BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006696
(635 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 169 bits (428), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 113/347 (32%), Positives = 183/347 (52%), Gaps = 22/347 (6%)
Query: 303 RSEKPKEEFGS--GVQEPEKNKLVFFEGCSYNFDLEDLLRAS-----AEVLGKGSYGTAY 355
R +KP++ F ++PE + G F L +L AS +LG+G +G Y
Sbjct: 1 RRKKPQDHFFDVPAEEDPEVHL-----GQLKRFSLRELQVASDNFSNKNILGRGGFGKVY 55
Query: 356 KAVLEESTTXXXXXXXXXXXXXRDFEQQMEI-VGRVGQHPNVVPLRAYYYSKDEKLLVYD 414
K L + T + + Q E+ + + H N++ LR + + E+LLVY
Sbjct: 56 KGRLADGTLVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 115
Query: 415 YFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVL 474
Y A+GS+++ L R + PLDW R +I LG+ARG+A++H PK H ++KA+N+L
Sbjct: 116 YMANGSVASCLR-ERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANIL 174
Query: 475 INQDLDGCISDFGLTPLMN-----VPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLL 529
++++ + + DFGL LM+ V + G+ APE + T K S K+DV+ +GV+LL
Sbjct: 175 LDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLL 234
Query: 530 EMLTGKAP--LQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIG 587
E++TG+ L DD V L WV+ +++E+ + DV+L + +EE+ Q++Q+
Sbjct: 235 ELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDL-QGNYKDEEVEQLIQVA 293
Query: 588 MACVAKVPDMRPNMDEVVRMIEEVRQSDSENRPSSEENKSKDSNVQT 634
+ C P RP M EVVRM+E ++ EE +D N T
Sbjct: 294 LLCTQSSPMERPKMSEVVRMLEGDGLAERWEEWQKEEMFRQDFNYPT 340
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 166 bits (419), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 94/273 (34%), Positives = 153/273 (56%), Gaps = 10/273 (3%)
Query: 345 VLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEI-VGRVGQHPNVVPLRAYY 403
+LG+G +G YK L + + + Q E+ + + H N++ LR +
Sbjct: 37 ILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFC 96
Query: 404 YSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKF 463
+ E+LLVY Y A+GS+++ L R + PLDW R +I LG+ARG+A++H PK
Sbjct: 97 MTPTERLLVYPYMANGSVASCLR-ERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKI 155
Query: 464 THGNIKASNVLINQDLDGCISDFGLTPLMN-----VPATPSRSAGYRAPEVIETRKHSHK 518
H ++KA+N+L++++ + + DFGL LM+ V G+ APE + T K S K
Sbjct: 156 IHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXIGHIAPEYLSTGKSSEK 215
Query: 519 SDVYSFGVLLLEMLTGKAP--LQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNI 576
+DV+ +GV+LLE++TG+ L DD V L WV+ +++E+ + DV+L +
Sbjct: 216 TDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDL-QGNYK 274
Query: 577 EEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIE 609
+EE+ Q++Q+ + C P RP M EVVRM+E
Sbjct: 275 DEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 307
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 135/294 (45%), Gaps = 20/294 (6%)
Query: 323 LVFFEGCSYNFDLEDLLRASAEVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQ 382
LV E + NFD + L+ G G +G YK VL + + +
Sbjct: 31 LVDLEEATNNFDHKFLI-------GHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFE 83
Query: 383 QMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRV 442
+HP++V L + ++E +L+Y Y +G+L L+G+ + WE R+
Sbjct: 84 TEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGS-DLPTMSMSWEQRL 142
Query: 443 KILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTP------LMNVPA 496
+I +G ARG+ ++H+ H ++K+ N+L++++ I+DFG++ ++
Sbjct: 143 EICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXX 199
Query: 497 TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSV 556
+ GY PE + + KSDVYSFGV+L E+L ++ + +MV+L W
Sbjct: 200 VVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVES 259
Query: 557 VREEWTAEVFDVELMRFQNIEEEMVQML-QIGMACVAKVPDMRPNMDEVVRMIE 609
++ D L I E ++ + C+A + RP+M +V+ +E
Sbjct: 260 HNNGQLEQIVDPNLA--DKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 135/294 (45%), Gaps = 20/294 (6%)
Query: 323 LVFFEGCSYNFDLEDLLRASAEVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQ 382
LV E + NFD + L+ G G +G YK VL + + +
Sbjct: 31 LVDLEEATNNFDHKFLI-------GHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFE 83
Query: 383 QMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRV 442
+HP++V L + ++E +L+Y Y +G+L L+G+ + WE R+
Sbjct: 84 TEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGS-DLPTMSMSWEQRL 142
Query: 443 KILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTP------LMNVPA 496
+I +G ARG+ ++H+ H ++K+ N+L++++ I+DFG++ ++
Sbjct: 143 EICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXX 199
Query: 497 TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSV 556
+ GY PE + + KSDVYSFGV+L E+L ++ + +MV+L W
Sbjct: 200 VVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVES 259
Query: 557 VREEWTAEVFDVELMRFQNIEEEMVQML-QIGMACVAKVPDMRPNMDEVVRMIE 609
++ D L I E ++ + C+A + RP+M +V+ +E
Sbjct: 260 HNNGQLEQIVDPNLA--DKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 139/302 (46%), Gaps = 23/302 (7%)
Query: 325 FFE--GCSYNFDLEDLLRASAEVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRD--- 379
F+E + NFD E + +G+G +G YK + +T +
Sbjct: 17 FYELKNVTNNFD-ERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQ 75
Query: 380 -FEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDW 438
F+Q+++++ + QH N+V L + D+ LVY Y +GSL L G PL W
Sbjct: 76 QFDQEIKVMAKC-QHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT--PPLSW 132
Query: 439 ETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATP 498
R KI G A G+ +H H +IK++N+L+++ ISDFGL A
Sbjct: 133 HMRCKIAQGAANGINFLHE---NHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQT 189
Query: 499 ---SRSAG---YRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRW 552
SR G Y APE + + KSD+YSFGV+LLE++TG P R+ + L
Sbjct: 190 VMXSRIVGTTAYMAPEALRGEI-TPKSDIYSFGVVLLEIITG-LPAVDEHREPQLLLDIK 247
Query: 553 VQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVR 612
+ E+ + D ++ + E M + C+ + + RP++ +V ++++E+
Sbjct: 248 EEIEDEEKTIEDYIDKKMNDADSTSVE--AMYSVASQCLHEKKNKRPDIKKVQQLLQEMT 305
Query: 613 QS 614
S
Sbjct: 306 AS 307
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 137/302 (45%), Gaps = 23/302 (7%)
Query: 325 FFE--GCSYNFDLEDLLRASAEVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRD--- 379
F+E + NFD E + +G+G +G YK + +T +
Sbjct: 17 FYELKNVTNNFD-ERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQ 75
Query: 380 -FEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDW 438
F+Q+++++ + QH N+V L + D+ LVY Y +GSL L G PL W
Sbjct: 76 QFDQEIKVMAKC-QHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT--PPLSW 132
Query: 439 ETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATP 498
R KI G A G+ +H H +IK++N+L+++ ISDFGL A
Sbjct: 133 HMRCKIAQGAANGINFLHE---NHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQT 189
Query: 499 SR------SAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRW 552
+ Y APE + + KSD+YSFGV+LLE++TG P R+ + L
Sbjct: 190 VMXXRIVGTTAYMAPEALRGEI-TPKSDIYSFGVVLLEIITG-LPAVDEHREPQLLLDIK 247
Query: 553 VQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVR 612
+ E+ + D ++ + E M + C+ + + RP++ +V ++++E+
Sbjct: 248 EEIEDEEKTIEDYIDKKMNDADSTSVE--AMYSVASQCLHEKKNKRPDIKKVQQLLQEMT 305
Query: 613 QS 614
S
Sbjct: 306 AS 307
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 137/302 (45%), Gaps = 23/302 (7%)
Query: 325 FFE--GCSYNFDLEDLLRASAEVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRD--- 379
F+E + NFD E + +G+G +G YK + +T +
Sbjct: 11 FYELKNVTNNFD-ERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQ 69
Query: 380 -FEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDW 438
F+Q+++++ + QH N+V L + D+ LVY Y +GSL L G PL W
Sbjct: 70 QFDQEIKVMAKC-QHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT--PPLSW 126
Query: 439 ETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATP 498
R KI G A G+ +H H +IK++N+L+++ ISDFGL A
Sbjct: 127 HMRCKIAQGAANGINFLHE---NHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQX 183
Query: 499 SR------SAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRW 552
+ Y APE + + KSD+YSFGV+LLE++TG P R+ + L
Sbjct: 184 VMXXRIVGTTAYMAPEALRGEI-TPKSDIYSFGVVLLEIITG-LPAVDEHREPQLLLDIK 241
Query: 553 VQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVR 612
+ E+ + D ++ + E M + C+ + + RP++ +V ++++E+
Sbjct: 242 EEIEDEEKTIEDYIDKKMNDADSTSVE--AMYSVASQCLHEKKNKRPDIKKVQQLLQEMT 299
Query: 613 QS 614
S
Sbjct: 300 AS 301
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 100/200 (50%), Gaps = 10/200 (5%)
Query: 344 EVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXR--DFEQQMEIVGRVGQHPNVVPLRA 401
E +G GS+GT ++A S R +F +++ I+ R+ +HPN+V
Sbjct: 43 EKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRL-RHPNIVLFMG 101
Query: 402 YYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGP 461
+V +Y + GSL LLH + R LD R+ + A+G+ ++H+ P
Sbjct: 102 AVTQPPNLSIVTEYLSRGSLYRLLH--KSGAREQLDERRRLSMAYDVAKGMNYLHNRN-P 158
Query: 462 KFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG----YRAPEVIETRKHSH 517
H N+K+ N+L+++ + DFGL+ L S+SA + APEV+ +
Sbjct: 159 PIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNE 218
Query: 518 KSDVYSFGVLLLEMLTGKAP 537
KSDVYSFGV+L E+ T + P
Sbjct: 219 KSDVYSFGVILWELATLQQP 238
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 132/301 (43%), Gaps = 21/301 (6%)
Query: 325 FFE--GCSYNFDLEDLLRASAEVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQ 382
F+E + NFD E + G+G +G YK + +T + +Q
Sbjct: 8 FYELKNVTNNFD-ERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQ 66
Query: 383 QMEIVGRVG---QHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWE 439
Q + +V QH N+V L + D+ LVY Y +GSL L G PL W
Sbjct: 67 QFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGT--PPLSWH 124
Query: 440 TRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA--- 496
R KI G A G+ +H H +IK++N+L+++ ISDFGL A
Sbjct: 125 XRCKIAQGAANGINFLHE---NHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXV 181
Query: 497 TPSRSAG---YRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWV 553
SR G Y APE + + KSD+YSFGV+LLE++TG P R+ + L
Sbjct: 182 XXSRIVGTTAYXAPEALRGEI-TPKSDIYSFGVVLLEIITG-LPAVDEHREPQLLLDIKE 239
Query: 554 QSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQ 613
+ E+ + D + + E + C+ + + RP++ +V ++++E
Sbjct: 240 EIEDEEKTIEDYIDKKXNDADSTSVEA--XYSVASQCLHEKKNKRPDIKKVQQLLQEXTA 297
Query: 614 S 614
S
Sbjct: 298 S 298
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 99/200 (49%), Gaps = 10/200 (5%)
Query: 344 EVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXR--DFEQQMEIVGRVGQHPNVVPLRA 401
E +G GS+GT ++A S R +F +++ I+ R+ +HPN+V
Sbjct: 43 EKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRL-RHPNIVLFMG 101
Query: 402 YYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGP 461
+V +Y + GSL LLH + R LD R+ + A+G+ ++H+ P
Sbjct: 102 AVTQPPNLSIVTEYLSRGSLYRLLH--KSGAREQLDERRRLSMAYDVAKGMNYLHNRN-P 158
Query: 462 KFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG----YRAPEVIETRKHSH 517
H ++K+ N+L+++ + DFGL+ L S+ A + APEV+ +
Sbjct: 159 PIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTPEWMAPEVLRDEPSNE 218
Query: 518 KSDVYSFGVLLLEMLTGKAP 537
KSDVYSFGV+L E+ T + P
Sbjct: 219 KSDVYSFGVILWELATLQQP 238
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 116/242 (47%), Gaps = 33/242 (13%)
Query: 378 RDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLD 437
RDF + I+G+ HPN++ L ++V +Y +GSL T L N G
Sbjct: 68 RDFLGEASIMGQF-DHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVI-- 124
Query: 438 WETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM-NVPA 496
V +L G + G+ ++ MG + H ++ A N+LIN +L +SDFGL+ ++ + P
Sbjct: 125 --QLVGMLRGISAGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPE 179
Query: 497 TPSRSAG------YRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDL 549
+ G + APE I RK + SDV+S+G+++ E+++ G+ P T D++
Sbjct: 180 AAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVI-- 237
Query: 550 PRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIE 609
V E + R + + + Q+ + C K + RP DE+V M++
Sbjct: 238 -----KAVEEGY----------RLPSPMDCPAALYQLMLDCWQKERNSRPKFDEIVNMLD 282
Query: 610 EV 611
++
Sbjct: 283 KL 284
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 95/212 (44%), Gaps = 25/212 (11%)
Query: 344 EVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQ------HPNVV 397
E++G G +G Y+A D Q +E V + + HPN++
Sbjct: 13 EIIGIGGFGKVYRAFW---IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNII 69
Query: 398 PLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHS 457
LR + LV ++ G L+ +L G R ++W ++ ARG+ ++H
Sbjct: 70 ALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQI------ARGMNYLHD 123
Query: 458 MGGPKFTHGNIKASNVLINQDLDGC--------ISDFGLTPLMNVPATPSRSAGY--RAP 507
H ++K+SN+LI Q ++ I+DFGL + S + Y AP
Sbjct: 124 EAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAGAYAWMAP 183
Query: 508 EVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQ 539
EVI S SDV+S+GVLL E+LTG+ P +
Sbjct: 184 EVIRASMFSKGSDVWSYGVLLWELLTGEVPFR 215
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 125/272 (45%), Gaps = 34/272 (12%)
Query: 344 EVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAYY 403
EV+G+G++G KA + + F ++ + RV HPN+V L Y
Sbjct: 15 EVVGRGAFGVVCKA--KWRAKDVAIKQIESESERKAFIVELRQLSRV-NHPNIVKL--YG 69
Query: 404 YSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKIL---LGTARGVAHIHSMGG 460
+ LV +Y GSL +LHG PL + T + L ++GVA++HSM
Sbjct: 70 ACLNPVCLVMEYAEGGSLYNVLHGAE-----PLPYYTAAHAMSWCLQCSQGVAYLHSMQP 124
Query: 461 PKFTHGNIKASNVLI---NQDLDGCISDFGLTPLMNVPATPSR-SAGYRAPEVIETRKHS 516
H ++K N+L+ L C DFG + T ++ SA + APEV E +S
Sbjct: 125 KALIHRDLKPPNLLLVAGGTVLKIC--DFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYS 182
Query: 517 HKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNI 576
K DV+S+G++L E++T + P D + P R W + +N+
Sbjct: 183 EKCDVFSWGIILWEVITRRKPF------DEIGGP-----AFRIMWAVHNGTRPPL-IKNL 230
Query: 577 EEEMVQMLQIGMACVAKVPDMRPNMDEVVRMI 608
+ + ++ C +K P RP+M+E+V+++
Sbjct: 231 PKPIESLMT---RCWSKDPSQRPSMEEIVKIM 259
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 124/270 (45%), Gaps = 30/270 (11%)
Query: 344 EVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAYY 403
EV+G+G++G KA + + F ++ + RV HPN+V L Y
Sbjct: 14 EVVGRGAFGVVCKA--KWRAKDVAIKQIESESERKAFIVELRQLSRV-NHPNIVKL--YG 68
Query: 404 YSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKIL---LGTARGVAHIHSMGG 460
+ LV +Y GSL +LHG PL + T + L ++GVA++HSM
Sbjct: 69 ACLNPVCLVMEYAEGGSLYNVLHGAE-----PLPYYTAAHAMSWCLQCSQGVAYLHSMQP 123
Query: 461 PKFTHGNIKASNVLINQDLDGC-ISDFGLTPLMNVPATPSR-SAGYRAPEVIETRKHSHK 518
H ++K N+L+ I DFG + T ++ SA + APEV E +S K
Sbjct: 124 KALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEK 183
Query: 519 SDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNIEE 578
DV+S+G++L E++T + P D + P R W + +N+ +
Sbjct: 184 CDVFSWGIILWEVITRRKPF------DEIGGP-----AFRIMWAVHNGTRPPL-IKNLPK 231
Query: 579 EMVQMLQIGMACVAKVPDMRPNMDEVVRMI 608
+ ++ C +K P RP+M+E+V+++
Sbjct: 232 PIESLMT---RCWSKDPSQRPSMEEIVKIM 258
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 93/182 (51%), Gaps = 20/182 (10%)
Query: 378 RDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLD 437
RDF + I+G+ HPNV+ L +++ ++ +GSL + L N G
Sbjct: 79 RDFLSEASIMGQF-DHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDG------- 130
Query: 438 WETRVKILLGTARGVAH-IHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM---- 492
+ V L+G RG+A + + + H ++ A N+L+N +L +SDFGL+ +
Sbjct: 131 -QFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDT 189
Query: 493 NVPATPSRSAG-----YRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDM 546
+ P S G + APE I+ RK + SDV+S+G+++ E+++ G+ P T D+
Sbjct: 190 SDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDV 249
Query: 547 VD 548
++
Sbjct: 250 IN 251
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 101/209 (48%), Gaps = 23/209 (11%)
Query: 344 EVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQ-MEIVGRVG-----QHPNVV 397
+V+G G +G YK +L+ S+ E+Q ++ +G G H N++
Sbjct: 50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNII 109
Query: 398 PLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAH-IH 456
L +++ +Y +G+L L G E V L+G RG+A +
Sbjct: 110 RLEGVISKYKPMMIITEYMENGALDKFLREKDG--------EFSVLQLVGMLRGIAAGMK 161
Query: 457 SMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM--NVPATPSRSAG-----YRAPEV 509
+ + H ++ A N+L+N +L +SDFGL+ ++ + AT + S G + APE
Sbjct: 162 YLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEA 221
Query: 510 IETRKHSHKSDVYSFGVLLLEMLT-GKAP 537
I RK + SDV+SFG+++ E++T G+ P
Sbjct: 222 ISYRKFTSASDVWSFGIVMWEVMTYGERP 250
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 102/198 (51%), Gaps = 12/198 (6%)
Query: 344 EVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAYY 403
E LG+GSYG+ YKA+ +E+ ++ +++ I+ + P+VV Y
Sbjct: 35 EKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDS-PHVVKYYGSY 93
Query: 404 YSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKF 463
+ + +V +Y +GS+S ++ R +T L + IL T +G+ ++H M +
Sbjct: 94 FKNTDLWIVMEYCGAGSVSDII---RLRNKT-LTEDEIATILQSTLKGLEYLHFM---RK 146
Query: 464 THGNIKASNVLINQDLDGCISDFGLT-PLMNVPATPSRSAG---YRAPEVIETRKHSHKS 519
H +IKA N+L+N + ++DFG+ L + A + G + APEVI+ ++ +
Sbjct: 147 IHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNCVA 206
Query: 520 DVYSFGVLLLEMLTGKAP 537
D++S G+ +EM GK P
Sbjct: 207 DIWSLGITAIEMAEGKPP 224
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 97/211 (45%), Gaps = 30/211 (14%)
Query: 343 AEVLGKGSYGTAYKAVLEES--TTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLR 400
EVLGKG +G A K E+ R F ++++++ R +HPNV+
Sbjct: 15 GEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVM-RCLEHPNVLKFI 73
Query: 401 AYYYSKDEKL-LVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMG 459
Y KD++L + +Y G+L ++ + + W RV A G+A++HSM
Sbjct: 74 GVLY-KDKRLNFITEYIKGGTLRGIIK----SMDSQYPWSQRVSFAKDIASGMAYLHSMN 128
Query: 460 GPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPAT----------PSRSAGYR---- 505
H ++ + N L+ ++ + ++DFGL LM T P R Y
Sbjct: 129 ---IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGN 185
Query: 506 ----APEVIETRKHSHKSDVYSFGVLLLEML 532
APE+I R + K DV+SFG++L E++
Sbjct: 186 PYWMAPEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 92/182 (50%), Gaps = 20/182 (10%)
Query: 378 RDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLD 437
RDF + I+G+ HPNV+ L +++ ++ +GSL + L N G
Sbjct: 53 RDFLSEASIMGQF-DHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDG------- 104
Query: 438 WETRVKILLGTARGVAH-IHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM---- 492
+ V L+G RG+A + + + H + A N+L+N +L +SDFGL+ +
Sbjct: 105 -QFTVIQLVGMLRGIAAGMKYLADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDT 163
Query: 493 NVPATPSRSAG-----YRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDM 546
+ P S G + APE I+ RK + SDV+S+G+++ E+++ G+ P T D+
Sbjct: 164 SDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDV 223
Query: 547 VD 548
++
Sbjct: 224 IN 225
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 103/218 (47%), Gaps = 22/218 (10%)
Query: 344 EVLGKGSYGTAYKAVL------EESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVV 397
+V+G G +G L E S RDF + I+G+ HPN++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF-DHPNII 109
Query: 398 PLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHS 457
L ++V +Y +GSL + L A T + V +L G A G+ ++
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQ---LVGMLRGIASGMKYLSD 165
Query: 458 MGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM-NVPATPSRSAG------YRAPEVI 510
MG F H ++ A N+LIN +L +SDFGL+ ++ + P + G + +PE I
Sbjct: 166 MG---FVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 511 ETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMV 547
RK + SDV+S+G++L E+++ G+ P + D++
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI 260
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 103/218 (47%), Gaps = 22/218 (10%)
Query: 344 EVLGKGSYGTAYKAVL------EESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVV 397
+V+G G +G L E S RDF + I+G+ HPN++
Sbjct: 39 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF-DHPNII 97
Query: 398 PLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHS 457
L ++V +Y +GSL + L A T + V +L G A G+ ++
Sbjct: 98 RLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQ---LVGMLRGIASGMKYLSD 153
Query: 458 MGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM-NVPATPSRSAG------YRAPEVI 510
MG + H ++ A N+LIN +L +SDFGL+ ++ + P + G + +PE I
Sbjct: 154 MG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 210
Query: 511 ETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMV 547
RK + SDV+S+G++L E+++ G+ P + D++
Sbjct: 211 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI 248
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 103/218 (47%), Gaps = 22/218 (10%)
Query: 344 EVLGKGSYGTAYKAVL------EESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVV 397
+V+G G +G L E S RDF + I+G+ HPN++
Sbjct: 22 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF-DHPNII 80
Query: 398 PLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHS 457
L ++V +Y +GSL + L A T + V +L G A G+ ++
Sbjct: 81 RLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQ---LVGMLRGIASGMKYLSD 136
Query: 458 MGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM-NVPATPSRSAG------YRAPEVI 510
MG + H ++ A N+LIN +L +SDFGL+ ++ + P + G + +PE I
Sbjct: 137 MG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 193
Query: 511 ETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMV 547
RK + SDV+S+G++L E+++ G+ P + D++
Sbjct: 194 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI 231
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 103/218 (47%), Gaps = 22/218 (10%)
Query: 344 EVLGKGSYGTAYKAVL------EESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVV 397
+V+G G +G L E S RDF + I+G+ HPN++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF-DHPNII 109
Query: 398 PLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHS 457
L ++V +Y +GSL + L A T + V +L G A G+ ++
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQ---LVGMLRGIASGMKYLSD 165
Query: 458 MGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM-NVPATPSRSAG------YRAPEVI 510
MG + H ++ A N+LIN +L +SDFGL+ ++ + P + G + +PE I
Sbjct: 166 MG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 511 ETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMV 547
RK + SDV+S+G++L E+++ G+ P + D++
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI 260
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 103/218 (47%), Gaps = 22/218 (10%)
Query: 344 EVLGKGSYGTAYKAVL------EESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVV 397
+V+G G +G L E S RDF + I+G+ HPN++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF-DHPNII 109
Query: 398 PLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHS 457
L ++V +Y +GSL + L A T + V +L G A G+ ++
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQ---LVGMLRGIASGMKYLSD 165
Query: 458 MGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM-NVPATPSRSAG------YRAPEVI 510
MG + H ++ A N+LIN +L +SDFGL+ ++ + P + G + +PE I
Sbjct: 166 MG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 511 ETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMV 547
RK + SDV+S+G++L E+++ G+ P + D++
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI 260
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 103/218 (47%), Gaps = 22/218 (10%)
Query: 344 EVLGKGSYGTAYKAVL------EESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVV 397
+V+G G +G L E S RDF + I+G+ HPN++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF-DHPNII 109
Query: 398 PLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHS 457
L ++V +Y +GSL + L A T + V +L G A G+ ++
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQ---LVGMLRGIASGMKYLSD 165
Query: 458 MGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM-NVPATPSRSAG------YRAPEVI 510
MG + H ++ A N+LIN +L +SDFGL+ ++ + P + G + +PE I
Sbjct: 166 MG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 511 ETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMV 547
RK + SDV+S+G++L E+++ G+ P + D++
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI 260
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 103/218 (47%), Gaps = 22/218 (10%)
Query: 344 EVLGKGSYGTAYKAVL------EESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVV 397
+V+G G +G L E S RDF + I+G+ HPN++
Sbjct: 49 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF-DHPNII 107
Query: 398 PLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHS 457
L ++V +Y +GSL + L A T + V +L G A G+ ++
Sbjct: 108 RLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQ---LVGMLRGIASGMKYLSD 163
Query: 458 MGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM-NVPATPSRSAG------YRAPEVI 510
MG + H ++ A N+LIN +L +SDFGL+ ++ + P + G + +PE I
Sbjct: 164 MG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 220
Query: 511 ETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMV 547
RK + SDV+S+G++L E+++ G+ P + D++
Sbjct: 221 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI 258
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 102/218 (46%), Gaps = 22/218 (10%)
Query: 344 EVLGKGSYGTAYKAVL------EESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVV 397
+V+G G +G L E S RDF + I+G+ HPN++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF-DHPNII 109
Query: 398 PLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHS 457
L ++V +Y +GSL + L A T + V +L G A G+ ++
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQ---LVGMLRGIASGMKYLSD 165
Query: 458 MGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM-NVPATPSRSAG------YRAPEVI 510
MG + H ++ A N+LIN +L +SDFGL ++ + P + G + +PE I
Sbjct: 166 MG---YVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 511 ETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMV 547
RK + SDV+S+G++L E+++ G+ P + D++
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI 260
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 103/218 (47%), Gaps = 22/218 (10%)
Query: 344 EVLGKGSYGTAYKAVL------EESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVV 397
+V+G G +G L E S RDF + I+G+ HPN++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF-DHPNII 109
Query: 398 PLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHS 457
L ++V +Y +GSL + L A T + V +L G A G+ ++
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQ---LVGMLRGIASGMKYLSD 165
Query: 458 MGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM-NVPATPSRSAG------YRAPEVI 510
MG + H ++ A N+LIN +L +SDFGL+ ++ + P + G + +PE I
Sbjct: 166 MG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 511 ETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMV 547
RK + SDV+S+G++L E+++ G+ P + D++
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI 260
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 82/162 (50%), Gaps = 14/162 (8%)
Query: 393 HPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGT-ARG 451
HP VV L + ++ + L+ D+ G L T L + + E VK L A G
Sbjct: 89 HPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRL------SKEVMFTEEDVKFYLAELALG 142
Query: 452 VAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRS----AGYRAP 507
+ H+HS+G + ++K N+L++++ ++DFGL+ + S Y AP
Sbjct: 143 LDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAP 199
Query: 508 EVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDL 549
EV+ + HSH +D +S+GVL+ EMLTG P Q R + + L
Sbjct: 200 EVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTL 241
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 91/179 (50%), Gaps = 18/179 (10%)
Query: 378 RDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLD 437
RDF + I+G+ HPN++ L ++V +Y +GSL T L + G
Sbjct: 95 RDFLSEASIMGQF-DHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDG------- 146
Query: 438 WETRVKILLGTARGV-AHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM-NVP 495
+ + L+G RGV A + + + H ++ A NVL++ +L +SDFGL+ ++ + P
Sbjct: 147 -QFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDP 205
Query: 496 ATPSRSAG------YRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMV 547
+ G + APE I R S SDV+SFGV++ E+L G+ P + T D++
Sbjct: 206 DAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVI 264
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 102/218 (46%), Gaps = 22/218 (10%)
Query: 344 EVLGKGSYGTAYKAVL------EESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVV 397
+V+G G +G L E S RDF + I+G+ HPN++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF-DHPNII 109
Query: 398 PLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHS 457
L ++V +Y +GSL + L A T + V +L G A G+ ++
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQ---LVGMLRGIASGMKYLSD 165
Query: 458 MGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM-NVPATPSRSAG------YRAPEVI 510
MG + H ++ A N+LIN +L +SDFGL ++ + P + G + +PE I
Sbjct: 166 MG---YVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 511 ETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMV 547
RK + SDV+S+G++L E+++ G+ P + D++
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI 260
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 91/179 (50%), Gaps = 18/179 (10%)
Query: 378 RDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLD 437
RDF + I+G+ HPN++ L ++V +Y +GSL T L + G
Sbjct: 95 RDFLSEASIMGQF-DHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDG------- 146
Query: 438 WETRVKILLGTARGV-AHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM-NVP 495
+ + L+G RGV A + + + H ++ A NVL++ +L +SDFGL+ ++ + P
Sbjct: 147 -QFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDP 205
Query: 496 ATPSRSAG------YRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMV 547
+ G + APE I R S SDV+SFGV++ E+L G+ P + T D++
Sbjct: 206 DAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVI 264
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 117/255 (45%), Gaps = 34/255 (13%)
Query: 378 RDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLD 437
RDF + I+G+ HPN++ L +++ +Y +GSL L N G
Sbjct: 60 RDFLSEASIMGQF-DHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVI-- 116
Query: 438 WETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM-NVPA 496
V +L G G+ ++ M + H ++ A N+L+N +L +SDFG++ ++ + P
Sbjct: 117 --QLVGMLRGIGSGMKYLSDMS---YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPE 171
Query: 497 TPSRSAG------YRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDL 549
+ G + APE I RK + SDV+S+G+++ E+++ G+ P + D++
Sbjct: 172 AAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVI-- 229
Query: 550 PRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIE 609
+ E + R + + + Q+ + C K RP ++V M++
Sbjct: 230 -----KAIEEGY----------RLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLD 274
Query: 610 E-VRQSDSENRPSSE 623
+ +R +S R SE
Sbjct: 275 KLIRNPNSLKRTGSE 289
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 117/255 (45%), Gaps = 34/255 (13%)
Query: 378 RDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLD 437
RDF + I+G+ HPN++ L +++ +Y +GSL L N G
Sbjct: 54 RDFLSEASIMGQF-DHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVI-- 110
Query: 438 WETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM-NVPA 496
V +L G G+ ++ M + H ++ A N+L+N +L +SDFG++ ++ + P
Sbjct: 111 --QLVGMLRGIGSGMKYLSDMS---YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPE 165
Query: 497 TPSRSAG------YRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDL 549
+ G + APE I RK + SDV+S+G+++ E+++ G+ P + D++
Sbjct: 166 AAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVI-- 223
Query: 550 PRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIE 609
+ E + R + + + Q+ + C K RP ++V M++
Sbjct: 224 -----KAIEEGY----------RLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLD 268
Query: 610 E-VRQSDSENRPSSE 623
+ +R +S R SE
Sbjct: 269 KLIRNPNSLKRTGSE 283
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 92/178 (51%), Gaps = 16/178 (8%)
Query: 378 RDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLD 437
RDF + I+G+ HPNVV L ++V ++ +G+L L + G
Sbjct: 89 RDFLCEASIMGQF-DHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVI-- 145
Query: 438 WETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM-NVPA 496
V +L G A G+ ++ MG + H ++ A N+L+N +L +SDFGL+ ++ + P
Sbjct: 146 --QLVGMLRGIAAGMRYLADMG---YVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPE 200
Query: 497 TPSRSAG------YRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMV 547
+ G + APE I+ RK + SDV+S+G+++ E+++ G+ P + D++
Sbjct: 201 AVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVI 258
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 102/222 (45%), Gaps = 26/222 (11%)
Query: 344 EVLGKGSYGTAYKAVL------EESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVV 397
EV+G G +G + L E R+F + I+G+ +HPN++
Sbjct: 20 EVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQF-EHPNII 78
Query: 398 PLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAH-IH 456
L + +++ ++ +G+L + L N G + V L+G RG+A +
Sbjct: 79 RLEGVVTNSMPVMILTEFMENGALDSFLRLNDG--------QFTVIQLVGMLRGIASGMR 130
Query: 457 SMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV----PATPSRSAG-----YRAP 507
+ + H ++ A N+L+N +L +SDFGL+ + P S G + AP
Sbjct: 131 YLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAP 190
Query: 508 EVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVD 548
E I RK + SD +S+G+++ E+++ G+ P + D+++
Sbjct: 191 EAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVIN 232
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 137/292 (46%), Gaps = 31/292 (10%)
Query: 330 SYNFDLEDLLRASAEVLGKGSYGTAYKAVLE-ESTTXXXXXXXXXXXXXRDFEQQMEIVG 388
S ++++ D + +G GS+GT YK + + F+ ++ ++
Sbjct: 4 SDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL- 62
Query: 389 RVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGT 448
R +H N++ L Y +K + +V + SL LH A T + + + I T
Sbjct: 63 RKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLH----ASETKFEMKKLIDIARQT 117
Query: 449 ARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATP------SRSA 502
ARG+ ++H+ H ++K++N+ +++D I DFGL + + + S S
Sbjct: 118 ARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSI 174
Query: 503 GYRAPEVI---ETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVRE 559
+ APEVI ++ +S +SDVY+FG++L E++TG+ P + D + ++ V R
Sbjct: 175 LWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI-----IEMVGRG 229
Query: 560 EWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEV 611
+ ++ V N + M +++ C+ K D RP+ ++ IEE+
Sbjct: 230 SLSPDLSKVR----SNCPKRMKRLM---AECLKKKRDERPSFPRILAEIEEL 274
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 102/222 (45%), Gaps = 26/222 (11%)
Query: 344 EVLGKGSYGTAYKAVL------EESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVV 397
EV+G G +G + L E R+F + I+G+ +HPN++
Sbjct: 22 EVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQF-EHPNII 80
Query: 398 PLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAH-IH 456
L + +++ ++ +G+L + L N G + V L+G RG+A +
Sbjct: 81 RLEGVVTNSMPVMILTEFMENGALDSFLRLNDG--------QFTVIQLVGMLRGIASGMR 132
Query: 457 SMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV----PATPSRSAG-----YRAP 507
+ + H ++ A N+L+N +L +SDFGL+ + P S G + AP
Sbjct: 133 YLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAP 192
Query: 508 EVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVD 548
E I RK + SD +S+G+++ E+++ G+ P + D+++
Sbjct: 193 EAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVIN 234
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 22/218 (10%)
Query: 344 EVLGKGSYGTAYKAVL------EESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVV 397
+V+G G +G L E S RDF + I+G+ HPN++
Sbjct: 22 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF-DHPNII 80
Query: 398 PLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHS 457
L ++V + +GSL + L A T + V +L G A G+ ++
Sbjct: 81 RLEGVVTKSKPVMIVTEXMENGSLDSFLR-KHDAQFTVIQ---LVGMLRGIASGMKYLSD 136
Query: 458 MGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM-NVPATPSRSAG------YRAPEVI 510
MG + H ++ A N+LIN +L +SDFGL+ ++ + P + G + +PE I
Sbjct: 137 MG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 193
Query: 511 ETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMV 547
RK + SDV+S+G++L E+++ G+ P + D++
Sbjct: 194 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI 231
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 107/233 (45%), Gaps = 34/233 (14%)
Query: 392 QHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTP---LDWETRVKILLGT 448
HPN+V + KDE LV + GS+ ++ G LD T IL
Sbjct: 71 HHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREV 130
Query: 449 ARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR-------- 500
G+ ++H G H ++KA N+L+ +D I+DFG++ + +R
Sbjct: 131 LEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFV 187
Query: 501 -SAGYRAPEVIE-TRKHSHKSDVYSFGVLLLEMLTGKAPLQS--PTRDDMVDL---PRWV 553
+ + APEV+E R + K+D++SFG+ +E+ TG AP P + M+ L P +
Sbjct: 188 GTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSL 247
Query: 554 QSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVR 606
++ V+++ L ++ +M+ + C+ K P+ RP E++R
Sbjct: 248 ETGVQDKEM-------LKKYGKSFRKMISL------CLQKDPEKRPTAAELLR 287
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 116/255 (45%), Gaps = 34/255 (13%)
Query: 378 RDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLD 437
RDF + I+G+ HPN++ L +++ +Y +GSL L N G
Sbjct: 75 RDFLSEASIMGQF-DHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVI-- 131
Query: 438 WETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM-NVPA 496
V +L G G+ ++ M H ++ A N+L+N +L +SDFG++ ++ + P
Sbjct: 132 --QLVGMLRGIGSGMKYLSDMSA---VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPE 186
Query: 497 TPSRSAG------YRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDL 549
+ G + APE I RK + SDV+S+G+++ E+++ G+ P + D++
Sbjct: 187 AAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVI-- 244
Query: 550 PRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIE 609
+ E + R + + + Q+ + C K RP ++V M++
Sbjct: 245 -----KAIEEGY----------RLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLD 289
Query: 610 E-VRQSDSENRPSSE 623
+ +R +S R SE
Sbjct: 290 KLIRNPNSLKRTGSE 304
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 107/233 (45%), Gaps = 34/233 (14%)
Query: 392 QHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTP---LDWETRVKILLGT 448
HPN+V + KDE LV + GS+ ++ G LD T IL
Sbjct: 66 HHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREV 125
Query: 449 ARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR-------- 500
G+ ++H G H ++KA N+L+ +D I+DFG++ + +R
Sbjct: 126 LEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFV 182
Query: 501 -SAGYRAPEVIE-TRKHSHKSDVYSFGVLLLEMLTGKAPLQS--PTRDDMVDL---PRWV 553
+ + APEV+E R + K+D++SFG+ +E+ TG AP P + M+ L P +
Sbjct: 183 GTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSL 242
Query: 554 QSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVR 606
++ V+++ L ++ +M+ + C+ K P+ RP E++R
Sbjct: 243 ETGVQDKEM-------LKKYGKSFRKMISL------CLQKDPEKRPTAAELLR 282
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 136/298 (45%), Gaps = 43/298 (14%)
Query: 330 SYNFDLEDLLRASAEVLGKGSYGTAYKAVLE-ESTTXXXXXXXXXXXXXRDFEQQMEIVG 388
S ++++ D + +G GS+GT YK + + F+ ++ ++
Sbjct: 16 SDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL- 74
Query: 389 RVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGT 448
R +H N++ L Y +K + +V + SL LH A T + + + I T
Sbjct: 75 RKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLH----ASETKFEMKKLIDIARQT 129
Query: 449 ARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG----- 503
ARG+ ++H+ H ++K++N+ +++D I DFGL SR +G
Sbjct: 130 ARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLA------TEKSRWSGSHQFE 180
Query: 504 -------YRAPEVI---ETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWV 553
+ APEVI ++ +S +SDVY+FG++L E++TG+ P + D + +
Sbjct: 181 QLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI-----I 235
Query: 554 QSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEV 611
+ V R + ++ V N + M +++ C+ K D RP+ ++ IEE+
Sbjct: 236 EMVGRGSLSPDLSKVR----SNCPKRMKRLM---AECLKKKRDERPSFPRILAEIEEL 286
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 22/218 (10%)
Query: 344 EVLGKGSYGTAYKAVL------EESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVV 397
+V+G G +G L E S RDF + I+G+ HPN++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF-DHPNII 109
Query: 398 PLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHS 457
L ++V + +GSL + L A T + V +L G A G+ ++
Sbjct: 110 RLEGVVTKSKPVMIVTEXMENGSLDSFLR-KHDAQFTVIQ---LVGMLRGIASGMKYLSD 165
Query: 458 MGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM-NVPATPSRSAG------YRAPEVI 510
MG + H ++ A N+LIN +L +SDFGL+ ++ + P + G + +PE I
Sbjct: 166 MG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 511 ETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMV 547
RK + SDV+S+G++L E+++ G+ P + D++
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI 260
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 97/220 (44%), Gaps = 22/220 (10%)
Query: 331 YNFDLEDLLRASAEVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRV 390
Y+ DL+D + LG+GS+ K V ++S + ++++ +
Sbjct: 10 YDLDLKD------KPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEA-NTQKEITALKLC 62
Query: 391 GQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTAR 450
HPN+V L ++ + LV + G L + + T + I+
Sbjct: 63 EGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASY-----IMRKLVS 117
Query: 451 GVAHIHSMGGPKFTHGNIKASNVLI---NQDLDGCISDFG---LTPLMNVP-ATPSRSAG 503
V+H+H +G H ++K N+L N +L+ I DFG L P N P TP +
Sbjct: 118 AVSHMHDVG---VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLH 174
Query: 504 YRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTR 543
Y APE++ + D++S GV+L ML+G+ P QS R
Sbjct: 175 YAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDR 214
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 120/271 (44%), Gaps = 30/271 (11%)
Query: 346 LGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAYYYS 405
LG G +G + ST + F ++ ++ + QH +V L A
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLM-KTLQHDKLVRLYAVVTR 79
Query: 406 KDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTH 465
++ ++ +Y A GSL L + G G+ L + A G+A+I + H
Sbjct: 80 EEPIYIITEYMAKGSLLDFLKSDEG-GKVLL--PKLIDFSAQIAEGMAYIER---KNYIH 133
Query: 466 GNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG-----YRAPEVIETRKHSHKSD 520
+++A+NVL+++ L I+DFGL ++ +R + APE I + KSD
Sbjct: 134 RDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSD 193
Query: 521 VYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEE 579
V+SFG+LL E++T GK P T D++ TA + R +N +E
Sbjct: 194 VWSFGILLYEIVTYGKIPYPGRTNADVM--------------TALSQGYRMPRVENCPDE 239
Query: 580 MVQMLQIGMACVAKVPDMRPNMDEVVRMIEE 610
+ ++++ C + + RP D + ++++
Sbjct: 240 LYDIMKM---CWKEKAEERPTFDYLQSVLDD 267
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 137/310 (44%), Gaps = 37/310 (11%)
Query: 318 PEKNKLVFFEGCSYNFDLEDLLRASAEV---LGKGSYGTAYKAVLEE-STTXXXXXXXXX 373
P++NK + G S N+D ++ R + LG G YG Y+ V ++ S T
Sbjct: 198 PKRNKPTIY-GVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED 256
Query: 374 XXXXRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGR 433
+F ++ ++ + +HPN+V L + ++ ++ G+L L R R
Sbjct: 257 TMEVEEFLKEAAVMKEI-KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNR 312
Query: 434 TPLDWETRVKILLGTARGVAH-IHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM 492
E +LL A ++ + + F H N+ A N L+ ++ ++DFGL+ LM
Sbjct: 313 Q----EVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLM 368
Query: 493 NVPATPSRSAG-----YRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDM 546
+ + + APE + K S KSDV++FGVLL E+ T G +P
Sbjct: 369 TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG------ 422
Query: 547 VDLPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVR 606
+DL + + + + D + R + E++ ++++ AC P RP+ E+ +
Sbjct: 423 IDLSQVYELLEK--------DYRMERPEGCPEKVYELMR---ACWQWNPSDRPSFAEIHQ 471
Query: 607 MIEEVRQSDS 616
E + Q S
Sbjct: 472 AFETMFQESS 481
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 137/310 (44%), Gaps = 37/310 (11%)
Query: 318 PEKNKLVFFEGCSYNFDLEDLLRASAEV---LGKGSYGTAYKAVLEE-STTXXXXXXXXX 373
P++NK + G S N+D ++ R + LG G YG Y+ V ++ S T
Sbjct: 237 PKRNKPTVY-GVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED 295
Query: 374 XXXXRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGR 433
+F ++ ++ + +HPN+V L + ++ ++ G+L L R R
Sbjct: 296 TMEVEEFLKEAAVMKEI-KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNR 351
Query: 434 TPLDWETRVKILLGTARGVAH-IHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM 492
E +LL A ++ + + F H N+ A N L+ ++ ++DFGL+ LM
Sbjct: 352 Q----EVNAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLM 407
Query: 493 NVPATPSRSAG-----YRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDM 546
+ + + APE + K S KSDV++FGVLL E+ T G +P
Sbjct: 408 TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG------ 461
Query: 547 VDLPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVR 606
+DL + + + + D + R + E++ ++++ AC P RP+ E+ +
Sbjct: 462 IDLSQVYELLEK--------DYRMERPEGCPEKVYELMR---ACWQWNPSDRPSFAEIHQ 510
Query: 607 MIEEVRQSDS 616
E + Q S
Sbjct: 511 AFETMFQESS 520
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 98/217 (45%), Gaps = 27/217 (12%)
Query: 344 EVLGKGSYGTAYKA-------VLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNV 396
E +G+G+YG YKA V + R+ E+ HPN+
Sbjct: 27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKEL-----HHPNI 81
Query: 397 VPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILL-GTARGVAHI 455
V L +S+ LV++ F L +L N+ + ++++KI L RGVAH
Sbjct: 82 VSLIDVIHSERCLTLVFE-FMEKDLKKVLDENKTGLQ-----DSQIKIYLYQLLRGVAHC 135
Query: 456 HSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR----SAGYRAPEVIE 511
H + H ++K N+LIN D ++DFGL +P + YRAP+V+
Sbjct: 136 HQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLM 192
Query: 512 -TRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMV 547
++K+S D++S G + EM+TGK T DD +
Sbjct: 193 GSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQL 229
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 98/217 (45%), Gaps = 27/217 (12%)
Query: 344 EVLGKGSYGTAYKA-------VLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNV 396
E +G+G+YG YKA V + R+ E+ HPN+
Sbjct: 27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKEL-----HHPNI 81
Query: 397 VPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILL-GTARGVAHI 455
V L +S+ LV++ F L +L N+ + ++++KI L RGVAH
Sbjct: 82 VSLIDVIHSERCLTLVFE-FMEKDLKKVLDENKTGLQ-----DSQIKIYLYQLLRGVAHC 135
Query: 456 HSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR----SAGYRAPEVIE 511
H + H ++K N+LIN D ++DFGL +P + YRAP+V+
Sbjct: 136 HQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLM 192
Query: 512 -TRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMV 547
++K+S D++S G + EM+TGK T DD +
Sbjct: 193 GSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQL 229
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 22/218 (10%)
Query: 344 EVLGKGSYGTAYKAVL------EESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVV 397
+V+G G +G L E S RDF + I+G+ HPN++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF-DHPNII 109
Query: 398 PLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHS 457
L ++V + +GSL + L A T + V +L G A G+ ++
Sbjct: 110 RLEGVVTKSKPVMIVTEXMENGSLDSFLR-KHDAQFTVIQ---LVGMLRGIASGMKYLSD 165
Query: 458 MGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM-NVPATPSRSAG------YRAPEVI 510
MG H ++ A N+LIN +L +SDFGL+ ++ + P + G + +PE I
Sbjct: 166 MGA---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 511 ETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMV 547
RK + SDV+S+G++L E+++ G+ P + D++
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI 260
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 80/162 (49%), Gaps = 14/162 (8%)
Query: 393 HPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGT-ARG 451
HP +V L + ++ + L+ D+ G L T L + + E VK L A
Sbjct: 86 HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL------SKEVMFTEEDVKFYLAELALA 139
Query: 452 VAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRS----AGYRAP 507
+ H+HS+G + ++K N+L++++ ++DFGL+ + S Y AP
Sbjct: 140 LDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAP 196
Query: 508 EVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDL 549
EV+ R H+ +D +SFGVL+ EMLTG P Q R + + +
Sbjct: 197 EVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTM 238
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 80/162 (49%), Gaps = 14/162 (8%)
Query: 393 HPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGT-ARG 451
HP +V L + ++ + L+ D+ G L T L + + E VK L A
Sbjct: 85 HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL------SKEVMFTEEDVKFYLAELALA 138
Query: 452 VAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRS----AGYRAP 507
+ H+HS+G + ++K N+L++++ ++DFGL+ + S Y AP
Sbjct: 139 LDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAP 195
Query: 508 EVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDL 549
EV+ R H+ +D +SFGVL+ EMLTG P Q R + + +
Sbjct: 196 EVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTM 237
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 137/310 (44%), Gaps = 37/310 (11%)
Query: 318 PEKNKLVFFEGCSYNFDLEDLLRASAEV---LGKGSYGTAYKAVLEE-STTXXXXXXXXX 373
P++NK + G S N+D ++ R + LG G YG Y+ V ++ S T
Sbjct: 195 PKRNKPTVY-GVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED 253
Query: 374 XXXXRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGR 433
+F ++ ++ + +HPN+V L + ++ ++ G+L L R R
Sbjct: 254 TMEVEEFLKEAAVMKEI-KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNR 309
Query: 434 TPLDWETRVKILLGTARGVAH-IHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM 492
E +LL A ++ + + F H N+ A N L+ ++ ++DFGL+ LM
Sbjct: 310 Q----EVNAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLM 365
Query: 493 NVPATPSRSAG-----YRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDM 546
+ + + APE + K S KSDV++FGVLL E+ T G +P
Sbjct: 366 TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG------ 419
Query: 547 VDLPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVR 606
+DL + + + + D + R + E++ ++++ AC P RP+ E+ +
Sbjct: 420 IDLSQVYELLEK--------DYRMERPEGCPEKVYELMR---ACWQWNPSDRPSFAEIHQ 468
Query: 607 MIEEVRQSDS 616
E + Q S
Sbjct: 469 AFETMFQESS 478
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 80/162 (49%), Gaps = 14/162 (8%)
Query: 393 HPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGT-ARG 451
HP +V L + ++ + L+ D+ G L T L + + E VK L A
Sbjct: 85 HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL------SKEVMFTEEDVKFYLAELALA 138
Query: 452 VAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRS----AGYRAP 507
+ H+HS+G + ++K N+L++++ ++DFGL+ + S Y AP
Sbjct: 139 LDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAP 195
Query: 508 EVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDL 549
EV+ R H+ +D +SFGVL+ EMLTG P Q R + + +
Sbjct: 196 EVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTM 237
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 139/311 (44%), Gaps = 31/311 (9%)
Query: 314 GVQEPEKNKLVFFEGCSYNFDLEDLLRASAEVLGKGSYGTAYKAVLE-ESTTXXXXXXXX 372
G QE K + SY +++E + +G GS+GT YK +
Sbjct: 12 GTQEKNKIRPRGQRDSSYYWEIEASEVMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVDP 71
Query: 373 XXXXXRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAG 432
+ F ++ ++ R +H N++ Y +KD +V + SL LH
Sbjct: 72 TPEQFQAFRNEVAVL-RKTRHVNILLFMGYM-TKDNLAIVTQWCEGSSLYKHLH----VQ 125
Query: 433 RTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM 492
T + I TA+G+ ++H+ H ++K++N+ +++ L I DFGL +
Sbjct: 126 ETKFQMFQLIDIARQTAQGMDYLHA---KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVK 182
Query: 493 NVPA------TPSRSAGYRAPEVIETRKH---SHKSDVYSFGVLLLEMLTGKAPLQSPTR 543
+ + P+ S + APEVI + + S +SDVYS+G++L E++TG+ P
Sbjct: 183 SRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINN 242
Query: 544 DDMVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDE 603
D + + V R + ++ + ++N + M +++ CV KV + RP +
Sbjct: 243 RDQI-----IFMVGRGYASPDLSKL----YKNCPKAMKRLV---ADCVKKVKEERPLFPQ 290
Query: 604 VVRMIEEVRQS 614
++ IE ++ S
Sbjct: 291 ILSSIELLQHS 301
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 99/210 (47%), Gaps = 16/210 (7%)
Query: 346 LGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAYYYS 405
LG+G +G + +T F Q+ +++ ++ +H +V L A S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKI-RHEKLVQLYAVV-S 83
Query: 406 KDEKLLVYDYFASGSLSTLLHGNRGAG-RTPLDWETRVKILLGTARGVAHIHSMGGPKFT 464
++ +V +Y + GSL L G G R P V + A G+A++ M +
Sbjct: 84 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP----QLVDMAAQIASGMAYVERM---NYV 136
Query: 465 HGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG-----YRAPEVIETRKHSHKS 519
H +++A+N+L+ ++L ++DFGL L+ +R + APE + + KS
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 520 DVYSFGVLLLEMLT-GKAPLQSPTRDDMVD 548
DV+SFG+LL E+ T G+ P +++D
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVLD 226
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 99/210 (47%), Gaps = 16/210 (7%)
Query: 346 LGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAYYYS 405
LG+G +G + +T F Q+ +++ ++ +H +V L A S
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAVV-S 73
Query: 406 KDEKLLVYDYFASGSLSTLLHGNRGAG-RTPLDWETRVKILLGTARGVAHIHSMGGPKFT 464
++ +V +Y + GSL L G G R P V + A G+A++ M +
Sbjct: 74 EEPIXIVTEYMSKGSLLDFLKGETGKYLRLP----QLVDMAAQIASGMAYVERMN---YV 126
Query: 465 HGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG-----YRAPEVIETRKHSHKS 519
H +++A+N+L+ ++L ++DFGL L+ +R + APE + + KS
Sbjct: 127 HRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKS 186
Query: 520 DVYSFGVLLLEMLT-GKAPLQSPTRDDMVD 548
DV+SFG+LL E+ T G+ P +++D
Sbjct: 187 DVWSFGILLTELTTKGRVPYPGMVNREVLD 216
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 99/210 (47%), Gaps = 16/210 (7%)
Query: 346 LGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAYYYS 405
LG+G +G + +T F Q+ +++ ++ +H +V L A S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAVV-S 83
Query: 406 KDEKLLVYDYFASGSLSTLLHGNRGAG-RTPLDWETRVKILLGTARGVAHIHSMGGPKFT 464
++ +V +Y + GSL L G G R P V + A G+A++ M +
Sbjct: 84 EEPIYIVIEYMSKGSLLDFLKGEMGKYLRLP----QLVDMAAQIASGMAYVERM---NYV 136
Query: 465 HGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG-----YRAPEVIETRKHSHKS 519
H +++A+N+L+ ++L ++DFGL L+ +R + APE + + KS
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 520 DVYSFGVLLLEMLT-GKAPLQSPTRDDMVD 548
DV+SFG+LL E+ T G+ P +++D
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVLD 226
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 122/275 (44%), Gaps = 33/275 (12%)
Query: 343 AEVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAY 402
E LG G +G + T F + ++ ++ QH +V L A
Sbjct: 14 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL-QHQRLVRLYAV 72
Query: 403 YYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAH-IHSMGGP 461
+++ ++ +Y +GSL L +TP + + LL A +A + +
Sbjct: 73 V-TQEPIYIITEYMENGSLVDFL-------KTPSGIKLTINKLLDMAAQIAEGMAFIEER 124
Query: 462 KFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG-----YRAPEVIETRKHS 516
+ H N++A+N+L++ L I+DFGL L+ +R + APE I +
Sbjct: 125 NYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFT 184
Query: 517 HKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQN 575
KSDV+SFG+LL E++T G+ P T P +Q++ R ++R N
Sbjct: 185 IKSDVWSFGILLTEIVTHGRIPYPGMTN------PEVIQNLER--------GYRMVRPDN 230
Query: 576 IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEE 610
EE+ Q++++ C + P+ RP D + ++E+
Sbjct: 231 CPEELYQLMRL---CWKERPEDRPTFDYLRSVLED 262
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 99/210 (47%), Gaps = 16/210 (7%)
Query: 346 LGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAYYYS 405
LG+G +G + +T F Q+ +++ ++ +H +V L A S
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAVV-S 72
Query: 406 KDEKLLVYDYFASGSLSTLLHGNRGAG-RTPLDWETRVKILLGTARGVAHIHSMGGPKFT 464
++ +V +Y + GSL L G G R P V + A G+A++ M +
Sbjct: 73 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP----QLVDMAAQIASGMAYVERMN---YV 125
Query: 465 HGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG-----YRAPEVIETRKHSHKS 519
H +++A+N+L+ ++L ++DFGL L+ +R + APE + + KS
Sbjct: 126 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 185
Query: 520 DVYSFGVLLLEMLT-GKAPLQSPTRDDMVD 548
DV+SFG+LL E+ T G+ P +++D
Sbjct: 186 DVWSFGILLTELTTKGRVPYPGMVNREVLD 215
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 99/210 (47%), Gaps = 16/210 (7%)
Query: 346 LGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAYYYS 405
LG+G +G + +T F Q+ +++ ++ +H +V L A S
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAVV-S 74
Query: 406 KDEKLLVYDYFASGSLSTLLHGNRGAG-RTPLDWETRVKILLGTARGVAHIHSMGGPKFT 464
++ +V +Y + GSL L G G R P V + A G+A++ M +
Sbjct: 75 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP----QLVDMAAQIASGMAYVERMN---YV 127
Query: 465 HGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG-----YRAPEVIETRKHSHKS 519
H +++A+N+L+ ++L ++DFGL L+ +R + APE + + KS
Sbjct: 128 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 187
Query: 520 DVYSFGVLLLEMLT-GKAPLQSPTRDDMVD 548
DV+SFG+LL E+ T G+ P +++D
Sbjct: 188 DVWSFGILLTELTTKGRVPYPGMVNREVLD 217
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 99/210 (47%), Gaps = 16/210 (7%)
Query: 346 LGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAYYYS 405
LG+G +G + +T F Q+ +++ ++ +H +V L A S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAVV-S 83
Query: 406 KDEKLLVYDYFASGSLSTLLHGNRGAG-RTPLDWETRVKILLGTARGVAHIHSMGGPKFT 464
++ +V +Y + GSL L G G R P V + A G+A++ M +
Sbjct: 84 EEPIYIVIEYMSKGSLLDFLKGEMGKYLRLP----QLVDMAAQIASGMAYVERM---NYV 136
Query: 465 HGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG-----YRAPEVIETRKHSHKS 519
H +++A+N+L+ ++L ++DFGL L+ +R + APE + + KS
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 520 DVYSFGVLLLEMLT-GKAPLQSPTRDDMVD 548
DV+SFG+LL E+ T G+ P +++D
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVLD 226
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 99/210 (47%), Gaps = 16/210 (7%)
Query: 346 LGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAYYYS 405
LG+G +G + +T F Q+ +++ ++ +H +V L A S
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAVV-S 76
Query: 406 KDEKLLVYDYFASGSLSTLLHGNRGAG-RTPLDWETRVKILLGTARGVAHIHSMGGPKFT 464
++ +V +Y + GSL L G G R P V + A G+A++ M +
Sbjct: 77 EEPIYIVTEYMSKGSLLDFLKGETGKYLRLP----QLVDMAAQIASGMAYVERMN---YV 129
Query: 465 HGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG-----YRAPEVIETRKHSHKS 519
H +++A+N+L+ ++L ++DFGL L+ +R + APE + + KS
Sbjct: 130 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 189
Query: 520 DVYSFGVLLLEMLT-GKAPLQSPTRDDMVD 548
DV+SFG+LL E+ T G+ P +++D
Sbjct: 190 DVWSFGILLTELTTKGRVPYPGMVNREVLD 219
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 99/210 (47%), Gaps = 16/210 (7%)
Query: 346 LGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAYYYS 405
LG+G +G + +T F Q+ +++ ++ +H +V L A S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAVV-S 83
Query: 406 KDEKLLVYDYFASGSLSTLLHGNRGAG-RTPLDWETRVKILLGTARGVAHIHSMGGPKFT 464
++ +V +Y + GSL L G G R P V + A G+A++ M +
Sbjct: 84 EEPIYIVCEYMSKGSLLDFLKGEMGKYLRLP----QLVDMAAQIASGMAYVERM---NYV 136
Query: 465 HGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG-----YRAPEVIETRKHSHKS 519
H +++A+N+L+ ++L ++DFGL L+ +R + APE + + KS
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 520 DVYSFGVLLLEMLT-GKAPLQSPTRDDMVD 548
DV+SFG+LL E+ T G+ P +++D
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVLD 226
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 99/210 (47%), Gaps = 16/210 (7%)
Query: 346 LGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAYYYS 405
LG+G +G + +T F Q+ +++ ++ +H +V L A S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAVV-S 83
Query: 406 KDEKLLVYDYFASGSLSTLLHGNRGAG-RTPLDWETRVKILLGTARGVAHIHSMGGPKFT 464
++ +V +Y + GSL L G G R P V + A G+A++ M +
Sbjct: 84 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP----QLVDMAAQIASGMAYVERM---NYV 136
Query: 465 HGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG-----YRAPEVIETRKHSHKS 519
H +++A+N+L+ ++L ++DFGL L+ +R + APE + + KS
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 520 DVYSFGVLLLEMLT-GKAPLQSPTRDDMVD 548
DV+SFG+LL E+ T G+ P +++D
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVLD 226
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 90/197 (45%), Gaps = 12/197 (6%)
Query: 30 DRQALLDFADAVPHLRKLN-WSSTNPIC-QSWVGINCTQDRT--RVFGLRLPGIGLVGPI 85
D+QALL + + L+ W T C ++W+G+ C D RV L L G+ L P
Sbjct: 7 DKQALLQIKKDLGNPTTLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPY 66
Query: 86 P-NNTLGKLDALEVLSLRS-NVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQ 141
P ++L L L L + N L G +P I L L YLY+ H N SG IP S
Sbjct: 67 PIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKT 126
Query: 142 LVVLDLSFNSFTGNIPQSIQNLTXXXXXXXXXXXXXXXIPNF--DIPKL-RHLNLSYNGL 198
LV LD S+N+ +G +P SI +L IP+ KL + +S N L
Sbjct: 127 LVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRL 186
Query: 199 KGSIPSSLQKFPNSSFV 215
G IP + N +FV
Sbjct: 187 TGKIPPTFANL-NLAFV 202
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 22/40 (55%)
Query: 96 LEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIP 135
L L LR+N + G LP +T L L L + NN G+IP
Sbjct: 246 LNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP 285
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 97/236 (41%), Gaps = 33/236 (13%)
Query: 313 SGVQEPEKNKLVFFEGCSYNFDLEDLLRASAEVLGKGSYGTAYKAVLEESTTXXXXXXXX 372
S VQ+ +N + F +G D+ G GSY + + T
Sbjct: 8 SIVQQLHRNSIQFTDGYEVKEDI-----------GVGSYSVCKRCI--HKATNMEFAVKI 54
Query: 373 XXXXXRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSL-STLLHGNRGA 431
RD +++EI+ R GQHPN++ L+ Y +V + G L +L +
Sbjct: 55 IDKSKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFS 114
Query: 432 GRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGC-----ISDF 486
R +L + V ++H+ G H ++K SN+L D G I DF
Sbjct: 115 EREA------SAVLFTITKTVEYLHAQG---VVHRDLKPSNILY-VDESGNPESIRICDF 164
Query: 487 GLTPLMNVP----ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPL 538
G + TP +A + APEV+E + + D++S GVLL MLTG P
Sbjct: 165 GFAKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPF 220
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 121/274 (44%), Gaps = 43/274 (15%)
Query: 348 KGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAYYYSKD 407
KG Y A K + E S + +F Q+ + + ++ HP +V +
Sbjct: 30 KGQYDVAVKMIKEGSMSED------------EFFQEAQTMMKLS-HPKLVKFYGVCSKEY 76
Query: 408 EKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGN 467
+V +Y ++G L L + G G P +++ G+A + S +F H +
Sbjct: 77 PIYIVTEYISNGCLLNYLRSH-GKGLEP---SQLLEMCYDVCEGMAFLES---HQFIHRD 129
Query: 468 IKASNVLINQDLDGCISDFGLTPLM----NVPATPSR-SAGYRAPEVIETRKHSHKSDVY 522
+ A N L+++DL +SDFG+T + V + ++ + APEV K+S KSDV+
Sbjct: 130 LAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVW 189
Query: 523 SFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEEMV 581
+FG+L+ E+ + GK P T ++V + R ++
Sbjct: 190 AFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRPHLASDT---------------- 233
Query: 582 QMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 615
+ QI +C ++P+ RP +++ IE +R+ D
Sbjct: 234 -IYQIMYSCWHELPEKRPTFQQLLSSIEPLREKD 266
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 128/282 (45%), Gaps = 43/282 (15%)
Query: 346 LGKGSYGTAYKAVLE-ESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAYYY 404
+G GS+GT YK + + F+ ++ ++ R +H N++ L Y
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL-RKTRHVNIL-LFMGYS 89
Query: 405 SKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFT 464
+ + +V + SL LH A T + + + I TARG+ ++H+
Sbjct: 90 TAPQLAIVTQWCEGSSLYHHLH----ASETKFEMKKLIDIARQTARGMDYLHA---KSII 142
Query: 465 HGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG------------YRAPEVI-- 510
H ++K++N+ +++D I DFGL SR +G + APEVI
Sbjct: 143 HRDLKSNNIFLHEDNTVKIGDFGLA------TEKSRWSGSHQFEQLSGSILWMAPEVIRM 196
Query: 511 -ETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVE 569
++ +S +SDVY+FG++L E++TG+ P + D + ++ V R + ++ V
Sbjct: 197 QDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI-----IEMVGRGSLSPDLSKVR 251
Query: 570 LMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEV 611
N + M +++ C+ K D RP+ ++ IEE+
Sbjct: 252 ----SNCPKRMKRLM---AECLKKKRDERPSFPRILAEIEEL 286
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 98/215 (45%), Gaps = 25/215 (11%)
Query: 346 LGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRV------GQHPNVVPL 399
+G+GS+G KA+L +ST R ++ E R +HPN+V
Sbjct: 32 IGEGSFG---KAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQY 88
Query: 400 RAYYYSKDEKLLVYDYFASGSLSTLLHGNRGA---GRTPLDWETRVKILLGTARGVAHIH 456
R + +V DY G L ++ +G LDW ++ + L H+H
Sbjct: 89 RESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLAL------KHVH 142
Query: 457 SMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSA----GYRAPEVIET 512
K H +IK+ N+ + +D + DFG+ ++N +R+ Y +PE+ E
Sbjct: 143 DR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICEN 199
Query: 513 RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMV 547
+ +++KSD+++ G +L E+ T K ++ + ++V
Sbjct: 200 KPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLV 234
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 113/276 (40%), Gaps = 33/276 (11%)
Query: 346 LGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAYYYS 405
+G G +G + DF ++ E++ ++ HP +V L
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLS-HPKLVQLYGVCLE 76
Query: 406 KDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTH 465
+ LV+++ G LS L RG ET + + L G+A++ H
Sbjct: 77 QAPICLVFEFMEHGCLSDYLRTQRGLFAA----ETLLGMCLDVCEGMAYLEE---ACVIH 129
Query: 466 GNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG-----YRAPEVIETRKHSHKSD 520
++ A N L+ ++ +SDFG+T + S + + +PEV ++S KSD
Sbjct: 130 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 189
Query: 521 VYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVEL-MRFQNIEE 578
V+SFGVL+ E+ + GK P ++ + ++V+ D+ R
Sbjct: 190 VWSFGVLMWEVFSEGKIPYENRSNSEVVE------------------DISTGFRLYKPRL 231
Query: 579 EMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQS 614
+ QI C + P+ RP ++R + E+ +S
Sbjct: 232 ASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 113/276 (40%), Gaps = 33/276 (11%)
Query: 346 LGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAYYYS 405
+G G +G + DF ++ E++ ++ HP +V L
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLS-HPKLVQLYGVCLE 73
Query: 406 KDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTH 465
+ LV+++ G LS L RG ET + + L G+A++ H
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQRGLFAA----ETLLGMCLDVCEGMAYLEE---ACVIH 126
Query: 466 GNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG-----YRAPEVIETRKHSHKSD 520
++ A N L+ ++ +SDFG+T + S + + +PEV ++S KSD
Sbjct: 127 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 186
Query: 521 VYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVEL-MRFQNIEE 578
V+SFGVL+ E+ + GK P ++ + ++V+ D+ R
Sbjct: 187 VWSFGVLMWEVFSEGKIPYENRSNSEVVE------------------DISTGFRLYKPRL 228
Query: 579 EMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQS 614
+ QI C + P+ RP ++R + E+ +S
Sbjct: 229 ASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAES 264
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 88/210 (41%), Gaps = 20/210 (9%)
Query: 344 EVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAYY 403
E +G GSY + V T RD +++EI+ R GQHPN++ L+ Y
Sbjct: 33 ETIGVGSYSECKRCV--HKATNMEYAVKVIDKSKRDPSEEIEILLRYGQHPNIITLKDVY 90
Query: 404 YSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGT-ARGVAHIHSMGGPK 462
LV + G L + R E +L T + V ++HS G
Sbjct: 91 DDGKHVYLVTELMRGGELLDKIL------RQKFFSEREASFVLHTIGKTVEYLHSQG--- 141
Query: 463 FTHGNIKASNVLINQDLDG--C--ISDFGLTPLMNVP----ATPSRSAGYRAPEVIETRK 514
H ++K SN+L + C I DFG + TP +A + APEV++ +
Sbjct: 142 VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQG 201
Query: 515 HSHKSDVYSFGVLLLEMLTGKAPLQSPTRD 544
+ D++S G+LL ML G P + D
Sbjct: 202 YDEGCDIWSLGILLYTMLAGYTPFANGPSD 231
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 99/210 (47%), Gaps = 16/210 (7%)
Query: 346 LGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAYYYS 405
LG+G +G + +T F Q+ +++ ++ +H +V L A S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAVV-S 249
Query: 406 KDEKLLVYDYFASGSLSTLLHGNRGAG-RTPLDWETRVKILLGTARGVAHIHSMGGPKFT 464
++ +V +Y + GSL L G G R P V + A G+A++ M +
Sbjct: 250 EEPIYIVTEYMSKGSLLDFLKGETGKYLRLP----QLVDMAAQIASGMAYVERMN---YV 302
Query: 465 HGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG-----YRAPEVIETRKHSHKS 519
H +++A+N+L+ ++L ++DFGL L+ +R + APE + + KS
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 362
Query: 520 DVYSFGVLLLEMLT-GKAPLQSPTRDDMVD 548
DV+SFG+LL E+ T G+ P +++D
Sbjct: 363 DVWSFGILLTELTTKGRVPYPGMVNREVLD 392
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 113/276 (40%), Gaps = 33/276 (11%)
Query: 346 LGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAYYYS 405
+G G +G + DF ++ E++ ++ HP +V L
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLS-HPKLVQLYGVCLE 71
Query: 406 KDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTH 465
+ LV+++ G LS L RG ET + + L G+A++ H
Sbjct: 72 QAPICLVFEFMEHGCLSDYLRTQRGLFAA----ETLLGMCLDVCEGMAYLEE---ACVIH 124
Query: 466 GNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRS-----AGYRAPEVIETRKHSHKSD 520
++ A N L+ ++ +SDFG+T + S + + +PEV ++S KSD
Sbjct: 125 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 184
Query: 521 VYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVEL-MRFQNIEE 578
V+SFGVL+ E+ + GK P ++ + ++V+ D+ R
Sbjct: 185 VWSFGVLMWEVFSEGKIPYENRSNSEVVE------------------DISTGFRLYKPRL 226
Query: 579 EMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQS 614
+ QI C + P+ RP ++R + E+ +S
Sbjct: 227 ASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAES 262
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 99/210 (47%), Gaps = 16/210 (7%)
Query: 346 LGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAYYYS 405
LG+G +G + +T F Q+ +++ ++ +H +V L A S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAVV-S 249
Query: 406 KDEKLLVYDYFASGSLSTLLHGNRGAG-RTPLDWETRVKILLGTARGVAHIHSMGGPKFT 464
++ +V +Y + GSL L G G R P V + A G+A++ M +
Sbjct: 250 EEPIYIVTEYMSKGSLLDFLKGETGKYLRLP----QLVDMAAQIASGMAYVERMN---YV 302
Query: 465 HGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG-----YRAPEVIETRKHSHKS 519
H +++A+N+L+ ++L ++DFGL L+ +R + APE + + KS
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 362
Query: 520 DVYSFGVLLLEMLT-GKAPLQSPTRDDMVD 548
DV+SFG+LL E+ T G+ P +++D
Sbjct: 363 DVWSFGILLTELTTKGRVPYPGMVNREVLD 392
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 125/297 (42%), Gaps = 45/297 (15%)
Query: 346 LGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXR-----DFEQQMEIVGRVGQHPNVVPLR 400
LGKG +G Y A ++S + +++EI + +HPN++ L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLY 77
Query: 401 AYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGG 460
Y++ L+ +Y G++ L + D + + A +++ HS
Sbjct: 78 GYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCHS--- 129
Query: 461 PKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG------YRAPEVIETRK 514
+ H +IK N+L+ + I+DFG + V A SR A Y PE+IE R
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRAALCGTLDYLPPEMIEGRM 185
Query: 515 HSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQ 574
H K D++S GVL E L GK P ++ T + + + R E+T F E R
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR-- 237
Query: 575 NIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSENRPSSEENKSKDSN 631
+++ L + P RP + EV +E + + ++PS+ +NK S
Sbjct: 238 ----DLISRL------LKHNPSQRPMLREV---LEHPWITANSSKPSNCQNKESASK 281
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 88/210 (41%), Gaps = 20/210 (9%)
Query: 344 EVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAYY 403
E +G GSY + V T RD +++EI+ R GQHPN++ L+ Y
Sbjct: 33 ETIGVGSYSECKRCV--HKATNMEYAVKVIDKSKRDPSEEIEILLRYGQHPNIITLKDVY 90
Query: 404 YSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGT-ARGVAHIHSMGGPK 462
LV + G L + R E +L T + V ++HS G
Sbjct: 91 DDGKHVYLVTELMRGGELLDKIL------RQKFFSEREASFVLHTIGKTVEYLHSQG--- 141
Query: 463 FTHGNIKASNVLINQDLDG--C--ISDFGLTPLMNVP----ATPSRSAGYRAPEVIETRK 514
H ++K SN+L + C I DFG + TP +A + APEV++ +
Sbjct: 142 VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQG 201
Query: 515 HSHKSDVYSFGVLLLEMLTGKAPLQSPTRD 544
+ D++S G+LL ML G P + D
Sbjct: 202 YDEGCDIWSLGILLYTMLAGYTPFANGPSD 231
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 91/211 (43%), Gaps = 24/211 (11%)
Query: 346 LGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXR-----DFEQQMEIVGRVGQHPNVVPLR 400
LGKG +G Y A + S + +++EI + +HPN++ L
Sbjct: 16 LGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLY 74
Query: 401 AYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGG 460
Y++ L+ +Y G++ L + D + + A +++ HS
Sbjct: 75 GYFHDSTRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCHS--- 126
Query: 461 PKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG------YRAPEVIETRK 514
K H +IK N+L+ + I+DFG + V A SR A Y PE+IE R
Sbjct: 127 KKVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRAALCGTLDYLPPEMIEGRM 182
Query: 515 HSHKSDVYSFGVLLLEMLTGKAPLQSPTRDD 545
H K D++S GVL E L GK P ++ T D
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQD 213
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 102/233 (43%), Gaps = 25/233 (10%)
Query: 344 EVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGR-----VGQHPNVVP 398
++LGKGS+G + A +++ D + + +V + +HP +
Sbjct: 24 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTH 83
Query: 399 LRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSM 458
+ + +K+ V +Y G L + + + IL G+ +HS
Sbjct: 84 MFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIIL-----GLQFLHSK 138
Query: 459 GGPKFTHGNIKASNVLINQDLDGCISDFGLTPL-MNVPATPSRSAG---YRAPEVIETRK 514
G + ++K N+L+++D I+DFG+ M A + G Y APE++ +K
Sbjct: 139 G---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLGQK 195
Query: 515 HSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVD--------LPRWVQSVVRE 559
++H D +SFGVLL EML G++P +++ PRW++ ++
Sbjct: 196 YNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEAKD 248
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 83/161 (51%), Gaps = 18/161 (11%)
Query: 392 QHPNVVPLRAYYYSKDEKL-LVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTAR 450
+H N+V L + L +V +Y A GSL L R GR+ L + +K L
Sbjct: 72 RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYL---RSRGRSVLGGDCLLKFSLDVCE 128
Query: 451 GVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG-----YR 505
+ ++ G F H ++ A NVL+++D +SDFGLT A+ ++ G +
Sbjct: 129 AMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTK----EASSTQDTGKLPVKWT 181
Query: 506 APEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPL-QSPTRD 544
APE + +K S KSDV+SFG+LL E+ + G+ P + P +D
Sbjct: 182 APEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD 222
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 98/210 (46%), Gaps = 16/210 (7%)
Query: 346 LGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAYYYS 405
LG+G +G + +T F Q+ +++ ++ +H +V L A S
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAVV-S 80
Query: 406 KDEKLLVYDYFASGSLSTLLHGNRGAG-RTPLDWETRVKILLGTARGVAHIHSMGGPKFT 464
++ +V +Y GSL L G G R P V + A G+A++ M +
Sbjct: 81 EEPIYIVTEYMNKGSLLDFLKGETGKYLRLP----QLVDMSAQIASGMAYVERMN---YV 133
Query: 465 HGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG-----YRAPEVIETRKHSHKS 519
H +++A+N+L+ ++L ++DFGL L+ +R + APE + + KS
Sbjct: 134 HRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIKS 193
Query: 520 DVYSFGVLLLEMLT-GKAPLQSPTRDDMVD 548
DV+SFG+LL E+ T G+ P +++D
Sbjct: 194 DVWSFGILLTELTTKGRVPYPGMVNREVLD 223
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 122/275 (44%), Gaps = 33/275 (12%)
Query: 343 AEVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAY 402
E LG G +G + T F + ++ ++ QH +V L A
Sbjct: 20 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL-QHQRLVRLYAV 78
Query: 403 YYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAH-IHSMGGP 461
+++ ++ +Y +GSL L +TP + + LL A +A + +
Sbjct: 79 V-TQEPIYIITEYMENGSLVDFL-------KTPSGIKLTINKLLDMAAQIAEGMAFIEER 130
Query: 462 KFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG-----YRAPEVIETRKHS 516
+ H +++A+N+L++ L I+DFGL L+ +R + APE I +
Sbjct: 131 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFT 190
Query: 517 HKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQN 575
KSDV+SFG+LL E++T G+ P T P +Q++ R ++R N
Sbjct: 191 IKSDVWSFGILLTEIVTHGRIPYPGMTN------PEVIQNLER--------GYRMVRPDN 236
Query: 576 IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEE 610
EE+ Q++++ C + P+ RP D + ++E+
Sbjct: 237 CPEELYQLMRL---CWKERPEDRPTFDYLRSVLED 268
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 98/210 (46%), Gaps = 16/210 (7%)
Query: 346 LGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAYYYS 405
LG+G +G + +T F Q+ +++ ++ +H +V L A S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAVV-S 83
Query: 406 KDEKLLVYDYFASGSLSTLLHGNRGAG-RTPLDWETRVKILLGTARGVAHIHSMGGPKFT 464
++ +V +Y + G L L G G R P V + A G+A++ M +
Sbjct: 84 EEPIYIVMEYMSKGCLLDFLKGEMGKYLRLP----QLVDMAAQIASGMAYVERM---NYV 136
Query: 465 HGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG-----YRAPEVIETRKHSHKS 519
H +++A+N+L+ ++L ++DFGL L+ +R + APE + + KS
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 520 DVYSFGVLLLEMLT-GKAPLQSPTRDDMVD 548
DV+SFG+LL E+ T G+ P +++D
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVLD 226
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 122/275 (44%), Gaps = 33/275 (12%)
Query: 343 AEVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAY 402
E LG G +G + T F + ++ ++ QH +V L A
Sbjct: 26 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL-QHQRLVRLYAV 84
Query: 403 YYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAH-IHSMGGP 461
+++ ++ +Y +GSL L +TP + + LL A +A + +
Sbjct: 85 V-TQEPIYIITEYMENGSLVDFL-------KTPSGIKLTINKLLDMAAQIAEGMAFIEER 136
Query: 462 KFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG-----YRAPEVIETRKHS 516
+ H +++A+N+L++ L I+DFGL L+ +R + APE I +
Sbjct: 137 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFT 196
Query: 517 HKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQN 575
KSDV+SFG+LL E++T G+ P T P +Q++ R ++R N
Sbjct: 197 IKSDVWSFGILLTEIVTHGRIPYPGMTN------PEVIQNLER--------GYRMVRPDN 242
Query: 576 IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEE 610
EE+ Q++++ C + P+ RP D + ++E+
Sbjct: 243 CPEELYQLMRL---CWKERPEDRPTFDYLRSVLED 274
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 98/210 (46%), Gaps = 16/210 (7%)
Query: 346 LGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAYYYS 405
LG+G +G + +T F Q+ +++ ++ +H +V L A S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAVV-S 83
Query: 406 KDEKLLVYDYFASGSLSTLLHGNRGAG-RTPLDWETRVKILLGTARGVAHIHSMGGPKFT 464
++ +V +Y + GSL L G G R P V + A G+A++ M +
Sbjct: 84 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP----QLVDMAAQIASGMAYVERM---NYV 136
Query: 465 HGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG-----YRAPEVIETRKHSHKS 519
H ++ A+N+L+ ++L ++DFGL L+ +R + APE + + KS
Sbjct: 137 HRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 520 DVYSFGVLLLEMLT-GKAPLQSPTRDDMVD 548
DV+SFG+LL E+ T G+ P +++D
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVLD 226
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 122/275 (44%), Gaps = 33/275 (12%)
Query: 343 AEVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAY 402
E LG G +G + T F + ++ ++ QH +V L A
Sbjct: 18 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL-QHQRLVRLYAV 76
Query: 403 YYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAH-IHSMGGP 461
+++ ++ +Y +GSL L +TP + + LL A +A + +
Sbjct: 77 V-TQEPIYIITEYMENGSLVDFL-------KTPSGIKLTINKLLDMAAQIAEGMAFIEER 128
Query: 462 KFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG-----YRAPEVIETRKHS 516
+ H +++A+N+L++ L I+DFGL L+ +R + APE I +
Sbjct: 129 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFT 188
Query: 517 HKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQN 575
KSDV+SFG+LL E++T G+ P T P +Q++ R ++R N
Sbjct: 189 IKSDVWSFGILLTEIVTHGRIPYPGMTN------PEVIQNLER--------GYRMVRPDN 234
Query: 576 IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEE 610
EE+ Q++++ C + P+ RP D + ++E+
Sbjct: 235 CPEELYQLMRL---CWKERPEDRPTFDYLRSVLED 266
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 122/275 (44%), Gaps = 33/275 (12%)
Query: 343 AEVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAY 402
E LG G +G + T F + ++ ++ QH +V L A
Sbjct: 24 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL-QHQRLVRLYAV 82
Query: 403 YYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAH-IHSMGGP 461
+++ ++ +Y +GSL L +TP + + LL A +A + +
Sbjct: 83 V-TQEPIYIITEYMENGSLVDFL-------KTPSGIKLTINKLLDMAAQIAEGMAFIEER 134
Query: 462 KFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG-----YRAPEVIETRKHS 516
+ H +++A+N+L++ L I+DFGL L+ +R + APE I +
Sbjct: 135 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFT 194
Query: 517 HKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQN 575
KSDV+SFG+LL E++T G+ P T P +Q++ R ++R N
Sbjct: 195 IKSDVWSFGILLTEIVTHGRIPYPGMTN------PEVIQNLER--------GYRMVRPDN 240
Query: 576 IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEE 610
EE+ Q++++ C + P+ RP D + ++E+
Sbjct: 241 CPEELYQLMRL---CWKERPEDRPTFDYLRSVLED 272
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 122/275 (44%), Gaps = 33/275 (12%)
Query: 343 AEVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAY 402
E LG G +G + T F + ++ ++ QH +V L A
Sbjct: 19 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL-QHQRLVRLYAV 77
Query: 403 YYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAH-IHSMGGP 461
+++ ++ +Y +GSL L +TP + + LL A +A + +
Sbjct: 78 V-TQEPIYIITEYMENGSLVDFL-------KTPSGIKLTINKLLDMAAQIAEGMAFIEER 129
Query: 462 KFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG-----YRAPEVIETRKHS 516
+ H +++A+N+L++ L I+DFGL L+ +R + APE I +
Sbjct: 130 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFT 189
Query: 517 HKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQN 575
KSDV+SFG+LL E++T G+ P T P +Q++ R ++R N
Sbjct: 190 IKSDVWSFGILLTEIVTHGRIPYPGMTN------PEVIQNLER--------GYRMVRPDN 235
Query: 576 IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEE 610
EE+ Q++++ C + P+ RP D + ++E+
Sbjct: 236 CPEELYQLMRL---CWKERPEDRPTFDYLRSVLED 267
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 83/161 (51%), Gaps = 18/161 (11%)
Query: 392 QHPNVVPLRAYYYSKDEKL-LVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTAR 450
+H N+V L + L +V +Y A GSL L R GR+ L + +K L
Sbjct: 57 RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYL---RSRGRSVLGGDCLLKFSLDVCE 113
Query: 451 GVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG-----YR 505
+ ++ G F H ++ A NVL+++D +SDFGLT A+ ++ G +
Sbjct: 114 AMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTK----EASSTQDTGKLPVKWT 166
Query: 506 APEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPL-QSPTRD 544
APE + +K S KSDV+SFG+LL E+ + G+ P + P +D
Sbjct: 167 APEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD 207
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 99/210 (47%), Gaps = 16/210 (7%)
Query: 346 LGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAYYYS 405
LG+G +G + +T F Q+ +++ ++ +H +V L A S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAVV-S 249
Query: 406 KDEKLLVYDYFASGSLSTLLHGNRGAG-RTPLDWETRVKILLGTARGVAHIHSMGGPKFT 464
++ +V +Y + GSL L G G R P V + A G+A++ M +
Sbjct: 250 EEPIYIVGEYMSKGSLLDFLKGETGKYLRLP----QLVDMAAQIASGMAYVERMN---YV 302
Query: 465 HGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG-----YRAPEVIETRKHSHKS 519
H +++A+N+L+ ++L ++DFGL L+ +R + APE + + KS
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 362
Query: 520 DVYSFGVLLLEMLT-GKAPLQSPTRDDMVD 548
DV+SFG+LL E+ T G+ P +++D
Sbjct: 363 DVWSFGILLTELTTKGRVPYPGMVNREVLD 392
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 122/275 (44%), Gaps = 33/275 (12%)
Query: 343 AEVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAY 402
E LG G +G + T F + ++ ++ QH +V L A
Sbjct: 27 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL-QHQRLVRLYAV 85
Query: 403 YYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAH-IHSMGGP 461
+++ ++ +Y +GSL L +TP + + LL A +A + +
Sbjct: 86 V-TQEPIYIITEYMENGSLVDFL-------KTPSGIKLTINKLLDMAAQIAEGMAFIEER 137
Query: 462 KFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG-----YRAPEVIETRKHS 516
+ H +++A+N+L++ L I+DFGL L+ +R + APE I +
Sbjct: 138 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFT 197
Query: 517 HKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQN 575
KSDV+SFG+LL E++T G+ P T P +Q++ R ++R N
Sbjct: 198 IKSDVWSFGILLTEIVTHGRIPYPGMTN------PEVIQNLER--------GYRMVRPDN 243
Query: 576 IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEE 610
EE+ Q++++ C + P+ RP D + ++E+
Sbjct: 244 CPEELYQLMRL---CWKERPEDRPTFDYLRSVLED 275
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 102/233 (43%), Gaps = 25/233 (10%)
Query: 344 EVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGR-----VGQHPNVVP 398
++LGKGS+G + A +++ D + + +V + +HP +
Sbjct: 23 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTH 82
Query: 399 LRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSM 458
+ + +K+ V +Y G L + + + IL G+ +HS
Sbjct: 83 MFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIIL-----GLQFLHSK 137
Query: 459 GGPKFTHGNIKASNVLINQDLDGCISDFGLTPL-MNVPATPSRSAG---YRAPEVIETRK 514
G + ++K N+L+++D I+DFG+ M A + G Y APE++ +K
Sbjct: 138 G---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLGQK 194
Query: 515 HSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVD--------LPRWVQSVVRE 559
++H D +SFGVLL EML G++P +++ PRW++ ++
Sbjct: 195 YNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEAKD 247
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 99/210 (47%), Gaps = 16/210 (7%)
Query: 346 LGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAYYYS 405
LG+G +G + +T F Q+ +++ ++ +H +V L A S
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAVV-S 80
Query: 406 KDEKLLVYDYFASGSLSTLLHGNRGAG-RTPLDWETRVKILLGTARGVAHIHSMGGPKFT 464
++ +V +Y GSL L G G R P + +I A G+A++ M +
Sbjct: 81 EEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQI----ASGMAYVERMN---YV 133
Query: 465 HGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG-----YRAPEVIETRKHSHKS 519
H +++A+N+L+ ++L ++DFGL L+ +R + APE + + KS
Sbjct: 134 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 193
Query: 520 DVYSFGVLLLEMLT-GKAPLQSPTRDDMVD 548
DV+SFG+LL E+ T G+ P +++D
Sbjct: 194 DVWSFGILLTELTTKGRVPYPGMVNREVLD 223
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 122/275 (44%), Gaps = 33/275 (12%)
Query: 343 AEVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAY 402
E LG G +G + T F + ++ ++ QH +V L A
Sbjct: 18 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL-QHQRLVRLYAV 76
Query: 403 YYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAH-IHSMGGP 461
+++ ++ +Y +GSL L +TP + + LL A +A + +
Sbjct: 77 V-TQEPIYIITEYMENGSLVDFL-------KTPSGIKLTINKLLDMAAQIAEGMAFIEER 128
Query: 462 KFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG-----YRAPEVIETRKHS 516
+ H +++A+N+L++ L I+DFGL L+ +R + APE I +
Sbjct: 129 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFT 188
Query: 517 HKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQN 575
KSDV+SFG+LL E++T G+ P T P +Q++ R ++R N
Sbjct: 189 IKSDVWSFGILLTEIVTHGRIPYPGMTN------PEVIQNLER--------GYRMVRPDN 234
Query: 576 IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEE 610
EE+ Q++++ C + P+ RP D + ++E+
Sbjct: 235 CPEELYQLMRL---CWKERPEDRPTFDYLRSVLED 266
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 120/271 (44%), Gaps = 31/271 (11%)
Query: 346 LGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAYYYS 405
LG G +G + A + T F + ++ + QH +V L A +
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVM-KTLQHDKLVKLHAVV-T 80
Query: 406 KDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTH 465
K+ ++ ++ A GSL L + G+ + PL + A G+A I + H
Sbjct: 81 KEPIYIITEFMAKGSLLDFLKSDEGS-KQPLP--KLIDFSAQIAEGMAFIEQRN---YIH 134
Query: 466 GNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG-----YRAPEVIETRKHSHKSD 520
+++A+N+L++ L I+DFGL ++ +R + APE I + KSD
Sbjct: 135 RDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSD 194
Query: 521 VYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEE 579
V+SFG+LL+E++T G+ P + P ++++ R + R +N EE
Sbjct: 195 VWSFGILLMEIVTYGRIPYPGMSN------PEVIRALER--------GYRMPRPENCPEE 240
Query: 580 MVQMLQIGMACVAKVPDMRPNMDEVVRMIEE 610
+ ++ M C P+ RP + + ++++
Sbjct: 241 LYNIM---MRCWKNRPEERPTFEYIQSVLDD 268
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 122/275 (44%), Gaps = 33/275 (12%)
Query: 343 AEVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAY 402
E LG G +G + T F + ++ ++ QH +V L A
Sbjct: 13 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL-QHQRLVRLYAV 71
Query: 403 YYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAH-IHSMGGP 461
+++ ++ +Y +GSL L +TP + + LL A +A + +
Sbjct: 72 V-TQEPIYIITEYMENGSLVDFL-------KTPSGIKLTINKLLDMAAQIAEGMAFIEER 123
Query: 462 KFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG-----YRAPEVIETRKHS 516
+ H +++A+N+L++ L I+DFGL L+ +R + APE I +
Sbjct: 124 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFT 183
Query: 517 HKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQN 575
KSDV+SFG+LL E++T G+ P T P +Q++ R ++R N
Sbjct: 184 IKSDVWSFGILLTEIVTHGRIPYPGMTN------PEVIQNLER--------GYRMVRPDN 229
Query: 576 IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEE 610
EE+ Q++++ C + P+ RP D + ++E+
Sbjct: 230 CPEELYQLMRL---CWKERPEDRPTFDYLRSVLED 261
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 113/276 (40%), Gaps = 33/276 (11%)
Query: 346 LGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAYYYS 405
+G G +G + DF ++ E++ ++ HP +V L
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDDFIEEAEVMMKL-SHPKLVQLYGVCLE 93
Query: 406 KDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTH 465
+ LV+++ G LS L RG ET + + L G+A++ H
Sbjct: 94 QAPICLVFEFMEHGCLSDYLRTQRGLFAA----ETLLGMCLDVCEGMAYLEE---ACVIH 146
Query: 466 GNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG-----YRAPEVIETRKHSHKSD 520
++ A N L+ ++ +SDFG+T + S + + +PEV ++S KSD
Sbjct: 147 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 206
Query: 521 VYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVEL-MRFQNIEE 578
V+SFGVL+ E+ + GK P ++ + ++V+ D+ R
Sbjct: 207 VWSFGVLMWEVFSEGKIPYENRSNSEVVE------------------DISTGFRLYKPRL 248
Query: 579 EMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQS 614
+ QI C + P+ RP ++R + E+ +S
Sbjct: 249 ASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAES 284
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 98/210 (46%), Gaps = 16/210 (7%)
Query: 346 LGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAYYYS 405
LG+G +G + +T F Q+ +++ ++ +H +V L A S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAVV-S 83
Query: 406 KDEKLLVYDYFASGSLSTLLHGNRGAG-RTPLDWETRVKILLGTARGVAHIHSMGGPKFT 464
++ +V +Y + G L L G G R P V + A G+A++ M +
Sbjct: 84 EEPIYIVTEYMSKGCLLDFLKGEMGKYLRLP----QLVDMAAQIASGMAYVERM---NYV 136
Query: 465 HGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG-----YRAPEVIETRKHSHKS 519
H +++A+N+L+ ++L ++DFGL L+ +R + APE + + KS
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 520 DVYSFGVLLLEMLT-GKAPLQSPTRDDMVD 548
DV+SFG+LL E+ T G+ P +++D
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVLD 226
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 98/209 (46%), Gaps = 14/209 (6%)
Query: 346 LGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAYYYS 405
LG+G +G + +T F Q+ +++ ++ +H +V L A S
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAVV-S 332
Query: 406 KDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTH 465
++ +V +Y + GSL L G G L V + A G+A++ M + H
Sbjct: 333 EEPIYIVTEYMSKGSLLDFLKGETGKY---LRLPQLVDMAAQIASGMAYVERM---NYVH 386
Query: 466 GNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG-----YRAPEVIETRKHSHKSD 520
+++A+N+L+ ++L ++DFGL L+ +R + APE + + KSD
Sbjct: 387 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 446
Query: 521 VYSFGVLLLEMLT-GKAPLQSPTRDDMVD 548
V+SFG+LL E+ T G+ P +++D
Sbjct: 447 VWSFGILLTELTTKGRVPYPGMVNREVLD 475
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 126/295 (42%), Gaps = 41/295 (13%)
Query: 346 LGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXR-----DFEQQMEIVGRVGQHPNVVPLR 400
LGKG +G Y A ++S + +++EI + +HPN++ L
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLY 75
Query: 401 AYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGG 460
Y++ L+ +Y G++ L + D + + A +++ HS
Sbjct: 76 GYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCHS--- 127
Query: 461 PKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA----TPSRSAGYRAPEVIETRKHS 516
+ H +IK N+L+ + I+DFG + + P+ T S + Y PE+IE R H
Sbjct: 128 KRVIHRDIKPENLLLGSAGELKIADFGWS--CHAPSSRRTTLSGTLDYLPPEMIEGRMHD 185
Query: 517 HKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNI 576
K D++S GVL E L GK P ++ T + + + R E+T F E R
Sbjct: 186 EKVDLWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR---- 235
Query: 577 EEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSENRPSSEENKSKDSN 631
+++ L + P RP + EV +E + + ++PS+ +NK S
Sbjct: 236 --DLISRL------LKHNPSQRPMLREV---LEHPWITANSSKPSNSQNKESASK 279
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 94/209 (44%), Gaps = 20/209 (9%)
Query: 346 LGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRD-----FEQQMEIVGRVGQHPNVVPLR 400
LGKG +G Y A ++S ++ +++EI + HPN++ L
Sbjct: 31 LGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHL-HHPNILRLY 89
Query: 401 AYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGG 460
Y+Y + L+ +Y G L L + D + I+ A + + H G
Sbjct: 90 NYFYDRRRIYLILEYAPRGELYKELQKS-----CTFDEQRTATIMEELADALMYCH---G 141
Query: 461 PKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSA----GYRAPEVIETRKHS 516
K H +IK N+L+ + I+DFG + ++ P+ ++ Y PE+IE R H+
Sbjct: 142 KKVIHRDIKPENLLLGLKGELKIADFGWS--VHAPSLRRKTMCGTLDYLPPEMIEGRMHN 199
Query: 517 HKSDVYSFGVLLLEMLTGKAPLQSPTRDD 545
K D++ GVL E+L G P +S + ++
Sbjct: 200 EKVDLWCIGVLCYELLVGNPPFESASHNE 228
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 122/275 (44%), Gaps = 33/275 (12%)
Query: 343 AEVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAY 402
E LG G +G + T F + ++ ++ QH +V L A
Sbjct: 18 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL-QHQRLVRLYAV 76
Query: 403 YYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAH-IHSMGGP 461
+++ ++ +Y +GSL L +TP + + LL A +A + +
Sbjct: 77 V-TQEPIYIITEYMENGSLVDFL-------KTPSGIKLTINKLLDMAAQIAEGMAFIEER 128
Query: 462 KFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG-----YRAPEVIETRKHS 516
+ H +++A+N+L++ L I+DFGL L+ +R + APE I +
Sbjct: 129 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFT 188
Query: 517 HKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQN 575
KSDV+SFG+LL E++T G+ P T P +Q++ R ++R N
Sbjct: 189 IKSDVWSFGILLTEIVTHGRIPYPGMTN------PEVIQNLER--------GYRMVRPDN 234
Query: 576 IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEE 610
EE+ Q++++ C + P+ RP D + ++E+
Sbjct: 235 CPEELYQLMRL---CWKERPEDRPTFDYLRSVLED 266
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 122/275 (44%), Gaps = 33/275 (12%)
Query: 343 AEVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAY 402
E LG G +G + T F + ++ ++ QH +V L A
Sbjct: 23 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL-QHQRLVRLYAV 81
Query: 403 YYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAH-IHSMGGP 461
+++ ++ +Y +GSL L +TP + + LL A +A + +
Sbjct: 82 V-TQEPIYIITEYMENGSLVDFL-------KTPSGIKLTINKLLDMAAQIAEGMAFIEER 133
Query: 462 KFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG-----YRAPEVIETRKHS 516
+ H +++A+N+L++ L I+DFGL L+ +R + APE I +
Sbjct: 134 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFT 193
Query: 517 HKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQN 575
KSDV+SFG+LL E++T G+ P T P +Q++ R ++R N
Sbjct: 194 IKSDVWSFGILLTEIVTHGRIPYPGMTN------PEVIQNLER--------GYRMVRPDN 239
Query: 576 IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEE 610
EE+ Q++++ C + P+ RP D + ++E+
Sbjct: 240 CPEELYQLMRL---CWKERPEDRPTFDYLRSVLED 271
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 99/210 (47%), Gaps = 16/210 (7%)
Query: 346 LGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAYYYS 405
LG+G +G + +T F Q+ +++ ++ +H +V L A S
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEAFLQEAQVMKKL-RHEKLVQLYAVV-S 250
Query: 406 KDEKLLVYDYFASGSLSTLLHGNRGAG-RTPLDWETRVKILLGTARGVAHIHSMGGPKFT 464
++ +V +Y + GSL L G G R P V + A G+A++ M +
Sbjct: 251 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP----QLVDMAAQIASGMAYVERM---NYV 303
Query: 465 HGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG-----YRAPEVIETRKHSHKS 519
H +++A+N+L+ ++L ++DFGL L+ +R + APE + + KS
Sbjct: 304 HRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 363
Query: 520 DVYSFGVLLLEMLT-GKAPLQSPTRDDMVD 548
DV+SFG+LL E+ T G+ P +++D
Sbjct: 364 DVWSFGILLTELTTKGRVPYPGMVNREVLD 393
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 124/275 (45%), Gaps = 38/275 (13%)
Query: 346 LGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAYYYS 405
LG G +G + ST + F ++ ++ + QH +V L A
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLM-KTLQHDKLVRLYAVVTK 78
Query: 406 KDEKLLVYDYFASGSLSTLLHGNRGAGRTPL----DWETRVKILLGTARGVAHIHSMGGP 461
++ ++ ++ A GSL L + G G+ L D+ ++ A G+A+I
Sbjct: 79 EEPIYIITEFMAKGSLLDFLKSDEG-GKVLLPKLIDFSAQI------AEGMAYIER---K 128
Query: 462 KFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG-----YRAPEVIETRKHS 516
+ H +++A+NVL+++ L I+DFGL ++ +R + APE I +
Sbjct: 129 NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFT 188
Query: 517 HKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQN 575
KS+V+SFG+LL E++T GK P T D V S + + + + R +N
Sbjct: 189 IKSNVWSFGILLYEIVTYGKIPYPGRTNAD-------VMSALSQGY-------RMPRMEN 234
Query: 576 IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEE 610
+E+ ++++ C + + RP D + ++++
Sbjct: 235 CPDELYDIMKM---CWKEKAEERPTFDYLQSVLDD 266
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 122/275 (44%), Gaps = 33/275 (12%)
Query: 343 AEVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAY 402
E LG G +G + T F + ++ ++ QH +V L A
Sbjct: 24 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL-QHQRLVRLYAV 82
Query: 403 YYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAH-IHSMGGP 461
+++ ++ +Y +GSL L +TP + + LL A +A + +
Sbjct: 83 V-TQEPIYIITEYMENGSLVDFL-------KTPSGIKLTINKLLDMAAQIAEGMAFIEER 134
Query: 462 KFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG-----YRAPEVIETRKHS 516
+ H +++A+N+L++ L I+DFGL L+ +R + APE I +
Sbjct: 135 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFT 194
Query: 517 HKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQN 575
KSDV+SFG+LL E++T G+ P T P +Q++ R ++R N
Sbjct: 195 IKSDVWSFGILLTEIVTHGRIPYPGMTN------PEVIQNLER--------GYRMVRPDN 240
Query: 576 IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEE 610
EE+ Q++++ C + P+ RP D + ++E+
Sbjct: 241 CPEELYQLMRL---CWKERPEDRPTFDYLRSVLED 272
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 122/275 (44%), Gaps = 33/275 (12%)
Query: 343 AEVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAY 402
E LG G +G + T F + ++ ++ QH +V L A
Sbjct: 28 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL-QHQRLVRLYAV 86
Query: 403 YYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAH-IHSMGGP 461
+++ ++ +Y +GSL L +TP + + LL A +A + +
Sbjct: 87 V-TQEPIYIITEYMENGSLVDFL-------KTPSGIKLTINKLLDMAAQIAEGMAFIEER 138
Query: 462 KFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG-----YRAPEVIETRKHS 516
+ H +++A+N+L++ L I+DFGL L+ +R + APE I +
Sbjct: 139 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFT 198
Query: 517 HKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQN 575
KSDV+SFG+LL E++T G+ P T P +Q++ R ++R N
Sbjct: 199 IKSDVWSFGILLTEIVTHGRIPYPGMTN------PEVIQNLER--------GYRMVRPDN 244
Query: 576 IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEE 610
EE+ Q++++ C + P+ RP D + ++E+
Sbjct: 245 CPEELYQLMRL---CWKERPEDRPTFDYLRSVLED 276
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 97/211 (45%), Gaps = 23/211 (10%)
Query: 346 LGKGSYGTAYKAV---LEEST---TXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPL 399
LGKG++G+ L+++T RDFE+++EI+ + QH N+V
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHDNIVKY 77
Query: 400 RAYYYSKDEK--LLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHS 457
+ YS + L+ +Y GSL L ++ +D +K+L T++ +
Sbjct: 78 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK----ERID---HIKLLQYTSQICKGMEY 130
Query: 458 MGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM-------NVPATPSRSAGYRAPEVI 510
+G ++ H N+ N+L+ + I DFGLT ++ V + APE +
Sbjct: 131 LGTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESL 190
Query: 511 ETRKHSHKSDVYSFGVLLLEMLTGKAPLQSP 541
K S SDV+SFGV+L E+ T +SP
Sbjct: 191 TESKFSVASDVWSFGVVLYELFTYIEKSKSP 221
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 120/271 (44%), Gaps = 31/271 (11%)
Query: 346 LGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAYYYS 405
LG G +G + A + T F + ++ + QH +V L A +
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVM-KTLQHDKLVKLHAVV-T 253
Query: 406 KDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTH 465
K+ ++ ++ A GSL L + G+ + PL + A G+A I + H
Sbjct: 254 KEPIYIITEFMAKGSLLDFLKSDEGS-KQPLP--KLIDFSAQIAEGMAFIEQRN---YIH 307
Query: 466 GNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG-----YRAPEVIETRKHSHKSD 520
+++A+N+L++ L I+DFGL ++ +R + APE I + KSD
Sbjct: 308 RDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSD 367
Query: 521 VYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEE 579
V+SFG+LL+E++T G+ P + P ++++ R + R +N EE
Sbjct: 368 VWSFGILLMEIVTYGRIPYPGMSN------PEVIRALER--------GYRMPRPENCPEE 413
Query: 580 MVQMLQIGMACVAKVPDMRPNMDEVVRMIEE 610
+ ++ M C P+ RP + + ++++
Sbjct: 414 LYNIM---MRCWKNRPEERPTFEYIQSVLDD 441
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 131/300 (43%), Gaps = 36/300 (12%)
Query: 328 GCSYNFDLEDLLRASAEV---LGKGSYGTAYKAVLEE-STTXXXXXXXXXXXXXRDFEQQ 383
G S N+D ++ R + LG G YG Y+ V ++ S T +F ++
Sbjct: 1 GMSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKE 60
Query: 384 MEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVK 443
++ + +HPN+V L + ++ ++ G+L L R R E
Sbjct: 61 AAVMKEI-KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQ----EVNAV 112
Query: 444 ILLGTARGVAH-IHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN-----VPAT 497
+LL A ++ + + F H ++ A N L+ ++ ++DFGL+ LM PA
Sbjct: 113 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAG 172
Query: 498 PSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSV 556
+ APE + K S KSDV++FGVLL E+ T G +P +DL + + +
Sbjct: 173 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG------IDLSQVYELL 226
Query: 557 VREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDS 616
+ D + R + E++ ++++ AC P RP+ E+ + E + Q S
Sbjct: 227 EK--------DYRMERPEGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFETMFQESS 275
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 93/209 (44%), Gaps = 14/209 (6%)
Query: 346 LGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAYYYS 405
+G G +G + DF ++ E++ ++ HP +V L
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLS-HPKLVQLYGVCLE 73
Query: 406 KDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTH 465
+ LV+++ G LS L RG ET + + L G+A++ H
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQRGLFAA----ETLLGMCLDVCEGMAYLEE---ASVIH 126
Query: 466 GNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG-----YRAPEVIETRKHSHKSD 520
++ A N L+ ++ +SDFG+T + S + + +PEV ++S KSD
Sbjct: 127 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 186
Query: 521 VYSFGVLLLEMLT-GKAPLQSPTRDDMVD 548
V+SFGVL+ E+ + GK P ++ + ++V+
Sbjct: 187 VWSFGVLMWEVFSEGKIPYENRSNSEVVE 215
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 108/226 (47%), Gaps = 32/226 (14%)
Query: 392 QHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARG 451
QH +V L A +++ ++ +Y +GSL L +TP + + LL A
Sbjct: 66 QHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFL-------KTPSGIKLTINKLLDMAAQ 117
Query: 452 VAH-IHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG-----YR 505
+A + + + H +++A+N+L++ L I+DFGL L+ +R +
Sbjct: 118 IAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWT 177
Query: 506 APEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAE 564
APE I + KSDV+SFG+LL E++T G+ P T P +Q++ R
Sbjct: 178 APEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN------PEVIQNLER------ 225
Query: 565 VFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEE 610
++R N EE+ Q++++ C + P+ RP D + ++E+
Sbjct: 226 --GYRMVRPDNCPEELYQLMRL---CWKERPEDRPTFDYLRSVLED 266
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 83/161 (51%), Gaps = 18/161 (11%)
Query: 392 QHPNVVPLRAYYYSKDEKL-LVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTAR 450
+H N+V L + L +V +Y A GSL L R GR+ L + +K L
Sbjct: 244 RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYL---RSRGRSVLGGDCLLKFSLDVCE 300
Query: 451 GVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG-----YR 505
+ ++ G F H ++ A NVL+++D +SDFGLT A+ ++ G +
Sbjct: 301 AMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTK----EASSTQDTGKLPVKWT 353
Query: 506 APEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPL-QSPTRD 544
APE + +K S KSDV+SFG+LL E+ + G+ P + P +D
Sbjct: 354 APEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD 394
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 137/336 (40%), Gaps = 55/336 (16%)
Query: 307 PKEEFGSGVQEPEKNKLVFFEGCSYNFDLEDLLRASAEVLGKGSYGTAYKAVLEESTTXX 366
P+EE S + E K + LED LGKG +G Y A ++S
Sbjct: 13 PEEELASKQKNEESKK--------RQWALEDF--EIGRPLGKGKFGNVYLAREKQSKFIL 62
Query: 367 XXXXXXXXXXXR-----DFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSL 421
+ +++EI + +HPN++ L Y++ L+ +Y G++
Sbjct: 63 ALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLYGYFHDATRVYLILEYAPLGTV 121
Query: 422 STLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDG 481
L + D + + A +++ HS + H +IK N+L+ +
Sbjct: 122 YRELQK-----LSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGEL 173
Query: 482 CISDFGLTPLMNVPATPSR------SAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGK 535
I+DFG + V A SR + Y PE+IE R H K D++S GVL E L GK
Sbjct: 174 KIADFGWS----VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 229
Query: 536 APLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVP 595
P ++ T + + + R E+T F E R +++ L + P
Sbjct: 230 PPFEANTYQET------YKRISRVEFTFPDFVTEGAR------DLISRL------LKHNP 271
Query: 596 DMRPNMDEVVRMIEEVRQSDSENRPSSEENKSKDSN 631
RP + EV +E + + ++PS+ +NK S
Sbjct: 272 SQRPMLREV---LEHPWITANSSKPSNCQNKESASK 304
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 137/336 (40%), Gaps = 55/336 (16%)
Query: 307 PKEEFGSGVQEPEKNKLVFFEGCSYNFDLEDLLRASAEVLGKGSYGTAYKAVLEESTTXX 366
P+EE S + E K + LED LGKG +G Y A ++S
Sbjct: 13 PEEELASKQKNEESKK--------RQWALEDF--EIGRPLGKGKFGNVYLAREKQSKFIL 62
Query: 367 XXXXXXXXXXXR-----DFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSL 421
+ +++EI + +HPN++ L Y++ L+ +Y G++
Sbjct: 63 ALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLYGYFHDATRVYLILEYAPLGTV 121
Query: 422 STLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDG 481
L + D + + A +++ HS + H +IK N+L+ +
Sbjct: 122 YRELQK-----LSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGEL 173
Query: 482 CISDFGLTPLMNVPATPSR------SAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGK 535
I+DFG + V A SR + Y PE+IE R H K D++S GVL E L GK
Sbjct: 174 KIADFGWS----VHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 229
Query: 536 APLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVP 595
P ++ T + + + R E+T F E R +++ L + P
Sbjct: 230 PPFEANTYQET------YKRISRVEFTFPDFVTEGAR------DLISRL------LKHNP 271
Query: 596 DMRPNMDEVVRMIEEVRQSDSENRPSSEENKSKDSN 631
RP + EV +E + + ++PS+ +NK S
Sbjct: 272 SQRPMLREV---LEHPWITANSSKPSNCQNKESASK 304
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 116/278 (41%), Gaps = 35/278 (12%)
Query: 298 ASSGGRSEKPKEEFGSGVQ-EPEKNKLVFFEGCSYNFDLEDLLRASAEVLGKGSYGTAYK 356
A G S P E GSG+Q +N F + C ++ D++ LG+G++G +
Sbjct: 2 AMGSGSSLSPTEGKGSGLQGHIIENPQYFSDACVHHIKRRDIVLKWE--LGEGAFGKVFL 59
Query: 357 AVL-------EESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEK 409
A ++ +DF+++ E++ + QH ++V
Sbjct: 60 AECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTML-QHQHIVRFFGVCTEGRPL 118
Query: 410 LLVYDYFASGSL----------STLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMG 459
L+V++Y G L + LL G PL + + A G+ + +
Sbjct: 119 LMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVY---LA 175
Query: 460 GPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAGYRA--------PEVIE 511
G F H ++ N L+ Q L I DFG++ ++ +T G R PE I
Sbjct: 176 GLHFVHRDLATRNCLVGQGLVVKIGDFGMS--RDIYSTDYYRVGGRTMLPIRWMPPESIL 233
Query: 512 TRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVD 548
RK + +SDV+SFGV+L E+ T GK P + + +D
Sbjct: 234 YRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAID 271
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 23/211 (10%)
Query: 346 LGKGSYGTAYKAV---LEEST---TXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPL 399
LGKG++G+ L+++T RDFE+++EI+ + QH N+V
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHDNIVKY 79
Query: 400 RAYYYSKDEK--LLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHS 457
+ YS + L+ +Y GSL L + A R +K+L T++ +
Sbjct: 80 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQAH--AERI-----DHIKLLQYTSQICKGMEY 132
Query: 458 MGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM-------NVPATPSRSAGYRAPEVI 510
+G ++ H ++ N+L+ + I DFGLT ++ V + APE +
Sbjct: 133 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 192
Query: 511 ETRKHSHKSDVYSFGVLLLEMLTGKAPLQSP 541
K S SDV+SFGV+L E+ T +SP
Sbjct: 193 TESKFSVASDVWSFGVVLYELFTYIEKSKSP 223
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 137/335 (40%), Gaps = 55/335 (16%)
Query: 307 PKEEFGSGVQEPEKNKLVFFEGCSYNFDLEDLLRASAEVLGKGSYGTAYKAVLEESTTXX 366
P+EE S + E K + LED LGKG +G Y A ++S
Sbjct: 4 PEEELASKQKNEESKK--------RQWALEDF--EIGRPLGKGKFGNVYLAREKQSKFIL 53
Query: 367 XXXXXXXXXXXR-----DFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSL 421
+ +++EI + +HPN++ L Y++ L+ +Y G++
Sbjct: 54 ALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLYGYFHDATRVYLILEYAPLGTV 112
Query: 422 STLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDG 481
L + D + + A +++ HS + H +IK N+L+ +
Sbjct: 113 YRELQK-----LSKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGEL 164
Query: 482 CISDFGLTPLMNVPATPSR------SAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGK 535
I+DFG + V A SR + Y PE+IE R H K D++S GVL E L GK
Sbjct: 165 KIADFGWS----VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 220
Query: 536 APLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVP 595
P ++ T + + + R E+T F E R +++ L + P
Sbjct: 221 PPFEANTYQET------YKRISRVEFTFPDFVTEGAR------DLISRL------LKHNP 262
Query: 596 DMRPNMDEVVRMIEEVRQSDSENRPSSEENKSKDS 630
RP + EV +E + + ++PS+ +NK S
Sbjct: 263 SQRPMLREV---LEHPWITANSSKPSNCQNKESAS 294
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 125/297 (42%), Gaps = 45/297 (15%)
Query: 346 LGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXR-----DFEQQMEIVGRVGQHPNVVPLR 400
LGKG +G Y A ++S + +++EI + +HPN++ L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLY 74
Query: 401 AYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGG 460
Y++ L+ +Y G++ L + D + + A +++ HS
Sbjct: 75 GYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCHS--- 126
Query: 461 PKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR------SAGYRAPEVIETRK 514
+ H +IK N+L+ + I+DFG + V A SR + Y PE+IE R
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTTLCGTLDYLPPEMIEGRM 182
Query: 515 HSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQ 574
H K D++S GVL E L GK P ++ T + + + R E+T F E R
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR-- 234
Query: 575 NIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSENRPSSEENKSKDSN 631
+++ L + P RP + EV +E + + ++PS+ +NK S
Sbjct: 235 ----DLISRL------LKHNPSQRPMLREV---LEHPWITANSSKPSNCQNKESASK 278
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 125/297 (42%), Gaps = 45/297 (15%)
Query: 346 LGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXR-----DFEQQMEIVGRVGQHPNVVPLR 400
LGKG +G Y A ++S + +++EI + +HPN++ L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLY 74
Query: 401 AYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGG 460
Y++ L+ +Y G++ L + D + + A +++ HS
Sbjct: 75 GYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCHS--- 126
Query: 461 PKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR------SAGYRAPEVIETRK 514
+ H +IK N+L+ + I+DFG + V A SR + Y PE+IE R
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTELCGTLDYLPPEMIEGRM 182
Query: 515 HSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQ 574
H K D++S GVL E L GK P ++ T + + + R E+T F E R
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR-- 234
Query: 575 NIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSENRPSSEENKSKDSN 631
+++ L + P RP + EV +E + + ++PS+ +NK S
Sbjct: 235 ----DLISRL------LKHNPSQRPMLREV---LEHPWITANSSKPSNCQNKESASK 278
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 125/297 (42%), Gaps = 45/297 (15%)
Query: 346 LGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXR-----DFEQQMEIVGRVGQHPNVVPLR 400
LGKG +G Y A ++S + +++EI + +HPN++ L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLY 79
Query: 401 AYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGG 460
Y++ L+ +Y G++ L + D + + A +++ HS
Sbjct: 80 GYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCHS--- 131
Query: 461 PKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR------SAGYRAPEVIETRK 514
+ H +IK N+L+ + I+DFG + V A SR + Y PE+IE R
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTDLCGTLDYLPPEMIEGRM 187
Query: 515 HSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQ 574
H K D++S GVL E L GK P ++ T + + + R E+T F E R
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR-- 239
Query: 575 NIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSENRPSSEENKSKDSN 631
+++ L + P RP + EV +E + + ++PS+ +NK S
Sbjct: 240 ----DLISRL------LKHNPSQRPMLREV---LEHPWITANSSKPSNCQNKESASK 283
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 112/276 (40%), Gaps = 33/276 (11%)
Query: 346 LGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAYYYS 405
+G G +G + DF ++ E++ ++ HP +V L
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLS-HPKLVQLYGVCLE 74
Query: 406 KDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTH 465
+ LV ++ G LS L RG ET + + L G+A++ H
Sbjct: 75 QAPICLVTEFMEHGCLSDYLRTQRGLFAA----ETLLGMCLDVCEGMAYLEE---ACVIH 127
Query: 466 GNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRS-----AGYRAPEVIETRKHSHKSD 520
++ A N L+ ++ +SDFG+T + S + + +PEV ++S KSD
Sbjct: 128 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 187
Query: 521 VYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVEL-MRFQNIEE 578
V+SFGVL+ E+ + GK P ++ + ++V+ D+ R
Sbjct: 188 VWSFGVLMWEVFSEGKIPYENRSNSEVVE------------------DISTGFRLYKPRL 229
Query: 579 EMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQS 614
+ QI C + P+ RP ++R + E+ +S
Sbjct: 230 ASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 265
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 125/297 (42%), Gaps = 45/297 (15%)
Query: 346 LGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXR-----DFEQQMEIVGRVGQHPNVVPLR 400
LGKG +G Y A ++S + +++EI + +HPN++ L
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLY 76
Query: 401 AYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGG 460
Y++ L+ +Y G++ L + D + + A +++ HS
Sbjct: 77 GYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCHS--- 128
Query: 461 PKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR------SAGYRAPEVIETRK 514
+ H +IK N+L+ + I+DFG + V A SR + Y PE+IE R
Sbjct: 129 KRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRXXLCGTLDYLPPEMIEGRM 184
Query: 515 HSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQ 574
H K D++S GVL E L GK P ++ T + + + R E+T F E R
Sbjct: 185 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR-- 236
Query: 575 NIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSENRPSSEENKSKDSN 631
+++ L + P RP + EV +E + + ++PS+ +NK S
Sbjct: 237 ----DLISRL------LKHNPSQRPMLREV---LEHPWITANSSKPSNCQNKESASK 280
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 92/211 (43%), Gaps = 24/211 (11%)
Query: 346 LGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXR-----DFEQQMEIVGRVGQHPNVVPLR 400
LGKG +G Y A ++S + +++EI + +HPN++ L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLY 74
Query: 401 AYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGG 460
Y++ L+ +Y G++ L + D + + A +++ HS
Sbjct: 75 GYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCHS--- 126
Query: 461 PKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG------YRAPEVIETRK 514
+ H +IK N+L+ + I+DFG + V A SR A Y PE+IE R
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRAALCGTLDYLPPEMIEGRM 182
Query: 515 HSHKSDVYSFGVLLLEMLTGKAPLQSPTRDD 545
H K D++S GVL E L GK P ++ T +
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 213
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 96/207 (46%), Gaps = 16/207 (7%)
Query: 344 EVLGKGSYGTAYKAV-LEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAY 402
E +G+G+ GT Y A+ + ++ +V R ++PN+V
Sbjct: 27 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 86
Query: 403 YYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPK 462
Y DE +V +Y A GSL+ ++ T +D + + + +HS +
Sbjct: 87 YLVGDELWVVMEYLAGGSLTDVV------TETCMDEGQIAAVCRECLQALEFLHS---NQ 137
Query: 463 FTHGNIKASNVLINQDLDGCISDFG----LTPLMNVPATPSRSAGYRAPEVIETRKHSHK 518
H NIK+ N+L+ D ++DFG +TP + +T + + APEV+ + + K
Sbjct: 138 VIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPK 197
Query: 519 SDVYSFGVLLLEMLTGKAPL--QSPTR 543
D++S G++ +EM+ G+ P ++P R
Sbjct: 198 VDIWSLGIMAIEMIEGEPPYLNENPLR 224
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 124/297 (41%), Gaps = 45/297 (15%)
Query: 346 LGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXR-----DFEQQMEIVGRVGQHPNVVPLR 400
LGKG +G Y A ++S + +++EI + +HPN++ L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLY 79
Query: 401 AYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGG 460
Y++ L+ +Y G++ L + D + + A +++ HS
Sbjct: 80 GYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCHSK-- 132
Query: 461 PKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR------SAGYRAPEVIETRK 514
+ H +IK N+L+ + I+DFG + V A SR + Y PE IE R
Sbjct: 133 -RVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTTLCGTLDYLPPEXIEGRX 187
Query: 515 HSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQ 574
H K D++S GVL E L GK P ++ T + + + R E+T F E R
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR-- 239
Query: 575 NIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSENRPSSEENKSKDSN 631
+++ L + P RP + EV +E + + ++PS+ +NK S
Sbjct: 240 ----DLISRL------LKHNPSQRPXLREV---LEHPWITANSSKPSNCQNKESASK 283
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 124/297 (41%), Gaps = 45/297 (15%)
Query: 346 LGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXR-----DFEQQMEIVGRVGQHPNVVPLR 400
LGKG +G Y A ++S + +++EI + +HPN++ L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLY 79
Query: 401 AYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGG 460
Y++ L+ +Y G + L + D + + A +++ HS
Sbjct: 80 GYFHDATRVYLILEYAPRGEVYKELQK-----LSKFDEQRTATYITELANALSYCHS--- 131
Query: 461 PKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR------SAGYRAPEVIETRK 514
+ H +IK N+L+ + I+DFG + V A SR + Y PE+IE R
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTTLCGTLDYLPPEMIEGRM 187
Query: 515 HSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQ 574
H K D++S GVL E L GK P ++ T + + + R E+T F E R
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR-- 239
Query: 575 NIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSENRPSSEENKSKDSN 631
+++ L + P RP + EV +E + + ++PS+ +NK S
Sbjct: 240 ----DLISRL------LKHNPSQRPMLREV---LEHPWITANSSKPSNCQNKESASK 283
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 125/297 (42%), Gaps = 45/297 (15%)
Query: 346 LGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXR-----DFEQQMEIVGRVGQHPNVVPLR 400
LGKG +G Y A ++S + +++EI + +HPN++ L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLY 77
Query: 401 AYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGG 460
Y++ L+ +Y G++ L + D + + A +++ HS
Sbjct: 78 GYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCHS--- 129
Query: 461 PKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR------SAGYRAPEVIETRK 514
+ H +IK N+L+ + I+DFG + V A SR + Y PE+IE R
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTTLCGTLDYLPPEMIEGRM 185
Query: 515 HSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQ 574
H K D++S GVL E L GK P ++ T + + + R E+T F E R
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR-- 237
Query: 575 NIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSENRPSSEENKSKDSN 631
+++ L + P RP + EV +E + + ++PS+ +NK S
Sbjct: 238 ----DLISRL------LKHNPSQRPMLREV---LEHPWITANSSKPSNCQNKESASK 281
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 124/297 (41%), Gaps = 45/297 (15%)
Query: 346 LGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXR-----DFEQQMEIVGRVGQHPNVVPLR 400
LGKG +G Y A ++S + +++EI + +HPN++ L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLY 79
Query: 401 AYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGG 460
Y++ L+ +Y G + L + D + + A +++ HS
Sbjct: 80 GYFHDATRVYLILEYAPRGEVYKELQK-----LSKFDEQRTATYITELANALSYCHS--- 131
Query: 461 PKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR------SAGYRAPEVIETRK 514
+ H +IK N+L+ + I+DFG + V A SR + Y PE+IE R
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRXXLXGTLDYLPPEMIEGRM 187
Query: 515 HSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQ 574
H K D++S GVL E L GK P ++ T + + + R E+T F E R
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR-- 239
Query: 575 NIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSENRPSSEENKSKDSN 631
+++ L + P RP + EV +E + + ++PS+ +NK S
Sbjct: 240 ----DLISRL------LKHNPSQRPMLREV---LEHPWITANSSKPSNCQNKESASK 283
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 97/211 (45%), Gaps = 23/211 (10%)
Query: 346 LGKGSYGTAYKAV---LEEST---TXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPL 399
LGKG++G+ L+++T RDFE+++EI+ + QH N+V
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHDNIVKY 75
Query: 400 RAYYYSKDEK--LLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHS 457
+ YS + L+ +Y GSL L ++ +D +K+L T++ +
Sbjct: 76 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK----ERID---HIKLLQYTSQICKGMEY 128
Query: 458 MGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM-------NVPATPSRSAGYRAPEVI 510
+G ++ H ++ N+L+ + I DFGLT ++ V + APE +
Sbjct: 129 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 188
Query: 511 ETRKHSHKSDVYSFGVLLLEMLTGKAPLQSP 541
K S SDV+SFGV+L E+ T +SP
Sbjct: 189 TESKFSVASDVWSFGVVLYELFTYIEKSKSP 219
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 125/297 (42%), Gaps = 45/297 (15%)
Query: 346 LGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXR-----DFEQQMEIVGRVGQHPNVVPLR 400
LGKG +G Y A ++S + +++EI + +HPN++ L
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLY 75
Query: 401 AYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGG 460
Y++ L+ +Y G++ L + D + + A +++ HS
Sbjct: 76 GYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCHS--- 127
Query: 461 PKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR------SAGYRAPEVIETRK 514
+ H +IK N+L+ + I+DFG + V A SR + Y PE+IE R
Sbjct: 128 KRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRDTLCGTLDYLPPEMIEGRM 183
Query: 515 HSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQ 574
H K D++S GVL E L GK P ++ T + + + R E+T F E R
Sbjct: 184 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR-- 235
Query: 575 NIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSENRPSSEENKSKDSN 631
+++ L + P RP + EV +E + + ++PS+ +NK S
Sbjct: 236 ----DLISRL------LKHNPSQRPMLREV---LEHPWITANSSKPSNCQNKESASK 279
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 125/297 (42%), Gaps = 45/297 (15%)
Query: 346 LGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXR-----DFEQQMEIVGRVGQHPNVVPLR 400
LGKG +G Y A ++S + +++EI + +HPN++ L
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLY 75
Query: 401 AYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGG 460
Y++ L+ +Y G++ L + D + + A +++ HS
Sbjct: 76 GYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCHS--- 127
Query: 461 PKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR------SAGYRAPEVIETRK 514
+ H +IK N+L+ + I+DFG + V A SR + Y PE+IE R
Sbjct: 128 KRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTDLCGTLDYLPPEMIEGRM 183
Query: 515 HSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQ 574
H K D++S GVL E L GK P ++ T + + + R E+T F E R
Sbjct: 184 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR-- 235
Query: 575 NIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSENRPSSEENKSKDSN 631
+++ L + P RP + EV +E + + ++PS+ +NK S
Sbjct: 236 ----DLISRL------LKHNPSQRPMLREV---LEHPWITANSSKPSNCQNKESASK 279
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 125/297 (42%), Gaps = 45/297 (15%)
Query: 346 LGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXR-----DFEQQMEIVGRVGQHPNVVPLR 400
LGKG +G Y A ++S + +++EI + +HPN++ L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLY 79
Query: 401 AYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGG 460
Y++ L+ +Y G++ L + D + + A +++ HS
Sbjct: 80 GYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCHS--- 131
Query: 461 PKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR------SAGYRAPEVIETRK 514
+ H +IK N+L+ + I+DFG + V A SR + Y PE+IE R
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTTLCGTLDYLPPEMIEGRM 187
Query: 515 HSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQ 574
H K D++S GVL E L GK P ++ T + + + R E+T F E R
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR-- 239
Query: 575 NIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSENRPSSEENKSKDSN 631
+++ L + P RP + EV +E + + ++PS+ +NK S
Sbjct: 240 ----DLISRL------LKHNPSQRPMLREV---LEHPWITANSSKPSNCQNKESASK 283
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 97/211 (45%), Gaps = 23/211 (10%)
Query: 346 LGKGSYGTAYKAV---LEEST---TXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPL 399
LGKG++G+ L+++T RDFE+++EI+ + QH N+V
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHDNIVKY 81
Query: 400 RAYYYSKDEK--LLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHS 457
+ YS + L+ +Y GSL L ++ +D +K+L T++ +
Sbjct: 82 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK----ERID---HIKLLQYTSQICKGMEY 134
Query: 458 MGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM-------NVPATPSRSAGYRAPEVI 510
+G ++ H ++ N+L+ + I DFGLT ++ V + APE +
Sbjct: 135 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 194
Query: 511 ETRKHSHKSDVYSFGVLLLEMLTGKAPLQSP 541
K S SDV+SFGV+L E+ T +SP
Sbjct: 195 TESKFSVASDVWSFGVVLYELFTYIEKSKSP 225
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 97/211 (45%), Gaps = 23/211 (10%)
Query: 346 LGKGSYGTAYKAV---LEEST---TXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPL 399
LGKG++G+ L+++T RDFE+++EI+ + QH N+V
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHDNIVKY 82
Query: 400 RAYYYSKDEK--LLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHS 457
+ YS + L+ +Y GSL L ++ +D +K+L T++ +
Sbjct: 83 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK----ERID---HIKLLQYTSQICKGMEY 135
Query: 458 MGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM-------NVPATPSRSAGYRAPEVI 510
+G ++ H ++ N+L+ + I DFGLT ++ V + APE +
Sbjct: 136 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 195
Query: 511 ETRKHSHKSDVYSFGVLLLEMLTGKAPLQSP 541
K S SDV+SFGV+L E+ T +SP
Sbjct: 196 TESKFSVASDVWSFGVVLYELFTYIEKSKSP 226
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 97/211 (45%), Gaps = 23/211 (10%)
Query: 346 LGKGSYGTAYKAV---LEEST---TXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPL 399
LGKG++G+ L+++T RDFE+++EI+ + QH N+V
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHDNIVKY 79
Query: 400 RAYYYSKDEK--LLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHS 457
+ YS + L+ +Y GSL L ++ +D +K+L T++ +
Sbjct: 80 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK----ERID---HIKLLQYTSQICKGMEY 132
Query: 458 MGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM-------NVPATPSRSAGYRAPEVI 510
+G ++ H ++ N+L+ + I DFGLT ++ V + APE +
Sbjct: 133 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 192
Query: 511 ETRKHSHKSDVYSFGVLLLEMLTGKAPLQSP 541
K S SDV+SFGV+L E+ T +SP
Sbjct: 193 TESKFSVASDVWSFGVVLYELFTYIEKSKSP 223
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 97/211 (45%), Gaps = 23/211 (10%)
Query: 346 LGKGSYGTAYKAV---LEEST---TXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPL 399
LGKG++G+ L+++T RDFE+++EI+ + QH N+V
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHDNIVKY 76
Query: 400 RAYYYSKDEK--LLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHS 457
+ YS + L+ +Y GSL L ++ +D +K+L T++ +
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK----ERID---HIKLLQYTSQICKGMEY 129
Query: 458 MGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM-------NVPATPSRSAGYRAPEVI 510
+G ++ H ++ N+L+ + I DFGLT ++ V + APE +
Sbjct: 130 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 189
Query: 511 ETRKHSHKSDVYSFGVLLLEMLTGKAPLQSP 541
K S SDV+SFGV+L E+ T +SP
Sbjct: 190 TESKFSVASDVWSFGVVLYELFTYIEKSKSP 220
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 97/211 (45%), Gaps = 23/211 (10%)
Query: 346 LGKGSYGTAYKAV---LEEST---TXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPL 399
LGKG++G+ L+++T RDFE+++EI+ + QH N+V
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHDNIVKY 74
Query: 400 RAYYYSKDEK--LLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHS 457
+ YS + L+ +Y GSL L ++ +D +K+L T++ +
Sbjct: 75 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK----ERID---HIKLLQYTSQICKGMEY 127
Query: 458 MGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM-------NVPATPSRSAGYRAPEVI 510
+G ++ H ++ N+L+ + I DFGLT ++ V + APE +
Sbjct: 128 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 187
Query: 511 ETRKHSHKSDVYSFGVLLLEMLTGKAPLQSP 541
K S SDV+SFGV+L E+ T +SP
Sbjct: 188 TESKFSVASDVWSFGVVLYELFTYIEKSKSP 218
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 97/211 (45%), Gaps = 23/211 (10%)
Query: 346 LGKGSYGTAYKAV---LEEST---TXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPL 399
LGKG++G+ L+++T RDFE+++EI+ + QH N+V
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHDNIVKY 76
Query: 400 RAYYYSKDEK--LLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHS 457
+ YS + L+ +Y GSL L ++ +D +K+L T++ +
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK----ERID---HIKLLQYTSQICKGMEY 129
Query: 458 MGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM-------NVPATPSRSAGYRAPEVI 510
+G ++ H ++ N+L+ + I DFGLT ++ V + APE +
Sbjct: 130 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESL 189
Query: 511 ETRKHSHKSDVYSFGVLLLEMLTGKAPLQSP 541
K S SDV+SFGV+L E+ T +SP
Sbjct: 190 TESKFSVASDVWSFGVVLYELFTYIEKSKSP 220
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 97/211 (45%), Gaps = 23/211 (10%)
Query: 346 LGKGSYGTAYKAV---LEEST---TXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPL 399
LGKG++G+ L+++T RDFE+++EI+ + QH N+V
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHDNIVKY 80
Query: 400 RAYYYSKDEK--LLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHS 457
+ YS + L+ +Y GSL L ++ +D +K+L T++ +
Sbjct: 81 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK----ERID---HIKLLQYTSQICKGMEY 133
Query: 458 MGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM-------NVPATPSRSAGYRAPEVI 510
+G ++ H ++ N+L+ + I DFGLT ++ V + APE +
Sbjct: 134 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 193
Query: 511 ETRKHSHKSDVYSFGVLLLEMLTGKAPLQSP 541
K S SDV+SFGV+L E+ T +SP
Sbjct: 194 TESKFSVASDVWSFGVVLYELFTYIEKSKSP 224
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 97/211 (45%), Gaps = 23/211 (10%)
Query: 346 LGKGSYGTAYKAV---LEEST---TXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPL 399
LGKG++G+ L+++T RDFE+++EI+ + QH N+V
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHDNIVKY 107
Query: 400 RAYYYSKDEK--LLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHS 457
+ YS + L+ +Y GSL L ++ +D +K+L T++ +
Sbjct: 108 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK----ERID---HIKLLQYTSQICKGMEY 160
Query: 458 MGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM-------NVPATPSRSAGYRAPEVI 510
+G ++ H ++ N+L+ + I DFGLT ++ V + APE +
Sbjct: 161 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 220
Query: 511 ETRKHSHKSDVYSFGVLLLEMLTGKAPLQSP 541
K S SDV+SFGV+L E+ T +SP
Sbjct: 221 TESKFSVASDVWSFGVVLYELFTYIEKSKSP 251
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 97/211 (45%), Gaps = 23/211 (10%)
Query: 346 LGKGSYGTAYKAV---LEEST---TXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPL 399
LGKG++G+ L+++T RDFE+++EI+ + QH N+V
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHDNIVKY 76
Query: 400 RAYYYSKDEK--LLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHS 457
+ YS + L+ +Y GSL L ++ +D +K+L T++ +
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK----ERID---HIKLLQYTSQICKGMEY 129
Query: 458 MGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM-------NVPATPSRSAGYRAPEVI 510
+G ++ H ++ N+L+ + I DFGLT ++ V + APE +
Sbjct: 130 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 189
Query: 511 ETRKHSHKSDVYSFGVLLLEMLTGKAPLQSP 541
K S SDV+SFGV+L E+ T +SP
Sbjct: 190 TESKFSVASDVWSFGVVLYELFTYIEKSKSP 220
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 86/177 (48%), Gaps = 21/177 (11%)
Query: 379 DFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAG------ 432
D +ME++ +G+H N++ L ++ +Y + G+L L R G
Sbjct: 86 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYD 145
Query: 433 --RTP---LDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFG 487
R P + ++ V ARG+ ++ S K H ++ A NVL+ ++ I+DFG
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFG 202
Query: 488 LT-PLMNVPATPSRSAG-----YRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAP 537
L + N+ + G + APE + R ++H+SDV+SFGVL+ E+ T G +P
Sbjct: 203 LARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 97/211 (45%), Gaps = 23/211 (10%)
Query: 346 LGKGSYGTAYKAV---LEEST---TXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPL 399
LGKG++G+ L+++T RDFE+++EI+ + QH N+V
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHDNIVKY 83
Query: 400 RAYYYSKDEK--LLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHS 457
+ YS + L+ +Y GSL L ++ +D +K+L T++ +
Sbjct: 84 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK----ERID---HIKLLQYTSQICKGMEY 136
Query: 458 MGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM-------NVPATPSRSAGYRAPEVI 510
+G ++ H ++ N+L+ + I DFGLT ++ V + APE +
Sbjct: 137 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 196
Query: 511 ETRKHSHKSDVYSFGVLLLEMLTGKAPLQSP 541
K S SDV+SFGV+L E+ T +SP
Sbjct: 197 TESKFSVASDVWSFGVVLYELFTYIEKSKSP 227
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 97/211 (45%), Gaps = 23/211 (10%)
Query: 346 LGKGSYGTAYKAV---LEEST---TXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPL 399
LGKG++G+ L+++T RDFE+++EI+ + QH N+V
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHDNIVKY 94
Query: 400 RAYYYSKDEK--LLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHS 457
+ YS + L+ +Y GSL L ++ +D +K+L T++ +
Sbjct: 95 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK----ERID---HIKLLQYTSQICKGMEY 147
Query: 458 MGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM-------NVPATPSRSAGYRAPEVI 510
+G ++ H ++ N+L+ + I DFGLT ++ V + APE +
Sbjct: 148 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 207
Query: 511 ETRKHSHKSDVYSFGVLLLEMLTGKAPLQSP 541
K S SDV+SFGV+L E+ T +SP
Sbjct: 208 TESKFSVASDVWSFGVVLYELFTYIEKSKSP 238
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 97/236 (41%), Gaps = 33/236 (13%)
Query: 313 SGVQEPEKNKLVFFEGCSYNFDLEDLLRASAEVLGKGSYGTAYKAVLEESTTXXXXXXXX 372
S VQ+ +N + F +G D+ G GSY + + T
Sbjct: 8 SIVQQLHRNSIQFTDGYEVKEDI-----------GVGSYSVCKRCI--HKATNXEFAVKI 54
Query: 373 XXXXXRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSL-STLLHGNRGA 431
RD +++EI+ R GQHPN++ L+ Y +V + G L +L +
Sbjct: 55 IDKSKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFS 114
Query: 432 GRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGC-----ISDF 486
R +L + V ++H+ G H ++K SN+L D G I DF
Sbjct: 115 EREA------SAVLFTITKTVEYLHAQG---VVHRDLKPSNILY-VDESGNPESIRICDF 164
Query: 487 GLTPLMNVP----ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPL 538
G + TP +A + APEV+E + + D++S GVLL LTG P
Sbjct: 165 GFAKQLRAENGLLXTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPF 220
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 129/296 (43%), Gaps = 36/296 (12%)
Query: 332 NFDLEDLLRASAEV---LGKGSYGTAYKAVLEE-STTXXXXXXXXXXXXXRDFEQQMEIV 387
N+D ++ R + LG G YG Y+ V ++ S T +F ++ ++
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 65
Query: 388 GRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLG 447
+ +HPN+V L + ++ ++ G+L L R R E +LL
Sbjct: 66 KEI-KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQ----EVNAVVLLY 117
Query: 448 TARGVAH-IHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN-----VPATPSRS 501
A ++ + + F H ++ A N L+ ++ ++DFGL+ LM PA
Sbjct: 118 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFP 177
Query: 502 AGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREE 560
+ APE + K S KSDV++FGVLL E+ T G +P +DL + + + +
Sbjct: 178 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG------IDLSQVYELLEK-- 229
Query: 561 WTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDS 616
D + R + E++ ++++ AC P RP+ E+ + E + Q S
Sbjct: 230 ------DYRMERPEGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFETMFQESS 276
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 86/177 (48%), Gaps = 21/177 (11%)
Query: 379 DFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAG------ 432
D +ME++ +G+H N++ L ++ +Y + G+L L R G
Sbjct: 86 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 145
Query: 433 --RTP---LDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFG 487
R P + ++ V ARG+ ++ S K H ++ A NVL+ ++ I+DFG
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFG 202
Query: 488 LT-PLMNVPATPSRSAG-----YRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAP 537
L + N+ + G + APE + R ++H+SDV+SFGVL+ E+ T G +P
Sbjct: 203 LARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 124/292 (42%), Gaps = 45/292 (15%)
Query: 346 LGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXR-----DFEQQMEIVGRVGQHPNVVPLR 400
LGKG +G Y A ++S + +++EI + +HPN++ L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLY 74
Query: 401 AYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGG 460
Y++ L+ +Y G++ L + D + + A +++ HS
Sbjct: 75 GYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCHS--- 126
Query: 461 PKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR------SAGYRAPEVIETRK 514
+ H +IK N+L+ + I+DFG + V A SR + Y PE+IE R
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTDLCGTLDYLPPEMIEGRM 182
Query: 515 HSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQ 574
H K D++S GVL E L GK P ++ T + + + R E+T F E R
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR-- 234
Query: 575 NIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSENRPSSEENK 626
+++ L + P RP + EV +E + + ++PS+ +NK
Sbjct: 235 ----DLISRL------LKHNPSQRPMLREV---LEHPWITANSSKPSNCQNK 273
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 97/211 (45%), Gaps = 23/211 (10%)
Query: 346 LGKGSYGTAYKAV---LEEST---TXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPL 399
LGKG++G+ L+++T RDFE+++EI+ + QH N+V
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHDNIVKY 94
Query: 400 RAYYYSKDEK--LLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHS 457
+ YS + L+ +Y GSL L ++ +D +K+L T++ +
Sbjct: 95 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK----ERID---HIKLLQYTSQICKGMEY 147
Query: 458 MGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM-------NVPATPSRSAGYRAPEVI 510
+G ++ H ++ N+L+ + I DFGLT ++ V + APE +
Sbjct: 148 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 207
Query: 511 ETRKHSHKSDVYSFGVLLLEMLTGKAPLQSP 541
K S SDV+SFGV+L E+ T +SP
Sbjct: 208 TESKFSVASDVWSFGVVLYELFTYIEKSKSP 238
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 100/213 (46%), Gaps = 17/213 (7%)
Query: 334 DLEDLLRASAEV---LGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRV 390
D+ ++ R S ++ LG G +G + +T F ++ +I+ ++
Sbjct: 2 DVWEIPRESLQLIKRLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKL 61
Query: 391 GQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTAR 450
+H +V L A S++ +V +Y GSL L G GR L V + A
Sbjct: 62 -KHDKLVQLYAVV-SEEPIYIVTEYMNKGSLLDFLKD--GEGRA-LKLPNLVDMAAQVAA 116
Query: 451 GVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG-----YR 505
G+A+I M + H +++++N+L+ L I+DFGL L+ +R +
Sbjct: 117 GMAYIERMN---YIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWT 173
Query: 506 APEVIETRKHSHKSDVYSFGVLLLEMLT-GKAP 537
APE + + KSDV+SFG+LL E++T G+ P
Sbjct: 174 APEAALYGRFTIKSDVWSFGILLTELVTKGRVP 206
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 124/292 (42%), Gaps = 45/292 (15%)
Query: 346 LGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXR-----DFEQQMEIVGRVGQHPNVVPLR 400
LGKG +G Y A ++S + +++EI + +HPN++ L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLY 74
Query: 401 AYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGG 460
Y++ L+ +Y G++ L + D + + A +++ HS
Sbjct: 75 GYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCHS--- 126
Query: 461 PKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR------SAGYRAPEVIETRK 514
+ H +IK N+L+ + I+DFG + V A SR + Y PE+IE R
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTDLCGTLDYLPPEMIEGRM 182
Query: 515 HSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQ 574
H K D++S GVL E L GK P ++ T + + + R E+T F E R
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR-- 234
Query: 575 NIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSENRPSSEENK 626
+++ L + P RP + EV +E + + ++PS+ +NK
Sbjct: 235 ----DLISRL------LKHNPSQRPMLREV---LEHPWITANSSKPSNCQNK 273
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 108/235 (45%), Gaps = 30/235 (12%)
Query: 343 AEVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAY 402
+V+G GS+G Y+A L +S ++ E Q + R H N+V LR +
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQ---IMRKLDHCNIVRLRYF 81
Query: 403 YYSKDEKL------LVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTA-RGVAHI 455
+YS EK LV DY + H +R P+ + VK+ + R +A+I
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIY---VKLYMYQLFRSLAYI 138
Query: 456 HSMGGPKFTHGNIKASNVLINQD---LDGCISDFGLTPLM-----NVPATPSRSAGYRAP 507
HS G H +IK N+L++ D L C DFG + NV SR YRAP
Sbjct: 139 HSFG---ICHRDIKPQNLLLDPDTAVLKLC--DFGSAKQLVRGEPNVSXICSRY--YRAP 191
Query: 508 EVI-ETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPT-RDDMVDLPRWVQSVVREE 560
E+I ++ DV+S G +L E+L G+ + D +V++ + + + RE+
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 246
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 135/304 (44%), Gaps = 37/304 (12%)
Query: 324 VFFEGCSYNFDLEDLLRASAEV---LGKGSYGTAYKAVLEE-STTXXXXXXXXXXXXXRD 379
++F+G S N+D ++ R + LG G YG Y+ V ++ S T +
Sbjct: 10 LYFQG-SPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE 68
Query: 380 FEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWE 439
F ++ ++ + +HPN+V L + ++ ++ G+L L R R E
Sbjct: 69 FLKEAAVMKEI-KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQ----E 120
Query: 440 TRVKILLGTARGVAH-IHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATP 498
+LL A ++ + + F H ++ A N L+ ++ ++DFGL+ LM
Sbjct: 121 VNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 180
Query: 499 SRSAG-----YRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRW 552
+ + + APE + K S KSDV++FGVLL E+ T G +P +DL +
Sbjct: 181 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG------IDLSQV 234
Query: 553 VQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVR 612
+ + + D + R + E++ ++++ AC P RP+ E+ + E +
Sbjct: 235 YELLEK--------DYRMERPEGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFETMF 283
Query: 613 QSDS 616
Q S
Sbjct: 284 QESS 287
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 83/172 (48%), Gaps = 20/172 (11%)
Query: 379 DFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAG------ 432
D +ME++ +G+H N++ L ++ +Y + G+L L R G
Sbjct: 86 DLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 145
Query: 433 --RTP---LDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFG 487
R P + ++ V ARG+ ++ S K H ++ A NVL+ ++ I+DFG
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFG 202
Query: 488 LT-PLMNVPATPSRSAG-----YRAPEVIETRKHSHKSDVYSFGVLLLEMLT 533
L + N+ + G + APE + R ++H+SDV+SFGVL+ E+ T
Sbjct: 203 LARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 86/177 (48%), Gaps = 21/177 (11%)
Query: 379 DFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAG------ 432
D +ME++ +G+H N++ L ++ +Y + G+L L R G
Sbjct: 75 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 134
Query: 433 --RTP---LDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFG 487
R P + ++ V ARG+ ++ S K H ++ A NVL+ ++ I+DFG
Sbjct: 135 INRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFG 191
Query: 488 LT-PLMNVPATPSRSAG-----YRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAP 537
L + N+ + G + APE + R ++H+SDV+SFGVL+ E+ T G +P
Sbjct: 192 LARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 248
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 93/217 (42%), Gaps = 34/217 (15%)
Query: 344 EVLGKGSYGTAYKAV-LEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAY 402
E++G G+YG YK ++ + +Q++ ++ + H N+
Sbjct: 30 ELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGA 89
Query: 403 YYSK------DEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIH 456
+ K D+ LV ++ +GS++ L+ +G L E I RG++H+H
Sbjct: 90 FIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKG---NTLKEEWIAYICREILRGLSHLH 146
Query: 457 SMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAGYR----------A 506
K H +IK NVL+ ++ + + DFG V A R+ G R A
Sbjct: 147 QH---KVIHRDIKGQNVLLTENAEVKLVDFG------VSAQLDRTVGRRNTFIGTPYWMA 197
Query: 507 PEVIETRK-----HSHKSDVYSFGVLLLEMLTGKAPL 538
PEVI + + KSD++S G+ +EM G PL
Sbjct: 198 PEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPL 234
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 87/177 (49%), Gaps = 21/177 (11%)
Query: 379 DFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAG------ 432
D +ME++ +G+H N++ L ++ +Y + G+L L R G
Sbjct: 86 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 145
Query: 433 --RTP---LDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFG 487
R P + ++ V ARG+ ++ S K H ++ A NVL+ ++ I+DFG
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFG 202
Query: 488 LT-PLMNVPATPSRSAG-----YRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAP 537
L + N+ + + G + APE + R ++H+SDV+SFGVL+ E+ T G +P
Sbjct: 203 LARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 107/235 (45%), Gaps = 30/235 (12%)
Query: 343 AEVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAY 402
+V+G GS+G Y+A L +S ++ E Q + R H N+V LR +
Sbjct: 26 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ---IMRKLDHCNIVRLRYF 82
Query: 403 YYSKDEKL------LVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTA-RGVAHI 455
+YS EK LV DY H +R P+ + VK+ + R +A+I
Sbjct: 83 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMYQLFRSLAYI 139
Query: 456 HSMGGPKFTHGNIKASNVLINQD---LDGCISDFGLTPLM-----NVPATPSRSAGYRAP 507
HS G H +IK N+L++ D L C DFG + NV SR YRAP
Sbjct: 140 HSFG---ICHRDIKPQNLLLDPDTAVLKLC--DFGSAKQLVRGEPNVSXICSRY--YRAP 192
Query: 508 EVI-ETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPT-RDDMVDLPRWVQSVVREE 560
E+I ++ DV+S G +L E+L G+ + D +V++ + + + RE+
Sbjct: 193 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 247
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 86/177 (48%), Gaps = 21/177 (11%)
Query: 379 DFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAG------ 432
D +ME++ +G+H N++ L ++ +Y + G+L L R G
Sbjct: 73 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 132
Query: 433 --RTP---LDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFG 487
R P + ++ V ARG+ ++ S K H ++ A NVL+ ++ I+DFG
Sbjct: 133 INRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLTARNVLVTENNVMKIADFG 189
Query: 488 LT-PLMNVPATPSRSAG-----YRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAP 537
L + N+ + G + APE + R ++H+SDV+SFGVL+ E+ T G +P
Sbjct: 190 LARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 246
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 107/235 (45%), Gaps = 30/235 (12%)
Query: 343 AEVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAY 402
+V+G GS+G Y+A L +S ++ E Q + R H N+V LR +
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ---IMRKLDHCNIVRLRYF 81
Query: 403 YYSKDEKL------LVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTA-RGVAHI 455
+YS EK LV DY H +R P+ + VK+ + R +A+I
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMYQLFRSLAYI 138
Query: 456 HSMGGPKFTHGNIKASNVLINQD---LDGCISDFGLTPLM-----NVPATPSRSAGYRAP 507
HS G H +IK N+L++ D L C DFG + NV SR YRAP
Sbjct: 139 HSFG---ICHRDIKPQNLLLDPDTAVLKLC--DFGSAKQLVRGEPNVSXICSRY--YRAP 191
Query: 508 EVI-ETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPT-RDDMVDLPRWVQSVVREE 560
E+I ++ DV+S G +L E+L G+ + D +V++ + + + RE+
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 246
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 86/177 (48%), Gaps = 21/177 (11%)
Query: 379 DFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAG------ 432
D +ME++ +G+H N++ L ++ +Y + G+L L R G
Sbjct: 78 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 137
Query: 433 --RTP---LDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFG 487
R P + ++ V ARG+ ++ S K H ++ A NVL+ ++ I+DFG
Sbjct: 138 INRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFG 194
Query: 488 LT-PLMNVPATPSRSAG-----YRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAP 537
L + N+ + G + APE + R ++H+SDV+SFGVL+ E+ T G +P
Sbjct: 195 LARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 251
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 107/235 (45%), Gaps = 30/235 (12%)
Query: 343 AEVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAY 402
+V+G GS+G Y+A L +S ++ E Q + R H N+V LR +
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ---IMRKLDHCNIVRLRYF 81
Query: 403 YYSKDEKL------LVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTA-RGVAHI 455
+YS EK LV DY H +R P+ + VK+ + R +A+I
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMYQLFRSLAYI 138
Query: 456 HSMGGPKFTHGNIKASNVLINQD---LDGCISDFGLTPLM-----NVPATPSRSAGYRAP 507
HS G H +IK N+L++ D L C DFG + NV SR YRAP
Sbjct: 139 HSFG---ICHRDIKPQNLLLDPDTAVLKLC--DFGSAKQLVRGEPNVSXICSRY--YRAP 191
Query: 508 EVI-ETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPT-RDDMVDLPRWVQSVVREE 560
E+I ++ DV+S G +L E+L G+ + D +V++ + + + RE+
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 246
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 107/234 (45%), Gaps = 30/234 (12%)
Query: 344 EVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAYY 403
+V+G GS+G Y+A L +S ++ E Q + R H N+V LR ++
Sbjct: 38 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ---IMRKLDHCNIVRLRYFF 94
Query: 404 YSKDEKL------LVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTA-RGVAHIH 456
YS EK LV DY H +R P+ + VK+ + R +A+IH
Sbjct: 95 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMYQLFRSLAYIH 151
Query: 457 SMGGPKFTHGNIKASNVLINQD---LDGCISDFGLTPLM-----NVPATPSRSAGYRAPE 508
S G H +IK N+L++ D L C DFG + NV SR YRAPE
Sbjct: 152 SFG---ICHRDIKPQNLLLDPDTAVLKLC--DFGSAKQLVRGEPNVSXICSRY--YRAPE 204
Query: 509 VI-ETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPT-RDDMVDLPRWVQSVVREE 560
+I ++ DV+S G +L E+L G+ + D +V++ + + + RE+
Sbjct: 205 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 258
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 107/235 (45%), Gaps = 30/235 (12%)
Query: 343 AEVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAY 402
+V+G GS+G Y+A L +S ++ E Q + R H N+V LR +
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ---IMRKLDHCNIVRLRYF 81
Query: 403 YYSKDEKL------LVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTA-RGVAHI 455
+YS EK LV DY H +R P+ + VK+ + R +A+I
Sbjct: 82 FYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMYQLFRSLAYI 138
Query: 456 HSMGGPKFTHGNIKASNVLINQD---LDGCISDFGLTPLM-----NVPATPSRSAGYRAP 507
HS G H +IK N+L++ D L C DFG + NV SR YRAP
Sbjct: 139 HSFG---ICHRDIKPQNLLLDPDTAVLKLC--DFGSAKQLVRGEPNVSXICSRY--YRAP 191
Query: 508 EVI-ETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPT-RDDMVDLPRWVQSVVREE 560
E+I ++ DV+S G +L E+L G+ + D +V++ + + + RE+
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 246
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 107/235 (45%), Gaps = 30/235 (12%)
Query: 343 AEVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAY 402
+V+G GS+G Y+A L +S ++ E Q + R H N+V LR +
Sbjct: 33 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ---IMRKLDHCNIVRLRYF 89
Query: 403 YYSKDEKL------LVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTA-RGVAHI 455
+YS EK LV DY H +R P+ + VK+ + R +A+I
Sbjct: 90 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMYQLFRSLAYI 146
Query: 456 HSMGGPKFTHGNIKASNVLINQD---LDGCISDFGLTPLM-----NVPATPSRSAGYRAP 507
HS G H +IK N+L++ D L C DFG + NV SR YRAP
Sbjct: 147 HSFG---ICHRDIKPQNLLLDPDTAVLKLC--DFGSAKQLVRGEPNVSXICSRY--YRAP 199
Query: 508 EVI-ETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPT-RDDMVDLPRWVQSVVREE 560
E+I ++ DV+S G +L E+L G+ + D +V++ + + + RE+
Sbjct: 200 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 254
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 86/177 (48%), Gaps = 21/177 (11%)
Query: 379 DFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAG------ 432
D +ME++ +G+H N++ L ++ +Y + G+L L R G
Sbjct: 86 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 145
Query: 433 --RTP---LDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFG 487
R P + ++ V ARG+ ++ S K H ++ A NVL+ ++ I+DFG
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFG 202
Query: 488 LT-PLMNVPATPSRSAG-----YRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAP 537
L + N+ + G + APE + R ++H+SDV+SFGVL+ E+ T G +P
Sbjct: 203 LARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 107/235 (45%), Gaps = 30/235 (12%)
Query: 343 AEVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAY 402
+V+G GS+G Y+A L +S ++ E Q + R H N+V LR +
Sbjct: 37 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ---IMRKLDHCNIVRLRYF 93
Query: 403 YYSKDEKL------LVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTA-RGVAHI 455
+YS EK LV DY H +R P+ + VK+ + R +A+I
Sbjct: 94 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMYQLFRSLAYI 150
Query: 456 HSMGGPKFTHGNIKASNVLINQD---LDGCISDFGLTPLM-----NVPATPSRSAGYRAP 507
HS G H +IK N+L++ D L C DFG + NV SR YRAP
Sbjct: 151 HSFG---ICHRDIKPQNLLLDPDTAVLKLC--DFGSAKQLVRGEPNVSXICSRY--YRAP 203
Query: 508 EVI-ETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPT-RDDMVDLPRWVQSVVREE 560
E+I ++ DV+S G +L E+L G+ + D +V++ + + + RE+
Sbjct: 204 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 258
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 83/172 (48%), Gaps = 20/172 (11%)
Query: 379 DFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAG------ 432
D +ME++ +G+H N++ L ++ +Y + G+L L R G
Sbjct: 132 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 191
Query: 433 --RTP---LDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFG 487
R P + ++ V ARG+ ++ S K H ++ A NVL+ ++ I+DFG
Sbjct: 192 INRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFG 248
Query: 488 LT-PLMNVPATPSRSAG-----YRAPEVIETRKHSHKSDVYSFGVLLLEMLT 533
L + N+ + G + APE + R ++H+SDV+SFGVL+ E+ T
Sbjct: 249 LARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 97/211 (45%), Gaps = 23/211 (10%)
Query: 346 LGKGSYGTAYKAV---LEEST---TXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPL 399
LGKG++G+ L+++T RDFE+++EI+ + QH N+V
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHDNIVKY 79
Query: 400 RAYYYSKDEK--LLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHS 457
+ YS + L+ ++ GSL L ++ +D +K+L T++ +
Sbjct: 80 KGVCYSAGRRNLKLIMEFLPYGSLREYLQKHK----ERID---HIKLLQYTSQICKGMEY 132
Query: 458 MGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM-------NVPATPSRSAGYRAPEVI 510
+G ++ H ++ N+L+ + I DFGLT ++ V + APE +
Sbjct: 133 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 192
Query: 511 ETRKHSHKSDVYSFGVLLLEMLTGKAPLQSP 541
K S SDV+SFGV+L E+ T +SP
Sbjct: 193 TESKFSVASDVWSFGVVLYELFTYIEKSKSP 223
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 107/235 (45%), Gaps = 30/235 (12%)
Query: 343 AEVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAY 402
+V+G GS+G Y+A L +S ++ E Q + R H N+V LR +
Sbjct: 44 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ---IMRKLDHCNIVRLRYF 100
Query: 403 YYSKDEKL------LVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTA-RGVAHI 455
+YS EK LV DY H +R P+ + VK+ + R +A+I
Sbjct: 101 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMYQLFRSLAYI 157
Query: 456 HSMGGPKFTHGNIKASNVLINQD---LDGCISDFGLTPLM-----NVPATPSRSAGYRAP 507
HS G H +IK N+L++ D L C DFG + NV SR YRAP
Sbjct: 158 HSFG---ICHRDIKPQNLLLDPDTAVLKLC--DFGSAKQLVRGEPNVSXICSRY--YRAP 210
Query: 508 EVI-ETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPT-RDDMVDLPRWVQSVVREE 560
E+I ++ DV+S G +L E+L G+ + D +V++ + + + RE+
Sbjct: 211 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 265
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 83/172 (48%), Gaps = 20/172 (11%)
Query: 379 DFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAG------ 432
D +ME++ +G+H N++ L ++ +Y + G+L L R G
Sbjct: 86 DLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 145
Query: 433 --RTP---LDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFG 487
R P + ++ V ARG+ ++ S K H ++ A NVL+ ++ I+DFG
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFG 202
Query: 488 LT-PLMNVPATPSRSAG-----YRAPEVIETRKHSHKSDVYSFGVLLLEMLT 533
L + N+ + G + APE + R ++H+SDV+SFGVL+ E+ T
Sbjct: 203 LARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 107/235 (45%), Gaps = 30/235 (12%)
Query: 343 AEVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAY 402
+V+G GS+G Y+A L +S ++ E Q + R H N+V LR +
Sbjct: 29 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ---IMRKLDHCNIVRLRYF 85
Query: 403 YYSKDEKL------LVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTA-RGVAHI 455
+YS EK LV DY H +R P+ + VK+ + R +A+I
Sbjct: 86 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMYQLFRSLAYI 142
Query: 456 HSMGGPKFTHGNIKASNVLINQD---LDGCISDFGLTPLM-----NVPATPSRSAGYRAP 507
HS G H +IK N+L++ D L C DFG + NV SR YRAP
Sbjct: 143 HSFG---ICHRDIKPQNLLLDPDTAVLKLC--DFGSAKQLVRGEPNVSXICSRY--YRAP 195
Query: 508 EVI-ETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPT-RDDMVDLPRWVQSVVREE 560
E+I ++ DV+S G +L E+L G+ + D +V++ + + + RE+
Sbjct: 196 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 250
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 114/244 (46%), Gaps = 19/244 (7%)
Query: 314 GVQEPEKNKLVFFEGCSYNFDLEDLLRASAEVLGKGSYGTAYKAVLE-ESTTXXXXXXXX 372
G ++ + K + S ++++ D + +G GS+GT YK +
Sbjct: 12 GSEDRNRMKTLGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAP 71
Query: 373 XXXXXRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAG 432
+ F+ ++ ++ R +H N++ L Y +K + +V + SL LH
Sbjct: 72 TPQQLQAFKNEVGVL-RKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLH----II 125
Query: 433 RTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM 492
T + + I TA+G+ ++H+ H ++K++N+ +++DL I DFGL +
Sbjct: 126 ETKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVK 182
Query: 493 NVPATP------SRSAGYRAPEVIETRK---HSHKSDVYSFGVLLLEMLTGKAPLQSPTR 543
+ + S S + APEVI + +S +SDVY+FG++L E++TG+ P +
Sbjct: 183 SRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINN 242
Query: 544 DDMV 547
D +
Sbjct: 243 RDQI 246
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 107/234 (45%), Gaps = 30/234 (12%)
Query: 344 EVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAYY 403
+V+G GS+G Y+A L +S ++ E Q + R H N+V LR ++
Sbjct: 60 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ---IMRKLDHCNIVRLRYFF 116
Query: 404 YSKDEKL------LVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTA-RGVAHIH 456
YS EK LV DY H +R P+ + VK+ + R +A+IH
Sbjct: 117 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMYQLFRSLAYIH 173
Query: 457 SMGGPKFTHGNIKASNVLINQD---LDGCISDFGLTPLM-----NVPATPSRSAGYRAPE 508
S G H +IK N+L++ D L C DFG + NV SR YRAPE
Sbjct: 174 SFG---ICHRDIKPQNLLLDPDTAVLKLC--DFGSAKQLVRGEPNVSXICSRY--YRAPE 226
Query: 509 VI-ETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPT-RDDMVDLPRWVQSVVREE 560
+I ++ DV+S G +L E+L G+ + D +V++ + + + RE+
Sbjct: 227 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 280
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 131/300 (43%), Gaps = 36/300 (12%)
Query: 328 GCSYNFDLEDLLRASAEV---LGKGSYGTAYKAVLEE-STTXXXXXXXXXXXXXRDFEQQ 383
G S N+D ++ R + LG G YG Y+ V ++ S T +F ++
Sbjct: 1 GPSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKE 60
Query: 384 MEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVK 443
++ + +HPN+V L + ++ ++ G+L L R R E
Sbjct: 61 AAVMKEI-KHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL---RECNRQ----EVNAV 112
Query: 444 ILLGTARGVAH-IHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSA 502
+LL A ++ + + F H ++ A N L+ ++ ++DFGL+ LM + +
Sbjct: 113 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAG 172
Query: 503 G-----YRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSV 556
+ APE + K S KSDV++FGVLL E+ T G +P +DL + + +
Sbjct: 173 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG------IDLSQVYELL 226
Query: 557 VREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDS 616
+ D + R + E++ ++++ AC P RP+ E+ + E + Q S
Sbjct: 227 EK--------DYRMERPEGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFETMFQESS 275
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 107/235 (45%), Gaps = 30/235 (12%)
Query: 343 AEVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAY 402
+V+G GS+G Y+A L +S ++ E Q + R H N+V LR +
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ---IMRKLDHCNIVRLRYF 81
Query: 403 YYSKDEKL------LVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTA-RGVAHI 455
+YS EK LV DY H +R P+ + VK+ + R +A+I
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMYQLFRSLAYI 138
Query: 456 HSMGGPKFTHGNIKASNVLINQD---LDGCISDFGLTPLM-----NVPATPSRSAGYRAP 507
HS G H +IK N+L++ D L C DFG + NV SR YRAP
Sbjct: 139 HSFG---ICHRDIKPQNLLLDPDTAVLKLC--DFGSAKQLVRGEPNVSYICSRY--YRAP 191
Query: 508 EVI-ETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPT-RDDMVDLPRWVQSVVREE 560
E+I ++ DV+S G +L E+L G+ + D +V++ + + + RE+
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 246
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 86/177 (48%), Gaps = 21/177 (11%)
Query: 379 DFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAG------ 432
D +ME++ +G+H N++ L ++ +Y + G+L L R G
Sbjct: 86 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 145
Query: 433 --RTP---LDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFG 487
R P + ++ V ARG+ ++ S K H ++ A NVL+ ++ I+DFG
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMRIADFG 202
Query: 488 LT-PLMNVPATPSRSAG-----YRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAP 537
L + N+ + G + APE + R ++H+SDV+SFGVL+ E+ T G +P
Sbjct: 203 LARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 96/207 (46%), Gaps = 16/207 (7%)
Query: 344 EVLGKGSYGTAYKAV-LEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAY 402
E +G+G+ GT Y A+ + ++ +V R ++PN+V
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 403 YYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPK 462
Y DE +V +Y A GSL+ ++ T +D + + + +HS +
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVV------TETCMDEGQIAAVCRECLQALEFLHS---NQ 136
Query: 463 FTHGNIKASNVLINQDLDGCISDFG----LTPLMNVPATPSRSAGYRAPEVIETRKHSHK 518
H +IK+ N+L+ D ++DFG +TP + +T + + APEV+ + + K
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPK 196
Query: 519 SDVYSFGVLLLEMLTGKAPL--QSPTR 543
D++S G++ +EM+ G+ P ++P R
Sbjct: 197 VDIWSLGIMAIEMIEGEPPYLNENPLR 223
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 92/211 (43%), Gaps = 24/211 (11%)
Query: 346 LGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXR-----DFEQQMEIVGRVGQHPNVVPLR 400
LGKG +G Y A ++S + +++EI + +HPN++ L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLY 77
Query: 401 AYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGG 460
Y++ L+ +Y G++ L + D + + A +++ HS
Sbjct: 78 GYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCHS--- 129
Query: 461 PKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR------SAGYRAPEVIETRK 514
+ H +IK N+L+ + I+DFG + V A SR + Y PE+IE R
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRXXLCGTLDYLPPEMIEGRM 185
Query: 515 HSHKSDVYSFGVLLLEMLTGKAPLQSPTRDD 545
H K D++S GVL E L GK P ++ T +
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 216
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 92/211 (43%), Gaps = 24/211 (11%)
Query: 346 LGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXR-----DFEQQMEIVGRVGQHPNVVPLR 400
LGKG +G Y A ++S + +++EI + +HPN++ L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLY 74
Query: 401 AYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGG 460
Y++ L+ +Y G++ L + D + + A +++ HS
Sbjct: 75 GYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCHS--- 126
Query: 461 PKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR------SAGYRAPEVIETRK 514
+ H +IK N+L+ + I+DFG + V A SR + Y PE+IE R
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRXXLCGTLDYLPPEMIEGRM 182
Query: 515 HSHKSDVYSFGVLLLEMLTGKAPLQSPTRDD 545
H K D++S GVL E L GK P ++ T +
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 213
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 97/229 (42%), Gaps = 26/229 (11%)
Query: 328 GCSYNFDLEDLLRASAEVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXR-----DFEQ 382
G + LED LGKG +G Y A ++S + +
Sbjct: 4 GSKRQWALEDF--EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 61
Query: 383 QMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRV 442
++EI + +HPN++ L Y++ L+ +Y G++ L + D +
Sbjct: 62 EVEIQSHL-RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTA 115
Query: 443 KILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR-- 500
+ A +++ HS + H +IK N+L+ + I+DFG + V A SR
Sbjct: 116 TYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRT 168
Query: 501 ----SAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDD 545
+ Y PE+IE R H K D++S GVL E L GK P ++ T +
Sbjct: 169 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 217
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 107/235 (45%), Gaps = 30/235 (12%)
Query: 343 AEVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAY 402
+V+G GS+G Y+A L +S ++ E Q + R H N+V LR +
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQ---IMRKLDHCNIVRLRYF 81
Query: 403 YYSKDEKL------LVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTA-RGVAHI 455
+YS EK LV DY H +R P+ + VK+ + R +A+I
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMYQLFRSLAYI 138
Query: 456 HSMGGPKFTHGNIKASNVLINQD---LDGCISDFGLTPLM-----NVPATPSRSAGYRAP 507
HS G H +IK N+L++ D L C DFG + NV SR YRAP
Sbjct: 139 HSFG---ICHRDIKPQNLLLDPDTAVLKLC--DFGSAKQLVRGEPNVSYICSRY--YRAP 191
Query: 508 EVI-ETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPT-RDDMVDLPRWVQSVVREE 560
E+I ++ DV+S G +L E+L G+ + D +V++ + + + RE+
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 246
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 125/297 (42%), Gaps = 45/297 (15%)
Query: 346 LGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXR-----DFEQQMEIVGRVGQHPNVVPLR 400
LGKG +G Y A ++S + +++EI + +HPN++ L
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLY 76
Query: 401 AYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGG 460
Y++ L+ +Y G++ L + D + + A +++ HS
Sbjct: 77 GYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCHS--- 128
Query: 461 PKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR------SAGYRAPEVIETRK 514
+ H +IK N+L+ + I++FG + V A SR + Y PE+IE R
Sbjct: 129 KRVIHRDIKPENLLLGSAGELKIANFGWS----VHAPSSRRTTLCGTLDYLPPEMIEGRM 184
Query: 515 HSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQ 574
H K D++S GVL E L GK P ++ T + + + R E+T F E R
Sbjct: 185 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR-- 236
Query: 575 NIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSENRPSSEENKSKDSN 631
+++ L + P RP + EV +E + + ++PS+ +NK S
Sbjct: 237 ----DLISRL------LKHNPSQRPMLREV---LEHPWITANSSKPSNCQNKESASK 280
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 83/177 (46%), Gaps = 21/177 (11%)
Query: 379 DFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAG------ 432
D +ME++ +G+H N++ L ++ +Y + G+L L R G
Sbjct: 79 DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFN 138
Query: 433 -----RTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFG 487
L + V ARG+ ++ S K H ++ A NVL+ +D I+DFG
Sbjct: 139 PSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFG 195
Query: 488 LT-PLMNVPATPSRSAG-----YRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAP 537
L + ++ + G + APE + R ++H+SDV+SFGVLL E+ T G +P
Sbjct: 196 LARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 252
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 81/161 (50%), Gaps = 18/161 (11%)
Query: 392 QHPNVVPLRAYYYSKDEKL-LVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTAR 450
+H N+V L + L +V +Y A GSL L R GR+ L + +K L
Sbjct: 63 RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYL---RSRGRSVLGGDCLLKFSLDVCE 119
Query: 451 GVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG-----YR 505
+ ++ G F H ++ A NVL+++D +SDFGLT A+ ++ G +
Sbjct: 120 AMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTK----EASSTQDTGKLPVKWT 172
Query: 506 APEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPL-QSPTRD 544
APE + S KSDV+SFG+LL E+ + G+ P + P +D
Sbjct: 173 APEALREAAFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD 213
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 110/242 (45%), Gaps = 30/242 (12%)
Query: 336 EDLLRASAEVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPN 395
+++ +V+G GS+G Y+A L +S ++ E Q + R H N
Sbjct: 18 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQ---IMRKLDHCN 74
Query: 396 VVPLRAYYYSKDEKL------LVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTA 449
+V LR ++YS EK LV DY H +R P+ + VK+ +
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMYQL 131
Query: 450 -RGVAHIHSMGGPKFTHGNIKASNVLINQD---LDGCISDFGLTPLM-----NVPATPSR 500
R +A+IHS G H +IK N+L++ D L C DFG + NV SR
Sbjct: 132 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLC--DFGSAKQLVRGEPNVSYICSR 186
Query: 501 SAGYRAPEVI-ETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPT-RDDMVDLPRWVQSVVR 558
YRAPE+I ++ DV+S G +L E+L G+ + D +V++ + + + R
Sbjct: 187 Y--YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 244
Query: 559 EE 560
E+
Sbjct: 245 EQ 246
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 118/267 (44%), Gaps = 33/267 (12%)
Query: 346 LGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAYYYS 405
LG G +G + A + T F + ++ + QH +V L A +
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVM-KTLQHDKLVKLHAVV-T 247
Query: 406 KDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTH 465
K+ ++ ++ A GSL L + G+ + PL + A G+A I + H
Sbjct: 248 KEPIYIITEFMAKGSLLDFLKSDEGS-KQPLP--KLIDFSAQIAEGMAFIEQRN---YIH 301
Query: 466 GNIKASNVLINQDLDGCISDFGLTPL-MNVPATPSRSAGYRAPEVIETRKHSHKSDVYSF 524
+++A+N+L++ L I+DFGL + P + APE I + KSDV+SF
Sbjct: 302 RDLRAANILVSASLVCKIADFGLARVGAKFPIK------WTAPEAINFGSFTIKSDVWSF 355
Query: 525 GVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQM 583
G+LL+E++T G+ P + P ++++ R + R +N EE+ +
Sbjct: 356 GILLMEIVTYGRIPYPGMSN------PEVIRALER--------GYRMPRPENCPEELYNI 401
Query: 584 LQIGMACVAKVPDMRPNMDEVVRMIEE 610
+ M C P+ RP + + ++++
Sbjct: 402 M---MRCWKNRPEERPTFEYIQSVLDD 425
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 92/211 (43%), Gaps = 24/211 (11%)
Query: 346 LGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXR-----DFEQQMEIVGRVGQHPNVVPLR 400
LGKG +G Y A ++S + +++EI + +HPN++ L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLY 74
Query: 401 AYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGG 460
Y++ L+ +Y G++ L + D + + A +++ HS
Sbjct: 75 GYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCHS--- 126
Query: 461 PKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR------SAGYRAPEVIETRK 514
+ H +IK N+L+ + I+DFG + V A SR + Y PE+IE R
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTXLCGTLDYLPPEMIEGRM 182
Query: 515 HSHKSDVYSFGVLLLEMLTGKAPLQSPTRDD 545
H K D++S GVL E L GK P ++ T +
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 213
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 91/208 (43%), Gaps = 24/208 (11%)
Query: 346 LGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXR-----DFEQQMEIVGRVGQHPNVVPLR 400
LGKG +G Y A ++S + +++EI + +HPN++ L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLY 77
Query: 401 AYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGG 460
Y++ L+ +Y G++ L + D + + A +++ HS
Sbjct: 78 GYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCHS--- 129
Query: 461 PKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR------SAGYRAPEVIETRK 514
+ H +IK N+L+ + I+DFG + V A SR + Y PE+IE R
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRDDLCGTLDYLPPEMIEGRM 185
Query: 515 HSHKSDVYSFGVLLLEMLTGKAPLQSPT 542
H K D++S GVL E L GK P ++ T
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEANT 213
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 92/211 (43%), Gaps = 24/211 (11%)
Query: 346 LGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXR-----DFEQQMEIVGRVGQHPNVVPLR 400
LGKG +G Y A ++S + +++EI + +HPN++ L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLY 77
Query: 401 AYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGG 460
Y++ L+ +Y G++ L + D + + A +++ HS
Sbjct: 78 GYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCHS--- 129
Query: 461 PKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR------SAGYRAPEVIETRK 514
+ H +IK N+L+ + I+DFG + V A SR + Y PE+IE R
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTTLCGTLDYLPPEMIEGRM 185
Query: 515 HSHKSDVYSFGVLLLEMLTGKAPLQSPTRDD 545
H K D++S GVL E L GK P ++ T +
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 216
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 92/211 (43%), Gaps = 24/211 (11%)
Query: 346 LGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXR-----DFEQQMEIVGRVGQHPNVVPLR 400
LGKG +G Y A ++S + +++EI + +HPN++ L
Sbjct: 15 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLY 73
Query: 401 AYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGG 460
Y++ L+ +Y G++ L + D + + A +++ HS
Sbjct: 74 GYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCHS--- 125
Query: 461 PKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR------SAGYRAPEVIETRK 514
+ H +IK N+L+ + I+DFG + V A SR + Y PE+IE R
Sbjct: 126 KRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTTLCGTLDYLPPEMIEGRM 181
Query: 515 HSHKSDVYSFGVLLLEMLTGKAPLQSPTRDD 545
H K D++S GVL E L GK P ++ T +
Sbjct: 182 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 212
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 107/235 (45%), Gaps = 30/235 (12%)
Query: 343 AEVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAY 402
+V+G GS+G Y+A L +S ++ E Q + R H N+V LR +
Sbjct: 38 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ---IMRKLDHCNIVRLRYF 94
Query: 403 YYSKDEKL------LVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTA-RGVAHI 455
+YS EK LV DY H +R P+ + VK+ + R +A+I
Sbjct: 95 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMYQLFRSLAYI 151
Query: 456 HSMGGPKFTHGNIKASNVLINQD---LDGCISDFGLTPLM-----NVPATPSRSAGYRAP 507
HS G H +IK N+L++ D L C DFG + NV SR YRAP
Sbjct: 152 HSFG---ICHRDIKPQNLLLDPDTAVLKLC--DFGSAKQLVRGEPNVSYICSRY--YRAP 204
Query: 508 EVI-ETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPT-RDDMVDLPRWVQSVVREE 560
E+I ++ DV+S G +L E+L G+ + D +V++ + + + RE+
Sbjct: 205 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 259
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 108/228 (47%), Gaps = 19/228 (8%)
Query: 330 SYNFDLEDLLRASAEVLGKGSYGTAYKAVLE-ESTTXXXXXXXXXXXXXRDFEQQMEIVG 388
S ++++ D + +G GS+GT YK + + F+ ++ ++
Sbjct: 5 SDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL- 63
Query: 389 RVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGT 448
R +H N++ L Y +K + +V + SL LH T + + I T
Sbjct: 64 RKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQT 118
Query: 449 ARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATP------SRSA 502
A+G+ ++H+ H ++K++N+ +++DL I DFGL + + + S S
Sbjct: 119 AQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSI 175
Query: 503 GYRAPEVIETRK---HSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMV 547
+ APEVI + +S +SDVY+FG++L E++TG+ P + D +
Sbjct: 176 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 223
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 108/228 (47%), Gaps = 19/228 (8%)
Query: 330 SYNFDLEDLLRASAEVLGKGSYGTAYKAVLE-ESTTXXXXXXXXXXXXXRDFEQQMEIVG 388
S ++++ D + +G GS+GT YK + + F+ ++ ++
Sbjct: 2 SDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL- 60
Query: 389 RVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGT 448
R +H N++ L Y +K + +V + SL LH T + + I T
Sbjct: 61 RKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQT 115
Query: 449 ARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATP------SRSA 502
A+G+ ++H+ H ++K++N+ +++DL I DFGL + + + S S
Sbjct: 116 AQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSI 172
Query: 503 GYRAPEVIETRK---HSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMV 547
+ APEVI + +S +SDVY+FG++L E++TG+ P + D +
Sbjct: 173 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 220
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 107/234 (45%), Gaps = 30/234 (12%)
Query: 344 EVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAYY 403
+V+G GS+G Y+A L +S ++ E Q + R H N+V LR ++
Sbjct: 60 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ---IMRKLDHCNIVRLRYFF 116
Query: 404 YSKDEKL------LVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTA-RGVAHIH 456
YS EK LV DY H +R P+ + VK+ + R +A+IH
Sbjct: 117 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMYQLFRSLAYIH 173
Query: 457 SMGGPKFTHGNIKASNVLINQD---LDGCISDFGLTPLM-----NVPATPSRSAGYRAPE 508
S G H +IK N+L++ D L C DFG + NV SR YRAPE
Sbjct: 174 SFG---ICHRDIKPQNLLLDPDTAVLKLC--DFGSAKQLVRGEPNVSYICSRY--YRAPE 226
Query: 509 VI-ETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPT-RDDMVDLPRWVQSVVREE 560
+I ++ DV+S G +L E+L G+ + D +V++ + + + RE+
Sbjct: 227 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 280
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 108/228 (47%), Gaps = 19/228 (8%)
Query: 330 SYNFDLEDLLRASAEVLGKGSYGTAYKAVLE-ESTTXXXXXXXXXXXXXRDFEQQMEIVG 388
S ++++ D + +G GS+GT YK + + F+ ++ ++
Sbjct: 5 SDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL- 63
Query: 389 RVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGT 448
R +H N++ L Y +K + +V + SL LH T + + I T
Sbjct: 64 RKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQT 118
Query: 449 ARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATP------SRSA 502
A+G+ ++H+ H ++K++N+ +++DL I DFGL + + + S S
Sbjct: 119 AQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSI 175
Query: 503 GYRAPEVIETRK---HSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMV 547
+ APEVI + +S +SDVY+FG++L E++TG+ P + D +
Sbjct: 176 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 223
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 107/234 (45%), Gaps = 30/234 (12%)
Query: 344 EVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAYY 403
+V+G GS+G Y+A L +S ++ E Q + R H N+V LR ++
Sbjct: 31 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ---IMRKLDHCNIVRLRYFF 87
Query: 404 YSKDEKL------LVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTA-RGVAHIH 456
YS EK LV DY H +R P+ + VK+ + R +A+IH
Sbjct: 88 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMYQLFRSLAYIH 144
Query: 457 SMGGPKFTHGNIKASNVLINQD---LDGCISDFGLTPLM-----NVPATPSRSAGYRAPE 508
S G H +IK N+L++ D L C DFG + NV SR YRAPE
Sbjct: 145 SFG---ICHRDIKPQNLLLDPDTAVLKLC--DFGSAKQLVRGEPNVSYICSRY--YRAPE 197
Query: 509 VI-ETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPT-RDDMVDLPRWVQSVVREE 560
+I ++ DV+S G +L E+L G+ + D +V++ + + + RE+
Sbjct: 198 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 251
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 101/212 (47%), Gaps = 19/212 (8%)
Query: 346 LGKGSYGTAYKAVLE-ESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAYYY 404
+G GS+GT YK + + F+ ++ ++ R +H N++ L Y
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL-RKTRHVNIL-LFMGYS 73
Query: 405 SKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFT 464
+K + +V + SL LH T + + I TA+G+ ++H+
Sbjct: 74 TKPQLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQTAQGMDYLHA---KSII 126
Query: 465 HGNIKASNVLINQDLDGCISDFGLTPLMNVPATP------SRSAGYRAPEVIETRK---H 515
H ++K++N+ +++DL I DFGL + + + S S + APEVI + +
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 186
Query: 516 SHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMV 547
S +SDVY+FG++L E++TG+ P + D +
Sbjct: 187 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 218
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 107/234 (45%), Gaps = 30/234 (12%)
Query: 344 EVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAYY 403
+V+G GS+G Y+A L +S ++ E Q + R H N+V LR ++
Sbjct: 54 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ---IMRKLDHCNIVRLRYFF 110
Query: 404 YSKDEKL------LVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTA-RGVAHIH 456
YS EK LV DY H +R P+ + VK+ + R +A+IH
Sbjct: 111 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMYQLFRSLAYIH 167
Query: 457 SMGGPKFTHGNIKASNVLINQD---LDGCISDFGLTPLM-----NVPATPSRSAGYRAPE 508
S G H +IK N+L++ D L C DFG + NV SR YRAPE
Sbjct: 168 SFG---ICHRDIKPQNLLLDPDTAVLKLC--DFGSAKQLVRGEPNVSYICSRY--YRAPE 220
Query: 509 VI-ETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPT-RDDMVDLPRWVQSVVREE 560
+I ++ DV+S G +L E+L G+ + D +V++ + + + RE+
Sbjct: 221 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 274
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 64/138 (46%), Gaps = 26/138 (18%)
Query: 95 ALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFSP--QLVVLDLSFNSF 152
++ L + N+L+G +P EI S+P L L L HN+ SG IP L +LDLS N
Sbjct: 633 SMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKL 692
Query: 153 TGNIPQSIQNLTXXXXXXXXXXXXXXXIPNFDIPKLRHLNLSYNGLKGSIP--SSLQKFP 210
G IPQ++ LT L ++LS N L G IP + FP
Sbjct: 693 DGRIPQAMSALTM----------------------LTEIDLSNNNLSGPIPEMGQFETFP 730
Query: 211 NSSFVGNSLLCGPPLKAC 228
+ F+ N LCG PL C
Sbjct: 731 PAKFLNNPGLCGYPLPRC 748
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 63/132 (47%), Gaps = 5/132 (3%)
Query: 81 LVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS- 139
L G IP+ +LG L L L L N+L G +P E+ + +L L L N+ +G+IPS S
Sbjct: 430 LSGTIPS-SLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSN 488
Query: 140 -PQLVVLDLSFNSFTGNIPQSIQNLTXXXXXXXXXXXXXXXIPN--FDIPKLRHLNLSYN 196
L + LS N TG IP+ I L IP D L L+L+ N
Sbjct: 489 CTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTN 548
Query: 197 GLKGSIPSSLQK 208
G+IP+++ K
Sbjct: 549 LFNGTIPAAMFK 560
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 61/136 (44%), Gaps = 8/136 (5%)
Query: 81 LVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFSP 140
G IP+ G D L L L N G +P S L L L NNFSG++P
Sbjct: 281 FTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLL 340
Query: 141 Q---LVVLDLSFNSFTGNIPQSIQNLTXXXXXXXXXXXXXX--XIPNF-DIPK--LRHLN 192
+ L VLDLSFN F+G +P+S+ NL+ +PN PK L+ L
Sbjct: 341 KMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELY 400
Query: 193 LSYNGLKGSIPSSLQK 208
L NG G IP +L
Sbjct: 401 LQNNGFTGKIPPTLSN 416
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 65/148 (43%), Gaps = 13/148 (8%)
Query: 83 GPI-PNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS-- 139
GPI PN + L+ L L++N TG +P +++ L L+L N SG IPSS
Sbjct: 382 GPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSL 441
Query: 140 PQLVVLDLSFNSFTGNIPQSIQNLTXXXXXXXXXXXXXXXIPN--FDIPKLRHLNLSYNG 197
+L L L N G IPQ + + IP+ + L ++LS N
Sbjct: 442 SKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNR 501
Query: 198 LKGSIPS--------SLQKFPNSSFVGN 217
L G IP ++ K N+SF GN
Sbjct: 502 LTGEIPKWIGRLENLAILKLSNNSFSGN 529
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 55/120 (45%), Gaps = 8/120 (6%)
Query: 96 LEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS---PQLVVLDLSFNSF 152
L++L++ SN G +P L SL+YL L N F+G+IP S L LDLS N F
Sbjct: 249 LKLLNISSNQFVGPIPP--LPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHF 306
Query: 153 TGNIPQSIQNLTXXXXXXXXXXXXXXXIPNFDIPKLRH---LNLSYNGLKGSIPSSLQKF 209
G +P + + +P + K+R L+LS+N G +P SL
Sbjct: 307 YGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNL 366
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 81 LVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFSP 140
L G IP +G + L +L+L N ++G +P E+ L L L L N G+IP + S
Sbjct: 644 LSGYIPK-EIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSA 702
Query: 141 --QLVVLDLSFNSFTGNIPQSIQ 161
L +DLS N+ +G IP+ Q
Sbjct: 703 LTMLTEIDLSNNNLSGPIPEMGQ 725
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 81 LVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFSP 140
L G IP +G+L+ L +L L +N +G +P+E+ SL +L L N F+G IP++
Sbjct: 502 LTGEIPK-WIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFK 560
Query: 141 Q 141
Q
Sbjct: 561 Q 561
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 33/69 (47%)
Query: 90 LGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFSPQLVVLDLSF 149
LG AL+ L + N L+G I++ L+ L + N F G IP L L L+
Sbjct: 219 LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAE 278
Query: 150 NSFTGNIPQ 158
N FTG IP
Sbjct: 279 NKFTGEIPD 287
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 71 VFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNF 130
+F L L + G IP+ +G L L +L L SN L G +P +++L L + L +NN
Sbjct: 658 LFILNLGHNDISGSIPD-EVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNL 716
Query: 131 SGKIP 135
SG IP
Sbjct: 717 SGPIP 721
Score = 32.3 bits (72), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 57/142 (40%), Gaps = 26/142 (18%)
Query: 92 KLDALEVLSLRSNVLTGG-LPSEITS--LPSLRYLYLQHNNFSGKIPSSFSPQLVVLDLS 148
KL++LEVL L +N ++G + + S L++L + N SG + S L LD+S
Sbjct: 149 KLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVS 208
Query: 149 FNSFTGNIP-----------------------QSIQNLTXXXXXXXXXXXXXXXIPNFDI 185
N+F+ IP ++I T IP +
Sbjct: 209 SNNFSTGIPFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPL 268
Query: 186 PKLRHLNLSYNGLKGSIPSSLQ 207
L++L+L+ N G IP L
Sbjct: 269 KSLQYLSLAENKFTGEIPDFLS 290
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 107/234 (45%), Gaps = 30/234 (12%)
Query: 344 EVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAYY 403
+V+G GS+G Y+A L +S ++ E Q + R H N+V LR ++
Sbjct: 62 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ---IMRKLDHCNIVRLRYFF 118
Query: 404 YSKDEKL------LVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTA-RGVAHIH 456
YS EK LV DY H +R P+ + VK+ + R +A+IH
Sbjct: 119 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMYQLFRSLAYIH 175
Query: 457 SMGGPKFTHGNIKASNVLINQD---LDGCISDFGLTPLM-----NVPATPSRSAGYRAPE 508
S G H +IK N+L++ D L C DFG + NV SR YRAPE
Sbjct: 176 SFG---ICHRDIKPQNLLLDPDTAVLKLC--DFGSAKQLVRGEPNVSYICSRY--YRAPE 228
Query: 509 VI-ETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPT-RDDMVDLPRWVQSVVREE 560
+I ++ DV+S G +L E+L G+ + D +V++ + + + RE+
Sbjct: 229 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 282
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 64/138 (46%), Gaps = 26/138 (18%)
Query: 95 ALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFSP--QLVVLDLSFNSF 152
++ L + N+L+G +P EI S+P L L L HN+ SG IP L +LDLS N
Sbjct: 630 SMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKL 689
Query: 153 TGNIPQSIQNLTXXXXXXXXXXXXXXXIPNFDIPKLRHLNLSYNGLKGSIP--SSLQKFP 210
G IPQ++ LT L ++LS N L G IP + FP
Sbjct: 690 DGRIPQAMSALTM----------------------LTEIDLSNNNLSGPIPEMGQFETFP 727
Query: 211 NSSFVGNSLLCGPPLKAC 228
+ F+ N LCG PL C
Sbjct: 728 PAKFLNNPGLCGYPLPRC 745
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 63/132 (47%), Gaps = 5/132 (3%)
Query: 81 LVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS- 139
L G IP+ +LG L L L L N+L G +P E+ + +L L L N+ +G+IPS S
Sbjct: 427 LSGTIPS-SLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSN 485
Query: 140 -PQLVVLDLSFNSFTGNIPQSIQNLTXXXXXXXXXXXXXXXIPN--FDIPKLRHLNLSYN 196
L + LS N TG IP+ I L IP D L L+L+ N
Sbjct: 486 CTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTN 545
Query: 197 GLKGSIPSSLQK 208
G+IP+++ K
Sbjct: 546 LFNGTIPAAMFK 557
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 61/136 (44%), Gaps = 8/136 (5%)
Query: 81 LVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFSP 140
G IP+ G D L L L N G +P S L L L NNFSG++P
Sbjct: 278 FTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLL 337
Query: 141 Q---LVVLDLSFNSFTGNIPQSIQNLTXXXXXXXXXXXXXX--XIPNF-DIPK--LRHLN 192
+ L VLDLSFN F+G +P+S+ NL+ +PN PK L+ L
Sbjct: 338 KMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELY 397
Query: 193 LSYNGLKGSIPSSLQK 208
L NG G IP +L
Sbjct: 398 LQNNGFTGKIPPTLSN 413
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 65/148 (43%), Gaps = 13/148 (8%)
Query: 83 GPI-PNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS-- 139
GPI PN + L+ L L++N TG +P +++ L L+L N SG IPSS
Sbjct: 379 GPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSL 438
Query: 140 PQLVVLDLSFNSFTGNIPQSIQNLTXXXXXXXXXXXXXXXIPN--FDIPKLRHLNLSYNG 197
+L L L N G IPQ + + IP+ + L ++LS N
Sbjct: 439 SKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNR 498
Query: 198 LKGSIPS--------SLQKFPNSSFVGN 217
L G IP ++ K N+SF GN
Sbjct: 499 LTGEIPKWIGRLENLAILKLSNNSFSGN 526
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 56/123 (45%), Gaps = 8/123 (6%)
Query: 96 LEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS---PQLVVLDLSFNSF 152
L++L++ SN G +P L SL+YL L N F+G+IP S L LDLS N F
Sbjct: 246 LKLLNISSNQFVGPIPP--LPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHF 303
Query: 153 TGNIPQSIQNLTXXXXXXXXXXXXXXXIPNFDIPKLRH---LNLSYNGLKGSIPSSLQKF 209
G +P + + +P + K+R L+LS+N G +P SL
Sbjct: 304 YGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNL 363
Query: 210 PNS 212
S
Sbjct: 364 SAS 366
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 81 LVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFSP 140
L G IP +G + L +L+L N ++G +P E+ L L L L N G+IP + S
Sbjct: 641 LSGYIPK-EIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSA 699
Query: 141 --QLVVLDLSFNSFTGNIPQSIQ 161
L +DLS N+ +G IP+ Q
Sbjct: 700 LTMLTEIDLSNNNLSGPIPEMGQ 722
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 81 LVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFSP 140
L G IP +G+L+ L +L L +N +G +P+E+ SL +L L N F+G IP++
Sbjct: 499 LTGEIPK-WIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFK 557
Query: 141 Q 141
Q
Sbjct: 558 Q 558
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 33/69 (47%)
Query: 90 LGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFSPQLVVLDLSF 149
LG AL+ L + N L+G I++ L+ L + N F G IP L L L+
Sbjct: 216 LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAE 275
Query: 150 NSFTGNIPQ 158
N FTG IP
Sbjct: 276 NKFTGEIPD 284
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 71 VFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNF 130
+F L L + G IP+ +G L L +L L SN L G +P +++L L + L +NN
Sbjct: 655 LFILNLGHNDISGSIPD-EVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNL 713
Query: 131 SGKIP 135
SG IP
Sbjct: 714 SGPIP 718
Score = 32.7 bits (73), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 57/142 (40%), Gaps = 26/142 (18%)
Query: 92 KLDALEVLSLRSNVLTGG-LPSEITS--LPSLRYLYLQHNNFSGKIPSSFSPQLVVLDLS 148
KL++LEVL L +N ++G + + S L++L + N SG + S L LD+S
Sbjct: 146 KLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVS 205
Query: 149 FNSFTGNIP-----------------------QSIQNLTXXXXXXXXXXXXXXXIPNFDI 185
N+F+ IP ++I T IP +
Sbjct: 206 SNNFSTGIPFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPL 265
Query: 186 PKLRHLNLSYNGLKGSIPSSLQ 207
L++L+L+ N G IP L
Sbjct: 266 KSLQYLSLAENKFTGEIPDFLS 287
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 108/228 (47%), Gaps = 19/228 (8%)
Query: 330 SYNFDLEDLLRASAEVLGKGSYGTAYKAVLE-ESTTXXXXXXXXXXXXXRDFEQQMEIVG 388
S ++++ D + +G GS+GT YK + + F+ ++ ++
Sbjct: 27 SDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL- 85
Query: 389 RVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGT 448
R +H N++ L Y +K + +V + SL LH T + + I T
Sbjct: 86 RKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQT 140
Query: 449 ARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATP------SRSA 502
A+G+ ++H+ H ++K++N+ +++DL I DFGL + + + S S
Sbjct: 141 AQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSI 197
Query: 503 GYRAPEVIETRK---HSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMV 547
+ APEVI + +S +SDVY+FG++L E++TG+ P + D +
Sbjct: 198 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 245
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 107/251 (42%), Gaps = 38/251 (15%)
Query: 379 DFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAG------ 432
D +ME++ +G+H N++ L ++ +Y + G+L L R G
Sbjct: 120 DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYN 179
Query: 433 -----RTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFG 487
L + V ARG+ ++ S K H ++ A NVL+ +D I+DFG
Sbjct: 180 PSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFG 236
Query: 488 LT-PLMNVPATPSRSAG-----YRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQS 540
L + ++ + G + APE + R ++H+SDV+SFGVLL E+ T G +P
Sbjct: 237 LARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG 296
Query: 541 PTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPN 600
+++ L + + + N E+ M++ C VP RP
Sbjct: 297 VPVEELFKLLKEGHRMDKP--------------SNCTNELYMMMR---DCWHAVPSQRPT 339
Query: 601 MDEVVRMIEEV 611
++V ++ +
Sbjct: 340 FKQLVEDLDRI 350
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 106/225 (47%), Gaps = 24/225 (10%)
Query: 326 FEGCSYNFDLEDLLRASAEVLGKGSYGTAYKAVLEESTTXXXXXX--XXXXXXXRDFEQQ 383
+E + + + ED E LG G++G YKA +E++ D+ +
Sbjct: 26 YEHVTRDLNPEDFWEIIGE-LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVE 84
Query: 384 MEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSL-STLLHGNRGAGRTPLDWETRV 442
++I+ HPN+V L +Y ++ ++ ++ A G++ + +L R PL T
Sbjct: 85 IDILASC-DHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELER-----PL---TES 135
Query: 443 KILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSA 502
+I + + + ++ + K H ++KA N+L D D ++DFG++ N R +
Sbjct: 136 QIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSA-KNTRTIQRRDS 194
Query: 503 -----GYRAPEVI-----ETRKHSHKSDVYSFGVLLLEMLTGKAP 537
+ APEV+ + R + +K+DV+S G+ L+EM + P
Sbjct: 195 FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 110/242 (45%), Gaps = 30/242 (12%)
Query: 336 EDLLRASAEVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPN 395
+++ +V+G GS+G Y+A L +S ++ E Q + R H N
Sbjct: 97 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ---IMRKLDHCN 153
Query: 396 VVPLRAYYYSKDEKL------LVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTA 449
+V LR ++YS EK LV DY H +R P+ + VK+ +
Sbjct: 154 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMYQL 210
Query: 450 -RGVAHIHSMGGPKFTHGNIKASNVLINQD---LDGCISDFGLTPLM-----NVPATPSR 500
R +A+IHS G H +IK N+L++ D L C DFG + NV SR
Sbjct: 211 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLC--DFGSAKQLVRGEPNVSYICSR 265
Query: 501 SAGYRAPEVI-ETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPT-RDDMVDLPRWVQSVVR 558
YRAPE+I ++ DV+S G +L E+L G+ + D +V++ + + + R
Sbjct: 266 Y--YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 323
Query: 559 EE 560
E+
Sbjct: 324 EQ 325
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 106/225 (47%), Gaps = 24/225 (10%)
Query: 326 FEGCSYNFDLEDLLRASAEVLGKGSYGTAYKAVLEESTTXXXXXX--XXXXXXXRDFEQQ 383
+E + + + ED E LG G++G YKA +E++ D+ +
Sbjct: 26 YEHVTRDLNPEDFWEIIGE-LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVE 84
Query: 384 MEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSL-STLLHGNRGAGRTPLDWETRV 442
++I+ HPN+V L +Y ++ ++ ++ A G++ + +L R PL T
Sbjct: 85 IDILASC-DHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELER-----PL---TES 135
Query: 443 KILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSA 502
+I + + + ++ + K H ++KA N+L D D ++DFG++ N R +
Sbjct: 136 QIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSA-KNTRXIQRRDS 194
Query: 503 -----GYRAPEVI-----ETRKHSHKSDVYSFGVLLLEMLTGKAP 537
+ APEV+ + R + +K+DV+S G+ L+EM + P
Sbjct: 195 FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 107/234 (45%), Gaps = 30/234 (12%)
Query: 344 EVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAYY 403
+V+G GS+G Y+A L +S ++ E Q + R H N+V LR ++
Sbjct: 64 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ---IMRKLDHCNIVRLRYFF 120
Query: 404 YSKDEKL------LVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTA-RGVAHIH 456
YS EK LV DY H +R P+ + VK+ + R +A+IH
Sbjct: 121 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMYQLFRSLAYIH 177
Query: 457 SMGGPKFTHGNIKASNVLINQD---LDGCISDFGLTPLM-----NVPATPSRSAGYRAPE 508
S G H +IK N+L++ D L C DFG + NV SR YRAPE
Sbjct: 178 SFG---ICHRDIKPQNLLLDPDTAVLKLC--DFGSAKQLVRGEPNVSYICSRY--YRAPE 230
Query: 509 VI-ETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPT-RDDMVDLPRWVQSVVREE 560
+I ++ DV+S G +L E+L G+ + D +V++ + + + RE+
Sbjct: 231 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 284
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 85/177 (48%), Gaps = 21/177 (11%)
Query: 379 DFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAG------ 432
D +ME++ +G+H N++ L ++ Y + G+L L R G
Sbjct: 86 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYD 145
Query: 433 --RTP---LDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFG 487
R P + ++ V ARG+ ++ S K H ++ A NVL+ ++ I+DFG
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFG 202
Query: 488 LT-PLMNVPATPSRSAG-----YRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAP 537
L + N+ + G + APE + R ++H+SDV+SFGVL+ E+ T G +P
Sbjct: 203 LARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 113/250 (45%), Gaps = 31/250 (12%)
Query: 314 GVQEPEKNKLVFFEGCSYNFDLEDLLRASAEVLGKGSYGTAYKAVLE-ESTTXXXXXXXX 372
G ++ + K + S ++++ D + +G GS+GT YK +
Sbjct: 12 GSEDRNRMKTLGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAP 71
Query: 373 XXXXXRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAG 432
+ F+ ++ ++ R +H N++ L Y +K + +V + SL LH
Sbjct: 72 TPQQLQAFKNEVGVL-RKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLH----II 125
Query: 433 RTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM 492
T + + I TA+G+ ++H+ H ++K++N+ +++DL I DFGL
Sbjct: 126 ETKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLA--- 179
Query: 493 NVPATPSRSAG------------YRAPEVIETRK---HSHKSDVYSFGVLLLEMLTGKAP 537
SR +G + APEVI + +S +SDVY+FG++L E++TG+ P
Sbjct: 180 ---TEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 236
Query: 538 LQSPTRDDMV 547
+ D +
Sbjct: 237 YSNINNRDQI 246
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 80/172 (46%), Gaps = 20/172 (11%)
Query: 379 DFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAG------ 432
D +ME++ +G+H N++ L ++ +Y + G+L L R G
Sbjct: 64 DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYN 123
Query: 433 -----RTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFG 487
L + V ARG+ ++ S K H ++ A NVL+ +D I+DFG
Sbjct: 124 PSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFG 180
Query: 488 LT-PLMNVPATPSRSAG-----YRAPEVIETRKHSHKSDVYSFGVLLLEMLT 533
L + ++ + G + APE + R ++H+SDV+SFGVLL E+ T
Sbjct: 181 LARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 83/177 (46%), Gaps = 21/177 (11%)
Query: 379 DFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAG------ 432
D +ME++ +G+H N++ L ++ +Y + G+L L R G
Sbjct: 79 DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYN 138
Query: 433 -----RTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFG 487
L + V ARG+ ++ S K H ++ A NVL+ +D I+DFG
Sbjct: 139 PSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFG 195
Query: 488 LT-PLMNVPATPSRSAG-----YRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAP 537
L + ++ + G + APE + R ++H+SDV+SFGVLL E+ T G +P
Sbjct: 196 LARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 252
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 82/172 (47%), Gaps = 20/172 (11%)
Query: 379 DFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAG------ 432
D +ME++ +G+H N++ L ++ Y + G+L L R G
Sbjct: 86 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYD 145
Query: 433 --RTP---LDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFG 487
R P + ++ V ARG+ ++ S K H ++ A NVL+ ++ I+DFG
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFG 202
Query: 488 LT-PLMNVPATPSRSAG-----YRAPEVIETRKHSHKSDVYSFGVLLLEMLT 533
L + N+ + G + APE + R ++H+SDV+SFGVL+ E+ T
Sbjct: 203 LARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 106/225 (47%), Gaps = 24/225 (10%)
Query: 326 FEGCSYNFDLEDLLRASAEVLGKGSYGTAYKAVLEESTTXXXXXX--XXXXXXXRDFEQQ 383
+E + + + ED E LG G++G YKA +E++ D+ +
Sbjct: 26 YEHVTRDLNPEDFWEIIGE-LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVE 84
Query: 384 MEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSL-STLLHGNRGAGRTPLDWETRV 442
++I+ HPN+V L +Y ++ ++ ++ A G++ + +L R PL T
Sbjct: 85 IDILASC-DHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELER-----PL---TES 135
Query: 443 KILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR-- 500
+I + + + ++ + K H ++KA N+L D D ++DFG++ N R
Sbjct: 136 QIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSA-KNTRXIQRRDX 194
Query: 501 ---SAGYRAPEVI-----ETRKHSHKSDVYSFGVLLLEMLTGKAP 537
+ + APEV+ + R + +K+DV+S G+ L+EM + P
Sbjct: 195 FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 125/292 (42%), Gaps = 46/292 (15%)
Query: 344 EVLGKGSYGTAYKAVLEES-----TTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVP 398
+V+G+G++G KA +++ RDF ++E++ ++G HPN++
Sbjct: 28 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 87
Query: 399 LRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTP-----------LDWETRVKILLG 447
L + L +Y G+L L +R P L + +
Sbjct: 88 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 147
Query: 448 TARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRS---AGY 504
ARG+ ++ +F H N+ A N+L+ ++ I+DFGL+ V + +
Sbjct: 148 VARGMDYLSQ---KQFIHRNLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRW 204
Query: 505 RAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVD-LPRWVQSVVREEWT 562
A E + ++ SDV+S+GVLL E+++ G P T ++ + LP+
Sbjct: 205 MAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQ----------- 253
Query: 563 AEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVV----RMIEE 610
L + N ++E+ +++ C + P RP+ +++ RM+EE
Sbjct: 254 ----GYRLEKPLNCDDEVYDLMR---QCWREKPYERPSFAQILVSLNRMLEE 298
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 80/172 (46%), Gaps = 20/172 (11%)
Query: 379 DFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAG------ 432
D +ME++ +G+H N++ L ++ +Y + G+L L R G
Sbjct: 68 DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYN 127
Query: 433 -----RTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFG 487
L + V ARG+ ++ S K H ++ A NVL+ +D I+DFG
Sbjct: 128 PSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFG 184
Query: 488 LT-PLMNVPATPSRSAG-----YRAPEVIETRKHSHKSDVYSFGVLLLEMLT 533
L + ++ + G + APE + R ++H+SDV+SFGVLL E+ T
Sbjct: 185 LARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 129/296 (43%), Gaps = 36/296 (12%)
Query: 332 NFDLEDLLRASAEV---LGKGSYGTAYKAVLEE-STTXXXXXXXXXXXXXRDFEQQMEIV 387
N+D ++ R + LG G YG Y+ V ++ S T +F ++ ++
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 68
Query: 388 GRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLG 447
+ +HPN+V L + ++ ++ G+L L R R E +LL
Sbjct: 69 KEI-KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQ----EVNAVVLLY 120
Query: 448 TARGVAH-IHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG--- 503
A ++ + + F H ++ A N L+ ++ ++DFGL+ LM + +
Sbjct: 121 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 180
Query: 504 --YRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREE 560
+ APE + K S KSDV++FGVLL E+ T G +P +DL + + + +
Sbjct: 181 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG------IDLSQVYELLEK-- 232
Query: 561 WTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDS 616
D + R + E++ ++++ AC P RP+ E+ + E + Q S
Sbjct: 233 ------DYRMERPEGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFETMFQESS 279
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 80/172 (46%), Gaps = 20/172 (11%)
Query: 379 DFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAG------ 432
D +ME++ +G+H N++ L ++ +Y + G+L L R G
Sbjct: 79 DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYN 138
Query: 433 -----RTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFG 487
L + V ARG+ ++ S K H ++ A NVL+ +D I+DFG
Sbjct: 139 PSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFG 195
Query: 488 LT-PLMNVPATPSRSAG-----YRAPEVIETRKHSHKSDVYSFGVLLLEMLT 533
L + ++ + G + APE + R ++H+SDV+SFGVLL E+ T
Sbjct: 196 LARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 80/172 (46%), Gaps = 20/172 (11%)
Query: 379 DFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAG------ 432
D +ME++ +G+H N++ L ++ +Y + G+L L R G
Sbjct: 72 DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYN 131
Query: 433 -----RTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFG 487
L + V ARG+ ++ S K H ++ A NVL+ +D I+DFG
Sbjct: 132 PSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFG 188
Query: 488 LT-PLMNVPATPSRSAG-----YRAPEVIETRKHSHKSDVYSFGVLLLEMLT 533
L + ++ + G + APE + R ++H+SDV+SFGVLL E+ T
Sbjct: 189 LARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 80/172 (46%), Gaps = 20/172 (11%)
Query: 379 DFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAG------ 432
D +ME++ +G+H N++ L ++ +Y + G+L L R G
Sbjct: 71 DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYN 130
Query: 433 -----RTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFG 487
L + V ARG+ ++ S K H ++ A NVL+ +D I+DFG
Sbjct: 131 PSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFG 187
Query: 488 LT-PLMNVPATPSRSAG-----YRAPEVIETRKHSHKSDVYSFGVLLLEMLT 533
L + ++ + G + APE + R ++H+SDV+SFGVLL E+ T
Sbjct: 188 LARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 129/296 (43%), Gaps = 36/296 (12%)
Query: 332 NFDLEDLLRASAEV---LGKGSYGTAYKAVLEE-STTXXXXXXXXXXXXXRDFEQQMEIV 387
N+D ++ R + LG G YG Y+ V ++ S T +F ++ ++
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 63
Query: 388 GRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLG 447
+ +HPN+V L + ++ ++ G+L L R R E +LL
Sbjct: 64 KEI-KHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL---RECNRQ----EVSAVVLLY 115
Query: 448 TARGVAH-IHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG--- 503
A ++ + + F H ++ A N L+ ++ ++DFGL+ LM + +
Sbjct: 116 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 175
Query: 504 --YRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREE 560
+ APE + K S KSDV++FGVLL E+ T G +P +DL + + + +
Sbjct: 176 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG------IDLSQVYELLEK-- 227
Query: 561 WTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDS 616
D + R + E++ ++++ AC P RP+ E+ + E + Q S
Sbjct: 228 ------DYRMERPEGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFETMFQESS 274
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 100/218 (45%), Gaps = 31/218 (14%)
Query: 346 LGKGSYGTAYKAVLE-ESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAYYY 404
+G GS+GT YK + + F+ ++ ++ R +H N++ L Y
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL-RKTRHVNIL-LFMGYS 73
Query: 405 SKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFT 464
+K + +V + SL LH T + + I TA+G+ ++H+
Sbjct: 74 TKPQLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQTAQGMDYLHA---KSII 126
Query: 465 HGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG------------YRAPEVIET 512
H ++K++N+ +++DL I DFGL SR +G + APEVI
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLA------TEKSRWSGSHQFEQLSGSILWMAPEVIRM 180
Query: 513 RK---HSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMV 547
+ +S +SDVY+FG++L E++TG+ P + D +
Sbjct: 181 QDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 218
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 129/296 (43%), Gaps = 36/296 (12%)
Query: 332 NFDLEDLLRASAEV---LGKGSYGTAYKAVLEE-STTXXXXXXXXXXXXXRDFEQQMEIV 387
N+D ++ R + LG G YG Y+ V ++ S T +F ++ ++
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 65
Query: 388 GRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLG 447
+ +HPN+V L + ++ ++ G+L L R R E +LL
Sbjct: 66 KEI-KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQ----EVNAVVLLY 117
Query: 448 TARGVAH-IHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG--- 503
A ++ + + F H ++ A N L+ ++ ++DFGL+ LM + +
Sbjct: 118 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 177
Query: 504 --YRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREE 560
+ APE + K S KSDV++FGVLL E+ T G +P +DL + + + +
Sbjct: 178 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG------IDLSQVYELLEK-- 229
Query: 561 WTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDS 616
D + R + E++ ++++ AC P RP+ E+ + E + Q S
Sbjct: 230 ------DYRMERPEGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFETMFQESS 276
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 129/296 (43%), Gaps = 36/296 (12%)
Query: 332 NFDLEDLLRASAEV---LGKGSYGTAYKAVLEE-STTXXXXXXXXXXXXXRDFEQQMEIV 387
N+D ++ R + LG G YG Y+ V ++ S T +F ++ ++
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 65
Query: 388 GRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLG 447
+ +HPN+V L + ++ ++ G+L L R R E +LL
Sbjct: 66 KEI-KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQ----EVNAVVLLY 117
Query: 448 TARGVAH-IHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG--- 503
A ++ + + F H ++ A N L+ ++ ++DFGL+ LM + +
Sbjct: 118 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 177
Query: 504 --YRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREE 560
+ APE + K S KSDV++FGVLL E+ T G +P +DL + + + +
Sbjct: 178 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG------IDLSQVYELLEK-- 229
Query: 561 WTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDS 616
D + R + E++ ++++ AC P RP+ E+ + E + Q S
Sbjct: 230 ------DYRMERPEGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFETMFQESS 276
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 129/296 (43%), Gaps = 36/296 (12%)
Query: 332 NFDLEDLLRASAEV---LGKGSYGTAYKAVLEE-STTXXXXXXXXXXXXXRDFEQQMEIV 387
N+D ++ R + LG G YG Y+ V ++ S T +F ++ ++
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 68
Query: 388 GRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLG 447
+ +HPN+V L + ++ ++ G+L L R R E +LL
Sbjct: 69 KEI-KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQ----EVSAVVLLY 120
Query: 448 TARGVAH-IHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG--- 503
A ++ + + F H ++ A N L+ ++ ++DFGL+ LM + +
Sbjct: 121 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 180
Query: 504 --YRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREE 560
+ APE + K S KSDV++FGVLL E+ T G +P +DL + + + +
Sbjct: 181 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG------IDLSQVYELLEK-- 232
Query: 561 WTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDS 616
D + R + E++ ++++ AC P RP+ E+ + E + Q S
Sbjct: 233 ------DYRMERPEGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFETMFQESS 279
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 107/234 (45%), Gaps = 31/234 (13%)
Query: 330 SYNFDLEDLLRASAEVLGKGSYGTAYKAVLE-ESTTXXXXXXXXXXXXXRDFEQQMEIVG 388
S ++++ D + +G GS+GT YK + + F+ ++ ++
Sbjct: 20 SDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL- 78
Query: 389 RVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGT 448
R +H N++ L Y +K + +V + SL LH T + + I T
Sbjct: 79 RKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQT 133
Query: 449 ARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG----- 503
A+G+ ++H+ H ++K++N+ +++DL I DFGL SR +G
Sbjct: 134 AQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLA------TEKSRWSGSHQFE 184
Query: 504 -------YRAPEVIETRK---HSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMV 547
+ APEVI + +S +SDVY+FG++L E++TG+ P + D +
Sbjct: 185 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 238
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 129/296 (43%), Gaps = 36/296 (12%)
Query: 332 NFDLEDLLRASAEV---LGKGSYGTAYKAVLEE-STTXXXXXXXXXXXXXRDFEQQMEIV 387
N+D ++ R + LG G YG Y+ V ++ S T +F ++ ++
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 63
Query: 388 GRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLG 447
+ +HPN+V L + ++ ++ G+L L R R E +LL
Sbjct: 64 KEI-KHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL---RECNRQ----EVSAVVLLY 115
Query: 448 TARGVAH-IHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG--- 503
A ++ + + F H ++ A N L+ ++ ++DFGL+ LM + +
Sbjct: 116 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 175
Query: 504 --YRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREE 560
+ APE + K S KSDV++FGVLL E+ T G +P +DL + + + +
Sbjct: 176 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG------IDLSQVYELLEK-- 227
Query: 561 WTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDS 616
D + R + E++ ++++ AC P RP+ E+ + E + Q S
Sbjct: 228 ------DYRMERPEGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFETMFQESS 274
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 129/296 (43%), Gaps = 36/296 (12%)
Query: 332 NFDLEDLLRASAEV---LGKGSYGTAYKAVLEE-STTXXXXXXXXXXXXXRDFEQQMEIV 387
N+D ++ R + LG G YG Y+ V ++ S T +F ++ ++
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 63
Query: 388 GRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLG 447
+ +HPN+V L + ++ ++ G+L L R R E +LL
Sbjct: 64 KEI-KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQ----EVSAVVLLY 115
Query: 448 TARGVAH-IHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG--- 503
A ++ + + F H ++ A N L+ ++ ++DFGL+ LM + +
Sbjct: 116 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 175
Query: 504 --YRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREE 560
+ APE + K S KSDV++FGVLL E+ T G +P +DL + + + +
Sbjct: 176 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG------IDLSQVYELLEK-- 227
Query: 561 WTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDS 616
D + R + E++ ++++ AC P RP+ E+ + E + Q S
Sbjct: 228 ------DYRMERPEGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFETMFQESS 274
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 122/279 (43%), Gaps = 33/279 (11%)
Query: 346 LGKGSYGTAYKAVLEE-STTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAYYY 404
LG G YG Y+ V ++ S T +F ++ ++ + +HPN+V L
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHPNLVQLLGVCT 77
Query: 405 SKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAH-IHSMGGPKF 463
+ ++ ++ G+L L R R E +LL A ++ + + F
Sbjct: 78 REPPFYIIIEFMTYGNLLDYL---RECNRQ----EVSAVVLLYMATQISSAMEYLEKKNF 130
Query: 464 THGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG-----YRAPEVIETRKHSHK 518
H ++ A N L+ ++ ++DFGL+ LM + + + APE + K S K
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIK 190
Query: 519 SDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNIE 577
SDV++FGVLL E+ T G +P P D P V ++ + D + R +
Sbjct: 191 SDVWAFGVLLWEIATYGMSPY--PGID-----PSQVYELLEK-------DYRMERPEGCP 236
Query: 578 EEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDS 616
E++ ++++ AC P RP+ E+ + E + Q S
Sbjct: 237 EKVYELMR---ACWQWNPSDRPSFAEIHQAFETMFQESS 272
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 129/296 (43%), Gaps = 36/296 (12%)
Query: 332 NFDLEDLLRASAEV---LGKGSYGTAYKAVLEE-STTXXXXXXXXXXXXXRDFEQQMEIV 387
N+D ++ R + LG G YG Y+ V ++ S T +F ++ ++
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 63
Query: 388 GRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLG 447
+ +HPN+V L + ++ ++ G+L L R R E +LL
Sbjct: 64 KEI-KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQ----EVSAVVLLY 115
Query: 448 TARGVAH-IHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG--- 503
A ++ + + F H ++ A N L+ ++ ++DFGL+ LM + +
Sbjct: 116 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 175
Query: 504 --YRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREE 560
+ APE + K S KSDV++FGVLL E+ T G +P +DL + + + +
Sbjct: 176 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG------IDLSQVYELLEK-- 227
Query: 561 WTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDS 616
D + R + E++ ++++ AC P RP+ E+ + E + Q S
Sbjct: 228 ------DYRMERPEGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFETMFQESS 274
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 80/166 (48%), Gaps = 19/166 (11%)
Query: 387 VGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILL 446
V ++ HPN+VP RA + + +E +V + A GS L+ + G L IL
Sbjct: 63 VSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNEL---AIAYILQ 119
Query: 447 GTARGVAHIHSMGGPKFTHGNIKASNVLINQD----LDGCISDFGLTP-------LMNVP 495
G + + +IH MG + H ++KAS++LI+ D L G S+ + + + P
Sbjct: 120 GVLKALDYIHHMG---YVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFP 176
Query: 496 ATPSRSAGYRAPEVIET--RKHSHKSDVYSFGVLLLEMLTGKAPLQ 539
+ + +PEV++ + + KSD+YS G+ E+ G P +
Sbjct: 177 KYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFK 222
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 92/211 (43%), Gaps = 24/211 (11%)
Query: 346 LGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXR-----DFEQQMEIVGRVGQHPNVVPLR 400
LGKG +G Y A ++S + +++EI + +HPN++ L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLY 77
Query: 401 AYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGG 460
Y++ L+ +Y G++ L + D + + A +++ HS
Sbjct: 78 GYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCHS--- 129
Query: 461 PKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR------SAGYRAPEVIETRK 514
+ H +IK N+L+ + I++FG + V A SR + Y PE+IE R
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIANFGWS----VHAPSSRRTTLCGTLDYLPPEMIEGRM 185
Query: 515 HSHKSDVYSFGVLLLEMLTGKAPLQSPTRDD 545
H K D++S GVL E L GK P ++ T +
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 216
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 91/211 (43%), Gaps = 24/211 (11%)
Query: 346 LGKGSYGTAYKAVLEE-----STTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLR 400
LGKG +G Y A ++ + +++EI + +HPN++ L
Sbjct: 13 LGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLY 71
Query: 401 AYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGG 460
Y++ L+ +Y G++ L + D + + A +++ HS
Sbjct: 72 GYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCHS--- 123
Query: 461 PKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR------SAGYRAPEVIETRK 514
+ H +IK N+L+ + I+DFG +V A SR + Y PE+IE R
Sbjct: 124 KRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMIEGRM 179
Query: 515 HSHKSDVYSFGVLLLEMLTGKAPLQSPTRDD 545
H K D++S GVL E L GK P ++ T +
Sbjct: 180 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 210
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 80/166 (48%), Gaps = 19/166 (11%)
Query: 387 VGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILL 446
V ++ HPN+VP RA + + +E +V + A GS L+ + G L IL
Sbjct: 79 VSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNEL---AIAYILQ 135
Query: 447 GTARGVAHIHSMGGPKFTHGNIKASNVLINQD----LDGCISDFGLTP-------LMNVP 495
G + + +IH MG + H ++KAS++LI+ D L G S+ + + + P
Sbjct: 136 GVLKALDYIHHMG---YVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFP 192
Query: 496 ATPSRSAGYRAPEVIET--RKHSHKSDVYSFGVLLLEMLTGKAPLQ 539
+ + +PEV++ + + KSD+YS G+ E+ G P +
Sbjct: 193 KYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFK 238
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 115/290 (39%), Gaps = 53/290 (18%)
Query: 344 EVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQME-----IVGRVGQHPNVVP 398
EV+G+G +G Y L ++ D + + I+ + HPNV+
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 94
Query: 399 LRAY-YYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAH-IH 456
L S+ L+V Y G L + R P VK L+G VA +
Sbjct: 95 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP-----TVKDLIGFGLQVAKGMK 146
Query: 457 SMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPS--RSAGYRAP------E 508
+ KF H ++ A N ++++ ++DFGL M S G + P E
Sbjct: 147 YLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALE 206
Query: 509 VIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDV 568
++T+K + KSDV+SFGVLL E++T AP P D FD+
Sbjct: 207 SLQTQKFTTKSDVWSFGVLLWELMTRGAP---PYPD------------------VNTFDI 245
Query: 569 ELMRFQNIEEEMVQ-------MLQIGMACVAKVPDMRPNMDEVVRMIEEV 611
+ Q ++Q + ++ + C +MRP+ E+V I +
Sbjct: 246 TVYLLQG--RRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 293
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 128/293 (43%), Gaps = 36/293 (12%)
Query: 332 NFDLEDLLRASAEV---LGKGSYGTAYKAVLEE-STTXXXXXXXXXXXXXRDFEQQMEIV 387
N+D ++ R + LG G YG Y+ V ++ S T +F ++ ++
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 68
Query: 388 GRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLG 447
+ +HPN+V L + ++ ++ G+L L R R E +LL
Sbjct: 69 KEI-KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQ----EVNAVVLLY 120
Query: 448 TARGVAH-IHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG--- 503
A ++ + + F H ++ A N L+ ++ ++DFGL+ LM + +
Sbjct: 121 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFP 180
Query: 504 --YRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREE 560
+ APE + K S KSDV++FGVLL E+ T G +P +DL + + + +
Sbjct: 181 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG------IDLSQVYELLEK-- 232
Query: 561 WTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQ 613
D + R + E++ ++++ AC P RP+ E+ + E + Q
Sbjct: 233 ------DYRMERPEGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFETMFQ 276
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 95/207 (45%), Gaps = 16/207 (7%)
Query: 344 EVLGKGSYGTAYKAV-LEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAY 402
E +G+G+ GT Y A+ + ++ +V R ++PN+V
Sbjct: 27 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 86
Query: 403 YYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPK 462
Y DE +V +Y A GSL+ ++ T +D + + + +HS +
Sbjct: 87 YLVGDELWVVMEYLAGGSLTDVV------TETCMDEGQIAAVCRECLQALEFLHS---NQ 137
Query: 463 FTHGNIKASNVLINQDLDGCISDFG----LTPLMNVPATPSRSAGYRAPEVIETRKHSHK 518
H +IK+ N+L+ D ++DFG +TP + + + + APEV+ + + K
Sbjct: 138 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPK 197
Query: 519 SDVYSFGVLLLEMLTGKAPL--QSPTR 543
D++S G++ +EM+ G+ P ++P R
Sbjct: 198 VDIWSLGIMAIEMIEGEPPYLNENPLR 224
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 128/293 (43%), Gaps = 36/293 (12%)
Query: 332 NFDLEDLLRASAEV---LGKGSYGTAYKAVLEE-STTXXXXXXXXXXXXXRDFEQQMEIV 387
N+D ++ R + LG G YG Y+ V ++ S T +F ++ ++
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 68
Query: 388 GRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLG 447
+ +HPN+V L + ++ ++ G+L L R R E +LL
Sbjct: 69 KEI-KHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL---RECNRQ----EVNAVVLLY 120
Query: 448 TARGVAH-IHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG--- 503
A ++ + + F H ++ A N L+ ++ ++DFGL+ LM + +
Sbjct: 121 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 180
Query: 504 --YRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREE 560
+ APE + K S KSDV++FGVLL E+ T G +P +DL + + + +
Sbjct: 181 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG------IDLSQVYELLEK-- 232
Query: 561 WTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQ 613
D + R + E++ ++++ AC P RP+ E+ + E + Q
Sbjct: 233 ------DYRMERPEGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFETMFQ 276
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 95/207 (45%), Gaps = 16/207 (7%)
Query: 344 EVLGKGSYGTAYKAV-LEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAY 402
E +G+G+ GT Y A+ + ++ +V R ++PN+V
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 403 YYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPK 462
Y DE +V +Y A GSL+ ++ T +D + + + +HS +
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVV------TETCMDEGQIAAVCRECLQALEFLHS---NQ 136
Query: 463 FTHGNIKASNVLINQDLDGCISDFG----LTPLMNVPATPSRSAGYRAPEVIETRKHSHK 518
H +IK+ N+L+ D ++DFG +TP + + + + APEV+ + + K
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPK 196
Query: 519 SDVYSFGVLLLEMLTGKAPL--QSPTR 543
D++S G++ +EM+ G+ P ++P R
Sbjct: 197 VDIWSLGIMAIEMIEGEPPYLNENPLR 223
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 95/207 (45%), Gaps = 16/207 (7%)
Query: 344 EVLGKGSYGTAYKAV-LEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAY 402
E +G+G+ GT Y A+ + ++ +V R ++PN+V
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 403 YYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPK 462
Y DE +V +Y A GSL+ ++ T +D + + + +HS +
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVV------TETCMDEGQIAAVCRECLQALEFLHS---NQ 136
Query: 463 FTHGNIKASNVLINQDLDGCISDFG----LTPLMNVPATPSRSAGYRAPEVIETRKHSHK 518
H +IK+ N+L+ D ++DFG +TP + + + + APEV+ + + K
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKAYGPK 196
Query: 519 SDVYSFGVLLLEMLTGKAPL--QSPTR 543
D++S G++ +EM+ G+ P ++P R
Sbjct: 197 VDIWSLGIMAIEMIEGEPPYLNENPLR 223
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 95/226 (42%), Gaps = 26/226 (11%)
Query: 328 GCSYNFDLEDLLRASAEVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXR-----DFEQ 382
G + LED LGKG +G Y A +S + +
Sbjct: 4 GSKRQWTLEDF--DIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRR 61
Query: 383 QMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRV 442
++EI + +HPN++ L Y++ L+ +Y G++ L + D +
Sbjct: 62 EVEIQSHL-RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK-----LSRFDEQRTA 115
Query: 443 KILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR-- 500
+ A +++ HS + H +IK N+L+ + + I+DFG +V A SR
Sbjct: 116 TYITELANALSYCHS---KRVIHRDIKPENLLLGSNGELKIADFG----WSVHAPSSRRT 168
Query: 501 ----SAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPT 542
+ Y PE+IE R H K D++S GVL E L G P ++ T
Sbjct: 169 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHT 214
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 95/226 (42%), Gaps = 26/226 (11%)
Query: 328 GCSYNFDLEDLLRASAEVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXR-----DFEQ 382
G + LED LGKG +G Y A +S + +
Sbjct: 4 GSKRQWTLEDF--DIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRR 61
Query: 383 QMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRV 442
++EI + +HPN++ L Y++ L+ +Y G++ L + D +
Sbjct: 62 EVEIQSHL-RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK-----LSRFDEQRTA 115
Query: 443 KILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR-- 500
+ A +++ HS + H +IK N+L+ + + I+DFG +V A SR
Sbjct: 116 TYITELANALSYCHS---KRVIHRDIKPENLLLGSNGELKIADFG----WSVHAPSSRRD 168
Query: 501 ----SAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPT 542
+ Y PE+IE R H K D++S GVL E L G P ++ T
Sbjct: 169 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHT 214
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 101/212 (47%), Gaps = 19/212 (8%)
Query: 346 LGKGSYGTAYKAVLE-ESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAYYY 404
+G GS+GT YK + + F+ ++ ++ R +H N++ Y
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL-RKTRHVNILLFMGY-- 72
Query: 405 SKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFT 464
S +L + + GS +L H + T + + I TA+G+ ++H+
Sbjct: 73 STAPQLAIVTQWCEGS--SLYH-HLHIIETKFEMIKLIDIARQTAQGMDYLHA---KSII 126
Query: 465 HGNIKASNVLINQDLDGCISDFGLTPLMNVPATP------SRSAGYRAPEVIETRK---H 515
H ++K++N+ +++DL I DFGL + + + S S + APEVI + +
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 186
Query: 516 SHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMV 547
S +SDVY+FG++L E++TG+ P + D +
Sbjct: 187 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 218
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 128/293 (43%), Gaps = 36/293 (12%)
Query: 332 NFDLEDLLRASAEV---LGKGSYGTAYKAVLEE-STTXXXXXXXXXXXXXRDFEQQMEIV 387
N+D ++ R + LG G YG Y+ V ++ S T +F ++ ++
Sbjct: 8 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 67
Query: 388 GRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLG 447
+ +HPN+V L + ++ ++ G+L L R R E +LL
Sbjct: 68 KEI-KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQ----EVNAVVLLY 119
Query: 448 TARGVAH-IHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG--- 503
A ++ + + F H ++ A N L+ ++ ++DFGL+ LM + +
Sbjct: 120 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 179
Query: 504 --YRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREE 560
+ APE + K S KSDV++FGVLL E+ T G +P +DL + + + +
Sbjct: 180 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG------IDLSQVYELLEK-- 231
Query: 561 WTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQ 613
D + R + E++ ++++ AC P RP+ E+ + E + Q
Sbjct: 232 ------DYRMERPEGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFETMFQ 275
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 128/293 (43%), Gaps = 36/293 (12%)
Query: 332 NFDLEDLLRASAEV---LGKGSYGTAYKAVLEE-STTXXXXXXXXXXXXXRDFEQQMEIV 387
N+D ++ R + LG G YG Y+ V ++ S T +F ++ ++
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 68
Query: 388 GRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLG 447
+ +HPN+V L + ++ ++ G+L L R R E +LL
Sbjct: 69 KEI-KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQ----EVNAVVLLY 120
Query: 448 TARGVAH-IHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG--- 503
A ++ + + F H ++ A N L+ ++ ++DFGL+ LM + +
Sbjct: 121 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 180
Query: 504 --YRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREE 560
+ APE + K S KSDV++FGVLL E+ T G +P +DL + + + +
Sbjct: 181 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG------IDLSQVYELLEK-- 232
Query: 561 WTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQ 613
D + R + E++ ++++ AC P RP+ E+ + E + Q
Sbjct: 233 ------DYRMERPEGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFETMFQ 276
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 115/290 (39%), Gaps = 53/290 (18%)
Query: 344 EVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQME-----IVGRVGQHPNVVP 398
EV+G+G +G Y L ++ D + + I+ + HPNV+
Sbjct: 55 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 114
Query: 399 LRAY-YYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAH-IH 456
L S+ L+V Y G L + R P VK L+G VA +
Sbjct: 115 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP-----TVKDLIGFGLQVAKGMK 166
Query: 457 SMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPS--RSAGYRAP------E 508
+ KF H ++ A N ++++ ++DFGL M S G + P E
Sbjct: 167 YLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 226
Query: 509 VIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDV 568
++T+K + KSDV+SFGVLL E++T AP P D FD+
Sbjct: 227 SLQTQKFTTKSDVWSFGVLLWELMTRGAP---PYPD------------------VNTFDI 265
Query: 569 ELMRFQNIEEEMVQ-------MLQIGMACVAKVPDMRPNMDEVVRMIEEV 611
+ Q ++Q + ++ + C +MRP+ E+V I +
Sbjct: 266 TVYLLQG--RRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 313
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 117/290 (40%), Gaps = 53/290 (18%)
Query: 344 EVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQME-----IVGRVGQHPNVVP 398
EV+G+G +G Y L ++ D + + I+ + HPNV+
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 96
Query: 399 LRAY-YYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAH-IH 456
L S+ L+V Y G L + R P VK L+G VA +
Sbjct: 97 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP-----TVKDLIGFGLQVAKGMK 148
Query: 457 SMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM---NVPATPSRSAG-----YRAPE 508
+ KF H ++ A N ++++ ++DFGL M + +++ + A E
Sbjct: 149 FLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALE 208
Query: 509 VIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDV 568
++T+K + KSDV+SFGVLL E++T AP P D FD+
Sbjct: 209 SLQTQKFTTKSDVWSFGVLLWELMTRGAP---PYPD------------------VNTFDI 247
Query: 569 ELMRFQNIEEEMVQ-------MLQIGMACVAKVPDMRPNMDEVVRMIEEV 611
+ Q ++Q + ++ + C +MRP+ E+V I +
Sbjct: 248 TVYLLQG--RRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 295
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 115/290 (39%), Gaps = 53/290 (18%)
Query: 344 EVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQME-----IVGRVGQHPNVVP 398
EV+G+G +G Y L ++ D + + I+ + HPNV+
Sbjct: 28 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 87
Query: 399 LRAY-YYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAH-IH 456
L S+ L+V Y G L + R P VK L+G VA +
Sbjct: 88 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP-----TVKDLIGFGLQVAKGMK 139
Query: 457 SMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPS--RSAGYRAP------E 508
+ KF H ++ A N ++++ ++DFGL M S G + P E
Sbjct: 140 YLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 199
Query: 509 VIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDV 568
++T+K + KSDV+SFGVLL E++T AP P D FD+
Sbjct: 200 SLQTQKFTTKSDVWSFGVLLWELMTRGAP---PYPD------------------VNTFDI 238
Query: 569 ELMRFQNIEEEMVQ-------MLQIGMACVAKVPDMRPNMDEVVRMIEEV 611
+ Q ++Q + ++ + C +MRP+ E+V I +
Sbjct: 239 TVYLLQG--RRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 286
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 117/290 (40%), Gaps = 53/290 (18%)
Query: 344 EVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQME-----IVGRVGQHPNVVP 398
EV+G+G +G Y L ++ D + + I+ + HPNV+
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 96
Query: 399 LRAY-YYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAH-IH 456
L S+ L+V Y G L + R P VK L+G VA +
Sbjct: 97 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP-----TVKDLIGFGLQVAKGMK 148
Query: 457 SMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM---NVPATPSRSAG-----YRAPE 508
+ KF H ++ A N ++++ ++DFGL M + +++ + A E
Sbjct: 149 FLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 208
Query: 509 VIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDV 568
++T+K + KSDV+SFGVLL E++T AP P D FD+
Sbjct: 209 SLQTQKFTTKSDVWSFGVLLWELMTRGAP---PYPD------------------VNTFDI 247
Query: 569 ELMRFQNIEEEMVQ-------MLQIGMACVAKVPDMRPNMDEVVRMIEEV 611
+ Q ++Q + ++ + C +MRP+ E+V I +
Sbjct: 248 TVYLLQG--RRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 295
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 128/293 (43%), Gaps = 36/293 (12%)
Query: 332 NFDLEDLLRASAEV---LGKGSYGTAYKAVLEE-STTXXXXXXXXXXXXXRDFEQQMEIV 387
N+D ++ R + LG G YG Y+ V ++ S T +F ++ ++
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 63
Query: 388 GRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLG 447
+ +HPN+V L + ++ ++ G+L L R R E +LL
Sbjct: 64 KEI-KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQ----EVNAVVLLY 115
Query: 448 TARGVAH-IHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG--- 503
A ++ + + F H ++ A N L+ ++ ++DFGL+ LM + +
Sbjct: 116 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 175
Query: 504 --YRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREE 560
+ APE + K S KSDV++FGVLL E+ T G +P +DL + + + +
Sbjct: 176 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG------IDLSQVYELLEK-- 227
Query: 561 WTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQ 613
D + R + E++ ++++ AC P RP+ E+ + E + Q
Sbjct: 228 ------DYRMERPEGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFETMFQ 271
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 115/290 (39%), Gaps = 53/290 (18%)
Query: 344 EVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQME-----IVGRVGQHPNVVP 398
EV+G+G +G Y L ++ D + + I+ + HPNV+
Sbjct: 54 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 113
Query: 399 LRAY-YYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAH-IH 456
L S+ L+V Y G L + R P VK L+G VA +
Sbjct: 114 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP-----TVKDLIGFGLQVAKGMK 165
Query: 457 SMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPS--RSAGYRAP------E 508
+ KF H ++ A N ++++ ++DFGL M S G + P E
Sbjct: 166 YLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 225
Query: 509 VIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDV 568
++T+K + KSDV+SFGVLL E++T AP P D FD+
Sbjct: 226 SLQTQKFTTKSDVWSFGVLLWELMTRGAP---PYPD------------------VNTFDI 264
Query: 569 ELMRFQNIEEEMVQ-------MLQIGMACVAKVPDMRPNMDEVVRMIEEV 611
+ Q ++Q + ++ + C +MRP+ E+V I +
Sbjct: 265 TVYLLQG--RRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 312
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 117/290 (40%), Gaps = 53/290 (18%)
Query: 344 EVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQME-----IVGRVGQHPNVVP 398
EV+G+G +G Y L ++ D + + I+ + HPNV+
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 93
Query: 399 LRAY-YYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAH-IH 456
L S+ L+V Y G L + R P VK L+G VA +
Sbjct: 94 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP-----TVKDLIGFGLQVAKGMK 145
Query: 457 SMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM---NVPATPSRSAG-----YRAPE 508
+ KF H ++ A N ++++ ++DFGL M + +++ + A E
Sbjct: 146 FLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 205
Query: 509 VIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDV 568
++T+K + KSDV+SFGVLL E++T AP P D FD+
Sbjct: 206 SLQTQKFTTKSDVWSFGVLLWELMTRGAP---PYPD------------------VNTFDI 244
Query: 569 ELMRFQNIEEEMVQ-------MLQIGMACVAKVPDMRPNMDEVVRMIEEV 611
+ Q ++Q + ++ + C +MRP+ E+V I +
Sbjct: 245 TVYLLQG--RRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 292
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 115/290 (39%), Gaps = 53/290 (18%)
Query: 344 EVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQME-----IVGRVGQHPNVVP 398
EV+G+G +G Y L ++ D + + I+ + HPNV+
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 399 LRAY-YYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAH-IH 456
L S+ L+V Y G L + R P VK L+G VA +
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP-----TVKDLIGFGLQVAKGMK 147
Query: 457 SMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPS--RSAGYRAP------E 508
+ KF H ++ A N ++++ ++DFGL M S G + P E
Sbjct: 148 YLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 207
Query: 509 VIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDV 568
++T+K + KSDV+SFGVLL E++T AP P D FD+
Sbjct: 208 SLQTQKFTTKSDVWSFGVLLWELMTRGAP---PYPD------------------VNTFDI 246
Query: 569 ELMRFQNIEEEMVQ-------MLQIGMACVAKVPDMRPNMDEVVRMIEEV 611
+ Q ++Q + ++ + C +MRP+ E+V I +
Sbjct: 247 TVYLLQG--RRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 117/290 (40%), Gaps = 53/290 (18%)
Query: 344 EVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQME-----IVGRVGQHPNVVP 398
EV+G+G +G Y L ++ D + + I+ + HPNV+
Sbjct: 95 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 154
Query: 399 LRAY-YYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAH-IH 456
L S+ L+V Y G L + R P VK L+G VA +
Sbjct: 155 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP-----TVKDLIGFGLQVAKGMK 206
Query: 457 SMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM---NVPATPSRSAG-----YRAPE 508
+ KF H ++ A N ++++ ++DFGL M + +++ + A E
Sbjct: 207 FLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 266
Query: 509 VIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDV 568
++T+K + KSDV+SFGVLL E++T AP P D FD+
Sbjct: 267 SLQTQKFTTKSDVWSFGVLLWELMTRGAP---PYPD------------------VNTFDI 305
Query: 569 ELMRFQNIEEEMVQ-------MLQIGMACVAKVPDMRPNMDEVVRMIEEV 611
+ Q ++Q + ++ + C +MRP+ E+V I +
Sbjct: 306 TVYLLQG--RRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 353
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 117/290 (40%), Gaps = 53/290 (18%)
Query: 344 EVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQME-----IVGRVGQHPNVVP 398
EV+G+G +G Y L ++ D + + I+ + HPNV+
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 399 LRAY-YYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAH-IH 456
L S+ L+V Y G L + R P VK L+G VA +
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP-----TVKDLIGFGLQVAKGMK 147
Query: 457 SMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM---NVPATPSRSAG-----YRAPE 508
+ KF H ++ A N ++++ ++DFGL M + +++ + A E
Sbjct: 148 FLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 207
Query: 509 VIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDV 568
++T+K + KSDV+SFGVLL E++T AP P D FD+
Sbjct: 208 SLQTQKFTTKSDVWSFGVLLWELMTRGAP---PYPD------------------VNTFDI 246
Query: 569 ELMRFQNIEEEMVQ-------MLQIGMACVAKVPDMRPNMDEVVRMIEEV 611
+ Q ++Q + ++ + C +MRP+ E+V I +
Sbjct: 247 TVYLLQG--RRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 117/290 (40%), Gaps = 53/290 (18%)
Query: 344 EVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQME-----IVGRVGQHPNVVP 398
EV+G+G +G Y L ++ D + + I+ + HPNV+
Sbjct: 41 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 100
Query: 399 LRAY-YYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAH-IH 456
L S+ L+V Y G L + R P VK L+G VA +
Sbjct: 101 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP-----TVKDLIGFGLQVAKGMK 152
Query: 457 SMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM---NVPATPSRSAG-----YRAPE 508
+ KF H ++ A N ++++ ++DFGL M + +++ + A E
Sbjct: 153 FLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 212
Query: 509 VIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDV 568
++T+K + KSDV+SFGVLL E++T AP P D FD+
Sbjct: 213 SLQTQKFTTKSDVWSFGVLLWELMTRGAP---PYPD------------------VNTFDI 251
Query: 569 ELMRFQNIEEEMVQ-------MLQIGMACVAKVPDMRPNMDEVVRMIEEV 611
+ Q ++Q + ++ + C +MRP+ E+V I +
Sbjct: 252 TVYLLQG--RRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 299
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 117/290 (40%), Gaps = 53/290 (18%)
Query: 344 EVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQME-----IVGRVGQHPNVVP 398
EV+G+G +G Y L ++ D + + I+ + HPNV+
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 399 LRAY-YYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAH-IH 456
L S+ L+V Y G L + R P VK L+G VA +
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP-----TVKDLIGFGLQVAKGMK 147
Query: 457 SMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM---NVPATPSRSAG-----YRAPE 508
+ KF H ++ A N ++++ ++DFGL M + +++ + A E
Sbjct: 148 FLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 207
Query: 509 VIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDV 568
++T+K + KSDV+SFGVLL E++T AP P D FD+
Sbjct: 208 SLQTQKFTTKSDVWSFGVLLWELMTRGAP---PYPD------------------VNTFDI 246
Query: 569 ELMRFQNIEEEMVQ-------MLQIGMACVAKVPDMRPNMDEVVRMIEEV 611
+ Q ++Q + ++ + C +MRP+ E+V I +
Sbjct: 247 TVYLLQG--RRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 102/214 (47%), Gaps = 28/214 (13%)
Query: 337 DLLRASAEVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNV 396
++ + +V+G GS+G ++A L ES + F+ + + R+ +HPNV
Sbjct: 39 EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQD----KRFKNRELQIMRIVKHPNV 94
Query: 397 VPLRAYYYS----KDEKL--LVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKI-LLGTA 449
V L+A++YS KDE LV +Y H + P+ +K+ +
Sbjct: 95 VDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPM---LLIKLYMYQLL 151
Query: 450 RGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCIS--DFGLTPLM-----NVPATPSRSA 502
R +A+IHS+G H +IK N+L++ G + DFG ++ NV SR
Sbjct: 152 RSLAYIHSIG---ICHRDIKPQNLLLDPP-SGVLKLIDFGSAKILIAGEPNVSXICSRY- 206
Query: 503 GYRAPEVI-ETRKHSHKSDVYSFGVLLLEMLTGK 535
YRAPE+I ++ D++S G ++ E++ G+
Sbjct: 207 -YRAPELIFGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 79/157 (50%), Gaps = 15/157 (9%)
Query: 386 IVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKIL 445
++ R H NVV + + Y DE +V ++ G+L+ ++ R ++ E +
Sbjct: 94 VIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDIVTHTR------MNEEQIATVC 147
Query: 446 LGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR----- 500
L R ++++H+ G H +IK+ ++L+ D +SDFG ++ P R
Sbjct: 148 LSVLRALSYLHNQG---VIHRDIKSDSILLTSDGRIKLSDFGFCAQVS-KEVPKRKXLVG 203
Query: 501 SAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAP 537
+ + APEVI + + D++S G++++EM+ G+ P
Sbjct: 204 TPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPP 240
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 125/292 (42%), Gaps = 46/292 (15%)
Query: 344 EVLGKGSYGTAYKAVLEES-----TTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVP 398
+V+G+G++G KA +++ RDF ++E++ ++G HPN++
Sbjct: 31 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 90
Query: 399 LRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTP-----------LDWETRVKILLG 447
L + L +Y G+L L +R P L + +
Sbjct: 91 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 150
Query: 448 TARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRS---AGY 504
ARG+ ++ +F H ++ A N+L+ ++ I+DFGL+ V + +
Sbjct: 151 VARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRW 207
Query: 505 RAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVD-LPRWVQSVVREEWT 562
A E + ++ SDV+S+GVLL E+++ G P T ++ + LP+
Sbjct: 208 MAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQ----------- 256
Query: 563 AEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVV----RMIEE 610
L + N ++E+ +++ C + P RP+ +++ RM+EE
Sbjct: 257 ----GYRLEKPLNCDDEVYDLMR---QCWREKPYERPSFAQILVSLNRMLEE 301
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 115/290 (39%), Gaps = 53/290 (18%)
Query: 344 EVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQME-----IVGRVGQHPNVVP 398
EV+G+G +G Y L ++ D + + I+ + HPNV+
Sbjct: 31 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 90
Query: 399 LRAY-YYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAH-IH 456
L S+ L+V Y G L + R P VK L+G VA +
Sbjct: 91 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP-----TVKDLIGFGLQVAKGMK 142
Query: 457 SMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPS--RSAGYRAP------E 508
+ KF H ++ A N ++++ ++DFGL M S G + P E
Sbjct: 143 YLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 202
Query: 509 VIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDV 568
++T+K + KSDV+SFGVLL E++T AP P D FD+
Sbjct: 203 SLQTQKFTTKSDVWSFGVLLWELMTRGAP---PYPD------------------VNTFDI 241
Query: 569 ELMRFQNIEEEMVQ-------MLQIGMACVAKVPDMRPNMDEVVRMIEEV 611
+ Q ++Q + ++ + C +MRP+ E+V I +
Sbjct: 242 TVYLLQG--RRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 289
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 115/290 (39%), Gaps = 53/290 (18%)
Query: 344 EVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQME-----IVGRVGQHPNVVP 398
EV+G+G +G Y L ++ D + + I+ + HPNV+
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 93
Query: 399 LRAY-YYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAH-IH 456
L S+ L+V Y G L + R P VK L+G VA +
Sbjct: 94 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP-----TVKDLIGFGLQVAKGMK 145
Query: 457 SMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPS--RSAGYRAP------E 508
+ KF H ++ A N ++++ ++DFGL M S G + P E
Sbjct: 146 YLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 205
Query: 509 VIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDV 568
++T+K + KSDV+SFGVLL E++T AP P D FD+
Sbjct: 206 SLQTQKFTTKSDVWSFGVLLWELMTRGAP---PYPD------------------VNTFDI 244
Query: 569 ELMRFQNIEEEMVQ-------MLQIGMACVAKVPDMRPNMDEVVRMIEEV 611
+ Q ++Q + ++ + C +MRP+ E+V I +
Sbjct: 245 TVYLLQG--RRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 292
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 115/290 (39%), Gaps = 53/290 (18%)
Query: 344 EVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQME-----IVGRVGQHPNVVP 398
EV+G+G +G Y L ++ D + + I+ + HPNV+
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 94
Query: 399 LRAY-YYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAH-IH 456
L S+ L+V Y G L + R P VK L+G VA +
Sbjct: 95 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP-----TVKDLIGFGLQVAKGMK 146
Query: 457 SMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPS--RSAGYRAP------E 508
+ KF H ++ A N ++++ ++DFGL M S G + P E
Sbjct: 147 YLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 206
Query: 509 VIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDV 568
++T+K + KSDV+SFGVLL E++T AP P D FD+
Sbjct: 207 SLQTQKFTTKSDVWSFGVLLWELMTRGAP---PYPD------------------VNTFDI 245
Query: 569 ELMRFQNIEEEMVQ-------MLQIGMACVAKVPDMRPNMDEVVRMIEEV 611
+ Q ++Q + ++ + C +MRP+ E+V I +
Sbjct: 246 TVYLLQG--RRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 293
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 122/279 (43%), Gaps = 33/279 (11%)
Query: 346 LGKGSYGTAYKAVLEE-STTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAYYY 404
LG G YG Y+ V ++ S T +F ++ ++ + +HPN+V L
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHPNLVQLLGVCT 77
Query: 405 SKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAH-IHSMGGPKF 463
+ ++ ++ G+L L R R E +LL A ++ + + F
Sbjct: 78 REPPFYIITEFMTYGNLLDYL---RECNRQ----EVSAVVLLYMATQISSAMEYLEKKNF 130
Query: 464 THGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG-----YRAPEVIETRKHSHK 518
H ++ A N L+ ++ ++DFGL+ LM + + + APE + K S K
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNKFSIK 190
Query: 519 SDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNIE 577
SDV++FGVLL E+ T G +P P D P V ++ + D + R +
Sbjct: 191 SDVWAFGVLLWEIATYGMSPY--PGID-----PSQVYELLEK-------DYRMERPEGCP 236
Query: 578 EEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDS 616
E++ ++++ AC P RP+ E+ + E + Q S
Sbjct: 237 EKVYELMR---ACWQWNPSDRPSFAEIHQAFETMFQESS 272
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 98/225 (43%), Gaps = 24/225 (10%)
Query: 330 SYNFDLEDLLRASAEVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRD-----FEQQM 384
+ D D++R LGKG +G Y A +++ ++ +++
Sbjct: 10 KFTIDDFDIVRP----LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREI 65
Query: 385 EIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKI 444
EI + +HPN++ + Y++ + L+ ++ G L L + GR D +
Sbjct: 66 EIQSHL-RHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKH---GR--FDEQRSATF 119
Query: 445 LLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR---- 500
+ A + + H K H +IK N+L+ + I+DFG + ++ P+ R
Sbjct: 120 MEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCG 174
Query: 501 SAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDD 545
+ Y PE+IE + H K D++ GVL E L G P SP+ +
Sbjct: 175 TLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTE 219
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 115/290 (39%), Gaps = 53/290 (18%)
Query: 344 EVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQME-----IVGRVGQHPNVVP 398
EV+G+G +G Y L ++ D + + I+ + HPNV+
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 399 LRAY-YYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAH-IH 456
L S+ L+V Y G L + R P VK L+G VA +
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP-----TVKDLIGFGLQVAKGMK 147
Query: 457 SMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPS--RSAGYRAP------E 508
+ KF H ++ A N ++++ ++DFGL M S G + P E
Sbjct: 148 YLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 207
Query: 509 VIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDV 568
++T+K + KSDV+SFGVLL E++T AP P D FD+
Sbjct: 208 SLQTQKFTTKSDVWSFGVLLWELMTRGAP---PYPD------------------VNTFDI 246
Query: 569 ELMRFQNIEEEMVQ-------MLQIGMACVAKVPDMRPNMDEVVRMIEEV 611
+ Q ++Q + ++ + C +MRP+ E+V I +
Sbjct: 247 TVYLLQG--RRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 115/290 (39%), Gaps = 53/290 (18%)
Query: 344 EVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQME-----IVGRVGQHPNVVP 398
EV+G+G +G Y L ++ D + + I+ + HPNV+
Sbjct: 33 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 92
Query: 399 LRAY-YYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAH-IH 456
L S+ L+V Y G L + R P VK L+G VA +
Sbjct: 93 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP-----TVKDLIGFGLQVAKGMK 144
Query: 457 SMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPS--RSAGYRAP------E 508
+ KF H ++ A N ++++ ++DFGL M S G + P E
Sbjct: 145 YLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 204
Query: 509 VIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDV 568
++T+K + KSDV+SFGVLL E++T AP P D FD+
Sbjct: 205 SLQTQKFTTKSDVWSFGVLLWELMTRGAP---PYPD------------------VNTFDI 243
Query: 569 ELMRFQNIEEEMVQ-------MLQIGMACVAKVPDMRPNMDEVVRMIEEV 611
+ Q ++Q + ++ + C +MRP+ E+V I +
Sbjct: 244 TVYLLQG--RRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 291
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 92/209 (44%), Gaps = 20/209 (9%)
Query: 346 LGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRD-----FEQQMEIVGRVGQHPNVVPLR 400
LGKG +G Y A +++ ++ +++EI + +HPN++ +
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHL-RHPNILRMY 81
Query: 401 AYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGG 460
Y++ + L+ ++ G L L + GR D + + A + + H
Sbjct: 82 NYFHDRKRIYLMLEFAPRGELYKELQKH---GR--FDEQRSATFMEELADALHYCHER-- 134
Query: 461 PKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR----SAGYRAPEVIETRKHS 516
K H +IK N+L+ + I+DFG + ++ P+ R + Y PE+IE + H
Sbjct: 135 -KVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGTLDYLPPEMIEGKTHD 191
Query: 517 HKSDVYSFGVLLLEMLTGKAPLQSPTRDD 545
K D++ GVL E L G P SP+ +
Sbjct: 192 EKVDLWCAGVLCYEFLVGMPPFDSPSHTE 220
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 125/292 (42%), Gaps = 46/292 (15%)
Query: 344 EVLGKGSYGTAYKAVLEES-----TTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVP 398
+V+G+G++G KA +++ RDF ++E++ ++G HPN++
Sbjct: 21 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 80
Query: 399 LRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTP-----------LDWETRVKILLG 447
L + L +Y G+L L +R P L + +
Sbjct: 81 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 140
Query: 448 TARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRS---AGY 504
ARG+ ++ +F H ++ A N+L+ ++ I+DFGL+ V + +
Sbjct: 141 VARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRW 197
Query: 505 RAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVD-LPRWVQSVVREEWT 562
A E + ++ SDV+S+GVLL E+++ G P T ++ + LP+
Sbjct: 198 MAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQ----------- 246
Query: 563 AEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVV----RMIEE 610
L + N ++E+ +++ C + P RP+ +++ RM+EE
Sbjct: 247 ----GYRLEKPLNCDDEVYDLMR---QCWREKPYERPSFAQILVSLNRMLEE 291
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 92/209 (44%), Gaps = 20/209 (9%)
Query: 346 LGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRD-----FEQQMEIVGRVGQHPNVVPLR 400
LGKG +G Y A +++ ++ +++EI + +HPN++ +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHL-RHPNILRMY 80
Query: 401 AYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGG 460
Y++ + L+ ++ G L L + GR D + + A + + H
Sbjct: 81 NYFHDRKRIYLMLEFAPRGELYKELQKH---GR--FDEQRSATFMEELADALHYCHER-- 133
Query: 461 PKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR----SAGYRAPEVIETRKHS 516
K H +IK N+L+ + I+DFG + ++ P+ R + Y PE+IE + H
Sbjct: 134 -KVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGTLDYLPPEMIEGKTHD 190
Query: 517 HKSDVYSFGVLLLEMLTGKAPLQSPTRDD 545
K D++ GVL E L G P SP+ +
Sbjct: 191 EKVDLWCAGVLCYEFLVGMPPFDSPSHTE 219
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 79/172 (45%), Gaps = 20/172 (11%)
Query: 379 DFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAG------ 432
D +ME++ +G+H N++ L ++ +Y + G+L L G
Sbjct: 79 DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYN 138
Query: 433 -----RTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFG 487
L + V ARG+ ++ S K H ++ A NVL+ +D I+DFG
Sbjct: 139 PSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFG 195
Query: 488 LT-PLMNVPATPSRSAG-----YRAPEVIETRKHSHKSDVYSFGVLLLEMLT 533
L + ++ + G + APE + R ++H+SDV+SFGVLL E+ T
Sbjct: 196 LARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 94/210 (44%), Gaps = 19/210 (9%)
Query: 343 AEVLGKGSYGT---AYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPL 399
+ LG+G+YG A V EE+ + ++++ I ++ H NVV
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXI-NKMLNHENVVKF 69
Query: 400 RAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMG 459
+ + + L +Y + G L + + G + GV ++H +G
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-----RFFHQLMAGVVYLHGIG 124
Query: 460 GPKFTHGNIKASNVLINQDLDGCISDFGLTPLM---NVPATPSRSAG---YRAPEVIETR 513
TH +IK N+L+++ + ISDFGL + N ++ G Y APE+++ R
Sbjct: 125 ---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 514 K-HSHKSDVYSFGVLLLEMLTGKAPLQSPT 542
+ H+ DV+S G++L ML G+ P P+
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPS 211
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 94/210 (44%), Gaps = 19/210 (9%)
Query: 343 AEVLGKGSYGT---AYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPL 399
+ LG+G+YG A V EE+ + ++++ + ++ H NVV
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI-CINKMLNHENVVKF 70
Query: 400 RAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMG 459
+ + + L +Y + G L + + G + GV ++H +G
Sbjct: 71 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-----RFFHQLMAGVVYLHGIG 125
Query: 460 GPKFTHGNIKASNVLINQDLDGCISDFGLTPLM---NVPATPSRSAG---YRAPEVIETR 513
TH +IK N+L+++ + ISDFGL + N ++ G Y APE+++ R
Sbjct: 126 ---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 514 K-HSHKSDVYSFGVLLLEMLTGKAPLQSPT 542
+ H+ DV+S G++L ML G+ P P+
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPS 212
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 126/289 (43%), Gaps = 36/289 (12%)
Query: 332 NFDLEDLLRASAEV---LGKGSYGTAYKAVLEE-STTXXXXXXXXXXXXXRDFEQQMEIV 387
N+D ++ R + LG G YG Y+ V ++ S T +F ++ ++
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 63
Query: 388 GRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLG 447
+ +HPN+V L + ++ ++ G+L L R R E +LL
Sbjct: 64 KEI-KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQ----EVNAVVLLY 115
Query: 448 TARGVAH-IHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG--- 503
A ++ + + F H ++ A N L+ ++ ++DFGL+ LM + +
Sbjct: 116 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 175
Query: 504 --YRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREE 560
+ APE + K S KSDV++FGVLL E+ T G +P +DL + + + +
Sbjct: 176 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG------IDLSQVYELLEK-- 227
Query: 561 WTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIE 609
D + R + E++ ++++ AC P RP+ E+ + E
Sbjct: 228 ------DYRMERPEGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFE 267
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 108/258 (41%), Gaps = 51/258 (19%)
Query: 296 GKASSGGRSE--KPKEEFGSGVQEPEKNKLVFFEGCSYNFDLEDLLRASAEVLGKGSYGT 353
G S+ G E +PKE G GV + C + ++ +V G GS+
Sbjct: 8 GSHSTHGFYENYEPKEILGRGVSSVVRR-------CIHKPTCKEYAVKIIDVTGGGSFSA 60
Query: 354 AYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVY 413
L E+T ++++I+ +V HPN++ L+ Y + LV+
Sbjct: 61 EEVQELREATL-----------------KEVDILRKVSGHPNIIQLKDTYETNTFFFLVF 103
Query: 414 DYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNV 473
D G L L T + ETR KI+ + +H + H ++K N+
Sbjct: 104 DLMKKGELFDYL----TEKVTLSEKETR-KIMRALLEVICALHKLN---IVHRDLKPENI 155
Query: 474 LINQDLDGCISDFGLT-------PLMNVPATPSRSAGYRAPEVIETRK------HSHKSD 520
L++ D++ ++DFG + L +V TPS Y APE+IE + + D
Sbjct: 156 LLDDDMNIKLTDFGFSCQLDPGEKLRSVCGTPS----YLAPEIIECSMNDNHPGYGKEVD 211
Query: 521 VYSFGVLLLEMLTGKAPL 538
++S GV++ +L G P
Sbjct: 212 MWSTGVIMYTLLAGSPPF 229
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 94/210 (44%), Gaps = 19/210 (9%)
Query: 343 AEVLGKGSYGT---AYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPL 399
+ LG+G+YG A V EE+ + ++++ + ++ H NVV
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI-CINKMLNHENVVKF 69
Query: 400 RAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMG 459
+ + + L +Y + G L + + G + GV ++H +G
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-----RFFHQLMAGVVYLHGIG 124
Query: 460 GPKFTHGNIKASNVLINQDLDGCISDFGLTPLM---NVPATPSRSAG---YRAPEVIETR 513
TH +IK N+L+++ + ISDFGL + N ++ G Y APE+++ R
Sbjct: 125 ---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 514 K-HSHKSDVYSFGVLLLEMLTGKAPLQSPT 542
+ H+ DV+S G++L ML G+ P P+
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPS 211
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 94/210 (44%), Gaps = 19/210 (9%)
Query: 343 AEVLGKGSYGT---AYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPL 399
+ LG+G+YG A V EE+ + ++++ + ++ H NVV
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI-CINKMLNHENVVKF 69
Query: 400 RAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMG 459
+ + + L +Y + G L + + G + GV ++H +G
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-----RFFHQLMAGVVYLHGIG 124
Query: 460 GPKFTHGNIKASNVLINQDLDGCISDFGLTPLM---NVPATPSRSAG---YRAPEVIETR 513
TH +IK N+L+++ + ISDFGL + N ++ G Y APE+++ R
Sbjct: 125 ---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 514 K-HSHKSDVYSFGVLLLEMLTGKAPLQSPT 542
+ H+ DV+S G++L ML G+ P P+
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPS 211
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 94/210 (44%), Gaps = 19/210 (9%)
Query: 343 AEVLGKGSYGT---AYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPL 399
+ LG+G+YG A V EE+ + ++++ + ++ H NVV
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI-CINKMLNHENVVKF 69
Query: 400 RAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMG 459
+ + + L +Y + G L + + G + GV ++H +G
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-----RFFHQLMAGVVYLHGIG 124
Query: 460 GPKFTHGNIKASNVLINQDLDGCISDFGLTPLM---NVPATPSRSAG---YRAPEVIETR 513
TH +IK N+L+++ + ISDFGL + N ++ G Y APE+++ R
Sbjct: 125 ---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 514 K-HSHKSDVYSFGVLLLEMLTGKAPLQSPT 542
+ H+ DV+S G++L ML G+ P P+
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPS 211
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 94/210 (44%), Gaps = 19/210 (9%)
Query: 343 AEVLGKGSYGT---AYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPL 399
+ LG+G+YG A V EE+ + ++++ + ++ H NVV
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI-CINKMLNHENVVKF 69
Query: 400 RAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMG 459
+ + + L +Y + G L + + G + GV ++H +G
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-----RFFHQLMAGVVYLHGIG 124
Query: 460 GPKFTHGNIKASNVLINQDLDGCISDFGLTPLM---NVPATPSRSAG---YRAPEVIETR 513
TH +IK N+L+++ + ISDFGL + N ++ G Y APE+++ R
Sbjct: 125 ---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 514 K-HSHKSDVYSFGVLLLEMLTGKAPLQSPT 542
+ H+ DV+S G++L ML G+ P P+
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPS 211
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 94/210 (44%), Gaps = 19/210 (9%)
Query: 343 AEVLGKGSYGT---AYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPL 399
+ LG+G+YG A V EE+ + ++++ + ++ H NVV
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI-CINKMLNHENVVKF 70
Query: 400 RAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMG 459
+ + + L +Y + G L + + G + GV ++H +G
Sbjct: 71 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-----RFFHQLMAGVVYLHGIG 125
Query: 460 GPKFTHGNIKASNVLINQDLDGCISDFGLTPLM---NVPATPSRSAG---YRAPEVIETR 513
TH +IK N+L+++ + ISDFGL + N ++ G Y APE+++ R
Sbjct: 126 ---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 514 K-HSHKSDVYSFGVLLLEMLTGKAPLQSPT 542
+ H+ DV+S G++L ML G+ P P+
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPS 212
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 107/258 (41%), Gaps = 51/258 (19%)
Query: 296 GKASSGGRSE--KPKEEFGSGVQEPEKNKLVFFEGCSYNFDLEDLLRASAEVLGKGSYGT 353
G S+ G E +PKE G GV + C + ++ +V G GS+
Sbjct: 8 GSHSTHGFYENYEPKEILGRGVSSVVRR-------CIHKPTCKEYAVKIIDVTGGGSFSA 60
Query: 354 AYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVY 413
L E+T ++++I+ +V HPN++ L+ Y + LV+
Sbjct: 61 EEVQELREATL-----------------KEVDILRKVSGHPNIIQLKDTYETNTFFFLVF 103
Query: 414 DYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNV 473
D G L L T + ETR KI+ + +H + H ++K N+
Sbjct: 104 DLMKKGELFDYL----TEKVTLSEKETR-KIMRALLEVICALHKLN---IVHRDLKPENI 155
Query: 474 LINQDLDGCISDFGLT-------PLMNVPATPSRSAGYRAPEVIETRK------HSHKSD 520
L++ D++ ++DFG + L V TPS Y APE+IE + + D
Sbjct: 156 LLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPS----YLAPEIIECSMNDNHPGYGKEVD 211
Query: 521 VYSFGVLLLEMLTGKAPL 538
++S GV++ +L G P
Sbjct: 212 MWSTGVIMYTLLAGSPPF 229
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 94/210 (44%), Gaps = 19/210 (9%)
Query: 343 AEVLGKGSYGT---AYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPL 399
+ LG+G+YG A V EE+ + ++++ + ++ H NVV
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI-CINKMLNHENVVKF 69
Query: 400 RAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMG 459
+ + + L +Y + G L + + G + GV ++H +G
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-----RFFHQLMAGVVYLHGIG 124
Query: 460 GPKFTHGNIKASNVLINQDLDGCISDFGLTPLM---NVPATPSRSAG---YRAPEVIETR 513
TH +IK N+L+++ + ISDFGL + N ++ G Y APE+++ R
Sbjct: 125 ---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 514 K-HSHKSDVYSFGVLLLEMLTGKAPLQSPT 542
+ H+ DV+S G++L ML G+ P P+
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPS 211
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 122/279 (43%), Gaps = 33/279 (11%)
Query: 346 LGKGSYGTAYKAVLEE-STTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAYYY 404
LG G +G Y+ V ++ S T +F ++ ++ + +HPN+V L
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHPNLVQLLGVCT 77
Query: 405 SKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAH-IHSMGGPKF 463
+ ++ ++ G+L L R R E +LL A ++ + + F
Sbjct: 78 REPPFYIITEFMTYGNLLDYL---RECNRQ----EVSAVVLLYMATQISSAMEYLEKKNF 130
Query: 464 THGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG-----YRAPEVIETRKHSHK 518
H ++ A N L+ ++ ++DFGL+ LM + + + APE + K S K
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIK 190
Query: 519 SDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNIE 577
SDV++FGVLL E+ T G +P P D P V ++ + D + R +
Sbjct: 191 SDVWAFGVLLWEIATYGMSPY--PGID-----PSQVYELLEK-------DYRMERPEGCP 236
Query: 578 EEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDS 616
E++ ++++ AC P RP+ E+ + E + Q S
Sbjct: 237 EKVYELMR---ACWQWNPSDRPSFAEIHQAFETMFQESS 272
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 96/213 (45%), Gaps = 35/213 (16%)
Query: 344 EVLGKGSYGTAYKAVLE-ESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAY 402
E +GKG YG ++ + E+ R+ E ++ R H N++ A
Sbjct: 14 ECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLR---HENILGFIAS 70
Query: 403 ----YYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIH-- 456
+S + L+ Y GSL L T LD + ++I+L A G+AH+H
Sbjct: 71 DMTSRHSSTQLWLITHYHEMGSLYDYLQ------LTTLDTVSCLRIVLSIASGLAHLHIE 124
Query: 457 ---SMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG---------Y 504
+ G P H ++K+ N+L+ ++ CI+D GL +M+ +T G Y
Sbjct: 125 IFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDVGNNPRVGTKRY 183
Query: 505 RAPEVIETRKH-----SHKS-DVYSFGVLLLEM 531
APEV++ S+K D+++FG++L E+
Sbjct: 184 MAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 94/213 (44%), Gaps = 35/213 (16%)
Query: 344 EVLGKGSYGTAYKAVLE-ESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAY 402
E +GKG YG ++ + E+ R+ E ++ R H N++ A
Sbjct: 43 ECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLR---HENILGFIAS 99
Query: 403 ----YYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIH-- 456
+S + L+ Y GSL L T LD + ++I+L A G+AH+H
Sbjct: 100 DMTSRHSSTQLWLITHYHEMGSLYDYLQ------LTTLDTVSCLRIVLSIASGLAHLHIE 153
Query: 457 ---SMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG---------Y 504
+ G P H ++K+ N+L+ ++ CI+D GL +M+ +T G Y
Sbjct: 154 IFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGL-AVMHSQSTNQLDVGNNPRVGTKRY 212
Query: 505 RAPEV------IETRKHSHKSDVYSFGVLLLEM 531
APEV ++ + D+++FG++L E+
Sbjct: 213 MAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 94/210 (44%), Gaps = 19/210 (9%)
Query: 343 AEVLGKGSYGT---AYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPL 399
+ LG+G+YG A V EE+ + ++++ + ++ H NVV
Sbjct: 10 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI-CINKMLNHENVVKF 68
Query: 400 RAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMG 459
+ + + L +Y + G L + + G + GV ++H +G
Sbjct: 69 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-----RFFHQLMAGVVYLHGIG 123
Query: 460 GPKFTHGNIKASNVLINQDLDGCISDFGLTPLM---NVPATPSRSAG---YRAPEVIETR 513
TH +IK N+L+++ + ISDFGL + N ++ G Y APE+++ R
Sbjct: 124 ---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 180
Query: 514 K-HSHKSDVYSFGVLLLEMLTGKAPLQSPT 542
+ H+ DV+S G++L ML G+ P P+
Sbjct: 181 EFHAEPVDVWSCGIVLTAMLAGELPWDQPS 210
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 96/213 (45%), Gaps = 35/213 (16%)
Query: 344 EVLGKGSYGTAYKAVLE-ESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAY 402
E +GKG YG ++ + E+ R+ E ++ R H N++ A
Sbjct: 14 ECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLR---HENILGFIAS 70
Query: 403 ----YYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIH-- 456
+S + L+ Y GSL L T LD + ++I+L A G+AH+H
Sbjct: 71 DMTSRHSSTQLWLITHYHEMGSLYDYLQ------LTTLDTVSCLRIVLSIASGLAHLHIE 124
Query: 457 ---SMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG---------Y 504
+ G P H ++K+ N+L+ ++ CI+D GL +M+ +T G Y
Sbjct: 125 IFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDVGNNPRVGTKRY 183
Query: 505 RAPEVIETRKH-----SHKS-DVYSFGVLLLEM 531
APEV++ S+K D+++FG++L E+
Sbjct: 184 MAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 94/210 (44%), Gaps = 19/210 (9%)
Query: 343 AEVLGKGSYGT---AYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPL 399
+ LG+G+YG A V EE+ + ++++ I ++ H NVV
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXI-NKMLNHENVVKF 70
Query: 400 RAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMG 459
+ + + L +Y + G L + + G + GV ++H +G
Sbjct: 71 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-----RFFHQLMAGVVYLHGIG 125
Query: 460 GPKFTHGNIKASNVLINQDLDGCISDFGLTPLM---NVPATPSRSAG---YRAPEVIETR 513
TH +IK N+L+++ + ISDFGL + N ++ G Y APE+++ R
Sbjct: 126 ---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 182
Query: 514 K-HSHKSDVYSFGVLLLEMLTGKAPLQSPT 542
+ H+ DV+S G++L ML G+ P P+
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPS 212
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 94/210 (44%), Gaps = 19/210 (9%)
Query: 343 AEVLGKGSYGT---AYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPL 399
+ LG+G+YG A V EE+ + ++++ I ++ H NVV
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXI-NKMLNHENVVKF 69
Query: 400 RAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMG 459
+ + + L +Y + G L + + G + GV ++H +G
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-----RFFHQLMAGVVYLHGIG 124
Query: 460 GPKFTHGNIKASNVLINQDLDGCISDFGLTPLM---NVPATPSRSAG---YRAPEVIETR 513
TH +IK N+L+++ + ISDFGL + N ++ G Y APE+++ R
Sbjct: 125 ---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 181
Query: 514 K-HSHKSDVYSFGVLLLEMLTGKAPLQSPT 542
+ H+ DV+S G++L ML G+ P P+
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPS 211
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 94/210 (44%), Gaps = 19/210 (9%)
Query: 343 AEVLGKGSYGT---AYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPL 399
+ LG+G+YG A V EE+ + ++++ + ++ H NVV
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI-CINKMLNHENVVKF 70
Query: 400 RAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMG 459
+ + + L +Y + G L + + G + GV ++H +G
Sbjct: 71 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-----RFFHQLMAGVVYLHGIG 125
Query: 460 GPKFTHGNIKASNVLINQDLDGCISDFGLTPLM---NVPATPSRSAG---YRAPEVIETR 513
TH +IK N+L+++ + ISDFGL + N ++ G Y APE+++ R
Sbjct: 126 ---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 514 K-HSHKSDVYSFGVLLLEMLTGKAPLQSPT 542
+ H+ DV+S G++L ML G+ P P+
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPS 212
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 94/210 (44%), Gaps = 19/210 (9%)
Query: 343 AEVLGKGSYGT---AYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPL 399
+ LG+G+YG A V EE+ + ++++ + ++ H NVV
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI-CINKMLNHENVVKF 70
Query: 400 RAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMG 459
+ + + L +Y + G L + + G + GV ++H +G
Sbjct: 71 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-----RFFHQLMAGVVYLHGIG 125
Query: 460 GPKFTHGNIKASNVLINQDLDGCISDFGLTPLM---NVPATPSRSAG---YRAPEVIETR 513
TH +IK N+L+++ + ISDFGL + N ++ G Y APE+++ R
Sbjct: 126 ---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 514 K-HSHKSDVYSFGVLLLEMLTGKAPLQSPT 542
+ H+ DV+S G++L ML G+ P P+
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPS 212
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 94/210 (44%), Gaps = 19/210 (9%)
Query: 343 AEVLGKGSYGT---AYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPL 399
+ LG+G+YG A V EE+ + ++++ + ++ H NVV
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI-CINKMLNHENVVKF 70
Query: 400 RAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMG 459
+ + + L +Y + G L + + G + GV ++H +G
Sbjct: 71 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-----RFFHQLMAGVVYLHGIG 125
Query: 460 GPKFTHGNIKASNVLINQDLDGCISDFGLTPLM---NVPATPSRSAG---YRAPEVIETR 513
TH +IK N+L+++ + ISDFGL + N ++ G Y APE+++ R
Sbjct: 126 ---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 514 K-HSHKSDVYSFGVLLLEMLTGKAPLQSPT 542
+ H+ DV+S G++L ML G+ P P+
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPS 212
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 88/204 (43%), Gaps = 18/204 (8%)
Query: 346 LGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQH-----PNVVPLR 400
LGKG + Y+ + + T Q+ ++ + H P+VV
Sbjct: 34 LGKGGFAKCYE-ITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFH 92
Query: 401 AYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGG 460
++ D +V + SL L H R A P E R + T +GV ++H+
Sbjct: 93 GFFEDDDFVYVVLEICRRRSLLEL-HKRRKAVTEP---EARY-FMRQTIQGVQYLHNN-- 145
Query: 461 PKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR----SAGYRAPEVIETRKHS 516
+ H ++K N+ +N D+D I DFGL + + + Y APEV+ + HS
Sbjct: 146 -RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHS 204
Query: 517 HKSDVYSFGVLLLEMLTGKAPLQS 540
+ D++S G +L +L GK P ++
Sbjct: 205 FEVDIWSLGCILYTLLVGKPPFET 228
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 94/210 (44%), Gaps = 19/210 (9%)
Query: 343 AEVLGKGSYGT---AYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPL 399
+ LG+G+YG A V EE+ + ++++ + ++ H NVV
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI-CINKMLNHENVVKF 69
Query: 400 RAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMG 459
+ + + L +Y + G L + + G + GV ++H +G
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-----RFFHQLMAGVVYLHGIG 124
Query: 460 GPKFTHGNIKASNVLINQDLDGCISDFGLTPLM---NVPATPSRSAG---YRAPEVIETR 513
TH +IK N+L+++ + ISDFGL + N ++ G Y APE+++ R
Sbjct: 125 ---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 514 K-HSHKSDVYSFGVLLLEMLTGKAPLQSPT 542
+ H+ DV+S G++L ML G+ P P+
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPS 211
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 94/210 (44%), Gaps = 19/210 (9%)
Query: 343 AEVLGKGSYGT---AYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPL 399
+ LG+G+YG A V EE+ + ++++ + ++ H NVV
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI-CINKMLNHENVVKF 70
Query: 400 RAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMG 459
+ + + L +Y + G L + + G + GV ++H +G
Sbjct: 71 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-----RFFHQLMAGVVYLHGIG 125
Query: 460 GPKFTHGNIKASNVLINQDLDGCISDFGLTPLM---NVPATPSRSAG---YRAPEVIETR 513
TH +IK N+L+++ + ISDFGL + N ++ G Y APE+++ R
Sbjct: 126 ---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 514 K-HSHKSDVYSFGVLLLEMLTGKAPLQSPT 542
+ H+ DV+S G++L ML G+ P P+
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPS 212
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 94/210 (44%), Gaps = 19/210 (9%)
Query: 343 AEVLGKGSYGT---AYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPL 399
+ LG+G+YG A V EE+ + ++++ + ++ H NVV
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI-CINKMLNHENVVKF 69
Query: 400 RAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMG 459
+ + + L +Y + G L + + G + GV ++H +G
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-----RFFHQLMAGVVYLHGIG 124
Query: 460 GPKFTHGNIKASNVLINQDLDGCISDFGLTPLM---NVPATPSRSAG---YRAPEVIETR 513
TH +IK N+L+++ + ISDFGL + N ++ G Y APE+++ R
Sbjct: 125 ---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 181
Query: 514 K-HSHKSDVYSFGVLLLEMLTGKAPLQSPT 542
+ H+ DV+S G++L ML G+ P P+
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPS 211
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 95/216 (43%), Gaps = 22/216 (10%)
Query: 393 HPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGV 452
HPNV+ A + +E +V + +G LS ++ + R + T K + +
Sbjct: 91 HPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRL-IPERTVWKYFVQLCSAL 149
Query: 453 AHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRS----AGYRAPE 508
H+HS + H +IK +NV I + D GL + T + S Y +PE
Sbjct: 150 EHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPE 206
Query: 509 VIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDV 568
I ++ KSD++S G LL EM A LQSP D ++L + + E D
Sbjct: 207 RIHENGYNFKSDIWSLGCLLYEM----AALQSPFYGDKMNLYSLCKKI-------EQCDY 255
Query: 569 ELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEV 604
+ + EE+ Q++ + C+ P+ RP++ V
Sbjct: 256 PPLPSDHYSEELRQLVNM---CINPDPEKRPDVTYV 288
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 94/210 (44%), Gaps = 19/210 (9%)
Query: 343 AEVLGKGSYGT---AYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPL 399
+ LG+G+YG A V EE+ + ++++ + ++ H NVV
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI-CINKMLNHENVVKF 69
Query: 400 RAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMG 459
+ + + L +Y + G L + + G + GV ++H +G
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-----RFFHQLMAGVVYLHGIG 124
Query: 460 GPKFTHGNIKASNVLINQDLDGCISDFGLTPLM---NVPATPSRSAG---YRAPEVIETR 513
TH +IK N+L+++ + ISDFGL + N ++ G Y APE+++ R
Sbjct: 125 ---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 181
Query: 514 K-HSHKSDVYSFGVLLLEMLTGKAPLQSPT 542
+ H+ DV+S G++L ML G+ P P+
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPS 211
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 106/226 (46%), Gaps = 27/226 (11%)
Query: 326 FEGCSYNFDLEDLLRASAEVLGK-GSYGTAYKAVLEESTTXXXXXX--XXXXXXXRDFEQ 382
+E + + + ED E++G+ G +G YKA +E++ D+
Sbjct: 1 YEHVTRDLNPEDFW----EIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMV 56
Query: 383 QMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSL-STLLHGNRGAGRTPLDWETR 441
+++I+ HPN+V L +Y ++ ++ ++ A G++ + +L R PL T
Sbjct: 57 EIDILASC-DHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELER-----PL---TE 107
Query: 442 VKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRS 501
+I + + + ++ + K H ++KA N+L D D ++DFG++ R
Sbjct: 108 SQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRD 167
Query: 502 A-----GYRAPEVI-----ETRKHSHKSDVYSFGVLLLEMLTGKAP 537
+ + APEV+ + R + +K+DV+S G+ L+EM + P
Sbjct: 168 SFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 213
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 88/204 (43%), Gaps = 18/204 (8%)
Query: 346 LGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQH-----PNVVPLR 400
LGKG + Y+ + + T Q+ ++ + H P+VV
Sbjct: 50 LGKGGFAKCYE-ITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFH 108
Query: 401 AYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGG 460
++ D +V + SL L H R A P E R + T +GV ++H+
Sbjct: 109 GFFEDDDFVYVVLEICRRRSLLEL-HKRRKAVTEP---EARY-FMRQTIQGVQYLHNN-- 161
Query: 461 PKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR----SAGYRAPEVIETRKHS 516
+ H ++K N+ +N D+D I DFGL + + + Y APEV+ + HS
Sbjct: 162 -RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHS 220
Query: 517 HKSDVYSFGVLLLEMLTGKAPLQS 540
+ D++S G +L +L GK P ++
Sbjct: 221 FEVDIWSLGCILYTLLVGKPPFET 244
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 94/210 (44%), Gaps = 19/210 (9%)
Query: 343 AEVLGKGSYGT---AYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPL 399
+ LG+G+YG A V EE+ + ++++ + ++ H NVV
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI-CINKMLNHENVVKF 69
Query: 400 RAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMG 459
+ + + L +Y + G L + + G + GV ++H +G
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-----RFFHQLMAGVVYLHGIG 124
Query: 460 GPKFTHGNIKASNVLINQDLDGCISDFGLTPLM---NVPATPSRSAG---YRAPEVIETR 513
TH +IK N+L+++ + ISDFGL + N ++ G Y APE+++ R
Sbjct: 125 ---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 181
Query: 514 K-HSHKSDVYSFGVLLLEMLTGKAPLQSPT 542
+ H+ DV+S G++L ML G+ P P+
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPS 211
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 101/216 (46%), Gaps = 24/216 (11%)
Query: 332 NFDLEDLLRASAEVLGKGSYGTAYKAV---LEESTTXXXXXXXXXXXXXRDFEQQMEIVG 388
+ D E+L E +GKGS+G +K + ++ D +Q++ ++
Sbjct: 2 SLDPEELF-TKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLS 60
Query: 389 RVGQHPNVVPLRAYY--YSKDEKL-LVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKIL 445
+ P V YY Y KD KL ++ +Y GS LL PLD IL
Sbjct: 61 QCDS-PYVT---KYYGSYLKDTKLWIIMEYLGGGSALDLLEPG------PLDETQIATIL 110
Query: 446 LGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLT-PLMNVPATPSRSAG- 503
+G+ ++HS K H +IKA+NVL+++ + ++DFG+ L + + G
Sbjct: 111 REILKGLDYLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGT 167
Query: 504 --YRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAP 537
+ APEVI+ + K+D++S G+ +E+ G+ P
Sbjct: 168 PFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 203
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 102/246 (41%), Gaps = 49/246 (19%)
Query: 306 KPKEEFGSGVQEPEKNKLVFFEGCSYNFDLEDLLRASAEVLGKGSYGTAYKAVLEESTTX 365
+PKE G GV + C + ++ +V G GS+ L E+T
Sbjct: 7 EPKEILGRGVSSVVRR-------CIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATL- 58
Query: 366 XXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLL 425
++++I+ +V HPN++ L+ Y + LV+D G L L
Sbjct: 59 ----------------KEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL 102
Query: 426 HGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISD 485
T + ETR KI+ + +H + H ++K N+L++ D++ ++D
Sbjct: 103 ----TEKVTLSEKETR-KIMRALLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTD 154
Query: 486 FGLT-------PLMNVPATPSRSAGYRAPEVIETRK------HSHKSDVYSFGVLLLEML 532
FG + L V TPS Y APE+IE + + D++S GV++ +L
Sbjct: 155 FGFSCQLDPGEKLREVCGTPS----YLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLL 210
Query: 533 TGKAPL 538
G P
Sbjct: 211 AGSPPF 216
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 88/204 (43%), Gaps = 18/204 (8%)
Query: 346 LGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQH-----PNVVPLR 400
LGKG + Y+ + + T Q+ ++ + H P+VV
Sbjct: 50 LGKGGFAKCYE-ITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFH 108
Query: 401 AYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGG 460
++ D +V + SL L H R A P E R + T +GV ++H+
Sbjct: 109 GFFEDDDFVYVVLEICRRRSLLEL-HKRRKAVTEP---EARY-FMRQTIQGVQYLHNN-- 161
Query: 461 PKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR----SAGYRAPEVIETRKHS 516
+ H ++K N+ +N D+D I DFGL + + + Y APEV+ + HS
Sbjct: 162 -RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLCKKGHS 220
Query: 517 HKSDVYSFGVLLLEMLTGKAPLQS 540
+ D++S G +L +L GK P ++
Sbjct: 221 FEVDIWSLGCILYTLLVGKPPFET 244
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 88/204 (43%), Gaps = 18/204 (8%)
Query: 346 LGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQH-----PNVVPLR 400
LGKG + Y+ + + T Q+ ++ + H P+VV
Sbjct: 50 LGKGGFAKCYE-ITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFH 108
Query: 401 AYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGG 460
++ D +V + SL L H R A P E R + T +GV ++H+
Sbjct: 109 GFFEDDDFVYVVLEICRRRSLLEL-HKRRKAVTEP---EARY-FMRQTIQGVQYLHNN-- 161
Query: 461 PKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRS----AGYRAPEVIETRKHS 516
+ H ++K N+ +N D+D I DFGL + ++ Y APEV+ + HS
Sbjct: 162 -RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLCKKGHS 220
Query: 517 HKSDVYSFGVLLLEMLTGKAPLQS 540
+ D++S G +L +L GK P ++
Sbjct: 221 FEVDIWSLGCILYTLLVGKPPFET 244
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 101/216 (46%), Gaps = 24/216 (11%)
Query: 332 NFDLEDLLRASAEVLGKGSYGTAYKAV---LEESTTXXXXXXXXXXXXXRDFEQQMEIVG 388
+ D E+L E +GKGS+G +K + ++ D +Q++ ++
Sbjct: 2 SLDPEELF-TKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLS 60
Query: 389 RVGQHPNVVPLRAYY--YSKDEKL-LVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKIL 445
+ P V YY Y KD KL ++ +Y GS LL PLD IL
Sbjct: 61 QCDS-PYVT---KYYGSYLKDTKLWIIMEYLGGGSALDLLEPG------PLDETQIATIL 110
Query: 446 LGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLT-PLMNVPATPSRSAG- 503
+G+ ++HS K H +IKA+NVL+++ + ++DFG+ L + + G
Sbjct: 111 REILKGLDYLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGT 167
Query: 504 --YRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAP 537
+ APEVI+ + K+D++S G+ +E+ G+ P
Sbjct: 168 PFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 203
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 82/180 (45%), Gaps = 24/180 (13%)
Query: 378 RDFEQQMEIVGRVGQHPNVVPLRAYYY----SKDEKLLVYDYFASGSLSTLLHGNRGAGR 433
R+ Q+ + R+ HPN++ L AY +K E L+ +F G+L + + G
Sbjct: 70 REEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGN 129
Query: 434 TPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN 493
L + + +LLG RG+ IH+ G + H ++K +N+L+ + + D G
Sbjct: 130 F-LTEDQILWLLLGICRGLEAIHAKG---YAHRDLKPTNILLGDEGQPVLMDLGSMNQAC 185
Query: 494 VPATPSRSA-------------GYRAPEVIETRKH---SHKSDVYSFGVLLLEMLTGKAP 537
+ SR A YRAPE+ + H ++DV+S G +L M+ G+ P
Sbjct: 186 IHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGP 245
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 101/216 (46%), Gaps = 24/216 (11%)
Query: 332 NFDLEDLLRASAEVLGKGSYGTAYKAV---LEESTTXXXXXXXXXXXXXRDFEQQMEIVG 388
+ D E+L E +GKGS+G +K + ++ D +Q++ ++
Sbjct: 22 SMDPEELF-TKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLS 80
Query: 389 RVGQHPNVVPLRAYY--YSKDEKL-LVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKIL 445
+ P V YY Y KD KL ++ +Y GS LL PLD IL
Sbjct: 81 QC-DSPYVT---KYYGSYLKDTKLWIIMEYLGGGSALDLLEPG------PLDETQIATIL 130
Query: 446 LGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLT-PLMNVPATPSRSAG- 503
+G+ ++HS K H +IKA+NVL+++ + ++DFG+ L + + G
Sbjct: 131 REILKGLDYLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGT 187
Query: 504 --YRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAP 537
+ APEVI+ + K+D++S G+ +E+ G+ P
Sbjct: 188 PFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 223
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 94/203 (46%), Gaps = 18/203 (8%)
Query: 344 EVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXX---RDFEQQMEIVGRVGQHPNVVPLR 400
E +G+G+YG YKA T +++ I+ + +H N+V L
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKEL-KHSNIVKLY 66
Query: 401 AYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGG 460
++K +LV+++ L LL G L+ T LL G+A+ H
Sbjct: 67 DVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGG----LESVTAKSFLLQLLNGIAYCHDR-- 119
Query: 461 PKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR----SAGYRAPEVIE-TRKH 515
+ H ++K N+LIN++ + I+DFGL +P + YRAP+V+ ++K+
Sbjct: 120 -RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKY 178
Query: 516 SHKSDVYSFGVLLLEMLTGKAPL 538
S D++S G + EM+ G APL
Sbjct: 179 STTIDIWSVGCIFAEMVNG-APL 200
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 96/204 (47%), Gaps = 23/204 (11%)
Query: 344 EVLGKGSYGTAYKAV---LEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLR 400
E +GKGS+G +K + ++ D +Q++ ++ + P V
Sbjct: 28 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDS-PYVT--- 83
Query: 401 AYY--YSKDEKL-LVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHS 457
YY Y KD KL ++ +Y GS LL PLD IL +G+ ++HS
Sbjct: 84 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPG------PLDETQIATILREILKGLDYLHS 137
Query: 458 MGGPKFTHGNIKASNVLINQDLDGCISDFGLT-PLMNVPATPSRSAG---YRAPEVIETR 513
K H +IKA+NVL+++ + ++DFG+ L + + G + APEVI+
Sbjct: 138 ---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQS 194
Query: 514 KHSHKSDVYSFGVLLLEMLTGKAP 537
+ K+D++S G+ +E+ G+ P
Sbjct: 195 AYDSKADIWSLGITAIELARGEPP 218
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 93/210 (44%), Gaps = 19/210 (9%)
Query: 343 AEVLGKGSYGT---AYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPL 399
+ LG+G+YG A V EE+ + ++++ + + H NVV
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI-CINAMLNHENVVKF 70
Query: 400 RAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMG 459
+ + + L +Y + G L + + G + GV ++H +G
Sbjct: 71 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-----RFFHQLMAGVVYLHGIG 125
Query: 460 GPKFTHGNIKASNVLINQDLDGCISDFGLTPLM---NVPATPSRSAG---YRAPEVIETR 513
TH +IK N+L+++ + ISDFGL + N ++ G Y APE+++ R
Sbjct: 126 ---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 514 K-HSHKSDVYSFGVLLLEMLTGKAPLQSPT 542
+ H+ DV+S G++L ML G+ P P+
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPS 212
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 78/157 (49%), Gaps = 15/157 (9%)
Query: 386 IVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKIL 445
++ R QH NVV + Y DE +V ++ G+L+ ++ R ++ E +
Sbjct: 78 VIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR------MNEEQIAAVC 131
Query: 446 LGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR----- 500
L + ++ +H+ G H +IK+ ++L+ D +SDFG ++ P R
Sbjct: 132 LAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVS-KEVPRRKXLVG 187
Query: 501 SAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAP 537
+ + APE+I + + D++S G++++EM+ G+ P
Sbjct: 188 TPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 224
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 78/157 (49%), Gaps = 15/157 (9%)
Query: 386 IVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKIL 445
++ R QH NVV + Y DE +V ++ G+L+ ++ R ++ E +
Sbjct: 80 VIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR------MNEEQIAAVC 133
Query: 446 LGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR----- 500
L + ++ +H+ G H +IK+ ++L+ D +SDFG ++ P R
Sbjct: 134 LAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVS-KEVPRRKXLVG 189
Query: 501 SAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAP 537
+ + APE+I + + D++S G++++EM+ G+ P
Sbjct: 190 TPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 226
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 78/157 (49%), Gaps = 15/157 (9%)
Query: 386 IVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKIL 445
++ R QH NVV + Y DE +V ++ G+L+ ++ R ++ E +
Sbjct: 200 VIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR------MNEEQIAAVC 253
Query: 446 LGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR----- 500
L + ++ +H+ G H +IK+ ++L+ D +SDFG ++ P R
Sbjct: 254 LAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVS-KEVPRRKXLVG 309
Query: 501 SAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAP 537
+ + APE+I + + D++S G++++EM+ G+ P
Sbjct: 310 TPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 346
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 93/216 (43%), Gaps = 41/216 (18%)
Query: 344 EVLGKGSYGTAYKAVLE-ESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAY 402
E +GKG +G ++ E R+ E ++ R H N++
Sbjct: 12 ESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLR---HENILG---- 64
Query: 403 YYSKDEK--------LLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAH 454
+ + D K LV DY GSL L+ R + E +K+ L TA G+AH
Sbjct: 65 FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN------RYTVTVEGMIKLALSTASGLAH 118
Query: 455 IH-----SMGGPKFTHGNIKASNVLINQDLDGCISDFGL-----TPLMNVPATPSRSAG- 503
+H + G P H ++K+ N+L+ ++ CI+D GL + + P+ G
Sbjct: 119 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGT 178
Query: 504 --YRAPEVIE---TRKHSH---KSDVYSFGVLLLEM 531
Y APEV++ KH ++D+Y+ G++ E+
Sbjct: 179 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 93/216 (43%), Gaps = 41/216 (18%)
Query: 344 EVLGKGSYGTAYKAVLE-ESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAY 402
E +GKG +G ++ E R+ E ++ R H N++
Sbjct: 9 ESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLR---HENILG---- 61
Query: 403 YYSKDEK--------LLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAH 454
+ + D K LV DY GSL L+ R + E +K+ L TA G+AH
Sbjct: 62 FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN------RYTVTVEGMIKLALSTASGLAH 115
Query: 455 IH-----SMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN-----VPATPSRSAG- 503
+H + G P H ++K+ N+L+ ++ CI+D GL + + P+ G
Sbjct: 116 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGT 175
Query: 504 --YRAPEVIE---TRKHSH---KSDVYSFGVLLLEM 531
Y APEV++ KH ++D+Y+ G++ E+
Sbjct: 176 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 94/207 (45%), Gaps = 17/207 (8%)
Query: 345 VLGKGSYGTAYKAV-----LEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPL 399
+LGKGS+ Y+A LE + + + +++I ++ +HP+++ L
Sbjct: 18 LLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQL-KHPSILEL 76
Query: 400 RAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMG 459
Y+ + LV + +G ++ L NR P + G+ ++HS G
Sbjct: 77 YNYFEDSNYVYLVLEMCHNGEMNRYL-KNR---VKPFSENEARHFMHQIITGMLYLHSHG 132
Query: 460 GPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA----TPSRSAGYRAPEVIETRKH 515
H ++ SN+L+ ++++ I+DFGL + +P T + Y +PE+ H
Sbjct: 133 ---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAH 189
Query: 516 SHKSDVYSFGVLLLEMLTGKAPLQSPT 542
+SDV+S G + +L G+ P + T
Sbjct: 190 GLESDVWSLGCMFYTLLIGRPPFDTDT 216
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 78/157 (49%), Gaps = 15/157 (9%)
Query: 386 IVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKIL 445
++ R QH NVV + Y DE +V ++ G+L+ ++ R ++ E +
Sbjct: 69 VIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR------MNEEQIAAVC 122
Query: 446 LGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR----- 500
L + ++ +H+ G H +IK+ ++L+ D +SDFG ++ P R
Sbjct: 123 LAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVS-KEVPRRKXLVG 178
Query: 501 SAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAP 537
+ + APE+I + + D++S G++++EM+ G+ P
Sbjct: 179 TPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 215
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 86/183 (46%), Gaps = 30/183 (16%)
Query: 379 DFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDW 438
D E+++ I+ + QHPNV+ L Y +K + +L+ + A G L L A + L
Sbjct: 60 DIEREVSILKEI-QHPNVITLHEVYENKTDVILILELVAGGELFDFL-----AEKESLTE 113
Query: 439 ETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGC-------ISDFGLT-- 489
E + L GV ++HS+ + H ++K N+++ LD I DFGL
Sbjct: 114 EEATEFLKQILNGVYYLHSL---QIAHFDLKPENIML---LDRNVPKPRIKIIDFGLAHK 167
Query: 490 -----PLMNVPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRD 544
N+ TP+ + APE++ ++D++S GV+ +L+G +P T+
Sbjct: 168 IDFGNEFKNIFGTPA----FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ 223
Query: 545 DMV 547
+ +
Sbjct: 224 ETL 226
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 93/216 (43%), Gaps = 41/216 (18%)
Query: 344 EVLGKGSYGTAYKAVLE-ESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAY 402
E +GKG +G ++ E R+ E ++ R H N++
Sbjct: 10 ESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLR---HENILG---- 62
Query: 403 YYSKDEK--------LLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAH 454
+ + D K LV DY GSL L+ R + E +K+ L TA G+AH
Sbjct: 63 FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN------RYTVTVEGMIKLALSTASGLAH 116
Query: 455 IH-----SMGGPKFTHGNIKASNVLINQDLDGCISDFGL-----TPLMNVPATPSRSAG- 503
+H + G P H ++K+ N+L+ ++ CI+D GL + + P+ G
Sbjct: 117 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGT 176
Query: 504 --YRAPEVIE---TRKHSH---KSDVYSFGVLLLEM 531
Y APEV++ KH ++D+Y+ G++ E+
Sbjct: 177 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 93/216 (43%), Gaps = 41/216 (18%)
Query: 344 EVLGKGSYGTAYKAVLE-ESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAY 402
E +GKG +G ++ E R+ E ++ R H N++
Sbjct: 15 ESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLR---HENILG---- 67
Query: 403 YYSKDEK--------LLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAH 454
+ + D K LV DY GSL L+ R + E +K+ L TA G+AH
Sbjct: 68 FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN------RYTVTVEGMIKLALSTASGLAH 121
Query: 455 IH-----SMGGPKFTHGNIKASNVLINQDLDGCISDFGL-----TPLMNVPATPSRSAG- 503
+H + G P H ++K+ N+L+ ++ CI+D GL + + P+ G
Sbjct: 122 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGT 181
Query: 504 --YRAPEVIE---TRKHSH---KSDVYSFGVLLLEM 531
Y APEV++ KH ++D+Y+ G++ E+
Sbjct: 182 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 95/215 (44%), Gaps = 33/215 (15%)
Query: 341 ASAEVLGKGSYGTAYKAVLE-ESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPL 399
A E +GKG YG ++ + ES R+ E ++ R H N++
Sbjct: 11 ALVECVGKGRYGEVWRGLWHGESVAVKIFSSRDEQSWFRETEIYNTVLLR---HDNILGF 67
Query: 400 RAYYY----SKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHI 455
A S + L+ Y GSL L R L+ +++ + A G+AH+
Sbjct: 68 IASDMTSRNSSTQLWLITHYHEHGSLYDFLQ------RQTLEPHLALRLAVSAACGLAHL 121
Query: 456 H-----SMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPL-------MNVPATPSR-SA 502
H + G P H + K+ NVL+ +L CI+D GL + +++ P +
Sbjct: 122 HVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTK 181
Query: 503 GYRAPEVIETRK-----HSHK-SDVYSFGVLLLEM 531
Y APEV++ + S+K +D+++FG++L E+
Sbjct: 182 RYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 109/228 (47%), Gaps = 26/228 (11%)
Query: 394 PNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVA 453
P +V +YS E + ++ GSL +L + AGR P +V I +G+
Sbjct: 83 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSI--AVIKGLT 137
Query: 454 HIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM--NVPATPSRSAGYRAPEVIE 511
++ K H ++K SN+L+N + + DFG++ + ++ + + Y +PE ++
Sbjct: 138 YLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQ 195
Query: 512 TRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRD-DMVDLPRWVQSVVREEWTAEVFDVEL 570
+S +SD++S G+ L+EM G+ P+ S + + +L ++ + + + VF +E
Sbjct: 196 GTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEPPPKLPSGVFSLEF 255
Query: 571 MRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEE-VRQSDSE 617
F N C+ K P R ++ ++ M+ +++SD+E
Sbjct: 256 QDFVN-------------KCLIKNPAERADLKQL--MVHAFIKRSDAE 288
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 85/183 (46%), Gaps = 30/183 (16%)
Query: 379 DFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDW 438
D E+++ I+ + QHPNV+ L Y +K + +L+ + A G L L A + L
Sbjct: 60 DIEREVSILKEI-QHPNVITLHEVYENKTDVILILELVAGGELFDFL-----AEKESLTE 113
Query: 439 ETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGC-------ISDFGLT-- 489
E + L GV ++HS+ + H ++K N+++ LD I DFGL
Sbjct: 114 EEATEFLKQILNGVYYLHSL---QIAHFDLKPENIML---LDRNVPKPRIKIIDFGLAHK 167
Query: 490 -----PLMNVPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRD 544
N+ TP + APE++ ++D++S GV+ +L+G +P T+
Sbjct: 168 IDFGNEFKNIFGTPE----FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ 223
Query: 545 DMV 547
+ +
Sbjct: 224 ETL 226
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 103/248 (41%), Gaps = 34/248 (13%)
Query: 327 EGCSYNFDLEDLLRASAEVLGKGSYGTAYKAVL-------EESTTXXXXXXXXXXXXXRD 379
+ C ++ D++ LG+G++G + A ++ +D
Sbjct: 9 DACVHHIKRRDIVLKWE--LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQD 66
Query: 380 FEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSL----------STLLHGNR 429
F+++ E++ + QH ++V L+V++Y G L + LL G
Sbjct: 67 FQREAELLTML-QHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGE 125
Query: 430 GAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLT 489
PL + + A G+ + + G F H ++ N L+ Q L I DFG++
Sbjct: 126 DVAPGPLGLGQLLAVASQVAAGMVY---LAGLHFVHRDLATRNCLVGQGLVVKIGDFGMS 182
Query: 490 PLMNVPATPSRSAGYRA--------PEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQS 540
++ +T G R PE I RK + +SDV+SFGV+L E+ T GK P
Sbjct: 183 --RDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQ 240
Query: 541 PTRDDMVD 548
+ + +D
Sbjct: 241 LSNTEAID 248
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 93/216 (43%), Gaps = 41/216 (18%)
Query: 344 EVLGKGSYGTAYKAVLE-ESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAY 402
E +GKG +G ++ E R+ E ++ R H N++
Sbjct: 35 ESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLR---HENILG---- 87
Query: 403 YYSKDEK--------LLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAH 454
+ + D K LV DY GSL L+ R + E +K+ L TA G+AH
Sbjct: 88 FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN------RYTVTVEGMIKLALSTASGLAH 141
Query: 455 IH-----SMGGPKFTHGNIKASNVLINQDLDGCISDFGL-----TPLMNVPATPSRSAG- 503
+H + G P H ++K+ N+L+ ++ CI+D GL + + P+ G
Sbjct: 142 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGT 201
Query: 504 --YRAPEVIE---TRKHSH---KSDVYSFGVLLLEM 531
Y APEV++ KH ++D+Y+ G++ E+
Sbjct: 202 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 94/213 (44%), Gaps = 35/213 (16%)
Query: 344 EVLGKGSYGTAYKAVLE-ESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAY 402
E +GKG +G ++ E R+ E ++ R H N++ A
Sbjct: 48 ESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLR---HENILGFIAA 104
Query: 403 YYSKD-----EKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIH- 456
+KD + LV DY GSL L+ R + E +K+ L TA G+AH+H
Sbjct: 105 D-NKDNGTWTQLWLVSDYHEHGSLFDYLN------RYTVTVEGMIKLALSTASGLAHLHM 157
Query: 457 ----SMGGPKFTHGNIKASNVLINQDLDGCISDFGL-----TPLMNVPATPSRSAG---Y 504
+ G P H ++K+ N+L+ ++ CI+D GL + + P+ G Y
Sbjct: 158 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 217
Query: 505 RAPEVIE---TRKHSH---KSDVYSFGVLLLEM 531
APEV++ KH ++D+Y+ G++ E+
Sbjct: 218 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 78/157 (49%), Gaps = 15/157 (9%)
Query: 386 IVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKIL 445
++ R QH NVV + Y DE +V ++ G+L+ ++ R ++ E +
Sbjct: 123 VIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR------MNEEQIAAVC 176
Query: 446 LGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR----- 500
L + ++ +H+ G H +IK+ ++L+ D +SDFG ++ P R
Sbjct: 177 LAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVS-KEVPRRKXLVG 232
Query: 501 SAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAP 537
+ + APE+I + + D++S G++++EM+ G+ P
Sbjct: 233 TPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 269
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 78/157 (49%), Gaps = 15/157 (9%)
Query: 386 IVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKIL 445
++ R QH NVV + Y DE +V ++ G+L+ ++ R ++ E +
Sbjct: 73 VIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR------MNEEQIAAVC 126
Query: 446 LGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR----- 500
L + ++ +H+ G H +IK+ ++L+ D +SDFG ++ P R
Sbjct: 127 LAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVS-KEVPRRKXLVG 182
Query: 501 SAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAP 537
+ + APE+I + + D++S G++++EM+ G+ P
Sbjct: 183 TPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 219
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 85/183 (46%), Gaps = 30/183 (16%)
Query: 379 DFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDW 438
D E+++ I+ + QHPNV+ L Y +K + +L+ + A G L L A + L
Sbjct: 60 DIEREVSILKEI-QHPNVITLHEVYENKTDVILILELVAGGELFDFL-----AEKESLTE 113
Query: 439 ETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGC-------ISDFGLT-- 489
E + L GV ++HS+ + H ++K N+++ LD I DFGL
Sbjct: 114 EEATEFLKQILNGVYYLHSL---QIAHFDLKPENIML---LDRNVPKPRIKIIDFGLAHK 167
Query: 490 -----PLMNVPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRD 544
N+ TP + APE++ ++D++S GV+ +L+G +P T+
Sbjct: 168 IDFGNEFKNIFGTPE----FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ 223
Query: 545 DMV 547
+ +
Sbjct: 224 ETL 226
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 103/248 (41%), Gaps = 34/248 (13%)
Query: 327 EGCSYNFDLEDLLRASAEVLGKGSYGTAYKAVL-------EESTTXXXXXXXXXXXXXRD 379
+ C ++ D++ LG+G++G + A ++ +D
Sbjct: 3 DACVHHIKRRDIVLKWE--LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQD 60
Query: 380 FEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSL----------STLLHGNR 429
F+++ E++ + QH ++V L+V++Y G L + LL G
Sbjct: 61 FQREAELLTML-QHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGE 119
Query: 430 GAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLT 489
PL + + A G+ + + G F H ++ N L+ Q L I DFG++
Sbjct: 120 DVAPGPLGLGQLLAVASQVAAGMVY---LAGLHFVHRDLATRNCLVGQGLVVKIGDFGMS 176
Query: 490 PLMNVPATPSRSAGYRA--------PEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQS 540
++ +T G R PE I RK + +SDV+SFGV+L E+ T GK P
Sbjct: 177 --RDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQ 234
Query: 541 PTRDDMVD 548
+ + +D
Sbjct: 235 LSNTEAID 242
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 114/254 (44%), Gaps = 40/254 (15%)
Query: 378 RDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLL--HG------NR 429
+DF ++ E++ + QH ++V D ++V++Y G L+ L HG
Sbjct: 60 KDFHREAELLTNL-QHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAE 118
Query: 430 GAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLT 489
G T L + I A G+ ++ S F H ++ N L+ ++L I DFG++
Sbjct: 119 GNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKIGDFGMS 175
Query: 490 PLMNVPATPSRSAG--------YRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQS 540
+V +T G + PE I RK + +SDV+S GV+L E+ T GK P
Sbjct: 176 --RDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQ 233
Query: 541 PTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPN 600
+ +++++ Q V L R + +E+ +++ + C + P MR N
Sbjct: 234 LSNNEVIECI--TQGRV------------LQRPRTCPQEVYELM---LGCWQREPHMRKN 276
Query: 601 MDEVVRMIEEVRQS 614
+ + +++ + ++
Sbjct: 277 IKGIHTLLQNLAKA 290
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 85/183 (46%), Gaps = 30/183 (16%)
Query: 379 DFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDW 438
D E+++ I+ + QHPNV+ L Y +K + +L+ + A G L L A + L
Sbjct: 60 DIEREVSILKEI-QHPNVITLHEVYENKTDVILILELVAGGELFDFL-----AEKESLTE 113
Query: 439 ETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGC-------ISDFGLT-- 489
E + L GV ++HS+ + H ++K N+++ LD I DFGL
Sbjct: 114 EEATEFLKQILNGVYYLHSL---QIAHFDLKPENIML---LDRNVPKPRIKIIDFGLAHK 167
Query: 490 -----PLMNVPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRD 544
N+ TP + APE++ ++D++S GV+ +L+G +P T+
Sbjct: 168 IDFGNEFKNIFGTPE----FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ 223
Query: 545 DMV 547
+ +
Sbjct: 224 ETL 226
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 85/183 (46%), Gaps = 30/183 (16%)
Query: 379 DFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDW 438
D E+++ I+ + QHPNV+ L Y +K + +L+ + A G L L A + L
Sbjct: 60 DIEREVSILKEI-QHPNVITLHEVYENKTDVILILELVAGGELFDFL-----AEKESLTE 113
Query: 439 ETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGC-------ISDFGLT-- 489
E + L GV ++HS+ + H ++K N+++ LD I DFGL
Sbjct: 114 EEATEFLKQILNGVYYLHSL---QIAHFDLKPENIML---LDRNVPKPRIKIIDFGLAHK 167
Query: 490 -----PLMNVPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRD 544
N+ TP + APE++ ++D++S GV+ +L+G +P T+
Sbjct: 168 IDFGNEFKNIFGTPE----FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ 223
Query: 545 DMV 547
+ +
Sbjct: 224 ETL 226
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 85/183 (46%), Gaps = 30/183 (16%)
Query: 379 DFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDW 438
D E+++ I+ + QHPNV+ L Y +K + +L+ + A G L L A + L
Sbjct: 60 DIEREVSILKEI-QHPNVITLHEVYENKTDVILILELVAGGELFDFL-----AEKESLTE 113
Query: 439 ETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGC-------ISDFGLT-- 489
E + L GV ++HS+ + H ++K N+++ LD I DFGL
Sbjct: 114 EEATEFLKQILNGVYYLHSL---QIAHFDLKPENIML---LDRNVPKPRIKIIDFGLAHK 167
Query: 490 -----PLMNVPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRD 544
N+ TP + APE++ ++D++S GV+ +L+G +P T+
Sbjct: 168 IDFGNEFKNIFGTPE----FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ 223
Query: 545 DMV 547
+ +
Sbjct: 224 ETL 226
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 85/183 (46%), Gaps = 30/183 (16%)
Query: 379 DFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDW 438
D E+++ I+ + QHPNV+ L Y +K + +L+ + A G L L A + L
Sbjct: 60 DIEREVSILKEI-QHPNVITLHEVYENKTDVILILELVAGGELFDFL-----AEKESLTE 113
Query: 439 ETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGC-------ISDFGLT-- 489
E + L GV ++HS+ + H ++K N+++ LD I DFGL
Sbjct: 114 EEATEFLKQILNGVYYLHSL---QIAHFDLKPENIML---LDRNVPKPRIKIIDFGLAHK 167
Query: 490 -----PLMNVPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRD 544
N+ TP + APE++ ++D++S GV+ +L+G +P T+
Sbjct: 168 IDFGNEFKNIFGTPE----FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ 223
Query: 545 DMV 547
+ +
Sbjct: 224 ETL 226
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 85/183 (46%), Gaps = 30/183 (16%)
Query: 379 DFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDW 438
D E+++ I+ + QHPNV+ L Y +K + +L+ + A G L L A + L
Sbjct: 60 DIEREVSILKEI-QHPNVITLHEVYENKTDVILILELVAGGELFDFL-----AEKESLTE 113
Query: 439 ETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGC-------ISDFGLT-- 489
E + L GV ++HS+ + H ++K N+++ LD I DFGL
Sbjct: 114 EEATEFLKQILNGVYYLHSL---QIAHFDLKPENIML---LDRNVPKPRIKIIDFGLAHK 167
Query: 490 -----PLMNVPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRD 544
N+ TP + APE++ ++D++S GV+ +L+G +P T+
Sbjct: 168 IDFGNEFKNIFGTPE----FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ 223
Query: 545 DMV 547
+ +
Sbjct: 224 ETL 226
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 85/183 (46%), Gaps = 30/183 (16%)
Query: 379 DFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDW 438
D E+++ I+ + QHPNV+ L Y +K + +L+ + A G L L A + L
Sbjct: 60 DIEREVSILKEI-QHPNVITLHEVYENKTDVILILELVAGGELFDFL-----AEKESLTE 113
Query: 439 ETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGC-------ISDFGLT-- 489
E + L GV ++HS+ + H ++K N+++ LD I DFGL
Sbjct: 114 EEATEFLKQILNGVYYLHSL---QIAHFDLKPENIML---LDRNVPKPRIKIIDFGLAHK 167
Query: 490 -----PLMNVPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRD 544
N+ TP + APE++ ++D++S GV+ +L+G +P T+
Sbjct: 168 IDFGNEFKNIFGTPE----FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ 223
Query: 545 DMV 547
+ +
Sbjct: 224 ETL 226
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 85/183 (46%), Gaps = 30/183 (16%)
Query: 379 DFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDW 438
D E+++ I+ + QHPNV+ L Y +K + +L+ + A G L L A + L
Sbjct: 60 DIEREVSILKEI-QHPNVITLHEVYENKTDVILILELVAGGELFDFL-----AEKESLTE 113
Query: 439 ETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGC-------ISDFGLT-- 489
E + L GV ++HS+ + H ++K N+++ LD I DFGL
Sbjct: 114 EEATEFLKQILNGVYYLHSL---QIAHFDLKPENIML---LDRNVPKPRIKIIDFGLAHK 167
Query: 490 -----PLMNVPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRD 544
N+ TP + APE++ ++D++S GV+ +L+G +P T+
Sbjct: 168 IDFGNEFKNIFGTPE----FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ 223
Query: 545 DMV 547
+ +
Sbjct: 224 ETL 226
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 85/183 (46%), Gaps = 30/183 (16%)
Query: 379 DFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDW 438
D E+++ I+ + QHPNV+ L Y +K + +L+ + A G L L A + L
Sbjct: 60 DIEREVSILKEI-QHPNVITLHEVYENKTDVILILELVAGGELFDFL-----AEKESLTE 113
Query: 439 ETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGC-------ISDFGLT-- 489
E + L GV ++HS+ + H ++K N+++ LD I DFGL
Sbjct: 114 EEATEFLKQILNGVYYLHSL---QIAHFDLKPENIML---LDRNVPKPRIKIIDFGLAHK 167
Query: 490 -----PLMNVPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRD 544
N+ TP + APE++ ++D++S GV+ +L+G +P T+
Sbjct: 168 IDFGNEFKNIFGTPE----FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ 223
Query: 545 DMV 547
+ +
Sbjct: 224 ETL 226
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 85/183 (46%), Gaps = 30/183 (16%)
Query: 379 DFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDW 438
D E+++ I+ + QHPNV+ L Y +K + +L+ + A G L L A + L
Sbjct: 59 DIEREVSILKEI-QHPNVITLHEVYENKTDVILILELVAGGELFDFL-----AEKESLTE 112
Query: 439 ETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGC-------ISDFGLT-- 489
E + L GV ++HS+ + H ++K N+++ LD I DFGL
Sbjct: 113 EEATEFLKQILNGVYYLHSL---QIAHFDLKPENIML---LDRNVPKPRIKIIDFGLAHK 166
Query: 490 -----PLMNVPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRD 544
N+ TP + APE++ ++D++S GV+ +L+G +P T+
Sbjct: 167 IDFGNEFKNIFGTPE----FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ 222
Query: 545 DMV 547
+ +
Sbjct: 223 ETL 225
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 85/183 (46%), Gaps = 30/183 (16%)
Query: 379 DFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDW 438
D E+++ I+ + QHPNV+ L Y +K + +L+ + A G L L A + L
Sbjct: 59 DIEREVSILKEI-QHPNVITLHEVYENKTDVILILELVAGGELFDFL-----AEKESLTE 112
Query: 439 ETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGC-------ISDFGLT-- 489
E + L GV ++HS+ + H ++K N+++ LD I DFGL
Sbjct: 113 EEATEFLKQILNGVYYLHSL---QIAHFDLKPENIML---LDRNVPKPRIKIIDFGLAHK 166
Query: 490 -----PLMNVPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRD 544
N+ TP + APE++ ++D++S GV+ +L+G +P T+
Sbjct: 167 IDFGNEFKNIFGTPE----FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ 222
Query: 545 DMV 547
+ +
Sbjct: 223 ETL 225
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 111/234 (47%), Gaps = 32/234 (13%)
Query: 394 PNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVA 453
P +V +YS E + ++ GSL +L + AGR P +V I +G+
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSI--AVIKGLT 118
Query: 454 HIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM--NVPATPSRSAGYRAPEVIE 511
++ K H ++K SN+L+N + + DFG++ + ++ + + Y +PE ++
Sbjct: 119 YLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQ 176
Query: 512 TRKHSHKSDVYSFGVLLLEMLTGKAPLQSP-TRDD------MVDLPRWVQSVVREEWTAE 564
+S +SD++S G+ L+EM G+ P+ P ++D + +L ++ + + +
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYIVNEPPPKLPSG 236
Query: 565 VFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEE-VRQSDSE 617
VF +E F N C+ K P R ++ ++ M+ +++SD+E
Sbjct: 237 VFSLEFQDFVN-------------KCLIKNPAERADLKQL--MVHAFIKRSDAE 275
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 81/165 (49%), Gaps = 17/165 (10%)
Query: 378 RDFEQQMEIVGRVGQHPNVVPLRAYYYS--KDEKLLVYDYFASGSLSTLLHGNRGAGRTP 435
RDF+++++I+ + +V R Y + E LV +Y SG L L +R
Sbjct: 53 RDFQREIQIL-KALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRAR---- 107
Query: 436 LDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM--- 492
LD ++LL +++ + +G + H ++ A N+L+ + I+DFGL L+
Sbjct: 108 LDAS---RLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLD 164
Query: 493 ---NVPATPSRS-AGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT 533
V P +S + APE + S +SDV+SFGV+L E+ T
Sbjct: 165 KDXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 91/199 (45%), Gaps = 17/199 (8%)
Query: 344 EVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXX---RDFEQQMEIVGRVGQHPNVVPLR 400
E +G+G+YG YKA T +++ I+ + +H N+V L
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKEL-KHSNIVKLY 66
Query: 401 AYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGG 460
++K +LV+++ L LL G L+ T LL G+A+ H
Sbjct: 67 DVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGG----LESVTAKSFLLQLLNGIAYCHDR-- 119
Query: 461 PKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR----SAGYRAPEVIE-TRKH 515
+ H ++K N+LIN++ + I+DFGL +P + YRAP+V+ ++K+
Sbjct: 120 -RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKY 178
Query: 516 SHKSDVYSFGVLLLEMLTG 534
S D++S G + EM+ G
Sbjct: 179 STTIDIWSVGCIFAEMVNG 197
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 79/157 (50%), Gaps = 15/157 (9%)
Query: 386 IVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKIL 445
++ R QH NVV + Y +E ++ ++ G+L+ ++ R L+ E +
Sbjct: 94 VIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVR------LNEEQIATVC 147
Query: 446 LGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR----- 500
+ +A++H+ G H +IK+ ++L+ D +SDFG ++ P R
Sbjct: 148 EAVLQALAYLHAQG---VIHRDIKSDSILLTLDGRVKLSDFGFCAQIS-KDVPKRKXLVG 203
Query: 501 SAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAP 537
+ + APEVI ++ + D++S G++++EM+ G+ P
Sbjct: 204 TPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPP 240
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 91/199 (45%), Gaps = 17/199 (8%)
Query: 344 EVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXX---RDFEQQMEIVGRVGQHPNVVPLR 400
E +G+G+YG YKA T +++ I+ + +H N+V L
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKEL-KHSNIVKLY 66
Query: 401 AYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGG 460
++K +LV+++ L LL G L+ T LL G+A+ H
Sbjct: 67 DVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGG----LESVTAKSFLLQLLNGIAYCHDR-- 119
Query: 461 PKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR----SAGYRAPEVIE-TRKH 515
+ H ++K N+LIN++ + I+DFGL +P + YRAP+V+ ++K+
Sbjct: 120 -RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKY 178
Query: 516 SHKSDVYSFGVLLLEMLTG 534
S D++S G + EM+ G
Sbjct: 179 STTIDIWSVGCIFAEMVNG 197
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 76/165 (46%), Gaps = 13/165 (7%)
Query: 381 EQQMEI-VGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWE 439
+ MEI + R H +VV ++ D +V + SL L H R A P
Sbjct: 63 KMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL-HKRRKALTEPEARY 121
Query: 440 TRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPS 499
+I+LG ++H + H ++K N+ +N+DL+ I DFGL +
Sbjct: 122 YLRQIVLGCQ----YLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK 174
Query: 500 RS----AGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQS 540
++ Y APEV+ + HS + DV+S G ++ +L GK P ++
Sbjct: 175 KTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET 219
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 75/162 (46%), Gaps = 13/162 (8%)
Query: 384 MEI-VGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRV 442
MEI + R H +VV ++ D +V + SL L H R A P
Sbjct: 64 MEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL-HKRRKALTEPEARYYLR 122
Query: 443 KILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR-- 500
+I+LG ++H + H ++K N+ +N+DL+ I DFGL + +
Sbjct: 123 QIVLGCQ----YLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVL 175
Query: 501 --SAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQS 540
+ Y APEV+ + HS + DV+S G ++ +L GK P ++
Sbjct: 176 CGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET 217
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 76/165 (46%), Gaps = 13/165 (7%)
Query: 381 EQQMEI-VGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWE 439
+ MEI + R H +VV ++ D +V + SL L H R A P
Sbjct: 63 KMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL-HKRRKALTEPEARY 121
Query: 440 TRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPS 499
+I+LG ++H + H ++K N+ +N+DL+ I DFGL +
Sbjct: 122 YLRQIVLGCQ----YLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK 174
Query: 500 RS----AGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQS 540
++ Y APEV+ + HS + DV+S G ++ +L GK P ++
Sbjct: 175 KTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET 219
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 78/155 (50%), Gaps = 9/155 (5%)
Query: 394 PNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVA 453
P +V +YS E + ++ GSL +L + AGR P +V I +G+
Sbjct: 91 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSI--AVIKGLT 145
Query: 454 HIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM--NVPATPSRSAGYRAPEVIE 511
++ K H ++K SN+L+N + + DFG++ + ++ + + Y +PE ++
Sbjct: 146 YLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQ 203
Query: 512 TRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDM 546
+S +SD++S G+ L+EM G+ P+ P ++
Sbjct: 204 GTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEL 238
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 76/165 (46%), Gaps = 13/165 (7%)
Query: 381 EQQMEI-VGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWE 439
+ MEI + R H +VV ++ D +V + SL L H R A P
Sbjct: 87 KMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL-HKRRKALTEPEARY 145
Query: 440 TRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPS 499
+I+LG ++H + H ++K N+ +N+DL+ I DFGL +
Sbjct: 146 YLRQIVLGCQ----YLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK 198
Query: 500 R----SAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQS 540
+ + Y APEV+ + HS + DV+S G ++ +L GK P ++
Sbjct: 199 KVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET 243
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 76/165 (46%), Gaps = 13/165 (7%)
Query: 381 EQQMEI-VGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWE 439
+ MEI + R H +VV ++ D +V + SL L H R A P
Sbjct: 85 KMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL-HKRRKALTEPEARY 143
Query: 440 TRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPS 499
+I+LG ++H + H ++K N+ +N+DL+ I DFGL +
Sbjct: 144 YLRQIVLGCQ----YLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK 196
Query: 500 R----SAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQS 540
+ + Y APEV+ + HS + DV+S G ++ +L GK P ++
Sbjct: 197 KVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET 241
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 76/165 (46%), Gaps = 13/165 (7%)
Query: 381 EQQMEI-VGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWE 439
+ MEI + R H +VV ++ D +V + SL L H R A P
Sbjct: 67 KMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL-HKRRKALTEPEARY 125
Query: 440 TRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPS 499
+I+LG ++H + H ++K N+ +N+DL+ I DFGL +
Sbjct: 126 YLRQIVLGCQ----YLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK 178
Query: 500 RS----AGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQS 540
++ Y APEV+ + HS + DV+S G ++ +L GK P ++
Sbjct: 179 KTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET 223
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 78/155 (50%), Gaps = 9/155 (5%)
Query: 394 PNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVA 453
P +V +YS E + ++ GSL +L + AGR P +V I +G+
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSI--AVIKGLT 118
Query: 454 HIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM--NVPATPSRSAGYRAPEVIE 511
++ K H ++K SN+L+N + + DFG++ + ++ + + Y +PE ++
Sbjct: 119 YLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQ 176
Query: 512 TRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDM 546
+S +SD++S G+ L+EM G+ P+ P ++
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEL 211
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 78/155 (50%), Gaps = 9/155 (5%)
Query: 394 PNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVA 453
P +V +YS E + ++ GSL +L + AGR P +V I +G+
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSI--AVIKGLT 118
Query: 454 HIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM--NVPATPSRSAGYRAPEVIE 511
++ K H ++K SN+L+N + + DFG++ + ++ + + Y +PE ++
Sbjct: 119 YLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQ 176
Query: 512 TRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDM 546
+S +SD++S G+ L+EM G+ P+ P ++
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEL 211
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 90/213 (42%), Gaps = 17/213 (7%)
Query: 345 VLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFE-----QQMEIVGRVGQHPNVVPL 399
VLGKGS+G A ++E+ +D + + I+ HP + L
Sbjct: 30 VLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQL 89
Query: 400 RAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMG 459
+ + D V ++ G L + +R E R + A ++ + +
Sbjct: 90 FCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFD------EARARFY--AAEIISALMFLH 141
Query: 460 GPKFTHGNIKASNVLINQDLDGCISDFGLTP--LMN--VPATPSRSAGYRAPEVIETRKH 515
+ ++K NVL++ + ++DFG+ + N AT + Y APE+++ +
Sbjct: 142 DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLY 201
Query: 516 SHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVD 548
D ++ GVLL EML G AP ++ DD+ +
Sbjct: 202 GPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFE 234
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 111/255 (43%), Gaps = 45/255 (17%)
Query: 378 RDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLD 437
+DF+++ E++ + QH ++V D ++V++Y G L+ L + +D
Sbjct: 62 KDFQREAELLTNL-QHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVD 120
Query: 438 WETR-VKILLGTARGVAHIHS--------MGGPKFTHGNIKASNVLINQDLDGCISDFGL 488
+ R K LG ++ + HI S + F H ++ N L+ +L I DFG+
Sbjct: 121 GQPRQAKGELGLSQ-MLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGM 179
Query: 489 TPLMNVPATPSRSAG--------YRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQ 539
+ +V +T G + PE I RK + +SDV+SFGV+L E+ T GK P
Sbjct: 180 S--RDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWF 237
Query: 540 SPTRDDMVDLPRWVQSVVREE---WTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPD 596
+ ++++ Q V E EV+DV L C + P
Sbjct: 238 QLSNTEVIECI--TQGRVLERPRVCPKEVYDVML------------------GCWQREPQ 277
Query: 597 MRPNMDEVVRMIEEV 611
R N+ E+ +++ +
Sbjct: 278 QRLNIKEIYKILHAL 292
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 79/158 (50%), Gaps = 13/158 (8%)
Query: 389 RVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGT 448
R+ +HP+++ L SKDE ++V +Y + ++ ++ + + E R +
Sbjct: 69 RLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMS-----EQEAR-RFFQQI 122
Query: 449 ARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM---NVPATPSRSAGYR 505
V + H K H ++K N+L+++ L+ I+DFGL+ +M N T S Y
Sbjct: 123 ISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYA 179
Query: 506 APEVIETRKHSH-KSDVYSFGVLLLEMLTGKAPLQSPT 542
APEVI + ++ + DV+S GV+L ML + P +
Sbjct: 180 APEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES 217
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 78/154 (50%), Gaps = 13/154 (8%)
Query: 389 RVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGT 448
R+ +HP+++ L SKDE ++V +Y + ++ ++ + + E R +
Sbjct: 59 RLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMS-----EQEAR-RFFQQI 112
Query: 449 ARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM---NVPATPSRSAGYR 505
V + H K H ++K N+L+++ L+ I+DFGL+ +M N T S Y
Sbjct: 113 ISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYA 169
Query: 506 APEVIETRKHSH-KSDVYSFGVLLLEMLTGKAPL 538
APEVI + ++ + DV+S GV+L ML + P
Sbjct: 170 APEVISGKLYAGPEVDVWSCGVILYVMLCRRLPF 203
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 78/155 (50%), Gaps = 9/155 (5%)
Query: 394 PNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVA 453
P +V +YS E + ++ GSL +L + AGR P +V I +G+
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSI--AVIKGLT 118
Query: 454 HIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM--NVPATPSRSAGYRAPEVIE 511
++ K H ++K SN+L+N + + DFG++ + ++ + + Y +PE ++
Sbjct: 119 YLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQ 176
Query: 512 TRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDM 546
+S +SD++S G+ L+EM G+ P+ P ++
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEL 211
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 78/154 (50%), Gaps = 13/154 (8%)
Query: 389 RVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGT 448
R+ +HP+++ L SKDE ++V +Y + ++ ++ + + E R +
Sbjct: 63 RLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMS-----EQEAR-RFFQQI 116
Query: 449 ARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM---NVPATPSRSAGYR 505
V + H K H ++K N+L+++ L+ I+DFGL+ +M N T S Y
Sbjct: 117 ISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYA 173
Query: 506 APEVIETRKHSH-KSDVYSFGVLLLEMLTGKAPL 538
APEVI + ++ + DV+S GV+L ML + P
Sbjct: 174 APEVISGKLYAGPEVDVWSCGVILYVMLCRRLPF 207
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 90/199 (45%), Gaps = 17/199 (8%)
Query: 346 LGKGSYGTAYKAV---LEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAY 402
+GKGS+G YK + +E D +Q++ ++ + P +
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDS-PYITRYFGS 85
Query: 403 YYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPK 462
Y + ++ +Y GS LL PL+ IL +G+ ++HS +
Sbjct: 86 YLKSTKLWIIMEYLGGGSALDLLKPG------PLEETYIATILREILKGLDYLHS---ER 136
Query: 463 FTHGNIKASNVLINQDLDGCISDFGLT-PLMNVPATPSRSAG---YRAPEVIETRKHSHK 518
H +IKA+NVL+++ D ++DFG+ L + + G + APEVI+ + K
Sbjct: 137 KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDFK 196
Query: 519 SDVYSFGVLLLEMLTGKAP 537
+D++S G+ +E+ G+ P
Sbjct: 197 ADIWSLGITAIELAKGEPP 215
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 79/158 (50%), Gaps = 13/158 (8%)
Query: 389 RVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGT 448
R+ +HP+++ L SKDE ++V +Y + ++ ++ + + E R +
Sbjct: 68 RLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMS-----EQEAR-RFFQQI 121
Query: 449 ARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM---NVPATPSRSAGYR 505
V + H K H ++K N+L+++ L+ I+DFGL+ +M N T S Y
Sbjct: 122 ISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYA 178
Query: 506 APEVIETRKHSH-KSDVYSFGVLLLEMLTGKAPLQSPT 542
APEVI + ++ + DV+S GV+L ML + P +
Sbjct: 179 APEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES 216
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 85/183 (46%), Gaps = 30/183 (16%)
Query: 379 DFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDW 438
D E+++ I+ + QHPNV+ L Y +K + +L+ + A G L L A + L
Sbjct: 60 DIEREVSILKEI-QHPNVITLHEVYENKTDVILIGELVAGGELFDFL-----AEKESLTE 113
Query: 439 ETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGC-------ISDFGLT-- 489
E + L GV ++HS+ + H ++K N+++ LD I DFGL
Sbjct: 114 EEATEFLKQILNGVYYLHSL---QIAHFDLKPENIML---LDRNVPKPRIKIIDFGLAHK 167
Query: 490 -----PLMNVPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRD 544
N+ TP + APE++ ++D++S GV+ +L+G +P T+
Sbjct: 168 IDFGNEFKNIFGTPE----FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ 223
Query: 545 DMV 547
+ +
Sbjct: 224 ETL 226
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 92/211 (43%), Gaps = 14/211 (6%)
Query: 346 LGKGSYGTAYKAVLEE-STTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAYYY 404
LG G YG Y V ++ S T +F ++ ++ + +HPN+V L
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHPNLVQLLGVCT 98
Query: 405 SKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFT 464
+ +V +Y G+L L R R + T V +L + + + + F
Sbjct: 99 LEPPFYIVTEYMPYGNLLDYL---RECNREEV---TAVVLLYMATQISSAMEYLEKKNFI 152
Query: 465 HGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG-----YRAPEVIETRKHSHKS 519
H ++ A N L+ ++ ++DFGL+ LM + + + APE + S KS
Sbjct: 153 HRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKS 212
Query: 520 DVYSFGVLLLEMLT-GKAPLQSPTRDDMVDL 549
DV++FGVLL E+ T G +P + DL
Sbjct: 213 DVWAFGVLLWEIATYGMSPYPGIDLSQVYDL 243
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 67/155 (43%), Gaps = 24/155 (15%)
Query: 411 LVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHS-------MGGPKF 463
L+ + GSLS L N + W I ARG+A++H P
Sbjct: 99 LITAFHEKGSLSDFLKAN------VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAI 152
Query: 464 THGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG------YRAPEVIE-----T 512
+H +IK+ NVL+ +L CI+DFGL + + G Y APEV+E
Sbjct: 153 SHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQ 212
Query: 513 RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMV 547
R + D+Y+ G++L E+ + P + M+
Sbjct: 213 RDAFLRIDMYAMGLVLWELASRCTAADGPVDEYML 247
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 78/155 (50%), Gaps = 9/155 (5%)
Query: 394 PNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVA 453
P +V +YS E + ++ GSL +L + AGR P +V I +G+
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSI--AVIKGLT 118
Query: 454 HIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM--NVPATPSRSAGYRAPEVIE 511
++ K H ++K SN+L+N + + DFG++ + ++ + + Y +PE ++
Sbjct: 119 YLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQ 176
Query: 512 TRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDM 546
+S +SD++S G+ L+EM G+ P+ P ++
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEL 211
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 80/157 (50%), Gaps = 13/157 (8%)
Query: 394 PNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVA 453
P +V +YS E + ++ GSL +L + AGR P +V I +G+
Sbjct: 126 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSI--AVIKGLT 180
Query: 454 HIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLT-PLMNVPATP---SRSAGYRAPEV 509
++ K H ++K SN+L+N + + DFG++ L++ A +RS Y +PE
Sbjct: 181 YLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRS--YMSPER 236
Query: 510 IETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDM 546
++ +S +SD++S G+ L+EM G+ P+ P ++
Sbjct: 237 LQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEL 273
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 95/213 (44%), Gaps = 19/213 (8%)
Query: 344 EVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEI----VGRVGQHPNVVPL 399
E LG G+Y T YK + TT + I + + +H N+V L
Sbjct: 11 EKLGNGTYATVYKGL--NKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRL 68
Query: 400 RAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETR-VKIL-LGTARGVAHIHS 457
+++++ LV++ F L + +R G TP E VK +G+A H
Sbjct: 69 YDVIHTENKLTLVFE-FMDNDLKKYM-DSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHE 126
Query: 458 MGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSA----GYRAPEVIE-T 512
K H ++K N+LIN+ + DFGL +P S YRAP+V+ +
Sbjct: 127 ---NKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGS 183
Query: 513 RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDD 545
R +S D++S G +L EM+TGK PL T D+
Sbjct: 184 RTYSTSIDIWSCGCILAEMITGK-PLFPGTNDE 215
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 93/210 (44%), Gaps = 19/210 (9%)
Query: 343 AEVLGKGSYGT---AYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPL 399
+ LG+G+ G A V EE+ + ++++ + ++ H NVV
Sbjct: 11 VQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI-CINKMLNHENVVKF 69
Query: 400 RAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMG 459
+ + + L +Y + G L + + G + GV ++H +G
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-----RFFHQLMAGVVYLHGIG 124
Query: 460 GPKFTHGNIKASNVLINQDLDGCISDFGLTPLM---NVPATPSRSAG---YRAPEVIETR 513
TH +IK N+L+++ + ISDFGL + N ++ G Y APE+++ R
Sbjct: 125 ---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 514 K-HSHKSDVYSFGVLLLEMLTGKAPLQSPT 542
+ H+ DV+S G++L ML G+ P P+
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPS 211
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 100/227 (44%), Gaps = 28/227 (12%)
Query: 324 VFFEGCSYNFDLEDLLRASAEVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXX------ 377
VF E NFD ++LRA +GKGS+G +++++ T
Sbjct: 5 VFDENEDVNFDHFEILRA----IGKGSFGKV--CIVQKNDTKKMYAMKYMNKQKCVERNE 58
Query: 378 -RDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPL 436
R+ ++++I+ + +HP +V L + +++ +V D G L L N
Sbjct: 59 VRNVFKELQIMQGL-EHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFK---- 113
Query: 437 DWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA 496
E VK+ + V + + + H ++K N+L+++ I+DF + ++
Sbjct: 114 --EETVKLFI--CELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRET 169
Query: 497 TPSRSAG---YRAPEVIETRK---HSHKSDVYSFGVLLLEMLTGKAP 537
+ AG Y APE+ +RK +S D +S GV E+L G+ P
Sbjct: 170 QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRP 216
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 94/204 (46%), Gaps = 23/204 (11%)
Query: 344 EVLGKGSYGTAYKAV---LEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLR 400
E +GKGS+G +K + ++ D +Q++ ++ + + +
Sbjct: 29 ERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQC----DSSYVT 84
Query: 401 AYY--YSKDEKL-LVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHS 457
YY Y K KL ++ +Y GS LL P D +L +G+ ++HS
Sbjct: 85 KYYGSYLKGSKLWIIMEYLGGGSALDLLRAG------PFDEFQIATMLKEILKGLDYLHS 138
Query: 458 MGGPKFTHGNIKASNVLINQDLDGCISDFGLT-PLMNVPATPSRSAG---YRAPEVIETR 513
K H +IKA+NVL+++ D ++DFG+ L + + G + APEVI+
Sbjct: 139 ---EKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQS 195
Query: 514 KHSHKSDVYSFGVLLLEMLTGKAP 537
+ K+D++S G+ +E+ G+ P
Sbjct: 196 AYDSKADIWSLGITAIELAKGEPP 219
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 52/104 (50%), Gaps = 10/104 (9%)
Query: 436 LDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGL-----TP 490
LD E +L G+ H+HS G H ++K SN+++ D I DFGL T
Sbjct: 123 LDHERMSYLLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAGTS 179
Query: 491 LMNVPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTG 534
M P +R YRAPEVI + D++S GV++ EM+ G
Sbjct: 180 FMMTPYVVTRY--YRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 52/104 (50%), Gaps = 10/104 (9%)
Query: 436 LDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGL-----TP 490
LD E +L G+ H+HS G H ++K SN+++ D I DFGL T
Sbjct: 123 LDHERMSYLLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAGTS 179
Query: 491 LMNVPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTG 534
M P +R YRAPEVI + D++S GV++ EM+ G
Sbjct: 180 FMMTPYVVTRY--YRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 112/263 (42%), Gaps = 41/263 (15%)
Query: 293 VSKGKASSGGRSEKP--KEEFGSGVQEPEKNKLVFFEGCSYNFDLEDLLRASAEV-LGKG 349
++K A+ G RS +P K E GV EK K V +E Y E++ A+ ++ LG+G
Sbjct: 32 LAKTWAARGSRSREPSPKTEDNEGVLLTEKLKPVDYE---YR---EEVHWATHQLRLGRG 85
Query: 350 SYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEK 409
S+G ++ +E+ T E+ M G P +VPL
Sbjct: 86 SFGEVHR--MEDKQTGFQCAVKKVRLEVFRAEELMACAGLTS--PRIVPLYGAVREGPWV 141
Query: 410 LLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTA-RGVAHIHSMGGPKFTHGNI 468
+ + GSL L+ + G P E R LG A G+ ++HS + HG++
Sbjct: 142 NIFMELLEGGSLGQLV---KEQGCLP---EDRALYYLGQALEGLEYLHSR---RILHGDV 192
Query: 469 KASNVLINQD-LDGCISDFGLTPLMN-------------VPATPSRSAGYRAPEVIETRK 514
KA NVL++ D + DFG + +P T + + APEV+ R
Sbjct: 193 KADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTET----HMAPEVVLGRS 248
Query: 515 HSHKSDVYSFGVLLLEMLTGKAP 537
K DV+S ++L ML G P
Sbjct: 249 CDAKVDVWSSCCMMLHMLNGCHP 271
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 79/155 (50%), Gaps = 9/155 (5%)
Query: 394 PNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVA 453
P +V +YS E + ++ GSL +L + A R P E K+ + RG+A
Sbjct: 74 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVL---KEAKRIP--EEILGKVSIAVLRGLA 128
Query: 454 HIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM--NVPATPSRSAGYRAPEVIE 511
++ + H ++K SN+L+N + + DFG++ + ++ + + Y APE ++
Sbjct: 129 YLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMAPERLQ 186
Query: 512 TRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDM 546
+S +SD++S G+ L+E+ G+ P+ P ++
Sbjct: 187 GTHYSVQSDIWSMGLSLVELAVGRYPIPPPDAKEL 221
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 112/263 (42%), Gaps = 41/263 (15%)
Query: 293 VSKGKASSGGRSEKP--KEEFGSGVQEPEKNKLVFFEGCSYNFDLEDLLRASAEV-LGKG 349
++K A+ G RS +P K E GV EK K V +E Y E++ A+ ++ LG+G
Sbjct: 51 LAKTWAARGSRSREPSPKTEDNEGVLLTEKLKPVDYE---YR---EEVHWATHQLRLGRG 104
Query: 350 SYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEK 409
S+G ++ +E+ T E+ M G P +VPL
Sbjct: 105 SFGEVHR--MEDKQTGFQCAVKKVRLEVFRAEELMACAGLTS--PRIVPLYGAVREGPWV 160
Query: 410 LLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTA-RGVAHIHSMGGPKFTHGNI 468
+ + GSL L+ + G P E R LG A G+ ++HS + HG++
Sbjct: 161 NIFMELLEGGSLGQLV---KEQGCLP---EDRALYYLGQALEGLEYLHSR---RILHGDV 211
Query: 469 KASNVLINQD-LDGCISDFGLTPLMN-------------VPATPSRSAGYRAPEVIETRK 514
KA NVL++ D + DFG + +P T + + APEV+ R
Sbjct: 212 KADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTET----HMAPEVVLGRS 267
Query: 515 HSHKSDVYSFGVLLLEMLTGKAP 537
K DV+S ++L ML G P
Sbjct: 268 CDAKVDVWSSCCMMLHMLNGCHP 290
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 97/205 (47%), Gaps = 23/205 (11%)
Query: 346 LGKGSYGTAYKAVLEES--TTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAYY 403
LG G++G YKA +E+ D+ ++EI+ HP +V L Y
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATC-DHPYIVKLLGAY 77
Query: 404 YSKDEKLLVYDYFASGSL-STLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPK 462
Y + ++ ++ G++ + +L +RG T +I + + + ++ + +
Sbjct: 78 YHDGKLWIMIEFCPGGAVDAIMLELDRGL--------TEPQIQVVCRQMLEALNFLHSKR 129
Query: 463 FTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSA-----GYRAPEVI--ETRK- 514
H ++KA NVL+ + D ++DFG++ N+ R + + APEV+ ET K
Sbjct: 130 IIHRDLKAGNVLMTLEGDIRLADFGVSA-KNLKTLQKRDSFIGTPYWMAPEVVMCETMKD 188
Query: 515 --HSHKSDVYSFGVLLLEMLTGKAP 537
+ +K+D++S G+ L+EM + P
Sbjct: 189 TPYDYKADIWSLGITLIEMAQIEPP 213
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 105/229 (45%), Gaps = 32/229 (13%)
Query: 394 PNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVA 453
P +V +YS E + ++ GSL +L + AGR P +V I +G+
Sbjct: 67 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSI--AVIKGLT 121
Query: 454 HIHSMGGPKFTHGNIKASNVLINQDLDGCISDFG----LTPLMNVPATPSRSAGYRAPEV 509
++ K H ++K SN+L+N + + DFG L M +RS Y +PE
Sbjct: 122 YLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEFVGTRS--YMSPER 177
Query: 510 IETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVE 569
++ +S +SD++S G+ L+EM G+ P +++D ++ + + + VF +E
Sbjct: 178 LQGTHYSVQSDIWSMGLSLVEMAVGRYPRPPMAIFELLD---YIVNEPPPKLPSAVFSLE 234
Query: 570 LMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEE-VRQSDSE 617
F N C+ K P R ++ ++ M+ +++SD+E
Sbjct: 235 FQDFVN-------------KCLIKNPAERADLKQL--MVHAFIKRSDAE 268
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 92/212 (43%), Gaps = 37/212 (17%)
Query: 346 LGKGSYGTAYKAVLE-ESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAYYY 404
+GKG YG + E R+ E ++ R H N++ A
Sbjct: 45 IGKGRYGEVWMGKWRGEKVAVKVFFTTEEASWFRETEIYQTVLMR---HENILGFIAADI 101
Query: 405 ----SKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHS--- 457
S + L+ DY +GSL L T LD ++ +K+ + G+ H+H+
Sbjct: 102 KGTGSWTQLYLITDYHENGSLYDYLKS------TTLDAKSMLKLAYSSVSGLCHLHTEIF 155
Query: 458 --MGGPKFTHGNIKASNVLINQDLDGCISDFGL-------TPLMNVPATPSRSAG---YR 505
G P H ++K+ N+L+ ++ CI+D GL T +++P P+ G Y
Sbjct: 156 STQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIP--PNTRVGTKRYM 213
Query: 506 APEVIE---TRKHSHK---SDVYSFGVLLLEM 531
PEV++ R H +D+YSFG++L E+
Sbjct: 214 PPEVLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 52/104 (50%), Gaps = 10/104 (9%)
Query: 436 LDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGL-----TP 490
LD E +L G+ H+HS G H ++K SN+++ D I DFGL T
Sbjct: 125 LDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 181
Query: 491 LMNVPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTG 534
M VP +R YRAPEVI + D++S G ++ EM+ G
Sbjct: 182 FMMVPFVVTRY--YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 97/205 (47%), Gaps = 23/205 (11%)
Query: 346 LGKGSYGTAYKAVLEES--TTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAYY 403
LG G++G YKA +E+ D+ ++EI+ HP +V L Y
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATC-DHPYIVKLLGAY 85
Query: 404 YSKDEKLLVYDYFASGSL-STLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPK 462
Y + ++ ++ G++ + +L +RG T +I + + + ++ + +
Sbjct: 86 YHDGKLWIMIEFCPGGAVDAIMLELDRGL--------TEPQIQVVCRQMLEALNFLHSKR 137
Query: 463 FTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSA-----GYRAPEVI--ETRK- 514
H ++KA NVL+ + D ++DFG++ N+ R + + APEV+ ET K
Sbjct: 138 IIHRDLKAGNVLMTLEGDIRLADFGVSA-KNLKTLQKRDSFIGTPYWMAPEVVMCETMKD 196
Query: 515 --HSHKSDVYSFGVLLLEMLTGKAP 537
+ +K+D++S G+ L+EM + P
Sbjct: 197 TPYDYKADIWSLGITLIEMAQIEPP 221
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 96/208 (46%), Gaps = 31/208 (14%)
Query: 414 DYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNV 473
++ G+L + RG LD +++ +GV +IHS K H ++K SN+
Sbjct: 114 EFCDKGTLEQWIEKRRGE---KLDKVLALELFEQITKGVDYIHS---KKLIHRDLKPSNI 167
Query: 474 LINQDLDGCISDFGLTPLMNVPATPSRSAG---YRAPEVIETRKHSHKSDVYSFGVLLLE 530
+ I DFGL + +RS G Y +PE I ++ + + D+Y+ G++L E
Sbjct: 168 FLVDTKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAE 227
Query: 531 MLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMAC 590
+L D + ++ +R+ +++FD + E+ ++Q L
Sbjct: 228 LL--------HVCDTAFETSKFFTD-LRDGIISDIFDKK-------EKTLLQKL------ 265
Query: 591 VAKVPDMRPNMDEVVRMIEEVRQSDSEN 618
++K P+ RPN E++R + ++S +N
Sbjct: 266 LSKKPEDRPNTSEILRTLTVWKKSPEKN 293
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 114/280 (40%), Gaps = 53/280 (18%)
Query: 344 EVLGKGSYGTAYKAVL--------EESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPN 395
E LG+ +G YK L ++ +F + + R+ QHPN
Sbjct: 32 EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARL-QHPN 90
Query: 396 VVPLRAYYYSKDEKL-LVYDYFASGSLSTLL-----HGNRGAG------RTPLDWETRVK 443
VV L +KD+ L +++ Y + G L L H + G+ ++ L+ V
Sbjct: 91 VVCLLGVV-TKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVH 149
Query: 444 ILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGL---------TPLMNV 494
++ A G+ ++ S H ++ NVL+ L+ ISD GL L+
Sbjct: 150 LVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGN 206
Query: 495 PATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMV------ 547
P R + APE I K S SD++S+GV+L E+ + G P + D+V
Sbjct: 207 SLLPIR---WMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNR 263
Query: 548 -------DLPRWVQSVVREEWTAEVFDVELMRFQNIEEEM 580
D P WV +++ E W F RF++I +
Sbjct: 264 QVLPCPDDCPAWVYALMIECWNE--FPSRRPRFKDIHSRL 301
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 114/280 (40%), Gaps = 53/280 (18%)
Query: 344 EVLGKGSYGTAYKAVL--------EESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPN 395
E LG+ +G YK L ++ +F + + R+ QHPN
Sbjct: 15 EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARL-QHPN 73
Query: 396 VVPLRAYYYSKDEKL-LVYDYFASGSLSTLL-----HGNRGAG------RTPLDWETRVK 443
VV L +KD+ L +++ Y + G L L H + G+ ++ L+ V
Sbjct: 74 VVCLLGVV-TKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVH 132
Query: 444 ILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGL---------TPLMNV 494
++ A G+ ++ S H ++ NVL+ L+ ISD GL L+
Sbjct: 133 LVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGN 189
Query: 495 PATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMV------ 547
P R + APE I K S SD++S+GV+L E+ + G P + D+V
Sbjct: 190 SLLPIR---WMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNR 246
Query: 548 -------DLPRWVQSVVREEWTAEVFDVELMRFQNIEEEM 580
D P WV +++ E W F RF++I +
Sbjct: 247 QVLPCPDDCPAWVYALMIECWNE--FPSRRPRFKDIHSRL 284
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 94/218 (43%), Gaps = 26/218 (11%)
Query: 343 AEVLGKGSYGTAYKAV-LEESTTXXXXXXXXXXXXXRDFEQQMEIVGRV-----GQHPNV 396
+VLG G++GT YK + + E T + +E + HP++
Sbjct: 20 VKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHL 79
Query: 397 VPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRG--AGRTPLDWETRVKILLGTARGVAH 454
V L S +L V G L +H ++ + L+W ++ A+G+ +
Sbjct: 80 VRLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQI------AKGMMY 132
Query: 455 IHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAGYRAP------E 508
+ + H ++ A NVL+ I+DFGL L+ + G + P E
Sbjct: 133 LEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALE 189
Query: 509 VIETRKHSHKSDVYSFGVLLLEMLT--GKAPLQSPTRD 544
I RK +H+SDV+S+GV + E++T GK PTR+
Sbjct: 190 CIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTRE 227
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 82/166 (49%), Gaps = 19/166 (11%)
Query: 378 RDFEQQMEIVGRVGQHPN-VVPLRAYYYS--KDEKLLVYDYFASGSLSTLLHGNRGAGRT 434
RDF+++++I+ + H + +V R Y + LV +Y SG L L +R
Sbjct: 69 RDFQREIQILKAL--HSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR--- 123
Query: 435 PLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM-- 492
LD ++LL +++ + +G + H ++ A N+L+ + I+DFGL L+
Sbjct: 124 -LDAS---RLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPL 179
Query: 493 ----NVPATPSRS-AGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT 533
V P +S + APE + S +SDV+SFGV+L E+ T
Sbjct: 180 DKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 82/166 (49%), Gaps = 19/166 (11%)
Query: 378 RDFEQQMEIVGRVGQHPN-VVPLRAYYYS--KDEKLLVYDYFASGSLSTLLHGNRGAGRT 434
RDF+++++I+ + H + +V R Y + LV +Y SG L L +R
Sbjct: 56 RDFQREIQILKAL--HSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR--- 110
Query: 435 PLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM-- 492
LD ++LL +++ + +G + H ++ A N+L+ + I+DFGL L+
Sbjct: 111 -LDAS---RLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPL 166
Query: 493 ----NVPATPSRS-AGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT 533
V P +S + APE + S +SDV+SFGV+L E+ T
Sbjct: 167 DKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 82/166 (49%), Gaps = 19/166 (11%)
Query: 378 RDFEQQMEIVGRVGQHPN-VVPLRAYYYS--KDEKLLVYDYFASGSLSTLLHGNRGAGRT 434
RDF+++++I+ + H + +V R Y + LV +Y SG L L +R
Sbjct: 57 RDFQREIQILKAL--HSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR--- 111
Query: 435 PLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM-- 492
LD ++LL +++ + +G + H ++ A N+L+ + I+DFGL L+
Sbjct: 112 -LDAS---RLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPL 167
Query: 493 ----NVPATPSRS-AGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT 533
V P +S + APE + S +SDV+SFGV+L E+ T
Sbjct: 168 DKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 97/212 (45%), Gaps = 29/212 (13%)
Query: 346 LGKGSYGTAYKAVLEESTTXXXXXX---------XXXXXXXRDFEQQMEIVGRVGQHPNV 396
+GKG +G +K L + + ++F++++ I+ + HPN+
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNL-NHPNI 85
Query: 397 VPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIH 456
V L Y + +V ++ G L L P+ W +++++L A G+ ++
Sbjct: 86 VKL--YGLMHNPPRMVMEFVPCGDLYHRLLDKA----HPIKWSVKLRLMLDIALGIEYMQ 139
Query: 457 SMGGPKFTHGNIKASNVLINQDLD------GCISDFGLTPLMNVPATPSRSAGYR--APE 508
+ P H ++++ N+ + Q LD ++DFGL+ +V + ++ APE
Sbjct: 140 NQN-PPIVHRDLRSPNIFL-QSLDENAPVCAKVADFGLSQ-QSVHSVSGLLGNFQWMAPE 196
Query: 509 VI--ETRKHSHKSDVYSFGVLLLEMLTGKAPL 538
I E ++ K+D YSF ++L +LTG+ P
Sbjct: 197 TIGAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 87/201 (43%), Gaps = 17/201 (8%)
Query: 346 LGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVG-----QHPNVVPLR 400
+G GS+G Y A + + + E+ +I+ V +HPN + R
Sbjct: 62 IGHGSFGAVYFA-RDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYR 120
Query: 401 AYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGG 460
Y + LV +Y GS S LL + PL + G +G+A++HS
Sbjct: 121 GCYLREHTAWLVMEY-CLGSASDLLE----VHKKPLQEVEIAAVTHGALQGLAYLHSHN- 174
Query: 461 PKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAGYRAPEVI---ETRKHSH 517
H ++KA N+L+++ + DFG +M + + APEVI + ++
Sbjct: 175 --MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMDEGQYDG 232
Query: 518 KSDVYSFGVLLLEMLTGKAPL 538
K DV+S G+ +E+ K PL
Sbjct: 233 KVDVWSLGITCIELAERKPPL 253
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 87/201 (43%), Gaps = 17/201 (8%)
Query: 346 LGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVG-----QHPNVVPLR 400
+G GS+G Y A + + + E+ +I+ V +HPN + R
Sbjct: 23 IGHGSFGAVYFA-RDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYR 81
Query: 401 AYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGG 460
Y + LV +Y GS S LL + PL + G +G+A++HS
Sbjct: 82 GCYLREHTAWLVMEY-CLGSASDLLE----VHKKPLQEVEIAAVTHGALQGLAYLHSHN- 135
Query: 461 PKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAGYRAPEVI---ETRKHSH 517
H ++KA N+L+++ + DFG +M + + APEVI + ++
Sbjct: 136 --MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMDEGQYDG 193
Query: 518 KSDVYSFGVLLLEMLTGKAPL 538
K DV+S G+ +E+ K PL
Sbjct: 194 KVDVWSLGITCIELAERKPPL 214
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 96/217 (44%), Gaps = 15/217 (6%)
Query: 331 YNFDLEDLLRASAEVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQ---QMEIV 387
++F EDL + E+ G+G+YG+ K V + S ++ +Q +++V
Sbjct: 17 WDFTAEDL-KDLGEI-GRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVV 74
Query: 388 GRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLG 447
R P +V + + + + + S S + E KI L
Sbjct: 75 MRSSDCPYIVQFYGALFREGDCWICME-LMSTSFDKFYKYVYSVLDDVIPEEILGKITLA 133
Query: 448 TARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG---Y 504
T + + H+ K H +IK SN+L+++ + + DFG++ + +R AG Y
Sbjct: 134 TVKALNHLKE--NLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCRPY 191
Query: 505 RAPEVIE----TRKHSHKSDVYSFGVLLLEMLTGKAP 537
APE I+ + + +SDV+S G+ L E+ TG+ P
Sbjct: 192 MAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFP 228
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 94/218 (43%), Gaps = 26/218 (11%)
Query: 343 AEVLGKGSYGTAYKAV-LEESTTXXXXXXXXXXXXXRDFEQQMEIVGRV-----GQHPNV 396
+VLG G++GT YK + + E T + +E + HP++
Sbjct: 43 VKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHL 102
Query: 397 VPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRG--AGRTPLDWETRVKILLGTARGVAH 454
V L S +L V G L +H ++ + L+W ++ A+G+ +
Sbjct: 103 VRLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQI------AKGMMY 155
Query: 455 IHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAGYRAP------E 508
+ + H ++ A NVL+ I+DFGL L+ + G + P E
Sbjct: 156 LEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALE 212
Query: 509 VIETRKHSHKSDVYSFGVLLLEMLT--GKAPLQSPTRD 544
I RK +H+SDV+S+GV + E++T GK PTR+
Sbjct: 213 CIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTRE 250
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 97/219 (44%), Gaps = 28/219 (12%)
Query: 343 AEVLGKGSYGTAYKAV-------LEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPN 395
+VLG G++GT YK + ++ ++ + ++ VG P
Sbjct: 22 VKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGS-PY 80
Query: 396 VVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRG--AGRTPLDWETRVKILLGTARGVA 453
V L + +L V G L + NRG + L+W ++ A+G++
Sbjct: 81 VSRLLGICLTSTVQL-VTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQI------AKGMS 133
Query: 454 HIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAGYRAP------ 507
++ + + H ++ A NVL+ I+DFGL L+++ T + G + P
Sbjct: 134 YLEDV---RLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMAL 190
Query: 508 EVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQS-PTRD 544
E I R+ +H+SDV+S+GV + E++T G P P R+
Sbjct: 191 ESILRRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPARE 229
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 82/170 (48%), Gaps = 21/170 (12%)
Query: 382 QQMEIVGRVGQ---------HPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAG 432
+ +++VG++ + HP+++ L + + +V +Y + G L + N G
Sbjct: 55 RSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKN---G 111
Query: 433 RTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM 492
R LD + ++ GV + H H ++K NVL++ ++ I+DFGL+ +M
Sbjct: 112 R--LDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMM 166
Query: 493 NVPATPSRSAG---YRAPEVIETRKHSH-KSDVYSFGVLLLEMLTGKAPL 538
+ S G Y APEVI R ++ + D++S GV+L +L G P
Sbjct: 167 SDGEFLRXSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPF 216
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 78/170 (45%), Gaps = 25/170 (14%)
Query: 380 FEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLL-----HGNRGAGRT 434
E ++ ++ ++ +HPN+V L Y S L+ + G L + + R A R
Sbjct: 63 MENEIAVLHKI-KHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR- 120
Query: 435 PLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVL---INQDLDGCISDFGLTPL 491
++ V ++H +G H ++K N+L +++D ISDFGL+ +
Sbjct: 121 ---------LIFQVLDAVKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKM 168
Query: 492 MN---VPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPL 538
+ V +T + GY APEV+ + +S D +S GV+ +L G P
Sbjct: 169 EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF 218
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 52/89 (58%), Gaps = 5/89 (5%)
Query: 450 RGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPS-RSAGYRAPE 508
+G+ +IHS G H ++K N+ +N+D + I DFGL + T + YRAPE
Sbjct: 137 KGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWYRAPE 193
Query: 509 VIETRKHSHKS-DVYSFGVLLLEMLTGKA 536
VI + H +++ D++S G ++ EMLTGK
Sbjct: 194 VILSWMHYNQTVDIWSVGCIMAEMLTGKT 222
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 78/170 (45%), Gaps = 25/170 (14%)
Query: 380 FEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLL-----HGNRGAGRT 434
E ++ ++ ++ +HPN+V L Y S L+ + G L + + R A R
Sbjct: 63 MENEIAVLHKI-KHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR- 120
Query: 435 PLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVL---INQDLDGCISDFGLTPL 491
++ V ++H +G H ++K N+L +++D ISDFGL+ +
Sbjct: 121 ---------LIFQVLDAVKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKM 168
Query: 492 MN---VPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPL 538
+ V +T + GY APEV+ + +S D +S GV+ +L G P
Sbjct: 169 EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF 218
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 78/169 (46%), Gaps = 25/169 (14%)
Query: 381 EQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLL-----HGNRGAGRTP 435
E ++ ++ ++ +HPN+V L Y S L+ + G L + + R A R
Sbjct: 64 ENEIAVLHKI-KHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR-- 120
Query: 436 LDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVL---INQDLDGCISDFGLTPLM 492
++ V ++H +G H ++K N+L +++D ISDFGL+ +
Sbjct: 121 --------LIFQVLDAVKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKME 169
Query: 493 N---VPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPL 538
+ V +T + GY APEV+ + +S D +S GV+ +L G P
Sbjct: 170 DPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF 218
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 60/109 (55%), Gaps = 7/109 (6%)
Query: 450 RGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSA-GYRAPE 508
RG+ +IHS G H ++K SNV +N+D + I DFGL + T + YRAPE
Sbjct: 134 RGLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYVATRWYRAPE 190
Query: 509 VIETRKHSHKS-DVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSV 556
++ H +++ D++S G ++ E+L GKA P D + L R ++ V
Sbjct: 191 IMLNWMHYNQTVDIWSVGCIMAELLQGKALF--PGSDYIDQLKRIMEVV 237
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 91/221 (41%), Gaps = 42/221 (19%)
Query: 344 EVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRV--GQHPNVVPL-- 399
E++G+G YG YK L+E ++F + I RV +H N+
Sbjct: 19 ELIGRGRYGAVYKGSLDERPVAVKVFSFANR---QNFINEKNIY-RVPLMEHDNIARFIV 74
Query: 400 ---RAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIH 456
R + E LLV +Y+ +GSL L + DW + ++ RG+A++H
Sbjct: 75 GDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS------DWVSSCRLAHSVTRGLAYLH 128
Query: 457 S------MGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM------------NVPATP 498
+ P +H ++ + NVL+ D ISDFGL+ + N +
Sbjct: 129 TELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISE 188
Query: 499 SRSAGYRAPEVIE-------TRKHSHKSDVYSFGVLLLEML 532
+ Y APEV+E + D+Y+ G++ E+
Sbjct: 189 VGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 52/89 (58%), Gaps = 5/89 (5%)
Query: 450 RGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPS-RSAGYRAPE 508
+G+ +IHS G H ++K N+ +N+D + I DFGL + T + YRAPE
Sbjct: 155 KGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWYRAPE 211
Query: 509 VIETRKHSHKS-DVYSFGVLLLEMLTGKA 536
VI + H +++ D++S G ++ EMLTGK
Sbjct: 212 VILSWMHYNQTVDIWSVGCIMAEMLTGKT 240
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 51/104 (49%), Gaps = 10/104 (9%)
Query: 436 LDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGL-----TP 490
LD E +L G+ H+HS G H ++K SN+++ D I DFGL T
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 179
Query: 491 LMNVPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTG 534
M P +R YRAPEVI + D++S G ++ EM+ G
Sbjct: 180 FMMTPEVVTRY--YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 51/104 (49%), Gaps = 10/104 (9%)
Query: 436 LDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGL-----TP 490
LD E +L G+ H+HS G H ++K SN+++ D I DFGL T
Sbjct: 124 LDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 180
Query: 491 LMNVPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTG 534
M P +R YRAPEVI + D++S G ++ EM+ G
Sbjct: 181 FMMTPYVVTRY--YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 78/170 (45%), Gaps = 25/170 (14%)
Query: 380 FEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLL-----HGNRGAGRT 434
E ++ ++ ++ +HPN+V L Y S L+ + G L + + R A R
Sbjct: 63 MENEIAVLHKI-KHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR- 120
Query: 435 PLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVL---INQDLDGCISDFGLTPL 491
++ V ++H +G H ++K N+L +++D ISDFGL+ +
Sbjct: 121 ---------LIFQVLDAVKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKM 168
Query: 492 MN---VPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPL 538
+ V +T + GY APEV+ + +S D +S GV+ +L G P
Sbjct: 169 EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF 218
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 94/204 (46%), Gaps = 19/204 (9%)
Query: 344 EVLGKGSYG-----TAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVP 398
E LG+GS+G T YK + + E+++ + ++ +HP+++
Sbjct: 15 ETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYL-KLLRHPHIIK 73
Query: 399 LRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSM 458
L + + ++V +Y A G L + + R D R + A H H
Sbjct: 74 LYDVITTPTDIVMVIEY-AGGELFDYIVEKK---RMTEDEGRRFFQQIICAIEYCHRH-- 127
Query: 459 GGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM---NVPATPSRSAGYRAPEVIETRKH 515
K H ++K N+L++ +L+ I+DFGL+ +M N T S Y APEVI + +
Sbjct: 128 ---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLY 184
Query: 516 SH-KSDVYSFGVLLLEMLTGKAPL 538
+ + DV+S G++L ML G+ P
Sbjct: 185 AGPEVDVWSCGIVLYVMLVGRLPF 208
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 51/104 (49%), Gaps = 10/104 (9%)
Query: 436 LDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGL-----TP 490
LD E +L G+ H+HS G H ++K SN+++ D I DFGL T
Sbjct: 123 LDHERMSYLLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAGTS 179
Query: 491 LMNVPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTG 534
M P +R YRAPEVI + D++S G ++ EM+ G
Sbjct: 180 FMMTPYVVTRY--YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 51/104 (49%), Gaps = 10/104 (9%)
Query: 436 LDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGL-----TP 490
LD E +L G+ H+HS G H ++K SN+++ D I DFGL T
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 179
Query: 491 LMNVPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTG 534
M P +R YRAPEVI + D++S G ++ EM+ G
Sbjct: 180 FMMTPYVVTRY--YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 51/104 (49%), Gaps = 10/104 (9%)
Query: 436 LDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGL-----TP 490
LD E +L G+ H+HS G H ++K SN+++ D I DFGL T
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 179
Query: 491 LMNVPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTG 534
M P +R YRAPEVI + D++S G ++ EM+ G
Sbjct: 180 FMMTPYVVTRY--YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 51/104 (49%), Gaps = 10/104 (9%)
Query: 436 LDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGL-----TP 490
LD E +L G+ H+HS G H ++K SN+++ D I DFGL T
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 179
Query: 491 LMNVPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTG 534
M P +R YRAPEVI + D++S G ++ EM+ G
Sbjct: 180 FMMTPYVVTRY--YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 55/114 (48%), Gaps = 12/114 (10%)
Query: 436 LDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGL-----TP 490
LD E +L G+ H+HS G H ++K SN+++ D I DFGL T
Sbjct: 123 LDHERMSYLLYQMLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTS 179
Query: 491 LMNVPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRD 544
M P +R YRAPEVI + D++S G ++ EM+ K + P RD
Sbjct: 180 FMMTPYVVTRY--YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK--ILFPGRD 229
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 89/207 (42%), Gaps = 25/207 (12%)
Query: 343 AEVLGKGSYGTAYKA--------VLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHP 394
E +G+G+YG YKA V + R+ E+ HP
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-----NHP 65
Query: 395 NVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAH 454
N+V L +++++ LV++ F L T + + G PL L +G+A
Sbjct: 66 NIVKLLDVIHTENKLYLVFE-FLHQDLKTFMDASALTG-IPLPLIK--SYLFQLLQGLAF 121
Query: 455 IHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR----SAGYRAPEV- 509
HS + H ++K N+LIN + ++DFGL VP + YRAPE+
Sbjct: 122 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 178
Query: 510 IETRKHSHKSDVYSFGVLLLEMLTGKA 536
+ + +S D++S G + EM+T +A
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRRA 205
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 55/114 (48%), Gaps = 12/114 (10%)
Query: 436 LDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGL-----TP 490
LD E +L G+ H+HS G H ++K SN+++ D I DFGL T
Sbjct: 123 LDHERMSYLLYQMLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTS 179
Query: 491 LMNVPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRD 544
M P +R YRAPEVI + D++S G ++ EM+ K + P RD
Sbjct: 180 FMMTPYVVTRY--YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK--ILFPGRD 229
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 55/114 (48%), Gaps = 12/114 (10%)
Query: 436 LDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGL-----TP 490
LD E +L G+ H+HS G H ++K SN+++ D I DFGL T
Sbjct: 116 LDHERMSYLLYQMLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTS 172
Query: 491 LMNVPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRD 544
M P +R YRAPEVI + D++S G ++ EM+ K + P RD
Sbjct: 173 FMMTPYVVTRY--YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK--ILFPGRD 222
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 143/334 (42%), Gaps = 65/334 (19%)
Query: 305 EKPKEEFGSGVQEPEKNKLVFFEGCSYNFDLEDLLRASA-EVLGKGSYGTAYKAVLEEST 363
E PK EF P KN LV + + +++A+A + G+ Y T +L+E+
Sbjct: 14 EDPKWEF------PRKN-LVLGKTLGEG-EFGKVVKATAFHLKGRAGYTTVAVKMLKENA 65
Query: 364 TXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLST 423
+ RD + ++ +V HP+V+ L LL+ +Y GSL
Sbjct: 66 SPSEL---------RDLLSEFNVLKQV-NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRG 115
Query: 424 LLHGNRGAG-----------RTPLDWETRVKILLG--------TARGVAHIHSMGGPKFT 464
L +R G + LD + +G ++G+ ++ M K
Sbjct: 116 FLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLV 172
Query: 465 HGNIKASNVLINQDLDGCISDFGLT-PLMNVPATPSRSAG-----YRAPEVIETRKHSHK 518
H ++ A N+L+ + ISDFGL+ + + RS G + A E + ++ +
Sbjct: 173 HRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQ 232
Query: 519 SDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNIE 577
SDV+SFGVLL E++T G P + + +L +++ R E R N
Sbjct: 233 SDVWSFGVLLWEIVTLGGNPYPGIPPERLFNL---LKTGHRME-----------RPDNCS 278
Query: 578 EEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEV 611
EEM +++ + C + PD RP ++ + +E++
Sbjct: 279 EEMYRLM---LQCWKQEPDKRPVFADISKDLEKM 309
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 96/212 (45%), Gaps = 29/212 (13%)
Query: 346 LGKGSYGTAYKAVLEESTTXXXXXX---------XXXXXXXRDFEQQMEIVGRVGQHPNV 396
+GKG +G +K L + + ++F++++ I+ + HPN+
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNL-NHPNI 85
Query: 397 VPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIH 456
V L Y + +V ++ G L L P+ W +++++L A G+ ++
Sbjct: 86 VKL--YGLMHNPPRMVMEFVPCGDLYHRLLDKA----HPIKWSVKLRLMLDIALGIEYMQ 139
Query: 457 SMGGPKFTHGNIKASNVLINQDLD------GCISDFGLTPLMNVPATPSRSAGYR--APE 508
+ P H ++++ N+ + Q LD ++DFG T +V + ++ APE
Sbjct: 140 NQN-PPIVHRDLRSPNIFL-QSLDENAPVCAKVADFG-TSQQSVHSVSGLLGNFQWMAPE 196
Query: 509 VI--ETRKHSHKSDVYSFGVLLLEMLTGKAPL 538
I E ++ K+D YSF ++L +LTG+ P
Sbjct: 197 TIGAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 51/104 (49%), Gaps = 10/104 (9%)
Query: 436 LDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGL-----TP 490
LD E +L G+ H+HS G H ++K SN+++ D I DFGL T
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAGTS 179
Query: 491 LMNVPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTG 534
M P +R YRAPEVI + D++S G ++ EM+ G
Sbjct: 180 FMMTPYVVTRY--YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 82/198 (41%), Gaps = 17/198 (8%)
Query: 346 LGKGSYG---TAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAY 402
+G G+ G AY A+LE + + ++ +V H N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV 91
Query: 403 YYSKDEKLLVYDYFASGSLSTLLHGNRG-AGRTPLDWETRVKILLGTARGVAHIHSMGGP 461
+ + D + + L+ N + LD E +L G+ H+HS G
Sbjct: 92 FTPQKSLEEFQDVYI---VMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAG-- 146
Query: 462 KFTHGNIKASNVLINQDLDGCISDFGL-----TPLMNVPATPSRSAGYRAPEVIETRKHS 516
H ++K SN+++ D I DFGL T M P +R YRAPEVI +
Sbjct: 147 -IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILGMGYK 203
Query: 517 HKSDVYSFGVLLLEMLTG 534
D++S G ++ EM+ G
Sbjct: 204 ENVDIWSVGCIMGEMIKG 221
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 79/177 (44%), Gaps = 27/177 (15%)
Query: 393 HPNVVPLRAYYYSKDEKLLVYDYFASGSL-STLLHGNRGAGRTPLDWETRVKILLGTARG 451
HPN++ L ++ K LV + + G L ++H R + I+ G
Sbjct: 95 HPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIH------RMKFNEVDAAVIIKQVLSG 148
Query: 452 VAHIHSMGGPKFTHGNIKASNVLI-NQDLDGCIS--DFGLTPLM-NVPATPSR--SAGYR 505
V ++H H ++K N+L+ +++ D I DFGL+ + N R +A Y
Sbjct: 149 VTYLHKHN---IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYI 205
Query: 506 APEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMV----------DLPRW 552
APEV+ +K+ K DV+S GV+L +L G P T +++ D P W
Sbjct: 206 APEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEW 261
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 71/161 (44%), Gaps = 15/161 (9%)
Query: 393 HPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGV 452
HPN++ L + K LV +++ G L + R D I+ G+
Sbjct: 105 HPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQI-----INRHKFDECDAANIMKQILSGI 159
Query: 453 AHIHSMGGPKFTHGNIKASNVLI---NQDLDGCISDFGLTPLMNVPATPSRSAG---YRA 506
++H H +IK N+L+ N L+ I DFGL+ + G Y A
Sbjct: 160 CYLHKHN---IVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIA 216
Query: 507 PEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMV 547
PEV++ +K++ K DV+S GV++ +L G P D++
Sbjct: 217 PEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDII 256
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 78/176 (44%), Gaps = 29/176 (16%)
Query: 380 FEQQMEIVGRVGQHPNVVPLRAYYYSKDEK--LLVYDYFASGSLSTLLHGNRGAGRTPLD 437
++Q+++I+ R H +++ + + EK LV +Y GSL L R +
Sbjct: 63 WKQEIDIL-RTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL------PRHSIG 115
Query: 438 WETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPAT 497
+ G+A++HS + H N+ A NVL++ D I DFGL A
Sbjct: 116 LAQLLLFAQQICEGMAYLHSQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAK-----AV 167
Query: 498 PSRSAGYR------------APEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSP 541
P YR APE ++ K + SDV+SFGV L E+LT QSP
Sbjct: 168 PEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSP 223
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 89/207 (42%), Gaps = 25/207 (12%)
Query: 343 AEVLGKGSYGTAYKA--------VLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHP 394
E +G+G+YG YKA V + R+ E+ HP
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-----NHP 63
Query: 395 NVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAH 454
N+V L +++++ LV++ F S L + + G PL L +G+A
Sbjct: 64 NIVKLLDVIHTENKLYLVFE-FLSMDLKKFMDASALTG-IPLPLIK--SYLFQLLQGLAF 119
Query: 455 IHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR----SAGYRAPEV- 509
HS + H ++K N+LIN + ++DFGL VP + YRAPE+
Sbjct: 120 CHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 176
Query: 510 IETRKHSHKSDVYSFGVLLLEMLTGKA 536
+ + +S D++S G + EM+T +A
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRRA 203
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 60/109 (55%), Gaps = 7/109 (6%)
Query: 450 RGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSA-GYRAPE 508
RG+ +IHS G H ++K SNV +N+D + I DFGL + T + YRAPE
Sbjct: 142 RGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATRWYRAPE 198
Query: 509 VIETRKHSHKS-DVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSV 556
++ H +++ D++S G ++ E+L GKA P D + L R ++ V
Sbjct: 199 IMLNWMHYNQTVDIWSVGCIMAELLQGKALF--PGSDYIDQLKRIMEVV 245
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 89/207 (42%), Gaps = 25/207 (12%)
Query: 343 AEVLGKGSYGTAYKA--------VLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHP 394
E +G+G+YG YKA V + R+ E+ HP
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-----NHP 65
Query: 395 NVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAH 454
N+V L +++++ LV++ F S L + + G PL L +G+A
Sbjct: 66 NIVKLLDVIHTENKLYLVFE-FLSMDLKKFMDASALTG-IPLPLIK--SYLFQLLQGLAF 121
Query: 455 IHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR----SAGYRAPEV- 509
HS + H ++K N+LIN + ++DFGL VP + YRAPE+
Sbjct: 122 CHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 178
Query: 510 IETRKHSHKSDVYSFGVLLLEMLTGKA 536
+ + +S D++S G + EM+T +A
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRRA 205
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 107/258 (41%), Gaps = 35/258 (13%)
Query: 378 RDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS-GSLSTLLHGNRGA---GR 433
R +++I+ +G H NVV L L+V F G+LST L R +
Sbjct: 76 RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 135
Query: 434 TPLDW-------ETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDF 486
TP D E + A+G+ + S K H ++ A N+L+++ I DF
Sbjct: 136 TPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDF 192
Query: 487 GLTPLMNVPATPSRSAGYR------APEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQS 540
GL + R R APE I R ++ +SDV+SFGVLL E+ + A S
Sbjct: 193 GLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGA---S 249
Query: 541 PTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPN 600
P +D EE+ + + MR + +M Q + C P RP
Sbjct: 250 PYPGVKID----------EEFCRRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPT 297
Query: 601 MDEVVRMIEEVRQSDSEN 618
E+V + + Q++++
Sbjct: 298 FSELVEHLGNLLQANAQQ 315
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 143/334 (42%), Gaps = 65/334 (19%)
Query: 305 EKPKEEFGSGVQEPEKNKLVFFEGCSYNFDLEDLLRASA-EVLGKGSYGTAYKAVLEEST 363
E PK EF P KN LV + + +++A+A + G+ Y T +L+E+
Sbjct: 14 EDPKWEF------PRKN-LVLGKTLGEG-EFGKVVKATAFHLKGRAGYTTVAVKMLKENA 65
Query: 364 TXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLST 423
+ RD + ++ +V HP+V+ L LL+ +Y GSL
Sbjct: 66 SPSEL---------RDLLSEFNVLKQV-NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRG 115
Query: 424 LLHGNRGAG-----------RTPLDWETRVKILLG--------TARGVAHIHSMGGPKFT 464
L +R G + LD + +G ++G+ ++ M K
Sbjct: 116 FLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLV 172
Query: 465 HGNIKASNVLINQDLDGCISDFGLT-PLMNVPATPSRSAG-----YRAPEVIETRKHSHK 518
H ++ A N+L+ + ISDFGL+ + + RS G + A E + ++ +
Sbjct: 173 HRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQ 232
Query: 519 SDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNIE 577
SDV+SFGVLL E++T G P + + +L +++ R E R N
Sbjct: 233 SDVWSFGVLLWEIVTLGGNPYPGIPPERLFNL---LKTGHRME-----------RPDNCS 278
Query: 578 EEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEV 611
EEM +++ + C + PD RP ++ + +E++
Sbjct: 279 EEMYRLM---LQCWKQEPDKRPVFADISKDLEKM 309
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 81/169 (47%), Gaps = 17/169 (10%)
Query: 378 RDFEQQMEIVGRVGQHPNVVPLRAYYYS--KDEKLLVYDYFASGSLSTLLHGNRGAGRTP 435
RDF ++ + R+ HPNV+P+ S L+ + GSL +LH G
Sbjct: 52 RDFNEECPRL-RIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLH--EGTNFV- 107
Query: 436 LDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCIS------DFGLT 489
+D VK L ARG+A +H++ P + + +V+I++D+ IS F
Sbjct: 108 VDQSQAVKFALDMARGMAFLHTLE-PLIPRHALNSRSVMIDEDMTARISMADVKFSFQSP 166
Query: 490 PLMNVPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPL 538
M PA + A + PE +T + S +D++SF VLL E++T + P
Sbjct: 167 GRMYAPAWVAPEALQKKPE--DTNRRS--ADMWSFAVLLWELVTREVPF 211
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 92/232 (39%), Gaps = 40/232 (17%)
Query: 337 DLLRASAEVLGKGSYGTAYKA---------------VLEESTTXXXXXXXXXXXXXRDFE 381
+LLR VLGKG YG ++ VL+++ R+
Sbjct: 20 ELLR----VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNIL 75
Query: 382 QQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWE-T 440
+++ +HP +V L + + + L+ +Y + G L L R + E T
Sbjct: 76 EEV-------KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLE------REGIFMEDT 122
Query: 441 RVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM----NVPA 496
L + + H+H G + ++K N+++N ++DFGL V
Sbjct: 123 ACFYLAEISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTH 179
Query: 497 TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVD 548
T + Y APE++ H+ D +S G L+ +MLTG P R +D
Sbjct: 180 TFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTID 231
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 60/109 (55%), Gaps = 7/109 (6%)
Query: 450 RGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSA-GYRAPE 508
RG+ +IHS G H ++K SNV +N+D + I DFGL + T + YRAPE
Sbjct: 142 RGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATRWYRAPE 198
Query: 509 VIETRKHSHKS-DVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSV 556
++ H +++ D++S G ++ E+L GKA P D + L R ++ V
Sbjct: 199 IMLNWMHYNQTVDIWSVGCIMAELLQGKALF--PGSDYIDQLKRIMEVV 245
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 55/114 (48%), Gaps = 12/114 (10%)
Query: 436 LDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGL-----TP 490
LD E +L G+ H+HS G H ++K SN+++ D I DFGL T
Sbjct: 161 LDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 217
Query: 491 LMNVPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRD 544
M P +R YRAPEVI + D++S G ++ EM+ K + P RD
Sbjct: 218 FMMTPYVVTRY--YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK--ILFPGRD 267
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 89/207 (42%), Gaps = 25/207 (12%)
Query: 343 AEVLGKGSYGTAYKA--------VLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHP 394
E +G+G+YG YKA V + R+ E+ HP
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-----NHP 65
Query: 395 NVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAH 454
N+V L +++++ LV++ F S L + + G PL L +G+A
Sbjct: 66 NIVKLLDVIHTENKLYLVFE-FLSMDLKDFMDASALTG-IPLPLIK--SYLFQLLQGLAF 121
Query: 455 IHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR----SAGYRAPEV- 509
HS + H ++K N+LIN + ++DFGL VP + YRAPE+
Sbjct: 122 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 178
Query: 510 IETRKHSHKSDVYSFGVLLLEMLTGKA 536
+ + +S D++S G + EM+T +A
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRRA 205
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 89/207 (42%), Gaps = 25/207 (12%)
Query: 343 AEVLGKGSYGTAYKA--------VLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHP 394
E +G+G+YG YKA V + R+ E+ HP
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-----NHP 64
Query: 395 NVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAH 454
N+V L +++++ LV++ F S L + + G PL L +G+A
Sbjct: 65 NIVKLLDVIHTENKLYLVFE-FLSMDLKDFMDASALTG-IPLPLIK--SYLFQLLQGLAF 120
Query: 455 IHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR----SAGYRAPEV- 509
HS + H ++K N+LIN + ++DFGL VP + YRAPE+
Sbjct: 121 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 177
Query: 510 IETRKHSHKSDVYSFGVLLLEMLTGKA 536
+ + +S D++S G + EM+T +A
Sbjct: 178 LGCKYYSTAVDIWSLGCIFAEMVTRRA 204
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 67/157 (42%), Gaps = 17/157 (10%)
Query: 393 HPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLL--HGNRGAGRTPLDWETRVKILLGTAR 450
H N+V + D LV +Y +LS + HG PL +T +
Sbjct: 70 HQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHG-------PLSVDTAINFTNQILD 122
Query: 451 GVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR-----SAGYR 505
G+ H H M + H +IK N+LI+ + I DFG+ ++ + + Y
Sbjct: 123 GIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYF 179
Query: 506 APEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPT 542
+PE + +D+YS G++L EML G+ P T
Sbjct: 180 SPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGET 216
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 55/114 (48%), Gaps = 12/114 (10%)
Query: 436 LDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGL-----TP 490
LD E +L G+ H+HS G H ++K SN+++ D I DFGL T
Sbjct: 161 LDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 217
Query: 491 LMNVPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRD 544
M P +R YRAPEVI + D++S G ++ EM+ K + P RD
Sbjct: 218 FMMTPYVVTRY--YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK--ILFPGRD 267
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 55/114 (48%), Gaps = 12/114 (10%)
Query: 436 LDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGL-----TP 490
LD E +L G+ H+HS G H ++K SN+++ D I DFGL T
Sbjct: 124 LDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 180
Query: 491 LMNVPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRD 544
M P +R YRAPEVI + D++S G ++ EM+ K + P RD
Sbjct: 181 FMMTPYVVTRY--YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK--ILFPGRD 230
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 55/114 (48%), Gaps = 12/114 (10%)
Query: 436 LDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGL-----TP 490
LD E +L G+ H+HS G H ++K SN+++ D I DFGL T
Sbjct: 116 LDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 172
Query: 491 LMNVPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRD 544
M P +R YRAPEVI + D++S G ++ EM+ K + P RD
Sbjct: 173 FMMTPYVVTRY--YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK--ILFPGRD 222
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 55/114 (48%), Gaps = 12/114 (10%)
Query: 436 LDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGL-----TP 490
LD E +L G+ H+HS G H ++K SN+++ D I DFGL T
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 179
Query: 491 LMNVPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRD 544
M P +R YRAPEVI + D++S G ++ EM+ K + P RD
Sbjct: 180 FMMTPYVVTRY--YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK--ILFPGRD 229
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 55/114 (48%), Gaps = 12/114 (10%)
Query: 436 LDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGL-----TP 490
LD E +L G+ H+HS G H ++K SN+++ D I DFGL T
Sbjct: 117 LDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 173
Query: 491 LMNVPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRD 544
M P +R YRAPEVI + D++S G ++ EM+ K + P RD
Sbjct: 174 FMMTPYVVTRY--YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK--ILFPGRD 223
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 91/207 (43%), Gaps = 24/207 (11%)
Query: 346 LGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVG-RVGQHPNVVPLRAYYY 404
+G G++G A + + ++ T D Q EI+ R +HPN+V +
Sbjct: 28 IGSGNFGVA-RLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVIL 86
Query: 405 SKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFT 464
+ ++ +Y + G L + AGR D E R GV++ HSM +
Sbjct: 87 TPTHLAIIMEYASGGELYERIC---NAGRFSED-EARF-FFQQLLSGVSYCHSM---QIC 138
Query: 465 HGNIKASNVLINQDLDGC------ISDFGLTPLMNVPATPSRSAG---YRAPEVIETRKH 515
H ++K N L LDG I DFG + + + P + G Y APEV+ +++
Sbjct: 139 HRDLKLENTL----LDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQEY 194
Query: 516 SHK-SDVYSFGVLLLEMLTGKAPLQSP 541
K +DV+S GV L ML G P + P
Sbjct: 195 DGKIADVWSCGVTLYVMLVGAYPFEDP 221
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 106/242 (43%), Gaps = 28/242 (11%)
Query: 311 FGSGVQEPE--KNKLVFFEGCSYNFDLEDLLRASAEVLGKGSYGTAYKAV--LEESTTXX 366
F S +PE K+K +F + ++LL A E LG G++G+ + V + +
Sbjct: 315 FESPFSDPEELKDKKLFLKR-------DNLLIADIE-LGCGNFGSVRQGVYRMRKKQIDV 366
Query: 367 XXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKL-LVYDYFASGSLSTLL 425
D E+ M + Q N +R + E L LV + G L L
Sbjct: 367 AIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLVMEMAGGGPLHKFL 426
Query: 426 HGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISD 485
G R P+ ++L + G+ ++ F H N+ A NVL+ ISD
Sbjct: 427 VGKRE--EIPVS--NVAELLHQVSMGMKYLEEKN---FVHRNLAARNVLLVNRHYAKISD 479
Query: 486 FGLTPLMNVPAT--PSRSAG-----YRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAP 537
FGL+ + + +RSAG + APE I RK S +SDV+S+GV + E L+ G+ P
Sbjct: 480 FGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKP 539
Query: 538 LQ 539
+
Sbjct: 540 YK 541
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 55/114 (48%), Gaps = 12/114 (10%)
Query: 436 LDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGL-----TP 490
LD E +L G+ H+HS G H ++K SN+++ D I DFGL T
Sbjct: 122 LDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 178
Query: 491 LMNVPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRD 544
M P +R YRAPEVI + D++S G ++ EM+ K + P RD
Sbjct: 179 FMMTPYVVTRY--YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK--ILFPGRD 228
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 55/114 (48%), Gaps = 12/114 (10%)
Query: 436 LDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGL-----TP 490
LD E +L G+ H+HS G H ++K SN+++ D I DFGL T
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 179
Query: 491 LMNVPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRD 544
M P +R YRAPEVI + D++S G ++ EM+ K + P RD
Sbjct: 180 FMMTPYVVTRY--YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK--ILFPGRD 229
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 55/114 (48%), Gaps = 12/114 (10%)
Query: 436 LDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGL-----TP 490
LD E +L G+ H+HS G H ++K SN+++ D I DFGL T
Sbjct: 117 LDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 173
Query: 491 LMNVPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRD 544
M P +R YRAPEVI + D++S G ++ EM+ K + P RD
Sbjct: 174 FMMTPYVVTRY--YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK--ILFPGRD 223
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 55/114 (48%), Gaps = 12/114 (10%)
Query: 436 LDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGL-----TP 490
LD E +L G+ H+HS G H ++K SN+++ D I DFGL T
Sbjct: 124 LDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 180
Query: 491 LMNVPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRD 544
M P +R YRAPEVI + D++S G ++ EM+ K + P RD
Sbjct: 181 FMMTPYVVTRY--YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK--ILFPGRD 230
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 69/148 (46%), Gaps = 11/148 (7%)
Query: 393 HPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLG-TARG 451
HP ++ + + + ++ DY G L +LL R + R P K
Sbjct: 65 HPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLL---RKSQRFP---NPVAKFYAAEVCLA 118
Query: 452 VAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM-NVPATPSRSAGYRAPEVI 510
+ ++HS + ++K N+L++++ I+DFG + +V + Y APEV+
Sbjct: 119 LEYLHS---KDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYXLCGTPDYIAPEVV 175
Query: 511 ETRKHSHKSDVYSFGVLLLEMLTGKAPL 538
T+ ++ D +SFG+L+ EML G P
Sbjct: 176 STKPYNKSIDWWSFGILIYEMLAGYTPF 203
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 120/304 (39%), Gaps = 51/304 (16%)
Query: 344 EVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVG-QHPNVVPLRAY 402
E+ +G +G +KA L + ++ + EI G +H N++ A
Sbjct: 21 EIKARGRFGCVWKAQL---MNDFVAVKIFPLQDKQSWQSEREIFSTPGMKHENLLQFIAA 77
Query: 403 YYS----KDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHS- 457
+ E L+ + GSL+ L GN + W + +RG++++H
Sbjct: 78 EKRGSNLEVELWLITAFHDKGSLTDYLKGN------IITWNELCHVAETMSRGLSYLHED 131
Query: 458 -------MGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG------Y 504
P H + K+ NVL+ DL ++DFGL P + G Y
Sbjct: 132 VPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRY 191
Query: 505 RAPEVIE-----TRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVRE 559
APEV+E R + D+Y+ G++L E+++ P + M LP
Sbjct: 192 MAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAADGPVDEYM--LP--------- 240
Query: 560 EWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMR-PNMDEVVRMIEEVRQSDSEN 618
F+ E+ + ++EE ++ M K ++ P + ++ IEE D+E
Sbjct: 241 ------FEEEIGQHPSLEELQEVVVHKKMRPTIKDHWLKHPGLAQLCVTIEECWDHDAEA 294
Query: 619 RPSS 622
R S+
Sbjct: 295 RLSA 298
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 53/115 (46%), Gaps = 10/115 (8%)
Query: 436 LDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGL-----TP 490
LD E +L G+ H+HS G H ++K SN+++ D I DFGL T
Sbjct: 121 LDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTASTN 177
Query: 491 LMNVPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDD 545
M P +R YRAPEVI + D++S G ++ E++ G Q D
Sbjct: 178 FMMTPYVVTRY--YRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHID 230
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 55/114 (48%), Gaps = 12/114 (10%)
Query: 436 LDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGL-----TP 490
LD E +L G+ H+HS G H ++K SN+++ D I DFGL T
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTS 179
Query: 491 LMNVPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRD 544
M P +R YRAPEVI + D++S G ++ EM+ K + P RD
Sbjct: 180 FMMTPYVVTRY--YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK--ILFPGRD 229
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 120/288 (41%), Gaps = 47/288 (16%)
Query: 346 LGKGSYGTAYKA-----VLEESTTXXXXXXXXXXXXXRD---FEQQMEIVGRVGQHPNVV 397
LG+GS+G Y+ + E+ T R+ F + ++ H +VV
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HVV 84
Query: 398 PLRAYYYSKDEKLLVYDYFASGSLSTLLHGNR-----GAGRTPLDWETRVKILLGTARGV 452
L L+V + A G L + L R GR P + +++ A G+
Sbjct: 85 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 144
Query: 453 AHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG--------Y 504
A++++ KF H N+ A N ++ D I DFG+T ++ T G +
Sbjct: 145 AYLNA---KKFVHRNLAARNCMVAHDFTVKIGDFGMT--RDIYETDYYRKGGKGLLPVRW 199
Query: 505 RAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTA 563
APE ++ + SD++SFGV+L E+ + + P Q + + ++
Sbjct: 200 MAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF-------------- 245
Query: 564 EVFD-VELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEE 610
V D L + N E + ++++ C P+MRP E+V ++++
Sbjct: 246 -VMDGGYLDQPDNCPERVTDLMRM---CWQFNPNMRPTFLEIVNLLKD 289
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 55/114 (48%), Gaps = 12/114 (10%)
Query: 436 LDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGL-----TP 490
LD E +L G+ H+HS G H ++K SN+++ D I DFGL T
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 179
Query: 491 LMNVPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRD 544
M P +R YRAPEVI + D++S G ++ EM+ K + P RD
Sbjct: 180 FMMEPEVVTRY--YRAPEVILGMGYKENVDIWSVGCIMGEMVCHK--ILFPGRD 229
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 55/114 (48%), Gaps = 12/114 (10%)
Query: 436 LDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGL-----TP 490
LD E +L G+ H+HS G H ++K SN+++ D I DFGL T
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTS 179
Query: 491 LMNVPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRD 544
M P +R YRAPEVI + D++S G ++ EM+ K + P RD
Sbjct: 180 FMMTPYVVTRY--YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK--ILFPGRD 229
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 115/297 (38%), Gaps = 42/297 (14%)
Query: 346 LGKGSYGTAYKA--------VLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVV 397
LG+G++G +A + R +++I+ +G H NVV
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 398 PLRAYYYSKDEKLLVYDYFAS-GSLSTLLHGNRGA---------GRTPLDWETRVKILLG 447
L L+V F G+LST L R + L E +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQ 156
Query: 448 TARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAGYR-- 505
A+G+ + S K H ++ A N+L+++ I DFGL + R R
Sbjct: 157 VAKGMEFLASR---KXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 213
Query: 506 ----APEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEW 561
APE I R ++ +SDV+SFGVLL E+ + A SP +D EE+
Sbjct: 214 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGA---SPYPGVKID----------EEF 260
Query: 562 TAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSEN 618
+ + MR + +M Q + C P RP E+V + + Q++++
Sbjct: 261 CRRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQ 315
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 120/288 (41%), Gaps = 47/288 (16%)
Query: 346 LGKGSYGTAYKA-----VLEESTTXXXXXXXXXXXXXRD---FEQQMEIVGRVGQHPNVV 397
LG+GS+G Y+ + E+ T R+ F + ++ H +VV
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HVV 83
Query: 398 PLRAYYYSKDEKLLVYDYFASGSLSTLLHGNR-----GAGRTPLDWETRVKILLGTARGV 452
L L+V + A G L + L R GR P + +++ A G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 453 AHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG--------Y 504
A++++ KF H N+ A N ++ D I DFG+T ++ T G +
Sbjct: 144 AYLNA---KKFVHRNLAARNCMVAHDFTVKIGDFGMT--RDIYETDYYRKGGKGLLPVRW 198
Query: 505 RAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTA 563
APE ++ + SD++SFGV+L E+ + + P Q + + ++
Sbjct: 199 MAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF-------------- 244
Query: 564 EVFD-VELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEE 610
V D L + N E + ++++ C P+MRP E+V ++++
Sbjct: 245 -VMDGGYLDQPDNCPERVTDLMRM---CWQFNPNMRPTFLEIVNLLKD 288
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 55/114 (48%), Gaps = 12/114 (10%)
Query: 436 LDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGL-----TP 490
LD E +L G+ H+HS G H ++K SN+++ D I DFGL T
Sbjct: 117 LDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 173
Query: 491 LMNVPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRD 544
M P +R YRAPEVI + D++S G ++ EM+ K + P RD
Sbjct: 174 FMMTPYVVTRY--YRAPEVILGMGYKENVDLWSVGCIMGEMVCHK--ILFPGRD 223
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 95/216 (43%), Gaps = 25/216 (11%)
Query: 344 EVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFE------QQMEIVGRVGQHPNVV 397
E LG G++G ++ V E +T D E Q M ++ +HP +V
Sbjct: 163 EELGTGAFGVVHR-VTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVL----RHPTLV 217
Query: 398 PLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHS 457
L + +E +++Y++ + G L + + + V+ + +G+ H+H
Sbjct: 218 NLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNK----MSEDEAVEYMRQVCKGLCHMHE 273
Query: 458 MGGPKFTHGNIKASNVLINQDLDGCIS--DFGLT----PLMNVPATPSRSAGYRAPEVIE 511
+ H ++K N++ + DFGLT P +V T + +A + APEV E
Sbjct: 274 NN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVT-TGTAEFAAPEVAE 329
Query: 512 TRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMV 547
+ + +D++S GVL +L+G +P D+ +
Sbjct: 330 GKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETL 365
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 55/114 (48%), Gaps = 12/114 (10%)
Query: 436 LDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGL-----TP 490
LD E +L G+ H+HS G H ++K SN+++ D I DFGL T
Sbjct: 128 LDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 184
Query: 491 LMNVPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRD 544
M P +R YRAPEVI + D++S G ++ EM+ K + P RD
Sbjct: 185 FMMTPYVVTRY--YRAPEVILGMGYKENVDLWSVGCIMGEMVCHK--ILFPGRD 234
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 78/176 (44%), Gaps = 29/176 (16%)
Query: 380 FEQQMEIVGRVGQHPNVVPLRAYYYSKDEK--LLVYDYFASGSLSTLLHGNRGAGRTPLD 437
++Q+++I+ R H +++ + + EK LV +Y GSL L R +
Sbjct: 63 WKQEIDIL-RTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL------PRHSIG 115
Query: 438 WETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPAT 497
+ G+A++H+ + H N+ A NVL++ D I DFGL A
Sbjct: 116 LAQLLLFAQQICEGMAYLHAQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAK-----AV 167
Query: 498 PSRSAGYR------------APEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSP 541
P YR APE ++ K + SDV+SFGV L E+LT QSP
Sbjct: 168 PEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSP 223
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 120/288 (41%), Gaps = 47/288 (16%)
Query: 346 LGKGSYGTAYKA-----VLEESTTXXXXXXXXXXXXXRD---FEQQMEIVGRVGQHPNVV 397
LG+GS+G Y+ + E+ T R+ F + ++ H +VV
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HVV 83
Query: 398 PLRAYYYSKDEKLLVYDYFASGSLSTLLHGNR-----GAGRTPLDWETRVKILLGTARGV 452
L L+V + A G L + L R GR P + +++ A G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 453 AHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG--------Y 504
A++++ KF H ++ A N ++ D I DFG+T ++ T G +
Sbjct: 144 AYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMT--RDIXETDXXRKGGKGLLPVRW 198
Query: 505 RAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTA 563
APE ++ + SD++SFGV+L E+ + + P Q + + ++
Sbjct: 199 MAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF-------------- 244
Query: 564 EVFD-VELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEE 610
V D L + N E + ++++ C P+MRP E+V ++++
Sbjct: 245 -VMDGGYLDQPDNCPERVTDLMRM---CWQFNPNMRPTFLEIVNLLKD 288
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 54/115 (46%), Gaps = 10/115 (8%)
Query: 436 LDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGL-----TP 490
LD E +L G+ H+HS G H ++K SN+++ D I DFGL T
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTACTN 179
Query: 491 LMNVPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDD 545
M P +R YRAPEVI ++ D++S G ++ E++ G Q D
Sbjct: 180 FMMTPYVVTRY--YRAPEVILGMGYAANVDIWSVGCIMGELVKGCVIFQGTDHID 232
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 96/212 (45%), Gaps = 29/212 (13%)
Query: 346 LGKGSYGTAYKAVLEESTTXXXXXX---------XXXXXXXRDFEQQMEIVGRVGQHPNV 396
+GKG +G +K L + + ++F++++ I+ + HPN+
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNL-NHPNI 85
Query: 397 VPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIH 456
V L Y + +V ++ G L L P+ W +++++L A G+ ++
Sbjct: 86 VKL--YGLMHNPPRMVMEFVPCGDLYHRLLDKA----HPIKWSVKLRLMLDIALGIEYMQ 139
Query: 457 SMGGPKFTHGNIKASNVLINQDLD------GCISDFGLTPLMNVPATPSRSAGYR--APE 508
+ P H ++++ N+ + Q LD ++DF L+ +V + ++ APE
Sbjct: 140 NQN-PPIVHRDLRSPNIFL-QSLDENAPVCAKVADFSLSQ-QSVHSVSGLLGNFQWMAPE 196
Query: 509 VI--ETRKHSHKSDVYSFGVLLLEMLTGKAPL 538
I E ++ K+D YSF ++L +LTG+ P
Sbjct: 197 TIGAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 95/216 (43%), Gaps = 25/216 (11%)
Query: 344 EVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFE------QQMEIVGRVGQHPNVV 397
E LG G++G ++ V E +T D E Q M ++ +HP +V
Sbjct: 57 EELGTGAFGVVHR-VTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVL----RHPTLV 111
Query: 398 PLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHS 457
L + +E +++Y++ + G L + + + V+ + +G+ H+H
Sbjct: 112 NLHDAFEDDNEMVMIYEFMSGGELFEKV----ADEHNKMSEDEAVEYMRQVCKGLCHMHE 167
Query: 458 MGGPKFTHGNIKASNVLINQDLDGCIS--DFGLT----PLMNVPATPSRSAGYRAPEVIE 511
+ H ++K N++ + DFGLT P +V T + +A + APEV E
Sbjct: 168 NN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVT-TGTAEFAAPEVAE 223
Query: 512 TRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMV 547
+ + +D++S GVL +L+G +P D+ +
Sbjct: 224 GKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETL 259
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 89/207 (42%), Gaps = 25/207 (12%)
Query: 343 AEVLGKGSYGTAYKA--------VLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHP 394
E +G+G+YG YKA V + R+ E+ HP
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-----NHP 61
Query: 395 NVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAH 454
N+V L +++++ LV+++ L T + + G PL L +G+A
Sbjct: 62 NIVKLLDVIHTENKLYLVFEH-VHQDLKTFMDASALTG-IPLPLIK--SYLFQLLQGLAF 117
Query: 455 IHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR----SAGYRAPEV- 509
HS + H ++K N+LIN + ++DFGL VP + YRAPE+
Sbjct: 118 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEIL 174
Query: 510 IETRKHSHKSDVYSFGVLLLEMLTGKA 536
+ + +S D++S G + EM+T +A
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRRA 201
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 92/232 (39%), Gaps = 40/232 (17%)
Query: 337 DLLRASAEVLGKGSYGTAYKA---------------VLEESTTXXXXXXXXXXXXXRDFE 381
+LLR VLGKG YG ++ VL+++ R+
Sbjct: 20 ELLR----VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNIL 75
Query: 382 QQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWE-T 440
+++ +HP +V L + + + L+ +Y + G L L R + E T
Sbjct: 76 EEV-------KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLE------REGIFMEDT 122
Query: 441 RVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR 500
L + + H+H G + ++K N+++N ++DFGL T +
Sbjct: 123 ACFYLAEISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTH 179
Query: 501 ----SAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVD 548
+ Y APE++ H+ D +S G L+ +MLTG P R +D
Sbjct: 180 XFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTID 231
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 88/207 (42%), Gaps = 25/207 (12%)
Query: 343 AEVLGKGSYGTAYKA--------VLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHP 394
E +G+G+YG YKA V + R+ E+ HP
Sbjct: 15 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-----NHP 69
Query: 395 NVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAH 454
N+V L +++++ LV++ F L + + G PL L +G+A
Sbjct: 70 NIVKLLDVIHTENKLYLVFE-FLHQDLKKFMDASALTG-IPLPLIK--SYLFQLLQGLAF 125
Query: 455 IHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR----SAGYRAPEVI 510
HS + H ++K N+LIN + ++DFGL VP + YRAPE++
Sbjct: 126 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEIL 182
Query: 511 ETRK-HSHKSDVYSFGVLLLEMLTGKA 536
K +S D++S G + EM+T +A
Sbjct: 183 LGXKYYSTAVDIWSLGCIFAEMVTRRA 209
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 88/207 (42%), Gaps = 25/207 (12%)
Query: 343 AEVLGKGSYGTAYKA--------VLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHP 394
E +G+G+YG YKA V + R+ E+ HP
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-----NHP 62
Query: 395 NVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAH 454
N+V L +++++ LV++ F L + + G PL L +G+A
Sbjct: 63 NIVKLLDVIHTENKLYLVFE-FLHQDLKKFMDASALTG-IPLPLIK--SYLFQLLQGLAF 118
Query: 455 IHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR----SAGYRAPEVI 510
HS + H ++K N+LIN + ++DFGL VP + YRAPE++
Sbjct: 119 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEIL 175
Query: 511 ETRK-HSHKSDVYSFGVLLLEMLTGKA 536
K +S D++S G + EM+T +A
Sbjct: 176 LGXKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 95/215 (44%), Gaps = 19/215 (8%)
Query: 336 EDLLRASAEVLGKGSYGTAYKAV--LEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQH 393
++LL A E LG G++G+ + V + + D E+ M + Q
Sbjct: 9 DNLLIADIE-LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQL 67
Query: 394 PNVVPLRAYYYSKDEKL-LVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGV 452
N +R + E L LV + G L L G R P+ ++L + G+
Sbjct: 68 DNPYIVRLIGVCQAEALMLVMEMAGGGPLHKFLVGKRE--EIPVS--NVAELLHQVSMGM 123
Query: 453 AHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPAT--PSRSAG-----YR 505
++ F H ++ A NVL+ ISDFGL+ + + +RSAG +
Sbjct: 124 KYLEE---KNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWY 180
Query: 506 APEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQ 539
APE I RK S +SDV+S+GV + E L+ G+ P +
Sbjct: 181 APECINFRKFSSRSDVWSYGVTMWEALSYGQKPYK 215
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 78/171 (45%), Gaps = 14/171 (8%)
Query: 383 QMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRV 442
Q + R HP++V L +++ ++ + G L + L + + LD + +
Sbjct: 60 QEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKFS----LDLASLI 114
Query: 443 KILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSA 502
+ +A++ S +F H +I A NVL++ + + DFGL+ M S
Sbjct: 115 LYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASK 171
Query: 503 G-----YRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMV 547
G + APE I R+ + SDV+ FGV + E+L G P Q +D++
Sbjct: 172 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 222
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 93/216 (43%), Gaps = 27/216 (12%)
Query: 334 DLEDLLRASAEVLGKGSYGTAYKA--------VLEESTTXXXXXXXXXXXXXRDFEQQME 385
D+E+ + E +G+G+YG YKA V + R+ E
Sbjct: 5 DMENFQKV--EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 62
Query: 386 IVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKIL 445
+ HPN+V L +++++ LV++ F L + + G PL L
Sbjct: 63 L-----NHPNIVKLLDVIHTENKLYLVFE-FLHQDLKKFMDASALTG-IPLPLIK--SYL 113
Query: 446 LGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR----S 501
+G+A HS + H ++K N+LIN + ++DFGL VP +
Sbjct: 114 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVT 170
Query: 502 AGYRAPEV-IETRKHSHKSDVYSFGVLLLEMLTGKA 536
YRAPE+ + + +S D++S G + EM+T +A
Sbjct: 171 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 206
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 88/207 (42%), Gaps = 25/207 (12%)
Query: 343 AEVLGKGSYGTAYKA--------VLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHP 394
E +G+G+YG YKA V + R+ E+ HP
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-----NHP 65
Query: 395 NVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAH 454
N+V L +++++ LV++ F L + + G PL L +G+A
Sbjct: 66 NIVKLLDVIHTENKLYLVFE-FLHQDLKKFMDASALTG-IPLPLIK--SYLFQLLQGLAF 121
Query: 455 IHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR----SAGYRAPEV- 509
HS + H ++K N+LIN + ++DFGL VP + YRAPE+
Sbjct: 122 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 178
Query: 510 IETRKHSHKSDVYSFGVLLLEMLTGKA 536
+ + +S D++S G + EM+T +A
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRRA 205
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 88/207 (42%), Gaps = 25/207 (12%)
Query: 343 AEVLGKGSYGTAYKA--------VLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHP 394
E +G+G+YG YKA V + R+ E+ HP
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-----NHP 64
Query: 395 NVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAH 454
N+V L +++++ LV++ F L + + G PL L +G+A
Sbjct: 65 NIVKLLDVIHTENKLYLVFE-FLHQDLKKFMDASALTG-IPLPLIK--SYLFQLLQGLAF 120
Query: 455 IHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR----SAGYRAPEV- 509
HS + H ++K N+LIN + ++DFGL VP + YRAPE+
Sbjct: 121 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 177
Query: 510 IETRKHSHKSDVYSFGVLLLEMLTGKA 536
+ + +S D++S G + EM+T +A
Sbjct: 178 LGCKYYSTAVDIWSLGCIFAEMVTRRA 204
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 90/217 (41%), Gaps = 23/217 (10%)
Query: 336 EDLLRASAEVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVG---- 391
E ++ S V+GKG +G Y + + QQ+E R G
Sbjct: 19 ERVVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEM-QQVEAFLREGLLMR 77
Query: 392 --QHPNVVPLRAYYYSKDE-KLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGT 448
HPNV+ L + ++ Y G L + R R P + + L
Sbjct: 78 GLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFI---RSPQRNP-TVKDLISFGLQV 133
Query: 449 ARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM----NVPATPSRSA-- 502
ARG+ + + KF H ++ A N ++++ ++DFGL + R A
Sbjct: 134 ARGMEY---LAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARL 190
Query: 503 --GYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAP 537
+ A E ++T + + KSDV+SFGVLL E+LT AP
Sbjct: 191 PVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAP 227
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 74/156 (47%), Gaps = 12/156 (7%)
Query: 387 VGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILL 446
+ ++ HPN+V L ++ L+ +Y + G + L + GR + E R K
Sbjct: 67 IMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAH---GRMK-EKEARSK-FR 121
Query: 447 GTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG--- 503
V + H + H ++KA N+L++ D++ I+DFG + V G
Sbjct: 122 QIVSAVQYCHQ---KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPP 178
Query: 504 YRAPEVIETRKHSH-KSDVYSFGVLLLEMLTGKAPL 538
Y APE+ + +K+ + DV+S GV+L +++G P
Sbjct: 179 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 214
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 142/334 (42%), Gaps = 65/334 (19%)
Query: 305 EKPKEEFGSGVQEPEKNKLVFFEGCSYNFDLEDLLRASA-EVLGKGSYGTAYKAVLEEST 363
E PK EF P KN LV + + +++A+A + G+ Y T +L+E+
Sbjct: 14 EDPKWEF------PRKN-LVLGKTLGEG-EFGKVVKATAFHLKGRAGYTTVAVKMLKENA 65
Query: 364 TXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLST 423
+ RD + ++ +V HP+V+ L LL+ +Y GSL
Sbjct: 66 SPSEL---------RDLLSEFNVLKQV-NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRG 115
Query: 424 LLHGNRGAG-----------RTPLDWETRVKILLG--------TARGVAHIHSMGGPKFT 464
L +R G + LD + +G ++G+ ++ M
Sbjct: 116 FLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMS---LV 172
Query: 465 HGNIKASNVLINQDLDGCISDFGLT-PLMNVPATPSRSAG-----YRAPEVIETRKHSHK 518
H ++ A N+L+ + ISDFGL+ + + RS G + A E + ++ +
Sbjct: 173 HRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQ 232
Query: 519 SDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNIE 577
SDV+SFGVLL E++T G P + + +L +++ R E R N
Sbjct: 233 SDVWSFGVLLWEIVTLGGNPYPGIPPERLFNL---LKTGHRME-----------RPDNCS 278
Query: 578 EEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEV 611
EEM +++ + C + PD RP ++ + +E++
Sbjct: 279 EEMYRLM---LQCWKQEPDKRPVFADISKDLEKM 309
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 55/114 (48%), Gaps = 12/114 (10%)
Query: 436 LDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGL-----TP 490
LD E +L G+ H+HS G H ++K SN+++ D I DFGL T
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 179
Query: 491 LMNVPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRD 544
M P +R YRAPEVI + D++S G ++ EM+ K + P RD
Sbjct: 180 FMMEPEVVTRY--YRAPEVILGMGYKENVDLWSVGCIMGEMVCHK--ILFPGRD 229
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 88/207 (42%), Gaps = 25/207 (12%)
Query: 343 AEVLGKGSYGTAYKA--------VLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHP 394
E +G+G+YG YKA V + R+ E+ HP
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-----NHP 62
Query: 395 NVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAH 454
N+V L +++++ LV++ F L + + G PL L +G+A
Sbjct: 63 NIVKLLDVIHTENKLYLVFE-FLHQDLKKFMDASALTG-IPLPLIK--SYLFQLLQGLAF 118
Query: 455 IHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR----SAGYRAPEV- 509
HS + H ++K N+LIN + ++DFGL VP + YRAPE+
Sbjct: 119 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 175
Query: 510 IETRKHSHKSDVYSFGVLLLEMLTGKA 536
+ + +S D++S G + EM+T +A
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 88/207 (42%), Gaps = 25/207 (12%)
Query: 343 AEVLGKGSYGTAYKA--------VLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHP 394
E +G+G+YG YKA V + R+ E+ HP
Sbjct: 12 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-----NHP 66
Query: 395 NVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAH 454
N+V L +++++ LV++ F L + + G PL L +G+A
Sbjct: 67 NIVKLLDVIHTENKLYLVFE-FLHQDLKKFMDASALTG-IPLPLIK--SYLFQLLQGLAF 122
Query: 455 IHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR----SAGYRAPEV- 509
HS + H ++K N+LIN + ++DFGL VP + YRAPE+
Sbjct: 123 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 179
Query: 510 IETRKHSHKSDVYSFGVLLLEMLTGKA 536
+ + +S D++S G + EM+T +A
Sbjct: 180 LGCKYYSTAVDIWSLGCIFAEMVTRRA 206
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 88/207 (42%), Gaps = 25/207 (12%)
Query: 343 AEVLGKGSYGTAYKA--------VLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHP 394
E +G+G+YG YKA V + R+ E+ HP
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-----NHP 61
Query: 395 NVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAH 454
N+V L +++++ LV++ F L + + G PL L +G+A
Sbjct: 62 NIVKLLDVIHTENKLYLVFE-FLHQDLKKFMDASALTG-IPLPLIK--SYLFQLLQGLAF 117
Query: 455 IHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR----SAGYRAPEV- 509
HS + H ++K N+LIN + ++DFGL VP + YRAPE+
Sbjct: 118 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 174
Query: 510 IETRKHSHKSDVYSFGVLLLEMLTGKA 536
+ + +S D++S G + EM+T +A
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRRA 201
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 88/207 (42%), Gaps = 25/207 (12%)
Query: 343 AEVLGKGSYGTAYKA--------VLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHP 394
E +G+G+YG YKA V + R+ E+ HP
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-----NHP 62
Query: 395 NVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAH 454
N+V L +++++ LV++ F L + + G PL L +G+A
Sbjct: 63 NIVKLLDVIHTENKLYLVFE-FLHQDLKKFMDASALTG-IPLPLIK--SYLFQLLQGLAF 118
Query: 455 IHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR----SAGYRAPEV- 509
HS + H ++K N+LIN + ++DFGL VP + YRAPE+
Sbjct: 119 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 175
Query: 510 IETRKHSHKSDVYSFGVLLLEMLTGKA 536
+ + +S D++S G + EM+T +A
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 88/207 (42%), Gaps = 25/207 (12%)
Query: 343 AEVLGKGSYGTAYKA--------VLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHP 394
E +G+G+YG YKA V + R+ E+ HP
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-----NHP 61
Query: 395 NVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAH 454
N+V L +++++ LV++ F L + + G PL L +G+A
Sbjct: 62 NIVKLLDVIHTENKLYLVFE-FLHQDLKKFMDASALTG-IPLPLIK--SYLFQLLQGLAF 117
Query: 455 IHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR----SAGYRAPEV- 509
HS + H ++K N+LIN + ++DFGL VP + YRAPE+
Sbjct: 118 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 174
Query: 510 IETRKHSHKSDVYSFGVLLLEMLTGKA 536
+ + +S D++S G + EM+T +A
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRRA 201
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 88/207 (42%), Gaps = 25/207 (12%)
Query: 343 AEVLGKGSYGTAYKA--------VLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHP 394
E +G+G+YG YKA V + R+ E+ HP
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-----NHP 63
Query: 395 NVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAH 454
N+V L +++++ LV++ F L + + G PL L +G+A
Sbjct: 64 NIVKLLDVIHTENKLYLVFE-FLHQDLKKFMDASALTG-IPLPLIK--SYLFQLLQGLAF 119
Query: 455 IHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR----SAGYRAPEV- 509
HS + H ++K N+LIN + ++DFGL VP + YRAPE+
Sbjct: 120 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 176
Query: 510 IETRKHSHKSDVYSFGVLLLEMLTGKA 536
+ + +S D++S G + EM+T +A
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRRA 203
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 74/156 (47%), Gaps = 12/156 (7%)
Query: 387 VGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILL 446
+ ++ HPN+V L ++ L+ +Y + G + L + GR + E R K
Sbjct: 64 IMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAH---GRMK-EKEARSK-FR 118
Query: 447 GTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG--- 503
V + H + H ++KA N+L++ D++ I+DFG + V G
Sbjct: 119 QIVSAVQYCHQ---KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFCGSPP 175
Query: 504 YRAPEVIETRKHSH-KSDVYSFGVLLLEMLTGKAPL 538
Y APE+ + +K+ + DV+S GV+L +++G P
Sbjct: 176 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 211
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 88/207 (42%), Gaps = 25/207 (12%)
Query: 343 AEVLGKGSYGTAYKA--------VLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHP 394
E +G+G+YG YKA V + R+ E+ HP
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-----NHP 64
Query: 395 NVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAH 454
N+V L +++++ LV++ F L + + G PL L +G+A
Sbjct: 65 NIVKLLDVIHTENKLYLVFE-FLHQDLKKFMDASALTG-IPLPLIK--SYLFQLLQGLAF 120
Query: 455 IHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR----SAGYRAPEV- 509
HS + H ++K N+LIN + ++DFGL VP + YRAPE+
Sbjct: 121 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 177
Query: 510 IETRKHSHKSDVYSFGVLLLEMLTGKA 536
+ + +S D++S G + EM+T +A
Sbjct: 178 LGCKYYSTAVDIWSLGCIFAEMVTRRA 204
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 88/207 (42%), Gaps = 25/207 (12%)
Query: 343 AEVLGKGSYGTAYKA--------VLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHP 394
E +G+G+YG YKA V + R+ E+ HP
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-----NHP 65
Query: 395 NVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAH 454
N+V L +++++ LV++ F L + + G PL L +G+A
Sbjct: 66 NIVKLLDVIHTENKLYLVFE-FLHQDLKKFMDASALTG-IPLPLIK--SYLFQLLQGLAF 121
Query: 455 IHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR----SAGYRAPEV- 509
HS + H ++K N+LIN + ++DFGL VP + YRAPE+
Sbjct: 122 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 178
Query: 510 IETRKHSHKSDVYSFGVLLLEMLTGKA 536
+ + +S D++S G + EM+T +A
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRRA 205
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 88/207 (42%), Gaps = 25/207 (12%)
Query: 343 AEVLGKGSYGTAYKA--------VLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHP 394
E +G+G+YG YKA V + R+ E+ HP
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-----NHP 62
Query: 395 NVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAH 454
N+V L +++++ LV++ F L + + G PL L +G+A
Sbjct: 63 NIVKLLDVIHTENKLYLVFE-FLHQDLKKFMDASALTG-IPLPLIK--SYLFQLLQGLAF 118
Query: 455 IHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR----SAGYRAPEV- 509
HS + H ++K N+LIN + ++DFGL VP + YRAPE+
Sbjct: 119 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 175
Query: 510 IETRKHSHKSDVYSFGVLLLEMLTGKA 536
+ + +S D++S G + EM+T +A
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 88/207 (42%), Gaps = 25/207 (12%)
Query: 343 AEVLGKGSYGTAYKA--------VLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHP 394
E +G+G+YG YKA V + R+ E+ HP
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-----NHP 62
Query: 395 NVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAH 454
N+V L +++++ LV++ F L + + G PL L +G+A
Sbjct: 63 NIVKLLDVIHTENKLYLVFE-FLHQDLKKFMDASALTG-IPLPLIK--SYLFQLLQGLAF 118
Query: 455 IHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR----SAGYRAPEV- 509
HS + H ++K N+LIN + ++DFGL VP + YRAPE+
Sbjct: 119 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 175
Query: 510 IETRKHSHKSDVYSFGVLLLEMLTGKA 536
+ + +S D++S G + EM+T +A
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 98/228 (42%), Gaps = 28/228 (12%)
Query: 343 AEVLGKGSYGTAYKAVLEE----STTXXXXXXXXXXXXXRDFEQQMEIVGRVGQ--HPNV 396
++LG+G +G+ + L++ S R+ E+ + + HPNV
Sbjct: 39 GKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNV 98
Query: 397 VPLRAYYYSKDEK-----LLVYDYFASGSLST-LLHGNRGAGRTPLDWETRVKILLGTAR 450
+ L + +++ + G L T LL+ G + +T +K ++ A
Sbjct: 99 IRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIAL 158
Query: 451 GVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM---------NVPATPSRS 501
G+ ++ + F H ++ A N ++ D+ C++DFGL+ + + P +
Sbjct: 159 GMEYLSNRN---FLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVK- 214
Query: 502 AGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVD 548
+ A E + R ++ KSDV++FGV + E+ T G P +M D
Sbjct: 215 --WIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYD 260
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 88/207 (42%), Gaps = 25/207 (12%)
Query: 343 AEVLGKGSYGTAYKA--------VLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHP 394
E +G+G+YG YKA V + R+ E+ HP
Sbjct: 15 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-----NHP 69
Query: 395 NVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAH 454
N+V L +++++ LV++ F L + + G PL L +G+A
Sbjct: 70 NIVKLLDVIHTENKLYLVFE-FLHQDLKKFMDASALTG-IPLPLIK--SYLFQLLQGLAF 125
Query: 455 IHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR----SAGYRAPEV- 509
HS + H ++K N+LIN + ++DFGL VP + YRAPE+
Sbjct: 126 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEIL 182
Query: 510 IETRKHSHKSDVYSFGVLLLEMLTGKA 536
+ + +S D++S G + EM+T +A
Sbjct: 183 LGCKYYSTAVDIWSLGCIFAEMVTRRA 209
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 88/207 (42%), Gaps = 25/207 (12%)
Query: 343 AEVLGKGSYGTAYKA--------VLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHP 394
E +G+G+YG YKA V + R+ E+ HP
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-----NHP 64
Query: 395 NVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAH 454
N+V L +++++ LV++ F L + + G PL L +G+A
Sbjct: 65 NIVKLLDVIHTENKLYLVFE-FLHQDLKKFMDASALTG-IPLPLIK--SYLFQLLQGLAF 120
Query: 455 IHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR----SAGYRAPEV- 509
HS + H ++K N+LIN + ++DFGL VP + YRAPE+
Sbjct: 121 CHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 177
Query: 510 IETRKHSHKSDVYSFGVLLLEMLTGKA 536
+ + +S D++S G + EM+T +A
Sbjct: 178 LGCKYYSTAVDIWSLGCIFAEMVTRRA 204
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 88/207 (42%), Gaps = 25/207 (12%)
Query: 343 AEVLGKGSYGTAYKA--------VLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHP 394
E +G+G+YG YKA V + R+ E+ HP
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-----NHP 61
Query: 395 NVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAH 454
N+V L +++++ LV++ F L + + G PL L +G+A
Sbjct: 62 NIVKLLDVIHTENKLYLVFE-FLHQDLKKFMDASALTG-IPLPLIK--SYLFQLLQGLAF 117
Query: 455 IHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR----SAGYRAPEV- 509
HS + H ++K N+LIN + ++DFGL VP + YRAPE+
Sbjct: 118 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEIL 174
Query: 510 IETRKHSHKSDVYSFGVLLLEMLTGKA 536
+ + +S D++S G + EM+T +A
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRRA 201
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 88/207 (42%), Gaps = 25/207 (12%)
Query: 343 AEVLGKGSYGTAYKA--------VLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHP 394
E +G+G+YG YKA V + R+ E+ HP
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-----NHP 62
Query: 395 NVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAH 454
N+V L +++++ LV++ F L + + G PL L +G+A
Sbjct: 63 NIVKLLDVIHTENKLYLVFE-FLHQDLKKFMDASALTG-IPLPLIK--SYLFQLLQGLAF 118
Query: 455 IHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR----SAGYRAPEV- 509
HS + H ++K N+LIN + ++DFGL VP + YRAPE+
Sbjct: 119 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEIL 175
Query: 510 IETRKHSHKSDVYSFGVLLLEMLTGKA 536
+ + +S D++S G + EM+T +A
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 88/207 (42%), Gaps = 25/207 (12%)
Query: 343 AEVLGKGSYGTAYKA--------VLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHP 394
E +G+G+YG YKA V + R+ E+ HP
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-----NHP 61
Query: 395 NVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAH 454
N+V L +++++ LV++ F L + + G PL L +G+A
Sbjct: 62 NIVKLLDVIHTENKLYLVFE-FLHQDLKKFMDASALTG-IPLPLIK--SYLFQLLQGLAF 117
Query: 455 IHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR----SAGYRAPEV- 509
HS + H ++K N+LIN + ++DFGL VP + YRAPE+
Sbjct: 118 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEIL 174
Query: 510 IETRKHSHKSDVYSFGVLLLEMLTGKA 536
+ + +S D++S G + EM+T +A
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRRA 201
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 88/207 (42%), Gaps = 25/207 (12%)
Query: 343 AEVLGKGSYGTAYKA--------VLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHP 394
E +G+G+YG YKA V + R+ E+ HP
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-----NHP 62
Query: 395 NVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAH 454
N+V L +++++ LV++ F L + + G PL L +G+A
Sbjct: 63 NIVKLLDVIHTENKLYLVFE-FLHQDLKKFMDASALTG-IPLPLIK--SYLFQLLQGLAF 118
Query: 455 IHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR----SAGYRAPEV- 509
HS + H ++K N+LIN + ++DFGL VP + YRAPE+
Sbjct: 119 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEIL 175
Query: 510 IETRKHSHKSDVYSFGVLLLEMLTGKA 536
+ + +S D++S G + EM+T +A
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 88/207 (42%), Gaps = 25/207 (12%)
Query: 343 AEVLGKGSYGTAYKA--------VLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHP 394
E +G+G+YG YKA V + R+ E+ HP
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-----NHP 63
Query: 395 NVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAH 454
N+V L +++++ LV++ F L + + G PL L +G+A
Sbjct: 64 NIVKLLDVIHTENKLYLVFE-FLHQDLKKFMDASALTG-IPLPLIK--SYLFQLLQGLAF 119
Query: 455 IHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR----SAGYRAPEV- 509
HS + H ++K N+LIN + ++DFGL VP + YRAPE+
Sbjct: 120 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEIL 176
Query: 510 IETRKHSHKSDVYSFGVLLLEMLTGKA 536
+ + +S D++S G + EM+T +A
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRRA 203
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 119/288 (41%), Gaps = 47/288 (16%)
Query: 346 LGKGSYGTAYKA-----VLEESTTXXXXXXXXXXXXXRD---FEQQMEIVGRVGQHPNVV 397
LG+GS+G Y+ + E+ T R+ F + ++ H +VV
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HVV 83
Query: 398 PLRAYYYSKDEKLLVYDYFASGSLSTLLHGNR-----GAGRTPLDWETRVKILLGTARGV 452
L L+V + A G L + L R GR P + +++ A G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 453 AHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG--------Y 504
A++++ KF H ++ A N ++ D I DFG+T ++ T G +
Sbjct: 144 AYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMT--RDIXETDXXRKGGKGLLPVRW 198
Query: 505 RAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTA 563
APE ++ + SD++SFGV+L E+ + + P Q + + ++
Sbjct: 199 MAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF-------------- 244
Query: 564 EVFD-VELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEE 610
V D L + N E + ++++ C P MRP E+V ++++
Sbjct: 245 -VMDGGYLDQPDNCPERVTDLMRM---CWQFNPKMRPTFLEIVNLLKD 288
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 88/207 (42%), Gaps = 25/207 (12%)
Query: 343 AEVLGKGSYGTAYKA--------VLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHP 394
E +G+G+YG YKA V + R+ E+ HP
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-----NHP 63
Query: 395 NVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAH 454
N+V L +++++ LV++ F L + + G PL L +G+A
Sbjct: 64 NIVKLLDVIHTENKLYLVFE-FLHQDLKKFMDASALTG-IPLPLIK--SYLFQLLQGLAF 119
Query: 455 IHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR----SAGYRAPEV- 509
HS + H ++K N+LIN + ++DFGL VP + YRAPE+
Sbjct: 120 CHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 176
Query: 510 IETRKHSHKSDVYSFGVLLLEMLTGKA 536
+ + +S D++S G + EM+T +A
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRRA 203
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 97/217 (44%), Gaps = 20/217 (9%)
Query: 345 VLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEI----VGRVGQHPNVVPLR 400
+G GSYG K + +S + E+QM + + R +HPN+V R
Sbjct: 13 TIGTGSYGRCQK-IRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIV--R 69
Query: 401 AYYYSKDEK----LLVYDYFASGSLSTLLHGNRGAG-RTPLDWE--TRVKILLGTARGVA 453
Y D +V +Y G L++++ +G R LD E RV L A
Sbjct: 70 YYDRIIDRTNTTLYIVMEYCEGGDLASVI--TKGTKERQYLDEEFVLRVMTQLTLALKEC 127
Query: 454 HIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR----SAGYRAPEV 509
H S GG H ++K +NV ++ + + DFGL ++N + ++ + Y +PE
Sbjct: 128 HRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQ 187
Query: 510 IETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDM 546
+ ++ KSD++S G LL E+ P + ++ ++
Sbjct: 188 MNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKEL 224
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 95/208 (45%), Gaps = 31/208 (14%)
Query: 414 DYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNV 473
++ G+L + RG LD +++ +GV +IHS K + ++K SN+
Sbjct: 100 EFCDKGTLEQWIEKRRGE---KLDKVLALELFEQITKGVDYIHS---KKLINRDLKPSNI 153
Query: 474 LINQDLDGCISDFGLTPLMNVPATPSRSAG---YRAPEVIETRKHSHKSDVYSFGVLLLE 530
+ I DFGL + RS G Y +PE I ++ + + D+Y+ G++L E
Sbjct: 154 FLVDTKQVKIGDFGLVTSLKNDGKRXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAE 213
Query: 531 MLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMAC 590
+L D + ++ +R+ +++FD + E+ ++Q L
Sbjct: 214 LL--------HVCDTAFETSKFFTD-LRDGIISDIFDKK-------EKTLLQKL------ 251
Query: 591 VAKVPDMRPNMDEVVRMIEEVRQSDSEN 618
++K P+ RPN E++R + ++S +N
Sbjct: 252 LSKKPEDRPNTSEILRTLTVWKKSPEKN 279
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 97/217 (44%), Gaps = 20/217 (9%)
Query: 345 VLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEI----VGRVGQHPNVVPLR 400
+G GSYG K + +S + E+QM + + R +HPN+V R
Sbjct: 13 TIGTGSYGRCQK-IRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIV--R 69
Query: 401 AYYYSKDEK----LLVYDYFASGSLSTLLHGNRGAG-RTPLDWE--TRVKILLGTARGVA 453
Y D +V +Y G L++++ +G R LD E RV L A
Sbjct: 70 YYDRIIDRTNTTLYIVMEYCEGGDLASVI--TKGTKERQYLDEEFVLRVMTQLTLALKEC 127
Query: 454 HIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR----SAGYRAPEV 509
H S GG H ++K +NV ++ + + DFGL ++N + ++ + Y +PE
Sbjct: 128 HRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQ 187
Query: 510 IETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDM 546
+ ++ KSD++S G LL E+ P + ++ ++
Sbjct: 188 MNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKEL 224
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 88/207 (42%), Gaps = 25/207 (12%)
Query: 343 AEVLGKGSYGTAYKA--------VLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHP 394
E +G+G+YG YKA V + R+ E+ HP
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-----NHP 62
Query: 395 NVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAH 454
N+V L +++++ LV++ F L + + G PL L +G+A
Sbjct: 63 NIVKLLDVIHTENKLYLVFE-FLHQDLKDFMDASALTG-IPLPLIK--SYLFQLLQGLAF 118
Query: 455 IHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR----SAGYRAPEV- 509
HS + H ++K N+LIN + ++DFGL VP + YRAPE+
Sbjct: 119 CHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 175
Query: 510 IETRKHSHKSDVYSFGVLLLEMLTGKA 536
+ + +S D++S G + EM+T +A
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 105/259 (40%), Gaps = 36/259 (13%)
Query: 378 RDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS-GSLSTLLHGNRGA----- 431
R +++I+ +G H NVV L L+V F G+LST L R
Sbjct: 66 RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYK 125
Query: 432 ------GRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISD 485
+ L E + A+G+ + S K H ++ A N+L+++ I D
Sbjct: 126 VAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICD 182
Query: 486 FGLTPLMNVPATPSRSAGYR------APEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQ 539
FGL + R R APE I R ++ +SDV+SFGVLL E+ + A
Sbjct: 183 FGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGA--- 239
Query: 540 SPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRP 599
SP +D EE+ + + MR + +M Q + C P RP
Sbjct: 240 SPYPGVKID----------EEFCRRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRP 287
Query: 600 NMDEVVRMIEEVRQSDSEN 618
E+V + + Q++++
Sbjct: 288 TFSELVEHLGNLLQANAQQ 306
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 88/207 (42%), Gaps = 25/207 (12%)
Query: 343 AEVLGKGSYGTAYKA--------VLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHP 394
E +G+G+YG YKA V + R+ E+ HP
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-----NHP 63
Query: 395 NVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAH 454
N+V L +++++ LV++ F L + + G PL L +G+A
Sbjct: 64 NIVKLLDVIHTENKLYLVFE-FLHQDLKKFMDASALTG-IPLPLIK--SYLFQLLQGLAF 119
Query: 455 IHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR----SAGYRAPEV- 509
HS + H ++K N+LIN + ++DFGL VP + YRAPE+
Sbjct: 120 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 176
Query: 510 IETRKHSHKSDVYSFGVLLLEMLTGKA 536
+ + +S D++S G + EM+T +A
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRRA 203
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 119/288 (41%), Gaps = 47/288 (16%)
Query: 346 LGKGSYGTAYKA-----VLEESTTXXXXXXXXXXXXXRD---FEQQMEIVGRVGQHPNVV 397
LG+GS+G Y+ + E+ T R+ F + ++ H +VV
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HVV 80
Query: 398 PLRAYYYSKDEKLLVYDYFASGSLSTLLHGNR-----GAGRTPLDWETRVKILLGTARGV 452
L L+V + A G L + L R GR P + +++ A G+
Sbjct: 81 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 140
Query: 453 AHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG--------Y 504
A++++ KF H ++ A N ++ D I DFG+T ++ T G +
Sbjct: 141 AYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMT--RDIXETDXXRKGGKGLLPVRW 195
Query: 505 RAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTA 563
APE ++ + SD++SFGV+L E+ + + P Q + + ++
Sbjct: 196 MAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF-------------- 241
Query: 564 EVFD-VELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEE 610
V D L + N E + ++++ C P MRP E+V ++++
Sbjct: 242 -VMDGGYLDQPDNCPERVTDLMRM---CWQFNPKMRPTFLEIVNLLKD 285
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 90/223 (40%), Gaps = 34/223 (15%)
Query: 330 SYNFDLEDLLRASAEVLGKGSYGTAYKAVLEES-TTXXXXXXXXXXXXXRDFEQQMEIVG 388
S N+D++ E LGKG++ + V + + RDF Q++E
Sbjct: 28 SDNYDVK-------EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDF-QKLEREA 79
Query: 389 RVG---QHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKIL 445
R+ QHPN+V L + LV+D G L + R +
Sbjct: 80 RICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDI-----VAREFYSEADASHCI 134
Query: 446 LGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGC---ISDFGLTPLMN-------VP 495
+A+ HS G H N+K N+L+ G ++DFGL +N
Sbjct: 135 QQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFA 191
Query: 496 ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPL 538
TP GY +PEV++ +S D+++ GV+L +L G P
Sbjct: 192 GTP----GYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 230
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 114/293 (38%), Gaps = 40/293 (13%)
Query: 346 LGKGSYGTAYKA--------VLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVV 397
LG+G++G +A + R +++I+ +G H NVV
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 398 PLRAYYYSKDEKLLVYDYFAS-GSLSTLLHGNRGA-------GRTPLDWETRVKILLGTA 449
L L+V F G+LST L R + L E + A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVA 154
Query: 450 RGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAGYR---- 505
+G+ + S K H ++ A N+L+++ I DFGL + R R
Sbjct: 155 KGMEFLASR---KXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 506 --APEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTA 563
APE I R ++ +SDV+SFGVLL E+ + A SP +D EE+
Sbjct: 212 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGA---SPYPGVKID----------EEFCR 258
Query: 564 EVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDS 616
+ + MR + +M Q + C P RP E+V + + Q+++
Sbjct: 259 RLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 309
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 84/209 (40%), Gaps = 27/209 (12%)
Query: 344 EVLGKGSYGTAYKAVLEES-TTXXXXXXXXXXXXXRDFEQQMEIVGRVG---QHPNVVPL 399
E LGKG++ + V + + RDF Q++E R+ QHPN+V L
Sbjct: 12 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDF-QKLEREARICRKLQHPNIVRL 70
Query: 400 RAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMG 459
+ LV+D G L + R + +A+ HS G
Sbjct: 71 HDSIQEESFHYLVFDLVTGGELFEDI-----VAREFYSEADASHCIQQILESIAYCHSNG 125
Query: 460 GPKFTHGNIKASNVLINQDLDGC---ISDFGLTPLMN-------VPATPSRSAGYRAPEV 509
H N+K N+L+ G ++DFGL +N TP GY +PEV
Sbjct: 126 ---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTP----GYLSPEV 178
Query: 510 IETRKHSHKSDVYSFGVLLLEMLTGKAPL 538
++ +S D+++ GV+L +L G P
Sbjct: 179 LKKDPYSKPVDIWACGVILYILLVGYPPF 207
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 79/165 (47%), Gaps = 15/165 (9%)
Query: 380 FEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWE 439
E ++ ++ ++ +H N+V L Y S + LV + G L + T D
Sbjct: 67 IENEIAVLRKI-KHENIVALEDIYESPNHLYLVMQLVSGGELFDRI--VEKGFYTEKDAS 123
Query: 440 TRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLI-NQDLDG--CISDFGLTPLM---N 493
T ++ +L V ++H MG H ++K N+L +QD + ISDFGL+ + +
Sbjct: 124 TLIRQVLD---AVYYLHRMG---IVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGD 177
Query: 494 VPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPL 538
V +T + GY APEV+ + +S D +S GV+ +L G P
Sbjct: 178 VMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF 222
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 99/260 (38%), Gaps = 53/260 (20%)
Query: 383 QMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGA------GRTPL 436
+++I+ +GQH N+V L L++ +Y G L L A GR PL
Sbjct: 99 ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGR-PL 157
Query: 437 DWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLT-PLMN-- 493
+ + A+G+A + S H ++ A NVL+ I DFGL +MN
Sbjct: 158 ELRDLLHFSSQVAQGMAFLAS---KNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDS 214
Query: 494 ---VPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDL 549
V + APE I ++ +SDV+S+G+LL E+ + G P +
Sbjct: 215 NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS---- 270
Query: 550 PRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQ----------IGMACVAKVPDMRP 599
+F + ++ QM Q I AC A P RP
Sbjct: 271 ----------------------KFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRP 308
Query: 600 NMDEVVRMIEEVRQSDSENR 619
++ ++E Q D R
Sbjct: 309 TFQQICSFLQEQAQEDRRER 328
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 114/293 (38%), Gaps = 40/293 (13%)
Query: 346 LGKGSYGTAYKA--------VLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVV 397
LG+G++G +A + R +++I+ +G H NVV
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 398 PLRAYYYSKDEKLLVYDYFAS-GSLSTLLHGNRGA-------GRTPLDWETRVKILLGTA 449
L L+V F G+LST L R + L E + A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVA 154
Query: 450 RGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAGYR---- 505
+G+ + S K H ++ A N+L+++ I DFGL + R R
Sbjct: 155 KGMEFLASR---KXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 506 --APEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTA 563
APE I R ++ +SDV+SFGVLL E+ + A SP +D EE+
Sbjct: 212 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGA---SPYPGVKID----------EEFXR 258
Query: 564 EVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDS 616
+ + MR + +M Q + C P RP E+V + + Q+++
Sbjct: 259 RLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 309
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 84/209 (40%), Gaps = 27/209 (12%)
Query: 344 EVLGKGSYGTAYKAVLEES-TTXXXXXXXXXXXXXRDFEQQMEIVGRVG---QHPNVVPL 399
E LGKG++ + V + + RDF Q++E R+ QHPN+V L
Sbjct: 11 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDF-QKLEREARICRKLQHPNIVRL 69
Query: 400 RAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMG 459
+ LV+D G L + R + +A+ HS G
Sbjct: 70 HDSIQEESFHYLVFDLVTGGELFEDI-----VAREFYSEADASHCIQQILESIAYCHSNG 124
Query: 460 GPKFTHGNIKASNVLINQDLDGC---ISDFGLTPLMN-------VPATPSRSAGYRAPEV 509
H N+K N+L+ G ++DFGL +N TP GY +PEV
Sbjct: 125 ---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTP----GYLSPEV 177
Query: 510 IETRKHSHKSDVYSFGVLLLEMLTGKAPL 538
++ +S D+++ GV+L +L G P
Sbjct: 178 LKKDPYSKPVDIWACGVILYILLVGYPPF 206
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 76/163 (46%), Gaps = 15/163 (9%)
Query: 393 HPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGV 452
H +V L + ++ +Y A+G L L R +T + LL + V
Sbjct: 63 HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT--------QQLLEMCKDV 114
Query: 453 AH-IHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTP-LMNVPATPSRSAG----YRA 506
+ + +F H ++ A N L+N +SDFGL+ +++ T SR + +
Sbjct: 115 CEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSP 174
Query: 507 PEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVD 548
PEV+ K S KSD+++FGVL+ E+ + GK P + T + +
Sbjct: 175 PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAE 217
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 91/218 (41%), Gaps = 38/218 (17%)
Query: 344 EVLGKGSYGTAY---------------KAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVG 388
+VLG G+YG + VL+++T R +++
Sbjct: 60 KVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTER------QVLE 113
Query: 389 RVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLG- 447
+ Q P +V L + ++ + L+ DY G L T L + R E V+I +G
Sbjct: 114 HIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHL-----SQRERFT-EHEVQIYVGE 167
Query: 448 TARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR-----SA 502
+ H+H +G + +IK N+L++ + ++DFGL+ T +
Sbjct: 168 IVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTI 224
Query: 503 GYRAPEVIE--TRKHSHKSDVYSFGVLLLEMLTGKAPL 538
Y AP+++ H D +S GVL+ E+LTG +P
Sbjct: 225 EYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPF 262
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 87/209 (41%), Gaps = 27/209 (12%)
Query: 344 EVLGKGSYGTAYKAVLEES-TTXXXXXXXXXXXXXRDFEQQMEIVGRVG---QHPNVVPL 399
E LGKG++ + V + + RDF Q++E R+ QHPN+V L
Sbjct: 12 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDF-QKLEREARICRKLQHPNIVRL 70
Query: 400 RAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMG 459
+ LV+D G L + D ++ +L +A+ HS G
Sbjct: 71 HDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEA--DASHCIQQIL---ESIAYCHSNG 125
Query: 460 GPKFTHGNIKASNVLINQDLDGC---ISDFGLTPLMN-------VPATPSRSAGYRAPEV 509
H N+K N+L+ G ++DFGL +N TP GY +PEV
Sbjct: 126 ---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTP----GYLSPEV 178
Query: 510 IETRKHSHKSDVYSFGVLLLEMLTGKAPL 538
++ +S D+++ GV+L +L G P
Sbjct: 179 LKKDPYSKPVDIWACGVILYILLVGYPPF 207
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 87/215 (40%), Gaps = 19/215 (8%)
Query: 344 EVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQ-----QMEIVGRVGQHPNVVP 398
+V+GKGS+G A + + E+ + ++ + +HP +V
Sbjct: 44 KVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVG 103
Query: 399 LRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLG-TARGVAHIHS 457
L + + D+ V DY G L L R E R + A + ++HS
Sbjct: 104 LHFSFQTADKLYFVLDYINGGELFYHLQRERCF------LEPRARFYAAEIASALGYLHS 157
Query: 458 MGGPKFTHGNIKASNVLINQDLDGCISDFGLTPL-MNVPATPSRSAG---YRAPEVIETR 513
+ + ++K N+L++ ++DFGL + +T S G Y APEV+ +
Sbjct: 158 LN---IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQ 214
Query: 514 KHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVD 548
+ D + G +L EML G P S +M D
Sbjct: 215 PYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYD 249
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 105/259 (40%), Gaps = 36/259 (13%)
Query: 378 RDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS-GSLSTLLHGNRGA----- 431
R +++I+ +G H NVV L L+V F G+LST L R
Sbjct: 66 RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYK 125
Query: 432 ------GRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISD 485
+ L E + A+G+ + S K H ++ A N+L+++ I D
Sbjct: 126 VAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICD 182
Query: 486 FGLTPLMNVPATPSRSAGYR------APEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQ 539
FGL + R R APE I R ++ +SDV+SFGVLL E+ + A
Sbjct: 183 FGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGA--- 239
Query: 540 SPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRP 599
SP +D EE+ + + MR + +M Q + C P RP
Sbjct: 240 SPYPGVKID----------EEFCRRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRP 287
Query: 600 NMDEVVRMIEEVRQSDSEN 618
E+V + + Q++++
Sbjct: 288 TFSELVEHLGNLLQANAQQ 306
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 78/171 (45%), Gaps = 14/171 (8%)
Query: 383 QMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRV 442
Q + R HP++V L +++ ++ + G L + L + + LD + +
Sbjct: 57 QEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYS----LDLASLI 111
Query: 443 KILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSA 502
+ +A++ S +F H +I A NVL++ + + DFGL+ M S
Sbjct: 112 LYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 168
Query: 503 G-----YRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMV 547
G + APE I R+ + SDV+ FGV + E+L G P Q +D++
Sbjct: 169 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 219
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 77/171 (45%), Gaps = 14/171 (8%)
Query: 383 QMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRV 442
Q + R HP++V L +++ ++ + G L + L + LD + +
Sbjct: 63 QEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQ----VRKYSLDLASLI 117
Query: 443 KILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSA 502
+ +A++ S +F H +I A NVL++ + + DFGL+ M S
Sbjct: 118 LYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 174
Query: 503 G-----YRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMV 547
G + APE I R+ + SDV+ FGV + E+L G P Q +D++
Sbjct: 175 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 225
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 87/207 (42%), Gaps = 25/207 (12%)
Query: 343 AEVLGKGSYGTAYKA--------VLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHP 394
E +G+G+YG YKA V R+ E+ HP
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKEL-----NHP 62
Query: 395 NVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAH 454
N+V L +++++ LV++ F L + + G PL L +G+A
Sbjct: 63 NIVKLLDVIHTENKLYLVFE-FLHQDLKKFMDASALTG-IPLPLIK--SYLFQLLQGLAF 118
Query: 455 IHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR----SAGYRAPEV- 509
HS + H ++K N+LIN + ++DFGL VP + YRAPE+
Sbjct: 119 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEIL 175
Query: 510 IETRKHSHKSDVYSFGVLLLEMLTGKA 536
+ + +S D++S G + EM+T +A
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 87/207 (42%), Gaps = 25/207 (12%)
Query: 343 AEVLGKGSYGTAYKA--------VLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHP 394
E +G+G+YG YKA V R+ E+ HP
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKEL-----NHP 61
Query: 395 NVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAH 454
N+V L +++++ LV++ F L + + G PL L +G+A
Sbjct: 62 NIVKLLDVIHTENKLYLVFE-FLHQDLKKFMDASALTG-IPLPLIK--SYLFQLLQGLAF 117
Query: 455 IHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR----SAGYRAPEV- 509
HS + H ++K N+LIN + ++DFGL VP + YRAPE+
Sbjct: 118 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEIL 174
Query: 510 IETRKHSHKSDVYSFGVLLLEMLTGKA 536
+ + +S D++S G + EM+T +A
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRRA 201
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 78/171 (45%), Gaps = 14/171 (8%)
Query: 383 QMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRV 442
Q + R HP++V L +++ ++ + G L + L + + LD + +
Sbjct: 60 QEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYS----LDLASLI 114
Query: 443 KILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSA 502
+ +A++ S +F H +I A NVL++ + + DFGL+ M S
Sbjct: 115 LYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 171
Query: 503 G-----YRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMV 547
G + APE I R+ + SDV+ FGV + E+L G P Q +D++
Sbjct: 172 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 222
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 78/171 (45%), Gaps = 14/171 (8%)
Query: 383 QMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRV 442
Q + R HP++V L +++ ++ + G L + L + + LD + +
Sbjct: 60 QEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYS----LDLASLI 114
Query: 443 KILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSA 502
+ +A++ S +F H +I A NVL++ + + DFGL+ M S
Sbjct: 115 LYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 171
Query: 503 G-----YRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMV 547
G + APE I R+ + SDV+ FGV + E+L G P Q +D++
Sbjct: 172 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 222
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 78/171 (45%), Gaps = 14/171 (8%)
Query: 383 QMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRV 442
Q + R HP++V L +++ ++ + G L + L + + LD + +
Sbjct: 62 QEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYS----LDLASLI 116
Query: 443 KILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSA 502
+ +A++ S +F H +I A NVL++ + + DFGL+ M S
Sbjct: 117 LYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 173
Query: 503 G-----YRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMV 547
G + APE I R+ + SDV+ FGV + E+L G P Q +D++
Sbjct: 174 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 224
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 78/171 (45%), Gaps = 14/171 (8%)
Query: 383 QMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRV 442
Q + R HP++V L +++ ++ + G L + L + + LD + +
Sbjct: 88 QEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYS----LDLASLI 142
Query: 443 KILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSA 502
+ +A++ S +F H +I A NVL++ + + DFGL+ M S
Sbjct: 143 LYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 199
Query: 503 G-----YRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMV 547
G + APE I R+ + SDV+ FGV + E+L G P Q +D++
Sbjct: 200 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 250
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 77/171 (45%), Gaps = 14/171 (8%)
Query: 383 QMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRV 442
Q + R HP++V L +++ ++ + G L + L + LD + +
Sbjct: 65 QEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQ----VRKYSLDLASLI 119
Query: 443 KILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSA 502
+ +A++ S +F H +I A NVL++ + + DFGL+ M S
Sbjct: 120 LYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 176
Query: 503 G-----YRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMV 547
G + APE I R+ + SDV+ FGV + E+L G P Q +D++
Sbjct: 177 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 227
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 119/287 (41%), Gaps = 45/287 (15%)
Query: 346 LGKGSYGTAYKA-----VLEESTTXXXXXXXXXXXXXRD---FEQQMEIVGRVGQHPNVV 397
LG+GS+G Y+ + E+ T R+ F + ++ H +VV
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HVV 83
Query: 398 PLRAYYYSKDEKLLVYDYFASGSLSTLLHGNR-----GAGRTPLDWETRVKILLGTARGV 452
L L+V + A G L + L R GR P + +++ A G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 453 AHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG-------YR 505
A++++ KF H ++ A N ++ D I DFG+T + A R G +
Sbjct: 144 AYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAY-YRKGGKGLLPVRWM 199
Query: 506 APEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAE 564
APE ++ + SD++SFGV+L E+ + + P Q + + ++
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF--------------- 244
Query: 565 VFD-VELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEE 610
V D L + N E + ++++ C P MRP E+V ++++
Sbjct: 245 VMDGGYLDQPDNCPERVTDLMRM---CWQFNPKMRPTFLEIVNLLKD 288
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 105/259 (40%), Gaps = 36/259 (13%)
Query: 378 RDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS-GSLSTLLHGNRGA----- 431
R +++I+ +G H NVV L L+V F G+LST L R
Sbjct: 75 RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 134
Query: 432 ------GRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISD 485
+ L E + A+G+ + S K H ++ A N+L+++ I D
Sbjct: 135 VAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICD 191
Query: 486 FGLTPLMNVPATPSRSAGYR------APEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQ 539
FGL + R R APE I R ++ +SDV+SFGVLL E+ + A
Sbjct: 192 FGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGA--- 248
Query: 540 SPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRP 599
SP +D EE+ + + MR + +M Q + C P RP
Sbjct: 249 SPYPGVKID----------EEFCRRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRP 296
Query: 600 NMDEVVRMIEEVRQSDSEN 618
E+V + + Q++++
Sbjct: 297 TFSELVEHLGNLLQANAQQ 315
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 105/259 (40%), Gaps = 36/259 (13%)
Query: 378 RDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS-GSLSTLLHGNRGA----- 431
R +++I+ +G H NVV L L+V F G+LST L R
Sbjct: 66 RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 125
Query: 432 ------GRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISD 485
+ L E + A+G+ + S K H ++ A N+L+++ I D
Sbjct: 126 VAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICD 182
Query: 486 FGLTPLMNVPATPSRSAGYR------APEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQ 539
FGL + R R APE I R ++ +SDV+SFGVLL E+ + A
Sbjct: 183 FGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGA--- 239
Query: 540 SPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRP 599
SP +D EE+ + + MR + +M Q + C P RP
Sbjct: 240 SPYPGVKID----------EEFCRRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRP 287
Query: 600 NMDEVVRMIEEVRQSDSEN 618
E+V + + Q++++
Sbjct: 288 TFSELVEHLGNLLQANAQQ 306
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 105/259 (40%), Gaps = 36/259 (13%)
Query: 378 RDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS-GSLSTLLHGNRGA----- 431
R +++I+ +G H NVV L L+V F G+LST L R
Sbjct: 66 RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYK 125
Query: 432 ------GRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISD 485
+ L E + A+G+ + S K H ++ A N+L+++ I D
Sbjct: 126 VAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICD 182
Query: 486 FGLTPLMNVPATPSRSAGYR------APEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQ 539
FGL + R R APE I R ++ +SDV+SFGVLL E+ + A
Sbjct: 183 FGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGA--- 239
Query: 540 SPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRP 599
SP +D EE+ + + MR + +M Q + C P RP
Sbjct: 240 SPYPGVKID----------EEFCRRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRP 287
Query: 600 NMDEVVRMIEEVRQSDSEN 618
E+V + + Q++++
Sbjct: 288 TFSELVEHLGNLLQANAQQ 306
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 96/217 (44%), Gaps = 20/217 (9%)
Query: 345 VLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEI----VGRVGQHPNVVPLR 400
+G GSYG K + +S + E+QM + + R +HPN+V R
Sbjct: 13 TIGTGSYGRCQK-IRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIV--R 69
Query: 401 AYYYSKDEK----LLVYDYFASGSLSTLLHGNRGAG-RTPLDWE--TRVKILLGTARGVA 453
Y D +V +Y G L++++ +G R LD E RV L A
Sbjct: 70 YYDRIIDRTNTTLYIVMEYCEGGDLASVI--TKGTKERQYLDEEFVLRVMTQLTLALKEC 127
Query: 454 HIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR----SAGYRAPEV 509
H S GG H ++K +NV ++ + + DFGL ++N ++ + Y +PE
Sbjct: 128 HRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGTPYYMSPEQ 187
Query: 510 IETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDM 546
+ ++ KSD++S G LL E+ P + ++ ++
Sbjct: 188 MNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKEL 224
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 76/157 (48%), Gaps = 14/157 (8%)
Query: 387 VGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILL 446
+ +V HPN+V L ++ LV +Y + G + L + GR + E R K
Sbjct: 66 IMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH---GRMK-EKEARAK-FR 120
Query: 447 GTARGVAHIHSMGGPKF-THGNIKASNVLINQDLDGCISDFGLT---PLMNVPATPSRSA 502
V + H KF H ++KA N+L++ D++ I+DFG + N T S
Sbjct: 121 QIVSAVQYCHQ----KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSP 176
Query: 503 GYRAPEVIETRKHSH-KSDVYSFGVLLLEMLTGKAPL 538
Y APE+ + +K+ + DV+S GV+L +++G P
Sbjct: 177 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 76/157 (48%), Gaps = 14/157 (8%)
Query: 387 VGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILL 446
+ +V HPN+V L ++ LV +Y + G + L + GR + E R K
Sbjct: 66 IMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH---GRMK-EKEARAK-FR 120
Query: 447 GTARGVAHIHSMGGPKF-THGNIKASNVLINQDLDGCISDFGLT---PLMNVPATPSRSA 502
V + H KF H ++KA N+L++ D++ I+DFG + N T S
Sbjct: 121 QIVSAVQYCHQ----KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSP 176
Query: 503 GYRAPEVIETRKHSH-KSDVYSFGVLLLEMLTGKAPL 538
Y APE+ + +K+ + DV+S GV+L +++G P
Sbjct: 177 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 105/259 (40%), Gaps = 36/259 (13%)
Query: 378 RDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS-GSLSTLLHGNRGA----- 431
R +++I+ +G H NVV L L+V F G+LST L R
Sbjct: 75 RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 134
Query: 432 ------GRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISD 485
+ L E + A+G+ + S K H ++ A N+L+++ I D
Sbjct: 135 VAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICD 191
Query: 486 FGLTPLMNVPATPSRSAGYR------APEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQ 539
FGL + R R APE I R ++ +SDV+SFGVLL E+ + A
Sbjct: 192 FGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGA--- 248
Query: 540 SPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRP 599
SP +D EE+ + + MR + +M Q + C P RP
Sbjct: 249 SPYPGVKID----------EEFCRRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRP 296
Query: 600 NMDEVVRMIEEVRQSDSEN 618
E+V + + Q++++
Sbjct: 297 TFSELVEHLGNLLQANAQQ 315
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 76/157 (48%), Gaps = 14/157 (8%)
Query: 387 VGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILL 446
+ +V HPN+V L ++ LV +Y + G + L + GR + E R K
Sbjct: 66 IMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH---GRMK-EKEARAK-FR 120
Query: 447 GTARGVAHIHSMGGPKF-THGNIKASNVLINQDLDGCISDFGLT---PLMNVPATPSRSA 502
V + H KF H ++KA N+L++ D++ I+DFG + N T S
Sbjct: 121 QIVSAVQYCHQ----KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSP 176
Query: 503 GYRAPEVIETRKHSH-KSDVYSFGVLLLEMLTGKAPL 538
Y APE+ + +K+ + DV+S GV+L +++G P
Sbjct: 177 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 88/207 (42%), Gaps = 25/207 (12%)
Query: 343 AEVLGKGSYGTAYKA--------VLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHP 394
E +G+G+YG YKA V + R+ E+ HP
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-----NHP 65
Query: 395 NVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAH 454
N+V L +++++ LV+++ L + + G PL L +G+A
Sbjct: 66 NIVKLLDVIHTENKLYLVFEH-VDQDLKKFMDASALTG-IPLPLIK--SYLFQLLQGLAF 121
Query: 455 IHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR----SAGYRAPEV- 509
HS + H ++K N+LIN + ++DFGL VP + YRAPE+
Sbjct: 122 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 178
Query: 510 IETRKHSHKSDVYSFGVLLLEMLTGKA 536
+ + +S D++S G + EM+T +A
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRRA 205
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 88/207 (42%), Gaps = 25/207 (12%)
Query: 343 AEVLGKGSYGTAYKA--------VLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHP 394
E +G+G+YG YKA V + R+ E+ HP
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-----NHP 62
Query: 395 NVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAH 454
N+V L +++++ LV++ F L + + G PL L +G++
Sbjct: 63 NIVKLLDVIHTENKLYLVFE-FLHQDLKKFMDASALTG-IPLPLIK--SYLFQLLQGLSF 118
Query: 455 IHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR----SAGYRAPEV- 509
HS + H ++K N+LIN + ++DFGL VP + YRAPE+
Sbjct: 119 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEIL 175
Query: 510 IETRKHSHKSDVYSFGVLLLEMLTGKA 536
+ + +S D++S G + EM+T +A
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 91/207 (43%), Gaps = 24/207 (11%)
Query: 346 LGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVG-RVGQHPNVVPLRAYYY 404
+G G++G A + + ++ D + EI+ R +HPN+V +
Sbjct: 27 IGAGNFGVA-RLMRDKQANELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVIL 85
Query: 405 SKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFT 464
+ +V +Y + G L + AGR D E R GV++ H+M +
Sbjct: 86 TPTHLAIVMEYASGGELFERIC---NAGRFSED-EARF-FFQQLISGVSYAHAM---QVA 137
Query: 465 HGNIKASNVLINQDLDGC------ISDFGLTPLMNVPATPSRSAG---YRAPEVIETRKH 515
H ++K N L LDG I+DFG + + + P + G Y APEV+ +++
Sbjct: 138 HRDLKLENTL----LDGSPAPRLKIADFGYSKASVLHSQPKSAVGTPAYIAPEVLLKKEY 193
Query: 516 SHK-SDVYSFGVLLLEMLTGKAPLQSP 541
K +DV+S GV L ML G P + P
Sbjct: 194 DGKVADVWSCGVTLYVMLVGAYPFEDP 220
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 78/171 (45%), Gaps = 14/171 (8%)
Query: 383 QMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRV 442
Q + R HP++V L +++ ++ + G L + L + + LD + +
Sbjct: 440 QEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKFS----LDLASLI 494
Query: 443 KILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSA 502
+ +A++ S +F H +I A NVL++ + + DFGL+ M S
Sbjct: 495 LYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 551
Query: 503 G-----YRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMV 547
G + APE I R+ + SDV+ FGV + E+L G P Q +D++
Sbjct: 552 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 602
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 107/251 (42%), Gaps = 26/251 (10%)
Query: 341 ASAEVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQ--HPNVVP 398
+ E+LG G +G +K E +T +D E+ + + Q H N++
Sbjct: 92 SKTEILGGGRFGQVHKCE-ETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQ 150
Query: 399 LRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSM 458
L + SK++ +LV +Y G L + + T LD + + G+ H+H M
Sbjct: 151 LYDAFESKNDIVLVMEYVDGGELFDRI-IDESYNLTELD---TILFMKQICEGIRHMHQM 206
Query: 459 GGPKFTHGNIKASNVL-INQDLDGC-ISDFGLTPLMNVPATPSRSAG---YRAPEVIETR 513
H ++K N+L +N+D I DFGL + G + APEV+
Sbjct: 207 ---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYD 263
Query: 514 KHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRF 573
S +D++S GV+ +L+G +P + ++ +++ W D+E F
Sbjct: 264 FVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLN------NILACRW-----DLEDEEF 312
Query: 574 QNIEEEMVQML 584
Q+I EE + +
Sbjct: 313 QDISEEAKEFI 323
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 89/211 (42%), Gaps = 17/211 (8%)
Query: 345 VLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRV-----GQHPNVVPL 399
VLGKGS+G + + + +D + + +V + G+ P + L
Sbjct: 27 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQL 86
Query: 400 RAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMG 459
+ + + D V +Y G L + G + P V A G+ + S G
Sbjct: 87 HSCFQTMDRLYFVMEYVNGGDLMYHIQ-QVGRFKEP----HAVFYAAEIAIGLFFLQSKG 141
Query: 460 GPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR----SAGYRAPEVIETRKH 515
+ ++K NV+++ + I+DFG+ ++ + Y APE+I + +
Sbjct: 142 ---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPY 198
Query: 516 SHKSDVYSFGVLLLEMLTGKAPLQSPTRDDM 546
D ++FGVLL EML G+AP + D++
Sbjct: 199 GKSVDWWAFGVLLYEMLAGQAPFEGEDEDEL 229
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 105/259 (40%), Gaps = 36/259 (13%)
Query: 378 RDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS-GSLSTLLHGNRGA----- 431
R +++I+ +G H NVV L L+V F G+LST L R
Sbjct: 112 RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 171
Query: 432 ------GRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISD 485
+ L E + A+G+ + S K H ++ A N+L+++ I D
Sbjct: 172 VAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICD 228
Query: 486 FGLTPLMNVPATPSRSAGYR------APEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQ 539
FGL + R R APE I R ++ +SDV+SFGVLL E+ + A
Sbjct: 229 FGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGA--- 285
Query: 540 SPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRP 599
SP +D EE+ + + MR + +M Q + C P RP
Sbjct: 286 SPYPGVKID----------EEFCRRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRP 333
Query: 600 NMDEVVRMIEEVRQSDSEN 618
E+V + + Q++++
Sbjct: 334 TFSELVEHLGNLLQANAQQ 352
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 119/288 (41%), Gaps = 47/288 (16%)
Query: 346 LGKGSYGTAYKA-----VLEESTTXXXXXXXXXXXXXRD---FEQQMEIVGRVGQHPNVV 397
LG+GS+G Y+ + E+ T R+ F + ++ H +VV
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HVV 83
Query: 398 PLRAYYYSKDEKLLVYDYFASGSLSTLLHGNR-----GAGRTPLDWETRVKILLGTARGV 452
L L+V + A G L + L R GR P + +++ A G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 453 AHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG--------Y 504
A++++ KF H ++ A N ++ D I DFG+T ++ T G +
Sbjct: 144 AYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMT--RDIYETDYYRKGGKGLLPVRW 198
Query: 505 RAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTA 563
APE ++ + SD++SFGV+L E+ + + P Q + + ++
Sbjct: 199 MAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF-------------- 244
Query: 564 EVFD-VELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEE 610
V D L + N E + ++++ C P MRP E+V ++++
Sbjct: 245 -VMDGGYLDQPDNCPERVTDLMRM---CWQFNPKMRPTFLEIVNLLKD 288
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 77/164 (46%), Gaps = 17/164 (10%)
Query: 379 DFEQQMEIVGRVGQHPNVVPLRAYYYSK--DEKLLVYDYFASGSLSTLLHGNRGAGRTPL 436
D ++++EI+ R H N+V + + L+ ++ SGSL L N+ +
Sbjct: 69 DLKKEIEIL-RNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNK----I 123
Query: 437 DWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM---- 492
+ + ++K + +G+ + +G ++ H ++ A NVL+ + I DFGLT +
Sbjct: 124 NLKQQLKYAVQICKGMDY---LGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDK 180
Query: 493 ---NVPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT 533
V + APE + K SDV+SFGV L E+LT
Sbjct: 181 EXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 81/170 (47%), Gaps = 21/170 (12%)
Query: 382 QQMEIVGRVGQ---------HPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAG 432
+ +++VG++ + HP+++ L + + +V +Y + G L + + G
Sbjct: 50 RSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKH---G 106
Query: 433 RTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM 492
R R+ + +A H H + H ++K NVL++ ++ I+DFGL+ +M
Sbjct: 107 RVEEMEARRLFQQILSAVDYCHRHMV-----VHRDLKPENVLLDAHMNAKIADFGLSNMM 161
Query: 493 N---VPATPSRSAGYRAPEVIETRKHSH-KSDVYSFGVLLLEMLTGKAPL 538
+ T S Y APEVI R ++ + D++S GV+L +L G P
Sbjct: 162 SDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPF 211
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 77/164 (46%), Gaps = 17/164 (10%)
Query: 379 DFEQQMEIVGRVGQHPNVVPLRAYYYSK--DEKLLVYDYFASGSLSTLLHGNRGAGRTPL 436
D ++++EI+ R H N+V + + L+ ++ SGSL L N+ +
Sbjct: 57 DLKKEIEIL-RNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNK----I 111
Query: 437 DWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM---- 492
+ + ++K + +G+ + +G ++ H ++ A NVL+ + I DFGLT +
Sbjct: 112 NLKQQLKYAVQICKGMDY---LGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDK 168
Query: 493 ---NVPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT 533
V + APE + K SDV+SFGV L E+LT
Sbjct: 169 EXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 105/259 (40%), Gaps = 36/259 (13%)
Query: 378 RDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS-GSLSTLLHGNRGA----- 431
R +++I+ +G H NVV L L+V F G+LST L R
Sbjct: 77 RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 136
Query: 432 ------GRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISD 485
+ L E + A+G+ + S K H ++ A N+L+++ I D
Sbjct: 137 EAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICD 193
Query: 486 FGLTPLMNVPATPSRSAGYR------APEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQ 539
FGL + R R APE I R ++ +SDV+SFGVLL E+ + A
Sbjct: 194 FGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGA--- 250
Query: 540 SPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRP 599
SP +D EE+ + + MR + +M Q + C P RP
Sbjct: 251 SPYPGVKID----------EEFCRRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRP 298
Query: 600 NMDEVVRMIEEVRQSDSEN 618
E+V + + Q++++
Sbjct: 299 TFSELVEHLGNLLQANAQQ 317
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 105/259 (40%), Gaps = 36/259 (13%)
Query: 378 RDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS-GSLSTLLHGNRGA----- 431
R +++I+ +G H NVV L L+V F G+LST L R
Sbjct: 75 RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 134
Query: 432 ------GRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISD 485
+ L E + A+G+ + S K H ++ A N+L+++ I D
Sbjct: 135 VAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICD 191
Query: 486 FGLTPLMNVPATPSRSAGYR------APEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQ 539
FGL + R R APE I R ++ +SDV+SFGVLL E+ + A
Sbjct: 192 FGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGA--- 248
Query: 540 SPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRP 599
SP +D EE+ + + MR + +M Q + C P RP
Sbjct: 249 SPYPGVKID----------EEFCRRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRP 296
Query: 600 NMDEVVRMIEEVRQSDSEN 618
E+V + + Q++++
Sbjct: 297 TFSELVEHLGNLLQANAQQ 315
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 66/150 (44%), Gaps = 13/150 (8%)
Query: 396 VVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHI 455
VV L Y +KD LV G L ++ AG + + A +
Sbjct: 246 VVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFP------EARAVFYAAEICCGL 299
Query: 456 HSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPS-----RSAGYRAPEVI 510
+ + + ++K N+L++ ISD GL ++VP + + GY APEV+
Sbjct: 300 EDLHRERIVYRDLKPENILLDDHGHIRISDLGLA--VHVPEGQTIKGRVGTVGYMAPEVV 357
Query: 511 ETRKHSHKSDVYSFGVLLLEMLTGKAPLQS 540
+ +++ D ++ G LL EM+ G++P Q
Sbjct: 358 KNERYTFSPDWWALGCLLYEMIAGQSPFQQ 387
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 119/288 (41%), Gaps = 47/288 (16%)
Query: 346 LGKGSYGTAYKA-----VLEESTTXXXXXXXXXXXXXRD---FEQQMEIVGRVGQHPNVV 397
LG+GS+G Y+ + E+ T R+ F + ++ H +VV
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HVV 82
Query: 398 PLRAYYYSKDEKLLVYDYFASGSLSTLLHGNR-----GAGRTPLDWETRVKILLGTARGV 452
L L+V + A G L + L R GR P + +++ A G+
Sbjct: 83 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 142
Query: 453 AHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG--------Y 504
A++++ KF H ++ A N ++ D I DFG+T ++ T G +
Sbjct: 143 AYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMT--RDIYETDYYRKGGKGLLPVRW 197
Query: 505 RAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTA 563
APE ++ + SD++SFGV+L E+ + + P Q + + ++
Sbjct: 198 MAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF-------------- 243
Query: 564 EVFD-VELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEE 610
V D L + N E + ++++ C P MRP E+V ++++
Sbjct: 244 -VMDGGYLDQPDNCPERVTDLMRM---CWQFNPKMRPTFLEIVNLLKD 287
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 66/150 (44%), Gaps = 13/150 (8%)
Query: 396 VVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHI 455
VV L Y +KD LV G L ++ AG + + A +
Sbjct: 246 VVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFP------EARAVFYAAEICCGL 299
Query: 456 HSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPS-----RSAGYRAPEVI 510
+ + + ++K N+L++ ISD GL ++VP + + GY APEV+
Sbjct: 300 EDLHRERIVYRDLKPENILLDDHGHIRISDLGLA--VHVPEGQTIKGRVGTVGYMAPEVV 357
Query: 511 ETRKHSHKSDVYSFGVLLLEMLTGKAPLQS 540
+ +++ D ++ G LL EM+ G++P Q
Sbjct: 358 KNERYTFSPDWWALGCLLYEMIAGQSPFQQ 387
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 89/211 (42%), Gaps = 17/211 (8%)
Query: 345 VLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRV-----GQHPNVVPL 399
VLGKGS+G + + + +D + + +V + G+ P + L
Sbjct: 348 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQL 407
Query: 400 RAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMG 459
+ + + D V +Y G L + G + P V A G+ + S G
Sbjct: 408 HSCFQTMDRLYFVMEYVNGGDLMYHIQ-QVGRFKEP----HAVFYAAEIAIGLFFLQSKG 462
Query: 460 GPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR----SAGYRAPEVIETRKH 515
+ ++K NV+++ + I+DFG+ ++ + Y APE+I + +
Sbjct: 463 ---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPY 519
Query: 516 SHKSDVYSFGVLLLEMLTGKAPLQSPTRDDM 546
D ++FGVLL EML G+AP + D++
Sbjct: 520 GKSVDWWAFGVLLYEMLAGQAPFEGEDEDEL 550
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 98/256 (38%), Gaps = 53/256 (20%)
Query: 383 QMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGA------GRTPL 436
+++I+ +GQH N+V L L++ +Y G L L A GR PL
Sbjct: 91 ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGR-PL 149
Query: 437 DWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLT-PLMN-- 493
+ + A+G+A + S H ++ A NVL+ I DFGL +MN
Sbjct: 150 ELRDLLHFSSQVAQGMAFLAS---KNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDS 206
Query: 494 ---VPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDL 549
V + APE I ++ +SDV+S+G+LL E+ + G P +
Sbjct: 207 NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS---- 262
Query: 550 PRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQ----------IGMACVAKVPDMRP 599
+F + ++ QM Q I AC A P RP
Sbjct: 263 ----------------------KFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRP 300
Query: 600 NMDEVVRMIEEVRQSD 615
++ ++E Q D
Sbjct: 301 TFQQICSFLQEQAQED 316
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 77/171 (45%), Gaps = 14/171 (8%)
Query: 383 QMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRV 442
Q + R HP++V L +++ ++ + G L + L + + LD + +
Sbjct: 60 QEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKFS----LDLASLI 114
Query: 443 KILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSA 502
+ +A++ S +F H +I A NVL++ + DFGL+ M S
Sbjct: 115 LYAYQLSTALAYLES---KRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASK 171
Query: 503 G-----YRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMV 547
G + APE I R+ + SDV+ FGV + E+L G P Q +D++
Sbjct: 172 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 222
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 55/99 (55%), Gaps = 6/99 (6%)
Query: 448 TARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR------S 501
TA V+ + + G H ++K N+L+N+D+ I+DFG +++ + +R +
Sbjct: 138 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 197
Query: 502 AGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQS 540
A Y +PE++ + S SD+++ G ++ +++ G P ++
Sbjct: 198 AQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPPFRA 236
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 73/156 (46%), Gaps = 12/156 (7%)
Query: 387 VGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILL 446
+ ++ HPN+V L ++ LV +Y + G + L + GR + E R K
Sbjct: 67 IMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH---GRMK-EKEARAK-FR 121
Query: 447 GTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG--- 503
V + H H ++KA N+L++ D++ I+DFG + V G
Sbjct: 122 QIVSAVQYCHQ---KYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFCGSPP 178
Query: 504 YRAPEVIETRKHSH-KSDVYSFGVLLLEMLTGKAPL 538
Y APE+ + +K+ + DV+S GV+L +++G P
Sbjct: 179 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 214
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 91/207 (43%), Gaps = 24/207 (11%)
Query: 346 LGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVG-RVGQHPNVVPLRAYYY 404
+G G++G A + + ++ + D + EI+ R +HPN+V +
Sbjct: 26 IGSGNFGVA-RLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVIL 84
Query: 405 SKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFT 464
+ +V +Y + G L + AGR D E R GV++ H+M +
Sbjct: 85 TPTHLAIVMEYASGGELFERI---CNAGRFSED-EARF-FFQQLISGVSYCHAM---QVC 136
Query: 465 HGNIKASNVLINQDLDGC------ISDFGLTPLMNVPATPSRSAG---YRAPEVIETRKH 515
H ++K N L LDG I DFG + + + P + G Y APEV+ +++
Sbjct: 137 HRDLKLENTL----LDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEY 192
Query: 516 SHK-SDVYSFGVLLLEMLTGKAPLQSP 541
K +DV+S GV L ML G P + P
Sbjct: 193 DGKVADVWSCGVTLYVMLVGAYPFEDP 219
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 100/230 (43%), Gaps = 39/230 (16%)
Query: 339 LRASAEVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFE-QQMEIVGRVGQHPNVV 397
L S ++LG GS GT V + S D +++++ HPNV+
Sbjct: 34 LVVSEKILGYGSSGTV---VFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVI 90
Query: 398 PLRAYYYSK--DEKLLVYDYFASGSLSTLLHG-NRGAGRTPLDWETR-VKILLGTARGVA 453
YY S+ D L + + +L L+ N L E + +L A GVA
Sbjct: 91 ---RYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVA 147
Query: 454 HIHSMGGPKFTHGNIKASNVLIN-------------QDLDGCISDFGLTPLMNVPA---- 496
H+HS+ K H ++K N+L++ ++L ISDFGL ++
Sbjct: 148 HLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFR 204
Query: 497 ----TPSRSAGYRAPEVIE---TRKHSHKSDVYSFGVLLLEMLT-GKAPL 538
PS ++G+RAPE++E R+ + D++S G + +L+ GK P
Sbjct: 205 XNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPF 254
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 81/170 (47%), Gaps = 21/170 (12%)
Query: 382 QQMEIVGRVGQ---------HPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAG 432
+ +++VG++ + HP+++ L + + +V +Y + G L + + G
Sbjct: 50 RSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKH---G 106
Query: 433 RTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM 492
R R+ + +A H H + H ++K NVL++ ++ I+DFGL+ +M
Sbjct: 107 RVEEMEARRLFQQILSAVDYCHRHMV-----VHRDLKPENVLLDAHMNAKIADFGLSNMM 161
Query: 493 NVPATPSRSAG---YRAPEVIETRKHSH-KSDVYSFGVLLLEMLTGKAPL 538
+ S G Y APEVI R ++ + D++S GV+L +L G P
Sbjct: 162 SDGEFLRDSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPF 211
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 81/185 (43%), Gaps = 26/185 (14%)
Query: 451 GVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAGYR----- 505
G+A++H+ + H ++ A NVL++ D I DFGL A P YR
Sbjct: 146 GMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAK-----AVPEGHEXYRVREDG 197
Query: 506 -------APEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRD--DMVDLPRWVQSV 556
APE ++ K + SDV+SFGV L E+LT QSP +++ + + +V
Sbjct: 198 DSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTV 257
Query: 557 VREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDS 616
+R E + L R E+ +++ C RP + ++ +++ V +
Sbjct: 258 LRLTELLERGE-RLPRPDKCPAEVYHLMK---NCWETEASFRPTFENLIPILKTVHEKYQ 313
Query: 617 ENRPS 621
PS
Sbjct: 314 GQAPS 318
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 74/157 (47%), Gaps = 14/157 (8%)
Query: 387 VGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILL 446
+ +V HPN+V L ++ LV +Y + G + L + GR + E R K
Sbjct: 66 IMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH---GRMK-EKEARAK-FR 120
Query: 447 GTARGVAHIHSMGGPKF-THGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG-- 503
V + H KF H ++KA N+L++ D++ I+DFG + G
Sbjct: 121 QIVSAVQYCHQ----KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFCGSP 176
Query: 504 -YRAPEVIETRKHSH-KSDVYSFGVLLLEMLTGKAPL 538
Y APE+ + +K+ + DV+S GV+L +++G P
Sbjct: 177 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 71/157 (45%), Gaps = 17/157 (10%)
Query: 396 VVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHI 455
+ L + ++ LV DY+ G L TLL ++ + P E + +G V I
Sbjct: 136 ITALHYAFQDENHLYLVMDYYVGGDLLTLL--SKFEDKLP---EDMARFYIGEM--VLAI 188
Query: 456 HSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG-----YRAPEVI 510
S+ + H +IK NVL++ + ++DFG MN T S Y +PE++
Sbjct: 189 DSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEIL 248
Query: 511 ETR-----KHSHKSDVYSFGVLLLEMLTGKAPLQSPT 542
+ K+ + D +S GV + EML G+ P + +
Sbjct: 249 QAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAES 285
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 71/157 (45%), Gaps = 17/157 (10%)
Query: 396 VVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHI 455
+ L + ++ LV DY+ G L TLL ++ + P E + +G V I
Sbjct: 152 ITALHYAFQDENHLYLVMDYYVGGDLLTLL--SKFEDKLP---EDMARFYIGEM--VLAI 204
Query: 456 HSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG-----YRAPEVI 510
S+ + H +IK NVL++ + ++DFG MN T S Y +PE++
Sbjct: 205 DSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEIL 264
Query: 511 ETR-----KHSHKSDVYSFGVLLLEMLTGKAPLQSPT 542
+ K+ + D +S GV + EML G+ P + +
Sbjct: 265 QAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAES 301
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 100/230 (43%), Gaps = 39/230 (16%)
Query: 339 LRASAEVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFE-QQMEIVGRVGQHPNVV 397
L S ++LG GS GT V + S D +++++ HPNV+
Sbjct: 34 LVVSEKILGYGSSGTV---VFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVI 90
Query: 398 PLRAYYYSK--DEKLLVYDYFASGSLSTLLHG-NRGAGRTPLDWETR-VKILLGTARGVA 453
YY S+ D L + + +L L+ N L E + +L A GVA
Sbjct: 91 ---RYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVA 147
Query: 454 HIHSMGGPKFTHGNIKASNVLIN-------------QDLDGCISDFGLTPLMNVPA---- 496
H+HS+ K H ++K N+L++ ++L ISDFGL ++
Sbjct: 148 HLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFR 204
Query: 497 ----TPSRSAGYRAPEVIE---TRKHSHKSDVYSFGVLLLEMLT-GKAPL 538
PS ++G+RAPE++E R+ + D++S G + +L+ GK P
Sbjct: 205 XNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPF 254
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/267 (21%), Positives = 108/267 (40%), Gaps = 49/267 (18%)
Query: 378 RDFEQQMEIVGRVGQHPNVVPL-RAYYYSKDE------KLLVYDYFASGSLSTLLHGNRG 430
R Q++ + ++ HPN+V A K+E + L+ G L L +
Sbjct: 70 RAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFL--KKM 127
Query: 431 AGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFG-LT 489
R PL +T +KI T R V H+H P H ++K N+L++ + DFG T
Sbjct: 128 ESRGPLSCDTVLKIFYQTCRAVQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSAT 186
Query: 490 PLMNVP---------------ATPSRSAGYRAPEVIETRKH---SHKSDVYSFGVLLLEM 531
+ + P T + + YR PE+I+ + K D+++ G +L +
Sbjct: 187 TISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLL 246
Query: 532 LTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACV 591
+ P + + +V +++ D + F ++ M+Q+
Sbjct: 247 CFRQHPFEDGAK----------LRIVNGKYSIPPHDTQYTVFHSLIRAMLQV-------- 288
Query: 592 AKVPDMRPNMDEVVRMIEEVRQSDSEN 618
P+ R ++ EVV ++E+ + + N
Sbjct: 289 --NPEERLSIAEVVHQLQEIAAARNVN 313
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 76/170 (44%), Gaps = 25/170 (14%)
Query: 382 QQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETR 441
++ I+ +V HP+++ L Y S LV+D G L L ETR
Sbjct: 148 RETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEK----ETR 203
Query: 442 VKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLT-------PLMNV 494
I+ V+ +H+ H ++K N+L++ ++ +SDFG + L +
Sbjct: 204 -SIMRSLLEAVSFLHANN---IVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLREL 259
Query: 495 PATPSRSAGYRAPEVIE-TRKHSH-----KSDVYSFGVLLLEMLTGKAPL 538
TP GY APE+++ + +H + D+++ GV+L +L G P
Sbjct: 260 CGTP----GYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPF 305
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 88/211 (41%), Gaps = 17/211 (8%)
Query: 345 VLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGR-----VGQHPNVVPL 399
VLGKGS+G A + + +D + + +V + + + P + L
Sbjct: 26 VLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQL 85
Query: 400 RAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMG 459
+ + + D V +Y G L + G + P V + G+ +H G
Sbjct: 86 HSCFQTVDRLYFVMEYVNGGDLMYHIQ-QVGKFKEP----QAVFYAAEISIGLFFLHKRG 140
Query: 460 GPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR----SAGYRAPEVIETRKH 515
+ ++K NV+++ + I+DFG+ + +R + Y APE+I + +
Sbjct: 141 ---IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIAYQPY 197
Query: 516 SHKSDVYSFGVLLLEMLTGKAPLQSPTRDDM 546
D +++GVLL EML G+ P D++
Sbjct: 198 GKSVDWWAYGVLLYEMLAGQPPFDGEDEDEL 228
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 55/100 (55%), Gaps = 6/100 (6%)
Query: 439 ETRVKILL-GTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPAT 497
E R++ L+ +G+ +IH+ G H ++K N+ +N+D + I DFGL +
Sbjct: 127 EDRIQFLVYQMLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLARQADSEMX 183
Query: 498 PS-RSAGYRAPEVI-ETRKHSHKSDVYSFGVLLLEMLTGK 535
+ YRAPEVI +++ D++S G ++ EM+TGK
Sbjct: 184 GXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 79/179 (44%), Gaps = 35/179 (19%)
Query: 380 FEQQMEIVGRVGQHPNVVPLRAYYYSKDEK--LLVYDYFASGSLSTLLHGNRGAGRTPLD 437
+++++EI+ R H ++V + + EK LV +Y GSL L P
Sbjct: 57 WQREIEIL-RTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL---------PRH 106
Query: 438 WETRVKILL---GTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV 494
++LL G+A++H+ + H + A NVL++ D I DFGL
Sbjct: 107 CVGLAQLLLFAQQICEGMAYLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAK---- 159
Query: 495 PATPSRSAGYR------------APEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSP 541
A P YR APE ++ K + SDV+SFGV L E+LT QSP
Sbjct: 160 -AVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLTYCDSNQSP 217
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
Query: 450 RGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSA-GYRAPE 508
RG+ +IHS H ++K SN+ +N+D + I DFGL + T + YRAPE
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGXVATRWYRAPE 192
Query: 509 VIETRKHSHKS-DVYSFGVLLLEMLTGKA 536
++ H +++ D++S G ++ E+LTG+
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 79/179 (44%), Gaps = 35/179 (19%)
Query: 380 FEQQMEIVGRVGQHPNVVPLRAYYYSKDEK--LLVYDYFASGSLSTLLHGNRGAGRTPLD 437
+++++EI+ R H ++V + + EK LV +Y GSL L P
Sbjct: 58 WQREIEIL-RTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL---------PRH 107
Query: 438 WETRVKILL---GTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV 494
++LL G+A++H+ + H + A NVL++ D I DFGL
Sbjct: 108 CVGLAQLLLFAQQICEGMAYLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAK---- 160
Query: 495 PATPSRSAGYR------------APEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSP 541
A P YR APE ++ K + SDV+SFGV L E+LT QSP
Sbjct: 161 -AVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLTYCDSNQSP 218
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 77/171 (45%), Gaps = 14/171 (8%)
Query: 383 QMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRV 442
Q + R HP++V L +++ ++ + G L + L + + LD + +
Sbjct: 440 QEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKFS----LDLASLI 494
Query: 443 KILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSA 502
+ +A++ S +F H +I A NVL++ + DFGL+ M S
Sbjct: 495 LYAYQLSTALAYLES---KRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASK 551
Query: 503 G-----YRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMV 547
G + APE I R+ + SDV+ FGV + E+L G P Q +D++
Sbjct: 552 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 602
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
Query: 450 RGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSA-GYRAPE 508
RG+ +IHS H ++K SN+ +N+D + I DFGL + T + YRAPE
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 192
Query: 509 VIETRKHSHKS-DVYSFGVLLLEMLTGKA 536
++ H +++ D++S G ++ E+LTG+
Sbjct: 193 IMLNAMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
Query: 450 RGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSA-GYRAPE 508
RG+ +IHS H ++K SN+ +N+D + I DFGL + T + YRAPE
Sbjct: 147 RGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPE 203
Query: 509 VIETRKHSHKS-DVYSFGVLLLEMLTGKA 536
++ H +++ D++S G ++ E+LTG+
Sbjct: 204 IMLNWMHYNQTVDIWSVGCIMAELLTGRT 232
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 81/186 (43%), Gaps = 26/186 (13%)
Query: 430 GAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLT 489
G + P+ E + ARG+ + S K H ++ A N+L++++ I DFGL
Sbjct: 190 GFYKEPITMEDLISYSFQVARGMEFLSSR---KCIHRDLAARNILLSENNVVKICDFGLA 246
Query: 490 PLMNVPATPSRSAGYR------APEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPT 542
+ R R APE I + +S KSDV+S+GVLL E+ + G +P
Sbjct: 247 RDIYKNPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQ 306
Query: 543 RDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMD 602
D E++ + + E MR + E ++ QI + C + P RP
Sbjct: 307 MD--------------EDFCSRL--REGMRMRAPEYSTPEIYQIMLDCWHRDPKERPRFA 350
Query: 603 EVVRMI 608
E+V +
Sbjct: 351 ELVEKL 356
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
Query: 450 RGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSA-GYRAPE 508
RG+ +IHS H ++K SN+ +N+D + I DFGL + T + YRAPE
Sbjct: 141 RGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPE 197
Query: 509 VIETRKHSHKS-DVYSFGVLLLEMLTGKA 536
++ H +++ D++S G ++ E+LTG+
Sbjct: 198 IMLNWMHYNQTVDIWSVGCIMAELLTGRT 226
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 102/237 (43%), Gaps = 27/237 (11%)
Query: 333 FDLEDLLRASAEVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRD---FEQQMEIVGR 389
+D D+L E LG G++G ++ V E++T D + ++ I+ +
Sbjct: 50 YDYYDIL----EELGSGAFGVVHRCV-EKATGRVFVAKFINTPYPLDKYTVKNEISIMNQ 104
Query: 390 VGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTA 449
+ HP ++ L + K E +L+ ++ + G L + A + + +
Sbjct: 105 L-HHPKLINLHDAFEDKYEMVLILEFLSGGELFDRI----AAEDYKMSEAEVINYMRQAC 159
Query: 450 RGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCIS--DFGLTPLMN---VPATPSRSAGY 504
G+ H+H H +IK N++ + DFGL +N + + +A +
Sbjct: 160 EGLKHMHEHS---IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEF 216
Query: 505 RAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEW 561
APE+++ +D+++ GVL +L+G +P DD+ L Q+V R +W
Sbjct: 217 AAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAG--EDDLETL----QNVKRCDW 267
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
Query: 450 RGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSA-GYRAPE 508
RG+ +IHS H ++K SN+ +N+D + I DFGL + T + YRAPE
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPE 192
Query: 509 VIETRKHSHKS-DVYSFGVLLLEMLTGKA 536
++ H +++ D++S G ++ E+LTG+
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
Query: 450 RGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSA-GYRAPE 508
RG+ +IHS H ++K SN+ +N+D + I DFGL + T + YRAPE
Sbjct: 141 RGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPE 197
Query: 509 VIETRKHSHKS-DVYSFGVLLLEMLTGKA 536
++ H +++ D++S G ++ E+LTG+
Sbjct: 198 IMLNWMHYNQTVDIWSVGCIMAELLTGRT 226
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
Query: 450 RGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSA-GYRAPE 508
RG+ +IHS H ++K SN+ +N+D + I DFGL + T + YRAPE
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 192
Query: 509 VIETRKHSHKS-DVYSFGVLLLEMLTGKA 536
++ H +++ D++S G ++ E+LTG+
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
Query: 450 RGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSA-GYRAPE 508
RG+ +IHS H ++K SN+ +N+D + I DFGL + T + YRAPE
Sbjct: 138 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 194
Query: 509 VIETRKHSHKS-DVYSFGVLLLEMLTGKA 536
++ H +++ D++S G ++ E+LTG+
Sbjct: 195 IMLNWMHYNQTVDIWSVGCIMAELLTGRT 223
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
Query: 450 RGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSA-GYRAPE 508
RG+ +IHS H ++K SN+ +N+D + I DFGL + T + YRAPE
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 192
Query: 509 VIETRKHSHKS-DVYSFGVLLLEMLTGKA 536
++ H +++ D++S G ++ E+LTG+
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
Query: 450 RGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSA-GYRAPE 508
RG+ +IHS H ++K SN+ +N+D + I DFGL + T + YRAPE
Sbjct: 143 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 199
Query: 509 VIETRKHSHKS-DVYSFGVLLLEMLTGKA 536
++ H +++ D++S G ++ E+LTG+
Sbjct: 200 IMLNWMHYNQTVDIWSVGCIMAELLTGRT 228
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
Query: 450 RGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSA-GYRAPE 508
RG+ +IHS H ++K SN+ +N+D + I DFGL + T + YRAPE
Sbjct: 141 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 197
Query: 509 VIETRKHSHKS-DVYSFGVLLLEMLTGKA 536
++ H +++ D++S G ++ E+LTG+
Sbjct: 198 IMLNWMHYNQTVDIWSVGCIMAELLTGRT 226
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
Query: 450 RGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSA-GYRAPE 508
RG+ +IHS H ++K SN+ +N+D + I DFGL + T + YRAPE
Sbjct: 148 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 204
Query: 509 VIETRKHSHKS-DVYSFGVLLLEMLTGKA 536
++ H +++ D++S G ++ E+LTG+
Sbjct: 205 IMLNWMHYNQTVDIWSVGCIMAELLTGRT 233
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
Query: 450 RGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSA-GYRAPE 508
RG+ +IHS H ++K SN+ +N+D + I DFGL + T + YRAPE
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 192
Query: 509 VIETRKHSHKS-DVYSFGVLLLEMLTGKA 536
++ H +++ D++S G ++ E+LTG+
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
Query: 450 RGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSA-GYRAPE 508
RG+ +IHS H ++K SN+ +N+D + I DFGL + T + YRAPE
Sbjct: 135 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 191
Query: 509 VIETRKHSHKS-DVYSFGVLLLEMLTGKA 536
++ H +++ D++S G ++ E+LTG+
Sbjct: 192 IMLNWMHYNQTVDIWSVGCIMAELLTGRT 220
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
Query: 450 RGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSA-GYRAPE 508
RG+ +IHS H ++K SN+ +N+D + I DFGL + T + YRAPE
Sbjct: 148 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 204
Query: 509 VIETRKHSHKS-DVYSFGVLLLEMLTGKA 536
++ H +++ D++S G ++ E+LTG+
Sbjct: 205 IMLNWMHYNQTVDIWSVGCIMAELLTGRT 233
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
Query: 450 RGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSA-GYRAPE 508
RG+ +IHS H ++K SN+ +N+D + I DFGL + T + YRAPE
Sbjct: 142 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 198
Query: 509 VIETRKHSHKS-DVYSFGVLLLEMLTGKA 536
++ H +++ D++S G ++ E+LTG+
Sbjct: 199 IMLNWMHYNQTVDIWSVGCIMAELLTGRT 227
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
Query: 450 RGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSA-GYRAPE 508
RG+ +IHS H ++K SN+ +N+D + I DFGL + T + YRAPE
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 192
Query: 509 VIETRKHSHKS-DVYSFGVLLLEMLTGKA 536
++ H +++ D++S G ++ E+LTG+
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
Query: 450 RGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSA-GYRAPE 508
RG+ +IHS H ++K SN+ +N+D + I DFGL + T + YRAPE
Sbjct: 147 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 203
Query: 509 VIETRKHSHKS-DVYSFGVLLLEMLTGKA 536
++ H +++ D++S G ++ E+LTG+
Sbjct: 204 IMLNWMHYNQTVDIWSVGCIMAELLTGRT 232
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
Query: 450 RGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSA-GYRAPE 508
RG+ +IHS H ++K SN+ +N+D + I DFGL + T + YRAPE
Sbjct: 148 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 204
Query: 509 VIETRKHSHKS-DVYSFGVLLLEMLTGKA 536
++ H +++ D++S G ++ E+LTG+
Sbjct: 205 IMLNWMHYNQTVDIWSVGCIMAELLTGRT 233
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 92/214 (42%), Gaps = 25/214 (11%)
Query: 345 VLGKGSYGTAYKAVLEES----TTXXXXXXXXXXXXXRDFEQQMEIVGRVGQ--HPNVVP 398
+LGKG +G+ +A L++ D E+ + + + HP+V
Sbjct: 30 MLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAK 89
Query: 399 LRAYYYSKDEK------LLVYDYFASGSLSTLLHGNRGAGRTP--LDWETRVKILLGTAR 450
L K +++ + G L L +R G P L +T V+ ++ A
Sbjct: 90 LVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASR-IGENPFNLPLQTLVRFMVDIAC 148
Query: 451 GVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAGYRAP--- 507
G+ ++ S F H ++ A N ++ +D+ C++DFGL+ + + + P
Sbjct: 149 GMEYLSSRN---FIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKW 205
Query: 508 ---EVIETRKHSHKSDVYSFGVLLLEMLT-GKAP 537
E + ++ SDV++FGV + E++T G+ P
Sbjct: 206 LALESLADNLYTVHSDVWAFGVTMWEIMTRGQTP 239
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
Query: 450 RGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSA-GYRAPE 508
RG+ +IHS H ++K SN+ +N+D + I DFGL + T + YRAPE
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 192
Query: 509 VIETRKHSHKS-DVYSFGVLLLEMLTGKA 536
++ H +++ D++S G ++ E+LTG+
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
Query: 450 RGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSA-GYRAPE 508
RG+ +IHS H ++K SN+ +N+D + I DFGL + T + YRAPE
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 192
Query: 509 VIETRKHSHKS-DVYSFGVLLLEMLTGKA 536
++ H +++ D++S G ++ E+LTG+
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
Query: 450 RGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSA-GYRAPE 508
RG+ +IHS H ++K SN+ +N+D + I DFGL + T + YRAPE
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 192
Query: 509 VIETRKHSHKS-DVYSFGVLLLEMLTGKA 536
++ H +++ D++S G ++ E+LTG+
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 91/218 (41%), Gaps = 22/218 (10%)
Query: 331 YNFDLEDLLRASAEVLGKGSYGTAYKAVLEESTTXXXXXXXXXXX---XXRDFEQQMEIV 387
+ + EDL+ E +G+G++G + L T F Q+ I+
Sbjct: 109 WVLNHEDLV--LGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARIL 166
Query: 388 GRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLG 447
+ HPN+V L K +V + G T L R +T ++++
Sbjct: 167 KQYS-HPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRV----KTLLQMVGD 221
Query: 448 TARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAGYR-- 505
A G+ ++ S H ++ A N L+ + ISDFG++ + S G R
Sbjct: 222 AAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSR-EEADGVXAASGGLRQV 277
Query: 506 -----APEVIETRKHSHKSDVYSFGVLLLEMLT-GKAP 537
APE + ++S +SDV+SFG+LL E + G +P
Sbjct: 278 PVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASP 315
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
Query: 450 RGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSA-GYRAPE 508
RG+ +IHS H ++K SN+ +N+D + I DFGL + T + YRAPE
Sbjct: 138 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 194
Query: 509 VIETRKHSHKS-DVYSFGVLLLEMLTGKA 536
++ H +++ D++S G ++ E+LTG+
Sbjct: 195 IMLNWMHYNQTVDIWSVGCIMAELLTGRT 223
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 74/157 (47%), Gaps = 14/157 (8%)
Query: 387 VGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILL 446
+ +V HPN+V L ++ LV +Y + G + L + GR + E R K
Sbjct: 66 IMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH---GRMK-EKEARAK-FR 120
Query: 447 GTARGVAHIHSMGGPKF-THGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG-- 503
V + H KF H ++KA N+L++ D++ I+DFG + G
Sbjct: 121 QIVSAVQYCHQ----KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFCGAP 176
Query: 504 -YRAPEVIETRKHSH-KSDVYSFGVLLLEMLTGKAPL 538
Y APE+ + +K+ + DV+S GV+L +++G P
Sbjct: 177 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
Query: 450 RGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSA-GYRAPE 508
RG+ +IHS H ++K SN+ +N+D + I DFGL + T + YRAPE
Sbjct: 138 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 194
Query: 509 VIETRKHSHKS-DVYSFGVLLLEMLTGKA 536
++ H +++ D++S G ++ E+LTG+
Sbjct: 195 IMLNWMHYNQTVDIWSVGCIMAELLTGRT 223
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 100/231 (43%), Gaps = 31/231 (13%)
Query: 330 SYNFDLEDLLRASAEVLGKGSYG---TAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEI 386
S++ ED+ + +VLG+G++ T + + R F +++E+
Sbjct: 5 SFSGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVF-REVEM 63
Query: 387 VGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILL 446
+ + H NV+ L ++ +D LV++ GS+ + +H R + E V ++
Sbjct: 64 LYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFN----ELEASV-VVQ 118
Query: 447 GTARGVAHIHSMGGPKFTHGNIKASNVLI---NQDLDGCISDFGLTPLMNVPA------- 496
A + +H+ G H ++K N+L NQ I DFGL + +
Sbjct: 119 DVASALDFLHNKG---IAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPIST 175
Query: 497 ----TPSRSAGYRAPEVIETRK-----HSHKSDVYSFGVLLLEMLTGKAPL 538
TP SA Y APEV+E + + D++S GV+L +L+G P
Sbjct: 176 PELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPF 226
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
Query: 450 RGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSA-GYRAPE 508
RG+ +IHS H ++K SN+ +N+D + I DFGL + T + YRAPE
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 192
Query: 509 VIETRKHSHKS-DVYSFGVLLLEMLTGKA 536
++ H +++ D++S G ++ E+LTG+
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
Query: 450 RGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSA-GYRAPE 508
RG+ +IHS H ++K SN+ +N+D + I DFGL + T + YRAPE
Sbjct: 141 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 197
Query: 509 VIETRKHSHKS-DVYSFGVLLLEMLTGKA 536
++ H +++ D++S G ++ E+LTG+
Sbjct: 198 IMLNWMHYNQTVDIWSVGCIMAELLTGRT 226
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 101/234 (43%), Gaps = 43/234 (18%)
Query: 339 LRASAEVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFE-QQMEIVGRVGQHPNVV 397
L S ++LG GS GT V + S D +++++ HPNV+
Sbjct: 16 LVVSEKILGYGSSGTV---VFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVI 72
Query: 398 PLRAYYYSK--DEKLLVYDYFASGSLSTLLHG-NRGAGRTPLDWETR-VKILLGTARGVA 453
YY S+ D L + + +L L+ N L E + +L A GVA
Sbjct: 73 ---RYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVA 129
Query: 454 HIHSMGGPKFTHGNIKASNVLIN-------------QDLDGCISDFGLTPLMNVPAT--- 497
H+HS+ K H ++K N+L++ ++L ISDFGL ++ +
Sbjct: 130 HLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFR 186
Query: 498 -----PSRSAGYRAPEVIE-------TRKHSHKSDVYSFGVLLLEMLT-GKAPL 538
PS ++G+RAPE++E R+ + D++S G + +L+ GK P
Sbjct: 187 TNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPF 240
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
Query: 450 RGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSA-GYRAPE 508
RG+ +IHS H ++K SN+ +N+D + I DFGL + T + YRAPE
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 192
Query: 509 VIETRKHSHKS-DVYSFGVLLLEMLTGKA 536
++ H +++ D++S G ++ E+LTG+
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
Query: 450 RGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSA-GYRAPE 508
RG+ +IHS H ++K SN+ +N+D + I DFGL + T + YRAPE
Sbjct: 133 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 189
Query: 509 VIETRKHSHKS-DVYSFGVLLLEMLTGKA 536
++ H +++ D++S G ++ E+LTG+
Sbjct: 190 IMLNWMHYNQTVDIWSVGCIMAELLTGRT 218
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
Query: 450 RGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSA-GYRAPE 508
RG+ +IHS H ++K SN+ +N+D + I DFGL + T + YRAPE
Sbjct: 132 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 188
Query: 509 VIETRKHSHKS-DVYSFGVLLLEMLTGKA 536
++ H +++ D++S G ++ E+LTG+
Sbjct: 189 IMLNWMHYNQTVDIWSVGCIMAELLTGRT 217
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
Query: 450 RGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSA-GYRAPE 508
RG+ +IHS H ++K SN+ +N+D + I DFGL + T + YRAPE
Sbjct: 159 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 215
Query: 509 VIETRKHSHKS-DVYSFGVLLLEMLTGKA 536
++ H +++ D++S G ++ E+LTG+
Sbjct: 216 IMLNWMHYNQTVDIWSVGCIMAELLTGRT 244
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 51/88 (57%), Gaps = 5/88 (5%)
Query: 450 RGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSA-GYRAPE 508
RG+ +IHS H ++K SN+ +N+D + I DFGL + T + YRAPE
Sbjct: 146 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 202
Query: 509 VIETRKHSHKS-DVYSFGVLLLEMLTGK 535
++ H +++ D++S G ++ E+LTG+
Sbjct: 203 IMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
Query: 450 RGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSA-GYRAPE 508
RG+ +IHS H ++K SN+ +N+D + I DFGL + T + YRAPE
Sbjct: 133 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 189
Query: 509 VIETRKHSHKS-DVYSFGVLLLEMLTGKA 536
++ H +++ D++S G ++ E+LTG+
Sbjct: 190 IMLNWMHYNQTVDIWSVGCIMAELLTGRT 218
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
Query: 450 RGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSA-GYRAPE 508
RG+ +IHS H ++K SN+ +N+D + I DFGL + T + YRAPE
Sbjct: 134 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 190
Query: 509 VIETRKHSHKS-DVYSFGVLLLEMLTGKA 536
++ H +++ D++S G ++ E+LTG+
Sbjct: 191 IMLNWMHYNQTVDIWSVGCIMAELLTGRT 219
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
Query: 450 RGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSA-GYRAPE 508
RG+ +IHS H ++K SN+ +N+D + I DFGL + T + YRAPE
Sbjct: 156 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 212
Query: 509 VIETRKHSHKS-DVYSFGVLLLEMLTGKA 536
++ H +++ D++S G ++ E+LTG+
Sbjct: 213 IMLNWMHYNQTVDIWSVGCIMAELLTGRT 241
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
Query: 450 RGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSA-GYRAPE 508
RG+ +IHS H ++K SN+ +N+D + I DFGL + T + YRAPE
Sbjct: 155 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 211
Query: 509 VIETRKHSHKS-DVYSFGVLLLEMLTGKA 536
++ H +++ D++S G ++ E+LTG+
Sbjct: 212 IMLNWMHYNQTVDIWSVGCIMAELLTGRT 240
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 54/99 (54%), Gaps = 6/99 (6%)
Query: 448 TARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR------S 501
TA V+ + + G H ++K N+L+N+D+ I+DFG +++ + +R +
Sbjct: 114 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 173
Query: 502 AGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQS 540
A Y +PE++ + SD+++ G ++ +++ G P ++
Sbjct: 174 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 212
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 75/166 (45%), Gaps = 11/166 (6%)
Query: 378 RDFEQQMEIVGRVGQHPNVVPLRAYYYS--KDEKLLVYDYFASGSLSTLLHGNRGAGRTP 435
RDF ++ + R+ HPNV+P+ S L+ + GSL +LH G
Sbjct: 52 RDFNEECPRL-RIFSHPNVLPVLGACQSPPAPHPTLITHWXPYGSLYNVLH--EGTNFV- 107
Query: 436 LDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP 495
+D VK L ARG A +H++ P + + +V I++D IS + P
Sbjct: 108 VDQSQAVKFALDXARGXAFLHTLE-PLIPRHALNSRSVXIDEDXTARISXADVKFSFQSP 166
Query: 496 ATPSRSAGYRAPEVIETR---KHSHKSDVYSFGVLLLEMLTGKAPL 538
+ + APE ++ + + +D +SF VLL E++T + P
Sbjct: 167 GR-XYAPAWVAPEALQKKPEDTNRRSADXWSFAVLLWELVTREVPF 211
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 75/163 (46%), Gaps = 26/163 (15%)
Query: 387 VGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLL--HGNRGAGRTPLDW----ET 440
+ +V HPN+V L ++ LV +Y + G + L HG W E
Sbjct: 59 IMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG----------WMKEKEA 108
Query: 441 RVKILLGTARGVAHIHSMGGPKF-THGNIKASNVLINQDLDGCISDFGLT---PLMNVPA 496
R K V + H KF H ++KA N+L++ D++ I+DFG + N
Sbjct: 109 RAK-FRQIVSAVQYCHQ----KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLD 163
Query: 497 TPSRSAGYRAPEVIETRKHSH-KSDVYSFGVLLLEMLTGKAPL 538
T S Y APE+ + +K+ + DV+S GV+L +++G P
Sbjct: 164 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 206
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 98/251 (39%), Gaps = 29/251 (11%)
Query: 383 QMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAG--------RT 434
+++I+ +GQH N+V L L++ +Y G L L R G
Sbjct: 99 ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHN 158
Query: 435 PLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLT-PLMN 493
P + + +L +++ + + H ++ A NVL+ I DFGL +MN
Sbjct: 159 PEEQLSSRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMN 218
Query: 494 -----VPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVD 548
V + APE I ++ +SDV+S+G+LL E+ + +
Sbjct: 219 DSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS-------------LG 265
Query: 549 LPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMI 608
L + +V ++ V D M + + I AC A P RP ++ +
Sbjct: 266 LNPYPGILVNSKFYKLVKDGYQMAQPAFAPK--NIYSIMQACWALEPTHRPTFQQICSFL 323
Query: 609 EEVRQSDSENR 619
+E Q D R
Sbjct: 324 QEQAQEDRRER 334
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 51/88 (57%), Gaps = 5/88 (5%)
Query: 450 RGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSA-GYRAPE 508
RG+ +IHS H ++K SN+ +N+D + I DFGL + T + YRAPE
Sbjct: 132 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 188
Query: 509 VIETRKHSHKS-DVYSFGVLLLEMLTGK 535
++ H +++ D++S G ++ E+LTG+
Sbjct: 189 IMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 54/99 (54%), Gaps = 6/99 (6%)
Query: 448 TARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR------S 501
TA V+ + + G H ++K N+L+N+D+ I+DFG +++ + +R +
Sbjct: 113 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 172
Query: 502 AGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQS 540
A Y +PE++ + SD+++ G ++ +++ G P ++
Sbjct: 173 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 211
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 54/99 (54%), Gaps = 6/99 (6%)
Query: 448 TARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR------S 501
TA V+ + + G H ++K N+L+N+D+ I+DFG +++ + +R +
Sbjct: 115 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 174
Query: 502 AGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQS 540
A Y +PE++ + SD+++ G ++ +++ G P ++
Sbjct: 175 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 213
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 54/99 (54%), Gaps = 6/99 (6%)
Query: 448 TARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR------S 501
TA V+ + + G H ++K N+L+N+D+ I+DFG +++ + +R +
Sbjct: 116 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 175
Query: 502 AGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQS 540
A Y +PE++ + SD+++ G ++ +++ G P ++
Sbjct: 176 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 214
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
Query: 450 RGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSA-GYRAPE 508
RG+ +IHS H ++K SN+ +N+D + I DFGL + T + YRAPE
Sbjct: 155 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 211
Query: 509 VIETRKHSHKS-DVYSFGVLLLEMLTGKA 536
++ H +++ D++S G ++ E+LTG+
Sbjct: 212 IMLNWMHYNQTVDIWSVGCIMAELLTGRT 240
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 51/88 (57%), Gaps = 5/88 (5%)
Query: 450 RGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSA-GYRAPE 508
RG+ +IHS H ++K SN+ +N+D + I DFGL + T + YRAPE
Sbjct: 132 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 188
Query: 509 VIETRKHSHKS-DVYSFGVLLLEMLTGK 535
++ H +++ D++S G ++ E+LTG+
Sbjct: 189 IMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
Query: 450 RGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSA-GYRAPE 508
RG+ +IHS H ++K SN+ +N+D + I DFGL + T + YRAPE
Sbjct: 156 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 212
Query: 509 VIETRKHSHKS-DVYSFGVLLLEMLTGKA 536
++ H +++ D++S G ++ E+LTG+
Sbjct: 213 IMLNWMHYNQTVDIWSVGCIMAELLTGRT 241
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 90/228 (39%), Gaps = 30/228 (13%)
Query: 345 VLGKGSYGTAYKA----VLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLR 400
+LGKGS+G K +E +++E++ ++ HPN++ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL-DHPNIMKLF 87
Query: 401 AYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGG 460
+V + + G L + R +I+ G+ ++H
Sbjct: 88 EILEDSSSFYIVGELYTGGELF-----DEIIKRKRFSEHDAARIIKQVFSGITYMHKHN- 141
Query: 461 PKFTHGNIKASNVLIN---QDLDGCISDFGL-TPLMNVPATPSR--SAGYRAPEVIETRK 514
H ++K N+L+ +D D I DFGL T R +A Y APEV+
Sbjct: 142 --IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG-T 198
Query: 515 HSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMV----------DLPRW 552
+ K DV+S GV+L +L+G P D++ DLP+W
Sbjct: 199 YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQW 246
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
Query: 450 RGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSA-GYRAPE 508
RG+ +IHS H ++K SN+ +N+D + I DFGL + T + YRAPE
Sbjct: 142 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 198
Query: 509 VIETRKHSHKS-DVYSFGVLLLEMLTGKA 536
++ H +++ D++S G ++ E+LTG+
Sbjct: 199 IMLNWMHYNQTVDIWSVGCIMAELLTGRT 227
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 89/212 (41%), Gaps = 16/212 (7%)
Query: 344 EVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRD--FEQQMEIVGRVGQHPNVVPLRA 401
EVLG G++ + + RD E ++ ++ ++ +H N+V L
Sbjct: 15 EVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKI-KHENIVTLED 73
Query: 402 YYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGP 461
Y S LV + G L + RG T D ++ +L V ++H G
Sbjct: 74 IYESTTHYYLVMQLVSGGELFDRI-LERGV-YTEKDASLVIQQVLS---AVKYLHENG-- 126
Query: 462 KFTHGNIKASNVLI---NQDLDGCISDFGLTPLMN--VPATPSRSAGYRAPEVIETRKHS 516
H ++K N+L ++ I+DFGL+ + + +T + GY APEV+ + +S
Sbjct: 127 -IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTACGTPGYVAPEVLAQKPYS 185
Query: 517 HKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVD 548
D +S GV+ +L G P T + +
Sbjct: 186 KAVDCWSIGVITYILLCGYPPFYEETESKLFE 217
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 54/99 (54%), Gaps = 6/99 (6%)
Query: 448 TARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR------S 501
TA V+ + + G H ++K N+L+N+D+ I+DFG +++ + +R +
Sbjct: 120 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 179
Query: 502 AGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQS 540
A Y +PE++ + SD+++ G ++ +++ G P ++
Sbjct: 180 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 218
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 55/121 (45%), Gaps = 24/121 (19%)
Query: 432 GRTPLDWETR---VKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGL 488
GR ++ R + I L A V +HS G H ++K SN+ D + DFGL
Sbjct: 108 GRCTIEERERSVCLHIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGL 164
Query: 489 TPLMN-----------VPATPSRSAG------YRAPEVIETRKHSHKSDVYSFGVLLLEM 531
M+ +PA +R G Y +PE I +SHK D++S G++L E+
Sbjct: 165 VTAMDQDEEEQTVLTPMPAY-ARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFEL 223
Query: 532 L 532
L
Sbjct: 224 L 224
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 77/168 (45%), Gaps = 23/168 (13%)
Query: 385 EIVG-RVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVK 443
EI+ R +HPN+V + + +V +Y + G L + AGR D E R
Sbjct: 65 EIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERIC---NAGRFSED-EARF- 119
Query: 444 ILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGC------ISDFGLTPLMNVPAT 497
GV++ H+M + H ++K N L LDG I DFG + + +
Sbjct: 120 FFQQLISGVSYCHAM---QVCHRDLKLENTL----LDGSPAPRLKICDFGYSKSSVLHSQ 172
Query: 498 PSRSAG---YRAPEVIETRKHSHK-SDVYSFGVLLLEMLTGKAPLQSP 541
P + G Y APEV+ +++ K +DV+S GV L ML G P + P
Sbjct: 173 PKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDP 220
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 51/94 (54%), Gaps = 15/94 (15%)
Query: 450 RGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG------ 503
RG+ +IHS H ++K SN+ +N+D + I DFGL T AG
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMAGFVATRW 187
Query: 504 YRAPEVIETRKHSHKS-DVYSFGVLLLEMLTGKA 536
YRAPE++ H +++ D++S G ++ E+LTG+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 15/93 (16%)
Query: 450 RGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG------ 503
RG+ +IHS H ++K SN+ +N+D + I DFGL T AG
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMAGFVATRW 187
Query: 504 YRAPEVIETRKHSHKS-DVYSFGVLLLEMLTGK 535
YRAPE++ H +++ D++S G ++ E+LTG+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 54/99 (54%), Gaps = 6/99 (6%)
Query: 448 TARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR------S 501
TA V+ + + G H ++K N+L+N+D+ I+DFG +++ + +R +
Sbjct: 135 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 194
Query: 502 AGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQS 540
A Y +PE++ + SD+++ G ++ +++ G P ++
Sbjct: 195 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 233
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 90/228 (39%), Gaps = 29/228 (12%)
Query: 345 VLGKGSYGTAY--KAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQ--HPNVVPLR 400
VLGKGS+G K + D E + V + Q HPN++ L
Sbjct: 39 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 98
Query: 401 AYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGG 460
++ K LV + + G L + R +I+ G+ ++H
Sbjct: 99 EFFEDKGYFYLVGEVYTGGELF-----DEIISRKRFSEVDAARIIRQVLSGITYMHK--- 150
Query: 461 PKFTHGNIKASNVLI---NQDLDGCISDFGLTPLMNVPATPSRSAG---YRAPEVIETRK 514
K H ++K N+L+ ++D + I DFGL+ G Y APEV+
Sbjct: 151 NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHG-T 209
Query: 515 HSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMV----------DLPRW 552
+ K DV+S GV+L +L+G P D++ +LP+W
Sbjct: 210 YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQW 257
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 54/99 (54%), Gaps = 6/99 (6%)
Query: 448 TARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR------S 501
TA V+ + + G H ++K N+L+N+D+ I+DFG +++ + +R +
Sbjct: 135 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 194
Query: 502 AGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQS 540
A Y +PE++ + SD+++ G ++ +++ G P ++
Sbjct: 195 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 233
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
Query: 450 RGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSA-GYRAPE 508
RG+ +IHS H ++K SN+ +N+D + I DFGL + T + YRAPE
Sbjct: 138 RGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATRWYRAPE 194
Query: 509 VIETRKHSHKS-DVYSFGVLLLEMLTGKA 536
++ H +++ D++S G ++ E+LTG+
Sbjct: 195 IMLNWMHYNQTVDIWSVGCIMAELLTGRT 223
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 100/234 (42%), Gaps = 43/234 (18%)
Query: 339 LRASAEVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFE-QQMEIVGRVGQHPNVV 397
L S ++LG GS GT V + S D +++++ HPNV+
Sbjct: 16 LVVSEKILGYGSSGTV---VFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVI 72
Query: 398 PLRAYYYSK--DEKLLVYDYFASGSLSTLLHG-NRGAGRTPLDWETR-VKILLGTARGVA 453
YY S+ D L + + +L L+ N L E + +L A GVA
Sbjct: 73 ---RYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVA 129
Query: 454 HIHSMGGPKFTHGNIKASNVLIN-------------QDLDGCISDFGLTPLMNVPA---- 496
H+HS+ K H ++K N+L++ ++L ISDFGL ++
Sbjct: 130 HLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFR 186
Query: 497 ----TPSRSAGYRAPEVIE-------TRKHSHKSDVYSFGVLLLEMLT-GKAPL 538
PS ++G+RAPE++E R+ + D++S G + +L+ GK P
Sbjct: 187 XNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPF 240
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 51/88 (57%), Gaps = 5/88 (5%)
Query: 450 RGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSA-GYRAPE 508
RG+ +IHS H ++K SN+ +N+D + I DFGL + T + YRAPE
Sbjct: 142 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 198
Query: 509 VIETRKHSHKS-DVYSFGVLLLEMLTGK 535
++ H +++ D++S G ++ E+LTG+
Sbjct: 199 IMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 91/218 (41%), Gaps = 22/218 (10%)
Query: 331 YNFDLEDLLRASAEVLGKGSYGTAYKAVLEESTTXXXXXXXXXXX---XXRDFEQQMEIV 387
+ + EDL+ E +G+G++G + L T F Q+ I+
Sbjct: 109 WVLNHEDLV--LGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARIL 166
Query: 388 GRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLG 447
+ HPN+V L K +V + G T L R +T ++++
Sbjct: 167 KQYS-HPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRV----KTLLQMVGD 221
Query: 448 TARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAGYR-- 505
A G+ ++ S H ++ A N L+ + ISDFG++ + S G R
Sbjct: 222 AAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSR-EEADGVYAASGGLRQV 277
Query: 506 -----APEVIETRKHSHKSDVYSFGVLLLEMLT-GKAP 537
APE + ++S +SDV+SFG+LL E + G +P
Sbjct: 278 PVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASP 315
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 90/228 (39%), Gaps = 30/228 (13%)
Query: 345 VLGKGSYGTAYKA----VLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLR 400
+LGKGS+G K +E +++E++ ++ HPN++ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL-DHPNIMKLF 87
Query: 401 AYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGG 460
+V + + G L + R +I+ G+ ++H
Sbjct: 88 EILEDSSSFYIVGELYTGGELF-----DEIIKRKRFSEHDAARIIKQVFSGITYMHKHN- 141
Query: 461 PKFTHGNIKASNVLIN---QDLDGCISDFGL-TPLMNVPATPSR--SAGYRAPEVIETRK 514
H ++K N+L+ +D D I DFGL T R +A Y APEV+
Sbjct: 142 --IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG-T 198
Query: 515 HSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMV----------DLPRW 552
+ K DV+S GV+L +L+G P D++ DLP+W
Sbjct: 199 YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQW 246
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
Query: 450 RGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSA-GYRAPE 508
RG+ +IHS H ++K SN+ +N+D + I DFGL + T + YRAPE
Sbjct: 142 RGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATRWYRAPE 198
Query: 509 VIETRKHSHKS-DVYSFGVLLLEMLTGKA 536
++ H +++ D++S G ++ E+LTG+
Sbjct: 199 IMLNWMHYNQTVDIWSVGCIMAELLTGRT 227
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 90/228 (39%), Gaps = 30/228 (13%)
Query: 345 VLGKGSYGTAYKA----VLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLR 400
+LGKGS+G K +E +++E++ ++ HPN++ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL-DHPNIMKLF 87
Query: 401 AYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGG 460
+V + + G L + R +I+ G+ ++H
Sbjct: 88 EILEDSSSFYIVGELYTGGELF-----DEIIKRKRFSEHDAARIIKQVFSGITYMHKHN- 141
Query: 461 PKFTHGNIKASNVLIN---QDLDGCISDFGL-TPLMNVPATPSR--SAGYRAPEVIETRK 514
H ++K N+L+ +D D I DFGL T R +A Y APEV+
Sbjct: 142 --IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG-T 198
Query: 515 HSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMV----------DLPRW 552
+ K DV+S GV+L +L+G P D++ DLP+W
Sbjct: 199 YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQW 246
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 54/99 (54%), Gaps = 6/99 (6%)
Query: 448 TARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR------S 501
TA V+ + + G H ++K N+L+N+D+ I+DFG +++ + +R +
Sbjct: 138 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 502 AGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQS 540
A Y +PE++ + SD+++ G ++ +++ G P ++
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 236
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 54/99 (54%), Gaps = 6/99 (6%)
Query: 448 TARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR------S 501
TA V+ + + G H ++K N+L+N+D+ I+DFG +++ + +R +
Sbjct: 143 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 202
Query: 502 AGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQS 540
A Y +PE++ + SD+++ G ++ +++ G P ++
Sbjct: 203 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 241
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 88/211 (41%), Gaps = 35/211 (16%)
Query: 346 LGKGSYGTAYKAVLEESTTXXX----XXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRA 401
+G+GS+ T YK + E+T + F+++ E + + QHPN+V
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGL-QHPNIVRFYD 92
Query: 402 YYYS--KDEK--LLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTAR----GVA 453
+ S K +K +LV + SG+L T L + ++K+L R G+
Sbjct: 93 SWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVX---------KIKVLRSWCRQILKGLQ 143
Query: 454 HIHSMGGPKFTHGNIKASNVLINQDLDGC-ISDFGLTPLMN------VPATPSRSAGYRA 506
+H+ P H ++K N+ I I D GL L V TP + A
Sbjct: 144 FLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPE----FXA 198
Query: 507 PEVIETRKHSHKSDVYSFGVLLLEMLTGKAP 537
PE E K+ DVY+FG LE T + P
Sbjct: 199 PEXYE-EKYDESVDVYAFGXCXLEXATSEYP 228
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 15/93 (16%)
Query: 450 RGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG------ 503
RG+ +IHS H ++K SN+ +N+D + I DFGL T AG
Sbjct: 132 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMAGFVATRW 183
Query: 504 YRAPEVIETRKHSHKS-DVYSFGVLLLEMLTGK 535
YRAPE++ H +++ D++S G ++ E+LTG+
Sbjct: 184 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 78/210 (37%), Gaps = 28/210 (13%)
Query: 344 EVLGKGSYGTAYKAVL----EESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPL 399
E LGKG++ + V +E + E++ I R+ +HPN+V L
Sbjct: 17 EELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARIC-RLLKHPNIVRL 75
Query: 400 RAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMG 459
+ L++D G L + R + V H H MG
Sbjct: 76 HDSISEEGHHYLIFDLVTGGELFEDI-----VAREYYSEADASHCIQQILEAVLHCHQMG 130
Query: 460 GPKFTHGNIKASNVLINQDLDGC---ISDFGLT--------PLMNVPATPSRSAGYRAPE 508
H N+K N+L+ L G ++DFGL TP GY +PE
Sbjct: 131 ---VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTP----GYLSPE 183
Query: 509 VIETRKHSHKSDVYSFGVLLLEMLTGKAPL 538
V+ + D+++ GV+L +L G P
Sbjct: 184 VLRKDPYGKPVDLWACGVILYILLVGYPPF 213
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 54/99 (54%), Gaps = 6/99 (6%)
Query: 448 TARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR------S 501
TA V+ + + G H ++K N+L+N+D+ I+DFG +++ + +R +
Sbjct: 138 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 502 AGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQS 540
A Y +PE++ + SD+++ G ++ +++ G P ++
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 236
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 54/99 (54%), Gaps = 6/99 (6%)
Query: 448 TARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR------S 501
TA V+ + + G H ++K N+L+N+D+ I+DFG +++ + +R +
Sbjct: 136 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGT 195
Query: 502 AGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQS 540
A Y +PE++ + SD+++ G ++ +++ G P ++
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 234
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 15/163 (9%)
Query: 393 HPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGV 452
H +V L + ++ +Y A+G L L R +T + LL + V
Sbjct: 62 HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT--------QQLLEMCKDV 113
Query: 453 AH-IHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTP-LMNVPATPSRSAG----YRA 506
+ + +F H ++ A N L+N +SDFGL+ +++ T S + +
Sbjct: 114 CEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSP 173
Query: 507 PEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVD 548
PEV+ K S KSD+++FGVL+ E+ + GK P + T + +
Sbjct: 174 PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAE 216
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 54/99 (54%), Gaps = 6/99 (6%)
Query: 448 TARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR------S 501
TA V+ + + G H ++K N+L+N+D+ I+DFG +++ + +R +
Sbjct: 136 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 502 AGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQS 540
A Y +PE++ + SD+++ G ++ +++ G P ++
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 234
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 54/99 (54%), Gaps = 6/99 (6%)
Query: 448 TARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR------S 501
TA V+ + + G H ++K N+L+N+D+ I+DFG +++ + +R +
Sbjct: 136 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 502 AGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQS 540
A Y +PE++ + SD+++ G ++ +++ G P ++
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 234
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 54/99 (54%), Gaps = 6/99 (6%)
Query: 448 TARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR------S 501
TA V+ + + G H ++K N+L+N+D+ I+DFG +++ + +R +
Sbjct: 138 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 502 AGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQS 540
A Y +PE++ + SD+++ G ++ +++ G P ++
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 236
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 54/99 (54%), Gaps = 6/99 (6%)
Query: 448 TARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR------S 501
TA V+ + + G H ++K N+L+N+D+ I+DFG +++ + +R +
Sbjct: 139 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 198
Query: 502 AGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQS 540
A Y +PE++ + SD+++ G ++ +++ G P ++
Sbjct: 199 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 237
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 54/99 (54%), Gaps = 6/99 (6%)
Query: 448 TARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR------S 501
TA V+ + + G H ++K N+L+N+D+ I+DFG +++ + +R +
Sbjct: 139 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 198
Query: 502 AGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQS 540
A Y +PE++ + SD+++ G ++ +++ G P ++
Sbjct: 199 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 237
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 54/99 (54%), Gaps = 6/99 (6%)
Query: 448 TARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR------S 501
TA V+ + + G H ++K N+L+N+D+ I+DFG +++ + +R +
Sbjct: 136 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 502 AGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQS 540
A Y +PE++ + SD+++ G ++ +++ G P ++
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 234
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 90/228 (39%), Gaps = 29/228 (12%)
Query: 345 VLGKGSYGTAY--KAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQ--HPNVVPLR 400
VLGKGS+G K + D E + V + Q HPN++ L
Sbjct: 33 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 92
Query: 401 AYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGG 460
++ K LV + + G L + R +I+ G+ ++H
Sbjct: 93 EFFEDKGYFYLVGEVYTGGELF-----DEIISRKRFSEVDAARIIRQVLSGITYMHK--- 144
Query: 461 PKFTHGNIKASNVLI---NQDLDGCISDFGLTPLMNVPATPSRSAG---YRAPEVIETRK 514
K H ++K N+L+ ++D + I DFGL+ G Y APEV+
Sbjct: 145 NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHG-T 203
Query: 515 HSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMV----------DLPRW 552
+ K DV+S GV+L +L+G P D++ +LP+W
Sbjct: 204 YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQW 251
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 15/163 (9%)
Query: 393 HPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGV 452
H +V L + ++ +Y A+G L L R +T + LL + V
Sbjct: 58 HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT--------QQLLEMCKDV 109
Query: 453 AH-IHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTP-LMNVPATPSRSAGY----RA 506
+ + +F H ++ A N L+N +SDFGL+ +++ T S + +
Sbjct: 110 CEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSP 169
Query: 507 PEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVD 548
PEV+ K S KSD+++FGVL+ E+ + GK P + T + +
Sbjct: 170 PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAE 212
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 91/207 (43%), Gaps = 30/207 (14%)
Query: 344 EVLGKGSYGTAYKAVL----EESTTXXXXXXXXXXXXXRDFEQQMEIVGRVG--QHPNVV 397
+VLG G +GT +K V E + F+ + + +G H ++V
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 96
Query: 398 PLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGA--GRTPLDWETRVKILLGTARGVAHI 455
L +L V Y GSL + +RGA + L+W ++ A+G+ ++
Sbjct: 97 RLLGLCPGSSLQL-VTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQI------AKGMYYL 149
Query: 456 HSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM---------NVPATPSRSAGYRA 506
G H N+ A NVL+ ++DFG+ L+ + TP + + A
Sbjct: 150 EEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIK---WMA 203
Query: 507 PEVIETRKHSHKSDVYSFGVLLLEMLT 533
E I K++H+SDV+S+GV + E++T
Sbjct: 204 LESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 94/228 (41%), Gaps = 18/228 (7%)
Query: 344 EVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQM--EI-VGRVGQHPNVVPLR 400
E +G+G+YGT +KA E+ EI + + +H N+V L
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLH 67
Query: 401 AYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGG 460
+S + LV++ F L G LD E L +G+ HS
Sbjct: 68 DVLHSDKKLTLVFE-FCDQDLKKYFDSCNGD----LDPEIVKSFLFQLLKGLGFCHSRN- 121
Query: 461 PKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP----ATPSRSAGYRAPEVIETRK-H 515
H ++K N+LIN++ + ++DFGL +P + + YR P+V+ K +
Sbjct: 122 --VLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLY 179
Query: 516 SHKSDVYSFGVLLLEMLTGKAPL--QSPTRDDMVDLPRWVQSVVREEW 561
S D++S G + E+ PL + D + + R + + E+W
Sbjct: 180 STSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQW 227
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 54/99 (54%), Gaps = 6/99 (6%)
Query: 448 TARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR------S 501
TA V+ + + G H ++K N+L+N+D+ I+DFG +++ + +R +
Sbjct: 138 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 502 AGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQS 540
A Y +PE++ + SD+++ G ++ +++ G P ++
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 236
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 54/99 (54%), Gaps = 6/99 (6%)
Query: 448 TARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR------S 501
TA V+ + + G H ++K N+L+N+D+ I+DFG +++ + +R +
Sbjct: 138 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 502 AGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQS 540
A Y +PE++ + SD+++ G ++ +++ G P ++
Sbjct: 198 AQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPPFRA 236
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 87/206 (42%), Gaps = 21/206 (10%)
Query: 345 VLGKGSYGTAY--KAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAY 402
VLGKG+YG Y + + + + +++ + + +H N+V
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHL-KHKNIVQYLGS 87
Query: 403 YYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPL-DWETRVKILLGTA-RGVAHIHSMGG 460
+ + + GSLS LL G PL D E + G+ ++H
Sbjct: 88 FSENGFIKIFMEQVPGGSLSALLRSKWG----PLKDNEQTIGFYTKQILEGLKYLHD--- 140
Query: 461 PKFTHGNIKASNVLINQDLDGC--ISDFG----LTPLMNVPATPSRSAGYRAPEVIET-- 512
+ H +IK NVLIN G ISDFG L + T + + Y APE+I+
Sbjct: 141 NQIVHRDIKGDNVLINT-YSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGP 199
Query: 513 RKHSHKSDVYSFGVLLLEMLTGKAPL 538
R + +D++S G ++EM TGK P
Sbjct: 200 RGYGKAADIWSLGCTIIEMATGKPPF 225
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 54/99 (54%), Gaps = 6/99 (6%)
Query: 448 TARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR------S 501
TA V+ + + G H ++K N+L+N+D+ I+DFG +++ + +R +
Sbjct: 141 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 200
Query: 502 AGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQS 540
A Y +PE++ + SD+++ G ++ +++ G P ++
Sbjct: 201 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 239
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 50/88 (56%), Gaps = 5/88 (5%)
Query: 450 RGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSA-GYRAPE 508
RG+ +IHS H ++K SN+ +N+D + I DFGL T + YRAPE
Sbjct: 143 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPE 199
Query: 509 VIETRKHSHKS-DVYSFGVLLLEMLTGK 535
++ H +++ D++S G ++ E+LTG+
Sbjct: 200 IMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 50/88 (56%), Gaps = 5/88 (5%)
Query: 450 RGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSA-GYRAPE 508
RG+ +IHS H ++K SN+ +N+D + I DFGL T + YRAPE
Sbjct: 143 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPE 199
Query: 509 VIETRKHSHKS-DVYSFGVLLLEMLTGK 535
++ H +++ D++S G ++ E+LTG+
Sbjct: 200 IMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 74/164 (45%), Gaps = 17/164 (10%)
Query: 393 HPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGV 452
H +V L + ++ +Y A+G L L R +T + LL + V
Sbjct: 78 HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT--------QQLLEMCKDV 129
Query: 453 AH-IHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG------YR 505
+ + +F H ++ A N L+N +SDFGL+ + + + S G +
Sbjct: 130 CEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV-LDDEETSSVGSKFPVRWS 188
Query: 506 APEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVD 548
PEV+ K S KSD+++FGVL+ E+ + GK P + T + +
Sbjct: 189 PPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAE 232
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
Query: 450 RGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSA-GYRAPE 508
RG+ +IHS H ++K SN+ +N+D + I DFGL + T + YRAPE
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYVATRWYRAPE 192
Query: 509 VIETRKHSHKS-DVYSFGVLLLEMLTGKA 536
++ H +++ D++S G ++ E+LTG+
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
Query: 450 RGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSA-GYRAPE 508
RG+ +IHS H ++K SN+ +N+D + I D+GL + T + YRAPE
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYVATRWYRAPE 192
Query: 509 VIETRKHSHKS-DVYSFGVLLLEMLTGKA 536
++ H +++ D++S G ++ E+LTG+
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 15/163 (9%)
Query: 393 HPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGV 452
H +V L + ++ +Y A+G L L R +T + LL + V
Sbjct: 63 HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT--------QQLLEMCKDV 114
Query: 453 AH-IHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTP-LMNVPATPSRSAG----YRA 506
+ + +F H ++ A N L+N +SDFGL+ +++ T S + +
Sbjct: 115 CEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSP 174
Query: 507 PEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVD 548
PEV+ K S KSD+++FGVL+ E+ + GK P + T + +
Sbjct: 175 PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAE 217
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 90/203 (44%), Gaps = 17/203 (8%)
Query: 344 EVLGKGSYG---TAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLR 400
+ +G+G+YG +AY V + + ++++I+ R +H NV+ +R
Sbjct: 49 QYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRF-RHENVIGIR 107
Query: 401 AYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGG 460
+ + + Y + T L+ + + L + L RG+ +IHS
Sbjct: 108 DILRASTLEAMRDVYIVQDLMETDLYKLLKSQQ--LSNDHICYFLYQILRGLKYIHSAN- 164
Query: 461 PKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPS-------RSAGYRAPEVIETR 513
H ++K SN+LIN D I DFGL + + + + YRAPE++
Sbjct: 165 --VLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNS 222
Query: 514 KHSHKS-DVYSFGVLLLEMLTGK 535
K KS D++S G +L EML+ +
Sbjct: 223 KGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 91/207 (43%), Gaps = 30/207 (14%)
Query: 344 EVLGKGSYGTAYKAVL----EESTTXXXXXXXXXXXXXRDFEQQMEIVGRVG--QHPNVV 397
+VLG G +GT +K V E + F+ + + +G H ++V
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 78
Query: 398 PLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGA--GRTPLDWETRVKILLGTARGVAHI 455
L +L V Y GSL + +RGA + L+W ++ A+G+ ++
Sbjct: 79 RLLGLCPGSSLQL-VTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQI------AKGMYYL 131
Query: 456 HSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM---------NVPATPSRSAGYRA 506
G H N+ A NVL+ ++DFG+ L+ + TP + + A
Sbjct: 132 EEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIK---WMA 185
Query: 507 PEVIETRKHSHKSDVYSFGVLLLEMLT 533
E I K++H+SDV+S+GV + E++T
Sbjct: 186 LESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 50/88 (56%), Gaps = 5/88 (5%)
Query: 450 RGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSA-GYRAPE 508
RG+ +IHS H ++K SN+ +N+D + I DFGL T + YRAPE
Sbjct: 143 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPE 199
Query: 509 VIETRKHSHKS-DVYSFGVLLLEMLTGK 535
++ H +++ D++S G ++ E+LTG+
Sbjct: 200 IMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 73/162 (45%), Gaps = 12/162 (7%)
Query: 392 QHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARG 451
+HP + L+ + + D V +Y G L H +R T E R + A
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFT----EERARFY--GAEI 114
Query: 452 VAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPL-MNVPATPSRSAG---YRAP 507
V+ + + + +IK N+++++D I+DFGL ++ AT G Y AP
Sbjct: 115 VSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAP 174
Query: 508 EVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDL 549
EV+E + D + GV++ EM+ G+ P + + + +L
Sbjct: 175 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFEL 216
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 98/224 (43%), Gaps = 46/224 (20%)
Query: 346 LGKGSYGTAYKAVLEES-----TTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLR 400
LGKG+YG +K++ + R F + M I+ + H N+V L
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIM-ILTELSGHENIVNLL 75
Query: 401 AYYYSKDEK--LLVYDYFASGSLSTLLHGN-RGAGRTPLDWETRVKILLGTARGVAHIHS 457
+ +++ LV+DY + T LH R P+ + V L+ + + ++HS
Sbjct: 76 NVLRADNDRDVYLVFDY-----METDLHAVIRANILEPVHKQYVVYQLI---KVIKYLHS 127
Query: 458 MGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM--------NVPATPSRSA------- 502
G H ++K SN+L+N + ++DFGL+ N+P + + +
Sbjct: 128 GG---LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQ 184
Query: 503 ----------GYRAPEV-IETRKHSHKSDVYSFGVLLLEMLTGK 535
YRAPE+ + + K++ D++S G +L E+L GK
Sbjct: 185 PILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Query: 450 RGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSA-GYRAPE 508
RG+ +IHS H ++K SN+ +N+D + I DFGL + T + YRAPE
Sbjct: 165 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 221
Query: 509 VIETRKHSHKS-DVYSFGVLLLEMLTGKA 536
++ H + + D++S G ++ E+LTG+
Sbjct: 222 IMLNWMHYNMTVDIWSVGCIMAELLTGRT 250
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 90/228 (39%), Gaps = 29/228 (12%)
Query: 345 VLGKGSYGTAY--KAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQ--HPNVVPLR 400
VLGKGS+G K + D E + V + Q HPN++ L
Sbjct: 56 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 115
Query: 401 AYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGG 460
++ K LV + + G L + R +I+ G+ ++H
Sbjct: 116 EFFEDKGYFYLVGEVYTGGELFDEI-----ISRKRFSEVDAARIIRQVLSGITYMHK--- 167
Query: 461 PKFTHGNIKASNVLI---NQDLDGCISDFGLTPLMNVPATPSRSAG---YRAPEVIETRK 514
K H ++K N+L+ ++D + I DFGL+ G Y APEV+
Sbjct: 168 NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHG-T 226
Query: 515 HSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMV----------DLPRW 552
+ K DV+S GV+L +L+G P D++ +LP+W
Sbjct: 227 YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQW 274
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 73/157 (46%), Gaps = 14/157 (8%)
Query: 387 VGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILL 446
+ +V HPN+V L ++ LV +Y + G + L + GR + E R K
Sbjct: 66 IXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAH---GRXK-EKEARAK-FR 120
Query: 447 GTARGVAHIHSMGGPKF-THGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG-- 503
V + H KF H ++KA N+L++ D + I+DFG + G
Sbjct: 121 QIVSAVQYCHQ----KFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFCGAP 176
Query: 504 -YRAPEVIETRKHSH-KSDVYSFGVLLLEMLTGKAPL 538
Y APE+ + +K+ + DV+S GV+L +++G P
Sbjct: 177 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 90/228 (39%), Gaps = 29/228 (12%)
Query: 345 VLGKGSYGTAY--KAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQ--HPNVVPLR 400
VLGKGS+G K + D E + V + Q HPN++ L
Sbjct: 57 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 116
Query: 401 AYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGG 460
++ K LV + + G L + R +I+ G+ ++H
Sbjct: 117 EFFEDKGYFYLVGEVYTGGELFDEI-----ISRKRFSEVDAARIIRQVLSGITYMHK--- 168
Query: 461 PKFTHGNIKASNVLI---NQDLDGCISDFGLTPLMNVPATPSRSAG---YRAPEVIETRK 514
K H ++K N+L+ ++D + I DFGL+ G Y APEV+
Sbjct: 169 NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHG-T 227
Query: 515 HSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMV----------DLPRW 552
+ K DV+S GV+L +L+G P D++ +LP+W
Sbjct: 228 YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQW 275
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 73/162 (45%), Gaps = 12/162 (7%)
Query: 392 QHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARG 451
+HP + L+ + + D V +Y G L H +R T E R + A
Sbjct: 68 RHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFT----EERARFY--GAEI 119
Query: 452 VAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPL-MNVPATPSRSAG---YRAP 507
V+ + + + +IK N+++++D I+DFGL ++ AT G Y AP
Sbjct: 120 VSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAP 179
Query: 508 EVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDL 549
EV+E + D + GV++ EM+ G+ P + + + +L
Sbjct: 180 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFEL 221
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 63/138 (45%), Gaps = 16/138 (11%)
Query: 410 LLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIK 469
+LV + G L+ L NR + ++++ + G+ ++ F H ++
Sbjct: 103 MLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGMKYLEE---SNFVHRDLA 154
Query: 470 ASNVLINQDLDGCISDFGLTPLMNVPATPSRS-------AGYRAPEVIETRKHSHKSDVY 522
A NVL+ ISDFGL+ + ++ + APE I K S KSDV+
Sbjct: 155 ARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVW 214
Query: 523 SFGVLLLEMLT-GKAPLQ 539
SFGVL+ E + G+ P +
Sbjct: 215 SFGVLMWEAFSYGQKPYR 232
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 63/138 (45%), Gaps = 16/138 (11%)
Query: 410 LLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIK 469
+LV + G L+ L NR + ++++ + G+ ++ F H ++
Sbjct: 103 MLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGMKYLEE---SNFVHRDLA 154
Query: 470 ASNVLINQDLDGCISDFGLTPLMNVPATPSRS-------AGYRAPEVIETRKHSHKSDVY 522
A NVL+ ISDFGL+ + ++ + APE I K S KSDV+
Sbjct: 155 ARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVW 214
Query: 523 SFGVLLLEMLT-GKAPLQ 539
SFGVL+ E + G+ P +
Sbjct: 215 SFGVLMWEAFSYGQKPYR 232
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 63/138 (45%), Gaps = 16/138 (11%)
Query: 410 LLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIK 469
+LV + G L+ L NR + ++++ + G+ ++ F H ++
Sbjct: 87 MLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGMKYLEE---SNFVHRDLA 138
Query: 470 ASNVLINQDLDGCISDFGLTPLMNVPATPSRS-------AGYRAPEVIETRKHSHKSDVY 522
A NVL+ ISDFGL+ + ++ + APE I K S KSDV+
Sbjct: 139 ARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYYKFSSKSDVW 198
Query: 523 SFGVLLLEMLT-GKAPLQ 539
SFGVL+ E + G+ P +
Sbjct: 199 SFGVLMWEAFSYGQKPYR 216
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 15/163 (9%)
Query: 393 HPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGV 452
H +V L + ++ +Y A+G L L R +T + LL + V
Sbjct: 69 HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT--------QQLLEMCKDV 120
Query: 453 AH-IHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTP-LMNVPATPSRSAG----YRA 506
+ + +F H ++ A N L+N +SDFGL+ +++ T S + +
Sbjct: 121 CEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSP 180
Query: 507 PEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVD 548
PEV+ K S KSD+++FGVL+ E+ + GK P + T + +
Sbjct: 181 PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAE 223
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 83/183 (45%), Gaps = 30/183 (16%)
Query: 379 DFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDW 438
+ E+++ I+ +V HPN++ L Y ++ + +L+ + + G L L A + L
Sbjct: 61 EIEREVSILRQV-LHPNIITLHDVYENRTDVVLILELVSGGELFDFL-----AQKESLSE 114
Query: 439 ETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCIS-------DFGL--- 488
E + GV ++H+ K H ++K N+++ LD I DFGL
Sbjct: 115 EEATSFIKQILDGVNYLHT---KKIAHFDLKPENIML---LDKNIPIPHIKLIDFGLAHE 168
Query: 489 ----TPLMNVPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRD 544
N+ TP + APE++ ++D++S GV+ +L+G +P T+
Sbjct: 169 IEDGVEFKNIFGTPE----FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ 224
Query: 545 DMV 547
+ +
Sbjct: 225 ETL 227
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 90/218 (41%), Gaps = 21/218 (9%)
Query: 333 FDLEDLLRASAEVLGKGSYGTAY--KAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRV 390
+D E VLGKG+YG Y + + + + +++ + +
Sbjct: 3 YDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHL 62
Query: 391 GQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPL-DWETRVKILLGTA 449
+H N+V + + + GSLS LL G PL D E +
Sbjct: 63 -KHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWG----PLKDNEQTIGFYTKQI 117
Query: 450 -RGVAHIHSMGGPKFTHGNIKASNVLINQDLDGC--ISDFG----LTPLMNVPATPSRSA 502
G+ ++H + H +IK NVLIN G ISDFG L + T + +
Sbjct: 118 LEGLKYLHD---NQIVHRDIKGDNVLINT-YSGVLKISDFGTSKRLAGINPCTETFTGTL 173
Query: 503 GYRAPEVIET--RKHSHKSDVYSFGVLLLEMLTGKAPL 538
Y APE+I+ R + +D++S G ++EM TGK P
Sbjct: 174 QYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPF 211
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 63/138 (45%), Gaps = 16/138 (11%)
Query: 410 LLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIK 469
+LV + G L+ L NR + ++++ + G+ ++ F H ++
Sbjct: 93 MLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGMKYLEE---SNFVHRDLA 144
Query: 470 ASNVLINQDLDGCISDFGLTPLMNVPATPSRS-------AGYRAPEVIETRKHSHKSDVY 522
A NVL+ ISDFGL+ + ++ + APE I K S KSDV+
Sbjct: 145 ARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVW 204
Query: 523 SFGVLLLEMLT-GKAPLQ 539
SFGVL+ E + G+ P +
Sbjct: 205 SFGVLMWEAFSYGQKPYR 222
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 63/138 (45%), Gaps = 16/138 (11%)
Query: 410 LLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIK 469
+LV + G L+ L NR + ++++ + G+ ++ F H ++
Sbjct: 83 MLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGMKYLEE---SNFVHRDLA 134
Query: 470 ASNVLINQDLDGCISDFGLTPLMNVPATPSRS-------AGYRAPEVIETRKHSHKSDVY 522
A NVL+ ISDFGL+ + ++ + APE I K S KSDV+
Sbjct: 135 ARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVW 194
Query: 523 SFGVLLLEMLT-GKAPLQ 539
SFGVL+ E + G+ P +
Sbjct: 195 SFGVLMWEAFSYGQKPYR 212
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 118/287 (41%), Gaps = 45/287 (15%)
Query: 346 LGKGSYGTAYKAVL-----EESTTXXXXXXXXXXXXXRD---FEQQMEIVGRVGQHPNVV 397
LG+GS+G Y+ V +E T R+ F + ++ H +VV
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH-HVV 91
Query: 398 PLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGR-----TPLDWETRVKILLGTARGV 452
L L++ + G L + L R A P +++ A G+
Sbjct: 92 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGM 151
Query: 453 AHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG--------Y 504
A++++ KF H ++ A N ++ +D I DFG+T ++ T G +
Sbjct: 152 AYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMT--RDIYETDYYRKGGKGLLPVRW 206
Query: 505 RAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTA 563
+PE ++ + SDV+SFGV+L E+ T + P Q + + V+R
Sbjct: 207 MSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN----------EQVLRFVMEG 256
Query: 564 EVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEE 610
+ D + N + + +++++ C P MRP+ E++ I+E
Sbjct: 257 GLLD----KPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSIKE 296
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 15/163 (9%)
Query: 393 HPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGV 452
H +V L + ++ +Y A+G L L R +T + LL + V
Sbjct: 78 HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT--------QQLLEMCKDV 129
Query: 453 AH-IHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTP-LMNVPATPSRSAG----YRA 506
+ + +F H ++ A N L+N +SDFGL+ +++ T S + +
Sbjct: 130 CEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSP 189
Query: 507 PEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVD 548
PEV+ K S KSD+++FGVL+ E+ + GK P + T + +
Sbjct: 190 PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAE 232
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 63/138 (45%), Gaps = 16/138 (11%)
Query: 410 LLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIK 469
+LV + G L+ L NR + ++++ + G+ ++ F H ++
Sbjct: 81 MLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGMKYLEE---SNFVHRDLA 132
Query: 470 ASNVLINQDLDGCISDFGLTPLMNVPATPSRS-------AGYRAPEVIETRKHSHKSDVY 522
A NVL+ ISDFGL+ + ++ + APE I K S KSDV+
Sbjct: 133 ARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVW 192
Query: 523 SFGVLLLEMLT-GKAPLQ 539
SFGVL+ E + G+ P +
Sbjct: 193 SFGVLMWEAFSYGQKPYR 210
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 63/138 (45%), Gaps = 16/138 (11%)
Query: 410 LLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIK 469
+LV + G L+ L NR + ++++ + G+ ++ F H ++
Sbjct: 101 MLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGMKYLEE---SNFVHRDLA 152
Query: 470 ASNVLINQDLDGCISDFGLTPLMNVPATPSRS-------AGYRAPEVIETRKHSHKSDVY 522
A NVL+ ISDFGL+ + ++ + APE I K S KSDV+
Sbjct: 153 ARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVW 212
Query: 523 SFGVLLLEMLT-GKAPLQ 539
SFGVL+ E + G+ P +
Sbjct: 213 SFGVLMWEAFSYGQKPYR 230
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 63/138 (45%), Gaps = 16/138 (11%)
Query: 410 LLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIK 469
+LV + G L+ L NR + ++++ + G+ ++ F H ++
Sbjct: 87 MLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGMKYLEE---SNFVHRDLA 138
Query: 470 ASNVLINQDLDGCISDFGLTPLMNVPATPSRS-------AGYRAPEVIETRKHSHKSDVY 522
A NVL+ ISDFGL+ + ++ + APE I K S KSDV+
Sbjct: 139 ARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVW 198
Query: 523 SFGVLLLEMLT-GKAPLQ 539
SFGVL+ E + G+ P +
Sbjct: 199 SFGVLMWEAFSYGQKPYR 216
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 118/287 (41%), Gaps = 45/287 (15%)
Query: 346 LGKGSYGTAYKAVL-----EESTTXXXXXXXXXXXXXRD---FEQQMEIVGRVGQHPNVV 397
LG+GS+G Y+ V +E T R+ F + ++ H +VV
Sbjct: 18 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH-HVV 76
Query: 398 PLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGR-----TPLDWETRVKILLGTARGV 452
L L++ + G L + L R P +++ A G+
Sbjct: 77 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 136
Query: 453 AHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG--------Y 504
A++++ KF H ++ A N ++ +D I DFG+T ++ T G +
Sbjct: 137 AYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMT--RDIXETDXXRKGGKGLLPVRW 191
Query: 505 RAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTA 563
+PE ++ + SDV+SFGV+L E+ T + P Q + + V+R
Sbjct: 192 MSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN----------EQVLRFVMEG 241
Query: 564 EVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEE 610
+ D + N + +++++++ C P MRP+ E++ I+E
Sbjct: 242 GLLD----KPDNCPDMLLELMRM---CWQYNPKMRPSFLEIISSIKE 281
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 73/162 (45%), Gaps = 12/162 (7%)
Query: 392 QHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARG 451
+HP + L+ + + D V +Y G L H +R T E R + A
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFT----EERARFY--GAEI 114
Query: 452 VAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPL-MNVPATPSRSAG---YRAP 507
V+ + + + +IK N+++++D I+DFGL ++ AT G Y AP
Sbjct: 115 VSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAP 174
Query: 508 EVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDL 549
EV+E + D + GV++ EM+ G+ P + + + +L
Sbjct: 175 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFEL 216
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 98/264 (37%), Gaps = 57/264 (21%)
Query: 383 QMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRV 442
+++I+ +GQH N+V L L++ +Y G L L R R L+ +
Sbjct: 99 ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFL---RRKSRV-LETDPAF 154
Query: 443 KILLGTA--RGVAHIHS--------MGGPKFTHGNIKASNVLINQDLDGCISDFGLT-PL 491
I TA R + H S + H ++ A NVL+ I DFGL +
Sbjct: 155 AIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDI 214
Query: 492 MN-----VPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDD 545
MN V + APE I ++ +SDV+S+G+LL E+ + G P +
Sbjct: 215 MNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS 274
Query: 546 MVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQ----------IGMACVAKVP 595
+F + ++ QM Q I AC A P
Sbjct: 275 --------------------------KFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEP 308
Query: 596 DMRPNMDEVVRMIEEVRQSDSENR 619
RP ++ ++E Q D R
Sbjct: 309 THRPTFQQICSFLQEQAQEDRRER 332
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 73/162 (45%), Gaps = 12/162 (7%)
Query: 392 QHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARG 451
+HP + L+ + + D V +Y G L H +R T E R + A
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFT----EERARFY--GAEI 114
Query: 452 VAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPL-MNVPATPSRSAG---YRAP 507
V+ + + + +IK N+++++D I+DFGL ++ AT G Y AP
Sbjct: 115 VSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAP 174
Query: 508 EVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDL 549
EV+E + D + GV++ EM+ G+ P + + + +L
Sbjct: 175 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFEL 216
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Query: 450 RGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSA-GYRAPE 508
RG+ +IHS H ++K SN+ +N+D + I DFGL + + YRAPE
Sbjct: 159 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVATRWYRAPE 215
Query: 509 VIETRKHSHKS-DVYSFGVLLLEMLTGKA 536
++ H +++ D++S G ++ E+LTG+
Sbjct: 216 IMLNWMHYNQTVDIWSVGCIMAELLTGRT 244
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 73/162 (45%), Gaps = 12/162 (7%)
Query: 392 QHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARG 451
+HP + L+ + + D V +Y G L H +R T E R + A
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFT----EERARFY--GAEI 114
Query: 452 VAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPL-MNVPATPSRSAG---YRAP 507
V+ + + + +IK N+++++D I+DFGL ++ AT G Y AP
Sbjct: 115 VSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAP 174
Query: 508 EVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDL 549
EV+E + D + GV++ EM+ G+ P + + + +L
Sbjct: 175 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFEL 216
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 72/178 (40%), Gaps = 25/178 (14%)
Query: 393 HPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGV 452
HPN++ L ++ K LV + + G L + R I+ G
Sbjct: 63 HPNIMKLYEFFEDKRNYYLVMEVYRGGELF-----DEIILRQKFSEVDAAVIMKQVLSGT 117
Query: 453 AHIHSMGGPKFTHGNIKASNVLI---NQDLDGCISDFGLTPLMNVPATPSRSAG---YRA 506
++H H ++K N+L+ ++D I DFGL+ V G Y A
Sbjct: 118 TYLHK---HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIA 174
Query: 507 PEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMV----------DLPRWVQ 554
PEV+ +K+ K DV+S GV+L +L G P T +++ D P W Q
Sbjct: 175 PEVLR-KKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQ 231
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 73/162 (45%), Gaps = 12/162 (7%)
Query: 392 QHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARG 451
+HP + L+ + + D V +Y G L H +R T E R + A
Sbjct: 66 RHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFT----EERARFY--GAEI 117
Query: 452 VAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPL-MNVPATPSRSAG---YRAP 507
V+ + + + +IK N+++++D I+DFGL ++ AT G Y AP
Sbjct: 118 VSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAP 177
Query: 508 EVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDL 549
EV+E + D + GV++ EM+ G+ P + + + +L
Sbjct: 178 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFEL 219
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 72/178 (40%), Gaps = 25/178 (14%)
Query: 393 HPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGV 452
HPN++ L ++ K LV + + G L + R I+ G
Sbjct: 80 HPNIMKLYEFFEDKRNYYLVMEVYRGGELF-----DEIILRQKFSEVDAAVIMKQVLSGT 134
Query: 453 AHIHSMGGPKFTHGNIKASNVLI---NQDLDGCISDFGLTPLMNVPATPSRSAG---YRA 506
++H H ++K N+L+ ++D I DFGL+ V G Y A
Sbjct: 135 TYLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIA 191
Query: 507 PEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMV----------DLPRWVQ 554
PEV+ +K+ K DV+S GV+L +L G P T +++ D P W Q
Sbjct: 192 PEVLR-KKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQ 248
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 73/162 (45%), Gaps = 12/162 (7%)
Query: 392 QHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARG 451
+HP + L+ + + D V +Y G L H +R T E R + A
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFT----EERARFY--GAEI 114
Query: 452 VAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPL-MNVPATPSRSAG---YRAP 507
V+ + + + +IK N+++++D I+DFGL ++ AT G Y AP
Sbjct: 115 VSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAP 174
Query: 508 EVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDL 549
EV+E + D + GV++ EM+ G+ P + + + +L
Sbjct: 175 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFEL 216
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 118/287 (41%), Gaps = 45/287 (15%)
Query: 346 LGKGSYGTAYKAVL-----EESTTXXXXXXXXXXXXXRD---FEQQMEIVGRVGQHPNVV 397
LG+GS+G Y+ V +E T R+ F + ++ H +VV
Sbjct: 23 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH-HVV 81
Query: 398 PLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGR-----TPLDWETRVKILLGTARGV 452
L L++ + G L + L R A P +++ A G+
Sbjct: 82 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGM 141
Query: 453 AHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG--------Y 504
A++++ KF H ++ A N ++ +D I DFG+T ++ T G +
Sbjct: 142 AYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMT--RDIYETDYYRKGGKGLLPVRW 196
Query: 505 RAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTA 563
+PE ++ + SDV+SFGV+L E+ T + P Q + + V+R
Sbjct: 197 MSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN----------EQVLRFVMEG 246
Query: 564 EVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEE 610
+ D + N + + +++++ C P MRP+ E++ I+E
Sbjct: 247 GLLD----KPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSIKE 286
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 78/174 (44%), Gaps = 23/174 (13%)
Query: 380 FEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLL--VYDYFASGSLSTLLHGNRGAGRTPLD 437
F ++ +I+ P VV L +Y +D++ L V +Y G L L+ +
Sbjct: 121 FWEERDIMA-FANSPWVVQL--FYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARF 177
Query: 438 WETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA- 496
+ V + L IHSMG F H ++K N+L+++ ++DFG MN
Sbjct: 178 YTAEVVLALDA------IHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGM 228
Query: 497 ----TPSRSAGYRAPEVIETR----KHSHKSDVYSFGVLLLEMLTGKAPLQSPT 542
T + Y +PEV++++ + + D +S GV L EML G P + +
Sbjct: 229 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS 282
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 78/174 (44%), Gaps = 23/174 (13%)
Query: 380 FEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLL--VYDYFASGSLSTLLHGNRGAGRTPLD 437
F ++ +I+ P VV L +Y +D++ L V +Y G L L+ +
Sbjct: 116 FWEERDIMA-FANSPWVVQL--FYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARF 172
Query: 438 WETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA- 496
+ V + L IHSMG F H ++K N+L+++ ++DFG MN
Sbjct: 173 YTAEVVLALDA------IHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGM 223
Query: 497 ----TPSRSAGYRAPEVIETR----KHSHKSDVYSFGVLLLEMLTGKAPLQSPT 542
T + Y +PEV++++ + + D +S GV L EML G P + +
Sbjct: 224 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS 277
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Query: 450 RGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSA-GYRAPE 508
RG+ +IHS H ++K SN+ +N+D + I DFGL + + YRAPE
Sbjct: 156 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGXVATRWYRAPE 212
Query: 509 VIETRKHSHKS-DVYSFGVLLLEMLTGKA 536
++ H +++ D++S G ++ E+LTG+
Sbjct: 213 IMLNWMHYNQTVDIWSVGCIMAELLTGRT 241
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 87/211 (41%), Gaps = 21/211 (9%)
Query: 337 DLLRASAEVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRD-----FEQQMEIVGRVG 391
DLLR V+G+GSY L+++ D + + + +
Sbjct: 23 DLLR----VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS 78
Query: 392 QHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARG 451
HP +V L + + ++ V +Y G L + H R + L E +
Sbjct: 79 NHPFLVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQR---QRKLPEEHARFYSAEISLA 133
Query: 452 VAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA-TPSRSAG---YRAP 507
+ ++H G + ++K NVL++ + ++D+G+ P T S G Y AP
Sbjct: 134 LNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAP 190
Query: 508 EVIETRKHSHKSDVYSFGVLLLEMLTGKAPL 538
E++ + D ++ GVL+ EM+ G++P
Sbjct: 191 EILRGEDYGFSVDWWALGVLMFEMMAGRSPF 221
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 117/287 (40%), Gaps = 45/287 (15%)
Query: 346 LGKGSYGTAYKAVL-----EESTTXXXXXXXXXXXXXRD---FEQQMEIVGRVGQHPNVV 397
LG+GS+G Y+ V +E T R+ F + ++ H +VV
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH-HVV 85
Query: 398 PLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGR-----TPLDWETRVKILLGTARGV 452
L L++ + G L + L R P +++ A G+
Sbjct: 86 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 145
Query: 453 AHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG--------Y 504
A++++ KF H ++ A N ++ +D I DFG+T ++ T G +
Sbjct: 146 AYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMT--RDIXETDXXRKGGKGLLPVRW 200
Query: 505 RAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTA 563
+PE ++ + SDV+SFGV+L E+ T + P Q + + V+R
Sbjct: 201 MSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN----------EQVLRFVMEG 250
Query: 564 EVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEE 610
+ D + N + + +++++ C P MRP+ E++ I+E
Sbjct: 251 GLLD----KPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSIKE 290
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 19/107 (17%)
Query: 442 VKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN-------- 493
+ I + A V +HS G H ++K SN+ D + DFGL M+
Sbjct: 167 LHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 494 ---VPATPSRSAG-----YRAPEVIETRKHSHKSDVYSFGVLLLEML 532
+PA + Y +PE I +SHK D++S G++L E+L
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 105/250 (42%), Gaps = 61/250 (24%)
Query: 387 VGRVGQHPNVVPLRAYYYSKDEKLLV----------YDYFASGSLSTLLHGNRGAGRTPL 436
VG G HP V+ L ++ +++ +LV +DY G G G +
Sbjct: 91 VGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITE-------KGPLGEGPS-- 141
Query: 437 DWETRVKILLG-TARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGC--ISDFGLTPLM- 492
+ G + H HS G H +IK N+LI+ GC + DFG L+
Sbjct: 142 ------RCFFGQVVAAIQHCHSRG---VVHRDIKDENILIDLR-RGCAKLIDFGSGALLH 191
Query: 493 NVPATP-SRSAGYRAPEVIETRK-HSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLP 550
+ P T + Y PE I + H+ + V+S G+LL +M+ G P + RD
Sbjct: 192 DEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFE---RDQ----- 243
Query: 551 RWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEE 610
E+ + EL ++ + +++ C+A P RP+++E+ +++
Sbjct: 244 -------------EILEAELHFPAHVSPDCCALIR---RCLAPKPSSRPSLEEI--LLDP 285
Query: 611 VRQSDSENRP 620
Q+ +E+ P
Sbjct: 286 WMQTPAEDVP 295
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 78/210 (37%), Gaps = 28/210 (13%)
Query: 344 EVLGKGSYGTAYKAVL----EESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPL 399
E LGKG++ + V +E + E++ I R+ +HPN+V L
Sbjct: 28 EELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARIC-RLLKHPNIVRL 86
Query: 400 RAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMG 459
+ L++D G L + R + V H H MG
Sbjct: 87 HDSISEEGHHYLIFDLVTGGELFEDI-----VAREYYSEADASHCIQQILEAVLHCHQMG 141
Query: 460 GPKFTHGNIKASNVLINQDLDGC---ISDFGLT--------PLMNVPATPSRSAGYRAPE 508
H ++K N+L+ L G ++DFGL TP GY +PE
Sbjct: 142 ---VVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTP----GYLSPE 194
Query: 509 VIETRKHSHKSDVYSFGVLLLEMLTGKAPL 538
V+ + D+++ GV+L +L G P
Sbjct: 195 VLRKDPYGKPVDLWACGVILYILLVGYPPF 224
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 78/174 (44%), Gaps = 23/174 (13%)
Query: 380 FEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLL--VYDYFASGSLSTLLHGNRGAGRTPLD 437
F ++ +I+ P VV L +Y +D++ L V +Y G L L+ +
Sbjct: 121 FWEERDIMA-FANSPWVVQL--FYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARF 177
Query: 438 WETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA- 496
+ V + L IHSMG F H ++K N+L+++ ++DFG MN
Sbjct: 178 YTAEVVLALDA------IHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGM 228
Query: 497 ----TPSRSAGYRAPEVIETR----KHSHKSDVYSFGVLLLEMLTGKAPLQSPT 542
T + Y +PEV++++ + + D +S GV L EML G P + +
Sbjct: 229 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS 282
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 97/223 (43%), Gaps = 29/223 (13%)
Query: 335 LEDLLRASAEVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEI-VGRVGQH 393
+EDL +G+G+YG YKA ++ EI + R +H
Sbjct: 18 VEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKH 77
Query: 394 PNVVPLRAYYYSKDEK--LLVYDYFASGSLSTLLHGNRG--AGRTPLDWETRVKILLGTA 449
PNV+ L+ + S ++ L++DY A L ++ +R A + P V++ G
Sbjct: 78 PNVISLQKVFLSHADRKVWLLFDY-AEHDLWHIIKFHRASKANKKP------VQLPRGMV 130
Query: 450 RGVAH-----IHSMGGPKFTHGNIKASNVLIN----QDLDGCISDFGLTPLMNVPATPSR 500
+ + + IH + H ++K +N+L+ + I+D G L N P P
Sbjct: 131 KSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLA 190
Query: 501 -------SAGYRAPEVIETRKHSHKS-DVYSFGVLLLEMLTGK 535
+ YRAPE++ +H K+ D+++ G + E+LT +
Sbjct: 191 DLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSE 233
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 87/211 (41%), Gaps = 21/211 (9%)
Query: 337 DLLRASAEVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRD-----FEQQMEIVGRVG 391
DLLR V+G+GSY L+++ D + + + +
Sbjct: 8 DLLR----VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS 63
Query: 392 QHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARG 451
HP +V L + + ++ V +Y G L + H R + L E +
Sbjct: 64 NHPFLVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQR---QRKLPEEHARFYSAEISLA 118
Query: 452 VAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA-TPSRSAG---YRAP 507
+ ++H G + ++K NVL++ + ++D+G+ P T S G Y AP
Sbjct: 119 LNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAP 175
Query: 508 EVIETRKHSHKSDVYSFGVLLLEMLTGKAPL 538
E++ + D ++ GVL+ EM+ G++P
Sbjct: 176 EILRGEDYGFSVDWWALGVLMFEMMAGRSPF 206
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 24/207 (11%)
Query: 346 LGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVG-RVGQHPNVVPLRAYYY 404
+G G++G A + + ++ + D + EI+ R +HPN+V +
Sbjct: 27 IGSGNFGVA-RLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVIL 85
Query: 405 SKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFT 464
+ +V +Y + G L + AGR D E R GV++ H+M +
Sbjct: 86 TPTHLAIVMEYASGGELFERI---CNAGRFSED-EARF-FFQQLISGVSYCHAM---QVC 137
Query: 465 HGNIKASNVLINQDLDGC------ISDFGLTPLMNVPATPSRSAG---YRAPEVIETRKH 515
H ++K N L LDG I FG + + + P + G Y APEV+ +++
Sbjct: 138 HRDLKLENTL----LDGSPAPRLKICAFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEY 193
Query: 516 SHK-SDVYSFGVLLLEMLTGKAPLQSP 541
K +DV+S GV L ML G P + P
Sbjct: 194 DGKVADVWSCGVTLYVMLVGAYPFEDP 220
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 87/211 (41%), Gaps = 21/211 (9%)
Query: 337 DLLRASAEVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRD-----FEQQMEIVGRVG 391
DLLR V+G+GSY L+++ D + + + +
Sbjct: 55 DLLR----VIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQAS 110
Query: 392 QHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARG 451
HP +V L + + ++ V +Y G L + H R + L E +
Sbjct: 111 NHPFLVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQR---QRKLPEEHARFYSAEISLA 165
Query: 452 VAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA-TPSRSAG---YRAP 507
+ ++H G + ++K NVL++ + ++D+G+ P T S G Y AP
Sbjct: 166 LNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAP 222
Query: 508 EVIETRKHSHKSDVYSFGVLLLEMLTGKAPL 538
E++ + D ++ GVL+ EM+ G++P
Sbjct: 223 EILRGEDYGFSVDWWALGVLMFEMMAGRSPF 253
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 24/207 (11%)
Query: 346 LGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVG-RVGQHPNVVPLRAYYY 404
+G G++G A + + ++ + D + EI+ R +HPN+V +
Sbjct: 27 IGSGNFGVA-RLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVIL 85
Query: 405 SKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFT 464
+ +V +Y + G L + AGR D E R GV++ H+M +
Sbjct: 86 TPTHLAIVMEYASGGELFERI---CNAGRFSED-EARF-FFQQLISGVSYCHAM---QVC 137
Query: 465 HGNIKASNVLINQDLDGC------ISDFGLTPLMNVPATPSRSAG---YRAPEVIETRKH 515
H ++K N L LDG I FG + + + P + G Y APEV+ +++
Sbjct: 138 HRDLKLENTL----LDGSPAPRLKICAFGYSKSSVLHSQPKDTVGTPAYIAPEVLLKKEY 193
Query: 516 SHK-SDVYSFGVLLLEMLTGKAPLQSP 541
K +DV+S GV L ML G P + P
Sbjct: 194 DGKVADVWSCGVTLYVMLVGAYPFEDP 220
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 84/183 (45%), Gaps = 30/183 (16%)
Query: 379 DFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDW 438
+ E+++ I+ + +HPN++ L + +K + +L+ + + G L L A + L
Sbjct: 61 EIEREVNILREI-RHPNIITLHDIFENKTDVVLILELVSGGELFDFL-----AEKESLTE 114
Query: 439 ETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCIS-------DFGLT-- 489
+ + L GV ++HS + H ++K N+++ LD + DFG+
Sbjct: 115 DEATQFLKQILDGVHYLHS---KRIAHFDLKPENIML---LDKNVPNPRIKLIDFGIAHK 168
Query: 490 -----PLMNVPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRD 544
N+ TP + APE++ ++D++S GV+ +L+G +P T+
Sbjct: 169 IEAGNEFKNIFGTPE----FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQ 224
Query: 545 DMV 547
+ +
Sbjct: 225 ETL 227
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 88/228 (38%), Gaps = 29/228 (12%)
Query: 345 VLGKGSYGTAY--KAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQ--HPNVVPLR 400
VLGKGS+G K + D E + V + Q HPN+ L
Sbjct: 33 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLY 92
Query: 401 AYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGG 460
++ K LV + + G L + R +I+ G+ + H
Sbjct: 93 EFFEDKGYFYLVGEVYTGGELFDEI-----ISRKRFSEVDAARIIRQVLSGITYXHK--- 144
Query: 461 PKFTHGNIKASNVLI---NQDLDGCISDFGLTPLMNVPATPSRSAG---YRAPEVIETRK 514
K H ++K N+L+ ++D + I DFGL+ G Y APEV+
Sbjct: 145 NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEVLHG-T 203
Query: 515 HSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMV----------DLPRW 552
+ K DV+S GV+L +L+G P D++ +LP+W
Sbjct: 204 YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQW 251
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 84/183 (45%), Gaps = 30/183 (16%)
Query: 379 DFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDW 438
+ E+++ I+ + +HPN++ L + +K + +L+ + + G L L A + L
Sbjct: 75 EIEREVNILREI-RHPNIITLHDIFENKTDVVLILELVSGGELFDFL-----AEKESLTE 128
Query: 439 ETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCIS-------DFGLT-- 489
+ + L GV ++HS + H ++K N+++ LD + DFG+
Sbjct: 129 DEATQFLKQILDGVHYLHS---KRIAHFDLKPENIML---LDKNVPNPRIKLIDFGIAHK 182
Query: 490 -----PLMNVPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRD 544
N+ TP + APE++ ++D++S GV+ +L+G +P T+
Sbjct: 183 IEAGNEFKNIFGTPE----FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQ 238
Query: 545 DMV 547
+ +
Sbjct: 239 ETL 241
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 87/211 (41%), Gaps = 21/211 (9%)
Query: 337 DLLRASAEVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRD-----FEQQMEIVGRVG 391
DLLR V+G+GSY L+++ D + + + +
Sbjct: 12 DLLR----VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS 67
Query: 392 QHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARG 451
HP +V L + + ++ V +Y G L + H R + L E +
Sbjct: 68 NHPFLVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQR---QRKLPEEHARFYSAEISLA 122
Query: 452 VAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA-TPSRSAG---YRAP 507
+ ++H G + ++K NVL++ + ++D+G+ P T S G Y AP
Sbjct: 123 LNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAP 179
Query: 508 EVIETRKHSHKSDVYSFGVLLLEMLTGKAPL 538
E++ + D ++ GVL+ EM+ G++P
Sbjct: 180 EILRGEDYGFSVDWWALGVLMFEMMAGRSPF 210
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 84/183 (45%), Gaps = 30/183 (16%)
Query: 379 DFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDW 438
+ E+++ I+ + +HPN++ L + +K + +L+ + + G L L A + L
Sbjct: 54 EIEREVNILREI-RHPNIITLHDIFENKTDVVLILELVSGGELFDFL-----AEKESLTE 107
Query: 439 ETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCIS-------DFGLT-- 489
+ + L GV ++HS + H ++K N+++ LD + DFG+
Sbjct: 108 DEATQFLKQILDGVHYLHS---KRIAHFDLKPENIML---LDKNVPNPRIKLIDFGIAHK 161
Query: 490 -----PLMNVPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRD 544
N+ TP + APE++ ++D++S GV+ +L+G +P T+
Sbjct: 162 IEAGNEFKNIFGTPE----FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQ 217
Query: 545 DMV 547
+ +
Sbjct: 218 ETL 220
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 99/231 (42%), Gaps = 31/231 (13%)
Query: 330 SYNFDLEDLLRASAEVLGKGSYG---TAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEI 386
S++ ED+ + +VLG+G++ T + + R F +++E+
Sbjct: 5 SFSGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVF-REVEM 63
Query: 387 VGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILL 446
+ + H NV+ L ++ +D LV++ GS+ + +H R + E V ++
Sbjct: 64 LYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFN----ELEASV-VVQ 118
Query: 447 GTARGVAHIHSMGGPKFTHGNIKASNVLI---NQDLDGCISDFGLTPLMNVPA------- 496
A + +H+ G H ++K N+L NQ I DF L + +
Sbjct: 119 DVASALDFLHNKG---IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPIST 175
Query: 497 ----TPSRSAGYRAPEVIETRK-----HSHKSDVYSFGVLLLEMLTGKAPL 538
TP SA Y APEV+E + + D++S GV+L +L+G P
Sbjct: 176 PELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPF 226
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 111/262 (42%), Gaps = 53/262 (20%)
Query: 379 DFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLL------------H 426
DF+++ ++ +PN+V L L+++Y A G L+ L H
Sbjct: 96 DFQREAALMAEF-DNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSH 154
Query: 427 GNRGA-------GRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDL 479
+ G PL ++ I A G+A++ KF H ++ N L+ +++
Sbjct: 155 SDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENM 211
Query: 480 DGCISDFGLTPLMNVPATPSRSAG--------YRAPEVIETRKHSHKSDVYSFGVLLLEM 531
I+DFGL+ N+ + A + PE I +++ +SDV+++GV+L E+
Sbjct: 212 VVKIADFGLS--RNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEI 269
Query: 532 LT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRF-QNIEEEMVQMLQIGMA 589
+ G P + EE V D ++ +N E+ ++++
Sbjct: 270 FSYGLQPY---------------YGMAHEEVIYYVRDGNILACPENCPLELYNLMRL--- 311
Query: 590 CVAKVPDMRPNMDEVVRMIEEV 611
C +K+P RP+ + R+++ +
Sbjct: 312 CWSKLPADRPSFCSIHRILQRM 333
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 18/152 (11%)
Query: 402 YYYSKDEKL-LVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGG 460
Y + D L LV DY+ G L TLL ++ R P E + L A V I S+
Sbjct: 141 YAFQDDNNLYLVMDYYVGGDLLTLL--SKFEDRLP---EEMARFYL--AEMVIAIDSVHQ 193
Query: 461 PKFTHGNIKASNVLINQDLDGCISDFG-LTPLMNVPATPSRSA----GYRAPEVIETR-- 513
+ H +IK N+L++ + ++DFG LM S A Y +PE+++
Sbjct: 194 LHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEG 253
Query: 514 ---KHSHKSDVYSFGVLLLEMLTGKAPLQSPT 542
++ + D +S GV + EML G+ P + +
Sbjct: 254 GKGRYGPECDWWSLGVCMYEMLYGETPFYAES 285
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 94/262 (35%), Gaps = 53/262 (20%)
Query: 383 QMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRV 442
+++I+ +GQH N+V L L++ +Y G L L T +
Sbjct: 99 ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIAN 158
Query: 443 KILLGTARGVAHIHS--------MGGPKFTHGNIKASNVLINQDLDGCISDFGLT-PLMN 493
L + R + H S + H ++ A NVL+ I DFGL +MN
Sbjct: 159 STL--STRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMN 216
Query: 494 -----VPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMV 547
V + APE I ++ +SDV+S+G+LL E+ + G P +
Sbjct: 217 DSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS-- 274
Query: 548 DLPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQ----------IGMACVAKVPDM 597
+F + ++ QM Q I AC A P
Sbjct: 275 ------------------------KFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTH 310
Query: 598 RPNMDEVVRMIEEVRQSDSENR 619
RP ++ ++E Q D R
Sbjct: 311 RPTFQQICSFLQEQAQEDRRER 332
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Query: 450 RGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSA-GYRAPE 508
RG+ +IHS H ++K SN+ +N+D + I FGL + T + YRAPE
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYVATRWYRAPE 192
Query: 509 VIETRKHSHKS-DVYSFGVLLLEMLTGKA 536
++ H +++ D++S G ++ E+LTG+
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 94/228 (41%), Gaps = 18/228 (7%)
Query: 344 EVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQM--EI-VGRVGQHPNVVPLR 400
E +G+G+YGT +KA E+ EI + + +H N+V L
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLH 67
Query: 401 AYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGG 460
+S + LV++ F L G LD E L +G+ HS
Sbjct: 68 DVLHSDKKLTLVFE-FCDQDLKKYFDSCNGD----LDPEIVKSFLFQLLKGLGFCHSRN- 121
Query: 461 PKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP----ATPSRSAGYRAPEVIETRK-H 515
H ++K N+LIN++ + +++FGL +P + + YR P+V+ K +
Sbjct: 122 --VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLY 179
Query: 516 SHKSDVYSFGVLLLEMLTGKAPL--QSPTRDDMVDLPRWVQSVVREEW 561
S D++S G + E+ PL + D + + R + + E+W
Sbjct: 180 STSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQW 227
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Query: 450 RGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSA-GYRAPE 508
RG+ +IHS H ++K SN+ +N+D + I DF L + T + YRAPE
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGYVATRWYRAPE 192
Query: 509 VIETRKHSHKS-DVYSFGVLLLEMLTGKA 536
++ H +++ D++S G ++ E+LTG+
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 117/287 (40%), Gaps = 45/287 (15%)
Query: 346 LGKGSYGTAYKAVL-----EESTTXXXXXXXXXXXXXRD---FEQQMEIVGRVGQHPNVV 397
LG+GS+G Y+ V +E T R+ F + ++ H +VV
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH-HVV 91
Query: 398 PLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGR-----TPLDWETRVKILLGTARGV 452
L L++ + G L + L R P +++ A G+
Sbjct: 92 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 151
Query: 453 AHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG--------Y 504
A++++ KF H ++ A N ++ +D I DFG+T ++ T G +
Sbjct: 152 AYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMT--RDIYETDYYRKGGKGLLPVRW 206
Query: 505 RAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTA 563
+PE ++ + SDV+SFGV+L E+ T + P Q + + V+R
Sbjct: 207 MSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN----------EQVLRFVMEG 256
Query: 564 EVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEE 610
+ D + N + + +++++ C P MRP+ E++ I+E
Sbjct: 257 GLLD----KPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSIKE 296
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 117/287 (40%), Gaps = 45/287 (15%)
Query: 346 LGKGSYGTAYKAVL-----EESTTXXXXXXXXXXXXXRD---FEQQMEIVGRVGQHPNVV 397
LG+GS+G Y+ V +E T R+ F + ++ H +VV
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH-HVV 78
Query: 398 PLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGR-----TPLDWETRVKILLGTARGV 452
L L++ + G L + L R P +++ A G+
Sbjct: 79 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 138
Query: 453 AHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG--------Y 504
A++++ KF H ++ A N ++ +D I DFG+T ++ T G +
Sbjct: 139 AYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMT--RDIYETDYYRKGGKGLLPVRW 193
Query: 505 RAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTA 563
+PE ++ + SDV+SFGV+L E+ T + P Q + + V+R
Sbjct: 194 MSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN----------EQVLRFVMEG 243
Query: 564 EVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEE 610
+ D + N + + +++++ C P MRP+ E++ I+E
Sbjct: 244 GLLD----KPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSIKE 283
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 127/311 (40%), Gaps = 47/311 (15%)
Query: 346 LGKGSYGTAYKAVL-----EESTTXXXXXXXXXXXXXRD---FEQQMEIVGRVGQHPNVV 397
LG+GS+G Y+ V +E T R+ F + ++ H +VV
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH-HVV 84
Query: 398 PLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGR-----TPLDWETRVKILLGTARGV 452
L L++ + G L + L R P +++ A G+
Sbjct: 85 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 144
Query: 453 AHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG--------Y 504
A++++ KF H ++ A N ++ +D I DFG+T ++ T G +
Sbjct: 145 AYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMT--RDIYETDYYRKGGKGLLPVRW 199
Query: 505 RAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTA 563
+PE ++ + SDV+SFGV+L E+ T + P Q + + V+R
Sbjct: 200 MSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN----------EQVLRFVMEG 249
Query: 564 EVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSENRP--S 621
+ D + N + + +++++ C P MRP+ E++ I+E +
Sbjct: 250 GLLD----KPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSIKEEMEPGFREVSFYY 302
Query: 622 SEENKSKDSNV 632
SEENK +++ V
Sbjct: 303 SEENKMENNPV 313
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Query: 450 RGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSA-GYRAPE 508
RG+ +IHS H ++K SN+ +N+D + I D GL + T + YRAPE
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYVATRWYRAPE 192
Query: 509 VIETRKHSHKS-DVYSFGVLLLEMLTGKA 536
++ H +++ D++S G ++ E+LTG+
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 117/287 (40%), Gaps = 45/287 (15%)
Query: 346 LGKGSYGTAYKAVL-----EESTTXXXXXXXXXXXXXRD---FEQQMEIVGRVGQHPNVV 397
LG+GS+G Y+ V +E T R+ F + ++ H +VV
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH-HVV 85
Query: 398 PLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGR-----TPLDWETRVKILLGTARGV 452
L L++ + G L + L R P +++ A G+
Sbjct: 86 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 145
Query: 453 AHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG--------Y 504
A++++ KF H ++ A N ++ +D I DFG+T ++ T G +
Sbjct: 146 AYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMT--RDIYETDYYRKGGKGLLPVRW 200
Query: 505 RAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTA 563
+PE ++ + SDV+SFGV+L E+ T + P Q + + V+R
Sbjct: 201 MSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN----------EQVLRFVMEG 250
Query: 564 EVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEE 610
+ D + N + + +++++ C P MRP+ E++ I+E
Sbjct: 251 GLLD----KPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSIKE 290
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 43/85 (50%), Gaps = 8/85 (9%)
Query: 463 FTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRS-------AGYRAPEVIETRKH 515
F H ++ A NVL+ ISDFGL+ + ++ + APE I K
Sbjct: 490 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF 549
Query: 516 SHKSDVYSFGVLLLEMLT-GKAPLQ 539
S KSDV+SFGVL+ E + G+ P +
Sbjct: 550 SSKSDVWSFGVLMWEAFSYGQKPYR 574
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 43/85 (50%), Gaps = 8/85 (9%)
Query: 463 FTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRS-------AGYRAPEVIETRKH 515
F H ++ A NVL+ ISDFGL+ + ++ + APE I K
Sbjct: 491 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF 550
Query: 516 SHKSDVYSFGVLLLEMLT-GKAPLQ 539
S KSDV+SFGVL+ E + G+ P +
Sbjct: 551 SSKSDVWSFGVLMWEAFSYGQKPYR 575
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 117/287 (40%), Gaps = 45/287 (15%)
Query: 346 LGKGSYGTAYKAVL-----EESTTXXXXXXXXXXXXXRD---FEQQMEIVGRVGQHPNVV 397
LG+GS+G Y+ V +E T R+ F + ++ H +VV
Sbjct: 24 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH-HVV 82
Query: 398 PLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGR-----TPLDWETRVKILLGTARGV 452
L L++ + G L + L R P +++ A G+
Sbjct: 83 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 142
Query: 453 AHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG--------Y 504
A++++ KF H ++ A N ++ +D I DFG+T ++ T G +
Sbjct: 143 AYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMT--RDIYETDYYRKGGKGLLPVRW 197
Query: 505 RAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTA 563
+PE ++ + SDV+SFGV+L E+ T + P Q + + V+R
Sbjct: 198 MSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN----------EQVLRFVMEG 247
Query: 564 EVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEE 610
+ D + N + + +++++ C P MRP+ E++ I+E
Sbjct: 248 GLLD----KPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSIKE 287
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 117/287 (40%), Gaps = 45/287 (15%)
Query: 346 LGKGSYGTAYKAVL-----EESTTXXXXXXXXXXXXXRD---FEQQMEIVGRVGQHPNVV 397
LG+GS+G Y+ V +E T R+ F + ++ H +VV
Sbjct: 55 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH-HVV 113
Query: 398 PLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGR-----TPLDWETRVKILLGTARGV 452
L L++ + G L + L R P +++ A G+
Sbjct: 114 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 173
Query: 453 AHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG--------Y 504
A++++ KF H ++ A N ++ +D I DFG+T ++ T G +
Sbjct: 174 AYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMT--RDIYETDYYRKGGKGLLPVRW 228
Query: 505 RAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTA 563
+PE ++ + SDV+SFGV+L E+ T + P Q + + V+R
Sbjct: 229 MSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN----------EQVLRFVMEG 278
Query: 564 EVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEE 610
+ D + N + + +++++ C P MRP+ E++ I+E
Sbjct: 279 GLLD----KPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSIKE 318
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Query: 450 RGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSA-GYRAPE 508
RG+ +IHS H ++K SN+ +N+D + I D GL + T + YRAPE
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGYVATRWYRAPE 192
Query: 509 VIETRKHSHKS-DVYSFGVLLLEMLTGKA 536
++ H +++ D++S G ++ E+LTG+
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 117/287 (40%), Gaps = 45/287 (15%)
Query: 346 LGKGSYGTAYKAVL-----EESTTXXXXXXXXXXXXXRD---FEQQMEIVGRVGQHPNVV 397
LG+GS+G Y+ V +E T R+ F + ++ H +VV
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH-HVV 84
Query: 398 PLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGR-----TPLDWETRVKILLGTARGV 452
L L++ + G L + L R P +++ A G+
Sbjct: 85 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 144
Query: 453 AHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG--------Y 504
A++++ KF H ++ A N ++ +D I DFG+T ++ T G +
Sbjct: 145 AYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMT--RDIYETDYYRKGGKGLLPVRW 199
Query: 505 RAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTA 563
+PE ++ + SDV+SFGV+L E+ T + P Q + + V+R
Sbjct: 200 MSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN----------EQVLRFVMEG 249
Query: 564 EVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEE 610
+ D + N + + +++++ C P MRP+ E++ I+E
Sbjct: 250 GLLD----KPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSIKE 289
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 82/183 (44%), Gaps = 30/183 (16%)
Query: 379 DFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDW 438
+ E+++ I+ +V H NV+ L Y ++ + +L+ + + G L L A + L
Sbjct: 61 EIEREVSILRQVLHH-NVITLHDVYENRTDVVLILELVSGGELFDFL-----AQKESLSE 114
Query: 439 ETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCI-------SDFGL--- 488
E + GV ++H+ K H ++K N+++ LD I DFGL
Sbjct: 115 EEATSFIKQILDGVNYLHT---KKIAHFDLKPENIML---LDKNIPIPHIKLIDFGLAHE 168
Query: 489 ----TPLMNVPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRD 544
N+ TP + APE++ ++D++S GV+ +L+G +P T+
Sbjct: 169 IEDGVEFKNIFGTPE----FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ 224
Query: 545 DMV 547
+ +
Sbjct: 225 ETL 227
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 82/183 (44%), Gaps = 30/183 (16%)
Query: 379 DFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDW 438
+ E+++ I+ +V H NV+ L Y ++ + +L+ + + G L L A + L
Sbjct: 61 EIEREVSILRQVLHH-NVITLHDVYENRTDVVLILELVSGGELFDFL-----AQKESLSE 114
Query: 439 ETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCI-------SDFGL--- 488
E + GV ++H+ K H ++K N+++ LD I DFGL
Sbjct: 115 EEATSFIKQILDGVNYLHT---KKIAHFDLKPENIML---LDKNIPIPHIKLIDFGLAHE 168
Query: 489 ----TPLMNVPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRD 544
N+ TP + APE++ ++D++S GV+ +L+G +P T+
Sbjct: 169 IEDGVEFKNIFGTPE----FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ 224
Query: 545 DMV 547
+ +
Sbjct: 225 ETL 227
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 82/183 (44%), Gaps = 30/183 (16%)
Query: 379 DFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDW 438
+ E+++ I+ +V H NV+ L Y ++ + +L+ + + G L L A + L
Sbjct: 61 EIEREVSILRQVLHH-NVITLHDVYENRTDVVLILELVSGGELFDFL-----AQKESLSE 114
Query: 439 ETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCI-------SDFGL--- 488
E + GV ++H+ K H ++K N+++ LD I DFGL
Sbjct: 115 EEATSFIKQILDGVNYLHT---KKIAHFDLKPENIML---LDKNIPIPHIKLIDFGLAHE 168
Query: 489 ----TPLMNVPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRD 544
N+ TP + APE++ ++D++S GV+ +L+G +P T+
Sbjct: 169 IEDGVEFKNIFGTPE----FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ 224
Query: 545 DMV 547
+ +
Sbjct: 225 ETL 227
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 82/183 (44%), Gaps = 30/183 (16%)
Query: 379 DFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDW 438
+ E+++ I+ +V H NV+ L Y ++ + +L+ + + G L L A + L
Sbjct: 61 EIEREVSILRQVLHH-NVITLHDVYENRTDVVLILELVSGGELFDFL-----AQKESLSE 114
Query: 439 ETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCI-------SDFGL--- 488
E + GV ++H+ K H ++K N+++ LD I DFGL
Sbjct: 115 EEATSFIKQILDGVNYLHT---KKIAHFDLKPENIML---LDKNIPIPHIKLIDFGLAHE 168
Query: 489 ----TPLMNVPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRD 544
N+ TP + APE++ ++D++S GV+ +L+G +P T+
Sbjct: 169 IEDGVEFKNIFGTPE----FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ 224
Query: 545 DMV 547
+ +
Sbjct: 225 ETL 227
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 93/225 (41%), Gaps = 29/225 (12%)
Query: 335 LEDLLRASAEVLGKGSYGTAYKAV-LEESTTXXXXXXXXXXXXXRD-FEQQMEIVGRVGQ 392
ED+ + ++E+LG+G+Y AV L+ R +++E + +
Sbjct: 10 FEDMYKLTSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQG 69
Query: 393 HPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGV 452
+ N++ L ++ LV++ GS+ L H + + + +++ A +
Sbjct: 70 NKNILELIEFFEDDTRFYLVFEKLQGGSI--LAHIQK---QKHFNEREASRVVRDVAAAL 124
Query: 453 AHIHSMGGPKFTHGNIKASNVLIN-----QDLDGCISDFG--------LTPLMNVP-ATP 498
+H+ G H ++K N+L + C D G TP+ TP
Sbjct: 125 DFLHTKG---IAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTP 181
Query: 499 SRSAGYRAPEVIETRK-----HSHKSDVYSFGVLLLEMLTGKAPL 538
SA Y APEV+E + + D++S GV+L ML+G P
Sbjct: 182 CGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPF 226
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 62/149 (41%), Gaps = 13/149 (8%)
Query: 392 QHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARG 451
+H N+V L K LV+++ L L G LD++ K L G
Sbjct: 82 RHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNG-----LDYQVVQKYLFQIING 136
Query: 452 VAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPAT----PSRSAGYRAP 507
+ HS H +IK N+L++Q + DFG + P + YRAP
Sbjct: 137 IGFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAP 193
Query: 508 E-VIETRKHSHKSDVYSFGVLLLEMLTGK 535
E ++ K+ DV++ G L+ EM G+
Sbjct: 194 ELLVGDVKYGKAVDVWAIGCLVTEMFMGE 222
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 99/258 (38%), Gaps = 44/258 (17%)
Query: 383 QMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGA----------- 431
+++I+ +GQH N+V L L++ +Y G L L A
Sbjct: 84 ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQD 143
Query: 432 --------GRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCI 483
GR PL+ + A+G+A + S H ++ A NVL+ I
Sbjct: 144 PEGLDKEDGR-PLELRDLLHFSSQVAQGMAFLAS---KNCIHRDVAARNVLLTNGHVAKI 199
Query: 484 SDFGLT-PLMN-----VPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAP 537
DFGL +MN V + APE I ++ +SDV+S+G+LL E+ +
Sbjct: 200 GDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS---- 255
Query: 538 LQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDM 597
+ L + +V ++ V D M + + I AC A P
Sbjct: 256 ---------LGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPK--NIYSIMQACWALEPTH 304
Query: 598 RPNMDEVVRMIEEVRQSD 615
RP ++ ++E Q D
Sbjct: 305 RPTFQQICSFLQEQAQED 322
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Query: 462 KFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAGYRAP------EVIETRKH 515
+ H ++ A NVL+ I+DFGL L+ + G + P E I R +
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 196
Query: 516 SHKSDVYSFGVLLLEMLT 533
+H+SDV+S+GV + E++T
Sbjct: 197 THQSDVWSYGVTVWELMT 214
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Query: 450 RGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSA-GYRAPE 508
RG+ +IHS H ++K SN+ +N+D + I D GL + T + YRAPE
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGYVATRWYRAPE 192
Query: 509 VIETRKHSHKS-DVYSFGVLLLEMLTGKA 536
++ H +++ D++S G ++ E+LTG+
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 55/114 (48%), Gaps = 15/114 (13%)
Query: 426 HGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISD 485
H + + L+W ++ A+G+ ++ + H ++ A NVL+ I+D
Sbjct: 120 HKDNIGSQYLLNWCVQI------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITD 170
Query: 486 FGLTPLMNVPATPSRSAGYRAP------EVIETRKHSHKSDVYSFGVLLLEMLT 533
FGL L+ + G + P E I R ++H+SDV+S+GV + E++T
Sbjct: 171 FGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 224
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 55/114 (48%), Gaps = 15/114 (13%)
Query: 426 HGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISD 485
H + + L+W ++ A+G+ ++ + H ++ A NVL+ I+D
Sbjct: 110 HKDNIGSQYLLNWCVQI------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITD 160
Query: 486 FGLTPLMNVPATPSRSAGYRAP------EVIETRKHSHKSDVYSFGVLLLEMLT 533
FGL L+ + G + P E I R ++H+SDV+S+GV + E++T
Sbjct: 161 FGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 55/114 (48%), Gaps = 15/114 (13%)
Query: 426 HGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISD 485
H + + L+W ++ A+G+ ++ + H ++ A NVL+ I+D
Sbjct: 110 HKDNIGSQYLLNWCVQI------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITD 160
Query: 486 FGLTPLMNVPATPSRSAGYRAP------EVIETRKHSHKSDVYSFGVLLLEMLT 533
FGL L+ + G + P E I R ++H+SDV+S+GV + E++T
Sbjct: 161 FGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 55/114 (48%), Gaps = 15/114 (13%)
Query: 426 HGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISD 485
H + + L+W ++ A+G+ ++ + H ++ A NVL+ I+D
Sbjct: 135 HKDNIGSQYLLNWCVQI------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITD 185
Query: 486 FGLTPLMNVPATPSRSAGYRAP------EVIETRKHSHKSDVYSFGVLLLEMLT 533
FGL L+ + G + P E I R ++H+SDV+S+GV + E++T
Sbjct: 186 FGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 239
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 55/114 (48%), Gaps = 15/114 (13%)
Query: 426 HGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISD 485
H + + L+W ++ A+G+ ++ + H ++ A NVL+ I+D
Sbjct: 117 HKDNIGSQYLLNWCVQI------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITD 167
Query: 486 FGLTPLMNVPATPSRSAGYRAP------EVIETRKHSHKSDVYSFGVLLLEMLT 533
FGL L+ + G + P E I R ++H+SDV+S+GV + E++T
Sbjct: 168 FGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Query: 462 KFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAGYRAP------EVIETRKH 515
+ H ++ A NVL+ I+DFGL L+ + G + P E I R +
Sbjct: 139 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 198
Query: 516 SHKSDVYSFGVLLLEMLT 533
+H+SDV+S+GV + E++T
Sbjct: 199 THQSDVWSYGVTVWELMT 216
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Query: 462 KFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAGYRAP------EVIETRKH 515
+ H ++ A NVL+ I+DFGL L+ + G + P E I R +
Sbjct: 171 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 230
Query: 516 SHKSDVYSFGVLLLEMLT 533
+H+SDV+S+GV + E++T
Sbjct: 231 THQSDVWSYGVTVWELMT 248
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 55/114 (48%), Gaps = 15/114 (13%)
Query: 426 HGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISD 485
H + + L+W ++ A+G+ ++ + H ++ A NVL+ I+D
Sbjct: 111 HKDNIGSQYLLNWCVQI------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITD 161
Query: 486 FGLTPLMNVPATPSRSAGYRAP------EVIETRKHSHKSDVYSFGVLLLEMLT 533
FGL L+ + G + P E I R ++H+SDV+S+GV + E++T
Sbjct: 162 FGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 82/183 (44%), Gaps = 30/183 (16%)
Query: 379 DFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDW 438
+ E+++ I+ +V H NV+ L Y ++ + +L+ + + G L L A + L
Sbjct: 61 EIEREVSILRQVLHH-NVITLHDVYENRTDVVLILELVSGGELFDFL-----AQKESLSE 114
Query: 439 ETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCIS-------DFGL--- 488
E + GV ++H+ K H ++K N+++ LD I DFGL
Sbjct: 115 EEATSFIKQILDGVNYLHT---KKIAHFDLKPENIML---LDKNIPIPHIKLIDFGLAHE 168
Query: 489 ----TPLMNVPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRD 544
N+ TP + APE++ ++D++S GV+ +L+G +P T+
Sbjct: 169 IEDGVEFKNIFGTPE----FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ 224
Query: 545 DMV 547
+ +
Sbjct: 225 ETL 227
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Query: 462 KFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAGYRAP------EVIETRKH 515
+ H ++ A NVL+ I+DFGL L+ + G + P E I R +
Sbjct: 140 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 199
Query: 516 SHKSDVYSFGVLLLEMLT 533
+H+SDV+S+GV + E++T
Sbjct: 200 THQSDVWSYGVTVWELMT 217
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Query: 462 KFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAGYRAP------EVIETRKH 515
+ H ++ A NVL+ I+DFGL L+ + G + P E I R +
Sbjct: 139 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 198
Query: 516 SHKSDVYSFGVLLLEMLT 533
+H+SDV+S+GV + E++T
Sbjct: 199 THQSDVWSYGVTVWELMT 216
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Query: 462 KFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAGYRAP------EVIETRKH 515
+ H ++ A NVL+ I+DFGL L+ + G + P E I R +
Sbjct: 144 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 203
Query: 516 SHKSDVYSFGVLLLEMLT 533
+H+SDV+S+GV + E++T
Sbjct: 204 THQSDVWSYGVTVWELMT 221
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 55/114 (48%), Gaps = 15/114 (13%)
Query: 426 HGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISD 485
H + + L+W ++ A+G+ ++ + H ++ A NVL+ I+D
Sbjct: 110 HKDNIGSQYLLNWCVQI------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITD 160
Query: 486 FGLTPLMNVPATPSRSAGYRAP------EVIETRKHSHKSDVYSFGVLLLEMLT 533
FGL L+ + G + P E I R ++H+SDV+S+GV + E++T
Sbjct: 161 FGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 55/114 (48%), Gaps = 15/114 (13%)
Query: 426 HGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISD 485
H + + L+W ++ A+G+ ++ + H ++ A NVL+ I+D
Sbjct: 114 HKDNIGSQYLLNWCVQI------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITD 164
Query: 486 FGLTPLMNVPATPSRSAGYRAP------EVIETRKHSHKSDVYSFGVLLLEMLT 533
FGL L+ + G + P E I R ++H+SDV+S+GV + E++T
Sbjct: 165 FGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Query: 462 KFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAGYRAP------EVIETRKH 515
+ H ++ A NVL+ I+DFGL L+ + G + P E I R +
Sbjct: 138 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 197
Query: 516 SHKSDVYSFGVLLLEMLT 533
+H+SDV+S+GV + E++T
Sbjct: 198 THQSDVWSYGVTVWELMT 215
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Query: 462 KFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAGYRAP------EVIETRKH 515
+ H ++ A NVL+ I+DFGL L+ + G + P E I R +
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 196
Query: 516 SHKSDVYSFGVLLLEMLT 533
+H+SDV+S+GV + E++T
Sbjct: 197 THQSDVWSYGVTVWELMT 214
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Query: 462 KFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAGYRAP------EVIETRKH 515
+ H ++ A NVL+ I+DFGL L+ + G + P E I R +
Sbjct: 140 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 199
Query: 516 SHKSDVYSFGVLLLEMLT 533
+H+SDV+S+GV + E++T
Sbjct: 200 THQSDVWSYGVTVWELMT 217
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Query: 462 KFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAGYRAP------EVIETRKH 515
+ H ++ A NVL+ I+DFGL L+ + G + P E I R +
Sbjct: 140 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 199
Query: 516 SHKSDVYSFGVLLLEMLT 533
+H+SDV+S+GV + E++T
Sbjct: 200 THQSDVWSYGVTVWELMT 217
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Query: 462 KFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAGYRAP------EVIETRKH 515
+ H ++ A NVL+ I+DFGL L+ + G + P E I R +
Sbjct: 144 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 203
Query: 516 SHKSDVYSFGVLLLEMLT 533
+H+SDV+S+GV + E++T
Sbjct: 204 THQSDVWSYGVTVWELMT 221
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 48/94 (51%), Gaps = 7/94 (7%)
Query: 451 GVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR----SAGYRA 506
G+ H+H + ++K NVL++ D + ISD GL + T ++ + G+ A
Sbjct: 301 GLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMA 357
Query: 507 PEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQS 540
PE++ ++ D ++ GV L EM+ + P ++
Sbjct: 358 PELLLGEEYDFSVDYFALGVTLYEMIAARGPFRA 391
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Query: 462 KFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAGYRAP------EVIETRKH 515
+ H ++ A NVL+ I+DFGL L+ + G + P E I R +
Sbjct: 134 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 193
Query: 516 SHKSDVYSFGVLLLEMLT 533
+H+SDV+S+GV + E++T
Sbjct: 194 THQSDVWSYGVTVWELMT 211
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Query: 462 KFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAGYRAP------EVIETRKH 515
+ H ++ A NVL+ I+DFGL L+ + G + P E I R +
Sbjct: 140 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 199
Query: 516 SHKSDVYSFGVLLLEMLT 533
+H+SDV+S+GV + E++T
Sbjct: 200 THQSDVWSYGVTVWELMT 217
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 117/287 (40%), Gaps = 45/287 (15%)
Query: 346 LGKGSYGTAYKAVL-----EESTTXXXXXXXXXXXXXRD---FEQQMEIVGRVGQHPNVV 397
LG+GS+G Y+ V +E T R+ F + ++ H +VV
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH-HVV 78
Query: 398 PLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGR-----TPLDWETRVKILLGTARGV 452
L L++ + G L + L R P +++ A G+
Sbjct: 79 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 138
Query: 453 AHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG--------Y 504
A++++ KF H ++ A N + +D I DFG+T ++ T G +
Sbjct: 139 AYLNA---NKFVHRDLAARNCXVAEDFTVKIGDFGMT--RDIYETDYYRKGGKGLLPVRW 193
Query: 505 RAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTA 563
+PE ++ + SDV+SFGV+L E+ T + P Q + + V+R
Sbjct: 194 MSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN----------EQVLRFVMEG 243
Query: 564 EVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEE 610
+ D + N + +++++++ C P MRP+ E++ I+E
Sbjct: 244 GLLD----KPDNCPDMLLELMRM---CWQYNPKMRPSFLEIISSIKE 283
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Query: 462 KFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAGYRAP------EVIETRKH 515
+ H ++ A NVL+ I+DFGL L+ + G + P E I R +
Sbjct: 143 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 202
Query: 516 SHKSDVYSFGVLLLEMLT 533
+H+SDV+S+GV + E++T
Sbjct: 203 THQSDVWSYGVTVWELMT 220
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 48/94 (51%), Gaps = 7/94 (7%)
Query: 451 GVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR----SAGYRA 506
G+ H+H + ++K NVL++ D + ISD GL + T ++ + G+ A
Sbjct: 301 GLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMA 357
Query: 507 PEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQS 540
PE++ ++ D ++ GV L EM+ + P ++
Sbjct: 358 PELLLGEEYDFSVDYFALGVTLYEMIAARGPFRA 391
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 55/114 (48%), Gaps = 15/114 (13%)
Query: 426 HGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISD 485
H + + L+W ++ A+G+ ++ + H ++ A NVL+ I+D
Sbjct: 104 HKDNIGSQYLLNWCVQI------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITD 154
Query: 486 FGLTPLMNVPATPSRSAGYRAP------EVIETRKHSHKSDVYSFGVLLLEMLT 533
FGL L+ + G + P E I R ++H+SDV+S+GV + E++T
Sbjct: 155 FGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 208
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 48/94 (51%), Gaps = 7/94 (7%)
Query: 451 GVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR----SAGYRA 506
G+ H+H + ++K NVL++ D + ISD GL + T ++ + G+ A
Sbjct: 301 GLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMA 357
Query: 507 PEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQS 540
PE++ ++ D ++ GV L EM+ + P ++
Sbjct: 358 PELLLGEEYDFSVDYFALGVTLYEMIAARGPFRA 391
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 105/278 (37%), Gaps = 50/278 (17%)
Query: 288 NGSNGVSKGKASSGGRSEK-------------PKEEFGSGVQEPEKNKLVFFEGCSYNFD 334
GS VS G+A S K P+ E GV EK K V Y +
Sbjct: 14 QGSGSVSSGQAHSLASLAKTWSSGSAKLQRLGPETEDNEGVLLTEKLKPV-----DYEYR 68
Query: 335 LEDLLRASAEVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHP 394
E LG+GS+G ++ +++ T E+ + G P
Sbjct: 69 EEVHWMTHQPRLGRGSFGEVHR--MKDKQTGFQCAVKKVRLEVFRVEELVACAGL--SSP 124
Query: 395 NVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTA-RGVA 453
+VPL + + GSL L+ + G P E R LG A G+
Sbjct: 125 RIVPLYGAVREGPWVNIFMELLEGGSLGQLI---KQMGCLP---EDRALYYLGQALEGLE 178
Query: 454 HIHSMGGPKFTHGNIKASNVLINQDLD-GCISDFGLTPLMN-------------VPATPS 499
++H+ + HG++KA NVL++ D + DFG + +P T +
Sbjct: 179 YLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTET 235
Query: 500 RSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAP 537
+ APEV+ + K D++S ++L ML G P
Sbjct: 236 ----HMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 269
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 48/94 (51%), Gaps = 7/94 (7%)
Query: 451 GVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR----SAGYRA 506
G+ H+H + ++K NVL++ D + ISD GL + T ++ + G+ A
Sbjct: 301 GLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMA 357
Query: 507 PEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQS 540
PE++ ++ D ++ GV L EM+ + P ++
Sbjct: 358 PELLLGEEYDFSVDYFALGVTLYEMIAARGPFRA 391
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 50/100 (50%), Gaps = 11/100 (11%)
Query: 444 ILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPS---- 499
L RG+ +IHS H ++K SN+L+N D I DFGL + + +
Sbjct: 133 FLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 189
Query: 500 ---RSAGYRAPEVIETRKHSHKS-DVYSFGVLLLEMLTGK 535
+ YRAPE++ K KS D++S G +L EML+ +
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 11/99 (11%)
Query: 445 LLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPS----- 499
L RG+ +IHS H ++K SN+L+N D I DFGL + + +
Sbjct: 130 LYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTE 186
Query: 500 --RSAGYRAPEVIETRKHSHKS-DVYSFGVLLLEMLTGK 535
+ YRAPE++ K KS D++S G +L EML+ +
Sbjct: 187 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 11/99 (11%)
Query: 445 LLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPS----- 499
L RG+ +IHS H ++K SN+L+N D I DFGL + + +
Sbjct: 132 LYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 188
Query: 500 --RSAGYRAPEVIETRKHSHKS-DVYSFGVLLLEMLTGK 535
+ YRAPE++ K KS D++S G +L EML+ +
Sbjct: 189 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 11/99 (11%)
Query: 445 LLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPS----- 499
L RG+ +IHS H ++K SN+L+N D I DFGL + + +
Sbjct: 128 LYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 184
Query: 500 --RSAGYRAPEVIETRKHSHKS-DVYSFGVLLLEMLTGK 535
+ YRAPE++ K KS D++S G +L EML+ +
Sbjct: 185 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 11/99 (11%)
Query: 445 LLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPS----- 499
L RG+ +IHS H ++K SN+L+N D I DFGL + + +
Sbjct: 130 LYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 186
Query: 500 --RSAGYRAPEVIETRKHSHKS-DVYSFGVLLLEMLTGK 535
+ YRAPE++ K KS D++S G +L EML+ +
Sbjct: 187 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 50/103 (48%), Gaps = 19/103 (18%)
Query: 445 LLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR---- 500
L RG+ +IHS H ++K SN+L+N D I DFGL + A P
Sbjct: 130 LYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKIXDFGLARV----ADPDHDHTG 182
Query: 501 -------SAGYRAPEVIETRKHSHKS-DVYSFGVLLLEMLTGK 535
+ YRAPE++ K KS D++S G +L EML+ +
Sbjct: 183 FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 11/99 (11%)
Query: 445 LLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPS----- 499
L RG+ +IHS H ++K SN+L+N D I DFGL + + +
Sbjct: 128 LYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 184
Query: 500 --RSAGYRAPEVIETRKHSHKS-DVYSFGVLLLEMLTGK 535
+ YRAPE++ K KS D++S G +L EML+ +
Sbjct: 185 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 11/99 (11%)
Query: 445 LLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPS----- 499
L RG+ +IHS H ++K SN+L+N D I DFGL + + +
Sbjct: 130 LYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTE 186
Query: 500 --RSAGYRAPEVIETRKHSHKS-DVYSFGVLLLEMLTGK 535
+ YRAPE++ K KS D++S G +L EML+ +
Sbjct: 187 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 11/99 (11%)
Query: 445 LLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPS----- 499
L RG+ +IHS H ++K SN+L+N D I DFGL + + +
Sbjct: 132 LYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 188
Query: 500 --RSAGYRAPEVIETRKHSHKS-DVYSFGVLLLEMLTGK 535
+ YRAPE++ K KS D++S G +L EML+ +
Sbjct: 189 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 50/100 (50%), Gaps = 11/100 (11%)
Query: 444 ILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPS---- 499
L RG+ +IHS H ++K SN+L+N D I DFGL + + +
Sbjct: 134 FLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 190
Query: 500 ---RSAGYRAPEVIETRKHSHKS-DVYSFGVLLLEMLTGK 535
+ YRAPE++ K KS D++S G +L EML+ +
Sbjct: 191 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 50/100 (50%), Gaps = 11/100 (11%)
Query: 444 ILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPS---- 499
L RG+ +IHS H ++K SN+L+N D I DFGL + + +
Sbjct: 135 FLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 191
Query: 500 ---RSAGYRAPEVIETRKHSHKS-DVYSFGVLLLEMLTGK 535
+ YRAPE++ K KS D++S G +L EML+ +
Sbjct: 192 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 50/100 (50%), Gaps = 11/100 (11%)
Query: 444 ILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPS---- 499
L RG+ +IHS H ++K SN+L+N D I DFGL + + +
Sbjct: 126 FLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 182
Query: 500 ---RSAGYRAPEVIETRKHSHKS-DVYSFGVLLLEMLTGK 535
+ YRAPE++ K KS D++S G +L EML+ +
Sbjct: 183 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 50/100 (50%), Gaps = 11/100 (11%)
Query: 444 ILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPS---- 499
L RG+ +IHS H ++K SN+L+N D I DFGL + + +
Sbjct: 133 FLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 189
Query: 500 ---RSAGYRAPEVIETRKHSHKS-DVYSFGVLLLEMLTGK 535
+ YRAPE++ K KS D++S G +L EML+ +
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 11/99 (11%)
Query: 445 LLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPS----- 499
L RG+ +IHS H ++K SN+L+N D I DFGL + + +
Sbjct: 134 LYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXE 190
Query: 500 --RSAGYRAPEVIETRKHSHKS-DVYSFGVLLLEMLTGK 535
+ YRAPE++ K KS D++S G +L EML+ +
Sbjct: 191 XVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 11/99 (11%)
Query: 445 LLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPS----- 499
L RG+ +IHS H ++K SN+L+N D I DFGL + + +
Sbjct: 135 LYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXE 191
Query: 500 --RSAGYRAPEVIETRKHSHKS-DVYSFGVLLLEMLTGK 535
+ YRAPE++ K KS D++S G +L EML+ +
Sbjct: 192 XVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 50/100 (50%), Gaps = 11/100 (11%)
Query: 444 ILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPS---- 499
L RG+ +IHS H ++K SN+L+N D I DFGL + + +
Sbjct: 133 FLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 189
Query: 500 ---RSAGYRAPEVIETRKHSHKS-DVYSFGVLLLEMLTGK 535
+ YRAPE++ K KS D++S G +L EML+ +
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 11/99 (11%)
Query: 445 LLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPS----- 499
L RG+ +IHS H ++K SN+L+N D I DFGL + + +
Sbjct: 138 LYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 194
Query: 500 --RSAGYRAPEVIETRKHSHKS-DVYSFGVLLLEMLTGK 535
+ YRAPE++ K KS D++S G +L EML+ +
Sbjct: 195 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 11/99 (11%)
Query: 445 LLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPS----- 499
L RG+ +IHS H ++K SN+L+N D I DFGL + + +
Sbjct: 130 LYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 186
Query: 500 --RSAGYRAPEVIETRKHSHKS-DVYSFGVLLLEMLTGK 535
+ YRAPE++ K KS D++S G +L EML+ +
Sbjct: 187 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 11/99 (11%)
Query: 445 LLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPS----- 499
L RG+ +IHS H ++K SN+L+N D I DFGL + + +
Sbjct: 134 LYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTE 190
Query: 500 --RSAGYRAPEVIETRKHSHKS-DVYSFGVLLLEMLTGK 535
+ YRAPE++ K KS D++S G +L EML+ +
Sbjct: 191 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 11/99 (11%)
Query: 445 LLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPS----- 499
L RG+ +IHS H ++K SN+L+N D I DFGL + + +
Sbjct: 134 LYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTE 190
Query: 500 --RSAGYRAPEVIETRKHSHKS-DVYSFGVLLLEMLTGK 535
+ YRAPE++ K KS D++S G +L EML+ +
Sbjct: 191 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 11/99 (11%)
Query: 445 LLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPS----- 499
L RG+ +IHS H ++K SN+L+N D I DFGL + + +
Sbjct: 150 LYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 206
Query: 500 --RSAGYRAPEVIETRKHSHKS-DVYSFGVLLLEMLTGK 535
+ YRAPE++ K KS D++S G +L EML+ +
Sbjct: 207 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 69/167 (41%), Gaps = 21/167 (12%)
Query: 392 QHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKIL-LGTAR 450
+HP + L+ + + D V +Y G L L R E R +
Sbjct: 209 RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFS------EDRARFYGAEIVS 262
Query: 451 GVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGL--------TPLMNVPATPSRSA 502
+ ++HS + ++K N+++++D I+DFGL + TP
Sbjct: 263 ALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPE--- 317
Query: 503 GYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDL 549
Y APEV+E + D + GV++ EM+ G+ P + + + +L
Sbjct: 318 -YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFEL 363
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 50/100 (50%), Gaps = 11/100 (11%)
Query: 444 ILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPS---- 499
L RG+ +IHS H ++K SN+L+N D I DFGL + + +
Sbjct: 149 FLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLT 205
Query: 500 ---RSAGYRAPEVIETRKHSHKS-DVYSFGVLLLEMLTGK 535
+ YRAPE++ K KS D++S G +L EML+ +
Sbjct: 206 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 69/167 (41%), Gaps = 21/167 (12%)
Query: 392 QHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKIL-LGTAR 450
+HP + L+ + + D V +Y G L L R E R +
Sbjct: 206 RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFS------EDRARFYGAEIVS 259
Query: 451 GVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGL--------TPLMNVPATPSRSA 502
+ ++HS + ++K N+++++D I+DFGL + TP
Sbjct: 260 ALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPE--- 314
Query: 503 GYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDL 549
Y APEV+E + D + GV++ EM+ G+ P + + + +L
Sbjct: 315 -YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFEL 360
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 9/105 (8%)
Query: 443 KILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSA 502
KI + + + H+HS H ++K SNVLIN + DFG++ + + A
Sbjct: 157 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDA 214
Query: 503 G---YRAPEVI----ETRKHSHKSDVYSFGVLLLEMLTGKAPLQS 540
G Y APE I + +S KSD++S G+ ++E+ + P S
Sbjct: 215 GCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDS 259
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 70/169 (41%), Gaps = 16/169 (9%)
Query: 382 QQMEIVGRVGQHPNVVPL----RAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLD 437
+++E+ R Q P++V + Y + L+V + G L + + G
Sbjct: 63 REVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDR---GDQAFT 119
Query: 438 WETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCI---SDFGL---TPL 491
+I+ + ++HS+ H ++K N+L I +DFG T
Sbjct: 120 EREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS 176
Query: 492 MNVPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQS 540
N TP + Y APEV+ K+ D++S GV++ +L G P S
Sbjct: 177 HNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS 225
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 61/129 (47%), Gaps = 18/129 (13%)
Query: 439 ETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLT--PLMNVP- 495
ETRV + VA++HS G + H ++K N+L ++ + DFGL P N
Sbjct: 109 ETRV-VFRQIVSAVAYVHSQG---YAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDY 164
Query: 496 --ATPSRSAGYRAPEVIETRKH-SHKSDVYSFGVLLLEMLTGKAP--------LQSPTRD 544
T S Y APE+I+ + + ++DV+S G+LL ++ G P L
Sbjct: 165 HLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMR 224
Query: 545 DMVDLPRWV 553
D+P+W+
Sbjct: 225 GKYDVPKWL 233
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 70/169 (41%), Gaps = 16/169 (9%)
Query: 382 QQMEIVGRVGQHPNVVPL----RAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLD 437
+++E+ R Q P++V + Y + L+V + G L + + G
Sbjct: 64 REVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDR---GDQAFT 120
Query: 438 WETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCI---SDFGL---TPL 491
+I+ + ++HS+ H ++K N+L I +DFG T
Sbjct: 121 EREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS 177
Query: 492 MNVPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQS 540
N TP + Y APEV+ K+ D++S GV++ +L G P S
Sbjct: 178 HNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS 226
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 70/169 (41%), Gaps = 16/169 (9%)
Query: 382 QQMEIVGRVGQHPNVVPL----RAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLD 437
+++E+ R Q P++V + Y + L+V + G L + + G
Sbjct: 65 REVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDR---GDQAFT 121
Query: 438 WETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCI---SDFGL---TPL 491
+I+ + ++HS+ H ++K N+L I +DFG T
Sbjct: 122 EREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS 178
Query: 492 MNVPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQS 540
N TP + Y APEV+ K+ D++S GV++ +L G P S
Sbjct: 179 HNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS 227
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 70/169 (41%), Gaps = 16/169 (9%)
Query: 382 QQMEIVGRVGQHPNVVPL----RAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLD 437
+++E+ R Q P++V + Y + L+V + G L + + G
Sbjct: 58 REVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDR---GDQAFT 114
Query: 438 WETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCI---SDFGL---TPL 491
+I+ + ++HS+ H ++K N+L I +DFG T
Sbjct: 115 EREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS 171
Query: 492 MNVPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQS 540
N TP + Y APEV+ K+ D++S GV++ +L G P S
Sbjct: 172 HNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS 220
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 70/169 (41%), Gaps = 16/169 (9%)
Query: 382 QQMEIVGRVGQHPNVVPL----RAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLD 437
+++E+ R Q P++V + Y + L+V + G L + + G
Sbjct: 57 REVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDR---GDQAFT 113
Query: 438 WETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCI---SDFGL---TPL 491
+I+ + ++HS+ H ++K N+L I +DFG T
Sbjct: 114 EREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS 170
Query: 492 MNVPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQS 540
N TP + Y APEV+ K+ D++S GV++ +L G P S
Sbjct: 171 HNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS 219
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 70/169 (41%), Gaps = 16/169 (9%)
Query: 382 QQMEIVGRVGQHPNVVPL----RAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLD 437
+++E+ R Q P++V + Y + L+V + G L + + G
Sbjct: 73 REVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDR---GDQAFT 129
Query: 438 WETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCI---SDFGL---TPL 491
+I+ + ++HS+ H ++K N+L I +DFG T
Sbjct: 130 EREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS 186
Query: 492 MNVPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQS 540
N TP + Y APEV+ K+ D++S GV++ +L G P S
Sbjct: 187 HNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS 235
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 70/169 (41%), Gaps = 16/169 (9%)
Query: 382 QQMEIVGRVGQHPNVVPL----RAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLD 437
+++E+ R Q P++V + Y + L+V + G L + + G
Sbjct: 103 REVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDR---GDQAFT 159
Query: 438 WETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCI---SDFGL---TPL 491
+I+ + ++HS+ H ++K N+L I +DFG T
Sbjct: 160 EREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS 216
Query: 492 MNVPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQS 540
N TP + Y APEV+ K+ D++S GV++ +L G P S
Sbjct: 217 HNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS 265
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 70/169 (41%), Gaps = 16/169 (9%)
Query: 382 QQMEIVGRVGQHPNVVPL----RAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLD 437
+++E+ R Q P++V + Y + L+V + G L + + G
Sbjct: 59 REVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDR---GDQAFT 115
Query: 438 WETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCI---SDFGL---TPL 491
+I+ + ++HS+ H ++K N+L I +DFG T
Sbjct: 116 EREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS 172
Query: 492 MNVPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQS 540
N TP + Y APEV+ K+ D++S GV++ +L G P S
Sbjct: 173 HNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS 221
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 50/100 (50%), Gaps = 11/100 (11%)
Query: 444 ILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPS---- 499
L RG+ +IHS H ++K SN+L+N D I DFGL + + +
Sbjct: 131 FLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLT 187
Query: 500 ---RSAGYRAPEVIETRKHSHKS-DVYSFGVLLLEMLTGK 535
+ YRAPE++ K KS D++S G +L EML+ +
Sbjct: 188 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 89/217 (41%), Gaps = 28/217 (12%)
Query: 336 EDLLRASAEVLGKGSYGTAYKAV---------LEESTTXXXXXXXXXXXXXRDFEQQMEI 386
EDL+ E LG+G++ +K V L E+ F + +
Sbjct: 8 EDLI--FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASM 65
Query: 387 VGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILL 446
+ ++ H ++V + DE +LV ++ GSL T L N+ + W+ V L
Sbjct: 66 MSKLS-HKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNC--INILWKLEVAKQL 122
Query: 447 GTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDG--------CISDFGLTPLMNVPATP 498
A +H + HGN+ A N+L+ ++ D +SD G++ +
Sbjct: 123 AWA-----MHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDIL 177
Query: 499 SRSAGYRAPEVIETRKHSH-KSDVYSFGVLLLEMLTG 534
+ PE IE K+ + +D +SFG L E+ +G
Sbjct: 178 QERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 18/103 (17%)
Query: 445 LLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR---- 500
+ T R V +H G H ++K SN+LIN + D + DFGL +++ A +
Sbjct: 118 IYQTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTG 174
Query: 501 ----------SAGYRAPEVIETR-KHSHKSDVYSFGVLLLEML 532
+ YRAPEV+ T K+S DV+S G +L E+
Sbjct: 175 QQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 18/103 (17%)
Query: 445 LLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR---- 500
+ T R V +H G H ++K SN+LIN + D + DFGL +++ A +
Sbjct: 118 IYQTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTG 174
Query: 501 ----------SAGYRAPEVIETR-KHSHKSDVYSFGVLLLEML 532
+ YRAPEV+ T K+S DV+S G +L E+
Sbjct: 175 QQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 18/103 (17%)
Query: 445 LLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR---- 500
+ T R V +H G H ++K SN+LIN + D + DFGL +++ A +
Sbjct: 118 IYQTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTG 174
Query: 501 ----------SAGYRAPEVIETR-KHSHKSDVYSFGVLLLEML 532
+ YRAPEV+ T K+S DV+S G +L E+
Sbjct: 175 QQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 70/169 (41%), Gaps = 16/169 (9%)
Query: 382 QQMEIVGRVGQHPNVVPL----RAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLD 437
+++E+ R Q P++V + Y + L+V + G L + + G
Sbjct: 109 REVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDR---GDQAFT 165
Query: 438 WETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCI---SDFGL---TPL 491
+I+ + ++HS+ H ++K N+L I +DFG T
Sbjct: 166 EREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS 222
Query: 492 MNVPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQS 540
N TP + Y APEV+ K+ D++S GV++ +L G P S
Sbjct: 223 HNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS 271
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 70/169 (41%), Gaps = 16/169 (9%)
Query: 382 QQMEIVGRVGQHPNVVPL----RAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLD 437
+++E+ R Q P++V + Y + L+V + G L + + G
Sbjct: 59 REVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDR---GDQAFT 115
Query: 438 WETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCI---SDFGL---TPL 491
+I+ + ++HS+ H ++K N+L I +DFG T
Sbjct: 116 EREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS 172
Query: 492 MNVPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQS 540
N TP + Y APEV+ K+ D++S GV++ +L G P S
Sbjct: 173 HNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS 221
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 70/163 (42%), Gaps = 13/163 (7%)
Query: 392 QHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKIL-LGTAR 450
+HP + L+ + + D V +Y G L L R E R +
Sbjct: 66 RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFS------EDRARFYGAEIVS 119
Query: 451 GVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPL-MNVPATPSRSAG---YRA 506
+ ++HS + ++K N+++++D I+DFGL + AT G Y A
Sbjct: 120 ALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLA 177
Query: 507 PEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDL 549
PEV+E + D + GV++ EM+ G+ P + + + +L
Sbjct: 178 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFEL 220
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 9/105 (8%)
Query: 443 KILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSA 502
KI + + + H+HS H ++K SNVLIN + DFG++ + A
Sbjct: 113 KIAVSIVKALEHLHS--KLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDA 170
Query: 503 G---YRAPEVI----ETRKHSHKSDVYSFGVLLLEMLTGKAPLQS 540
G Y APE I + +S KSD++S G+ ++E+ + P S
Sbjct: 171 GCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDS 215
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 92/220 (41%), Gaps = 18/220 (8%)
Query: 335 LEDLLRASAEVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHP 394
L D +E LG+G+ Y+ + + + ++ ++ R+ HP
Sbjct: 51 LSDFFEVESE-LGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLS-HP 108
Query: 395 NVVPLRAYYYSKDEKLLVYDYFASGSL-STLLHGNRGAGRTPLDWETRVKILLGTARGVA 453
N++ L+ + + E LV + G L ++ + R D VK +L VA
Sbjct: 109 NIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAAD---AVKQIL---EAVA 162
Query: 454 HIHSMGGPKFTHGNIKASNVLINQ---DLDGCISDFGLTPLMN---VPATPSRSAGYRAP 507
++H G H ++K N+L D I+DFGL+ ++ + T + GY AP
Sbjct: 163 YLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAP 219
Query: 508 EVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMV 547
E++ + + D++S G++ +L G P D +
Sbjct: 220 EILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFM 259
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 70/163 (42%), Gaps = 13/163 (7%)
Query: 392 QHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKIL-LGTAR 450
+HP + L+ + + D V +Y G L L R E R +
Sbjct: 67 RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFS------EDRARFYGAEIVS 120
Query: 451 GVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPL-MNVPATPSRSAG---YRA 506
+ ++HS + ++K N+++++D I+DFGL + AT G Y A
Sbjct: 121 ALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLA 178
Query: 507 PEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDL 549
PEV+E + D + GV++ EM+ G+ P + + + +L
Sbjct: 179 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFEL 221
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 105/277 (37%), Gaps = 50/277 (18%)
Query: 289 GSNGVSKGKASSGGRSEK-------------PKEEFGSGVQEPEKNKLVFFEGCSYNFDL 335
GS VS G+A S K P+ E GV EK K V Y +
Sbjct: 1 GSGSVSSGQAHSLASLAKTWSSGSAKLQRLGPETEDNEGVLLTEKLKPV-----DYEYRE 55
Query: 336 EDLLRASAEVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPN 395
E +G+GS+G ++ +++ T E+ + G P
Sbjct: 56 EVHWMTHQPRVGRGSFGEVHR--MKDKQTGFQCAVKKVRLEVFRVEELVACAGL--SSPR 111
Query: 396 VVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTA-RGVAH 454
+VPL + + GSL L+ + G P E R LG A G+ +
Sbjct: 112 IVPLYGAVREGPWVNIFMELLEGGSLGQLI---KQMGCLP---EDRALYYLGQALEGLEY 165
Query: 455 IHSMGGPKFTHGNIKASNVLINQDLD-GCISDFGLTPLMN-------------VPATPSR 500
+H+ + HG++KA NVL++ D + DFG + +P T +
Sbjct: 166 LHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTET- 221
Query: 501 SAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAP 537
+ APEV+ + K D++S ++L ML G P
Sbjct: 222 ---HMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 255
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 70/163 (42%), Gaps = 13/163 (7%)
Query: 392 QHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKIL-LGTAR 450
+HP + L+ + + D V +Y G L L R E R +
Sbjct: 68 RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFS------EDRARFYGAEIVS 121
Query: 451 GVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPL-MNVPATPSRSAG---YRA 506
+ ++HS + ++K N+++++D I+DFGL + AT G Y A
Sbjct: 122 ALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLA 179
Query: 507 PEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDL 549
PEV+E + D + GV++ EM+ G+ P + + + +L
Sbjct: 180 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFEL 222
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 77/169 (45%), Gaps = 19/169 (11%)
Query: 379 DFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDW 438
+ E ++EI+ ++ HP ++ ++ ++ ++D +V + G L + GN+
Sbjct: 200 NVETEIEILKKLN-HPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKL 257
Query: 439 ETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGC---ISDFGLTPLMNVP 495
+L V ++H G H ++K NVL++ + C I+DFG + ++
Sbjct: 258 YFYQMLL-----AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 309
Query: 496 ATPSRSAG---YRAPEV---IETRKHSHKSDVYSFGVLLLEMLTGKAPL 538
+ G Y APEV + T ++ D +S GV+L L+G P
Sbjct: 310 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 358
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 78/167 (46%), Gaps = 19/167 (11%)
Query: 381 EQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWET 440
E ++EI+ ++ HP ++ ++ ++ ++D +V + G L + GN+
Sbjct: 188 ETEIEILKKLN-HPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYF 245
Query: 441 RVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGC---ISDFGLTPLM---NV 494
+L V ++H G H ++K NVL++ + C I+DFG + ++ ++
Sbjct: 246 YQMLL-----AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL 297
Query: 495 PATPSRSAGYRAPEV---IETRKHSHKSDVYSFGVLLLEMLTGKAPL 538
T + Y APEV + T ++ D +S GV+L L+G P
Sbjct: 298 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 344
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 77/169 (45%), Gaps = 19/169 (11%)
Query: 379 DFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDW 438
+ E ++EI+ ++ HP ++ ++ ++ ++D +V + G L + GN+
Sbjct: 61 NVETEIEILKKLN-HPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKL 118
Query: 439 ETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGC---ISDFGLTPLMNVP 495
+L V ++H G H ++K NVL++ + C I+DFG + ++
Sbjct: 119 YFYQMLL-----AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 170
Query: 496 ATPSRSAG---YRAPEV---IETRKHSHKSDVYSFGVLLLEMLTGKAPL 538
+ G Y APEV + T ++ D +S GV+L L+G P
Sbjct: 171 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 219
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 79/169 (46%), Gaps = 19/169 (11%)
Query: 379 DFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDW 438
+ E ++EI+ ++ HP ++ ++ ++ ++D +V + G L + GN+
Sbjct: 61 NVETEIEILKKLN-HPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKL 118
Query: 439 ETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGC---ISDFGLTPLM--- 492
+L V ++H G H ++K NVL++ + C I+DFG + ++
Sbjct: 119 YFYQMLL-----AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 170
Query: 493 NVPATPSRSAGYRAPEV---IETRKHSHKSDVYSFGVLLLEMLTGKAPL 538
++ T + Y APEV + T ++ D +S GV+L L+G P
Sbjct: 171 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 219
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 75/209 (35%), Gaps = 26/209 (12%)
Query: 344 EVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVG---QHPNVVPLR 400
E LGKG++ + V + T Q++E R+ +HPN+V L
Sbjct: 37 EELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 96
Query: 401 AYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGG 460
+ LV+D G L + R + V HIH
Sbjct: 97 DSISEEGFHYLVFDLVTGGELFEDI-----VAREYYSEADASHCIHQILESVNHIHQH-- 149
Query: 461 PKFTHGNIKASNVLINQDLDGC---ISDFGLT--------PLMNVPATPSRSAGYRAPEV 509
H ++K N+L+ G ++DFGL TP GY +PEV
Sbjct: 150 -DIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTP----GYLSPEV 204
Query: 510 IETRKHSHKSDVYSFGVLLLEMLTGKAPL 538
+ + D+++ GV+L +L G P
Sbjct: 205 LRKDPYGKPVDIWACGVILYILLVGYPPF 233
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 79/169 (46%), Gaps = 19/169 (11%)
Query: 379 DFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDW 438
+ E ++EI+ ++ HP ++ ++ ++ ++D +V + G L + GN+
Sbjct: 60 NVETEIEILKKLN-HPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKL 117
Query: 439 ETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGC---ISDFGLTPLM--- 492
+L V ++H G H ++K NVL++ + C I+DFG + ++
Sbjct: 118 YFYQMLL-----AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 169
Query: 493 NVPATPSRSAGYRAPEV---IETRKHSHKSDVYSFGVLLLEMLTGKAPL 538
++ T + Y APEV + T ++ D +S GV+L L+G P
Sbjct: 170 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 218
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 79/169 (46%), Gaps = 19/169 (11%)
Query: 379 DFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDW 438
+ E ++EI+ ++ HP ++ ++ ++ ++D +V + G L + GN+
Sbjct: 61 NVETEIEILKKLN-HPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKL 118
Query: 439 ETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGC---ISDFGLTPLM--- 492
+L V ++H G H ++K NVL++ + C I+DFG + ++
Sbjct: 119 YFYQMLL-----AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 170
Query: 493 NVPATPSRSAGYRAPEV---IETRKHSHKSDVYSFGVLLLEMLTGKAPL 538
++ T + Y APEV + T ++ D +S GV+L L+G P
Sbjct: 171 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 219
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 87/213 (40%), Gaps = 27/213 (12%)
Query: 344 EVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQ---QMEIVGRVGQHPNVVPLR 400
E LG G +G + + +++ ++ E+ +++I+ ++ HPNVV R
Sbjct: 21 ERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLN-HPNVVSAR 79
Query: 401 AY------YYSKDEKLLVYDYFASGSLSTLLHGNR---GAGRTPLDWETRVKILLGTARG 451
D LL +Y G L L+ G P+ +L +
Sbjct: 80 EVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIR-----TLLSDISSA 134
Query: 452 VAHIHSMGGPKFTHGNIKASNVLIN---QDLDGCISDFGLTPLMNVPATPSRSAG---YR 505
+ ++H + H ++K N+++ Q L I D G ++ + G Y
Sbjct: 135 LRYLHE---NRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYL 191
Query: 506 APEVIETRKHSHKSDVYSFGVLLLEMLTGKAPL 538
APE++E +K++ D +SFG L E +TG P
Sbjct: 192 APELLEQKKYTVTVDYWSFGTLAFECITGFRPF 224
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 87/213 (40%), Gaps = 27/213 (12%)
Query: 344 EVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQ---QMEIVGRVGQHPNVVPLR 400
E LG G +G + + +++ ++ E+ +++I+ ++ HPNVV R
Sbjct: 20 ERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLN-HPNVVSAR 78
Query: 401 AY------YYSKDEKLLVYDYFASGSLSTLLHGNR---GAGRTPLDWETRVKILLGTARG 451
D LL +Y G L L+ G P+ +L +
Sbjct: 79 EVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIR-----TLLSDISSA 133
Query: 452 VAHIHSMGGPKFTHGNIKASNVLIN---QDLDGCISDFGLTPLMNVPATPSRSAG---YR 505
+ ++H + H ++K N+++ Q L I D G ++ + G Y
Sbjct: 134 LRYLHE---NRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYL 190
Query: 506 APEVIETRKHSHKSDVYSFGVLLLEMLTGKAPL 538
APE++E +K++ D +SFG L E +TG P
Sbjct: 191 APELLEQKKYTVTVDYWSFGTLAFECITGFRPF 223
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 77/169 (45%), Gaps = 19/169 (11%)
Query: 379 DFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDW 438
+ E ++EI+ ++ HP ++ ++ ++ ++D +V + G L + GN+
Sbjct: 67 NVETEIEILKKLN-HPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKL 124
Query: 439 ETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGC---ISDFGLTPLMNVP 495
+L V ++H G H ++K NVL++ + C I+DFG + ++
Sbjct: 125 YFYQMLL-----AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 176
Query: 496 ATPSRSAG---YRAPEV---IETRKHSHKSDVYSFGVLLLEMLTGKAPL 538
+ G Y APEV + T ++ D +S GV+L L+G P
Sbjct: 177 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 225
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 96/246 (39%), Gaps = 37/246 (15%)
Query: 307 PKEEFGSGVQEPEKNKLVFFEGCSYNFDLEDLLRASAEVLGKGSYGTAYKAVLEESTTXX 366
P+ E GV EK K V Y + E +G+GS+G ++ +++ T
Sbjct: 48 PETEDNEGVLLTEKLKPV-----DYEYREEVHWMTHQPRVGRGSFGEVHR--MKDKQTGF 100
Query: 367 XXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLH 426
E+ + G P +VPL + + GSL L+
Sbjct: 101 QCAVKKVRLEVFRVEELVACAGL--SSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLI- 157
Query: 427 GNRGAGRTPLDWETRVKILLGTA-RGVAHIHSMGGPKFTHGNIKASNVLINQDLD-GCIS 484
+ G P E R LG A G+ ++H+ + HG++KA NVL++ D +
Sbjct: 158 --KQMGCLP---EDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALC 209
Query: 485 DFGLTPLMN-------------VPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEM 531
DFG + +P T + + APEV+ + K D++S ++L M
Sbjct: 210 DFGHALCLQPDGLGKSLLTGDYIPGTET----HMAPEVVMGKPCDAKVDIWSSCCMMLHM 265
Query: 532 LTGKAP 537
L G P
Sbjct: 266 LNGCHP 271
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 77/176 (43%), Gaps = 24/176 (13%)
Query: 448 TARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAGYR-- 505
A+G+ + S K H ++ A N+L+++ I DFGL + R R
Sbjct: 202 VAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 258
Query: 506 ----APEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEW 561
APE I R ++ +SDV+SFGVLL E+ + A SP +D EE+
Sbjct: 259 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGA---SPYPGVKID----------EEF 305
Query: 562 TAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSE 617
+ + MR + +M Q + C P RP E+V + + Q++++
Sbjct: 306 CRRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQ 359
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 76/178 (42%), Gaps = 26/178 (14%)
Query: 448 TARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAGYR-- 505
A+G+ + S K H ++ A N+L+++ I DFGL + R R
Sbjct: 209 VAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 265
Query: 506 ----APEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREE 560
APE I R ++ +SDV+SFGVLL E+ + G +P D EE
Sbjct: 266 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID--------------EE 311
Query: 561 WTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSEN 618
+ + + MR + +M Q + C P RP E+V + + Q++++
Sbjct: 312 FCRRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQ 367
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 76/178 (42%), Gaps = 26/178 (14%)
Query: 448 TARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAGYR-- 505
A+G+ + S K H ++ A N+L+++ I DFGL + R R
Sbjct: 207 VAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 263
Query: 506 ----APEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREE 560
APE I R ++ +SDV+SFGVLL E+ + G +P D EE
Sbjct: 264 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID--------------EE 309
Query: 561 WTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSEN 618
+ + E R + + +M Q + C P RP E+V + + Q++++
Sbjct: 310 FCRRL--KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQ 365
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 94/228 (41%), Gaps = 16/228 (7%)
Query: 324 VFFEGCSYNFDLE-DLLRASAEVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQ 382
++F+G NF+++ D L E LG+G+YG K S ++ ++
Sbjct: 20 LYFQGAXENFEVKADDLEPIXE-LGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKR 78
Query: 383 ---QMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWE 439
++I R P V + + + + + SL G+T + +
Sbjct: 79 LLXDLDISXRTVDCPFTVTFYGALFREGDVWICXE-LXDTSLDKFYKQVIDKGQT-IPED 136
Query: 440 TRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPS 499
KI + + + H+HS H ++K SNVLIN DFG++ +
Sbjct: 137 ILGKIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKD 194
Query: 500 RSAG---YRAPEVI----ETRKHSHKSDVYSFGVLLLEMLTGKAPLQS 540
AG Y APE I + +S KSD++S G+ +E+ + P S
Sbjct: 195 IDAGCKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDS 242
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
Query: 462 KFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAGYRAP------EVIETRKH 515
+ H ++ A NVL+ I+DFG L+ + G + P E I R +
Sbjct: 139 RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 198
Query: 516 SHKSDVYSFGVLLLEMLT 533
+H+SDV+S+GV + E++T
Sbjct: 199 THQSDVWSYGVTVWELMT 216
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
Query: 462 KFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAGYRAP------EVIETRKH 515
+ H ++ A NVL+ I+DFG L+ + G + P E I R +
Sbjct: 139 RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 198
Query: 516 SHKSDVYSFGVLLLEMLT 533
+H+SDV+S+GV + E++T
Sbjct: 199 THQSDVWSYGVTVWELMT 216
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
Query: 462 KFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAGYRAP------EVIETRKH 515
+ H ++ A NVL+ I+DFG L+ + G + P E I R +
Sbjct: 139 RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 198
Query: 516 SHKSDVYSFGVLLLEMLT 533
+H+SDV+S+GV + E++T
Sbjct: 199 THQSDVWSYGVTVWELMT 216
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 63/138 (45%), Gaps = 26/138 (18%)
Query: 414 DYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNV 473
+Y +G+L L+H + W +IL +++IHS G H ++K N+
Sbjct: 95 EYCENGTLYDLIHSENLNQQRDEYWRLFRQIL----EALSYIHSQG---IIHRDLKPMNI 147
Query: 474 LINQDLDGCISDFGLTPLM------------NVPATPSR------SAGYRAPEVIE-TRK 514
I++ + I DFGL + N+P + +A Y A EV++ T
Sbjct: 148 FIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGH 207
Query: 515 HSHKSDVYSFGVLLLEML 532
++ K D+YS G++ EM+
Sbjct: 208 YNEKIDMYSLGIIFFEMI 225
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
Query: 462 KFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAGYRAP------EVIETRKH 515
+ H ++ A NVL+ I+DFG L+ + G + P E I R +
Sbjct: 144 RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 203
Query: 516 SHKSDVYSFGVLLLEMLT 533
+H+SDV+S+GV + E++T
Sbjct: 204 THQSDVWSYGVTVWELMT 221
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
Query: 462 KFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAGYRAP------EVIETRKH 515
+ H ++ A NVL+ I+DFG L+ + G + P E I R +
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 196
Query: 516 SHKSDVYSFGVLLLEMLT 533
+H+SDV+S+GV + E++T
Sbjct: 197 THQSDVWSYGVTVWELMT 214
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 54/114 (47%), Gaps = 15/114 (13%)
Query: 426 HGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISD 485
H + + L+W ++ A+G+ ++ + H ++ A NVL+ I+D
Sbjct: 114 HKDNIGSQYLLNWCVQI------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITD 164
Query: 486 FGLTPLMNVPATPSRSAGYRAP------EVIETRKHSHKSDVYSFGVLLLEMLT 533
FG L+ + G + P E I R ++H+SDV+S+GV + E++T
Sbjct: 165 FGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 77/173 (44%), Gaps = 14/173 (8%)
Query: 381 EQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWET 440
E ++E++ + HPN++ + + +V + G L + + G+ L
Sbjct: 68 EAEIEVLKSL-DHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKA-LSEGY 125
Query: 441 RVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGC----ISDFGLTPLMNVPA 496
+++ +A+ HS H ++K N+L QD I DFGL L
Sbjct: 126 VAELMKQMMNALAYFHSQ---HVVHKDLKPENILF-QDTSPHSPIKIIDFGLAELFKSDE 181
Query: 497 TPSRSAG---YRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDM 546
+ +AG Y APEV + R + K D++S GV++ +LTG P + +++
Sbjct: 182 HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEV 233
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 88/217 (40%), Gaps = 28/217 (12%)
Query: 336 EDLLRASAEVLGKGSYGTAYKAV---------LEESTTXXXXXXXXXXXXXRDFEQQMEI 386
EDL+ E LG+G++ +K V L E+ F + +
Sbjct: 8 EDLI--FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASM 65
Query: 387 VGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILL 446
+ ++ H ++V DE +LV ++ GSL T L N+ + W+ V L
Sbjct: 66 MSKLS-HKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNC--INILWKLEVAKQL 122
Query: 447 GTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDG--------CISDFGLTPLMNVPATP 498
A +H + HGN+ A N+L+ ++ D +SD G++ +
Sbjct: 123 AAA-----MHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDIL 177
Query: 499 SRSAGYRAPEVIETRKHSH-KSDVYSFGVLLLEMLTG 534
+ PE IE K+ + +D +SFG L E+ +G
Sbjct: 178 QERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 71/165 (43%), Gaps = 21/165 (12%)
Query: 458 MGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAGYR------APEVIE 511
+ K H ++ A N+L+++ I DFGL + R R APE I
Sbjct: 207 LASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIF 266
Query: 512 TRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELM 571
R ++ +SDV+SFGVLL E+ + A SP +D EE+ + + M
Sbjct: 267 DRVYTIQSDVWSFGVLLWEIFSLGA---SPYPGVKID----------EEFCRRLKEGTRM 313
Query: 572 RFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDS 616
R + +M Q + C P RP E+V + + Q+++
Sbjct: 314 RAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 356
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 10/102 (9%)
Query: 446 LGTARGVAHIHSMGGPKFTHGNIKASNVLIN---QDLDGCISDFGLTP--LMNVPATPSR 500
+GTA H H++ H ++K N+L +D ++DFG N TP
Sbjct: 118 IGTAIQFLHSHNIA-----HRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCY 172
Query: 501 SAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPT 542
+ Y APEV+ K+ D++S GV++ +L G P S T
Sbjct: 173 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNT 214
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 89/214 (41%), Gaps = 19/214 (8%)
Query: 345 VLGKGSYGTAYKAVL-----EESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPL 399
+LG+G +G Y+ V E+ ++ ++ + HP++V L
Sbjct: 15 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 74
Query: 400 RAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMG 459
++ ++ + + G L L N+ + + T V L + +A++ S+
Sbjct: 75 IGII-EEEPTWIIMELYPYGELGHYLERNKNSLKVL----TLVLYSLQICKAMAYLESIN 129
Query: 460 GPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN----VPATPSR-SAGYRAPEVIETRK 514
H +I N+L+ + DFGL+ + A+ +R + +PE I R+
Sbjct: 130 C---VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRR 186
Query: 515 HSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMV 547
+ SDV+ F V + E+L+ GK P D++
Sbjct: 187 FTTASDVWMFAVCMWEILSFGKQPFFWLENKDVI 220
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 10/102 (9%)
Query: 446 LGTARGVAHIHSMGGPKFTHGNIKASNVLIN---QDLDGCISDFGLTP--LMNVPATPSR 500
+GTA H H++ H ++K N+L +D ++DFG N TP
Sbjct: 137 IGTAIQFLHSHNIA-----HRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCY 191
Query: 501 SAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPT 542
+ Y APEV+ K+ D++S GV++ +L G P S T
Sbjct: 192 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNT 233
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/308 (20%), Positives = 114/308 (37%), Gaps = 54/308 (17%)
Query: 343 AEVLGKGSYG-----TAYKAVLEESTTXXXXXXXXXXXXXRDFE---QQMEIVGRVGQHP 394
+ LG G++G TAY + ++ + E +++++ +G H
Sbjct: 51 GKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHM 110
Query: 395 NVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKIL--------- 445
N+V L L++ +Y G L L R + +T I+
Sbjct: 111 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICS---KTSPAIMEDDELALDL 167
Query: 446 -------LGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN----- 493
A+G+A + S H ++ A N+L+ I DFGL +
Sbjct: 168 EDLLSFSYQVAKGMAFLASKNC---IHRDLAARNILLTHGRITKICDFGLARHIKNDSNY 224
Query: 494 -VPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPR 551
V + APE I ++ +SDV+S+G+ L E+ + G +P D
Sbjct: 225 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK----- 279
Query: 552 WVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEV 611
+++E R + E +M I C P RP ++V++IE+
Sbjct: 280 -FYKMIKEG----------FRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEK- 327
Query: 612 RQSDSENR 619
+ S+S N
Sbjct: 328 QISESTNH 335
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 103/234 (44%), Gaps = 28/234 (11%)
Query: 344 EVLGKGSYGTAYKA-------VLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNV 396
+ LG+G + T YKA ++ R ++++++ + HPN+
Sbjct: 16 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELS-HPNI 74
Query: 397 VPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVK-ILLGTARGVAHI 455
+ L + K LV+D F L ++ N TP + +K +L T +G+ ++
Sbjct: 75 IGLLDAFGHKSNISLVFD-FMETDLEVIIKDNSLV-LTP----SHIKAYMLMTLQGLEYL 128
Query: 456 HSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR----SAGYRAPEVI- 510
H H ++K +N+L++++ ++DFGL P + YRAPE++
Sbjct: 129 HQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLF 185
Query: 511 ETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSV---VREEW 561
R + D+++ G +L E+L + P P D+ L R +++ E+W
Sbjct: 186 GARMYGVGVDMWAVGCILAELLL-RVPFL-PGDSDLDQLTRIFETLGTPTEEQW 237
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/307 (20%), Positives = 115/307 (37%), Gaps = 54/307 (17%)
Query: 344 EVLGKGSYG-----TAYKAVLEESTTXXXXXXXXXXXXXRDFE---QQMEIVGRVGQHPN 395
+ LG G++G TAY + ++ + E +++++ +G H N
Sbjct: 29 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMN 88
Query: 396 VVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKIL---------- 445
+V L L++ +Y G L L R + +T I+
Sbjct: 89 IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICS---KTSPAIMEDDELALDLE 145
Query: 446 ------LGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN------ 493
A+G+A + S H ++ A N+L+ I DFGL +
Sbjct: 146 DLLSFSYQVAKGMAFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV 202
Query: 494 VPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRW 552
V + APE I ++ +SDV+S+G+ L E+ + G +P D
Sbjct: 203 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK------ 256
Query: 553 VQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVR 612
+++E + R + E +M I C P RP ++V++IE+ +
Sbjct: 257 FYKMIKEGF----------RMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEK-Q 305
Query: 613 QSDSENR 619
S+S N
Sbjct: 306 ISESTNH 312
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 47/100 (47%), Gaps = 15/100 (15%)
Query: 448 TARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSA----- 502
A G+ ++ S +F H ++ A N+L+ I DFGL + +P
Sbjct: 130 VAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGL--MRALPQNDDHXVMQEHR 184
Query: 503 ----GYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAP 537
+ APE ++TR SH SD + FGV L EM T G+ P
Sbjct: 185 KVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 69/169 (40%), Gaps = 16/169 (9%)
Query: 382 QQMEIVGRVGQHPNVVPL----RAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLD 437
+++E+ R Q P++V + Y + L+V + G L + + G
Sbjct: 57 REVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDR---GDQAFT 113
Query: 438 WETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCI---SDFGL---TPL 491
+I+ + ++HS+ H ++K N+L I +DFG T
Sbjct: 114 EREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS 170
Query: 492 MNVPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQS 540
N P + Y APEV+ K+ D++S GV++ +L G P S
Sbjct: 171 HNSLTEPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS 219
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 47/100 (47%), Gaps = 15/100 (15%)
Query: 448 TARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSA----- 502
A G+ ++ S +F H ++ A N+L+ I DFGL + +P
Sbjct: 120 VAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGL--MRALPQNDDHXVMQEHR 174
Query: 503 ----GYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAP 537
+ APE ++TR SH SD + FGV L EM T G+ P
Sbjct: 175 KVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 89/214 (41%), Gaps = 19/214 (8%)
Query: 345 VLGKGSYGTAYKAVL-----EESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPL 399
+LG+G +G Y+ V E+ ++ ++ + HP++V L
Sbjct: 19 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 78
Query: 400 RAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMG 459
++ ++ + + G L L N+ + + T V L + +A++ S+
Sbjct: 79 IGII-EEEPTWIIMELYPYGELGHYLERNKNSLKVL----TLVLYSLQICKAMAYLESIN 133
Query: 460 GPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN----VPATPSR-SAGYRAPEVIETRK 514
H +I N+L+ + DFGL+ + A+ +R + +PE I R+
Sbjct: 134 C---VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRR 190
Query: 515 HSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMV 547
+ SDV+ F V + E+L+ GK P D++
Sbjct: 191 FTTASDVWMFAVCMWEILSFGKQPFFWLENKDVI 224
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 47/100 (47%), Gaps = 15/100 (15%)
Query: 448 TARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSA----- 502
A G+ ++ S +F H ++ A N+L+ I DFGL + +P
Sbjct: 124 VAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGL--MRALPQNDDHYVMQEHR 178
Query: 503 ----GYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAP 537
+ APE ++TR SH SD + FGV L EM T G+ P
Sbjct: 179 KVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 218
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 89/214 (41%), Gaps = 19/214 (8%)
Query: 345 VLGKGSYGTAYKAVL-----EESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPL 399
+LG+G +G Y+ V E+ ++ ++ + HP++V L
Sbjct: 31 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 90
Query: 400 RAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMG 459
++ ++ + + G L L N+ + + T V L + +A++ S+
Sbjct: 91 IGII-EEEPTWIIMELYPYGELGHYLERNKNSLKVL----TLVLYSLQICKAMAYLESIN 145
Query: 460 GPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN----VPATPSR-SAGYRAPEVIETRK 514
H +I N+L+ + DFGL+ + A+ +R + +PE I R+
Sbjct: 146 C---VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRR 202
Query: 515 HSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMV 547
+ SDV+ F V + E+L+ GK P D++
Sbjct: 203 FTTASDVWMFAVCMWEILSFGKQPFFWLENKDVI 236
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 47/100 (47%), Gaps = 15/100 (15%)
Query: 448 TARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSA----- 502
A G+ ++ S +F H ++ A N+L+ I DFGL + +P
Sbjct: 124 VAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGL--MRALPQNDDHYVMQEHR 178
Query: 503 ----GYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAP 537
+ APE ++TR SH SD + FGV L EM T G+ P
Sbjct: 179 KVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 218
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 8/88 (9%)
Query: 465 HGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAG---YRAPEVIE-----TRKHS 516
H ++K SN+L+++ + DFG++ + RSAG Y APE I+ +
Sbjct: 148 HRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYD 207
Query: 517 HKSDVYSFGVLLLEMLTGKAPLQSPTRD 544
++DV+S G+ L+E+ TG+ P ++ D
Sbjct: 208 IRADVWSLGISLVELATGQFPYKNCKTD 235
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 47/100 (47%), Gaps = 15/100 (15%)
Query: 448 TARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSA----- 502
A G+ ++ S +F H ++ A N+L+ I DFGL + +P
Sbjct: 130 VAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGL--MRALPQNDDHYVMQEHR 184
Query: 503 ----GYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAP 537
+ APE ++TR SH SD + FGV L EM T G+ P
Sbjct: 185 KVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 47/100 (47%), Gaps = 15/100 (15%)
Query: 448 TARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSA----- 502
A G+ ++ S +F H ++ A N+L+ I DFGL + +P
Sbjct: 120 VAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGL--MRALPQNDDHYVMQEHR 174
Query: 503 ----GYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAP 537
+ APE ++TR SH SD + FGV L EM T G+ P
Sbjct: 175 KVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/308 (20%), Positives = 114/308 (37%), Gaps = 54/308 (17%)
Query: 343 AEVLGKGSYG-----TAYKAVLEESTTXXXXXXXXXXXXXRDFE---QQMEIVGRVGQHP 394
+ LG G++G TAY + ++ + E +++++ +G H
Sbjct: 51 GKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHM 110
Query: 395 NVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKIL--------- 445
N+V L L++ +Y G L L R + +T I+
Sbjct: 111 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICS---KTSPAIMEDDELALDL 167
Query: 446 -------LGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN----- 493
A+G+A + S H ++ A N+L+ I DFGL +
Sbjct: 168 EDLLSFSYQVAKGMAFLASKNC---IHRDLAARNILLTHGRITKICDFGLARDIKNDSNY 224
Query: 494 -VPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPR 551
V + APE I ++ +SDV+S+G+ L E+ + G +P D
Sbjct: 225 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK----- 279
Query: 552 WVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEV 611
+++E R + E +M I C P RP ++V++IE+
Sbjct: 280 -FYKMIKEG----------FRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEK- 327
Query: 612 RQSDSENR 619
+ S+S N
Sbjct: 328 QISESTNH 335
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 47/100 (47%), Gaps = 15/100 (15%)
Query: 448 TARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSA----- 502
A G+ ++ S +F H ++ A N+L+ I DFGL + +P
Sbjct: 120 VAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGL--MRALPQNDDHYVMQEHR 174
Query: 503 ----GYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAP 537
+ APE ++TR SH SD + FGV L EM T G+ P
Sbjct: 175 KVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 79/178 (44%), Gaps = 18/178 (10%)
Query: 392 QHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLH--GNRGAGRTPLDWETRVKILLGTA 449
+H N+V L +++ LV++Y L L GN ++ L
Sbjct: 58 KHANIVTLHDIIHTEKSLTLVFEYL-DKDLKQYLDDCGN------IINMHNVKLFLFQLL 110
Query: 450 RGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR----SAGYR 505
RG+A+ H K H ++K N+LIN+ + ++DFGL ++P + YR
Sbjct: 111 RGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYR 167
Query: 506 APEV-IETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVD-LPRWVQSVVREEW 561
P++ + + +S + D++ G + EM TG+ T ++ + + R + + E W
Sbjct: 168 PPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETW 225
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 64/307 (20%), Positives = 115/307 (37%), Gaps = 54/307 (17%)
Query: 344 EVLGKGSYG-----TAYKAVLEESTTXXXXXXXXXXXXXRDFE---QQMEIVGRVGQHPN 395
+ LG G++G TAY + ++ + E +++++ +G H N
Sbjct: 45 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMN 104
Query: 396 VVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKIL---------- 445
+V L L++ +Y G L L R + +T I+
Sbjct: 105 IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICS---KTSPAIMEDDELALDLE 161
Query: 446 ------LGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN------ 493
A+G+A + S H ++ A N+L+ I DFGL +
Sbjct: 162 DLLSFSYQVAKGMAFLASKNC---IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV 218
Query: 494 VPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRW 552
V + APE I ++ +SDV+S+G+ L E+ + G +P D
Sbjct: 219 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK------ 272
Query: 553 VQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVR 612
+++E + R + E +M I C P RP ++V++IE+ +
Sbjct: 273 FYKMIKEGF----------RMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEK-Q 321
Query: 613 QSDSENR 619
S+S N
Sbjct: 322 ISESTNH 328
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 64/307 (20%), Positives = 114/307 (37%), Gaps = 54/307 (17%)
Query: 344 EVLGKGSYG-----TAYKAVLEESTTXXXXXXXXXXXXXRDFE---QQMEIVGRVGQHPN 395
+ LG G++G TAY + ++ + E +++++ +G H N
Sbjct: 47 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMN 106
Query: 396 VVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKIL---------- 445
+V L L++ +Y G L L R + +T I+
Sbjct: 107 IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICS---KTSPAIMEDDELALDLE 163
Query: 446 ------LGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN------ 493
A+G+A + S H ++ A N+L+ I DFGL +
Sbjct: 164 DLLSFSYQVAKGMAFLASKNC---IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV 220
Query: 494 VPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRW 552
V + APE I ++ +SDV+S+G+ L E+ + G +P D
Sbjct: 221 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK------ 274
Query: 553 VQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVR 612
+++E R + E +M I C P RP ++V++IE+ +
Sbjct: 275 FYKMIKEG----------FRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEK-Q 323
Query: 613 QSDSENR 619
S+S N
Sbjct: 324 ISESTNH 330
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 75/210 (35%), Gaps = 28/210 (13%)
Query: 344 EVLGKGSYGTAYKAVL----EESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPL 399
E +GKG++ + V E + E++ I R+ +H N+V L
Sbjct: 10 EDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARIC-RLLKHSNIVRL 68
Query: 400 RAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMG 459
+ LV+D G L + R + V H H MG
Sbjct: 69 HDSISEEGFHYLVFDLVTGGELFEDI-----VAREYYSEADASHCIQQILEAVLHCHQMG 123
Query: 460 GPKFTHGNIKASNVLINQDLDGC---ISDFGLT--------PLMNVPATPSRSAGYRAPE 508
H ++K N+L+ G ++DFGL TP GY +PE
Sbjct: 124 ---VVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTP----GYLSPE 176
Query: 509 VIETRKHSHKSDVYSFGVLLLEMLTGKAPL 538
V+ + D+++ GV+L +L G P
Sbjct: 177 VLRKEAYGKPVDIWACGVILYILLVGYPPF 206
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 64/151 (42%), Gaps = 19/151 (12%)
Query: 392 QHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGR---TPLDWETRVKILLGT 448
+HPN+V L + K LV++Y L L RG + W+T
Sbjct: 60 KHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTL------Q 113
Query: 449 ARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA----TPSRSAGY 504
A H H+ H ++K N+LI + + DFG L+ P+ + Y
Sbjct: 114 AVNFCHKHNC-----IHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWY 168
Query: 505 RAPE-VIETRKHSHKSDVYSFGVLLLEMLTG 534
R+PE ++ ++ DV++ G + E+L+G
Sbjct: 169 RSPELLVGDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 60/124 (48%), Gaps = 17/124 (13%)
Query: 421 LSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLD 480
L ++H ++ PL E L RG+ ++HS + H ++K SN+L+N++ +
Sbjct: 146 LHQIIHSSQ-----PLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCE 197
Query: 481 GCISDFGLTP-LMNVPATPS-------RSAGYRAPEV-IETRKHSHKSDVYSFGVLLLEM 531
I DFG+ L PA + YRAPE+ + +++ D++S G + EM
Sbjct: 198 LKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEM 257
Query: 532 LTGK 535
L +
Sbjct: 258 LARR 261
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 72/169 (42%), Gaps = 16/169 (9%)
Query: 382 QQMEIVGRVGQHPNVVPL----RAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLD 437
+++E+ R Q P++V + Y + L+V + G L + + +RG
Sbjct: 103 REVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVXECLDGGELFSRIQ-DRGDQAFTER 161
Query: 438 WETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCI---SDFGL---TPL 491
+ + +G A + ++HS+ H ++K N+L I +DFG T
Sbjct: 162 EASEIXKSIGEA--IQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS 216
Query: 492 MNVPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQS 540
N TP + Y APEV+ K+ D +S GV+ +L G P S
Sbjct: 217 HNSLTTPCYTPYYVAPEVLGPEKYDKSCDXWSLGVIXYILLCGYPPFYS 265
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 60/124 (48%), Gaps = 17/124 (13%)
Query: 421 LSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLD 480
L ++H ++ PL E L RG+ ++HS + H ++K SN+L+N++ +
Sbjct: 145 LHQIIHSSQ-----PLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCE 196
Query: 481 GCISDFGLTP-LMNVPATPS-------RSAGYRAPEV-IETRKHSHKSDVYSFGVLLLEM 531
I DFG+ L PA + YRAPE+ + +++ D++S G + EM
Sbjct: 197 LKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEM 256
Query: 532 LTGK 535
L +
Sbjct: 257 LARR 260
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 62/129 (48%), Gaps = 14/129 (10%)
Query: 450 RGVAHIHSMGGPKFTHGNIKASNVLIN-QDLDGCISDFGLTPLMNVPATPSR-------- 500
RG+ +IHS H ++K +N+ IN +DL I DFGL +M+ P +
Sbjct: 131 RGLKYIHS---ANVLHRDLKPANLFINTEDLVLKIGDFGLARIMD-PHYSHKGHLSEGLV 186
Query: 501 SAGYRAPEVIETRKHSHKS-DVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVRE 559
+ YR+P ++ + + K+ D+++ G + EMLTGK + + L VV E
Sbjct: 187 TKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHE 246
Query: 560 EWTAEVFDV 568
E E+ V
Sbjct: 247 EDRQELLSV 255
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 99/246 (40%), Gaps = 33/246 (13%)
Query: 321 NKLVFFEGCSYNFDLE-DLLRASAE---VLGKGSYG-----TAY---KAVLEESTTXXXX 368
N+ + + Y +DL+ + R + E VLG G++G TAY K +
Sbjct: 24 NEYFYVDFREYEYDLKWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKML 83
Query: 369 XXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGN 428
+++++ ++G H N+V L L+++Y G L L
Sbjct: 84 KEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSK 143
Query: 429 RGA-GRTPLDWETRVKI-------------LLGTARGVAH-IHSMGGPKFTHGNIKASNV 473
R +++E + ++ LL A VA + + H ++ A NV
Sbjct: 144 REKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNV 203
Query: 474 LINQDLDGCISDFGLT-PLMN-----VPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVL 527
L+ I DFGL +M+ V + APE + ++ KSDV+S+G+L
Sbjct: 204 LVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGIL 263
Query: 528 LLEMLT 533
L E+ +
Sbjct: 264 LWEIFS 269
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 65/151 (43%), Gaps = 13/151 (8%)
Query: 392 QHPNVVPL----RAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLG 447
+HPNVV L ++ KL + L+T L G + ET ++
Sbjct: 72 EHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPG---VPTETIKDMMFQ 128
Query: 448 TARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR---SAGY 504
RG+ +HS + H ++K N+L+ ++DFGL + + + + Y
Sbjct: 129 LLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWY 185
Query: 505 RAPEVIETRKHSHKSDVYSFGVLLLEMLTGK 535
RAPEV+ ++ D++S G + EM K
Sbjct: 186 RAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 65/151 (43%), Gaps = 13/151 (8%)
Query: 392 QHPNVVPL----RAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLG 447
+HPNVV L ++ KL + L+T L G + ET ++
Sbjct: 72 EHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPG---VPTETIKDMMFQ 128
Query: 448 TARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR---SAGY 504
RG+ +HS + H ++K N+L+ ++DFGL + + + + Y
Sbjct: 129 LLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWY 185
Query: 505 RAPEVIETRKHSHKSDVYSFGVLLLEMLTGK 535
RAPEV+ ++ D++S G + EM K
Sbjct: 186 RAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 13/85 (15%)
Query: 464 THGNIKASNVLINQDLDGCISDFG---------LTPLMNVPATPSRSAGYRAPEVIETRK 514
TH ++K N+L++ D + DFG LT L N T Y APE
Sbjct: 156 THRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGT----LYYXAPERFSESH 211
Query: 515 HSHKSDVYSFGVLLLEMLTGKAPLQ 539
++++D+Y+ +L E LTG P Q
Sbjct: 212 ATYRADIYALTCVLYECLTGSPPYQ 236
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 84/212 (39%), Gaps = 20/212 (9%)
Query: 345 VLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRD---FEQQMEIVGRVGQHPNVVPLRA 401
+G+GS+G K +++ T D F+Q++EI+ + HPN++ L
Sbjct: 33 TIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSL-DHPNIIRLYE 90
Query: 402 YYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGP 461
+ + LV + G L R + +I+ VA+ H +
Sbjct: 91 TFEDNTDIYLVMELCTGGELF-----ERVVHKRVFRESDAARIMKDVLSAVAYCHKLN-- 143
Query: 462 KFTHGNIKASNVLINQDLDGC---ISDFGLTPLMNVPATPSRSAG---YRAPEVIETRKH 515
H ++K N L D + DFGL G Y +P+V+E +
Sbjct: 144 -VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGL-Y 201
Query: 516 SHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMV 547
+ D +S GV++ +L G P +PT +++
Sbjct: 202 GPECDEWSAGVMMYVLLCGYPPFSAPTDXEVM 233
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 72/169 (42%), Gaps = 25/169 (14%)
Query: 390 VGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTA 449
+GQH +VV + + D L+ +Y GSL+ + N + E + +LL
Sbjct: 63 LGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELK-DLLLQVG 121
Query: 450 RGVAHIHSMGGPKFTHGNIKASNVLINQ-----------DLDGC--------ISDFGLTP 490
RG+ +IHSM H +IK SN+ I++ D D I D G
Sbjct: 122 RGLRYIHSMS---LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVT 178
Query: 491 LMNVPATPSRSAGYRAPEVI-ETRKHSHKSDVYSFGVLLLEMLTGKAPL 538
++ P + + A EV+ E H K+D+++ + ++ G PL
Sbjct: 179 RISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVXA-AGAEPL 226
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 65/151 (43%), Gaps = 13/151 (8%)
Query: 392 QHPNVVPL----RAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLG 447
+HPNVV L ++ KL + L+T L G + ET ++
Sbjct: 72 EHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPG---VPTETIKDMMFQ 128
Query: 448 TARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR---SAGY 504
RG+ +HS + H ++K N+L+ ++DFGL + + + + Y
Sbjct: 129 LLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWY 185
Query: 505 RAPEVIETRKHSHKSDVYSFGVLLLEMLTGK 535
RAPEV+ ++ D++S G + EM K
Sbjct: 186 RAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 84/211 (39%), Gaps = 20/211 (9%)
Query: 346 LGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRD---FEQQMEIVGRVGQHPNVVPLRAY 402
+G+GS+G K +++ T D F+Q++EI+ + HPN++ L
Sbjct: 17 IGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSL-DHPNIIRLYET 74
Query: 403 YYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPK 462
+ + LV + G L R + +I+ VA+ H +
Sbjct: 75 FEDNTDIYLVMELCTGGELF-----ERVVHKRVFRESDAARIMKDVLSAVAYCHKLN--- 126
Query: 463 FTHGNIKASNVLINQDLDGC---ISDFGLTPLMNVPATPSRSAG---YRAPEVIETRKHS 516
H ++K N L D + DFGL G Y +P+V+E +
Sbjct: 127 VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGL-YG 185
Query: 517 HKSDVYSFGVLLLEMLTGKAPLQSPTRDDMV 547
+ D +S GV++ +L G P +PT +++
Sbjct: 186 PECDEWSAGVMMYVLLCGYPPFSAPTDXEVM 216
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 72/169 (42%), Gaps = 25/169 (14%)
Query: 390 VGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTA 449
+GQH +VV + + D L+ +Y GSL+ + N + E + +LL
Sbjct: 65 LGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELK-DLLLQVG 123
Query: 450 RGVAHIHSMGGPKFTHGNIKASNVLINQ-----------DLDGC--------ISDFGLTP 490
RG+ +IHSM H +IK SN+ I++ D D I D G
Sbjct: 124 RGLRYIHSMS---LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVT 180
Query: 491 LMNVPATPSRSAGYRAPEVI-ETRKHSHKSDVYSFGVLLLEMLTGKAPL 538
++ P + + A EV+ E H K+D+++ + ++ G PL
Sbjct: 181 RISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVV-CAAGAEPL 228
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 79/170 (46%), Gaps = 27/170 (15%)
Query: 382 QQMEIVGRVGQHPNVVPLRAYYY--SKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWE 439
Q++ I+ ++ HPNVV L ++D +V++ G + + PL +
Sbjct: 85 QEIAILKKL-DHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEV------PTLKPLSED 137
Query: 440 TRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTP--------L 491
+G+ ++H K H +IK SN+L+ +D I+DFG++ L
Sbjct: 138 QARFYFQDLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALL 194
Query: 492 MNVPATPSRSAGYRAPEVI-ETRK-HSHKS-DVYSFGVLLLEMLTGKAPL 538
N TP+ + APE + ETRK S K+ DV++ GV L + G+ P
Sbjct: 195 SNTVGTPA----FMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPF 240
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 72/169 (42%), Gaps = 25/169 (14%)
Query: 390 VGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTA 449
+GQH +VV + + D L+ +Y GSL+ + N + E + +LL
Sbjct: 65 LGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELK-DLLLQVG 123
Query: 450 RGVAHIHSMGGPKFTHGNIKASNVLINQ-----------DLDGC--------ISDFGLTP 490
RG+ +IHSM H +IK SN+ I++ D D I D G
Sbjct: 124 RGLRYIHSMS---LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVT 180
Query: 491 LMNVPATPSRSAGYRAPEVI-ETRKHSHKSDVYSFGVLLLEMLTGKAPL 538
++ P + + A EV+ E H K+D+++ + ++ G PL
Sbjct: 181 RISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVV-CAAGAEPL 228
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 105/238 (44%), Gaps = 31/238 (13%)
Query: 346 LGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFE----QQMEIVGRVGQHPNVVPL-- 399
+G+G++G +KA ++ F ++++I+ ++ +H NVV L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKIL-QLLKHENVVNLIE 84
Query: 400 ------RAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVA 453
Y K LV+D F L+ LL N T + + +++LL G+
Sbjct: 85 ICRTKASPYNRCKGSIYLVFD-FCEHDLAGLL-SNVLVKFTLSEIKRVMQMLLN---GLY 139
Query: 454 HIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP--ATPSR------SAGYR 505
+IH K H ++KA+NVLI +D ++DFGL ++ + P+R + YR
Sbjct: 140 YIHR---NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYR 196
Query: 506 APE-VIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDL-PRWVQSVVREEW 561
PE ++ R + D++ G ++ EM T +Q T + L + S+ E W
Sbjct: 197 PPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVW 254
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 62/138 (44%), Gaps = 26/138 (18%)
Query: 414 DYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNV 473
+Y + +L L+H + W +IL +++IHS G H ++K N+
Sbjct: 95 EYCENRTLYDLIHSENLNQQRDEYWRLFRQIL----EALSYIHSQG---IIHRDLKPMNI 147
Query: 474 LINQDLDGCISDFGLTPLM------------NVPATPSR------SAGYRAPEVIE-TRK 514
I++ + I DFGL + N+P + +A Y A EV++ T
Sbjct: 148 FIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGH 207
Query: 515 HSHKSDVYSFGVLLLEML 532
++ K D+YS G++ EM+
Sbjct: 208 YNEKIDMYSLGIIFFEMI 225
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 72/169 (42%), Gaps = 25/169 (14%)
Query: 390 VGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTA 449
+GQH +VV + + D L+ +Y GSL+ + N + E + +LL
Sbjct: 67 LGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELK-DLLLQVG 125
Query: 450 RGVAHIHSMGGPKFTHGNIKASNVLINQ-----------DLDGC--------ISDFGLTP 490
RG+ +IHSM H +IK SN+ I++ D D I D G
Sbjct: 126 RGLRYIHSMS---LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVT 182
Query: 491 LMNVPATPSRSAGYRAPEVI-ETRKHSHKSDVYSFGVLLLEMLTGKAPL 538
++ P + + A EV+ E H K+D+++ + ++ G PL
Sbjct: 183 RISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVV-CAAGAEPL 230
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 105/238 (44%), Gaps = 31/238 (13%)
Query: 346 LGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFE----QQMEIVGRVGQHPNVVPL-- 399
+G+G++G +KA ++ F ++++I+ ++ +H NVV L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKIL-QLLKHENVVNLIE 84
Query: 400 ------RAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVA 453
Y K LV+D F L+ LL N T + + +++LL G+
Sbjct: 85 ICRTKASPYNRCKGSIYLVFD-FCEHDLAGLL-SNVLVKFTLSEIKRVMQMLLN---GLY 139
Query: 454 HIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP--ATPSR------SAGYR 505
+IH K H ++KA+NVLI +D ++DFGL ++ + P+R + YR
Sbjct: 140 YIHR---NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYR 196
Query: 506 APE-VIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDL-PRWVQSVVREEW 561
PE ++ R + D++ G ++ EM T +Q T + L + S+ E W
Sbjct: 197 PPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVW 254
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 105/238 (44%), Gaps = 31/238 (13%)
Query: 346 LGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFE----QQMEIVGRVGQHPNVVPL-- 399
+G+G++G +KA ++ F ++++I+ ++ +H NVV L
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKIL-QLLKHENVVNLIE 83
Query: 400 ------RAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVA 453
Y K LV+D F L+ LL N T + + +++LL G+
Sbjct: 84 ICRTKASPYNRCKGSIYLVFD-FCEHDLAGLL-SNVLVKFTLSEIKRVMQMLLN---GLY 138
Query: 454 HIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP--ATPSR------SAGYR 505
+IH K H ++KA+NVLI +D ++DFGL ++ + P+R + YR
Sbjct: 139 YIHR---NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYR 195
Query: 506 APE-VIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDL-PRWVQSVVREEW 561
PE ++ R + D++ G ++ EM T +Q T + L + S+ E W
Sbjct: 196 PPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVW 253
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 105/238 (44%), Gaps = 31/238 (13%)
Query: 346 LGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFE----QQMEIVGRVGQHPNVVPL-- 399
+G+G++G +KA ++ F ++++I+ ++ +H NVV L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKIL-QLLKHENVVNLIE 84
Query: 400 ------RAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVA 453
Y K LV+D F L+ LL N T + + +++LL G+
Sbjct: 85 ICRTKASPYNRCKASIYLVFD-FCEHDLAGLL-SNVLVKFTLSEIKRVMQMLLN---GLY 139
Query: 454 HIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP--ATPSR------SAGYR 505
+IH K H ++KA+NVLI +D ++DFGL ++ + P+R + YR
Sbjct: 140 YIHR---NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYR 196
Query: 506 APE-VIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDL-PRWVQSVVREEW 561
PE ++ R + D++ G ++ EM T +Q T + L + S+ E W
Sbjct: 197 PPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVW 254
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 66/148 (44%), Gaps = 13/148 (8%)
Query: 394 PNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGR--TPLDWETRVKILLGTARG 451
P +V L + +V +Y A G + + L R GR P +I+L
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFSEPHARFYAAQIVLT---- 174
Query: 452 VAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTP-LMNVPATPSRSAGYRAPEVI 510
++HS+ + ++K N+LI+Q ++DFG + T + Y APE+I
Sbjct: 175 FEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWTLCGTPEYLAPEII 231
Query: 511 ETRKHSHKSDVYSFGVLLLEMLTGKAPL 538
++ ++ D ++ GVL+ EM G P
Sbjct: 232 LSKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 68/155 (43%), Gaps = 20/155 (12%)
Query: 394 PNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVA 453
P V+ L Y + E +L+ +Y A G + +L + D +K +L GV
Sbjct: 89 PRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQIL---EGVY 145
Query: 454 HIHSMGGPKFTHGNIKASNVLINQDL---DGCISDFGLT-------PLMNVPATPSRSAG 503
++H H ++K N+L++ D I DFG++ L + TP
Sbjct: 146 YLHQ---NNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPE---- 198
Query: 504 YRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPL 538
Y APE++ + +D+++ G++ +LT +P
Sbjct: 199 YLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPF 233
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 67/152 (44%), Gaps = 21/152 (13%)
Query: 394 PNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGR--TPLDWETRVKILLGTARG 451
P +V L + +V +Y A G + + L R GR P +I+L
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFSEPHARFYAAQIVLT---- 153
Query: 452 VAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN-----VPATPSRSAGYRA 506
++HS+ + ++K N+LI+Q ++DFG + + TP Y A
Sbjct: 154 FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLAGTPE----YLA 206
Query: 507 PEVIETRKHSHKSDVYSFGVLLLEMLTGKAPL 538
PE+I ++ ++ D ++ GVL+ EM G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 59/134 (44%), Gaps = 37/134 (27%)
Query: 433 RTPLDW-ETRVKILL-GTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTP 490
RTP+ E +K LL GV ++HS G H ++K +N L+NQD + DFGL
Sbjct: 148 RTPVYLTELHIKTLLYNLLVGVKYVHSAG---ILHRDLKPANCLVNQDCSVKVCDFGLAR 204
Query: 491 LMN--------VPATPSR-----------------------SAGYRAPEVIETRK-HSHK 518
++ +P +P + YRAPE+I ++ ++
Sbjct: 205 TVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEA 264
Query: 519 SDVYSFGVLLLEML 532
DV+S G + E+L
Sbjct: 265 IDVWSIGCIFAELL 278
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 60/138 (43%), Gaps = 26/138 (18%)
Query: 414 DYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNV 473
+Y + +L L+H + W +IL +++IHS G H N+K N+
Sbjct: 95 EYCENRTLYDLIHSENLNQQRDEYWRLFRQIL----EALSYIHSQG---IIHRNLKPXNI 147
Query: 474 LINQDLDGCISDFGLTPLM------------NVPATPSR------SAGYRAPEVIE-TRK 514
I++ + I DFGL + N+P + +A Y A EV++ T
Sbjct: 148 FIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGH 207
Query: 515 HSHKSDVYSFGVLLLEML 532
++ K D YS G++ E +
Sbjct: 208 YNEKIDXYSLGIIFFEXI 225
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 67/152 (44%), Gaps = 21/152 (13%)
Query: 394 PNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGR--TPLDWETRVKILLGTARG 451
P +V L + +V +Y A G + + L R GR P +I+L
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFSEPHARFYAAQIVLT---- 153
Query: 452 VAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN-----VPATPSRSAGYRA 506
++HS+ + ++K N+LI+Q ++DFG + + TP Y A
Sbjct: 154 FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLXGTPE----YLA 206
Query: 507 PEVIETRKHSHKSDVYSFGVLLLEMLTGKAPL 538
PE+I ++ ++ D ++ GVL+ EM G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 76/210 (36%), Gaps = 28/210 (13%)
Query: 344 EVLGKGSYGTAYKAVL----EESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPL 399
E LGKG++ + + +E + E++ I R+ +HPN+V L
Sbjct: 10 EELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARIC-RLLKHPNIVRL 68
Query: 400 RAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMG 459
+ LV+D G L + R + V H H G
Sbjct: 69 HDSISEEGFHYLVFDLVTGGELFEDI-----VAREYYSEADASHCIQQILESVNHCHLNG 123
Query: 460 GPKFTHGNIKASNVLINQDLDGC---ISDFGLT--------PLMNVPATPSRSAGYRAPE 508
H ++K N+L+ G ++DFGL TP GY +PE
Sbjct: 124 ---IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTP----GYLSPE 176
Query: 509 VIETRKHSHKSDVYSFGVLLLEMLTGKAPL 538
V+ + D+++ GV+L +L G P
Sbjct: 177 VLRKDPYGKPVDMWACGVILYILLVGYPPF 206
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 67/152 (44%), Gaps = 21/152 (13%)
Query: 394 PNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGR--TPLDWETRVKILLGTARG 451
P +V L + +V +Y A G + + L R GR P +I+L
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFSEPHARFYAAQIVLT---- 153
Query: 452 VAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN-----VPATPSRSAGYRA 506
++HS+ + ++K N+LI+Q ++DFG + + TP Y A
Sbjct: 154 FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----YLA 206
Query: 507 PEVIETRKHSHKSDVYSFGVLLLEMLTGKAPL 538
PE+I ++ ++ D ++ GVL+ EM G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 67/152 (44%), Gaps = 21/152 (13%)
Query: 394 PNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGR--TPLDWETRVKILLGTARG 451
P +V L + +V +Y A G + + L R GR P +I+L
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFXEPHARFYAAQIVLT---- 153
Query: 452 VAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN-----VPATPSRSAGYRA 506
++HS+ + ++K N+LI+Q ++DFG + + TP Y A
Sbjct: 154 FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----YLA 206
Query: 507 PEVIETRKHSHKSDVYSFGVLLLEMLTGKAPL 538
PE+I ++ ++ D ++ GVL+ EM G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 76/210 (36%), Gaps = 28/210 (13%)
Query: 344 EVLGKGSYGTAYKAVL----EESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPL 399
E LGKG++ + + +E + E++ I R+ +HPN+V L
Sbjct: 10 EELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARIC-RLLKHPNIVRL 68
Query: 400 RAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMG 459
+ LV+D G L + R + V H H G
Sbjct: 69 HDSISEEGFHYLVFDLVTGGELFEDI-----VAREYYSEADASHCIQQILESVNHCHLNG 123
Query: 460 GPKFTHGNIKASNVLINQDLDGC---ISDFGLT--------PLMNVPATPSRSAGYRAPE 508
H ++K N+L+ G ++DFGL TP GY +PE
Sbjct: 124 ---IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTP----GYLSPE 176
Query: 509 VIETRKHSHKSDVYSFGVLLLEMLTGKAPL 538
V+ + D+++ GV+L +L G P
Sbjct: 177 VLRKDPYGKPVDMWACGVILYILLVGYPPF 206
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 85/208 (40%), Gaps = 32/208 (15%)
Query: 344 EVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQH---------P 394
+V+GKGS+G KA + F +Q R+ +H
Sbjct: 103 KVIGKGSFGQVVKAY---DHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTM 159
Query: 395 NVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAH 454
NV+ + + ++ + ++ S +L L+ N+ G + L R AH
Sbjct: 160 NVIHMLENFTFRNHICMTFE-LLSMNLYELIKKNKFQGFS-----------LPLVRKFAH 207
Query: 455 -----IHSMGGPKFTHGNIKASNVLINQDLDGCIS--DFGLTPLMNVPA-TPSRSAGYRA 506
+ ++ + H ++K N+L+ Q I DFG + + T +S YRA
Sbjct: 208 SILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSRFYRA 267
Query: 507 PEVIETRKHSHKSDVYSFGVLLLEMLTG 534
PEVI ++ D++S G +L E+LTG
Sbjct: 268 PEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 67/152 (44%), Gaps = 21/152 (13%)
Query: 394 PNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGR--TPLDWETRVKILLGTARG 451
P +V L + +V +Y A G + + L R GR P +I+L
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFXEPHARFYAAQIVLT---- 153
Query: 452 VAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN-----VPATPSRSAGYRA 506
++HS+ + ++K N+LI+Q ++DFG + + TP Y A
Sbjct: 154 FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----YLA 206
Query: 507 PEVIETRKHSHKSDVYSFGVLLLEMLTGKAPL 538
PE+I ++ ++ D ++ GVL+ EM G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 67/152 (44%), Gaps = 21/152 (13%)
Query: 394 PNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGR--TPLDWETRVKILLGTARG 451
P +V L + +V +Y A G + + L R GR P +I+L
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFSEPHARFYAAQIVLT---- 153
Query: 452 VAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN-----VPATPSRSAGYRA 506
++HS+ + ++K N+LI+Q ++DFG + + TP Y A
Sbjct: 154 FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----YLA 206
Query: 507 PEVIETRKHSHKSDVYSFGVLLLEMLTGKAPL 538
PE+I ++ ++ D ++ GVL+ EM G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 67/152 (44%), Gaps = 21/152 (13%)
Query: 394 PNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGR--TPLDWETRVKILLGTARG 451
P +V L + +V +Y A G + + L R GR P +I+L
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFXEPHARFYAAQIVLT---- 153
Query: 452 VAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN-----VPATPSRSAGYRA 506
++HS+ + ++K N+LI+Q ++DFG + + TP Y A
Sbjct: 154 FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----YLA 206
Query: 507 PEVIETRKHSHKSDVYSFGVLLLEMLTGKAPL 538
PE+I ++ ++ D ++ GVL+ EM G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 67/152 (44%), Gaps = 21/152 (13%)
Query: 394 PNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGR--TPLDWETRVKILLGTARG 451
P +V L + +V +Y A G + + L R GR P +I+L
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFSEPHARFYAAQIVLT---- 153
Query: 452 VAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN-----VPATPSRSAGYRA 506
++HS+ + ++K N+LI+Q ++DFG + + TP Y A
Sbjct: 154 FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----YLA 206
Query: 507 PEVIETRKHSHKSDVYSFGVLLLEMLTGKAPL 538
PE+I ++ ++ D ++ GVL+ EM G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 67/152 (44%), Gaps = 21/152 (13%)
Query: 394 PNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGR--TPLDWETRVKILLGTARG 451
P +V L + +V +Y A G + + L R GR P +I+L
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFAEPHARFYAAQIVLT---- 153
Query: 452 VAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN-----VPATPSRSAGYRA 506
++HS+ + ++K N+LI+Q ++DFG + + TP Y A
Sbjct: 154 FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----YLA 206
Query: 507 PEVIETRKHSHKSDVYSFGVLLLEMLTGKAPL 538
PE+I ++ ++ D ++ GVL+ EM G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 67/152 (44%), Gaps = 21/152 (13%)
Query: 394 PNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGR--TPLDWETRVKILLGTARG 451
P +V L + +V +Y A G + + L R GR P +I+L
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFSEPHARFYAAQIVLT---- 154
Query: 452 VAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN-----VPATPSRSAGYRA 506
++HS+ + ++K N+LI+Q ++DFG + + TP Y A
Sbjct: 155 FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----YLA 207
Query: 507 PEVIETRKHSHKSDVYSFGVLLLEMLTGKAPL 538
PE+I ++ ++ D ++ GVL+ EM G P
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 67/152 (44%), Gaps = 21/152 (13%)
Query: 394 PNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGR--TPLDWETRVKILLGTARG 451
P +V L + +V +Y A G + + L R GR P +I+L
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFSEPHARFYAAQIVLT---- 153
Query: 452 VAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN-----VPATPSRSAGYRA 506
++HS+ + ++K N+LI+Q ++DFG + + TP Y A
Sbjct: 154 FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----YLA 206
Query: 507 PEVIETRKHSHKSDVYSFGVLLLEMLTGKAPL 538
PE+I ++ ++ D ++ GVL+ EM G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 67/152 (44%), Gaps = 21/152 (13%)
Query: 394 PNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGR--TPLDWETRVKILLGTARG 451
P +V L + +V +Y A G + + L R GR P +I+L
Sbjct: 96 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFXEPHARFYAAQIVLT---- 148
Query: 452 VAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN-----VPATPSRSAGYRA 506
++HS+ + ++K N+LI+Q ++DFG + + TP Y A
Sbjct: 149 FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----YLA 201
Query: 507 PEVIETRKHSHKSDVYSFGVLLLEMLTGKAPL 538
PE+I ++ ++ D ++ GVL+ EM G P
Sbjct: 202 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 233
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 67/152 (44%), Gaps = 21/152 (13%)
Query: 394 PNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGR--TPLDWETRVKILLGTARG 451
P +V L + +V +Y A G + + L R GR P +I+L
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFXEPHARFYAAQIVLT---- 174
Query: 452 VAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN-----VPATPSRSAGYRA 506
++HS+ + ++K N+LI+Q ++DFG + + TP Y A
Sbjct: 175 FEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----YLA 227
Query: 507 PEVIETRKHSHKSDVYSFGVLLLEMLTGKAPL 538
PE+I ++ ++ D ++ GVL+ EM G P
Sbjct: 228 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 67/152 (44%), Gaps = 21/152 (13%)
Query: 394 PNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGR--TPLDWETRVKILLGTARG 451
P +V L + +V +Y A G + + L R GR P +I+L
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFSEPHARFYAAQIVLT---- 153
Query: 452 VAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN-----VPATPSRSAGYRA 506
++HS+ + ++K N+LI+Q ++DFG + + TP Y A
Sbjct: 154 FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----YLA 206
Query: 507 PEVIETRKHSHKSDVYSFGVLLLEMLTGKAPL 538
PE+I ++ ++ D ++ GVL+ EM G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 67/152 (44%), Gaps = 21/152 (13%)
Query: 394 PNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGR--TPLDWETRVKILLGTARG 451
P +V L + +V +Y A G + + L R GR P +I+L
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFSEPHARFYAAQIVLT---- 153
Query: 452 VAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN-----VPATPSRSAGYRA 506
++HS+ + ++K N+LI+Q ++DFG + + TP Y A
Sbjct: 154 FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----YLA 206
Query: 507 PEVIETRKHSHKSDVYSFGVLLLEMLTGKAPL 538
PE+I ++ ++ D ++ GVL+ EM G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 85/208 (40%), Gaps = 32/208 (15%)
Query: 344 EVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQH---------P 394
+V+GKGS+G KA + F +Q R+ +H
Sbjct: 103 KVIGKGSFGQVVKAY---DHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTM 159
Query: 395 NVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAH 454
NV+ + + ++ + ++ S +L L+ N+ G + L R AH
Sbjct: 160 NVIHMLENFTFRNHICMTFE-LLSMNLYELIKKNKFQGFS-----------LPLVRKFAH 207
Query: 455 -----IHSMGGPKFTHGNIKASNVLINQDLDGCIS--DFGLTPLMNVPA-TPSRSAGYRA 506
+ ++ + H ++K N+L+ Q I DFG + + T +S YRA
Sbjct: 208 SILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSRFYRA 267
Query: 507 PEVIETRKHSHKSDVYSFGVLLLEMLTG 534
PEVI ++ D++S G +L E+LTG
Sbjct: 268 PEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 62/135 (45%), Gaps = 15/135 (11%)
Query: 411 LVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKA 470
+V +Y +L ++H P+ + ++++ + + H G H ++K
Sbjct: 93 IVMEYVDGVTLRDIVHTE-----GPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKP 144
Query: 471 SNVLINQDLDGCISDFGLTPLM-----NVPATPS--RSAGYRAPEVIETRKHSHKSDVYS 523
+N+LI+ + DFG+ + +V T + +A Y +PE +SDVYS
Sbjct: 145 ANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYS 204
Query: 524 FGVLLLEMLTGKAPL 538
G +L E+LTG+ P
Sbjct: 205 LGCVLYEVLTGEPPF 219
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 454 HIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN-----VPATPSRSAGYRAPE 508
++HS+ + ++K N++I+Q ++DFGL + + TP Y APE
Sbjct: 156 YLHSLD---LIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWXLCGTPE----YLAPE 208
Query: 509 VIETRKHSHKSDVYSFGVLLLEMLTGKAPL 538
+I ++ ++ D ++ GVL+ EM G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 454 HIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN-----VPATPSRSAGYRAPE 508
++HS+ + ++K N++I+Q ++DFGL + + TP Y APE
Sbjct: 156 YLHSLD---LIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWXLCGTPE----YLAPE 208
Query: 509 VIETRKHSHKSDVYSFGVLLLEMLTGKAPL 538
+I ++ ++ D ++ GVL+ EM G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 454 HIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTP-LMNVPATPSRSAGYRAPEVIET 512
++HS+ + ++K N+LI+Q ++DFG + T + Y APE+I +
Sbjct: 142 YLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIILS 198
Query: 513 RKHSHKSDVYSFGVLLLEMLTGKAPL 538
+ ++ D ++ GVL+ EM G P
Sbjct: 199 KGYNKAVDWWALGVLIYEMAAGYPPF 224
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 454 HIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTP-LMNVPATPSRSAGYRAPEVIET 512
++HS+ + ++K N+LI+Q ++DFG + T + Y APE+I +
Sbjct: 157 YLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIILS 213
Query: 513 RKHSHKSDVYSFGVLLLEMLTGKAPL 538
+ ++ D ++ GVL+ EM G P
Sbjct: 214 KGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 65/143 (45%), Gaps = 15/143 (10%)
Query: 411 LVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKA 470
+V +Y +L ++H P+ + ++++ + + H G H ++K
Sbjct: 93 IVMEYVDGVTLRDIVHTE-----GPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKP 144
Query: 471 SNVLINQDLDGCISDFGLTPLM-----NVPATPS--RSAGYRAPEVIETRKHSHKSDVYS 523
+N++I+ + DFG+ + +V T + +A Y +PE +SDVYS
Sbjct: 145 ANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYS 204
Query: 524 FGVLLLEMLTGKAPLQSPTRDDM 546
G +L E+LTG+ P + D +
Sbjct: 205 LGCVLYEVLTGEPPFTGDSPDSV 227
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 12/90 (13%)
Query: 454 HIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN-----VPATPSRSAGYRAPE 508
++HS+ + ++K N+LI+Q ++DFG + + TP Y APE
Sbjct: 157 YLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----YLAPE 209
Query: 509 VIETRKHSHKSDVYSFGVLLLEMLTGKAPL 538
+I ++ ++ D ++ GVL+ EM G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 12/90 (13%)
Query: 454 HIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN-----VPATPSRSAGYRAPE 508
++HS+ + ++K N+LI+Q ++DFG + + TP Y APE
Sbjct: 157 YLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----YLAPE 209
Query: 509 VIETRKHSHKSDVYSFGVLLLEMLTGKAPL 538
+I ++ ++ D ++ GVL+ EM G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 67/152 (44%), Gaps = 21/152 (13%)
Query: 394 PNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGR--TPLDWETRVKILLGTARG 451
P +V L + +V +Y A G + + L R GR P +I+L
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFSEPHARFYAAQIVLT---- 153
Query: 452 VAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN-----VPATPSRSAGYRA 506
++HS+ + ++K N++I+Q ++DFG + + TP Y A
Sbjct: 154 FEYLHSLD---LIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----YLA 206
Query: 507 PEVIETRKHSHKSDVYSFGVLLLEMLTGKAPL 538
PE+I ++ ++ D ++ GVL+ EM G P
Sbjct: 207 PEIIISKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 12/90 (13%)
Query: 454 HIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN-----VPATPSRSAGYRAPE 508
++HS+ + ++K N+LI+Q ++DFG + + TP Y APE
Sbjct: 156 YLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----YLAPE 208
Query: 509 VIETRKHSHKSDVYSFGVLLLEMLTGKAPL 538
+I ++ ++ D ++ GVL+ EM G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 12/90 (13%)
Query: 454 HIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN-----VPATPSRSAGYRAPE 508
++HS+ + ++K N+LI+Q ++DFG + + TP Y APE
Sbjct: 157 YLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----YLAPE 209
Query: 509 VIETRKHSHKSDVYSFGVLLLEMLTGKAPL 538
+I ++ ++ D ++ GVL+ EM G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 12/90 (13%)
Query: 454 HIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN-----VPATPSRSAGYRAPE 508
++HS+ + ++K N+LI+Q ++DFG + + TP Y APE
Sbjct: 157 YLHSLD---LIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPE----YLAPE 209
Query: 509 VIETRKHSHKSDVYSFGVLLLEMLTGKAPL 538
+I ++ ++ D ++ GVL+ EM G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 12/90 (13%)
Query: 454 HIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN-----VPATPSRSAGYRAPE 508
++HS+ + ++K N+LI+Q ++DFG + + TP Y APE
Sbjct: 156 YLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----YLAPE 208
Query: 509 VIETRKHSHKSDVYSFGVLLLEMLTGKAPL 538
+I ++ ++ D ++ GVL+ EM G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 12/90 (13%)
Query: 454 HIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN-----VPATPSRSAGYRAPE 508
++HS+ + ++K N+LI+Q ++DFG + + TP Y APE
Sbjct: 156 YLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----YLAPE 208
Query: 509 VIETRKHSHKSDVYSFGVLLLEMLTGKAPL 538
+I ++ ++ D ++ GVL+ EM G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 12/90 (13%)
Query: 454 HIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN-----VPATPSRSAGYRAPE 508
++HS+ + ++K N+LI+Q ++DFG + + TP Y APE
Sbjct: 157 YLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----YLAPE 209
Query: 509 VIETRKHSHKSDVYSFGVLLLEMLTGKAPL 538
+I ++ ++ D ++ GVL+ EM G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 12/90 (13%)
Query: 454 HIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN-----VPATPSRSAGYRAPE 508
++HS+ + ++K N+LI+Q ++DFG + + TP Y APE
Sbjct: 156 YLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----YLAPE 208
Query: 509 VIETRKHSHKSDVYSFGVLLLEMLTGKAPL 538
+I ++ ++ D ++ GVL+ EM G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 12/90 (13%)
Query: 454 HIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN-----VPATPSRSAGYRAPE 508
++HS+ + ++K N+LI+Q ++DFG + + TP Y APE
Sbjct: 156 YLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----YLAPE 208
Query: 509 VIETRKHSHKSDVYSFGVLLLEMLTGKAPL 538
+I ++ ++ D ++ GVL+ EM G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 12/90 (13%)
Query: 454 HIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN-----VPATPSRSAGYRAPE 508
++HS+ + ++K N+LI+Q ++DFG + + TP Y APE
Sbjct: 149 YLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----YLAPE 201
Query: 509 VIETRKHSHKSDVYSFGVLLLEMLTGKAPL 538
+I ++ ++ D ++ GVL+ EM G P
Sbjct: 202 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 12/90 (13%)
Query: 454 HIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN-----VPATPSRSAGYRAPE 508
++HS+ + ++K N+LI+Q ++DFG + + TP Y APE
Sbjct: 156 YLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----YLAPE 208
Query: 509 VIETRKHSHKSDVYSFGVLLLEMLTGKAPL 538
+I ++ ++ D ++ GVL+ EM G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 12/90 (13%)
Query: 454 HIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN-----VPATPSRSAGYRAPE 508
++HS+ + ++K N+LI+Q ++DFG + + TP Y APE
Sbjct: 157 YLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----YLAPE 209
Query: 509 VIETRKHSHKSDVYSFGVLLLEMLTGKAPL 538
+I ++ ++ D ++ GVL+ EM G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 12/90 (13%)
Query: 454 HIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN-----VPATPSRSAGYRAPE 508
++HS+ + ++K N+LI+Q ++DFG + + TP Y APE
Sbjct: 156 YLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----YLAPE 208
Query: 509 VIETRKHSHKSDVYSFGVLLLEMLTGKAPL 538
+I ++ ++ D ++ GVL+ EM G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 12/90 (13%)
Query: 454 HIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN-----VPATPSRSAGYRAPE 508
++HS+ + ++K N+LI+Q ++DFG + + TP Y APE
Sbjct: 156 YLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----YLAPE 208
Query: 509 VIETRKHSHKSDVYSFGVLLLEMLTGKAPL 538
+I ++ ++ D ++ GVL+ EM G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 12/90 (13%)
Query: 454 HIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN-----VPATPSRSAGYRAPE 508
++HS+ + ++K N+LI+Q ++DFG + + TP Y APE
Sbjct: 156 YLHSLD---LIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPE----YLAPE 208
Query: 509 VIETRKHSHKSDVYSFGVLLLEMLTGKAPL 538
+I ++ ++ D ++ GVL+ EM G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 12/90 (13%)
Query: 454 HIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN-----VPATPSRSAGYRAPE 508
++HS+ + ++K N+LI+Q ++DFG + + TP Y APE
Sbjct: 149 YLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----YLAPE 201
Query: 509 VIETRKHSHKSDVYSFGVLLLEMLTGKAPL 538
+I ++ ++ D ++ GVL+ EM G P
Sbjct: 202 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 12/90 (13%)
Query: 454 HIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN-----VPATPSRSAGYRAPE 508
++HS+ + ++K N+LI+Q ++DFG + + TP Y APE
Sbjct: 156 YLHSLD---LIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPE----YLAPE 208
Query: 509 VIETRKHSHKSDVYSFGVLLLEMLTGKAPL 538
+I ++ ++ D ++ GVL+ EM G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 12/90 (13%)
Query: 454 HIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN-----VPATPSRSAGYRAPE 508
++HS+ + ++K N+LI+Q ++DFG + + TP Y APE
Sbjct: 177 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----YLAPE 229
Query: 509 VIETRKHSHKSDVYSFGVLLLEMLTGKAPL 538
+I ++ ++ D ++ GVL+ EM G P
Sbjct: 230 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 12/90 (13%)
Query: 454 HIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN-----VPATPSRSAGYRAPE 508
++HS+ + ++K N+LI+Q ++DFG + + TP Y APE
Sbjct: 156 YLHSLD---LIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPE----YLAPE 208
Query: 509 VIETRKHSHKSDVYSFGVLLLEMLTGKAPL 538
+I ++ ++ D ++ GVL+ EM G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 62/135 (45%), Gaps = 15/135 (11%)
Query: 411 LVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKA 470
+V +Y +L ++H P+ + ++++ + + H G H ++K
Sbjct: 93 IVMEYVDGVTLRDIVHTE-----GPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKP 144
Query: 471 SNVLINQDLDGCISDFGLTPLM-----NVPATPS--RSAGYRAPEVIETRKHSHKSDVYS 523
+N++I+ + DFG+ + +V T + +A Y +PE +SDVYS
Sbjct: 145 ANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYS 204
Query: 524 FGVLLLEMLTGKAPL 538
G +L E+LTG+ P
Sbjct: 205 LGCVLYEVLTGEPPF 219
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 62/135 (45%), Gaps = 15/135 (11%)
Query: 411 LVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKA 470
+V +Y +L ++H P+ + ++++ + + H G H ++K
Sbjct: 93 IVMEYVDGVTLRDIVHTE-----GPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKP 144
Query: 471 SNVLINQDLDGCISDFGLTPLM-----NVPATPS--RSAGYRAPEVIETRKHSHKSDVYS 523
+N++I+ + DFG+ + +V T + +A Y +PE +SDVYS
Sbjct: 145 ANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYS 204
Query: 524 FGVLLLEMLTGKAPL 538
G +L E+LTG+ P
Sbjct: 205 LGCVLYEVLTGEPPF 219
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 67/152 (44%), Gaps = 21/152 (13%)
Query: 394 PNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGR--TPLDWETRVKILLGTARG 451
P +V L + +V +Y A G + + L R GR P +I+L
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFSEPHARFYAAQIVLT---- 153
Query: 452 VAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN-----VPATPSRSAGYRA 506
++HS+ + ++K N+LI+Q ++DFG + + TP Y A
Sbjct: 154 FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----YLA 206
Query: 507 PEVIETRKHSHKSDVYSFGVLLLEMLTGKAPL 538
PE+I ++ ++ D ++ GVL+ +M G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYQMAAGYPPF 238
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 62/135 (45%), Gaps = 15/135 (11%)
Query: 411 LVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKA 470
+V +Y +L ++H P+ + ++++ + + H G H ++K
Sbjct: 93 IVMEYVDGVTLRDIVHTE-----GPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKP 144
Query: 471 SNVLINQDLDGCISDFGLTPLM-----NVPATPS--RSAGYRAPEVIETRKHSHKSDVYS 523
+N++I+ + DFG+ + +V T + +A Y +PE +SDVYS
Sbjct: 145 ANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYS 204
Query: 524 FGVLLLEMLTGKAPL 538
G +L E+LTG+ P
Sbjct: 205 LGCVLYEVLTGEPPF 219
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 62/135 (45%), Gaps = 15/135 (11%)
Query: 411 LVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKA 470
+V +Y +L ++H P+ + ++++ + + H G H ++K
Sbjct: 110 IVMEYVDGVTLRDIVHTE-----GPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKP 161
Query: 471 SNVLINQDLDGCISDFGLTPLM-----NVPATPS--RSAGYRAPEVIETRKHSHKSDVYS 523
+N++I+ + DFG+ + +V T + +A Y +PE +SDVYS
Sbjct: 162 ANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYS 221
Query: 524 FGVLLLEMLTGKAPL 538
G +L E+LTG+ P
Sbjct: 222 LGCVLYEVLTGEPPF 236
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 67/152 (44%), Gaps = 21/152 (13%)
Query: 394 PNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGR--TPLDWETRVKILLGTARG 451
P +V L + +V +Y A G + + L R GR P +I+L
Sbjct: 88 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFSEPHARFYAAQIVLT---- 140
Query: 452 VAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN-----VPATPSRSAGYRA 506
++HS+ + ++K N+LI++ ++DFG + + TP Y A
Sbjct: 141 FEYLHSLD---LIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWXLCGTPE----YLA 193
Query: 507 PEVIETRKHSHKSDVYSFGVLLLEMLTGKAPL 538
PE+I ++ ++ D ++ GVL+ EM G P
Sbjct: 194 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 225
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 45/90 (50%), Gaps = 12/90 (13%)
Query: 454 HIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN-----VPATPSRSAGYRAPE 508
++HS+ + ++K N++I+Q ++DFG + + TP Y APE
Sbjct: 156 YLHSLD---LIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----YLAPE 208
Query: 509 VIETRKHSHKSDVYSFGVLLLEMLTGKAPL 538
+I ++ ++ D ++ GVL+ EM G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 45/90 (50%), Gaps = 12/90 (13%)
Query: 454 HIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN-----VPATPSRSAGYRAPE 508
++HS+ + ++K N++I+Q ++DFG + + TP Y APE
Sbjct: 157 YLHSLD---LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPE----YLAPE 209
Query: 509 VIETRKHSHKSDVYSFGVLLLEMLTGKAPL 538
+I ++ ++ D ++ GVL+ EM G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 45/90 (50%), Gaps = 12/90 (13%)
Query: 454 HIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN-----VPATPSRSAGYRAPE 508
++HS+ + ++K N++I+Q ++DFG + + TP Y APE
Sbjct: 156 YLHSLD---LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPE----YLAPE 208
Query: 509 VIETRKHSHKSDVYSFGVLLLEMLTGKAPL 538
+I ++ ++ D ++ GVL+ EM G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 45/90 (50%), Gaps = 12/90 (13%)
Query: 454 HIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN-----VPATPSRSAGYRAPE 508
++HS+ + ++K N++I+Q ++DFG + + TP Y APE
Sbjct: 156 YLHSLD---LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPE----YLAPE 208
Query: 509 VIETRKHSHKSDVYSFGVLLLEMLTGKAPL 538
+I ++ ++ D ++ GVL+ EM G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/203 (20%), Positives = 79/203 (38%), Gaps = 46/203 (22%)
Query: 383 QMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRV 442
+++ + G NV+ ++ + D ++ Y S +L+ L ++
Sbjct: 69 ELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDILNS--------LSFQEVR 120
Query: 443 KILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDG-CISDFGLT-----------P 490
+ +L + + IH G H ++K SN L N+ L + DFGL
Sbjct: 121 EYMLNLFKALKRIHQFG---IVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLK 177
Query: 491 LMNVPATPSRSA---------------------GYRAPEVI-ETRKHSHKSDVYSFGVLL 528
+ A R + G+RAPEV+ + + D++S GV+
Sbjct: 178 FVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIF 237
Query: 529 LEMLTGKAPLQSPTRDDMVDLPR 551
L +L+G+ P + DD+ L +
Sbjct: 238 LSLLSGRYPFYKAS-DDLTALAQ 259
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 45/90 (50%), Gaps = 12/90 (13%)
Query: 454 HIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN-----VPATPSRSAGYRAPE 508
++HS+ + ++K N++I+Q ++DFG + + TP Y APE
Sbjct: 157 YLHSLD---LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPE----YLAPE 209
Query: 509 VIETRKHSHKSDVYSFGVLLLEMLTGKAPL 538
+I ++ ++ D ++ GVL+ EM G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 45/90 (50%), Gaps = 12/90 (13%)
Query: 454 HIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN-----VPATPSRSAGYRAPE 508
++HS+ + ++K N++I+Q ++DFG + + TP Y APE
Sbjct: 157 YLHSLD---LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPE----YLAPE 209
Query: 509 VIETRKHSHKSDVYSFGVLLLEMLTGKAPL 538
+I ++ ++ D ++ GVL+ EM G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 45/90 (50%), Gaps = 12/90 (13%)
Query: 454 HIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN-----VPATPSRSAGYRAPE 508
++HS+ + ++K N++I+Q ++DFG + + TP Y APE
Sbjct: 157 YLHSLD---LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPE----YLAPE 209
Query: 509 VIETRKHSHKSDVYSFGVLLLEMLTGKAPL 538
+I ++ ++ D ++ GVL+ EM G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 62/158 (39%), Gaps = 31/158 (19%)
Query: 451 GVAHIHSMGGPKFTHGNIKASNVLINQDLDGC-ISDFGLTPLM--NVPATPSRSAGYRAP 507
V H H+ G H +IK N+LI+ + + DFG L+ V + Y P
Sbjct: 127 AVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPP 183
Query: 508 EVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVF 566
E I R H + V+S G+LL +M+ G P + E+
Sbjct: 184 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH---------------------DEEII 222
Query: 567 DVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEV 604
++ Q + E +++ C+A P RP +E+
Sbjct: 223 RGQVFFRQRVSSECQHLIR---WCLALRPSDRPTFEEI 257
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 86/213 (40%), Gaps = 37/213 (17%)
Query: 346 LGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFE-------QQMEIVGRVGQHPNVVP 398
LG+G+YG YKA+ T + E +++ ++ + QH N++
Sbjct: 42 LGEGTYGEVYKAI---DTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKEL-QHRNIIE 97
Query: 399 LRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRV--KILLGTARGVAHIH 456
L++ + L+++Y A L + N D RV L GV H
Sbjct: 98 LKSVIHHNHRLHLIFEY-AENDLKKYMDKNP-------DVSMRVIKSFLYQLINGVNFCH 149
Query: 457 SMGGPKFTHGNIKASNVLINQDLDGC------ISDFGLTPLMNVPATPSR----SAGYRA 506
S + H ++K N+L++ D I DFGL +P + YR
Sbjct: 150 SR---RCLHRDLKPQNLLLSVS-DASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRP 205
Query: 507 PEV-IETRKHSHKSDVYSFGVLLLEMLTGKAPL 538
PE+ + +R +S D++S + EML K PL
Sbjct: 206 PEILLGSRHYSTSVDIWSIACIWAEMLM-KTPL 237
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 85/204 (41%), Gaps = 21/204 (10%)
Query: 346 LGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFE----QQMEIVGRVG--QHPNVVPL 399
+G G+YGT YKA S +++ ++ R+ +HPNVV L
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 400 RAYYYSK--DEKL---LVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAH 454
+ D ++ LV+++ L T L G L ET ++ RG+
Sbjct: 72 MDVCATSRTDREIKVTLVFEH-VDQDLRTYLDKAPPPG---LPAETIKDLMRQFLRGLDF 127
Query: 455 IHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP---ATPSRSAGYRAPEVIE 511
+H+ H ++K N+L+ ++DFGL + + A + YRAPEV+
Sbjct: 128 LHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVVTLWYRAPEVLL 184
Query: 512 TRKHSHKSDVYSFGVLLLEMLTGK 535
++ D++S G + EM K
Sbjct: 185 QSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 62/158 (39%), Gaps = 31/158 (19%)
Query: 451 GVAHIHSMGGPKFTHGNIKASNVLINQDLDGC-ISDFGLTPLM--NVPATPSRSAGYRAP 507
V H H+ G H +IK N+LI+ + + DFG L+ V + Y P
Sbjct: 122 AVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPP 178
Query: 508 EVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVF 566
E I R H + V+S G+LL +M+ G P + E+
Sbjct: 179 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH---------------------DEEII 217
Query: 567 DVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEV 604
++ Q + E +++ C+A P RP +E+
Sbjct: 218 GGQVFFRQRVSSECQHLIR---WCLALRPSDRPTFEEI 252
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 62/158 (39%), Gaps = 31/158 (19%)
Query: 451 GVAHIHSMGGPKFTHGNIKASNVLINQDLDGC-ISDFGLTPLM--NVPATPSRSAGYRAP 507
V H H+ G H +IK N+LI+ + + DFG L+ V + Y P
Sbjct: 141 AVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPP 197
Query: 508 EVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVF 566
E I R H + V+S G+LL +M+ G P + E+
Sbjct: 198 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH---------------------DEEII 236
Query: 567 DVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEV 604
++ Q + E +++ C+A P RP +E+
Sbjct: 237 RGQVFFRQRVSSECQHLIR---WCLALRPSDRPTFEEI 271
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 62/158 (39%), Gaps = 31/158 (19%)
Query: 451 GVAHIHSMGGPKFTHGNIKASNVLINQDLDGC-ISDFGLTPLM--NVPATPSRSAGYRAP 507
V H H+ G H +IK N+LI+ + + DFG L+ V + Y P
Sbjct: 122 AVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPP 178
Query: 508 EVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVF 566
E I R H + V+S G+LL +M+ G P + E+
Sbjct: 179 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH---------------------DEEII 217
Query: 567 DVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEV 604
++ Q + E +++ C+A P RP +E+
Sbjct: 218 RGQVFFRQRVSSECQHLIR---WCLALRPSDRPTFEEI 252
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 62/158 (39%), Gaps = 31/158 (19%)
Query: 451 GVAHIHSMGGPKFTHGNIKASNVLINQDLDGC-ISDFGLTPLM--NVPATPSRSAGYRAP 507
V H H+ G H +IK N+LI+ + + DFG L+ V + Y P
Sbjct: 169 AVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPP 225
Query: 508 EVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVF 566
E I R H + V+S G+LL +M+ G P E E+
Sbjct: 226 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF---------------------EHDEEII 264
Query: 567 DVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEV 604
++ Q + E +++ C+A P RP +E+
Sbjct: 265 RGQVFFRQRVSSECQHLIR---WCLALRPSDRPTFEEI 299
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 62/158 (39%), Gaps = 31/158 (19%)
Query: 451 GVAHIHSMGGPKFTHGNIKASNVLINQDLDGC-ISDFGLTPLM--NVPATPSRSAGYRAP 507
V H H+ G H +IK N+LI+ + + DFG L+ V + Y P
Sbjct: 126 AVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPP 182
Query: 508 EVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVF 566
E I R H + V+S G+LL +M+ G P + E+
Sbjct: 183 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH---------------------DEEII 221
Query: 567 DVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEV 604
++ Q + E +++ C+A P RP +E+
Sbjct: 222 RGQVFFRQRVSSECQHLIR---WCLALRPSDRPTFEEI 256
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 62/158 (39%), Gaps = 31/158 (19%)
Query: 451 GVAHIHSMGGPKFTHGNIKASNVLINQDLDGC-ISDFGLTPLM--NVPATPSRSAGYRAP 507
V H H+ G H +IK N+LI+ + + DFG L+ V + Y P
Sbjct: 142 AVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPP 198
Query: 508 EVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVF 566
E I R H + V+S G+LL +M+ G P + E+
Sbjct: 199 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH---------------------DEEII 237
Query: 567 DVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEV 604
++ Q + E +++ C+A P RP +E+
Sbjct: 238 RGQVFFRQRVSSECQHLIR---WCLALRPSDRPTFEEI 272
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 62/158 (39%), Gaps = 31/158 (19%)
Query: 451 GVAHIHSMGGPKFTHGNIKASNVLINQDLDGC-ISDFGLTPLM--NVPATPSRSAGYRAP 507
V H H+ G H +IK N+LI+ + + DFG L+ V + Y P
Sbjct: 142 AVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPP 198
Query: 508 EVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVF 566
E I R H + V+S G+LL +M+ G P + E+
Sbjct: 199 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH---------------------DEEII 237
Query: 567 DVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEV 604
++ Q + E +++ C+A P RP +E+
Sbjct: 238 RGQVFFRQRVSXECQHLIR---WCLALRPSDRPTFEEI 272
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 62/158 (39%), Gaps = 31/158 (19%)
Query: 451 GVAHIHSMGGPKFTHGNIKASNVLINQDLDGC-ISDFGLTPLM--NVPATPSRSAGYRAP 507
V H H+ G H +IK N+LI+ + + DFG L+ V + Y P
Sbjct: 155 AVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPP 211
Query: 508 EVIE-TRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVF 566
E I R H + V+S G+LL +M+ G P E E+
Sbjct: 212 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF---------------------EHDEEII 250
Query: 567 DVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEV 604
++ Q + E +++ C+A P RP +E+
Sbjct: 251 GGQVFFRQRVSSECQHLIR---WCLALRPSDRPTFEEI 285
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 62/158 (39%), Gaps = 31/158 (19%)
Query: 451 GVAHIHSMGGPKFTHGNIKASNVLINQDLDGC-ISDFGLTPLM--NVPATPSRSAGYRAP 507
V H H+ G H +IK N+LI+ + + DFG L+ V + Y P
Sbjct: 154 AVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPP 210
Query: 508 EVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVF 566
E I R H + V+S G+LL +M+ G P E E+
Sbjct: 211 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF---------------------EHDEEII 249
Query: 567 DVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEV 604
++ Q + E +++ C+A P RP +E+
Sbjct: 250 GGQVFFRQRVSSECQHLIR---WCLALRPSDRPTFEEI 284
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 62/158 (39%), Gaps = 31/158 (19%)
Query: 451 GVAHIHSMGGPKFTHGNIKASNVLINQDLDGC-ISDFGLTPLM--NVPATPSRSAGYRAP 507
V H H+ G H +IK N+LI+ + + DFG L+ V + Y P
Sbjct: 154 AVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPP 210
Query: 508 EVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVF 566
E I R H + V+S G+LL +M+ G P + E+
Sbjct: 211 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH---------------------DEEII 249
Query: 567 DVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEV 604
++ Q + E +++ C+A P RP +E+
Sbjct: 250 GGQVFFRQRVSSECQHLIR---WCLALRPSDRPTFEEI 284
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 62/158 (39%), Gaps = 31/158 (19%)
Query: 451 GVAHIHSMGGPKFTHGNIKASNVLINQDLDGC-ISDFGLTPLM--NVPATPSRSAGYRAP 507
V H H+ G H +IK N+LI+ + + DFG L+ V + Y P
Sbjct: 125 AVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPP 181
Query: 508 EVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVF 566
E I R H + V+S G+LL +M+ G P + E+
Sbjct: 182 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH---------------------DEEII 220
Query: 567 DVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEV 604
++ Q + E +++ C+A P RP +E+
Sbjct: 221 RGQVFFRQRVSSECQHLIR---WCLALRPSDRPTFEEI 255
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 62/158 (39%), Gaps = 31/158 (19%)
Query: 451 GVAHIHSMGGPKFTHGNIKASNVLINQDLDGC-ISDFGLTPLM--NVPATPSRSAGYRAP 507
V H H+ G H +IK N+LI+ + + DFG L+ V + Y P
Sbjct: 122 AVRHCHNXG---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPP 178
Query: 508 EVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVF 566
E I R H + V+S G+LL +M+ G P + E+
Sbjct: 179 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH---------------------DEEII 217
Query: 567 DVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEV 604
++ Q + E +++ C+A P RP +E+
Sbjct: 218 RGQVFFRQRVSXECQHLIR---WCLALRPSDRPTFEEI 252
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 62/158 (39%), Gaps = 31/158 (19%)
Query: 451 GVAHIHSMGGPKFTHGNIKASNVLINQDLDGC-ISDFGLTPLM--NVPATPSRSAGYRAP 507
V H H+ G H +IK N+LI+ + + DFG L+ V + Y P
Sbjct: 127 AVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPP 183
Query: 508 EVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVF 566
E I R H + V+S G+LL +M+ G P + E+
Sbjct: 184 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH---------------------DEEII 222
Query: 567 DVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEV 604
++ Q + E +++ C+A P RP +E+
Sbjct: 223 RGQVFFRQRVSSECQHLIR---WCLALRPSDRPTFEEI 257
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 62/158 (39%), Gaps = 31/158 (19%)
Query: 451 GVAHIHSMGGPKFTHGNIKASNVLINQDLDGC-ISDFGLTPLM--NVPATPSRSAGYRAP 507
V H H+ G H +IK N+LI+ + + DFG L+ V + Y P
Sbjct: 155 AVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPP 211
Query: 508 EVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVF 566
E I R H + V+S G+LL +M+ G P E E+
Sbjct: 212 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF---------------------EHDEEII 250
Query: 567 DVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEV 604
++ Q + E +++ C+A P RP +E+
Sbjct: 251 GGQVFFRQRVSSECQHLIR---WCLALRPSDRPTFEEI 285
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 62/158 (39%), Gaps = 31/158 (19%)
Query: 451 GVAHIHSMGGPKFTHGNIKASNVLINQDLDGC-ISDFGLTPLM--NVPATPSRSAGYRAP 507
V H H+ G H +IK N+LI+ + + DFG L+ V + Y P
Sbjct: 126 AVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPP 182
Query: 508 EVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVF 566
E I R H + V+S G+LL +M+ G P + E+
Sbjct: 183 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH---------------------DEEII 221
Query: 567 DVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEV 604
++ Q + E +++ C+A P RP +E+
Sbjct: 222 RGQVFFRQRVSSECQHLIR---WCLALRPSDRPTFEEI 256
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 62/158 (39%), Gaps = 31/158 (19%)
Query: 451 GVAHIHSMGGPKFTHGNIKASNVLINQDLDGC-ISDFGLTPLM--NVPATPSRSAGYRAP 507
V H H+ G H +IK N+LI+ + + DFG L+ V + Y P
Sbjct: 127 AVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPP 183
Query: 508 EVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVF 566
E I R H + V+S G+LL +M+ G P + E+
Sbjct: 184 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH---------------------DEEII 222
Query: 567 DVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEV 604
++ Q + E +++ C+A P RP +E+
Sbjct: 223 RGQVFFRQRVSSECQHLIR---WCLALRPSDRPTFEEI 257
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 62/158 (39%), Gaps = 31/158 (19%)
Query: 451 GVAHIHSMGGPKFTHGNIKASNVLINQDLDGC-ISDFGLTPLM--NVPATPSRSAGYRAP 507
V H H+ G H +IK N+LI+ + + DFG L+ V + Y P
Sbjct: 141 AVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPP 197
Query: 508 EVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVF 566
E I R H + V+S G+LL +M+ G P + E+
Sbjct: 198 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH---------------------DEEII 236
Query: 567 DVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEV 604
++ Q + E +++ C+A P RP +E+
Sbjct: 237 RGQVFFRQRVSXECQHLIR---WCLALRPSDRPTFEEI 271
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 62/158 (39%), Gaps = 31/158 (19%)
Query: 451 GVAHIHSMGGPKFTHGNIKASNVLINQDLDGC-ISDFGLTPLM--NVPATPSRSAGYRAP 507
V H H+ G H +IK N+LI+ + + DFG L+ V + Y P
Sbjct: 155 AVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPP 211
Query: 508 EVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVF 566
E I R H + V+S G+LL +M+ G P + E+
Sbjct: 212 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH---------------------DEEII 250
Query: 567 DVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEV 604
++ Q + E +++ C+A P RP +E+
Sbjct: 251 GGQVFFRQRVSXECQHLIR---WCLALRPSDRPTFEEI 285
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 62/158 (39%), Gaps = 31/158 (19%)
Query: 451 GVAHIHSMGGPKFTHGNIKASNVLINQDLDGC-ISDFGLTPLM--NVPATPSRSAGYRAP 507
V H H+ G H +IK N+LI+ + + DFG L+ V + Y P
Sbjct: 155 AVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPP 211
Query: 508 EVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVF 566
E I R H + V+S G+LL +M+ G P E E+
Sbjct: 212 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF---------------------EHDEEII 250
Query: 567 DVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEV 604
++ Q + E +++ C+A P RP +E+
Sbjct: 251 GGQVFFRQRVSXECQHLIR---WCLALRPSDRPTFEEI 285
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 62/158 (39%), Gaps = 31/158 (19%)
Query: 451 GVAHIHSMGGPKFTHGNIKASNVLINQDLDGC-ISDFGLTPLM--NVPATPSRSAGYRAP 507
V H H+ G H +IK N+LI+ + + DFG L+ V + Y P
Sbjct: 154 AVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPP 210
Query: 508 EVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVF 566
E I R H + V+S G+LL +M+ G P E E+
Sbjct: 211 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF---------------------EHDEEII 249
Query: 567 DVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEV 604
++ Q + E +++ C+A P RP +E+
Sbjct: 250 RGQVFFRQRVSSECQHLIR---WCLALRPSDRPTFEEI 284
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 62/158 (39%), Gaps = 31/158 (19%)
Query: 451 GVAHIHSMGGPKFTHGNIKASNVLINQDLDGC-ISDFGLTPLM--NVPATPSRSAGYRAP 507
V H H+ G H +IK N+LI+ + + DFG L+ V + Y P
Sbjct: 169 AVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPP 225
Query: 508 EVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVF 566
E I R H + V+S G+LL +M+ G P E E+
Sbjct: 226 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF---------------------EHDEEII 264
Query: 567 DVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEV 604
++ Q + E +++ C+A P RP +E+
Sbjct: 265 RGQVFFRQRVSXECQHLIR---WCLALRPSDRPTFEEI 299
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 62/158 (39%), Gaps = 31/158 (19%)
Query: 451 GVAHIHSMGGPKFTHGNIKASNVLINQDLDGC-ISDFGLTPLM--NVPATPSRSAGYRAP 507
V H H+ G H +IK N+LI+ + + DFG L+ V + Y P
Sbjct: 154 AVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPP 210
Query: 508 EVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVF 566
E I R H + V+S G+LL +M+ G P + E+
Sbjct: 211 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH---------------------DEEII 249
Query: 567 DVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEV 604
++ Q + E +++ C+A P RP +E+
Sbjct: 250 GGQVFFRQRVSXECQHLIR---WCLALRPSDRPTFEEI 284
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 62/158 (39%), Gaps = 31/158 (19%)
Query: 451 GVAHIHSMGGPKFTHGNIKASNVLINQDLDGC-ISDFGLTPLM--NVPATPSRSAGYRAP 507
V H H+ G H +IK N+LI+ + + DFG L+ V + Y P
Sbjct: 161 AVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPP 217
Query: 508 EVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVF 566
E I R H + V+S G+LL +M+ G P + E+
Sbjct: 218 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH---------------------DEEII 256
Query: 567 DVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEV 604
++ Q + E +++ C+A P RP +E+
Sbjct: 257 RGQVFFRQRVSSECQHLIR---WCLALRPSDRPTFEEI 291
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 62/158 (39%), Gaps = 31/158 (19%)
Query: 451 GVAHIHSMGGPKFTHGNIKASNVLINQDLDGC-ISDFGLTPLM--NVPATPSRSAGYRAP 507
V H H+ G H +IK N+LI+ + + DFG L+ V + Y P
Sbjct: 149 AVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPP 205
Query: 508 EVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVF 566
E I R H + V+S G+LL +M+ G P + E+
Sbjct: 206 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH---------------------DEEII 244
Query: 567 DVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEV 604
++ Q + E +++ C+A P RP +E+
Sbjct: 245 RGQVFFRQRVSXECQHLIR---WCLALRPSDRPTFEEI 279
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 62/158 (39%), Gaps = 31/158 (19%)
Query: 451 GVAHIHSMGGPKFTHGNIKASNVLINQDLDGC-ISDFGLTPLM--NVPATPSRSAGYRAP 507
V H H+ G H +IK N+LI+ + + DFG L+ V + Y P
Sbjct: 142 AVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPP 198
Query: 508 EVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVF 566
E I R H + V+S G+LL +M+ G P + E+
Sbjct: 199 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH---------------------DEEII 237
Query: 567 DVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEV 604
++ Q + E +++ C+A P RP +E+
Sbjct: 238 RGQVFFRQRVSXECQHLIR---WCLALRPXDRPTFEEI 272
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 462 KFTHGNIKASNVLINQDLDGCIS--DFGLTPLMNVPATPS-RSAGYRAPEVIETRKHSHK 518
+ H ++K N+L+ Q I DFG + + +S YRAPEVI ++
Sbjct: 220 RIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYXXIQSRFYRAPEVILGARYGMP 279
Query: 519 SDVYSFGVLLLEMLTG 534
D++S G +L E+LTG
Sbjct: 280 IDMWSLGCILAELLTG 295
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 62/158 (39%), Gaps = 31/158 (19%)
Query: 451 GVAHIHSMGGPKFTHGNIKASNVLINQDLDGC-ISDFGLTPLM--NVPATPSRSAGYRAP 507
V H H+ G H +IK N+LI+ + + DFG L+ V + Y P
Sbjct: 169 AVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPP 225
Query: 508 EVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVF 566
E I R H + V+S G+LL +M+ G P + E+
Sbjct: 226 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH---------------------DEEII 264
Query: 567 DVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEV 604
++ Q + E +++ C+A P RP +E+
Sbjct: 265 RGQVFFRQRVSSECQHLIR---WCLALRPSDRPTFEEI 299
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 93/218 (42%), Gaps = 40/218 (18%)
Query: 344 EVLGKGSYGT-AYKAVLEESTTXXXXXXXXXXXXXRDFEQQMEIVGRVGQHPNVVPLRAY 402
+VLG G+ GT Y+ + + +++++++ +HPNV+ R +
Sbjct: 30 DVLGHGAEGTIVYRGMFDNRDVAVKRILPECFSFA---DREVQLLRESDEHPNVI--RYF 84
Query: 403 YYSKDEKLLVYDYFA----SGSLSTLLHGNRGA--GRTPLDWETRVKILLGTARGVAHIH 456
KD + + Y A + +L + A G P + +L T G+AH+H
Sbjct: 85 CTEKDRQ---FQYIAIELCAATLQEYVEQKDFAHLGLEP------ITLLQQTTSGLAHLH 135
Query: 457 SMGGPKFTHGNIKASNVLINQ-----DLDGCISDFGLTPLMNV--PATPSRSA-----GY 504
S+ H ++K N+LI+ + ISDFGL + V + RS G+
Sbjct: 136 SLN---IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGW 192
Query: 505 RAPEVIE---TRKHSHKSDVYSFGVLLLEMLT-GKAPL 538
APE++ ++ D++S G + +++ G P
Sbjct: 193 IAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPF 230
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 62/158 (39%), Gaps = 31/158 (19%)
Query: 451 GVAHIHSMGGPKFTHGNIKASNVLINQDLDGC-ISDFGLTPLM--NVPATPSRSAGYRAP 507
V H H+ G H +IK N+LI+ + + DFG L+ V + Y P
Sbjct: 174 AVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPP 230
Query: 508 EVIE-TRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVF 566
E I R H + V+S G+LL +M+ G P E E+
Sbjct: 231 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF---------------------EHDEEII 269
Query: 567 DVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEV 604
++ Q + E +++ C+A P RP +E+
Sbjct: 270 RGQVFFRQRVSXECQHLIR---WCLALRPSDRPTFEEI 304
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 97/247 (39%), Gaps = 66/247 (26%)
Query: 344 EVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFE---------QQMEIVGRVGQ-- 392
++G+GSYG Y A + + R FE +++ I+ R+
Sbjct: 34 HLIGRGSYGYVYLAYDKNANKNVAIKKVN-----RMFEDLIDCKRILREITILNRLKSDY 88
Query: 393 ----HPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDW-ETRVK-ILL 446
H ++P + DE +V + A L L +TP+ E VK IL
Sbjct: 89 IIRLHDLIIPEDLLKF--DELYIVLE-IADSDLKKLF-------KTPIFLTEQHVKTILY 138
Query: 447 GTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN------------- 493
G IH G H ++K +N L+NQD I DFGL +N
Sbjct: 139 NLLLGEKFIHESG---IIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEE 195
Query: 494 -----VPATPSR-----------SAGYRAPEVIETRK-HSHKSDVYSFGVLLLEMLT-GK 535
P ++ + YRAPE+I ++ +++ D++S G + E+L K
Sbjct: 196 KEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMK 255
Query: 536 APLQSPT 542
+ + +PT
Sbjct: 256 SHINNPT 262
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 108/248 (43%), Gaps = 37/248 (14%)
Query: 343 AEVLGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRD---FEQQMEIVGRVGQHPNVVPL 399
AE LG+G +G ++ V E+++ D ++++ I+ + +H N++ L
Sbjct: 10 AEDLGRGEFGIVHRCV--ETSSKKTYMAKFVKVKGTDQVLVKKEISILN-IARHRNILHL 66
Query: 400 RAYYYSKDEKLLVYDYFASGSLSTLLHGNRGA----GRTPLDWETRVKILLGTARGVAHI 455
+ S +E +++++ F SG L N A R + + +V A H
Sbjct: 67 HESFESMEELVMIFE-FISG-LDIFERINTSAFELNEREIVSYVHQV----CEALQFLHS 120
Query: 456 HSMGGPKFTHGNIKASNVLINQDLDGCIS--DFGLTPLMNVPATPSR----SAGYRAPEV 509
H++G H +I+ N++ I +FG + P R + Y APEV
Sbjct: 121 HNIG-----HFDIRPENIIYQTRRSSTIKIIEFGQARQLK-PGDNFRLLFTAPEYYAPEV 174
Query: 510 IETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVE 569
+ S +D++S G L+ +L+G P + T +++ +++ E+T FD E
Sbjct: 175 HQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIE------NIMNAEYT---FDEE 225
Query: 570 LMRFQNIE 577
+ +IE
Sbjct: 226 AFKEISIE 233
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 74/183 (40%), Gaps = 16/183 (8%)
Query: 379 DFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDW 438
DF + I+ ++ H N+V + ++ + A G L + L R P
Sbjct: 94 DFLMEALIISKL-NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS- 151
Query: 439 ETRVKILLGTARGVA-HIHSMGGPKFTHGNIKASNVLINQDLDG---CISDFGLTPLMNV 494
+ LL AR +A + F H +I A N L+ G I DFG+ +
Sbjct: 152 -LAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI-Y 209
Query: 495 PATPSRSAG-------YRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDM 546
A+ R G + PE + K+D +SFGVLL E+ + G P S + ++
Sbjct: 210 RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEV 269
Query: 547 VDL 549
++
Sbjct: 270 LEF 272
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 87/207 (42%), Gaps = 24/207 (11%)
Query: 346 LGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFE-------QQMEIVGRVG--QHPNV 396
+G G+YGT YKA S +++ ++ R+ +HPNV
Sbjct: 17 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNV 76
Query: 397 VPLRAYYYSK--DEKL---LVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARG 451
V L + D ++ LV+++ L T L G L ET ++ RG
Sbjct: 77 VRLMDVCATSRTDREIKVTLVFEH-VDQDLRTYLDKAPPPG---LPAETIKDLMRQFLRG 132
Query: 452 VAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN--VPATPSR-SAGYRAPE 508
+ +H+ H ++K N+L+ ++DFGL + + + TP + YRAPE
Sbjct: 133 LDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVVTLWYRAPE 189
Query: 509 VIETRKHSHKSDVYSFGVLLLEMLTGK 535
V+ ++ D++S G + EM K
Sbjct: 190 VLLQSTYATPVDMWSVGCIFAEMFRRK 216
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 66/152 (43%), Gaps = 21/152 (13%)
Query: 394 PNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGR--TPLDWETRVKILLGTARG 451
P +V L + +V +Y A G + + L R GR P +I+L
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFSEPHARFYAAQIVLT---- 153
Query: 452 VAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN-----VPATPSRSAGYRA 506
++HS+ + ++K N+LI+Q ++DFG + + TP A
Sbjct: 154 FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEA----LA 206
Query: 507 PEVIETRKHSHKSDVYSFGVLLLEMLTGKAPL 538
PE+I ++ ++ D ++ GVL+ EM G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 84/204 (41%), Gaps = 21/204 (10%)
Query: 346 LGKGSYGTAYKAVLEESTTXXXXXXXXXXXXXRDFE----QQMEIVGRVG--QHPNVVPL 399
+G G+YGT YKA S +++ ++ R+ +HPNVV L
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 400 RAYYYSK--DEKL---LVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAH 454
+ D ++ LV+++ L T L G L ET ++ RG+
Sbjct: 72 MDVCATSRTDREIKVTLVFEH-VDQDLRTYLDKAPPPG---LPAETIKDLMRQFLRGLDF 127
Query: 455 IHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR---SAGYRAPEVIE 511
+H+ H ++K N+L+ ++DFGL + + + YRAPEV+
Sbjct: 128 LHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVVTLWYRAPEVLL 184
Query: 512 TRKHSHKSDVYSFGVLLLEMLTGK 535
++ D++S G + EM K
Sbjct: 185 QSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 74/183 (40%), Gaps = 16/183 (8%)
Query: 379 DFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDW 438
DF + I+ ++ H N+V + ++ + A G L + L R P
Sbjct: 80 DFLMEALIISKL-NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS- 137
Query: 439 ETRVKILLGTARGVA-HIHSMGGPKFTHGNIKASNVLINQDLDG---CISDFGLTPLMNV 494
+ LL AR +A + F H +I A N L+ G I DFG+ +
Sbjct: 138 -LAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI-Y 195
Query: 495 PATPSRSAG-------YRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDM 546
A+ R G + PE + K+D +SFGVLL E+ + G P S + ++
Sbjct: 196 RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEV 255
Query: 547 VDL 549
++
Sbjct: 256 LEF 258
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.134 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,338,308
Number of Sequences: 62578
Number of extensions: 692855
Number of successful extensions: 3910
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 599
Number of HSP's successfully gapped in prelim test: 449
Number of HSP's that attempted gapping in prelim test: 2071
Number of HSP's gapped (non-prelim): 1214
length of query: 635
length of database: 14,973,337
effective HSP length: 105
effective length of query: 530
effective length of database: 8,402,647
effective search space: 4453402910
effective search space used: 4453402910
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 54 (25.4 bits)