2345666
Q ss_pred EecCCchhhhccCC-----ceeEEEEeeeeeeeChhhhhhhcCCCeEEEEEeCCCCeEEEEEeCCCCcEEEEcccCCCcC
Q 006689 490 FQIKDCKSAKLYGN-----RTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKS 564 (635)
Q Consensus 490 l~~~~sll~~iyg~-----~~~I~erHrHrYeVnp~~v~~Le~~Gl~~sa~s~dg~~vE~iE~~~~p~fvGVQFHPE~ss 564 (635)
+.+++.++..+... ......++.|+|.|. .+ +.|++++|+++++. +++++++++++ +|+|||||.+.
T Consensus 118 ~~~~~~l~~~l~~~~~~~~~~~~~v~~~H~d~v~-----~l-p~g~~v~A~s~~~~-i~ai~~~~~~~-~GvQFHPE~~~ 189 (527)
T 3tqi_A 118 VLNPAFLFDGIEDQVSPQGEPLLDVWMSHGDIVS-----EL-PPGFEATACTDNSP-LAAMADFKRRF-FGLQFHPEVTH 189 (527)
T ss_dssp ESSCTTTTSSCCSBCCTTSCCEEEEEEESSSCBC-----SC-CTTCEEEEEETTEE-EEEEECSSSCE-EEESBCSSSTT
T ss_pred EcCCChhhcCCccccccccccceEEEEEcccchh-----cc-CCCCEEEEEeCCCc-EEEEEcCCCCE-EEEEecccccc
Confidence 66554566666421 013445677888774 23 67999999998765 99999988885 69999999998
Q ss_pred CCCCchHHHHHHHHHHhcchhhh
Q 006689 565 RPGKPSPLFLGLIAAACGQLDTL 587 (635)
Q Consensus 565 ~p~~p~pLF~~Fv~aa~~~~~~~ 587 (635)
+| .+..+|.+|+..+++....|
T Consensus 190 t~-~G~~ll~nF~~~i~~~~~~w 211 (527)
T 3tqi_A 190 TP-QGHRILAHFVIHICQCIPNW 211 (527)
T ss_dssp ST-THHHHHHHHHHTTSCCCCCC
T ss_pred cc-ccchhhhhhhhhcccccchh
Confidence 87 47899999998776655444
No 19
>2ywj_A Glutamine amidotransferase subunit PDXT; uncharacterized conserved protein, structural genomics; 1.90A {Methanocaldococcus jannaschii}
Probab=99.88 E-value=8.2e-23 Score=196.81 Aligned_cols=183 Identities=15% Similarity=0.201 Sum_probs=115.0
Q ss_pred cEEEEEeccCCCcchHHHHHHHHHHccccceeeeEEEEecCCCCCccccCCChhhhhHHHHhccCCCEEEECCCCCCCcc
Q 006689 332 VRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRGV 411 (635)
Q Consensus 332 v~IalVGkY~~l~DaY~SI~~AL~~ag~~~~vkl~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIllPGGfG~rg~ 411 (635)
+||+|++ + .++|.++.++|+.+|+.+.+ ++.. +.+.++|||++|||++++..
T Consensus 1 m~i~vl~-~---~g~~~~~~~~l~~~G~~~~~------~~~~------------------~~~~~~dglil~GG~~~~~~ 52 (186)
T 2ywj_A 1 MIIGVLA-I---QGDVEEHEEAIKKAGYEAKK------VKRV------------------EDLEGIDALIIPGGESTAIG 52 (186)
T ss_dssp CEEEEEC-S---SSCCHHHHHHHHHTTSEEEE------ECSG------------------GGGTTCSEEEECCSCHHHHH
T ss_pred CEEEEEe-c---CcchHHHHHHHHHCCCEEEE------ECCh------------------HHhccCCEEEECCCCchhhh
Confidence 4799995 2 35889999999999976433 3210 24677899999999875421
Q ss_pred h--hHHHHHHHHHHcCCCEEEEehhHHHHHHHHhcccccccCCCCCccCCCCCCCeeeeCCCCCcCcCCCccccCceeEE
Q 006689 412 Q--GKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRTY 489 (635)
Q Consensus 412 e--g~i~air~are~~iP~LGICLGmQllaie~GrnV~glkda~S~Ef~~~~~~pvi~~mpe~~~~h~GgtmrLG~~~v~ 489 (635)
+ .....++.++++++|+||||+|||+|+.++|+++-++.- . +..+ ..+ . .|.. .+.++..
T Consensus 53 ~~~~~~~~~~~i~~~~~PilGIC~G~Qll~~~~gg~~~~lg~-----~----~~~~-~~~-----~-~~~~--~~~~~~~ 114 (186)
T 2ywj_A 53 KLMKKYGLLEKIKNSNLPILGTCAGMVLLSKGTGINQILLEL-----M----DITV-KRN-----A-YGRQ--VDSFEKE 114 (186)
T ss_dssp HHHHHTTHHHHHHTCCCCEEEETHHHHHHSSCCSSCCCCCCC-----S----SEEE-ETT-----T-TCSS--SCCEEEE
T ss_pred hhhhccCHHHHHHhcCCcEEEECHHHHHHHHHhCCCcCccCC-----C----ceeE-Eec-----c-CCCc--ccceecc
Confidence 1 011123334478999999999999999998887522110 0 0000 000 0 0110 1112111
Q ss_pred EecCCchhhhccCCceeEEEEeeeeeeeChhhhhhhcCCCeEEEEEeCCCCeEEEEEeCCCCcEEEEcccCCCcCCCCCc
Q 006689 490 FQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKP 569 (635)
Q Consensus 490 l~~~~sll~~iyg~~~~I~erHrHrYeVnp~~v~~Le~~Gl~~sa~s~dg~~vE~iE~~~~p~fvGVQFHPE~ss~p~~p 569 (635)
.++..+ ..+..++.|+|.|+ .+++.+++++|++ |+. +|+++.+ +++|+|||||+++ ++
T Consensus 115 -----~~~~~~----~~~~~~~~H~~~v~-----~l~~~~~~v~a~s-d~~-~~a~~~~---~~~gvQfHPE~~~---~g 172 (186)
T 2ywj_A 115 -----IEFKDL----GKVYGVFIRAPVVD-----KILSDDVEVIARD-GDK-IVGVKQG---KYMALSFHPELSE---DG 172 (186)
T ss_dssp -----EEETTT----EEEEEEESSCCEEE-----EECCTTCEEEEEE-TTE-EEEEEET---TEEEESSCGGGST---TH
T ss_pred -----cccccC----CcEEEEEEecceee-----ecCCCCeEEEEEE-CCE-EEEEeeC---CEEEEECCCCcCC---ch
Confidence 222222 12333456888774 2225789999998 655 9999863 5789999999876 36
Q ss_pred hHHHHHHHHHHhc
Q 006689 570 SPLFLGLIAAACG 582 (635)
Q Consensus 570 ~pLF~~Fv~aa~~ 582 (635)
.++|++|+++|.+
T Consensus 173 ~~l~~~F~~~~~~ 185 (186)
T 2ywj_A 173 YKVYKYFVENCVK 185 (186)
T ss_dssp HHHHHHHHHHHTC
T ss_pred hHHHHHHHHHHhh
Confidence 8999999998754
No 20
>3r75_A Anthranilate/para-aminobenzoate synthases compone; ammonia channel, chorismate, type 1 glutamine amidotransfera phenazine biosynthesis, lyase; HET: CYG; 2.10A {Burkholderia SP} PDB: 3r74_A* 3r76_A*
Probab=99.88 E-value=5.2e-23 Score=234.02 Aligned_cols=182 Identities=14% Similarity=0.144 Sum_probs=129.0
Q ss_pred ccEEEEEeccCCCcchHHHHHHHHHHccccceeeeEEEEecCCCCCccccCCChhhhhHHHHhccCCCEEEECCCCCCCc
Q 006689 331 PVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRG 410 (635)
Q Consensus 331 ~v~IalVGkY~~l~DaY~SI~~AL~~ag~~~~vkl~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIllPGGfG~rg 410 (635)
..+|+|++.|.+ .-.++.++|+..|+.+.+ .+.+.. ..+.++|||||+||||++.
T Consensus 446 Gk~IlviD~gds---f~~~l~~~l~~~G~~v~V----v~~d~~------------------~~~~~~DgIIlsGGPg~p~ 500 (645)
T 3r75_A 446 GCRALIVDAEDH---FTAMIAQQLSSLGLATEV----CGVHDA------------------VDLARYDVVVMGPGPGDPS 500 (645)
T ss_dssp TCEEEEEESSCT---HHHHHHHHHHHTTCEEEE----EETTCC------------------CCGGGCSEEEECCCSSCTT
T ss_pred CCEEEEEECCcc---HHHHHHHHHHHCCCEEEE----EECCCc------------------ccccCCCEEEECCCCCChh
Confidence 468999964442 235788999998876544 344321 1245789999999999986
Q ss_pred chh------HHHHHHHHHHcCCCEEEEehhHHHHHHHHhcccccccCCCCCccCCCCCCCeeeeCCCCCcCcCCCccccC
Q 006689 411 VQG------KILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLG 484 (635)
Q Consensus 411 ~eg------~i~air~are~~iP~LGICLGmQllaie~GrnV~glkda~S~Ef~~~~~~pvi~~mpe~~~~h~GgtmrLG 484 (635)
..+ .+.+++++++.++|+||||||||+|+.++|++|.+.+ .+++|+
T Consensus 501 d~~~p~i~~~~~lI~~a~~~~iPiLGIClG~QlLa~alGG~V~~~~-----------------------~~~~G~----- 552 (645)
T 3r75_A 501 DAGDPRIARLYAWLRHLIDEGKPFMAVCLSHQILNAILGIPLVRRE-----------------------VPNQGI----- 552 (645)
T ss_dssp CTTSHHHHHHHHHHHHHHHHTCCEEEETHHHHHHHHHTTCCEEEEE-----------------------EEEEEE-----
T ss_pred hhhhhhHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHhCCEEEcCC-----------------------Cccccc-----
Confidence 433 5778899999999999999999999999999986543 133444
Q ss_pred ceeEEEecCCchhhhccCCceeEEEEeeeeeeeCh--hhh-hhhcCCCeEEEEEeCCCCeEEEEEeCCCCcEEEEcccCC
Q 006689 485 SRRTYFQIKDCKSAKLYGNRTFIDERHRHRYEVNP--DMI-ARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPE 561 (635)
Q Consensus 485 ~~~v~l~~~~sll~~iyg~~~~I~erHrHrYeVnp--~~v-~~Le~~Gl~~sa~s~dg~~vE~iE~~~~p~fvGVQFHPE 561 (635)
++++.+. +++++..+| |+|.|+. +.+ ..+ +.|++++|+++++. ++++++++ ++|||||||
T Consensus 553 ~~~i~~~-~~~l~~~~~-----------~~~~v~~~h~~~~~~l-p~g~~v~A~s~dg~-i~Ai~~~~---~~GVQFHPE 615 (645)
T 3r75_A 553 QVEIDLF-GQRERVGFY-----------NTYVAQTVRDEMDVDG-VGTVAISRDPRTGE-VHALRGPT---FSSMQFHAE 615 (645)
T ss_dssp EEEEEET-TEEEEEEEE-----------EEEEEBCSCSEEEETT-TEEEEEEECTTTCB-EEEEEETT---EEEESSBTT
T ss_pred ceEEeee-cCcceecCC-----------CcEEEEEehhhccccC-CCCeEEEEEcCCCc-EEEEEcCC---EEEEEeCCe
Confidence 3444432 213333333 4444431 111 123 67899999999886 99999764 579999999
Q ss_pred CcCCCCCchHHHHHHHHHHhcc
Q 006689 562 YKSRPGKPSPLFLGLIAAACGQ 583 (635)
Q Consensus 562 ~ss~p~~p~pLF~~Fv~aa~~~ 583 (635)
+..++. ++++|++|++++...
T Consensus 616 ~~~t~~-G~~Ll~nFl~~~~~~ 636 (645)
T 3r75_A 616 SVLTVD-GPRILGEAITHAIRR 636 (645)
T ss_dssp STTCTT-HHHHHHHHHHHHTTT
T ss_pred ecCCcc-hHHHHHHHHHHHHhc
Confidence 988874 899999999988653
No 21
>1o1y_A Conserved hypothetical protein TM1158; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG; 1.70A {Thermotoga maritima} SCOP: c.23.16.1
Probab=99.88 E-value=5.5e-22 Score=199.86 Aligned_cols=189 Identities=16% Similarity=0.139 Sum_probs=129.5
Q ss_pred hcCCCCccEEEEEeccCCCcchHHHHHHHHHHccccceeeeEEEEecC-CCCCccccCCChhhhhHHHHhccCCCEEEEC
Q 006689 325 CDGLHEPVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPA-CDLEDATEKENPDAYKAAWKLLKGADGILVP 403 (635)
Q Consensus 325 ~~~~~~~v~IalVGkY~~l~DaY~SI~~AL~~ag~~~~vkl~i~wi~s-~~le~~~~~~~p~~y~~a~~~L~~~DGIllP 403 (635)
+.+-...++|.++-.+. .. +-.++.++|+..|+++.+ ...+. +.+. +.+.++||||||
T Consensus 6 ~~~~~~~~~~~~i~~~~-~~-~~~~i~~~l~~~G~~v~v----~~~~~~~~~~---------------~~l~~~Dglil~ 64 (239)
T 1o1y_A 6 IHHHHHHVRVLAIRHVE-IE-DLGMMEDIFREKNWSFDY----LDTPKGEKLE---------------RPLEEYSLVVLL 64 (239)
T ss_dssp ----CCCCEEEEECSST-TS-SCTHHHHHHHHTTCEEEE----ECGGGTCCCS---------------SCGGGCSEEEEC
T ss_pred cccccceeEEEEEECCC-CC-CchHHHHHHHhCCCcEEE----eCCcCccccc---------------cchhcCCEEEEC
Confidence 33445678999995443 22 445788899999977543 12222 1111 346789999999
Q ss_pred CCCCCCc-------chhHHHHHHHHHHcCCCEEEEehhHHHHHHHHhcccccccCCCCCccCCCCCCCeeeeCCCCCcCc
Q 006689 404 GGFGNRG-------VQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTH 476 (635)
Q Consensus 404 GGfG~rg-------~eg~i~air~are~~iP~LGICLGmQllaie~GrnV~glkda~S~Ef~~~~~~pvi~~mpe~~~~h 476 (635)
||++++- .....+.++++.++++|+||||+|||+|+.++|++|...+. + .+
T Consensus 65 GG~~~~~~~~~~~~l~~~~~~i~~~~~~~~PiLGIC~G~QlL~~alGG~v~~~~~-----------g-----------~~ 122 (239)
T 1o1y_A 65 GGYMGAYEEEKYPFLKYEFQLIEEILKKEIPFLGICLGSQMLAKVLGASVYRGKN-----------G-----------EE 122 (239)
T ss_dssp CCSCCTTCTTTCTHHHHHHHHHHHHHHHTCCEEEETHHHHHHHHHTTCCEEECTT-----------C-----------CE
T ss_pred CCCccccCCccChhHHHHHHHHHHHHHCCCCEEEEchhHHHHHHHcCCeEecCCC-----------C-----------Cc
Confidence 9986542 13578889999899999999999999999999998864320 0 12
Q ss_pred CCCccccCceeEEEecCCchhhhccCCceeEEEEeeeeeeeChhhhhhhcCCCeEEEEEeCCCCeEEEEEeCCCCcEEEE
Q 006689 477 MGGTMRLGSRRTYFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGV 556 (635)
Q Consensus 477 ~GgtmrLG~~~v~l~~~~sll~~iyg~~~~I~erHrHrYeVnp~~v~~Le~~Gl~~sa~s~dg~~vE~iE~~~~p~fvGV 556 (635)
.|.+++...+++.++..+ ++ ....+|.|+|.+. + +.+++++|+++++. +|+++..+ ++|+
T Consensus 123 ------~G~~~v~~~~~~~l~~~~-~~--~~~~~~~H~~~v~------l-p~~~~vlA~s~~~~-iea~~~~~---i~gv 182 (239)
T 1o1y_A 123 ------IGWYFVEKVSDNKFFREF-PD--RLRVFQWHGDTFD------L-PRRATRVFTSEKYE-NQGFVYGK---AVGL 182 (239)
T ss_dssp ------EEEEEEEECCCCGGGTTS-CS--EEEEEEEESEEEC------C-CTTCEEEEECSSCS-CSEEEETT---EEEE
T ss_pred ------cccEEEEECCCCchHHhC-CC--CceeEeecCCccc------c-CCCCEEEEEcCCCC-EEEEEECC---EEEE
Confidence 235666655553444433 32 2456778999872 2 67899999998886 89999874 6899
Q ss_pred cccCCCcCCCCCchHHHHHHHHHHhc
Q 006689 557 QFHPEYKSRPGKPSPLFLGLIAAACG 582 (635)
Q Consensus 557 QFHPE~ss~p~~p~pLF~~Fv~aa~~ 582 (635)
|||||++. .++.+|++....
T Consensus 183 QfHPE~~~------~~~~~~~~~~~~ 202 (239)
T 1o1y_A 183 QFHIEVGA------RTMKRWIEAYKD 202 (239)
T ss_dssp SSBSSCCH------HHHHHHHHHTHH
T ss_pred EeCccCCH------HHHHHHHHHhHH
Confidence 99999953 488888876443
No 22
>1gpm_A GMP synthetase, XMP aminase; class I glutamine amidotransferase, N-type ATP pyrophosphata transferase (glutamine amidotransferase); HET: AMP CIT; 2.20A {Escherichia coli} SCOP: c.23.16.1 c.26.2.1 d.52.2.1
Probab=99.87 E-value=8.5e-23 Score=227.48 Aligned_cols=191 Identities=17% Similarity=0.245 Sum_probs=130.6
Q ss_pred cEEEEEeccCCCcchHHHHHHHHHHccccceeeeEEEEecCCCCCccccCCChhhhhHHHHhccCCCEEEECCCCCCCcc
Q 006689 332 VRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRGV 411 (635)
Q Consensus 332 v~IalVGkY~~l~DaY~SI~~AL~~ag~~~~vkl~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIllPGGfG~rg~ 411 (635)
.+|+|+ ||++- .-.++.++|+.+|+.+.+ .+.+. + ++ +. +. .++|||||||||++...
T Consensus 8 ~~IlIl-D~g~~--~~~~i~r~lr~~G~~~~i----~p~~~-~---------~~---~i-~~-~~~dgiILsGGp~s~~~ 65 (525)
T 1gpm_A 8 HRILIL-DFGSQ--YTQLVARRVRELGVYCEL----WAWDV-T---------EA---QI-RD-FNPSGIILSGGPESTTE 65 (525)
T ss_dssp SEEEEE-ECSCT--THHHHHHHHHHTTCEEEE----EESCC-C---------HH---HH-HH-HCCSEEEECCCSSCTTS
T ss_pred CEEEEE-ECCCc--cHHHHHHHHHHCCCEEEE----EECCC-C---------HH---HH-hc-cCCCEEEECCcCccccc
Confidence 589999 68743 224788999999977654 22221 0 10 01 11 26899999999987633
Q ss_pred hhHHHHHHHHHHcCCCEEEEehhHHHHHHHHhcccccccCCCCCccCCCCCCCeeeeCCCCCcCcCCCccccCceeEEEe
Q 006689 412 QGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRTYFQ 491 (635)
Q Consensus 412 eg~i~air~are~~iP~LGICLGmQllaie~GrnV~glkda~S~Ef~~~~~~pvi~~mpe~~~~h~GgtmrLG~~~v~l~ 491 (635)
++.....+.+.+.++|+||||+|||+|+.++|++|.+.+ . .+.| .+++.+.
T Consensus 66 ~~~~~~~~~~~~~g~PvLGIC~G~Qlla~~~GG~V~~~~---~--------------------~e~G------~~~v~~~ 116 (525)
T 1gpm_A 66 ENSPRAPQYVFEAGVPVFGVCYGMQTMAMQLGGHVEASN---E--------------------REFG------YAQVEVV 116 (525)
T ss_dssp TTCCCCCGGGGTSSSCEEEETHHHHHHHHHHTCEEECCS---S--------------------CEEE------EEEEEEC
T ss_pred cCCcchHHHHHHCCCCEEEEChHHHHHHHHcCCEEEeCC---C--------------------cccc------eEEEEeC
Confidence 222222355667899999999999999999999986532 1 1223 3455555
Q ss_pred cCCchhhhccCCc------eeEEEEeeeeeeeChhhhhhhcCCCeEEEEEeCCCCeEEEEEeCCCCcEEEEcccCCCcCC
Q 006689 492 IKDCKSAKLYGNR------TFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSR 565 (635)
Q Consensus 492 ~~~sll~~iyg~~------~~I~erHrHrYeVnp~~v~~Le~~Gl~~sa~s~dg~~vE~iE~~~~p~fvGVQFHPE~ss~ 565 (635)
+++.++..+. .. .....++.|+|.|. .+ +.|++++|+++++. ++++++++++ ++|+|||||++.+
T Consensus 117 ~~~~L~~~l~-~~~~~~~~~~~~v~~~H~~~V~-----~l-p~g~~v~A~s~~~~-i~ai~~~~~~-i~gvQFHPE~~~~ 187 (525)
T 1gpm_A 117 NDSALVRGIE-DALTADGKPLLDVWMSHGDKVT-----AI-PSDFITVASTESCP-FAIMANEEKR-FYGVQFHPEVTHT 187 (525)
T ss_dssp SCCTTTTTCC-SEECTTSCEEEEEEEEECSEEE-----EC-CTTCEEEEECSSCS-CSEEEETTTT-EEEESBCTTSTTS
T ss_pred CCCHhhccCc-cccccccccceEEEEEccceee-----eC-CCCCEEEEECCCCC-EEEEEECCCC-EEEEecCCCCCcc
Confidence 5434454442 20 02334567888774 33 68999999999886 9999998887 5799999999988
Q ss_pred CCCchHHHHHHHHHHhcc
Q 006689 566 PGKPSPLFLGLIAAACGQ 583 (635)
Q Consensus 566 p~~p~pLF~~Fv~aa~~~ 583 (635)
|. +..+|.+|+..+++.
T Consensus 188 ~~-g~~ll~nF~~~i~~~ 204 (525)
T 1gpm_A 188 RQ-GMRMLERFVRDICQC 204 (525)
T ss_dssp TT-HHHHHHHHHHTTSCC
T ss_pred hh-HHHHHHHHHHhhhhc
Confidence 75 899999999765543
No 23
>3d54_D Phosphoribosylformylglycinamidine synthase 1; alpha-beta structure, ATP-binding, cytoplasm, ligase, nucleotide-binding, purine biosynthesis; HET: CYG ADP; 3.50A {Thermotoga maritima}
Probab=99.86 E-value=4.6e-21 Score=187.36 Aligned_cols=186 Identities=18% Similarity=0.161 Sum_probs=124.8
Q ss_pred cEEEEEeccCCCcchHHHHHHHHHHccccceeeeEEEEecCCCCCccccCCChhhhhHHHHhccCCCEEEECCCCCCCc-
Q 006689 332 VRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRG- 410 (635)
Q Consensus 332 v~IalVGkY~~l~DaY~SI~~AL~~ag~~~~vkl~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIllPGGfG~rg- 410 (635)
++|+|+ +|.... ...++.++|+.+|+.+.+ +... +.+.++||||||||++...
T Consensus 3 ~~i~il-~~~~~~-~~~~~~~~l~~~g~~~~~------~~~~------------------~~~~~~d~lil~Gg~~~~~~ 56 (213)
T 3d54_D 3 PRACVV-VYPGSN-CDRDAYHALEINGFEPSY------VGLD------------------DKLDDYELIILPGGFSYGDY 56 (213)
T ss_dssp CEEEEE-CCTTEE-EHHHHHHHHHTTTCEEEE------ECTT------------------CCCSSCSEEEECEECGGGGC
T ss_pred cEEEEE-EcCCCC-ccHHHHHHHHHCCCEEEE------EecC------------------CCcccCCEEEECCCCchhhh
Confidence 589999 576442 235789999999876543 2211 1256789999999965321
Q ss_pred --------chhHHHHHHHHHHcCCCEEEEehhHHHHHHH--HhcccccccCCCCCccCCCCCCCeeeeCCCCCcCcCCCc
Q 006689 411 --------VQGKILAAKYAREHRIPYLGICLGMQVAVIE--FARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGT 480 (635)
Q Consensus 411 --------~eg~i~air~are~~iP~LGICLGmQllaie--~GrnV~glkda~S~Ef~~~~~~pvi~~mpe~~~~h~Ggt 480 (635)
....++.++.+.++++|+||||+|||+|+.+ +++++...+ .. ..|.|
T Consensus 57 ~~~~~~~~~~~~~~~l~~~~~~~~pilgIC~G~qlLa~aGll~g~v~~~~--------------------~~-~~~~g-- 113 (213)
T 3d54_D 57 LRPGAVAAREKIAFEIAKAAERGKLIMGICNGFQILIEMGLLKGALLQNS--------------------SG-KFICK-- 113 (213)
T ss_dssp SSTTHHHHTSTTHHHHHHHHHHTCEEEECHHHHHHHHHHTSSCSEEECCS--------------------SS-SCBCC--
T ss_pred hccccccccHHHHHHHHHHHHCCCEEEEECHHHHHHHHcCCCCCCeecCC--------------------CC-ceEee--
Confidence 1346788888888899999999999999987 555442210 00 01333
Q ss_pred cccCceeEEEe-cCCchhhhccCCceeEEEEeee---eeeeChhhhhhhcCCCeEEEEEeCC--C--CeEEEEEeCCCCc
Q 006689 481 MRLGSRRTYFQ-IKDCKSAKLYGNRTFIDERHRH---RYEVNPDMIARLENAGLSFTGKDET--S--QRMEIVELPNHPY 552 (635)
Q Consensus 481 mrLG~~~v~l~-~~~sll~~iyg~~~~I~erHrH---rYeVnp~~v~~Le~~Gl~~sa~s~d--g--~~vE~iE~~~~p~ 552 (635)
.+++.+. +++.++.. .++...+.....| +|.+.+ .++.++|++++ | ..+|+++.++.+
T Consensus 114 ----~~~v~~~~~~~~l~~~-~~~~~~~~~~~~H~~~s~~~~~--------~~~~~~a~~~~~ng~~~~i~a~~~~~~~- 179 (213)
T 3d54_D 114 ----WVDLIVENNDTPFTNA-FEKGEKIRIPIAHGFGRYVKID--------DVNVVLRYVKDVNGSDERIAGVLNESGN- 179 (213)
T ss_dssp ----EEEEEECCCSSTTSTT-SCTTCEEEEECCBSSCEEECSS--------CCEEEEEESSCSSCCGGGEEEEECSSSC-
T ss_pred ----eEEEEeCCCCCceeec-cCCCCEEEEEeecCceEEEecC--------CCcEEEEEcCCCCCCccceeEEEcCCCC-
Confidence 4566665 34334433 3322234443345 888753 47888999866 6 459999987665
Q ss_pred EEEEcccCCCcCC----CCCchHHHHHHHHHH
Q 006689 553 FIGVQFHPEYKSR----PGKPSPLFLGLIAAA 580 (635)
Q Consensus 553 fvGVQFHPE~ss~----p~~p~pLF~~Fv~aa 580 (635)
++|+|||||++.. +.+...+|++|++++
T Consensus 180 ~~gvQfHPE~~~~~~~~~~~g~~l~~~f~~~~ 211 (213)
T 3d54_D 180 VFGLMPHPERAVEELIGGEDGKKVFQSILNYL 211 (213)
T ss_dssp EEEECSCSTTTTSTTTTCSTTSHHHHHHHHHC
T ss_pred EEEEeCCHHHhcCHhhhcCccHHHHHHHHHHh
Confidence 6899999999984 245789999999875
No 24
>2ywb_A GMP synthase [glutamine-hydrolyzing]; GMP synthetase, XMP binding, ATP binding, purine nucleotide biosynthetic pathway, structural genomics; 2.10A {Thermus thermophilus} PDB: 2ywc_A*
Probab=99.86 E-value=2.7e-22 Score=222.28 Aligned_cols=180 Identities=18% Similarity=0.178 Sum_probs=126.1
Q ss_pred EEEEeccCCCcchH-HHHHHHHHHccccceeeeEEEEecCCCCCccccCCChhhhhHHHHhcc--CCCEEEECCCCCCCc
Q 006689 334 IAMVGKYTGLSDAY-LSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLK--GADGILVPGGFGNRG 410 (635)
Q Consensus 334 IalVGkY~~l~DaY-~SI~~AL~~ag~~~~vkl~i~wi~s~~le~~~~~~~p~~y~~a~~~L~--~~DGIllPGGfG~rg 410 (635)
|+|+ ||++ .| .++.++|+.+|+.+.+ .+.+. + + +.+. ++|||||||||++.-
T Consensus 2 i~il-D~g~---~~~~~i~r~l~~~G~~~~i----~p~~~-~---------~-------~~i~~~~~dgiIlsGGp~s~~ 56 (503)
T 2ywb_A 2 VLVL-DFGS---QYTRLIARRLRELRAFSLI----LPGDA-P---------L-------EEVLKHRPQALILSGGPRSVF 56 (503)
T ss_dssp EEEE-ESSC---TTHHHHHHHHHTTTCCEEE----EETTC-C---------H-------HHHHTTCCSEEEECCCSSCSS
T ss_pred EEEE-ECCC---cHHHHHHHHHHHCCCEEEE----EECCC-C---------H-------HHHHhcCCCEEEECCCCchhc
Confidence 8899 6874 34 5899999999987654 22221 1 1 1222 579999999998753
Q ss_pred chhHHHHHHHHHHcCCCEEEEehhHHHHHHHHhcccccccCCCCCccCCCCCCCeeeeCCCCCcCcCCCccccCceeEEE
Q 006689 411 VQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRTYF 490 (635)
Q Consensus 411 ~eg~i~air~are~~iP~LGICLGmQllaie~GrnV~glkda~S~Ef~~~~~~pvi~~mpe~~~~h~GgtmrLG~~~v~l 490 (635)
.++.....+.+.+.++|+||||+|||+|+.++|++|...+ . .+.| .+++.+
T Consensus 57 ~~~~~~~~~~~~~~~~PvLGIC~G~Qlla~~~GG~v~~~~---~--------------------~e~G------~~~v~~ 107 (503)
T 2ywb_A 57 DPDAPRPDPRLFSSGLPLLGICYGMQLLAQELGGRVERAG---R--------------------AEYG------KALLTR 107 (503)
T ss_dssp CTTCCCCCGGGGCSSCCEEEETHHHHHHHHTTTCEEECC--------------------------CEE------EEECSE
T ss_pred cCCCcchHHHHHhCCCCEEEECHHHHHHHHHhCCeEeeCC---C--------------------Cccc------eEEEEe
Confidence 3221222355567899999999999999999999986432 1 1223 234444
Q ss_pred ecCCchhhhccCCceeEEEEeeeeeeeChhhhhhhcCCCeEEEEEeCCCCeEEEEEeCCCCcEEEEcccCCCcCCCCCch
Q 006689 491 QIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPS 570 (635)
Q Consensus 491 ~~~~sll~~iyg~~~~I~erHrHrYeVnp~~v~~Le~~Gl~~sa~s~dg~~vE~iE~~~~p~fvGVQFHPE~ss~p~~p~ 570 (635)
.+ +.++..+. +...+ ++.|+|.|. .+ +.|++++|+++++. ++++++++++ ++|+|||||.+.+|. +.
T Consensus 108 ~~-~~l~~~~~-~~~~v--~~~H~~~v~-----~l-p~g~~v~A~s~~~~-i~ai~~~~~~-~~gvQFHPE~~~~~~-g~ 174 (503)
T 2ywb_A 108 HE-GPLFRGLE-GEVQV--WMSHQDAVT-----AP-PPGWRVVAETEENP-VAAIASPDGR-AYGVQFHPEVAHTPK-GM 174 (503)
T ss_dssp EC-SGGGTTCC-SCCEE--EEECSCEEE-----EC-CTTCEEEEECSSCS-CSEEECTTSS-EEEESBCTTSTTSTT-HH
T ss_pred cC-cHHhhcCC-CccEE--EEECCCccc-----cC-CCCCEEEEEECCCC-EEEEEeCCCC-EEEEecCCCcccccc-cH
Confidence 34 35555543 33334 567888874 23 68999999999876 9999998887 579999999998874 89
Q ss_pred HHHHHHHHHH
Q 006689 571 PLFLGLIAAA 580 (635)
Q Consensus 571 pLF~~Fv~aa 580 (635)
.+|.+|++.|
T Consensus 175 ~ll~~F~~~~ 184 (503)
T 2ywb_A 175 QILENFLELA 184 (503)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHh
Confidence 9999999654
No 25
>1gpw_B Amidotransferase HISH; lyase/transferase, complex (lyase/transferase), histidine biosynthesis, glutaminase, glutamine amidotransferase; 2.4A {Thermotoga maritima} SCOP: c.23.16.1 PDB: 1k9v_F 1kxj_A 2wjz_B
Probab=99.85 E-value=7.2e-22 Score=192.42 Aligned_cols=184 Identities=20% Similarity=0.246 Sum_probs=117.8
Q ss_pred cEEEEEeccCCCcchHHHHHHHHHHcc-----ccceeeeEEEEecCCCCCccccCCChhhhhHHHHhccCCCEEEECCCC
Q 006689 332 VRIAMVGKYTGLSDAYLSILKALLHAS-----VDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGF 406 (635)
Q Consensus 332 v~IalVGkY~~l~DaY~SI~~AL~~ag-----~~~~vkl~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIllPGGf 406 (635)
++|+|+ +|+.. ++.|+.++|+.+| +++.+ ++.. +. .++||||||||
T Consensus 1 m~I~ii-d~~~g--~~~s~~~~l~~~G~~~~~~~~~~------~~~~------------------~~-~~~dglilpG~- 51 (201)
T 1gpw_B 1 MRIGII-SVGPG--NIMNLYRGVKRASENFEDVSIEL------VESP------------------RN-DLYDLLFIPGV- 51 (201)
T ss_dssp CEEEEE-CCSSS--CCHHHHHHHHHHSTTBSSCEEEE------ECSC------------------CS-SCCSEEEECCC-
T ss_pred CEEEEE-ecCCc--hHHHHHHHHHHcCCCCCceEEEE------ECCC------------------cc-cCCCEEEECCC-
Confidence 489999 68743 6789999999998 55433 2211 12 57899999884
Q ss_pred CCCcch-------hHHHHHHHHHHcCCCEEEEehhHHHHHHHHh--cccccccCCCCCccCCCCCCCeeeeCCCCCcCcC
Q 006689 407 GNRGVQ-------GKILAAKYAREHRIPYLGICLGMQVAVIEFA--RSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHM 477 (635)
Q Consensus 407 G~rg~e-------g~i~air~are~~iP~LGICLGmQllaie~G--rnV~glkda~S~Ef~~~~~~pvi~~mpe~~~~h~ 477 (635)
|+++.. +.++.++.+.+.++|+||||+|||+|+.+++ ++.-++. . ....+ ..++....+|+
T Consensus 52 g~~~~~~~~l~~~~~~~~i~~~~~~~~PilGIC~G~Qll~~~~g~~G~~~~l~------~---~~g~v-~~~~~~~~~~~ 121 (201)
T 1gpw_B 52 GHFGEGMRRLRENDLIDFVRKHVEDERYVVGVCLGMQLLFEESEEAPGVKGLS------L---IEGNV-VKLRSRRLPHM 121 (201)
T ss_dssp SCSHHHHHHHHHTTCHHHHHHHHHTTCEEEEETHHHHTTSSEETTEEEEECCC------S---SSEEE-EECCCSSCSEE
T ss_pred CcHHHHHHHHHhhCHHHHHHHHHHcCCeEEEEChhHHHHHHhhccCCCCCCcc------e---eeeEE-EEcCCCCCCcc
Confidence 665421 3567888888899999999999999998876 3321111 0 01111 11111112344
Q ss_pred CCccccCceeEEEecCCchhhhccCCceeEEEEeeeeeeeChhhhhhhcCCCeEEEEEeCC-CCeEEEEEeCCCCcEEEE
Q 006689 478 GGTMRLGSRRTYFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDET-SQRMEIVELPNHPYFIGV 556 (635)
Q Consensus 478 GgtmrLG~~~v~l~~~~sll~~iyg~~~~I~erHrHrYeVnp~~v~~Le~~Gl~~sa~s~d-g~~vE~iE~~~~p~fvGV 556 (635)
|| +++..... + .. ....+.|+|.|.+. +++++|++++ |..+++++.++ + ++|+
T Consensus 122 g~------~~l~~~~~-~-------~~--~~v~~~H~~~v~~~--------~~~vla~s~~~g~~~~a~~~~~-~-i~gv 175 (201)
T 1gpw_B 122 GW------NEVIFKDT-F-------PN--GYYYFVHTYRAVCE--------EEHVLGTTEYDGEIFPSAVRKG-R-ILGF 175 (201)
T ss_dssp EE------EEEEESSS-S-------CC--EEEEEEESEEEEEC--------GGGEEEEEEETTEEEEEEEEET-T-EEEE
T ss_pred cc------eeeEeccC-C-------CC--CeEEEECcceeccC--------CCEEEEEEccCCceEEEEEECC-C-EEEE
Confidence 43 33333221 1 12 23345688887532 4568888876 64589999875 5 6899
Q ss_pred cccCCCcCCCCCchHHHHHHHHHHhc
Q 006689 557 QFHPEYKSRPGKPSPLFLGLIAAACG 582 (635)
Q Consensus 557 QFHPE~ss~p~~p~pLF~~Fv~aa~~ 582 (635)
|||||++ +.....+|++|++++..
T Consensus 176 QfHPE~~--~~~~~~l~~~f~~~~~~ 199 (201)
T 1gpw_B 176 QFHPEKS--SKIGRKLLEKVIECSLS 199 (201)
T ss_dssp SSCGGGS--HHHHHHHHHHHHHHSSC
T ss_pred ECCCccc--CHhHHHHHHHHHHHhhc
Confidence 9999998 33466899999988754
No 26
>3l7n_A Putative uncharacterized protein; glutamine amidotransferase, transferas; 2.70A {Streptococcus mutans}
Probab=99.84 E-value=3.3e-20 Score=186.09 Aligned_cols=184 Identities=17% Similarity=0.169 Sum_probs=127.3
Q ss_pred cEEEEEeccCCCcchHHHHHHHHHHccccceeeeEEEEecCCCCCccccCCChhhhhHHHHhccCCCEEEECCCCCCCc-
Q 006689 332 VRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRG- 410 (635)
Q Consensus 332 v~IalVGkY~~l~DaY~SI~~AL~~ag~~~~vkl~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIllPGGfG~rg- 410 (635)
+||+++ ..... +....+.+.|+..|+++.+ ..+...+..+ +.+.++||||||||++++.
T Consensus 1 m~i~vi-~h~~~-e~~g~~~~~l~~~g~~~~~----~~~~~~~~~p--------------~~~~~~d~lii~GGp~~~~~ 60 (236)
T 3l7n_A 1 MRIHFI-LHETF-EAPGAYLAWAALRGHDVSM----TKVYRYEKLP--------------KDIDDFDMLILMGGPQSPSS 60 (236)
T ss_dssp CEEEEE-ECCTT-SCCHHHHHHHHHTTCEEEE----EEGGGTCCCC--------------SCGGGCSEEEECCCSSCTTC
T ss_pred CeEEEE-eCCCC-CCchHHHHHHHHCCCeEEE----EeeeCCCCCC--------------CCccccCEEEECCCCCCccc
Confidence 478888 34433 2566778888888877654 2333222101 2356899999999999842
Q ss_pred -------c--hhHHHHHHHHHHcCCCEEEEehhHHHHHHHHhcccccccCCCCCccCCCCCCCeeeeCCCCCcCcCCCcc
Q 006689 411 -------V--QGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTM 481 (635)
Q Consensus 411 -------~--eg~i~air~are~~iP~LGICLGmQllaie~GrnV~glkda~S~Ef~~~~~~pvi~~mpe~~~~h~Ggtm 481 (635)
. ....++++.+.+.++|+||||+|||+|+.++|++|...+ .+++|
T Consensus 61 ~~~~~~~~~~~~~~~~i~~~~~~~~PvLGIClG~QlL~~~~Gg~v~~~~-----------------------~~~~G--- 114 (236)
T 3l7n_A 61 TKKEFPYYDAQAEVKLIQKAAKSEKIIVGVCLGAQLMGVAYGADYLHSP-----------------------KKEIG--- 114 (236)
T ss_dssp CTTTCTTCCHHHHHHHHHHHHHTTCEEEEETHHHHHHHHHTTCCCEEEE-----------------------EEEEE---
T ss_pred ccccCcccchHHHHHHHHHHHHcCCCEEEEchHHHHHHHHhCCEEecCC-----------------------Cceee---
Confidence 1 236888999999999999999999999999999875422 02333
Q ss_pred ccCceeEEEecC---CchhhhccCCceeEEEEeeeeeeeChhhhhhhcCCCeEEEEEeCCCCeEEEEEeCCCCcEEEEcc
Q 006689 482 RLGSRRTYFQIK---DCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQF 558 (635)
Q Consensus 482 rLG~~~v~l~~~---~sll~~iyg~~~~I~erHrHrYeVnp~~v~~Le~~Gl~~sa~s~dg~~vE~iE~~~~p~fvGVQF 558 (635)
.+++.+.+. +.++..+. .. ....|.|++.. .+ +.+++++|.++++. +++++..+ + ++|+||
T Consensus 115 ---~~~v~~~~~~~~~~l~~~~~-~~--~~v~~~H~~~~------~l-p~~~~vla~s~~~~-~~a~~~~~-~-v~gvQf 178 (236)
T 3l7n_A 115 ---NYLISLTEAGKMDSYLSDFS-DD--LLVGHWHGDMP------GL-PDKAQVLAISQGCP-RQIIKFGP-K-QYAFQC 178 (236)
T ss_dssp ---EEEEEECTTGGGCGGGTTSC-SE--EEEEEEEEEEC------CC-CTTCEEEEECSSCS-CSEEEEET-T-EEEESS
T ss_pred ---eEEEEEccCcccChHHhcCC-CC--cEEEEecCCcc------cC-CChheEEEECCCCC-EEEEEECC-C-EEEEEe
Confidence 466776552 24454443 23 33456677642 22 67899999998886 88999865 3 789999
Q ss_pred cCCCcCCCCCchHHHHHHHHHHhcc
Q 006689 559 HPEYKSRPGKPSPLFLGLIAAACGQ 583 (635)
Q Consensus 559 HPE~ss~p~~p~pLF~~Fv~aa~~~ 583 (635)
|||++ ..++.+|++.....
T Consensus 179 HPE~~------~~~~~~~~~~~~~~ 197 (236)
T 3l7n_A 179 HLEFT------PELVAALIAQEDDL 197 (236)
T ss_dssp BSSCC------HHHHHHHHHHCSCH
T ss_pred CCCCC------HHHHHHHHHhhhhh
Confidence 99996 46889998876554
No 27
>3m3p_A Glutamine amido transferase; structural genomics, nysgrc, PSI-2; HET: MSE; 1.30A {Methylobacillus flagellatus} PDB: 3l83_A*
Probab=99.83 E-value=7.8e-20 Score=186.04 Aligned_cols=182 Identities=15% Similarity=0.163 Sum_probs=125.1
Q ss_pred cEEEEEeccCCCcchHHHHHHHHHHccccceeeeEEEEecCCCCCccccCCChhhhhHHHHhccCCCEEEECCCCCCCc-
Q 006689 332 VRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRG- 410 (635)
Q Consensus 332 v~IalVGkY~~l~DaY~SI~~AL~~ag~~~~vkl~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIllPGGfG~rg- 410 (635)
.+|+++- ..... ...++.++|+..|+++.+. .+...+.. | +.+.++||||||||++++.
T Consensus 4 ~~vliiq-h~~~e-~~~~i~~~l~~~G~~v~v~----~~~~~~~~-------p-------~~~~~~d~lIl~GGp~~~~d 63 (250)
T 3m3p_A 4 KPVMIIQ-FSASE-GPGHFGDFLAGEHIPFQVL----RMDRSDPL-------P-------AEIRDCSGLAMMGGPMSAND 63 (250)
T ss_dssp CCEEEEE-SSSSC-CCHHHHHHHHHTTCCEEEE----EGGGTCCC-------C-------SCGGGSSEEEECCCSSCTTS
T ss_pred CeEEEEE-CCCCC-CHHHHHHHHHHCCCeEEEE----eccCCCcC-------c-------CccccCCEEEECCCCCcccc
Confidence 4688873 33332 4578889999999886552 22221110 1 2356899999999987642
Q ss_pred ----chhHHHHHHHHHHcCCCEEEEehhHHHHHHHHhcccccccCCCCCccCCCCCCCeeeeCCCCCcCcCCCccccCce
Q 006689 411 ----VQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSR 486 (635)
Q Consensus 411 ----~eg~i~air~are~~iP~LGICLGmQllaie~GrnV~glkda~S~Ef~~~~~~pvi~~mpe~~~~h~GgtmrLG~~ 486 (635)
....++.++.+.+.++|+||||+|||+|+.++|++|...+ .+++|| .
T Consensus 64 ~~~~~~~~~~~i~~~~~~~~PvlGIC~G~Qll~~~lGG~V~~~~-----------------------~~e~G~------~ 114 (250)
T 3m3p_A 64 DLPWMPTLLALIRDAVAQRVPVIGHCLGGQLLAKAMGGEVTDSP-----------------------HAEIGW------V 114 (250)
T ss_dssp CCTTHHHHHHHHHHHHHHTCCEEEETHHHHHHHHHTTCCEEEEE-----------------------EEEEEE------E
T ss_pred cchHHHHHHHHHHHHHHcCCCEEEECHHHHHHHHHhCCEEEeCC-----------------------CCceee------E
Confidence 3456788888888999999999999999999999986532 123444 5
Q ss_pred eEEEecC---CchhhhccCCceeEEEEeeeeeeeChhhhhhhcCCCeEEEEEeCCCCeEEEEEeCCCCcEEEEcccCCCc
Q 006689 487 RTYFQIK---DCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYK 563 (635)
Q Consensus 487 ~v~l~~~---~sll~~iyg~~~~I~erHrHrYeVnp~~v~~Le~~Gl~~sa~s~dg~~vE~iE~~~~p~fvGVQFHPE~s 563 (635)
++.+.+. ++++ ++. .....+|.|+|.|. + +.|++++|.++++. +++++..++ ++|+|||||++
T Consensus 115 ~v~~~~~~~~~~l~-g~~---~~~~v~~~H~~~v~------l-p~~~~vlA~s~~~~-~~a~~~~~~--~~GvQfHPE~~ 180 (250)
T 3m3p_A 115 RAWPQHVPQALEWL-GTW---DELELFEWHYQTFS------I-PPGAVHILRSEHCA-NQAYVLDDL--HIGFQCHIEMQ 180 (250)
T ss_dssp EEEECSSHHHHHHH-SCS---SCEEEEEEEEEEEC------C-CTTEEEEEEETTEE-EEEEEETTT--EEEESSCTTCC
T ss_pred EEEEecCCCCcccc-cCC---CccEEEEEccceee------c-CCCCEEEEEeCCCC-EEEEEECCe--eEEEEeCCcCC
Confidence 6666543 1333 332 23445678888872 2 67999999999875 999999874 67999999986
Q ss_pred CCCCCchHHHHHHHHHHhc
Q 006689 564 SRPGKPSPLFLGLIAAACG 582 (635)
Q Consensus 564 s~p~~p~pLF~~Fv~aa~~ 582 (635)
+ .....+++....
T Consensus 181 ~------~~~~~~l~~~~~ 193 (250)
T 3m3p_A 181 A------HMVREWCSISPE 193 (250)
T ss_dssp H------HHHHHHHHHCGG
T ss_pred H------HHHHHHHHhhHH
Confidence 3 355666655433
No 28
>2vxo_A GMP synthase [glutamine-hydrolyzing]; proto-oncogene, phosphoprotein, GMP synthetase, guanine monophosphate synthetase, chromosomal rearrangement; HET: XMP; 2.5A {Homo sapiens}
Probab=99.81 E-value=1.5e-20 Score=215.44 Aligned_cols=180 Identities=16% Similarity=0.147 Sum_probs=119.6
Q ss_pred cEEEEEeccCCCcchHH-HHHHHHHHccccceeeeEEEEecCCCCCccccCCChhhhhHHHHhc--cCCCEEEECCCCCC
Q 006689 332 VRIAMVGKYTGLSDAYL-SILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGGFGN 408 (635)
Q Consensus 332 v~IalVGkY~~l~DaY~-SI~~AL~~ag~~~~vkl~i~wi~s~~le~~~~~~~p~~y~~a~~~L--~~~DGIllPGGfG~ 408 (635)
.+|+++ ||++ .|. .+.++|+.+|+.+.+ .+.+.. . +.+ .++|||||||||++
T Consensus 30 ~~I~VL-Dfg~---q~~~liar~lre~Gv~~~i----vp~~~~-~----------------e~i~~~~~dGIILsGGp~s 84 (697)
T 2vxo_A 30 GAVVIL-DAGA---QYGKVIDRRVRELFVQSEI----FPLETP-A----------------FAIKEQGFRAIIISGGPNS 84 (697)
T ss_dssp CCEEEE-EEC-----CHHHHHHHHHHTTCCEEE----EETTCC-H----------------HHHHHHTCSEEEEEECC--
T ss_pred CEEEEE-ECCC---chHHHHHHHHHHCCCEEEE----EECCCC-H----------------HHHhhcCCCEEEECCCCCc
Confidence 479999 5663 343 467999999987654 222210 0 112 58999999999987
Q ss_pred CcchhHHHHHHHHHHcCCCEEEEehhHHHHHHHHhcccccccCCCCCccCCCCCCCeeeeCCCCCcCcCCCccccCceeE
Q 006689 409 RGVQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRT 488 (635)
Q Consensus 409 rg~eg~i~air~are~~iP~LGICLGmQllaie~GrnV~glkda~S~Ef~~~~~~pvi~~mpe~~~~h~GgtmrLG~~~v 488 (635)
+..++.....+.+.+.++|+||||+|||+|+.++|++|.+++ . .+.| .+++
T Consensus 85 ~~~~~~~~~~~~i~~~g~PvLGIC~G~QlLa~~lGG~v~~~~---~--------------------~e~G------~~~v 135 (697)
T 2vxo_A 85 VYAEDAPWFDPAIFTIGKPVLGICYGMQMMNKVFGGTVHKKS---V--------------------REDG------VFNI 135 (697)
T ss_dssp -----CCCCCGGGTTSSCCEEEEEHHHHHHHHHTTCCBCC------------------------------------CEEE
T ss_pred ccCccchhHHHHHHhCCCCEEEECHHHHHHHHHhCCeEeecC---C--------------------Cccc------eEEE
Confidence 532111111233456789999999999999999999986532 0 2334 4667
Q ss_pred EEecCCchhhhccCCceeEEEEeeeeeeeChhhhhhhcCCCeEEEEEeCCCCeEEEEEeCCCCcEEEEcccCCCcCCCCC
Q 006689 489 YFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGK 568 (635)
Q Consensus 489 ~l~~~~sll~~iyg~~~~I~erHrHrYeVnp~~v~~Le~~Gl~~sa~s~dg~~vE~iE~~~~p~fvGVQFHPE~ss~p~~ 568 (635)
.+.+++.++..+ +.... .++.|+|.|. .+ +.|++++|+++ + .++++++++++ ++|+|||||...+|.
T Consensus 136 ~~~~~~~Lf~~l-~~~~~--v~~~H~~~V~-----~l-p~g~~vlA~s~-~-~i~ai~~~~~~-i~GvQFHPE~~~t~~- 202 (697)
T 2vxo_A 136 SVDNTCSLFRGL-QKEEV--VLLTHGDSVD-----KV-ADGFKVVARSG-N-IVAGIANESKK-LYGAQFHPEVGLTEN- 202 (697)
T ss_dssp EECTTSGGGTTC-CSEEE--ECCCSSCCBS-----SC-CTTCEEEEEET-T-EEEEEEETTTT-EEEESSCTTSSSSTT-
T ss_pred EecCCChhhhcC-CccCc--ceeeccccee-----cC-CCCeEEEEEeC-C-ceEEEEeCCCC-EEEEEecccCCCCcc-
Confidence 776654445444 33333 4567888874 33 67999999985 4 69999999888 579999999998885
Q ss_pred chHHHHHHHH
Q 006689 569 PSPLFLGLIA 578 (635)
Q Consensus 569 p~pLF~~Fv~ 578 (635)
+..+|++|+.
T Consensus 203 g~~ll~nFl~ 212 (697)
T 2vxo_A 203 GKVILKNFLY 212 (697)
T ss_dssp HHHHHHHHHT
T ss_pred chhhhhhhhh
Confidence 7899999993
No 29
>2ywd_A Glutamine amidotransferase subunit PDXT; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=99.81 E-value=1.5e-19 Score=174.01 Aligned_cols=181 Identities=16% Similarity=0.199 Sum_probs=114.4
Q ss_pred cEEEEEeccCCCcchHHHHHHHHHHccccceeeeEEEEecCCCCCccccCCChhhhhHHHHhccCCCEEEECCCCCCC-c
Q 006689 332 VRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNR-G 410 (635)
Q Consensus 332 v~IalVGkY~~l~DaY~SI~~AL~~ag~~~~vkl~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIllPGGfG~r-g 410 (635)
++|+|+. + .+++.++.++|+.+|+++.+ ++.. +.+.++|||++|||++.. .
T Consensus 3 p~Igi~~-~---~~~~~~~~~~l~~~G~~~~~------~~~~------------------~~l~~~dglil~GG~~~~~~ 54 (191)
T 2ywd_A 3 GVVGVLA-L---QGDFREHKEALKRLGIEAKE------VRKK------------------EHLEGLKALIVPGGESTTIG 54 (191)
T ss_dssp CCEEEEC-S---SSCHHHHHHHHHTTTCCCEE------ECSG------------------GGGTTCSEEEECSSCHHHHH
T ss_pred cEEEEEe-c---CCchHHHHHHHHHCCCEEEE------eCCh------------------hhhccCCEEEECCCChhhhH
Confidence 5799994 3 34788999999999987654 2210 235678999999996431 1
Q ss_pred ----chhHHHHHHHHHHcC-CCEEEEehhHHHHHHHHhc-ccccccCCCCCccCCCCCCCeeeeCCCCCcCcCCCccccC
Q 006689 411 ----VQGKILAAKYAREHR-IPYLGICLGMQVAVIEFAR-SVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLG 484 (635)
Q Consensus 411 ----~eg~i~air~are~~-iP~LGICLGmQllaie~Gr-nV~glkda~S~Ef~~~~~~pvi~~mpe~~~~h~GgtmrLG 484 (635)
.....+.++.+.+++ +|+||||+|||+|+.++|+ ++.. +.. . .+.-..+ ...|. ...
T Consensus 55 ~~~~~~~~~~~i~~~~~~~~~PilGiC~G~Q~l~~~~gg~~~~~--~lg---~-----~~~~~~~-----~~~g~--~~~ 117 (191)
T 2ywd_A 55 KLAREYGIEDEVRKRVEEGSLALFGTCAGAIWLAKEIVGYPEQP--RLG---V-----LEAWVER-----NAFGR--QVE 117 (191)
T ss_dssp HHHHHTTHHHHHHHHHHTTCCEEEEETHHHHHHEEEETTCTTCC--CCC---C-----EEEEEET-----TCSCC--SSS
T ss_pred HhhhhhhHHHHHHHHHHCCCCeEEEECHHHHHHHHHhCCCCCCc--ccc---c-----cceEEEc-----CCcCC--ccc
Confidence 124577888888889 9999999999999998887 4321 100 0 0000000 00111 011
Q ss_pred ceeEEEecCCchhhhccCCceeEEEEeeeeeeeChhhhhhhcCCCeEEEEEeCCCCeEEEEEeCCCCcEEEEcccCCCcC
Q 006689 485 SRRTYFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKS 564 (635)
Q Consensus 485 ~~~v~l~~~~sll~~iyg~~~~I~erHrHrYeVnp~~v~~Le~~Gl~~sa~s~dg~~vE~iE~~~~p~fvGVQFHPE~ss 564 (635)
.+... ..+..+ ..+...+.|+|.+. .+ +.+++++|++ + ..+|+++..+ ++|+|||||+++
T Consensus 118 ~~~~~-----~~~~~~----~~~~~~~~Hs~~v~-----~l-~~~~~~~a~~-~-~~~~a~~~~~---~~gvQfHPE~~~ 177 (191)
T 2ywd_A 118 SFEED-----LEVEGL----GSFHGVFIRAPVFR-----RL-GEGVEVLARL-G-DLPVLVRQGK---VLASSFHPELTE 177 (191)
T ss_dssp EEEEE-----EEETTT----EEEEEEEESCCEEE-----EE-CTTCEEEEEE-T-TEEEEEEETT---EEEESSCGGGSS
T ss_pred ccccc-----ccccCC----CceeEEEEccccee-----cc-CCCcEEEEEE-C-CEEEEEEECC---EEEEEeCCCCCC
Confidence 11110 111111 12334456787764 12 4678899998 5 4599999753 789999999875
Q ss_pred CCCCchHHHHHHHHHHh
Q 006689 565 RPGKPSPLFLGLIAAAC 581 (635)
Q Consensus 565 ~p~~p~pLF~~Fv~aa~ 581 (635)
. + .+|++|+++|.
T Consensus 178 ~---~-~l~~~f~~~~~ 190 (191)
T 2ywd_A 178 D---P-RLHRYFLELAG 190 (191)
T ss_dssp C---C-HHHHHHHHHHT
T ss_pred C---c-HHHHHHHHHhc
Confidence 3 3 89999998863
No 30
>1q7r_A Predicted amidotransferase; structural genomics, YAAE, PDX2, predicted glutamine amidotransferase, PSI; HET: MSE; 1.90A {Geobacillus stearothermophilus} SCOP: c.23.16.1
Probab=99.81 E-value=5.1e-20 Score=182.61 Aligned_cols=186 Identities=15% Similarity=0.188 Sum_probs=117.7
Q ss_pred CccEEEEEeccCCCcchHHHHHHHHHHccccceeeeEEEEecCCCCCccccCCChhhhhHHHHhccCCCEEEECCCCCCC
Q 006689 330 EPVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNR 409 (635)
Q Consensus 330 ~~v~IalVGkY~~l~DaY~SI~~AL~~ag~~~~vkl~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIllPGGfG~r 409 (635)
..++|+|+ ++ .++|.+.+++|+.+|+.+.+ ++.. +.+.++|||+||||++..
T Consensus 22 ~~~~I~il-~~---~~~~~~~~~~l~~~G~~~~~------~~~~------------------~~l~~~Dglil~GG~~~~ 73 (219)
T 1q7r_A 22 SNMKIGVL-GL---QGAVREHVRAIEACGAEAVI------VKKS------------------EQLEGLDGLVLPGGESTT 73 (219)
T ss_dssp CCCEEEEE-SC---GGGCHHHHHHHHHTTCEEEE------ECSG------------------GGGTTCSEEEECCCCHHH
T ss_pred CCCEEEEE-eC---CCCcHHHHHHHHHCCCEEEE------ECCH------------------HHHhhCCEEEECCCChHH
Confidence 45899999 44 34677888999999876433 3321 235689999999998643
Q ss_pred c-----chhHHHHHHHHHHcCCCEEEEehhHHHHHHHHhcccccccCCCCCccCCCCCCCeeeeCCCCCcCcCCCccccC
Q 006689 410 G-----VQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLG 484 (635)
Q Consensus 410 g-----~eg~i~air~are~~iP~LGICLGmQllaie~GrnV~glkda~S~Ef~~~~~~pvi~~mpe~~~~h~GgtmrLG 484 (635)
. .....+.++.+.++++|+||||+|||+|+.++|+++.. + ... .|....+ ...|. +.+
T Consensus 74 ~~~~~~~~~~~~~i~~~~~~~~PilGIC~G~QlL~~~~gg~~~~--~-----lg~---~~~~~~~-----~~~g~--~~~ 136 (219)
T 1q7r_A 74 MRRLIDRYGLMEPLKQFAAAGKPMFGTCAGLILLAKRIVGYDEP--H-----LGL---MDITVER-----NSFGR--QRE 136 (219)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCEEEETTHHHHHEEEEESSCCC--C-----CCC---EEEEEEC-----HHHHC--CCC
T ss_pred HHHHhhhhHHHHHHHHHHHcCCeEEEECHHHHHHHHHhCCCCcC--C-----cCc---cceEEEe-----cCCCc--ccc
Confidence 1 13347888899899999999999999999988876521 1 100 0000000 00111 011
Q ss_pred ceeEEEecCCchhhhccCCceeEEEEeeeeeeeChhhhhhhcCCCeEEEEEeCCCCeEEEEEeCCCCcEEEEcccCCCcC
Q 006689 485 SRRTYFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKS 564 (635)
Q Consensus 485 ~~~v~l~~~~sll~~iyg~~~~I~erHrHrYeVnp~~v~~Le~~Gl~~sa~s~dg~~vE~iE~~~~p~fvGVQFHPE~ss 564 (635)
.+... ..+..+ + ..+...+.|++.|. .+ +.+++++|++ |+. +|+++. ++++|+|||||+++
T Consensus 137 ~~~~~-----~~~~g~-g--~~~~~~~~h~~~v~-----~l-~~~~~v~a~s-dg~-~ea~~~---~~i~GvQfHPE~~~ 197 (219)
T 1q7r_A 137 SFEAE-----LSIKGV-G--DGFVGVFIRAPHIV-----EA-GDGVDVLATY-NDR-IVAARQ---GQFLGCSFHPELTD 197 (219)
T ss_dssp CEEEE-----EEETTT-E--EEEEEEESSCCEEE-----EE-CTTCEEEEEE-TTE-EEEEEE---TTEEEESSCGGGSS
T ss_pred ceecC-----cccCCC-C--CceEEEEEecceee-----cc-CCCcEEEEEc-CCE-EEEEEE---CCEEEEEECcccCC
Confidence 11110 111121 2 12333445666553 23 5689999998 664 899987 35789999999975
Q ss_pred CCCCchHHHHHHHHHHhcc
Q 006689 565 RPGKPSPLFLGLIAAACGQ 583 (635)
Q Consensus 565 ~p~~p~pLF~~Fv~aa~~~ 583 (635)
. ..+|++|++++.++
T Consensus 198 ~----~~l~~~fl~~~~~~ 212 (219)
T 1q7r_A 198 D----HRLMQYFLNMVKEA 212 (219)
T ss_dssp C----CHHHHHHHHHHHHH
T ss_pred C----HHHHHHHHHHHHHh
Confidence 3 38999999988653
No 31
>2nv0_A Glutamine amidotransferase subunit PDXT; 3-layer(ABA) sandwich, rossmann fold, glutaminase; 1.73A {Bacillus subtilis} SCOP: c.23.16.1 PDB: 1r9g_A 2nv2_B*
Probab=99.81 E-value=1e-19 Score=176.61 Aligned_cols=185 Identities=15% Similarity=0.184 Sum_probs=115.7
Q ss_pred cEEEEEeccCCCcchHHHHHHHHHHccccceeeeEEEEecCCCCCccccCCChhhhhHHHHhccCCCEEEECCCCCCCc-
Q 006689 332 VRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRG- 410 (635)
Q Consensus 332 v~IalVGkY~~l~DaY~SI~~AL~~ag~~~~vkl~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIllPGGfG~rg- 410 (635)
+||+|+ +| .++|.+.+++|+.+|+++.+ ++.. +.+.++|||++|||++...
T Consensus 2 m~I~il-~~---~~~~~~~~~~l~~~g~~~~~------~~~~------------------~~l~~~d~iil~GG~~~~~~ 53 (196)
T 2nv0_A 2 LTIGVL-GL---QGAVREHIHAIEACGAAGLV------VKRP------------------EQLNEVDGLILPGGESTTMR 53 (196)
T ss_dssp CEEEEE-CS---SSCCHHHHHHHHHTTCEEEE------ECSG------------------GGGGGCSEEEECCSCHHHHH
T ss_pred cEEEEE-Ec---cCCcHHHHHHHHHCCCEEEE------eCCh------------------HHHhhCCEEEECCCChhhHH
Confidence 589999 45 35788888999999876432 3221 2356789999999976432
Q ss_pred ----chhHHHHHHHHHHcCCCEEEEehhHHHHHHHHhcccccccCCCCCccCCCCCCCeeeeCCCCCcCcCCCccccCce
Q 006689 411 ----VQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSR 486 (635)
Q Consensus 411 ----~eg~i~air~are~~iP~LGICLGmQllaie~GrnV~glkda~S~Ef~~~~~~pvi~~mpe~~~~h~GgtmrLG~~ 486 (635)
..+..+.++.+.++++|+||||+|||+|+.++|+++.. + ... .|....+. ..|.. .+.
T Consensus 54 ~~~~~~~~~~~i~~~~~~~~pilgIC~G~q~l~~~~gg~~~~--~-----lg~---~~~~~~~~-----~~g~~--~~~- 115 (196)
T 2nv0_A 54 RLIDTYQFMEPLREFAAQGKPMFGTCAGLIILAKEIAGSDNP--H-----LGL---LNVVVERN-----SFGRQ--VDS- 115 (196)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCEEEETHHHHHHSBCCC----C--C-----CCC---SCEEEECC-----CSCTT--TSE-
T ss_pred HHhhhHHHHHHHHHHHHCCCcEEEECHHHHHHHHHhcCCCCC--c-----ccC---CceeEecc-----CCCcc--ccc-
Confidence 12346788888889999999999999999888876521 1 100 01111000 01111 111
Q ss_pred eEEEecCCchhhhccCCceeEEEEeeeeeeeChhhhhhhcCCCeEEEEEeCCCCeEEEEEeCCCCcEEEEcccCCCcCCC
Q 006689 487 RTYFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRP 566 (635)
Q Consensus 487 ~v~l~~~~sll~~iyg~~~~I~erHrHrYeVnp~~v~~Le~~Gl~~sa~s~dg~~vE~iE~~~~p~fvGVQFHPE~ss~p 566 (635)
+..+ +.+..+ ++. +...+.|++.+. .+ +.+++++|.+ |+. +|+++.. +++|+|||||+++.
T Consensus 116 ---~~~~-~~~~~~-g~~--~~~~~~h~~~v~-----~~-~~~~~v~a~~-d~~-~~a~~~~---~~~gvQfHPE~~~~- 176 (196)
T 2nv0_A 116 ---FEAD-LTIKGL-DEP--FTGVFIRAPHIL-----EA-GENVEVLSEH-NGR-IVAAKQG---QFLGCSFHPELTED- 176 (196)
T ss_dssp ---EEEE-ECCTTC-SSC--EEEEEESCCEEE-----EE-CTTCEEEEEE-TTE-EEEEEET---TEEEESSCTTSSSC-
T ss_pred ---ccCC-cccccC-CCc--eEEEEEecceec-----cc-CCCcEEEEEE-CCE-EEEEEEC---CEEEEEECCccCCc-
Confidence 1111 233332 322 333445666653 22 5688999988 554 8999863 57899999999764
Q ss_pred CCchHHHHHHHHHHhcch
Q 006689 567 GKPSPLFLGLIAAACGQL 584 (635)
Q Consensus 567 ~~p~pLF~~Fv~aa~~~~ 584 (635)
..+|++|++++.+.+
T Consensus 177 ---~~l~~~fl~~~~~~~ 191 (196)
T 2nv0_A 177 ---HRVTQLFVEMVEEYK 191 (196)
T ss_dssp ---CHHHHHHHHHHHHHH
T ss_pred ---hHHHHHHHHHHHhhh
Confidence 289999999886544
No 32
>1ka9_H Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.23.16.1
Probab=99.80 E-value=4.3e-20 Score=180.15 Aligned_cols=184 Identities=24% Similarity=0.280 Sum_probs=115.8
Q ss_pred cEEEEEeccCCCcchHHHHHHHHHHccccceeeeEEEEecCCCCCccccCCChhhhhHHHHhccCCCEEEECCCCCCCcc
Q 006689 332 VRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRGV 411 (635)
Q Consensus 332 v~IalVGkY~~l~DaY~SI~~AL~~ag~~~~vkl~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIllPGGfG~rg~ 411 (635)
++|+|+ +|+. .++.|+.++|+.+|+++.+ ++.. +.+.++|||++|| +|++..
T Consensus 3 ~~I~ii-d~~~--~~~~~~~~~l~~~G~~~~~------~~~~------------------~~l~~~d~lil~G-~g~~~~ 54 (200)
T 1ka9_H 3 MKALLI-DYGS--GNLRSAAKALEAAGFSVAV------AQDP------------------KAHEEADLLVLPG-QGHFGQ 54 (200)
T ss_dssp CEEEEE-CSSC--SCHHHHHHHHHHTTCEEEE------ESST------------------TSCSSCSEEEECC-CSCHHH
T ss_pred cEEEEE-eCCC--ccHHHHHHHHHHCCCeEEE------ecCh------------------HHcccCCEEEECC-CCcHHH
Confidence 589999 6752 2788999999999977544 2211 1356899999977 354321
Q ss_pred -------hhHHHHHHHHHHcCCCEEEEehhHHHHHHH---HhcccccccCCCCCccCCCCCCCeeeeCCCCCcCcCCCcc
Q 006689 412 -------QGKILAAKYAREHRIPYLGICLGMQVAVIE---FARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTM 481 (635)
Q Consensus 412 -------eg~i~air~are~~iP~LGICLGmQllaie---~GrnV~glkda~S~Ef~~~~~~pvi~~mpe~~~~h~Ggtm 481 (635)
....+.++.+.++++|+||||+|||+|+.+ +|+ .-++. .+ +..+ ..++..+.+|+|+
T Consensus 55 ~~~~l~~~~~~~~i~~~~~~~~PilGIC~G~Qll~~~~~~~Gg-~~~l~-----~~----~g~v-~~~~~~~~~~~G~-- 121 (200)
T 1ka9_H 55 VMRAFQESGFVERVRRHLERGLPFLGICVGMQVLYEGSEEAPG-VRGLG-----LV----PGEV-RRFRAGRVPQMGW-- 121 (200)
T ss_dssp HHHTTSSSCTHHHHHHHHHTTCCEEECTHHHHTTSSEETTSTT-CCCCC-----SS----SSEE-EECCSSSSSEEEE--
T ss_pred HHHHHHhcCHHHHHHHHHHcCCeEEEEcHHHHHHHHhccccCC-cCCcc-----cc----ccEE-EECCCCCCCceeE--
Confidence 346788999889999999999999999877 453 11110 01 1112 1111112234444
Q ss_pred ccCceeEEEecCCchhhhccCCceeEEEEeeeeeeeChhhhhhhcCCCeEEEEEeCC-CCeEEEEEeCCCCcEEEEcccC
Q 006689 482 RLGSRRTYFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDET-SQRMEIVELPNHPYFIGVQFHP 560 (635)
Q Consensus 482 rLG~~~v~l~~~~sll~~iyg~~~~I~erHrHrYeVnp~~v~~Le~~Gl~~sa~s~d-g~~vE~iE~~~~p~fvGVQFHP 560 (635)
+++.+.+ + +.++.+ . ...+.|+|.+ +. .++ .+ |++++ |..++++...+ +++|+||||
T Consensus 122 ----~~v~~~~--~-l~~~~~--~--~~~~~Hs~~~-~~------~~~-~v-a~s~~~g~~~~~~~~~~--~i~gvQfHP 179 (200)
T 1ka9_H 122 ----NALEFGG--A-FAPLTG--R--HFYFANSYYG-PL------TPY-SL-GKGEYEGTPFTALLAKE--NLLAPQFHP 179 (200)
T ss_dssp ----EECEECG--G-GGGGTT--C--EEEEEESEEC-CC------CTT-CC-EEEEETTEEEEEEEECS--SEEEESSCT
T ss_pred ----EEEEech--h-hhcCCC--C--CEEEeccccc-CC------CCC-cE-EEEEeCCeEEEEEEeeC--CEEEEecCC
Confidence 4566655 4 666653 2 3456799988 42 122 45 77776 63356665554 578999999
Q ss_pred CCcCCCCCchHHH---HHHHHHH
Q 006689 561 EYKSRPGKPSPLF---LGLIAAA 580 (635)
Q Consensus 561 E~ss~p~~p~pLF---~~Fv~aa 580 (635)
|++. .....+| ++|++.+
T Consensus 180 E~~~--~~g~~l~~~~~~F~~~~ 200 (200)
T 1ka9_H 180 EKSG--KAGLAFLALARRYFEVL 200 (200)
T ss_dssp TSSH--HHHHHHHHHHHHHC---
T ss_pred CcCc--cchhHHHHHHHHHHhhC
Confidence 9985 3456899 9998753
No 33
>2iss_D Glutamine amidotransferase subunit PDXT; (beta/alpha)8-barrel, alpha/beta three layer sandwich, lyase transferase; HET: 5RP; 2.90A {Thermotoga maritima}
Probab=99.78 E-value=4.2e-19 Score=174.50 Aligned_cols=186 Identities=12% Similarity=0.106 Sum_probs=111.3
Q ss_pred CCCccEEEEEeccCCCcchHHHHHHHHHHccccceeeeEEEEecCCCCCccccCCChhhhhHHHHhccCCCEEEECCCCC
Q 006689 328 LHEPVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFG 407 (635)
Q Consensus 328 ~~~~v~IalVGkY~~l~DaY~SI~~AL~~ag~~~~vkl~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIllPGGfG 407 (635)
+.++++|+|+ +| . .+|.++.++|+.+|+++.+ ++.. +.+.++|||+||||+.
T Consensus 17 ~~~~~~I~ii-~~-~--~~~~~~~~~l~~~g~~~~~------~~~~------------------~~l~~~d~iil~GG~~ 68 (208)
T 2iss_D 17 RGSHMKIGVL-GV-Q--GDVREHVEALHKLGVETLI------VKLP------------------EQLDMVDGLILPGGES 68 (208)
T ss_dssp ---CCEEEEE-CS-S--SCHHHHHHHHHHTTCEEEE------ECSG------------------GGGGGCSEEEECSSCH
T ss_pred CCCCcEEEEE-EC-C--CchHHHHHHHHHCCCEEEE------eCCh------------------HHHhhCCEEEECCCcH
Confidence 3456899999 67 2 2899999999998865432 3211 2356799999999853
Q ss_pred CCc-----chhHHHHHHHHHHcCCCEEEEehhHHHHHHHHhcccccccCCCCCccCCCCCCCeeeeCCCCCcCcCCCccc
Q 006689 408 NRG-----VQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMR 482 (635)
Q Consensus 408 ~rg-----~eg~i~air~are~~iP~LGICLGmQllaie~GrnV~glkda~S~Ef~~~~~~pvi~~mpe~~~~h~Ggtmr 482 (635)
... ..+..++++.+.++++|+||||+|||+|+.++++... ++.. --|....+ ...|..
T Consensus 69 ~~~~~~~~~~~~~~~i~~~~~~g~PilGIC~G~QlL~~~~gg~~~--~~lg--------~~~~~v~~-----~~~g~~-- 131 (208)
T 2iss_D 69 TTMIRILKEMDMDEKLVERINNGLPVFATCAGVILLAKRIKNYSQ--EKLG--------VLDITVER-----NAYGRQ-- 131 (208)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCEEEETHHHHHHEEEEC---C--CCCC--------CEEEEEET-----TTTCSG--
T ss_pred HHHHhhhhhhhHHHHHHHHHHCCCeEEEECHHHHHHHHHcCCCCC--CCcc--------ccceEEEe-----cCCCcc--
Confidence 211 1234678888888999999999999999988877431 1100 00000000 001111
Q ss_pred cCceeEEEecCCchhhhccCCceeEEEEeeeeeeeChhhhhhhcCCCeEEEEEeCCCCeEEEEEeCCCCcEEEEcccCCC
Q 006689 483 LGSRRTYFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEY 562 (635)
Q Consensus 483 LG~~~v~l~~~~sll~~iyg~~~~I~erHrHrYeVnp~~v~~Le~~Gl~~sa~s~dg~~vE~iE~~~~p~fvGVQFHPE~ 562 (635)
.+. +..+ +.+..+.++ ++...+.|++.+. .+ +.+++++|.+ |+ .+|+++.. + ++|+|||||+
T Consensus 132 ~~~----~~~~-~~~~~~~~~--~~~~~~~h~~~v~-----~~-~~~~~v~a~~-d~-~~~a~~~~--~-i~GvQfHPE~ 193 (208)
T 2iss_D 132 VES----FETF-VEIPAVGKD--PFRAIFIRAPRIV-----ET-GKNVEILATY-DY-DPVLVKEG--N-ILACTFHPEL 193 (208)
T ss_dssp GGC----EEEE-ECCGGGCSS--CEEEEESSCCEEE-----EE-CSSCEEEEEE-TT-EEEEEEET--T-EEEESSCGGG
T ss_pred ccc----ccCC-cccccCCCC--ceEEEEEeCcccc-----cC-CCCcEEEEEE-CC-EEEEEEEC--C-EEEEEeCCCc
Confidence 000 1112 333332211 2333334555443 22 5688999988 55 48999863 3 7899999999
Q ss_pred cCCCCCchHHHHHHHHHH
Q 006689 563 KSRPGKPSPLFLGLIAAA 580 (635)
Q Consensus 563 ss~p~~p~pLF~~Fv~aa 580 (635)
.+.+ .+|++|+++|
T Consensus 194 ~~~~----~l~~~fl~~~ 207 (208)
T 2iss_D 194 TDDL----RLHRYFLEMV 207 (208)
T ss_dssp SSCC----HHHHHHHTTC
T ss_pred CCcH----HHHHHHHHHh
Confidence 8653 8999998754
No 34
>2abw_A PDX2 protein, glutaminase; PLP-synthase, vitamin B6, malaria, transferase; HET: PG4; 1.62A {Plasmodium falciparum} SCOP: c.23.16.1 PDB: 4ads_G
Probab=99.72 E-value=2e-17 Score=164.22 Aligned_cols=198 Identities=13% Similarity=0.146 Sum_probs=112.6
Q ss_pred ccEEEEEeccCCCcchHHHHHHHHHHc---cccceeeeEEEEecCCCCCccccCCChhhhhHHHHhccCCCEEEECCCCC
Q 006689 331 PVRIAMVGKYTGLSDAYLSILKALLHA---SVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFG 407 (635)
Q Consensus 331 ~v~IalVGkY~~l~DaY~SI~~AL~~a---g~~~~vkl~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIllPGGfG 407 (635)
+++|+|+ +|. .++.+.+++|+.+ |+.+. +++. + +.+.++|||+||||+.
T Consensus 3 ~~~I~Il-~~~---~~~~~~~~~l~~~~~~G~~~~------~~~~-----------~-------~~l~~~dglil~GG~~ 54 (227)
T 2abw_A 3 EITIGVL-SLQ---GDFEPHINHFIKLQIPSLNII------QVRN-----------V-------HDLGLCDGLVIPGGES 54 (227)
T ss_dssp CEEEEEE-CTT---SCCHHHHHHHHTTCCTTEEEE------EECS-----------H-------HHHHTCSEEEECCSCH
T ss_pred CcEEEEE-eCC---CCcHHHHHHHHHhccCCeEEE------EEcC-----------c-------cccccCCEEEECCCcH
Confidence 4789999 454 2667889999998 75532 2321 0 3456799999999974
Q ss_pred CC-----cc--hhHHHHHHHHHHc-CCCEEEEehhHHHHHHHHhcccccccCCCCCccCCCCCCCeeeeCCCCCcCcCCC
Q 006689 408 NR-----GV--QGKILAAKYAREH-RIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGG 479 (635)
Q Consensus 408 ~r-----g~--eg~i~air~are~-~iP~LGICLGmQllaie~GrnV~glkda~S~Ef~~~~~~pvi~~mpe~~~~h~Gg 479 (635)
+. .. .+..+.++.+.+. ++|+||||+|||+|+.++++.+..-+.....++.- .++...+. ..|.
T Consensus 55 ~~~~~~~~~d~~~~~~~i~~~~~~~g~PilGIC~G~QlL~~~~gg~~~~~~~~~~~~lG~---~~~~~~~~-----~~g~ 126 (227)
T 2abw_A 55 TTVRRCCAYENDTLYNALVHFIHVLKKPIWGTCAGCILLSKNVENIKLYSNFGNKFSFGG---LDITICRN-----FYGS 126 (227)
T ss_dssp HHHHHHTTHHHHHHHHHHHHHHHTSCCCEEEETHHHHHTEEEEECCCSCCTTGGGSCCCC---EEEEEECC-----C---
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHhcCCEEEEECHHHHHHHHHhcCCccccccccccccCc---eeEEEEec-----CCCc
Confidence 31 11 3567888888888 99999999999999988877641100000011100 01100000 0010
Q ss_pred c-cccCceeEEEecCCchhhhccCCceeEEEEeeeeeeeChhhhhhhcCCCeEEEEEeC-----CCCeEEEEEeCCCCcE
Q 006689 480 T-MRLGSRRTYFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDE-----TSQRMEIVELPNHPYF 553 (635)
Q Consensus 480 t-mrLG~~~v~l~~~~sll~~iyg~~~~I~erHrHrYeVnp~~v~~Le~~Gl~~sa~s~-----dg~~vE~iE~~~~p~f 553 (635)
. .++ ...+.+ ++ +..+.+.. ...+..|+|.|. .+.+.+++++|+++ ++. +++++.. ++
T Consensus 127 ~~~~~-~~~~~~-~~---~~~~~g~~--~~~~~~h~~~v~-----~~~~~~~~vla~~~~~~~g~~~-~~a~~~~---~v 190 (227)
T 2abw_A 127 QNDSF-ICSLNI-IS---DSSAFKKD--LTAACIRAPYIR-----EILSDEVKVLATFSHESYGPNI-IAAVEQN---NC 190 (227)
T ss_dssp -CCEE-EEECEE-CC---CCTTCCTT--CEEEEESCCEEE-----EECCTTCEEEEEEEETTTEEEE-EEEEEET---TE
T ss_pred ccccc-cccccc-cc---ccccCCCc--eeEEEEEcceEe-----ecCCCCcEEEEEcccccCCCCc-eEEEEEC---CE
Confidence 0 000 001111 11 00001111 112234555442 11146788999886 444 8888863 47
Q ss_pred EEEcccCCCcCCCCCchHHHHHHHHHHhcch
Q 006689 554 IGVQFHPEYKSRPGKPSPLFLGLIAAACGQL 584 (635)
Q Consensus 554 vGVQFHPE~ss~p~~p~pLF~~Fv~aa~~~~ 584 (635)
+|+|||||++..+ .+|++|+++|..+.
T Consensus 191 ~gvQfHPE~~~~~----~l~~~Fl~~~~~~~ 217 (227)
T 2abw_A 191 LGTVFHPELLPHT----AFQQYFYEKVKNYK 217 (227)
T ss_dssp EEESSCGGGSSCC----HHHHHHHHHHHHHH
T ss_pred EEEEECCeeCCCc----HHHHHHHHHHHhhh
Confidence 8999999998643 89999999986543
No 35
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=99.64 E-value=6.4e-17 Score=181.41 Aligned_cols=197 Identities=14% Similarity=0.133 Sum_probs=118.3
Q ss_pred cEEEEEeccCCCcchHHHHHHHHHHccccceeeeEEEEecCCCCCccccCCChhhhhHHHHhccCCCEEEECCCCCCCcc
Q 006689 332 VRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRGV 411 (635)
Q Consensus 332 v~IalVGkY~~l~DaY~SI~~AL~~ag~~~~vkl~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIllPGGfG~rg~ 411 (635)
.+|+|+ +|+. .++.++.++|+.+|+.+.+ ++..+ . ..+.++|||||||| |++..
T Consensus 5 ~~I~Ii-d~~~--g~~~~~~~~l~~~G~~~~v------v~~~~--~--------------~~l~~~DglILpGg-G~~~~ 58 (555)
T 1jvn_A 5 PVVHVI-DVES--GNLQSLTNAIEHLGYEVQL------VKSPK--D--------------FNISGTSRLILPGV-GNYGH 58 (555)
T ss_dssp CEEEEE-CCSC--SCCHHHHHHHHHTTCEEEE------ESSGG--G--------------CCSTTCSCEEEEEC-SCHHH
T ss_pred CEEEEE-ECCC--CCHHHHHHHHHHCCCEEEE------ECCcc--c--------------cccccCCEEEECCC-CchHh
Confidence 589999 6863 2567899999999976543 32111 0 12668999999883 44321
Q ss_pred -------hhHHHHHHHHHHcCCCEEEEehhHHHHHHHH--hcccccccCCCCCccCCCCCCCeeeeCCC--CCcCcCCCc
Q 006689 412 -------QGKILAAKYAREHRIPYLGICLGMQVAVIEF--ARSVLNLRDANSTEFDPNTKNPCVIFMPE--GSKTHMGGT 480 (635)
Q Consensus 412 -------eg~i~air~are~~iP~LGICLGmQllaie~--GrnV~glkda~S~Ef~~~~~~pvi~~mpe--~~~~h~Ggt 480 (635)
.+..++++.+.+.++|+||||+|||+|+.++ ++..-+|.. + ...+.. .+. ...+|+||
T Consensus 59 ~~~~l~~~~~~~~i~~~~~~g~PiLGIC~G~QlL~~a~~egg~~~~Lg~-----l----gg~v~~-~~~~~~~~~~~G~- 127 (555)
T 1jvn_A 59 FVDNLFNRGFEKPIREYIESGKPIMGIXVGLQALFAGSVESPKSTGLNY-----I----DFKLSR-FDDSEKPVPEIGW- 127 (555)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCEEEEEHHHHTTEEEETTBTTCCCCCS-----E----EEEEEE-CCTTTSCSSEEEE-
T ss_pred HhhhhhhccHHHHHHHHHHcCCcEEEEchhhhhhhhhhhcCCCccccCC-----C----CcEEEE-CCcCCCCCccccc-
Confidence 2357788888889999999999999999776 111111100 0 011111 111 12355565
Q ss_pred cccCceeEEEecCCchhhhccCCceeEEEEeeeeeeeChhhh-hhhcCCCeEEEEEeCCC--CeEEEEEeCCCCcEEEEc
Q 006689 481 MRLGSRRTYFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMI-ARLENAGLSFTGKDETS--QRMEIVELPNHPYFIGVQ 557 (635)
Q Consensus 481 mrLG~~~v~l~~~~sll~~iyg~~~~I~erHrHrYeVnp~~v-~~Le~~Gl~~sa~s~dg--~~vE~iE~~~~p~fvGVQ 557 (635)
+++.+. ++++..+. .... .++.|+|.+..... ..+.+.++.++|+++.+ ..+++++. . +++|+|
T Consensus 128 -----~~v~~~--~~L~~~l~-~~~~--~~~vHS~~~~~i~~~~~~L~~g~~vlA~s~~~~D~~i~ai~~--~-~i~GvQ 194 (555)
T 1jvn_A 128 -----NSCIPS--ENLFFGLD-PYKR--YYFVHSFAAILNSEKKKNLENDGWKIAKAKYGSEEFIAAVNK--N-NIFATQ 194 (555)
T ss_dssp -----ECCCCC--TTCCTTCC-TTSC--EEEEESEECBCCHHHHHHHHHTTCEEEEEEETTEEEEEEEEE--T-TEEEES
T ss_pred -----eEEEEc--CHHHhhCC-CCce--EEEEEEEEEEecccccccCCCCCEEEEEEcCCCCCeEEEEEe--C-CEEEEE
Confidence 333333 25555553 2212 24568888754210 00113456788877643 25899983 3 478999
Q ss_pred ccCCCcCCCCCchHHHHHHHHHH
Q 006689 558 FHPEYKSRPGKPSPLFLGLIAAA 580 (635)
Q Consensus 558 FHPE~ss~p~~p~pLF~~Fv~aa 580 (635)
||||+++ .....+|.+|+++.
T Consensus 195 FHPE~s~--~~g~~l~~~Fl~~~ 215 (555)
T 1jvn_A 195 FHPEKSG--KAGLNVIENFLKQQ 215 (555)
T ss_dssp SBGGGSH--HHHHHHHHHHHTTC
T ss_pred eCcEecC--hhHHHHHHHHHhcc
Confidence 9999863 22467999999875
No 36
>2h2w_A Homoserine O-succinyltransferase; TM0881, (EC 2.3.1.46), HOM O-transsuccinylase, HTS, (TM0881), structural genomics; 2.52A {Thermotoga maritima}
Probab=99.43 E-value=1.4e-12 Score=136.77 Aligned_cols=195 Identities=14% Similarity=0.117 Sum_probs=113.8
Q ss_pred CccEEEEEeccCCCcchHH-HHHHHHHHccccceeeeEEEEecCCCCCccc-cCCChhhhhHHHHh--ccCCCEEEECCC
Q 006689 330 EPVRIAMVGKYTGLSDAYL-SILKALLHASVDLRKKLVIDWIPACDLEDAT-EKENPDAYKAAWKL--LKGADGILVPGG 405 (635)
Q Consensus 330 ~~v~IalVGkY~~l~DaY~-SI~~AL~~ag~~~~vkl~i~wi~s~~le~~~-~~~~p~~y~~a~~~--L~~~DGIllPGG 405 (635)
..+||+|+ +-....-.|. .+.+.|......+. +.++...+-+..+ ..+...+|...+.. ..++||+||.||
T Consensus 46 rplkI~IL-nlmp~k~~te~qf~rlL~~~~~qv~----v~~~~~~~~~~~~~~~~hl~~~y~~f~~~~~~~~DglIITGs 120 (312)
T 2h2w_A 46 RPLEILIL-NLMPDKIKTEIQLLRLLGNTPLQVN----VTLLYTETHKPKHTPIEHILKFYTTFSAVKDRKFDGFIITGA 120 (312)
T ss_dssp CCEEEEEE-CCCSSHHHHHHHHHHHHHSSSSCEE----EEEECCSCCCCCSSCHHHHHHHCBCGGGTTTCCEEEEEECCC
T ss_pred CCceEEEE-eCCCCcCchHHHHHHHhcCCCCcEE----EEEEEccCCCCCCccHHHHhhccCCcccccccCcCEEEECCC
Confidence 46899999 4433322333 34555555554433 3344332211111 00000111111222 367999999999
Q ss_pred CCCC-------cchhHHHHHHHHHHcCCCEEEEehhHHHHHHHHhccc-ccccCCCCCccCCCCCCCeeeeCCCCCcCcC
Q 006689 406 FGNR-------GVQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSV-LNLRDANSTEFDPNTKNPCVIFMPEGSKTHM 477 (635)
Q Consensus 406 fG~r-------g~eg~i~air~are~~iP~LGICLGmQllaie~GrnV-~glkda~S~Ef~~~~~~pvi~~mpe~~~~h~ 477 (635)
+=.. -+....+.+++++++++|+||||+|+|+++.++++-. ..++
T Consensus 121 P~~~~~~ed~~yw~el~~li~~~~~~~~p~LGIC~GaQ~~l~~~~G~~k~~~~--------------------------- 173 (312)
T 2h2w_A 121 PVELLPFEEVDYWEELTEIMEWSRHNVYSTMFICWAAQAGLYYFYGIPKYELP--------------------------- 173 (312)
T ss_dssp SCTTSCGGGSTTHHHHHHHHHHHHHHEEEEEEETHHHHHHHHHHHCCCCEEEE---------------------------
T ss_pred CCCCCCCccCchHHHHHHHHHHHHHcCCcEEEECHHHHHHHHHhCCCccccCC---------------------------
Confidence 8432 2456788899999999999999999999766766522 1110
Q ss_pred CCccccCceeEEEecCCchhhhccCCceeEEEEeeeeeeeChhhhhhhcCCCeEEEEEeCCCCeEEEEEeCCCCcEEEEc
Q 006689 478 GGTMRLGSRRTYFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQ 557 (635)
Q Consensus 478 GgtmrLG~~~v~l~~~~sll~~iyg~~~~I~erHrHrYeVnp~~v~~Le~~Gl~~sa~s~dg~~vE~iE~~~~p~fvGVQ 557 (635)
...+|..+..+.+.+++++.+- +.. ..-|.|.-++..+.+... .|++++|.|+... +++++.++.. ++++|
T Consensus 174 --~K~~Gv~~~~~~~~~pL~~g~~-~~f--~vphsr~~e~~~~~v~~~--pga~vLA~S~~~~-~q~~~~~~~~-~~~vQ 244 (312)
T 2h2w_A 174 --QKLSGVYKHRVAKDSVLFRGHD-DFF--WAPHSRYTEVKKEDIDKV--PELEILAESDEAG-VYVVANKSER-QIFVT 244 (312)
T ss_dssp --EEEEEEEEEEESSCCGGGTTCC-SEE--EEEEEEEEECCHHHHTTC--C-CEEEEEETTTE-EEEEECSSSS-EEEEC
T ss_pred --CCEEEEEEEEEcCCCccccCCC-Cce--EeeEEeccccCHHHccCC--CCCEEEEcCCCCc-ceEEEecCCC-EEEEE
Confidence 1123455666555445555442 232 233433345555555543 5999999998765 8999997765 57999
Q ss_pred ccCCCcCC
Q 006689 558 FHPEYKSR 565 (635)
Q Consensus 558 FHPE~ss~ 565 (635)
|||||...
T Consensus 245 gHPEyd~~ 252 (312)
T 2h2w_A 245 GHPEYDRY 252 (312)
T ss_dssp SCTTCCTT
T ss_pred CCCCCCHH
Confidence 99999754
No 37
>2vdj_A Homoserine O-succinyltransferase; methionine biosynthesis, amino-acid biosynthesis, homoserine transacetylase, homoserine transsuccinylase; 2.00A {Bacillus cereus} PDB: 2ghr_A
Probab=99.41 E-value=3.3e-12 Score=133.32 Aligned_cols=136 Identities=15% Similarity=0.126 Sum_probs=92.1
Q ss_pred ccCCCEEEECCCCCCC-------cchhHHHHHHHHHHcCCCEEEEehhHHHHHHHHhccc-ccccCCCCCccCCCCCCCe
Q 006689 394 LKGADGILVPGGFGNR-------GVQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSV-LNLRDANSTEFDPNTKNPC 465 (635)
Q Consensus 394 L~~~DGIllPGGfG~r-------g~eg~i~air~are~~iP~LGICLGmQllaie~GrnV-~glkda~S~Ef~~~~~~pv 465 (635)
..++||+||.||+=.. -+....+.+++++++++|+||||+|+|++..++++-. ..++
T Consensus 97 ~~~~DglIITGap~~~~~~ed~~yw~el~~li~~~~~~~~~~lgIC~GaQ~~l~~~~G~~k~~~~--------------- 161 (301)
T 2vdj_A 97 NEKFDGLIITGAPVETLSFEEVDYWEELKRIMEYSKTNVTSTLHICWGAQAGLYHHYGVQKYPLK--------------- 161 (301)
T ss_dssp TSCEEEEEECCCTTTTSCGGGSTTHHHHHHHHHHHHHHEEEEEEETHHHHHHHHHHHCCCCEEEE---------------
T ss_pred ccccCEEEECCCCCcCCCcccCchHHHHHHHHHHHHHcCCcEEEEcHHHHHHHHHhCCCccccCC---------------
Confidence 4689999999998422 2456788899999999999999999999766665522 1111
Q ss_pred eeeCCCCCcCcCCCccccCceeEEEec-CCchhhhccCCceeEEEEeeeeeeeChhhhhhhcCCCeEEEEEeCCCCeEEE
Q 006689 466 VIFMPEGSKTHMGGTMRLGSRRTYFQI-KDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEI 544 (635)
Q Consensus 466 i~~mpe~~~~h~GgtmrLG~~~v~l~~-~~sll~~iyg~~~~I~erHrHrYeVnp~~v~~Le~~Gl~~sa~s~dg~~vE~ 544 (635)
....|-.+..+.. .+.+++.+- +. ...-|.|.-++..+.+..+ .|++++|.|+... +++
T Consensus 162 --------------~K~~Gv~~~~~~~~~~pL~~g~~-~~--f~~phsr~~~~~~~~v~~~--pga~vLA~S~~~~-~~~ 221 (301)
T 2vdj_A 162 --------------EKMFGVFEHEVREQHVKLLQGFD-EL--FFAVHSRHTEVRESDIREV--KELTLLANSEEAG-VHL 221 (301)
T ss_dssp --------------EEEEEEEEEEECCSSCGGGTTCC-SE--EEEEEEEEEECCHHHHHTC--TTEEEEEEETTTE-EEE
T ss_pred --------------CCEEEEEEEEecCCCCccccCCC-Cc--eEeeeEeccCcCHHHccCC--CCCEEEEeCCCCc-ceE
Confidence 1112344554433 335555432 23 2334544445666666655 4999999998765 899
Q ss_pred EEeCCCCcEEEEcccCCCcCC
Q 006689 545 VELPNHPYFIGVQFHPEYKSR 565 (635)
Q Consensus 545 iE~~~~p~fvGVQFHPE~ss~ 565 (635)
++.++.. ++++||||||...
T Consensus 222 ~~~~~~~-~~~vQgHpEyd~~ 241 (301)
T 2vdj_A 222 VIGQEGR-QVFALGHSEYSCD 241 (301)
T ss_dssp EEEGGGT-EEEECSCTTCCTT
T ss_pred EEecCCC-EEEEECCCCCCHH
Confidence 9997655 5799999999765
No 38
>3ugj_A Phosphoribosylformylglycinamidine synthase; amidotransferase, glutaminase, thioester intermediate, ligas; HET: ADP; 1.78A {Salmonella enterica subsp} PDB: 1t3t_A* 3ujn_A* 3umm_A*
Probab=98.85 E-value=2e-08 Score=121.75 Aligned_cols=196 Identities=19% Similarity=0.217 Sum_probs=114.9
Q ss_pred ccEEEEEeccCCCcchHHHHHHHHHHccccceeeeEEEEecCCCCCccccCCChhhhhHHHHhccCCCEEEECCCC--CC
Q 006689 331 PVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGF--GN 408 (635)
Q Consensus 331 ~v~IalVGkY~~l~DaY~SI~~AL~~ag~~~~vkl~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIllPGGf--G~ 408 (635)
++||+|+ +|... .+-.++.+||+++|+++.. .|+. ++.. + .+.+.++|+|++|||| |+
T Consensus 1047 ~pkVaIi-~~~G~-N~~~~~~~A~~~aG~~~~~----v~~~--dl~~-----~-------~~~l~~~d~lvlPGGfSygD 1106 (1303)
T 3ugj_A 1047 RPKVAVL-REQGV-NSHVEMAAAFHRAGFDAID----VHMS--DLLG-----G-------RIGLGNFHALVACGGFSYGD 1106 (1303)
T ss_dssp CCEEEEE-ECTTC-CCHHHHHHHHHHTTCEEEE----EEHH--HHHT-----T-------SCCGGGCSEEEECCSCGGGG
T ss_pred CCEEEEE-ecCCc-CCHHHHHHHHHHhCCceEE----Eeec--cccc-----C-------cccHhhCCEEEECCCCcchh
Confidence 4699999 67433 2568999999999987643 3442 1100 0 0246789999999996 44
Q ss_pred C---cc---------hhHHHHHHHH-HHcCCCEEEEehhHHHHHHHHhcccccccCCCCCccCCCCCCCeeeeCCCCCcC
Q 006689 409 R---GV---------QGKILAAKYA-REHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKT 475 (635)
Q Consensus 409 r---g~---------eg~i~air~a-re~~iP~LGICLGmQllaie~GrnV~glkda~S~Ef~~~~~~pvi~~mpe~~~~ 475 (635)
. +. ..+.++++.+ .+.++|+||||+|||+|+ +..+ + ++.+. ..| .++.+
T Consensus 1107 ~l~~g~~~a~~~l~~~~l~~~l~~~~~~~g~pvLGICnG~QlL~-e~~g-l--lPg~~--------~~p--~l~~N---- 1168 (1303)
T 3ugj_A 1107 VLGAGEGWAKSILFNHRVRDEFETFFHRPQTLALGVCNGCQMMS-NLRE-L--IPGSE--------LWP--RFVRN---- 1168 (1303)
T ss_dssp TTSTTHHHHHHHHTSHHHHHHHHHHHHSSSCEEEEETHHHHHHH-TTGG-G--STTCT--------TCC--EEECC----
T ss_pred hhccchhHHHHHHhchhHHHHHHHHHHhCCCcEEEECHHHHHHH-HhcC-c--CCCCC--------CCC--eEecC----
Confidence 1 10 2345556654 357899999999999996 4311 1 22221 112 12221
Q ss_pred cCCCccccCceeEEEecCCc-hhhhccCCceeEEEEeee-eeeeC-hhhhhhhcCCCeEEEEE-------------eCCC
Q 006689 476 HMGGTMRLGSRRTYFQIKDC-KSAKLYGNRTFIDERHRH-RYEVN-PDMIARLENAGLSFTGK-------------DETS 539 (635)
Q Consensus 476 h~GgtmrLG~~~v~l~~~~s-ll~~iyg~~~~I~erHrH-rYeVn-p~~v~~Le~~Gl~~sa~-------------s~dg 539 (635)
..+...--...+++..+.| +++.+-|....|+..|.. ||.+. ++.+++|+.+|....-. |++|
T Consensus 1169 -~s~~f~~r~~~~~v~~~~s~~~~~~~g~~~~i~vaHgEG~~~~~~~~~l~~l~~~~~v~~rY~d~~g~~~~~yp~NPNG 1247 (1303)
T 3ugj_A 1169 -HSDRFEARFSLVEVTQSPSLLLQGMVGSQMPIAVSHGEGRVEVRDDAHLAALESKGLVALRYVDNFGKVTETYPANPNG 1247 (1303)
T ss_dssp -TTSSCEEEEEEEEECCCSCGGGTTCTTCEEEEEEEESSCEEECSSHHHHHHHHHTTCEEEEEBCTTSCBCCSTTTSSSC
T ss_pred -CCCCeEEeCeEEEECCCCChhhhccCCCEEeeeeEeCCCCeeeCCHHHHHHHHhCCcEEEEEeCCCCCcccCCCCCCCC
Confidence 1111100011233333334 444443434456677753 45553 45677777777665543 3566
Q ss_pred C--eEEEEEeCCCCcEEEEcccCCCcCCC
Q 006689 540 Q--RMEIVELPNHPYFIGVQFHPEYKSRP 566 (635)
Q Consensus 540 ~--~vE~iE~~~~p~fvGVQFHPE~ss~p 566 (635)
. -|++|-.++.+ ++|.-.|||....+
T Consensus 1248 S~~~IaGi~s~~Gr-vlg~MpHPEr~~~~ 1275 (1303)
T 3ugj_A 1248 SPNGITAVTTENGR-VTIMMPHPERVFRT 1275 (1303)
T ss_dssp CGGGEEEEECTTSS-EEEESSBGGGSSBG
T ss_pred ChhhceEeECCCCC-EEEEcCChHHcccc
Confidence 4 38999988887 57999999987654
No 39
>1fy2_A Aspartyl dipeptidase; serine protease, catalytic triad, strand-helix MO hydrolase; 1.20A {Salmonella typhimurium} SCOP: c.23.16.4 PDB: 1fye_A
Probab=98.28 E-value=3.8e-07 Score=91.19 Aligned_cols=88 Identities=17% Similarity=0.195 Sum_probs=61.6
Q ss_pred ccEEEEEeccCC---Ccc-hHHHHHHHHHHccccceeeeEEEEecCCCCCccccCCChhhhhHHHHhccCCCEEEECCCC
Q 006689 331 PVRIAMVGKYTG---LSD-AYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGF 406 (635)
Q Consensus 331 ~v~IalVGkY~~---l~D-aY~SI~~AL~~ag~~~~vkl~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIllPGGf 406 (635)
..+|++| +|.. -.| ...|+.++|++.|+++.. +... + + ..+.+.++|+|++|||-
T Consensus 31 ~~~i~iI-~~a~~~~~~~~~~~~~~~al~~lG~~~~~------v~~~--~------d------~~~~l~~ad~I~lpGG~ 89 (229)
T 1fy2_A 31 RRSAVFI-PFAGVTQTWDEYTDKTAEVLAPLGVNVTG------IHRV--A------D------PLAAIEKAEIIIVGGGN 89 (229)
T ss_dssp CCEEEEE-CTTCCSSCHHHHHHHHHHHHGGGTCEEEE------TTSS--S------C------HHHHHHHCSEEEECCSC
T ss_pred CCeEEEE-ECCCCCCCHHHHHHHHHHHHHHCCCEEEE------Eecc--c------c------HHHHHhcCCEEEECCCc
Confidence 4699999 6863 122 346889999999976433 2110 0 1 12567889999999952
Q ss_pred CCCc-----chhHHHHHHHHHHcCCCEEEEehhHHHHH
Q 006689 407 GNRG-----VQGKILAAKYAREHRIPYLGICLGMQVAV 439 (635)
Q Consensus 407 G~rg-----~eg~i~air~are~~iP~LGICLGmQlla 439 (635)
-.+- ..++.++++.+.++++|++|||.|||+|+
T Consensus 90 ~~~~~~~l~~~gl~~~l~~~~~~G~p~~G~sAG~~~l~ 127 (229)
T 1fy2_A 90 TFQLLKESRERGLLAPMADRVKRGALYIGWSAGANLAC 127 (229)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTTCEEEEETHHHHHTS
T ss_pred HHHHHHHHHHCChHHHHHHHHHcCCEEEEECHHHHhhc
Confidence 1111 13578888888888999999999999996
No 40
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=98.26 E-value=1.1e-06 Score=86.86 Aligned_cols=90 Identities=17% Similarity=0.078 Sum_probs=64.3
Q ss_pred ccEEEEEeccCCCc---c-hHHHHHHHHHHccccceeeeEEEEecCCCCCccccCCChhhhhHHHHhccCCCEEEECCCC
Q 006689 331 PVRIAMVGKYTGLS---D-AYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGF 406 (635)
Q Consensus 331 ~v~IalVGkY~~l~---D-aY~SI~~AL~~ag~~~~vkl~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIllPGGf 406 (635)
..+|++| .|.+.. | ...|+.++|++.|+++.+ ++-.+ .++ .+..+.+.++|+|++|||
T Consensus 27 ~~~i~~I-p~As~~~~~~~~~~s~~~a~~~lG~~v~~------~~i~~-------~~~---~~~~~~l~~ad~I~l~GG- 88 (206)
T 3l4e_A 27 GKTVTFI-PTASTVEEVTFYVEAGKKALESLGLLVEE------LDIAT-------ESL---GEITTKLRKNDFIYVTGG- 88 (206)
T ss_dssp TCEEEEE-CGGGGGCSCCHHHHHHHHHHHHTTCEEEE------CCTTT-------SCH---HHHHHHHHHSSEEEECCS-
T ss_pred CCEEEEE-CCCCCCCCHHHHHHHHHHHHHHcCCeEEE------EEecC-------CCh---HHHHHHHHhCCEEEECCC-
Confidence 4799999 686542 2 447899999999986443 22111 011 112356789999999995
Q ss_pred CCCc-------chhHHHHHHHHHHcCCCEEEEehhHHHHH
Q 006689 407 GNRG-------VQGKILAAKYAREHRIPYLGICLGMQVAV 439 (635)
Q Consensus 407 G~rg-------~eg~i~air~are~~iP~LGICLGmQlla 439 (635)
+.. ..++.++++.+.++++|++|||.|||+++
T Consensus 89 -~~~~l~~~L~~~gl~~~l~~~~~~G~p~~G~sAGa~~l~ 127 (206)
T 3l4e_A 89 -NTFFLLQELKRTGADKLILEEIAAGKLYIGESAGAVITS 127 (206)
T ss_dssp -CHHHHHHHHHHHTHHHHHHHHHHTTCEEEEETHHHHTTS
T ss_pred -CHHHHHHHHHHCChHHHHHHHHHcCCeEEEECHHHHHhc
Confidence 421 24678899998889999999999999995
No 41
>1oi4_A Hypothetical protein YHBO; PFPI/THIJ family, complete proteome, PFPI, THIJ, bacterial targets at IGS-CNRS, france, BIGS, structural genomics; 2.03A {Escherichia coli} SCOP: c.23.16.2
Probab=97.48 E-value=0.0003 Score=67.77 Aligned_cols=101 Identities=17% Similarity=0.199 Sum_probs=63.3
Q ss_pred CccEEEEEeccCCCcc-hHHHHHHHHHHccccceeeeEEEEecCCC-CCcc----ccCCChhhhhHHHHh--ccCCCEEE
Q 006689 330 EPVRIAMVGKYTGLSD-AYLSILKALLHASVDLRKKLVIDWIPACD-LEDA----TEKENPDAYKAAWKL--LKGADGIL 401 (635)
Q Consensus 330 ~~v~IalVGkY~~l~D-aY~SI~~AL~~ag~~~~vkl~i~wi~s~~-le~~----~~~~~p~~y~~a~~~--L~~~DGIl 401 (635)
...||+++ -+..+.+ ...+..+.|+.+|+++.+. -.+... +... ....+. . .+. ..++|+|+
T Consensus 22 ~~~kV~il-l~~g~~~~e~~~~~~~l~~ag~~v~~v----s~~~~~~v~~~~g~~~v~~~~-~----l~~~~~~~~D~li 91 (193)
T 1oi4_A 22 LSKKIAVL-ITDEFEDSEFTSPADEFRKAGHEVITI----EKQAGKTVKGKKGEASVTIDK-S----IDEVTPAEFDALL 91 (193)
T ss_dssp CCCEEEEE-CCTTBCTHHHHHHHHHHHHTTCEEEEE----ESSTTCEEECTTSSCEEECCE-E----GGGCCGGGCSEEE
T ss_pred cCCEEEEE-ECCCCCHHHHHHHHHHHHHCCCEEEEE----ECCCCcceecCCCCeEEECCC-C----hHHCCcccCCEEE
Confidence 34689988 4554443 3567889999998765432 111110 1000 000000 0 111 25789999
Q ss_pred ECCCCCCC---cchhHHHHHHHHHHcCCCEEEEehhHHHHHH
Q 006689 402 VPGGFGNR---GVQGKILAAKYAREHRIPYLGICLGMQVAVI 440 (635)
Q Consensus 402 lPGGfG~r---g~eg~i~air~are~~iP~LGICLGmQllai 440 (635)
||||+|.. ..+..++.++.+.++++|+.|||.|.|+|+-
T Consensus 92 vpGG~~~~~l~~~~~l~~~l~~~~~~gk~i~aIC~G~~lLa~ 133 (193)
T 1oi4_A 92 LPGGHSPDYLRGDNRFVTFTRDFVNSGKPVFAICHGPQLLIS 133 (193)
T ss_dssp ECCBTHHHHHTTSHHHHHHHHHHHHTTCCEEEETTTHHHHHH
T ss_pred ECCCcCHHHhhhCHHHHHHHHHHHHcCCEEEEECHHHHHHHH
Confidence 99997642 2345788889888999999999999999973
No 42
>3l18_A Intracellular protease I; gatase1_PFPI_LIKE, hydrolase; 1.78A {Thermococcus onnurineus} SCOP: c.23.16.2 PDB: 1g2i_A
Probab=97.00 E-value=0.0019 Score=60.22 Aligned_cols=100 Identities=14% Similarity=0.247 Sum_probs=61.5
Q ss_pred ccEEEEEeccCCCcch-HHHHHHHHHHccccceeee-EEEEecCCC-CCccccCCChhhhhHHHHhc--cCCCEEEECCC
Q 006689 331 PVRIAMVGKYTGLSDA-YLSILKALLHASVDLRKKL-VIDWIPACD-LEDATEKENPDAYKAAWKLL--KGADGILVPGG 405 (635)
Q Consensus 331 ~v~IalVGkY~~l~Da-Y~SI~~AL~~ag~~~~vkl-~i~wi~s~~-le~~~~~~~p~~y~~a~~~L--~~~DGIllPGG 405 (635)
.+||+++ =|..+.+. .....+.|+.+++++.+.- +-.-+.+.. +. ...+ ...+.+ ..+|.|+||||
T Consensus 2 ~~ki~il-~~~g~~~~e~~~~~~~l~~ag~~v~~vs~~~~~v~~~~g~~---i~~~-----~~~~~~~~~~~D~livpGG 72 (168)
T 3l18_A 2 SMKVLFL-SADGFEDLELIYPLHRIKEEGHEVYVASFQRGKITGKHGYS---VNVD-----LTFEEVDPDEFDALVLPGG 72 (168)
T ss_dssp CCEEEEE-CCTTBCHHHHHHHHHHHHHTTCEEEEEESSSEEEECTTSCE---EEEC-----EEGGGCCGGGCSEEEECCB
T ss_pred CcEEEEE-eCCCccHHHHHHHHHHHHHCCCEEEEEECCCCEEecCCCcE---Eecc-----CChhHCCHhhCCEEEECCC
Confidence 3578888 35544432 5567889999987654420 000111110 00 0000 001222 36899999999
Q ss_pred CCCC---cchhHHHHHHHHHHcCCCEEEEehhHHHHH
Q 006689 406 FGNR---GVQGKILAAKYAREHRIPYLGICLGMQVAV 439 (635)
Q Consensus 406 fG~r---g~eg~i~air~are~~iP~LGICLGmQlla 439 (635)
+|.. ..+..++.++.+.++++|+.+||-|.++|+
T Consensus 73 ~~~~~~~~~~~l~~~l~~~~~~~k~i~aiC~G~~~La 109 (168)
T 3l18_A 73 KAPEIVRLNEKAVMITRRMFEDDKPVASICHGPQILI 109 (168)
T ss_dssp SHHHHHTTCHHHHHHHHHHHHTTCCEEEETTTHHHHH
T ss_pred cCHHHhccCHHHHHHHHHHHHCCCEEEEECHhHHHHH
Confidence 8642 235678889999999999999999999996
No 43
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans}
Probab=96.10 E-value=0.021 Score=54.18 Aligned_cols=100 Identities=19% Similarity=0.222 Sum_probs=60.8
Q ss_pred ccEEEEEeccCCCcc-hHHHHHHHHHHccccceeeeEEEEecCCCCCc------cc--cCCChhhhhHHHHhc--cCCCE
Q 006689 331 PVRIAMVGKYTGLSD-AYLSILKALLHASVDLRKKLVIDWIPACDLED------AT--EKENPDAYKAAWKLL--KGADG 399 (635)
Q Consensus 331 ~v~IalVGkY~~l~D-aY~SI~~AL~~ag~~~~vkl~i~wi~s~~le~------~~--~~~~p~~y~~a~~~L--~~~DG 399 (635)
..||+++ =|..+.+ .+....+.|..+++++.+. ..+...+.. .. ...+ .. .+.+ ..+|+
T Consensus 9 ~~~v~il-~~~g~~~~e~~~~~~~l~~ag~~v~~v----s~~~~~v~~~~~~~~~g~~v~~~-~~----~~~~~~~~~D~ 78 (190)
T 2vrn_A 9 GKKIAIL-AADGVEEIELTSPRAAIEAAGGTTELI----SLEPGEIQSMKGDIEPQEKYRVD-HV----VSEVQVSDYDG 78 (190)
T ss_dssp TCEEEEE-CCTTCBHHHHHHHHHHHHHTTCEEEEE----ESSSSEEEEEETTTEEEEEEECS-EE----GGGCCGGGCSE
T ss_pred CCEEEEE-eCCCCCHHHHHHHHHHHHHCCCEEEEE----ecCCCccccccccccCCcEEeCC-CC----hhhCChhhCCE
Confidence 4689988 4654543 2556678899998765432 111100000 00 0000 00 1222 47899
Q ss_pred EEECCCCCC----CcchhHHHHHHHHHHcCCCEEEEehhHHHHHH
Q 006689 400 ILVPGGFGN----RGVQGKILAAKYAREHRIPYLGICLGMQVAVI 440 (635)
Q Consensus 400 IllPGGfG~----rg~eg~i~air~are~~iP~LGICLGmQllai 440 (635)
|+||||++. +..+..++.++.+.++++|+.+||-|-++|+-
T Consensus 79 livpGG~~~~~~~~~~~~l~~~l~~~~~~gk~i~aiC~G~~~La~ 123 (190)
T 2vrn_A 79 LLLPGGTVNPDKLRLEEGAMKFVRDMYDAGKPIAAICHGPWSLSE 123 (190)
T ss_dssp EEECCCTHHHHHHTTCHHHHHHHHHHHHTTCCEEEC-CTTHHHHH
T ss_pred EEECCCchhHHHHhhCHHHHHHHHHHHHcCCEEEEECHhHHHHHh
Confidence 999999742 23456788899998999999999999999863
No 44
>2rk3_A Protein DJ-1; parkinson'S disease, THIJ, PFPI, chaperone, cytoplasm, disease mutation, nucleus, oncogene, oxidation, parkinson disease; 1.05A {Homo sapiens} PDB: 1pdv_A 1pdw_A 3cy6_A 1pe0_A 3cza_A 3cyf_A 2rk4_A 3cz9_A* 3ezg_A 3f71_A 3sf8_A 1p5f_A 1ps4_A 1q2u_A 1soa_A 1ucf_A 2or3_A 3bwe_A 3b38_A 3b36_A ...
Probab=95.93 E-value=0.011 Score=56.69 Aligned_cols=100 Identities=14% Similarity=0.114 Sum_probs=60.4
Q ss_pred cEEEEEeccCCCcch-HHHHHHHHHHccccceeeeEEEEecCC-CCCc-cccCCChhhhhHHHHhc---cCCCEEEECCC
Q 006689 332 VRIAMVGKYTGLSDA-YLSILKALLHASVDLRKKLVIDWIPAC-DLED-ATEKENPDAYKAAWKLL---KGADGILVPGG 405 (635)
Q Consensus 332 v~IalVGkY~~l~Da-Y~SI~~AL~~ag~~~~vkl~i~wi~s~-~le~-~~~~~~p~~y~~a~~~L---~~~DGIllPGG 405 (635)
.||+++ =|..+.+. +....+.|+.+++++.+. ..+.. .+.. ....-.++ ...+.+ ..+|.|+||||
T Consensus 4 ~~v~il-l~~g~~~~e~~~~~~~l~~ag~~v~~v----s~~~~~~v~~~~g~~v~~d---~~l~~~~~~~~~D~livpGG 75 (197)
T 2rk3_A 4 KRALVI-LAKGAEEMETVIPVDVMRRAGIKVTVA----GLAGKDPVQCSRDVVICPD---ASLEDAKKEGPYDVVVLPGG 75 (197)
T ss_dssp CEEEEE-ECTTCCHHHHHHHHHHHHHTTCEEEEE----ETTCSSCEECTTSCEECCS---EEHHHHHTTCCCSEEEECCC
T ss_pred CEEEEE-ECCCCcHHHHHHHHHHHHHCCCEEEEE----EcCCCCccccCCCCEEeCC---cCHHHcCCccCCCEEEECCC
Confidence 467777 35444432 456778999998765432 11111 0100 00000010 011223 68999999999
Q ss_pred CCCC----cchhHHHHHHHHHHcCCCEEEEehhHHHHH
Q 006689 406 FGNR----GVQGKILAAKYAREHRIPYLGICLGMQVAV 439 (635)
Q Consensus 406 fG~r----g~eg~i~air~are~~iP~LGICLGmQlla 439 (635)
++.. ..+..+..++.+.++++|+.+||-|-++|+
T Consensus 76 ~~~~~~l~~~~~~~~~l~~~~~~gk~i~aiC~G~~~La 113 (197)
T 2rk3_A 76 NLGAQNLSESAAVKEILKEQENRKGLIATICAGPTALL 113 (197)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHTTCEEEEETTTHHHHH
T ss_pred chhHHHhhhCHHHHHHHHHHHHcCCEEEEECHHHHHHH
Confidence 7422 234577888888899999999999999886
No 45
>2ab0_A YAJL; DJ-1/THIJ superfamily, alpha-beta hydrolase fold, unknown function; 1.10A {Escherichia coli} SCOP: c.23.16.2
Probab=95.64 E-value=0.014 Score=56.62 Aligned_cols=100 Identities=13% Similarity=0.114 Sum_probs=59.1
Q ss_pred EEEEEeccCCCcc-hHHHHHHHHHHccccceeeeEEE-----EecCCCCCccccCCChhhhhHHHHhccCCCEEEECCCC
Q 006689 333 RIAMVGKYTGLSD-AYLSILKALLHASVDLRKKLVID-----WIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGF 406 (635)
Q Consensus 333 ~IalVGkY~~l~D-aY~SI~~AL~~ag~~~~vkl~i~-----wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIllPGGf 406 (635)
||+++ =+..+.+ ......+.|+.+|+++.+. .+. .+.+..- .....+ ..+.+ -...++|+|+||||+
T Consensus 4 kV~il-l~~g~~~~e~~~~~~~l~~ag~~v~~v-s~~~~~~~~v~~~~g--~~v~~~-~~l~~--~~~~~~D~livpGG~ 76 (205)
T 2ab0_A 4 SALVC-LAPGSEETEAVTTIDLLVRGGIKVTTA-SVASDGNLAITCSRG--VKLLAD-APLVE--VADGEYDVIVLPGGI 76 (205)
T ss_dssp EEEEE-ECTTCCHHHHHHHHHHHHHTTCEEEEE-ECSSTTCCEEECTTS--CEEECS-EEHHH--HTTSCCSEEEECCCH
T ss_pred EEEEE-EcCCCcHHHHHHHHHHHHHCCCEEEEE-eCCCCCCceeecCCC--eEEecC-CCHHH--CCcccCCEEEECCCc
Confidence 67777 3444432 2456678899998765432 000 1111110 000000 01111 013679999999997
Q ss_pred CCC----cchhHHHHHHHHHHcCCCEEEEehhH-HHHH
Q 006689 407 GNR----GVQGKILAAKYAREHRIPYLGICLGM-QVAV 439 (635)
Q Consensus 407 G~r----g~eg~i~air~are~~iP~LGICLGm-Qlla 439 (635)
+.. ..+..+..++.+.++++|+.+||-|- ++|+
T Consensus 77 ~~~~~l~~~~~l~~~l~~~~~~gk~i~aiC~G~~~lLa 114 (205)
T 2ab0_A 77 KGAECFRDSTLLVETVKQFHRSGRIVAAICAAPATVLV 114 (205)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHTTCEEEEETHHHHHHTT
T ss_pred ccHHHhccCHHHHHHHHHHHHcCCEEEEECHhHHHHHH
Confidence 532 23557788888889999999999999 8886
No 46
>4hcj_A THIJ/PFPI domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta-alpha sandwich; HET: MSE; 1.12A {Brachyspira murdochii}
Probab=95.62 E-value=0.0096 Score=57.08 Aligned_cols=45 Identities=20% Similarity=0.152 Sum_probs=38.6
Q ss_pred cCCCEEEECCCCCCCc---chhHHHHHHHHHHcCCCEEEEehhHHHHH
Q 006689 395 KGADGILVPGGFGNRG---VQGKILAAKYAREHRIPYLGICLGMQVAV 439 (635)
Q Consensus 395 ~~~DGIllPGGfG~rg---~eg~i~air~are~~iP~LGICLGmQlla 439 (635)
.++|+|+||||+|... .+..++.++.+.++++|+.+||-|-++|+
T Consensus 68 ~~yD~liiPGG~g~~~l~~~~~~~~~l~~~~~~~k~iaaIC~g~~~La 115 (177)
T 4hcj_A 68 VEFDAVVFVGGIGCITLWDDWRTQGLAKLFLDNQKIVAGIGSGVVIMA 115 (177)
T ss_dssp GGCSEEEECCSGGGGGGTTCHHHHHHHHHHHHTTCEEEEETTHHHHHH
T ss_pred hHCCEEEECCCccHHHHhhCHHHHHHHHHHHHhCCEEEEecccHHHHH
Confidence 5789999999988643 35678889999999999999999998886
No 47
>3er6_A Putative transcriptional regulator protein; structural genomics, unknown function, DNA-binding, transcription regulation, PSI-2; 1.90A {Vibrio parahaemolyticus}
Probab=95.47 E-value=0.025 Score=55.14 Aligned_cols=105 Identities=13% Similarity=0.047 Sum_probs=61.9
Q ss_pred CccEEEEEeccCCCcch-HHHHHHHHHHccccce-eeeEEEEecCCC--CCcc---ccCCChhhhhHHHHhccCCCEEEE
Q 006689 330 EPVRIAMVGKYTGLSDA-YLSILKALLHASVDLR-KKLVIDWIPACD--LEDA---TEKENPDAYKAAWKLLKGADGILV 402 (635)
Q Consensus 330 ~~v~IalVGkY~~l~Da-Y~SI~~AL~~ag~~~~-vkl~i~wi~s~~--le~~---~~~~~p~~y~~a~~~L~~~DGIll 402 (635)
...+|+++ =|..+.+. .....+.|..++.... -..++..+..+. +... ....+ ...+.+..+|.|+|
T Consensus 7 ~~~~v~il-l~~g~~~~e~~~~~d~l~~a~~~~~~~~~~v~~vs~~~~~v~~~~G~~v~~d-----~~~~~~~~~D~liv 80 (209)
T 3er6_A 7 KNLRVVAL-APTGRYFASIISSLEILETAAEFAEFQGFMTHVVTPNNRPLIGRGGISVQPT-----AQWQSFDFTNILII 80 (209)
T ss_dssp CCEEEEEE-CCCTTSCHHHHHHHHHHHHHHHHTTCSCEEEEEECTTSSCEEETTTEEEECS-----SCGGGCSCCSEEEE
T ss_pred CCeEEEEE-EeCCCCHHHHHHHHHHHHHHHhhcCCCCcEEEEEeCCCCceecCCCeEEeCC-----cCccccCCCCEEEE
Confidence 45688888 36555433 5567788877652100 001122222211 1000 00000 01234568999999
Q ss_pred CCCCCCC-----cchhHHHHHHHHHHcCCCEEEEehhHHHHHH
Q 006689 403 PGGFGNR-----GVQGKILAAKYAREHRIPYLGICLGMQVAVI 440 (635)
Q Consensus 403 PGGfG~r-----g~eg~i~air~are~~iP~LGICLGmQllai 440 (635)
|||.+.. ..+..++.++.+.++++++.+||-|-.+|+-
T Consensus 81 pGg~~~~~~~~~~~~~l~~~l~~~~~~g~~iaaIC~G~~~La~ 123 (209)
T 3er6_A 81 GSIGDPLESLDKIDPALFDWIRELHLKGSKIVAIDTGIFVVAK 123 (209)
T ss_dssp CCCSCHHHHGGGSCHHHHHHHHHHHHTTCEEEEETTHHHHHHH
T ss_pred CCCCCchhhhccCCHHHHHHHHHHHhcCCEEEEEcHHHHHHHH
Confidence 9997642 2456788899999999999999999988863
No 48
>4e08_A DJ-1 beta; flavodoxin-like fold, stress response, motor protein; 2.00A {Drosophila melanogaster}
Probab=95.32 E-value=0.037 Score=52.67 Aligned_cols=98 Identities=11% Similarity=0.116 Sum_probs=58.6
Q ss_pred cEEEEEeccCCCcc-hHHHHHHHHHHccccceeeeEEEEecC-CCCCcc---ccCCChhhhhHHHHhc--cCCCEEEECC
Q 006689 332 VRIAMVGKYTGLSD-AYLSILKALLHASVDLRKKLVIDWIPA-CDLEDA---TEKENPDAYKAAWKLL--KGADGILVPG 404 (635)
Q Consensus 332 v~IalVGkY~~l~D-aY~SI~~AL~~ag~~~~vkl~i~wi~s-~~le~~---~~~~~p~~y~~a~~~L--~~~DGIllPG 404 (635)
.||+++ =+..+.+ .+....+.|+.+++++.+. -.+. ..+... ....+. ..+.+ ..+|.|+|||
T Consensus 6 kkv~il-l~~g~~~~e~~~~~~~l~~ag~~v~~~----s~~~~~~v~~~~g~~i~~d~-----~l~~~~~~~~D~livpG 75 (190)
T 4e08_A 6 KSALVI-LAPGAEEMEFIIAADVLRRAGIKVTVA----GLNGGEAVKCSRDVQILPDT-----SLAQVASDKFDVVVLPG 75 (190)
T ss_dssp CEEEEE-ECTTCCHHHHHHHHHHHHHTTCEEEEE----ESSSSSCEECTTSCEEECSE-----ETGGGTTCCCSEEEECC
T ss_pred cEEEEE-ECCCchHHHHHHHHHHHHHCCCEEEEE----ECCCCcceecCCCcEEECCC-----CHHHCCcccCCEEEECC
Confidence 367766 2433432 3556778999998765442 1111 011000 000000 01222 4689999999
Q ss_pred CCC-CC---cchhHHHHHHHHHHcCCCEEEEehhHHHHH
Q 006689 405 GFG-NR---GVQGKILAAKYAREHRIPYLGICLGMQVAV 439 (635)
Q Consensus 405 GfG-~r---g~eg~i~air~are~~iP~LGICLGmQlla 439 (635)
|++ .. ..+..++.++.+.++++|+.+||-|-++|+
T Consensus 76 G~~~~~~~~~~~~~~~~l~~~~~~~k~i~aiC~G~~~La 114 (190)
T 4e08_A 76 GLGGSNAMGESSLVGDLLRSQESGGGLIAAICAAPTVLA 114 (190)
T ss_dssp CHHHHHHHHHCHHHHHHHHHHHHTTCEEEEETTTHHHHH
T ss_pred CChHHHHhhhCHHHHHHHHHHHHCCCEEEEECHHHHHHH
Confidence 953 22 234578888999999999999999999986
No 49
>3l3b_A ES1 family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography, isopr biosynthesis; 1.90A {Ehrlichia chaffeensis}
Probab=94.88 E-value=0.018 Score=57.93 Aligned_cols=47 Identities=21% Similarity=0.313 Sum_probs=39.3
Q ss_pred cCCCEEEECCCCCC---------------CcchhHHHHHHHHHHcCCCEEEEehhHHHHHHH
Q 006689 395 KGADGILVPGGFGN---------------RGVQGKILAAKYAREHRIPYLGICLGMQVAVIE 441 (635)
Q Consensus 395 ~~~DGIllPGGfG~---------------rg~eg~i~air~are~~iP~LGICLGmQllaie 441 (635)
.++|+|+||||+|. +..+...+.++.+.++++|+.+||-|-.+|+-+
T Consensus 106 ~~~D~livPGG~~~~~~L~~~~~~~~~~~~~~~~l~~~lr~~~~~gk~IaaIC~G~~~La~a 167 (242)
T 3l3b_A 106 EEFDMLVIPGGYGVAKNFSNLFDEDKENDYILPEFKNAVREFYNAKKPIGAVCISPAVVVAL 167 (242)
T ss_dssp GGCSEEEECCCHHHHHHHBSTTSCC--CCCBCHHHHHHHHHHHHTTCCEEEETTHHHHHHHH
T ss_pred ccCCEEEEcCCcchhhhhhhhhccccccccCCHHHHHHHHHHHHcCCEEEEECHHHHHHHHh
Confidence 46899999999863 233567888999999999999999999999743
No 50
>3cne_A Putative protease I; structural genomics, PSI-2, MCSG, protein struct initiative, midwest center for structural genomics; HET: FMN; 1.99A {Bacteroides thetaiotaomicron vpi-5482}
Probab=94.50 E-value=0.026 Score=52.85 Aligned_cols=46 Identities=15% Similarity=0.119 Sum_probs=37.5
Q ss_pred cCCCEEEECCC--C-CCCc------chhHHHHHHHHHHcCCCEEEEehhHHHHHH
Q 006689 395 KGADGILVPGG--F-GNRG------VQGKILAAKYAREHRIPYLGICLGMQVAVI 440 (635)
Q Consensus 395 ~~~DGIllPGG--f-G~rg------~eg~i~air~are~~iP~LGICLGmQllai 440 (635)
..+|.|+|||| + |... .+..++.++.+.++++|+.+||-|-++|+-
T Consensus 65 ~~~D~livpGG~~~~~~~~l~~~~~~~~~~~~l~~~~~~gk~i~aiC~G~~~La~ 119 (175)
T 3cne_A 65 DEFDALVFSCGDAVPVFQQYANQPYNVDLMEVIKTFGEKGKMMIGHCAGAMMFDF 119 (175)
T ss_dssp GGCSEEEEECCTTGGGGGGCTTCHHHHHHHHHHHHHHHTTCEEEEETTHHHHHHH
T ss_pred ccCCEEEECCCcCcccHHHHhhcccCHHHHHHHHHHHHCCCEEEEECHHHHHHHH
Confidence 57899999999 6 5422 245777888888899999999999999873
No 51
>1vhq_A Enhancing lycopene biosynthesis protein 2; structural genomics, unknown function; 1.65A {Escherichia coli} SCOP: c.23.16.2 PDB: 1oy1_A
Probab=94.38 E-value=0.027 Score=55.61 Aligned_cols=47 Identities=21% Similarity=0.279 Sum_probs=39.0
Q ss_pred cCCCEEEECCCCCCC--------------cchhHHHHHHHHHHcCCCEEEEehhHHHHHHH
Q 006689 395 KGADGILVPGGFGNR--------------GVQGKILAAKYAREHRIPYLGICLGMQVAVIE 441 (635)
Q Consensus 395 ~~~DGIllPGGfG~r--------------g~eg~i~air~are~~iP~LGICLGmQllaie 441 (635)
.++|+|+||||+|.. ..+..++.++.+.++++|+.+||-|-++|+-+
T Consensus 89 ~~~D~livpGG~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~gk~vaaIC~G~~~La~a 149 (232)
T 1vhq_A 89 AELDALIVPGGFGAAKNLSNFASLGSECTVDRELKALAQAMHQAGKPLGFMCIAPAMLPKI 149 (232)
T ss_dssp GGCSEEEECCSTHHHHTSBCHHHHGGGCCBCHHHHHHHHHHHHTTCCEEEETTGGGGHHHH
T ss_pred ccCCEEEECCCcchHHHHhhhhccccccccCHHHHHHHHHHHHcCCEEEEECHHHHHHHHH
Confidence 478999999998741 13567888999999999999999999998743
No 52
>3f5d_A Protein YDEA; unknow protein, PSI-II, nysgrc, structural genomics, protein structure initiative; 2.06A {Bacillus subtilis}
Probab=94.32 E-value=0.057 Score=52.69 Aligned_cols=45 Identities=18% Similarity=0.194 Sum_probs=37.9
Q ss_pred cCCCEEEECCCCCCCc-chhHHHHHHHHHHcCCCEEEEehhHHHHH
Q 006689 395 KGADGILVPGGFGNRG-VQGKILAAKYAREHRIPYLGICLGMQVAV 439 (635)
Q Consensus 395 ~~~DGIllPGGfG~rg-~eg~i~air~are~~iP~LGICLGmQlla 439 (635)
..+|.|+||||.|... .+..++.++.+.++++|+.+||-|-++|+
T Consensus 62 ~~~D~livpGG~~~~~~~~~l~~~l~~~~~~gk~iaaiC~G~~~La 107 (206)
T 3f5d_A 62 ANFNLLVMIGGDSWSNDNKKLLHFVKTAFQKNIPIAAICGAVDFLA 107 (206)
T ss_dssp SCCSEEEECCBSCCCCCCHHHHHHHHHHHHTTCCEEEETHHHHHHH
T ss_pred cCCCEEEEcCCCChhhcCHHHHHHHHHHHHcCCEEEEECHHHHHHH
Confidence 3789999999986543 34578888988899999999999999986
No 53
>3uk7_A Class I glutamine amidotransferase-like domain-CO protein; rossmann fold, cytosol; 2.05A {Arabidopsis thaliana}
Probab=94.27 E-value=0.1 Score=55.44 Aligned_cols=46 Identities=22% Similarity=0.322 Sum_probs=38.5
Q ss_pred cCCCEEEECCCCCCC---cchhHHHHHHHHHHcCCCEEEEehhHHHHHH
Q 006689 395 KGADGILVPGGFGNR---GVQGKILAAKYAREHRIPYLGICLGMQVAVI 440 (635)
Q Consensus 395 ~~~DGIllPGGfG~r---g~eg~i~air~are~~iP~LGICLGmQllai 440 (635)
..+|.|+||||+|.. ..+..+..++.+.++++|+.+||-|-++|+-
T Consensus 281 ~~~D~livpGg~~~~~~~~~~~~~~~l~~~~~~~~~i~aiC~g~~~La~ 329 (396)
T 3uk7_A 281 SSYDALVIPGGRAPEYLALNEHVLNIVKEFMNSEKPVASICHGQQILAA 329 (396)
T ss_dssp GGCSEEEECCBSHHHHHTTCHHHHHHHHHHHHTTCCEEEEGGGHHHHHH
T ss_pred ccCCEEEECCCcchhhhccCHHHHHHHHHHHHCCCEEEEEchHHHHHHH
Confidence 478999999998642 2356788899999999999999999999863
No 54
>2fex_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, MIDW center for structural genomics, MCSG; 1.70A {Agrobacterium tumefaciens} SCOP: c.23.16.2
Probab=94.22 E-value=0.023 Score=53.98 Aligned_cols=44 Identities=20% Similarity=0.269 Sum_probs=36.9
Q ss_pred CCCEEEECCCCCCC--cchhHHHHHHHHHHcCCCEEEEehhHHHHH
Q 006689 396 GADGILVPGGFGNR--GVQGKILAAKYAREHRIPYLGICLGMQVAV 439 (635)
Q Consensus 396 ~~DGIllPGGfG~r--g~eg~i~air~are~~iP~LGICLGmQlla 439 (635)
.+|+|+||||.+.. ..+..+..++.+.++++|+.+||-|-++|+
T Consensus 63 ~~D~livpGG~~~~~~~~~~l~~~l~~~~~~~k~i~aiC~G~~~La 108 (188)
T 2fex_A 63 DIDALVIPGGLSWEKGTAADLGGLVKRFRDRDRLVAGICAAASALG 108 (188)
T ss_dssp TCSEEEECCBSHHHHTCCCCCHHHHHHHHHTTCEEEEETHHHHHHH
T ss_pred cCCEEEECCCCcccccccHHHHHHHHHHHHCCCEEEEECHHHHHHH
Confidence 78999999997532 234567889999999999999999999986
No 55
>3efe_A THIJ/PFPI family protein; structural GEN csgid, center for structural genomics of infectious disease chaperone; 2.30A {Bacillus anthracis}
Probab=94.02 E-value=0.065 Score=52.18 Aligned_cols=45 Identities=18% Similarity=0.113 Sum_probs=38.1
Q ss_pred cCCCEEEECCCCCCC--cchhHHHHHHHHHHcCCCEEEEehhHHHHH
Q 006689 395 KGADGILVPGGFGNR--GVQGKILAAKYAREHRIPYLGICLGMQVAV 439 (635)
Q Consensus 395 ~~~DGIllPGGfG~r--g~eg~i~air~are~~iP~LGICLGmQlla 439 (635)
..+|.|+||||.+.+ ..+..++.++.+.++++|+.+||-|-.+|+
T Consensus 73 ~~~D~livpGG~~~~~~~~~~l~~~l~~~~~~gk~iaaiC~G~~~La 119 (212)
T 3efe_A 73 ESKDLLILPGGTTWSEEIHQPILERIGQALKIGTIVAAICGATDALA 119 (212)
T ss_dssp CTTCEEEECCCSCTTSGGGHHHHHHHHHHHHHTCEEEEETHHHHHHH
T ss_pred cCCCEEEECCCCccccccCHHHHHHHHHHHHCCCEEEEEcHHHHHHH
Confidence 379999999998754 235678889999899999999999998886
No 56
>1u9c_A APC35852; structural genomics, protein structure initiative, MCSG, PAR disease, chaperone, cysteine protease, PSI; 1.35A {Geobacillus stearothermophilus} SCOP: c.23.16.2
Probab=93.97 E-value=0.039 Score=53.74 Aligned_cols=45 Identities=24% Similarity=0.349 Sum_probs=38.3
Q ss_pred cCCCEEEECCCCCCC----cchhHHHHHHHHHHcCCCEEEEehhHHHHH
Q 006689 395 KGADGILVPGGFGNR----GVQGKILAAKYAREHRIPYLGICLGMQVAV 439 (635)
Q Consensus 395 ~~~DGIllPGGfG~r----g~eg~i~air~are~~iP~LGICLGmQlla 439 (635)
..+|+|+||||.|.. ..+..++.++.+.++++|+.+||-|-++|+
T Consensus 88 ~~~D~livpGG~~~~~~l~~~~~l~~~l~~~~~~~k~iaaiC~G~~~La 136 (224)
T 1u9c_A 88 HGFDAIFLPGGHGTMFDFPDNETLQYVLQQFAEDGRIIAAVCHGPSGLV 136 (224)
T ss_dssp SSCSEEEECCCTTHHHHSTTCHHHHHHHHHHHHTTCEEEEETTGGGGGT
T ss_pred hhCCEEEECCCcchHHHhhcCHHHHHHHHHHHHCCCEEEEEChHHHHHH
Confidence 479999999998742 345678889999999999999999999885
No 57
>3ej6_A Catalase-3; heme, hydrogen iron, metal-binding, oxidoreductase, peroxidase; HET: NAG HEM; 2.30A {Neurospora crassa}
Probab=93.83 E-value=0.25 Score=56.68 Aligned_cols=96 Identities=11% Similarity=0.072 Sum_probs=62.2
Q ss_pred ccEEEEEeccCCCcc-hHHHHHHHHHHccccceeeeEEEEecCCCCCccccCCChhhhhHHHHhccCCCEEEECCCCCC-
Q 006689 331 PVRIAMVGKYTGLSD-AYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGN- 408 (635)
Q Consensus 331 ~v~IalVGkY~~l~D-aY~SI~~AL~~ag~~~~vkl~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIllPGGfG~- 408 (635)
+.||||+-.-+...+ ....+.++|+.+|+.+.+. ... ... .. | ..|.+ .....+|+|+||||...
T Consensus 537 grKVaILvadG~fE~~El~~p~~aL~~aGa~V~vV------sp~-~g~-Gv--D-~t~~~--~~s~~fDAVvlPGG~~~~ 603 (688)
T 3ej6_A 537 TLRVGVLSTTKGGSLDKAKALKEQLEKDGLKVTVI------AEY-LAS-GV--D-QTYSA--ADATAFDAVVVAEGAERV 603 (688)
T ss_dssp TCEEEEECCSSSSHHHHHHHHHHHHHHTTCEEEEE------ESS-CCT-TC--C-EETTT--CCGGGCSEEEECTTCCTT
T ss_pred CCEEEEEccCCCccHHHHHHHHHHHHHCCCEEEEE------eCC-CCC-Cc--c-cCccc--CChhcCcEEEECCCcccc
Confidence 468988732111222 4678899999999987662 211 100 00 0 00110 01246899999999532
Q ss_pred ----------CcchhHHHHHHHHHHcCCCEEEEehhHHHHH
Q 006689 409 ----------RGVQGKILAAKYAREHRIPYLGICLGMQVAV 439 (635)
Q Consensus 409 ----------rg~eg~i~air~are~~iP~LGICLGmQlla 439 (635)
+.....+..++.+.++++|+-.||-|-++|.
T Consensus 604 ~~~~~~~d~Lr~~~~a~~fV~e~~~hgKpIAAIchgp~lL~ 644 (688)
T 3ej6_A 604 FSGKGAMSPLFPAGRPSQILTDGYRWGKPVAAVGSAKKALQ 644 (688)
T ss_dssp TSTTTTCCTTSCTTHHHHHHHHHHHTTCCEEEEGGGHHHHH
T ss_pred cccccchhhhccCHHHHHHHHHHHHcCCEEEEeCccHHHHH
Confidence 2335688899999999999999999999996
No 58
>3gra_A Transcriptional regulator, ARAC family; transcription regulator, PSI-II, structural genomics structure initiative; 2.30A {Pseudomonas putida}
Probab=93.70 E-value=0.082 Score=51.16 Aligned_cols=47 Identities=19% Similarity=0.075 Sum_probs=39.2
Q ss_pred ccCCCEEEECCCCCCCc-chhHHHHHHHHHHcCCCEEEEehhHHHHHH
Q 006689 394 LKGADGILVPGGFGNRG-VQGKILAAKYAREHRIPYLGICLGMQVAVI 440 (635)
Q Consensus 394 L~~~DGIllPGGfG~rg-~eg~i~air~are~~iP~LGICLGmQllai 440 (635)
...+|.|+||||.+... .+..++.++.+.++++++.+||-|-.+|+-
T Consensus 69 ~~~~D~livpGG~~~~~~~~~l~~~l~~~~~~g~~iaaIC~G~~~La~ 116 (202)
T 3gra_A 69 LKELDLLVVCGGLRTPLKYPELDRLLNDCAAHGMALGGLWNGAWFLGR 116 (202)
T ss_dssp GTTCSEEEEECCTTCCSCCTTHHHHHHHHHHHTCEEEEETTHHHHHHH
T ss_pred CCCCCEEEEeCCCchhhccHHHHHHHHHHHhhCCEEEEECHHHHHHHH
Confidence 46789999999976542 167788899988999999999999999863
No 59
>3fse_A Two-domain protein containing DJ-1/THIJ/PFPI-like ferritin-like domains; structural genomics; HET: MSE CSX; 1.90A {Anabaena variabilis atcc 29413}
Probab=93.65 E-value=0.14 Score=54.54 Aligned_cols=102 Identities=15% Similarity=0.208 Sum_probs=61.2
Q ss_pred CccEEEEEeccCCCcch-HHHHHHHHHHccccceeeeEEEEecCCC-CCc-ccc-CCChhhhhHHHHhc--cCCCEEEEC
Q 006689 330 EPVRIAMVGKYTGLSDA-YLSILKALLHASVDLRKKLVIDWIPACD-LED-ATE-KENPDAYKAAWKLL--KGADGILVP 403 (635)
Q Consensus 330 ~~v~IalVGkY~~l~Da-Y~SI~~AL~~ag~~~~vkl~i~wi~s~~-le~-~~~-~~~p~~y~~a~~~L--~~~DGIllP 403 (635)
...+|+++ =|..+.+. .....+.|..+|+++.+. -.+... +.. ... .-.++ ...+.+ ..+|.|+||
T Consensus 9 ~mkkV~IL-l~dgf~~~El~~p~dvL~~Ag~~v~vv----S~~~g~~V~ss~G~~~i~~d---~~l~~v~~~~~DaLiVP 80 (365)
T 3fse_A 9 GKKKVAIL-IEQAVEDTEFIIPCNGLKQAGFEVVVL----GSRMNEKYKGKRGRLSTQAD---GTTTEAIASEFDAVVIP 80 (365)
T ss_dssp --CEEEEE-CCTTBCHHHHHHHHHHHHHTTCEEEEE----ESSSSCCEECTTSCCEECCS---EETTTCCGGGCSEEEEC
T ss_pred CceEEEEE-ECCCCcHHHHHHHHHHHHHCCCEEEEE----ECCCCceeecCCCceEEeCC---CCHhhCCCcCCCEEEEE
Confidence 34578888 36555433 456778999998765441 111110 100 000 00000 001122 368999999
Q ss_pred CCCCCC---cchhHHHHHHHHHHcCCCEEEEehhHHHHH
Q 006689 404 GGFGNR---GVQGKILAAKYAREHRIPYLGICLGMQVAV 439 (635)
Q Consensus 404 GGfG~r---g~eg~i~air~are~~iP~LGICLGmQlla 439 (635)
||.|.. ..+..+..++.+.++++|+.+||-|-.+|+
T Consensus 81 GG~g~~~l~~~~~l~~~Lr~~~~~gk~IaAIC~G~~lLA 119 (365)
T 3fse_A 81 GGMAPDKMRRNPNTVRFVQEAMEQGKLVAAVCHGPQVLI 119 (365)
T ss_dssp CBTHHHHHTTCHHHHHHHHHHHHTTCEEEEETTTHHHHH
T ss_pred CCcchhhccCCHHHHHHHHHHHHCCCEEEEECHHHHHHH
Confidence 998642 335678889999999999999999999986
No 60
>3ttv_A Catalase HPII; heme orientation, oxidoreductase; HET: HEM; 1.45A {Escherichia coli} PDB: 3ttt_A* 1gge_A* 1iph_A* 4ens_A* 3ttu_A* 3p9p_A* 4enq_A* 1p81_A* 3ttx_A* 4enw_A* 3ttw_A* 4ent_A* 1qws_A* 1cf9_A* 1p80_A* 1qf7_A* 4enu_A* 4enp_A* 1gg9_A* 1ggf_A* ...
Probab=92.96 E-value=0.11 Score=60.14 Aligned_cols=102 Identities=17% Similarity=0.075 Sum_probs=61.6
Q ss_pred ccEEEEEeccCCCcc-hHHHHHHHHHHccccceee-eEEEEecCCCCCccccCCChhhhhHHHHhccCCCEEEECCCCCC
Q 006689 331 PVRIAMVGKYTGLSD-AYLSILKALLHASVDLRKK-LVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGN 408 (635)
Q Consensus 331 ~v~IalVGkY~~l~D-aY~SI~~AL~~ag~~~~vk-l~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIllPGGfG~ 408 (635)
+.||+|+= ...+.+ ...+++++|+.+|+.+.+. ....-|.+.. ......|- .+.+ .....+|+|+|||| |.
T Consensus 600 grKVaILl-aDGfEe~El~~pvdaLr~AG~~V~vVS~~~g~V~gs~--G~~V~aD~-t~~~--v~s~~fDALVVPGG-g~ 672 (753)
T 3ttv_A 600 GRVVAILL-NDEVRSADLLAILKALKAKGVHAKLLYSRMGEVTADD--GTVLPIAA-TFAG--APSLTVDAVIVPCG-NI 672 (753)
T ss_dssp TCEEEEEC-CTTCCHHHHHHHHHHHHHHTCEEEEEESSSSEEECTT--SCEEECCE-ETTT--SCGGGCSEEEECCS-CG
T ss_pred CCEEEEEe-cCCCCHHHHHHHHHHHHHCCCEEEEEEcCCCeEEeCC--CCEEeccc-chhh--CCCcCCCEEEECCC-Ch
Confidence 35888872 333332 4678899999999876542 0000111110 00000000 0100 01135899999999 64
Q ss_pred C---cchhHHHHHHHHHHcCCCEEEEehhHHHHH
Q 006689 409 R---GVQGKILAAKYAREHRIPYLGICLGMQVAV 439 (635)
Q Consensus 409 r---g~eg~i~air~are~~iP~LGICLGmQlla 439 (635)
. ..+..+..++.+.++++|+-+||-|-++|+
T Consensus 673 ~~Lr~d~~vl~~Vre~~~~gKpIAAIC~Gp~lLa 706 (753)
T 3ttv_A 673 ADIADNGDANYYLMEAYKHLKPIALAGDARKFKA 706 (753)
T ss_dssp GGTTTCHHHHHHHHHHHHTTCCEEEEGGGGGGGG
T ss_pred HHhhhCHHHHHHHHHHHhcCCeEEEECchHHHHH
Confidence 3 345688899999999999999999999985
No 61
>1rw7_A YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI superfamily, unknown function; 1.80A {Saccharomyces cerevisiae} SCOP: c.23.16.2 PDB: 1qvv_A* 1qvz_A 1qvw_A
Probab=92.80 E-value=0.042 Score=54.66 Aligned_cols=45 Identities=11% Similarity=0.056 Sum_probs=37.7
Q ss_pred cCCCEEEECCCCCC----CcchhHHHHHHHHHHcCCCEEEEehhHHHHH
Q 006689 395 KGADGILVPGGFGN----RGVQGKILAAKYAREHRIPYLGICLGMQVAV 439 (635)
Q Consensus 395 ~~~DGIllPGGfG~----rg~eg~i~air~are~~iP~LGICLGmQlla 439 (635)
.++|+|+||||.|. +..+...+.++.+.++++|+.+||-|-.+|+
T Consensus 97 ~~~D~livpGG~~~~~~l~~~~~l~~~l~~~~~~gk~vaaIC~G~~~La 145 (243)
T 1rw7_A 97 DDYQIFFASAGHGTLFDYPKAKDLQDIASEIYANGGVVAAVCHGPAIFD 145 (243)
T ss_dssp GGEEEEEECCSTTHHHHGGGCHHHHHHHHHHHHTTCEEEEETTGGGGGT
T ss_pred hhCcEEEECCCCCchhhcccCHHHHHHHHHHHHcCCEEEEECCCHHHHH
Confidence 46899999999874 2345678889999999999999999998775
No 62
>3en0_A Cyanophycinase; serine protease, beta peptide specific, hydrolase, protease; 1.50A {Synechocystis SP}
Probab=92.79 E-value=0.18 Score=52.21 Aligned_cols=109 Identities=13% Similarity=0.089 Sum_probs=67.9
Q ss_pred hHHHHHHHHHhcCCCCccEEEEEeccCCC-cchHH-HHHHHHHHcccc-ceeeeEEEEecCCCCCccccCCChhhhhHHH
Q 006689 315 LKEWTSRAEICDGLHEPVRIAMVGKYTGL-SDAYL-SILKALLHASVD-LRKKLVIDWIPACDLEDATEKENPDAYKAAW 391 (635)
Q Consensus 315 l~~W~~lv~~~~~~~~~v~IalVGkY~~l-~DaY~-SI~~AL~~ag~~-~~vkl~i~wi~s~~le~~~~~~~p~~y~~a~ 391 (635)
..-|+.+++.... ...+|++|. +-+. .+.|. ...++|+..|++ +.+ ++-.+.+.. .+| +..
T Consensus 42 ~~i~~~~v~lagg--~~~~I~~Ip-tAs~~~~~~~~~~~~~f~~lG~~~v~~------L~i~~r~~a---~~~----~~~ 105 (291)
T 3en0_A 42 REILQTFWSRSGG--NDAIIGIIP-SASREPLLIGERYQTIFSDMGVKELKV------LDIRDRAQG---DDS----GYR 105 (291)
T ss_dssp CHHHHHHHHHTTG--GGCEEEEEC-TTCSSHHHHHHHHHHHHHHHCCSEEEE------CCCCSGGGG---GCH----HHH
T ss_pred HHHHHHHHHHcCC--CCCeEEEEe-CCCCChHHHHHHHHHHHHHcCCCeeEE------EEecCcccc---CCH----HHH
Confidence 3456677776642 247999994 5332 23443 356778888873 322 222111100 111 233
Q ss_pred HhccCCCEEEECCCCCCC-----cchhHHHHHHHHHHcC-CCEEEEehhHHHHH
Q 006689 392 KLLKGADGILVPGGFGNR-----GVQGKILAAKYAREHR-IPYLGICLGMQVAV 439 (635)
Q Consensus 392 ~~L~~~DGIllPGGfG~r-----g~eg~i~air~are~~-iP~LGICLGmQlla 439 (635)
+.+.++|+|+++||--.+ ...+..++++.+.+++ +|+.|.|-|.-+|+
T Consensus 106 ~~l~~ad~I~v~GGnt~~l~~~l~~t~l~~~L~~~~~~G~~~~~GtSAGA~i~~ 159 (291)
T 3en0_A 106 LFVEQCTGIFMTGGDQLRLCGLLADTPLMDRIRQRVHNGEISLAGTSAGAAVMG 159 (291)
T ss_dssp HHHHHCSEEEECCSCHHHHHHHHTTCHHHHHHHHHHHTTSSEEEEETHHHHTTS
T ss_pred HHHhcCCEEEECCCCHHHHHHHHHhCCHHHHHHHHHHCCCeEEEEeCHHHHhhh
Confidence 567899999999973211 1246788999998999 99999999998885
No 63
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=92.61 E-value=0.056 Score=54.47 Aligned_cols=45 Identities=16% Similarity=0.093 Sum_probs=38.3
Q ss_pred cCCCEEEECCCCCC----CcchhHHHHHHHHHHcCCCEEEEehhHHHHH
Q 006689 395 KGADGILVPGGFGN----RGVQGKILAAKYAREHRIPYLGICLGMQVAV 439 (635)
Q Consensus 395 ~~~DGIllPGGfG~----rg~eg~i~air~are~~iP~LGICLGmQlla 439 (635)
.++|+|+||||.|. +..+.....++.+.++++|+.+||-|-.+|+
T Consensus 104 ~~yD~l~ipGG~g~~~~l~~~~~l~~~l~~~~~~gk~iaaIC~Gp~~La 152 (247)
T 3n7t_A 104 HDYGLMFVCGGHGALYDFPHAKHLQNIAQDIYKRGGVIGAVCHGPAMLP 152 (247)
T ss_dssp GGCSEEEECCSTTHHHHGGGCHHHHHHHHHHHHTTCEEEEETTGGGGGG
T ss_pred hhCCEEEEeCCCchhhhcccCHHHHHHHHHHHHcCCEEEEEChHHHHHH
Confidence 46899999999875 2345678889999999999999999998884
No 64
>3noq_A THIJ/PFPI family protein; DJ-1 superfamily, isocyanide hydratase, isonitrIle hydratase; HET: NHE; 1.00A {Pseudomonas fluorescens} PDB: 3noo_A 3non_A 3nor_A* 3nov_A
Probab=92.43 E-value=0.11 Score=51.36 Aligned_cols=46 Identities=17% Similarity=0.106 Sum_probs=38.7
Q ss_pred ccCCCEEEECCCCCCC---cchhHHHHHHHHHHcCCCEEEEehhHHHHH
Q 006689 394 LKGADGILVPGGFGNR---GVQGKILAAKYAREHRIPYLGICLGMQVAV 439 (635)
Q Consensus 394 L~~~DGIllPGGfG~r---g~eg~i~air~are~~iP~LGICLGmQlla 439 (635)
+..+|.|+||||+|.. ..+..+..++.+.++++++.+||-|-.+|+
T Consensus 63 ~~~~D~livpGG~g~~~~~~~~~l~~~lr~~~~~g~~v~aiC~G~~~La 111 (231)
T 3noq_A 63 CPPLDVICIPGGTGVGALMEDPQALAFIRQQAARARYVTSVSTGSLVLG 111 (231)
T ss_dssp CCCCSEEEECCSTTHHHHTTCHHHHHHHHHHHTTCSEEEEETTHHHHHH
T ss_pred CCcCCEEEECCCCChhhhccCHHHHHHHHHHHhcCCEEEEECHHHHHHH
Confidence 4578999999998753 235678888988899999999999998886
No 65
>2iuf_A Catalase; oxidoreductase; HET: HDD NAG; 1.71A {Penicillium janthinellum} PDB: 2xf2_A*
Probab=92.42 E-value=0.22 Score=57.10 Aligned_cols=96 Identities=13% Similarity=0.078 Sum_probs=61.8
Q ss_pred ccEEEEEec--cCCCcchHHHHHHHHHHccccceeeeEEEEecCCCCCccccCCChhhhhHHHHhccCCCEEEECCCC-C
Q 006689 331 PVRIAMVGK--YTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGF-G 407 (635)
Q Consensus 331 ~v~IalVGk--Y~~l~DaY~SI~~AL~~ag~~~~vkl~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIllPGGf-G 407 (635)
+.||+|+-. -+.-......+.++|+.+|+.+.+. .. .... .. | ..|.+ .....+|+|+||||. |
T Consensus 529 g~kVaIL~a~~dGfe~~E~~~~~~~L~~aG~~V~vV------s~-~~g~-~v--D-~t~~~--~~s~~fDAVvlPGG~~g 595 (688)
T 2iuf_A 529 GLKVGLLASVNKPASIAQGAKLQVALSSVGVDVVVV------AE-RXAN-NV--D-ETYSA--SDAVQFDAVVVADGAEG 595 (688)
T ss_dssp TCEEEEECCTTCHHHHHHHHHHHHHHGGGTCEEEEE------ES-SCCT-TC--C-EESTT--CCGGGCSEEEECTTCGG
T ss_pred CCEEEEEecCCCCCcHHHHHHHHHHHHHCCCEEEEE------ec-cCCc-cc--c-cchhc--CCccccCeEEecCCCcc
Confidence 468998842 1111224678889999999987663 11 1110 00 0 01111 123478999999994 4
Q ss_pred ----------------CC---cchhHHHHHHHHHHcCCCEEEEehhHHHHH
Q 006689 408 ----------------NR---GVQGKILAAKYAREHRIPYLGICLGMQVAV 439 (635)
Q Consensus 408 ----------------~r---g~eg~i~air~are~~iP~LGICLGmQlla 439 (635)
.. .....+..++.+.+.++|+-.||-|-++|.
T Consensus 596 ~~~~~~~~~~~~~~~~~~~L~~~~~~~~~v~~~~~~gKpIaAIc~ap~vL~ 646 (688)
T 2iuf_A 596 LFGADSFTVEPSAGSGASTLYPAGRPLNILLDAFRFGKTVGALGSGSDALE 646 (688)
T ss_dssp GCCTTTTTCCCCTTSCCCSSSCTTHHHHHHHHHHHHTCEEEEEGGGHHHHH
T ss_pred cccccccccccccccchhhcccChHHHHHHHHHHHcCCEEEEECchHHHHH
Confidence 21 235688899999999999999999999885
No 66
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=92.29 E-value=0.063 Score=53.90 Aligned_cols=45 Identities=13% Similarity=0.049 Sum_probs=38.3
Q ss_pred cCCCEEEECCCCCC----CcchhHHHHHHHHHHcCCCEEEEehhHHHHH
Q 006689 395 KGADGILVPGGFGN----RGVQGKILAAKYAREHRIPYLGICLGMQVAV 439 (635)
Q Consensus 395 ~~~DGIllPGGfG~----rg~eg~i~air~are~~iP~LGICLGmQlla 439 (635)
.++|+|+||||.|. +..+.....++.+.++++|+.+||-|-.+|+
T Consensus 97 ~~yD~l~vpGG~~~~~~l~~~~~l~~~l~~~~~~gk~iaaIC~G~~~La 145 (244)
T 3kkl_A 97 SDYKVFFASAGHGALFDYPKAKNLQDIASKIYANGGVIAAICHGPLLFD 145 (244)
T ss_dssp GGCSEEEECCSTTHHHHGGGCHHHHHHHHHHHHTTCEEEEETTGGGGGT
T ss_pred hhCCEEEEcCCCchhhhcccCHHHHHHHHHHHHcCCEEEEECHHHHHHH
Confidence 46899999999875 2345678889999999999999999998885
No 67
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=91.18 E-value=0.25 Score=46.22 Aligned_cols=83 Identities=10% Similarity=0.123 Sum_probs=58.1
Q ss_pred CeEEEEccccccchh------hHHHHHHhcCcCCCCceeEEeccCCccccCCCCCCccCcceEEEccCCccccCCCCccc
Q 006689 36 LQYMFLCLNECACIN------FFSLFLVQNCQYHPNTHFNLFGLDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYE 109 (635)
Q Consensus 36 ~k~i~vtggv~s~lg------s~g~ll~~~~~~~~g~~v~~~K~DpYlN~d~gtmsp~eHGEvfV~~DG~E~DlDlG~Ye 109 (635)
||.|.|+++ -.|.| .|+..|.. +|++|..+..||.-|.-.
T Consensus 1 M~vi~v~s~-kgG~GKTt~a~~la~~la~-----~g~~vlliD~D~~~~~~~---------------------------- 46 (206)
T 4dzz_A 1 MKVISFLNP-KGGSGKTTAVINIATALSR-----SGYNIAVVDTDPQMSLTN---------------------------- 46 (206)
T ss_dssp CEEEEECCS-STTSSHHHHHHHHHHHHHH-----TTCCEEEEECCTTCHHHH----------------------------
T ss_pred CeEEEEEeC-CCCccHHHHHHHHHHHHHH-----CCCeEEEEECCCCCCHHH----------------------------
Confidence 678888865 56777 88889999 999999999997533210
Q ss_pred cccCCCCCCCCcccchHhHHHHHhhhhcCCCCCCeeEEcccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCCcccc
Q 006689 110 RFMDIKLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGD 187 (635)
Q Consensus 110 Rfl~~~l~~~~nittGkiy~~vi~kEr~g~ylG~tvQviPHit~~i~~~i~~~~~~pvd~~~~~~dv~i~EiGGTvGd 187 (635)
|+.. . .. .+.++|--.+.+.+.+.++. ..+|++||+.++..++
T Consensus 47 -~~~~--------------------~-~~-----~~~~~~~~~~~l~~~l~~l~--------~~yD~viiD~~~~~~~ 89 (206)
T 4dzz_A 47 -WSKA--------------------G-KA-----AFDVFTAASEKDVYGIRKDL--------ADYDFAIVDGAGSLSV 89 (206)
T ss_dssp -HHTT--------------------S-CC-----SSEEEECCSHHHHHTHHHHT--------TTSSEEEEECCSSSSH
T ss_pred -HHhc--------------------C-CC-----CCcEEecCcHHHHHHHHHhc--------CCCCEEEEECCCCCCH
Confidence 1000 0 00 04566666688888888875 3699999999998743
No 68
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=90.93 E-value=0.46 Score=47.59 Aligned_cols=163 Identities=12% Similarity=0.111 Sum_probs=86.9
Q ss_pred CCCeEEEEccccccchh------hHHHHHHhcCcCCCCceeEEeccCCccccCCCCCCccCcceEEEccCCccccCCCCc
Q 006689 34 LNLQYMFLCLNECACIN------FFSLFLVQNCQYHPNTHFNLFGLDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGN 107 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg------s~g~ll~~~~~~~~g~~v~~~K~DpYlN~d~gtmsp~eHGEvfV~~DG~E~DlDlG~ 107 (635)
+++|.||||| .=++.| .|.+.|+. +|++|...| | .+.|-. ..+| .|-|...
T Consensus 19 ~m~k~i~Itg-T~t~vGKT~vs~gL~~~L~~-----~G~~V~~fK--P-----------v~~g~~--~~~~--~~~D~~~ 75 (242)
T 3qxc_A 19 FQGHMLFISA-TNTNAGKTTCARLLAQYCNA-----CGVKTILLK--P-----------IETGVN--DAIN--HSSDAHL 75 (242)
T ss_dssp CCCEEEEEEE-SSTTSSHHHHHHHHHHHHHH-----TTCCEEEEC--C-----------EECSCC--TTTC--CCSHHHH
T ss_pred hcCcEEEEEe-CCCCCcHHHHHHHHHHHHHh-----CCCceEEEe--e-----------eecCCc--ccCC--CCchHHH
Confidence 3479999997 457888 67788999 999999988 2 111110 0001 2223333
Q ss_pred c----cccc-CCCCCCCCcccchHhHH----HHHhhhhcCCCCCCeeEEcccchHHHHHHHHHHhcccCCCCCCCCcEEE
Q 006689 108 Y----ERFM-DIKLTRDNNITTGKIYQ----SVIDKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCV 178 (635)
Q Consensus 108 Y----eRfl-~~~l~~~~nittGkiy~----~vi~kEr~g~ylG~tvQviPHit~~i~~~i~~~~~~pvd~~~~~~dv~i 178 (635)
+ .|+. ++.. .++. .-.|. --+..++.|.+ +. ---++|++.++++++ ++|++|
T Consensus 76 ~~~~~~~~~~g~~~---~~~~-p~~~~~p~sp~~aa~~~g~~--~~-----i~~~~I~~~~~~l~~--------~~D~vl 136 (242)
T 3qxc_A 76 FLQDNRLLDRSLTL---KDIS-FYRYHKVSAPLIAQQEEDPN--AP-----IDTDNLTQRLHNFTK--------TYDLVI 136 (242)
T ss_dssp HHHHHHTTCTTCCH---HHHC-CEECSSSSCHHHHHHHHCTT--CC-----CCHHHHHHHHHHGGG--------TCSEEE
T ss_pred HHHHHHHHhCCCCh---HHee-eEEECCCCChHHHHHHcCCC--Cc-----CCHHHHHHHHHHHHh--------cCCEEE
Confidence 3 3333 2221 0000 01110 11222333332 11 134788888888863 689999
Q ss_pred EeeCCccccc--CcchHHHHHHHhhhhcCCCCEEEEeeeeeeeecCC-CccccCCccchhhhhhcCCCcccEEEEeeC
Q 006689 179 IELGGTIGDI--ESMPFIEALGQFSYRVGPGNFCLIHVSLVPVLNVV-GEQKTKPTQHSVRGLRGQGLTPNILACRST 253 (635)
Q Consensus 179 ~EiGGTvGdi--es~pf~ea~rq~~~~~g~~n~~~ihv~~vp~~~~~-~e~KtKptQ~svk~Lrs~Gi~pd~iv~R~~ 253 (635)
||==|-+.+. +..-..+-++++... + |.+.... |- -.-|.-+++.|+..|+. .++|+-..
T Consensus 137 IEGagGl~~pl~~~~~~adlA~~l~~p-----V-------ILV~~~~lg~--i~~~~lt~~~l~~~g~~-~GvIlN~v 199 (242)
T 3qxc_A 137 VEGAGGLCVPITLEENMLDFALKLKAK-----M-------LLISHDNLGL--INDCLLNDFLLKSHQLD-YKIAINLK 199 (242)
T ss_dssp EECCSCTTCBSSSSCBHHHHHHHHTCE-----E-------EEEECCSTTH--HHHHHHHHHHHHTSSSC-EEEEECCC
T ss_pred EECCCCccccccccchHHHHHHHcCCC-----E-------EEEEcCCCcH--HHHHHHHHHHHHhCCCC-EEEEEeCC
Confidence 9965545442 334445666666432 1 2222211 21 12355667788899999 99888543
No 69
>3mgk_A Intracellular protease/amidase related enzyme (THIJ family); amidotranferase-like, structural genomics, PSI; 2.00A {Clostridium acetobutylicum}
Probab=90.78 E-value=0.11 Score=50.72 Aligned_cols=45 Identities=20% Similarity=0.262 Sum_probs=37.3
Q ss_pred cCCCEEEECCCCCCC---cchhHHHHHHHHHHcCCCEEEEehhHHHHH
Q 006689 395 KGADGILVPGGFGNR---GVQGKILAAKYAREHRIPYLGICLGMQVAV 439 (635)
Q Consensus 395 ~~~DGIllPGGfG~r---g~eg~i~air~are~~iP~LGICLGmQlla 439 (635)
..+|.|+||||.|.. ..+..++.++.+.++++++.+||-|-.+|+
T Consensus 64 ~~~D~livpGG~~~~~~~~~~~~~~~l~~~~~~~k~iaaiC~G~~~La 111 (211)
T 3mgk_A 64 NIEKILFVPGGSGTREKVNDDNFINFIGNMVKESKYIISVCTGSALLS 111 (211)
T ss_dssp SSEEEEEECCSTHHHHHTTCHHHHHHHHHHHHHCSEEEECTTHHHHHH
T ss_pred CCCCEEEECCCcchhhhcCCHHHHHHHHHHHHcCCEEEEEchHHHHHH
Confidence 357999999998653 234578888888889999999999999886
No 70
>1n57_A Chaperone HSP31, protein YEDU; alpha-beta sandwich; 1.60A {Escherichia coli} SCOP: c.23.16.2 PDB: 1pv2_A 1izy_A 1ons_A 1izz_A
Probab=90.33 E-value=0.11 Score=53.46 Aligned_cols=46 Identities=26% Similarity=0.385 Sum_probs=38.5
Q ss_pred ccCCCEEEECCCCCCC-c---chhHHHHHHHHHHcCCCEEEEehhHHHHH
Q 006689 394 LKGADGILVPGGFGNR-G---VQGKILAAKYAREHRIPYLGICLGMQVAV 439 (635)
Q Consensus 394 L~~~DGIllPGGfG~r-g---~eg~i~air~are~~iP~LGICLGmQlla 439 (635)
..++|+||||||.|.. . .+..++.++++.++++|+.+||-|-.+|+
T Consensus 143 ~~~yD~livPGG~g~~~~l~~~~~l~~~l~~~~~~gk~VaaIC~Gp~~La 192 (291)
T 1n57_A 143 DSEYAAIFVPGGHGALIGLPESQDVAAALQWAIKNDRFVISLCHGPAAFL 192 (291)
T ss_dssp TCSEEEEEECCSGGGGSSGGGCHHHHHHHHHHHHTTCEEEEETTGGGGGG
T ss_pred cccCCEEEecCCcchhhhhhhCHHHHHHHHHHHHcCCEEEEECccHHHHH
Confidence 4678999999998764 2 35678889999999999999999998764
No 71
>3uk7_A Class I glutamine amidotransferase-like domain-CO protein; rossmann fold, cytosol; 2.05A {Arabidopsis thaliana}
Probab=90.06 E-value=0.21 Score=52.86 Aligned_cols=46 Identities=22% Similarity=0.340 Sum_probs=38.5
Q ss_pred cCCCEEEECCCCCCC---cchhHHHHHHHHHHcCCCEEEEehhHHHHHH
Q 006689 395 KGADGILVPGGFGNR---GVQGKILAAKYAREHRIPYLGICLGMQVAVI 440 (635)
Q Consensus 395 ~~~DGIllPGGfG~r---g~eg~i~air~are~~iP~LGICLGmQllai 440 (635)
..+|.|+||||.|.. ..+..+..++.+.++++|+.+||-|-++|+-
T Consensus 88 ~~~D~livpGG~~~~~~~~~~~~~~~l~~~~~~~~~i~aiC~G~~~La~ 136 (396)
T 3uk7_A 88 SKYDGLVIPGGRAPEYLALTASVVELVKEFSRSGKPIASICHGQLILAA 136 (396)
T ss_dssp GGCSEEEECCBSHHHHHTTCHHHHHHHHHHHHTTCCEEEETTTHHHHHH
T ss_pred ccCCEEEECCCcchhhcccCHHHHHHHHHHHHcCCEEEEECchHHHHHh
Confidence 578999999997642 2356788889999999999999999999873
No 72
>4gdh_A DJ-1, uncharacterized protein C22E12.03C; unknown function, cysteine oxidation; 1.05A {Schizosaccharomyces pombe} PDB: 4ge3_A 4ge0_A
Probab=89.85 E-value=0.28 Score=47.09 Aligned_cols=103 Identities=15% Similarity=0.074 Sum_probs=53.9
Q ss_pred ccEEEEEeccCCCcch-HHHHHHHHHHccccceeeeEEEEecCCCC---Cc-cc--cCCC--hhhhhHHHHhccCCCEEE
Q 006689 331 PVRIAMVGKYTGLSDA-YLSILKALLHASVDLRKKLVIDWIPACDL---ED-AT--EKEN--PDAYKAAWKLLKGADGIL 401 (635)
Q Consensus 331 ~v~IalVGkY~~l~Da-Y~SI~~AL~~ag~~~~vkl~i~wi~s~~l---e~-~~--~~~~--p~~y~~a~~~L~~~DGIl 401 (635)
..||+++ =+..+.+. .....+.|+.+|+++.+. .+....- .. .. ...| .+....+.....++|+|+
T Consensus 4 M~kV~il-l~dGfe~~E~~~p~~vl~~ag~~v~~~----s~~~~~~~~v~~~~g~~v~~d~~~~~~~~~d~~~~~yD~lv 78 (194)
T 4gdh_A 4 MVKVCLF-VADGTDEIEFSAPWGIFKRAEIPIDSV----YVGENKDRLVKMSRDVEMYANRSYKEIPSADDFAKQYDIAI 78 (194)
T ss_dssp -CCEEEE-EETTCCHHHHHHHHHHHHHTTCCEEEE----EESSCTTCEEECTTSCEEECSEEGGGSCCHHHHHHHCSEEE
T ss_pred CCEEEEE-ECCCcCHHHHHHHHHHHHHCCCeEEEE----EEcCCCCceEecCCCceeeccccHhhCCccccccccCCEEE
Confidence 3467776 34444433 345678899999876542 1211110 00 00 0000 000000112245689999
Q ss_pred ECCCCC-CC---cchhHHHHHHHHHH-cCCCEEEEehhHHHH
Q 006689 402 VPGGFG-NR---GVQGKILAAKYARE-HRIPYLGICLGMQVA 438 (635)
Q Consensus 402 lPGGfG-~r---g~eg~i~air~are-~~iP~LGICLGmQll 438 (635)
||||.+ .. ..+..++.++.+.+ .++|+-.||-|..++
T Consensus 79 vPGG~~~~~~l~~~~~l~~~l~~~~~~~~k~iaaiC~g~~l~ 120 (194)
T 4gdh_A 79 IPGGGLGAKTLSTTPFVQQVVKEFYKKPNKWIGMICAGTLTA 120 (194)
T ss_dssp ECCCHHHHHHHHTCHHHHHHHHHHTTCTTCEEEEEGGGGHHH
T ss_pred ECCCchhHhHhhhCHHHHHHHHHhhhcCCceEEeecccccch
Confidence 999954 22 23456677776543 478999999997443
No 73
>3ot1_A 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme; csgid, structural genomics; HET: MSE CSX; 1.16A {Vibrio cholerae o1 biovar el tor} SCOP: c.23.16.0
Probab=89.81 E-value=0.096 Score=50.76 Aligned_cols=98 Identities=14% Similarity=0.183 Sum_probs=59.6
Q ss_pred cEEEEEeccCCCcc-hHHHHHHHHHHccccceeeeEEEEecC-CCCCc-c--ccCCChhhhhHHHHhc--cCCCEEEECC
Q 006689 332 VRIAMVGKYTGLSD-AYLSILKALLHASVDLRKKLVIDWIPA-CDLED-A--TEKENPDAYKAAWKLL--KGADGILVPG 404 (635)
Q Consensus 332 v~IalVGkY~~l~D-aY~SI~~AL~~ag~~~~vkl~i~wi~s-~~le~-~--~~~~~p~~y~~a~~~L--~~~DGIllPG 404 (635)
.||+++ =+..+.+ ......+.|+.+++++.+. -.+. ..+.. . ....+. ..+.+ ..+|.|+|||
T Consensus 10 ~~v~il-l~~g~~~~e~~~~~~~l~~ag~~v~~v----s~~g~~~v~~~~G~~v~~d~-----~l~~~~~~~~D~livpG 79 (208)
T 3ot1_A 10 KRILVP-VAHGSEEMETVIIVDTLVRAGFQVTMA----AVGDKLQVQGSRGVWLTAEQ-----TLEACSAEAFDALALPG 79 (208)
T ss_dssp CEEEEE-ECTTCCHHHHHHHHHHHHHTTCEEEEE----ESSSCSEEECTTSCEEECSE-----EGGGCCGGGCSEEEECC
T ss_pred CeEEEE-ECCCCcHHHHHHHHHHHHHCCCEEEEE----EcCCCcceecCCCcEEeCCC-----CHHHCCCcCCCEEEECC
Confidence 478877 3544432 3556778999998765442 1110 00100 0 000000 01222 4789999999
Q ss_pred CCCC-C---cchhHHHHHHHHHHcCCCEEEEehhH-HHHH
Q 006689 405 GFGN-R---GVQGKILAAKYAREHRIPYLGICLGM-QVAV 439 (635)
Q Consensus 405 GfG~-r---g~eg~i~air~are~~iP~LGICLGm-Qlla 439 (635)
|.+. . ..+..++.++.+.++++|+.+||-|- .+|+
T Consensus 80 G~~~~~~l~~~~~l~~~l~~~~~~gk~i~aiC~G~a~~La 119 (208)
T 3ot1_A 80 GVGGAQAFADSTALLALIDAFSQQGKLVAAICATPALVFA 119 (208)
T ss_dssp CHHHHHHHHTCHHHHHHHHHHHHTTCEEEEETTHHHHTTT
T ss_pred CchHHHHHhhCHHHHHHHHHHHHcCCEEEEEChhHHHHHH
Confidence 9742 1 23567888999999999999999998 7775
No 74
>3ewn_A THIJ/PFPI family protein; monomer, PSI nysgrc, structural genomics, protein structure initiative; 1.65A {Pseudomonas syringae PV}
Probab=89.07 E-value=0.25 Score=49.79 Aligned_cols=44 Identities=14% Similarity=0.171 Sum_probs=36.8
Q ss_pred CCCEEEECCCC-CCC---cchhHHHHHHHHHHcCCCEEEEehhHHHHH
Q 006689 396 GADGILVPGGF-GNR---GVQGKILAAKYAREHRIPYLGICLGMQVAV 439 (635)
Q Consensus 396 ~~DGIllPGGf-G~r---g~eg~i~air~are~~iP~LGICLGmQlla 439 (635)
.+|.|+||||. |.. ..+..+..++.+.++++++.+||-|-.+|+
T Consensus 84 ~yD~liVPGG~~g~~~l~~~~~l~~~Lr~~~~~gk~IaaICtG~~lLa 131 (253)
T 3ewn_A 84 DLTVLFAPGGTDGTLAAASDAETLAFMADRGARAKYITSVCSGSLILG 131 (253)
T ss_dssp SCSEEEECCBSHHHHHHTTCHHHHHHHHHHHTTCSEEEEETTHHHHHH
T ss_pred CCCEEEECCCccchhhhccCHHHHHHHHHHHHcCCEEEEEChHHHHHH
Confidence 46999999998 642 345678888988899999999999998886
No 75
>1sy7_A Catalase 1; heme oxidation, singlet oxygen, oxidoreductase; HET: HDD HEM; 1.75A {Neurospora crassa} SCOP: c.23.16.3
Probab=88.43 E-value=0.65 Score=53.62 Aligned_cols=100 Identities=14% Similarity=0.060 Sum_probs=60.9
Q ss_pred cEEEEEeccCCCcc-hHHHHHHHHHHccccceeeeEEEEecCCCCCc---cccCCChhhhhHHHHh--ccCCCEEEECCC
Q 006689 332 VRIAMVGKYTGLSD-AYLSILKALLHASVDLRKKLVIDWIPACDLED---ATEKENPDAYKAAWKL--LKGADGILVPGG 405 (635)
Q Consensus 332 v~IalVGkY~~l~D-aY~SI~~AL~~ag~~~~vkl~i~wi~s~~le~---~~~~~~p~~y~~a~~~--L~~~DGIllPGG 405 (635)
.+|+|+ =+..+.+ ......++|+.+|+++.+. ......+.. .....+. .+ +. ...+|+|+||||
T Consensus 535 rkVaIL-l~dGfe~~El~~p~dvL~~AG~~V~iv----S~~gg~V~ss~G~~v~~d~-~l----~~v~~~~yDaViVPGG 604 (715)
T 1sy7_A 535 RRVAII-IADGYDNVAYDAAYAAISANQAIPLVI----GPRRSKVTAANGSTVQPHH-HL----EGFRSTMVDAIFIPGG 604 (715)
T ss_dssp CEEEEE-CCTTBCHHHHHHHHHHHHHTTCEEEEE----ESCSSCEEBTTSCEECCSE-ET----TTCCGGGSSEEEECCC
T ss_pred CEEEEE-EcCCCCHHHHHHHHHHHHhcCCEEEEE----ECCCCceecCCCceEeccc-cc----ccCCcccCCEEEEcCC
Confidence 589988 3543432 2456788999998776542 211111100 0000000 00 11 246899999999
Q ss_pred CCCC----cchhHHHHHHHHHHcCCCEEEEehhHHHHHHH
Q 006689 406 FGNR----GVQGKILAAKYAREHRIPYLGICLGMQVAVIE 441 (635)
Q Consensus 406 fG~r----g~eg~i~air~are~~iP~LGICLGmQllaie 441 (635)
.+.. .....+..++.+.++++|+.+||-|-.+|+-+
T Consensus 605 ~~~~~~l~~~~~l~~~Lr~~~~~gK~IaAIC~G~~lLA~A 644 (715)
T 1sy7_A 605 AKAAETLSKNGRALHWIREAFGHLKAIGATGEAVDLVAKA 644 (715)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHTTCEEEEETTHHHHHHHH
T ss_pred cccHhhhccCHHHHHHHHHHHhCCCEEEEECHHHHHHHHc
Confidence 5321 23457888999999999999999999999744
No 76
>2xxa_A Signal recognition particle protein; protein transport, RNA/RNA binding protein, hydrolase, gtpas; HET: GCP; 3.94A {Escherichia coli} PDB: 2j28_9
Probab=84.26 E-value=7.2 Score=42.16 Aligned_cols=38 Identities=11% Similarity=0.061 Sum_probs=31.5
Q ss_pred CCCeEEEEccccccchh------hHHHHHHhcCcCCC-CceeEEeccCCccc
Q 006689 34 LNLQYMFLCLNECACIN------FFSLFLVQNCQYHP-NTHFNLFGLDPYLN 78 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg------s~g~ll~~~~~~~~-g~~v~~~K~DpYlN 78 (635)
.+.+.|.++| .+|.| .|+..|+. + |++|..+..|||-+
T Consensus 98 ~~~~vI~ivG--~~GvGKTT~a~~LA~~l~~-----~~G~kVllvd~D~~r~ 142 (433)
T 2xxa_A 98 QPPAVVLMAG--LQGAGKTTSVGKLGKFLRE-----KHKKKVLVVSADVYRP 142 (433)
T ss_dssp SSSEEEEEEC--STTSSHHHHHHHHHHHHHH-----TSCCCEEEEECCCSST
T ss_pred CCCeEEEEEC--CCCCCHHHHHHHHHHHHHH-----hcCCeEEEEecCCCCc
Confidence 3468888885 49999 77888888 8 99999999999853
No 77
>1hyq_A MIND, cell division inhibitor (MIND-1); MINC, FTSZ, bacterial cell division, cell cycle; 2.60A {Archaeoglobus fulgidus} SCOP: c.37.1.10
Probab=83.33 E-value=3.6 Score=40.02 Aligned_cols=35 Identities=9% Similarity=0.042 Sum_probs=29.4
Q ss_pred CeEEEEccccccchh------hHHHHHHhcCcCCCCceeEEeccCCc
Q 006689 36 LQYMFLCLNECACIN------FFSLFLVQNCQYHPNTHFNLFGLDPY 76 (635)
Q Consensus 36 ~k~i~vtggv~s~lg------s~g~ll~~~~~~~~g~~v~~~K~DpY 76 (635)
+|.|.|+++ -.|.| .|+..|.. +|++|..+..||.
T Consensus 2 ~~~I~v~s~-kgGvGKTt~a~~LA~~la~-----~g~~VlliD~D~~ 42 (263)
T 1hyq_A 2 VRTITVASG-KGGTGKTTITANLGVALAQ-----LGHDVTIVDADIT 42 (263)
T ss_dssp CEEEEEEES-SSCSCHHHHHHHHHHHHHH-----TTCCEEEEECCCS
T ss_pred CeEEEEECC-CCCCCHHHHHHHHHHHHHh-----CCCcEEEEECCCC
Confidence 688888875 46777 88888988 9999999999985
No 78
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=83.12 E-value=1.3 Score=43.62 Aligned_cols=163 Identities=12% Similarity=0.079 Sum_probs=83.3
Q ss_pred CCeEEEEccccccchh------hHHHHHHhcCcCCCCceeEEeccCCccccCCCCCCccCcceEEEccCCccccCCCCcc
Q 006689 35 NLQYMFLCLNECACIN------FFSLFLVQNCQYHPNTHFNLFGLDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNY 108 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg------s~g~ll~~~~~~~~g~~v~~~K~DpYlN~d~gtmsp~eHGEvfV~~DG~E~DlDlG~Y 108 (635)
+||-||||| .=|+.| .|.+.|+. +|++|...| |.++|-.+ .+|| ..|-|.-.
T Consensus 3 ~mk~i~Itg-t~t~vGKT~vt~~L~~~l~~-----~G~~V~~~K-------------Pv~~g~~~-~~~~-~~~~D~~~- 60 (228)
T 3of5_A 3 AMKKFFIIG-TDTEVGKTYISTKLIEVCEH-----QNIKSLCLK-------------PVASGQSQ-FSEL-CEDVESIL- 60 (228)
T ss_dssp TCEEEEEEE-SSSSSCHHHHHHHHHHHHHH-----TTCCEEEEC-------------SEEESBCS-SSSS-BHHHHHHH-
T ss_pred CCcEEEEEe-CCCCCCHHHHHHHHHHHHHH-----CCCeeEEec-------------ceeecCcc-CCCC-CChHHHHH-
Confidence 579999996 457888 67788999 999999866 44555322 1222 21122211
Q ss_pred ccccCCCCCCCCcccchHhH----HHHHhhhhcCCCCCCeeEEcccchHHHHHHHHH-HhcccCCCCCCCCcEEEEeeCC
Q 006689 109 ERFMDIKLTRDNNITTGKIY----QSVIDKERKGDYLGKTVQVVPHITDEIQDWIER-VAMIPVDGKEGPVDVCVIELGG 183 (635)
Q Consensus 109 eRfl~~~l~~~~nittGkiy----~~vi~kEr~g~ylG~tvQviPHit~~i~~~i~~-~~~~pvd~~~~~~dv~i~EiGG 183 (635)
+..+..++.++ + ..-.| +--+..++.|. +---++|++.+++ ++ .++|+||||--|
T Consensus 61 -~~~~~~~~~~~-~-~~~~~~~p~sp~~aa~~~~~---------~i~~~~i~~~~~~~l~--------~~~D~vlIEgag 120 (228)
T 3of5_A 61 -NAYKHKFTAAE-I-NLISFNQAVAPHIIAAKTKV---------DISIENLKQFIEDKYN--------QDLDILFIEGAG 120 (228)
T ss_dssp -HHTTTSSCHHH-H-CSEEESSSSCHHHHHHHTTC---------CCCHHHHHHHHHGGGG--------SSCSEEEEEEEE
T ss_pred -HhcCCCCChhh-E-EEEEECCCCCHHHHHHHcCC---------CCCHHHHHHHHHHHHH--------ccCCEEEEECCC
Confidence 22222211100 0 00000 00111122221 1123678888887 64 378999999544
Q ss_pred cccc--cCcchHHHHHHHhhhhcCCCCEEEEeeeeeeeecCCCccccCCccchhhhhhcCCCcccEEEEee
Q 006689 184 TIGD--IESMPFIEALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRS 252 (635)
Q Consensus 184 TvGd--ies~pf~ea~rq~~~~~g~~n~~~ihv~~vp~~~~~~e~KtKptQ~svk~Lrs~Gi~pd~iv~R~ 252 (635)
-+.+ -+..-..+-++++... +++ +... +-..-.-+..+++.|+..|+...++|+-.
T Consensus 121 gl~~p~~~~~~~adla~~l~~p-----viL-------V~~~-~~~~i~~~~~~~~~l~~~~~~i~GvIlN~ 178 (228)
T 3of5_A 121 GLLTPYSDHTTQLDLIKALQIP-----VLL-------VSAI-KVGCINHTLLTINELNRHNIKLAGWIANC 178 (228)
T ss_dssp ETTCBSSSSCBHHHHHHHHTCC-----EEE-------EEEC-STTHHHHHHHHHHHHHHTTCCEEEEEEEE
T ss_pred ccccccccchhHHHHHHHcCCC-----EEE-------EEcC-CcchHHHHHHHHHHHHhCCCcEEEEEEEC
Confidence 3332 1233445555555321 211 1211 11111234556777889999998888854
No 79
>1xjc_A MOBB protein homolog; structural genomics, midwest center for structural GEN PSI, protein structure initiative, MCSG; 2.10A {Geobacillus stearothermophilus} SCOP: c.37.1.10
Probab=82.91 E-value=0.85 Score=43.33 Aligned_cols=39 Identities=3% Similarity=-0.185 Sum_probs=28.5
Q ss_pred CCeEEEEccccccchh------hHHHHHHhcCcCCCCceeEEeccCCc-cccC
Q 006689 35 NLQYMFLCLNECACIN------FFSLFLVQNCQYHPNTHFNLFGLDPY-LNTD 80 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg------s~g~ll~~~~~~~~g~~v~~~K~DpY-lN~d 80 (635)
+|+.|.++| .||-| .|...|+. +|++|..+|.||. .++|
T Consensus 3 ~~~~i~i~G--~sGsGKTTl~~~L~~~l~~-----~g~~v~~ik~~~~~~diD 48 (169)
T 1xjc_A 3 AMNVWQVVG--YKHSGKTTLMEKWVAAAVR-----EGWRVGTVKHHGHGGEPA 48 (169)
T ss_dssp -CCEEEEEC--CTTSSHHHHHHHHHHHHHH-----TTCCEEEEECCC------
T ss_pred CCEEEEEEC--CCCCCHHHHHHHHHHhhHh-----cCCeeeEEEeCCCCcccc
Confidence 478899999 67888 56677778 9999999999997 5666
No 80
>1z0s_A Probable inorganic polyphosphate/ATP-NAD kinase; ATP-binding, structural genomics, NADP, PSI, protein structure initiative; HET: ATP; 1.70A {Archaeoglobus fulgidus} SCOP: e.52.1.1 PDB: 1z0u_A* 1z0z_A* 1suw_A*
Probab=80.59 E-value=1.1 Score=46.18 Aligned_cols=72 Identities=26% Similarity=0.233 Sum_probs=49.8
Q ss_pred ccEEEEEeccCCCcchHHHHHHHHHHccccceeeeEEEEecCCCCCccccCCChhhhhHHHHhccCCCEEEECCCCCCCc
Q 006689 331 PVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRG 410 (635)
Q Consensus 331 ~v~IalVGkY~~l~DaY~SI~~AL~~ag~~~~vkl~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIllPGGfG~rg 410 (635)
.+||+++++...- ...+.+.|+..|+++.+ +...- +.+.++|.|++-||=|.
T Consensus 29 ~mki~iv~~~~~~---~~~l~~~L~~~g~~v~~-------~~~~~----------------~~~~~~DlvIvlGGDGT-- 80 (278)
T 1z0s_A 29 GMRAAVVYKTDGH---VKRIEEALKRLEVEVEL-------FNQPS----------------EELENFDFIVSVGGDGT-- 80 (278)
T ss_dssp -CEEEEEESSSTT---HHHHHHHHHHTTCEEEE-------ESSCC----------------GGGGGSSEEEEEECHHH--
T ss_pred ceEEEEEeCCcHH---HHHHHHHHHHCCCEEEE-------ccccc----------------cccCCCCEEEEECCCHH--
Confidence 4789999875532 56788889999887543 11110 23467899999998332
Q ss_pred chhHHHHHHHHHHcCCCEEEEehh
Q 006689 411 VQGKILAAKYAREHRIPYLGICLG 434 (635)
Q Consensus 411 ~eg~i~air~are~~iP~LGICLG 434 (635)
++.+++.+... +|++||=+|
T Consensus 81 ---~L~aa~~~~~~-~PilGIN~G 100 (278)
T 1z0s_A 81 ---ILRILQKLKRC-PPIFGINTG 100 (278)
T ss_dssp ---HHHHHTTCSSC-CCEEEEECS
T ss_pred ---HHHHHHHhCCC-CcEEEECCC
Confidence 55777776555 999999887
No 81
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=80.52 E-value=2.1 Score=43.08 Aligned_cols=33 Identities=3% Similarity=-0.027 Sum_probs=27.4
Q ss_pred CCCeEEEEccccccchh------hHHHHHHhcCcCCCCceeEEec
Q 006689 34 LNLQYMFLCLNECACIN------FFSLFLVQNCQYHPNTHFNLFG 72 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg------s~g~ll~~~~~~~~g~~v~~~K 72 (635)
..||-||||| .=|+.| .|.+.|+. +|++|...|
T Consensus 24 ~~m~~i~Itg-t~t~vGKT~vt~gL~~~l~~-----~G~~V~~fK 62 (251)
T 3fgn_A 24 SHMTILVVTG-TGTGVGKTVVCAALASAARQ-----AGIDVAVCK 62 (251)
T ss_dssp SSCEEEEEEE-SSTTSCHHHHHHHHHHHHHH-----TTCCEEEEE
T ss_pred cCCCEEEEEe-CCCCCcHHHHHHHHHHHHHH-----CCCeEEEEe
Confidence 4579999986 457888 66788999 999999988
No 82
>3ea0_A ATPase, para family; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: ATP; 2.20A {Chlorobium tepidum}
Probab=78.72 E-value=3 Score=39.96 Aligned_cols=36 Identities=11% Similarity=-0.018 Sum_probs=30.4
Q ss_pred CCeEEEEccccccchh------hHHHHHHhcCcCCC-CceeEEeccCCc
Q 006689 35 NLQYMFLCLNECACIN------FFSLFLVQNCQYHP-NTHFNLFGLDPY 76 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg------s~g~ll~~~~~~~~-g~~v~~~K~DpY 76 (635)
++|.|.|+++ -.|.| .|+..|.. + |++|-.+..||.
T Consensus 3 ~~~vI~v~s~-kGGvGKTt~a~~LA~~la~-----~~g~~VlliD~D~~ 45 (245)
T 3ea0_A 3 AKRVFGFVSA-KGGDGGSCIAANFAFALSQ-----EPDIHVLAVDISLP 45 (245)
T ss_dssp CCEEEEEEES-STTSSHHHHHHHHHHHHTT-----STTCCEEEEECCTT
T ss_pred CCeEEEEECC-CCCcchHHHHHHHHHHHHh-----CcCCCEEEEECCCC
Confidence 4788988876 57778 78888888 7 999999999997
No 83
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=78.07 E-value=20 Score=38.95 Aligned_cols=36 Identities=3% Similarity=0.026 Sum_probs=30.0
Q ss_pred CCeEEEEccccccchh------hHHHHHHhcCcCCCCceeEEeccCCcc
Q 006689 35 NLQYMFLCLNECACIN------FFSLFLVQNCQYHPNTHFNLFGLDPYL 77 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg------s~g~ll~~~~~~~~g~~v~~~K~DpYl 77 (635)
+.+.|.++|- +|.| .|+..|+. +|++|..+..|||-
T Consensus 99 ~p~vIlivG~--~G~GKTTt~~kLA~~l~~-----~G~kVllv~~D~~R 140 (443)
T 3dm5_A 99 KPTILLMVGI--QGSGKTTTVAKLARYFQK-----RGYKVGVVCSDTWR 140 (443)
T ss_dssp SSEEEEEECC--TTSSHHHHHHHHHHHHHT-----TTCCEEEEECCCSS
T ss_pred CCeEEEEECc--CCCCHHHHHHHHHHHHHH-----CCCeEEEEeCCCcc
Confidence 3578888885 9999 67777888 99999999999973
No 84
>3bhn_A THIJ/PFPI domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.76A {Shewanella loihica pv-4}
Probab=73.82 E-value=0.83 Score=45.48 Aligned_cols=44 Identities=23% Similarity=0.206 Sum_probs=31.3
Q ss_pred ccCCCEEEECCC-CCCCc---chhHHHHHHHHHHcCC-CEEEEehhHHHHH
Q 006689 394 LKGADGILVPGG-FGNRG---VQGKILAAKYAREHRI-PYLGICLGMQVAV 439 (635)
Q Consensus 394 L~~~DGIllPGG-fG~rg---~eg~i~air~are~~i-P~LGICLGmQlla 439 (635)
...+|.|+|||| +|.+. .+..+..+ ..+++. ++.+||-|-.+|+
T Consensus 78 ~~~~D~liVPGG~~g~~~l~~~~~l~~~L--~~~~~~~~IaaIC~G~~lLa 126 (236)
T 3bhn_A 78 VKEQDVVLITSGYRGIPAALQDENFMSAL--KLDPSRQLIGSICAGSFVLH 126 (236)
T ss_dssp GGGCSEEEECCCTTHHHHHHTCHHHHHHC--CCCTTTCEEEEETTHHHHHH
T ss_pred ccCCCEEEEcCCccCHhhhccCHHHHHHH--HhCCCCCEEEEEcHHHHHHH
Confidence 567899999999 56532 23345555 233455 9999999999886
No 85
>3kl4_A SRP54, signal recognition 54 kDa protein; signal recognition particle, SRP, SRP54, FFH, signal sequenc peptide; 3.50A {Sulfolobus solfataricus} PDB: 1qzx_A 1qzw_A
Probab=72.76 E-value=27 Score=37.77 Aligned_cols=35 Identities=14% Similarity=0.085 Sum_probs=29.9
Q ss_pred CCeEEEEccccccchh------hHHHHHHhcCcCCCCceeEEeccCCc
Q 006689 35 NLQYMFLCLNECACIN------FFSLFLVQNCQYHPNTHFNLFGLDPY 76 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg------s~g~ll~~~~~~~~g~~v~~~K~DpY 76 (635)
+.+.|.++|. +|.| .|+..|+. +|.+|..+-.|+|
T Consensus 96 ~~~vI~lvG~--~GsGKTTt~~kLA~~l~~-----~G~kVllv~~D~~ 136 (433)
T 3kl4_A 96 LPFIIMLVGV--QGSGKTTTAGKLAYFYKK-----RGYKVGLVAADVY 136 (433)
T ss_dssp SSEEEEECCC--TTSCHHHHHHHHHHHHHH-----TTCCEEEEEECCS
T ss_pred CCeEEEEECC--CCCCHHHHHHHHHHHHHH-----cCCeEEEEecCcc
Confidence 3678889975 7888 78888899 9999999999976
No 86
>3pfn_A NAD kinase; structural genomics consortium, SNP, SGC, transferase; 2.70A {Homo sapiens}
Probab=72.42 E-value=3.6 Score=43.80 Aligned_cols=94 Identities=15% Similarity=0.181 Sum_probs=53.8
Q ss_pred cEEEEEeccCC--CcchHHHHHHHHHHccccceeeeEEEEecCCCCCccccCCChh---h---hh-HHHHhccCCCEEEE
Q 006689 332 VRIAMVGKYTG--LSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPD---A---YK-AAWKLLKGADGILV 402 (635)
Q Consensus 332 v~IalVGkY~~--l~DaY~SI~~AL~~ag~~~~vkl~i~wi~s~~le~~~~~~~p~---~---y~-~a~~~L~~~DGIll 402 (635)
-+|+||+|+.+ .......+.+.|...++.+-+. -. -++++.-.....-+. . +. ...+.-..+|-||.
T Consensus 39 k~I~iv~K~~~~~~~~~~~~l~~~L~~~~~~V~ve--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DlvI~ 114 (365)
T 3pfn_A 39 KSVLVIKKMRDASLLQPFKELCTHLMEENMIVYVE--KK--VLEDPAIASDESFGAVKKKFCTFREDYDDISNQIDFIIC 114 (365)
T ss_dssp CEEEEEECTTCGGGHHHHHHHHHHHHHTSCEEEEE--HH--HHHSHHHHHCSTTHHHHHHCEEECTTTCCCTTTCSEEEE
T ss_pred CEEEEEecCCCHHHHHHHHHHHHHHHHCCCEEEEe--hH--HhhhhccccccccccccccccccccChhhcccCCCEEEE
Confidence 48999999864 2344677788898887664331 00 001100000000000 0 00 00012357899999
Q ss_pred CCCCCCCcchhHHHHHHHHHHcCCCEEEEehh
Q 006689 403 PGGFGNRGVQGKILAAKYAREHRIPYLGICLG 434 (635)
Q Consensus 403 PGGfG~rg~eg~i~air~are~~iP~LGICLG 434 (635)
-||=|+ ++.+++++...++|++||=+|
T Consensus 115 lGGDGT-----~L~aa~~~~~~~~PvlGiN~G 141 (365)
T 3pfn_A 115 LGGDGT-----LLYASSLFQGSVPPVMAFHLG 141 (365)
T ss_dssp ESSTTH-----HHHHHHHCSSSCCCEEEEESS
T ss_pred EcChHH-----HHHHHHHhccCCCCEEEEcCC
Confidence 998553 677888777778999999887
No 87
>2xj4_A MIPZ; replication, cell division, ATPase, WACA; 1.60A {Caulobacter vibrioides} PDB: 2xj9_A* 2xit_A
Probab=71.52 E-value=12 Score=37.41 Aligned_cols=35 Identities=9% Similarity=0.035 Sum_probs=29.1
Q ss_pred CeEEEEccccccchh------hHHHHHHhcCcCCCCceeEEeccCCc
Q 006689 36 LQYMFLCLNECACIN------FFSLFLVQNCQYHPNTHFNLFGLDPY 76 (635)
Q Consensus 36 ~k~i~vtggv~s~lg------s~g~ll~~~~~~~~g~~v~~~K~DpY 76 (635)
+|.|.|+++ -.|.| .|+..|.. +|++|-.+..||+
T Consensus 4 ~kvI~v~s~-KGGvGKTT~a~nLA~~La~-----~G~~VlliD~D~~ 44 (286)
T 2xj4_A 4 TRVIVVGNE-KGGAGKSTIAVHLVTALLY-----GGAKVAVIDLDLR 44 (286)
T ss_dssp CEEEEECCS-SSCTTHHHHHHHHHHHHHH-----TTCCEEEEECCTT
T ss_pred CeEEEEEcC-CCCCCHHHHHHHHHHHHHH-----CCCcEEEEECCCC
Confidence 578888754 46778 88999999 9999999999994
No 88
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=69.84 E-value=2.2 Score=40.82 Aligned_cols=33 Identities=6% Similarity=0.043 Sum_probs=26.7
Q ss_pred CeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEeccC
Q 006689 36 LQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGLD 74 (635)
Q Consensus 36 ~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~D 74 (635)
||-++||||- |||| ++.+.|-. +|++|...=.+
T Consensus 1 Mk~vlVTGas-~gIG~~~a~~l~~-----~G~~V~~~~r~ 34 (230)
T 3guy_A 1 MSLIVITGAS-SGLGAELAKLYDA-----EGKATYLTGRS 34 (230)
T ss_dssp --CEEEESTT-SHHHHHHHHHHHH-----TTCCEEEEESC
T ss_pred CCEEEEecCC-chHHHHHHHHHHH-----CCCEEEEEeCC
Confidence 6889999996 9999 99999999 99998876443
No 89
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=67.40 E-value=3.5 Score=39.90 Aligned_cols=34 Identities=12% Similarity=0.239 Sum_probs=27.6
Q ss_pred CCCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEecc
Q 006689 34 LNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGL 73 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~ 73 (635)
|.+|-++||||- |||| .+.+.|-. +|++|...-.
T Consensus 1 Ms~k~vlVTGas-~GIG~a~a~~l~~-----~G~~V~~~~r 35 (235)
T 3l6e_A 1 MSLGHIIVTGAG-SGLGRALTIGLVE-----RGHQVSMMGR 35 (235)
T ss_dssp --CCEEEEESTT-SHHHHHHHHHHHH-----TTCEEEEEES
T ss_pred CCCCEEEEECCC-CHHHHHHHHHHHH-----CCCEEEEEEC
Confidence 456899999986 8999 99999999 9999987533
No 90
>3cio_A ETK, tyrosine-protein kinase ETK; WZC, escherichia coli tyrosine kinase domain, signaling protein, transferase, inner membrane, membrane; 2.50A {Escherichia coli}
Probab=66.15 E-value=10 Score=38.51 Aligned_cols=149 Identities=14% Similarity=0.182 Sum_probs=84.0
Q ss_pred CCeEEEEccccccchh------hHHHHHHhcCcCCCCceeEEeccCCc-------cccCCCCCCccCcceEEEccCCccc
Q 006689 35 NLQYMFLCLNECACIN------FFSLFLVQNCQYHPNTHFNLFGLDPY-------LNTDAGTMSPFEHGEVFVLDDGGEV 101 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg------s~g~ll~~~~~~~~g~~v~~~K~DpY-------lN~d~gtmsp~eHGEvfV~~DG~E~ 101 (635)
.+|.|+|||. -.|.| .|+..|.. .|.||-.|..||. +++++ +.| -+
T Consensus 103 ~~kvI~vts~-kgG~GKTtva~nLA~~lA~-----~G~rVLLID~D~r~~~l~~~~~~~~------~~g---------l~ 161 (299)
T 3cio_A 103 ENNILMITGA-TPDSGKTFVSSTLAAVIAQ-----SDQKVLFIDADLRRGYSHNLFTVSN------EHG---------LS 161 (299)
T ss_dssp SCCEEEEEES-SSSSCHHHHHHHHHHHHHH-----TTCCEEEEECCTTTCCHHHHTTCCC------SSS---------HH
T ss_pred CCeEEEEECC-CCCCChHHHHHHHHHHHHh-----CCCcEEEEECCCCCccHHHHcCCCC------CCC---------HH
Confidence 4688999874 35777 78888988 9999999999983 22221 111 01
Q ss_pred cCCCCccccccCCCCCCCCcccchHhHHHHHhhhhcCCCCCCeeEEccc-----------chHHHHHHHHHHhcccCCCC
Q 006689 102 DLDLGNYERFMDIKLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPH-----------ITDEIQDWIERVAMIPVDGK 170 (635)
Q Consensus 102 DlDlG~YeRfl~~~l~~~~nittGkiy~~vi~kEr~g~ylG~tvQviPH-----------it~~i~~~i~~~~~~pvd~~ 170 (635)
|+ |. .. .-..++|.+-.. ..+.|+|- -.+.+++.|+.+.
T Consensus 162 ~~--------L~----~~------~~l~~~i~~~~~-----~~l~vl~~g~~~~~~~ell~~~~l~~ll~~l~------- 211 (299)
T 3cio_A 162 EY--------LA----GK------DELNKVIQHFGK-----GGFDVITRGQVPPNPSELLMRDRMRQLLEWAN------- 211 (299)
T ss_dssp HH--------HT----TS------SCHHHHCEEETT-----TTEEEECCCSCCSCHHHHHTSHHHHHHHHHHH-------
T ss_pred HH--------Cc----CC------CCHHHhhhccCC-----CCEEEEECCCCCCCHHHHhCHHHHHHHHHHHH-------
Confidence 10 00 00 001233332110 22445542 1245667777664
Q ss_pred CCCCcEEEEeeCCcccccCcchHHHHHHHhhhhcCCCCEEEEeeeeeeeecCCCccccCCccchhhhhhcCCCcccEEEE
Q 006689 171 EGPVDVCVIELGGTIGDIESMPFIEALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILAC 250 (635)
Q Consensus 171 ~~~~dv~i~EiGGTvGdies~pf~ea~rq~~~~~g~~n~~~ihv~~vp~~~~~~e~KtKptQ~svk~Lrs~Gi~pd~iv~ 250 (635)
..+|+|||+..+..+-- +|. .+.... + ..+++.- .+....+-++.+++.|+..|+..-++|+
T Consensus 212 -~~yD~VIIDtpp~~~~~------d~~-~l~~~a---d-----~vilV~~--~~~~~~~~~~~~~~~l~~~~~~~~GvVl 273 (299)
T 3cio_A 212 -DHYDLVIVDTPPMLAVS------DAA-VVGRSV---G-----TSLLVAR--FGLNTAKEVSLSMQRLEQAGVNIKGAIL 273 (299)
T ss_dssp -HHCSEEEEECCCTTTCT------HHH-HHGGGC---S-----EEEEEEE--TTTSCTTHHHHHHHHHHHTTCCCCCEEE
T ss_pred -hCCCEEEEcCCCCchhH------HHH-HHHHHC---C-----EEEEEEc--CCCChHHHHHHHHHHHHhCCCCeEEEEE
Confidence 36899999999876521 111 111111 1 2223322 3455556678889999999998888777
Q ss_pred ee
Q 006689 251 RS 252 (635)
Q Consensus 251 R~ 252 (635)
-.
T Consensus 274 N~ 275 (299)
T 3cio_A 274 NG 275 (299)
T ss_dssp EE
T ss_pred eC
Confidence 43
No 91
>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*
Probab=65.83 E-value=4.3 Score=39.59 Aligned_cols=31 Identities=6% Similarity=-0.105 Sum_probs=26.4
Q ss_pred CeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEec
Q 006689 36 LQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFG 72 (635)
Q Consensus 36 ~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K 72 (635)
||-++||||- +||| .+.+.|-. +|++|...-
T Consensus 1 Mk~vlVTGas-~gIG~~ia~~l~~-----~G~~V~~~~ 32 (254)
T 1zmt_A 1 MSTAIVTNVK-HFGGMGSALRLSE-----AGHTVACHD 32 (254)
T ss_dssp -CEEEESSTT-STTHHHHHHHHHH-----TTCEEEECC
T ss_pred CeEEEEeCCC-chHHHHHHHHHHH-----CCCEEEEEe
Confidence 5889999986 9999 99999999 999988753
No 92
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=65.54 E-value=4.7 Score=38.88 Aligned_cols=33 Identities=6% Similarity=-0.004 Sum_probs=27.8
Q ss_pred CeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEeccC
Q 006689 36 LQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGLD 74 (635)
Q Consensus 36 ~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~D 74 (635)
||-|+||||- +||| .+.+.|.. +|++|...-.+
T Consensus 1 mk~vlVTGas-~gIG~~~a~~l~~-----~G~~V~~~~r~ 34 (257)
T 1fjh_A 1 MSIIVISGCA-TGIGAATRKVLEA-----AGHQIVGIDIR 34 (257)
T ss_dssp CCEEEEETTT-SHHHHHHHHHHHH-----TTCEEEEEESS
T ss_pred CCEEEEeCCC-CHHHHHHHHHHHH-----CCCEEEEEeCC
Confidence 5789999984 8999 99999999 99999886443
No 93
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=65.30 E-value=6.5 Score=38.95 Aligned_cols=32 Identities=9% Similarity=-0.059 Sum_probs=27.2
Q ss_pred CCCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEe
Q 006689 34 LNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLF 71 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~ 71 (635)
++.|.++|||| -+||| .+.+.|-. +|++|...
T Consensus 27 ~~~k~vlVTGa-s~gIG~~ia~~l~~-----~G~~V~~~ 59 (283)
T 1g0o_A 27 LEGKVALVTGA-GRGIGREMAMELGR-----RGCKVIVN 59 (283)
T ss_dssp CTTCEEEETTT-TSHHHHHHHHHHHH-----TTCEEEEE
T ss_pred CCCCEEEEeCC-CcHHHHHHHHHHHH-----CCCEEEEE
Confidence 44689999998 59999 99999999 89998764
No 94
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=65.08 E-value=4.9 Score=39.87 Aligned_cols=34 Identities=9% Similarity=-0.038 Sum_probs=28.1
Q ss_pred CCCCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEec
Q 006689 33 PLNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFG 72 (635)
Q Consensus 33 ~~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K 72 (635)
.++.|.|+||||- ++|| .+.+.|-. +|++|...-
T Consensus 41 ~l~~k~vlITGas-ggIG~~la~~L~~-----~G~~V~~~~ 75 (285)
T 2c07_A 41 CGENKVALVTGAG-RGIGREIAKMLAK-----SVSHVICIS 75 (285)
T ss_dssp CCSSCEEEEESTT-SHHHHHHHHHHTT-----TSSEEEEEE
T ss_pred cCCCCEEEEECCC-cHHHHHHHHHHHH-----cCCEEEEEc
Confidence 3456899999986 9999 99999988 899988743
No 95
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=64.29 E-value=4.4 Score=39.64 Aligned_cols=35 Identities=9% Similarity=-0.023 Sum_probs=26.6
Q ss_pred CCCCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEeccCC
Q 006689 33 PLNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGLDP 75 (635)
Q Consensus 33 ~~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~Dp 75 (635)
+| ||-|+|||+ ..|| .|...|.. +|++|..+--+|
T Consensus 3 ~m-~~~ilVtGa--G~iG~~l~~~L~~-----~g~~V~~~~r~~ 38 (286)
T 3ius_A 3 AM-TGTLLSFGH--GYTARVLSRALAP-----QGWRIIGTSRNP 38 (286)
T ss_dssp ---CCEEEEETC--CHHHHHHHHHHGG-----GTCEEEEEESCG
T ss_pred CC-cCcEEEECC--cHHHHHHHHHHHH-----CCCEEEEEEcCh
Confidence 45 455999994 8999 88888888 899999875543
No 96
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=64.17 E-value=3.7 Score=40.27 Aligned_cols=36 Identities=11% Similarity=0.171 Sum_probs=30.3
Q ss_pred CCCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEeccCC
Q 006689 34 LNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGLDP 75 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~Dp 75 (635)
|++|-|+||||- ++|| .|.+.|.. +|++|...-.++
T Consensus 1 m~~k~vlVTGas-g~IG~~la~~L~~-----~G~~V~~~~r~~ 37 (267)
T 3rft_A 1 MAMKRLLVTGAA-GQLGRVMRERLAP-----MAEILRLADLSP 37 (267)
T ss_dssp CCEEEEEEESTT-SHHHHHHHHHTGG-----GEEEEEEEESSC
T ss_pred CCCCEEEEECCC-CHHHHHHHHHHHh-----cCCEEEEEecCC
Confidence 457899999984 8899 88898988 899999876665
No 97
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=64.02 E-value=5.8 Score=38.04 Aligned_cols=36 Identities=6% Similarity=0.037 Sum_probs=29.2
Q ss_pred CCCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEeccCC
Q 006689 34 LNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGLDP 75 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~Dp 75 (635)
|+.|-++||||- +||| .+.+.|.. +|++|...-.++
T Consensus 1 m~~k~vlITGas-~gIG~~~a~~l~~-----~G~~V~~~~r~~ 37 (236)
T 1ooe_A 1 MSSGKVIVYGGK-GALGSAILEFFKK-----NGYTVLNIDLSA 37 (236)
T ss_dssp -CCEEEEEETTT-SHHHHHHHHHHHH-----TTEEEEEEESSC
T ss_pred CCCCEEEEECCC-cHHHHHHHHHHHH-----CCCEEEEEecCc
Confidence 345889999984 8999 99999999 999998865443
No 98
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=63.74 E-value=7.2 Score=39.94 Aligned_cols=94 Identities=24% Similarity=0.233 Sum_probs=48.4
Q ss_pred cEEEEEeccCCC--cchHHHHHHHHHHccccceeeeEEEEecCCCCCccccCC-----ChhhhhHH---HHhccCCCEEE
Q 006689 332 VRIAMVGKYTGL--SDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKE-----NPDAYKAA---WKLLKGADGIL 401 (635)
Q Consensus 332 v~IalVGkY~~l--~DaY~SI~~AL~~ag~~~~vkl~i~wi~s~~le~~~~~~-----~p~~y~~a---~~~L~~~DGIl 401 (635)
.||+++.+..+- ......+.+.|+..|+++.+.. ..++++.+..... ....+..+ .....++|.|+
T Consensus 5 ~ki~iI~n~~~~~~~~~~~~l~~~L~~~g~~v~~~~----~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~vi 80 (307)
T 1u0t_A 5 RSVLLVVHTGRDEATETARRVEKVLGDNKIALRVLS----AEAVDRGSLHLAPDDMRAMGVEIEVVDADQHAADGCELVL 80 (307)
T ss_dssp CEEEEEESSSGGGGSHHHHHHHHHHHTTTCEEEEEC---------------------------------------CCCEE
T ss_pred CEEEEEEeCCCHHHHHHHHHHHHHHHHCCCEEEEec----chhhhhhcccccccccccccccccccccccccccCCCEEE
Confidence 479999876542 2234567788888887754421 1111110000000 00001001 01345789999
Q ss_pred ECCCCCCCcchhHHHHHHHHHHcCCCEEEEehh
Q 006689 402 VPGGFGNRGVQGKILAAKYAREHRIPYLGICLG 434 (635)
Q Consensus 402 lPGGfG~rg~eg~i~air~are~~iP~LGICLG 434 (635)
+-||=|+ +..+++.+...++|+|||=+|
T Consensus 81 ~~GGDGT-----~l~a~~~~~~~~~pvlgi~~G 108 (307)
T 1u0t_A 81 VLGGDGT-----FLRAAELARNASIPVLGVNLG 108 (307)
T ss_dssp EEECHHH-----HHHHHHHHHHHTCCEEEEECS
T ss_pred EEeCCHH-----HHHHHHHhccCCCCEEEEeCC
Confidence 9997442 677778877788999999776
No 99
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=63.70 E-value=4.9 Score=38.37 Aligned_cols=32 Identities=9% Similarity=-0.009 Sum_probs=27.3
Q ss_pred CeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEecc
Q 006689 36 LQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGL 73 (635)
Q Consensus 36 ~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~ 73 (635)
+|.++||||- +||| .+.+.|-. +|++|...-.
T Consensus 2 ~k~vlITGas-~gIG~~ia~~l~~-----~G~~V~~~~r 34 (235)
T 3l77_A 2 MKVAVITGAS-RGIGEAIARALAR-----DGYALALGAR 34 (235)
T ss_dssp CCEEEEESCS-SHHHHHHHHHHHH-----TTCEEEEEES
T ss_pred CCEEEEECCC-cHHHHHHHHHHHH-----CCCEEEEEeC
Confidence 6889999984 8999 99999999 9999887533
No 100
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=63.55 E-value=5 Score=39.31 Aligned_cols=32 Identities=6% Similarity=-0.035 Sum_probs=26.1
Q ss_pred CCCCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEE
Q 006689 33 PLNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNL 70 (635)
Q Consensus 33 ~~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~ 70 (635)
.++.|.++||||- +||| .+.+.|-. +|++|..
T Consensus 23 ~l~~k~vlVTGas-~gIG~~la~~l~~-----~G~~v~i 55 (267)
T 4iiu_A 23 NAMSRSVLVTGAS-KGIGRAIARQLAA-----DGFNIGV 55 (267)
T ss_dssp --CCCEEEETTTT-SHHHHHHHHHHHH-----TTCEEEE
T ss_pred ccCCCEEEEECCC-ChHHHHHHHHHHH-----CCCEEEE
Confidence 3456899999985 9999 99999999 8998855
No 101
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=63.28 E-value=5.3 Score=38.30 Aligned_cols=39 Identities=15% Similarity=0.169 Sum_probs=29.0
Q ss_pred ccCCCCeEEEEccccccchh-hHHHHHHhcCcCCCC-ceeEEeccCC
Q 006689 31 YAPLNLQYMFLCLNECACIN-FFSLFLVQNCQYHPN-THFNLFGLDP 75 (635)
Q Consensus 31 ~~~~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g-~~v~~~K~Dp 75 (635)
..+|+||-|+||||- ++|| .|.+.|.. +| ++|...-.+|
T Consensus 18 ~~~~~mk~vlVtGat-G~iG~~l~~~L~~-----~G~~~V~~~~R~~ 58 (236)
T 3qvo_A 18 YFQGHMKNVLILGAG-GQIARHVINQLAD-----KQTIKQTLFARQP 58 (236)
T ss_dssp ----CCEEEEEETTT-SHHHHHHHHHHTT-----CTTEEEEEEESSG
T ss_pred eecCcccEEEEEeCC-cHHHHHHHHHHHh-----CCCceEEEEEcCh
Confidence 356778999999974 7888 88888888 89 8998875554
No 102
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=62.94 E-value=5.9 Score=37.60 Aligned_cols=35 Identities=14% Similarity=0.038 Sum_probs=28.6
Q ss_pred CCCeEEEEccccccchh-hHHHHHHhcCcCCCC--ceeEEeccC
Q 006689 34 LNLQYMFLCLNECACIN-FFSLFLVQNCQYHPN--THFNLFGLD 74 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g--~~v~~~K~D 74 (635)
|+.|.|+||||- ++|| .+.+.|-. +| ++|..+-.+
T Consensus 1 m~~k~vlItGas-ggiG~~la~~l~~-----~g~~~~V~~~~r~ 38 (250)
T 1yo6_A 1 MSPGSVVVTGAN-RGIGLGLVQQLVK-----DKNIRHIIATARD 38 (250)
T ss_dssp CCCSEEEESSCS-SHHHHHHHHHHHT-----CTTCCEEEEEESS
T ss_pred CCCCEEEEecCC-chHHHHHHHHHHh-----cCCCcEEEEEecC
Confidence 456889999984 8999 99999988 89 888886544
No 103
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=62.24 E-value=6.7 Score=38.80 Aligned_cols=36 Identities=14% Similarity=0.026 Sum_probs=29.8
Q ss_pred CCCCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEeccC
Q 006689 33 PLNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGLD 74 (635)
Q Consensus 33 ~~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~D 74 (635)
+.+-|-|+||||- |||| ++.+.|-. +|++|...-.+
T Consensus 11 ~~~~k~vlVTGas-~GIG~aia~~l~~-----~G~~V~~~~r~ 47 (269)
T 3vtz_A 11 EFTDKVAIVTGGS-SGIGLAVVDALVR-----YGAKVVSVSLD 47 (269)
T ss_dssp TTTTCEEEESSTT-SHHHHHHHHHHHH-----TTCEEEEEESC
T ss_pred CCCCCEEEEeCCC-CHHHHHHHHHHHH-----CCCEEEEEeCC
Confidence 3457999999986 8999 99999999 99999876443
No 104
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=61.90 E-value=6.1 Score=37.90 Aligned_cols=34 Identities=12% Similarity=0.038 Sum_probs=28.6
Q ss_pred CCCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEecc
Q 006689 34 LNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGL 73 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~ 73 (635)
++.|.++||||- |||| .+.+.|-. +|++|...=.
T Consensus 12 l~~k~vlITGas-~gIG~~ia~~l~~-----~G~~V~~~~r 46 (247)
T 3i1j_A 12 LKGRVILVTGAA-RGIGAAAARAYAA-----HGASVVLLGR 46 (247)
T ss_dssp TTTCEEEESSTT-SHHHHHHHHHHHH-----TTCEEEEEES
T ss_pred CCCCEEEEeCCC-ChHHHHHHHHHHH-----CCCEEEEEec
Confidence 456899999995 9999 99999999 9999887543
No 105
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=61.68 E-value=6.3 Score=39.00 Aligned_cols=31 Identities=13% Similarity=0.094 Sum_probs=26.9
Q ss_pred CCCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEE
Q 006689 34 LNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNL 70 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~ 70 (635)
++.|.++||||- |||| .+.+.|-. +|++|..
T Consensus 26 l~~k~vlVTGas-~gIG~aia~~la~-----~G~~V~~ 57 (269)
T 4dmm_A 26 LTDRIALVTGAS-RGIGRAIALELAA-----AGAKVAV 57 (269)
T ss_dssp TTTCEEEETTCS-SHHHHHHHHHHHH-----TTCEEEE
T ss_pred CCCCEEEEECCC-CHHHHHHHHHHHH-----CCCEEEE
Confidence 446999999986 9999 99999999 8998876
No 106
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=61.62 E-value=6 Score=37.65 Aligned_cols=33 Identities=6% Similarity=0.013 Sum_probs=27.1
Q ss_pred CeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEeccC
Q 006689 36 LQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGLD 74 (635)
Q Consensus 36 ~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~D 74 (635)
||-|+||||- ++|| .+.+.|.. +|++|..+-.+
T Consensus 1 Mk~vlVtGas-g~iG~~l~~~L~~-----~g~~V~~~~r~ 34 (255)
T 2dkn_A 1 MSVIAITGSA-SGIGAALKELLAR-----AGHTVIGIDRG 34 (255)
T ss_dssp -CEEEEETTT-SHHHHHHHHHHHH-----TTCEEEEEESS
T ss_pred CcEEEEeCCC-cHHHHHHHHHHHh-----CCCEEEEEeCC
Confidence 5779999985 8999 89998888 89999987443
No 107
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=61.39 E-value=6.6 Score=38.36 Aligned_cols=34 Identities=3% Similarity=-0.286 Sum_probs=28.7
Q ss_pred CCCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEecc
Q 006689 34 LNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGL 73 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~ 73 (635)
++.|.++||||- |||| ++.+.|-. +|++|...-.
T Consensus 5 ~~~k~vlVTGas-~GIG~aia~~l~~-----~G~~V~~~~r 39 (252)
T 3h7a_A 5 PRNATVAVIGAG-DYIGAEIAKKFAA-----EGFTVFAGRR 39 (252)
T ss_dssp CCSCEEEEECCS-SHHHHHHHHHHHH-----TTCEEEEEES
T ss_pred CCCCEEEEECCC-chHHHHHHHHHHH-----CCCEEEEEeC
Confidence 346899999986 9999 99999999 9999887543
No 108
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=60.89 E-value=7.4 Score=37.16 Aligned_cols=31 Identities=6% Similarity=-0.088 Sum_probs=26.6
Q ss_pred CCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEe
Q 006689 35 NLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLF 71 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~ 71 (635)
+.|.|+||||- ++|| .+.+.|-. +|++|..+
T Consensus 4 ~~~~vlItGas-ggiG~~~a~~l~~-----~G~~V~~~ 35 (247)
T 2hq1_A 4 KGKTAIVTGSS-RGLGKAIAWKLGN-----MGANIVLN 35 (247)
T ss_dssp TTCEEEESSCS-SHHHHHHHHHHHH-----TTCEEEEE
T ss_pred CCcEEEEECCC-chHHHHHHHHHHH-----CCCEEEEE
Confidence 35789999986 9999 99999999 89988775
No 109
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=60.84 E-value=6.9 Score=39.30 Aligned_cols=32 Identities=6% Similarity=-0.047 Sum_probs=27.3
Q ss_pred CCCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEe
Q 006689 34 LNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLF 71 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~ 71 (635)
++.|.|+||||- +||| .+.+.|-. +|++|...
T Consensus 32 l~~k~vlVTGas-~gIG~aia~~L~~-----~G~~V~~~ 64 (291)
T 3cxt_A 32 LKGKIALVTGAS-YGIGFAIASAYAK-----AGATIVFN 64 (291)
T ss_dssp CTTCEEEEETCS-SHHHHHHHHHHHH-----TTCEEEEE
T ss_pred CCCCEEEEeCCC-cHHHHHHHHHHHH-----CCCEEEEE
Confidence 456899999984 9999 99999989 89998875
No 110
>3ksm_A ABC-type sugar transport system, periplasmic COMP; periplasmic component, PSI- 11023L, structural genomics, protein structure initiative; HET: BDR; 1.90A {Hahella chejuensis}
Probab=60.72 E-value=27 Score=33.20 Aligned_cols=86 Identities=13% Similarity=0.076 Sum_probs=44.4
Q ss_pred cEEEEEeccCCCcch-HHHHHHHHHHccccceeeeEEEEecCCCCCccccCCChhhhhHHHHhc--cC-CCEEEECCCCC
Q 006689 332 VRIAMVGKYTGLSDA-YLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KG-ADGILVPGGFG 407 (635)
Q Consensus 332 v~IalVGkY~~l~Da-Y~SI~~AL~~ag~~~~vkl~i~wi~s~~le~~~~~~~p~~y~~a~~~L--~~-~DGIllPGGfG 407 (635)
++||++-.. ..+. |..+.+.++.+..+.+..+.+.+.++.. +++.-.+..+.+ .+ +|||++.+...
T Consensus 1 ~~Ig~i~~~--~~~~~~~~~~~gi~~~~~~~g~~~~~~~~~~~~--------~~~~~~~~i~~l~~~~~vdgii~~~~~~ 70 (276)
T 3ksm_A 1 PKLLLVLKG--DSNAYWRQVYLGAQKAADEAGVTLLHRSTKDDG--------DIAGQIQILSYHLSQAPPDALILAPNSA 70 (276)
T ss_dssp CEEEEECSC--SSSTHHHHHHHHHHHHHHHHTCEEEECCCSSTT--------CHHHHHHHHHHHHHHSCCSEEEECCSST
T ss_pred CeEEEEeCC--CCChHHHHHHHHHHHHHHHcCCEEEEECCCCCC--------CHHHHHHHHHHHHHhCCCCEEEEeCCCH
Confidence 478888432 3333 4455555555554444443333322211 122222222222 46 99999987321
Q ss_pred CCcchhHHHHHHHHHHcCCCEEEE
Q 006689 408 NRGVQGKILAAKYAREHRIPYLGI 431 (635)
Q Consensus 408 ~rg~eg~i~air~are~~iP~LGI 431 (635)
.. ....++.+.+.++|+.-+
T Consensus 71 -~~---~~~~~~~~~~~~ipvV~~ 90 (276)
T 3ksm_A 71 -ED---LTPSVAQYRARNIPVLVV 90 (276)
T ss_dssp -TT---THHHHHHHHHTTCCEEEE
T ss_pred -HH---HHHHHHHHHHCCCcEEEE
Confidence 11 234567777889998766
No 111
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=60.54 E-value=6.5 Score=38.25 Aligned_cols=34 Identities=3% Similarity=-0.027 Sum_probs=29.1
Q ss_pred CeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEeccCC
Q 006689 36 LQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGLDP 75 (635)
Q Consensus 36 ~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~Dp 75 (635)
.|.|+||||- +||| .|.+.|-. +|++|..+-.++
T Consensus 22 ~k~vlITGas-~gIG~~la~~l~~-----~G~~V~~~~r~~ 56 (251)
T 3orf_A 22 SKNILVLGGS-GALGAEVVKFFKS-----KSWNTISIDFRE 56 (251)
T ss_dssp CCEEEEETTT-SHHHHHHHHHHHH-----TTCEEEEEESSC
T ss_pred CCEEEEECCC-CHHHHHHHHHHHH-----CCCEEEEEeCCc
Confidence 6899999986 8999 99999999 999999875443
No 112
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=59.85 E-value=9 Score=38.33 Aligned_cols=33 Identities=9% Similarity=0.119 Sum_probs=27.9
Q ss_pred CCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEecc
Q 006689 35 NLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGL 73 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~ 73 (635)
+-|.++||||- |||| .+.+.|-. +|++|...-.
T Consensus 46 ~gk~vlVTGas-~GIG~aia~~la~-----~G~~V~~~~r 79 (291)
T 3ijr_A 46 KGKNVLITGGD-SGIGRAVSIAFAK-----EGANIAIAYL 79 (291)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHH-----TTCEEEEEES
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHH-----CCCEEEEEeC
Confidence 45899999985 8999 99999999 9999887533
No 113
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=59.50 E-value=5.9 Score=37.71 Aligned_cols=30 Identities=10% Similarity=0.119 Sum_probs=25.8
Q ss_pred CeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEe
Q 006689 36 LQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLF 71 (635)
Q Consensus 36 ~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~ 71 (635)
+|.|+|||| -++|| .+.+.|-. +|++|..+
T Consensus 1 ~k~vlITGa-sggiG~~~a~~l~~-----~G~~v~~~ 31 (245)
T 2ph3_A 1 MRKALITGA-SRGIGRAIALRLAE-----DGFALAIH 31 (245)
T ss_dssp CCEEEETTT-TSHHHHHHHHHHHT-----TTCEEEEE
T ss_pred CCEEEEeCC-CchHHHHHHHHHHH-----CCCEEEEE
Confidence 478999999 48999 99999988 89988775
No 114
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=59.15 E-value=7.9 Score=38.45 Aligned_cols=32 Identities=16% Similarity=0.044 Sum_probs=27.8
Q ss_pred CCCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEe
Q 006689 34 LNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLF 71 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~ 71 (635)
++.|.++||||- |||| .+.+.|-. +|++|...
T Consensus 31 l~gk~~lVTGas-~GIG~aia~~la~-----~G~~V~~~ 63 (275)
T 4imr_A 31 LRGRTALVTGSS-RGIGAAIAEGLAG-----AGAHVILH 63 (275)
T ss_dssp CTTCEEEETTCS-SHHHHHHHHHHHH-----TTCEEEEE
T ss_pred CCCCEEEEECCC-CHHHHHHHHHHHH-----CCCEEEEE
Confidence 446899999986 9999 99999999 99999875
No 115
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=59.11 E-value=7.1 Score=38.12 Aligned_cols=34 Identities=3% Similarity=0.075 Sum_probs=28.6
Q ss_pred CCCCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEec
Q 006689 33 PLNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFG 72 (635)
Q Consensus 33 ~~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K 72 (635)
.++.|.++||||- +||| ++.+.|-. +|++|...-
T Consensus 3 ~l~~k~vlVTGas-~gIG~aia~~l~~-----~G~~V~~~~ 37 (257)
T 3imf_A 3 AMKEKVVIITGGS-SGMGKGMATRFAK-----EGARVVITG 37 (257)
T ss_dssp TTTTCEEEETTTT-SHHHHHHHHHHHH-----TTCEEEEEE
T ss_pred CCCCCEEEEECCC-CHHHHHHHHHHHH-----CCCEEEEEe
Confidence 3456899999985 8999 99999999 999988753
No 116
>3gbv_A Putative LACI-family transcriptional regulator; NYSGXRC, PSI-II, 11231J, structur genomics, protein structure initiative; 2.20A {Bacteroides fragilis}
Probab=58.98 E-value=44 Score=32.18 Aligned_cols=91 Identities=14% Similarity=0.117 Sum_probs=46.6
Q ss_pred CccEEEEEeccCCCcch-HHHHHHHHHHccccc-eeeeEEEEecCCCCCccccCCChhhhhHHHHhc--cCCCEEEECCC
Q 006689 330 EPVRIAMVGKYTGLSDA-YLSILKALLHASVDL-RKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGG 405 (635)
Q Consensus 330 ~~v~IalVGkY~~l~Da-Y~SI~~AL~~ag~~~-~vkl~i~wi~s~~le~~~~~~~p~~y~~a~~~L--~~~DGIllPGG 405 (635)
++.+||++-... ..+. |..+++.++.+..+. +..+.+.+.....- +++...+..+.+ .++||||+.+.
T Consensus 7 ~~~~Igvi~~~~-~~~~~~~~~~~gi~~~a~~~~g~~~~~~~~~~~~~-------~~~~~~~~i~~l~~~~vdgiii~~~ 78 (304)
T 3gbv_A 7 KKYTFACLLPKH-LEGEYWTDVQKGIREAVTTYSDFNISANITHYDPY-------DYNSFVATSQAVIEEQPDGVMFAPT 78 (304)
T ss_dssp CCEEEEEEEECC-CTTSHHHHHHHHHHHHHHHTGGGCEEEEEEEECSS-------CHHHHHHHHHHHHTTCCSEEEECCS
T ss_pred CcceEEEEecCC-CCchHHHHHHHHHHHHHHHHHhCCeEEEEEcCCCC-------CHHHHHHHHHHHHhcCCCEEEECCC
Confidence 456898773221 0233 445666555554443 33334444432211 222222222333 58999999874
Q ss_pred CCCCcchhHHHHHHHHHHcCCCEEEEe
Q 006689 406 FGNRGVQGKILAAKYAREHRIPYLGIC 432 (635)
Q Consensus 406 fG~rg~eg~i~air~are~~iP~LGIC 432 (635)
.. +.....++.+.+.++|+.-+.
T Consensus 79 ~~----~~~~~~~~~~~~~~iPvV~~~ 101 (304)
T 3gbv_A 79 VP----QYTKGFTDALNELGIPYIYID 101 (304)
T ss_dssp SG----GGTHHHHHHHHHHTCCEEEES
T ss_pred Ch----HHHHHHHHHHHHCCCeEEEEe
Confidence 21 122345667777899986553
No 117
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=58.93 E-value=6.9 Score=38.04 Aligned_cols=31 Identities=3% Similarity=-0.020 Sum_probs=26.9
Q ss_pred CCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEe
Q 006689 35 NLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLF 71 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~ 71 (635)
++|.++||||- |||| ++.+.|-. +|++|...
T Consensus 6 ~~k~vlVTGas-~gIG~~~a~~l~~-----~G~~v~~~ 37 (264)
T 3i4f_A 6 FVRHALITAGT-KGLGKQVTEKLLA-----KGYSVTVT 37 (264)
T ss_dssp CCCEEEETTTT-SHHHHHHHHHHHH-----TTCEEEEE
T ss_pred ccCEEEEeCCC-chhHHHHHHHHHH-----CCCEEEEE
Confidence 36899999985 8999 99999999 89988764
No 118
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=58.82 E-value=8.2 Score=38.31 Aligned_cols=35 Identities=11% Similarity=-0.002 Sum_probs=28.6
Q ss_pred cCCCCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEec
Q 006689 32 APLNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFG 72 (635)
Q Consensus 32 ~~~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K 72 (635)
..++.|.|+||||- ++|| .+.+.|-. +|++|..+-
T Consensus 14 ~~l~~k~vlVTGas-ggIG~~la~~l~~-----~G~~V~~~~ 49 (303)
T 1yxm_A 14 GLLQGQVAIVTGGA-TGIGKAIVKELLE-----LGSNVVIAS 49 (303)
T ss_dssp TTTTTCEEEEETTT-SHHHHHHHHHHHH-----TTCEEEEEE
T ss_pred CCCCCCEEEEECCC-cHHHHHHHHHHHH-----CCCEEEEEe
Confidence 34556899999984 9999 99999988 899988753
No 119
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=58.73 E-value=6.8 Score=38.86 Aligned_cols=34 Identities=9% Similarity=-0.133 Sum_probs=28.4
Q ss_pred CCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEeccC
Q 006689 35 NLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGLD 74 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~D 74 (635)
+.|.++||||- |||| .+.+.|-. +|++|...-.+
T Consensus 3 ~~k~~lVTGas-~GIG~aia~~la~-----~G~~V~~~~r~ 37 (264)
T 3tfo_A 3 MDKVILITGAS-GGIGEGIARELGV-----AGAKILLGARR 37 (264)
T ss_dssp TTCEEEESSTT-SHHHHHHHHHHHH-----TTCEEEEEESS
T ss_pred CCCEEEEeCCc-cHHHHHHHHHHHH-----CCCEEEEEECC
Confidence 35899999997 9999 99999999 89998876443
No 120
>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}
Probab=58.52 E-value=6.7 Score=37.28 Aligned_cols=34 Identities=9% Similarity=-0.034 Sum_probs=29.0
Q ss_pred CCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEeccC
Q 006689 35 NLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGLD 74 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~D 74 (635)
+.|.++||||- |||| .+.+.|-. +|++|...-.+
T Consensus 5 ~~k~vlVTGas-~gIG~~~a~~l~~-----~G~~V~~~~r~ 39 (223)
T 3uce_A 5 DKTVYVVLGGT-SGIGAELAKQLES-----EHTIVHVASRQ 39 (223)
T ss_dssp CCEEEEEETTT-SHHHHHHHHHHCS-----TTEEEEEESGG
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHH-----CCCEEEEecCC
Confidence 46899999986 8999 99999999 99999886544
No 121
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=58.41 E-value=6.9 Score=39.09 Aligned_cols=32 Identities=6% Similarity=-0.104 Sum_probs=27.1
Q ss_pred CCCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEe
Q 006689 34 LNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLF 71 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~ 71 (635)
++.|.++||||- |||| .+.+.|-. +|++|.+.
T Consensus 7 l~~k~~lVTGas-~GIG~aia~~la~-----~G~~V~~~ 39 (291)
T 1e7w_A 7 PTVPVALVTGAA-KRLGRSIAEGLHA-----EGYAVCLH 39 (291)
T ss_dssp -CCCEEEETTCS-SHHHHHHHHHHHH-----TTCEEEEE
T ss_pred CCCCEEEEECCC-chHHHHHHHHHHH-----CCCeEEEE
Confidence 446899999985 9999 99999999 89998775
No 122
>3end_A Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} PDB: 3fwy_A*
Probab=58.36 E-value=8 Score=38.73 Aligned_cols=38 Identities=13% Similarity=0.088 Sum_probs=33.3
Q ss_pred CCeEEEEccccccchh------hHHHHHHhcCcCCCCceeEEeccCCcccc
Q 006689 35 NLQYMFLCLNECACIN------FFSLFLVQNCQYHPNTHFNLFGLDPYLNT 79 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg------s~g~ll~~~~~~~~g~~v~~~K~DpYlN~ 79 (635)
++|.|.|+ | -.|.| .|+..|.. +|++|-.|..||..|.
T Consensus 40 ~~~vI~v~-~-KGGvGKTT~a~nLA~~La~-----~G~~VlliD~D~~~~~ 83 (307)
T 3end_A 40 GAKVFAVY-G-KGGIGKSTTSSNLSAAFSI-----LGKRVLQIGCDPKHDS 83 (307)
T ss_dssp CCEEEEEE-C-STTSSHHHHHHHHHHHHHH-----TTCCEEEEEESSSCCT
T ss_pred CceEEEEE-C-CCCccHHHHHHHHHHHHHH-----CCCeEEEEeCCCCCCH
Confidence 57999999 7 99999 88999999 9999999999996443
No 123
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=58.29 E-value=7.2 Score=37.72 Aligned_cols=31 Identities=6% Similarity=-0.026 Sum_probs=25.8
Q ss_pred CCCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEE
Q 006689 34 LNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNL 70 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~ 70 (635)
.+.|.|+||||- |||| .+.+.|-. +|++|..
T Consensus 11 ~~~k~vlITGas-~giG~~ia~~l~~-----~G~~v~~ 42 (256)
T 3ezl_A 11 MSQRIAYVTGGM-GGIGTSICQRLHK-----DGFRVVA 42 (256)
T ss_dssp --CEEEEETTTT-SHHHHHHHHHHHH-----TTEEEEE
T ss_pred CCCCEEEEECCC-ChHHHHHHHHHHH-----CCCEEEE
Confidence 357999999995 8999 99999999 8998865
No 124
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=58.15 E-value=7.6 Score=38.66 Aligned_cols=32 Identities=9% Similarity=0.077 Sum_probs=27.4
Q ss_pred CCCCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEE
Q 006689 33 PLNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNL 70 (635)
Q Consensus 33 ~~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~ 70 (635)
+++.|.++||||- |||| .+.+.|-. +|++|..
T Consensus 22 ~l~~k~~lVTGas-~GIG~~ia~~la~-----~G~~V~~ 54 (281)
T 3v2h_A 22 SMMTKTAVITGST-SGIGLAIARTLAK-----AGANIVL 54 (281)
T ss_dssp CCTTCEEEEETCS-SHHHHHHHHHHHH-----TTCEEEE
T ss_pred ccCCCEEEEeCCC-cHHHHHHHHHHHH-----CCCEEEE
Confidence 4456999999985 8999 99999999 8998876
No 125
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=58.14 E-value=7.7 Score=37.65 Aligned_cols=33 Identities=9% Similarity=0.000 Sum_probs=28.0
Q ss_pred CCCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEec
Q 006689 34 LNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFG 72 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K 72 (635)
++.|.++||||- |||| .+.+.|-. +|++|...-
T Consensus 5 l~~k~~lVTGas-~gIG~aia~~l~~-----~G~~V~~~~ 38 (247)
T 2jah_A 5 LQGKVALITGAS-SGIGEATARALAA-----EGAAVAIAA 38 (247)
T ss_dssp TTTCEEEEESCS-SHHHHHHHHHHHH-----TTCEEEEEE
T ss_pred CCCCEEEEECCC-CHHHHHHHHHHHH-----CCCEEEEEE
Confidence 446899999985 9999 99999999 899988753
No 126
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=57.98 E-value=7.7 Score=37.81 Aligned_cols=33 Identities=18% Similarity=0.126 Sum_probs=27.8
Q ss_pred CCCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEec
Q 006689 34 LNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFG 72 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K 72 (635)
++.|.++||||- |||| .+.+.|-. +|++|...-
T Consensus 3 l~~k~vlVTGas-~gIG~~ia~~l~~-----~G~~V~~~~ 36 (260)
T 2qq5_A 3 MNGQVCVVTGAS-RGIGRGIALQLCK-----AGATVYITG 36 (260)
T ss_dssp TTTCEEEESSTT-SHHHHHHHHHHHH-----TTCEEEEEE
T ss_pred CCCCEEEEeCCC-chHHHHHHHHHHH-----CCCEEEEEe
Confidence 456899999984 8999 99999999 899988753
No 127
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=57.58 E-value=6.3 Score=35.02 Aligned_cols=39 Identities=21% Similarity=0.271 Sum_probs=33.1
Q ss_pred hccCCCEEEECCCCCCCcchhHHHHHHHHHHcCCCEEEE
Q 006689 393 LLKGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 431 (635)
Q Consensus 393 ~L~~~DGIllPGGfG~rg~eg~i~air~are~~iP~LGI 431 (635)
.++.+|++++.-|.-+..-++....|+.|.+.++|++||
T Consensus 35 ~I~~~~~vIvL~G~~t~~s~wv~~EI~~A~~~gkpIigV 73 (111)
T 1eiw_A 35 TPEDADAVIVLAGLWGTRRDEILGAVDLARKSSKPIITV 73 (111)
T ss_dssp CSSSCSEEEEEGGGTTTSHHHHHHHHHHHTTTTCCEEEE
T ss_pred ccccCCEEEEEeCCCcCCChHHHHHHHHHHHcCCCEEEE
Confidence 467899999888877666677788889999999999998
No 128
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=57.39 E-value=8.2 Score=37.25 Aligned_cols=31 Identities=6% Similarity=-0.008 Sum_probs=26.4
Q ss_pred CCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEe
Q 006689 35 NLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLF 71 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~ 71 (635)
+.|.++||||- +||| .+.+.|-. +|++|...
T Consensus 3 ~~k~vlVTGas-~giG~~ia~~l~~-----~G~~V~~~ 34 (246)
T 2uvd_A 3 KGKVALVTGAS-RGIGRAIAIDLAK-----QGANVVVN 34 (246)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHH-----TTCEEEEE
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHH-----CCCEEEEE
Confidence 45889999986 9999 99999999 89988764
No 129
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=57.09 E-value=9.2 Score=37.17 Aligned_cols=33 Identities=9% Similarity=0.056 Sum_probs=28.1
Q ss_pred CCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEecc
Q 006689 35 NLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGL 73 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~ 73 (635)
+-|.++||||- |||| ++.+.|-. +|++|...-.
T Consensus 6 ~~k~~lVTGas-~gIG~aia~~l~~-----~G~~V~~~~r 39 (257)
T 3tpc_A 6 KSRVFIVTGAS-SGLGAAVTRMLAQ-----EGATVLGLDL 39 (257)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHH-----TTCEEEEEES
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHH-----CCCEEEEEeC
Confidence 35899999995 9999 99999999 9999987643
No 130
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=56.97 E-value=9.1 Score=37.25 Aligned_cols=35 Identities=9% Similarity=0.025 Sum_probs=28.5
Q ss_pred CCCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEeccC
Q 006689 34 LNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGLD 74 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~D 74 (635)
+..|-++||||- +||| .+.+.|-. +|++|...-.+
T Consensus 4 l~~k~vlVTGas-~gIG~~ia~~l~~-----~G~~V~~~~r~ 39 (256)
T 2d1y_A 4 FAGKGVLVTGGA-RGIGRAIAQAFAR-----EGALVALCDLR 39 (256)
T ss_dssp TTTCEEEEETTT-SHHHHHHHHHHHH-----TTCEEEEEESS
T ss_pred CCCCEEEEeCCC-CHHHHHHHHHHHH-----CCCEEEEEeCC
Confidence 345889999985 8999 99999999 89998876433
No 131
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=56.91 E-value=9.2 Score=37.04 Aligned_cols=34 Identities=9% Similarity=0.029 Sum_probs=28.1
Q ss_pred CCCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEecc
Q 006689 34 LNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGL 73 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~ 73 (635)
++.|.++||||- +||| .+.+.|-. +|++|...-.
T Consensus 5 l~~k~vlVTGas-~gIG~~ia~~l~~-----~G~~V~~~~r 39 (249)
T 2ew8_A 5 LKDKLAVITGGA-NGIGRAIAERFAV-----EGADIAIADL 39 (249)
T ss_dssp TTTCEEEEETTT-SHHHHHHHHHHHH-----TTCEEEEEES
T ss_pred CCCCEEEEeCCC-cHHHHHHHHHHHH-----CCCEEEEEcC
Confidence 446889999984 8999 99999999 8999887543
No 132
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=56.90 E-value=8.2 Score=37.50 Aligned_cols=32 Identities=9% Similarity=-0.054 Sum_probs=27.6
Q ss_pred CCCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEe
Q 006689 34 LNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLF 71 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~ 71 (635)
++-|.++||||- |||| .+.+.|-. +|++|...
T Consensus 4 l~gk~vlVTGas-~gIG~a~a~~l~~-----~G~~V~~~ 36 (247)
T 3rwb_A 4 LAGKTALVTGAA-QGIGKAIAARLAA-----DGATVIVS 36 (247)
T ss_dssp TTTCEEEEETTT-SHHHHHHHHHHHH-----TTCEEEEE
T ss_pred cCCCEEEEECCC-CHHHHHHHHHHHH-----CCCEEEEE
Confidence 456899999985 8999 99999999 99999874
No 133
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=56.87 E-value=8.1 Score=38.01 Aligned_cols=36 Identities=8% Similarity=0.022 Sum_probs=29.5
Q ss_pred CCCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEeccCC
Q 006689 34 LNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGLDP 75 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~Dp 75 (635)
++.|.|+||||- +||| .+.+.|-. +|++|...-.++
T Consensus 6 l~~k~vlVTGas-~gIG~~ia~~l~~-----~G~~V~~~~r~~ 42 (264)
T 2dtx_A 6 LRDKVVIVTGAS-MGIGRAIAERFVD-----EGSKVIDLSIHD 42 (264)
T ss_dssp GTTCEEEEESCS-SHHHHHHHHHHHH-----TTCEEEEEESSC
T ss_pred cCCCEEEEeCCC-CHHHHHHHHHHHH-----CCCEEEEEecCc
Confidence 345889999985 8999 99999999 999998865443
No 134
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=56.73 E-value=8.1 Score=37.64 Aligned_cols=34 Identities=9% Similarity=-0.169 Sum_probs=28.1
Q ss_pred CCCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEecc
Q 006689 34 LNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGL 73 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~ 73 (635)
++.|.++|||| -+||| .+.+.|-. +|++|...-.
T Consensus 7 l~~k~vlVTGa-s~giG~~ia~~l~~-----~G~~V~~~~r 41 (260)
T 2ae2_A 7 LEGCTALVTGG-SRGIGYGIVEELAS-----LGASVYTCSR 41 (260)
T ss_dssp CTTCEEEEESC-SSHHHHHHHHHHHH-----TTCEEEEEES
T ss_pred CCCCEEEEECC-CcHHHHHHHHHHHH-----CCCEEEEEeC
Confidence 34588999999 58999 99999999 8999887543
No 135
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=56.66 E-value=7.5 Score=38.10 Aligned_cols=32 Identities=9% Similarity=-0.049 Sum_probs=26.2
Q ss_pred CCCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEe
Q 006689 34 LNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLF 71 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~ 71 (635)
|+.|.++||||- +||| .+.+.|-. +|++|...
T Consensus 9 ~~~k~~lVTGas-~gIG~~ia~~l~~-----~G~~V~~~ 41 (276)
T 1mxh_A 9 SECPAAVITGGA-RRIGHSIAVRLHQ-----QGFRVVVH 41 (276)
T ss_dssp --CCEEEETTCS-SHHHHHHHHHHHH-----TTCEEEEE
T ss_pred cCCCEEEEeCCC-cHHHHHHHHHHHH-----CCCEEEEE
Confidence 445889999986 9999 99999999 89988764
No 136
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=56.60 E-value=8.3 Score=38.02 Aligned_cols=33 Identities=6% Similarity=-0.064 Sum_probs=27.9
Q ss_pred CCCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEec
Q 006689 34 LNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFG 72 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K 72 (635)
++.|.++||||- +||| .+.+.|-. +|++|...-
T Consensus 19 l~~k~~lVTGas-~gIG~~ia~~l~~-----~G~~V~~~~ 52 (267)
T 1vl8_A 19 LRGRVALVTGGS-RGLGFGIAQGLAE-----AGCSVVVAS 52 (267)
T ss_dssp CTTCEEEEETTT-SHHHHHHHHHHHH-----TTCEEEEEE
T ss_pred CCCCEEEEECCC-CHHHHHHHHHHHH-----CCCEEEEEe
Confidence 346899999985 9999 99999999 899988753
No 137
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=56.47 E-value=8.7 Score=36.13 Aligned_cols=35 Identities=17% Similarity=0.303 Sum_probs=27.5
Q ss_pred CCCeEEEEccccccchh-hHHHHHH-hcCcCCCCceeEEeccC
Q 006689 34 LNLQYMFLCLNECACIN-FFSLFLV-QNCQYHPNTHFNLFGLD 74 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg-s~g~ll~-~~~~~~~g~~v~~~K~D 74 (635)
++||-|+|||| -++|| .+.+.|. . +|++|..+-.+
T Consensus 3 ~mmk~vlVtGa-sg~iG~~~~~~l~~~-----~g~~V~~~~r~ 39 (221)
T 3r6d_A 3 AMYXYITILGA-AGQIAQXLTATLLTY-----TDMHITLYGRQ 39 (221)
T ss_dssp CSCSEEEEEST-TSHHHHHHHHHHHHH-----CCCEEEEEESS
T ss_pred ceEEEEEEEeC-CcHHHHHHHHHHHhc-----CCceEEEEecC
Confidence 34788999997 47889 7777777 8 89999887554
No 138
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=56.23 E-value=12 Score=37.62 Aligned_cols=89 Identities=21% Similarity=0.132 Sum_probs=48.5
Q ss_pred cEEEEEeccCC--CcchHHHHHHHHHHccccceeeeEEEEecCCCCCccccCCChhhhhHHHHhccCCCEEEECCCCCCC
Q 006689 332 VRIAMVGKYTG--LSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNR 409 (635)
Q Consensus 332 v~IalVGkY~~--l~DaY~SI~~AL~~ag~~~~vkl~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIllPGGfG~r 409 (635)
.||+++.+-.+ .......+.+.|+..|+++.+. ...++.+..... . .. .......++|.|++-||=|+
T Consensus 6 kki~ii~np~~~~~~~~~~~i~~~l~~~g~~v~~~----~~~~~~~~~~~~--~--~~-~~~~~~~~~D~vi~~GGDGT- 75 (292)
T 2an1_A 6 KCIGIVGHPRHPTALTTHEMLYRWLCDQGYEVIVE----QQIAHELQLKNV--P--TG-TLAEIGQQADLAVVVGGDGN- 75 (292)
T ss_dssp CEEEEECC-------CHHHHHHHHHHHTTCEEEEE----HHHHHHTTCSSC--C--EE-CHHHHHHHCSEEEECSCHHH-
T ss_pred cEEEEEEcCCCHHHHHHHHHHHHHHHHCCCEEEEe----cchhhhcccccc--c--cc-chhhcccCCCEEEEEcCcHH-
Confidence 47888865432 2234566788899888875432 001111100000 0 00 00112346899999998442
Q ss_pred cchhHHHHHHHHHHcCCCEEEEehh
Q 006689 410 GVQGKILAAKYAREHRIPYLGICLG 434 (635)
Q Consensus 410 g~eg~i~air~are~~iP~LGICLG 434 (635)
+..+++.+.+.++|+|||=+|
T Consensus 76 ----~l~a~~~~~~~~~P~lGI~~G 96 (292)
T 2an1_A 76 ----MLGAARTLARYDINVIGINRG 96 (292)
T ss_dssp ----HHHHHHHHTTSSCEEEEBCSS
T ss_pred ----HHHHHHHhhcCCCCEEEEECC
Confidence 566777776778999999655
No 139
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=56.16 E-value=8.4 Score=37.08 Aligned_cols=32 Identities=9% Similarity=0.017 Sum_probs=27.1
Q ss_pred CCCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEe
Q 006689 34 LNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLF 71 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~ 71 (635)
++.|.|+||||- ++|| .+.+.|.. +|++|..+
T Consensus 11 l~~k~vlItGas-ggiG~~la~~l~~-----~G~~V~~~ 43 (260)
T 3awd_A 11 LDNRVAIVTGGA-QNIGLACVTALAE-----AGARVIIA 43 (260)
T ss_dssp CTTCEEEEETTT-SHHHHHHHHHHHH-----TTCEEEEE
T ss_pred CCCCEEEEeCCC-chHHHHHHHHHHH-----CCCEEEEE
Confidence 345889999985 9999 99999999 89998875
No 140
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=55.97 E-value=9.8 Score=36.71 Aligned_cols=34 Identities=12% Similarity=-0.010 Sum_probs=28.2
Q ss_pred CCCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEecc
Q 006689 34 LNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGL 73 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~ 73 (635)
++.|.|+||||- ++|| .+.+.|-. +|++|..+-.
T Consensus 10 ~~~k~vlVTGas-ggiG~~~a~~l~~-----~G~~V~~~~r 44 (265)
T 2o23_A 10 VKGLVAVITGGA-SGLGLATAERLVG-----QGASAVLLDL 44 (265)
T ss_dssp CTTCEEEEETTT-SHHHHHHHHHHHH-----TTCEEEEEEC
T ss_pred CCCCEEEEECCC-ChHHHHHHHHHHH-----CCCEEEEEeC
Confidence 345899999994 9999 99999999 8999887643
No 141
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Probab=55.90 E-value=10 Score=36.77 Aligned_cols=35 Identities=6% Similarity=-0.038 Sum_probs=28.9
Q ss_pred CCCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEeccC
Q 006689 34 LNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGLD 74 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~D 74 (635)
+..|-|+||||- +||| .+.+.|.. +|++|...-.+
T Consensus 13 l~~k~vlVTGas-~gIG~~ia~~l~~-----~G~~V~~~~r~ 48 (247)
T 1uzm_A 13 FVSRSVLVTGGN-RGIGLAIAQRLAA-----DGHKVAVTHRG 48 (247)
T ss_dssp CCCCEEEETTTT-SHHHHHHHHHHHH-----TTCEEEEEESS
T ss_pred CCCCEEEEeCCC-CHHHHHHHHHHHH-----CCCEEEEEeCC
Confidence 446889999985 8999 99999999 99999876443
No 142
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=55.75 E-value=10 Score=36.81 Aligned_cols=32 Identities=13% Similarity=0.062 Sum_probs=27.1
Q ss_pred CCCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEe
Q 006689 34 LNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLF 71 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~ 71 (635)
++.|.++||||- +||| .+.+.|-. +|++|...
T Consensus 2 l~~k~vlVTGas-~giG~~ia~~l~~-----~G~~V~~~ 34 (255)
T 2q2v_A 2 LKGKTALVTGST-SGIGLGIAQVLAR-----AGANIVLN 34 (255)
T ss_dssp CTTCEEEESSCS-SHHHHHHHHHHHH-----TTCEEEEE
T ss_pred CCCCEEEEeCCC-cHHHHHHHHHHHH-----CCCEEEEE
Confidence 345889999985 8999 99999999 89998774
No 143
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=55.64 E-value=9.3 Score=36.93 Aligned_cols=33 Identities=21% Similarity=0.166 Sum_probs=26.6
Q ss_pred CCCeEEEEccccccchh-hHHHHHHhcCcCCCCce-eEEec
Q 006689 34 LNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTH-FNLFG 72 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~-v~~~K 72 (635)
++.|-++|||| -|||| .+.+.|-. +|++ |...-
T Consensus 3 l~~k~vlVtGa-s~gIG~~~a~~l~~-----~G~~~v~~~~ 37 (254)
T 1sby_A 3 LTNKNVIFVAA-LGGIGLDTSRELVK-----RNLKNFVILD 37 (254)
T ss_dssp CTTCEEEEETT-TSHHHHHHHHHHHH-----TCCSEEEEEE
T ss_pred CCCcEEEEECC-CChHHHHHHHHHHH-----CCCcEEEEEe
Confidence 34578999998 59999 99999999 8986 76643
No 144
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=55.62 E-value=8.8 Score=36.84 Aligned_cols=32 Identities=9% Similarity=-0.095 Sum_probs=27.3
Q ss_pred CCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEec
Q 006689 35 NLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFG 72 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K 72 (635)
+.|.++||||- +||| .+.+.|-. +|++|...-
T Consensus 4 ~~k~vlITGas-~gIG~~~a~~l~~-----~G~~v~~~~ 36 (247)
T 3lyl_A 4 NEKVALVTGAS-RGIGFEVAHALAS-----KGATVVGTA 36 (247)
T ss_dssp TTCEEEESSCS-SHHHHHHHHHHHH-----TTCEEEEEE
T ss_pred CCCEEEEECCC-ChHHHHHHHHHHH-----CCCEEEEEe
Confidence 46889999985 9999 99999999 899987653
No 145
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=55.60 E-value=9.5 Score=36.72 Aligned_cols=32 Identities=6% Similarity=0.090 Sum_probs=26.9
Q ss_pred CCCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEe
Q 006689 34 LNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLF 71 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~ 71 (635)
++.|.|+||||- ++|| .+.+.|-. +|++|..+
T Consensus 12 ~~~k~vlITGas-ggiG~~~a~~l~~-----~G~~V~~~ 44 (265)
T 1h5q_A 12 FVNKTIIVTGGN-RGIGLAFTRAVAA-----AGANVAVI 44 (265)
T ss_dssp CTTEEEEEETTT-SHHHHHHHHHHHH-----TTEEEEEE
T ss_pred cCCCEEEEECCC-chHHHHHHHHHHH-----CCCeEEEE
Confidence 456899999984 8999 89999988 89988765
No 146
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=55.41 E-value=9.1 Score=36.61 Aligned_cols=34 Identities=12% Similarity=0.079 Sum_probs=28.1
Q ss_pred CCCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEecc
Q 006689 34 LNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGL 73 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~ 73 (635)
++.|.|+|||| -++|| .+.+.|-. +|++|...-.
T Consensus 4 ~~~k~vlVtGa-sggiG~~~a~~l~~-----~G~~V~~~~r 38 (251)
T 1zk4_A 4 LDGKVAIITGG-TLGIGLAIATKFVE-----EGAKVMITGR 38 (251)
T ss_dssp TTTCEEEETTT-TSHHHHHHHHHHHH-----TTCEEEEEES
T ss_pred CCCcEEEEeCC-CChHHHHHHHHHHH-----CCCEEEEEeC
Confidence 45688999998 58999 99999999 8999887543
No 147
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=55.37 E-value=8.8 Score=37.38 Aligned_cols=33 Identities=9% Similarity=0.072 Sum_probs=27.6
Q ss_pred CCCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEec
Q 006689 34 LNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFG 72 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K 72 (635)
++.|.++||||- +||| .+.+.|-. +|++|...-
T Consensus 5 l~~k~vlVTGas-~gIG~~ia~~l~~-----~G~~V~~~~ 38 (263)
T 3ai3_A 5 ISGKVAVITGSS-SGIGLAIAEGFAK-----EGAHIVLVA 38 (263)
T ss_dssp CTTCEEEEESCS-SHHHHHHHHHHHH-----TTCEEEEEE
T ss_pred CCCCEEEEECCC-chHHHHHHHHHHH-----CCCEEEEEc
Confidence 345889999986 9999 99999999 899988753
No 148
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=55.36 E-value=8.9 Score=37.60 Aligned_cols=34 Identities=6% Similarity=0.114 Sum_probs=28.3
Q ss_pred CCCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEecc
Q 006689 34 LNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGL 73 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~ 73 (635)
++.|.++||||- +||| .+.+.|-. +|++|...=.
T Consensus 4 ~~~k~vlVTGas-~gIG~~ia~~l~~-----~G~~V~~~~r 38 (278)
T 1spx_A 4 FAEKVAIITGSS-NGIGRATAVLFAR-----EGAKVTITGR 38 (278)
T ss_dssp TTTCEEEETTTT-SHHHHHHHHHHHH-----TTCEEEEEES
T ss_pred CCCCEEEEeCCC-chHHHHHHHHHHH-----CCCEEEEEeC
Confidence 446889999986 8999 99999989 8999887533
No 149
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=55.33 E-value=8.2 Score=37.88 Aligned_cols=29 Identities=10% Similarity=0.013 Sum_probs=25.7
Q ss_pred CeEEEEccccccchh-hHHHHHHhcCcCCCCceeEE
Q 006689 36 LQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNL 70 (635)
Q Consensus 36 ~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~ 70 (635)
.|.++||||- |||| .+.+.|-. +|++|..
T Consensus 25 ~k~vlITGas-~gIG~~~a~~l~~-----~G~~v~~ 54 (269)
T 3gk3_A 25 KRVAFVTGGM-GGLGAAISRRLHD-----AGMAVAV 54 (269)
T ss_dssp CCEEEETTTT-SHHHHHHHHHHHT-----TTCEEEE
T ss_pred CCEEEEECCC-chHHHHHHHHHHH-----CCCEEEE
Confidence 5899999986 9999 99999999 8998865
No 150
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=55.28 E-value=9.4 Score=36.71 Aligned_cols=32 Identities=9% Similarity=0.052 Sum_probs=27.7
Q ss_pred CCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEec
Q 006689 35 NLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFG 72 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K 72 (635)
+-|.|+||||- +||| .+.+.|-. +|++|...-
T Consensus 13 ~~k~vlVTGas-~gIG~~~a~~l~~-----~G~~V~~~~ 45 (249)
T 3f9i_A 13 TGKTSLITGAS-SGIGSAIARLLHK-----LGSKVIISG 45 (249)
T ss_dssp TTCEEEETTTT-SHHHHHHHHHHHH-----TTCEEEEEE
T ss_pred CCCEEEEECCC-ChHHHHHHHHHHH-----CCCEEEEEc
Confidence 46899999994 8999 99999999 999998753
No 151
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=55.21 E-value=9 Score=37.57 Aligned_cols=30 Identities=3% Similarity=0.004 Sum_probs=25.9
Q ss_pred CCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEE
Q 006689 35 NLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNL 70 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~ 70 (635)
+.|.++|||| -|||| ++.+.|-. +|++|..
T Consensus 25 ~~k~vlITGa-s~gIG~a~a~~l~~-----~G~~V~~ 55 (272)
T 4e3z_A 25 DTPVVLVTGG-SRGIGAAVCRLAAR-----QGWRVGV 55 (272)
T ss_dssp CSCEEEETTT-TSHHHHHHHHHHHH-----TTCEEEE
T ss_pred CCCEEEEECC-CchHHHHHHHHHHH-----CCCEEEE
Confidence 3689999998 58999 99999999 8998855
No 152
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=55.12 E-value=9.1 Score=36.80 Aligned_cols=30 Identities=7% Similarity=-0.031 Sum_probs=26.2
Q ss_pred CCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEE
Q 006689 35 NLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNL 70 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~ 70 (635)
+.|.++||||- |||| .+.+.|-. +|++|..
T Consensus 6 ~~k~vlITGas-~gIG~~~a~~l~~-----~G~~v~~ 36 (255)
T 3icc_A 6 KGKVALVTGAS-RGIGRAIAKRLAN-----DGALVAI 36 (255)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHH-----TTCEEEE
T ss_pred CCCEEEEECCC-ChHHHHHHHHHHH-----CCCeEEE
Confidence 45899999996 9999 99999999 8998866
No 153
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=55.11 E-value=8.9 Score=37.18 Aligned_cols=33 Identities=3% Similarity=-0.125 Sum_probs=27.6
Q ss_pred CCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEecc
Q 006689 35 NLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGL 73 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~ 73 (635)
+.|.|+|||| -++|| .+.+.|-. +|++|...-.
T Consensus 13 ~~k~vlITGa-sggiG~~la~~l~~-----~G~~V~~~~r 46 (266)
T 1xq1_A 13 KAKTVLVTGG-TKGIGHAIVEEFAG-----FGAVIHTCAR 46 (266)
T ss_dssp TTCEEEETTT-TSHHHHHHHHHHHH-----TTCEEEEEES
T ss_pred CCCEEEEECC-CCHHHHHHHHHHHH-----CCCEEEEEeC
Confidence 4588999999 68999 99999988 8998887643
No 154
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=55.09 E-value=9.2 Score=37.56 Aligned_cols=32 Identities=3% Similarity=-0.136 Sum_probs=27.3
Q ss_pred CCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEec
Q 006689 35 NLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFG 72 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K 72 (635)
..|-++||||- +||| .+.+.|-. +|++|...-
T Consensus 4 ~~k~vlVTGas-~gIG~~~a~~l~~-----~G~~V~~~~ 36 (281)
T 3m1a_A 4 SAKVWLVTGAS-SGFGRAIAEAAVA-----AGDTVIGTA 36 (281)
T ss_dssp CCCEEEETTTT-SHHHHHHHHHHHH-----TTCEEEEEE
T ss_pred CCcEEEEECCC-ChHHHHHHHHHHH-----CCCEEEEEe
Confidence 46899999995 8999 89999989 899988753
No 155
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=55.00 E-value=7.8 Score=38.32 Aligned_cols=32 Identities=6% Similarity=0.016 Sum_probs=27.7
Q ss_pred CCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEec
Q 006689 35 NLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFG 72 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K 72 (635)
+.|.++||||- |||| .+.+.|-. +|++|...-
T Consensus 15 ~~k~vlVTGas-~gIG~aia~~l~~-----~G~~V~~~~ 47 (266)
T 3p19_A 15 MKKLVVITGAS-SGIGEAIARRFSE-----EGHPLLLLA 47 (266)
T ss_dssp CCCEEEEESTT-SHHHHHHHHHHHH-----TTCCEEEEE
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHH-----CCCEEEEEE
Confidence 46899999995 9999 99999999 999998753
No 156
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=55.00 E-value=10 Score=36.69 Aligned_cols=34 Identities=12% Similarity=0.084 Sum_probs=28.6
Q ss_pred CCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEeccC
Q 006689 35 NLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGLD 74 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~D 74 (635)
+.|.++||||- +||| .+.+.|-. +|++|...-.+
T Consensus 6 ~~k~vlVTGas-~giG~~ia~~l~~-----~G~~V~~~~r~ 40 (250)
T 2fwm_X 6 SGKNVWVTGAG-KGIGYATALAFVE-----AGAKVTGFDQA 40 (250)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHH-----TTCEEEEEESC
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHH-----CCCEEEEEeCc
Confidence 45889999985 9999 99999999 99999886544
No 157
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=54.91 E-value=9.3 Score=36.39 Aligned_cols=33 Identities=12% Similarity=0.051 Sum_probs=27.3
Q ss_pred CCCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEec
Q 006689 34 LNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFG 72 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K 72 (635)
++.|.|+|||| -++|| .+.+.|-. +|++|...-
T Consensus 5 ~~~~~vlVtGa-sggiG~~la~~l~~-----~G~~V~~~~ 38 (248)
T 2pnf_A 5 LQGKVSLVTGS-TRGIGRAIAEKLAS-----AGSTVIITG 38 (248)
T ss_dssp CTTCEEEETTC-SSHHHHHHHHHHHH-----TTCEEEEEE
T ss_pred cCCCEEEEECC-CchHHHHHHHHHHH-----CCCEEEEEe
Confidence 34588999998 58999 99999988 899987753
No 158
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=54.86 E-value=10 Score=36.90 Aligned_cols=32 Identities=13% Similarity=0.020 Sum_probs=27.0
Q ss_pred CCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEec
Q 006689 35 NLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFG 72 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K 72 (635)
+.|.++|||| -+||| .+.+.|-. +|++|...-
T Consensus 3 ~~k~vlVTGa-s~gIG~~ia~~l~~-----~G~~V~~~~ 35 (260)
T 1x1t_A 3 KGKVAVVTGS-TSGIGLGIATALAA-----QGADIVLNG 35 (260)
T ss_dssp TTCEEEETTC-SSHHHHHHHHHHHH-----TTCEEEEEC
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHH-----cCCEEEEEe
Confidence 4588999998 58999 99999999 899988753
No 159
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=54.85 E-value=9.5 Score=38.80 Aligned_cols=33 Identities=6% Similarity=0.010 Sum_probs=28.1
Q ss_pred CCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEecc
Q 006689 35 NLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGL 73 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~ 73 (635)
..|.|+||||- |||| .|.+.|-. +|++|...=.
T Consensus 7 ~~k~vlVTGas-~gIG~~la~~l~~-----~G~~Vv~~~r 40 (319)
T 3ioy_A 7 AGRTAFVTGGA-NGVGIGLVRQLLN-----QGCKVAIADI 40 (319)
T ss_dssp TTCEEEEETTT-STHHHHHHHHHHH-----TTCEEEEEES
T ss_pred CCCEEEEcCCc-hHHHHHHHHHHHH-----CCCEEEEEEC
Confidence 45899999997 9999 89999999 9999887543
No 160
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=54.85 E-value=9.5 Score=37.59 Aligned_cols=34 Identities=3% Similarity=-0.011 Sum_probs=28.9
Q ss_pred CCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEeccC
Q 006689 35 NLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGLD 74 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~D 74 (635)
+-|.++||||- |||| .+.+.|-. +|++|...-.+
T Consensus 9 ~~k~~lVTGas-~gIG~a~a~~l~~-----~G~~V~~~~r~ 43 (281)
T 3s55_A 9 EGKTALITGGA-RGMGRSHAVALAE-----AGADIAICDRC 43 (281)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHH-----TTCEEEEEECC
T ss_pred CCCEEEEeCCC-chHHHHHHHHHHH-----CCCeEEEEeCC
Confidence 45899999985 9999 99999999 99999886544
No 161
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=54.77 E-value=9.2 Score=37.98 Aligned_cols=35 Identities=6% Similarity=-0.021 Sum_probs=29.1
Q ss_pred CCCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEeccC
Q 006689 34 LNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGLD 74 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~D 74 (635)
++-|-++||||- |||| .+.+.|-. +|++|...-.+
T Consensus 14 l~gk~vlVTGas-~gIG~~~a~~L~~-----~G~~V~~~~r~ 49 (291)
T 3rd5_A 14 FAQRTVVITGAN-SGLGAVTARELAR-----RGATVIMAVRD 49 (291)
T ss_dssp CTTCEEEEECCS-SHHHHHHHHHHHH-----TTCEEEEEESC
T ss_pred CCCCEEEEeCCC-ChHHHHHHHHHHH-----CCCEEEEEECC
Confidence 346899999997 9999 99999999 89999876443
No 162
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=54.70 E-value=9.9 Score=37.70 Aligned_cols=32 Identities=9% Similarity=-0.011 Sum_probs=27.1
Q ss_pred CCCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEe
Q 006689 34 LNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLF 71 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~ 71 (635)
++-|.++||||- +||| .+.+.|-. +|++|...
T Consensus 29 l~gk~~lVTGas-~GIG~aia~~la~-----~G~~V~~~ 61 (273)
T 3uf0_A 29 LAGRTAVVTGAG-SGIGRAIAHGYAR-----AGAHVLAW 61 (273)
T ss_dssp CTTCEEEEETTT-SHHHHHHHHHHHH-----TTCEEEEE
T ss_pred CCCCEEEEeCCC-cHHHHHHHHHHHH-----CCCEEEEE
Confidence 346899999995 8999 99999999 89988764
No 163
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=54.62 E-value=9.1 Score=37.60 Aligned_cols=32 Identities=6% Similarity=0.052 Sum_probs=27.5
Q ss_pred CCCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEe
Q 006689 34 LNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLF 71 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~ 71 (635)
++-|.++||||- |||| ++.+.|-. +|++|...
T Consensus 9 l~~k~vlVTGas-~GIG~aia~~la~-----~G~~V~~~ 41 (262)
T 3ksu_A 9 LKNKVIVIAGGI-KNLGALTAKTFAL-----ESVNLVLH 41 (262)
T ss_dssp CTTCEEEEETCS-SHHHHHHHHHHTT-----SSCEEEEE
T ss_pred CCCCEEEEECCC-chHHHHHHHHHHH-----CCCEEEEE
Confidence 446899999996 9999 99999999 89988764
No 164
>2ffh_A Protein (FFH); SRP54, signal recognition particle, GTPase, M domain, RNA-binding, signal sequence-binding, helix-turn-helix, protein targeting; 3.20A {Thermus aquaticus} SCOP: a.24.13.1 a.36.1.1 c.37.1.10 PDB: 2iy3_A
Probab=54.62 E-value=74 Score=34.24 Aligned_cols=36 Identities=14% Similarity=0.038 Sum_probs=29.6
Q ss_pred CCeEEEEccccccchh------hHHHHHHhcCcCCCCceeEEeccCCcc
Q 006689 35 NLQYMFLCLNECACIN------FFSLFLVQNCQYHPNTHFNLFGLDPYL 77 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg------s~g~ll~~~~~~~~g~~v~~~K~DpYl 77 (635)
+.+.|.++| . +|.| .|+.+|+. +|.+|..+..|+|-
T Consensus 97 ~~~vi~i~G-~-~GsGKTT~~~~LA~~l~~-----~g~~Vllvd~D~~r 138 (425)
T 2ffh_A 97 DRNLWFLVG-L-QGSGKTTTAAKLALYYKG-----KGRRPLLVAADTQR 138 (425)
T ss_dssp SSEEEEEEC-C-TTSSHHHHHHHHHHHHHT-----TTCCEEEEECCSSC
T ss_pred CCeEEEEEC-C-CCCCHHHHHHHHHHHHHH-----cCCeEEEeeccccC
Confidence 457788885 3 8999 78888888 89999999999874
No 165
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=54.61 E-value=9.1 Score=37.44 Aligned_cols=33 Identities=6% Similarity=0.087 Sum_probs=27.7
Q ss_pred CCCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEec
Q 006689 34 LNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFG 72 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K 72 (635)
+..|.++|||| -+||| .+.+.|-. +|++|...-
T Consensus 11 l~~k~vlVTGa-s~gIG~~ia~~l~~-----~G~~V~~~~ 44 (267)
T 1iy8_A 11 FTDRVVLITGG-GSGLGRATAVRLAA-----EGAKLSLVD 44 (267)
T ss_dssp CTTCEEEEETT-TSHHHHHHHHHHHH-----TTCEEEEEE
T ss_pred CCCCEEEEECC-CCHHHHHHHHHHHH-----CCCEEEEEe
Confidence 34589999998 59999 99999999 899987753
No 166
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=54.58 E-value=6.3 Score=38.78 Aligned_cols=34 Identities=6% Similarity=-0.132 Sum_probs=28.7
Q ss_pred CCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEeccC
Q 006689 35 NLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGLD 74 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~D 74 (635)
+.|.++||||- +||| .+.+.|-. +|++|...-.+
T Consensus 27 ~~k~vlVTGas-~gIG~aia~~l~~-----~G~~V~~~~r~ 61 (260)
T 3un1_A 27 QQKVVVITGAS-QGIGAGLVRAYRD-----RNYRVVATSRS 61 (260)
T ss_dssp TCCEEEESSCS-SHHHHHHHHHHHH-----TTCEEEEEESS
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHH-----CCCEEEEEeCC
Confidence 35899999985 8999 99999999 99999886443
No 167
>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}
Probab=54.50 E-value=8.8 Score=37.06 Aligned_cols=30 Identities=7% Similarity=-0.117 Sum_probs=25.7
Q ss_pred CeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEe
Q 006689 36 LQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLF 71 (635)
Q Consensus 36 ~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~ 71 (635)
.|.++||||- +||| .+.+.|-. +|++|...
T Consensus 1 ~k~vlVTGas-~gIG~~ia~~l~~-----~G~~V~~~ 31 (244)
T 1zmo_A 1 MVIALVTHAR-HFAGPAAVEALTQ-----DGYTVVCH 31 (244)
T ss_dssp -CEEEESSTT-STTHHHHHHHHHH-----TTCEEEEC
T ss_pred CCEEEEECCC-ChHHHHHHHHHHH-----CCCEEEEe
Confidence 3779999985 9999 99999999 99998875
No 168
>3fkq_A NTRC-like two-domain protein; RER070207001320, structural GE joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: ATP 2PE; 2.10A {Eubacterium rectale}
Probab=54.37 E-value=43 Score=34.74 Aligned_cols=40 Identities=5% Similarity=0.063 Sum_probs=33.2
Q ss_pred CCCeEEEEccccccchh------hHHHHHHhcCcCCCCceeEEeccCCcccc
Q 006689 34 LNLQYMFLCLNECACIN------FFSLFLVQNCQYHPNTHFNLFGLDPYLNT 79 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg------s~g~ll~~~~~~~~g~~v~~~K~DpYlN~ 79 (635)
.++|.|.|++| -.|.| .++..|.. +|++|-.+-+||+-|+
T Consensus 141 ~~~kvIav~s~-KGGvGKTT~a~nLA~~La~-----~g~rVlliD~D~~~~l 186 (373)
T 3fkq_A 141 DKSSVVIFTSP-CGGVGTSTVAAACAIAHAN-----MGKKVFYLNIEQCGTT 186 (373)
T ss_dssp TSCEEEEEECS-STTSSHHHHHHHHHHHHHH-----HTCCEEEEECCTTCCH
T ss_pred CCceEEEEECC-CCCChHHHHHHHHHHHHHh-----CCCCEEEEECCCCCCH
Confidence 35899999987 67888 78888888 8999999999976554
No 169
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=54.36 E-value=9.4 Score=36.59 Aligned_cols=32 Identities=6% Similarity=-0.057 Sum_probs=27.1
Q ss_pred CCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEec
Q 006689 35 NLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFG 72 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K 72 (635)
+.|.++||||- ++|| .+.+.|-. +|++|..+-
T Consensus 10 ~~k~vlITGas-ggiG~~la~~l~~-----~G~~V~~~~ 42 (254)
T 2wsb_A 10 DGACAAVTGAG-SGIGLEICRAFAA-----SGARLILID 42 (254)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHH-----TTCEEEEEE
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHH-----CCCEEEEEe
Confidence 45889999985 8999 99999999 899988753
No 170
>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=54.25 E-value=9.7 Score=36.73 Aligned_cols=35 Identities=11% Similarity=0.114 Sum_probs=28.6
Q ss_pred CCCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEeccC
Q 006689 34 LNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGLD 74 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~D 74 (635)
++.|.++||||- +||| .+.+.|-. +|++|...-.+
T Consensus 4 l~~k~vlVTGas-~gIG~~ia~~l~~-----~G~~V~~~~r~ 39 (246)
T 2ag5_A 4 LDGKVIILTAAA-QGIGQAAALAFAR-----EGAKVIATDIN 39 (246)
T ss_dssp TTTCEEEESSTT-SHHHHHHHHHHHH-----TTCEEEEEESC
T ss_pred CCCCEEEEeCCC-cHHHHHHHHHHHH-----CCCEEEEEECC
Confidence 445889999985 8999 99999999 99999876443
No 171
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=54.14 E-value=12 Score=36.25 Aligned_cols=34 Identities=9% Similarity=-0.094 Sum_probs=28.5
Q ss_pred CCCCeEEEEcccc-ccchh-hHHHHHHhcCcCCCCceeEEe
Q 006689 33 PLNLQYMFLCLNE-CACIN-FFSLFLVQNCQYHPNTHFNLF 71 (635)
Q Consensus 33 ~~~~k~i~vtggv-~s~lg-s~g~ll~~~~~~~~g~~v~~~ 71 (635)
+.+.|.|+||||- -+||| .+.+.|-. +|++|...
T Consensus 11 ~~~~k~vlITGa~~~~giG~~ia~~l~~-----~G~~V~~~ 46 (271)
T 3ek2_A 11 FLDGKRILLTGLLSNRSIAYGIAKACKR-----EGAELAFT 46 (271)
T ss_dssp TTTTCEEEECCCCSTTSHHHHHHHHHHH-----TTCEEEEE
T ss_pred ccCCCEEEEeCCCCCCcHHHHHHHHHHH-----cCCCEEEE
Confidence 3457999999995 37999 99999999 99998775
No 172
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=54.03 E-value=11 Score=37.11 Aligned_cols=34 Identities=18% Similarity=0.054 Sum_probs=28.5
Q ss_pred CCCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEecc
Q 006689 34 LNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGL 73 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~ 73 (635)
++.|.++||||- |||| .+.+.|-. +|++|...-.
T Consensus 9 l~~k~vlVTGas-~gIG~aia~~l~~-----~G~~V~~~~r 43 (271)
T 3tzq_B 9 LENKVAIITGAC-GGIGLETSRVLAR-----AGARVVLADL 43 (271)
T ss_dssp TTTCEEEEETTT-SHHHHHHHHHHHH-----TTCEEEEEEC
T ss_pred CCCCEEEEECCC-cHHHHHHHHHHHH-----CCCEEEEEcC
Confidence 345899999995 8999 99999999 9999987643
No 173
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=54.01 E-value=8.4 Score=37.91 Aligned_cols=33 Identities=9% Similarity=-0.118 Sum_probs=27.5
Q ss_pred CCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEecc
Q 006689 35 NLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGL 73 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~ 73 (635)
+.|.++||||- |||| .+.+.|-. +|++|...=.
T Consensus 11 ~~k~vlITGas-~GIG~~~a~~L~~-----~G~~V~~~~r 44 (311)
T 3o26_A 11 KRRCAVVTGGN-KGIGFEICKQLSS-----NGIMVVLTCR 44 (311)
T ss_dssp -CCEEEESSCS-SHHHHHHHHHHHH-----TTCEEEEEES
T ss_pred CCcEEEEecCC-chHHHHHHHHHHH-----CCCEEEEEeC
Confidence 46899999996 9999 99999999 8999887533
No 174
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=53.97 E-value=9.3 Score=37.42 Aligned_cols=30 Identities=3% Similarity=0.016 Sum_probs=26.1
Q ss_pred CCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEE
Q 006689 35 NLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNL 70 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~ 70 (635)
+.|.++||||- |||| .+.+.|-. +|++|..
T Consensus 3 ~~k~vlVTGas-~gIG~aia~~l~~-----~G~~vv~ 33 (258)
T 3oid_A 3 QNKCALVTGSS-RGVGKAAAIRLAE-----NGYNIVI 33 (258)
T ss_dssp CCCEEEESSCS-SHHHHHHHHHHHH-----TTCEEEE
T ss_pred CCCEEEEecCC-chHHHHHHHHHHH-----CCCEEEE
Confidence 35899999985 9999 99999999 8999876
No 175
>4fyk_A Deoxyribonucleoside 5'-monophosphate N-glycosidas; hydrolas; HET: SRA; 1.79A {Rattus norvegicus} PDB: 4fyh_A* 4fyi_A* 2klh_A*
Probab=53.92 E-value=33 Score=32.06 Aligned_cols=94 Identities=16% Similarity=0.130 Sum_probs=55.6
Q ss_pred cEEEEEeccCCC-cc--hHHHHHHHHHHccccceeeeEEEEecCCCCCccc---cCCChhhhhHHHHhccCCCEEEECCC
Q 006689 332 VRIAMVGKYTGL-SD--AYLSILKALLHASVDLRKKLVIDWIPACDLEDAT---EKENPDAYKAAWKLLKGADGILVPGG 405 (635)
Q Consensus 332 v~IalVGkY~~l-~D--aY~SI~~AL~~ag~~~~vkl~i~wi~s~~le~~~---~~~~p~~y~~a~~~L~~~DGIllPGG 405 (635)
+||=+.|-.... +| .|..+.+.|+..| .+- . .|+..+.++... ...+..-|..-.+.+..+|.||.-..
T Consensus 3 mkIYlAGP~f~~~e~~~~~~~i~~~L~~~G-~Vl---~-~hv~~~~l~~~g~~~~~~~~~i~~~d~~~i~~aD~vvA~l~ 77 (152)
T 4fyk_A 3 RSVYFCGSIRGGREDQALYARIVSRLRRYG-KVL---T-EHVADAELEPLGEEAAGGDQFIHEQNLNWLQQADVVVAEVT 77 (152)
T ss_dssp CEEEEECCSTTCCTTHHHHHHHHHHHTTTS-EEC---C-CC-------------CCCHHHHHHHHHHHHHHCSEEEEECS
T ss_pred ceEEEECCCCCcHHHHHHHHHHHHHHHHcC-ccc---c-cccCchhhhhccccccCCHHHHHHHHHHHHHHCCEEEEeCC
Confidence 577777776543 23 5788999999998 431 1 456544443221 11122234444455789999887443
Q ss_pred CCCCcchhHHHHHHHHHHcCCCEEEEeh
Q 006689 406 FGNRGVQGKILAAKYAREHRIPYLGICL 433 (635)
Q Consensus 406 fG~rg~eg~i~air~are~~iP~LGICL 433 (635)
....|..--+-+|...++|+++.|.
T Consensus 78 ---~~d~Gt~~EiG~A~algkPV~~l~~ 102 (152)
T 4fyk_A 78 ---QPSLGVGYELGRAVALGKPILCLFR 102 (152)
T ss_dssp ---SCCHHHHHHHHHHHHTTCCEEEEEC
T ss_pred ---CCCCCHHHHHHHHHHcCCeEEEEEe
Confidence 3345667778889999999999987
No 176
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=53.87 E-value=11 Score=37.23 Aligned_cols=33 Identities=12% Similarity=0.131 Sum_probs=28.2
Q ss_pred CCCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEec
Q 006689 34 LNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFG 72 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K 72 (635)
++-|.++||||- |||| ++.+.|-. +|++|...=
T Consensus 4 l~~k~~lVTGas-~GIG~aia~~la~-----~G~~V~~~~ 37 (274)
T 3e03_A 4 LSGKTLFITGAS-RGIGLAIALRAAR-----DGANVAIAA 37 (274)
T ss_dssp CTTCEEEEETTT-SHHHHHHHHHHHH-----TTCEEEEEE
T ss_pred CCCcEEEEECCC-ChHHHHHHHHHHH-----CCCEEEEEe
Confidence 346899999997 9999 99999999 999988753
No 177
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=53.86 E-value=9.8 Score=37.04 Aligned_cols=32 Identities=9% Similarity=-0.042 Sum_probs=27.3
Q ss_pred CCCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEe
Q 006689 34 LNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLF 71 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~ 71 (635)
++.|.++|||| -|||| .+.+.|-. +|++|...
T Consensus 3 l~~k~vlVTGa-s~gIG~~ia~~l~~-----~G~~V~~~ 35 (254)
T 1hdc_A 3 LSGKTVIITGG-ARGLGAEAARQAVA-----AGARVVLA 35 (254)
T ss_dssp CCCSEEEEETT-TSHHHHHHHHHHHH-----TTCEEEEE
T ss_pred CCCCEEEEECC-CcHHHHHHHHHHHH-----CCCEEEEE
Confidence 44688999998 48999 99999999 99998875
No 178
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=53.75 E-value=9.9 Score=37.31 Aligned_cols=34 Identities=9% Similarity=0.063 Sum_probs=28.6
Q ss_pred CCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEeccC
Q 006689 35 NLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGLD 74 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~D 74 (635)
+-|.++||||- |||| .+.+.|-. +|++|..+-.+
T Consensus 9 ~gk~vlVTGas-~gIG~~ia~~l~~-----~G~~V~~~~~~ 43 (287)
T 3pxx_A 9 QDKVVLVTGGA-RGQGRSHAVKLAE-----EGADIILFDIC 43 (287)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHH-----TTCEEEEEECC
T ss_pred CCCEEEEeCCC-ChHHHHHHHHHHH-----CCCeEEEEccc
Confidence 35899999996 8999 99999999 99999886433
No 179
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=53.68 E-value=9 Score=36.97 Aligned_cols=32 Identities=3% Similarity=0.035 Sum_probs=26.6
Q ss_pred CCCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEe
Q 006689 34 LNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLF 71 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~ 71 (635)
++.|.|+||||- ++|| .+.+.|.. +|++|...
T Consensus 5 l~~k~vlITGas-ggiG~~~a~~l~~-----~G~~V~~~ 37 (261)
T 1gee_A 5 LEGKVVVITGSS-TGLGKSMAIRFAT-----EKAKVVVN 37 (261)
T ss_dssp GTTCEEEETTCS-SHHHHHHHHHHHH-----TTCEEEEE
T ss_pred CCCCEEEEeCCC-ChHHHHHHHHHHH-----CCCEEEEE
Confidence 345889999985 8999 99999988 89988764
No 180
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=53.67 E-value=9.9 Score=36.94 Aligned_cols=31 Identities=6% Similarity=-0.072 Sum_probs=27.1
Q ss_pred CCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEe
Q 006689 35 NLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLF 71 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~ 71 (635)
+.|.++||||- |||| .+.+.|-. +|++|...
T Consensus 8 ~gk~~lVTGas-~gIG~a~a~~l~~-----~G~~V~~~ 39 (248)
T 3op4_A 8 EGKVALVTGAS-RGIGKAIAELLAE-----RGAKVIGT 39 (248)
T ss_dssp TTCEEEESSCS-SHHHHHHHHHHHH-----TTCEEEEE
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHH-----CCCEEEEE
Confidence 45899999995 8999 99999999 99998875
No 181
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2
Probab=53.67 E-value=9.8 Score=37.00 Aligned_cols=36 Identities=8% Similarity=0.050 Sum_probs=29.8
Q ss_pred CCCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEeccCC
Q 006689 34 LNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGLDP 75 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~Dp 75 (635)
.+.|.|+||||- |||| .+.+.|-. +|++|...-.++
T Consensus 17 ~~~k~vlVTGas-~gIG~~~a~~l~~-----~G~~V~~~~r~~ 53 (249)
T 1o5i_A 17 IRDKGVLVLAAS-RGIGRAVADVLSQ-----EGAEVTICARNE 53 (249)
T ss_dssp CTTCEEEEESCS-SHHHHHHHHHHHH-----TTCEEEEEESCH
T ss_pred cCCCEEEEECCC-CHHHHHHHHHHHH-----CCCEEEEEcCCH
Confidence 346889999995 8999 99999999 999998875544
No 182
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=53.59 E-value=10 Score=37.09 Aligned_cols=32 Identities=13% Similarity=-0.093 Sum_probs=27.2
Q ss_pred CCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEec
Q 006689 35 NLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFG 72 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K 72 (635)
+.|.++||||- +||| ++.+.|-. +|++|...=
T Consensus 28 ~~k~vlITGas-~gIG~~la~~l~~-----~G~~V~~~~ 60 (262)
T 3rkr_A 28 SGQVAVVTGAS-RGIGAAIARKLGS-----LGARVVLTA 60 (262)
T ss_dssp TTCEEEESSTT-SHHHHHHHHHHHH-----TTCEEEEEE
T ss_pred CCCEEEEECCC-ChHHHHHHHHHHH-----CCCEEEEEE
Confidence 35899999985 9999 99999988 899987753
No 183
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=53.47 E-value=10 Score=36.65 Aligned_cols=30 Identities=10% Similarity=0.039 Sum_probs=25.8
Q ss_pred CCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEE
Q 006689 35 NLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNL 70 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~ 70 (635)
+.|-++||||- |||| .+.+.|-. +|++|..
T Consensus 3 ~~k~~lVTGas-~gIG~~ia~~l~~-----~G~~V~~ 33 (246)
T 3osu_A 3 MTKSALVTGAS-RGIGRSIALQLAE-----EGYNVAV 33 (246)
T ss_dssp CSCEEEETTCS-SHHHHHHHHHHHH-----TTCEEEE
T ss_pred CCCEEEEECCC-ChHHHHHHHHHHH-----CCCEEEE
Confidence 35889999985 8999 99999999 8998865
No 184
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=53.33 E-value=9.9 Score=37.27 Aligned_cols=33 Identities=6% Similarity=0.026 Sum_probs=27.9
Q ss_pred CCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEecc
Q 006689 35 NLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGL 73 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~ 73 (635)
+-|.++||||- |||| ++.+.|-. +|++|...-.
T Consensus 9 ~~k~vlVTGas-~gIG~aia~~l~~-----~G~~V~~~~r 42 (262)
T 3pk0_A 9 QGRSVVVTGGT-KGIGRGIATVFAR-----AGANVAVAGR 42 (262)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHH-----TTCEEEEEES
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHH-----CCCEEEEEeC
Confidence 45899999995 9999 99999999 9999887543
No 185
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}
Probab=53.24 E-value=11 Score=36.99 Aligned_cols=35 Identities=3% Similarity=-0.106 Sum_probs=28.7
Q ss_pred CCCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEeccC
Q 006689 34 LNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGLD 74 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~D 74 (635)
++.|-|+|||| -+||| ++.+.|-. +|++|...-.+
T Consensus 19 l~~k~vlVTGa-s~gIG~aia~~l~~-----~G~~V~~~~r~ 54 (253)
T 2nm0_A 19 HMSRSVLVTGG-NRGIGLAIARAFAD-----AGDKVAITYRS 54 (253)
T ss_dssp -CCCEEEEETT-TSHHHHHHHHHHHH-----TTCEEEEEESS
T ss_pred CCCCEEEEeCC-CCHHHHHHHHHHHH-----CCCEEEEEeCC
Confidence 34688999998 58999 99999999 99999886444
No 186
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=53.18 E-value=10 Score=37.66 Aligned_cols=32 Identities=13% Similarity=-0.061 Sum_probs=27.6
Q ss_pred CCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEec
Q 006689 35 NLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFG 72 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K 72 (635)
+.|.++||||- +||| .+.+.|-. +|++|...-
T Consensus 28 ~gk~vlVTGas-~gIG~aia~~la~-----~G~~V~~~~ 60 (277)
T 3gvc_A 28 AGKVAIVTGAG-AGIGLAVARRLAD-----EGCHVLCAD 60 (277)
T ss_dssp TTCEEEETTTT-STHHHHHHHHHHH-----TTCEEEEEE
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHH-----CCCEEEEEe
Confidence 45899999985 9999 99999999 899998753
No 187
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=53.13 E-value=11 Score=37.47 Aligned_cols=30 Identities=7% Similarity=-0.076 Sum_probs=25.9
Q ss_pred CeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEe
Q 006689 36 LQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLF 71 (635)
Q Consensus 36 ~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~ 71 (635)
.|.++||||- |||| .+.+.|-. +|++|...
T Consensus 29 ~k~~lVTGas-~GIG~aia~~la~-----~G~~V~~~ 59 (280)
T 4da9_A 29 RPVAIVTGGR-RGIGLGIARALAA-----SGFDIAIT 59 (280)
T ss_dssp CCEEEEETTT-SHHHHHHHHHHHH-----TTCEEEEE
T ss_pred CCEEEEecCC-CHHHHHHHHHHHH-----CCCeEEEE
Confidence 4899999984 8999 99999999 89988764
No 188
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=53.08 E-value=9.9 Score=37.59 Aligned_cols=33 Identities=6% Similarity=-0.073 Sum_probs=27.7
Q ss_pred CCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEecc
Q 006689 35 NLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGL 73 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~ 73 (635)
+.|.++||||- +||| .+.+.|.. +|++|...-.
T Consensus 21 ~~k~vlVTGas-~gIG~~ia~~l~~-----~G~~V~~~~r 54 (277)
T 2rhc_B 21 DSEVALVTGAT-SGIGLEIARRLGK-----EGLRVFVCAR 54 (277)
T ss_dssp TSCEEEEETCS-SHHHHHHHHHHHH-----TTCEEEEEES
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHH-----CCCEEEEEeC
Confidence 45899999984 8999 99999999 8999887543
No 189
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=53.07 E-value=10 Score=37.16 Aligned_cols=31 Identities=6% Similarity=-0.091 Sum_probs=26.4
Q ss_pred CCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEe
Q 006689 35 NLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLF 71 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~ 71 (635)
..|.|+||||- |||| .+.+.|-. +|++|..+
T Consensus 28 ~~k~vlITGas-~gIG~~la~~l~~-----~G~~V~~~ 59 (271)
T 4iin_A 28 TGKNVLITGAS-KGIGAEIAKTLAS-----MGLKVWIN 59 (271)
T ss_dssp SCCEEEETTCS-SHHHHHHHHHHHH-----TTCEEEEE
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHH-----CCCEEEEE
Confidence 35899999985 8999 99999989 89988764
No 190
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=52.98 E-value=10 Score=37.04 Aligned_cols=33 Identities=9% Similarity=-0.012 Sum_probs=27.5
Q ss_pred CCCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEec
Q 006689 34 LNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFG 72 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K 72 (635)
++.|.|+|||| -++|| ++.+.|-. +|++|...-
T Consensus 32 l~~k~vlITGa-sggIG~~la~~L~~-----~G~~V~~~~ 65 (279)
T 3ctm_A 32 LKGKVASVTGS-SGGIGWAVAEAYAQ-----AGADVAIWY 65 (279)
T ss_dssp CTTCEEEETTT-TSSHHHHHHHHHHH-----HTCEEEEEE
T ss_pred CCCCEEEEECC-CcHHHHHHHHHHHH-----CCCEEEEEe
Confidence 44689999998 58999 99998888 899888753
No 191
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=52.87 E-value=7 Score=34.33 Aligned_cols=33 Identities=3% Similarity=-0.196 Sum_probs=26.8
Q ss_pred CeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEeccCC
Q 006689 36 LQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGLDP 75 (635)
Q Consensus 36 ~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~Dp 75 (635)
++.|+|+|+ ..+| ++...|.. +|++|..+-.||
T Consensus 6 ~~~v~I~G~--G~iG~~la~~L~~-----~g~~V~~id~~~ 39 (141)
T 3llv_A 6 RYEYIVIGS--EAAGVGLVRELTA-----AGKKVLAVDKSK 39 (141)
T ss_dssp CCSEEEECC--SHHHHHHHHHHHH-----TTCCEEEEESCH
T ss_pred CCEEEEECC--CHHHHHHHHHHHH-----CCCeEEEEECCH
Confidence 566888886 6688 89999999 999998876654
No 192
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=52.79 E-value=9.7 Score=37.78 Aligned_cols=36 Identities=8% Similarity=0.081 Sum_probs=27.8
Q ss_pred cCCCCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEeccC
Q 006689 32 APLNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGLD 74 (635)
Q Consensus 32 ~~~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~D 74 (635)
..|+ |.++|||| -+||| .+.+.|-. +|++|...-.+
T Consensus 18 ~~~~-k~vlVTGa-s~gIG~aia~~La~-----~G~~V~~~~r~ 54 (272)
T 2nwq_A 18 SHMS-STLFITGA-TSGFGEACARRFAE-----AGWSLVLTGRR 54 (272)
T ss_dssp ---C-CEEEESST-TTSSHHHHHHHHHH-----TTCEEEEEESC
T ss_pred CCcC-cEEEEeCC-CCHHHHHHHHHHHH-----CCCEEEEEECC
Confidence 3455 89999998 48999 99999999 99999876433
No 193
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=52.75 E-value=10 Score=36.69 Aligned_cols=33 Identities=3% Similarity=-0.024 Sum_probs=27.6
Q ss_pred CCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEecc
Q 006689 35 NLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGL 73 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~ 73 (635)
+.|.++|||| -|||| .+.+.|-. +|++|...-.
T Consensus 4 ~~k~vlVTGa-s~giG~~ia~~l~~-----~G~~V~~~~r 37 (245)
T 1uls_A 4 KDKAVLITGA-AHGIGRATLELFAK-----EGARLVACDI 37 (245)
T ss_dssp TTCEEEEEST-TSHHHHHHHHHHHH-----TTCEEEEEES
T ss_pred CCCEEEEECC-CCHHHHHHHHHHHH-----CCCEEEEEeC
Confidence 4588999998 48999 99999999 9999987533
No 194
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=52.73 E-value=10 Score=36.78 Aligned_cols=32 Identities=13% Similarity=0.092 Sum_probs=27.4
Q ss_pred CCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEec
Q 006689 35 NLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFG 72 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K 72 (635)
+-|.++||||- +||| .+.+.|-. +|++|...-
T Consensus 11 ~~k~vlVTGas-~gIG~aia~~l~~-----~G~~V~~~~ 43 (252)
T 3f1l_A 11 NDRIILVTGAS-DGIGREAAMTYAR-----YGATVILLG 43 (252)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHH-----TTCEEEEEE
T ss_pred CCCEEEEeCCC-ChHHHHHHHHHHH-----CCCEEEEEe
Confidence 46899999985 8999 99999989 899988753
No 195
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=52.65 E-value=11 Score=37.11 Aligned_cols=34 Identities=12% Similarity=0.036 Sum_probs=28.6
Q ss_pred CCCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEecc
Q 006689 34 LNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGL 73 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~ 73 (635)
+.-|.++||||- +||| .+.+.|-. +|++|..+-.
T Consensus 11 l~gk~vlVTGas-~gIG~~ia~~l~~-----~G~~V~~~~r 45 (278)
T 3sx2_A 11 LTGKVAFITGAA-RGQGRAHAVRLAA-----DGADIIAVDL 45 (278)
T ss_dssp TTTCEEEEESTT-SHHHHHHHHHHHH-----TTCEEEEEEC
T ss_pred CCCCEEEEECCC-ChHHHHHHHHHHH-----CCCeEEEEec
Confidence 456899999985 8999 99999999 9999987643
No 196
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=52.63 E-value=10 Score=36.90 Aligned_cols=33 Identities=12% Similarity=0.162 Sum_probs=27.6
Q ss_pred CCCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEec
Q 006689 34 LNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFG 72 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K 72 (635)
++.|.++||||- +||| .+.+.|-. +|++|...-
T Consensus 5 l~~k~vlVTGas-~gIG~~ia~~l~~-----~G~~V~~~~ 38 (260)
T 2z1n_A 5 IQGKLAVVTAGS-SGLGFASALELAR-----NGARLLLFS 38 (260)
T ss_dssp CTTCEEEEETTT-SHHHHHHHHHHHH-----TTCEEEEEE
T ss_pred CCCCEEEEECCC-chHHHHHHHHHHH-----CCCEEEEEe
Confidence 345889999985 8999 99999999 899988753
No 197
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=52.58 E-value=10 Score=36.50 Aligned_cols=32 Identities=6% Similarity=-0.038 Sum_probs=27.5
Q ss_pred CCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEec
Q 006689 35 NLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFG 72 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K 72 (635)
+.|.++|||| -+||| .+.+.|-. +|++|...-
T Consensus 8 ~~k~vlITGa-s~giG~~~a~~l~~-----~G~~V~~~~ 40 (253)
T 3qiv_A 8 ENKVGIVTGS-GGGIGQAYAEALAR-----EGAAVVVAD 40 (253)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHH-----TTCEEEEEE
T ss_pred CCCEEEEECC-CChHHHHHHHHHHH-----CCCEEEEEc
Confidence 4689999998 48999 99999999 999988753
No 198
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=52.54 E-value=11 Score=36.67 Aligned_cols=32 Identities=6% Similarity=0.022 Sum_probs=27.3
Q ss_pred CCCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEe
Q 006689 34 LNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLF 71 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~ 71 (635)
++.|.++||||- +||| .+.+.|-. +|++|...
T Consensus 4 l~~k~vlVTGas-~giG~~ia~~l~~-----~G~~V~~~ 36 (253)
T 1hxh_A 4 LQGKVALVTGGA-SGVGLEVVKLLLG-----EGAKVAFS 36 (253)
T ss_dssp TTTCEEEETTTT-SHHHHHHHHHHHH-----TTCEEEEE
T ss_pred CCCCEEEEeCCC-cHHHHHHHHHHHH-----CCCEEEEE
Confidence 456889999984 8999 99999999 89998875
No 199
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=52.36 E-value=10 Score=37.10 Aligned_cols=34 Identities=9% Similarity=0.024 Sum_probs=28.4
Q ss_pred CCCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEecc
Q 006689 34 LNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGL 73 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~ 73 (635)
+..|.++||||- |||| .+.+.|-. +|++|...-.
T Consensus 6 l~~k~~lVTGas-~GIG~aia~~l~~-----~G~~V~~~~r 40 (265)
T 3lf2_A 6 LSEAVAVVTGGS-SGIGLATVELLLE-----AGAAVAFCAR 40 (265)
T ss_dssp CTTCEEEEETCS-SHHHHHHHHHHHH-----TTCEEEEEES
T ss_pred cCCCEEEEeCCC-ChHHHHHHHHHHH-----CCCEEEEEeC
Confidence 456899999985 8999 99999999 9999887533
No 200
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=52.27 E-value=11 Score=36.33 Aligned_cols=33 Identities=12% Similarity=0.015 Sum_probs=27.8
Q ss_pred CCCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEec
Q 006689 34 LNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFG 72 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K 72 (635)
++.|.|+|||| -++|| .+.+.|-. +|++|..+-
T Consensus 5 ~~~k~vlITGa-sggiG~~la~~l~~-----~G~~V~~~~ 38 (264)
T 2pd6_A 5 LRSALALVTGA-GSGIGRAVSVRLAG-----EGATVAACD 38 (264)
T ss_dssp CTTCEEEEETT-TSHHHHHHHHHHHH-----TTCEEEEEE
T ss_pred cCCCEEEEECC-CChHHHHHHHHHHH-----CCCEEEEEe
Confidence 45688999998 48999 99999988 899998863
No 201
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=52.21 E-value=10 Score=36.78 Aligned_cols=32 Identities=9% Similarity=0.039 Sum_probs=27.3
Q ss_pred CCCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEe
Q 006689 34 LNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLF 71 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~ 71 (635)
++.|.|+|||| -++|| .+.+.|-. +|++|...
T Consensus 14 l~~k~vlITGa-sggiG~~~a~~l~~-----~G~~V~~~ 46 (278)
T 2bgk_A 14 LQDKVAIITGG-AGGIGETTAKLFVR-----YGAKVVIA 46 (278)
T ss_dssp TTTCEEEEEST-TSHHHHHHHHHHHH-----TTCEEEEE
T ss_pred ccCCEEEEECC-CCHHHHHHHHHHHH-----CCCEEEEE
Confidence 34689999998 58999 99999989 89998875
No 202
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=52.05 E-value=8.3 Score=37.60 Aligned_cols=34 Identities=9% Similarity=-0.043 Sum_probs=28.2
Q ss_pred CCCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEecc
Q 006689 34 LNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGL 73 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~ 73 (635)
++.|.++||||- |||| ++.+.|-. +|++|...-.
T Consensus 5 ~~~k~~lVTGas-~GIG~aia~~l~~-----~G~~V~~~~r 39 (250)
T 3nyw_A 5 KQKGLAIITGAS-QGIGAVIAAGLAT-----DGYRVVLIAR 39 (250)
T ss_dssp CCCCEEEEESTT-SHHHHHHHHHHHH-----HTCEEEEEES
T ss_pred CCCCEEEEECCC-cHHHHHHHHHHHH-----CCCEEEEEEC
Confidence 346899999996 9999 99999988 8998887543
No 203
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=52.04 E-value=10 Score=37.62 Aligned_cols=32 Identities=6% Similarity=-0.024 Sum_probs=27.6
Q ss_pred CCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEec
Q 006689 35 NLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFG 72 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K 72 (635)
+.|.++||||- |||| .+.+.|-. +|++|...-
T Consensus 26 ~~k~vlVTGas-~GIG~aia~~l~~-----~G~~V~~~~ 58 (277)
T 4dqx_A 26 NQRVCIVTGGG-SGIGRATAELFAK-----NGAYVVVAD 58 (277)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHH-----TTCEEEEEE
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHH-----CCCEEEEEe
Confidence 35899999985 9999 99999999 999998753
No 204
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=52.04 E-value=12 Score=36.97 Aligned_cols=32 Identities=13% Similarity=0.118 Sum_probs=27.1
Q ss_pred CCCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEe
Q 006689 34 LNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLF 71 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~ 71 (635)
++-|.++||||- +||| .+.+.|-. +|++|...
T Consensus 25 l~~k~~lVTGas-~GIG~aia~~l~~-----~G~~V~~~ 57 (277)
T 4fc7_A 25 LRDKVAFITGGG-SGIGFRIAEIFMR-----HGCHTVIA 57 (277)
T ss_dssp TTTCEEEEETTT-SHHHHHHHHHHHT-----TTCEEEEE
T ss_pred cCCCEEEEeCCC-chHHHHHHHHHHH-----CCCEEEEE
Confidence 346999999994 8999 99999988 89988774
No 205
>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}
Probab=52.01 E-value=11 Score=37.11 Aligned_cols=32 Identities=6% Similarity=-0.060 Sum_probs=27.7
Q ss_pred CCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEec
Q 006689 35 NLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFG 72 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K 72 (635)
+.|-++||||- |||| ++.+.|-. +|++|...-
T Consensus 27 ~gk~vlVTGas-~gIG~aia~~la~-----~G~~V~~~~ 59 (266)
T 3uxy_A 27 EGKVALVTGAA-GGIGGAVVTALRA-----AGARVAVAD 59 (266)
T ss_dssp TTCEEEESSTT-SHHHHHHHHHHHH-----TTCEEEECS
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHH-----CCCEEEEEe
Confidence 45899999985 8999 99999999 999998753
No 206
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=51.98 E-value=11 Score=36.57 Aligned_cols=34 Identities=18% Similarity=0.184 Sum_probs=28.0
Q ss_pred CCCCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEec
Q 006689 33 PLNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFG 72 (635)
Q Consensus 33 ~~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K 72 (635)
++.-|.++|||| -+||| .+.+.|-. +|++|...-
T Consensus 11 ~l~~k~vlVTGa-s~gIG~~ia~~l~~-----~G~~V~~~~ 45 (260)
T 2zat_A 11 PLENKVALVTAS-TDGIGLAIARRLAQ-----DGAHVVVSS 45 (260)
T ss_dssp TTTTCEEEESSC-SSHHHHHHHHHHHH-----TTCEEEEEE
T ss_pred CCCCCEEEEECC-CcHHHHHHHHHHHH-----CCCEEEEEe
Confidence 344689999998 48999 99999999 899988753
No 207
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=51.94 E-value=11 Score=37.11 Aligned_cols=32 Identities=3% Similarity=-0.051 Sum_probs=27.8
Q ss_pred CCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEec
Q 006689 35 NLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFG 72 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K 72 (635)
.-|.++||||- |||| .+.+.|-. +|++|..+-
T Consensus 10 ~~k~~lVTGas-~GIG~a~a~~la~-----~G~~V~~~~ 42 (277)
T 3tsc_A 10 EGRVAFITGAA-RGQGRAHAVRMAA-----EGADIIAVD 42 (277)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHH-----TTCEEEEEE
T ss_pred CCCEEEEECCc-cHHHHHHHHHHHH-----cCCEEEEEe
Confidence 45899999985 8999 99999999 999998863
No 208
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=51.93 E-value=11 Score=36.58 Aligned_cols=33 Identities=0% Similarity=-0.098 Sum_probs=28.1
Q ss_pred CCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEecc
Q 006689 35 NLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGL 73 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~ 73 (635)
+.|.++||||- +||| ++.+.|-. +|++|.+.-.
T Consensus 8 ~~k~vlITGas-~gIG~~~a~~l~~-----~G~~V~~~~r 41 (261)
T 3n74_A 8 EGKVALITGAG-SGFGEGMAKRFAK-----GGAKVVIVDR 41 (261)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHH-----TTCEEEEEES
T ss_pred CCCEEEEECCC-chHHHHHHHHHHH-----CCCEEEEEcC
Confidence 35899999996 9999 99999999 9999987643
No 209
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=51.90 E-value=14 Score=36.55 Aligned_cols=34 Identities=6% Similarity=-0.083 Sum_probs=28.2
Q ss_pred CCCeEEEEccccc-cchh-hHHHHHHhcCcCCCCceeEEec
Q 006689 34 LNLQYMFLCLNEC-ACIN-FFSLFLVQNCQYHPNTHFNLFG 72 (635)
Q Consensus 34 ~~~k~i~vtggv~-s~lg-s~g~ll~~~~~~~~g~~v~~~K 72 (635)
+..|-++||||-- +||| .+.+.|-. +|++|...-
T Consensus 19 l~~k~vlVTGas~~~gIG~~ia~~l~~-----~G~~V~~~~ 54 (285)
T 2p91_A 19 LEGKRALITGVANERSIAYGIAKSFHR-----EGAQLAFTY 54 (285)
T ss_dssp TTTCEEEECCCSSTTSHHHHHHHHHHH-----TTCEEEEEE
T ss_pred cCCCEEEEECCCCCCcHHHHHHHHHHH-----cCCEEEEEe
Confidence 3458899999964 7999 99999999 899988753
No 210
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=51.85 E-value=11 Score=36.81 Aligned_cols=32 Identities=9% Similarity=0.046 Sum_probs=27.3
Q ss_pred CCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEec
Q 006689 35 NLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFG 72 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K 72 (635)
+.|-++||||- +||| .+.+.|-. +|++|...-
T Consensus 7 ~~k~vlVTGas-~gIG~~ia~~l~~-----~G~~V~~~~ 39 (259)
T 4e6p_A 7 EGKSALITGSA-RGIGRAFAEAYVR-----EGATVAIAD 39 (259)
T ss_dssp TTCEEEEETCS-SHHHHHHHHHHHH-----TTCEEEEEE
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHH-----CCCEEEEEe
Confidence 45889999985 8999 99999999 899998753
No 211
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=51.83 E-value=1.1e+02 Score=27.90 Aligned_cols=94 Identities=11% Similarity=0.042 Sum_probs=53.0
Q ss_pred hHHHHHHHHHhcCCCCccEEEEEeccCCCcchHH---HHHHHHHHccccceeeeEEEEecCCCCCccccCCChhhhhHHH
Q 006689 315 LKEWTSRAEICDGLHEPVRIAMVGKYTGLSDAYL---SILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAW 391 (635)
Q Consensus 315 l~~W~~lv~~~~~~~~~v~IalVGkY~~l~DaY~---SI~~AL~~ag~~~~vkl~i~wi~s~~le~~~~~~~p~~y~~a~ 391 (635)
.+.+.++++.+... -+|.++| .+. ++. .....|.+.|..+.. ++.. +..+....
T Consensus 26 ~~~l~~~~~~i~~a---~~I~i~G-~G~---S~~~a~~~~~~l~~~g~~~~~------~~~~----------~~~~~~~~ 82 (187)
T 3sho_A 26 PEAIEAAVEAICRA---DHVIVVG-MGF---SAAVAVFLGHGLNSLGIRTTV------LTEG----------GSTLTITL 82 (187)
T ss_dssp HHHHHHHHHHHHHC---SEEEEEC-CGG---GHHHHHHHHHHHHHTTCCEEE------ECCC----------THHHHHHH
T ss_pred HHHHHHHHHHHHhC---CEEEEEe-cCc---hHHHHHHHHHHHHhcCCCEEE------ecCC----------chhHHHHH
Confidence 34566677776654 2899998 442 332 223446666655433 2210 11111122
Q ss_pred HhccCCCEEEECCCCCCCcchhHHHHHHHHHHcCCCEEEEeh
Q 006689 392 KLLKGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGICL 433 (635)
Q Consensus 392 ~~L~~~DGIllPGGfG~rg~eg~i~air~are~~iP~LGICL 433 (635)
..+..=|-+|+-.-.|. ....+.+++.|++++.|+.+|+-
T Consensus 83 ~~~~~~d~~i~iS~sG~--t~~~~~~~~~ak~~g~~vi~IT~ 122 (187)
T 3sho_A 83 ANLRPTDLMIGVSVWRY--LRDTVAALAGAAERGVPTMALTD 122 (187)
T ss_dssp HTCCTTEEEEEECCSSC--CHHHHHHHHHHHHTTCCEEEEES
T ss_pred hcCCCCCEEEEEeCCCC--CHHHHHHHHHHHHCCCCEEEEeC
Confidence 23444455554333343 35678999999999999999985
No 212
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=51.76 E-value=14 Score=30.72 Aligned_cols=33 Identities=9% Similarity=0.016 Sum_probs=26.5
Q ss_pred CeEEEEccccccchh-hHHHHHHhcCcCCCC-ceeEEeccCC
Q 006689 36 LQYMFLCLNECACIN-FFSLFLVQNCQYHPN-THFNLFGLDP 75 (635)
Q Consensus 36 ~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g-~~v~~~K~Dp 75 (635)
++-|+|+|+ .++| .+...|.. +| ++|...-.+|
T Consensus 5 ~~~v~I~G~--G~iG~~~~~~l~~-----~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 5 RWNICVVGA--GKIGQMIAALLKT-----SSNYSVTVADHDL 39 (118)
T ss_dssp CEEEEEECC--SHHHHHHHHHHHH-----CSSEEEEEEESCH
T ss_pred cCeEEEECC--CHHHHHHHHHHHh-----CCCceEEEEeCCH
Confidence 566889988 8999 88888988 89 8888765543
No 213
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=51.59 E-value=11 Score=36.71 Aligned_cols=33 Identities=9% Similarity=-0.008 Sum_probs=27.5
Q ss_pred CCCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEec
Q 006689 34 LNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFG 72 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K 72 (635)
+..|.++||||- +||| .+.+.|-. +|++|...-
T Consensus 10 l~~k~vlVTGas-~gIG~~ia~~l~~-----~G~~V~~~~ 43 (263)
T 3ak4_A 10 LSGRKAIVTGGS-KGIGAAIARALDK-----AGATVAIAD 43 (263)
T ss_dssp CTTCEEEEETTT-SHHHHHHHHHHHH-----TTCEEEEEE
T ss_pred CCCCEEEEeCCC-ChHHHHHHHHHHH-----CCCEEEEEe
Confidence 345889999985 8999 99999999 899988753
No 214
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=51.59 E-value=13 Score=36.04 Aligned_cols=78 Identities=17% Similarity=0.255 Sum_probs=54.4
Q ss_pred EEcccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCCcccccCcchHHHHHHHhhhhcCCCCEEEEeeeeeeeecCCCc
Q 006689 146 QVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIESMPFIEALGQFSYRVGPGNFCLIHVSLVPVLNVVGE 225 (635)
Q Consensus 146 QviPHit~~i~~~i~~~~~~pvd~~~~~~dv~i~EiGGTvGdies~pf~ea~rq~~~~~g~~n~~~ihv~~vp~~~~~~e 225 (635)
.|||-|.|+ +.++++- ..++++|++ ++|+++.+. +.+.+++. .| ...|||+.++--|+
T Consensus 11 piI~Avr~~--~~l~~al-------~s~~~~ifl-l~g~i~~l~-----~~v~~lk~-~~--K~v~Vh~Dli~Gls---- 68 (192)
T 3kts_A 11 SIIPAAHNQ--KDMEKIL-------ELDLTYMVM-LETHVAQLK-----ALVKYAQA-GG--KKVLLHADLVNGLK---- 68 (192)
T ss_dssp CEEEEESSS--HHHHHHT-------TSSCCEEEE-CSEETTTHH-----HHHHHHHH-TT--CEEEEEGGGEETCC----
T ss_pred CEEEEecCH--HHHHHHH-------cCCCCEEEE-ecCcHHHHH-----HHHHHHHH-cC--CeEEEecCchhccC----
Confidence 588888775 3456653 345788888 888777654 34455544 44 48999999988663
Q ss_pred cccCCccchhhhhhcCCCcccEEEE
Q 006689 226 QKTKPTQHSVRGLRGQGLTPNILAC 250 (635)
Q Consensus 226 ~KtKptQ~svk~Lrs~Gi~pd~iv~ 250 (635)
+-+.+++.|. .+..||+||=
T Consensus 69 ----~d~~ai~fL~-~~~~pdGIIs 88 (192)
T 3kts_A 69 ----NDDYAIDFLC-TEICPDGIIS 88 (192)
T ss_dssp ----CSHHHHHHHH-HTTCCSEEEE
T ss_pred ----CcHHHHHHHH-hCCCCCEEEe
Confidence 4567887776 4889999874
No 215
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=51.20 E-value=11 Score=37.97 Aligned_cols=31 Identities=6% Similarity=-0.062 Sum_probs=27.2
Q ss_pred CCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEe
Q 006689 35 NLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLF 71 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~ 71 (635)
..|.++||||- |||| ++.+.|-. +|++|...
T Consensus 30 ~gk~vlVTGas-~gIG~~la~~l~~-----~G~~V~~~ 61 (301)
T 3tjr_A 30 DGRAAVVTGGA-SGIGLATATEFAR-----RGARLVLS 61 (301)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHH-----TTCEEEEE
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHH-----CCCEEEEE
Confidence 35899999997 9999 99999999 99998875
No 216
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=51.16 E-value=10 Score=36.81 Aligned_cols=32 Identities=6% Similarity=0.046 Sum_probs=27.3
Q ss_pred CeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEecc
Q 006689 36 LQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGL 73 (635)
Q Consensus 36 ~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~ 73 (635)
.|-++||||- +||| .+.+.|-. +|++|...-.
T Consensus 2 ~k~vlVTGas-~gIG~~ia~~l~~-----~G~~V~~~~r 34 (247)
T 3dii_A 2 NRGVIVTGGG-HGIGKQICLDFLE-----AGDKVCFIDI 34 (247)
T ss_dssp CCEEEEESTT-SHHHHHHHHHHHH-----TTCEEEEEES
T ss_pred CCEEEEECCC-CHHHHHHHHHHHH-----CCCEEEEEeC
Confidence 4789999986 8999 99999999 9999988633
No 217
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=51.10 E-value=9.9 Score=37.40 Aligned_cols=33 Identities=6% Similarity=-0.152 Sum_probs=28.0
Q ss_pred CCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEecc
Q 006689 35 NLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGL 73 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~ 73 (635)
+-|.++||||- |||| ++.+.|-. +|++|...-.
T Consensus 29 ~~k~vlVTGas-~GIG~aia~~l~~-----~G~~Vi~~~r 62 (281)
T 3ppi_A 29 EGASAIVSGGA-GGLGEATVRRLHA-----DGLGVVIADL 62 (281)
T ss_dssp TTEEEEEETTT-SHHHHHHHHHHHH-----TTCEEEEEES
T ss_pred CCCEEEEECCC-ChHHHHHHHHHHH-----CCCEEEEEeC
Confidence 45899999985 9999 99999999 9999987533
No 218
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=51.07 E-value=11 Score=37.33 Aligned_cols=32 Identities=9% Similarity=0.064 Sum_probs=27.2
Q ss_pred CCCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEe
Q 006689 34 LNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLF 71 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~ 71 (635)
++.|.++|||| -+||| .+.+.|.. +|++|...
T Consensus 27 l~~k~vlVTGa-s~gIG~aia~~L~~-----~G~~V~~~ 59 (276)
T 2b4q_A 27 LAGRIALVTGG-SRGIGQMIAQGLLE-----AGARVFIC 59 (276)
T ss_dssp CTTCEEEEETT-TSHHHHHHHHHHHH-----TTCEEEEE
T ss_pred CCCCEEEEeCC-CChHHHHHHHHHHH-----CCCEEEEE
Confidence 34689999998 48999 99999999 89998775
No 219
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=51.00 E-value=11 Score=36.75 Aligned_cols=33 Identities=18% Similarity=0.125 Sum_probs=27.8
Q ss_pred CCCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEec
Q 006689 34 LNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFG 72 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K 72 (635)
++.|.++|||| -+||| .+.+.|-. +|++|...-
T Consensus 5 l~~k~vlVTGa-s~gIG~~ia~~l~~-----~G~~V~~~~ 38 (262)
T 1zem_A 5 FNGKVCLVTGA-GGNIGLATALRLAE-----EGTAIALLD 38 (262)
T ss_dssp TTTCEEEEETT-TSHHHHHHHHHHHH-----TTCEEEEEE
T ss_pred cCCCEEEEeCC-CcHHHHHHHHHHHH-----CCCEEEEEe
Confidence 44688999998 58999 99999999 899988753
No 220
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=50.96 E-value=12 Score=37.98 Aligned_cols=32 Identities=6% Similarity=-0.002 Sum_probs=27.7
Q ss_pred CCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEec
Q 006689 35 NLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFG 72 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K 72 (635)
+.|.++||||- |||| .+.+.|-. +|++|.+.-
T Consensus 26 ~gk~vlVTGas-~GIG~aia~~la~-----~G~~Vv~~~ 58 (322)
T 3qlj_A 26 DGRVVIVTGAG-GGIGRAHALAFAA-----EGARVVVND 58 (322)
T ss_dssp TTCEEEETTTT-SHHHHHHHHHHHH-----TTCEEEEEC
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHH-----CCCEEEEEe
Confidence 35899999986 9999 99999999 899998753
No 221
>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A
Probab=50.93 E-value=12 Score=35.94 Aligned_cols=33 Identities=9% Similarity=-0.018 Sum_probs=27.8
Q ss_pred CeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEeccC
Q 006689 36 LQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGLD 74 (635)
Q Consensus 36 ~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~D 74 (635)
.|.++||||- +||| .+.+.|.. +|++|...-.+
T Consensus 2 ~k~vlVTGas-~giG~~~a~~l~~-----~G~~V~~~~r~ 35 (239)
T 2ekp_A 2 ERKALVTGGS-RGIGRAIAEALVA-----RGYRVAIASRN 35 (239)
T ss_dssp CCEEEEETTT-SHHHHHHHHHHHH-----TTCEEEEEESS
T ss_pred CCEEEEeCCC-cHHHHHHHHHHHH-----CCCEEEEEeCC
Confidence 4789999985 8999 99999999 99999886444
No 222
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=50.90 E-value=11 Score=36.08 Aligned_cols=31 Identities=0% Similarity=-0.085 Sum_probs=26.4
Q ss_pred CeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEec
Q 006689 36 LQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFG 72 (635)
Q Consensus 36 ~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K 72 (635)
.|.++||||- ++|| .+.+.|-. +|++|...-
T Consensus 2 ~k~vlItGas-ggiG~~~a~~l~~-----~G~~V~~~~ 33 (250)
T 2cfc_A 2 SRVAIVTGAS-SGNGLAIATRFLA-----RGDRVAALD 33 (250)
T ss_dssp CCEEEEETTT-SHHHHHHHHHHHH-----TTCEEEEEE
T ss_pred CCEEEEeCCC-chHHHHHHHHHHH-----CCCEEEEEe
Confidence 4789999986 8999 99999988 899888753
No 223
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=50.86 E-value=11 Score=36.83 Aligned_cols=32 Identities=16% Similarity=0.052 Sum_probs=27.3
Q ss_pred CeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEecc
Q 006689 36 LQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGL 73 (635)
Q Consensus 36 ~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~ 73 (635)
-|-++||||- |||| ++.+.|-. +|++|...-.
T Consensus 10 ~k~~lVTGas-~gIG~aia~~l~~-----~G~~V~~~~r 42 (267)
T 3t4x_A 10 GKTALVTGST-AGIGKAIATSLVA-----EGANVLINGR 42 (267)
T ss_dssp TCEEEETTCS-SHHHHHHHHHHHH-----TTCEEEEEES
T ss_pred CCEEEEeCCC-cHHHHHHHHHHHH-----CCCEEEEEeC
Confidence 4889999985 9999 99999999 9999987533
No 224
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=50.79 E-value=12 Score=36.19 Aligned_cols=32 Identities=9% Similarity=-0.114 Sum_probs=26.5
Q ss_pred CCCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEe
Q 006689 34 LNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLF 71 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~ 71 (635)
++.|.|+|||| -++|| .+.+.|.. +|++|..+
T Consensus 19 ~~~k~vlItGa-sggiG~~la~~l~~-----~G~~v~~~ 51 (274)
T 1ja9_A 19 LAGKVALTTGA-GRGIGRGIAIELGR-----RGASVVVN 51 (274)
T ss_dssp TTTCEEEETTT-TSHHHHHHHHHHHH-----TTCEEEEE
T ss_pred CCCCEEEEeCC-CchHHHHHHHHHHH-----CCCEEEEE
Confidence 34588999998 48999 89999999 89988763
No 225
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=50.78 E-value=62 Score=31.03 Aligned_cols=86 Identities=16% Similarity=0.139 Sum_probs=45.0
Q ss_pred CccEEEEEeccCCCcchH-HHHHHHHHHccccceeeeEEEEecCCCCCccccCCChhhhhHHHHhc--cCCCEEEECCCC
Q 006689 330 EPVRIAMVGKYTGLSDAY-LSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGGF 406 (635)
Q Consensus 330 ~~v~IalVGkY~~l~DaY-~SI~~AL~~ag~~~~vkl~i~wi~s~~le~~~~~~~p~~y~~a~~~L--~~~DGIllPGGf 406 (635)
++.+||++-. ...+.| ..+.+.++.+..+.+..+.+ .++.. +++...+..+.+ .++|||++.+..
T Consensus 4 ~~~~Ig~i~~--~~~~~~~~~~~~gi~~~a~~~g~~~~~--~~~~~--------~~~~~~~~~~~l~~~~vdgiIi~~~~ 71 (291)
T 3l49_A 4 EGKTIGITAI--GTDHDWDLKAYQAQIAEIERLGGTAIA--LDAGR--------NDQTQVSQIQTLIAQKPDAIIEQLGN 71 (291)
T ss_dssp TTCEEEEEES--CCSSHHHHHHHHHHHHHHHHTTCEEEE--EECTT--------CHHHHHHHHHHHHHHCCSEEEEESSC
T ss_pred CCcEEEEEeC--CCCChHHHHHHHHHHHHHHHcCCEEEE--EcCCC--------CHHHHHHHHHHHHHcCCCEEEEeCCC
Confidence 4568998843 333444 34555555544444433322 33221 111111222222 589999987642
Q ss_pred CCCcchhHHHHHHHHHHcCCCEEEE
Q 006689 407 GNRGVQGKILAAKYAREHRIPYLGI 431 (635)
Q Consensus 407 G~rg~eg~i~air~are~~iP~LGI 431 (635)
. ......++.+.+.++|+.-+
T Consensus 72 ~----~~~~~~~~~~~~~~iPvV~~ 92 (291)
T 3l49_A 72 L----DVLNPWLQKINDAGIPLFTV 92 (291)
T ss_dssp H----HHHHHHHHHHHHTTCCEEEE
T ss_pred h----hhhHHHHHHHHHCCCcEEEe
Confidence 1 23345677788889998765
No 226
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=50.70 E-value=9.7 Score=37.76 Aligned_cols=32 Identities=13% Similarity=-0.060 Sum_probs=26.2
Q ss_pred CCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEec
Q 006689 35 NLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFG 72 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K 72 (635)
+.|.++||||- |||| .+.+.|-. +|++|...-
T Consensus 23 ~~k~~lVTGas-~GIG~aia~~la~-----~G~~V~~~~ 55 (279)
T 3sju_A 23 RPQTAFVTGVS-SGIGLAVARTLAA-----RGIAVYGCA 55 (279)
T ss_dssp --CEEEEESTT-SHHHHHHHHHHHH-----TTCEEEEEE
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHH-----CCCEEEEEe
Confidence 35899999985 8999 99999999 899987653
No 227
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=50.68 E-value=9.7 Score=37.93 Aligned_cols=32 Identities=6% Similarity=-0.040 Sum_probs=26.5
Q ss_pred CCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEec
Q 006689 35 NLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFG 72 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K 72 (635)
+-|.++||||- |||| .+.+.|-. +|++|...-
T Consensus 32 ~gk~~lVTGas-~GIG~aia~~la~-----~G~~V~~~~ 64 (281)
T 4dry_A 32 EGRIALVTGGG-TGVGRGIAQALSA-----EGYSVVITG 64 (281)
T ss_dssp --CEEEETTTT-SHHHHHHHHHHHH-----TTCEEEEEE
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHH-----CCCEEEEEE
Confidence 46899999985 8999 99999999 899988753
No 228
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=50.66 E-value=11 Score=37.11 Aligned_cols=33 Identities=12% Similarity=0.003 Sum_probs=27.7
Q ss_pred CCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEecc
Q 006689 35 NLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGL 73 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~ 73 (635)
+.|-++|||| -+||| .+.+.|-. +|++|...-.
T Consensus 10 ~~k~vlVTGa-s~gIG~aia~~l~~-----~G~~V~~~~r 43 (281)
T 3svt_A 10 QDRTYLVTGG-GSGIGKGVAAGLVA-----AGASVMIVGR 43 (281)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHH-----TTCEEEEEES
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHH-----CCCEEEEEeC
Confidence 3589999999 59999 99999989 8999887543
No 229
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=50.66 E-value=10 Score=37.85 Aligned_cols=33 Identities=9% Similarity=0.080 Sum_probs=28.2
Q ss_pred CeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEeccC
Q 006689 36 LQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGLD 74 (635)
Q Consensus 36 ~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~D 74 (635)
.|-|+|||| -|||| ++.+.|-. .|.+|...-+|
T Consensus 2 nK~vlVTGa-s~GIG~aia~~la~-----~Ga~V~~~~~~ 35 (247)
T 3ged_A 2 NRGVIVTGG-GHGIGKQICLDFLE-----AGDKVCFIDID 35 (247)
T ss_dssp CCEEEEEST-TSHHHHHHHHHHHH-----TTCEEEEEESC
T ss_pred CCEEEEecC-CCHHHHHHHHHHHH-----CCCEEEEEeCC
Confidence 488999999 49999 99999999 99999886443
No 230
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=50.64 E-value=11 Score=38.46 Aligned_cols=32 Identities=3% Similarity=0.000 Sum_probs=26.3
Q ss_pred CCCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEe
Q 006689 34 LNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLF 71 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~ 71 (635)
|..|.++||||- |||| ++.+.|-. +|++|...
T Consensus 3 m~~k~vlVTGas-~GIG~aia~~L~~-----~G~~V~~~ 35 (324)
T 3u9l_A 3 MSKKIILITGAS-SGFGRLTAEALAG-----AGHRVYAS 35 (324)
T ss_dssp --CCEEEESSCS-SHHHHHHHHHHHH-----TTCEEEEE
T ss_pred CCCCEEEEECCC-cHHHHHHHHHHHH-----CCCEEEEe
Confidence 345899999985 9999 99999999 99998754
No 231
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=50.61 E-value=11 Score=37.31 Aligned_cols=31 Identities=3% Similarity=0.002 Sum_probs=27.1
Q ss_pred CCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEe
Q 006689 35 NLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLF 71 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~ 71 (635)
+.|.++||||- |||| .+.+.|-. +|++|...
T Consensus 4 ~gk~~lVTGas-~GIG~aia~~la~-----~G~~V~~~ 35 (281)
T 3zv4_A 4 TGEVALITGGA-SGLGRALVDRFVA-----EGARVAVL 35 (281)
T ss_dssp TTCEEEEETCS-SHHHHHHHHHHHH-----TTCEEEEE
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHH-----CcCEEEEE
Confidence 45899999986 9999 99999999 99999874
No 232
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=50.55 E-value=12 Score=36.98 Aligned_cols=34 Identities=9% Similarity=-0.027 Sum_probs=29.0
Q ss_pred CCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEeccC
Q 006689 35 NLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGLD 74 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~D 74 (635)
.-|.++||||- |||| .+.+.|-. +|++|...-.+
T Consensus 10 ~~k~~lVTGas-~gIG~aia~~la~-----~G~~V~~~~~~ 44 (286)
T 3uve_A 10 EGKVAFVTGAA-RGQGRSHAVRLAQ-----EGADIIAVDIC 44 (286)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHH-----TTCEEEEEECC
T ss_pred CCCEEEEeCCC-chHHHHHHHHHHH-----CCCeEEEEecc
Confidence 45899999996 8999 99999999 99999886444
No 233
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=50.36 E-value=12 Score=36.91 Aligned_cols=33 Identities=9% Similarity=-0.102 Sum_probs=27.8
Q ss_pred CCCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEec
Q 006689 34 LNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFG 72 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K 72 (635)
++.|.++|||| -+||| .+.+.|-. +|++|...-
T Consensus 19 l~~k~vlVTGa-s~gIG~aia~~l~~-----~G~~V~~~~ 52 (273)
T 1ae1_A 19 LKGTTALVTGG-SKGIGYAIVEELAG-----LGARVYTCS 52 (273)
T ss_dssp CTTCEEEEESC-SSHHHHHHHHHHHH-----TTCEEEEEE
T ss_pred CCCCEEEEECC-cchHHHHHHHHHHH-----CCCEEEEEe
Confidence 34589999998 58999 99999999 899988753
No 234
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=50.31 E-value=9.6 Score=37.52 Aligned_cols=33 Identities=6% Similarity=-0.026 Sum_probs=27.9
Q ss_pred CeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEeccC
Q 006689 36 LQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGLD 74 (635)
Q Consensus 36 ~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~D 74 (635)
.|.++||||- +||| .+.+.|-. +|++|...-.+
T Consensus 27 ~k~vlVTGas-~gIG~aia~~l~~-----~G~~V~~~~r~ 60 (260)
T 3gem_A 27 SAPILITGAS-QRVGLHCALRLLE-----HGHRVIISYRT 60 (260)
T ss_dssp CCCEEESSTT-SHHHHHHHHHHHH-----TTCCEEEEESS
T ss_pred CCEEEEECCC-CHHHHHHHHHHHH-----CCCEEEEEeCC
Confidence 4889999985 9999 99999999 89999886443
No 235
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=50.21 E-value=12 Score=35.55 Aligned_cols=33 Identities=6% Similarity=-0.195 Sum_probs=27.4
Q ss_pred CCCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEec
Q 006689 34 LNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFG 72 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K 72 (635)
++.|-|+|||| -++|| .+.+.|.. +|++|..+-
T Consensus 5 ~~~~~vlVTGa-sggiG~~~a~~l~~-----~G~~V~~~~ 38 (244)
T 1cyd_A 5 FSGLRALVTGA-GKGIGRDTVKALHA-----SGAKVVAVT 38 (244)
T ss_dssp CTTCEEEEEST-TSHHHHHHHHHHHH-----TTCEEEEEE
T ss_pred CCCCEEEEeCC-CchHHHHHHHHHHH-----CCCEEEEEe
Confidence 44578999998 48999 99999999 899988753
No 236
>3k9g_A PF-32 protein; ssgcid, SBRI, decode biostructures, UW, NIH, niaid, borellia burgdorferi, plasmid partition protein, iodide; 2.25A {Borrelia burgdorferi} PDB: 3k9h_A
Probab=50.17 E-value=12 Score=36.40 Aligned_cols=41 Identities=10% Similarity=0.075 Sum_probs=27.9
Q ss_pred CCeEEEEccccccchh--hHHHHHHhcCcCCCCceeEEeccCCccc
Q 006689 35 NLQYMFLCLNECACIN--FFSLFLVQNCQYHPNTHFNLFGLDPYLN 78 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg--s~g~ll~~~~~~~~g~~v~~~K~DpYlN 78 (635)
++|.|.|+++ -.|.| .+...|-.... +|++|-.+.+||.-|
T Consensus 26 ~~~vI~v~s~-kGGvGKTT~a~~LA~~la--~g~~VlliD~D~~~~ 68 (267)
T 3k9g_A 26 KPKIITIASI-KGGVGKSTSAIILATLLS--KNNKVLLIDMDTQAS 68 (267)
T ss_dssp CCEEEEECCS-SSSSCHHHHHHHHHHHHT--TTSCEEEEEECTTCH
T ss_pred CCeEEEEEeC-CCCchHHHHHHHHHHHHH--CCCCEEEEECCCCCC
Confidence 5788888876 47888 33332222122 699999999999754
No 237
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=50.16 E-value=12 Score=35.75 Aligned_cols=33 Identities=12% Similarity=0.181 Sum_probs=27.2
Q ss_pred CCCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEec
Q 006689 34 LNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFG 72 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K 72 (635)
++.|.|+|||| -++|| .+.+.|.. +|++|...-
T Consensus 5 l~~k~vlVTGa-sggiG~~~a~~l~~-----~G~~V~~~~ 38 (258)
T 3afn_B 5 LKGKRVLITGS-SQGIGLATARLFAR-----AGAKVGLHG 38 (258)
T ss_dssp GTTCEEEETTC-SSHHHHHHHHHHHH-----TTCEEEEEE
T ss_pred CCCCEEEEeCC-CChHHHHHHHHHHH-----CCCEEEEEC
Confidence 34578999998 48999 99999999 899987753
No 238
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=50.11 E-value=13 Score=36.55 Aligned_cols=31 Identities=10% Similarity=0.046 Sum_probs=26.8
Q ss_pred CCCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEE
Q 006689 34 LNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNL 70 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~ 70 (635)
++-|.++||||- |||| .+.+.|-. +|++|..
T Consensus 16 l~~k~~lVTGas-~gIG~aia~~l~~-----~G~~V~~ 47 (270)
T 3is3_A 16 LDGKVALVTGSG-RGIGAAVAVHLGR-----LGAKVVV 47 (270)
T ss_dssp CTTCEEEESCTT-SHHHHHHHHHHHH-----TTCEEEE
T ss_pred cCCCEEEEECCC-chHHHHHHHHHHH-----CCCEEEE
Confidence 456899999985 8999 99999999 8998876
No 239
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2
Probab=49.98 E-value=11 Score=38.46 Aligned_cols=31 Identities=6% Similarity=-0.083 Sum_probs=26.9
Q ss_pred CCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEe
Q 006689 35 NLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLF 71 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~ 71 (635)
..|.++||||- +||| .+.+.|-. +|++|.+.
T Consensus 45 ~~k~~lVTGas-~GIG~aia~~La~-----~G~~Vv~~ 76 (328)
T 2qhx_A 45 TVPVALVTGAA-KRLGRSIAEGLHA-----EGYAVCLH 76 (328)
T ss_dssp CCCEEEETTCS-SHHHHHHHHHHHH-----TTCEEEEE
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHH-----CCCEEEEE
Confidence 35899999996 9999 99999999 99998765
No 240
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=49.90 E-value=13 Score=36.81 Aligned_cols=32 Identities=9% Similarity=0.060 Sum_probs=27.7
Q ss_pred CCCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEe
Q 006689 34 LNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLF 71 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~ 71 (635)
++-|.++||||- |||| .+.+.|-. +|++|...
T Consensus 30 l~gk~~lVTGas-~GIG~aia~~la~-----~G~~V~~~ 62 (276)
T 3r1i_A 30 LSGKRALITGAS-TGIGKKVALAYAE-----AGAQVAVA 62 (276)
T ss_dssp CTTCEEEEESTT-SHHHHHHHHHHHH-----TTCEEEEE
T ss_pred CCCCEEEEeCCC-CHHHHHHHHHHHH-----CCCEEEEE
Confidence 445899999996 9999 99999999 99998875
No 241
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=49.84 E-value=12 Score=36.98 Aligned_cols=32 Identities=6% Similarity=-0.059 Sum_probs=27.5
Q ss_pred CCCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEe
Q 006689 34 LNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLF 71 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~ 71 (635)
++.|.++||||- +||| .+.+.|-. +|++|...
T Consensus 24 l~gk~~lVTGas-~gIG~aia~~la~-----~G~~V~~~ 56 (271)
T 4ibo_A 24 LGGRTALVTGSS-RGLGRAMAEGLAV-----AGARILIN 56 (271)
T ss_dssp CTTCEEEETTCS-SHHHHHHHHHHHH-----TTCEEEEC
T ss_pred CCCCEEEEeCCC-cHHHHHHHHHHHH-----CCCEEEEE
Confidence 456899999985 8999 99999999 89998875
No 242
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=49.82 E-value=12 Score=36.74 Aligned_cols=34 Identities=6% Similarity=0.124 Sum_probs=28.0
Q ss_pred CCCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEecc
Q 006689 34 LNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGL 73 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~ 73 (635)
+..|.|+||||- ++|| .+.+.|-. +|++|...-.
T Consensus 29 l~~k~vlITGas-ggIG~~la~~L~~-----~G~~V~~~~r 63 (272)
T 1yb1_A 29 VTGEIVLITGAG-HGIGRLTAYEFAK-----LKSKLVLWDI 63 (272)
T ss_dssp CTTCEEEEETTT-SHHHHHHHHHHHH-----TTCEEEEEES
T ss_pred cCCCEEEEECCC-chHHHHHHHHHHH-----CCCEEEEEEc
Confidence 345899999985 8999 99999999 8999887543
No 243
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=49.65 E-value=11 Score=37.48 Aligned_cols=31 Identities=13% Similarity=0.085 Sum_probs=26.8
Q ss_pred CeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEec
Q 006689 36 LQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFG 72 (635)
Q Consensus 36 ~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K 72 (635)
.|.++||||- |||| ++.+.|-. +|++|...-
T Consensus 28 ~k~~lVTGas-~GIG~aia~~la~-----~G~~V~~~~ 59 (283)
T 3v8b_A 28 SPVALITGAG-SGIGRATALALAA-----DGVTVGALG 59 (283)
T ss_dssp CCEEEEESCS-SHHHHHHHHHHHH-----TTCEEEEEE
T ss_pred CCEEEEECCC-CHHHHHHHHHHHH-----CCCEEEEEe
Confidence 5899999985 8999 99999999 899987753
No 244
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=49.62 E-value=13 Score=36.41 Aligned_cols=33 Identities=12% Similarity=-0.058 Sum_probs=27.9
Q ss_pred CCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEecc
Q 006689 35 NLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGL 73 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~ 73 (635)
+-|.++||||- |||| ++.+.|-. +|++|...-.
T Consensus 7 ~gk~~lVTGas-~gIG~a~a~~l~~-----~G~~V~~~~r 40 (255)
T 4eso_A 7 QGKKAIVIGGT-HGMGLATVRRLVE-----GGAEVLLTGR 40 (255)
T ss_dssp TTCEEEEETCS-SHHHHHHHHHHHH-----TTCEEEEEES
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHH-----CCCEEEEEeC
Confidence 45899999985 8999 99999999 9999987543
No 245
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=49.44 E-value=12 Score=35.72 Aligned_cols=33 Identities=9% Similarity=0.040 Sum_probs=27.2
Q ss_pred CCCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEec
Q 006689 34 LNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFG 72 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K 72 (635)
++.|-|+||||- ++|| .+.+.|-. +|++|..+-
T Consensus 9 ~~~~~vlVtGas-ggiG~~la~~l~~-----~G~~V~~~~ 42 (255)
T 1fmc_A 9 LDGKCAIITGAG-AGIGKEIAITFAT-----AGASVVVSD 42 (255)
T ss_dssp CTTCEEEETTTT-SHHHHHHHHHHHT-----TTCEEEEEE
T ss_pred CCCCEEEEECCc-cHHHHHHHHHHHH-----CCCEEEEEc
Confidence 445889999984 8999 89998888 899988753
No 246
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=49.41 E-value=13 Score=35.99 Aligned_cols=35 Identities=6% Similarity=-0.053 Sum_probs=28.1
Q ss_pred CCCeEEEEccccccchh-hHHHHHHhcCcCCCC---ceeEEeccC
Q 006689 34 LNLQYMFLCLNECACIN-FFSLFLVQNCQYHPN---THFNLFGLD 74 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g---~~v~~~K~D 74 (635)
+++|.|+|||| -++|| .+.+.|-. +| ++|..+-.+
T Consensus 19 ~~~k~vlITGa-sggIG~~la~~L~~-----~G~~~~~V~~~~r~ 57 (267)
T 1sny_A 19 SHMNSILITGC-NRGLGLGLVKALLN-----LPQPPQHLFTTCRN 57 (267)
T ss_dssp -CCSEEEESCC-SSHHHHHHHHHHHT-----SSSCCSEEEEEESC
T ss_pred CCCCEEEEECC-CCcHHHHHHHHHHh-----cCCCCcEEEEEecC
Confidence 35789999999 49999 99998988 88 888876443
No 247
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=49.38 E-value=12 Score=36.83 Aligned_cols=34 Identities=6% Similarity=-0.076 Sum_probs=28.3
Q ss_pred CCCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEecc
Q 006689 34 LNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGL 73 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~ 73 (635)
++.|.++||||- +||| .+.+.|-. +|++|...-.
T Consensus 7 l~~k~vlVTGas-~gIG~~ia~~l~~-----~G~~V~~~~r 41 (270)
T 1yde_A 7 YAGKVVVVTGGG-RGIGAGIVRAFVN-----SGARVVICDK 41 (270)
T ss_dssp TTTCEEEEETCS-SHHHHHHHHHHHH-----TTCEEEEEES
T ss_pred CCCCEEEEECCC-cHHHHHHHHHHHH-----CCCEEEEEeC
Confidence 345889999985 8999 99999999 9999987533
No 248
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=49.38 E-value=11 Score=37.44 Aligned_cols=34 Identities=9% Similarity=-0.048 Sum_probs=27.5
Q ss_pred CCCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEecc
Q 006689 34 LNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGL 73 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~ 73 (635)
++.|.++||||- +||| .+.+.|-. +|++|.+.-.
T Consensus 21 l~~k~~lVTGas-~gIG~aia~~L~~-----~G~~V~~~~r 55 (288)
T 2x9g_A 21 MEAPAAVVTGAA-KRIGRAIAVKLHQ-----TGYRVVIHYH 55 (288)
T ss_dssp -CCCEEEETTCS-SHHHHHHHHHHHH-----HTCEEEEEES
T ss_pred CCCCEEEEeCCC-CHHHHHHHHHHHH-----CCCeEEEEeC
Confidence 345889999985 9999 99998888 8999887543
No 249
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=49.28 E-value=13 Score=36.35 Aligned_cols=32 Identities=9% Similarity=0.032 Sum_probs=26.9
Q ss_pred CCCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEe
Q 006689 34 LNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLF 71 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~ 71 (635)
++.|.++||||- |||| .+.+.|-. +|++|...
T Consensus 6 l~~k~vlVTGas-~GIG~aia~~la~-----~G~~V~~~ 38 (259)
T 3edm_A 6 FTNRTIVVAGAG-RDIGRACAIRFAQ-----EGANVVLT 38 (259)
T ss_dssp TTTCEEEEETTT-SHHHHHHHHHHHH-----TTCEEEEE
T ss_pred CCCCEEEEECCC-chHHHHHHHHHHH-----CCCEEEEE
Confidence 346899999985 8999 99999999 89988764
No 250
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=49.21 E-value=13 Score=37.29 Aligned_cols=35 Identities=6% Similarity=-0.016 Sum_probs=29.2
Q ss_pred CCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEeccCC
Q 006689 35 NLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGLDP 75 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~Dp 75 (635)
+-|.++||||- |||| ++.+.|-. +|++|..+-.++
T Consensus 27 ~gk~~lVTGas-~GIG~aia~~la~-----~G~~V~~~~~~~ 62 (299)
T 3t7c_A 27 EGKVAFITGAA-RGQGRSHAITLAR-----EGADIIAIDVCK 62 (299)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHH-----TTCEEEEEECCS
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHH-----CCCEEEEEeccc
Confidence 35899999985 8999 99999999 999998865443
No 251
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=49.19 E-value=12 Score=36.51 Aligned_cols=33 Identities=6% Similarity=-0.058 Sum_probs=27.4
Q ss_pred CCCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEec
Q 006689 34 LNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFG 72 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K 72 (635)
++.|.++|||| -+||| .+.+.|-. +|++|...-
T Consensus 5 l~~k~vlVTGa-s~gIG~~ia~~l~~-----~G~~V~~~~ 38 (260)
T 1nff_A 5 LTGKVALVSGG-ARGMGASHVRAMVA-----EGAKVVFGD 38 (260)
T ss_dssp TTTCEEEEETT-TSHHHHHHHHHHHH-----TTCEEEEEE
T ss_pred CCCCEEEEeCC-CCHHHHHHHHHHHH-----CCCEEEEEe
Confidence 34588999998 48999 99999999 899988753
No 252
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=49.14 E-value=13 Score=35.44 Aligned_cols=33 Identities=6% Similarity=-0.185 Sum_probs=27.2
Q ss_pred CCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEecc
Q 006689 35 NLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGL 73 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~ 73 (635)
+.|.|+|||| -++|| .+.+.|.. +|++|...-.
T Consensus 6 ~~k~vlITGa-sggiG~~~a~~l~~-----~G~~V~~~~r 39 (244)
T 3d3w_A 6 AGRRVLVTGA-GKGIGRGTVQALHA-----TGARVVAVSR 39 (244)
T ss_dssp TTCEEEEEST-TSHHHHHHHHHHHH-----TTCEEEEEES
T ss_pred CCcEEEEECC-CcHHHHHHHHHHHH-----CCCEEEEEeC
Confidence 3588999998 48999 99999999 8999887543
No 253
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=49.13 E-value=14 Score=37.23 Aligned_cols=34 Identities=3% Similarity=0.022 Sum_probs=28.3
Q ss_pred CCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEeccC
Q 006689 35 NLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGLD 74 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~D 74 (635)
+.|-++||||- +||| .+.+.|-. +|++|...-.+
T Consensus 40 ~~k~vlVTGas-~GIG~aia~~la~-----~G~~V~~~~r~ 74 (293)
T 3rih_A 40 SARSVLVTGGT-KGIGRGIATVFAR-----AGANVAVAARS 74 (293)
T ss_dssp TTCEEEETTTT-SHHHHHHHHHHHH-----TTCEEEEEESS
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHH-----CCCEEEEEECC
Confidence 35899999994 8999 99999999 89999876443
No 254
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=49.09 E-value=14 Score=36.73 Aligned_cols=34 Identities=12% Similarity=0.083 Sum_probs=28.5
Q ss_pred CCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEeccC
Q 006689 35 NLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGLD 74 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~D 74 (635)
+.|.++||||- |||| .+.+.|-. +|++|...-.+
T Consensus 8 ~~k~vlVTGas-~GIG~aia~~l~~-----~G~~V~~~~r~ 42 (285)
T 3sc4_A 8 RGKTMFISGGS-RGIGLAIAKRVAA-----DGANVALVAKS 42 (285)
T ss_dssp TTCEEEEESCS-SHHHHHHHHHHHT-----TTCEEEEEESC
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHH-----CCCEEEEEECC
Confidence 45899999986 9999 99999999 99998876443
No 255
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=49.05 E-value=12 Score=37.20 Aligned_cols=33 Identities=6% Similarity=0.012 Sum_probs=27.9
Q ss_pred CCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEecc
Q 006689 35 NLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGL 73 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~ 73 (635)
.-|.++||||- |||| ++.+.|-. +|++|...-.
T Consensus 7 ~gk~vlVTGas-~GIG~aia~~la~-----~G~~V~~~~r 40 (280)
T 3tox_A 7 EGKIAIVTGAS-SGIGRAAALLFAR-----EGAKVVVTAR 40 (280)
T ss_dssp TTCEEEESSTT-SHHHHHHHHHHHH-----TTCEEEECCS
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHH-----CCCEEEEEEC
Confidence 45889999995 9999 99999999 8999887543
No 256
>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}
Probab=48.71 E-value=9.3 Score=37.15 Aligned_cols=31 Identities=3% Similarity=-0.034 Sum_probs=25.7
Q ss_pred CCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEe
Q 006689 35 NLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLF 71 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~ 71 (635)
+.|.++||||- |||| ++.+.|-. +|++|...
T Consensus 8 ~~k~vlVTGas-~gIG~aia~~l~~-----~G~~V~~~ 39 (257)
T 3tl3_A 8 RDAVAVVTGGA-SGLGLATTKRLLD-----AGAQVVVL 39 (257)
T ss_dssp --CEEEEETTT-SHHHHHHHHHHHH-----HTCEEEEE
T ss_pred cCCEEEEeCCC-CHHHHHHHHHHHH-----CCCEEEEE
Confidence 35899999986 9999 99999988 89998874
No 257
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Probab=48.57 E-value=12 Score=36.31 Aligned_cols=30 Identities=10% Similarity=0.057 Sum_probs=25.7
Q ss_pred eEEEEccccccchh-hHHHHHHhcCcCCCCceeEEec
Q 006689 37 QYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFG 72 (635)
Q Consensus 37 k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K 72 (635)
|.++|||| -+||| .+.+.|-. +|++|...-
T Consensus 1 k~vlVTGa-s~gIG~aia~~l~~-----~G~~V~~~~ 31 (248)
T 3asu_A 1 MIVLVTGA-TAGFGECITRRFIQ-----QGHKVIATG 31 (248)
T ss_dssp CEEEETTT-TSTTHHHHHHHHHH-----TTCEEEEEE
T ss_pred CEEEEECC-CChHHHHHHHHHHH-----CCCEEEEEe
Confidence 56899998 49999 99999999 999998753
No 258
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=48.50 E-value=13 Score=36.76 Aligned_cols=31 Identities=13% Similarity=-0.045 Sum_probs=26.7
Q ss_pred CCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEe
Q 006689 35 NLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLF 71 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~ 71 (635)
+.|.++||||- |||| .+.+.|-. +|++|...
T Consensus 27 ~~k~~lVTGas-~GIG~aia~~la~-----~G~~V~~~ 58 (270)
T 3ftp_A 27 DKQVAIVTGAS-RGIGRAIALELAR-----RGAMVIGT 58 (270)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHH-----TTCEEEEE
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHH-----CCCEEEEE
Confidence 35899999985 8999 99999999 89998764
No 259
>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=48.41 E-value=11 Score=35.62 Aligned_cols=34 Identities=9% Similarity=0.010 Sum_probs=27.9
Q ss_pred CeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEeccCC
Q 006689 36 LQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGLDP 75 (635)
Q Consensus 36 ~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~Dp 75 (635)
.|-|+||||- ++|| .+.+.|.. +|++|..+-.++
T Consensus 2 ~k~vlVtGas-ggiG~~la~~l~~-----~G~~V~~~~r~~ 36 (242)
T 1uay_A 2 ERSALVTGGA-SGLGRAAALALKA-----RGYRVVVLDLRR 36 (242)
T ss_dssp CCEEEEETTT-SHHHHHHHHHHHH-----HTCEEEEEESSC
T ss_pred CCEEEEeCCC-ChHHHHHHHHHHH-----CCCEEEEEccCc
Confidence 4779999985 8999 99998888 899998864443
No 260
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=48.39 E-value=13 Score=36.79 Aligned_cols=34 Identities=12% Similarity=0.059 Sum_probs=28.1
Q ss_pred CCCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEecc
Q 006689 34 LNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGL 73 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~ 73 (635)
++.|.|+||||- |||| .+.+.|-. +|++|...-.
T Consensus 26 ~~~k~vlITGas-ggIG~~la~~l~~-----~G~~V~~~~r 60 (286)
T 1xu9_A 26 LQGKKVIVTGAS-KGIGREMAYHLAK-----MGAHVVVTAR 60 (286)
T ss_dssp GTTCEEEESSCS-SHHHHHHHHHHHH-----TTCEEEEEES
T ss_pred cCCCEEEEeCCC-cHHHHHHHHHHHH-----CCCEEEEEEC
Confidence 346899999985 8999 99999989 8999887543
No 261
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=48.36 E-value=13 Score=36.65 Aligned_cols=33 Identities=12% Similarity=0.219 Sum_probs=25.1
Q ss_pred CeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEeccCC
Q 006689 36 LQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGLDP 75 (635)
Q Consensus 36 ~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~Dp 75 (635)
|| |+||||- .-|| .|.+.|.+ +|++|+.+--+|
T Consensus 1 Mk-ILVTGat-GfIG~~L~~~L~~-----~G~~V~~l~R~~ 34 (298)
T 4b4o_A 1 MR-VLVGGGT-GFIGTALTQLLNA-----RGHEVTLVSRKP 34 (298)
T ss_dssp CE-EEEETTT-SHHHHHHHHHHHH-----TTCEEEEEESSC
T ss_pred CE-EEEECCC-CHHHHHHHHHHHH-----CCCEEEEEECCC
Confidence 56 9999973 2366 78888888 899999975543
No 262
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=48.26 E-value=18 Score=35.75 Aligned_cols=34 Identities=3% Similarity=-0.093 Sum_probs=28.6
Q ss_pred CeEEEEccccc-cchh-hHHHHHHhcCcCCCCceeEEeccC
Q 006689 36 LQYMFLCLNEC-ACIN-FFSLFLVQNCQYHPNTHFNLFGLD 74 (635)
Q Consensus 36 ~k~i~vtggv~-s~lg-s~g~ll~~~~~~~~g~~v~~~K~D 74 (635)
-|.++||||-- |||| ++.+.|-. +|++|...=.+
T Consensus 26 ~k~vlVTGasg~~GIG~~ia~~l~~-----~G~~V~~~~r~ 61 (280)
T 3nrc_A 26 GKKILITGLLSNKSIAYGIAKAMHR-----EGAELAFTYVG 61 (280)
T ss_dssp TCEEEECCCCSTTCHHHHHHHHHHH-----TTCEEEEEECT
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHH-----cCCEEEEeeCc
Confidence 48999999854 8999 99999999 99999886443
No 263
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=48.19 E-value=12 Score=34.95 Aligned_cols=33 Identities=6% Similarity=-0.086 Sum_probs=26.4
Q ss_pred CeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEeccCC
Q 006689 36 LQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGLDP 75 (635)
Q Consensus 36 ~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~Dp 75 (635)
|| |+||||- ++|| .+.+.|.. +|++|..+-.+|
T Consensus 1 Mk-ilVtGat-G~iG~~l~~~L~~-----~g~~V~~~~R~~ 34 (224)
T 3h2s_A 1 MK-IAVLGAT-GRAGSAIVAEARR-----RGHEVLAVVRDP 34 (224)
T ss_dssp CE-EEEETTT-SHHHHHHHHHHHH-----TTCEEEEEESCH
T ss_pred CE-EEEEcCC-CHHHHHHHHHHHH-----CCCEEEEEEecc
Confidence 46 8999974 7788 88888888 899999876543
No 264
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=48.12 E-value=8.4 Score=38.75 Aligned_cols=35 Identities=26% Similarity=0.387 Sum_probs=26.0
Q ss_pred CCCEEEECCCCCCCcchhHHHHHHHHHHc--CCCEEEEehhH
Q 006689 396 GADGILVPGGFGNRGVQGKILAAKYAREH--RIPYLGICLGM 435 (635)
Q Consensus 396 ~~DGIllPGGfG~rg~eg~i~air~are~--~iP~LGICLGm 435 (635)
++|.|++-||=|+ +..+++.+... ++|+|||=+|.
T Consensus 35 ~~D~vv~lGGDGT-----~l~aa~~~~~~~~~~PilGIn~G~ 71 (272)
T 2i2c_A 35 EPEIVISIGGDGT-----FLSAFHQYEERLDEIAFIGIHTGH 71 (272)
T ss_dssp SCSEEEEEESHHH-----HHHHHHHTGGGTTTCEEEEEESSS
T ss_pred CCCEEEEEcCcHH-----HHHHHHHHhhcCCCCCEEEEeCCC
Confidence 5799999997332 55667776654 89999998764
No 265
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=48.11 E-value=14 Score=34.18 Aligned_cols=33 Identities=0% Similarity=-0.197 Sum_probs=26.1
Q ss_pred CeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEeccCC
Q 006689 36 LQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGLDP 75 (635)
Q Consensus 36 ~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~Dp 75 (635)
|| |+||||- ++|| .+.+.|.. +|++|..+--+|
T Consensus 1 Mk-vlVtGat-G~iG~~l~~~L~~-----~g~~V~~~~R~~ 34 (221)
T 3ew7_A 1 MK-IGIIGAT-GRAGSRILEEAKN-----RGHEVTAIVRNA 34 (221)
T ss_dssp CE-EEEETTT-SHHHHHHHHHHHH-----TTCEEEEEESCS
T ss_pred Ce-EEEEcCC-chhHHHHHHHHHh-----CCCEEEEEEcCc
Confidence 35 8999974 6788 88888888 899999876553
No 266
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=48.10 E-value=15 Score=32.74 Aligned_cols=38 Identities=13% Similarity=0.057 Sum_probs=30.7
Q ss_pred cCCCEEEECCCCCCCcchhHHHHHHHHHHcCCCEEEEehhHHHH
Q 006689 395 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGICLGMQVA 438 (635)
Q Consensus 395 ~~~DGIllPGGfG~rg~eg~i~air~are~~iP~LGICLGmQll 438 (635)
.++.+|++..|+-+ -++++.|+++++.++|=|+|+++-
T Consensus 81 ~g~k~v~~~~G~~~------~e~~~~a~~~Girvv~nC~gv~l~ 118 (122)
T 3ff4_A 81 LKPKRVIFNPGTEN------EELEEILSENGIEPVIGCTLVMLS 118 (122)
T ss_dssp HCCSEEEECTTCCC------HHHHHHHHHTTCEEEESCHHHHHH
T ss_pred cCCCEEEECCCCCh------HHHHHHHHHcCCeEECCcCeEEec
Confidence 36678888888743 367888999999999999999875
No 267
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=48.07 E-value=13 Score=36.50 Aligned_cols=33 Identities=6% Similarity=-0.006 Sum_probs=27.8
Q ss_pred CCCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEec
Q 006689 34 LNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFG 72 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K 72 (635)
++.|.++|||| -+||| .+.+.|.. +|++|...-
T Consensus 4 l~~k~vlITGa-s~gIG~aia~~l~~-----~G~~V~~~~ 37 (263)
T 2a4k_A 4 LSGKTILVTGA-ASGIGRAALDLFAR-----EGASLVAVD 37 (263)
T ss_dssp TTTCEEEEEST-TSHHHHHHHHHHHH-----TTCEEEEEE
T ss_pred CCCCEEEEECC-CCHHHHHHHHHHHH-----CCCEEEEEe
Confidence 44588999998 58999 99999999 899988753
No 268
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=47.94 E-value=14 Score=36.44 Aligned_cols=33 Identities=6% Similarity=-0.026 Sum_probs=28.2
Q ss_pred CCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEecc
Q 006689 35 NLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGL 73 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~ 73 (635)
+-|.++||||- |||| .+.+.|-. +|++|...-.
T Consensus 14 ~gk~~lVTGas-~gIG~a~a~~la~-----~G~~V~~~~r 47 (280)
T 3pgx_A 14 QGRVAFITGAA-RGQGRSHAVRLAA-----EGADIIACDI 47 (280)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHH-----TTCEEEEEEC
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHH-----CCCEEEEEec
Confidence 45899999985 8999 99999999 9999987644
No 269
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=47.82 E-value=13 Score=37.24 Aligned_cols=33 Identities=6% Similarity=0.097 Sum_probs=27.8
Q ss_pred CCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEecc
Q 006689 35 NLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGL 73 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~ 73 (635)
+.|.++|||| -+||| .+.+.|-. +|++|...-.
T Consensus 25 ~~k~vlVTGa-s~gIG~aia~~L~~-----~G~~V~~~~r 58 (297)
T 1xhl_A 25 SGKSVIITGS-SNGIGRSAAVIFAK-----EGAQVTITGR 58 (297)
T ss_dssp TTCEEEETTC-SSHHHHHHHHHHHH-----TTCEEEEEES
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHH-----CCCEEEEEeC
Confidence 4588999998 58999 99999999 8999987543
No 270
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=47.81 E-value=12 Score=36.86 Aligned_cols=33 Identities=12% Similarity=-0.060 Sum_probs=27.4
Q ss_pred CCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEecc
Q 006689 35 NLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGL 73 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~ 73 (635)
+.|.++||||- ++|| .+.+.|.. +|++|..+-.
T Consensus 31 ~~k~vlVTGas-ggIG~~la~~l~~-----~G~~V~~~~r 64 (279)
T 1xg5_A 31 RDRLALVTGAS-GGIGAAVARALVQ-----QGLKVVGCAR 64 (279)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHH-----TTCEEEEEES
T ss_pred CCCEEEEECCC-chHHHHHHHHHHH-----CCCEEEEEEC
Confidence 45899999885 8999 99999999 8999887533
No 271
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=47.57 E-value=14 Score=36.50 Aligned_cols=32 Identities=16% Similarity=0.032 Sum_probs=27.0
Q ss_pred CCCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEe
Q 006689 34 LNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLF 71 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~ 71 (635)
+..|.++||||- |||| .+.+.|-. +|++|...
T Consensus 29 l~gk~~lVTGas-~GIG~aia~~la~-----~G~~V~~~ 61 (271)
T 3v2g_A 29 LAGKTAFVTGGS-RGIGAAIAKRLAL-----EGAAVALT 61 (271)
T ss_dssp CTTCEEEEETTT-SHHHHHHHHHHHH-----TTCEEEEE
T ss_pred CCCCEEEEeCCC-cHHHHHHHHHHHH-----CCCEEEEE
Confidence 346899999995 8999 99999999 89988664
No 272
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=47.49 E-value=14 Score=36.49 Aligned_cols=33 Identities=9% Similarity=0.193 Sum_probs=27.5
Q ss_pred CCCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEec
Q 006689 34 LNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFG 72 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K 72 (635)
++.|.++|||| -+||| .+.+.|-. +|++|...-
T Consensus 4 l~~k~vlVTGa-s~gIG~~ia~~l~~-----~G~~V~~~~ 37 (280)
T 1xkq_A 4 FSNKTVIITGS-SNGIGRTTAILFAQ-----EGANVTITG 37 (280)
T ss_dssp TTTCEEEETTC-SSHHHHHHHHHHHH-----TTCEEEEEE
T ss_pred CCCCEEEEECC-CChHHHHHHHHHHH-----CCCEEEEEe
Confidence 34588999998 48999 99999999 899988753
No 273
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=47.47 E-value=15 Score=35.33 Aligned_cols=35 Identities=3% Similarity=-0.077 Sum_probs=28.8
Q ss_pred CCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEeccCC
Q 006689 35 NLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGLDP 75 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~Dp 75 (635)
+.|.|+||||- +||| .+.+.|-. +|++|...-.++
T Consensus 6 ~~k~vlVTGas-~gIG~~ia~~l~~-----~G~~V~~~~r~~ 41 (241)
T 1dhr_A 6 EARRVLVYGGR-GALGSRCVQAFRA-----RNWWVASIDVVE 41 (241)
T ss_dssp CCCEEEEETTT-SHHHHHHHHHHHT-----TTCEEEEEESSC
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHh-----CCCEEEEEeCCh
Confidence 35889999974 8999 99999999 999998865443
No 274
>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}
Probab=47.28 E-value=16 Score=36.79 Aligned_cols=33 Identities=6% Similarity=-0.098 Sum_probs=28.5
Q ss_pred CCeEEEEcccc-ccchh-hHHHHHHhcCcCCCCceeEEec
Q 006689 35 NLQYMFLCLNE-CACIN-FFSLFLVQNCQYHPNTHFNLFG 72 (635)
Q Consensus 35 ~~k~i~vtggv-~s~lg-s~g~ll~~~~~~~~g~~v~~~K 72 (635)
.-|.++||||- -|||| .+.+.|-. +|++|.+.-
T Consensus 8 ~~k~~lVTGa~~s~GIG~aia~~la~-----~G~~Vv~~~ 42 (319)
T 2ptg_A 8 RGKTAFVAGVADSNGYGWAICKLLRA-----AGARVLVGT 42 (319)
T ss_dssp TTCEEEEECCCCTTSHHHHHHHHHHH-----TTCEEEEEE
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHH-----CCCEEEEEe
Confidence 35889999995 89999 99999999 999998763
No 275
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=47.15 E-value=18 Score=35.29 Aligned_cols=33 Identities=9% Similarity=0.051 Sum_probs=28.1
Q ss_pred CCeEEEEcccc-ccchh-hHHHHHHhcCcCCCCceeEEec
Q 006689 35 NLQYMFLCLNE-CACIN-FFSLFLVQNCQYHPNTHFNLFG 72 (635)
Q Consensus 35 ~~k~i~vtggv-~s~lg-s~g~ll~~~~~~~~g~~v~~~K 72 (635)
+.|-++||||- -+||| ++.+.|-. +|++|...-
T Consensus 6 ~~k~vlVTGa~~s~gIG~aia~~l~~-----~G~~V~~~~ 40 (269)
T 2h7i_A 6 DGKRILVSGIITDSSIAFHIARVAQE-----QGAQLVLTG 40 (269)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHH-----TTCEEEEEE
T ss_pred CCCEEEEECCCCCCchHHHHHHHHHH-----CCCEEEEEe
Confidence 45889999994 79999 99999999 899988753
No 276
>1ihu_A Arsenical pump-driving ATPase; aluminum fluoride, ADP, ARSA ATPase, ATP binding site, hydro; HET: ADP; 2.15A {Escherichia coli} SCOP: c.37.1.10 c.37.1.10 PDB: 1f48_A* 1ii0_A* 1ii9_A*
Probab=47.07 E-value=16 Score=40.47 Aligned_cols=37 Identities=11% Similarity=0.119 Sum_probs=25.8
Q ss_pred eEEEEccccccchh------hHHHHHHhcCcCCCCceeEEeccCCcccc
Q 006689 37 QYMFLCLNECACIN------FFSLFLVQNCQYHPNTHFNLFGLDPYLNT 79 (635)
Q Consensus 37 k~i~vtggv~s~lg------s~g~ll~~~~~~~~g~~v~~~K~DpYlN~ 79 (635)
+-|+|++| -.|.| .++..|.. +|.+|-.+-.||.-|.
T Consensus 327 ~~~~~~~~-~~g~Gktt~a~~lA~~l~~-----~g~~vllvD~Dp~~~l 369 (589)
T 1ihu_A 327 HGLIMLMG-KGGVGKTTMAAAIAVRLAD-----MGFDVHLTTSDPAAHL 369 (589)
T ss_dssp CEEEEEEC-STTSSHHHHHHHHHHHHHH-----TTCCEEEEESCCC---
T ss_pred CeEEEEec-CCCCChhhHHHHHHHHHHH-----CCCcEEEEeCCCcccH
Confidence 34444443 45677 78888888 9999999999997554
No 277
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=46.93 E-value=14 Score=36.85 Aligned_cols=31 Identities=3% Similarity=-0.061 Sum_probs=26.7
Q ss_pred CCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEe
Q 006689 35 NLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLF 71 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~ 71 (635)
+-|.++|||| -+||| .+.+.|-. +|++|...
T Consensus 48 ~~k~vlVTGa-s~GIG~aia~~la~-----~G~~V~~~ 79 (294)
T 3r3s_A 48 KDRKALVTGG-DSGIGRAAAIAYAR-----EGADVAIN 79 (294)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHH-----TTCEEEEE
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHH-----CCCEEEEE
Confidence 4589999999 49999 99999999 89998763
No 278
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=46.88 E-value=14 Score=36.42 Aligned_cols=32 Identities=6% Similarity=0.039 Sum_probs=27.3
Q ss_pred CCCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEe
Q 006689 34 LNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLF 71 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~ 71 (635)
++.|-|+||||- ++|| .+.+.|.. +|++|..+
T Consensus 24 l~~k~vlITGas-ggiG~~la~~L~~-----~G~~V~~~ 56 (302)
T 1w6u_A 24 FQGKVAFITGGG-TGLGKGMTTLLSS-----LGAQCVIA 56 (302)
T ss_dssp TTTCEEEEETTT-SHHHHHHHHHHHH-----TTCEEEEE
T ss_pred CCCCEEEEECCC-chHHHHHHHHHHH-----CCCEEEEE
Confidence 445899999985 8999 99999999 89998875
No 279
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=46.84 E-value=14 Score=36.05 Aligned_cols=33 Identities=15% Similarity=0.094 Sum_probs=27.4
Q ss_pred CCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEecc
Q 006689 35 NLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGL 73 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~ 73 (635)
+.|.++||||- +||| .+.+.|-. +|++|...-.
T Consensus 6 ~~k~vlVTGas-~gIG~~ia~~l~~-----~G~~V~~~~r 39 (267)
T 2gdz_A 6 NGKVALVTGAA-QGIGRAFAEALLL-----KGAKVALVDW 39 (267)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHH-----TTCEEEEEES
T ss_pred CCCEEEEECCC-CcHHHHHHHHHHH-----CCCEEEEEEC
Confidence 34889999984 8999 99999999 8999887533
No 280
>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*
Probab=46.74 E-value=16 Score=36.78 Aligned_cols=33 Identities=12% Similarity=-0.028 Sum_probs=28.8
Q ss_pred CCeEEEEcccc-ccchh-hHHHHHHhcCcCCCCceeEEec
Q 006689 35 NLQYMFLCLNE-CACIN-FFSLFLVQNCQYHPNTHFNLFG 72 (635)
Q Consensus 35 ~~k~i~vtggv-~s~lg-s~g~ll~~~~~~~~g~~v~~~K 72 (635)
.-|.++||||- -|||| .+.+.|-. +|++|...-
T Consensus 8 ~gk~~lVTGa~~s~GIG~aia~~la~-----~G~~Vv~~~ 42 (315)
T 2o2s_A 8 RGQTAFVAGVADSHGYGWAIAKHLAS-----AGARVALGT 42 (315)
T ss_dssp TTCEEEEECCSSSSSHHHHHHHHHHT-----TTCEEEEEE
T ss_pred CCCEEEEeCCCCCCChHHHHHHHHHH-----CCCEEEEEe
Confidence 35899999995 89999 99999999 999998863
No 281
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=46.73 E-value=14 Score=36.35 Aligned_cols=31 Identities=6% Similarity=-0.042 Sum_probs=26.8
Q ss_pred CCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEe
Q 006689 35 NLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLF 71 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~ 71 (635)
+-|-++||||- |||| .+.+.|-. +|++|...
T Consensus 26 ~gk~vlVTGas-~gIG~aia~~la~-----~G~~V~~~ 57 (266)
T 3grp_A 26 TGRKALVTGAT-GGIGEAIARCFHA-----QGAIVGLH 57 (266)
T ss_dssp TTCEEEESSTT-SHHHHHHHHHHHH-----TTCEEEEE
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHH-----CCCEEEEE
Confidence 35899999985 8999 99999999 89998775
No 282
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=46.71 E-value=15 Score=37.18 Aligned_cols=32 Identities=9% Similarity=0.004 Sum_probs=27.6
Q ss_pred CCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEec
Q 006689 35 NLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFG 72 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K 72 (635)
+-|.++||||- |||| .+.+.|-. +|++|..+-
T Consensus 45 ~gk~~lVTGas-~GIG~aia~~la~-----~G~~Vv~~~ 77 (317)
T 3oec_A 45 QGKVAFITGAA-RGQGRTHAVRLAQ-----DGADIVAID 77 (317)
T ss_dssp TTCEEEESSCS-SHHHHHHHHHHHH-----TTCEEEEEE
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHH-----CCCeEEEEe
Confidence 35899999995 9999 99999999 999998853
No 283
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=46.70 E-value=16 Score=35.63 Aligned_cols=31 Identities=3% Similarity=-0.047 Sum_probs=26.9
Q ss_pred CCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEe
Q 006689 35 NLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLF 71 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~ 71 (635)
+-|.++|||| -|||| .+.+.|-. +|++|...
T Consensus 10 ~~k~vlVTGa-s~gIG~aia~~l~~-----~G~~V~~~ 41 (264)
T 3ucx_A 10 TDKVVVISGV-GPALGTTLARRCAE-----QGADLVLA 41 (264)
T ss_dssp TTCEEEEESC-CTTHHHHHHHHHHH-----TTCEEEEE
T ss_pred CCcEEEEECC-CcHHHHHHHHHHHH-----CcCEEEEE
Confidence 4589999999 48999 99999999 99998875
No 284
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=46.69 E-value=15 Score=36.43 Aligned_cols=34 Identities=6% Similarity=0.089 Sum_probs=28.6
Q ss_pred CCCeEEEEcccc---------------ccchh-hHHHHHHhcCcCCCCceeEEec
Q 006689 34 LNLQYMFLCLNE---------------CACIN-FFSLFLVQNCQYHPNTHFNLFG 72 (635)
Q Consensus 34 ~~~k~i~vtggv---------------~s~lg-s~g~ll~~~~~~~~g~~v~~~K 72 (635)
+.-|-++||||- -+++| +|+..|-. +|++|+.+-
T Consensus 6 l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~-----~Ga~V~l~~ 55 (226)
T 1u7z_A 6 LKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAAR-----RGANVTLVS 55 (226)
T ss_dssp TTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHH-----TTCEEEEEE
T ss_pred CCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHH-----CCCEEEEEE
Confidence 446889999996 45699 99999999 999999863
No 285
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=45.51 E-value=71 Score=30.99 Aligned_cols=87 Identities=11% Similarity=0.085 Sum_probs=45.4
Q ss_pred ccEEEEEeccCCCcch-HHHHHHHHHHccccceeeeEEEEecCCCCCccccCCChhhhhHHHHhc--cCCCEEEECCCCC
Q 006689 331 PVRIAMVGKYTGLSDA-YLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGGFG 407 (635)
Q Consensus 331 ~v~IalVGkY~~l~Da-Y~SI~~AL~~ag~~~~vkl~i~wi~s~~le~~~~~~~p~~y~~a~~~L--~~~DGIllPGGfG 407 (635)
..+|+++-.. ..+. |..+.+.++.+.-+.+..+ .+.++... .++++-.+..+.+ .++|||++.+...
T Consensus 3 ~~~Igvi~~~--~~~~~~~~~~~gi~~~a~~~g~~~--~~~~~~~~------~~~~~~~~~i~~l~~~~vdgiii~~~~~ 72 (297)
T 3rot_A 3 RDKYYLITHG--SQDPYWTSLFQGAKKAAEELKVDL--QILAPPGA------NDVPKQVQFIESALATYPSGIATTIPSD 72 (297)
T ss_dssp CCEEEEECSC--CCSHHHHHHHHHHHHHHHHHTCEE--EEECCSSS------CCHHHHHHHHHHHHHTCCSEEEECCCCS
T ss_pred eEEEEEEecC--CCCchHHHHHHHHHHHHHHhCcEE--EEECCCCc------CCHHHHHHHHHHHHHcCCCEEEEeCCCH
Confidence 4689998432 2334 3445555555544444432 23443211 0122222222332 5899999976422
Q ss_pred CCcchhHHHHHHHHHHcCCCEEEE
Q 006689 408 NRGVQGKILAAKYAREHRIPYLGI 431 (635)
Q Consensus 408 ~rg~eg~i~air~are~~iP~LGI 431 (635)
.. ....++.+++.++|+.-+
T Consensus 73 -~~---~~~~~~~~~~~giPvV~~ 92 (297)
T 3rot_A 73 -TA---FSKSLQRANKLNIPVIAV 92 (297)
T ss_dssp -ST---THHHHHHHHHHTCCEEEE
T ss_pred -HH---HHHHHHHHHHCCCCEEEE
Confidence 12 234567777889998654
No 286
>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*
Probab=45.45 E-value=18 Score=35.86 Aligned_cols=34 Identities=9% Similarity=-0.102 Sum_probs=28.5
Q ss_pred CCCeEEEEcccc-ccchh-hHHHHHHhcCcCCCCceeEEec
Q 006689 34 LNLQYMFLCLNE-CACIN-FFSLFLVQNCQYHPNTHFNLFG 72 (635)
Q Consensus 34 ~~~k~i~vtggv-~s~lg-s~g~ll~~~~~~~~g~~v~~~K 72 (635)
++.|.++||||- -|||| .+.+.|-. +|++|...-
T Consensus 6 l~~k~~lVTGas~~~GIG~aia~~la~-----~G~~V~~~~ 41 (297)
T 1d7o_A 6 LRGKRAFIAGIADDNGYGWAVAKSLAA-----AGAEILVGT 41 (297)
T ss_dssp CTTCEEEEECCSSSSSHHHHHHHHHHH-----TTCEEEEEE
T ss_pred cCCCEEEEECCCCCCChHHHHHHHHHH-----CCCeEEEee
Confidence 345889999995 48999 99999999 999998763
No 287
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=45.41 E-value=15 Score=35.93 Aligned_cols=34 Identities=12% Similarity=0.047 Sum_probs=28.3
Q ss_pred CCCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEecc
Q 006689 34 LNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGL 73 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~ 73 (635)
+..|-++||||- |||| .+.+.|-. +|++|...-.
T Consensus 18 l~~k~vlVTGas-~gIG~aia~~l~~-----~G~~V~~~~r 52 (266)
T 4egf_A 18 LDGKRALITGAT-KGIGADIARAFAA-----AGARLVLSGR 52 (266)
T ss_dssp CTTCEEEETTTT-SHHHHHHHHHHHH-----TTCEEEEEES
T ss_pred CCCCEEEEeCCC-cHHHHHHHHHHHH-----CCCEEEEEeC
Confidence 345899999995 8999 99999999 9999887644
No 288
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=45.38 E-value=19 Score=35.25 Aligned_cols=34 Identities=6% Similarity=-0.135 Sum_probs=28.4
Q ss_pred CCCeEEEEccccc-cchh-hHHHHHHhcCcCCCCceeEEec
Q 006689 34 LNLQYMFLCLNEC-ACIN-FFSLFLVQNCQYHPNTHFNLFG 72 (635)
Q Consensus 34 ~~~k~i~vtggv~-s~lg-s~g~ll~~~~~~~~g~~v~~~K 72 (635)
+..|.++||||-- +||| .+.+.|-. +|++|...-
T Consensus 4 l~~k~vlVTGas~~~gIG~~~a~~l~~-----~G~~V~~~~ 39 (275)
T 2pd4_A 4 LKGKKGLIVGVANNKSIAYGIAQSCFN-----QGATLAFTY 39 (275)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHT-----TTCEEEEEE
T ss_pred CCCCEEEEECCCCCCcHHHHHHHHHHH-----CCCEEEEEe
Confidence 3458899999963 8999 99999999 899988753
No 289
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=45.35 E-value=15 Score=34.80 Aligned_cols=32 Identities=9% Similarity=-0.008 Sum_probs=26.7
Q ss_pred CeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEecc
Q 006689 36 LQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGL 73 (635)
Q Consensus 36 ~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~ 73 (635)
.|.|+||||- ++|| .+.+.|-. +|++|...-.
T Consensus 5 ~k~vlVtGas-ggiG~~~a~~l~~-----~G~~V~~~~r 37 (234)
T 2ehd_A 5 KGAVLITGAS-RGIGEATARLLHA-----KGYRVGLMAR 37 (234)
T ss_dssp CCEEEESSTT-SHHHHHHHHHHHH-----TTCEEEEEES
T ss_pred CCEEEEECCC-cHHHHHHHHHHHH-----CCCEEEEEEC
Confidence 5789999985 8999 99999988 8999887543
No 290
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=45.29 E-value=14 Score=35.85 Aligned_cols=31 Identities=13% Similarity=0.047 Sum_probs=26.3
Q ss_pred CeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEec
Q 006689 36 LQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFG 72 (635)
Q Consensus 36 ~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K 72 (635)
.|.++||||- +||| .+.+.|-. +|++|...-
T Consensus 2 ~k~vlVTGas-~gIG~~ia~~l~~-----~G~~V~~~~ 33 (256)
T 1geg_A 2 KKVALVTGAG-QGIGKAIALRLVK-----DGFAVAIAD 33 (256)
T ss_dssp CCEEEEETTT-SHHHHHHHHHHHH-----TTCEEEEEE
T ss_pred CCEEEEECCC-ChHHHHHHHHHHH-----CCCEEEEEe
Confidence 4789999985 8999 99999999 899988753
No 291
>3la6_A Tyrosine-protein kinase WZC; P-loop protein, nucleotide binding domain, walker A motif, B protein kinase, oligomerization; HET: ADP; 3.20A {Escherichia coli}
Probab=45.24 E-value=84 Score=31.57 Aligned_cols=143 Identities=12% Similarity=0.134 Sum_probs=0.0
Q ss_pred CCCCeEEEEccccccchh------hHHHHHHhcCcCCCCceeEEeccCCc---------cccCCCCCCccCcceEEEccC
Q 006689 33 PLNLQYMFLCLNECACIN------FFSLFLVQNCQYHPNTHFNLFGLDPY---------LNTDAGTMSPFEHGEVFVLDD 97 (635)
Q Consensus 33 ~~~~k~i~vtggv~s~lg------s~g~ll~~~~~~~~g~~v~~~K~DpY---------lN~d~gtmsp~eHGEvfV~~D 97 (635)
..+.|.|.||++. .|.| .|+..|.. .|.+|-.|-.||. +.-++|
T Consensus 89 ~~~~kvI~vts~k-gG~GKTtva~nLA~~lA~-----~G~rVLLID~D~~~~~l~~~~~~~~~~g--------------- 147 (286)
T 3la6_A 89 QAQNNVLMMTGVS-PSIGMTFVCANLAAVISQ-----TNKRVLLIDCDMRKGYTHELLGTNNVNG--------------- 147 (286)
T ss_dssp TTTCCEEEEEESS-SSSSHHHHHHHHHHHHHT-----TTCCEEEEECCTTTCCHHHHHTCCCTTC---------------
T ss_pred CCCCeEEEEECCC-CCCcHHHHHHHHHHHHHh-----CCCCEEEEeccCCCCCHHHHhCCCCCCC---------------
Q ss_pred CccccCCCCccccccCCCCCCCCcccchHhHHHHHhhhhcCCCCCCe----eEEcccch-----------HHHHHHHHHH
Q 006689 98 GGEVDLDLGNYERFMDIKLTRDNNITTGKIYQSVIDKERKGDYLGKT----VQVVPHIT-----------DEIQDWIERV 162 (635)
Q Consensus 98 G~E~DlDlG~YeRfl~~~l~~~~nittGkiy~~vi~kEr~g~ylG~t----vQviPHit-----------~~i~~~i~~~ 162 (635)
+..-+..+..-.+..-++ +.++|--. +.+++.|+.+
T Consensus 148 -----------------------------l~~~l~~~~~~~~~i~~~~~~~l~vl~~g~~~~~~~ell~~~~l~~ll~~l 198 (286)
T 3la6_A 148 -----------------------------LSEILIGQGDITTAAKPTSIAKFDLIPRGQVPPNPSELLMSERFAELVNWA 198 (286)
T ss_dssp -----------------------------HHHHHHTSSCTTTTCEECSSTTEEEECCCSCCSCHHHHHTSHHHHHHHHHH
T ss_pred -----------------------------HHHHccCCCCHHHheeccCCCCEEEEeCCCCCCCHHHHhchHHHHHHHHHH
Q ss_pred hcccCCCCCCCCcEEEEeeCCcccccCcchHHHHHHHhhhhcCCCCEEEEeeeeeeeecCCCccccCCccchhhhhhcCC
Q 006689 163 AMIPVDGKEGPVDVCVIELGGTIGDIESMPFIEALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQG 242 (635)
Q Consensus 163 ~~~pvd~~~~~~dv~i~EiGGTvGdies~pf~ea~rq~~~~~g~~n~~~ihv~~vp~~~~~~e~KtKptQ~svk~Lrs~G 242 (635)
.+ .+|+|||................ ++..|-++-..+....+-++.+++.|+..|
T Consensus 199 ~~--------~yD~VIIDtpp~~~~~da~~l~~-----------------~aD~vllVv~~~~~~~~~~~~~~~~l~~~g 253 (286)
T 3la6_A 199 SK--------NYDLVLIDTPPILAVTDAAIVGR-----------------HVGTTLMVARYAVNTLKEVETSLSRFEQNG 253 (286)
T ss_dssp HH--------HCSEEEEECCCTTTCTHHHHHTT-----------------TCSEEEEEEETTTSBHHHHHHHHHHHHHTT
T ss_pred Hh--------CCCEEEEcCCCCcchHHHHHHHH-----------------HCCeEEEEEeCCCCcHHHHHHHHHHHHhCC
Q ss_pred CcccEEEE
Q 006689 243 LTPNILAC 250 (635)
Q Consensus 243 i~pd~iv~ 250 (635)
+..-++|+
T Consensus 254 ~~~~GvVl 261 (286)
T 3la6_A 254 IPVKGVIL 261 (286)
T ss_dssp CCCCEEEE
T ss_pred CCEEEEEE
No 292
>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*
Probab=45.23 E-value=15 Score=37.45 Aligned_cols=32 Identities=3% Similarity=0.060 Sum_probs=27.3
Q ss_pred CCCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEe
Q 006689 34 LNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLF 71 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~ 71 (635)
+..|.++||||- |||| .+.+.|-. +|++|.+.
T Consensus 7 l~gk~~lVTGas-~GIG~~~a~~La~-----~Ga~Vv~~ 39 (319)
T 1gz6_A 7 FDGRVVLVTGAG-GGLGRAYALAFAE-----RGALVVVN 39 (319)
T ss_dssp CTTCEEEETTTT-SHHHHHHHHHHHH-----TTCEEEEE
T ss_pred CCCCEEEEeCCC-cHHHHHHHHHHHH-----CCCEEEEE
Confidence 345899999986 9999 99999999 99998874
No 293
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=44.93 E-value=18 Score=35.08 Aligned_cols=34 Identities=3% Similarity=-0.091 Sum_probs=28.8
Q ss_pred CCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEecc
Q 006689 35 NLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGL 73 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~ 73 (635)
+.|.++||||-=|||| ++.+.|-. +|++|..+-.
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~-----~G~~V~~~~r 55 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALL-----EGADVVISDY 55 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHH-----TTCEEEEEES
T ss_pred CCCEEEEECCCCCchHHHHHHHHHH-----CCCEEEEecC
Confidence 4689999999767999 99999999 8999887643
No 294
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=44.84 E-value=15 Score=34.92 Aligned_cols=28 Identities=11% Similarity=0.025 Sum_probs=24.4
Q ss_pred eEEEEccccccchh-hHHHHHHhcCcCCCCceeEE
Q 006689 37 QYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNL 70 (635)
Q Consensus 37 k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~ 70 (635)
|.|+||||- ++|| .+.+.|-. +|++|..
T Consensus 2 k~vlVTGas-ggiG~~la~~l~~-----~G~~v~~ 30 (244)
T 1edo_A 2 PVVVVTGAS-RGIGKAIALSLGK-----AGCKVLV 30 (244)
T ss_dssp CEEEETTCS-SHHHHHHHHHHHH-----TTCEEEE
T ss_pred CEEEEeCCC-chHHHHHHHHHHH-----CCCEEEE
Confidence 679999985 8999 99999999 8998876
No 295
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=44.72 E-value=16 Score=36.43 Aligned_cols=33 Identities=15% Similarity=0.185 Sum_probs=28.8
Q ss_pred CeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEeccC
Q 006689 36 LQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGLD 74 (635)
Q Consensus 36 ~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~D 74 (635)
=|-++||||- |||| ++.+.|-. .|.+|...-+|
T Consensus 11 GK~alVTGas-~GIG~aia~~la~-----~Ga~Vv~~~~~ 44 (242)
T 4b79_A 11 GQQVLVTGGS-SGIGAAIAMQFAE-----LGAEVVALGLD 44 (242)
T ss_dssp TCEEEEETTT-SHHHHHHHHHHHH-----TTCEEEEEESS
T ss_pred CCEEEEeCCC-CHHHHHHHHHHHH-----CCCEEEEEeCC
Confidence 5899999995 8999 99999999 99999886543
No 296
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=44.69 E-value=83 Score=30.13 Aligned_cols=86 Identities=9% Similarity=0.024 Sum_probs=43.0
Q ss_pred CccEEEEEeccCCCcchH-HHHHHHHHHccccceeeeEEEEecCCCCCccccCCChhhhhHHHHhc--cCCCEEEECCCC
Q 006689 330 EPVRIAMVGKYTGLSDAY-LSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGGF 406 (635)
Q Consensus 330 ~~v~IalVGkY~~l~DaY-~SI~~AL~~ag~~~~vkl~i~wi~s~~le~~~~~~~p~~y~~a~~~L--~~~DGIllPGGf 406 (635)
++.+|+++-. ...+.| ..+.+.++.+..+.+..+.+. ++.. +++.-.+..+.+ .++||||+.+..
T Consensus 7 ~~~~Ig~i~~--~~~~~~~~~~~~gi~~~a~~~g~~~~~~--~~~~--------~~~~~~~~~~~l~~~~vdgiI~~~~~ 74 (293)
T 3l6u_A 7 KRNIVGFTIV--NDKHEFAQRLINAFKAEAKANKYEALVA--TSQN--------SRISEREQILEFVHLKVDAIFITTLD 74 (293)
T ss_dssp --CEEEEEES--CSCSHHHHHHHHHHHHHHHHTTCEEEEE--ECSS--------CHHHHHHHHHHHHHTTCSEEEEECSC
T ss_pred CCcEEEEEEe--cCCcHHHHHHHHHHHHHHHHcCCEEEEE--CCCC--------CHHHHHHHHHHHHHcCCCEEEEecCC
Confidence 4468998843 233343 445555554444444333332 2221 111111122222 589999997642
Q ss_pred CCCcchhHHHHHHHHHHcCCCEEEE
Q 006689 407 GNRGVQGKILAAKYAREHRIPYLGI 431 (635)
Q Consensus 407 G~rg~eg~i~air~are~~iP~LGI 431 (635)
.+ . ....++.+.+.++|+.-+
T Consensus 75 ~~-~---~~~~~~~~~~~~iPvV~~ 95 (293)
T 3l6u_A 75 DV-Y---IGSAIEEAKKAGIPVFAI 95 (293)
T ss_dssp TT-T---THHHHHHHHHTTCCEEEE
T ss_pred hH-H---HHHHHHHHHHcCCCEEEe
Confidence 21 1 234567777889998765
No 297
>3gv0_A Transcriptional regulator, LACI family; transcription regulator, PSI-II, structural genomics structure initiative; 2.35A {Agrobacterium tumefaciens str}
Probab=44.66 E-value=91 Score=30.06 Aligned_cols=86 Identities=16% Similarity=0.206 Sum_probs=43.7
Q ss_pred CccEEEEEeccCCC-cchHHHHHHHHHHccccceeeeEEEEecCCCCCccccCCChhhhhHHHHhc--cCCCEEEECCCC
Q 006689 330 EPVRIAMVGKYTGL-SDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGGF 406 (635)
Q Consensus 330 ~~v~IalVGkY~~l-~DaY~SI~~AL~~ag~~~~vkl~i~wi~s~~le~~~~~~~p~~y~~a~~~L--~~~DGIllPGGf 406 (635)
+..+||++=..... ..-|..+++.++.+..+.+..+.+. .+..-.+ .-.+..+.+ .++||||+.+..
T Consensus 7 ~s~~Igvv~~~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~--~~~~~~~--------~~~~~~~~l~~~~vdgiIi~~~~ 76 (288)
T 3gv0_A 7 KTNVIALVLSVDEELMGFTSQMVFGITEVLSTTQYHLVVT--PHIHAKD--------SMVPIRYILETGSADGVIISKIE 76 (288)
T ss_dssp CCCEEEEECBCCCCSSCHHHHHHHHHHHHHTTSSCEEEEC--CBSSGGG--------TTHHHHHHHHHTCCSEEEEESCC
T ss_pred CCCEEEEEecCCccccHHHHHHHHHHHHHHHHcCCEEEEe--cCCcchh--------HHHHHHHHHHcCCccEEEEecCC
Confidence 44678888432111 1235566666666655555443332 2221100 011122223 589999998632
Q ss_pred CCCcchhHHHHHHHHHHcCCCEEEE
Q 006689 407 GNRGVQGKILAAKYAREHRIPYLGI 431 (635)
Q Consensus 407 G~rg~eg~i~air~are~~iP~LGI 431 (635)
... ..++.+.+.++|+.-+
T Consensus 77 ~~~------~~~~~l~~~~iPvV~i 95 (288)
T 3gv0_A 77 PND------PRVRFMTERNMPFVTH 95 (288)
T ss_dssp TTC------HHHHHHHHTTCCEEEE
T ss_pred CCc------HHHHHHhhCCCCEEEE
Confidence 221 3456667788998654
No 298
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=44.64 E-value=14 Score=36.98 Aligned_cols=35 Identities=9% Similarity=-0.009 Sum_probs=28.7
Q ss_pred CCCCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEecc
Q 006689 33 PLNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGL 73 (635)
Q Consensus 33 ~~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~ 73 (635)
+++-|.++|||| -|||| ++.+.|-. .|.+|...-.
T Consensus 4 sL~gKvalVTGa-s~GIG~aiA~~la~-----~Ga~Vv~~~~ 39 (254)
T 4fn4_A 4 SLKNKVVIVTGA-GSGIGRAIAKKFAL-----NDSIVVAVEL 39 (254)
T ss_dssp GGTTCEEEEETT-TSHHHHHHHHHHHH-----TTCEEEEEES
T ss_pred CCCCCEEEEeCC-CCHHHHHHHHHHHH-----cCCEEEEEEC
Confidence 345688999997 58999 99999999 9999987544
No 299
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=44.04 E-value=16 Score=35.41 Aligned_cols=34 Identities=3% Similarity=-0.152 Sum_probs=28.2
Q ss_pred CCCCeEEEEccccc-cchh-hHHHHHHhcCcCCCCceeEEe
Q 006689 33 PLNLQYMFLCLNEC-ACIN-FFSLFLVQNCQYHPNTHFNLF 71 (635)
Q Consensus 33 ~~~~k~i~vtggv~-s~lg-s~g~ll~~~~~~~~g~~v~~~ 71 (635)
.++-|.++||||-= +||| .+.+.|-. +|++|..+
T Consensus 17 ~l~~k~vlITGas~~~giG~~~a~~l~~-----~G~~v~~~ 52 (267)
T 3gdg_A 17 SLKGKVVVVTGASGPKGMGIEAARGCAE-----MGAAVAIT 52 (267)
T ss_dssp CCTTCEEEETTCCSSSSHHHHHHHHHHH-----TSCEEEEC
T ss_pred CcCCCEEEEECCCCCCChHHHHHHHHHH-----CCCeEEEE
Confidence 34568999999954 7999 89999999 89988774
No 300
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=44.03 E-value=92 Score=30.10 Aligned_cols=86 Identities=14% Similarity=-0.007 Sum_probs=44.2
Q ss_pred ccEEEEEeccCCCcch-HHHHHHHHHHccccceeeeEEEEecCCCCCccccCCChhhhhHHHHhc--cCCCEEEECCCCC
Q 006689 331 PVRIAMVGKYTGLSDA-YLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGGFG 407 (635)
Q Consensus 331 ~v~IalVGkY~~l~Da-Y~SI~~AL~~ag~~~~vkl~i~wi~s~~le~~~~~~~p~~y~~a~~~L--~~~DGIllPGGfG 407 (635)
..+|+++-.. ..+. |..+++.++.+..+.+..+.+.. ++.. +++...+..+.+ .++||||+.+...
T Consensus 4 ~~~I~~i~~~--~~~~~~~~~~~gi~~~a~~~g~~~~~~~-~~~~--------~~~~~~~~i~~l~~~~vdgiIi~~~~~ 72 (305)
T 3g1w_A 4 NETYMMITFQ--SGMDYWKRCLKGFEDAAQALNVTVEYRG-AAQY--------DIQEQITVLEQAIAKNPAGIAISAIDP 72 (305)
T ss_dssp -CEEEEEESS--TTSTHHHHHHHHHHHHHHHHTCEEEEEE-CSSS--------CHHHHHHHHHHHHHHCCSEEEECCSST
T ss_pred CceEEEEEcc--CCChHHHHHHHHHHHHHHHcCCEEEEeC-CCcC--------CHHHHHHHHHHHHHhCCCEEEEcCCCH
Confidence 4578888533 3334 44566665555544444433211 2211 121222222322 5899999987432
Q ss_pred CCcchhHHHHHHHHHHcCCCEEEE
Q 006689 408 NRGVQGKILAAKYAREHRIPYLGI 431 (635)
Q Consensus 408 ~rg~eg~i~air~are~~iP~LGI 431 (635)
. . ....++.+.+.++|+.-+
T Consensus 73 ~-~---~~~~~~~~~~~~iPvV~~ 92 (305)
T 3g1w_A 73 V-E---LTDTINKAVDAGIPIVLF 92 (305)
T ss_dssp T-T---THHHHHHHHHTTCCEEEE
T ss_pred H-H---HHHHHHHHHHCCCcEEEE
Confidence 1 1 234567777889998654
No 301
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=43.75 E-value=14 Score=36.99 Aligned_cols=31 Identities=6% Similarity=-0.048 Sum_probs=27.3
Q ss_pred CCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEe
Q 006689 35 NLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLF 71 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~ 71 (635)
+-|.++||||- |||| ++.+.|-. .|.+|.+.
T Consensus 8 ~gKvalVTGas-~GIG~aia~~la~-----~Ga~Vvi~ 39 (255)
T 4g81_D 8 TGKTALVTGSA-RGLGFAYAEGLAA-----AGARVILN 39 (255)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHH-----TTCEEEEC
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHH-----CCCEEEEE
Confidence 45899999986 9999 99999999 99999874
No 302
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=43.75 E-value=18 Score=36.06 Aligned_cols=34 Identities=6% Similarity=0.055 Sum_probs=28.1
Q ss_pred CeEEEEccccc--------------cc-hh-hHHHHHHhcCcCCCCceeEEeccC
Q 006689 36 LQYMFLCLNEC--------------AC-IN-FFSLFLVQNCQYHPNTHFNLFGLD 74 (635)
Q Consensus 36 ~k~i~vtggv~--------------s~-lg-s~g~ll~~~~~~~~g~~v~~~K~D 74 (635)
-|-|+||||=- || +| +|+.-|-. +|++|+.+--.
T Consensus 3 gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~-----~Ga~V~lv~~~ 52 (232)
T 2gk4_A 3 AMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLS-----AGYEVCLITTK 52 (232)
T ss_dssp CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHH-----TTCEEEEEECT
T ss_pred CCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHH-----CCCEEEEEeCC
Confidence 36799999953 66 88 99999999 99999997543
No 303
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=43.68 E-value=12 Score=36.25 Aligned_cols=31 Identities=10% Similarity=-0.076 Sum_probs=26.1
Q ss_pred CeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEec
Q 006689 36 LQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFG 72 (635)
Q Consensus 36 ~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K 72 (635)
.|.++||||- +||| .+.+.|-. +|++|...-
T Consensus 2 ~k~vlVTGas-~gIG~~ia~~l~~-----~G~~V~~~~ 33 (258)
T 3a28_C 2 SKVAMVTGGA-QGIGRGISEKLAA-----DGFDIAVAD 33 (258)
T ss_dssp CCEEEEETTT-SHHHHHHHHHHHH-----HTCEEEEEE
T ss_pred CCEEEEeCCC-cHHHHHHHHHHHH-----CCCEEEEEe
Confidence 4789999985 8999 99998888 899987753
No 304
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=43.51 E-value=15 Score=36.36 Aligned_cols=33 Identities=9% Similarity=0.029 Sum_probs=27.5
Q ss_pred CCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEecc
Q 006689 35 NLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGL 73 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~ 73 (635)
..|.++||||- +||| ++.+.|-. +|++|...-.
T Consensus 27 ~~k~~lVTGas-~GIG~aia~~la~-----~G~~V~~~~r 60 (272)
T 4dyv_A 27 GKKIAIVTGAG-SGVGRAVAVALAG-----AGYGVALAGR 60 (272)
T ss_dssp -CCEEEETTTT-SHHHHHHHHHHHH-----TTCEEEEEES
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHH-----CCCEEEEEEC
Confidence 46899999985 8999 99999999 9999987643
No 305
>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0
Probab=43.20 E-value=30 Score=30.98 Aligned_cols=75 Identities=9% Similarity=0.120 Sum_probs=40.9
Q ss_pred hHhHHHHHhhhhcCCCCCCeeEEc-----ccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCCccccc----CcchHHH
Q 006689 125 GKIYQSVIDKERKGDYLGKTVQVV-----PHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDI----ESMPFIE 195 (635)
Q Consensus 125 Gkiy~~vi~kEr~g~ylG~tvQvi-----PHit~~i~~~i~~~~~~pvd~~~~~~dv~i~EiGGTvGdi----es~pf~e 195 (635)
++-|...+.+.=... |..++|+ =.-|....+++.+... ..+||+|+|++|+ .|+ ...-|.+
T Consensus 21 ~~~~~~~l~~~l~~~--~~~~~v~n~g~~G~~~~~~~~~~~~~~~------~~~pd~vvi~~G~--ND~~~~~~~~~~~~ 90 (185)
T 3hp4_A 21 EEGWVKLLQDKYDAE--QSDIVLINASISGETSGGALRRLDALLE------QYEPTHVLIELGA--NDGLRGFPVKKMQT 90 (185)
T ss_dssp GGSHHHHHHHHHHHT--TCCEEEEECCCTTCCHHHHHHHHHHHHH------HHCCSEEEEECCH--HHHHTTCCHHHHHH
T ss_pred cccHHHHHHHHHHhc--CCcEEEEECCcCCccHHHHHHHHHHHHh------hcCCCEEEEEeec--ccCCCCcCHHHHHH
Confidence 356666666543222 4556665 1224445555555431 2378999999995 453 2234566
Q ss_pred HHHHhhhhcCCCCE
Q 006689 196 ALGQFSYRVGPGNF 209 (635)
Q Consensus 196 a~rq~~~~~g~~n~ 209 (635)
.++++-.++...+.
T Consensus 91 ~~~~~i~~~~~~~~ 104 (185)
T 3hp4_A 91 NLTALVKKSQAANA 104 (185)
T ss_dssp HHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHcCC
Confidence 66665555544443
No 306
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=42.65 E-value=1e+02 Score=29.69 Aligned_cols=84 Identities=17% Similarity=0.088 Sum_probs=45.8
Q ss_pred ccEEEEEeccCCCcchH-HHHHHHHHHccccceeeeEEEEecCCCCCccccCCChhhhhHHHHhc--cCCCEEEECCCCC
Q 006689 331 PVRIAMVGKYTGLSDAY-LSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGGFG 407 (635)
Q Consensus 331 ~v~IalVGkY~~l~DaY-~SI~~AL~~ag~~~~vkl~i~wi~s~~le~~~~~~~p~~y~~a~~~L--~~~DGIllPGGfG 407 (635)
+.+||++-. ...+.| ..+.+.++.+..+.+..+ .+.++.+. +...+..+.+ .++|||++.+.-
T Consensus 2 ~~~Ig~i~~--~~~~~~~~~~~~gi~~~a~~~g~~~--~~~~~~~~---------~~~~~~i~~l~~~~vdgiii~~~~- 67 (306)
T 8abp_A 2 NLKLGFLVK--QPEEPWFQTEWKFADKAGKDLGFEV--IKIAVPDG---------EKTLNAIDSLAASGAKGFVICTPD- 67 (306)
T ss_dssp CEEEEEEES--CTTSHHHHHHHHHHHHHHHHHTEEE--EEEECCSH---------HHHHHHHHHHHHTTCCEEEEECSC-
T ss_pred CeEEEEEeC--CCCchHHHHHHHHHHHHHHHcCCEE--EEeCCCCH---------HHHHHHHHHHHHcCCCEEEEeCCC-
Confidence 468999843 344444 445566555554444432 34444321 1111222222 579999998731
Q ss_pred CCcchhHHHHHHHHHHcCCCEEEE
Q 006689 408 NRGVQGKILAAKYAREHRIPYLGI 431 (635)
Q Consensus 408 ~rg~eg~i~air~are~~iP~LGI 431 (635)
.......++.+.+.++|+.-+
T Consensus 68 ---~~~~~~~~~~~~~~~iPvV~~ 88 (306)
T 8abp_A 68 ---PKLGSAIVAKARGYDMKVIAV 88 (306)
T ss_dssp ---GGGHHHHHHHHHHTTCEEEEE
T ss_pred ---chhhHHHHHHHHHCCCcEEEe
Confidence 123345577788889998644
No 307
>2g0t_A Conserved hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.67A {Thermotoga maritima} SCOP: c.37.1.10
Probab=42.61 E-value=21 Score=37.62 Aligned_cols=36 Identities=3% Similarity=0.064 Sum_probs=29.9
Q ss_pred CCeEEEEccccccchh------hHHHHHHhcCcCCCCceeEEeccCCc
Q 006689 35 NLQYMFLCLNECACIN------FFSLFLVQNCQYHPNTHFNLFGLDPY 76 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg------s~g~ll~~~~~~~~g~~v~~~K~DpY 76 (635)
.+|-|||||==. ++| .|-+.|+. +|++|..++.-.+
T Consensus 168 ~~~ri~v~GTDt-~vGKt~t~~~L~~~l~~-----~G~~v~~v~tgqt 209 (350)
T 2g0t_A 168 KIKVVGVFGTDC-VVGKRTTAVQLWERALE-----KGIKAGFLATGQT 209 (350)
T ss_dssp CSEEEEEEESSS-SSSHHHHHHHHHHHHHH-----TTCCEEEEECSHH
T ss_pred cceEEEEecCCC-CccCccHHHHHHHHHHh-----cCCeEEEEccCce
Confidence 478999999777 489 67788999 9999999887665
No 308
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=42.45 E-value=17 Score=34.07 Aligned_cols=31 Identities=6% Similarity=-0.024 Sum_probs=25.9
Q ss_pred EEEccccccchh-hHHHHHHhcCcCCCCceeEEeccCC
Q 006689 39 MFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGLDP 75 (635)
Q Consensus 39 i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~Dp 75 (635)
|+||||- ++|| .+.+.|.. +|++|..+-.+|
T Consensus 3 ilItGat-G~iG~~l~~~L~~-----~g~~V~~~~R~~ 34 (219)
T 3dqp_A 3 IFIVGST-GRVGKSLLKSLST-----TDYQIYAGARKV 34 (219)
T ss_dssp EEEESTT-SHHHHHHHHHHTT-----SSCEEEEEESSG
T ss_pred EEEECCC-CHHHHHHHHHHHH-----CCCEEEEEECCc
Confidence 8999975 7888 88888888 899999886654
No 309
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=42.13 E-value=15 Score=35.73 Aligned_cols=33 Identities=12% Similarity=-0.001 Sum_probs=27.5
Q ss_pred CCCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEec
Q 006689 34 LNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFG 72 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K 72 (635)
++-|.++||||- |||| .+.+.|-. +|++|...-
T Consensus 10 l~~k~vlVTGas-~gIG~~ia~~l~~-----~G~~V~~~~ 43 (256)
T 3gaf_A 10 LNDAVAIVTGAA-AGIGRAIAGTFAK-----AGASVVVTD 43 (256)
T ss_dssp CTTCEEEECSCS-SHHHHHHHHHHHH-----HTCEEEEEE
T ss_pred CCCCEEEEECCC-CHHHHHHHHHHHH-----CCCEEEEEe
Confidence 346899999985 8999 99999988 899987753
No 310
>1g3q_A MIND ATPase, cell division inhibitor; alpha-beta-alpha layered, protein-ADP complex, cell cycle, hydrolase; HET: ADP; 2.00A {Pyrococcus furiosus} SCOP: c.37.1.10 PDB: 1g3r_A* 1ion_A*
Probab=42.08 E-value=21 Score=33.75 Aligned_cols=35 Identities=9% Similarity=-0.121 Sum_probs=29.6
Q ss_pred CeEEEEccccccchh------hHHHHHHhcCcCCCCceeEEeccCCc
Q 006689 36 LQYMFLCLNECACIN------FFSLFLVQNCQYHPNTHFNLFGLDPY 76 (635)
Q Consensus 36 ~k~i~vtggv~s~lg------s~g~ll~~~~~~~~g~~v~~~K~DpY 76 (635)
+|.|.|+++ -.|.| .|+..|.. +|++|-.+..||.
T Consensus 2 ~~~i~v~s~-kgGvGKTt~a~~LA~~la~-----~g~~VlliD~D~~ 42 (237)
T 1g3q_A 2 GRIISIVSG-KGGTGKTTVTANLSVALGD-----RGRKVLAVDGDLT 42 (237)
T ss_dssp CEEEEEECS-STTSSHHHHHHHHHHHHHH-----TTCCEEEEECCTT
T ss_pred ceEEEEecC-CCCCCHHHHHHHHHHHHHh-----cCCeEEEEeCCCC
Confidence 688888875 46777 88889988 9999999999994
No 311
>2fep_A Catabolite control protein A; CCPA, transcriptional regulator; HET: SEP; 2.45A {Bacillus subtilis} PDB: 2nzu_G* 1sxh_A 1sxi_A 1sxg_A* 2nzv_G* 2oen_G*
Probab=42.05 E-value=1.2e+02 Score=29.18 Aligned_cols=32 Identities=22% Similarity=0.255 Sum_probs=21.0
Q ss_pred cCCCEEEECCCCCCCcchhHHHHHHHHHHcCCCEEEEe
Q 006689 395 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGIC 432 (635)
Q Consensus 395 ~~~DGIllPGGfG~rg~eg~i~air~are~~iP~LGIC 432 (635)
.++||||+.+...+ . ..++.+.+.++|+.-+.
T Consensus 71 ~~vdgiIi~~~~~~---~---~~~~~l~~~~iPvV~~~ 102 (289)
T 2fep_A 71 KQVDGIVFMGGNIT---D---EHVAEFKRSPVPIVLAA 102 (289)
T ss_dssp TTCSEEEECCSCCC---H---HHHHHHHHSSSCEEEES
T ss_pred CCCCEEEEecCCCC---H---HHHHHHHhcCCCEEEEc
Confidence 58999999874221 1 24555667789987653
No 312
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=41.86 E-value=16 Score=35.76 Aligned_cols=34 Identities=6% Similarity=0.003 Sum_probs=26.7
Q ss_pred CCCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEeccC
Q 006689 34 LNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGLD 74 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~D 74 (635)
|++|-|+||| - ..|| .|...|.. +|++|..+--+
T Consensus 1 M~~~~ilVtG-a-G~iG~~l~~~L~~-----~g~~V~~~~r~ 35 (286)
T 3gpi_A 1 MSLSKILIAG-C-GDLGLELARRLTA-----QGHEVTGLRRS 35 (286)
T ss_dssp -CCCCEEEEC-C-SHHHHHHHHHHHH-----TTCCEEEEECT
T ss_pred CCCCcEEEEC-C-CHHHHHHHHHHHH-----CCCEEEEEeCC
Confidence 4455699998 4 8899 88888888 89999988554
No 313
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=41.66 E-value=24 Score=34.26 Aligned_cols=33 Identities=3% Similarity=-0.105 Sum_probs=27.5
Q ss_pred CeEEEEccccc-cchh-hHHHHHHhcCcCCCCceeEEecc
Q 006689 36 LQYMFLCLNEC-ACIN-FFSLFLVQNCQYHPNTHFNLFGL 73 (635)
Q Consensus 36 ~k~i~vtggv~-s~lg-s~g~ll~~~~~~~~g~~v~~~K~ 73 (635)
.|-++||||-- +||| .+.+.|-. +|++|...-.
T Consensus 9 ~k~vlVTGas~~~gIG~~ia~~l~~-----~G~~V~~~~r 43 (265)
T 1qsg_A 9 GKRILVTGVASKLSIAYGIAQAMHR-----EGAELAFTYQ 43 (265)
T ss_dssp TCEEEECCCCSTTSHHHHHHHHHHH-----TTCEEEEEES
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHH-----CCCEEEEEcC
Confidence 47899999964 7999 99999999 8999887533
No 314
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=41.58 E-value=23 Score=34.32 Aligned_cols=33 Identities=9% Similarity=-0.044 Sum_probs=27.5
Q ss_pred CCCeEEEEccccc-cchh-hHHHHHHhcCcCCCCceeEEe
Q 006689 34 LNLQYMFLCLNEC-ACIN-FFSLFLVQNCQYHPNTHFNLF 71 (635)
Q Consensus 34 ~~~k~i~vtggv~-s~lg-s~g~ll~~~~~~~~g~~v~~~ 71 (635)
++.|.++||||-= |||| .+.+.|-. +|++|...
T Consensus 5 l~~k~vlVTGasg~~GIG~~ia~~l~~-----~G~~V~~~ 39 (266)
T 3oig_A 5 LEGRNIVVMGVANKRSIAWGIARSLHE-----AGARLIFT 39 (266)
T ss_dssp CTTCEEEEECCCSTTSHHHHHHHHHHH-----TTCEEEEE
T ss_pred cCCCEEEEEcCCCCCcHHHHHHHHHHH-----CCCEEEEe
Confidence 3468999999864 7899 99999999 89988764
No 315
>3uug_A Multiple sugar-binding periplasmic receptor CHVE; periplasmic binding protein, sugar-binding protein, sugar binding protein; HET: BDP; 1.75A {Agrobacterium tumefaciens} PDB: 3urm_A*
Probab=41.29 E-value=1.1e+02 Score=29.82 Aligned_cols=85 Identities=14% Similarity=0.079 Sum_probs=43.7
Q ss_pred ccEEEEEeccCCCcch-HHHHHHHHHHccccceeeeEEEEecCCCCCccccCCChhhhhHHHHhc--cCCCEEEECCCCC
Q 006689 331 PVRIAMVGKYTGLSDA-YLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGGFG 407 (635)
Q Consensus 331 ~v~IalVGkY~~l~Da-Y~SI~~AL~~ag~~~~vkl~i~wi~s~~le~~~~~~~p~~y~~a~~~L--~~~DGIllPGGfG 407 (635)
+.+||++-. ...+. |..+.+.++.+..+.+..+.+.. +.. +++.-.+..+.+ .++|||++.+-..
T Consensus 3 ~~~Igvi~~--~~~~~~~~~~~~gi~~~a~~~g~~~~~~~--~~~--------~~~~~~~~i~~~~~~~vdgiIi~~~~~ 70 (330)
T 3uug_A 3 KGSVGIAMP--TKSSARWIDDGNNIVKQLQEAGYKTDLQY--ADD--------DIPNQLSQIENMVTKGVKVLVIASIDG 70 (330)
T ss_dssp CCEEEEEEC--CSSSTHHHHHHHHHHHHHHHTTCEEEEEE--CTT--------CHHHHHHHHHHHHHHTCSEEEECCSSG
T ss_pred CcEEEEEeC--CCcchHHHHHHHHHHHHHHHcCCEEEEee--CCC--------CHHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence 457888843 23334 44455555555444444333333 221 111111122222 4899999987321
Q ss_pred CCcchhHHHHHHHHHHcCCCEEEE
Q 006689 408 NRGVQGKILAAKYAREHRIPYLGI 431 (635)
Q Consensus 408 ~rg~eg~i~air~are~~iP~LGI 431 (635)
......++.+.+.++|+.-+
T Consensus 71 ----~~~~~~~~~~~~~giPvV~~ 90 (330)
T 3uug_A 71 ----TTLSDVLKQAGEQGIKVIAY 90 (330)
T ss_dssp ----GGGHHHHHHHHHTTCEEEEE
T ss_pred ----hhHHHHHHHHHHCCCCEEEE
Confidence 22345677778889998654
No 316
>4hf7_A Putative acylhydrolase; PF13472 family, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: OSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=41.27 E-value=27 Score=32.62 Aligned_cols=61 Identities=11% Similarity=0.117 Sum_probs=32.4
Q ss_pred hHHHHHHHHHHhcccCCCCCCCCcEEEEeeCCcccccCc-------chHHHHHHHhhhhcCCCCEEEEeeeeeeee
Q 006689 152 TDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIES-------MPFIEALGQFSYRVGPGNFCLIHVSLVPVL 220 (635)
Q Consensus 152 t~~i~~~i~~~~~~pvd~~~~~~dv~i~EiGGTvGdies-------~pf~ea~rq~~~~~g~~n~~~ihv~~vp~~ 220 (635)
|..+..|+.+... ..+||+|+|.+|. .|+-. .-+.+-++++....-..++-.|-+|..|.-
T Consensus 63 t~~~l~r~~~~v~------~~~Pd~vvi~~G~--ND~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~iil~~~~P~~ 130 (209)
T 4hf7_A 63 SYQFLLRFREDVI------NLSPALVVINAGT--NDVAENTGAYNEDYTFGNIASMAELAKANKIKVILTSVLPAA 130 (209)
T ss_dssp HHHHHHHHHHHTG------GGCCSEEEECCCH--HHHTTSSSSCCHHHHHHHHHHHHHHHHHTTCEEEEECCCCCS
T ss_pred HHHHHHHHHHHHH------hcCCCEEEEEeCC--CcCccccccccHHHHHHHHHHhhHHHhccCceEEEEeeeccC
Confidence 4455566665321 3579999999985 45311 123344555433332234555555666654
No 317
>3tb6_A Arabinose metabolism transcriptional repressor; transcription regulation, arabinose binding, DNA binding Pro; HET: ARB; 2.21A {Bacillus subtilis}
Probab=41.03 E-value=1.3e+02 Score=28.72 Aligned_cols=37 Identities=19% Similarity=0.139 Sum_probs=23.9
Q ss_pred cCCCEEEECCCCCCCcchhHHHHHHHHHHcCCCEEEEe
Q 006689 395 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGIC 432 (635)
Q Consensus 395 ~~~DGIllPGGfG~rg~eg~i~air~are~~iP~LGIC 432 (635)
.++||||+.+..... .......++.+.+.++|+.-+.
T Consensus 70 ~~vdgiIi~~~~~~~-~~~~~~~~~~~~~~~iPvV~~~ 106 (298)
T 3tb6_A 70 QHIDGLIVEPTKSAL-QTPNIGYYLNLEKNGIPFAMIN 106 (298)
T ss_dssp TCCSEEEECCSSTTS-CCTTHHHHHHHHHTTCCEEEES
T ss_pred CCCCEEEEecccccc-cCCcHHHHHHHHhcCCCEEEEe
Confidence 589999998743221 1112355677778899987653
No 318
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=40.42 E-value=22 Score=36.77 Aligned_cols=33 Identities=9% Similarity=-0.005 Sum_probs=28.2
Q ss_pred CCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEecc
Q 006689 35 NLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGL 73 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~ 73 (635)
+-|.++||||- +||| .+.+.|-. +|++|.+.=.
T Consensus 44 ~gk~vlVTGas-~GIG~aia~~La~-----~Ga~Vvl~~r 77 (346)
T 3kvo_A 44 AGCTVFITGAS-RGIGKAIALKAAK-----DGANIVIAAK 77 (346)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHT-----TTCEEEEEES
T ss_pred CCCEEEEeCCC-hHHHHHHHHHHHH-----CCCEEEEEEC
Confidence 45899999996 9999 99999999 8999887643
No 319
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=40.37 E-value=15 Score=36.14 Aligned_cols=29 Identities=7% Similarity=-0.067 Sum_probs=25.2
Q ss_pred CeEEEEccccccchh-hHHHHHHhcCcCCCCceeEE
Q 006689 36 LQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNL 70 (635)
Q Consensus 36 ~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~ 70 (635)
.|.++||||- |||| ++.+.|-. +|++|.+
T Consensus 27 ~k~~lVTGas-~GIG~aia~~la~-----~G~~Vv~ 56 (267)
T 3u5t_A 27 NKVAIVTGAS-RGIGAAIAARLAS-----DGFTVVI 56 (267)
T ss_dssp CCEEEEESCS-SHHHHHHHHHHHH-----HTCEEEE
T ss_pred CCEEEEeCCC-CHHHHHHHHHHHH-----CCCEEEE
Confidence 4899999984 8999 99998888 8998875
No 320
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=40.01 E-value=76 Score=30.98 Aligned_cols=33 Identities=21% Similarity=0.177 Sum_probs=22.4
Q ss_pred cCCCEEEECCCCCCCcchhHHHHHHHHHHcCCCEEEE
Q 006689 395 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 431 (635)
Q Consensus 395 ~~~DGIllPGGfG~rg~eg~i~air~are~~iP~LGI 431 (635)
.++|||++.+...+ . ....++.+++.++|+.-+
T Consensus 57 ~~vdgiIi~~~~~~-~---~~~~~~~~~~~~iPvV~~ 89 (313)
T 3m9w_A 57 RGVDVLVIIPYNGQ-V---LSNVVKEAKQEGIKVLAY 89 (313)
T ss_dssp TTCSEEEEECSSTT-S---CHHHHHHHHTTTCEEEEE
T ss_pred cCCCEEEEeCCChh-h---hHHHHHHHHHCCCeEEEE
Confidence 58999999874322 1 234567777889998654
No 321
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=39.80 E-value=19 Score=35.90 Aligned_cols=32 Identities=0% Similarity=-0.108 Sum_probs=27.5
Q ss_pred CCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEec
Q 006689 35 NLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFG 72 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K 72 (635)
+=|-++||||- |||| ++.+.|-. .|.+|...-
T Consensus 10 ~GK~alVTGas-~GIG~aia~~la~-----~Ga~V~~~~ 42 (261)
T 4h15_A 10 RGKRALITAGT-KGAGAATVSLFLE-----LGAQVLTTA 42 (261)
T ss_dssp TTCEEEESCCS-SHHHHHHHHHHHH-----TTCEEEEEE
T ss_pred CCCEEEEeccC-cHHHHHHHHHHHH-----cCCEEEEEE
Confidence 45899999984 8999 99999999 999998753
No 322
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=39.37 E-value=1.3e+02 Score=28.54 Aligned_cols=84 Identities=14% Similarity=0.125 Sum_probs=45.1
Q ss_pred CccEEEEEeccCCCcch-HHHHHHHHHHccccceeeeEEEEecCCCCCccccCCChhhhhHHHHhc--cCCCEEEECCCC
Q 006689 330 EPVRIAMVGKYTGLSDA-YLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGGF 406 (635)
Q Consensus 330 ~~v~IalVGkY~~l~Da-Y~SI~~AL~~ag~~~~vkl~i~wi~s~~le~~~~~~~p~~y~~a~~~L--~~~DGIllPGGf 406 (635)
+..+||++- ....+. |..+++.++.+..+.+..+.+...+. + ++.-.+..+.+ .++||||+.+..
T Consensus 6 ~s~~Igvi~--~~~~~~~~~~~~~gi~~~~~~~g~~~~~~~~~~-~---------~~~~~~~~~~l~~~~vdgiIi~~~~ 73 (276)
T 3jy6_A 6 SSKLIAVIV--ANIDDYFSTELFKGISSILESRGYIGVLFDANA-D---------IEREKTLLRAIGSRGFDGLILQSFS 73 (276)
T ss_dssp CCCEEEEEE--SCTTSHHHHHHHHHHHHHHHTTTCEEEEEECTT-C---------HHHHHHHHHHHHTTTCSEEEEESSC
T ss_pred CCcEEEEEe--CCCCchHHHHHHHHHHHHHHHCCCEEEEEeCCC-C---------HHHHHHHHHHHHhCCCCEEEEecCC
Confidence 456899883 233444 34566666555554444433333221 1 11111122222 589999998743
Q ss_pred CCCcchhHHHHHHHHHHcCCCEEEEe
Q 006689 407 GNRGVQGKILAAKYAREHRIPYLGIC 432 (635)
Q Consensus 407 G~rg~eg~i~air~are~~iP~LGIC 432 (635)
. ...++.+.+.++|+.-+.
T Consensus 74 ~-------~~~~~~l~~~~iPvV~i~ 92 (276)
T 3jy6_A 74 N-------PQTVQEILHQQMPVVSVD 92 (276)
T ss_dssp C-------HHHHHHHHTTSSCEEEES
T ss_pred c-------HHHHHHHHHCCCCEEEEe
Confidence 2 345667777899987653
No 323
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=39.22 E-value=23 Score=34.50 Aligned_cols=33 Identities=9% Similarity=-0.015 Sum_probs=27.4
Q ss_pred CCCeEEEEccccc-cchh-hHHHHHHhcCcCCCCceeEEe
Q 006689 34 LNLQYMFLCLNEC-ACIN-FFSLFLVQNCQYHPNTHFNLF 71 (635)
Q Consensus 34 ~~~k~i~vtggv~-s~lg-s~g~ll~~~~~~~~g~~v~~~ 71 (635)
++.|.++||||-- +||| .+.+.|-. +|++|...
T Consensus 6 l~~k~vlVTGas~~~gIG~~ia~~l~~-----~G~~V~~~ 40 (261)
T 2wyu_A 6 LSGKKALVMGVTNQRSLGFAIAAKLKE-----AGAEVALS 40 (261)
T ss_dssp CTTCEEEEESCCSSSSHHHHHHHHHHH-----HTCEEEEE
T ss_pred CCCCEEEEECCCCCCcHHHHHHHHHHH-----CCCEEEEE
Confidence 3458899999964 8999 89998888 89998775
No 324
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=39.09 E-value=18 Score=36.56 Aligned_cols=31 Identities=10% Similarity=0.016 Sum_probs=26.9
Q ss_pred CeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEec
Q 006689 36 LQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFG 72 (635)
Q Consensus 36 ~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K 72 (635)
-|-++|||| -|||| ++.+.|-. .|.+|.+.=
T Consensus 29 gKvalVTGa-s~GIG~aiA~~la~-----~Ga~V~i~~ 60 (273)
T 4fgs_A 29 AKIAVITGA-TSGIGLAAAKRFVA-----EGARVFITG 60 (273)
T ss_dssp TCEEEEESC-SSHHHHHHHHHHHH-----TTCEEEEEE
T ss_pred CCEEEEeCc-CCHHHHHHHHHHHH-----CCCEEEEEE
Confidence 478899998 59999 99999999 999998753
No 325
>1np6_A Molybdopterin-guanine dinucleotide biosynthesis protein B; mixed alpha-beta fold, elongated beta-sheet, walker A motif, P-loop structural motif; 1.90A {Escherichia coli} SCOP: c.37.1.10 PDB: 1p9n_A
Probab=38.73 E-value=23 Score=33.29 Aligned_cols=38 Identities=8% Similarity=0.028 Sum_probs=27.5
Q ss_pred CeEEEEccccccchh------hHHHHHHhcCcCCCCceeEEeccCCc-cccC
Q 006689 36 LQYMFLCLNECACIN------FFSLFLVQNCQYHPNTHFNLFGLDPY-LNTD 80 (635)
Q Consensus 36 ~k~i~vtggv~s~lg------s~g~ll~~~~~~~~g~~v~~~K~DpY-lN~d 80 (635)
++.|.++| -||-| .|...|+. +|++|..+|.||- .++|
T Consensus 6 ~~~i~i~G--~sGsGKTTl~~~l~~~l~~-----~g~~v~~i~~~~~~~~id 50 (174)
T 1np6_A 6 IPLLAFAA--WSGTGKTTLLKKLIPALCA-----RGIRPGLIKHTHHDMDVD 50 (174)
T ss_dssp CCEEEEEC--CTTSCHHHHHHHHHHHHHH-----TTCCEEEEEECCC-----
T ss_pred ceEEEEEe--CCCCCHHHHHHHHHHhccc-----cCCceeEEeeCCCccccC
Confidence 68889999 78888 44555667 8999999999983 3555
No 326
>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}
Probab=38.58 E-value=19 Score=34.53 Aligned_cols=35 Identities=11% Similarity=0.094 Sum_probs=26.0
Q ss_pred CCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEeccC
Q 006689 35 NLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGLD 74 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~D 74 (635)
++|.++||||- |||| .+.+.|-. ..|++|.....+
T Consensus 3 ~~k~vlITGas-~gIG~~~a~~l~~----~~g~~v~~~~~~ 38 (244)
T 4e4y_A 3 AMANYLVTGGS-KGIGKAVVELLLQ----NKNHTVINIDIQ 38 (244)
T ss_dssp CCEEEEEETTT-SHHHHHHHHHHTT----STTEEEEEEESS
T ss_pred CCCeEEEeCCC-ChHHHHHHHHHHh----cCCcEEEEeccc
Confidence 47899999986 8999 78765543 168888876444
No 327
>2gk3_A Putative cytoplasmic protein; STM3548, structural genomics, PSI, P structure initiative; 2.25A {Salmonella typhimurium} SCOP: c.23.16.9
Probab=38.54 E-value=19 Score=35.84 Aligned_cols=72 Identities=19% Similarity=0.125 Sum_probs=43.2
Q ss_pred hHHHHHHHHHHccccceeeeEEEEecCCCCCccccCCChhhhhHHHHhccCCCEEEECCCCCC------------Ccchh
Q 006689 346 AYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGN------------RGVQG 413 (635)
Q Consensus 346 aY~SI~~AL~~ag~~~~vkl~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIllPGGfG~------------rg~eg 413 (635)
....+.++|+..++++.. ++..+. ++.+....+.|.++|.||+.+-... +..+.
T Consensus 41 ~~~~l~~aL~~~~~~v~~------~~~~~~--------~~~fp~~~~~L~~yDvIIl~~~~~~~l~~~~~~~~~~~~~~~ 106 (256)
T 2gk3_A 41 GATWLLECLRKGGVDIDY------MPAHTV--------QIAFPESIDELNRYDVIVISDIGSNTFLLQNETFYQLKIKPN 106 (256)
T ss_dssp SCHHHHHHHHHTTCEEEE------ECHHHH--------HHCCCCSHHHHHTCSEEEEESCCHHHHHSCHHHHTTCCCCCC
T ss_pred cHHHHHHHHHhcCceEEE------Eecccc--------hhhCCcChhHHhcCCEEEEeCCchhhcccccccccccccChH
Confidence 345688899987766543 221100 0001001246889999999984321 01144
Q ss_pred HHHHHHHHHHcCCCEEEE
Q 006689 414 KILAAKYAREHRIPYLGI 431 (635)
Q Consensus 414 ~i~air~are~~iP~LGI 431 (635)
..++++...+++..+++|
T Consensus 107 ~~~~l~~~V~~GGgll~i 124 (256)
T 2gk3_A 107 ALESIKEYVKNGGGLLMI 124 (256)
T ss_dssp HHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHhCCEEEEE
Confidence 678888777789999999
No 328
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=37.99 E-value=25 Score=33.65 Aligned_cols=34 Identities=6% Similarity=-0.005 Sum_probs=29.5
Q ss_pred CeEEEEccccccchh------hHHHHHHhcCcCCCCceeEEeccCC
Q 006689 36 LQYMFLCLNECACIN------FFSLFLVQNCQYHPNTHFNLFGLDP 75 (635)
Q Consensus 36 ~k~i~vtggv~s~lg------s~g~ll~~~~~~~~g~~v~~~K~Dp 75 (635)
+|.|.|+++ -.|.| .|+..|.. +|++|-.+..||
T Consensus 2 ~~vi~v~s~-kgGvGKTt~a~~LA~~la~-----~g~~VlliD~D~ 41 (260)
T 3q9l_A 2 ARIIVVTSG-KGGVGKTTSSAAIATGLAQ-----KGKKTVVIDFAI 41 (260)
T ss_dssp CEEEEEECS-STTSSHHHHHHHHHHHHHH-----TTCCEEEEECCC
T ss_pred CeEEEEECC-CCCCcHHHHHHHHHHHHHh-----CCCcEEEEECCC
Confidence 688888875 47778 88999999 999999999999
No 329
>1vi6_A 30S ribosomal protein S2P; structural genomics, ribosome; 1.95A {Archaeoglobus fulgidus} SCOP: c.23.15.1 PDB: 1vi5_A
Probab=37.87 E-value=1.6e+02 Score=28.78 Aligned_cols=79 Identities=20% Similarity=0.205 Sum_probs=49.6
Q ss_pred CccEEEEEeccCCCcchHHHHHHHHHHccccceeeeEEEEecCCCCCccccCCChhhhhHHHHhccCCCEEEECCCCCCC
Q 006689 330 EPVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNR 409 (635)
Q Consensus 330 ~~v~IalVGkY~~l~DaY~SI~~AL~~ag~~~~vkl~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIllPGGfG~r 409 (635)
++-+|.+||-- ..+-..|.++-+.+|+... .=.|+.-. |+.... +.+..+|.|+|.. +
T Consensus 67 ~~~~iLfVgTk---~~~~~~V~~~A~~~g~~~v---~~rwlgG~-LTN~~~-----------~~f~~PdlliV~D-p--- 124 (208)
T 1vi6_A 67 EPSKILLVAAR---QYAHKPVQMFSKVVGSDYI---VGRFIPGT-LTNPML-----------SEYREPEVVFVND-P--- 124 (208)
T ss_dssp CGGGEEEEECS---GGGHHHHHHHHHHHCCEEE---ESSCCTTT-TTCTTS-----------TTCCCCSEEEESC-T---
T ss_pred CCCEEEEEeCC---HHHHHHHHHHHHHhCCeee---cCEECCCc-ccChhh-----------HhhCCCCEEEEEC-C---
Confidence 44579999821 2244566676666666532 23576532 222111 2356799999986 2
Q ss_pred cchhHHHHHHHHHHcCCCEEEEe
Q 006689 410 GVQGKILAAKYAREHRIPYLGIC 432 (635)
Q Consensus 410 g~eg~i~air~are~~iP~LGIC 432 (635)
. ....|+++|..-+||+.|+|
T Consensus 125 ~--~e~~ai~EA~~l~IPvIalv 145 (208)
T 1vi6_A 125 A--IDKQAVSEATAVGIPVVALC 145 (208)
T ss_dssp T--TTHHHHHHHHHTTCCEEEEE
T ss_pred C--cchhHHHHHHHhCCCEEEEe
Confidence 1 23568999999999999999
No 330
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=37.70 E-value=25 Score=33.05 Aligned_cols=36 Identities=8% Similarity=-0.117 Sum_probs=27.5
Q ss_pred CCCeEEEEccccccchh-hHHHHHHhcCcCCC--CceeEEeccCC
Q 006689 34 LNLQYMFLCLNECACIN-FFSLFLVQNCQYHP--NTHFNLFGLDP 75 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~--g~~v~~~K~Dp 75 (635)
+++|-|+|||| -++|| .+.+.|.. + |++|..+-.+|
T Consensus 2 ~~~~~ilVtGa-sG~iG~~l~~~l~~-----~~~g~~V~~~~r~~ 40 (253)
T 1xq6_A 2 ANLPTVLVTGA-SGRTGQIVYKKLKE-----GSDKFVAKGLVRSA 40 (253)
T ss_dssp CSCCEEEEEST-TSHHHHHHHHHHHH-----TTTTCEEEEEESCH
T ss_pred CCCCEEEEEcC-CcHHHHHHHHHHHh-----cCCCcEEEEEEcCC
Confidence 44678999998 47888 88888878 7 89988765543
No 331
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=37.50 E-value=25 Score=33.27 Aligned_cols=35 Identities=3% Similarity=-0.111 Sum_probs=27.3
Q ss_pred CCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEeccCC
Q 006689 35 NLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGLDP 75 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~Dp 75 (635)
+.|-|+||||- ++|| .+.+.|.. +|++|..+-.+|
T Consensus 20 ~~~~ilVtGat-G~iG~~l~~~L~~-----~G~~V~~~~R~~ 55 (236)
T 3e8x_A 20 QGMRVLVVGAN-GKVARYLLSELKN-----KGHEPVAMVRNE 55 (236)
T ss_dssp -CCEEEEETTT-SHHHHHHHHHHHH-----TTCEEEEEESSG
T ss_pred CCCeEEEECCC-ChHHHHHHHHHHh-----CCCeEEEEECCh
Confidence 34669999874 8899 88888888 899999875543
No 332
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=36.98 E-value=88 Score=31.65 Aligned_cols=89 Identities=4% Similarity=-0.068 Sum_probs=50.8
Q ss_pred CccEEEEEeccCCCcchHH----HHHHHHHHcc-ccceeeeEEEEecCCCCCccccCCChhhhhHHHHhccCCCEEEECC
Q 006689 330 EPVRIAMVGKYTGLSDAYL----SILKALLHAS-VDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPG 404 (635)
Q Consensus 330 ~~v~IalVGkY~~l~DaY~----SI~~AL~~ag-~~~~vkl~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIllPG 404 (635)
+..||.|++.-. .+| +. .+.+.|+..| +++.+. . +....+ +++.|. +.|+++|.||+.-
T Consensus 3 ~~~kvLiv~G~~-~H~-~~~~~~~l~~~l~~~g~f~V~~~----~-d~~~~~------d~~~f~---~~L~~~D~vV~~~ 66 (281)
T 4e5v_A 3 KPIKTLLITGQN-NHN-WQVSHVVLKQILENSGRFDVDFV----I-SPEQGK------DMSGFV---LDFSPYQLVVLDY 66 (281)
T ss_dssp CCEEEEEEESCC-SSC-HHHHHHHHHHHHHHTTSEEEEEE----E-CCCTTS------CCTTCC---CCCTTCSEEEECC
T ss_pred CceEEEEEcCCC-CCC-hHHHHHHHHHHHHhcCCEEEEEE----e-CCcccc------chhHHh---hhhhcCCEEEEeC
Confidence 457899887544 333 33 3445666666 665553 1 111000 111121 2588999999644
Q ss_pred CCCCCcchhHHHHHHHHHHcCCCEEEEehhH
Q 006689 405 GFGNRGVQGKILAAKYAREHRIPYLGICLGM 435 (635)
Q Consensus 405 GfG~rg~eg~i~air~are~~iP~LGICLGm 435 (635)
-|+.-.+...+++....+++.+++|+.-+.
T Consensus 67 -~~~~l~~~~~~~l~~yV~~Ggglv~~H~a~ 96 (281)
T 4e5v_A 67 -NGDSWPEETNRRFLEYVQNGGGVVIYHAAD 96 (281)
T ss_dssp -CSSCCCHHHHHHHHHHHHTTCEEEEEGGGG
T ss_pred -CCCcCCHHHHHHHHHHHHcCCCEEEEeccc
Confidence 333323455667766677899999998644
No 333
>3d02_A Putative LACI-type transcriptional regulator; periplasmic sugar-binding protein, structura genomics; HET: MSE GOL; 1.30A {Klebsiella pneumoniae subsp}
Probab=36.94 E-value=1.5e+02 Score=28.34 Aligned_cols=88 Identities=11% Similarity=0.044 Sum_probs=44.3
Q ss_pred CccEEEEEeccCCCcchH-HHHHHHHHHccccceeeeEEEEecCCCCCccccCCChhhhhHHHHhc--cCCCEEEECCCC
Q 006689 330 EPVRIAMVGKYTGLSDAY-LSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGGF 406 (635)
Q Consensus 330 ~~v~IalVGkY~~l~DaY-~SI~~AL~~ag~~~~vkl~i~wi~s~~le~~~~~~~p~~y~~a~~~L--~~~DGIllPGGf 406 (635)
++.+|+++-.. ..+.| ..+.+.++.+.-+.+..+ .++.... .++++-.+..+.+ .++|||++.+.
T Consensus 3 ~~~~Ig~i~~~--~~~~~~~~~~~g~~~~~~~~g~~~--~~~~~~~-------~~~~~~~~~~~~l~~~~vdgiii~~~- 70 (303)
T 3d02_A 3 AEKTVVNISKV--DGMPWFNRMGEGVVQAGKEFNLNA--SQVGPSS-------TDAPQQVKIIEDLIARKVDAITIVPN- 70 (303)
T ss_dssp -CEEEEEECSC--SSCHHHHHHHHHHHHHHHHTTEEE--EEECCSS-------SCHHHHHHHHHHHHHTTCSEEEECCS-
T ss_pred CceEEEEEecc--CCChHHHHHHHHHHHHHHHcCCEE--EEECCCC-------CCHHHHHHHHHHHHHcCCCEEEEecC-
Confidence 34689998432 23344 445555555444433332 2222111 1222222222222 57999999763
Q ss_pred CCCcchhHHHHHHHHHHcCCCEEEEe
Q 006689 407 GNRGVQGKILAAKYAREHRIPYLGIC 432 (635)
Q Consensus 407 G~rg~eg~i~air~are~~iP~LGIC 432 (635)
+ .......++.+.+.++|+.-+.
T Consensus 71 -~--~~~~~~~~~~~~~~~ipvV~~~ 93 (303)
T 3d02_A 71 -D--ANVLEPVFKKARDAGIVVLTNE 93 (303)
T ss_dssp -C--HHHHHHHHHHHHHTTCEEEEES
T ss_pred -C--hHHHHHHHHHHHHCCCeEEEEe
Confidence 1 1223345677778899987654
No 334
>2rgy_A Transcriptional regulator, LACI family; 11011J, NYSGXRC, transctiptional regulator, SUG binding protein, structural genomics, PSI-2; 2.05A {Burkholderia phymatum}
Probab=36.94 E-value=1.3e+02 Score=29.03 Aligned_cols=32 Identities=9% Similarity=-0.005 Sum_probs=21.5
Q ss_pred cCCCEEEECCCCCCCcchhHHHHHHHHHHcCCCEEEEe
Q 006689 395 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGIC 432 (635)
Q Consensus 395 ~~~DGIllPGGfG~rg~eg~i~air~are~~iP~LGIC 432 (635)
.++|||++.+...+ . ..++.+.+.++|+.-+.
T Consensus 66 ~~vdgiIi~~~~~~---~---~~~~~l~~~~iPvV~~~ 97 (290)
T 2rgy_A 66 RDCDGVVVISHDLH---D---EDLDELHRMHPKMVFLN 97 (290)
T ss_dssp TTCSEEEECCSSSC---H---HHHHHHHHHCSSEEEES
T ss_pred cCccEEEEecCCCC---H---HHHHHHhhcCCCEEEEc
Confidence 58999999874322 2 34555666799987664
No 335
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=36.42 E-value=1.1e+02 Score=29.21 Aligned_cols=31 Identities=23% Similarity=0.376 Sum_probs=21.5
Q ss_pred cCCCEEEECCCCCCCcchhHHHHHHHHHHcCCCEEEE
Q 006689 395 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 431 (635)
Q Consensus 395 ~~~DGIllPGGfG~rg~eg~i~air~are~~iP~LGI 431 (635)
.++||||+.+...+. ..++.+.+.++|+.-+
T Consensus 68 ~~vdgiIi~~~~~~~------~~~~~l~~~~iPvV~~ 98 (292)
T 3k4h_A 68 RQIGGIILLYSREND------RIIQYLHEQNFPFVLI 98 (292)
T ss_dssp TCCCEEEESCCBTTC------HHHHHHHHTTCCEEEE
T ss_pred CCCCEEEEeCCCCCh------HHHHHHHHCCCCEEEE
Confidence 589999998743221 3566677789998654
No 336
>2obn_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, unknown function; HET: PG4; 2.30A {Anabaena variabilis}
Probab=35.89 E-value=2.3e+02 Score=29.70 Aligned_cols=79 Identities=14% Similarity=0.050 Sum_probs=50.7
Q ss_pred CCCcEEEEe-eCCcccccCcchHHHHHHHhhhhcCCCCEEEEeeeeeeeecCCCccccCCccchhhhhhc--------CC
Q 006689 172 GPVDVCVIE-LGGTIGDIESMPFIEALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRG--------QG 242 (635)
Q Consensus 172 ~~~dv~i~E-iGGTvGdies~pf~ea~rq~~~~~g~~n~~~ihv~~vp~~~~~~e~KtKptQ~svk~Lrs--------~G 242 (635)
+++|+++|| -||-.-=+ +.-.+ .+-....+.-++++|-.=...+..--+..--|-+|.+...+. .|
T Consensus 224 ~~~d~vlVEGqGgl~~P~-~~~t~----~ll~g~~p~~vILv~~~~~g~i~~~~~~~~p~l~~~i~t~e~l~~~~~~~~~ 298 (349)
T 2obn_A 224 KNYDILHIEGQGSLLHPG-STATL----PLIRGSQPTQLVLVHRAGQTHNGNNPHVPIPPLPEVIRLYETVASGGGAFGT 298 (349)
T ss_dssp TTCSEEEECCCCCTTSTT-CCTHH----HHHHHHCCSEEEEEEETTCCBCSSCTTSBCCCHHHHHHHHHHHHHTTTTSCC
T ss_pred cCCCEEEEeCCCcccCcC-hHhHH----HHHHHcCCCeEEEEECCCCceECCCCccCCCCHHHHHHHHHHHHHhhccCCC
Confidence 468999999 55555333 33233 333444556699999866666654445555666766655554 68
Q ss_pred CcccEEEEeeCCC
Q 006689 243 LTPNILACRSTVA 255 (635)
Q Consensus 243 i~pd~iv~R~~~~ 255 (635)
+++-+|++-....
T Consensus 299 ~~V~Gi~lN~~~~ 311 (349)
T 2obn_A 299 VPVVGIALNTAHL 311 (349)
T ss_dssp CCEEEEEEECTTS
T ss_pred CcEEEEEEECCCC
Confidence 9999999876553
No 337
>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae}
Probab=35.41 E-value=22 Score=38.04 Aligned_cols=36 Identities=22% Similarity=0.395 Sum_probs=27.4
Q ss_pred cCCCEEEECCCCCCCcchhHHHHHHHHHHcCC-CEEEEehhH
Q 006689 395 KGADGILVPGGFGNRGVQGKILAAKYAREHRI-PYLGICLGM 435 (635)
Q Consensus 395 ~~~DGIllPGGfG~rg~eg~i~air~are~~i-P~LGICLGm 435 (635)
.++|.||+-||=|+ ++.+++.+...++ |+|||=+|.
T Consensus 113 ~~~DlVIvlGGDGT-----lL~aa~~~~~~~vpPiLGIN~G~ 149 (388)
T 3afo_A 113 NRTDLLVTLGGDGT-----ILHGVSMFGNTQVPPVLAFALGT 149 (388)
T ss_dssp HHCSEEEEEESHHH-----HHHHHHTTTTSCCCCEEEEECSS
T ss_pred cCCCEEEEEeCcHH-----HHHHHHHhcccCCCeEEEEECCC
Confidence 46899999998432 5667777766678 899998873
No 338
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=35.11 E-value=33 Score=31.13 Aligned_cols=33 Identities=9% Similarity=-0.073 Sum_probs=26.1
Q ss_pred eEEEEccccccchh-hHHHHHHhcCcCCCCceeEEeccCC
Q 006689 37 QYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGLDP 75 (635)
Q Consensus 37 k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~Dp 75 (635)
|-|+||||- ++|| .+.+.|.. +|++|..+-.+|
T Consensus 4 ~~ilVtGat-G~iG~~l~~~l~~-----~g~~V~~~~r~~ 37 (206)
T 1hdo_A 4 KKIAIFGAT-GQTGLTTLAQAVQ-----AGYEVTVLVRDS 37 (206)
T ss_dssp CEEEEESTT-SHHHHHHHHHHHH-----TTCEEEEEESCG
T ss_pred CEEEEEcCC-cHHHHHHHHHHHH-----CCCeEEEEEeCh
Confidence 568999874 7888 88888888 899998875544
No 339
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=35.03 E-value=28 Score=34.74 Aligned_cols=31 Identities=13% Similarity=0.086 Sum_probs=26.5
Q ss_pred CCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEe
Q 006689 35 NLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLF 71 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~ 71 (635)
+-|.++||||- |||| ++.+.|-. .|.+|...
T Consensus 6 ~gKvalVTGas-~GIG~aia~~la~-----~Ga~Vv~~ 37 (258)
T 4gkb_A 6 QDKVVIVTGGA-SGIGGAISMRLAE-----ERAIPVVF 37 (258)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHH-----TTCEEEEE
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHH-----cCCEEEEE
Confidence 35899999985 9999 99999999 89988764
No 340
>2ph1_A Nucleotide-binding protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Archaeoglobus fulgidus dsm 4304} PDB: 3kb1_A*
Probab=34.91 E-value=35 Score=33.29 Aligned_cols=37 Identities=3% Similarity=0.021 Sum_probs=31.5
Q ss_pred CCeEEEEccccccchh------hHHHHHHhcCcCCCCceeEEeccCCcc
Q 006689 35 NLQYMFLCLNECACIN------FFSLFLVQNCQYHPNTHFNLFGLDPYL 77 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg------s~g~ll~~~~~~~~g~~v~~~K~DpYl 77 (635)
++|.|.|+++ -.|.| .|+..|.. +|++|-.+..||.-
T Consensus 17 ~~~vI~v~s~-kGGvGKTT~a~nLA~~la~-----~G~~VlliD~D~~~ 59 (262)
T 2ph1_A 17 IKSRIAVMSG-KGGVGKSTVTALLAVHYAR-----QGKKVGILDADFLG 59 (262)
T ss_dssp CSCEEEEECS-SSCTTHHHHHHHHHHHHHH-----TTCCEEEEECCSSC
T ss_pred CCeEEEEEcC-CCCCCHHHHHHHHHHHHHH-----CCCeEEEEeCCCCC
Confidence 3788888876 46788 78999999 99999999999986
No 341
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*
Probab=34.88 E-value=29 Score=33.51 Aligned_cols=36 Identities=11% Similarity=0.019 Sum_probs=25.8
Q ss_pred CCCCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEe
Q 006689 33 PLNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLF 71 (635)
Q Consensus 33 ~~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~ 71 (635)
+++.|.++||||- |||| .+.+.|-. +..+|++|...
T Consensus 3 ~l~~k~~lVTGas-~gIG~~ia~~l~~--~~~~G~~V~~~ 39 (259)
T 1oaa_A 3 GLGCAVCVLTGAS-RGFGRALAPQLAR--LLSPGSVMLVS 39 (259)
T ss_dssp CCBSEEEEESSCS-SHHHHHHHHHHHT--TBCTTCEEEEE
T ss_pred CCCCcEEEEeCCC-ChHHHHHHHHHHH--hhcCCCeEEEE
Confidence 4556899999985 8999 88877764 00148888765
No 342
>1vjn_A Zn-dependent hydrolase of metallo-beta-lactamase superfamily TM0207; metallo-hydrolase/oxidoreductase fold, structural genomics; 2.00A {Thermotoga maritima} SCOP: d.157.1.4
Probab=34.56 E-value=41 Score=32.34 Aligned_cols=71 Identities=18% Similarity=0.169 Sum_probs=49.0
Q ss_pred CCcEEEEeeCCcccccCcchHHHHHHHhhhhcCCCCEEEEeeeeeeeecCCCccccCCccchhhhhhcCCCcccEEEEee
Q 006689 173 PVDVCVIELGGTIGDIESMPFIEALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRS 252 (635)
Q Consensus 173 ~~dv~i~EiGGTvGdies~pf~ea~rq~~~~~g~~n~~~ihv~~vp~~~~~~e~KtKptQ~svk~Lrs~Gi~pd~iv~R~ 252 (635)
++|++++|+||. + -+-.-|| .++..+++...++.+|.+-- +++ ....|.+.-.+++++.++.++-+.++.
T Consensus 138 ~~Dvlil~~g~~-~---h~~~~~a-~~~~~~~~~k~vi~~H~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (220)
T 1vjn_A 138 EIDVLLVPVGGT-Y---TIGPKEA-KEVADLLNAKVIIPMHYKTK-YLK----FNLLPVDDFLKLFDSYERVGNILELFE 207 (220)
T ss_dssp CCSEEEEECCSS-S---SCCHHHH-HHHHHHTTCSEEEEESCCCS-SCC----TTCCCTHHHHTTSSCCEECCSEEEESS
T ss_pred CCCEEEEcCCCc-C---cCCHHHH-HHHHHhcCCCEEEEEecccc-ccc----CCchhHHHHHHHHHhcCCCccceEEec
Confidence 589999999875 2 2333333 34445677889999998764 332 125678888888888888877777665
Q ss_pred C
Q 006689 253 T 253 (635)
Q Consensus 253 ~ 253 (635)
.
T Consensus 208 ~ 208 (220)
T 1vjn_A 208 K 208 (220)
T ss_dssp C
T ss_pred C
Confidence 4
No 343
>2x7x_A Sensor protein; transferase, sensor histidine kinase; HET: FRU; 2.64A {Bacteroides thetaiotaomicron}
Probab=34.52 E-value=2.2e+02 Score=27.94 Aligned_cols=85 Identities=14% Similarity=0.178 Sum_probs=43.9
Q ss_pred CccEEEEEeccCCCcchHH-HHHHHHHHccccc-eeeeEEEEecCCCCCccccCCChhhhhHHHHhc--cCCCEEEECCC
Q 006689 330 EPVRIAMVGKYTGLSDAYL-SILKALLHASVDL-RKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGG 405 (635)
Q Consensus 330 ~~v~IalVGkY~~l~DaY~-SI~~AL~~ag~~~-~vkl~i~wi~s~~le~~~~~~~p~~y~~a~~~L--~~~DGIllPGG 405 (635)
++.+||++-. . .+.|. .+++.++.+..+. +..+.+ .++.. +++.-.+..+.+ .++||||+.+.
T Consensus 5 ~~~~Igvi~~-~--~~~~~~~~~~gi~~~a~~~~g~~l~i--~~~~~--------~~~~~~~~i~~l~~~~vdgiIi~~~ 71 (325)
T 2x7x_A 5 PHFRIGVAQC-S--DDSWRHKMNDEILREAMFYNGVSVEI--RSAGD--------DNSKQAEDVHYFMDEGVDLLIISAN 71 (325)
T ss_dssp -CCEEEEEES-C--CSHHHHHHHHHHHHHHTTSSSCEEEE--EECTT--------CHHHHHHHHHHHHHTTCSEEEECCS
T ss_pred CCeEEEEEec-C--CCHHHHHHHHHHHHHHHHcCCcEEEE--eCCCC--------CHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 3568998832 2 34444 4666666554444 443332 33221 111111222222 58999999863
Q ss_pred CCCCcchhHHHHHHHHHHcCCCEEEE
Q 006689 406 FGNRGVQGKILAAKYAREHRIPYLGI 431 (635)
Q Consensus 406 fG~rg~eg~i~air~are~~iP~LGI 431 (635)
.. +.....++.+.+.++|+.-+
T Consensus 72 ~~----~~~~~~~~~~~~~~iPvV~~ 93 (325)
T 2x7x_A 72 EA----APMTPIVEEAYQKGIPVILV 93 (325)
T ss_dssp SH----HHHHHHHHHHHHTTCCEEEE
T ss_pred CH----HHHHHHHHHHHHCCCeEEEe
Confidence 21 12234566777789998765
No 344
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=34.26 E-value=30 Score=34.29 Aligned_cols=32 Identities=3% Similarity=-0.095 Sum_probs=25.3
Q ss_pred CeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEecc
Q 006689 36 LQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGL 73 (635)
Q Consensus 36 ~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~ 73 (635)
.|-|+||||- ++|| .+.+.|.. +|++|..+-.
T Consensus 3 ~~~vlVtGat-G~iG~~l~~~L~~-----~G~~V~~~~r 35 (345)
T 2z1m_A 3 GKRALITGIR-GQDGAYLAKLLLE-----KGYEVYGADR 35 (345)
T ss_dssp CCEEEEETTT-SHHHHHHHHHHHH-----TTCEEEEECS
T ss_pred CCEEEEECCC-ChHHHHHHHHHHH-----CCCEEEEEEC
Confidence 4669999984 7888 88888888 8999887643
No 345
>3fwy_A Light-independent protochlorophyllide reductase I ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2}
Probab=34.23 E-value=31 Score=35.39 Aligned_cols=39 Identities=13% Similarity=0.045 Sum_probs=34.3
Q ss_pred CCeEEEEccccccchh------hHHHHHHhcCcCCCCceeEEeccCCccccC
Q 006689 35 NLQYMFLCLNECACIN------FFSLFLVQNCQYHPNTHFNLFGLDPYLNTD 80 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg------s~g~ll~~~~~~~~g~~v~~~K~DpYlN~d 80 (635)
++|.|-|+| =.|+| .|+..|.. +|+||-.|=+||+.|.-
T Consensus 47 ~aKVIAIaG--KGGVGKTTtavNLA~aLA~-----~GkkVllID~Dpq~~s~ 91 (314)
T 3fwy_A 47 GAKVFAVYG--KGGIGKSTTSSNLSAAFSI-----LGKRVLQIGCDPKHDST 91 (314)
T ss_dssp CCEEEEEEC--STTSSHHHHHHHHHHHHHH-----TTCCEEEEEESSSCCTT
T ss_pred CceEEEEEC--CCccCHHHHHHHHHHHHHH-----CCCeEEEEecCCCCccc
Confidence 479999995 77889 79999999 99999999999987743
No 346
>3rht_A (gatase1)-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.83A {Planctomyces limnophilus}
Probab=34.04 E-value=1.2e+02 Score=30.45 Aligned_cols=81 Identities=15% Similarity=0.042 Sum_probs=49.9
Q ss_pred cEEEEEeccCCCcchHHHHHHHHHHccccceeeeEEEEecCCCCCccccCCChhhhhHHHHhccCCCEEEECCCCCCCcc
Q 006689 332 VRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRGV 411 (635)
Q Consensus 332 v~IalVGkY~~l~DaY~SI~~AL~~ag~~~~vkl~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIllPGGfG~rg~ 411 (635)
.+|.+|+.-. ..+.-..+.++|+..|+++.+ ++..++.. ++ +.|.++|.||++.-....-.
T Consensus 5 ~~vLiV~g~~-~~~~a~~l~~aL~~~g~~V~~------i~~~~~~~-----~~-------~~L~~yDvIIl~d~~~~~l~ 65 (259)
T 3rht_A 5 TRVLYCGDTS-LETAAGYLAGLMTSWQWEFDY------IPSHVGLD-----VG-------ELLAKQDLVILSDYPAERMT 65 (259)
T ss_dssp -CEEEEESSC-TTTTHHHHHHHHHHTTCCCEE------ECTTSCBC-----SS-------HHHHTCSEEEEESCCGGGBC
T ss_pred ceEEEECCCC-chhHHHHHHHHHHhCCceEEE------eccccccc-----Ch-------hHHhcCCEEEEcCCccccCC
Confidence 4788886321 233446688899999988765 55555421 11 56889999999862221123
Q ss_pred hhHHHHHHHHHHcCCCEEEE
Q 006689 412 QGKILAAKYAREHRIPYLGI 431 (635)
Q Consensus 412 eg~i~air~are~~iP~LGI 431 (635)
+..+++++...+++-=++.+
T Consensus 66 ~~~~~~L~~yV~~GGgLi~~ 85 (259)
T 3rht_A 66 AQAIDQLVTMVKAGCGLVML 85 (259)
T ss_dssp HHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHhCCeEEEe
Confidence 45667777666667555555
No 347
>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...
Probab=33.94 E-value=24 Score=36.01 Aligned_cols=30 Identities=7% Similarity=-0.006 Sum_probs=25.3
Q ss_pred CeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEe
Q 006689 36 LQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLF 71 (635)
Q Consensus 36 ~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~ 71 (635)
.|.|+||||- |||| .+.+.|-. +|++|..+
T Consensus 2 ~k~vlVTGas-~GIG~ala~~L~~-----~G~~v~~v 32 (327)
T 1jtv_A 2 RTVVLITGCS-SGIGLHLAVRLAS-----DPSQSFKV 32 (327)
T ss_dssp CEEEEESCCS-SHHHHHHHHHHHT-----CTTCCEEE
T ss_pred CCEEEEECCC-CHHHHHHHHHHHH-----CCCceEEE
Confidence 4789999985 8999 99999999 89887654
No 348
>3qk7_A Transcriptional regulators; structural genomics, NEW YORK structural genomix research CO NYSGXRC, PSI-2, protein structur initiative; 2.70A {Yersinia pestis}
Probab=33.87 E-value=1.3e+02 Score=29.07 Aligned_cols=32 Identities=16% Similarity=0.435 Sum_probs=21.9
Q ss_pred cCCCEEEECCCCCCCcchhHHHHHHHHHHcCCCEEEEe
Q 006689 395 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGIC 432 (635)
Q Consensus 395 ~~~DGIllPGGfG~rg~eg~i~air~are~~iP~LGIC 432 (635)
.++||||+.+...+. ..++.+.+.++|+.-+-
T Consensus 64 ~~vdGiIi~~~~~~~------~~~~~l~~~~iPvV~~~ 95 (294)
T 3qk7_A 64 RRVDALIVAHTQPED------FRLQYLQKQNFPFLALG 95 (294)
T ss_dssp TCCSEEEECSCCSSC------HHHHHHHHTTCCEEEES
T ss_pred CCCCEEEEeCCCCCh------HHHHHHHhCCCCEEEEC
Confidence 489999998753322 44666777789986553
No 349
>3h75_A Periplasmic sugar-binding domain protein; protein structure initiative II (PSI II), sugar binding PROT alpha/beta fold; 1.60A {Pseudomonas fluorescens pf-5}
Probab=33.60 E-value=50 Score=33.04 Aligned_cols=85 Identities=16% Similarity=0.135 Sum_probs=45.6
Q ss_pred ccEEEEEeccCCCcc-hH-HHHHHHHHHccccceeeeEEEEecCCCCCccccCCChhhhh-HHHHhcc---CCCEEEECC
Q 006689 331 PVRIAMVGKYTGLSD-AY-LSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYK-AAWKLLK---GADGILVPG 404 (635)
Q Consensus 331 ~v~IalVGkY~~l~D-aY-~SI~~AL~~ag~~~~vkl~i~wi~s~~le~~~~~~~p~~y~-~a~~~L~---~~DGIllPG 404 (635)
..+|+++-. ...+ .| ..+.+.++.++-+.+..+.+. ++.. +++.-. .....+. ++|||++.+
T Consensus 3 ~~~Ig~i~p--~~~~~~f~~~~~~g~~~~a~~~g~~~~~~--~~~~--------~~~~~~~~i~~~i~~~~~vDgiIi~~ 70 (350)
T 3h75_A 3 LTSVVFLNP--GNSTETFWVSYSQFMQAAARDLGLDLRIL--YAER--------DPQNTLQQARELFQGRDKPDYLMLVN 70 (350)
T ss_dssp CCEEEEEEC--SCTTCHHHHHHHHHHHHHHHHHTCEEEEE--ECTT--------CHHHHHHHHHHHHHSSSCCSEEEEEC
T ss_pred CCEEEEECC--CCCCChHHHHHHHHHHHHHHHcCCeEEEE--ECCC--------CHHHHHHHHHHHHhcCCCCCEEEEeC
Confidence 357888832 2333 44 456666666555555443333 3221 111111 1222333 899999975
Q ss_pred CCCCCcchhHHHHHHHHHHcCCCEEEEe
Q 006689 405 GFGNRGVQGKILAAKYAREHRIPYLGIC 432 (635)
Q Consensus 405 GfG~rg~eg~i~air~are~~iP~LGIC 432 (635)
. .. .....++.+.+.++|+.-+.
T Consensus 71 -~-~~---~~~~~~~~~~~~giPvV~~~ 93 (350)
T 3h75_A 71 -E-QY---VAPQILRLSQGSGIKLFIVN 93 (350)
T ss_dssp -C-SS---HHHHHHHHHTTSCCEEEEEE
T ss_pred -c-hh---hHHHHHHHHHhCCCcEEEEc
Confidence 1 11 23456777788899988764
No 350
>3bbl_A Regulatory protein of LACI family; protein structure initiative II, PSI-II, NYSGXRC, transcript regulator, periplasmic binding protein; 2.35A {Chloroflexus aggregans}
Probab=33.43 E-value=1.2e+02 Score=29.05 Aligned_cols=32 Identities=13% Similarity=0.298 Sum_probs=21.3
Q ss_pred cCCCEEEECCCCCCCcchhHHHHHHHHHHcCCCEEEEe
Q 006689 395 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGIC 432 (635)
Q Consensus 395 ~~~DGIllPGGfG~rg~eg~i~air~are~~iP~LGIC 432 (635)
.++||||+.+...+. ..++.+.+.++|+.-+.
T Consensus 63 ~~vdgiIi~~~~~~~------~~~~~l~~~~iPvV~~~ 94 (287)
T 3bbl_A 63 GNVDGFVLSSINYND------PRVQFLLKQKFPFVAFG 94 (287)
T ss_dssp TCCSEEEECSCCTTC------HHHHHHHHTTCCEEEES
T ss_pred CCCCEEEEeecCCCc------HHHHHHHhcCCCEEEEC
Confidence 579999997743221 34556667789987653
No 351
>2qh8_A Uncharacterized protein; conserved domain protein, structural genomics, PSI-2, MCSG, BIG_563.1, protein structure initiative; HET: HIS; 2.20A {Vibrio cholerae o1 biovar eltor str} PDB: 3lkv_A*
Probab=33.16 E-value=91 Score=30.55 Aligned_cols=83 Identities=14% Similarity=0.046 Sum_probs=44.4
Q ss_pred cEEEEEeccCCC--cchHHHHHHHHHHccccceeeeEEEEecCCCCCccccCCChhhhhHHHHhccCCCEEEECCCCCCC
Q 006689 332 VRIAMVGKYTGL--SDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNR 409 (635)
Q Consensus 332 v~IalVGkY~~l--~DaY~SI~~AL~~ag~~~~vkl~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIllPGGfG~r 409 (635)
-||++++.-... .+-+....++|+..|+++. ..|+... + +.+..+.+.+..+|+|++++ |.
T Consensus 141 ~~I~~i~~~~~~~~~~r~~g~~~al~~~gi~~~----~~~~~~~--~--------~~~~~~~~l~~~~dai~~~~---D~ 203 (302)
T 2qh8_A 141 KSIGVVYNPGEANAVSLMELLKLSAAKHGIKLV----EATALKS--A--------DVQSATQAIAEKSDVIYALI---DN 203 (302)
T ss_dssp CEEEEEECTTCHHHHHHHHHHHHHHHHTTCEEE----EEECSSG--G--------GHHHHHHHHGGGCSEEEECS---CH
T ss_pred cEEEEEecCCCcchHHHHHHHHHHHHHcCCEEE----EEecCCh--H--------HHHHHHHHHhccCCEEEECC---cH
Confidence 389999532211 1123445667777776532 3344321 1 12333334457899999976 22
Q ss_pred cchhHHHHH-HHHHHcCCCEEEE
Q 006689 410 GVQGKILAA-KYAREHRIPYLGI 431 (635)
Q Consensus 410 g~eg~i~ai-r~are~~iP~LGI 431 (635)
-.-+.+.++ +.+++.++|++|.
T Consensus 204 ~a~g~~~~l~~~~~~~~i~vig~ 226 (302)
T 2qh8_A 204 TVASAIEGMIVAANQAKTPVFGA 226 (302)
T ss_dssp HHHTTHHHHHHHHHHTTCCEEES
T ss_pred hHHHHHHHHHHHHHHcCCCEEEC
Confidence 222334444 3455578999885
No 352
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=32.98 E-value=28 Score=34.59 Aligned_cols=30 Identities=10% Similarity=0.353 Sum_probs=23.4
Q ss_pred CeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEe
Q 006689 36 LQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLF 71 (635)
Q Consensus 36 ~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~ 71 (635)
||-|+|||| -++|| .|.+.|.. +|++|..+
T Consensus 1 M~~vlVTGa-tG~iG~~l~~~L~~-----~g~~V~~~ 31 (347)
T 1orr_A 1 MAKLLITGG-CGFLGSNLASFALS-----QGIDLIVF 31 (347)
T ss_dssp -CEEEEETT-TSHHHHHHHHHHHH-----TTCEEEEE
T ss_pred CcEEEEeCC-CchhHHHHHHHHHh-----CCCEEEEE
Confidence 456999997 37788 88888888 89988875
No 353
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=32.96 E-value=21 Score=30.66 Aligned_cols=33 Identities=3% Similarity=-0.174 Sum_probs=26.0
Q ss_pred CeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEeccCC
Q 006689 36 LQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGLDP 75 (635)
Q Consensus 36 ~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~Dp 75 (635)
+|-|+|+|+ ..+| .+...|.. .|++|..+-.||
T Consensus 6 ~~~v~I~G~--G~iG~~~a~~l~~-----~g~~v~~~d~~~ 39 (144)
T 2hmt_A 6 NKQFAVIGL--GRFGGSIVKELHR-----MGHEVLAVDINE 39 (144)
T ss_dssp CCSEEEECC--SHHHHHHHHHHHH-----TTCCCEEEESCH
T ss_pred CCcEEEECC--CHHHHHHHHHHHH-----CCCEEEEEeCCH
Confidence 456889996 8889 88999999 898888765443
No 354
>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}
Probab=32.45 E-value=30 Score=38.75 Aligned_cols=34 Identities=6% Similarity=0.057 Sum_probs=28.7
Q ss_pred CCCCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEec
Q 006689 33 PLNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFG 72 (635)
Q Consensus 33 ~~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K 72 (635)
.+.-|.++||||- |||| ++.+.|-. +|.+|.+.-
T Consensus 16 ~l~gk~~lVTGas-~GIG~aiA~~La~-----~Ga~Vv~~~ 50 (613)
T 3oml_A 16 RYDGRVAVVTGAG-AGLGREYALLFAE-----RGAKVVVND 50 (613)
T ss_dssp CCTTCEEEETTTT-SHHHHHHHHHHHH-----TTCEEEEC-
T ss_pred CCCCCEEEEeCCC-cHHHHHHHHHHHH-----CCCEEEEEe
Confidence 4456899999996 9999 99999999 999998753
No 355
>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A*
Probab=32.34 E-value=2.4e+02 Score=26.41 Aligned_cols=32 Identities=13% Similarity=0.293 Sum_probs=20.8
Q ss_pred cCCCEEEECCCCCCCcchhHHHHHHHHHHcCCCEEEE
Q 006689 395 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 431 (635)
Q Consensus 395 ~~~DGIllPGGfG~rg~eg~i~air~are~~iP~LGI 431 (635)
.++|||++.+.... . . ..++.+.+.++|+.-+
T Consensus 57 ~~vdgiIi~~~~~~-~-~---~~~~~~~~~~iPvV~~ 88 (272)
T 3o74_A 57 RRCDALFVASCLPP-E-D---DSYRELQDKGLPVIAI 88 (272)
T ss_dssp TTCSEEEECCCCCS-S-C---CHHHHHHHTTCCEEEE
T ss_pred cCCCEEEEecCccc-c-H---HHHHHHHHcCCCEEEE
Confidence 58999999875322 1 1 2345666789998644
No 356
>3cs3_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative; 2.40A {Enterococcus faecalis}
Probab=32.26 E-value=1.3e+02 Score=28.78 Aligned_cols=30 Identities=10% Similarity=-0.066 Sum_probs=19.9
Q ss_pred CCCEEEECCCCCCCcchhHHHHHHHHHHcCCCEEEE
Q 006689 396 GADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 431 (635)
Q Consensus 396 ~~DGIllPGGfG~rg~eg~i~air~are~~iP~LGI 431 (635)
++||||+.+...+ + ..++.+.+.++|+.-+
T Consensus 57 ~vdgiI~~~~~~~---~---~~~~~l~~~~iPvV~~ 86 (277)
T 3cs3_A 57 MVDGAIILDWTFP---T---KEIEKFAERGHSIVVL 86 (277)
T ss_dssp TCSEEEEECTTSC---H---HHHHHHHHTTCEEEES
T ss_pred cccEEEEecCCCC---H---HHHHHHHhcCCCEEEE
Confidence 8999999774221 1 3455666778998654
No 357
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=32.18 E-value=32 Score=33.84 Aligned_cols=35 Identities=6% Similarity=0.006 Sum_probs=26.6
Q ss_pred CCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEeccCC
Q 006689 35 NLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGLDP 75 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~Dp 75 (635)
++|-|+||||- ++|| .|.+.|.. +|++|..+-.+|
T Consensus 11 ~~~~vlVTGat-G~iG~~l~~~L~~-----~G~~V~~~~r~~ 46 (321)
T 2pk3_A 11 GSMRALITGVA-GFVGKYLANHLTE-----QNVEVFGTSRNN 46 (321)
T ss_dssp --CEEEEETTT-SHHHHHHHHHHHH-----TTCEEEEEESCT
T ss_pred CcceEEEECCC-ChHHHHHHHHHHH-----CCCEEEEEecCC
Confidence 36779999984 7888 88888888 899998865443
No 358
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=32.04 E-value=42 Score=33.46 Aligned_cols=32 Identities=3% Similarity=-0.154 Sum_probs=27.4
Q ss_pred CCeEEEEccccc-cchh-hHHHHHHhcCcCCCCceeEEe
Q 006689 35 NLQYMFLCLNEC-ACIN-FFSLFLVQNCQYHPNTHFNLF 71 (635)
Q Consensus 35 ~~k~i~vtggv~-s~lg-s~g~ll~~~~~~~~g~~v~~~ 71 (635)
+.|-++||||-= +||| .+.+.|-. +|++|...
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~-----~G~~V~~~ 62 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCA-----QGAEVALT 62 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHH-----TTCEEEEE
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHH-----CCCEEEEE
Confidence 358999999964 5999 99999999 99998875
No 359
>2fn9_A Ribose ABC transporter, periplasmic ribose-bindin; RBP, ribose binding protein, periplasmic binding protein, thermophilic proteins; 1.40A {Thermotoga maritima} PDB: 2fn8_A*
Probab=32.02 E-value=2e+02 Score=27.42 Aligned_cols=33 Identities=30% Similarity=0.424 Sum_probs=21.8
Q ss_pred cCCCEEEECCCCCCCcchhHHHHHHHHHHcCCCEEEE
Q 006689 395 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 431 (635)
Q Consensus 395 ~~~DGIllPGGfG~rg~eg~i~air~are~~iP~LGI 431 (635)
.++|||++.+...+ . ....++.+++.++|+.-+
T Consensus 57 ~~vdgiI~~~~~~~-~---~~~~~~~~~~~~iPvV~~ 89 (290)
T 2fn9_A 57 AGYDAIIFNPTDAD-G---SIANVKRAKEAGIPVFCV 89 (290)
T ss_dssp TTCSEEEECCSCTT-T---THHHHHHHHHTTCCEEEE
T ss_pred cCCCEEEEecCChH-H---HHHHHHHHHHCCCeEEEE
Confidence 58999999864221 1 123566677789998755
No 360
>4eyg_A Twin-arginine translocation pathway signal; PSI-biology, MCSG, midwest center for structural genomics, transporter; HET: VNL; 1.86A {Rhodopseudomonas palustris} PDB: 4ey3_A* 3t0n_A* 4eyk_A*
Probab=31.90 E-value=2.2e+02 Score=28.12 Aligned_cols=92 Identities=16% Similarity=0.111 Sum_probs=51.0
Q ss_pred CCccEEEEEeccCCCc-----chHHHHHHHHHHccc-cceeeeEEEEecCCCCCccccCCChhhhhHHHHhc---cCCCE
Q 006689 329 HEPVRIAMVGKYTGLS-----DAYLSILKALLHASV-DLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL---KGADG 399 (635)
Q Consensus 329 ~~~v~IalVGkY~~l~-----DaY~SI~~AL~~ag~-~~~vkl~i~wi~s~~le~~~~~~~p~~y~~a~~~L---~~~DG 399 (635)
.++++|+++...+... +....+..+++..+. -.+.++++.+.++.. +|+.-.++.+.| .++|+
T Consensus 4 ~~~i~IG~~~p~sg~~~~~g~~~~~g~~~a~~~~~~~i~G~~i~l~~~D~~~--------~~~~~~~~~~~li~~~~v~~ 75 (368)
T 4eyg_A 4 EDTFKVGLIVPMTGGQASTGKQIDNAIKLYIKKHGDTVAGKKIEVILKDDAA--------IPDNTKRLAQELIVNDKVNV 75 (368)
T ss_dssp CCEEEEEEEECSSSTTHHHHHHHHHHHHHHHHHHCSEETTEEEEEEEEECTT--------CHHHHHHHHHHHHHTSCCSE
T ss_pred CCcEEEEEEeCCcCcchhccHHHHHHHHHHHHHcCCCCCCeEEEEEEeCCCC--------CHHHHHHHHHHHHhcCCcEE
Confidence 4578999997653221 122334445555554 234566777776542 233322222333 57999
Q ss_pred EEECCCCCCCcchhHHHHHHHHHHcCCCEEEEeh
Q 006689 400 ILVPGGFGNRGVQGKILAAKYAREHRIPYLGICL 433 (635)
Q Consensus 400 IllPGGfG~rg~eg~i~air~are~~iP~LGICL 433 (635)
|+-|-+ ......++..+.+.++|++..+.
T Consensus 76 iiG~~~-----s~~~~~~~~~~~~~~ip~i~~~~ 104 (368)
T 4eyg_A 76 IAGFGI-----TPAALAAAPLATQAKVPEIVMAA 104 (368)
T ss_dssp EEECSS-----HHHHHHHHHHHHHHTCCEEESSC
T ss_pred EECCCc-----cHHHHHHHHHHHhCCceEEeccC
Confidence 884432 12234455667778999998754
No 361
>1wcv_1 SOJ, segregation protein; ATPase, bacterial, chromosome segregation; 1.6A {Thermus thermophilus} PDB: 2bej_A* 2bek_A*
Probab=31.84 E-value=38 Score=32.78 Aligned_cols=39 Identities=18% Similarity=0.227 Sum_probs=31.7
Q ss_pred CCCeEEEEccccccchh------hHHHHHHhcCcCCCCceeEEeccCCccc
Q 006689 34 LNLQYMFLCLNECACIN------FFSLFLVQNCQYHPNTHFNLFGLDPYLN 78 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg------s~g~ll~~~~~~~~g~~v~~~K~DpYlN 78 (635)
.++|.|.|+++ -.|.| .|+..|.. +|++|-.|.+||.-|
T Consensus 4 ~~~~vI~v~s~-kGGvGKTt~a~~LA~~la~-----~g~~VlliD~D~~~~ 48 (257)
T 1wcv_1 4 AKVRRIALANQ-KGGVGKTTTAINLAAYLAR-----LGKRVLLVDLDPQGN 48 (257)
T ss_dssp -CCCEEEECCS-SCCHHHHHHHHHHHHHHHH-----TTCCEEEEECCTTCH
T ss_pred CCCEEEEEEeC-CCCchHHHHHHHHHHHHHH-----CCCCEEEEECCCCcC
Confidence 35788988864 46778 88889988 999999999999644
No 362
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=31.65 E-value=41 Score=33.49 Aligned_cols=32 Identities=3% Similarity=-0.155 Sum_probs=27.0
Q ss_pred CCeEEEEccccc-cchh-hHHHHHHhcCcCCCCceeEEe
Q 006689 35 NLQYMFLCLNEC-ACIN-FFSLFLVQNCQYHPNTHFNLF 71 (635)
Q Consensus 35 ~~k~i~vtggv~-s~lg-s~g~ll~~~~~~~~g~~v~~~ 71 (635)
+-|.++||||-= +||| .+.+.|-. +|++|...
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~-----~G~~V~~~ 63 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAARE-----AGAELAFT 63 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHH-----TTCEEEEE
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHH-----CCCEEEEE
Confidence 458999999964 6799 99999999 89988764
No 363
>3zq6_A Putative arsenical pump-driving ATPase; tail-anchored, membrane protein; HET: ADP; 2.11A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=31.65 E-value=34 Score=34.86 Aligned_cols=35 Identities=9% Similarity=0.104 Sum_probs=29.5
Q ss_pred CeEEEEccccccchh------hHHHHHHhcCcCCCCceeEEeccCCc
Q 006689 36 LQYMFLCLNECACIN------FFSLFLVQNCQYHPNTHFNLFGLDPY 76 (635)
Q Consensus 36 ~k~i~vtggv~s~lg------s~g~ll~~~~~~~~g~~v~~~K~DpY 76 (635)
||-|+||+| -.|.| +++..|.. +|.||-.+-.||-
T Consensus 13 m~~i~v~sg-KGGvGKTTvA~~LA~~lA~-----~G~rVLlvD~D~~ 53 (324)
T 3zq6_A 13 KTTFVFIGG-KGGVGKTTISAATALWMAR-----SGKKTLVISTDPA 53 (324)
T ss_dssp BCEEEEEEE-STTSSHHHHHHHHHHHHHH-----TTCCEEEEECCSS
T ss_pred CeEEEEEeC-CCCchHHHHHHHHHHHHHH-----CCCcEEEEeCCCC
Confidence 577777776 67888 88888888 9999999999984
No 364
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=31.44 E-value=39 Score=34.24 Aligned_cols=31 Identities=6% Similarity=0.013 Sum_probs=26.6
Q ss_pred CeEEEEccccccchh------hHHHHHHhcCcCCCCceeEEeccC
Q 006689 36 LQYMFLCLNECACIN------FFSLFLVQNCQYHPNTHFNLFGLD 74 (635)
Q Consensus 36 ~k~i~vtggv~s~lg------s~g~ll~~~~~~~~g~~v~~~K~D 74 (635)
||..|++.| +.| .|++.|.+ ||+.|+.+=-.
T Consensus 23 MRIL~~~~p---~~GHv~P~l~LA~~L~~-----rGh~Vt~~t~~ 59 (400)
T 4amg_A 23 MRALFITSP---GLSHILPTVPLAQALRA-----LGHEVRYATGG 59 (400)
T ss_dssp CEEEEECCS---SHHHHGGGHHHHHHHHH-----TTCEEEEEECS
T ss_pred CeEEEECCC---chhHHHHHHHHHHHHHH-----CCCEEEEEeCc
Confidence 899999988 456 99999999 99999997543
No 365
>3bch_A 40S ribosomal protein SA; laminin receptor, P40 ribosomal protein, acetylation, cytoplasm, phosphorylation, polymorphism; 2.15A {Homo sapiens}
Probab=31.26 E-value=1.9e+02 Score=29.22 Aligned_cols=79 Identities=10% Similarity=0.229 Sum_probs=48.4
Q ss_pred CccEEEEEeccCCCcchHHHHHHHHHHccccceeeeEEEEecCCCCCccccCCChhhhhHHHHhccCCCEEEECCCCCCC
Q 006689 330 EPVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNR 409 (635)
Q Consensus 330 ~~v~IalVGkY~~l~DaY~SI~~AL~~ag~~~~vkl~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIllPGGfG~r 409 (635)
++-+|.+|| + -..+-..|.++-+.+|+.. +.=.|+.-. |+.... ..+..+|.|+|..-
T Consensus 103 ~~~~iLfVg--T-k~~aq~~V~~~A~~~g~~y---v~~RWlgG~-LTN~~~-----------~~f~~PdlliV~Dp---- 160 (253)
T 3bch_A 103 NPADVSVIS--S-RNTGQRAVLKFAAATGATP---IAGRFTPGT-FTNQIQ-----------AAFREPRLLVVTDP---- 160 (253)
T ss_dssp SGGGEEEEE--C-SHHHHHHHHHHHHHHCCEE---EESCCCTTT-TTCCSC-----------STTCSCSEEEESCT----
T ss_pred CCCeEEEEe--C-CHHHHHHHHHHHHHhCCee---ecceecCCc-ccCccc-----------cccCCCCEEEEECC----
Confidence 345688887 1 1123345666666666543 234687532 322111 13467999999862
Q ss_pred cchhHHHHHHHHHHcCCCEEEEe
Q 006689 410 GVQGKILAAKYAREHRIPYLGIC 432 (635)
Q Consensus 410 g~eg~i~air~are~~iP~LGIC 432 (635)
. ....++++|..-+||+.|||
T Consensus 161 ~--~e~~AI~EA~~lgIPvIalv 181 (253)
T 3bch_A 161 R--ADHQPLTEASYVNLPTIALC 181 (253)
T ss_dssp T--TTHHHHHHHHHTTCCEEEEE
T ss_pred C--ccchHHHHHHHhCCCEEEEE
Confidence 1 12568999999999999998
No 366
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=31.17 E-value=36 Score=33.38 Aligned_cols=30 Identities=10% Similarity=-0.040 Sum_probs=24.3
Q ss_pred EEEccccccchh-hHHHHHHhcCcCCCCceeEEeccC
Q 006689 39 MFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGLD 74 (635)
Q Consensus 39 i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~D 74 (635)
|+||||- +.|| .|...|.. +|++|..+-.+
T Consensus 3 vlVtGat-G~iG~~l~~~L~~-----~g~~V~~~~r~ 33 (312)
T 3ko8_A 3 IVVTGGA-GFIGSHLVDKLVE-----LGYEVVVVDNL 33 (312)
T ss_dssp EEEETTT-SHHHHHHHHHHHH-----TTCEEEEECCC
T ss_pred EEEECCC-ChHHHHHHHHHHh-----CCCEEEEEeCC
Confidence 8999984 7788 88888888 89999887443
No 367
>3lkv_A Uncharacterized conserved domain protein; ATPase binding cassette, PSI, MCSG, structural genomics, Pro structure initiative; HET: PHE; 2.20A {Vibrio cholerae}
Probab=30.86 E-value=78 Score=31.46 Aligned_cols=67 Identities=15% Similarity=0.168 Sum_probs=43.1
Q ss_pred CCccEEEEEeccCCCc---chHHHHHHHHHHccccceeeeEEEEecCCCCCccccCCChhhhhHHHHhc--cCCCEEEEC
Q 006689 329 HEPVRIAMVGKYTGLS---DAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVP 403 (635)
Q Consensus 329 ~~~v~IalVGkY~~l~---DaY~SI~~AL~~ag~~~~vkl~i~wi~s~~le~~~~~~~p~~y~~a~~~L--~~~DGIllP 403 (635)
.+.+||||+ .+.++. +++..+.++|+..|+.-+..+++.+.++.. |+..-....+.+ .++|.|+..
T Consensus 6 ~~~~~igi~-q~~~hp~ld~~~~G~~~~L~~~G~~~g~nv~~~~~~a~g--------d~~~~~~~~~~l~~~~~DlIiai 76 (302)
T 3lkv_A 6 AKTAKVAVS-QIVEHPALDATRQGLLDGLKAKGYEEGKNLEFDYKTAQG--------NPAIAVQIARQFVGENPDVLVGI 76 (302)
T ss_dssp -CCEEEEEE-ESCCCHHHHHHHHHHHHHHHHTTCCBTTTEEEEEEECTT--------CHHHHHHHHHHHHTTCCSEEEEE
T ss_pred cCCceEEEE-EeecChhHHHHHHHHHHHHHhhCcccCCcEEEEEEeCCC--------CHHHHHHHHHHHHhcCCcEEEEc
Confidence 357899999 687653 345678889999998776666666666542 333333333333 579988754
Q ss_pred C
Q 006689 404 G 404 (635)
Q Consensus 404 G 404 (635)
+
T Consensus 77 ~ 77 (302)
T 3lkv_A 77 A 77 (302)
T ss_dssp S
T ss_pred C
Confidence 3
No 368
>2h3h_A Sugar ABC transporter, periplasmic sugar-binding protein; glucose binding protein, periplasmic binding protein, GBP; HET: BGC; 1.70A {Thermotoga maritima} PDB: 2qvc_A* 3c6q_B*
Probab=30.79 E-value=1.6e+02 Score=28.60 Aligned_cols=34 Identities=26% Similarity=0.294 Sum_probs=22.6
Q ss_pred cCCCEEEECCCCCCCcchhHHHHHHHHHHcCCCEEEEe
Q 006689 395 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGIC 432 (635)
Q Consensus 395 ~~~DGIllPGGfG~rg~eg~i~air~are~~iP~LGIC 432 (635)
.++|||++.+...+ . ....++.+.+.++|+.-+.
T Consensus 56 ~~vdgiIi~~~~~~-~---~~~~~~~~~~~~iPvV~~~ 89 (313)
T 2h3h_A 56 EGVNGIAIAPSDPT-A---VIPTIKKALEMGIPVVTLD 89 (313)
T ss_dssp TTCSEEEECCSSTT-T---THHHHHHHHHTTCCEEEES
T ss_pred cCCCEEEEeCCChH-H---HHHHHHHHHHCCCeEEEeC
Confidence 58999999764221 1 2345666777899987663
No 369
>1jx6_A LUXP protein; protein-ligand complex, signaling protein; HET: AI2; 1.50A {Vibrio harveyi} SCOP: c.93.1.1 PDB: 1zhh_A* 2hj9_A*
Probab=30.49 E-value=2.3e+02 Score=27.89 Aligned_cols=91 Identities=7% Similarity=-0.007 Sum_probs=42.4
Q ss_pred CCccEEEEEeccCCCcch-HHHHHHHHHHccccceeeeEEEEecCCCCCccccCCChhhhhHHHHhc--cCCCEEEECCC
Q 006689 329 HEPVRIAMVGKYTGLSDA-YLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGG 405 (635)
Q Consensus 329 ~~~v~IalVGkY~~l~Da-Y~SI~~AL~~ag~~~~vkl~i~wi~s~~le~~~~~~~p~~y~~a~~~L--~~~DGIllPGG 405 (635)
.+..+|+++=.. ...+. |..+++.++.+..+.+..+.+.+.++.. + .+++.-.+..+.+ .++||||+++.
T Consensus 41 ~~~~~Igvi~~~-~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~-~-----~~~~~~~~~i~~l~~~~vdgiIi~~~ 113 (342)
T 1jx6_A 41 QRPIKISVVYPG-QQVSDYWVRNIASFEKRLYKLNINYQLNQVFTRP-N-----ADIKQQSLSLMEALKSKSDYLIFTLD 113 (342)
T ss_dssp SSCEEEEEEECC-CSSCCHHHHHHHHHHHHHHHTTCCEEEEEEECCT-T-----CCHHHHHHHHHHHHHTTCSEEEECCS
T ss_pred CCceEEEEEecC-CcccHHHHHHHHHHHHHHHHcCCeEEEEecCCCC-c-----cCHHHHHHHHHHHHhcCCCEEEEeCC
Confidence 345689988322 02333 4445555554433333333333333320 0 0111111122222 57999999542
Q ss_pred CCCCcchhHHHHHHHHHHcCCCEEEE
Q 006689 406 FGNRGVQGKILAAKYAREHRIPYLGI 431 (635)
Q Consensus 406 fG~rg~eg~i~air~are~~iP~LGI 431 (635)
. . .. ...++.+.+.++|+.-+
T Consensus 114 ~-~-~~---~~~~~~~~~~~ip~V~~ 134 (342)
T 1jx6_A 114 T-T-RH---RKFVEHVLDSTNTKLIL 134 (342)
T ss_dssp S-S-TT---HHHHHHHHHHCSCEEEE
T ss_pred h-H-hH---HHHHHHHHHcCCCEEEE
Confidence 1 1 11 23455666778997654
No 370
>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2
Probab=30.40 E-value=34 Score=34.43 Aligned_cols=32 Identities=6% Similarity=0.031 Sum_probs=25.3
Q ss_pred CeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEecc
Q 006689 36 LQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGL 73 (635)
Q Consensus 36 ~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~ 73 (635)
||-|+||||- ++|| .+.+.|.. +|++|..+-.
T Consensus 1 m~~vlVtGat-G~iG~~l~~~L~~-----~g~~V~~~~r 33 (372)
T 1db3_A 1 SKVALITGVT-GQDGSYLAEFLLE-----KGYEVHGIKR 33 (372)
T ss_dssp CCEEEEETTT-SHHHHHHHHHHHH-----TTCEEEEECC
T ss_pred CCEEEEECCC-ChHHHHHHHHHHH-----CCCEEEEEEC
Confidence 4679999984 7888 88888888 8998887643
No 371
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=30.11 E-value=41 Score=33.36 Aligned_cols=32 Identities=3% Similarity=-0.106 Sum_probs=25.0
Q ss_pred EEEEccccccchh-hHHHHHHhcCcCCCCceeEEeccCC
Q 006689 38 YMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGLDP 75 (635)
Q Consensus 38 ~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~Dp 75 (635)
-|+||||- +.|| .+.+.|.. +|++|..+-.+|
T Consensus 15 ~ilVtGat-G~iG~~l~~~L~~-----~g~~V~~~~r~~ 47 (342)
T 2x4g_A 15 KYAVLGAT-GLLGHHAARAIRA-----AGHDLVLIHRPS 47 (342)
T ss_dssp EEEEESTT-SHHHHHHHHHHHH-----TTCEEEEEECTT
T ss_pred EEEEECCC-cHHHHHHHHHHHH-----CCCEEEEEecCh
Confidence 49999974 7788 88888888 899998865443
No 372
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=29.99 E-value=46 Score=33.16 Aligned_cols=32 Identities=6% Similarity=-0.033 Sum_probs=27.8
Q ss_pred CCCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEe
Q 006689 34 LNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLF 71 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~ 71 (635)
.+-|-++||||- |||| ++.+.|-. .|.+|.+.
T Consensus 7 L~GKvalVTGas-~GIG~aiA~~la~-----~Ga~Vvi~ 39 (247)
T 4hp8_A 7 LEGRKALVTGAN-TGLGQAIAVGLAA-----AGAEVVCA 39 (247)
T ss_dssp CTTCEEEETTTT-SHHHHHHHHHHHH-----TTCEEEEE
T ss_pred CCCCEEEEeCcC-CHHHHHHHHHHHH-----cCCEEEEE
Confidence 446889999985 8999 99999999 99999874
No 373
>2vk2_A YTFQ, ABC transporter periplasmic-binding protein YTFQ; transport protein, galactofuranose; HET: GZL; 1.20A {Escherichia coli}
Probab=29.99 E-value=1.7e+02 Score=28.37 Aligned_cols=33 Identities=24% Similarity=0.362 Sum_probs=21.2
Q ss_pred cCCCEEEECCCCCCCcchhHHHHHHHHHHcCCCEEEE
Q 006689 395 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 431 (635)
Q Consensus 395 ~~~DGIllPGGfG~rg~eg~i~air~are~~iP~LGI 431 (635)
.++||||+.+.... .. ...++.+.+.++|+.-+
T Consensus 57 ~~vdgiIi~~~~~~-~~---~~~~~~~~~~~iPvV~~ 89 (306)
T 2vk2_A 57 QGVDAIFIAPVVAT-GW---EPVLKEAKDAEIPVFLL 89 (306)
T ss_dssp HTCSEEEECCSSSS-SC---HHHHHHHHHTTCCEEEE
T ss_pred cCCCEEEEeCCChh-hH---HHHHHHHHHCCCCEEEe
Confidence 58999999874322 12 23455666778998654
No 374
>3kjx_A Transcriptional regulator, LACI family; LACL family, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.33A {Silicibacter pomeroyi}
Probab=29.86 E-value=2.4e+02 Score=27.87 Aligned_cols=84 Identities=15% Similarity=0.169 Sum_probs=44.8
Q ss_pred CccEEEEEeccCCCcch-HHHHHHHHHHccccceeeeEEEEecCCCCCccccCCChhhhhHHHHhc--cCCCEEEECCCC
Q 006689 330 EPVRIAMVGKYTGLSDA-YLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGGF 406 (635)
Q Consensus 330 ~~v~IalVGkY~~l~Da-Y~SI~~AL~~ag~~~~vkl~i~wi~s~~le~~~~~~~p~~y~~a~~~L--~~~DGIllPGGf 406 (635)
+..+|+++=. ...+. |..+++.++.+..+.+..+.+...+ . +++.-.+..+.+ .++||||+.+..
T Consensus 67 ~~~~Ig~i~~--~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~--~--------~~~~~~~~i~~l~~~~vdGiIi~~~~ 134 (344)
T 3kjx_A 67 RVNLVAVIIP--SLSNMVFPEVLTGINQVLEDTELQPVVGVTD--Y--------LPEKEEKVLYEMLSWRPSGVIIAGLE 134 (344)
T ss_dssp CCSEEEEEES--CSSSSSHHHHHHHHHHHHTSSSSEEEEEECT--T--------CHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred CCCEEEEEeC--CCCcHHHHHHHHHHHHHHHHCCCEEEEEeCC--C--------CHHHHHHHHHHHHhCCCCEEEEECCC
Confidence 3457998832 23333 4556666666655555443333221 1 111111222222 479999998632
Q ss_pred CCCcchhHHHHHHHHHHcCCCEEEE
Q 006689 407 GNRGVQGKILAAKYAREHRIPYLGI 431 (635)
Q Consensus 407 G~rg~eg~i~air~are~~iP~LGI 431 (635)
.+ . ..++.+.+.++|+.-+
T Consensus 135 ~~---~---~~~~~l~~~~iPvV~i 153 (344)
T 3kjx_A 135 HS---E---AARAMLDAAGIPVVEI 153 (344)
T ss_dssp CC---H---HHHHHHHHCSSCEEEE
T ss_pred CC---H---HHHHHHHhCCCCEEEE
Confidence 21 1 3556677789998765
No 375
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=29.83 E-value=29 Score=32.88 Aligned_cols=25 Identities=8% Similarity=0.057 Sum_probs=20.8
Q ss_pred CeEEEEccccccchh-hHHHHHHhcCcCCCCc
Q 006689 36 LQYMFLCLNECACIN-FFSLFLVQNCQYHPNT 66 (635)
Q Consensus 36 ~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~ 66 (635)
.|.|+|||| -++|| .+.+.|-. +|+
T Consensus 2 ~k~vlITGa-sggiG~~la~~l~~-----~G~ 27 (244)
T 2bd0_A 2 KHILLITGA-GKGIGRAIALEFAR-----AAR 27 (244)
T ss_dssp CEEEEEETT-TSHHHHHHHHHHHH-----HTT
T ss_pred CCEEEEECC-CChHHHHHHHHHHH-----hcC
Confidence 478999998 48999 88888877 787
No 376
>2afh_E Nitrogenase iron protein 1; nitrogen fixation, iron-sulfur, metal-binding, molybdenum, oxidoreductase; HET: HCA CFN CLF PGE PG4 P6G 1PE; 2.10A {Azotobacter vinelandii} SCOP: c.37.1.10 PDB: 1g1m_A 1g5p_A 1m1y_E* 1m34_E* 1n2c_E* 1nip_A* 1fp6_A* 2afi_E* 2afk_E* 2nip_A 1de0_A 1xcp_A* 1xdb_A 1xd8_A 1xd9_A* 1g20_E* 1g21_E* 2c8v_A* 1rw4_A
Probab=29.74 E-value=39 Score=33.26 Aligned_cols=36 Identities=14% Similarity=0.170 Sum_probs=31.0
Q ss_pred CeEEEEccccccchh------hHHHHHHhcCcCCCCceeEEeccCCccc
Q 006689 36 LQYMFLCLNECACIN------FFSLFLVQNCQYHPNTHFNLFGLDPYLN 78 (635)
Q Consensus 36 ~k~i~vtggv~s~lg------s~g~ll~~~~~~~~g~~v~~~K~DpYlN 78 (635)
||.|.|+ | =.|.| .|+..|.. +|++|-.|-.||.-|
T Consensus 2 MkvIavs-~-KGGvGKTT~a~nLA~~La~-----~G~rVlliD~D~q~~ 43 (289)
T 2afh_E 2 MRQCAIY-G-KGGIGKSTTTQNLVAALAE-----MGKKVMIVGCDPKAD 43 (289)
T ss_dssp CEEEEEE-E-CTTSSHHHHHHHHHHHHHH-----TTCCEEEEEECSSSC
T ss_pred ceEEEEe-C-CCcCcHHHHHHHHHHHHHH-----CCCeEEEEecCCCCC
Confidence 6888886 5 78889 88889998 999999999999754
No 377
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=29.67 E-value=29 Score=32.75 Aligned_cols=35 Identities=9% Similarity=0.086 Sum_probs=27.2
Q ss_pred CCeEEEEccccccchh-hHHHHHHhcCcCCCCc--eeEEeccCC
Q 006689 35 NLQYMFLCLNECACIN-FFSLFLVQNCQYHPNT--HFNLFGLDP 75 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~--~v~~~K~Dp 75 (635)
+.|-|+|||| -++|| .+.+.|-. +|+ +|..+-.+|
T Consensus 17 ~~~~vlVtGa-sg~iG~~l~~~L~~-----~G~~~~V~~~~r~~ 54 (242)
T 2bka_A 17 QNKSVFILGA-SGETGRVLLKEILE-----QGLFSKVTLIGRRK 54 (242)
T ss_dssp TCCEEEEECT-TSHHHHHHHHHHHH-----HTCCSEEEEEESSC
T ss_pred cCCeEEEECC-CcHHHHHHHHHHHc-----CCCCCEEEEEEcCC
Confidence 4467999998 48899 88888888 899 888865443
No 378
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=29.59 E-value=37 Score=34.44 Aligned_cols=33 Identities=6% Similarity=-0.011 Sum_probs=25.9
Q ss_pred CeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEeccC
Q 006689 36 LQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGLD 74 (635)
Q Consensus 36 ~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~D 74 (635)
+|-|+||||- ++|| .|...|.. +|++|..+-.+
T Consensus 24 ~~~vlVtGat-G~iG~~l~~~L~~-----~g~~V~~~~r~ 57 (375)
T 1t2a_A 24 RNVALITGIT-GQDGSYLAEFLLE-----KGYEVHGIVRR 57 (375)
T ss_dssp CCEEEEETTT-SHHHHHHHHHHHH-----TTCEEEEEECC
T ss_pred CcEEEEECCC-chHHHHHHHHHHH-----CCCEEEEEECC
Confidence 3779999984 7788 88888888 89988876443
No 379
>3clk_A Transcription regulator; 11017J, PSI-II, NYSGXRC, dimer, structural genomics, protein structure initiative; 2.08A {Lactobacillus plantarum WCFS1}
Probab=29.15 E-value=1e+02 Score=29.73 Aligned_cols=85 Identities=19% Similarity=0.155 Sum_probs=37.7
Q ss_pred CccEEEEEeccCCCcch-HHHHHHHHHHccccceeeeEEEEecCC-CCCccccCCChhhhhHHHHhc--cCCCEEEECCC
Q 006689 330 EPVRIAMVGKYTGLSDA-YLSILKALLHASVDLRKKLVIDWIPAC-DLEDATEKENPDAYKAAWKLL--KGADGILVPGG 405 (635)
Q Consensus 330 ~~v~IalVGkY~~l~Da-Y~SI~~AL~~ag~~~~vkl~i~wi~s~-~le~~~~~~~p~~y~~a~~~L--~~~DGIllPGG 405 (635)
++.+|+++-. ...+. |..+++.++.+..+.+..+.+.| ++. +.+.. .+..+.+ .++||||+.+.
T Consensus 7 ~~~~Ig~i~~--~~~~~~~~~~~~gi~~~a~~~g~~~~~~~-~~~~~~~~~---------~~~~~~l~~~~vdgiI~~~~ 74 (290)
T 3clk_A 7 SSNVIAAVVS--SVRTNFAQQILDGIQEEAHKNGYNLIIVY-SGSADPEEQ---------KHALLTAIERPVMGILLLSI 74 (290)
T ss_dssp -CCEEEEECC--CCSSSHHHHHHHHHHHHHHTTTCEEEEEC--------------------CHHHHHHSSCCSEEEEESC
T ss_pred cCCEEEEEeC--CCCChHHHHHHHHHHHHHHHcCCeEEEEe-CCCCCHHHH---------HHHHHHHHhcCCCEEEEecc
Confidence 3468999842 23334 44555555554444444433331 221 11110 0112222 58999998764
Q ss_pred CCCCcchhHHHHHHHHHHcCCCEEEEe
Q 006689 406 FGNRGVQGKILAAKYAREHRIPYLGIC 432 (635)
Q Consensus 406 fG~rg~eg~i~air~are~~iP~LGIC 432 (635)
..+. ..++.+.+.++|+.-+-
T Consensus 75 ~~~~------~~~~~l~~~~iPvV~~~ 95 (290)
T 3clk_A 75 ALTD------DNLQLLQSSDVPYCFLS 95 (290)
T ss_dssp C----------CHHHHHCC--CEEEES
T ss_pred cCCH------HHHHHHHhCCCCEEEEc
Confidence 3221 23455566789987653
No 380
>2j37_W Signal recognition particle 54 kDa protein (SRP54); ribosome, SRP, translation/RNA; 8.00A {Canis SP} PDB: 1wgw_A
Probab=29.03 E-value=3.4e+02 Score=29.67 Aligned_cols=37 Identities=5% Similarity=-0.026 Sum_probs=27.5
Q ss_pred CCCeEEEEccccccchh------hHHHHHHhcCcCCCCceeEEeccCCcc
Q 006689 34 LNLQYMFLCLNECACIN------FFSLFLVQNCQYHPNTHFNLFGLDPYL 77 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg------s~g~ll~~~~~~~~g~~v~~~K~DpYl 77 (635)
.+.+.|.++|- .|.| .|+..|+. +|.+|..+-.|||-
T Consensus 99 ~~~~vI~ivG~--~GvGKTTl~~kLA~~l~~-----~G~kVllVd~D~~r 141 (504)
T 2j37_W 99 GKQNVIMFVGL--QGSGKTTTCSKLAYYYQR-----KGWKTCLICADTFR 141 (504)
T ss_dssp S--EEEEEECS--TTSSHHHHHHHHHHHHHH-----TTCCEEEEEECCSS
T ss_pred CCCeEEEEECC--CCCCHHHHHHHHHHHHHh-----CCCeEEEEeccccc
Confidence 34677888854 6888 56666677 89999999999974
No 381
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=28.98 E-value=39 Score=30.03 Aligned_cols=33 Identities=15% Similarity=0.161 Sum_probs=26.3
Q ss_pred CeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEeccCC
Q 006689 36 LQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGLDP 75 (635)
Q Consensus 36 ~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~Dp 75 (635)
.+.|+|+|+ .-+| .+++.|.. .|++|+.+--||
T Consensus 3 ~~~vlI~G~--G~vG~~la~~L~~-----~g~~V~vid~~~ 36 (153)
T 1id1_A 3 KDHFIVCGH--SILAINTILQLNQ-----RGQNVTVISNLP 36 (153)
T ss_dssp CSCEEEECC--SHHHHHHHHHHHH-----TTCCEEEEECCC
T ss_pred CCcEEEECC--CHHHHHHHHHHHH-----CCCCEEEEECCC
Confidence 445667775 7778 89999999 999999987765
No 382
>3d8u_A PURR transcriptional regulator; APC91343.1, vibrio parahaem RIMD 2210633, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.88A {Vibrio parahaemolyticus}
Probab=28.30 E-value=1.4e+02 Score=28.11 Aligned_cols=32 Identities=19% Similarity=0.271 Sum_probs=21.2
Q ss_pred cCCCEEEECCCCCCCcchhHHHHHHHHHHcCCCEEEEe
Q 006689 395 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGIC 432 (635)
Q Consensus 395 ~~~DGIllPGGfG~rg~eg~i~air~are~~iP~LGIC 432 (635)
.++|||++.+...+ + ..++.+.+.++|+.-+.
T Consensus 58 ~~vdgii~~~~~~~---~---~~~~~l~~~~iPvV~~~ 89 (275)
T 3d8u_A 58 SRPAGVVLFGSEHS---Q---RTHQLLEASNTPVLEIA 89 (275)
T ss_dssp SCCCCEEEESSCCC---H---HHHHHHHHHTCCEEEES
T ss_pred cCCCEEEEeCCCCC---H---HHHHHHHhCCCCEEEEe
Confidence 57999999764221 1 34556667799987653
No 383
>3brq_A HTH-type transcriptional regulator ASCG; transcriptional repressor structure escherichia coli, struct genomics, PSI-2; HET: FRU; 2.00A {Escherichia coli}
Probab=28.28 E-value=1.7e+02 Score=27.76 Aligned_cols=32 Identities=16% Similarity=0.132 Sum_probs=21.1
Q ss_pred cCCCEEEECCCCCCCcchhHHHHHHHHHH-cCCCEEEEe
Q 006689 395 KGADGILVPGGFGNRGVQGKILAAKYARE-HRIPYLGIC 432 (635)
Q Consensus 395 ~~~DGIllPGGfG~rg~eg~i~air~are-~~iP~LGIC 432 (635)
.++||||+.+...+ . ..++.+.+ .++|+.-+-
T Consensus 76 ~~vdgii~~~~~~~---~---~~~~~l~~~~~iPvV~~~ 108 (296)
T 3brq_A 76 LRCDAIMIYPRFLS---V---DEIDDIIDAHSQPIMVLN 108 (296)
T ss_dssp TTCSEEEEECSSSC---H---HHHHHHHHTCSSCEEEES
T ss_pred cCCCEEEEecCCCC---h---HHHHHHHhcCCCCEEEEc
Confidence 58999999764221 1 34556667 799987653
No 384
>1cp2_A CP2, nitrogenase iron protein; oxidoreductase; 1.93A {Clostridium pasteurianum} SCOP: c.37.1.10
Probab=28.22 E-value=40 Score=32.56 Aligned_cols=36 Identities=14% Similarity=0.135 Sum_probs=29.9
Q ss_pred CeEEEEccccccchh------hHHHHHHhcCcCCCCceeEEeccCCccc
Q 006689 36 LQYMFLCLNECACIN------FFSLFLVQNCQYHPNTHFNLFGLDPYLN 78 (635)
Q Consensus 36 ~k~i~vtggv~s~lg------s~g~ll~~~~~~~~g~~v~~~K~DpYlN 78 (635)
||-|.|+ | =.|.| .|+..|.. +|++|-.|-.||.-|
T Consensus 1 M~vI~vs-~-KGGvGKTT~a~nLA~~la~-----~G~~VlliD~D~q~~ 42 (269)
T 1cp2_A 1 MRQVAIY-G-KGGIGKSTTTQNLTSGLHA-----MGKTIMVVGCDPKAD 42 (269)
T ss_dssp CEEEEEE-E-CTTSSHHHHHHHHHHHHHT-----TTCCEEEEEECTTSC
T ss_pred CcEEEEe-c-CCCCcHHHHHHHHHHHHHH-----CCCcEEEEcCCCCCC
Confidence 5777775 5 78888 88888988 999999999999654
No 385
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=27.88 E-value=40 Score=31.35 Aligned_cols=34 Identities=6% Similarity=-0.026 Sum_probs=26.6
Q ss_pred CeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEeccCC
Q 006689 36 LQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGLDP 75 (635)
Q Consensus 36 ~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~Dp 75 (635)
||-|+||||- +.|| .+.+.|.. +|++|..+-.+|
T Consensus 4 m~~ilItGat-G~iG~~l~~~L~~-----~g~~V~~~~r~~ 38 (227)
T 3dhn_A 4 VKKIVLIGAS-GFVGSALLNEALN-----RGFEVTAVVRHP 38 (227)
T ss_dssp CCEEEEETCC-HHHHHHHHHHHHT-----TTCEEEEECSCG
T ss_pred CCEEEEEcCC-chHHHHHHHHHHH-----CCCEEEEEEcCc
Confidence 4669999874 7788 88888888 899998875553
No 386
>1t0b_A THUA-like protein; trehalose metabolism, NCS symmetry, structural genomics, PSI, protein structure initiative; 1.70A {Geobacillus stearothermophilus} SCOP: c.23.16.6
Probab=27.67 E-value=1.9e+02 Score=28.60 Aligned_cols=86 Identities=13% Similarity=0.079 Sum_probs=50.6
Q ss_pred ccEEEEEeccCCCcchH----H---------HHHHHHHHccccceeeeEEEEecCCCCCccccCCChhhhhHHHHhccCC
Q 006689 331 PVRIAMVGKYTGLSDAY----L---------SILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGA 397 (635)
Q Consensus 331 ~v~IalVGkY~~l~DaY----~---------SI~~AL~~ag~~~~vkl~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~ 397 (635)
.+||.+.++|. +++. . -+.++|+..|+++.+ +..++.+.. .+ .+.|+++
T Consensus 7 ~~~vlv~~~~~--h~~~~~~v~~~~p~g~~~~i~~~L~~~gf~V~~------~t~dd~~~~---~~-------~~~L~~~ 68 (252)
T 1t0b_A 7 PIRVVVWNEFR--HEKKDEQVRAIYPEGMHTVIASYLAEAGFDAAT------AVLDEPEHG---LT-------DEVLDRC 68 (252)
T ss_dssp CCEEEEEECCC--HHHHCHHHHHHCTTCHHHHHHHHHHHTTCEEEE------EESSSGGGG---CC-------HHHHHTC
T ss_pred CcEEEEECCcc--ccccchhhhccCchHHHHHHHHHHhhCCcEEEE------EeccCcccc---CC-------HhHHhcC
Confidence 47898888764 1221 1 226778877766554 221121100 01 1468999
Q ss_pred CEEEECC-CCCCCcchhHHHHHHHHHHcCCCEEEEehh
Q 006689 398 DGILVPG-GFGNRGVQGKILAAKYAREHRIPYLGICLG 434 (635)
Q Consensus 398 DGIllPG-GfG~rg~eg~i~air~are~~iP~LGICLG 434 (635)
|.||+-| ..+..-.+...++++...+++.+++||=-|
T Consensus 69 DvvV~~~~~~~~~l~~~~~~al~~~V~~GgG~vgiH~a 106 (252)
T 1t0b_A 69 DVLVWWGHIAHDEVKDEVVERVHRRVLEGMGLIVLHSG 106 (252)
T ss_dssp SEEEEECSSCGGGSCHHHHHHHHHHHHTTCEEEEEGGG
T ss_pred CEEEEecCCCCCcCCHHHHHHHHHHHHcCCCEEEEccc
Confidence 9999843 122222345677787777889999999544
No 387
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=27.65 E-value=49 Score=32.83 Aligned_cols=32 Identities=6% Similarity=-0.031 Sum_probs=25.3
Q ss_pred CeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEecc
Q 006689 36 LQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGL 73 (635)
Q Consensus 36 ~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~ 73 (635)
.|-|+||||- ++|| .|...|.. +|++|...-.
T Consensus 5 ~~~vlVTGat-G~iG~~l~~~L~~-----~G~~V~~~~r 37 (341)
T 3enk_A 5 KGTILVTGGA-GYIGSHTAVELLA-----HGYDVVIADN 37 (341)
T ss_dssp SCEEEEETTT-SHHHHHHHHHHHH-----TTCEEEEECC
T ss_pred CcEEEEecCC-cHHHHHHHHHHHH-----CCCcEEEEec
Confidence 4679999974 7888 88888888 8998887543
No 388
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=27.48 E-value=44 Score=33.11 Aligned_cols=33 Identities=3% Similarity=-0.033 Sum_probs=24.9
Q ss_pred CeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEeccC
Q 006689 36 LQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGLD 74 (635)
Q Consensus 36 ~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~D 74 (635)
++-|+||||- ++|| .|...|.. +|++|..+--+
T Consensus 14 ~~~vlVTGat-G~iG~~l~~~L~~-----~g~~V~~~~r~ 47 (335)
T 1rpn_A 14 TRSALVTGIT-GQDGAYLAKLLLE-----KGYRVHGLVAR 47 (335)
T ss_dssp -CEEEEETTT-SHHHHHHHHHHHH-----TTCEEEEEECC
T ss_pred CCeEEEECCC-ChHHHHHHHHHHH-----CCCeEEEEeCC
Confidence 4669999984 7788 78888888 89988875443
No 389
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=27.09 E-value=46 Score=33.23 Aligned_cols=34 Identities=9% Similarity=0.027 Sum_probs=25.9
Q ss_pred CCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEeccC
Q 006689 35 NLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGLD 74 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~D 74 (635)
++|-|+||||- ++|| .|.+.|.. +|++|..+-.+
T Consensus 20 ~~~~vlVTGat-G~iG~~l~~~L~~-----~g~~V~~~~r~ 54 (333)
T 2q1w_A 20 HMKKVFITGIC-GQIGSHIAELLLE-----RGDKVVGIDNF 54 (333)
T ss_dssp -CCEEEEETTT-SHHHHHHHHHHHH-----TTCEEEEEECC
T ss_pred CCCEEEEeCCc-cHHHHHHHHHHHH-----CCCEEEEEECC
Confidence 45679999974 7788 88888888 89999876443
No 390
>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A
Probab=26.93 E-value=45 Score=35.91 Aligned_cols=31 Identities=3% Similarity=-0.056 Sum_probs=27.4
Q ss_pred CCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEe
Q 006689 35 NLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLF 71 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~ 71 (635)
.-|.++||||- +||| .+.+.|-. +|.+|..+
T Consensus 212 ~gk~~LVTGgs-gGIG~aiA~~La~-----~Ga~Vvl~ 243 (454)
T 3u0b_A 212 DGKVAVVTGAA-RGIGATIAEVFAR-----DGATVVAI 243 (454)
T ss_dssp TTCEEEESSCS-SHHHHHHHHHHHH-----TTCEEEEE
T ss_pred CCCEEEEeCCc-hHHHHHHHHHHHH-----CCCEEEEE
Confidence 35899999995 9999 99999999 99999876
No 391
>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}
Probab=26.84 E-value=51 Score=36.90 Aligned_cols=31 Identities=6% Similarity=0.118 Sum_probs=26.9
Q ss_pred CCCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEE
Q 006689 34 LNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNL 70 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~ 70 (635)
+.-|.++||||- |||| .+.+.|-. +|.+|.+
T Consensus 320 l~gkvalVTGas-~GIG~a~A~~la~-----~Ga~Vv~ 351 (604)
T 2et6_A 320 LKDKVVLITGAG-AGLGKEYAKWFAK-----YGAKVVV 351 (604)
T ss_dssp CTTCEEEESSCS-SHHHHHHHHHHHH-----TTCEEEE
T ss_pred cCCCeEEEECcc-hHHHHHHHHHHHH-----CCCEEEE
Confidence 345899999985 8999 99999999 9999876
No 392
>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}
Probab=26.75 E-value=38 Score=32.37 Aligned_cols=30 Identities=3% Similarity=-0.122 Sum_probs=22.0
Q ss_pred CCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEe
Q 006689 35 NLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLF 71 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~ 71 (635)
+.|.++||||- +||| .+.+.| . +|++|..+
T Consensus 4 ~~k~vlITGas-~gIG~~~a~~l-~-----~g~~v~~~ 34 (245)
T 3e9n_A 4 KKKIAVVTGAT-GGMGIEIVKDL-S-----RDHIVYAL 34 (245)
T ss_dssp --CEEEEESTT-SHHHHHHHHHH-T-----TTSEEEEE
T ss_pred CCCEEEEEcCC-CHHHHHHHHHH-h-----CCCeEEEE
Confidence 45889999984 8999 888887 4 46777664
No 393
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=26.71 E-value=47 Score=32.97 Aligned_cols=34 Identities=15% Similarity=0.115 Sum_probs=25.4
Q ss_pred CeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEeccCC
Q 006689 36 LQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGLDP 75 (635)
Q Consensus 36 ~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~Dp 75 (635)
.|-|+|||| -+.|| .|.+.|.. +|++|...-.||
T Consensus 9 ~~~vlVTGa-tGfIG~~l~~~Ll~-----~G~~V~~~~r~~ 43 (338)
T 2rh8_A 9 KKTACVVGG-TGFVASLLVKLLLQ-----KGYAVNTTVRDP 43 (338)
T ss_dssp CCEEEEECT-TSHHHHHHHHHHHH-----TTCEEEEEESCT
T ss_pred CCEEEEECC-chHHHHHHHHHHHH-----CCCEEEEEEcCc
Confidence 466999996 46788 78887878 899998754443
No 394
>3e61_A Putative transcriptional repressor of ribose OPER; structural genomics, DNA-binding, transcripti regulation, PSI-2; 2.00A {Staphylococcus saprophyticus subsp}
Probab=26.58 E-value=1.5e+02 Score=28.08 Aligned_cols=29 Identities=17% Similarity=0.264 Sum_probs=19.6
Q ss_pred cCCCEEEECCCCCCCcchhHHHHHH-HHHHcCCCEEEE
Q 006689 395 KGADGILVPGGFGNRGVQGKILAAK-YAREHRIPYLGI 431 (635)
Q Consensus 395 ~~~DGIllPGGfG~rg~eg~i~air-~are~~iP~LGI 431 (635)
.++||||+.+ . . -..++ .+.+.++|+.-+
T Consensus 63 ~~~dgiIi~~--~---~---~~~~~~~l~~~~iPvV~~ 92 (277)
T 3e61_A 63 HNCTGMISTA--F---N---ENIIENTLTDHHIPFVFI 92 (277)
T ss_dssp TTCSEEEECG--G---G---HHHHHHHHHHC-CCEEEG
T ss_pred CCCCEEEEec--C---C---hHHHHHHHHcCCCCEEEE
Confidence 5899999987 1 1 23466 777889998654
No 395
>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}
Probab=26.55 E-value=26 Score=33.88 Aligned_cols=34 Identities=9% Similarity=0.017 Sum_probs=26.0
Q ss_pred CeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEeccCC
Q 006689 36 LQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGLDP 75 (635)
Q Consensus 36 ~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~Dp 75 (635)
||-|+||||- ++|| .|.+.|.. +|++|..+-.+|
T Consensus 2 ~~~ilVtGat-G~iG~~l~~~L~~-----~g~~V~~~~r~~ 36 (267)
T 3ay3_A 2 LNRLLVTGAA-GGVGSAIRPHLGT-----LAHEVRLSDIVD 36 (267)
T ss_dssp EEEEEEESTT-SHHHHHHGGGGGG-----TEEEEEECCSSC
T ss_pred CceEEEECCC-CHHHHHHHHHHHh-----CCCEEEEEeCCC
Confidence 6789999984 7778 77777777 899988865443
No 396
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=26.51 E-value=47 Score=32.45 Aligned_cols=34 Identities=9% Similarity=0.046 Sum_probs=26.1
Q ss_pred CCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEeccC
Q 006689 35 NLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGLD 74 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~D 74 (635)
++|-|+||||- +.|| .|...|.. +|++|..+--+
T Consensus 6 ~~~~vlVtGat-G~iG~~l~~~L~~-----~g~~V~~~~r~ 40 (321)
T 3vps_A 6 LKHRILITGGA-GFIGGHLARALVA-----SGEEVTVLDDL 40 (321)
T ss_dssp -CCEEEEETTT-SHHHHHHHHHHHH-----TTCCEEEECCC
T ss_pred CCCeEEEECCC-ChHHHHHHHHHHH-----CCCEEEEEecC
Confidence 36779999975 6688 88888888 89999887444
No 397
>3huu_A Transcription regulator like protein; PSI-II, NYSGXRC, LAC I, STR genomics, protein structure initiative; 1.95A {Staphylococcus haemolyticus}
Probab=26.49 E-value=1.5e+02 Score=28.65 Aligned_cols=31 Identities=23% Similarity=0.446 Sum_probs=21.3
Q ss_pred cCCCEEEECCCCCCCcchhHHHHHHHHHHcCCCEEEE
Q 006689 395 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 431 (635)
Q Consensus 395 ~~~DGIllPGGfG~rg~eg~i~air~are~~iP~LGI 431 (635)
.++||||+.+...+. ..++.+.+.++|+.-+
T Consensus 82 ~~vdgiIi~~~~~~~------~~~~~l~~~~iPvV~i 112 (305)
T 3huu_A 82 KSVDGFILLYSLKDD------PIEHLLNEFKVPYLIV 112 (305)
T ss_dssp TCCSEEEESSCBTTC------HHHHHHHHTTCCEEEE
T ss_pred CCCCEEEEeCCcCCc------HHHHHHHHcCCCEEEE
Confidence 589999998743221 3456667789998655
No 398
>3brs_A Periplasmic binding protein/LACI transcriptional; structural genomics, protein structure initiative; 2.00A {Clostridium phytofermentans}
Probab=26.26 E-value=1.1e+02 Score=29.20 Aligned_cols=33 Identities=24% Similarity=0.164 Sum_probs=21.3
Q ss_pred cCCCEEEECCCCCCCcchhHHHHHHHHHHcCCCEEEE
Q 006689 395 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 431 (635)
Q Consensus 395 ~~~DGIllPGGfG~rg~eg~i~air~are~~iP~LGI 431 (635)
.++|||++.+...+ .. ...++.+.+.++|+.-+
T Consensus 64 ~~vdgii~~~~~~~-~~---~~~~~~~~~~~iPvV~~ 96 (289)
T 3brs_A 64 RKPDVILLAAADYE-KT---YDAAKEIKDAGIKLIVI 96 (289)
T ss_dssp TCCSEEEECCSCTT-TT---HHHHTTTGGGTCEEEEE
T ss_pred hCCCEEEEeCCChH-Hh---HHHHHHHHHCCCcEEEE
Confidence 58999999874322 11 23455666678998765
No 399
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=26.25 E-value=44 Score=31.36 Aligned_cols=33 Identities=6% Similarity=0.062 Sum_probs=27.3
Q ss_pred CeEEEEccccccchh------hHHHHHHhcCcCCCCceeEEeccCCc
Q 006689 36 LQYMFLCLNECACIN------FFSLFLVQNCQYHPNTHFNLFGLDPY 76 (635)
Q Consensus 36 ~k~i~vtggv~s~lg------s~g~ll~~~~~~~~g~~v~~~K~DpY 76 (635)
|| |.|+ | -+|.| .|+..|.. +|+||-.|..||-
T Consensus 1 mk-I~vs-~-kGGvGKTt~a~~LA~~la~-----~g~~VlliD~D~~ 39 (254)
T 3kjh_A 1 MK-LAVA-G-KGGVGKTTVAAGLIKIMAS-----DYDKIYAVDGDPD 39 (254)
T ss_dssp CE-EEEE-C-SSSHHHHHHHHHHHHHHTT-----TCSCEEEEEECTT
T ss_pred CE-EEEe-c-CCCCCHHHHHHHHHHHHHH-----CCCeEEEEeCCCC
Confidence 46 5555 4 88999 88888888 9999999999994
No 400
>3hcw_A Maltose operon transcriptional repressor; RNA-binding, PSI-2, NYSGXRC, STRU genomics, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=26.24 E-value=1.9e+02 Score=27.91 Aligned_cols=31 Identities=13% Similarity=0.223 Sum_probs=20.9
Q ss_pred cCCCEEEECCCCCCCcchhHHHHHHHHHHcCCCEEEE
Q 006689 395 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 431 (635)
Q Consensus 395 ~~~DGIllPGGfG~rg~eg~i~air~are~~iP~LGI 431 (635)
.++||||+.+...+ + ..++.+.+.++|+.-+
T Consensus 67 ~~vdGiI~~~~~~~---~---~~~~~l~~~~iPvV~i 97 (295)
T 3hcw_A 67 RMVDAFILLYSKEN---D---PIKQMLIDESMPFIVI 97 (295)
T ss_dssp TCCSEEEESCCCTT---C---HHHHHHHHTTCCEEEE
T ss_pred CCcCEEEEcCcccC---h---HHHHHHHhCCCCEEEE
Confidence 58999999874322 1 3455666778998654
No 401
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=26.23 E-value=48 Score=32.73 Aligned_cols=30 Identities=13% Similarity=0.207 Sum_probs=23.6
Q ss_pred CeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEe
Q 006689 36 LQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLF 71 (635)
Q Consensus 36 ~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~ 71 (635)
||-|+||||- +.|| .+...|.. +|++|..+
T Consensus 1 M~~ilVtGat-G~iG~~l~~~L~~-----~g~~V~~~ 31 (330)
T 2c20_A 1 MNSILICGGA-GYIGSHAVKKLVD-----EGLSVVVV 31 (330)
T ss_dssp -CEEEEETTT-SHHHHHHHHHHHH-----TTCEEEEE
T ss_pred CCEEEEECCC-cHHHHHHHHHHHh-----CCCEEEEE
Confidence 4569999983 7788 88888888 89998875
No 402
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=26.10 E-value=52 Score=32.45 Aligned_cols=33 Identities=3% Similarity=-0.083 Sum_probs=25.5
Q ss_pred CCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEecc
Q 006689 35 NLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGL 73 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~ 73 (635)
+.|-|+||||- ++|| .+...|.. +|++|..+-.
T Consensus 10 ~~~~vlVTGat-G~iG~~l~~~L~~-----~g~~V~~~~r 43 (342)
T 1y1p_A 10 EGSLVLVTGAN-GFVASHVVEQLLE-----HGYKVRGTAR 43 (342)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHH-----TTCEEEEEES
T ss_pred CCCEEEEECCc-cHHHHHHHHHHHH-----CCCEEEEEeC
Confidence 34679999985 7888 78888888 8998886533
No 403
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=26.02 E-value=54 Score=33.53 Aligned_cols=34 Identities=6% Similarity=-0.146 Sum_probs=26.5
Q ss_pred CCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEeccC
Q 006689 35 NLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGLD 74 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~D 74 (635)
+||-|+||||- +.|| .|.+.|.. +|++|..+-.+
T Consensus 28 ~~~~vlVtGat-G~iG~~l~~~L~~-----~g~~V~~~~r~ 62 (379)
T 2c5a_A 28 ENLKISITGAG-GFIASHIARRLKH-----EGHYVIASDWK 62 (379)
T ss_dssp SCCEEEEETTT-SHHHHHHHHHHHH-----TTCEEEEEESS
T ss_pred cCCeEEEECCc-cHHHHHHHHHHHH-----CCCeEEEEECC
Confidence 46779999984 7788 78888888 89999886443
No 404
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=25.90 E-value=42 Score=33.90 Aligned_cols=36 Identities=6% Similarity=0.072 Sum_probs=25.3
Q ss_pred CCCeEEEEccccccchh-hHHHHHHhcCcCCC-CceeEEeccCC
Q 006689 34 LNLQYMFLCLNECACIN-FFSLFLVQNCQYHP-NTHFNLFGLDP 75 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~-g~~v~~~K~Dp 75 (635)
|++|-|+||||- ..|| .|...|.. + |++|..+-.+|
T Consensus 22 m~~~~vlVtGat-G~iG~~l~~~L~~-----~~g~~V~~~~r~~ 59 (372)
T 3slg_A 22 MKAKKVLILGVN-GFIGHHLSKRILE-----TTDWEVFGMDMQT 59 (372)
T ss_dssp -CCCEEEEESCS-SHHHHHHHHHHHH-----HSSCEEEEEESCC
T ss_pred cCCCEEEEECCC-ChHHHHHHHHHHh-----CCCCEEEEEeCCh
Confidence 456789999974 6677 66666655 5 99998875543
No 405
>3egc_A Putative ribose operon repressor; structural genomics, unknown function, DNA-binding, transcri transcription regulation, PSI-2; 2.35A {Burkholderia thailandensis}
Probab=25.89 E-value=1.2e+02 Score=29.15 Aligned_cols=84 Identities=6% Similarity=0.141 Sum_probs=41.3
Q ss_pred CccEEEEEeccCCCcchH-HHHHHHHHHccccceeeeEEEEecCCCCCccccCCChhhhhHHHHhc--cCCCEEEECCCC
Q 006689 330 EPVRIAMVGKYTGLSDAY-LSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGGF 406 (635)
Q Consensus 330 ~~v~IalVGkY~~l~DaY-~SI~~AL~~ag~~~~vkl~i~wi~s~~le~~~~~~~p~~y~~a~~~L--~~~DGIllPGGf 406 (635)
+..+||++-. ...+.| ..+++.++.+..+.+..+.+.+ +.. +++.-.+..+.+ .++||||+.+..
T Consensus 7 ~~~~Igvv~~--~~~~~~~~~~~~gi~~~a~~~g~~~~~~~--~~~--------~~~~~~~~~~~l~~~~vdgiIi~~~~ 74 (291)
T 3egc_A 7 RSNVVGLIVS--DIENVFFAEVASGVESEARHKGYSVLLAN--TAE--------DIVREREAVGQFFERRVDGLILAPSE 74 (291)
T ss_dssp CCCEEEEEES--CTTSHHHHHHHHHHHHHHHHTTCEEEEEE--CTT--------CHHHHHHHHHHHHHTTCSEEEECCCS
T ss_pred CCcEEEEEEC--CCcchHHHHHHHHHHHHHHHCCCEEEEEe--CCC--------CHHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 4468888842 233343 3455555544444444333333 221 111111122233 589999998853
Q ss_pred CCCcchhHHHHHHHHHHcCCCEEEE
Q 006689 407 GNRGVQGKILAAKYAREHRIPYLGI 431 (635)
Q Consensus 407 G~rg~eg~i~air~are~~iP~LGI 431 (635)
.. ...++.+.+.++|+.-+
T Consensus 75 ~~------~~~~~~~~~~~iPvV~~ 93 (291)
T 3egc_A 75 GE------HDYLRTELPKTFPIVAV 93 (291)
T ss_dssp SC------CHHHHHSSCTTSCEEEE
T ss_pred CC------hHHHHHhhccCCCEEEE
Confidence 31 13345555667887644
No 406
>3lkv_A Uncharacterized conserved domain protein; ATPase binding cassette, PSI, MCSG, structural genomics, Pro structure initiative; HET: PHE; 2.20A {Vibrio cholerae}
Probab=25.82 E-value=2.9e+02 Score=27.22 Aligned_cols=37 Identities=19% Similarity=0.214 Sum_probs=23.2
Q ss_pred hccCCCEEEECCCCCCCcchhHHHH-HHHHHHcCCCEEEEe
Q 006689 393 LLKGADGILVPGGFGNRGVQGKILA-AKYAREHRIPYLGIC 432 (635)
Q Consensus 393 ~L~~~DGIllPGGfG~rg~eg~i~a-ir~are~~iP~LGIC 432 (635)
...+.|+|+++. +....+.+.+ ...+.+.++|++|.-
T Consensus 190 l~~~~d~i~~~~---d~~~~~~~~~i~~~~~~~~iPv~~~~ 227 (302)
T 3lkv_A 190 IAEKSDVIYALI---DNTVASAIEGMIVAANQAKTPVFGAA 227 (302)
T ss_dssp HHTTCSEEEECS---CHHHHHTHHHHHHHHHHTTCCEEESS
T ss_pred ccCCeeEEEEeC---CcchhhHHHHHHHHHhhcCCceeecc
Confidence 346899999986 2222222333 345677899999853
No 407
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=25.76 E-value=46 Score=33.30 Aligned_cols=34 Identities=3% Similarity=0.043 Sum_probs=25.4
Q ss_pred CCCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEecc
Q 006689 34 LNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGL 73 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~ 73 (635)
+++|-|+|||| -+.|| .|.+.|.. +|++|..+-.
T Consensus 25 ~~~~~vlVtGa-tG~iG~~l~~~L~~-----~g~~V~~~~r 59 (343)
T 2b69_A 25 KDRKRILITGG-AGFVGSHLTDKLMM-----DGHEVTVVDN 59 (343)
T ss_dssp --CCEEEEETT-TSHHHHHHHHHHHH-----TTCEEEEEEC
T ss_pred cCCCEEEEEcC-ccHHHHHHHHHHHH-----CCCEEEEEeC
Confidence 45678999998 36788 78888888 8999988643
No 408
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=25.72 E-value=50 Score=33.58 Aligned_cols=32 Identities=6% Similarity=-0.021 Sum_probs=25.5
Q ss_pred CeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEecc
Q 006689 36 LQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGL 73 (635)
Q Consensus 36 ~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~ 73 (635)
+|-|+||||- ++|| .|.+.|.. +|++|..+--
T Consensus 28 ~k~vlVtGat-G~IG~~l~~~L~~-----~g~~V~~~~r 60 (381)
T 1n7h_A 28 RKIALITGIT-GQDGSYLTEFLLG-----KGYEVHGLIR 60 (381)
T ss_dssp CCEEEEETTT-SHHHHHHHHHHHH-----TTCEEEEEEC
T ss_pred CCeEEEEcCC-chHHHHHHHHHHH-----CCCEEEEEec
Confidence 3789999984 7788 88888888 8999887643
No 409
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=25.40 E-value=46 Score=33.16 Aligned_cols=30 Identities=10% Similarity=0.021 Sum_probs=23.5
Q ss_pred CeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEe
Q 006689 36 LQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLF 71 (635)
Q Consensus 36 ~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~ 71 (635)
+|-|+||||- ++|| .|.+.|.. +|++|..+
T Consensus 2 ~~~vlVtGat-G~iG~~l~~~L~~-----~g~~V~~~ 32 (348)
T 1ek6_A 2 AEKVLVTGGA-GYIGSHTVLELLE-----AGYLPVVI 32 (348)
T ss_dssp CSEEEEETTT-SHHHHHHHHHHHH-----TTCCEEEE
T ss_pred CCEEEEECCC-CHHHHHHHHHHHH-----CCCEEEEE
Confidence 3569999974 7788 78888888 78888765
No 410
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=25.33 E-value=53 Score=31.27 Aligned_cols=35 Identities=11% Similarity=-0.062 Sum_probs=24.3
Q ss_pred CCCeEEEEccccccchh-hHHHHH-HhcCcCCCCceeEEeccC
Q 006689 34 LNLQYMFLCLNECACIN-FFSLFL-VQNCQYHPNTHFNLFGLD 74 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg-s~g~ll-~~~~~~~~g~~v~~~K~D 74 (635)
++.|.|+||||- ++|| .+.+.| +. +|++|..+=.+
T Consensus 2 ~~~k~vlITGas-ggIG~~~a~~L~~~-----~g~~V~~~~r~ 38 (276)
T 1wma_A 2 SGIHVALVTGGN-KGIGLAIVRDLCRL-----FSGDVVLTARD 38 (276)
T ss_dssp CCCCEEEESSCS-SHHHHHHHHHHHHH-----SSSEEEEEESS
T ss_pred CCCCEEEEeCCC-cHHHHHHHHHHHHh-----cCCeEEEEeCC
Confidence 346889999985 8999 666554 43 48877765433
No 411
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=25.22 E-value=45 Score=32.73 Aligned_cols=27 Identities=7% Similarity=0.069 Sum_probs=22.1
Q ss_pred EEEccccccchh-hHHHHHHhcCcCCCCceeEEe
Q 006689 39 MFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLF 71 (635)
Q Consensus 39 i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~ 71 (635)
|+||||- ++|| .+.+.|.. +|++|..+
T Consensus 3 vlVTGat-G~iG~~l~~~L~~-----~G~~V~~~ 30 (311)
T 2p5y_A 3 VLVTGGA-GFIGSHIVEDLLA-----RGLEVAVL 30 (311)
T ss_dssp EEEETTT-SHHHHHHHHHHHT-----TTCEEEEE
T ss_pred EEEEeCC-cHHHHHHHHHHHH-----CCCEEEEE
Confidence 8999974 7788 78888888 89998875
No 412
>3u5c_A 40S ribosomal protein S0-A; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_A 3o30_A 3o2z_A 3u5g_A 3jyv_B* 1s1h_B
Probab=25.14 E-value=3e+02 Score=27.66 Aligned_cols=78 Identities=15% Similarity=0.193 Sum_probs=48.7
Q ss_pred ccEEEEEeccCCCcchHHHHHHHHHHccccceeeeEEEEecCCCCCccccCCChhhhhHHHHhccCCCEEEECCCCCCCc
Q 006689 331 PVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRG 410 (635)
Q Consensus 331 ~v~IalVGkY~~l~DaY~SI~~AL~~ag~~~~vkl~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIllPGGfG~rg 410 (635)
.-+|.+||- -..+-..|.+.-...|+.. +.=.|++-. |+.... ..+..+|.|||.. + .
T Consensus 70 ~~~vlfVgT---k~~~q~~V~k~A~~~g~~~---v~~rwlgGt-LTN~~t-----------~~f~~PdllvV~D-p---~ 127 (252)
T 3u5c_A 70 PEDVVAISS---RTFGQRAVLKFAAHTGATP---IAGRFTPGS-FTNYIT-----------RSFKEPRLVIVTD-P---R 127 (252)
T ss_dssp GGGEEEEEC---SHHHHHHHHHHHHHSSCEE---EESCCCTTS-SSCTTS-----------TTCCCCSEEEESC-T---T
T ss_pred CCEEEEEeC---CcHHHHHHHHHHHHhCCce---ecCcccCCc-ccChhh-----------hhccCCceEEEeC-C---c
Confidence 346888872 1224456666666666543 233576532 322111 2357899999986 2 1
Q ss_pred chhHHHHHHHHHHcCCCEEEEe
Q 006689 411 VQGKILAAKYAREHRIPYLGIC 432 (635)
Q Consensus 411 ~eg~i~air~are~~iP~LGIC 432 (635)
....+++.|...+||+.|+|
T Consensus 128 --~d~~ai~EA~~l~IP~Ial~ 147 (252)
T 3u5c_A 128 --SDAQAIKEASYVNIPVIALT 147 (252)
T ss_dssp --TTHHHHHHHHTTTCCEEEEE
T ss_pred --cchHHHHHHHHcCCCEEEEE
Confidence 23578889999999999999
No 413
>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...
Probab=25.06 E-value=50 Score=33.38 Aligned_cols=34 Identities=9% Similarity=-0.183 Sum_probs=27.9
Q ss_pred CeEEEEccccc-cchh-hHHHHHHhcCcCCCCceeEEeccC
Q 006689 36 LQYMFLCLNEC-ACIN-FFSLFLVQNCQYHPNTHFNLFGLD 74 (635)
Q Consensus 36 ~k~i~vtggv~-s~lg-s~g~ll~~~~~~~~g~~v~~~K~D 74 (635)
-|.++|||+-= |||| ++.+.|-. +|++|.+.=.+
T Consensus 2 ~k~~lITGas~~~GIG~aiA~~la~-----~G~~Vv~~~~~ 37 (329)
T 3lt0_A 2 EDICFIAGIGDTNGYGWGIAKELSK-----RNVKIIFGIWP 37 (329)
T ss_dssp CCEEEEECCSSSSSHHHHHHHHHHH-----TTCEEEEEECH
T ss_pred CcEEEEECCCCCCchHHHHHHHHHH-----CCCEEEEEecC
Confidence 47899999863 6999 99999999 99999864333
No 414
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=24.92 E-value=40 Score=33.87 Aligned_cols=34 Identities=6% Similarity=-0.085 Sum_probs=26.0
Q ss_pred CCCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEecc
Q 006689 34 LNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGL 73 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~ 73 (635)
+++|-|+|||| -+.|| .|...|.. +|++|..+-.
T Consensus 25 ~~~~~vlVtGa-tG~iG~~l~~~L~~-----~g~~V~~~~r 59 (352)
T 1sb8_A 25 AQPKVWLITGV-AGFIGSNLLETLLK-----LDQKVVGLDN 59 (352)
T ss_dssp HSCCEEEEETT-TSHHHHHHHHHHHH-----TTCEEEEEEC
T ss_pred ccCCeEEEECC-CcHHHHHHHHHHHH-----CCCEEEEEeC
Confidence 34567999998 47788 88888888 8988887643
No 415
>3o1i_D Periplasmic protein TORT; ligand free, two component sensor, periplasmic binding prote signaling protein; HET: PE4; 2.80A {Vibrio parahaemolyticus} PDB: 3o1h_B* 3o1j_C
Probab=24.92 E-value=2.2e+02 Score=27.20 Aligned_cols=87 Identities=17% Similarity=0.160 Sum_probs=43.6
Q ss_pred CccEEEEEeccCCCcchH-HHHHHHHHHccccceeeeEEEEecCCCCCccccCCChhhhhHHHHhc--cCCCEEEECCCC
Q 006689 330 EPVRIAMVGKYTGLSDAY-LSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGGF 406 (635)
Q Consensus 330 ~~v~IalVGkY~~l~DaY-~SI~~AL~~ag~~~~vkl~i~wi~s~~le~~~~~~~p~~y~~a~~~L--~~~DGIllPGGf 406 (635)
++.+|+++-. ...+.| ..+++.++.+..+.+..+.+ .++... .+++...+..+.+ .++||||+.+..
T Consensus 4 ~~~~Igvi~~--~~~~~~~~~~~~g~~~~a~~~g~~~~~--~~~~~~------~~~~~~~~~~~~~~~~~vdgiii~~~~ 73 (304)
T 3o1i_D 4 SDEKICAIYP--HLKDSYWLSVNYGMVSEAEKQGVNLRV--LEAGGY------PNKSRQEQQLALCTQWGANAIILGTVD 73 (304)
T ss_dssp -CCEEEEEES--CSCSHHHHHHHHHHHHHHHHHTCEEEE--EECSST------TCHHHHHHHHHHHHHHTCSEEEECCSS
T ss_pred CCcEEEEEeC--CCCCcHHHHHHHHHHHHHHHcCCeEEE--EcCCCC------CCHHHHHHHHHHHHHcCCCEEEEeCCC
Confidence 4568998842 344444 45666665555444444333 333210 0111111222222 489999998743
Q ss_pred CCCcchhHHHHHHHHHHcCCCEEEE
Q 006689 407 GNRGVQGKILAAKYAREHRIPYLGI 431 (635)
Q Consensus 407 G~rg~eg~i~air~are~~iP~LGI 431 (635)
.+ ... ..++.+. .++|+.-+
T Consensus 74 ~~-~~~---~~~~~~~-~~iPvV~~ 93 (304)
T 3o1i_D 74 PH-AYE---HNLKSWV-GNTPVFAT 93 (304)
T ss_dssp TT-SST---TTHHHHT-TTSCEEEC
T ss_pred hh-HHH---HHHHHHc-CCCCEEEe
Confidence 22 122 2355566 79998766
No 416
>2fvy_A D-galactose-binding periplasmic protein; periplasmic binding protien, hinge, chemotaxis, transport,; HET: BGC; 0.92A {Escherichia coli} SCOP: c.93.1.1 PDB: 1glg_A* 2fw0_A* 2gbp_A* 2qw1_A* 2hph_A* 2ipn_A* 2ipm_A* 2ipl_A* 1gca_A* 1gcg_A 3ga5_A* 3gbp_A*
Probab=24.51 E-value=3.7e+02 Score=25.62 Aligned_cols=35 Identities=14% Similarity=0.045 Sum_probs=23.3
Q ss_pred cCCCEEEECCCCCCCcchhHHHHHHHHHHcCCCEEEEeh
Q 006689 395 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGICL 433 (635)
Q Consensus 395 ~~~DGIllPGGfG~rg~eg~i~air~are~~iP~LGICL 433 (635)
.++||||+.+... ......++.+.+.++|+.-+..
T Consensus 58 ~~vdgiii~~~~~----~~~~~~~~~~~~~~iPvV~~~~ 92 (309)
T 2fvy_A 58 KGVKALAINLVDP----AAAGTVIEKARGQNVPVVFFNK 92 (309)
T ss_dssp TTCSEEEECCSSG----GGHHHHHHHHHTTTCCEEEESS
T ss_pred cCCCEEEEeCCCc----chhHHHHHHHHHCCCcEEEecC
Confidence 5899999976321 1223456777778999876643
No 417
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=24.46 E-value=49 Score=32.48 Aligned_cols=31 Identities=13% Similarity=0.014 Sum_probs=24.3
Q ss_pred eEEEEccccccchh-hHHHHHHhcCcCCCCceeEEecc
Q 006689 37 QYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGL 73 (635)
Q Consensus 37 k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~ 73 (635)
|-|+||||- +.|| .|.+.|.. +|++|..+-.
T Consensus 3 ~~vlVtGat-G~iG~~l~~~L~~-----~g~~V~~~~r 34 (315)
T 2ydy_A 3 RRVLVTGAT-GLLGRAVHKEFQQ-----NNWHAVGCGF 34 (315)
T ss_dssp CEEEEETTT-SHHHHHHHHHHHT-----TTCEEEEEC-
T ss_pred CeEEEECCC-cHHHHHHHHHHHh-----CCCeEEEEcc
Confidence 569999984 7788 88888888 8999987643
No 418
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=24.30 E-value=52 Score=32.08 Aligned_cols=33 Identities=9% Similarity=-0.047 Sum_probs=25.1
Q ss_pred CeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEeccC
Q 006689 36 LQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGLD 74 (635)
Q Consensus 36 ~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~D 74 (635)
+|-|+||||- +.+| ++.+.|.. +|++|..+--+
T Consensus 4 ~~~ilVtGat-G~iG~~l~~~L~~-----~g~~V~~l~R~ 37 (308)
T 1qyc_A 4 RSRILLIGAT-GYIGRHVAKASLD-----LGHPTFLLVRE 37 (308)
T ss_dssp CCCEEEESTT-STTHHHHHHHHHH-----TTCCEEEECCC
T ss_pred CCEEEEEcCC-cHHHHHHHHHHHh-----CCCCEEEEECC
Confidence 4559999974 6788 88888888 79888875443
No 419
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=24.24 E-value=34 Score=33.12 Aligned_cols=32 Identities=6% Similarity=0.009 Sum_probs=24.1
Q ss_pred Ce-EEEEccccccchh-hHHHHHHhcCcCCCCceeEEecc
Q 006689 36 LQ-YMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGL 73 (635)
Q Consensus 36 ~k-~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~ 73 (635)
|| -|+||||- +.|| .+...|.. +|++|..+--
T Consensus 4 M~m~ilVtGat-G~iG~~l~~~L~~-----~g~~V~~~~r 37 (287)
T 3sc6_A 4 MKERVIITGAN-GQLGKQLQEELNP-----EEYDIYPFDK 37 (287)
T ss_dssp -CEEEEEESTT-SHHHHHHHHHSCT-----TTEEEEEECT
T ss_pred ceeEEEEECCC-CHHHHHHHHHHHh-----CCCEEEEecc
Confidence 44 69999974 6777 77788877 8999988644
No 420
>2iks_A DNA-binding transcriptional dual regulator; escherichia coli structural genomics, PSI-2, protein structure initiative; 1.85A {Escherichia coli}
Probab=24.23 E-value=2.3e+02 Score=27.16 Aligned_cols=32 Identities=13% Similarity=0.211 Sum_probs=20.1
Q ss_pred cCCCEEEECCCCCCCcchhHHHHHHHHHHcCCCEEEE
Q 006689 395 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 431 (635)
Q Consensus 395 ~~~DGIllPGGfG~rg~eg~i~air~are~~iP~LGI 431 (635)
.++|||++.+..... . ..++.+.+.++|+.-+
T Consensus 75 ~~vdgii~~~~~~~~--~---~~~~~~~~~~iPvV~~ 106 (293)
T 2iks_A 75 RQVDAIIVSTSLPPE--H---PFYQRWANDPFPIVAL 106 (293)
T ss_dssp TTCSEEEECCSSCTT--C---HHHHTTTTSSSCEEEE
T ss_pred cCCCEEEEeCCCCCc--H---HHHHHHHhCCCCEEEE
Confidence 579999998743221 1 2345555678997655
No 421
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=24.22 E-value=44 Score=33.26 Aligned_cols=33 Identities=9% Similarity=0.211 Sum_probs=23.8
Q ss_pred CeEEEEccccccchh-hHHHHHHhcCcCCC--CceeEEeccC
Q 006689 36 LQYMFLCLNECACIN-FFSLFLVQNCQYHP--NTHFNLFGLD 74 (635)
Q Consensus 36 ~k~i~vtggv~s~lg-s~g~ll~~~~~~~~--g~~v~~~K~D 74 (635)
||-|+|||| -+.|| .|...|.. + |++|..+-.+
T Consensus 4 m~~vlVTGa-tG~iG~~l~~~L~~-----~~~g~~V~~~~r~ 39 (348)
T 1oc2_A 4 FKNIIVTGG-AGFIGSNFVHYVYN-----NHPDVHVTVLDKL 39 (348)
T ss_dssp CSEEEEETT-TSHHHHHHHHHHHH-----HCTTCEEEEEECC
T ss_pred CcEEEEeCC-ccHHHHHHHHHHHH-----hCCCCEEEEEeCC
Confidence 577999997 36788 67766666 5 7888776443
No 422
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=24.19 E-value=67 Score=28.54 Aligned_cols=33 Identities=3% Similarity=0.083 Sum_probs=25.2
Q ss_pred CeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEeccCC
Q 006689 36 LQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGLDP 75 (635)
Q Consensus 36 ~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~Dp 75 (635)
.+-|+|.|+ ..+| .++..|+. +|++|+.+-.||
T Consensus 19 ~~~v~IiG~--G~iG~~la~~L~~-----~g~~V~vid~~~ 52 (155)
T 2g1u_A 19 SKYIVIFGC--GRLGSLIANLASS-----SGHSVVVVDKNE 52 (155)
T ss_dssp CCEEEEECC--SHHHHHHHHHHHH-----TTCEEEEEESCG
T ss_pred CCcEEEECC--CHHHHHHHHHHHh-----CCCeEEEEECCH
Confidence 345667774 7778 89999999 899999876554
No 423
>3npg_A Uncharacterized DUF364 family protein; protein with unknown function from DUF364 family, structural genomics; 2.70A {Pyrococcus horikoshii}
Probab=24.01 E-value=58 Score=32.56 Aligned_cols=66 Identities=20% Similarity=0.318 Sum_probs=36.3
Q ss_pred HHHHHhcCCCCccEEEEEeccCCCcchHHHHHHHHHHccccceeeeEEEEecCCCCCccccCCChhhhhHHH--HhccCC
Q 006689 320 SRAEICDGLHEPVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAW--KLLKGA 397 (635)
Q Consensus 320 ~lv~~~~~~~~~v~IalVGkY~~l~DaY~SI~~AL~~ag~~~~vkl~i~wi~s~~le~~~~~~~p~~y~~a~--~~L~~~ 397 (635)
+..+.+. .....||++|| .+..+++.|... +++.+. |+.+.+... ..|..+. +.+..+
T Consensus 106 d~~~~~~-~~~~~kV~vIG-------~~p~l~~~l~~~-~~v~V~---------d~~p~~~~~--~~~~~~~e~~~l~~~ 165 (249)
T 3npg_A 106 DVTELIQ-QDEIKRIAIIG-------NMPPVVRTLKEK-YEVYVF---------ERNMKLWDR--DTYSDTLEYHILPEV 165 (249)
T ss_dssp CHHHHHH-TSCCSEEEEES-------CCHHHHHHHTTT-SEEEEE---------CCSGGGCCS--SEECGGGHHHHGGGC
T ss_pred CHHHHHh-hcCCCEEEEEC-------CCHHHHHHHhcc-CCEEEE---------ECCCcccCC--CCCChhHHHhhhccC
Confidence 3444443 22346999998 235678888877 555442 122211100 0111111 368899
Q ss_pred CEEEECCC
Q 006689 398 DGILVPGG 405 (635)
Q Consensus 398 DGIllPGG 405 (635)
|.++++|-
T Consensus 166 D~v~iTGs 173 (249)
T 3npg_A 166 DGIIASAS 173 (249)
T ss_dssp SEEEEETT
T ss_pred CEEEEEee
Confidence 99999993
No 424
>1usg_A Leucine-specific binding protein; leucine-binding protein, X-RAY crystallography, protein structure, ABC transport systems, transport protein; 1.53A {Escherichia coli} SCOP: c.93.1.1 PDB: 1usi_A* 1usk_A 2lbp_A 1z15_A 1z16_A 1z17_A 1z18_A 2liv_A
Probab=23.96 E-value=2.8e+02 Score=26.92 Aligned_cols=34 Identities=9% Similarity=-0.030 Sum_probs=21.1
Q ss_pred cCCCEEEECCCCCCCcchhHHHHHHHHHHcCCCEEEEeh
Q 006689 395 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGICL 433 (635)
Q Consensus 395 ~~~DGIllPGGfG~rg~eg~i~air~are~~iP~LGICL 433 (635)
.++||||.|.+ . .....++..+.+.++|++.+..
T Consensus 68 ~~v~~iig~~~---s--~~~~~~~~~~~~~~ip~v~~~~ 101 (346)
T 1usg_A 68 DGIKYVIGHLC---S--SSTQPASDIYEDEGILMISPGA 101 (346)
T ss_dssp TTCCEEECCSS---H--HHHHHHHHHHHHHTCEEEECCC
T ss_pred CCCCEEEcCCC---c--HHHHHHHHHHHHCCCeEEeeCC
Confidence 58999984331 1 1223445666778999987653
No 425
>2o20_A Catabolite control protein A; CCPA, transcriptional regulator, helix-turn-helix, transcrip; 1.90A {Lactococcus lactis}
Probab=23.60 E-value=2.9e+02 Score=27.10 Aligned_cols=32 Identities=22% Similarity=0.268 Sum_probs=20.4
Q ss_pred cCCCEEEECCCCCCCcchhHHHHHHHHHHcCCCEEEEe
Q 006689 395 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGIC 432 (635)
Q Consensus 395 ~~~DGIllPGGfG~rg~eg~i~air~are~~iP~LGIC 432 (635)
.++||||+.+...+ . ..++.+.+.++|+.-+.
T Consensus 118 ~~vdgiI~~~~~~~---~---~~~~~l~~~~iPvV~~~ 149 (332)
T 2o20_A 118 KQVDGIVYMGSSLD---E---KIRTSLKNSRTPVVLVG 149 (332)
T ss_dssp TTCSEEEECSSCCC---H---HHHHHHHHHCCCEEEES
T ss_pred CCCCEEEEeCCCCC---H---HHHHHHHhCCCCEEEEc
Confidence 58999999874221 1 23455556789987653
No 426
>3p94_A GDSL-like lipase; serine hydrolase, catalytic triad, flavodo structural genomics, joint center for structural genomics; HET: MSE PG4; 1.93A {Parabacteroides distasonis}
Probab=23.58 E-value=45 Score=30.12 Aligned_cols=46 Identities=20% Similarity=0.164 Sum_probs=28.1
Q ss_pred CCCcEEEEeeCCcccccCc-------chHHHHHHHhhhhcCCCCEEEEeeeeeee
Q 006689 172 GPVDVCVIELGGTIGDIES-------MPFIEALGQFSYRVGPGNFCLIHVSLVPV 219 (635)
Q Consensus 172 ~~~dv~i~EiGGTvGdies-------~pf~ea~rq~~~~~g~~n~~~ihv~~vp~ 219 (635)
.+||+|+|.+|. .|+-. .-|.+.++++-.++...+.-.|-++..|.
T Consensus 73 ~~pd~vvi~~G~--ND~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~vil~~~~p~ 125 (204)
T 3p94_A 73 LKPKAVVILAGI--NDIAHNNGVIALENVFGNLVSMAELAKANHIKVIFCSVLPA 125 (204)
T ss_dssp GCEEEEEEECCH--HHHTTTTSCCCHHHHHHHHHHHHHHHHHTTCEEEEECCCCC
T ss_pred CCCCEEEEEeec--CccccccCCCCHHHHHHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 469999999985 44432 34666666665555434555555565553
No 427
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=23.51 E-value=1.5e+02 Score=26.06 Aligned_cols=76 Identities=14% Similarity=0.201 Sum_probs=43.6
Q ss_pred CCccEEEEEeccCCCcchHHHHHHHHHHccccceeeeEEEEecCCCCCccccCCChhhhhHHHHhc--cCCCEEEECCCC
Q 006689 329 HEPVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGGF 406 (635)
Q Consensus 329 ~~~v~IalVGkY~~l~DaY~SI~~AL~~ag~~~~vkl~i~wi~s~~le~~~~~~~p~~y~~a~~~L--~~~DGIllPGGf 406 (635)
.+++||.+|+|--.. -..+.+.|+..|+++.. .+.+- .+|.+.+ ..+|.|++==.
T Consensus 6 ~r~~rILiVdD~~~~---~~~l~~~L~~~G~~v~~-------~a~~g------------~eAl~~~~~~~~DlvllDi~- 62 (123)
T 2lpm_A 6 ERRLRVLVVEDESMI---AMLIEDTLCELGHEVAA-------TASRM------------QEALDIARKGQFDIAIIDVN- 62 (123)
T ss_dssp CCCCCEEEESSSTTT---SHHHHHHHHHHCCCCCB-------CSCCH------------HHHHHHHHHCCSSEEEECSS-
T ss_pred CCCCEEEEEeCCHHH---HHHHHHHHHHCCCEEEE-------EECCH------------HHHHHHHHhCCCCEEEEecC-
Confidence 346899999865433 34566778888987521 11111 1244443 47898887221
Q ss_pred CCCcchhHHHHHHHHHHcCCCEE
Q 006689 407 GNRGVQGKILAAKYAREHRIPYL 429 (635)
Q Consensus 407 G~rg~eg~i~air~are~~iP~L 429 (635)
-|+..| +++++..|+.++|+.
T Consensus 63 -mP~~~G-~el~~~lr~~~ipvI 83 (123)
T 2lpm_A 63 -LDGEPS-YPVADILAERNVPFI 83 (123)
T ss_dssp -SSSCCS-HHHHHHHHHTCCSSC
T ss_pred -CCCCCH-HHHHHHHHcCCCCEE
Confidence 122223 356677777888853
No 428
>3rfq_A Pterin-4-alpha-carbinolamine dehydratase MOAB2; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: B3P; 2.25A {Mycobacterium marinum} PDB: 3tcr_A
Probab=23.44 E-value=1.1e+02 Score=29.16 Aligned_cols=54 Identities=24% Similarity=0.314 Sum_probs=0.0
Q ss_pred eEEcccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCCc-ccc-------cCcc------hHHHHHHHhhhhcCC
Q 006689 145 VQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGT-IGD-------IESM------PFIEALGQFSYRVGP 206 (635)
Q Consensus 145 vQviPHit~~i~~~i~~~~~~pvd~~~~~~dv~i~EiGGT-vGd-------ies~------pf~ea~rq~~~~~g~ 206 (635)
..+||-=-++|++.|++.. ..++|++|+ .||| +|+ ++.+ -|-|++|+...+-|+
T Consensus 68 ~~iv~Dd~~~I~~al~~a~-------~~~~DlVIt-tGGts~g~~D~t~eal~~l~~~~l~G~~~~f~~v~~kpG~ 135 (185)
T 3rfq_A 68 VVAVEADEVDIRNALNTAV-------IGGVDLVVS-VGGTGVTPRDVTPESTREILDREILGIAEAIRASGLSAGI 135 (185)
T ss_dssp EEEECSCHHHHHHHHHHHH-------HTTCSEEEE-ESCCSSSTTCCHHHHHHTTCSEECHHHHHHHHHHHHHTTC
T ss_pred EEEeCCCHHHHHHHHHHHH-------hCCCCEEEE-CCCCCCCCcccHHHHHHHHhcccCccHHHHHHHHhcCCCC
No 429
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron}
Probab=23.43 E-value=58 Score=29.71 Aligned_cols=46 Identities=17% Similarity=0.210 Sum_probs=26.5
Q ss_pred CCCcEEEEeeCCcccccCcc--hHHHHHHHhhhhc---CCCCEEEEeeeeeeee
Q 006689 172 GPVDVCVIELGGTIGDIESM--PFIEALGQFSYRV---GPGNFCLIHVSLVPVL 220 (635)
Q Consensus 172 ~~~dv~i~EiGGTvGdies~--pf~ea~rq~~~~~---g~~n~~~ihv~~vp~~ 220 (635)
.+||+|+|.+|.- |+... -|.+.+++|-.++ ++ +.-.|-++..|..
T Consensus 73 ~~pd~Vvi~~G~N--D~~~~~~~~~~~l~~ii~~l~~~~p-~~~ii~~~~~P~~ 123 (200)
T 4h08_A 73 TKFDVIHFNNGLH--GFDYTEEEYDKSFPKLIKIIRKYAP-KAKLIWANTTPVR 123 (200)
T ss_dssp SCCSEEEECCCSS--CTTSCHHHHHHHHHHHHHHHHHHCT-TCEEEEECCCCCE
T ss_pred CCCCeEEEEeeeC--CCCCCHHHHHHHHHHHHHHHhhhCC-CccEEEeccCCCc
Confidence 5799999999964 65322 2555566553332 33 3444555555544
No 430
>3lft_A Uncharacterized protein; ABC, ATPase, cassette, L-Trp, PSI, MCSG, structural genomics center for structural genomics; HET: MSE TRP; 1.35A {Streptococcus pneumoniae}
Probab=23.40 E-value=1.5e+02 Score=28.76 Aligned_cols=84 Identities=10% Similarity=0.043 Sum_probs=44.0
Q ss_pred cEEEEEeccCCC--cchHHHHHHHHHHccccceeeeEEEEecCCCCCccccCCChhhhhHHHHhccCCCEEEECCCCCCC
Q 006689 332 VRIAMVGKYTGL--SDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNR 409 (635)
Q Consensus 332 v~IalVGkY~~l--~DaY~SI~~AL~~ag~~~~vkl~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIllPGGfG~r 409 (635)
-|||++..-... .+-+..+.++|+..|+++. ..|+... + +.+..+.+.+..+|+|+.++ |.
T Consensus 134 ~~I~~i~~~~~~~~~~r~~g~~~al~~~gi~~~----~~~~~~~--~--------~~~~~~~~l~~~~dai~~~~---D~ 196 (295)
T 3lft_A 134 KTIGALYSSSEDNSKTQVEEFKAYAEKAGLTVE----TFAVPST--N--------EIASTVTVMTSKVDAIWVPI---DN 196 (295)
T ss_dssp CEEEEEEETTCHHHHHHHHHHHHHHHHTTCEEE----EEEESSG--G--------GHHHHHHHHTTTCSEEEECS---CH
T ss_pred cEEEEEeCCCCcchHHHHHHHHHHHHHcCCEEE----EEecCCH--H--------HHHHHHHHHHhcCCEEEECC---ch
Confidence 389999543211 1123455677777776543 3344321 1 12233334457899999976 22
Q ss_pred cchhHHHHHHH-HHHcCCCEEEEe
Q 006689 410 GVQGKILAAKY-AREHRIPYLGIC 432 (635)
Q Consensus 410 g~eg~i~air~-are~~iP~LGIC 432 (635)
-.-+.+.+++. +...++|++|.=
T Consensus 197 ~a~g~~~~l~~~~~~~~i~vig~d 220 (295)
T 3lft_A 197 TIASGFPTVVSSNQSSKKPIYPSA 220 (295)
T ss_dssp HHHHTHHHHHHHTTTTCCCEEESS
T ss_pred hHHHHHHHHHHHHHHcCCCEEeCC
Confidence 22233343332 234579998873
No 431
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=23.33 E-value=1.6e+02 Score=29.51 Aligned_cols=68 Identities=16% Similarity=0.119 Sum_probs=32.8
Q ss_pred ccEEEEEeccCCCcchHHHHHHHHHHccccceeeeEEEEe-cCCCCCccccC-CChhhhhHHHHhcc--CCCEEEECCC
Q 006689 331 PVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWI-PACDLEDATEK-ENPDAYKAAWKLLK--GADGILVPGG 405 (635)
Q Consensus 331 ~v~IalVGkY~~l~DaY~SI~~AL~~ag~~~~vkl~i~wi-~s~~le~~~~~-~~p~~y~~a~~~L~--~~DGIllPGG 405 (635)
++|||||| .+... ...+.++|.+.++++... +- +.+..+.-... ..+..|....+.+. ++|.|+|+--
T Consensus 4 ~~rvgiiG-~G~~~--~~~~~~~l~~~~~~lvav----~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~~D~V~i~tp 75 (336)
T 2p2s_A 4 KIRFAAIG-LAHNH--IYDMCQQLIDAGAELAGV----FESDSDNRAKFTSLFPSVPFAASAEQLITDASIDLIACAVI 75 (336)
T ss_dssp CCEEEEEC-CSSTH--HHHHHHHHHHTTCEEEEE----ECSCTTSCHHHHHHSTTCCBCSCHHHHHTCTTCCEEEECSC
T ss_pred ccEEEEEC-CChHH--HHHhhhhhcCCCcEEEEE----eCCCHHHHHHHHHhcCCCcccCCHHHHhhCCCCCEEEEeCC
Confidence 57999998 55332 124567776655543221 21 12111100000 01122434445554 6899999863
No 432
>2rjo_A Twin-arginine translocation pathway signal protei; PSI-2, NYSGXRC, twin arginine translocation pathway signal P structural genomics; HET: GAL; 2.05A {Burkholderia phytofirmans}
Probab=23.33 E-value=2.6e+02 Score=27.46 Aligned_cols=34 Identities=9% Similarity=-0.152 Sum_probs=22.3
Q ss_pred cC--CCEEEECCCCCCCcchhHHHHHHHHHHcCCCEEEEe
Q 006689 395 KG--ADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGIC 432 (635)
Q Consensus 395 ~~--~DGIllPGGfG~rg~eg~i~air~are~~iP~LGIC 432 (635)
.+ +||||+.+... ......++.+.+.++|+.-+.
T Consensus 60 ~~~~vdgiIi~~~~~----~~~~~~~~~~~~~~iPvV~~~ 95 (332)
T 2rjo_A 60 KTGGNLVLNVDPNDS----ADARVIVEACSKAGAYVTTIW 95 (332)
T ss_dssp HTTTCEEEEECCSSH----HHHHHHHHHHHHHTCEEEEES
T ss_pred CCCCCCEEEEeCCCH----HHHHHHHHHHHHCCCeEEEEC
Confidence 46 99999976321 122345677777899987653
No 433
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=23.28 E-value=46 Score=33.19 Aligned_cols=35 Identities=11% Similarity=0.124 Sum_probs=25.8
Q ss_pred CCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEeccCC
Q 006689 35 NLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGLDP 75 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~Dp 75 (635)
+.|-|+||||- +.|| .|...|.. +|++|..+-.+|
T Consensus 18 ~~~~vlVtGat-G~iG~~l~~~L~~-----~G~~V~~~~r~~ 53 (347)
T 4id9_A 18 GSHMILVTGSA-GRVGRAVVAALRT-----QGRTVRGFDLRP 53 (347)
T ss_dssp ---CEEEETTT-SHHHHHHHHHHHH-----TTCCEEEEESSC
T ss_pred CCCEEEEECCC-ChHHHHHHHHHHh-----CCCEEEEEeCCC
Confidence 35779999973 7788 88888888 899998875543
No 434
>3pg5_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 3.30A {Corynebacterium diphtheriae}
Probab=23.20 E-value=62 Score=33.49 Aligned_cols=39 Identities=10% Similarity=0.133 Sum_probs=32.6
Q ss_pred CeEEEEccccccchh------hHHHHHHhcCcCCCCceeEEeccCCccccC
Q 006689 36 LQYMFLCLNECACIN------FFSLFLVQNCQYHPNTHFNLFGLDPYLNTD 80 (635)
Q Consensus 36 ~k~i~vtggv~s~lg------s~g~ll~~~~~~~~g~~v~~~K~DpYlN~d 80 (635)
||.|.|+++ -.|.| .||..|.. +|+||-.|-+||.-|.-
T Consensus 1 MkvIav~s~-KGGvGKTT~a~nLA~~LA~-----~G~rVLlID~D~q~~~~ 45 (361)
T 3pg5_A 1 MRTISFFNN-KGGVGKTTLSTNVAHYFAL-----QGKRVLYVDCDPQCNAT 45 (361)
T ss_dssp CEEEEBCCS-SCCHHHHHHHHHHHHHHHH-----TTCCEEEEECCTTCTTH
T ss_pred CeEEEEEcC-CCCCcHHHHHHHHHHHHHh-----CCCcEEEEEcCCCCChh
Confidence 678888866 67888 88899988 99999999999986643
No 435
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=23.15 E-value=63 Score=29.50 Aligned_cols=32 Identities=9% Similarity=0.049 Sum_probs=23.0
Q ss_pred CeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEeccCC
Q 006689 36 LQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGLDP 75 (635)
Q Consensus 36 ~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~Dp 75 (635)
|| |+||||- ++|| .+.+.|. +|++|..+-.++
T Consensus 4 M~-vlVtGas-g~iG~~~~~~l~------~g~~V~~~~r~~ 36 (202)
T 3d7l_A 4 MK-ILLIGAS-GTLGSAVKERLE------KKAEVITAGRHS 36 (202)
T ss_dssp CE-EEEETTT-SHHHHHHHHHHT------TTSEEEEEESSS
T ss_pred cE-EEEEcCC-cHHHHHHHHHHH------CCCeEEEEecCc
Confidence 56 9999984 7888 6666553 489998875544
No 436
>3kke_A LACI family transcriptional regulator; structural genomics, DNA-binding, transcription regulation, PSI-2; 2.20A {Mycobacterium smegmatis str}
Probab=23.11 E-value=2.8e+02 Score=26.81 Aligned_cols=31 Identities=19% Similarity=0.154 Sum_probs=20.5
Q ss_pred cCCCEEEECCCCCCCcchhHHHHHHHHHHcCCCEEEE
Q 006689 395 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 431 (635)
Q Consensus 395 ~~~DGIllPGGfG~rg~eg~i~air~are~~iP~LGI 431 (635)
.++||||+.+...+. . +.++.+.+ ++|+.-+
T Consensus 70 ~~vdgiI~~~~~~~~---~--~~~~~l~~-~iPvV~i 100 (303)
T 3kke_A 70 GRVDGVLLQRREDFD---D--DMLAAVLE-GVPAVTI 100 (303)
T ss_dssp CSSSEEEECCCTTCC---H--HHHHHHHT-TSCEEEE
T ss_pred CCCcEEEEecCCCCc---H--HHHHHHhC-CCCEEEE
Confidence 589999998753321 1 14566667 8998755
No 437
>2hsg_A Glucose-resistance amylase regulator; CCPA, transcriptional regulator, transcription regulator; 2.50A {Bacillus megaterium} SCOP: a.35.1.5 c.93.1.1 PDB: 1rzr_G 2jcg_A 1zvv_A 3oqo_A* 3oqm_A* 3oqn_A*
Probab=23.07 E-value=1.8e+02 Score=28.61 Aligned_cols=32 Identities=19% Similarity=0.254 Sum_probs=20.9
Q ss_pred cCCCEEEECCCCCCCcchhHHHHHHHHHHcCCCEEEEe
Q 006689 395 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGIC 432 (635)
Q Consensus 395 ~~~DGIllPGGfG~rg~eg~i~air~are~~iP~LGIC 432 (635)
.++||||+.+...+ . ..++.+.+.++|+.-+.
T Consensus 115 ~~vdgiI~~~~~~~---~---~~~~~l~~~~iPvV~~~ 146 (332)
T 2hsg_A 115 KQVDGIIFMSGNVT---E---EHVEELKKSPVPVVLAA 146 (332)
T ss_dssp CSSCCEEECCSSCC---H---HHHHHHTTSSSCEEEES
T ss_pred CCCcEEEEecCCCC---H---HHHHHHHhCCCCEEEEc
Confidence 47999999874322 1 34555666789987653
No 438
>3h5o_A Transcriptional regulator GNTR; transcription regulator, GNTR,chromobacterium violaceum, PSI, SGX, DNA-binding; 2.30A {Chromobacterium violaceum}
Probab=23.06 E-value=2.8e+02 Score=27.36 Aligned_cols=31 Identities=19% Similarity=0.349 Sum_probs=20.7
Q ss_pred cCCCEEEECCCCCCCcchhHHHHHHHHHHcCCCEEEE
Q 006689 395 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 431 (635)
Q Consensus 395 ~~~DGIllPGGfG~rg~eg~i~air~are~~iP~LGI 431 (635)
.++||||+.+..... ..++.+.+.++|+.-+
T Consensus 117 ~~vdGiIi~~~~~~~------~~~~~l~~~~iPvV~~ 147 (339)
T 3h5o_A 117 HRPDGVLITGLSHAE------PFERILSQHALPVVYM 147 (339)
T ss_dssp TCCSEEEEECSCCCT------THHHHHHHTTCCEEEE
T ss_pred CCCCEEEEeCCCCCH------HHHHHHhcCCCCEEEE
Confidence 589999998743221 2345566778998755
No 439
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=23.04 E-value=1.6e+02 Score=29.76 Aligned_cols=76 Identities=12% Similarity=0.181 Sum_probs=0.0
Q ss_pred CCCccEEEEEeccCCCcchHHH-HHHHHHHccccceeeeEEEEecCCCCCccccCCChhhhhHHHHhcc-----------
Q 006689 328 LHEPVRIAMVGKYTGLSDAYLS-ILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLK----------- 395 (635)
Q Consensus 328 ~~~~v~IalVGkY~~l~DaY~S-I~~AL~~ag~~~~vkl~i~wi~s~~le~~~~~~~p~~y~~a~~~L~----------- 395 (635)
.+...+|.++| ..-+=.| +.+.|...|+++.+ .|.....+.. +.|.
T Consensus 1 ~~~~~~i~~iG----iGg~Gms~~A~~L~~~G~~V~~------~D~~~~~~~~------------~~L~~~gi~v~~g~~ 58 (326)
T 3eag_A 1 SNAMKHIHIIG----IGGTFMGGLAAIAKEAGFEVSG------CDAKMYPPMS------------TQLEALGIDVYEGFD 58 (326)
T ss_dssp --CCCEEEEES----CCSHHHHHHHHHHHHTTCEEEE------EESSCCTTHH------------HHHHHTTCEEEESCC
T ss_pred CCCCcEEEEEE----ECHHHHHHHHHHHHhCCCEEEE------EcCCCCcHHH------------HHHHhCCCEEECCCC
Q ss_pred -------CCCEEEECCCCCCCcchhHHHHHHHHHHcCCCEEE
Q 006689 396 -------GADGILVPGGFGNRGVQGKILAAKYAREHRIPYLG 430 (635)
Q Consensus 396 -------~~DGIllPGGfG~rg~eg~i~air~are~~iP~LG 430 (635)
++|-|++++| +......++.|+++++|+++
T Consensus 59 ~~~l~~~~~d~vV~Spg-----i~~~~p~~~~a~~~gi~v~~ 95 (326)
T 3eag_A 59 AAQLDEFKADVYVIGNV-----AKRGMDVVEAILNLGLPYIS 95 (326)
T ss_dssp GGGGGSCCCSEEEECTT-----CCTTCHHHHHHHHTTCCEEE
T ss_pred HHHcCCCCCCEEEECCC-----cCCCCHHHHHHHHcCCcEEe
No 440
>1ls1_A Signal recognition particle protein; FFH, SRP54, SRP, GTPase, ultrahigh resolution, protein transport; 1.10A {Thermus aquaticus} SCOP: a.24.13.1 c.37.1.10 PDB: 1jpn_B* 1jpj_A* 1ry1_U* 2j45_A* 1o87_A* 2c04_A* 2j46_A* 1rj9_B* 2c03_A* 2j7p_A* 1okk_A* 2cnw_A* 1ng1_A* 2xkv_A 3ng1_A 1ffh_A 2ng1_A*
Probab=22.91 E-value=3e+02 Score=27.50 Aligned_cols=36 Identities=14% Similarity=0.049 Sum_probs=29.8
Q ss_pred CCeEEEEccccccchh------hHHHHHHhcCcCCCCceeEEeccCCcc
Q 006689 35 NLQYMFLCLNECACIN------FFSLFLVQNCQYHPNTHFNLFGLDPYL 77 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg------s~g~ll~~~~~~~~g~~v~~~K~DpYl 77 (635)
+.+.|.++| .+|.| .|+.+++. .|.+|..+-.|++-
T Consensus 97 ~~~~i~i~g--~~G~GKTT~~~~la~~~~~-----~~~~v~l~~~d~~~ 138 (295)
T 1ls1_A 97 DRNLWFLVG--LQGSGKTTTAAKLALYYKG-----KGRRPLLVAADTQR 138 (295)
T ss_dssp SSEEEEEEC--CTTTTHHHHHHHHHHHHHH-----TTCCEEEEECCSSC
T ss_pred CCeEEEEEC--CCCCCHHHHHHHHHHHHHH-----cCCeEEEecCCccc
Confidence 467888885 48999 78888888 89999999998874
No 441
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=22.60 E-value=51 Score=32.20 Aligned_cols=34 Identities=6% Similarity=0.060 Sum_probs=25.0
Q ss_pred CeEEEEccccccchh-hHHHHHHhcCcCCCC-ceeEEeccCC
Q 006689 36 LQYMFLCLNECACIN-FFSLFLVQNCQYHPN-THFNLFGLDP 75 (635)
Q Consensus 36 ~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g-~~v~~~K~Dp 75 (635)
+|-|+||||- +.+| .+.+.|.. +| ++|..+--+|
T Consensus 5 ~~~ilVtGat-G~iG~~l~~~L~~-----~g~~~V~~~~R~~ 40 (299)
T 2wm3_A 5 KKLVVVFGGT-GAQGGSVARTLLE-----DGTFKVRVVTRNP 40 (299)
T ss_dssp CCEEEEETTT-SHHHHHHHHHHHH-----HCSSEEEEEESCT
T ss_pred CCEEEEECCC-chHHHHHHHHHHh-----cCCceEEEEEcCC
Confidence 4679999974 6788 77777766 67 8888765443
No 442
>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*
Probab=22.59 E-value=61 Score=32.19 Aligned_cols=34 Identities=12% Similarity=0.121 Sum_probs=24.9
Q ss_pred CeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEeccCC
Q 006689 36 LQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGLDP 75 (635)
Q Consensus 36 ~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~Dp 75 (635)
.|-|+|||| -+.|| .|.+.|.+ +|++|...-.||
T Consensus 5 ~~~vlVTGa-tGfIG~~l~~~L~~-----~G~~V~~~~r~~ 39 (337)
T 2c29_D 5 SETVCVTGA-SGFIGSWLVMRLLE-----RGYTVRATVRDP 39 (337)
T ss_dssp -CEEEETTT-TSHHHHHHHHHHHH-----TTCEEEEEESCT
T ss_pred CCEEEEECC-chHHHHHHHHHHHH-----CCCEEEEEECCc
Confidence 467999996 36788 77777778 899998654443
No 443
>1ihu_A Arsenical pump-driving ATPase; aluminum fluoride, ADP, ARSA ATPase, ATP binding site, hydro; HET: ADP; 2.15A {Escherichia coli} SCOP: c.37.1.10 c.37.1.10 PDB: 1f48_A* 1ii0_A* 1ii9_A*
Probab=22.56 E-value=62 Score=35.67 Aligned_cols=37 Identities=16% Similarity=0.203 Sum_probs=30.6
Q ss_pred CCCCeEEEEccccccchh------hHHHHHHhcCcCCCCceeEEeccCCc
Q 006689 33 PLNLQYMFLCLNECACIN------FFSLFLVQNCQYHPNTHFNLFGLDPY 76 (635)
Q Consensus 33 ~~~~k~i~vtggv~s~lg------s~g~ll~~~~~~~~g~~v~~~K~DpY 76 (635)
+..+|++|++|- .|.| .++..|.. +|.||-.|-.||-
T Consensus 5 ~~~~~i~~~sgk--GGvGKTT~a~~lA~~lA~-----~G~rVLlvd~D~~ 47 (589)
T 1ihu_A 5 QNIPPYLFFTGK--GGVGKTSISCATAIRLAE-----QGKRVLLVSTDPA 47 (589)
T ss_dssp SSCCSEEEEECS--TTSSHHHHHHHHHHHHHH-----TTCCEEEEECCTT
T ss_pred CCCCEEEEEeCC--CcCHHHHHHHHHHHHHHH-----CCCcEEEEECCCC
Confidence 344788888765 9999 78888888 9999999999983
No 444
>2oyn_A Hypothetical protein MJ0056; structural genomics, unknown function, PSI-2, protein structure initiative; HET: CDP; 1.85A {Methanocaldococcus jannaschii DSM2661} SCOP: b.43.5.2 PDB: 2p3m_A 2vbs_A 2vbt_A* 2vbu_A* 2vbv_A*
Probab=22.51 E-value=30 Score=32.22 Aligned_cols=15 Identities=7% Similarity=0.120 Sum_probs=13.4
Q ss_pred CeEEEEccccccchh
Q 006689 36 LQYMFLCLNECACIN 50 (635)
Q Consensus 36 ~k~i~vtggv~s~lg 50 (635)
.|-|-++|=|+||+|
T Consensus 4 ~~~i~l~G~VvSGlG 18 (146)
T 2oyn_A 4 VKLMIIEGEVVSGLG 18 (146)
T ss_dssp CCEEEEEEEEECCSS
T ss_pred ceEEEEEEEEEcccc
Confidence 577889999999999
No 445
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=22.29 E-value=70 Score=31.14 Aligned_cols=32 Identities=9% Similarity=-0.110 Sum_probs=27.1
Q ss_pred CCeEEEEcccc-ccchh-hHHHHHHhcCcCCCCceeEEe
Q 006689 35 NLQYMFLCLNE-CACIN-FFSLFLVQNCQYHPNTHFNLF 71 (635)
Q Consensus 35 ~~k~i~vtggv-~s~lg-s~g~ll~~~~~~~~g~~v~~~ 71 (635)
+-|-++|||+- -+||| .+++.|-. .|.+|.+.
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~-----~Ga~Vvi~ 38 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQ-----LGAKLVFT 38 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHH-----TTCEEEEE
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHH-----CCCEEEEE
Confidence 45889999975 35999 99999999 99999875
No 446
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=22.28 E-value=48 Score=32.33 Aligned_cols=31 Identities=6% Similarity=-0.079 Sum_probs=22.8
Q ss_pred eEEEEccccccchh-hHHHHHHhcCcCCC--CceeEEecc
Q 006689 37 QYMFLCLNECACIN-FFSLFLVQNCQYHP--NTHFNLFGL 73 (635)
Q Consensus 37 k~i~vtggv~s~lg-s~g~ll~~~~~~~~--g~~v~~~K~ 73 (635)
|-|+||||- +.|| .|.+.|.. + |++|..+-.
T Consensus 3 ~~vlVtGat-G~iG~~l~~~L~~-----~~~g~~V~~~~r 36 (312)
T 2yy7_A 3 PKILIIGAC-GQIGTELTQKLRK-----LYGTENVIASDI 36 (312)
T ss_dssp CCEEEETTT-SHHHHHHHHHHHH-----HHCGGGEEEEES
T ss_pred ceEEEECCc-cHHHHHHHHHHHH-----hCCCCEEEEEcC
Confidence 448999973 6778 77777777 6 888887643
No 447
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=22.25 E-value=59 Score=33.37 Aligned_cols=41 Identities=20% Similarity=0.138 Sum_probs=26.2
Q ss_pred HhccCCCEEEECCCCCCCcchhHHHHHHHHHHcCCCEEEEeh-----hHHHHHHH
Q 006689 392 KLLKGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGICL-----GMQVAVIE 441 (635)
Q Consensus 392 ~~L~~~DGIllPGGfG~rg~eg~i~air~are~~iP~LGICL-----GmQllaie 441 (635)
+.+..+|-+|-.+|. ..+-++...++|.+-|.+ ++|..+-+
T Consensus 248 ~~l~~aDlvI~raG~---------~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~ 293 (365)
T 3s2u_A 248 AAYAWADLVICRAGA---------LTVSELTAAGLPAFLVPLPHAIDDHQTRNAE 293 (365)
T ss_dssp HHHHHCSEEEECCCH---------HHHHHHHHHTCCEEECC-----CCHHHHHHH
T ss_pred hhhccceEEEecCCc---------chHHHHHHhCCCeEEeccCCCCCcHHHHHHH
Confidence 456788988865652 223455567899876654 78887533
No 448
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=22.24 E-value=53 Score=31.85 Aligned_cols=31 Identities=10% Similarity=0.074 Sum_probs=23.9
Q ss_pred EEEccccccchh-hHHHHHHhcCcCCC-CceeEEeccCC
Q 006689 39 MFLCLNECACIN-FFSLFLVQNCQYHP-NTHFNLFGLDP 75 (635)
Q Consensus 39 i~vtggv~s~lg-s~g~ll~~~~~~~~-g~~v~~~K~Dp 75 (635)
|+||||- +.|| .+...|.. + |++|..+--+|
T Consensus 3 ilVtGat-G~iG~~l~~~L~~-----~~g~~V~~~~R~~ 35 (289)
T 3e48_A 3 IMLTGAT-GHLGTHITNQAIA-----NHIDHFHIGVRNV 35 (289)
T ss_dssp EEEETTT-SHHHHHHHHHHHH-----TTCTTEEEEESSG
T ss_pred EEEEcCC-chHHHHHHHHHhh-----CCCCcEEEEECCH
Confidence 8999874 6788 67777777 6 99998876554
No 449
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=22.22 E-value=56 Score=32.61 Aligned_cols=34 Identities=9% Similarity=-0.154 Sum_probs=26.2
Q ss_pred CCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEeccC
Q 006689 35 NLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGLD 74 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~D 74 (635)
++|-|+||||- +.|| .|...|.. +|++|..+-.+
T Consensus 24 ~~~~vlVtGat-G~iG~~l~~~L~~-----~g~~V~~~~r~ 58 (351)
T 3ruf_A 24 SPKTWLITGVA-GFIGSNLLEKLLK-----LNQVVIGLDNF 58 (351)
T ss_dssp SCCEEEEETTT-SHHHHHHHHHHHH-----TTCEEEEEECC
T ss_pred CCCeEEEECCC-cHHHHHHHHHHHH-----CCCEEEEEeCC
Confidence 46789999974 6678 88888888 89998886543
No 450
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=22.13 E-value=60 Score=31.91 Aligned_cols=33 Identities=0% Similarity=-0.100 Sum_probs=25.0
Q ss_pred CeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEeccC
Q 006689 36 LQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGLD 74 (635)
Q Consensus 36 ~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~D 74 (635)
+|-|+|||| -+.|| .|...|.. +|++|..+--+
T Consensus 2 ~~~vlVtGa-tG~iG~~l~~~L~~-----~g~~V~~~~r~ 35 (311)
T 3m2p_A 2 SLKIAVTGG-TGFLGQYVVESIKN-----DGNTPIILTRS 35 (311)
T ss_dssp CCEEEEETT-TSHHHHHHHHHHHH-----TTCEEEEEESC
T ss_pred CCEEEEECC-CcHHHHHHHHHHHh-----CCCEEEEEeCC
Confidence 456999997 46788 78888888 89988776443
No 451
>2vqe_L 30S ribosomal protein S12, 30S ribosomal protein S6; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: i.1.1.1 PDB: 1gix_O* 1hnw_L* 1hnx_L* 1hnz_L* 1hr0_L 1ibk_L* 1ibl_L* 1ibm_L 1j5e_L 1jgo_O* 1jgp_O* 1jgq_O* 1mj1_O* 1ml5_O* 1mvr_O 1n32_L* 1n33_L* 1n34_L 1n36_L 1xmo_L* ...
Probab=21.84 E-value=50 Score=30.30 Aligned_cols=28 Identities=32% Similarity=0.618 Sum_probs=20.9
Q ss_pred hcccCCCCC-CCCcEEEEeeCCcccccCcc
Q 006689 163 AMIPVDGKE-GPVDVCVIELGGTIGDIESM 191 (635)
Q Consensus 163 ~~~pvd~~~-~~~dv~i~EiGGTvGdies~ 191 (635)
|-||-|+.. .+-|+|+|+ ||-|+||-+.
T Consensus 68 AyIPG~GhnlqEhs~VLVr-Ggrv~DlPGV 96 (135)
T 2vqe_L 68 AYIPGEGHNLQEHSVVLIR-GGRVKDLPGV 96 (135)
T ss_dssp EECCSSCCCCCTTCEEEEE-ECCCTTSTTC
T ss_pred EEcCCCCCccCcCCEEEEc-CCCcCCCCCe
Confidence 446666543 577999999 9999997554
No 452
>3c3k_A Alanine racemase; structural genomics, protein structure initiative, NEW YORK research center for structural genomics, nysgxrc; 1.99A {Actinobacillus succinogenes}
Probab=21.75 E-value=2.4e+02 Score=26.89 Aligned_cols=31 Identities=13% Similarity=0.230 Sum_probs=19.7
Q ss_pred cCCCEEEECCCCCCCcchhHHHHHHHHHHcCCCEEEEe
Q 006689 395 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGIC 432 (635)
Q Consensus 395 ~~~DGIllPGGfG~rg~eg~i~air~are~~iP~LGIC 432 (635)
.++||||+.+...+ + ..++.+. .++|+.-+.
T Consensus 63 ~~vdgiI~~~~~~~---~---~~~~~l~-~~iPvV~~~ 93 (285)
T 3c3k_A 63 KMVDGVITMDALSE---L---PELQNII-GAFPWVQCA 93 (285)
T ss_dssp TCCSEEEECCCGGG---H---HHHHHHH-TTSSEEEES
T ss_pred CCCCEEEEeCCCCC---h---HHHHHHh-cCCCEEEEc
Confidence 57999999763211 1 2344555 789987663
No 453
>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*
Probab=21.74 E-value=53 Score=32.85 Aligned_cols=31 Identities=3% Similarity=0.072 Sum_probs=22.3
Q ss_pred CeEEEEccccccchh-hHHHHHHhcCcCCC-CceeEEecc
Q 006689 36 LQYMFLCLNECACIN-FFSLFLVQNCQYHP-NTHFNLFGL 73 (635)
Q Consensus 36 ~k~i~vtggv~s~lg-s~g~ll~~~~~~~~-g~~v~~~K~ 73 (635)
|| |+||||- ++|| .|...|.. + |++|..+-.
T Consensus 1 Mk-vlVTGas-G~iG~~l~~~L~~-----~~g~~V~~~~r 33 (361)
T 1kew_A 1 MK-ILITGGA-GFIGSAVVRHIIK-----NTQDTVVNIDK 33 (361)
T ss_dssp CE-EEEESTT-SHHHHHHHHHHHH-----HCSCEEEEEEC
T ss_pred CE-EEEECCC-chHhHHHHHHHHh-----cCCCeEEEEec
Confidence 45 8999984 7788 67666666 5 788887643
No 454
>3r7f_A Aspartate carbamoyltransferase; aspartate transcarbamoylase, carbamoyl phosphate, transferas catalytic cycle; 2.10A {Bacillus subtilis} PDB: 3r7d_A 3r7l_A* 2at2_A
Probab=21.65 E-value=4e+02 Score=27.37 Aligned_cols=126 Identities=17% Similarity=0.135 Sum_probs=69.1
Q ss_pred hHHHHHHHhhhhcCCCCEEEEeeeeeeeecCCCccccCCccchhhhhhcCCCcccEEEEeeCCCCChhhhccccccCCCC
Q 006689 192 PFIEALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRSTVALDDNVKGKLSQFCHVP 271 (635)
Q Consensus 192 pf~ea~rq~~~~~g~~n~~~ihv~~vp~~~~~~e~KtKptQ~svk~Lrs~Gi~pd~iv~R~~~~l~~~~r~Kislfc~v~ 271 (635)
-|--|++|| | .+++++- .+.+.-.|--+-..++|-|.+.| +|+|++|....- .-+.++-.+.++
T Consensus 53 SFE~A~~~L----G-g~~i~l~------~~~ss~~kgEsl~DTarvLs~~~--~D~iviR~~~~~---~~~~la~~~~vP 116 (304)
T 3r7f_A 53 SFEVAEKKL----G-MNVLNLD------GTSTSVQKGETLYDTIRTLESIG--VDVCVIRHSEDE---YYEELVSQVNIP 116 (304)
T ss_dssp HHHHHHHHT----T-CEEEEEE------TTSTTSCSSSCHHHHHHHHHHHT--CCEEEEECSSTT---CHHHHHHHCSSC
T ss_pred hHHHHHHHC----C-CeEEEEC------cccccCCCCCCHHHHHHHHHHhc--CCEEEEecCChh---HHHHHHHhCCCC
Confidence 466677665 5 3454432 12233335557777888887766 499999987532 333444444443
Q ss_pred CCCeeeeCCCCCcchhhHHHHHhhhHHHHHHhcCCCCCCCccchHHHHHHHHHhcCCCCccEEEEEeccCCCcchHHHHH
Q 006689 272 EQNIITLYDVPNIWHIPLLLRDQKAHEAIFKVLNLQGTTKEPLLKEWTSRAEICDGLHEPVRIAMVGKYTGLSDAYLSIL 351 (635)
Q Consensus 272 ~~~Vi~i~dvdt~y~vpl~LreqG~~~~i~~~l~l~~~~~~~~l~~W~~lv~~~~~~~~~v~IalVGkY~~l~DaY~SI~ 351 (635)
||+.-|-+ .+|=+..|-+-= .|.+++ ..-+.+||++|||-.. ...-.|.+
T Consensus 117 ---VINagdg~-~~HPtQaLaDl~---Ti~e~~----------------------g~l~glkva~vGD~~~-~rva~Sl~ 166 (304)
T 3r7f_A 117 ---ILNAGDGC-GQHPTQSLLDLM---TIYEEF----------------------NTFKGLTVSIHGDIKH-SRVARSNA 166 (304)
T ss_dssp ---EEESCCTT-SCCHHHHHHHHH---HHHHHH----------------------SCCTTCEEEEESCCTT-CHHHHHHH
T ss_pred ---EEeCCCCC-CcCcHHHHHHHH---HHHHHh----------------------CCCCCCEEEEEcCCCC-cchHHHHH
Confidence 66664322 224433332110 011111 1234689999997431 12457888
Q ss_pred HHHHHcccccee
Q 006689 352 KALLHASVDLRK 363 (635)
Q Consensus 352 ~AL~~ag~~~~v 363 (635)
.++...|+++.+
T Consensus 167 ~~~~~~G~~v~~ 178 (304)
T 3r7f_A 167 EVLTRLGARVLF 178 (304)
T ss_dssp HHHHHTTCEEEE
T ss_pred HHHHHcCCEEEE
Confidence 888888877654
No 455
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=21.54 E-value=1.5e+02 Score=24.84 Aligned_cols=60 Identities=13% Similarity=0.171 Sum_probs=34.3
Q ss_pred cccchHhHHHHHhhhhcCCCCCCeeEEcccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCCcccccCcchHHHHHHHh
Q 006689 121 NITTGKIYQSVIDKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIESMPFIEALGQF 200 (635)
Q Consensus 121 nittGkiy~~vi~kEr~g~ylG~tvQviPHit~~i~~~i~~~~~~pvd~~~~~~dv~i~EiGGTvGdies~pf~ea~rq~ 200 (635)
+....+..+..+++. |-.|..... ..+.+..+. ...||++|+++ ..|..+ +|.++++
T Consensus 13 ~~~~~~~l~~~L~~~------g~~v~~~~~----~~~a~~~l~-------~~~~dlvi~d~---~~~~~g---~~~~~~l 69 (142)
T 2qxy_A 13 SRITFLAVKNALEKD------GFNVIWAKN----EQEAFTFLR-------REKIDLVFVDV---FEGEES---LNLIRRI 69 (142)
T ss_dssp CHHHHHHHHHHHGGG------TCEEEEESS----HHHHHHHHT-------TSCCSEEEEEC---TTTHHH---HHHHHHH
T ss_pred CHHHHHHHHHHHHhC------CCEEEEECC----HHHHHHHHh-------ccCCCEEEEeC---CCCCcH---HHHHHHH
Confidence 344556777777652 335554433 334444443 34799999998 455444 4555555
Q ss_pred hhh
Q 006689 201 SYR 203 (635)
Q Consensus 201 ~~~ 203 (635)
+..
T Consensus 70 ~~~ 72 (142)
T 2qxy_A 70 REE 72 (142)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
No 456
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=21.49 E-value=60 Score=31.84 Aligned_cols=31 Identities=13% Similarity=0.041 Sum_probs=23.8
Q ss_pred CCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEe
Q 006689 35 NLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLF 71 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~ 71 (635)
+.|-|+||||- +.|| .|.+.|.. +|++|..+
T Consensus 2 ~~~~ilVtGat-G~iG~~l~~~L~~-----~g~~v~~~ 33 (321)
T 1e6u_A 2 AKQRVFIAGHR-GMVGSAIRRQLEQ-----RGDVELVL 33 (321)
T ss_dssp CCEEEEEETTT-SHHHHHHHHHHTT-----CTTEEEEC
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHh-----CCCeEEEE
Confidence 34569999974 6778 78888888 89888764
No 457
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=21.47 E-value=43 Score=30.53 Aligned_cols=32 Identities=9% Similarity=-0.257 Sum_probs=23.7
Q ss_pred CeEEEEccccccchh-hHHHHHHhcCcCCC-CceeEEeccCC
Q 006689 36 LQYMFLCLNECACIN-FFSLFLVQNCQYHP-NTHFNLFGLDP 75 (635)
Q Consensus 36 ~k~i~vtggv~s~lg-s~g~ll~~~~~~~~-g~~v~~~K~Dp 75 (635)
+|+ +|.| ...+| ++++.|+. . |++|+.+-.||
T Consensus 40 ~~v-~IiG--~G~~G~~~a~~L~~-----~~g~~V~vid~~~ 73 (183)
T 3c85_A 40 AQV-LILG--MGRIGTGAYDELRA-----RYGKISLGIEIRE 73 (183)
T ss_dssp CSE-EEEC--CSHHHHHHHHHHHH-----HHCSCEEEEESCH
T ss_pred CcE-EEEC--CCHHHHHHHHHHHh-----ccCCeEEEEECCH
Confidence 454 4556 36677 88999999 8 99999886665
No 458
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=21.29 E-value=69 Score=33.02 Aligned_cols=36 Identities=8% Similarity=0.108 Sum_probs=30.1
Q ss_pred CCeEEEEccccccchh------hHHHHHHhcCcCCCCceeEEeccCCc
Q 006689 35 NLQYMFLCLNECACIN------FFSLFLVQNCQYHPNTHFNLFGLDPY 76 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg------s~g~ll~~~~~~~~g~~v~~~K~DpY 76 (635)
.+|-|+|++| -.|.| +++..|.. +|+||-.+-.||-
T Consensus 24 ~~~~i~v~sg-KGGvGKTTvA~~LA~~lA~-----~G~rVLlvD~D~~ 65 (349)
T 3ug7_A 24 DGTKYIMFGG-KGGVGKTTMSAATGVYLAE-----KGLKVVIVSTDPA 65 (349)
T ss_dssp CSCEEEEEEC-SSSTTHHHHHHHHHHHHHH-----SSCCEEEEECCTT
T ss_pred CCCEEEEEeC-CCCccHHHHHHHHHHHHHH-----CCCeEEEEeCCCC
Confidence 4677777766 67888 78888988 9999999999984
No 459
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=21.29 E-value=71 Score=32.93 Aligned_cols=89 Identities=17% Similarity=0.101 Sum_probs=45.1
Q ss_pred ccEEEEEeccCCCcchHHHHHHHHHHccccceeeeEEEEecCCCCCcc---ccC-CChhhhhHHHHhcc--CCCEEEECC
Q 006689 331 PVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDA---TEK-ENPDAYKAAWKLLK--GADGILVPG 404 (635)
Q Consensus 331 ~v~IalVGkY~~l~DaY~SI~~AL~~ag~~~~vkl~i~wi~s~~le~~---~~~-~~p~~y~~a~~~L~--~~DGIllPG 404 (635)
++|||||| .+.. .-..+..+|.+.++++... + + .+.+.. ... ..+..|....+.+. ++|.|+|.-
T Consensus 26 ~irvgiiG-~G~~--~~~~~~~~~~~~~~~lvav----~-d-~~~~~a~~~a~~~~~~~~~~~~~~ll~~~~vD~V~I~t 96 (361)
T 3u3x_A 26 ELRFAAVG-LNHN--HIYGQVNCLLRAGARLAGF----H-E-KDDALAAEFSAVYADARRIATAEEILEDENIGLIVSAA 96 (361)
T ss_dssp CCEEEEEC-CCST--THHHHHHHHHHTTCEEEEE----E-C-SCHHHHHHHHHHSSSCCEESCHHHHHTCTTCCEEEECC
T ss_pred CcEEEEEC-cCHH--HHHHHHHHhhcCCcEEEEE----E-c-CCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeC
Confidence 58999998 5533 2234566676666554332 1 1 111100 000 01122444445554 489999987
Q ss_pred CC-------------CC------C---cchhHHHHHHHHHHcCCCE
Q 006689 405 GF-------------GN------R---GVQGKILAAKYAREHRIPY 428 (635)
Q Consensus 405 Gf-------------G~------r---g~eg~i~air~are~~iP~ 428 (635)
-. |. | ..+...+.++.|+++++++
T Consensus 97 p~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~l 142 (361)
T 3u3x_A 97 VSSERAELAIRAMQHGKDVLVDKPGMTSFDQLAKLRRVQAETGRIF 142 (361)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEESCSCSSHHHHHHHHHHHHTTCCCE
T ss_pred ChHHHHHHHHHHHHCCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEE
Confidence 42 21 1 2234555666777777763
No 460
>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}
Probab=21.22 E-value=66 Score=35.96 Aligned_cols=32 Identities=6% Similarity=0.130 Sum_probs=27.7
Q ss_pred CCCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEe
Q 006689 34 LNLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLF 71 (635)
Q Consensus 34 ~~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~ 71 (635)
+..|.++||||- |||| .+++.|-. +|.+|.+.
T Consensus 6 l~gkvalVTGas-~GIG~a~A~~la~-----~Ga~Vv~~ 38 (604)
T 2et6_A 6 FKDKVVIITGAG-GGLGKYYSLEFAK-----LGAKVVVN 38 (604)
T ss_dssp CTTCEEEETTTT-SHHHHHHHHHHHH-----TTCEEEEE
T ss_pred CCCCEEEEeCCC-cHHHHHHHHHHHH-----cCCEEEEE
Confidence 345899999985 9999 99999999 99999875
No 461
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=21.16 E-value=66 Score=31.41 Aligned_cols=33 Identities=3% Similarity=-0.154 Sum_probs=25.1
Q ss_pred CeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEeccC
Q 006689 36 LQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGLD 74 (635)
Q Consensus 36 ~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~D 74 (635)
+|-|+||||- +.+| ++.+.|.. +|++|..+--+
T Consensus 4 ~~~ilVtGat-G~iG~~l~~~L~~-----~g~~V~~~~R~ 37 (313)
T 1qyd_A 4 KSRVLIVGGT-GYIGKRIVNASIS-----LGHPTYVLFRP 37 (313)
T ss_dssp CCCEEEESTT-STTHHHHHHHHHH-----TTCCEEEECCS
T ss_pred CCEEEEEcCC-cHHHHHHHHHHHh-----CCCcEEEEECC
Confidence 3559999974 6788 88888888 79998876544
No 462
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=21.16 E-value=61 Score=32.50 Aligned_cols=34 Identities=15% Similarity=0.221 Sum_probs=26.2
Q ss_pred CCeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEeccC
Q 006689 35 NLQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGLD 74 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~D 74 (635)
+.|-|+|||| -+.|| .|.+.|.. +|++|..+-.+
T Consensus 8 ~~~~vlVtGa-tG~iG~~l~~~L~~-----~g~~V~~~~r~ 42 (357)
T 1rkx_A 8 QGKRVFVTGH-TGFKGGWLSLWLQT-----MGATVKGYSLT 42 (357)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHH-----TTCEEEEEESS
T ss_pred CCCEEEEECC-CchHHHHHHHHHHh-----CCCeEEEEeCC
Confidence 3466999997 47788 88888888 89999886544
No 463
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=20.95 E-value=61 Score=31.40 Aligned_cols=32 Identities=6% Similarity=-0.086 Sum_probs=26.0
Q ss_pred CeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEecc
Q 006689 36 LQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGL 73 (635)
Q Consensus 36 ~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~ 73 (635)
-|-|+||||- +.|| .+.+.|.. +|++|..+-.
T Consensus 12 ~~~vlVtGat-G~iG~~l~~~L~~-----~g~~V~~~~r 44 (292)
T 1vl0_A 12 HMKILITGAN-GQLGREIQKQLKG-----KNVEVIPTDV 44 (292)
T ss_dssp CEEEEEESTT-SHHHHHHHHHHTT-----SSEEEEEECT
T ss_pred cceEEEECCC-ChHHHHHHHHHHh-----CCCeEEeccC
Confidence 4789999985 7788 88888888 8999988643
No 464
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=20.95 E-value=57 Score=33.16 Aligned_cols=34 Identities=12% Similarity=0.217 Sum_probs=24.7
Q ss_pred CCeEEEEccccccchh-hHHHHHHhcCcCCC-Cc-eeEEeccC
Q 006689 35 NLQYMFLCLNECACIN-FFSLFLVQNCQYHP-NT-HFNLFGLD 74 (635)
Q Consensus 35 ~~k~i~vtggv~s~lg-s~g~ll~~~~~~~~-g~-~v~~~K~D 74 (635)
+.|-|+||||- ++|| .+.+.|.. + |+ +|..+-.|
T Consensus 20 ~~k~vlVTGat-G~iG~~l~~~L~~-----~~g~~~V~~~~r~ 56 (344)
T 2gn4_A 20 DNQTILITGGT-GSFGKCFVRKVLD-----TTNAKKIIVYSRD 56 (344)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHH-----HCCCSEEEEEESC
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHh-----hCCCCEEEEEECC
Confidence 45789999984 7788 77777777 6 76 77765444
No 465
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=20.74 E-value=77 Score=31.54 Aligned_cols=32 Identities=3% Similarity=0.071 Sum_probs=24.9
Q ss_pred CeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEecc
Q 006689 36 LQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGL 73 (635)
Q Consensus 36 ~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~ 73 (635)
.|-|+||||- ++|| .|.+.|.. +|++|..+-.
T Consensus 20 ~~~vlVTGas-G~iG~~l~~~L~~-----~g~~V~~~~r 52 (330)
T 2pzm_A 20 HMRILITGGA-GCLGSNLIEHWLP-----QGHEILVIDN 52 (330)
T ss_dssp CCEEEEETTT-SHHHHHHHHHHGG-----GTCEEEEEEC
T ss_pred CCEEEEECCC-CHHHHHHHHHHHH-----CCCEEEEEEC
Confidence 3569999974 7788 88888888 8999887643
No 466
>1yzf_A Lipase/acylhydrolase; structural GENO PSI, protein structure initiative, midwest center for struc genomics, MCSG; 1.90A {Enterococcus faecalis} SCOP: c.23.10.5
Probab=20.69 E-value=91 Score=27.57 Aligned_cols=32 Identities=28% Similarity=0.354 Sum_probs=22.1
Q ss_pred CCCcEEEEeeCCcccccC------cchHHHHHHHhhhhcC
Q 006689 172 GPVDVCVIELGGTIGDIE------SMPFIEALGQFSYRVG 205 (635)
Q Consensus 172 ~~~dv~i~EiGGTvGdie------s~pf~ea~rq~~~~~g 205 (635)
.+||+++|.+|+ .|+- ..-|.+.++++-.++.
T Consensus 66 ~~pd~vvi~~G~--ND~~~~~~~~~~~~~~~l~~~i~~~~ 103 (195)
T 1yzf_A 66 EKPDEVVIFFGA--NDASLDRNITVATFRENLETMIHEIG 103 (195)
T ss_dssp GCCSEEEEECCT--TTTCTTSCCCHHHHHHHHHHHHHHHC
T ss_pred cCCCEEEEEeec--cccCccCCCCHHHHHHHHHHHHHHhc
Confidence 579999999996 6765 1235666666666654
No 467
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=20.64 E-value=70 Score=31.51 Aligned_cols=34 Identities=6% Similarity=-0.054 Sum_probs=26.0
Q ss_pred CeEEEEccccccchh-hHHHHHHhcCcCCCCceeEEeccCC
Q 006689 36 LQYMFLCLNECACIN-FFSLFLVQNCQYHPNTHFNLFGLDP 75 (635)
Q Consensus 36 ~k~i~vtggv~s~lg-s~g~ll~~~~~~~~g~~v~~~K~Dp 75 (635)
+|-|+||||- +.+| ++.+.|.. +|++|..+--+|
T Consensus 11 ~~~ilVtGat-G~iG~~l~~~L~~-----~g~~V~~l~R~~ 45 (318)
T 2r6j_A 11 KSKILIFGGT-GYIGNHMVKGSLK-----LGHPTYVFTRPN 45 (318)
T ss_dssp CCCEEEETTT-STTHHHHHHHHHH-----TTCCEEEEECTT
T ss_pred CCeEEEECCC-chHHHHHHHHHHH-----CCCcEEEEECCC
Confidence 4569999974 6788 88888888 899988865443
No 468
>1di6_A MOGA, molybdenum cofactor biosynthetic enzyme; MOCO, MOCO biosynthesis, gephyrin function; 1.45A {Escherichia coli} SCOP: c.57.1.1 PDB: 1di7_A
Probab=20.56 E-value=1.2e+02 Score=29.16 Aligned_cols=32 Identities=19% Similarity=0.213 Sum_probs=20.6
Q ss_pred CCCEEEECCCCCCCcchhHHHHHHHHHHcCCC
Q 006689 396 GADGILVPGGFGNRGVQGKILAAKYAREHRIP 427 (635)
Q Consensus 396 ~~DGIllPGGfG~rg~eg~i~air~are~~iP 427 (635)
++|-||.+||-|--..+-..++++.+.+..+|
T Consensus 66 ~~DlVitTGGtg~g~~D~T~ea~~~~~~~~l~ 97 (195)
T 1di6_A 66 SCHLVLTTGGTGPARRDVTPDATLAVADREMP 97 (195)
T ss_dssp CCSEEEEESCCSSSTTCCHHHHHHHTCSEECH
T ss_pred CCCEEEECCCCCCCCCccHHHHHHHHhcccCc
Confidence 69999999985543333345666665555555
No 469
>3ilh_A Two component response regulator; NYSGXRC, PSI-II, protein S initiative, structural genomics; 2.59A {Cytophaga hutchinsonii}
Probab=20.55 E-value=2.7e+02 Score=22.98 Aligned_cols=66 Identities=12% Similarity=0.151 Sum_probs=36.7
Q ss_pred cchHhHHHHHhhhhcCCCCCCeeEEcccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCCcccccCcchHHHHHHHh
Q 006689 123 TTGKIYQSVIDKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIESMPFIEALGQF 200 (635)
Q Consensus 123 ttGkiy~~vi~kEr~g~ylG~tvQviPHit~~i~~~i~~~~~~pvd~~~~~~dv~i~EiGGTvGdies~pf~ea~rq~ 200 (635)
..-......+++. |. ...|.......+++ +.+.+... .+..||++|+++. ..|..+..+++.+|+.
T Consensus 20 ~~~~~l~~~l~~~--~~--~~~v~~~~~~~~a~-~~l~~~~~-----~~~~~dlvi~D~~--l~~~~g~~~~~~l~~~ 85 (146)
T 3ilh_A 20 IVNFLNTTIIRMT--HR--VEEIQSVTSGNAAI-NKLNELYA-----AGRWPSIICIDIN--MPGINGWELIDLFKQH 85 (146)
T ss_dssp HHHHHHHHHHHTT--CC--EEEEEEESSHHHHH-HHHHHHHT-----SSCCCSEEEEESS--CSSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc--CC--CeeeeecCCHHHHH-HHHHHhhc-----cCCCCCEEEEcCC--CCCCCHHHHHHHHHHh
Confidence 3445666666542 11 12566666655555 34444321 2467999999985 3455555555555553
No 470
>3lkb_A Probable branched-chain amino acid ABC transporter, amino acid binding protein; branched amino acid, PSI-II, NYSGXRC, structural genomics; 2.40A {Thermus thermophilus}
Probab=20.15 E-value=3.3e+02 Score=27.17 Aligned_cols=91 Identities=11% Similarity=0.020 Sum_probs=48.1
Q ss_pred CCccEEEEEeccCCCcch-----HHHHHHHHHH---ccccceeeeEEEEecCCCCCccccCCChhhhhHHHHhc---cCC
Q 006689 329 HEPVRIAMVGKYTGLSDA-----YLSILKALLH---ASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL---KGA 397 (635)
Q Consensus 329 ~~~v~IalVGkY~~l~Da-----Y~SI~~AL~~---ag~~~~vkl~i~wi~s~~le~~~~~~~p~~y~~a~~~L---~~~ 397 (635)
.++++|+++...+..... ...+.-|++. .|--.+.++++.+.|+.. +|+.-.++.+.| .++
T Consensus 5 ~~~i~IG~~~p~sG~~a~~g~~~~~g~~~a~~~iN~~ggi~G~~i~l~~~D~~~--------~~~~~~~~~~~li~~~~V 76 (392)
T 3lkb_A 5 QQQVTLFWSGAITGPTSDAGAPYGAAVEDYCKWANERKLVPGVVFNCVVRDDQY--------NNANTQRFFEEAVDRFKI 76 (392)
T ss_dssp CEEEEEEEEECSSSTTHHHHHHHHHHHHHHHHHHHHHTSSTTEEEEEEEEECTT--------CHHHHHHHHHHHHHTTCC
T ss_pred CCceEEEEEecccCchhhcChhHHHHHHHHHHHHHhcCCcCCeEeEEEEecCCC--------CHHHHHHHHHHHHhhcCc
Confidence 457899999765422111 1222233333 111124667777776542 333332233333 379
Q ss_pred CEEEECCCCCCCcchhHHHHHHHHHHcCCCEEEEeh
Q 006689 398 DGILVPGGFGNRGVQGKILAAKYAREHRIPYLGICL 433 (635)
Q Consensus 398 DGIllPGGfG~rg~eg~i~air~are~~iP~LGICL 433 (635)
|+||. +++ .....++..+.+.++|++..+.
T Consensus 77 ~~iig---~~s---~~~~~~~~~~~~~~iP~i~~~~ 106 (392)
T 3lkb_A 77 PVFLS---YAT---GANLQLKPLIQELRIPTIPASM 106 (392)
T ss_dssp SCEEE---CCH---HHHHHHHHHHHHHTCCEEESCC
T ss_pred EEEEe---CCc---HHHHHHHHHHHhCCceEEeccc
Confidence 99985 222 2234556677778999998653
No 471
>1m3s_A Hypothetical protein YCKF; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.95A {Bacillus subtilis} SCOP: c.80.1.3 PDB: 1viv_A
Probab=20.15 E-value=3e+02 Score=24.86 Aligned_cols=37 Identities=16% Similarity=0.201 Sum_probs=26.0
Q ss_pred CCCEEEECCCCCCCcchhHHHHHHHHHHcCCCEEEEehh
Q 006689 396 GADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGICLG 434 (635)
Q Consensus 396 ~~DGIllPGGfG~rg~eg~i~air~are~~iP~LGICLG 434 (635)
.=|-+|+--..|. ....+++++.|++++.|+.+|+--
T Consensus 79 ~~d~vI~iS~sG~--t~~~~~~~~~ak~~g~~vi~IT~~ 115 (186)
T 1m3s_A 79 EGDLVIIGSGSGE--TKSLIHTAAKAKSLHGIVAALTIN 115 (186)
T ss_dssp TTCEEEEECSSSC--CHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEEcCCCC--cHHHHHHHHHHHHCCCEEEEEECC
Confidence 3354444333444 356789999999999999999863
No 472
>1ivn_A Thioesterase I; hydrolase, protease; 1.90A {Escherichia coli} SCOP: c.23.10.5 PDB: 1u8u_A* 1j00_A* 1jrl_A 1v2g_A*
Probab=20.05 E-value=83 Score=28.31 Aligned_cols=35 Identities=26% Similarity=0.209 Sum_probs=23.3
Q ss_pred CCcEEEEeeCCcccccCc----chHHHHHHHhhhhcCCCCE
Q 006689 173 PVDVCVIELGGTIGDIES----MPFIEALGQFSYRVGPGNF 209 (635)
Q Consensus 173 ~~dv~i~EiGGTvGdies----~pf~ea~rq~~~~~g~~n~ 209 (635)
+||+|||.+|. .|+-. .-|.++++++-.++...+.
T Consensus 62 ~pd~Vii~~G~--ND~~~~~~~~~~~~~l~~li~~~~~~~~ 100 (190)
T 1ivn_A 62 QPRWVLVELGG--NDGLRGFQPQQTEQTLRQILQDVKAANA 100 (190)
T ss_dssp CCSEEEEECCT--TTTSSSCCHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEEeec--cccccCCCHHHHHHHHHHHHHHHHHcCC
Confidence 58999999985 57632 2377777777666544343
No 473
>3snr_A Extracellular ligand-binding receptor; structural genomics, APC102214, PSI-biology, midwest center structural genomics, MCSG; HET: MSE TYR PHE; 1.49A {Rhodopseudomonas palustris} PDB: 3uk0_A* 3t23_A* 3ukj_A* 4eyo_A* 4eyq_A* 3tx6_A* 4f8j_A* 4fb4_A*
Probab=20.00 E-value=5.1e+02 Score=25.07 Aligned_cols=92 Identities=16% Similarity=0.179 Sum_probs=48.7
Q ss_pred CCccEEEEEeccCCCcchH-HHHHHHHHHccccc-eeeeEEEEecCCCCCccccCCChhhhhHHHHh-c-c-CCCEEEEC
Q 006689 329 HEPVRIAMVGKYTGLSDAY-LSILKALLHASVDL-RKKLVIDWIPACDLEDATEKENPDAYKAAWKL-L-K-GADGILVP 403 (635)
Q Consensus 329 ~~~v~IalVGkY~~l~DaY-~SI~~AL~~ag~~~-~vkl~i~wi~s~~le~~~~~~~p~~y~~a~~~-L-~-~~DGIllP 403 (635)
.++++|+++...+.....+ ..+.++++.+--++ +.++++.+.++.. +|+.-.++.+. + . ++||||.|
T Consensus 5 ~~~i~IG~~~p~sg~~~~~g~~~~~g~~~a~~~i~g~~i~l~~~d~~~--------~~~~~~~~~~~l~~~~~v~~iig~ 76 (362)
T 3snr_A 5 TNEITVGISVTTTGPAAALGIPERNALEFVVKEISGHPIKIIVLDDGG--------DPTAATTNARRFVTESKADVIMGS 76 (362)
T ss_dssp CCCEEEEEEECCSSTTHHHHHHHHHGGGGSCSEETTEEEEEEEEECTT--------CHHHHHHHHHHHHHTSCCSEEEEC
T ss_pred CCCeEEEEEecccCchhhcCHHHHHHHHHHHHHhCCeEEEEEEecCCC--------CHHHHHHHHHHHHhccCceEEEcC
Confidence 3578999996543211112 23455555443332 3456666666432 23222222233 2 3 69999965
Q ss_pred CCCCCCcchhHHHHHHHHHHcCCCEEEEeh
Q 006689 404 GGFGNRGVQGKILAAKYAREHRIPYLGICL 433 (635)
Q Consensus 404 GGfG~rg~eg~i~air~are~~iP~LGICL 433 (635)
.+. .....++..+.+.++|++..+.
T Consensus 77 ~~s-----~~~~~~~~~~~~~~ip~v~~~~ 101 (362)
T 3snr_A 77 SVT-----PPSVAISNVANEAQIPHIALAP 101 (362)
T ss_dssp SSH-----HHHHHHHHHHHHHTCCEEESSC
T ss_pred CCc-----HHHHHHHHHHHHcCccEEEecC
Confidence 421 1233445666778999988753
Done!