Query 006695
Match_columns 635
No_of_seqs 774 out of 4093
Neff 8.9
Searched_HMMs 13730
Date Mon Mar 25 06:29:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006695.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/006695hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2omza2 c.10.2.1 (A:33-416) In 99.9 6.4E-23 4.6E-27 214.7 28.0 321 19-373 41-383 (384)
2 d2omza2 c.10.2.1 (A:33-416) In 99.9 1.9E-22 1.4E-26 211.0 27.3 313 2-349 48-383 (384)
3 d1xkua_ c.10.2.7 (A:) Decorin 99.9 2.9E-22 2.1E-26 203.5 27.2 260 56-351 11-284 (305)
4 d1ogqa_ c.10.2.8 (A:) Polygala 99.9 1.2E-23 8.5E-28 214.7 14.7 244 77-352 50-304 (313)
5 d1ogqa_ c.10.2.8 (A:) Polygala 99.9 6.7E-23 4.8E-27 209.1 12.2 247 56-335 51-308 (313)
6 d1xkua_ c.10.2.7 (A:) Decorin 99.9 2.3E-20 1.7E-24 189.1 28.2 263 24-330 12-284 (305)
7 d1jl5a_ c.10.2.6 (A:) Leucine 99.9 4.3E-19 3.1E-23 182.6 33.3 305 22-365 38-349 (353)
8 d1jl5a_ c.10.2.6 (A:) Leucine 99.8 2.8E-19 2.1E-23 183.9 29.8 291 2-347 42-352 (353)
9 d1ozna_ c.10.2.7 (A:) Reticulo 99.8 1.1E-19 8.1E-24 182.2 19.8 219 59-307 15-237 (284)
10 d1ozna_ c.10.2.7 (A:) Reticulo 99.8 1.4E-19 1E-23 181.4 20.3 204 53-276 30-239 (284)
11 d1p9ag_ c.10.2.7 (G:) von Will 99.8 3.7E-19 2.7E-23 176.6 21.1 97 57-156 12-109 (266)
12 d1p9ag_ c.10.2.7 (G:) von Will 99.8 7.8E-19 5.7E-23 174.2 21.8 130 192-330 78-207 (266)
13 d1h6ua2 c.10.2.1 (A:36-262) In 99.7 1.2E-16 8.4E-21 154.4 15.9 203 60-327 24-226 (227)
14 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.7 4.4E-16 3.2E-20 151.5 16.7 101 57-158 10-114 (242)
15 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.6 4.5E-15 3.3E-19 144.3 19.3 83 80-164 11-95 (242)
16 d1h6ua2 c.10.2.1 (A:36-262) In 99.6 4.6E-15 3.3E-19 142.9 18.3 99 56-158 42-140 (227)
17 d2omxa2 c.10.2.1 (A:37-235) In 99.6 1.1E-14 7.9E-19 137.2 16.7 76 234-323 124-199 (199)
18 d1w8aa_ c.10.2.7 (A:) Slit {Fr 99.6 2.7E-15 2E-19 140.6 11.6 171 194-378 11-185 (192)
19 d2omxa2 c.10.2.1 (A:37-235) In 99.6 8.9E-15 6.5E-19 137.8 14.4 80 75-158 38-117 (199)
20 d1h6ta2 c.10.2.1 (A:31-240) In 99.6 4.7E-15 3.4E-19 141.1 12.2 163 56-247 47-209 (210)
21 d1h6ta2 c.10.2.1 (A:31-240) In 99.6 1.6E-14 1.2E-18 137.3 15.1 166 75-271 44-209 (210)
22 d1z7xw1 c.10.1.1 (W:1-460) Rib 99.5 3.4E-16 2.5E-20 166.2 1.2 107 2-113 6-125 (460)
23 d1w8aa_ c.10.2.7 (A:) Slit {Fr 99.5 9.7E-15 7.1E-19 136.8 10.4 167 174-350 12-181 (192)
24 d2astb2 c.10.1.3 (B:2136-2419) 99.4 2.3E-14 1.7E-18 142.8 6.0 84 75-158 44-132 (284)
25 d1a9na_ c.10.2.4 (A:) Spliceso 99.4 2.4E-13 1.8E-17 123.2 9.0 123 192-324 19-145 (162)
26 d2astb2 c.10.1.3 (B:2136-2419) 99.4 1.1E-13 8.2E-18 137.7 6.6 193 80-272 26-235 (284)
27 d1z7xw1 c.10.1.1 (W:1-460) Rib 99.3 2.9E-14 2.1E-18 151.0 -1.6 344 22-377 2-411 (460)
28 d1dcea3 c.10.2.2 (A:444-567) R 99.3 3.1E-12 2.2E-16 110.2 11.1 105 194-310 1-105 (124)
29 d1a9na_ c.10.2.4 (A:) Spliceso 99.3 1.1E-12 8.2E-17 118.7 6.8 83 75-158 16-98 (162)
30 d1dcea3 c.10.2.2 (A:444-567) R 99.3 2.6E-12 1.9E-16 110.7 8.5 99 2-112 2-102 (124)
31 d2ca6a1 c.10.1.2 (A:2-345) Rna 99.3 1.9E-12 1.3E-16 132.4 6.6 242 76-330 30-314 (344)
32 d1m9la_ c.10.3.1 (A:) Outer ar 99.1 6.5E-13 4.7E-17 124.6 -4.8 129 193-335 25-157 (198)
33 d2ca6a1 c.10.1.2 (A:2-345) Rna 99.1 7.1E-12 5.2E-16 128.0 -0.4 68 91-158 22-104 (344)
34 d2ifga3 c.10.2.7 (A:36-191) Hi 99.0 6.3E-10 4.6E-14 99.5 11.4 88 193-280 10-98 (156)
35 d1m9la_ c.10.3.1 (A:) Outer ar 99.0 4.6E-12 3.4E-16 118.6 -4.9 54 79-133 25-80 (198)
36 d2ifga3 c.10.2.7 (A:36-191) Hi 98.9 2.5E-09 1.8E-13 95.5 11.4 108 213-330 7-115 (156)
37 d1koha1 c.10.2.3 (A:201-362) m 98.0 2.8E-07 2.1E-11 82.3 -0.9 70 257-333 60-130 (162)
38 d1koha1 c.10.2.3 (A:201-362) m 97.8 1E-06 7.3E-11 78.6 -1.0 85 231-324 58-152 (162)
39 d1pgva_ c.10.1.1 (A:) Tropomod 97.4 8E-05 5.8E-09 66.1 6.4 42 234-275 40-85 (167)
40 d1pgva_ c.10.1.1 (A:) Tropomod 97.3 7.1E-05 5.2E-09 66.4 4.6 114 191-306 15-142 (167)
41 d1io0a_ c.10.1.1 (A:) Tropomod 96.5 0.00083 6.1E-08 59.0 4.3 64 212-275 15-87 (166)
42 d1io0a_ c.10.1.1 (A:) Tropomod 96.0 0.0018 1.3E-07 56.8 3.9 111 191-306 17-143 (166)
No 1
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.91 E-value=6.4e-23 Score=214.66 Aligned_cols=321 Identities=16% Similarity=0.182 Sum_probs=209.1
Q ss_pred cCCCCCcEEEeecCCCCCCcccceeeecCCcccCCCccceEeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccccCCC
Q 006695 19 ANMPNLRFLKFYMPEHNGVPIMISKVHLDQGLEYLPNELRYLHWHEYPSKALPFDFEPENLVKLNLPYSKVVQIWEGKKR 98 (635)
Q Consensus 19 ~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~~l~~l~~~L~~L~l~~~~l~~lp~~~~l~~L~~L~L~~n~l~~l~~~~~~ 98 (635)
+.+.+|+.|+++++.++ .+ +++..+++ |++|++++|.++.+|..-.+++|++|++++|.++.++ .+..
T Consensus 41 ~~l~~l~~L~l~~~~I~---------~l-~gl~~L~n-L~~L~Ls~N~l~~l~~l~~L~~L~~L~L~~n~i~~i~-~l~~ 108 (384)
T d2omza2 41 TDLDQVTTLQADRLGIK---------SI-DGVEYLNN-LTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADIT-PLAN 108 (384)
T ss_dssp HHHTTCCEEECCSSCCC---------CC-TTGGGCTT-CCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCCCG-GGTT
T ss_pred HHhCCCCEEECCCCCCC---------Cc-cccccCCC-CCEEeCcCCcCCCCccccCCccccccccccccccccc-cccc
Confidence 34567888888887766 22 45666655 8888888888888876346788888888888887765 3677
Q ss_pred CCCCcEEEccCCCCCCCCCCCCCCCCCCEEeecCCCCCccc-------------------CccccCCCCCCEEeecCCCC
Q 006695 99 AFKLKYVDIHNSQYLIRMPDLSETPNLERTNLKNCINLTCV-------------------PSSVQNFNHLSMLCFEGCKS 159 (635)
Q Consensus 99 l~~L~~L~Ls~n~~~~~~p~l~~l~~L~~L~L~~n~~l~~~-------------------~~~i~~l~~L~~L~L~~~~~ 159 (635)
+++|+.|+++++.... ++.......+..+....+...... ...+...+.........+.
T Consensus 109 l~~L~~L~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 186 (384)
T d2omza2 109 LTNLTGLTLFNNQITD-IDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNK- 186 (384)
T ss_dssp CTTCCEEECCSSCCCC-CGGGTTCTTCSEEEEEEEEECCCGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSC-
T ss_pred cccccccccccccccc-cccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccc-
Confidence 8888888887776433 333344455555554443211110 0112222233333332221
Q ss_pred CCccCCCCCCCCCcEEecCCCCCCCccC-cccCCcceEEeccccccccCcccccCCCccEEEeecccccccchhcccCCC
Q 006695 160 LRSFPSNLHFMSPIKIDFSSCFNLTEFP-QISGNITDLILSETAIQEVPSSIECLTNLEKLYINRCMRLKRLSTSICKLK 238 (635)
Q Consensus 160 l~~lp~~~~l~~L~~L~l~~c~~l~~~p-~~~~~L~~L~L~~n~i~~lp~~~~~l~~L~~L~L~~n~~~~~lp~~~~~l~ 238 (635)
.........+++++.++++++..-...| ....+|++|++++|.++.++ .+..+++|+.|++++|.+.+..+ +..++
T Consensus 187 ~~~~~~~~~l~~~~~l~l~~n~i~~~~~~~~~~~L~~L~l~~n~l~~~~-~l~~l~~L~~L~l~~n~l~~~~~--~~~~~ 263 (384)
T d2omza2 187 VSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG-TLASLTNLTDLDLANNQISNLAP--LSGLT 263 (384)
T ss_dssp CCCCGGGGGCTTCSEEECCSSCCCCCGGGGGCTTCCEEECCSSCCCCCG-GGGGCTTCSEEECCSSCCCCCGG--GTTCT
T ss_pred cccccccccccccceeeccCCccCCCCcccccCCCCEEECCCCCCCCcc-hhhcccccchhccccCccCCCCc--ccccc
Confidence 1111222256777788877754332222 22367888888888888765 56778888888888887665433 66788
Q ss_pred CCcEEecCCCCCCCcchhhhcCCCCCCEEEecCCCccccCchhcccccchhhccCCCCccEEEcCCCCCCcccccccCCC
Q 006695 239 SLHVLVLDDCSKLERFPEILEKMESVKCISLERTAITELPSSFANLEGLKDLYIGGSSLRQLNLSRNDSESLPASITQLS 318 (635)
Q Consensus 239 ~L~~L~Ls~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~lp~~~~~l~~L~~l~~~~~~L~~L~Ls~n~~~~lp~~l~~l~ 318 (635)
+|++|+++++.+.+.. .+..++.++.+.+.+|.++.++. +..+++++.|++++|+++.++ .+..++
T Consensus 264 ~L~~L~l~~~~l~~~~--~~~~~~~l~~l~~~~n~l~~~~~-----------~~~~~~l~~L~ls~n~l~~l~-~l~~l~ 329 (384)
T d2omza2 264 KLTELKLGANQISNIS--PLAGLTALTNLELNENQLEDISP-----------ISNLKNLTYLTLYFNNISDIS-PVSSLT 329 (384)
T ss_dssp TCSEEECCSSCCCCCG--GGTTCTTCSEEECCSSCCSCCGG-----------GGGCTTCSEEECCSSCCSCCG-GGGGCT
T ss_pred cCCEeeccCcccCCCC--ccccccccccccccccccccccc-----------cchhcccCeEECCCCCCCCCc-ccccCC
Confidence 8888888887765533 36677888888888888776543 244578888999998888876 378888
Q ss_pred CccEEeccCCCCCCcCCC--CCCccceecccccccccccCccccCccccchhhhhhh
Q 006695 319 QLRSLHLKDCSMLSSLPE--LPQSLELLDAENCKQLQFIPEILSGLEEVDASVLEKA 373 (635)
Q Consensus 319 ~L~~L~L~~n~~l~~lp~--l~~sL~~L~l~~c~~l~~~~~~~~~L~~L~~l~L~~n 373 (635)
+|++|++++|++ +.++. .+++|++|++++|+... ++ .+.++++|+.|+|++|
T Consensus 330 ~L~~L~L~~n~l-~~l~~l~~l~~L~~L~l~~N~l~~-l~-~l~~l~~L~~L~L~~N 383 (384)
T d2omza2 330 KLQRLFFANNKV-SDVSSLANLTNINWLSAGHNQISD-LT-PLANLTRITQLGLNDQ 383 (384)
T ss_dssp TCCEEECCSSCC-CCCGGGGGCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEECCCE
T ss_pred CCCEEECCCCCC-CCChhHcCCCCCCEEECCCCcCCC-Ch-hhccCCCCCEeeCCCC
Confidence 899999988864 34543 24788899998886543 33 2778888888887766
No 2
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.90 E-value=1.9e-22 Score=211.05 Aligned_cols=313 Identities=15% Similarity=0.159 Sum_probs=236.5
Q ss_pred eeecCCCcccccChhhhcCCCCCcEEEeecCCCCCCcccceeeecCCcccCCCccceEeecCCCCCCCCCCCCCCCCceE
Q 006695 2 FLDLSKITSIHLSPQAFANMPNLRFLKFYMPEHNGVPIMISKVHLDQGLEYLPNELRYLHWHEYPSKALPFDFEPENLVK 81 (635)
Q Consensus 2 ~LdLs~n~~~~l~~~~f~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~~l~~l~~~L~~L~l~~~~l~~lp~~~~l~~L~~ 81 (635)
.|+++++.+..+ +.++.+++|++|++++|++++++ .+..+++ |++|++++|++..++....+++|+.
T Consensus 48 ~L~l~~~~I~~l--~gl~~L~nL~~L~Ls~N~l~~l~----------~l~~L~~-L~~L~L~~n~i~~i~~l~~l~~L~~ 114 (384)
T d2omza2 48 TLQADRLGIKSI--DGVEYLNNLTQINFSNNQLTDIT----------PLKNLTK-LVDILMNNNQIADITPLANLTNLTG 114 (384)
T ss_dssp EEECCSSCCCCC--TTGGGCTTCCEEECCSSCCCCCG----------GGTTCTT-CCEEECCSSCCCCCGGGTTCTTCCE
T ss_pred EEECCCCCCCCc--cccccCCCCCEEeCcCCcCCCCc----------cccCCcc-ccccccccccccccccccccccccc
Confidence 589999998887 45889999999999999998432 2666665 9999999999999887668999999
Q ss_pred EEcCCCCCccccccCCCCCCCcEEEccCCCCCCCC--------------------CCCCCCCCCCEEeecCCCCCcccCc
Q 006695 82 LNLPYSKVVQIWEGKKRAFKLKYVDIHNSQYLIRM--------------------PDLSETPNLERTNLKNCINLTCVPS 141 (635)
Q Consensus 82 L~L~~n~l~~l~~~~~~l~~L~~L~Ls~n~~~~~~--------------------p~l~~l~~L~~L~L~~n~~l~~~~~ 141 (635)
|+++++.++.++.. .....+..+....+.+.... ..+...+.........+. .....
T Consensus 115 L~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 191 (384)
T d2omza2 115 LTLFNNQITDIDPL-KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNK--VSDIS 191 (384)
T ss_dssp EECCSSCCCCCGGG-TTCTTCSEEEEEEEEECCCGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSC--CCCCG
T ss_pred cccccccccccccc-cccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccc--ccccc
Confidence 99999999877543 34455566655554422111 112233333444443332 23345
Q ss_pred cccCCCCCCEEeecCCCCCCccCCCCCCCCCcEEecCCCCCCCccCc--ccCCcceEEeccccccccCcccccCCCccEE
Q 006695 142 SVQNFNHLSMLCFEGCKSLRSFPSNLHFMSPIKIDFSSCFNLTEFPQ--ISGNITDLILSETAIQEVPSSIECLTNLEKL 219 (635)
Q Consensus 142 ~i~~l~~L~~L~L~~~~~l~~lp~~~~l~~L~~L~l~~c~~l~~~p~--~~~~L~~L~L~~n~i~~lp~~~~~l~~L~~L 219 (635)
....+++++.+++++|.. ..++.....++|+.|++++| .++.++. .+++|+.|++++|.++.++. ++.+++|++|
T Consensus 192 ~~~~l~~~~~l~l~~n~i-~~~~~~~~~~~L~~L~l~~n-~l~~~~~l~~l~~L~~L~l~~n~l~~~~~-~~~~~~L~~L 268 (384)
T d2omza2 192 VLAKLTNLESLIATNNQI-SDITPLGILTNLDELSLNGN-QLKDIGTLASLTNLTDLDLANNQISNLAP-LSGLTKLTEL 268 (384)
T ss_dssp GGGGCTTCSEEECCSSCC-CCCGGGGGCTTCCEEECCSS-CCCCCGGGGGCTTCSEEECCSSCCCCCGG-GTTCTTCSEE
T ss_pred ccccccccceeeccCCcc-CCCCcccccCCCCEEECCCC-CCCCcchhhcccccchhccccCccCCCCc-ccccccCCEe
Confidence 677889999999988753 44444456788999999987 4555543 34789999999999998864 7889999999
Q ss_pred EeecccccccchhcccCCCCCcEEecCCCCCCCcchhhhcCCCCCCEEEecCCCccccCchhcccccchhhccCCCCccE
Q 006695 220 YINRCMRLKRLSTSICKLKSLHVLVLDDCSKLERFPEILEKMESVKCISLERTAITELPSSFANLEGLKDLYIGGSSLRQ 299 (635)
Q Consensus 220 ~L~~n~~~~~lp~~~~~l~~L~~L~Ls~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~lp~~~~~l~~L~~l~~~~~~L~~ 299 (635)
++++|.+.+.. .+..++.++.+++++|.+.+ ...+..+++++.|++++|++++++. + ..+++|++
T Consensus 269 ~l~~~~l~~~~--~~~~~~~l~~l~~~~n~l~~--~~~~~~~~~l~~L~ls~n~l~~l~~-l----------~~l~~L~~ 333 (384)
T d2omza2 269 KLGANQISNIS--PLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDISP-V----------SSLTKLQR 333 (384)
T ss_dssp ECCSSCCCCCG--GGTTCTTCSEEECCSSCCSC--CGGGGGCTTCSEEECCSSCCSCCGG-G----------GGCTTCCE
T ss_pred eccCcccCCCC--cccccccccccccccccccc--ccccchhcccCeEECCCCCCCCCcc-c----------ccCCCCCE
Confidence 99998876543 36788999999999988765 2357889999999999999998753 3 44689999
Q ss_pred EEcCCCCCCcccccccCCCCccEEeccCCCCCCcCC-CCCCccceeccccc
Q 006695 300 LNLSRNDSESLPASITQLSQLRSLHLKDCSMLSSLP-ELPQSLELLDAENC 349 (635)
Q Consensus 300 L~Ls~n~~~~lp~~l~~l~~L~~L~L~~n~~l~~lp-~l~~sL~~L~l~~c 349 (635)
|++++|+++.++ .++++++|++|++++|++.+..| ..+++|+.|++++|
T Consensus 334 L~L~~n~l~~l~-~l~~l~~L~~L~l~~N~l~~l~~l~~l~~L~~L~L~~N 383 (384)
T d2omza2 334 LFFANNKVSDVS-SLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQ 383 (384)
T ss_dssp EECCSSCCCCCG-GGGGCTTCCEEECCSSCCCBCGGGTTCTTCSEEECCCE
T ss_pred EECCCCCCCCCh-hHcCCCCCCEEECCCCcCCCChhhccCCCCCEeeCCCC
Confidence 999999999887 68999999999999987665433 23579999999987
No 3
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.90 E-value=2.9e-22 Score=203.45 Aligned_cols=260 Identities=16% Similarity=0.165 Sum_probs=152.4
Q ss_pred cceEeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc-cCCCCCCCcEEEccCCCCCCCCCC-CCCCCCCCEEeecCC
Q 006695 56 ELRYLHWHEYPSKALPFDFEPENLVKLNLPYSKVVQIWE-GKKRAFKLKYVDIHNSQYLIRMPD-LSETPNLERTNLKNC 133 (635)
Q Consensus 56 ~L~~L~l~~~~l~~lp~~~~l~~L~~L~L~~n~l~~l~~-~~~~l~~L~~L~Ls~n~~~~~~p~-l~~l~~L~~L~L~~n 133 (635)
..+.+++++..++++|..+ ++++++|+|++|+|+++++ .+.++++|++|++++|.+....|+ |.++++|+.|++++|
T Consensus 11 ~~~~~~C~~~~L~~lP~~l-~~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~~n 89 (305)
T d1xkua_ 11 HLRVVQCSDLGLEKVPKDL-PPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKN 89 (305)
T ss_dssp ETTEEECTTSCCCSCCCSC-CTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSS
T ss_pred cCCEEEecCCCCCccCCCC-CCCCCEEECcCCcCCCcChhHhhccccccccccccccccccchhhhhCCCccCEecccCC
Confidence 4778888888899999876 3689999999999999986 578889999999999987766664 888899999999888
Q ss_pred CCCcccCccccCCCCCCEEeecCCCCCCccCCCC--CCCCCcEEecCCCCCCCccCcccCCcceEEeccccccccCcccc
Q 006695 134 INLTCVPSSVQNFNHLSMLCFEGCKSLRSFPSNL--HFMSPIKIDFSSCFNLTEFPQISGNITDLILSETAIQEVPSSIE 211 (635)
Q Consensus 134 ~~l~~~~~~i~~l~~L~~L~L~~~~~l~~lp~~~--~l~~L~~L~l~~c~~l~~~p~~~~~L~~L~L~~n~i~~lp~~~~ 211 (635)
. +..+|..+ ...++.|.+.+|.. ..++... ....+..++...+...... ..+..+.
T Consensus 90 ~-l~~l~~~~--~~~l~~L~~~~n~l-~~l~~~~~~~~~~~~~l~~~~n~~~~~~------------------~~~~~~~ 147 (305)
T d1xkua_ 90 Q-LKELPEKM--PKTLQELRVHENEI-TKVRKSVFNGLNQMIVVELGTNPLKSSG------------------IENGAFQ 147 (305)
T ss_dssp C-CSBCCSSC--CTTCCEEECCSSCC-CBBCHHHHTTCTTCCEEECCSSCCCGGG------------------BCTTGGG
T ss_pred c-cCcCccch--hhhhhhhhccccch-hhhhhhhhhccccccccccccccccccC------------------CCccccc
Confidence 4 44555433 45778888777543 2332211 3333444444433211110 1122344
Q ss_pred cCCCccEEEeecccccccchhcccCCCCCcEEecCCCCCCCcchhhhcCCCCCCEEEecCCCccccCchhcccccchhhc
Q 006695 212 CLTNLEKLYINRCMRLKRLSTSICKLKSLHVLVLDDCSKLERFPEILEKMESVKCISLERTAITELPSSFANLEGLKDLY 291 (635)
Q Consensus 212 ~l~~L~~L~L~~n~~~~~lp~~~~~l~~L~~L~Ls~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~lp~~~~~l~~L~~l~ 291 (635)
.+++|+.+++++|.+.. +|.. .+++|+.|++++|......+..+..++.++.|++++|.++.++.. .+
T Consensus 148 ~l~~L~~l~l~~n~l~~-l~~~--~~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~s~n~l~~~~~~---------~~ 215 (305)
T d1xkua_ 148 GMKKLSYIRIADTNITT-IPQG--LPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNG---------SL 215 (305)
T ss_dssp GCTTCCEEECCSSCCCS-CCSS--CCTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTT---------TG
T ss_pred cccccCccccccCCccc-cCcc--cCCccCEEECCCCcCCCCChhHhhccccccccccccccccccccc---------cc
Confidence 44555555555554332 2221 234555555555555555555555555555555555555554321 12
Q ss_pred cCCCCccEEEcCCCCCCcccccccCCCCccEEeccCCCCCCcCCC----------CCCccceeccccccc
Q 006695 292 IGGSSLRQLNLSRNDSESLPASITQLSQLRSLHLKDCSMLSSLPE----------LPQSLELLDAENCKQ 351 (635)
Q Consensus 292 ~~~~~L~~L~Ls~n~~~~lp~~l~~l~~L~~L~L~~n~~l~~lp~----------l~~sL~~L~l~~c~~ 351 (635)
.++++|++|+|++|.++++|.++..+++|++|+|++|++ +.++. .+.+|+.|++++|+.
T Consensus 216 ~~l~~L~~L~L~~N~L~~lp~~l~~l~~L~~L~Ls~N~i-~~i~~~~f~~~~~~~~~~~L~~L~L~~N~~ 284 (305)
T d1xkua_ 216 ANTPHLRELHLNNNKLVKVPGGLADHKYIQVVYLHNNNI-SAIGSNDFCPPGYNTKKASYSGVSLFSNPV 284 (305)
T ss_dssp GGSTTCCEEECCSSCCSSCCTTTTTCSSCCEEECCSSCC-CCCCTTSSSCSSCCTTSCCCSEEECCSSSS
T ss_pred cccccceeeecccccccccccccccccCCCEEECCCCcc-CccChhhccCcchhcccCCCCEEECCCCcC
Confidence 233555555555555555555555555555555555442 23321 134566666666653
No 4
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.89 E-value=1.2e-23 Score=214.73 Aligned_cols=244 Identities=16% Similarity=0.195 Sum_probs=170.0
Q ss_pred CCceEEEcCCCCCc---cccccCCCCCCCcEEEccC-CCCCCCCC-CCCCCCCCCEEeecCCCCCcccCccccCCCCCCE
Q 006695 77 ENLVKLNLPYSKVV---QIWEGKKRAFKLKYVDIHN-SQYLIRMP-DLSETPNLERTNLKNCINLTCVPSSVQNFNHLSM 151 (635)
Q Consensus 77 ~~L~~L~L~~n~l~---~l~~~~~~l~~L~~L~Ls~-n~~~~~~p-~l~~l~~L~~L~L~~n~~l~~~~~~i~~l~~L~~ 151 (635)
.+++.|+|+++.+. .+|..+.++++|++|+|++ |.+.+.+| .++++++|++|+|++|...+..+..+..+.+|+.
T Consensus 50 ~~v~~L~L~~~~l~g~~~lp~~l~~L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~ 129 (313)
T d1ogqa_ 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred EEEEEEECCCCCCCCCCCCChHHhcCccccccccccccccccccccccccccccchhhhccccccccccccccchhhhcc
Confidence 36788888888776 4778888888888888876 66666676 4888888888888888777777777788888888
Q ss_pred EeecCCCCCCccCCCC-CCCCCcEEecCCCCCCCccCcccCCcceEEecccccc-ccCcccccCCCc-cEEEeecccccc
Q 006695 152 LCFEGCKSLRSFPSNL-HFMSPIKIDFSSCFNLTEFPQISGNITDLILSETAIQ-EVPSSIECLTNL-EKLYINRCMRLK 228 (635)
Q Consensus 152 L~L~~~~~l~~lp~~~-~l~~L~~L~l~~c~~l~~~p~~~~~L~~L~L~~n~i~-~lp~~~~~l~~L-~~L~L~~n~~~~ 228 (635)
+++++|.....+|..+ .++ +++.+++++|.++ .+|..+..+.++ +.+++++|++.+
T Consensus 130 l~l~~N~~~~~~p~~l~~l~---------------------~L~~l~l~~n~l~~~ip~~~~~l~~l~~~l~~~~n~l~~ 188 (313)
T d1ogqa_ 130 LDFSYNALSGTLPPSISSLP---------------------NLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTG 188 (313)
T ss_dssp EECCSSEEESCCCGGGGGCT---------------------TCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEE
T ss_pred cccccccccccCchhhccCc---------------------ccceeeccccccccccccccccccccccccccccccccc
Confidence 8888776655555433 333 3445555555554 456666666654 667777777777
Q ss_pred cchhcccCCCCCcEEecCCCCCCCcchhhhcCCCCCCEEEecCCCccccCchhcccccchhhccCCCCccEEEcCCCCCC
Q 006695 229 RLSTSICKLKSLHVLVLDDCSKLERFPEILEKMESVKCISLERTAITELPSSFANLEGLKDLYIGGSSLRQLNLSRNDSE 308 (635)
Q Consensus 229 ~lp~~~~~l~~L~~L~Ls~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~lp~~~~~l~~L~~l~~~~~~L~~L~Ls~n~~~ 308 (635)
..|..+..+..+ .++++++...+.+|..+..+++|+.+++++|.++..+..+ ..+++|+.|+|++|+++
T Consensus 189 ~~~~~~~~l~~~-~l~l~~~~~~~~~~~~~~~~~~l~~l~~~~~~l~~~~~~~----------~~~~~L~~L~Ls~N~l~ 257 (313)
T d1ogqa_ 189 KIPPTFANLNLA-FVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKV----------GLSKNLNGLDLRNNRIY 257 (313)
T ss_dssp ECCGGGGGCCCS-EEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGGC----------CCCTTCCEEECCSSCCE
T ss_pred cccccccccccc-cccccccccccccccccccccccccccccccccccccccc----------ccccccccccCccCeec
Confidence 777666665544 5777777777777777777777777777777776544333 33467778888888775
Q ss_pred -cccccccCCCCccEEeccCCCCCCcCCCC--CCccceecccccccc
Q 006695 309 -SLPASITQLSQLRSLHLKDCSMLSSLPEL--PQSLELLDAENCKQL 352 (635)
Q Consensus 309 -~lp~~l~~l~~L~~L~L~~n~~l~~lp~l--~~sL~~L~l~~c~~l 352 (635)
.+|.+++++++|++|+|++|++.+.+|+. +++|+.+++++|+.+
T Consensus 258 g~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~~~L~~L~~l~l~~N~~l 304 (313)
T d1ogqa_ 258 GTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCL 304 (313)
T ss_dssp ECCCGGGGGCTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCSSSEE
T ss_pred ccCChHHhCCCCCCEEECcCCcccccCCCcccCCCCCHHHhCCCccc
Confidence 67777888888888888887777777763 356666666666544
No 5
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.87 E-value=6.7e-23 Score=209.05 Aligned_cols=247 Identities=18% Similarity=0.200 Sum_probs=197.8
Q ss_pred cceEeecCCCCCC---CCCCCC-CCCCceEEEcCC-CCCc-cccccCCCCCCCcEEEccCCCCCCCCCC-CCCCCCCCEE
Q 006695 56 ELRYLHWHEYPSK---ALPFDF-EPENLVKLNLPY-SKVV-QIWEGKKRAFKLKYVDIHNSQYLIRMPD-LSETPNLERT 128 (635)
Q Consensus 56 ~L~~L~l~~~~l~---~lp~~~-~l~~L~~L~L~~-n~l~-~l~~~~~~l~~L~~L~Ls~n~~~~~~p~-l~~l~~L~~L 128 (635)
+++.|++.++.+. .+|..+ .+++|++|+|++ |++. .+|..+.++++|++|+|++|++....+. +..+++|+.+
T Consensus 51 ~v~~L~L~~~~l~g~~~lp~~l~~L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l 130 (313)
T d1ogqa_ 51 RVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTL 130 (313)
T ss_dssp CEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEE
T ss_pred EEEEEECCCCCCCCCCCCChHHhcCccccccccccccccccccccccccccccchhhhccccccccccccccchhhhccc
Confidence 4888888888775 477776 789999999986 7777 7899999999999999999998776664 7888999999
Q ss_pred eecCCCCCcccCccccCCCCCCEEeecCCCCCCccCCCC-CCCCCcEEecCCCCCCCccCcccCCcceEEecccccccc-
Q 006695 129 NLKNCINLTCVPSSVQNFNHLSMLCFEGCKSLRSFPSNL-HFMSPIKIDFSSCFNLTEFPQISGNITDLILSETAIQEV- 206 (635)
Q Consensus 129 ~L~~n~~l~~~~~~i~~l~~L~~L~L~~~~~l~~lp~~~-~l~~L~~L~l~~c~~l~~~p~~~~~L~~L~L~~n~i~~l- 206 (635)
++++|.....+|..++.+++|+.+++++|.....+|..+ .+.. .++.+++++|+++..
T Consensus 131 ~l~~N~~~~~~p~~l~~l~~L~~l~l~~n~l~~~ip~~~~~l~~--------------------l~~~l~~~~n~l~~~~ 190 (313)
T d1ogqa_ 131 DFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSK--------------------LFTSMTISRNRLTGKI 190 (313)
T ss_dssp ECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCT--------------------TCCEEECCSSEEEEEC
T ss_pred ccccccccccCchhhccCcccceeeccccccccccccccccccc--------------------cccccccccccccccc
Confidence 999998888899999999999999999987666666533 2222 235666777777754
Q ss_pred CcccccCCCccEEEeecccccccchhcccCCCCCcEEecCCCCCCCcchhhhcCCCCCCEEEecCCCcc-ccCchhcccc
Q 006695 207 PSSIECLTNLEKLYINRCMRLKRLSTSICKLKSLHVLVLDDCSKLERFPEILEKMESVKCISLERTAIT-ELPSSFANLE 285 (635)
Q Consensus 207 p~~~~~l~~L~~L~L~~n~~~~~lp~~~~~l~~L~~L~Ls~n~~~~~~~~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~ 285 (635)
|..+..+.. ..+++..+...+.+|..+..+++|+.+++++|.+.+.++ .++.+++|+.|++++|+++ .+|..++
T Consensus 191 ~~~~~~l~~-~~l~l~~~~~~~~~~~~~~~~~~l~~l~~~~~~l~~~~~-~~~~~~~L~~L~Ls~N~l~g~iP~~l~--- 265 (313)
T d1ogqa_ 191 PPTFANLNL-AFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLG-KVGLSKNLNGLDLRNNRIYGTLPQGLT--- 265 (313)
T ss_dssp CGGGGGCCC-SEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGG-GCCCCTTCCEEECCSSCCEECCCGGGG---
T ss_pred ccccccccc-ccccccccccccccccccccccccccccccccccccccc-ccccccccccccCccCeecccCChHHh---
Confidence 444555544 468888888888888888899999999999988776654 5788899999999999998 7887764
Q ss_pred cchhhccCCCCccEEEcCCCCCC-cccccccCCCCccEEeccCCCCCCcCC
Q 006695 286 GLKDLYIGGSSLRQLNLSRNDSE-SLPASITQLSQLRSLHLKDCSMLSSLP 335 (635)
Q Consensus 286 ~L~~l~~~~~~L~~L~Ls~n~~~-~lp~~l~~l~~L~~L~L~~n~~l~~lp 335 (635)
.+++|++|+|++|+++ .+| .++++++|+.+++++|+.+...|
T Consensus 266 -------~L~~L~~L~Ls~N~l~g~iP-~~~~L~~L~~l~l~~N~~l~g~p 308 (313)
T d1ogqa_ 266 -------QLKFLHSLNVSFNNLCGEIP-QGGNLQRFDVSAYANNKCLCGSP 308 (313)
T ss_dssp -------GCTTCCEEECCSSEEEEECC-CSTTGGGSCGGGTCSSSEEESTT
T ss_pred -------CCCCCCEEECcCCcccccCC-CcccCCCCCHHHhCCCccccCCC
Confidence 4578999999999986 777 46788999999999998765543
No 6
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.87 E-value=2.3e-20 Score=189.14 Aligned_cols=263 Identities=16% Similarity=0.146 Sum_probs=180.2
Q ss_pred CcEEEeecCCCCCCcccceeeecCCcccCCCccceEeecCCCCCCCCCCC-C-CCCCceEEEcCCCCCccc-cccCCCCC
Q 006695 24 LRFLKFYMPEHNGVPIMISKVHLDQGLEYLPNELRYLHWHEYPSKALPFD-F-EPENLVKLNLPYSKVVQI-WEGKKRAF 100 (635)
Q Consensus 24 L~~L~L~~n~l~~~~~~~~~~~l~~~l~~l~~~L~~L~l~~~~l~~lp~~-~-~l~~L~~L~L~~n~l~~l-~~~~~~l~ 100 (635)
++.++=++..++ .+|.++ |..+++|++++|.++.+|+. | ++++|++|++++|.+..+ |..+.+++
T Consensus 12 ~~~~~C~~~~L~---------~lP~~l---~~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~ 79 (305)
T d1xkua_ 12 LRVVQCSDLGLE---------KVPKDL---PPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLV 79 (305)
T ss_dssp TTEEECTTSCCC---------SCCCSC---CTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCT
T ss_pred CCEEEecCCCCC---------ccCCCC---CCCCCEEECcCCcCCCcChhHhhccccccccccccccccccchhhhhCCC
Confidence 455555555555 344443 34699999999999999874 6 788999999999999887 45688899
Q ss_pred CCcEEEccCCCCCCCCCCCCCCCCCCEEeecCCCCCcccCccccCCCCCCEEeecCCCCCCccCCCCCCCCCcEEecCCC
Q 006695 101 KLKYVDIHNSQYLIRMPDLSETPNLERTNLKNCINLTCVPSSVQNFNHLSMLCFEGCKSLRSFPSNLHFMSPIKIDFSSC 180 (635)
Q Consensus 101 ~L~~L~Ls~n~~~~~~p~l~~l~~L~~L~L~~n~~l~~~~~~i~~l~~L~~L~L~~~~~l~~lp~~~~l~~L~~L~l~~c 180 (635)
+|++|++++|++. .+|. ...+.++.|.+.+|......+..+.....+..++...+.........
T Consensus 80 ~L~~L~l~~n~l~-~l~~-~~~~~l~~L~~~~n~l~~l~~~~~~~~~~~~~l~~~~n~~~~~~~~~-------------- 143 (305)
T d1xkua_ 80 KLERLYLSKNQLK-ELPE-KMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIEN-------------- 143 (305)
T ss_dssp TCCEEECCSSCCS-BCCS-SCCTTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCT--------------
T ss_pred ccCEecccCCccC-cCcc-chhhhhhhhhccccchhhhhhhhhhccccccccccccccccccCCCc--------------
Confidence 9999999999854 4553 23468889999888665554555677778888888776433221110
Q ss_pred CCCCccCcccCCcceEEeccccccccCcccccCCCccEEEeecccccccchhcccCCCCCcEEecCCCCCCCcchhhhcC
Q 006695 181 FNLTEFPQISGNITDLILSETAIQEVPSSIECLTNLEKLYINRCMRLKRLSTSICKLKSLHVLVLDDCSKLERFPEILEK 260 (635)
Q Consensus 181 ~~l~~~p~~~~~L~~L~L~~n~i~~lp~~~~~l~~L~~L~L~~n~~~~~lp~~~~~l~~L~~L~Ls~n~~~~~~~~~l~~ 260 (635)
.......+|+.+++++|.+..+|..+ +++|+.|++++|......+..+.+++.++.|++++|.+.+..+..+..
T Consensus 144 ----~~~~~l~~L~~l~l~~n~l~~l~~~~--~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~s~n~l~~~~~~~~~~ 217 (305)
T d1xkua_ 144 ----GAFQGMKKLSYIRIADTNITTIPQGL--PPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLAN 217 (305)
T ss_dssp ----TGGGGCTTCCEEECCSSCCCSCCSSC--CTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGG
T ss_pred ----cccccccccCccccccCCccccCccc--CCccCEEECCCCcCCCCChhHhhccccccccccccccccccccccccc
Confidence 00111234555555666666665443 467777777777777777777777777777777777776666677777
Q ss_pred CCCCCEEEecCCCccccCchhcccccchhhccCCCCccEEEcCCCCCCccccc-------ccCCCCccEEeccCCCC
Q 006695 261 MESVKCISLERTAITELPSSFANLEGLKDLYIGGSSLRQLNLSRNDSESLPAS-------ITQLSQLRSLHLKDCSM 330 (635)
Q Consensus 261 l~~L~~L~L~~n~l~~lp~~~~~l~~L~~l~~~~~~L~~L~Ls~n~~~~lp~~-------l~~l~~L~~L~L~~n~~ 330 (635)
+++|++|+|++|+|+.+|..+ ..+++|+.|+|++|+++.|+.. ...+.+|+.|+|++|+.
T Consensus 218 l~~L~~L~L~~N~L~~lp~~l----------~~l~~L~~L~Ls~N~i~~i~~~~f~~~~~~~~~~~L~~L~L~~N~~ 284 (305)
T d1xkua_ 218 TPHLRELHLNNNKLVKVPGGL----------ADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPV 284 (305)
T ss_dssp STTCCEEECCSSCCSSCCTTT----------TTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSS
T ss_pred cccceeeeccccccccccccc----------ccccCCCEEECCCCccCccChhhccCcchhcccCCCCEEECCCCcC
Confidence 777777777777777777654 3346777777877777776542 24567788888888775
No 7
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.85 E-value=4.3e-19 Score=182.55 Aligned_cols=305 Identities=21% Similarity=0.258 Sum_probs=202.2
Q ss_pred CCCcEEEeecCCCCCCcccceeeecCCcccCCCccceEeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccccCCCCCC
Q 006695 22 PNLRFLKFYMPEHNGVPIMISKVHLDQGLEYLPNELRYLHWHEYPSKALPFDFEPENLVKLNLPYSKVVQIWEGKKRAFK 101 (635)
Q Consensus 22 ~~L~~L~L~~n~l~~~~~~~~~~~l~~~l~~l~~~L~~L~l~~~~l~~lp~~~~l~~L~~L~L~~n~l~~l~~~~~~l~~ 101 (635)
.+|+.|+++++.++. +|+. +.+|++|++++|.++++|.. +.+|+.|++++|+++.+++- .+.
T Consensus 38 ~~l~~LdLs~~~L~~---------lp~~----~~~L~~L~Ls~N~l~~lp~~--~~~L~~L~l~~n~l~~l~~l---p~~ 99 (353)
T d1jl5a_ 38 RQAHELELNNLGLSS---------LPEL----PPHLESLVASCNSLTELPEL--PQSLKSLLVDNNNLKALSDL---PPL 99 (353)
T ss_dssp HTCSEEECTTSCCSC---------CCSC----CTTCSEEECCSSCCSSCCCC--CTTCCEEECCSSCCSCCCSC---CTT
T ss_pred cCCCEEEeCCCCCCC---------CCCC----CCCCCEEECCCCCCcccccc--hhhhhhhhhhhcccchhhhh---ccc
Confidence 368899999888773 3332 23589999999999988875 35888999999988877532 246
Q ss_pred CcEEEccCCCCCCCCCCCCCCCCCCEEeecCCCCCcccCccccCCCCCCEEeecCCCCCCccCCCCCCCCCcEEecCCCC
Q 006695 102 LKYVDIHNSQYLIRMPDLSETPNLERTNLKNCINLTCVPSSVQNFNHLSMLCFEGCKSLRSFPSNLHFMSPIKIDFSSCF 181 (635)
Q Consensus 102 L~~L~Ls~n~~~~~~p~l~~l~~L~~L~L~~n~~l~~~~~~i~~l~~L~~L~L~~~~~l~~lp~~~~l~~L~~L~l~~c~ 181 (635)
|++|++++|.+ ..+|+++.+++|+.|++++|... ..+. ....+..+.+..+.... ......++.++.+.+.++.
T Consensus 100 L~~L~L~~n~l-~~lp~~~~l~~L~~L~l~~~~~~-~~~~---~~~~l~~l~~~~~~~~~-~~~l~~l~~l~~L~l~~n~ 173 (353)
T d1jl5a_ 100 LEYLGVSNNQL-EKLPELQNSSFLKIIDVDNNSLK-KLPD---LPPSLEFIAAGNNQLEE-LPELQNLPFLTAIYADNNS 173 (353)
T ss_dssp CCEEECCSSCC-SSCCCCTTCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCSS-CCCCTTCTTCCEEECCSSC
T ss_pred ccccccccccc-ccccchhhhccceeecccccccc-cccc---ccccccchhhccccccc-cccccccccceeccccccc
Confidence 88999999874 56777888899999999887543 2222 34566677776544322 2222356777888877753
Q ss_pred CCCccCcccCCcceEEeccccccccCcccccCCCccEEEeecccccccchhcccCCCCCcEEecCCCCCCCcchhhhcCC
Q 006695 182 NLTEFPQISGNITDLILSETAIQEVPSSIECLTNLEKLYINRCMRLKRLSTSICKLKSLHVLVLDDCSKLERFPEILEKM 261 (635)
Q Consensus 182 ~l~~~p~~~~~L~~L~L~~n~i~~lp~~~~~l~~L~~L~L~~n~~~~~lp~~~~~l~~L~~L~Ls~n~~~~~~~~~l~~l 261 (635)
....+......+.+...++.+..++. +..++.|+.+++++|.... .+ ....++..+.+.++..... + ...
T Consensus 174 -~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~l~~L~~l~l~~n~~~~-~~---~~~~~l~~~~~~~~~~~~~-~---~~~ 243 (353)
T d1jl5a_ 174 -LKKLPDLPLSLESIVAGNNILEELPE-LQNLPFLTTIYADNNLLKT-LP---DLPPSLEALNVRDNYLTDL-P---ELP 243 (353)
T ss_dssp -CSSCCCCCTTCCEEECCSSCCSSCCC-CTTCTTCCEEECCSSCCSS-CC---SCCTTCCEEECCSSCCSCC-C---CCC
T ss_pred -cccccccccccccccccccccccccc-ccccccccccccccccccc-cc---ccccccccccccccccccc-c---ccc
Confidence 33444444556677777777766654 5678888888888876443 22 2345667777777655432 1 123
Q ss_pred CCCCEEEecCCCccccC---chhccc----ccchhhccCCCCccEEEcCCCCCCcccccccCCCCccEEeccCCCCCCcC
Q 006695 262 ESVKCISLERTAITELP---SSFANL----EGLKDLYIGGSSLRQLNLSRNDSESLPASITQLSQLRSLHLKDCSMLSSL 334 (635)
Q Consensus 262 ~~L~~L~L~~n~l~~lp---~~~~~l----~~L~~l~~~~~~L~~L~Ls~n~~~~lp~~l~~l~~L~~L~L~~n~~l~~l 334 (635)
..+...++..+.+..++ ...... ..+......+++|++|+|++|+++++|+. +++|+.|+|++|++ +.+
T Consensus 244 ~~l~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~---~~~L~~L~L~~N~L-~~l 319 (353)
T d1jl5a_ 244 QSLTFLDVSENIFSGLSELPPNLYYLNASSNEIRSLCDLPPSLEELNVSNNKLIELPAL---PPRLERLIASFNHL-AEV 319 (353)
T ss_dssp TTCCEEECCSSCCSEESCCCTTCCEEECCSSCCSEECCCCTTCCEEECCSSCCSCCCCC---CTTCCEEECCSSCC-SCC
T ss_pred ccccccccccccccccccccchhcccccccCccccccccCCCCCEEECCCCccCccccc---cCCCCEEECCCCcC-Ccc
Confidence 44555555555444322 111100 11222233457899999999999999864 57899999998764 578
Q ss_pred CCCCCccceecccccccccccCccccCcccc
Q 006695 335 PELPQSLELLDAENCKQLQFIPEILSGLEEV 365 (635)
Q Consensus 335 p~l~~sL~~L~l~~c~~l~~~~~~~~~L~~L 365 (635)
|+.+++|++|++++|+ ++.+|.....++.|
T Consensus 320 ~~~~~~L~~L~L~~N~-L~~lp~~~~~L~~L 349 (353)
T d1jl5a_ 320 PELPQNLKQLHVEYNP-LREFPDIPESVEDL 349 (353)
T ss_dssp CCCCTTCCEEECCSSC-CSSCCCCCTTCCEE
T ss_pred ccccCCCCEEECcCCc-CCCCCccccccCee
Confidence 9888999999999997 67788766555554
No 8
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.84 E-value=2.8e-19 Score=183.92 Aligned_cols=291 Identities=20% Similarity=0.204 Sum_probs=191.8
Q ss_pred eeecCCCcccccChhhhcCCCCCcEEEeecCCCCCCcccceeeecCCcccCCCccceEeecCCCCCCCCCCCCCCCCceE
Q 006695 2 FLDLSKITSIHLSPQAFANMPNLRFLKFYMPEHNGVPIMISKVHLDQGLEYLPNELRYLHWHEYPSKALPFDFEPENLVK 81 (635)
Q Consensus 2 ~LdLs~n~~~~l~~~~f~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~~l~~l~~~L~~L~l~~~~l~~lp~~~~l~~L~~ 81 (635)
.|||+++.++.++. -+++|++|++++|+++. +|+. +.+|+.|++.+|.++.++.. ++.|++
T Consensus 42 ~LdLs~~~L~~lp~----~~~~L~~L~Ls~N~l~~---------lp~~----~~~L~~L~l~~n~l~~l~~l--p~~L~~ 102 (353)
T d1jl5a_ 42 ELELNNLGLSSLPE----LPPHLESLVASCNSLTE---------LPEL----PQSLKSLLVDNNNLKALSDL--PPLLEY 102 (353)
T ss_dssp EEECTTSCCSCCCS----CCTTCSEEECCSSCCSS---------CCCC----CTTCCEEECCSSCCSCCCSC--CTTCCE
T ss_pred EEEeCCCCCCCCCC----CCCCCCEEECCCCCCcc---------cccc----hhhhhhhhhhhcccchhhhh--cccccc
Confidence 68999999988863 36799999999999983 4433 23599999999999888753 357999
Q ss_pred EEcCCCCCccccccCCCCCCCcEEEccCCCCCCCCCCCCCCCCCCEEeecCCCCCcccCccccCCCCCCEEeecCCCCC-
Q 006695 82 LNLPYSKVVQIWEGKKRAFKLKYVDIHNSQYLIRMPDLSETPNLERTNLKNCINLTCVPSSVQNFNHLSMLCFEGCKSL- 160 (635)
Q Consensus 82 L~L~~n~l~~l~~~~~~l~~L~~L~Ls~n~~~~~~p~l~~l~~L~~L~L~~n~~l~~~~~~i~~l~~L~~L~L~~~~~l- 160 (635)
|++++|.++.+|. +..+++|+.|+++++.+..... ....+..+.+..+... ....++.++.++.+.+.+|...
T Consensus 103 L~L~~n~l~~lp~-~~~l~~L~~L~l~~~~~~~~~~---~~~~l~~l~~~~~~~~--~~~~l~~l~~l~~L~l~~n~~~~ 176 (353)
T d1jl5a_ 103 LGVSNNQLEKLPE-LQNSSFLKIIDVDNNSLKKLPD---LPPSLEFIAAGNNQLE--ELPELQNLPFLTAIYADNNSLKK 176 (353)
T ss_dssp EECCSSCCSSCCC-CTTCTTCCEEECCSSCCSCCCC---CCTTCCEEECCSSCCS--SCCCCTTCTTCCEEECCSSCCSS
T ss_pred ccccccccccccc-hhhhccceeecccccccccccc---ccccccchhhcccccc--ccccccccccceecccccccccc
Confidence 9999999999975 5789999999999987543322 2355666666554322 2234566677777776665432
Q ss_pred ------------------CccCCCCCCCCCcEEecCCCCCCCccCcccCCcceEEeccccccccCcccccCCCccEEEee
Q 006695 161 ------------------RSFPSNLHFMSPIKIDFSSCFNLTEFPQISGNITDLILSETAIQEVPSSIECLTNLEKLYIN 222 (635)
Q Consensus 161 ------------------~~lp~~~~l~~L~~L~l~~c~~l~~~p~~~~~L~~L~L~~n~i~~lp~~~~~l~~L~~L~L~ 222 (635)
..++....++.|+.+.++++ ....++....++..+.+..+.+...+.. ...+...++.
T Consensus 177 ~~~~~~~~~~l~~~~~~~~~~~~~~~l~~L~~l~l~~n-~~~~~~~~~~~l~~~~~~~~~~~~~~~~---~~~l~~~~~~ 252 (353)
T d1jl5a_ 177 LPDLPLSLESIVAGNNILEELPELQNLPFLTTIYADNN-LLKTLPDLPPSLEALNVRDNYLTDLPEL---PQSLTFLDVS 252 (353)
T ss_dssp CCCCCTTCCEEECCSSCCSSCCCCTTCTTCCEEECCSS-CCSSCCSCCTTCCEEECCSSCCSCCCCC---CTTCCEEECC
T ss_pred cccccccccccccccccccccccccccccccccccccc-cccccccccccccccccccccccccccc---cccccccccc
Confidence 22222224445555555443 2233344444455555555544443322 1233333333
Q ss_pred cccccccchhcccCC-CCCcEEecCCCCCCCcchhhhcCCCCCCEEEecCCCccccCchhcccccchhhccCCCCccEEE
Q 006695 223 RCMRLKRLSTSICKL-KSLHVLVLDDCSKLERFPEILEKMESVKCISLERTAITELPSSFANLEGLKDLYIGGSSLRQLN 301 (635)
Q Consensus 223 ~n~~~~~lp~~~~~l-~~L~~L~Ls~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~lp~~~~~l~~L~~l~~~~~~L~~L~ 301 (635)
.+...+ +..+ ......++..+.+.+ ....+++|++|++++|+|+++|.. +++|+.|+
T Consensus 253 ~~~~~~-----l~~l~~~~~~~~~~~~~~~~----~~~~~~~L~~L~Ls~N~l~~lp~~-------------~~~L~~L~ 310 (353)
T d1jl5a_ 253 ENIFSG-----LSELPPNLYYLNASSNEIRS----LCDLPPSLEELNVSNNKLIELPAL-------------PPRLERLI 310 (353)
T ss_dssp SSCCSE-----ESCCCTTCCEEECCSSCCSE----ECCCCTTCCEEECCSSCCSCCCCC-------------CTTCCEEE
T ss_pred cccccc-----cccccchhcccccccCcccc----ccccCCCCCEEECCCCccCccccc-------------cCCCCEEE
Confidence 322211 1111 233444444443322 234468999999999999999864 37899999
Q ss_pred cCCCCCCcccccccCCCCccEEeccCCCCCCcCCCCCCccceeccc
Q 006695 302 LSRNDSESLPASITQLSQLRSLHLKDCSMLSSLPELPQSLELLDAE 347 (635)
Q Consensus 302 Ls~n~~~~lp~~l~~l~~L~~L~L~~n~~l~~lp~l~~sL~~L~l~ 347 (635)
|++|+++++|.. +++|++|+|++|+ ++.+|+.|.+|+.|.+.
T Consensus 311 L~~N~L~~l~~~---~~~L~~L~L~~N~-L~~lp~~~~~L~~L~~~ 352 (353)
T d1jl5a_ 311 ASFNHLAEVPEL---PQNLKQLHVEYNP-LREFPDIPESVEDLRMN 352 (353)
T ss_dssp CCSSCCSCCCCC---CTTCCEEECCSSC-CSSCCCCCTTCCEEECC
T ss_pred CCCCcCCccccc---cCCCCEEECcCCc-CCCCCccccccCeeECc
Confidence 999999999853 5689999999987 67899999999999874
No 9
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82 E-value=1.1e-19 Score=182.19 Aligned_cols=219 Identities=17% Similarity=0.225 Sum_probs=137.4
Q ss_pred EeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc-cCCCCCCCcEEEccCCCCCCCCC-CCCCCCCCCEEeecCCCCC
Q 006695 59 YLHWHEYPSKALPFDFEPENLVKLNLPYSKVVQIWE-GKKRAFKLKYVDIHNSQYLIRMP-DLSETPNLERTNLKNCINL 136 (635)
Q Consensus 59 ~L~l~~~~l~~lp~~~~l~~L~~L~L~~n~l~~l~~-~~~~l~~L~~L~Ls~n~~~~~~p-~l~~l~~L~~L~L~~n~~l 136 (635)
.+..++..++++|..+ +.++++|+|++|+|+.+|. .+.++++|++|++++|++....+ .+..++.++.+....+...
T Consensus 15 ~v~c~~~~L~~iP~~i-p~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~~ 93 (284)
T d1ozna_ 15 TTSCPQQGLQAVPVGI-PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQL 93 (284)
T ss_dssp EEECCSSCCSSCCTTC-CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTC
T ss_pred EEEcCCCCCCccCCCC-CCCCCEEECcCCcCCCCCHHHhhcccccccccccccccccccccccccccccccccccccccc
Confidence 3456777788888765 3568888999998888875 47888888888888887655444 3667778888777655555
Q ss_pred ccc-CccccCCCCCCEEeecCCCCCCccCCCCCCCCCcEEecCCCCCCCccCcccCCcceEEeccccccccCc-ccccCC
Q 006695 137 TCV-PSSVQNFNHLSMLCFEGCKSLRSFPSNLHFMSPIKIDFSSCFNLTEFPQISGNITDLILSETAIQEVPS-SIECLT 214 (635)
Q Consensus 137 ~~~-~~~i~~l~~L~~L~L~~~~~l~~lp~~~~l~~L~~L~l~~c~~l~~~p~~~~~L~~L~L~~n~i~~lp~-~~~~l~ 214 (635)
..+ +..+..+++|++|++++|......+..+ ....+|+.+++++|.++.+|. .+..++
T Consensus 94 ~~l~~~~~~~l~~L~~L~l~~n~~~~~~~~~~--------------------~~~~~L~~l~l~~N~l~~i~~~~f~~~~ 153 (284)
T d1ozna_ 94 RSVDPATFHGLGRLHTLHLDRCGLQELGPGLF--------------------RGLAALQYLYLQDNALQALPDDTFRDLG 153 (284)
T ss_dssp CCCCTTTTTTCTTCCEEECTTSCCCCCCTTTT--------------------TTCTTCCEEECCSSCCCCCCTTTTTTCT
T ss_pred ccccchhhcccccCCEEecCCccccccccccc--------------------chhcccchhhhccccccccChhHhcccc
Confidence 444 5557777778888777765322111111 122345666666666666653 355666
Q ss_pred CccEEEeecccccccchhcccCCCCCcEEecCCCCCCCcchhhhcCCCCCCEEEecCCCccccCchhcccccchhhccCC
Q 006695 215 NLEKLYINRCMRLKRLSTSICKLKSLHVLVLDDCSKLERFPEILEKMESVKCISLERTAITELPSSFANLEGLKDLYIGG 294 (635)
Q Consensus 215 ~L~~L~L~~n~~~~~lp~~~~~l~~L~~L~Ls~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~lp~~~~~l~~L~~l~~~~ 294 (635)
+|+.|++++|.+....+..|.++++|+.+++++|.+.+..|..|..+++|++|++++|.++.++.. .+..+
T Consensus 154 ~L~~L~l~~N~l~~l~~~~f~~l~~L~~l~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~i~~~~~~---------~~~~~ 224 (284)
T d1ozna_ 154 NLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTE---------ALAPL 224 (284)
T ss_dssp TCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHH---------HHTTC
T ss_pred chhhcccccCcccccchhhhccccccchhhhhhccccccChhHhhhhhhccccccccccccccccc---------ccccc
Confidence 666666666666555555666666666666666666665666666666666666666666655432 12334
Q ss_pred CCccEEEcCCCCC
Q 006695 295 SSLRQLNLSRNDS 307 (635)
Q Consensus 295 ~~L~~L~Ls~n~~ 307 (635)
++|+.|+|++|.+
T Consensus 225 ~~L~~L~l~~N~l 237 (284)
T d1ozna_ 225 RALQYLRLNDNPW 237 (284)
T ss_dssp TTCCEEECCSSCE
T ss_pred cccCEEEecCCCC
Confidence 4555555555543
No 10
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82 E-value=1.4e-19 Score=181.39 Aligned_cols=204 Identities=19% Similarity=0.223 Sum_probs=170.7
Q ss_pred CCccceEeecCCCCCCCCCCC-C-CCCCceEEEcCCCCCcccccc-CCCCCCCcEEEccCCCCCCCCC--CCCCCCCCCE
Q 006695 53 LPNELRYLHWHEYPSKALPFD-F-EPENLVKLNLPYSKVVQIWEG-KKRAFKLKYVDIHNSQYLIRMP--DLSETPNLER 127 (635)
Q Consensus 53 l~~~L~~L~l~~~~l~~lp~~-~-~l~~L~~L~L~~n~l~~l~~~-~~~l~~L~~L~Ls~n~~~~~~p--~l~~l~~L~~ 127 (635)
+|..+++|++++|.++.+|.. | ++++|++|++++|++..++.. +..+..++.++...+.....++ .++++++|++
T Consensus 30 ip~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~l~~L~~ 109 (284)
T d1ozna_ 30 IPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHT 109 (284)
T ss_dssp CCTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCE
T ss_pred CCCCCCEEECcCCcCCCCCHHHhhccccccccccccccccccccccccccccccccccccccccccccchhhcccccCCE
Confidence 345699999999999999986 6 799999999999999988654 4678899999887666566655 4899999999
Q ss_pred EeecCCCCCcccCccccCCCCCCEEeecCCCCCCccCCCCCCCCCcEEecCCCCCCCccCcccCCcceEEeccccccccC
Q 006695 128 TNLKNCINLTCVPSSVQNFNHLSMLCFEGCKSLRSFPSNLHFMSPIKIDFSSCFNLTEFPQISGNITDLILSETAIQEVP 207 (635)
Q Consensus 128 L~L~~n~~l~~~~~~i~~l~~L~~L~L~~~~~l~~lp~~~~l~~L~~L~l~~c~~l~~~p~~~~~L~~L~L~~n~i~~lp 207 (635)
|++++|......+..+...++|+.+++++|. ++.+|... -....+|+.|++++|.++.++
T Consensus 110 L~l~~n~~~~~~~~~~~~~~~L~~l~l~~N~-l~~i~~~~-------------------f~~~~~L~~L~l~~N~l~~l~ 169 (284)
T d1ozna_ 110 LHLDRCGLQELGPGLFRGLAALQYLYLQDNA-LQALPDDT-------------------FRDLGNLTHLFLHGNRISSVP 169 (284)
T ss_dssp EECTTSCCCCCCTTTTTTCTTCCEEECCSSC-CCCCCTTT-------------------TTTCTTCCEEECCSSCCCEEC
T ss_pred EecCCcccccccccccchhcccchhhhcccc-ccccChhH-------------------hccccchhhcccccCcccccc
Confidence 9999997766666778889999999999865 34444311 012246777888888888886
Q ss_pred c-ccccCCCccEEEeecccccccchhcccCCCCCcEEecCCCCCCCcchhhhcCCCCCCEEEecCCCccc
Q 006695 208 S-SIECLTNLEKLYINRCMRLKRLSTSICKLKSLHVLVLDDCSKLERFPEILEKMESVKCISLERTAITE 276 (635)
Q Consensus 208 ~-~~~~l~~L~~L~L~~n~~~~~lp~~~~~l~~L~~L~Ls~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~ 276 (635)
. .+.++++|+++++++|++.+..|..|.++++|++|++++|.+.+..+..|+.+++|+.|++++|.+..
T Consensus 170 ~~~f~~l~~L~~l~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~l~~N~l~C 239 (284)
T d1ozna_ 170 ERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVC 239 (284)
T ss_dssp TTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEEC
T ss_pred hhhhccccccchhhhhhccccccChhHhhhhhhcccccccccccccccccccccccccCEEEecCCCCCC
Confidence 4 58899999999999999999889999999999999999999999889999999999999999998873
No 11
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.81 E-value=3.7e-19 Score=176.64 Aligned_cols=97 Identities=16% Similarity=0.152 Sum_probs=59.1
Q ss_pred ceEeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc-cCCCCCCCcEEEccCCCCCCCCCCCCCCCCCCEEeecCCCC
Q 006695 57 LRYLHWHEYPSKALPFDFEPENLVKLNLPYSKVVQIWE-GKKRAFKLKYVDIHNSQYLIRMPDLSETPNLERTNLKNCIN 135 (635)
Q Consensus 57 L~~L~l~~~~l~~lp~~~~l~~L~~L~L~~n~l~~l~~-~~~~l~~L~~L~Ls~n~~~~~~p~l~~l~~L~~L~L~~n~~ 135 (635)
+...+.+++.++++|..+ +++|++|+|++|+|+.++. .+.++++|++|+|++|++ +.+|.++.+++|++|+|++|.
T Consensus 12 ~~~v~C~~~~L~~iP~~l-p~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l-~~l~~~~~l~~L~~L~Ls~N~- 88 (266)
T d1p9ag_ 12 HLEVNCDKRNLTALPPDL-PKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAEL-TKLQVDGTLPVLGTLDLSHNQ- 88 (266)
T ss_dssp CCEEECTTSCCSSCCSCC-CTTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCC-CEEECCSCCTTCCEEECCSSC-
T ss_pred CeEEEccCCCCCeeCcCc-CcCCCEEECcCCcCCCcCHHHhhccccccccccccccc-ccccccccccccccccccccc-
Confidence 344566666777777655 2567777777777777763 467777777777777764 345555666666666666663
Q ss_pred CcccCccccCCCCCCEEeecC
Q 006695 136 LTCVPSSVQNFNHLSMLCFEG 156 (635)
Q Consensus 136 l~~~~~~i~~l~~L~~L~L~~ 156 (635)
+...+..+..+++|+.|++++
T Consensus 89 l~~~~~~~~~l~~L~~L~l~~ 109 (266)
T d1p9ag_ 89 LQSLPLLGQTLPALTVLDVSF 109 (266)
T ss_dssp CSSCCCCTTTCTTCCEEECCS
T ss_pred ccccccccccccccccccccc
Confidence 233344444444444444444
No 12
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.81 E-value=7.8e-19 Score=174.20 Aligned_cols=130 Identities=22% Similarity=0.192 Sum_probs=99.0
Q ss_pred CcceEEeccccccccCcccccCCCccEEEeecccccccchhcccCCCCCcEEecCCCCCCCcchhhhcCCCCCCEEEecC
Q 006695 192 NITDLILSETAIQEVPSSIECLTNLEKLYINRCMRLKRLSTSICKLKSLHVLVLDDCSKLERFPEILEKMESVKCISLER 271 (635)
Q Consensus 192 ~L~~L~L~~n~i~~lp~~~~~l~~L~~L~L~~n~~~~~lp~~~~~l~~L~~L~Ls~n~~~~~~~~~l~~l~~L~~L~L~~ 271 (635)
+|++|+|++|.++.++..+..+++|+.|++++|.+.+..+..+..+.+++.|++++|.+....+..+..+++|+.|++++
T Consensus 78 ~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~l~~L~l~~n~l~~l~~~~~~~l~~l~~l~l~~ 157 (266)
T d1p9ag_ 78 VLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLAN 157 (266)
T ss_dssp TCCEEECCSSCCSSCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTT
T ss_pred cccccccccccccccccccccccccccccccccccceeeccccccccccccccccccccceeccccccccccchhccccc
Confidence 45555555566666666677778888888888877776677777788888888888877776677777888888888888
Q ss_pred CCccccCchhcccccchhhccCCCCccEEEcCCCCCCcccccccCCCCccEEeccCCCC
Q 006695 272 TAITELPSSFANLEGLKDLYIGGSSLRQLNLSRNDSESLPASITQLSQLRSLHLKDCSM 330 (635)
Q Consensus 272 n~l~~lp~~~~~l~~L~~l~~~~~~L~~L~Ls~n~~~~lp~~l~~l~~L~~L~L~~n~~ 330 (635)
|+++.+|.. .+..+++|++|+|++|+++.+|.++..+++|+.|+|++|+.
T Consensus 158 N~l~~~~~~---------~~~~l~~L~~L~Ls~N~L~~lp~~~~~~~~L~~L~L~~Np~ 207 (266)
T d1p9ag_ 158 NNLTELPAG---------LLNGLENLDTLLLQENSLYTIPKGFFGSHLLPFAFLHGNPW 207 (266)
T ss_dssp SCCSCCCTT---------TTTTCTTCCEEECCSSCCCCCCTTTTTTCCCSEEECCSCCB
T ss_pred ccccccCcc---------ccccccccceeecccCCCcccChhHCCCCCCCEEEecCCCC
Confidence 888877653 23456788888888888888888888888888888888754
No 13
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.69 E-value=1.2e-16 Score=154.36 Aligned_cols=203 Identities=13% Similarity=0.191 Sum_probs=120.2
Q ss_pred eecCCCCCCCCCCCCCCCCceEEEcCCCCCccccccCCCCCCCcEEEccCCCCCCCCCCCCCCCCCCEEeecCCCCCccc
Q 006695 60 LHWHEYPSKALPFDFEPENLVKLNLPYSKVVQIWEGKKRAFKLKYVDIHNSQYLIRMPDLSETPNLERTNLKNCINLTCV 139 (635)
Q Consensus 60 L~l~~~~l~~lp~~~~l~~L~~L~L~~n~l~~l~~~~~~l~~L~~L~Ls~n~~~~~~p~l~~l~~L~~L~L~~n~~l~~~ 139 (635)
+.+..+.+..+...-.+.+|+.|++.+|+|+.+ +++..+++|++|++++|.+. .++.+..+++|+.+++++|.. +.+
T Consensus 24 ~~l~~~~~~d~~~~~~l~~L~~L~l~~~~i~~l-~~l~~l~~L~~L~ls~n~i~-~~~~l~~l~~l~~l~~~~n~~-~~i 100 (227)
T d1h6ua2 24 IAAGKSNVTDTVTQADLDGITTLSAFGTGVTTI-EGVQYLNNLIGLELKDNQIT-DLAPLKNLTKITELELSGNPL-KNV 100 (227)
T ss_dssp HHTTCSSTTSEECHHHHHTCCEEECTTSCCCCC-TTGGGCTTCCEEECCSSCCC-CCGGGTTCCSCCEEECCSCCC-SCC
T ss_pred HHhCCCCcCCcCCHHHcCCcCEEECCCCCCCcc-hhHhcCCCCcEeecCCceee-ccccccccccccccccccccc-ccc
Confidence 334444444432222456778888888888777 46777888888888887644 344477777777777777643 233
Q ss_pred CccccCCCCCCEEeecCCCCCCccCCCCCCCCCcEEecCCCCCCCccCcccCCcceEEeccccccccCcccccCCCccEE
Q 006695 140 PSSVQNFNHLSMLCFEGCKSLRSFPSNLHFMSPIKIDFSSCFNLTEFPQISGNITDLILSETAIQEVPSSIECLTNLEKL 219 (635)
Q Consensus 140 ~~~i~~l~~L~~L~L~~~~~l~~lp~~~~l~~L~~L~l~~c~~l~~~p~~~~~L~~L~L~~n~i~~lp~~~~~l~~L~~L 219 (635)
+ .+..+++|+.+++++|.... ++ .+...+.++.+
T Consensus 101 ~-~l~~l~~L~~l~l~~~~~~~-~~--------------------------------------------~~~~~~~~~~l 134 (227)
T d1h6ua2 101 S-AIAGLQSIKTLDLTSTQITD-VT--------------------------------------------PLAGLSNLQVL 134 (227)
T ss_dssp G-GGTTCTTCCEEECTTSCCCC-CG--------------------------------------------GGTTCTTCCEE
T ss_pred c-cccccccccccccccccccc-cc--------------------------------------------hhccccchhhh
Confidence 2 45666666666666543221 10 12223344444
Q ss_pred EeecccccccchhcccCCCCCcEEecCCCCCCCcchhhhcCCCCCCEEEecCCCccccCchhcccccchhhccCCCCccE
Q 006695 220 YINRCMRLKRLSTSICKLKSLHVLVLDDCSKLERFPEILEKMESVKCISLERTAITELPSSFANLEGLKDLYIGGSSLRQ 299 (635)
Q Consensus 220 ~L~~n~~~~~lp~~~~~l~~L~~L~Ls~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~lp~~~~~l~~L~~l~~~~~~L~~ 299 (635)
.++++.+.... .+..+++|+.|++++|...... .++.+++|+.|++++|+++.++. + ..+++|++
T Consensus 135 ~~~~~~~~~~~--~~~~~~~L~~L~l~~n~~~~~~--~l~~l~~L~~L~Ls~n~l~~l~~-l----------~~l~~L~~ 199 (227)
T d1h6ua2 135 YLDLNQITNIS--PLAGLTNLQYLSIGNAQVSDLT--PLANLSKLTTLKADDNKISDISP-L----------ASLPNLIE 199 (227)
T ss_dssp ECCSSCCCCCG--GGGGCTTCCEEECCSSCCCCCG--GGTTCTTCCEEECCSSCCCCCGG-G----------GGCTTCCE
T ss_pred hchhhhhchhh--hhccccccccccccccccccch--hhcccccceecccCCCccCCChh-h----------cCCCCCCE
Confidence 44444333221 2344555666666665544322 25666777777777777766543 2 34567777
Q ss_pred EEcCCCCCCcccccccCCCCccEEeccC
Q 006695 300 LNLSRNDSESLPASITQLSQLRSLHLKD 327 (635)
Q Consensus 300 L~Ls~n~~~~lp~~l~~l~~L~~L~L~~ 327 (635)
|+|++|++++++ .++++++|+.|++++
T Consensus 200 L~Ls~N~lt~i~-~l~~l~~L~~L~lsn 226 (227)
T d1h6ua2 200 VHLKNNQISDVS-PLANTSNLFIVTLTN 226 (227)
T ss_dssp EECTTSCCCBCG-GGTTCTTCCEEEEEE
T ss_pred EECcCCcCCCCc-ccccCCCCCEEEeeC
Confidence 777777777776 377788888888763
No 14
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.67 E-value=4.4e-16 Score=151.52 Aligned_cols=101 Identities=22% Similarity=0.286 Sum_probs=72.9
Q ss_pred ceEeecCCCCCCCCCCCCCCCCceEEEcCCCCCcccccc-CCCCCCCcEEEccCCCCCCCCC--CCCCCCCCCEEeecCC
Q 006695 57 LRYLHWHEYPSKALPFDFEPENLVKLNLPYSKVVQIWEG-KKRAFKLKYVDIHNSQYLIRMP--DLSETPNLERTNLKNC 133 (635)
Q Consensus 57 L~~L~l~~~~l~~lp~~~~l~~L~~L~L~~n~l~~l~~~-~~~l~~L~~L~Ls~n~~~~~~p--~l~~l~~L~~L~L~~n 133 (635)
.+.++..+..++++|..+. .++++|++++|+|+.++.. +.++++|++|++++|.+...++ .|.+++++++|.+..+
T Consensus 10 ~~~i~c~~~~l~~iP~~l~-~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~~ 88 (242)
T d1xwdc1 10 NRVFLCQESKVTEIPSDLP-RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKA 88 (242)
T ss_dssp SSEEEEESCSCSSCCSCSC-SCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEECC
T ss_pred CCEEEEeCCCCCCcCCCCC-CCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeecccccccccccccccccc
Confidence 3566677777778887652 5788888888888888764 6788888888888888766554 3677888888887654
Q ss_pred CCC-cccCccccCCCCCCEEeecCCC
Q 006695 134 INL-TCVPSSVQNFNHLSMLCFEGCK 158 (635)
Q Consensus 134 ~~l-~~~~~~i~~l~~L~~L~L~~~~ 158 (635)
... ...+..+..+++|+.|++++|.
T Consensus 89 n~l~~~~~~~~~~l~~L~~l~l~~~~ 114 (242)
T d1xwdc1 89 NNLLYINPEAFQNLPNLQYLLISNTG 114 (242)
T ss_dssp TTCCEECTTSEECCTTCCEEEEESCC
T ss_pred ccccccccccccccccccccccchhh
Confidence 444 3344556778888888887754
No 15
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.63 E-value=4.5e-15 Score=144.26 Aligned_cols=83 Identities=14% Similarity=0.064 Sum_probs=59.1
Q ss_pred eEEEcCCCCCccccccCCCCCCCcEEEccCCCCCCCCC-CCCCCCCCCEEeecCCCCCcccCc-cccCCCCCCEEeecCC
Q 006695 80 VKLNLPYSKVVQIWEGKKRAFKLKYVDIHNSQYLIRMP-DLSETPNLERTNLKNCINLTCVPS-SVQNFNHLSMLCFEGC 157 (635)
Q Consensus 80 ~~L~L~~n~l~~l~~~~~~l~~L~~L~Ls~n~~~~~~p-~l~~l~~L~~L~L~~n~~l~~~~~-~i~~l~~L~~L~L~~~ 157 (635)
+.++.++.+++.+|+.+. +++++|+|++|++....+ .|.++++|++|++++|.....++. .|..+++++.+.+..+
T Consensus 11 ~~i~c~~~~l~~iP~~l~--~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~~ 88 (242)
T d1xwdc1 11 RVFLCQESKVTEIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKA 88 (242)
T ss_dssp SEEEEESCSCSSCCSCSC--SCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEECC
T ss_pred CEEEEeCCCCCCcCCCCC--CCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeecccccccccccccccccc
Confidence 567778888888887663 578889999888544333 378888888888888876665543 5677888888877665
Q ss_pred CCCCccC
Q 006695 158 KSLRSFP 164 (635)
Q Consensus 158 ~~l~~lp 164 (635)
+.+..++
T Consensus 89 n~l~~~~ 95 (242)
T d1xwdc1 89 NNLLYIN 95 (242)
T ss_dssp TTCCEEC
T ss_pred ccccccc
Confidence 5444433
No 16
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.62 E-value=4.6e-15 Score=142.92 Aligned_cols=99 Identities=10% Similarity=0.119 Sum_probs=73.1
Q ss_pred cceEeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccccCCCCCCCcEEEccCCCCCCCCCCCCCCCCCCEEeecCCCC
Q 006695 56 ELRYLHWHEYPSKALPFDFEPENLVKLNLPYSKVVQIWEGKKRAFKLKYVDIHNSQYLIRMPDLSETPNLERTNLKNCIN 135 (635)
Q Consensus 56 ~L~~L~l~~~~l~~lp~~~~l~~L~~L~L~~n~l~~l~~~~~~l~~L~~L~Ls~n~~~~~~p~l~~l~~L~~L~L~~n~~ 135 (635)
+|++|.+.++.+++++..-.+++|++|++++|.+..++ .+..+++|+++++++|.+ +.++.+.++++|+.+++++|..
T Consensus 42 ~L~~L~l~~~~i~~l~~l~~l~~L~~L~ls~n~i~~~~-~l~~l~~l~~l~~~~n~~-~~i~~l~~l~~L~~l~l~~~~~ 119 (227)
T d1h6ua2 42 GITTLSAFGTGVTTIEGVQYLNNLIGLELKDNQITDLA-PLKNLTKITELELSGNPL-KNVSAIAGLQSIKTLDLTSTQI 119 (227)
T ss_dssp TCCEEECTTSCCCCCTTGGGCTTCCEEECCSSCCCCCG-GGTTCCSCCEEECCSCCC-SCCGGGTTCTTCCEEECTTSCC
T ss_pred CcCEEECCCCCCCcchhHhcCCCCcEeecCCceeeccc-cccccccccccccccccc-cccccccccccccccccccccc
Confidence 47788888888877754336888888888888888774 378888899999988874 4567788889999999988754
Q ss_pred CcccCccccCCCCCCEEeecCCC
Q 006695 136 LTCVPSSVQNFNHLSMLCFEGCK 158 (635)
Q Consensus 136 l~~~~~~i~~l~~L~~L~L~~~~ 158 (635)
... ..+...+.++.+.++++.
T Consensus 120 ~~~--~~~~~~~~~~~l~~~~~~ 140 (227)
T d1h6ua2 120 TDV--TPLAGLSNLQVLYLDLNQ 140 (227)
T ss_dssp CCC--GGGTTCTTCCEEECCSSC
T ss_pred ccc--chhccccchhhhhchhhh
Confidence 432 235566777777776543
No 17
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.59 E-value=1.1e-14 Score=137.24 Aligned_cols=76 Identities=21% Similarity=0.373 Sum_probs=43.7
Q ss_pred ccCCCCCcEEecCCCCCCCcchhhhcCCCCCCEEEecCCCccccCchhcccccchhhccCCCCccEEEcCCCCCCccccc
Q 006695 234 ICKLKSLHVLVLDDCSKLERFPEILEKMESVKCISLERTAITELPSSFANLEGLKDLYIGGSSLRQLNLSRNDSESLPAS 313 (635)
Q Consensus 234 ~~~l~~L~~L~Ls~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~lp~~~~~l~~L~~l~~~~~~L~~L~Ls~n~~~~lp~~ 313 (635)
+..+++|+.|++++|.+.. + +.+..+++|+.|++.+|+++.++. +.++++|++|++++|+++.++ .
T Consensus 124 ~~~l~~L~~L~l~~n~l~~-~-~~l~~~~~L~~L~l~~n~l~~l~~-----------l~~l~~L~~L~ls~N~i~~i~-~ 189 (199)
T d2omxa2 124 LKNLTNLNRLELSSNTISD-I-SALSGLTSLQQLNFSSNQVTDLKP-----------LANLTTLERLDISSNKVSDIS-V 189 (199)
T ss_dssp GTTCTTCSEEECCSSCCCC-C-GGGTTCTTCSEEECCSSCCCCCGG-----------GTTCTTCCEEECCSSCCCCCG-G
T ss_pred cchhhhhHHhhhhhhhhcc-c-ccccccccccccccccccccCCcc-----------ccCCCCCCEEECCCCCCCCCc-c
Confidence 3445555555555554432 2 235556666666666666665542 234466777777777766665 3
Q ss_pred ccCCCCccEE
Q 006695 314 ITQLSQLRSL 323 (635)
Q Consensus 314 l~~l~~L~~L 323 (635)
++++++|++|
T Consensus 190 l~~L~~L~~L 199 (199)
T d2omxa2 190 LAKLTNLESL 199 (199)
T ss_dssp GGGCTTCSEE
T ss_pred ccCCCCCCcC
Confidence 6666666654
No 18
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.58 E-value=2.7e-15 Score=140.58 Aligned_cols=171 Identities=19% Similarity=0.215 Sum_probs=123.0
Q ss_pred ceEEeccccccccCcccccCCCccEEEeecccccccc-hhcccCCCCCcEEecCCCCCCCcchhhhcCCCCCCEEEecCC
Q 006695 194 TDLILSETAIQEVPSSIECLTNLEKLYINRCMRLKRL-STSICKLKSLHVLVLDDCSKLERFPEILEKMESVKCISLERT 272 (635)
Q Consensus 194 ~~L~L~~n~i~~lp~~~~~l~~L~~L~L~~n~~~~~l-p~~~~~l~~L~~L~Ls~n~~~~~~~~~l~~l~~L~~L~L~~n 272 (635)
+.++.++++++++|..+. +++++|+|++|++.+.+ +..|.++++|+.|+|++|.+....+..+..+++|++|++++|
T Consensus 11 ~~v~Cs~~~L~~iP~~lp--~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~N 88 (192)
T d1w8aa_ 11 TTVDCTGRGLKEIPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGEN 88 (192)
T ss_dssp TEEECTTSCCSSCCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSC
T ss_pred CEEEEeCCCcCccCCCCC--CCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeeccc
Confidence 467777788888887653 67888888888886543 556778888888888888888888888888888888888888
Q ss_pred CccccCchhcccccchhhccCCCCccEEEcCCCCCCccccc-ccCCCCccEEeccCCCCCCcCCC--CCCccceeccccc
Q 006695 273 AITELPSSFANLEGLKDLYIGGSSLRQLNLSRNDSESLPAS-ITQLSQLRSLHLKDCSMLSSLPE--LPQSLELLDAENC 349 (635)
Q Consensus 273 ~l~~lp~~~~~l~~L~~l~~~~~~L~~L~Ls~n~~~~lp~~-l~~l~~L~~L~L~~n~~l~~lp~--l~~sL~~L~l~~c 349 (635)
+|+.+|.. .+.++++|++|+|++|+++.+|.. +..+++|++|+|++|+.....+. +...++.+.+..+
T Consensus 89 ~l~~l~~~---------~F~~l~~L~~L~L~~N~l~~i~~~~f~~l~~L~~l~L~~N~~~~~~~~~~~~~~l~~~~l~~~ 159 (192)
T d1w8aa_ 89 KIKEISNK---------MFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGG 159 (192)
T ss_dssp CCCEECSS---------SSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGG
T ss_pred cccccCHH---------HHhCCCcccccccCCccccccCHHHhcCCcccccccccccccccccchHHHhhhhhhhcccCC
Confidence 88888653 245668888888888888888654 68888999999988876544322 2234555555554
Q ss_pred ccccccCccccCccccchhhhhhhhhccc
Q 006695 350 KQLQFIPEILSGLEEVDASVLEKATFLNS 378 (635)
Q Consensus 350 ~~l~~~~~~~~~L~~L~~l~L~~n~~~~~ 378 (635)
...-..| ..+..++.++|+.|.+.+.
T Consensus 160 ~~~c~~p---~~l~~~~l~~L~~n~l~C~ 185 (192)
T d1w8aa_ 160 AARCGAP---SKVRDVQIKDLPHSEFKCS 185 (192)
T ss_dssp GCBBCSS---TTTTTSBGGGSCTTTCCCC
T ss_pred CeEeCCC---hhhcCCEeeecCHhhCcCC
Confidence 4332333 3455567778877776554
No 19
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.57 E-value=8.9e-15 Score=137.85 Aligned_cols=80 Identities=15% Similarity=0.187 Sum_probs=52.0
Q ss_pred CCCCceEEEcCCCCCccccccCCCCCCCcEEEccCCCCCCCCCCCCCCCCCCEEeecCCCCCcccCccccCCCCCCEEee
Q 006695 75 EPENLVKLNLPYSKVVQIWEGKKRAFKLKYVDIHNSQYLIRMPDLSETPNLERTNLKNCINLTCVPSSVQNFNHLSMLCF 154 (635)
Q Consensus 75 ~l~~L~~L~L~~n~l~~l~~~~~~l~~L~~L~Ls~n~~~~~~p~l~~l~~L~~L~L~~n~~l~~~~~~i~~l~~L~~L~L 154 (635)
.+.+|++|++++++++.+ +++..+++|++|++++|++. .++.++++++|++|++++|... .++ .++.+++|+.|++
T Consensus 38 ~l~~l~~L~l~~~~i~~l-~~l~~l~nL~~L~Ls~N~l~-~~~~l~~l~~L~~L~l~~n~~~-~~~-~l~~l~~L~~L~l 113 (199)
T d2omxa2 38 DLDQVTTLQADRLGIKSI-DGVEYLNNLTQINFSNNQLT-DITPLKNLTKLVDILMNNNQIA-DIT-PLANLTNLTGLTL 113 (199)
T ss_dssp HHTTCCEEECTTSCCCCC-TTGGGCTTCCEEECCSSCCC-CCGGGTTCTTCCEEECCSSCCC-CCG-GGTTCTTCSEEEC
T ss_pred HhcCCCEEECCCCCCCCc-cccccCCCcCcCcccccccc-CcccccCCcccccccccccccc-ccc-ccccccccccccc
Confidence 356777777777777766 45677777777777777643 3445777777777777776432 232 3566666666666
Q ss_pred cCCC
Q 006695 155 EGCK 158 (635)
Q Consensus 155 ~~~~ 158 (635)
++|.
T Consensus 114 ~~~~ 117 (199)
T d2omxa2 114 FNNQ 117 (199)
T ss_dssp CSSC
T ss_pred cccc
Confidence 6544
No 20
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.57 E-value=4.7e-15 Score=141.05 Aligned_cols=163 Identities=18% Similarity=0.179 Sum_probs=112.3
Q ss_pred cceEeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccccCCCCCCCcEEEccCCCCCCCCCCCCCCCCCCEEeecCCCC
Q 006695 56 ELRYLHWHEYPSKALPFDFEPENLVKLNLPYSKVVQIWEGKKRAFKLKYVDIHNSQYLIRMPDLSETPNLERTNLKNCIN 135 (635)
Q Consensus 56 ~L~~L~l~~~~l~~lp~~~~l~~L~~L~L~~n~l~~l~~~~~~l~~L~~L~Ls~n~~~~~~p~l~~l~~L~~L~L~~n~~ 135 (635)
+|++|+++++.++.++..-.+++|++|++++|+++.++ .+..+++|++|++++|++ +.+|.+..+++|+.|++++|..
T Consensus 47 ~L~~L~l~~~~i~~l~~l~~l~~L~~L~L~~n~i~~l~-~~~~l~~L~~L~l~~n~i-~~l~~l~~l~~L~~L~l~~~~~ 124 (210)
T d1h6ta2 47 SIDQIIANNSDIKSVQGIQYLPNVTKLFLNGNKLTDIK-PLANLKNLGWLFLDENKV-KDLSSLKDLKKLKSLSLEHNGI 124 (210)
T ss_dssp TCCEEECTTSCCCCCTTGGGCTTCCEEECCSSCCCCCG-GGTTCTTCCEEECCSSCC-CCGGGGTTCTTCCEEECTTSCC
T ss_pred CccEEECcCCCCCCchhHhhCCCCCEEeCCCccccCcc-ccccCccccccccccccc-cccccccccccccccccccccc
Confidence 47777888888777765336778888888888888775 467788888888888874 4566778888888888888754
Q ss_pred CcccCccccCCCCCCEEeecCCCCCCccCCCCCCCCCcEEecCCCCCCCccCcccCCcceEEeccccccccCcccccCCC
Q 006695 136 LTCVPSSVQNFNHLSMLCFEGCKSLRSFPSNLHFMSPIKIDFSSCFNLTEFPQISGNITDLILSETAIQEVPSSIECLTN 215 (635)
Q Consensus 136 l~~~~~~i~~l~~L~~L~L~~~~~l~~lp~~~~l~~L~~L~l~~c~~l~~~p~~~~~L~~L~L~~n~i~~lp~~~~~l~~ 215 (635)
. .+ ..+..+++|+.+++++|.. ...+.... +++|+.+++++|.+++++. +.++++
T Consensus 125 ~-~~-~~l~~l~~l~~l~~~~n~l-~~~~~~~~---------------------l~~L~~l~l~~n~l~~i~~-l~~l~~ 179 (210)
T d1h6ta2 125 S-DI-NGLVHLPQLESLYLGNNKI-TDITVLSR---------------------LTKLDTLSLEDNQISDIVP-LAGLTK 179 (210)
T ss_dssp C-CC-GGGGGCTTCCEEECCSSCC-CCCGGGGG---------------------CTTCSEEECCSSCCCCCGG-GTTCTT
T ss_pred c-cc-ccccccccccccccccccc-cccccccc---------------------ccccccccccccccccccc-ccCCCC
Confidence 3 23 3577788888888877642 22221112 2455666666666666643 667777
Q ss_pred ccEEEeecccccccchhcccCCCCCcEEecCC
Q 006695 216 LEKLYINRCMRLKRLSTSICKLKSLHVLVLDD 247 (635)
Q Consensus 216 L~~L~L~~n~~~~~lp~~~~~l~~L~~L~Ls~ 247 (635)
|++|++++|.+. .++ .+.++++|++|+|++
T Consensus 180 L~~L~Ls~N~i~-~l~-~l~~l~~L~~L~Ls~ 209 (210)
T d1h6ta2 180 LQNLYLSKNHIS-DLR-ALAGLKNLDVLELFS 209 (210)
T ss_dssp CCEEECCSSCCC-BCG-GGTTCTTCSEEEEEE
T ss_pred CCEEECCCCCCC-CCh-hhcCCCCCCEEEccC
Confidence 888888777654 344 477777888887754
No 21
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.56 E-value=1.6e-14 Score=137.30 Aligned_cols=166 Identities=14% Similarity=0.160 Sum_probs=130.5
Q ss_pred CCCCceEEEcCCCCCccccccCCCCCCCcEEEccCCCCCCCCCCCCCCCCCCEEeecCCCCCcccCccccCCCCCCEEee
Q 006695 75 EPENLVKLNLPYSKVVQIWEGKKRAFKLKYVDIHNSQYLIRMPDLSETPNLERTNLKNCINLTCVPSSVQNFNHLSMLCF 154 (635)
Q Consensus 75 ~l~~L~~L~L~~n~l~~l~~~~~~l~~L~~L~Ls~n~~~~~~p~l~~l~~L~~L~L~~n~~l~~~~~~i~~l~~L~~L~L 154 (635)
.+.+|+.|+++++.++.++ ++..+++|++|+|++|++. .++.++.+++|+.|++++|. +..++ .+..+++|+.|++
T Consensus 44 ~L~~L~~L~l~~~~i~~l~-~l~~l~~L~~L~L~~n~i~-~l~~~~~l~~L~~L~l~~n~-i~~l~-~l~~l~~L~~L~l 119 (210)
T d1h6ta2 44 ELNSIDQIIANNSDIKSVQ-GIQYLPNVTKLFLNGNKLT-DIKPLANLKNLGWLFLDENK-VKDLS-SLKDLKKLKSLSL 119 (210)
T ss_dssp HHHTCCEEECTTSCCCCCT-TGGGCTTCCEEECCSSCCC-CCGGGTTCTTCCEEECCSSC-CCCGG-GGTTCTTCCEEEC
T ss_pred HhcCccEEECcCCCCCCch-hHhhCCCCCEEeCCCcccc-CccccccCcccccccccccc-ccccc-ccccccccccccc
Confidence 4678999999999999875 6889999999999999854 46678899999999999985 44555 5888999999999
Q ss_pred cCCCCCCccCCCCCCCCCcEEecCCCCCCCccCcccCCcceEEeccccccccCcccccCCCccEEEeecccccccchhcc
Q 006695 155 EGCKSLRSFPSNLHFMSPIKIDFSSCFNLTEFPQISGNITDLILSETAIQEVPSSIECLTNLEKLYINRCMRLKRLSTSI 234 (635)
Q Consensus 155 ~~~~~l~~lp~~~~l~~L~~L~l~~c~~l~~~p~~~~~L~~L~L~~n~i~~lp~~~~~l~~L~~L~L~~n~~~~~lp~~~ 234 (635)
++|... .++.. ...++++.+++++|.++..+ .+..+++|+++++++|.+.+. + .+
T Consensus 120 ~~~~~~-~~~~l---------------------~~l~~l~~l~~~~n~l~~~~-~~~~l~~L~~l~l~~n~l~~i-~-~l 174 (210)
T d1h6ta2 120 EHNGIS-DINGL---------------------VHLPQLESLYLGNNKITDIT-VLSRLTKLDTLSLEDNQISDI-V-PL 174 (210)
T ss_dssp TTSCCC-CCGGG---------------------GGCTTCCEEECCSSCCCCCG-GGGGCTTCSEEECCSSCCCCC-G-GG
T ss_pred cccccc-ccccc---------------------cccccccccccccccccccc-ccccccccccccccccccccc-c-cc
Confidence 887532 22221 12245667777777776654 477889999999999988654 3 38
Q ss_pred cCCCCCcEEecCCCCCCCcchhhhcCCCCCCEEEecC
Q 006695 235 CKLKSLHVLVLDDCSKLERFPEILEKMESVKCISLER 271 (635)
Q Consensus 235 ~~l~~L~~L~Ls~n~~~~~~~~~l~~l~~L~~L~L~~ 271 (635)
.++++|++|++++|.+. .++ .+..+++|++|+|++
T Consensus 175 ~~l~~L~~L~Ls~N~i~-~l~-~l~~l~~L~~L~Ls~ 209 (210)
T d1h6ta2 175 AGLTKLQNLYLSKNHIS-DLR-ALAGLKNLDVLELFS 209 (210)
T ss_dssp TTCTTCCEEECCSSCCC-BCG-GGTTCTTCSEEEEEE
T ss_pred cCCCCCCEEECCCCCCC-CCh-hhcCCCCCCEEEccC
Confidence 89999999999999765 455 589999999999974
No 22
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.54 E-value=3.4e-16 Score=166.17 Aligned_cols=107 Identities=9% Similarity=0.030 Sum_probs=77.7
Q ss_pred eeecCCCcccccC-hhhhcCCCCCcEEEeecCCCCCCcccceeeecCCcccCCCccceEeecCCCCCCC-----CCCCC-
Q 006695 2 FLDLSKITSIHLS-PQAFANMPNLRFLKFYMPEHNGVPIMISKVHLDQGLEYLPNELRYLHWHEYPSKA-----LPFDF- 74 (635)
Q Consensus 2 ~LdLs~n~~~~l~-~~~f~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~~l~~l~~~L~~L~l~~~~l~~-----lp~~~- 74 (635)
.||++.+++.... ...+..+++||+|+|++|.++. .+--.+...+...++ |++|++++|.+.. +...+
T Consensus 6 ~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~~~~i~~----~~~~~l~~~L~~~~~-L~~LdLs~N~i~~~~~~~l~~~l~ 80 (460)
T d1z7xw1 6 SLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTE----ARCKDISSALRVNPA-LAELNLRSNELGDVGVHCVLQGLQ 80 (460)
T ss_dssp EEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCH----HHHHHHHHHHHTCTT-CCEEECTTCCCHHHHHHHHHHTTC
T ss_pred EEEeeCCcCChHHHHHHHHhCCCCCEEEeCCCCCCH----HHHHHHHHHHhcCCC-CCEEECcCCcCChHHHHHHHHHHh
Confidence 5899999887654 4457789999999999998771 111123445556655 9999999998742 22233
Q ss_pred -CCCCceEEEcCCCCCcc-----ccccCCCCCCCcEEEccCCCCC
Q 006695 75 -EPENLVKLNLPYSKVVQ-----IWEGKKRAFKLKYVDIHNSQYL 113 (635)
Q Consensus 75 -~l~~L~~L~L~~n~l~~-----l~~~~~~l~~L~~L~Ls~n~~~ 113 (635)
...+|++|++++|+++. ++..+..+++|++|+|++|.+.
T Consensus 81 ~~~~~L~~L~L~~n~it~~~~~~l~~~l~~~~~L~~L~L~~N~i~ 125 (460)
T d1z7xw1 81 TPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLG 125 (460)
T ss_dssp STTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCH
T ss_pred cCCCCCCEEECCCCCccccccccccchhhccccccccccccccch
Confidence 23579999999999874 4456788899999999998753
No 23
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.53 E-value=9.7e-15 Score=136.76 Aligned_cols=167 Identities=18% Similarity=0.175 Sum_probs=129.7
Q ss_pred EEecCCCCCCCccCc-ccCCcceEEeccccccc-cC-cccccCCCccEEEeecccccccchhcccCCCCCcEEecCCCCC
Q 006695 174 KIDFSSCFNLTEFPQ-ISGNITDLILSETAIQE-VP-SSIECLTNLEKLYINRCMRLKRLSTSICKLKSLHVLVLDDCSK 250 (635)
Q Consensus 174 ~L~l~~c~~l~~~p~-~~~~L~~L~L~~n~i~~-lp-~~~~~l~~L~~L~L~~n~~~~~lp~~~~~l~~L~~L~Ls~n~~ 250 (635)
.++.++ ..++.+|. .+.++++|+|++|.|+. ++ ..|.++++|+.|+|++|.+....+..+..+++|++|+|++|.+
T Consensus 12 ~v~Cs~-~~L~~iP~~lp~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~N~l 90 (192)
T d1w8aa_ 12 TVDCTG-RGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKI 90 (192)
T ss_dssp EEECTT-SCCSSCCSCCCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCC
T ss_pred EEEEeC-CCcCccCCCCCCCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeeccccc
Confidence 344443 34556664 34689999999999986 43 4589999999999999999999999999999999999999999
Q ss_pred CCcchhhhcCCCCCCEEEecCCCccccCchhcccccchhhccCCCCccEEEcCCCCCCcccccccCCCCccEEeccCCCC
Q 006695 251 LERFPEILEKMESVKCISLERTAITELPSSFANLEGLKDLYIGGSSLRQLNLSRNDSESLPASITQLSQLRSLHLKDCSM 330 (635)
Q Consensus 251 ~~~~~~~l~~l~~L~~L~L~~n~l~~lp~~~~~l~~L~~l~~~~~~L~~L~Ls~n~~~~lp~~l~~l~~L~~L~L~~n~~ 330 (635)
....+.+|.++++|++|+|++|+|+.+|.. .+..+++|++|+|++|.+........-...++.+.+..+..
T Consensus 91 ~~l~~~~F~~l~~L~~L~L~~N~l~~i~~~---------~f~~l~~L~~l~L~~N~~~~~~~~~~~~~~l~~~~l~~~~~ 161 (192)
T d1w8aa_ 91 KEISNKMFLGLHQLKTLNLYDNQISCVMPG---------SFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAA 161 (192)
T ss_dssp CEECSSSSTTCTTCCEEECCSSCCCEECTT---------SSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGC
T ss_pred cccCHHHHhCCCcccccccCCccccccCHH---------HhcCCcccccccccccccccccchHHHhhhhhhhcccCCCe
Confidence 888888999999999999999999998763 24567899999999999865543211123456666777666
Q ss_pred CCcCCCCCCccceecccccc
Q 006695 331 LSSLPELPQSLELLDAENCK 350 (635)
Q Consensus 331 l~~lp~l~~sL~~L~l~~c~ 350 (635)
....|..+..++.++++.+.
T Consensus 162 ~c~~p~~l~~~~l~~L~~n~ 181 (192)
T d1w8aa_ 162 RCGAPSKVRDVQIKDLPHSE 181 (192)
T ss_dssp BBCSSTTTTTSBGGGSCTTT
T ss_pred EeCCChhhcCCEeeecCHhh
Confidence 66667666677777777654
No 24
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.44 E-value=2.3e-14 Score=142.79 Aligned_cols=84 Identities=18% Similarity=0.259 Sum_probs=42.6
Q ss_pred CCCCceEEEcCCCCCcc--ccccCCCCCCCcEEEccCCCCCCCCC-CCCCCCCCCEEeecCCCCCcc--cCccccCCCCC
Q 006695 75 EPENLVKLNLPYSKVVQ--IWEGKKRAFKLKYVDIHNSQYLIRMP-DLSETPNLERTNLKNCINLTC--VPSSVQNFNHL 149 (635)
Q Consensus 75 ~l~~L~~L~L~~n~l~~--l~~~~~~l~~L~~L~Ls~n~~~~~~p-~l~~l~~L~~L~L~~n~~l~~--~~~~i~~l~~L 149 (635)
...+|++|+++++.+.. +...+..+++|++|+|++|.+....+ .++.+++|++|++++|..++. +...+..+++|
T Consensus 44 ~~~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~~L 123 (284)
T d2astb2 44 SPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRL 123 (284)
T ss_dssp CCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTC
T ss_pred cCCCCCEEECCCCccCHHHHHHHHHhCCCcccccccccCCCcHHHHHHhcCCCCcCccccccccccccccchhhHHHHhc
Confidence 45566666766665542 33334556666666666665332222 244555666666666544332 11112344555
Q ss_pred CEEeecCCC
Q 006695 150 SMLCFEGCK 158 (635)
Q Consensus 150 ~~L~L~~~~ 158 (635)
++|++++|.
T Consensus 124 ~~L~ls~c~ 132 (284)
T d2astb2 124 DELNLSWCF 132 (284)
T ss_dssp CEEECCCCT
T ss_pred ccccccccc
Confidence 555555544
No 25
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.40 E-value=2.4e-13 Score=123.19 Aligned_cols=123 Identities=16% Similarity=0.132 Sum_probs=74.1
Q ss_pred CcceEEeccccccccCcccccCCCccEEEeecccccccchhcccCCCCCcEEecCCCCCCCcchhhhcCCCCCCEEEecC
Q 006695 192 NITDLILSETAIQEVPSSIECLTNLEKLYINRCMRLKRLSTSICKLKSLHVLVLDDCSKLERFPEILEKMESVKCISLER 271 (635)
Q Consensus 192 ~L~~L~L~~n~i~~lp~~~~~l~~L~~L~L~~n~~~~~lp~~~~~l~~L~~L~Ls~n~~~~~~~~~l~~l~~L~~L~L~~ 271 (635)
++++|+|++|+|+.++..+..+++|+.|+|++|.+... +.+..+++|++|++++|.+....+..+..+++|+.|++++
T Consensus 19 ~lr~L~L~~n~I~~i~~~~~~l~~L~~L~Ls~N~i~~l--~~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L~~L~L~~ 96 (162)
T d1a9na_ 19 RDRELDLRGYKIPVIENLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTN 96 (162)
T ss_dssp SCEEEECTTSCCCSCCCGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECCS
T ss_pred cCcEEECCCCCCCccCccccccccCCEEECCCCCCCcc--CCcccCcchhhhhcccccccCCCccccccccccccceecc
Confidence 56677777777777766566677777777777765532 2356666777777777665554444455666666666666
Q ss_pred CCccccCchhcccccchhhccCCCCccEEEcCCCCCCcccc----cccCCCCccEEe
Q 006695 272 TAITELPSSFANLEGLKDLYIGGSSLRQLNLSRNDSESLPA----SITQLSQLRSLH 324 (635)
Q Consensus 272 n~l~~lp~~~~~l~~L~~l~~~~~~L~~L~Ls~n~~~~lp~----~l~~l~~L~~L~ 324 (635)
|.|+.++. +. .+..+++|++|++++|.+..+|. .+..+++|+.||
T Consensus 97 N~i~~~~~-l~-------~l~~l~~L~~L~l~~N~i~~~~~~r~~~i~~lp~L~~LD 145 (162)
T d1a9na_ 97 NSLVELGD-LD-------PLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLD 145 (162)
T ss_dssp CCCCCGGG-GG-------GGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEET
T ss_pred cccccccc-cc-------ccccccccchhhcCCCccccccchHHHHHHHCCCcCeeC
Confidence 66665543 10 11334566666666666655553 245555555555
No 26
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.39 E-value=1.1e-13 Score=137.74 Aligned_cols=193 Identities=20% Similarity=0.279 Sum_probs=133.5
Q ss_pred eEEEcCCCCCccccccCCCCCCCcEEEccCCCCCCCC-CC-CCCCCCCCEEeecCCCCCcccCccccCCCCCCEEeecCC
Q 006695 80 VKLNLPYSKVVQIWEGKKRAFKLKYVDIHNSQYLIRM-PD-LSETPNLERTNLKNCINLTCVPSSVQNFNHLSMLCFEGC 157 (635)
Q Consensus 80 ~~L~L~~n~l~~l~~~~~~l~~L~~L~Ls~n~~~~~~-p~-l~~l~~L~~L~L~~n~~l~~~~~~i~~l~~L~~L~L~~~ 157 (635)
..+.++.+.+...........+|++|||++|.+.... +. +..+++|++|+|++|......+..++.+++|++|++++|
T Consensus 26 ~~lrl~~~~~~~~~~~~~~~~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls~c 105 (284)
T d2astb2 26 IAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGC 105 (284)
T ss_dssp SEEECTTCEECSCCCSCCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTC
T ss_pred eEeeccccccccchhhhccCCCCCEEECCCCccCHHHHHHHHHhCCCcccccccccCCCcHHHHHHhcCCCCcCcccccc
Confidence 3444444444433333445568888888888654322 22 677888889988888766666777888888899998888
Q ss_pred CCCCccC--CCC-CCCCCcEEecCCCCCCCcc------CcccCCcceEEeccc--ccc--ccCcccccCCCccEEEeecc
Q 006695 158 KSLRSFP--SNL-HFMSPIKIDFSSCFNLTEF------PQISGNITDLILSET--AIQ--EVPSSIECLTNLEKLYINRC 224 (635)
Q Consensus 158 ~~l~~lp--~~~-~l~~L~~L~l~~c~~l~~~------p~~~~~L~~L~L~~n--~i~--~lp~~~~~l~~L~~L~L~~n 224 (635)
..++... ... .+++|++|++++|..++.- ....++|+.|+++++ .++ .+...+.++++|++|++++|
T Consensus 106 ~~itd~~l~~l~~~~~~L~~L~ls~c~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~i~~~~l~~l~~~~~~L~~L~L~~~ 185 (284)
T d2astb2 106 SGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDS 185 (284)
T ss_dssp BSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTC
T ss_pred ccccccccchhhHHHHhccccccccccccccccchhhhcccccccchhhhcccccccccccccccccccccccccccccc
Confidence 7665321 111 5788888888888776532 122367888888864 333 23344567889999999987
Q ss_pred cc-cccchhcccCCCCCcEEecCCCCCC-CcchhhhcCCCCCCEEEecCC
Q 006695 225 MR-LKRLSTSICKLKSLHVLVLDDCSKL-ERFPEILEKMESVKCISLERT 272 (635)
Q Consensus 225 ~~-~~~lp~~~~~l~~L~~L~Ls~n~~~-~~~~~~l~~l~~L~~L~L~~n 272 (635)
.. .......+.++++|++|++++|... ......++.+++|+.|+++++
T Consensus 186 ~~itd~~~~~l~~~~~L~~L~L~~C~~i~~~~l~~L~~~~~L~~L~l~~~ 235 (284)
T d2astb2 186 VMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI 235 (284)
T ss_dssp TTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred cCCCchhhhhhcccCcCCEEECCCCCCCChHHHHHHhcCCCCCEEeeeCC
Confidence 64 4456667888999999999997543 444556788899999999887
No 27
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.34 E-value=2.9e-14 Score=151.03 Aligned_cols=344 Identities=14% Similarity=0.106 Sum_probs=180.7
Q ss_pred CCCcEEEeecCCCCCCcccceeeecCCcccCCCccceEeecCCCCCCC-----CCCCC-CCCCceEEEcCCCCCcc----
Q 006695 22 PNLRFLKFYMPEHNGVPIMISKVHLDQGLEYLPNELRYLHWHEYPSKA-----LPFDF-EPENLVKLNLPYSKVVQ---- 91 (635)
Q Consensus 22 ~~L~~L~L~~n~l~~~~~~~~~~~l~~~l~~l~~~L~~L~l~~~~l~~-----lp~~~-~l~~L~~L~L~~n~l~~---- 91 (635)
.+|+.|+++.|+++.. .+.+-+..+ .++++|++++|.+.. ++..+ ..++|++|+|++|.|+.
T Consensus 2 ~~l~~ld~~~~~i~~~-------~~~~l~~~l-~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~ 73 (460)
T d1z7xw1 2 LDIQSLDIQCEELSDA-------RWAELLPLL-QQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVH 73 (460)
T ss_dssp EEEEEEEEESCCCCHH-------HHHHHHHHH-TTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHH
T ss_pred CCCCEEEeeCCcCChH-------HHHHHHHhC-CCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCcCChHHHH
Confidence 3689999999988721 111112222 248889999887652 12222 56789999999988862
Q ss_pred -ccccCC-CCCCCcEEEccCCCCCCC----CC-CCCCCCCCCEEeecCCCCCccc----Ccccc-CCCCCCEEeecCCCC
Q 006695 92 -IWEGKK-RAFKLKYVDIHNSQYLIR----MP-DLSETPNLERTNLKNCINLTCV----PSSVQ-NFNHLSMLCFEGCKS 159 (635)
Q Consensus 92 -l~~~~~-~l~~L~~L~Ls~n~~~~~----~p-~l~~l~~L~~L~L~~n~~l~~~----~~~i~-~l~~L~~L~L~~~~~ 159 (635)
+.+.+. ...+|++|+|++|++... ++ .+..+++|++|++++|.....- ...+. ...............
T Consensus 74 ~l~~~l~~~~~~L~~L~L~~n~it~~~~~~l~~~l~~~~~L~~L~L~~N~i~~~~~~~l~~~l~~~~~~~~~~~~~~~~~ 153 (460)
T d1z7xw1 74 CVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSL 153 (460)
T ss_dssp HHHHTTCSTTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCC
T ss_pred HHHHHHhcCCCCCCEEECCCCCccccccccccchhhccccccccccccccchhhhhhhhhhccccccccccccccccccc
Confidence 333333 335789999998875432 12 3677888999998887543211 11111 111222232222111
Q ss_pred CCccC----CC-CCCCCCcEEecCCCCCCCc--------cCcccCCcceEEecccccccc-----CcccccCCCccEEEe
Q 006695 160 LRSFP----SN-LHFMSPIKIDFSSCFNLTE--------FPQISGNITDLILSETAIQEV-----PSSIECLTNLEKLYI 221 (635)
Q Consensus 160 l~~lp----~~-~~l~~L~~L~l~~c~~l~~--------~p~~~~~L~~L~L~~n~i~~l-----p~~~~~l~~L~~L~L 221 (635)
...-. .. .....++.+.++++..... +.........+.+..+.+... ...+...+.++.+++
T Consensus 154 ~~~~~~~~~~~l~~~~~~~~~~ls~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~ 233 (460)
T d1z7xw1 154 SAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELAL 233 (460)
T ss_dssp BGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEEC
T ss_pred chhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhcccccccccccccccch
Confidence 10000 00 0234556666665432211 011112345566655544321 122445667777777
Q ss_pred ecccccc-----cchhcccCCCCCcEEecCCCCCCCc----chhhhcCCCCCCEEEecCCCccccCchhcccccchhhcc
Q 006695 222 NRCMRLK-----RLSTSICKLKSLHVLVLDDCSKLER----FPEILEKMESVKCISLERTAITELPSSFANLEGLKDLYI 292 (635)
Q Consensus 222 ~~n~~~~-----~lp~~~~~l~~L~~L~Ls~n~~~~~----~~~~l~~l~~L~~L~L~~n~l~~lp~~~~~l~~L~~l~~ 292 (635)
.+|.... ...........|+.+++++|.+... ....+...+.++.+++++|.++... +..+. ..+..
T Consensus 234 ~~n~~~~~~~~~~~~~~~~~~~~l~~l~l~~n~i~~~~~~~~~~~l~~~~~l~~l~l~~n~i~~~~--~~~l~--~~l~~ 309 (460)
T d1z7xw1 234 GSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEG--ARLLC--ETLLE 309 (460)
T ss_dssp CSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHH--HHHHH--HHHTS
T ss_pred hhccccccccchhhcccccccccccccccccccccccccccccccccccccccccccccccccccc--cchhh--ccccc
Confidence 7765432 1223344566777777777765432 2234455677777777777765210 00000 01122
Q ss_pred CCCCccEEEcCCCCCCccc-----ccccCCCCccEEeccCCCCCC----cCC----CCCCccceecccccccc----ccc
Q 006695 293 GGSSLRQLNLSRNDSESLP-----ASITQLSQLRSLHLKDCSMLS----SLP----ELPQSLELLDAENCKQL----QFI 355 (635)
Q Consensus 293 ~~~~L~~L~Ls~n~~~~lp-----~~l~~l~~L~~L~L~~n~~l~----~lp----~l~~sL~~L~l~~c~~l----~~~ 355 (635)
....|+.+++++|.++... ..+...++|++|+|++|++.. .++ ...+.|++|++++|... ..+
T Consensus 310 ~~~~L~~l~l~~~~l~~~~~~~l~~~~~~~~~L~~L~Ls~N~i~~~g~~~l~~~l~~~~~~L~~L~Ls~n~i~~~~~~~l 389 (460)
T d1z7xw1 310 PGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSL 389 (460)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHH
T ss_pred cccccccccccccchhhhhhhhcccccccccchhhhheeeecccCcccchhhhhhhcccCCCCEEECCCCCCChHHHHHH
Confidence 3356777777777654321 223455667777777766532 122 22345777777777542 123
Q ss_pred CccccCccccchhhhhhhhhcc
Q 006695 356 PEILSGLEEVDASVLEKATFLN 377 (635)
Q Consensus 356 ~~~~~~L~~L~~l~L~~n~~~~ 377 (635)
+..+...++|+.|+|++|++..
T Consensus 390 ~~~l~~~~~L~~L~Ls~N~i~~ 411 (460)
T d1z7xw1 390 AATLLANHSLRELDLSNNCLGD 411 (460)
T ss_dssp HHHHHHCCCCCEEECCSSSCCH
T ss_pred HHHHhcCCCCCEEECCCCcCCH
Confidence 3445556667777777776643
No 28
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.33 E-value=3.1e-12 Score=110.21 Aligned_cols=105 Identities=16% Similarity=0.140 Sum_probs=67.4
Q ss_pred ceEEeccccccccCcccccCCCccEEEeecccccccchhcccCCCCCcEEecCCCCCCCcchhhhcCCCCCCEEEecCCC
Q 006695 194 TDLILSETAIQEVPSSIECLTNLEKLYINRCMRLKRLSTSICKLKSLHVLVLDDCSKLERFPEILEKMESVKCISLERTA 273 (635)
Q Consensus 194 ~~L~L~~n~i~~lp~~~~~l~~L~~L~L~~n~~~~~lp~~~~~l~~L~~L~Ls~n~~~~~~~~~l~~l~~L~~L~L~~n~ 273 (635)
+.|+|++|+|+.++. ++.+++|++|++++|.+. .+|..++.+++|+.|++++|.+.+ +| .+..+++|+.|++++|+
T Consensus 1 R~L~Ls~n~l~~l~~-l~~l~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~~-l~-~~~~l~~L~~L~l~~N~ 76 (124)
T d1dcea3 1 RVLHLAHKDLTVLCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNR 76 (124)
T ss_dssp SEEECTTSCCSSCCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSC
T ss_pred CEEEcCCCCCCCCcc-cccCCCCCEEECCCCccC-cchhhhhhhhcccccccccccccc-cC-ccccccccCeEECCCCc
Confidence 467788888887763 777777888888777664 455566777777777777766544 33 36667777777777777
Q ss_pred ccccCchhcccccchhhccCCCCccEEEcCCCCCCcc
Q 006695 274 ITELPSSFANLEGLKDLYIGGSSLRQLNLSRNDSESL 310 (635)
Q Consensus 274 l~~lp~~~~~l~~L~~l~~~~~~L~~L~Ls~n~~~~l 310 (635)
|+.+|.. ..+..+++|+.|++++|++..+
T Consensus 77 i~~~~~~--------~~l~~~~~L~~L~l~~N~i~~~ 105 (124)
T d1dcea3 77 LQQSAAI--------QPLVSCPRLVLLNLQGNSLCQE 105 (124)
T ss_dssp CCSSSTT--------GGGGGCTTCCEEECTTSGGGGS
T ss_pred cCCCCCc--------hhhcCCCCCCEEECCCCcCCcC
Confidence 6665531 0123345666666666665443
No 29
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.29 E-value=1.1e-12 Score=118.71 Aligned_cols=83 Identities=12% Similarity=0.021 Sum_probs=53.6
Q ss_pred CCCCceEEEcCCCCCccccccCCCCCCCcEEEccCCCCCCCCCCCCCCCCCCEEeecCCCCCcccCccccCCCCCCEEee
Q 006695 75 EPENLVKLNLPYSKVVQIWEGKKRAFKLKYVDIHNSQYLIRMPDLSETPNLERTNLKNCINLTCVPSSVQNFNHLSMLCF 154 (635)
Q Consensus 75 ~l~~L~~L~L~~n~l~~l~~~~~~l~~L~~L~Ls~n~~~~~~p~l~~l~~L~~L~L~~n~~l~~~~~~i~~l~~L~~L~L 154 (635)
++.+|++|+|++|+|+.++.....+++|+.|+|++|++. .++.+..+++|++|++++|......+..+..+++|+.|++
T Consensus 16 n~~~lr~L~L~~n~I~~i~~~~~~l~~L~~L~Ls~N~i~-~l~~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L~~L~L 94 (162)
T d1a9na_ 16 NAVRDRELDLRGYKIPVIENLGATLDQFDAIDFSDNEIR-KLDGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELIL 94 (162)
T ss_dssp CTTSCEEEECTTSCCCSCCCGGGGTTCCSEEECCSSCCC-EECCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEEC
T ss_pred CcCcCcEEECCCCCCCccCccccccccCCEEECCCCCCC-ccCCcccCcchhhhhcccccccCCCcccccccccccccee
Confidence 455677777777777777655566777777777777643 4466777777777777777443322223445666666666
Q ss_pred cCCC
Q 006695 155 EGCK 158 (635)
Q Consensus 155 ~~~~ 158 (635)
++|+
T Consensus 95 ~~N~ 98 (162)
T d1a9na_ 95 TNNS 98 (162)
T ss_dssp CSCC
T ss_pred cccc
Confidence 6543
No 30
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.29 E-value=2.6e-12 Score=110.72 Aligned_cols=99 Identities=14% Similarity=0.078 Sum_probs=58.2
Q ss_pred eeecCCCcccccChhhhcCCCCCcEEEeecCCCCCCcccceeeecCCcccCCCccceEeecCCCCCCCCCCCCCCCCceE
Q 006695 2 FLDLSKITSIHLSPQAFANMPNLRFLKFYMPEHNGVPIMISKVHLDQGLEYLPNELRYLHWHEYPSKALPFDFEPENLVK 81 (635)
Q Consensus 2 ~LdLs~n~~~~l~~~~f~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~~l~~l~~~L~~L~l~~~~l~~lp~~~~l~~L~~ 81 (635)
+|||++|++..++ .++++++|++|++++|.++ .+|.++..+++ |+.|++++|.++.+|....+++|++
T Consensus 2 ~L~Ls~n~l~~l~--~l~~l~~L~~L~ls~N~l~---------~lp~~~~~l~~-L~~L~l~~N~i~~l~~~~~l~~L~~ 69 (124)
T d1dcea3 2 VLHLAHKDLTVLC--HLEQLLLVTHLDLSHNRLR---------ALPPALAALRC-LEVLQASDNALENVDGVANLPRLQE 69 (124)
T ss_dssp EEECTTSCCSSCC--CGGGGTTCCEEECCSSCCC---------CCCGGGGGCTT-CCEEECCSSCCCCCGGGTTCSSCCE
T ss_pred EEEcCCCCCCCCc--ccccCCCCCEEECCCCccC---------cchhhhhhhhc-ccccccccccccccCccccccccCe
Confidence 5777777776664 3677777777777777766 34444544443 6666666666655554335555556
Q ss_pred EEcCCCCCcccc--ccCCCCCCCcEEEccCCCC
Q 006695 82 LNLPYSKVVQIW--EGKKRAFKLKYVDIHNSQY 112 (635)
Q Consensus 82 L~L~~n~l~~l~--~~~~~l~~L~~L~Ls~n~~ 112 (635)
|++++|+++.++ ..+..+++|+.|++++|++
T Consensus 70 L~l~~N~i~~~~~~~~l~~~~~L~~L~l~~N~i 102 (124)
T d1dcea3 70 LLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSL 102 (124)
T ss_dssp EECCSSCCCSSSTTGGGGGCTTCCEEECTTSGG
T ss_pred EECCCCccCCCCCchhhcCCCCCCEEECCCCcC
Confidence 666555555543 2345555555555555553
No 31
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=99.25 E-value=1.9e-12 Score=132.44 Aligned_cols=242 Identities=13% Similarity=0.128 Sum_probs=121.3
Q ss_pred CCCceEEEcCCCCCc-----cccccCCCCCCCcEEEccCCCCCCCC---C--------CCCCCCCCCEEeecCCCCCcc-
Q 006695 76 PENLVKLNLPYSKVV-----QIWEGKKRAFKLKYVDIHNSQYLIRM---P--------DLSETPNLERTNLKNCINLTC- 138 (635)
Q Consensus 76 l~~L~~L~L~~n~l~-----~l~~~~~~l~~L~~L~Ls~n~~~~~~---p--------~l~~l~~L~~L~L~~n~~l~~- 138 (635)
...|++|+|++|.+. .+-..+...++|+.|+++++...... + .+...++|+.|+|++|.....
T Consensus 30 ~~~l~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~ 109 (344)
T d2ca6a1 30 DDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTA 109 (344)
T ss_dssp CSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTT
T ss_pred CCCCCEEECcCCcCCHHHHHHHHHHHHhCCCCCEEECCCCcccccccccchHHHHHHHHHhhCCCccccccccccccccc
Confidence 456777788777664 34455667777888887776432211 1 134556677777776643322
Q ss_pred ---cCccccCCCCCCEEeecCCCCCCccCCCCCCCCCcEEecCCCCCCCccCcccCCcceEEecccccc-----ccCccc
Q 006695 139 ---VPSSVQNFNHLSMLCFEGCKSLRSFPSNLHFMSPIKIDFSSCFNLTEFPQISGNITDLILSETAIQ-----EVPSSI 210 (635)
Q Consensus 139 ---~~~~i~~l~~L~~L~L~~~~~l~~lp~~~~l~~L~~L~l~~c~~l~~~p~~~~~L~~L~L~~n~i~-----~lp~~~ 210 (635)
+...+...++|+.|++++|.....-...+ ...+..+.. .........|+.+.+++|.++ .+...+
T Consensus 110 ~~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~l-~~~l~~~~~------~~~~~~~~~L~~l~l~~n~i~~~~~~~l~~~l 182 (344)
T d2ca6a1 110 QEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKI-ARALQELAV------NKKAKNAPPLRSIICGRNRLENGSMKEWAKTF 182 (344)
T ss_dssp HHHHHHHHHHCTTCCEEECCSSCCHHHHHHHH-HHHHHHHHH------HHHHHTCCCCCEEECCSSCCTGGGHHHHHHHH
T ss_pred ccchhhhhcccccchheecccccccccccccc-ccccccccc------ccccccCcccceeecccccccccccccccchh
Confidence 22334455666666666653211000000 000000000 000011234555555555544 233335
Q ss_pred ccCCCccEEEeeccccccc-----chhcccCCCCCcEEecCCCCCCCc----chhhhcCCCCCCEEEecCCCccccC-ch
Q 006695 211 ECLTNLEKLYINRCMRLKR-----LSTSICKLKSLHVLVLDDCSKLER----FPEILEKMESVKCISLERTAITELP-SS 280 (635)
Q Consensus 211 ~~l~~L~~L~L~~n~~~~~-----lp~~~~~l~~L~~L~Ls~n~~~~~----~~~~l~~l~~L~~L~L~~n~l~~lp-~~ 280 (635)
...+.|+.|+|++|.+... +...+..+++|+.|+|++|.+... +...+..+++|++|++++|.|+.-. ..
T Consensus 183 ~~~~~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~l~~~~~L~~L~Ls~n~i~~~g~~~ 262 (344)
T d2ca6a1 183 QSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAA 262 (344)
T ss_dssp HHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHH
T ss_pred hhhhhhcccccccccccccccccchhhhhcchhhhcccccccccccccccccccccccccccchhhhhhcCccCchhhHH
Confidence 5566777777777765431 233455666777777777665332 3345566677777777777665311 00
Q ss_pred hcccccchhhc--cCCCCccEEEcCCCCCCc-----ccccc-cCCCCccEEeccCCCC
Q 006695 281 FANLEGLKDLY--IGGSSLRQLNLSRNDSES-----LPASI-TQLSQLRSLHLKDCSM 330 (635)
Q Consensus 281 ~~~l~~L~~l~--~~~~~L~~L~Ls~n~~~~-----lp~~l-~~l~~L~~L~L~~n~~ 330 (635)
+ -..+ ...+.|++|++++|+++. +...+ .++++|++|+|++|.+
T Consensus 263 l------~~~l~~~~~~~L~~L~ls~N~i~~~~~~~l~~~l~~~~~~L~~L~l~~N~~ 314 (344)
T d2ca6a1 263 V------VDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRF 314 (344)
T ss_dssp H------HHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBS
T ss_pred H------HHHhhhccCCCCCEEECCCCcCChHHHHHHHHHHHccCCCCCEEECCCCcC
Confidence 0 0111 123556777777776542 33333 2455666666666554
No 32
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=99.11 E-value=6.5e-13 Score=124.56 Aligned_cols=129 Identities=16% Similarity=0.220 Sum_probs=88.6
Q ss_pred cceEEeccc--cccccCcccccCCCccEEEeecccccccchhcccCCCCCcEEecCCCCCCCcchhhhcCCCCCCEEEec
Q 006695 193 ITDLILSET--AIQEVPSSIECLTNLEKLYINRCMRLKRLSTSICKLKSLHVLVLDDCSKLERFPEILEKMESVKCISLE 270 (635)
Q Consensus 193 L~~L~L~~n--~i~~lp~~~~~l~~L~~L~L~~n~~~~~lp~~~~~l~~L~~L~Ls~n~~~~~~~~~l~~l~~L~~L~L~ 270 (635)
++.+++.+. .++.+|.++..+++|++|+|++|.+.. ++ .+.++++|++|+|++|.+. .++.....+++|+.|+++
T Consensus 25 ~~~~~l~~~~~~i~~l~~sl~~L~~L~~L~Ls~n~I~~-i~-~l~~l~~L~~L~Ls~N~i~-~i~~~~~~~~~L~~L~l~ 101 (198)
T d1m9la_ 25 AEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWIS 101 (198)
T ss_dssp CSCEECCBCCTTCCCCHHHHHHTTTCCEEECSEEEESC-CC-CHHHHTTCCEEECCEEEEC-SCSSHHHHHHHCCEEECS
T ss_pred cceeeeecccCchhhhhhHHhcccccceeECcccCCCC-cc-cccCCccccChhhcccccc-cccccccccccccccccc
Confidence 344455443 456666777788888888888877653 33 4667778888888877653 445555556678888888
Q ss_pred CCCccccCchhcccccchhhccCCCCccEEEcCCCCCCcccc--cccCCCCccEEeccCCCCCCcCC
Q 006695 271 RTAITELPSSFANLEGLKDLYIGGSSLRQLNLSRNDSESLPA--SITQLSQLRSLHLKDCSMLSSLP 335 (635)
Q Consensus 271 ~n~l~~lp~~~~~l~~L~~l~~~~~~L~~L~Ls~n~~~~lp~--~l~~l~~L~~L~L~~n~~l~~lp 335 (635)
+|.|+.++. + ..+++|+.|++++|+++.++. .+..+++|+.|+|++|++....+
T Consensus 102 ~N~i~~l~~-~----------~~l~~L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~ 157 (198)
T d1m9la_ 102 YNQIASLSG-I----------EKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYK 157 (198)
T ss_dssp EEECCCHHH-H----------HHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSSHHHHHHC
T ss_pred ccccccccc-c----------cccccccccccccchhccccccccccCCCccceeecCCCccccCcc
Confidence 888877642 2 234678888888888887763 57788888888888877654433
No 33
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=99.05 E-value=7.1e-12 Score=127.99 Aligned_cols=68 Identities=6% Similarity=0.068 Sum_probs=37.5
Q ss_pred cccccCCCCCCCcEEEccCCCCCCCC-----CCCCCCCCCCEEeecCCCCCcc----------cCccccCCCCCCEEeec
Q 006695 91 QIWEGKKRAFKLKYVDIHNSQYLIRM-----PDLSETPNLERTNLKNCINLTC----------VPSSVQNFNHLSMLCFE 155 (635)
Q Consensus 91 ~l~~~~~~l~~L~~L~Ls~n~~~~~~-----p~l~~l~~L~~L~L~~n~~l~~----------~~~~i~~l~~L~~L~L~ 155 (635)
.+...+....+|+.|+|++|.+...- ..+...++|+.|+++++..... +...+...++|+.|+++
T Consensus 22 ~l~~~L~~~~~l~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~L~~L~L~ 101 (344)
T d2ca6a1 22 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLS 101 (344)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECC
T ss_pred HHHHHHhhCCCCCEEECcCCcCCHHHHHHHHHHHHhCCCCCEEECCCCcccccccccchHHHHHHHHHhhCCCccccccc
Confidence 34445566777888888887643211 1356667777777776532111 11223445556666665
Q ss_pred CCC
Q 006695 156 GCK 158 (635)
Q Consensus 156 ~~~ 158 (635)
+|.
T Consensus 102 ~n~ 104 (344)
T d2ca6a1 102 DNA 104 (344)
T ss_dssp SCC
T ss_pred ccc
Confidence 543
No 34
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.02 E-value=6.3e-10 Score=99.50 Aligned_cols=88 Identities=15% Similarity=0.103 Sum_probs=56.8
Q ss_pred cceEEeccccccccCcccccCCCccEEEeeccc-ccccchhcccCCCCCcEEecCCCCCCCcchhhhcCCCCCCEEEecC
Q 006695 193 ITDLILSETAIQEVPSSIECLTNLEKLYINRCM-RLKRLSTSICKLKSLHVLVLDDCSKLERFPEILEKMESVKCISLER 271 (635)
Q Consensus 193 L~~L~L~~n~i~~lp~~~~~l~~L~~L~L~~n~-~~~~lp~~~~~l~~L~~L~Ls~n~~~~~~~~~l~~l~~L~~L~L~~ 271 (635)
.+.++.+++++.++|..+..+++|++|++++++ +....+..|.++++|+.|+|++|.+....+.+|..+++|++|+|++
T Consensus 10 ~~~l~c~~~~~~~~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~ 89 (156)
T d2ifga3 10 SSGLRCTRDGALDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (156)
T ss_dssp SSCEECCSSCCCTTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred CCeEEecCCCCccCcccccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccccccccceeccC
Confidence 345666777777777777777777777776654 3333345566667777777776666555566666666666666666
Q ss_pred CCccccCch
Q 006695 272 TAITELPSS 280 (635)
Q Consensus 272 n~l~~lp~~ 280 (635)
|+|+.+|..
T Consensus 90 N~l~~l~~~ 98 (156)
T d2ifga3 90 NALESLSWK 98 (156)
T ss_dssp SCCSCCCST
T ss_pred CCCcccChh
Confidence 666666553
No 35
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=98.98 E-value=4.6e-12 Score=118.62 Aligned_cols=54 Identities=15% Similarity=0.070 Sum_probs=32.6
Q ss_pred ceEEEcCCC--CCccccccCCCCCCCcEEEccCCCCCCCCCCCCCCCCCCEEeecCC
Q 006695 79 LVKLNLPYS--KVVQIWEGKKRAFKLKYVDIHNSQYLIRMPDLSETPNLERTNLKNC 133 (635)
Q Consensus 79 L~~L~L~~n--~l~~l~~~~~~l~~L~~L~Ls~n~~~~~~p~l~~l~~L~~L~L~~n 133 (635)
++.+++.+. .++.++..+..+++|++|+|++|++. .++.+.++++|+.|+|++|
T Consensus 25 ~~~~~l~~~~~~i~~l~~sl~~L~~L~~L~Ls~n~I~-~i~~l~~l~~L~~L~Ls~N 80 (198)
T d1m9la_ 25 AEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIE-KISSLSGMENLRILSLGRN 80 (198)
T ss_dssp CSCEECCBCCTTCCCCHHHHHHTTTCCEEECSEEEES-CCCCHHHHTTCCEEECCEE
T ss_pred cceeeeecccCchhhhhhHHhcccccceeECcccCCC-CcccccCCccccChhhccc
Confidence 344444432 45566666667777777777777633 4455666666666666665
No 36
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.93 E-value=2.5e-09 Score=95.46 Aligned_cols=108 Identities=19% Similarity=0.143 Sum_probs=78.9
Q ss_pred CCCccEEEeecccccccchhcccCCCCCcEEecCCCCCCC-cchhhhcCCCCCCEEEecCCCccccCchhcccccchhhc
Q 006695 213 LTNLEKLYINRCMRLKRLSTSICKLKSLHVLVLDDCSKLE-RFPEILEKMESVKCISLERTAITELPSSFANLEGLKDLY 291 (635)
Q Consensus 213 l~~L~~L~L~~n~~~~~lp~~~~~l~~L~~L~Ls~n~~~~-~~~~~l~~l~~L~~L~L~~n~l~~lp~~~~~l~~L~~l~ 291 (635)
+...+.++.+++... ..|..+..+++|++|++++++.++ .-+..|.++++|+.|++++|+|+.++.. .+
T Consensus 7 c~~~~~l~c~~~~~~-~~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~---------~f 76 (156)
T d2ifga3 7 PHGSSGLRCTRDGAL-DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPD---------AF 76 (156)
T ss_dssp CSSSSCEECCSSCCC-TTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTT---------GG
T ss_pred cCCCCeEEecCCCCc-cCcccccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCcccc---------cc
Confidence 344556777765554 456667788888999988776444 4456788888888899888888888642 24
Q ss_pred cCCCCccEEEcCCCCCCcccccccCCCCccEEeccCCCC
Q 006695 292 IGGSSLRQLNLSRNDSESLPASITQLSQLRSLHLKDCSM 330 (635)
Q Consensus 292 ~~~~~L~~L~Ls~n~~~~lp~~l~~l~~L~~L~L~~n~~ 330 (635)
..+++|++|+|++|+++.+|..+....+|++|+|++|++
T Consensus 77 ~~l~~L~~L~Ls~N~l~~l~~~~~~~~~l~~L~L~~Np~ 115 (156)
T d2ifga3 77 HFTPRLSRLNLSFNALESLSWKTVQGLSLQELVLSGNPL 115 (156)
T ss_dssp GSCSCCCEEECCSSCCSCCCSTTTCSCCCCEEECCSSCC
T ss_pred cccccccceeccCCCCcccChhhhccccccccccCCCcc
Confidence 556888888888888888887665555788888888765
No 37
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.99 E-value=2.8e-07 Score=82.28 Aligned_cols=70 Identities=21% Similarity=0.238 Sum_probs=39.4
Q ss_pred hhcCCCCCCEEEecCCCccccCchhcccccchhhccCCCCccEEEcCCCCCCccccc-ccCCCCccEEeccCCCCCCc
Q 006695 257 ILEKMESVKCISLERTAITELPSSFANLEGLKDLYIGGSSLRQLNLSRNDSESLPAS-ITQLSQLRSLHLKDCSMLSS 333 (635)
Q Consensus 257 ~l~~l~~L~~L~L~~n~l~~lp~~~~~l~~L~~l~~~~~~L~~L~Ls~n~~~~lp~~-l~~l~~L~~L~L~~n~~l~~ 333 (635)
.+..+++|++|+|++|+|+.++.. ...+..+++|+.|+|++|.++++++. .....+|+.|++++|++...
T Consensus 60 ~~~~~~~L~~L~Ls~N~i~~l~~~-------~~~~~~l~~L~~L~Ls~N~i~~l~~l~~l~~~~L~~L~L~~Npl~~~ 130 (162)
T d1koha1 60 IEENIPELLSLNLSNNRLYRLDDM-------SSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSDT 130 (162)
T ss_dssp HHHHCTTCCCCCCCSSCCCCCSGG-------GTHHHHSTTCCCCCCTTSCCCCGGGHHHHTTCCCSSCCCTTSTTSSS
T ss_pred HHHhCCCCCEeeCCCccccCCchh-------HHHHhhCCcccccccccCccccchhhhhhhccccceeecCCCCcCcC
Confidence 344566666666666666655431 11223456666777777776666541 22334566677777666543
No 38
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.79 E-value=1e-06 Score=78.56 Aligned_cols=85 Identities=18% Similarity=0.157 Sum_probs=55.1
Q ss_pred hhcccCCCCCcEEecCCCCCCCc--chhhhcCCCCCCEEEecCCCccccCchhcccccchhhccCCCCccEEEcCCCCCC
Q 006695 231 STSICKLKSLHVLVLDDCSKLER--FPEILEKMESVKCISLERTAITELPSSFANLEGLKDLYIGGSSLRQLNLSRNDSE 308 (635)
Q Consensus 231 p~~~~~l~~L~~L~Ls~n~~~~~--~~~~l~~l~~L~~L~L~~n~l~~lp~~~~~l~~L~~l~~~~~~L~~L~Ls~n~~~ 308 (635)
+..+..+++|++|+|++|.+... ++..+..+++|+.|++++|.|++++.. . ......|+.|++++|.+.
T Consensus 58 ~~~~~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~l~~l-~--------~l~~~~L~~L~L~~Npl~ 128 (162)
T d1koha1 58 RIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSEREL-D--------KIKGLKLEELWLDGNSLS 128 (162)
T ss_dssp HHHHHHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCCGGGH-H--------HHTTCCCSSCCCTTSTTS
T ss_pred HHHHHhCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCccccchhh-h--------hhhccccceeecCCCCcC
Confidence 33344567777777777766543 345567778888888888888877641 1 123356788888888875
Q ss_pred cccc--------cccCCCCccEEe
Q 006695 309 SLPA--------SITQLSQLRSLH 324 (635)
Q Consensus 309 ~lp~--------~l~~l~~L~~L~ 324 (635)
.... .+..+|+|+.||
T Consensus 129 ~~~~~~~~y~~~i~~~~P~L~~LD 152 (162)
T d1koha1 129 DTFRDQSTYISAIRERFPKLLRLD 152 (162)
T ss_dssp SSSSSHHHHHHHHHTTSTTCCEET
T ss_pred cCcccchhHHHHHHHHCCCCCEEC
Confidence 4321 246788888876
No 39
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=97.44 E-value=8e-05 Score=66.09 Aligned_cols=42 Identities=19% Similarity=0.385 Sum_probs=19.7
Q ss_pred ccCCCCCcEEecCCCCCCC----cchhhhcCCCCCCEEEecCCCcc
Q 006695 234 ICKLKSLHVLVLDDCSKLE----RFPEILEKMESVKCISLERTAIT 275 (635)
Q Consensus 234 ~~~l~~L~~L~Ls~n~~~~----~~~~~l~~l~~L~~L~L~~n~l~ 275 (635)
+...+.|++|+|++|.+.. .+.+.+...+.|++|+|++|.|+
T Consensus 40 L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~ 85 (167)
T d1pgva_ 40 ACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLT 85 (167)
T ss_dssp HTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCC
T ss_pred HhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcc
Confidence 4444555555555554432 12233344455555555555444
No 40
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=97.32 E-value=7.1e-05 Score=66.45 Aligned_cols=114 Identities=11% Similarity=0.054 Sum_probs=67.6
Q ss_pred CCcceEEeccc-ccc-----ccCcccccCCCccEEEeeccccccc----chhcccCCCCCcEEecCCCCCCCc----chh
Q 006695 191 GNITDLILSET-AIQ-----EVPSSIECLTNLEKLYINRCMRLKR----LSTSICKLKSLHVLVLDDCSKLER----FPE 256 (635)
Q Consensus 191 ~~L~~L~L~~n-~i~-----~lp~~~~~l~~L~~L~L~~n~~~~~----lp~~~~~l~~L~~L~Ls~n~~~~~----~~~ 256 (635)
++|++|+|+++ .++ .+-..+...+.|++|+|++|.+... +...+...+.|++|+|++|.+... +-.
T Consensus 15 ~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~l~~ 94 (167)
T d1pgva_ 15 TDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLR 94 (167)
T ss_dssp SSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHH
T ss_pred CCCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHHHHHH
Confidence 34566666542 343 1223456667788888888876532 334455678888999988876543 334
Q ss_pred hhcCCCCCCEEEecCCCccccCchhcccccchhhccCCCCccEEEcCCCC
Q 006695 257 ILEKMESVKCISLERTAITELPSSFANLEGLKDLYIGGSSLRQLNLSRND 306 (635)
Q Consensus 257 ~l~~l~~L~~L~L~~n~l~~lp~~~~~l~~L~~l~~~~~~L~~L~Ls~n~ 306 (635)
.+...++|++|++++|.+..+.... ...+...+...++|+.|+++.+.
T Consensus 95 aL~~n~sL~~L~l~~n~~~~~g~~~--~~~l~~~L~~n~sL~~l~l~~~~ 142 (167)
T d1pgva_ 95 STLVTQSIVEFKADNQRQSVLGNQV--EMDMMMAIEENESLLRVGISFAS 142 (167)
T ss_dssp HTTTTCCCSEEECCCCSSCCCCHHH--HHHHHHHHHHCSSCCEEECCCCC
T ss_pred HHHhCCcCCEEECCCCcCCCccHHH--HHHHHHHHHhCCCccEeeCcCCC
Confidence 5666777888888887766543211 11122333445666777666554
No 41
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=96.50 E-value=0.00083 Score=59.04 Aligned_cols=64 Identities=14% Similarity=0.181 Sum_probs=29.9
Q ss_pred cCCCccEEEeeccc-ccc----cchhcccCCCCCcEEecCCCCCCCc----chhhhcCCCCCCEEEecCCCcc
Q 006695 212 CLTNLEKLYINRCM-RLK----RLSTSICKLKSLHVLVLDDCSKLER----FPEILEKMESVKCISLERTAIT 275 (635)
Q Consensus 212 ~l~~L~~L~L~~n~-~~~----~lp~~~~~l~~L~~L~Ls~n~~~~~----~~~~l~~l~~L~~L~L~~n~l~ 275 (635)
+.++|++|++++++ +.. .+-..+...++|++|++++|.+... +...+...++++.+++++|.++
T Consensus 15 ~~~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~ 87 (166)
T d1io0a_ 15 NDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFIS 87 (166)
T ss_dssp TCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCC
T ss_pred cCCCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhcccccc
Confidence 34555666665532 211 1223344555556666665544322 2223344455555555555544
No 42
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=96.05 E-value=0.0018 Score=56.79 Aligned_cols=111 Identities=11% Similarity=0.114 Sum_probs=61.2
Q ss_pred CCcceEEecc-cccc-----ccCcccccCCCccEEEeeccccccc----chhcccCCCCCcEEecCCCCCCCc----chh
Q 006695 191 GNITDLILSE-TAIQ-----EVPSSIECLTNLEKLYINRCMRLKR----LSTSICKLKSLHVLVLDDCSKLER----FPE 256 (635)
Q Consensus 191 ~~L~~L~L~~-n~i~-----~lp~~~~~l~~L~~L~L~~n~~~~~----lp~~~~~l~~L~~L~Ls~n~~~~~----~~~ 256 (635)
++|++|++++ +.|+ .+-..+...+.|++|++++|.+... +...+...++++.+++++|.+... +..
T Consensus 17 ~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~~~l~~ 96 (166)
T d1io0a_ 17 PDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVE 96 (166)
T ss_dssp TTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHH
T ss_pred CCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccccchhHHHHHH
Confidence 3455555554 3343 2333455677888888888876433 334455678888888888776543 334
Q ss_pred hhcCCCCCCEEEec--CCCccccCchhcccccchhhccCCCCccEEEcCCCC
Q 006695 257 ILEKMESVKCISLE--RTAITELPSSFANLEGLKDLYIGGSSLRQLNLSRND 306 (635)
Q Consensus 257 ~l~~l~~L~~L~L~--~n~l~~lp~~~~~l~~L~~l~~~~~~L~~L~Ls~n~ 306 (635)
.+...++|+.++|+ +|.+..- . ...|...+...+.|+.|+++.+.
T Consensus 97 ~l~~~~~L~~l~L~l~~n~i~~~--~---~~~La~~L~~n~~L~~L~l~~~~ 143 (166)
T d1io0a_ 97 ALQSNTSLIELRIDNQSQPLGNN--V---EMEIANMLEKNTTLLKFGYHFTQ 143 (166)
T ss_dssp GGGGCSSCCEEECCCCSSCCCHH--H---HHHHHHHHHHCSSCCEEECCCSS
T ss_pred HHHhCccccEEeeccCCCcCcHH--H---HHHHHHHHHhCCCcCEEeCcCCC
Confidence 55667777766554 3444320 0 01112222344566666665543
Done!